Query 007643
Match_columns 595
No_of_seqs 179 out of 1496
Neff 7.0
Searched_HMMs 46136
Date Thu Mar 28 13:24:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007643.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007643hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03167 Chaperonin-60 beta su 100.0 8E-117 2E-121 987.1 55.4 587 1-595 1-600 (600)
2 PRK12850 groEL chaperonin GroE 100.0 9E-109 2E-113 917.6 54.6 526 61-592 1-540 (544)
3 PRK00013 groEL chaperonin GroE 100.0 1E-108 3E-113 914.8 55.3 526 62-594 1-540 (542)
4 PRK12852 groEL chaperonin GroE 100.0 4E-108 9E-113 913.7 56.0 528 61-592 1-544 (545)
5 PRK12849 groEL chaperonin GroE 100.0 7E-108 2E-112 909.1 56.2 526 62-592 1-540 (542)
6 PRK14104 chaperonin GroEL; Pro 100.0 4E-106 8E-111 896.0 55.1 526 63-592 3-542 (546)
7 PRK12851 groEL chaperonin GroE 100.0 3E-106 8E-111 896.3 54.7 516 61-581 1-530 (541)
8 PTZ00114 Heat shock protein 60 100.0 6E-105 1E-109 889.3 53.8 515 61-578 12-543 (555)
9 CHL00093 groEL chaperonin GroE 100.0 6E-105 1E-109 885.8 53.2 511 62-577 1-527 (529)
10 TIGR02348 GroEL chaperonin Gro 100.0 1E-104 3E-109 882.4 53.7 508 64-576 2-523 (524)
11 cd03344 GroEL GroEL_like type 100.0 4E-103 8E-108 868.9 52.8 505 64-573 1-519 (520)
12 KOG0356 Mitochondrial chaperon 100.0 1.5E-99 3E-104 799.4 37.9 511 63-579 16-541 (550)
13 TIGR02339 thermosome_arch ther 100.0 1.8E-86 3.9E-91 738.7 47.5 451 72-573 15-518 (519)
14 cd03343 cpn60 cpn60 chaperonin 100.0 2.8E-86 6E-91 737.5 47.8 456 66-574 10-516 (517)
15 cd03335 TCP1_alpha TCP-1 (CTT 100.0 2.8E-86 6.1E-91 738.1 46.2 459 72-576 7-527 (527)
16 cd03342 TCP1_zeta TCP-1 (CTT o 100.0 1.5E-86 3.2E-91 732.5 42.8 447 72-575 11-483 (484)
17 TIGR02347 chap_CCT_zeta T-comp 100.0 6.8E-86 1.5E-90 733.4 47.6 455 72-577 15-528 (531)
18 TIGR02340 chap_CCT_alpha T-com 100.0 1.9E-85 4.1E-90 732.4 46.7 459 72-576 11-531 (536)
19 cd03339 TCP1_epsilon TCP-1 (CT 100.0 2.2E-85 4.8E-90 730.7 46.2 456 65-573 17-526 (526)
20 COG0459 GroL Chaperonin GroEL 100.0 6.8E-87 1.5E-91 733.2 32.5 487 62-579 2-518 (524)
21 cd03340 TCP1_eta TCP-1 (CTT or 100.0 6.8E-85 1.5E-89 726.6 47.7 456 72-575 15-520 (522)
22 cd03338 TCP1_delta TCP-1 (CTT 100.0 4.2E-85 9E-90 727.5 45.7 458 72-574 7-515 (515)
23 KOG0361 Chaperonin complex com 100.0 2.1E-86 4.5E-91 669.6 30.2 462 72-581 19-529 (543)
24 TIGR02344 chap_CCT_gamma T-com 100.0 1.3E-84 2.8E-89 724.7 46.5 454 72-576 15-523 (525)
25 TIGR02343 chap_CCT_epsi T-comp 100.0 3.6E-84 7.8E-89 720.7 47.0 452 72-574 26-531 (532)
26 TIGR02342 chap_CCT_delta T-com 100.0 2.9E-84 6.4E-89 720.0 45.7 458 72-574 8-516 (517)
27 TIGR02345 chap_CCT_eta T-compl 100.0 4.8E-84 1E-88 719.0 46.7 455 72-575 17-520 (522)
28 cd03336 TCP1_beta TCP-1 (CTT o 100.0 1.2E-83 2.6E-88 715.2 49.4 453 72-576 12-515 (517)
29 PTZ00212 T-complex protein 1 s 100.0 9.2E-84 2E-88 718.0 48.6 456 72-579 21-530 (533)
30 TIGR02346 chap_CCT_theta T-com 100.0 3.1E-84 6.7E-89 721.1 42.5 460 72-584 17-529 (531)
31 cd03337 TCP1_gamma TCP-1 (CTT 100.0 5.7E-83 1.2E-87 703.8 42.0 434 72-573 15-479 (480)
32 TIGR02341 chap_CCT_beta T-comp 100.0 5.8E-82 1.3E-86 701.1 49.3 454 72-577 13-517 (519)
33 cd03341 TCP1_theta TCP-1 (CTT 100.0 1.3E-81 2.8E-86 691.7 43.5 437 71-574 6-471 (472)
34 cd00309 chaperonin_type_I_II c 100.0 3.1E-81 6.7E-86 688.7 45.9 439 65-573 2-464 (464)
35 PF00118 Cpn60_TCP1: TCP-1/cpn 100.0 2.1E-75 4.5E-80 645.5 40.9 441 85-576 1-485 (485)
36 KOG0358 Chaperonin complex com 100.0 7.8E-74 1.7E-78 577.5 28.3 453 72-574 25-533 (534)
37 KOG0363 Chaperonin complex com 100.0 3.4E-73 7.5E-78 570.4 29.6 457 72-580 17-524 (527)
38 KOG0362 Chaperonin complex com 100.0 9.9E-68 2.1E-72 550.1 36.9 462 70-583 23-529 (537)
39 KOG0360 Chaperonin complex com 100.0 1.5E-67 3.3E-72 545.2 23.8 463 72-581 18-542 (545)
40 KOG0364 Chaperonin complex com 100.0 1.2E-63 2.6E-68 511.9 19.8 453 75-578 21-524 (527)
41 KOG0359 Chaperonin complex com 100.0 2E-59 4.4E-64 480.2 20.8 450 74-574 18-514 (520)
42 KOG0357 Chaperonin complex com 100.0 1.9E-56 4.2E-61 446.4 16.8 374 57-576 14-397 (400)
43 cd03333 chaperonin_like chaper 99.9 5.6E-22 1.2E-26 196.1 17.8 191 204-457 3-209 (209)
44 cd03334 Fab1_TCP TCP-1 like do 99.9 4.1E-21 9E-26 196.0 16.4 198 215-458 19-254 (261)
45 KOG0230 Phosphatidylinositol-4 98.6 1.2E-07 2.7E-12 111.9 11.3 163 216-402 334-533 (1598)
46 COG0459 GroL Chaperonin GroEL 97.3 0.00096 2.1E-08 74.9 9.2 89 295-399 260-355 (524)
47 TIGR02345 chap_CCT_eta T-compl 42.4 9.3 0.0002 43.3 0.4 61 304-365 246-315 (522)
48 PF03102 NeuB: NeuB family; I 30.7 1.6E+02 0.0035 29.9 7.1 64 295-361 103-175 (241)
49 PRK13600 putative ribosomal pr 28.4 2.6E+02 0.0056 23.7 6.8 54 297-360 21-74 (84)
50 COG2089 SpsE Sialic acid synth 23.9 3.2E+02 0.007 29.1 7.9 64 295-361 137-209 (347)
51 smart00574 POX domain associat 20.8 2.4E+02 0.0051 26.3 5.5 38 442-479 91-129 (140)
No 1
>PLN03167 Chaperonin-60 beta subunit; Provisional
Probab=100.00 E-value=8.5e-117 Score=987.08 Aligned_cols=587 Identities=91% Similarity=1.261 Sum_probs=554.9
Q ss_pred CcccccccccccccccCCCcccchhccccccccccccccccccccccccccccccCccccccccccccCCcHHHHHHHHH
Q 007643 1 MASTFTAMSSISSMIAPNGRMTDKKLASSSNKLSSLASISSSSFGRRQSVALRRARTPKIYAAKDLHFNKDGYAMKKLQN 80 (595)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~f~~~~~~~~~~~~ 80 (595)
|||++.+.++.++..++... ++.+.++|...++..+|+++++.+.|++..+++.|+|+++||.+.++|+.+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ar~~l~~ 73 (600)
T PLN03167 1 MASTFTATSSVGSLAAPNGH-------KSDNRLSSFASISSSSFGRRQSVRLRRSRSPKVKAAKELHFNKDGSAIKKLQA 73 (600)
T ss_pred CcchhhhhhhhcCccccccc-------ccccccccccccccccccccccccccccCCchhhhcceeecCCcHHHHHHHHH
Confidence 78898888888888877544 55577888888999999877777777777788888999999932279999999
Q ss_pred HHHHHHHhhhhccCcCCCceeeecCCCCcEEecChHHHhccccccCccchHHHHHHHHHHHhcccccCCCcchHHHHHHH
Q 007643 81 GVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQG 160 (595)
Q Consensus 81 ~v~~la~~v~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~l~l~hP~enigakLl~~~a~~qd~~~GDGTTt~vvLa~~ 160 (595)
||..|+++|++||||+||+|||++++|+|+|||||+||+|+|+++||++|+||+|++++|++||+++||||||+|||+++
T Consensus 74 g~~~la~~vktTLGP~G~~kmi~~~~G~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~qd~evGDGTTTvvVLa~~ 153 (600)
T PLN03167 74 GVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQG 153 (600)
T ss_pred HHHHHHHHHhccCCCCCCCEEEECCCCCeeEeccHHHHHHHcccCCchhhHHHHHHHHHHHhhhhhhCCCccHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHcccccCCchHHHHHHhhhcCChhHHHHHHHHHHHhhccCCcEEeeC
Q 007643 161 LIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLEE 240 (595)
Q Consensus 161 Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~L~~va~ts~~~~~~ls~li~~Av~~v~~~g~I~v~~ 240 (595)
||+++.+++++|+||..|++||++|.+.++++|+++++++++.+|.++|++|+++++.|++|+++|+.+++++|.|.+++
T Consensus 154 LL~ea~~li~~Gi~P~~I~~G~~~A~~~~~~~L~~~s~~v~d~~L~~vA~tS~~~~~~i~~liaeAv~~Vg~~g~i~v~~ 233 (600)
T PLN03167 154 LIAEGVKVVAAGANPVQITRGIEKTAKALVKELKKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLEE 233 (600)
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHhccCcHHHHHHHHHHHHHhccCCcEEecc
Confidence 99999999999999999999999999999999999999997558999999999999999999999999999989999999
Q ss_pred CCcccceeEEEeeeEEeecccCCccccCcccCcccccCeeEEEecccCCCHHHHHHHHHHHHHcCCCEEEEeccccHHHH
Q 007643 241 GKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEAL 320 (595)
Q Consensus 241 G~~~~ds~~li~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~~~~~i~~~le~i~~~g~~lvIi~~~i~~~aL 320 (595)
|++++|++++++|++|+++|.+|||++++++|+++++||+|+++|++|++++++.++++.+.+.|+||||++++|++++|
T Consensus 234 g~s~~dsl~~v~G~~~d~g~~spyfvt~~~~m~~~l~np~Ill~d~~i~~~~~l~~~le~i~~~g~~lvI~a~~I~~~aL 313 (600)
T PLN03167 234 GKSAENNLYVVEGMQFDRGYISPYFVTDSEKMSVEYDNCKLLLVDKKITNARDLIGILEDAIRGGYPLLIIAEDIEQEAL 313 (600)
T ss_pred CCCccceeEEEEEEEecCCccCcccccCcCCCeEEEeCCEEEEEccccCCHHHHHHHHHHHHHhCcCEEEEcCCCCHHHH
Confidence 99999998999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcccceeEEeeCCCcccchhhhHHHHHHHhCCeEeecCCCccccCCCCCCceeeeEEEEecCeEEEEccCCCc
Q 007643 321 ATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQ 400 (595)
Q Consensus 321 ~~L~~n~~~g~~~i~av~~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i~~~~~~ii~~~~~~ 400 (595)
++|+.|+++|..+++|||+|+||+.++++|+|||++|||++++++.+++++++++++||+|++|++.+++++++.+.+++
T Consensus 314 ~~L~~nkl~g~~~i~aVk~p~~g~~~~~~L~dia~~tGa~~i~~~~~~~l~~~~~~~LG~a~~v~~~~~~t~iig~~~~~ 393 (600)
T PLN03167 314 ATLVVNKLRGSLKIAALKAPGFGERKSQYLDDIAILTGGTVIREEVGLSLDKVGKEVLGTAAKVVLTKDTTTIVGDGSTQ 393 (600)
T ss_pred HHHHHhhccccceEEEEEcccCCcchHHHHHHHHHhhCCEEecccccCCcccCCHHHCceeeEEEEecccceeeCCCccH
Confidence 99999999999999999999999999999999999999999998888889999999999999999999999999988888
Q ss_pred hhhhhHHHHHHHHHHhhchHHHHHHHHHHHHHhcCcHHHHH-------------HHHHHHHHHHHHHHHcCccccchHHH
Q 007643 401 DAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQ-------------LRVEDALNATKAAVEEGIVVGGGCTL 467 (595)
Q Consensus 401 ~~i~~r~~~lr~~l~~~~~~~~~e~L~ERi~~l~gg~a~i~-------------~~i~Dal~~~k~al~~gvVpGGGa~e 467 (595)
+.++.|+.+|++.++.++++|++++|+|||++|+|++++|+ |+++||++++|+++++|+|||||++|
T Consensus 394 ~~i~~r~~~i~~~~~~~~~~~~~~~l~~Ri~~l~g~~aiI~vgG~t~~~l~E~er~i~DAl~avk~ai~~gvVpGGGa~e 473 (600)
T PLN03167 394 EAVNKRVAQIKNLIEAAEQDYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTL 473 (600)
T ss_pred HHHHHHHHHHHhhhhccCCHHHHHHHHHHHhhcCCcEEEEEecCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHH
Confidence 99999999999998888999999999999999999977653 99999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCchhHHHHHHHHHHHHhHHHHHHHHhcCCchHHHHHHhhhcCCCceeeecCCCccccccccCcccc
Q 007643 468 LRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDP 547 (595)
Q Consensus 468 ~~ls~~L~~~~~~~~~~~q~~~i~~~a~AL~~ip~~L~~NaG~d~~~vi~kl~~~~~~~~Gid~~~g~i~d~~~~gI~Dp 547 (595)
++++.+|++++.+.++.+|+.+++++++||+.||++||+|||+|+.+++.+|+..+++++|||+.+|++.||++.|||||
T Consensus 474 l~ls~~L~~~~~~~~~~eq~~g~~~~~~Al~~p~r~La~NAG~d~~~vv~~L~~~~~~~~G~d~~~g~~~dm~~~GI~Dp 553 (600)
T PLN03167 474 LRLASKVDAIKDTLENDEQKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSNDNPKFGYNAATGKYEDLMAAGIIDP 553 (600)
T ss_pred HHHHHHHHHHHhcCCChhHHHHHHHHHHHHhcchhhhhhcCCCCHHHHHHHHHhcCCCCEeEeCCCCcCcchHhccCeec
Confidence 99999999998777888898889999999999999999999999999999998666778999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhchhHHhhccCCCCCCCCCCCCCCCCCCCC
Q 007643 548 TKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYGY 595 (595)
Q Consensus 548 ~~vk~~al~~A~e~a~~iL~iD~iI~~~~~~~~~~~~~~~~~~~~~~~ 595 (595)
+.||+++|++|+++|++||+||++|+.+|+++|. ++++||+++||||
T Consensus 554 ~~Vk~~al~~A~~~A~~iL~iD~iI~~~~~~~~~-~~~~~~~~~~~~~ 600 (600)
T PLN03167 554 TKVVRCCLEHAASVAKTFLTSDCVVVEIKEPEPV-PAGNPMDNSGYGY 600 (600)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC-CCCCCCCCCCCCC
Confidence 9999999999999999999999999998777665 6888999999997
No 2
>PRK12850 groEL chaperonin GroEL; Reviewed
Probab=100.00 E-value=9e-109 Score=917.55 Aligned_cols=526 Identities=54% Similarity=0.836 Sum_probs=496.6
Q ss_pred ccccccccCCcHHHHHHHHHHHHHHHHhhhhccCcCCCceeeecCCCCcEEecChHHHhccccccCccchHHHHHHHHHH
Q 007643 61 YAAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAA 140 (595)
Q Consensus 61 ~~~k~~~f~~~~~~~~~~~~~v~~la~~v~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~l~l~hP~enigakLl~~~a 140 (595)
||+|.++|+ +++|+.+++|+..|+++|+|||||+||+|||+++.|+++|||||+||+++|+++||++|+||+|++++|
T Consensus 1 ~~~~~~~~~--~~a~~~~~~~~~~la~~v~tTLGP~G~~kmi~~~~G~~~ITnDG~tIlk~i~i~hp~~~~ga~ll~~~a 78 (544)
T PRK12850 1 MAAKEIRFS--TDARDRLLRGVNILANAVKVTLGPKGRNVVLEKSFGAPRITKDGVTVAKEIELEDKFENMGAQMVKEVA 78 (544)
T ss_pred CCcceeccc--HHHHHHHHHHHHHHHHHHhCCcCCCCCCEEEECCCCCeeEeccHHHHHHHhcCCChhhhHHHHHHHHHH
Confidence 368999999 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcccccCCCcchHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHcccccCCch-HHHHHHhhhcCChhHH
Q 007643 141 AKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEV 219 (595)
Q Consensus 141 ~~qd~~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~-~L~~va~ts~~~~~~l 219 (595)
++||+++||||||+|+|+++||+++.+++++|+||..|++||+.|++.++++|+++++++++. +|.++|++|+++++.|
T Consensus 79 ~~qd~e~GDGTTt~viLa~~LL~~a~~li~~GihP~~I~~G~~~a~~~~~~~L~~~s~~v~~~~~l~~va~~s~~~~~~l 158 (544)
T PRK12850 79 SKTNDLAGDGTTTATVLAQAIVREGAKLVAAGMNPMDLKRGIDLAVAAVVDELKKIAKKVTSSKEIAQVATISANGDESI 158 (544)
T ss_pred hhhcchhcCCcchHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCCHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999866 8999999999999999
Q ss_pred HHHHHHHHHhhccCCcEEeeCCCcccceeEEEeeeEEeecccCCccccCcccCcccccCeeEEEecccCCCHHHHHHHHH
Q 007643 220 GNMIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLE 299 (595)
Q Consensus 220 s~li~~Av~~v~~~g~I~v~~G~~~~ds~~li~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~~~~~i~~~le 299 (595)
++++++|+..++++|.|.++.+....+++++++|++|+++|.+|||+++.++|+.+++||+|+++|+++++.+++.++++
T Consensus 159 ~~lv~eAv~~vg~~g~i~v~~~~~~g~~~~~v~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~~~~~i~~~l~ 238 (544)
T PRK12850 159 GEMIAEAMDKVGKEGVITVEEAKTLGTELDVVEGMQFDRGYLSPYFVTNPEKMRAELEDPYILLHEKKISNLQDLLPILE 238 (544)
T ss_pred HHHHHHHHHHhcccCceeeEEccccCcceEEEEeEEecCccCcCccccccccCeEEEeCCEEEEEecccCCHHHHHHHHH
Confidence 99999999999988888776665555666999999999999999999988899999999999999999999999999999
Q ss_pred HHHHcCCCEEEEeccccHHHHHHHHHHhhcccceeEEeeCCCcccchhhhHHHHHHHhCCeEeecCCCccccCCCCCCce
Q 007643 300 DAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLG 379 (595)
Q Consensus 300 ~i~~~g~~lvIi~~~i~~~aL~~L~~n~~~g~~~i~av~~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG 379 (595)
.+.+.|+||||++++|+++++++|+.|+++|.++++|||+|+||++++++|+|||++|||++++++.+++++++++++||
T Consensus 239 ~i~~~g~~lvI~~~~I~d~al~~l~~n~i~~~~~~~avk~p~~g~~~~~~le~ia~~tG~~~i~~~~~~~~~~~~~~~LG 318 (544)
T PRK12850 239 AVVQSGRPLLIIAEDVEGEALATLVVNKLRGGLKSVAVKAPGFGDRRKAMLEDIAVLTGGQVISEDLGIKLENVTLDMLG 318 (544)
T ss_pred HHHHhCCCEEEECCCCChHHHHHHHHcCCcccceEEEEeCCCcCcccHHHHHHHHHHhCCEEeccccCCCcccCCHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999998888889999999999
Q ss_pred eeeEEEEecCeEEEEccCCCchhhhhHHHHHHHHHHhhchHHHHHHHHHHHHHhcCcHHHHH-------------HHHHH
Q 007643 380 NASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQ-------------LRVED 446 (595)
Q Consensus 380 ~~~~v~i~~~~~~ii~~~~~~~~i~~r~~~lr~~l~~~~~~~~~e~L~ERi~~l~gg~a~i~-------------~~i~D 446 (595)
+|++|++.++.|+++.+++++..++.|+++|+..++++.++|++++|+|||+||+|++++|. |+++|
T Consensus 319 ~~~~v~~~~~~~~~i~g~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~eR~~~l~~~~~tI~irG~t~~~l~E~er~i~D 398 (544)
T PRK12850 319 RAKRVLITKENTTIIDGAGDKKNIEARVKQIRAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRVDD 398 (544)
T ss_pred CCcEEEEEeeeEEEEeCCCCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhcCCeEEEEECCCcHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999976543 99999
Q ss_pred HHHHHHHHHHcCccccchHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhHHHHHHHHhcCCchHHHHHHhhhcCCCc
Q 007643 447 ALNATKAAVEEGIVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHK 526 (595)
Q Consensus 447 al~~~k~al~~gvVpGGGa~e~~ls~~L~~~~~~~~~~~q~~~i~~~a~AL~~ip~~L~~NaG~d~~~vi~kl~~~~~~~ 526 (595)
|++++|+++++|||||||++|++++..|+++ ++.++.+| +++++|++||+.||++||+|||+|+.+++.+|++.+ .+
T Consensus 399 Al~~~k~a~~~g~VpGGGa~e~~~s~~L~~~-~~~~~~~~-~~i~~~a~Al~~ip~~La~NaG~d~~~v~~~l~~~~-~~ 475 (544)
T PRK12850 399 ALHATRAAVEEGIVPGGGVALLRARSALRGL-KGANADET-AGIDIVRRALEEPLRQIATNAGFEGSVVVGKVAELP-GN 475 (544)
T ss_pred HHHHHHHHHhcCCccCCcHHHHHHHHHHHhc-cCCChHHH-HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHhhC-CC
Confidence 9999999999999999999999999999988 45556554 999999999999999999999999999999998754 57
Q ss_pred eeeecCCCccccccccCcccchHHHHHHHHHHHHHHHHHhchhHHhhccCCCCCCCCCCCCCCCCC
Q 007643 527 YGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 592 (595)
Q Consensus 527 ~Gid~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~~~~~~~~~~~~~~~~~ 592 (595)
+|||+.+|++.||++.|||||+.||.++|++|+++|++||+||++|+.+|+..|+ |+++|.||||
T Consensus 476 ~G~d~~~g~~~d~~~~gI~Dp~~vk~~al~~A~~~a~~iL~id~iI~~~~~~~~~-~~~~~~~~~~ 540 (544)
T PRK12850 476 FGFNAQTGEYGDMVEAGIIDPAKVTRTALQDAASIAALLITTEAMVAEAPKKAAA-AAAGPGPGMG 540 (544)
T ss_pred cceeCCCCcccchhhccCcccHHHHHHHHHHHHHHHHHHHhHHHhhccCCCCCCC-CCCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999998877666 6666666655
No 3
>PRK00013 groEL chaperonin GroEL; Reviewed
Probab=100.00 E-value=1.4e-108 Score=914.83 Aligned_cols=526 Identities=60% Similarity=0.897 Sum_probs=494.8
Q ss_pred cccccccCCcHHHHHHHHHHHHHHHHhhhhccCcCCCceeeecCCCCcEEecChHHHhccccccCccchHHHHHHHHHHH
Q 007643 62 AAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAA 141 (595)
Q Consensus 62 ~~k~~~f~~~~~~~~~~~~~v~~la~~v~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~l~l~hP~enigakLl~~~a~ 141 (595)
|+|.+.|| +++|..+++|+..++++|+|||||+||+|||+++.|+++|||||+||+|+|+++||+||+||+|++++|+
T Consensus 1 ~~~~~~~~--~~a~~~~i~a~~~ia~~v~ttLGP~G~~kmi~~~~g~~~ITnDG~tIlk~i~~~hp~~~~~akll~e~a~ 78 (542)
T PRK00013 1 MAKDIKFG--EDARRKLLRGVNKLADAVKVTLGPKGRNVVLEKSFGAPTITKDGVTVAKEIELEDPFENMGAQLVKEVAS 78 (542)
T ss_pred CCchhhch--HHHHHHHHHHHHHHHHHhhccCCCCCCCEEEECCCCCeeEeccHHHHHHHccCCCchhhHHHHHHHHHHH
Confidence 47899999 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccCCCcchHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHcccccCCch-HHHHHHhhhcCChhHHH
Q 007643 142 KTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEVG 220 (595)
Q Consensus 142 ~qd~~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~-~L~~va~ts~~~~~~ls 220 (595)
+||+++||||||+|+|+++||+++.+++++|+||..|++||+.|.+.++++|+++++|+++. +|.++|.||+++++.++
T Consensus 79 ~qd~e~GDGTTtvviLa~~LL~~a~~li~~Gi~P~~I~~G~~~A~~~~~~~L~~~a~~~~~~~~l~~va~ts~~~~~~ls 158 (542)
T PRK00013 79 KTNDVAGDGTTTATVLAQAIVREGLKNVAAGANPMDLKRGIDKAVEAAVEELKKISKPVEDKEEIAQVATISANGDEEIG 158 (542)
T ss_pred hcCcccCCccchHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHhcccchHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999876 89999999999999999
Q ss_pred HHHHHHHHhhccCCcEEeeCCCcccceeEEEeeeEEeecccCCccccCcccCcccccCeeEEEecccCCCHHHHHHHHHH
Q 007643 221 NMIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLED 300 (595)
Q Consensus 221 ~li~~Av~~v~~~g~I~v~~G~~~~ds~~li~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~~~~~i~~~le~ 300 (595)
+++++|+..+++++.|.++.+....+.+++++|++|+++|.+|||.+++++|+++++||+|+++|++|++++++.+++++
T Consensus 159 ~lv~~Av~~v~~~g~i~i~~~~~~~~~~~~v~G~~~~~g~~~~~~~~~~~~~~~~~~n~~Ilv~d~~i~~~~~l~~~l~~ 238 (542)
T PRK00013 159 KLIAEAMEKVGKEGVITVEESKGFETELEVVEGMQFDRGYLSPYFVTDPEKMEAELENPYILITDKKISNIQDLLPVLEQ 238 (542)
T ss_pred HHHHHHHHHhCcCCcEEEEEcCCCCceEEEEEeEEecCCcccccccccccCCeEEEecCEEEEEcCccCCHHHHHHHHHH
Confidence 99999999999888777765544444449999999999999999999998999999999999999999999999999999
Q ss_pred HHHcCCCEEEEeccccHHHHHHHHHHhhcccceeEEeeCCCcccchhhhHHHHHHHhCCeEeecCCCccccCCCCCCcee
Q 007643 301 AIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGN 380 (595)
Q Consensus 301 i~~~g~~lvIi~~~i~~~aL~~L~~n~~~g~~~i~av~~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~ 380 (595)
+.+.|+||||++++|+++|+++|..|+++|+++|+|||+|+||+.++++|+|||++||+++++++.|++++++++++||+
T Consensus 239 i~~~g~~lvi~~~~I~~~al~~l~~~~~~g~~~i~avr~~~~~~~r~~~l~~ia~~tG~~~i~~~~~~~~~~~~~~~LG~ 318 (542)
T PRK00013 239 VAQSGKPLLIIAEDVEGEALATLVVNKLRGTLKVVAVKAPGFGDRRKAMLEDIAILTGGTVISEELGLKLEDATLEDLGQ 318 (542)
T ss_pred HHHhCCCEEEECCCCcHHHHHHHHHcCCcccceEEEEecCCcccchhhhHHHHHHHcCCEEecccccCCcccCCHHHCCe
Confidence 99999999999999999999999999999999999999999999999999999999999999988888899999999999
Q ss_pred eeEEEEecCeEEEEccCCCchhhhhHHHHHHHHHHhhchHHHHHHHHHHHHHhcCcHHHHH-------------HHHHHH
Q 007643 381 ASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQ-------------LRVEDA 447 (595)
Q Consensus 381 ~~~v~i~~~~~~ii~~~~~~~~i~~r~~~lr~~l~~~~~~~~~e~L~ERi~~l~gg~a~i~-------------~~i~Da 447 (595)
|+.|+++++.|+++.+++++..+..|+.+|+..++++.++|++++|+|||+||+|++++|. |+++||
T Consensus 319 ~~~v~~~~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~eRi~~l~g~~~tI~irG~t~~~l~E~er~i~Da 398 (542)
T PRK00013 319 AKKVVVTKDNTTIVDGAGDKEAIKARVAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIKVGAATEVEMKEKKDRVEDA 398 (542)
T ss_pred eeEEEEecCEEEEEeCCCCHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHH
Confidence 9999999999999999988888999999999999999999999999999999999976432 999999
Q ss_pred HHHHHHHHHcCccccchHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhHHHHHHHHhcCCchHHHHHHhhhcCCCce
Q 007643 448 LNATKAAVEEGIVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKY 527 (595)
Q Consensus 448 l~~~k~al~~gvVpGGGa~e~~ls~~L~~~~~~~~~~~q~~~i~~~a~AL~~ip~~L~~NaG~d~~~vi~kl~~~~~~~~ 527 (595)
++++|+++++|||||||++|++++.+|+++ ++.++.+| +++++|++||+.||++||+|||+|+.+++.+|++.+++++
T Consensus 399 l~~vk~al~~g~VpGGGa~e~~~s~~L~~~-~~~~~~~~-~~i~~~a~Al~~ip~~La~NaG~d~~~vl~~l~~~~~~~~ 476 (542)
T PRK00013 399 LHATRAAVEEGIVPGGGVALLRAAPALEAL-KGLNGDEA-TGINIVLRALEAPLRQIAENAGLEGSVVVEKVKNGKGKGY 476 (542)
T ss_pred HHHHHHHHHcCcccCcHHHHHHHHHHHHHh-cCCChHHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhcCCCE
Confidence 999999999999999999999999999988 55666655 8999999999999999999999999999999987666789
Q ss_pred eeecCCCccccccccCcccchHHHHHHHHHHHHHHHHHhchhHHhhccCCCCCCCCCCCCCCCCCCC
Q 007643 528 GYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 594 (595)
Q Consensus 528 Gid~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~~~~~~~~~~~~~~~~~~~ 594 (595)
|||+.+|++.||++.|||||+.||.++|+.|+++|++||+||++|..+|+..+.+| ||+|.|||
T Consensus 477 G~d~~~g~~~d~~~~gI~Dp~~vk~~al~~A~~~a~~iL~id~iI~~~~~~~~~~~---~~~~~~~~ 540 (542)
T PRK00013 477 GYNAATGEYVDMIEAGIIDPTKVTRSALQNAASVAGLLLTTEAVVADKPEKKAAAP---PMGGGGMG 540 (542)
T ss_pred eEeCCCCceeehhhccCeecHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCC---CCCCCCCC
Confidence 99999999999999999999999999999999999999999999999887665544 44444443
No 4
>PRK12852 groEL chaperonin GroEL; Reviewed
Probab=100.00 E-value=4.3e-108 Score=913.75 Aligned_cols=528 Identities=53% Similarity=0.840 Sum_probs=497.5
Q ss_pred ccccccccCCcHHHHHHHHHHHHHHHHhhhhccCcCCCceeeecCCCCcEEecChHHHhccccccCccchHHHHHHHHHH
Q 007643 61 YAAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAA 140 (595)
Q Consensus 61 ~~~k~~~f~~~~~~~~~~~~~v~~la~~v~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~l~l~hP~enigakLl~~~a 140 (595)
||+|++.|| +++|+.+++|+..|+++|++||||+||||||+++.|+|+|||||+||+++|+++||++|+||+|++++|
T Consensus 1 ~~~~~~~~~--~~a~~~~~~~~~~la~~v~tTLGP~G~~kmi~~~~g~~~iTnDG~TIlk~i~~~~~~~~p~akll~e~a 78 (545)
T PRK12852 1 MAAKDVKFS--GDARDRMLRGVDILANAVKVTLGPKGRNVVIEKSFGAPRITKDGVTVAKEIELEDKFENMGAQMVREVA 78 (545)
T ss_pred CCcchhhcc--HHHHHHHHHHHHHHHHHHhcccCCCCCCEEEECCCCCeeEeccHHHHHHHccCCCcccChHHHHHHHHH
Confidence 358999999 899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcccccCCCcchHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHcccccCCch-HHHHHHhhhcCChhHH
Q 007643 141 AKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEV 219 (595)
Q Consensus 141 ~~qd~~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~-~L~~va~ts~~~~~~l 219 (595)
++||+++||||||+|+|+++||+++.+++++|+||..|++||++|++.++++|+++++|+++. ++.++|++|+++++.|
T Consensus 79 ~~q~~e~GDGTTtvvvLa~eLL~~a~~li~~Gi~P~~I~~G~~~A~~~~l~~L~~~s~~v~~~~~l~~va~~s~~~~~~l 158 (545)
T PRK12852 79 SKTNDLAGDGTTTATVLAQAIVREGAKAVAAGMNPMDLKRGIDIAVAAVVKDIEKRAKPVASSAEIAQVGTISANGDAAI 158 (545)
T ss_pred hhcCceecCCcchHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHhhhcCChHHH
Confidence 999999999999999999999999999999999999999999999999999999999999876 8999999999989999
Q ss_pred HHHHHHHHHhhccCCcEEeeCCCcccceeEEEeeeEEeecccCCccccCcccCcccccCeeEEEecccCCCHHHHHHHHH
Q 007643 220 GNMIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLE 299 (595)
Q Consensus 220 s~li~~Av~~v~~~g~I~v~~G~~~~ds~~li~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~~~~~i~~~le 299 (595)
++++++|+.++++++.|.+..|+++.+.+++++|+.|+++|.+|||++++++|+.+++||+|+++|++|+++++++++|+
T Consensus 159 ~~li~eA~~~vg~~g~i~v~~g~~~~~~~~~v~G~~~~~g~~~p~~v~~~~~~~~~l~n~~Ili~d~~i~~~~~i~~~l~ 238 (545)
T PRK12852 159 GKMIAQAMQKVGNEGVITVEENKSLETEVDIVEGMKFDRGYLSPYFVTNAEKMTVELDDAYILLHEKKLSGLQAMLPVLE 238 (545)
T ss_pred HHHHHHHHHHhccCCceeeecCCCcceEEEEEEeEEecCCccCCccccccccceEEecCceEEEecCccCCHHHHHHHHH
Confidence 99999999999999999998999875555999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCEEEEeccccHHHHHHHHHHhhcccceeEEeeCCCcccchhhhHHHHHHHhCCeEeecCCCccccCCCCCCce
Q 007643 300 DAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLG 379 (595)
Q Consensus 300 ~i~~~g~~lvIi~~~i~~~aL~~L~~n~~~g~~~i~av~~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG 379 (595)
.+.+.|+||||++++|+++|+++|+.|+++|.++|+|||+|+||+.++++|+|||++|||++++++.|++++++++++||
T Consensus 239 ~i~~~g~~lvI~~~~i~~~al~~l~~nk~~~~~~i~av~~~~~~~~r~~~l~~ia~~tGa~~i~~~~~~~l~~~~~~~lG 318 (545)
T PRK12852 239 AVVQSGKPLLIIAEDVEGEALATLVVNRLRGGLKVAAVKAPGFGDRRKAMLEDIAILTGGQLISEDLGIKLENVTLKMLG 318 (545)
T ss_pred HHHHhCcCEEEECCCCcHHHHHHHHHhcccccceEEEEecCCcccchHhHHHHHHHhcCCEEEecCcCCCcCCCCHHHCC
Confidence 99999999999999999999999999999999999999999999999999999999999999998888889999999999
Q ss_pred eeeEEEEecCeEEEEccCCCchhhhhHHHHHHHHHHhhchHHHHHHHHHHHHHhcCcHHHHH-------------HHHHH
Q 007643 380 NASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQ-------------LRVED 446 (595)
Q Consensus 380 ~~~~v~i~~~~~~ii~~~~~~~~i~~r~~~lr~~l~~~~~~~~~e~L~ERi~~l~gg~a~i~-------------~~i~D 446 (595)
+|+.|+++++.++++.++++++.+..|+++|+..++++.++|++++|+|||+||+|++++|. |+++|
T Consensus 319 ~~~~v~~~~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~~R~~~l~~~~~tI~irG~t~~~l~E~er~i~D 398 (545)
T PRK12852 319 RAKKVVIDKENTTIVNGAGKKADIEARVGQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRVED 398 (545)
T ss_pred CCcEEEEEccEEEEEeCCCCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHHHH
Confidence 99999999999999999888899999999999999999999999999999999999986543 99999
Q ss_pred HHHHHHHHHHcCccccchHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhHHHHHHHHhcCCchHHHHHHhhhcCCCc
Q 007643 447 ALNATKAAVEEGIVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHK 526 (595)
Q Consensus 447 al~~~k~al~~gvVpGGGa~e~~ls~~L~~~~~~~~~~~q~~~i~~~a~AL~~ip~~L~~NaG~d~~~vi~kl~~~~~~~ 526 (595)
|+|++++++++|||||||++|++++++|++++.. ++. +++++++|++||+.||++||+|||+|+.+++++|++.++++
T Consensus 399 Al~a~~~a~~~g~VpGGGa~e~~~s~~L~~~~~~-~~~-~q~~i~~~a~AL~~ip~~La~NaG~d~~~vl~~l~~~~~~~ 476 (545)
T PRK12852 399 ALNATRAAVQEGIVPGGGVALLRAKKAVGRINND-NAD-VQAGINIVLKALEAPIRQIAENAGVEGSIVVGKILENKSET 476 (545)
T ss_pred HHHHHHHHHhcCCCcCchHHHHHHHHHHHHhhcC-CcH-HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhcCCC
Confidence 9999999999999999999999999999998865 455 45999999999999999999999999999999998767788
Q ss_pred eeeecCCCccccccccCcccchHHHHHHHHHHHHHHHHHhchhHHhhccCCCCCC--CCCCCCCCCCC
Q 007643 527 YGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPA--MPAGNPMDNSG 592 (595)
Q Consensus 527 ~Gid~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~~~~~~--~~~~~~~~~~~ 592 (595)
+|||+.+|++.||++.|||||+.||+++|+.|+++|++||+||++|+.+|++... +|.++.||+||
T Consensus 477 ~G~d~~~g~~~d~~~~GI~Dp~~vk~~al~~A~e~a~~iL~id~iI~~~~~~~~~~~~~~~~~~~~~~ 544 (545)
T PRK12852 477 FGFDAQTEEYVDMVAKGIIDPAKVVRTALQDAASVAGLLVTTEAMVAELPKKDAAPAMPAGGGMGGMG 544 (545)
T ss_pred eeEeCcCCCcccHHhCcCCcChHHHHHHHHHHHHHHHHHHhHHHHhhcCCCCCCCCCCCCCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999987765322 22333444444
No 5
>PRK12849 groEL chaperonin GroEL; Reviewed
Probab=100.00 E-value=7.4e-108 Score=909.08 Aligned_cols=526 Identities=57% Similarity=0.862 Sum_probs=498.7
Q ss_pred cccccccCCcHHHHHHHHHHHHHHHHhhhhccCcCCCceeeecCCCCcEEecChHHHhccccccCccchHHHHHHHHHHH
Q 007643 62 AAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAA 141 (595)
Q Consensus 62 ~~k~~~f~~~~~~~~~~~~~v~~la~~v~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~l~l~hP~enigakLl~~~a~ 141 (595)
|+|.++|| ++++..+++++..++++|+|||||+||+|||+++.|+++|||||+||+++|+++||.||+||+|++++|+
T Consensus 1 ~~~~~~~~--~~a~~~~~~~~~~la~~v~tTLGP~G~~kmi~~~~g~~~ITnDGaTIlk~i~~~hp~~~~~a~ll~~~a~ 78 (542)
T PRK12849 1 MAKIIKFD--EEARRALERGVNKLADAVKVTLGPKGRNVVIDKSFGAPTITKDGVSIAKEIELEDPFENLGAQLVKEVAS 78 (542)
T ss_pred CCccccch--HHHHHHHHHHHHHHHHHHhcccCCCCCCEEEECCCCCeeEeccHHHHHHHcccCCccHhHHHHHHHHHHH
Confidence 47899999 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccCCCcchHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHcccccCCch-HHHHHHhhhcCChhHHH
Q 007643 142 KTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEVG 220 (595)
Q Consensus 142 ~qd~~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~-~L~~va~ts~~~~~~ls 220 (595)
+||+++||||||+|+|+++||+++.+++++|+||..|++||+.|++.++++|+++++|+++. +|.++|+||++++++|+
T Consensus 79 ~qd~e~GDGTTtvviLageLL~~a~~li~~GihP~~I~~G~~~A~~~~~~~L~~~s~~~~~~~~l~~va~ts~~~~~~l~ 158 (542)
T PRK12849 79 KTNDVAGDGTTTATVLAQALVQEGLKNVAAGANPMDLKRGIDKAVEAVVEELKALARPVSGSEEIAQVATISANGDEEIG 158 (542)
T ss_pred hcCCccCCCccHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCChHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999866 89999999999999999
Q ss_pred HHHHHHHHhhccCCcEEeeCCCcccceeEEEeeeEEeecccCCccccCcccCcccccCeeEEEecccCCCHHHHHHHHHH
Q 007643 221 NMIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLED 300 (595)
Q Consensus 221 ~li~~Av~~v~~~g~I~v~~G~~~~ds~~li~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~~~~~i~~~le~ 300 (595)
+++++|+..+++++.|.++.|++++|++++++|++|+++|.+|||.++.++|+++++||+|+++|++|++++++.+++++
T Consensus 159 ~lv~~Av~~v~~~g~i~i~~g~~~~d~~~~v~G~~~~~g~~~~~~~~~~~~~~~~~~n~~Ili~d~~i~~~~~~~~~l~~ 238 (542)
T PRK12849 159 ELIAEAMEKVGKDGVITVEESKTLETELEVTEGMQFDRGYLSPYFVTDPERMEAVLEDPLILLTDKKISSLQDLLPLLEK 238 (542)
T ss_pred HHHHHHHHHhccCCcEeEEeCCCcceeEEEEEeEEEecCcccCcccccccCceEEeeCcEEEeecCCcCCHHHHHHHHHH
Confidence 99999999999888888889999998669999999999999999999888899999999999999999999999999999
Q ss_pred HHHcCCCEEEEeccccHHHHHHHHHHhhcccceeEEeeCCCcccchhhhHHHHHHHhCCeEeecCCCccccCCCCCCcee
Q 007643 301 AIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGN 380 (595)
Q Consensus 301 i~~~g~~lvIi~~~i~~~aL~~L~~n~~~g~~~i~av~~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~ 380 (595)
+.+.|+||||++++|+++|+++|..|+++|.++|+|||+|+++++++++|+|||.+|||++++++.+.+++++++++||+
T Consensus 239 i~~~~~~lvI~~~~I~~~al~~l~~~~~~~~~~i~avr~~~~~~~r~~~l~~ia~~tGa~~v~~~~~~~~~~~~~~~LG~ 318 (542)
T PRK12849 239 VAQSGKPLLIIAEDVEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDIAILTGGTVISEDLGLKLEEVTLDDLGR 318 (542)
T ss_pred HHHhCCCEEEECCCCcHHHHHHHHHhhhhccccEEEEeCCCccchhHhHHHHHHHHhCCEEecccccCCcccCCHHHCce
Confidence 99999999999999999999999999999999999999999999999999999999999999988888899999999999
Q ss_pred eeEEEEecCeEEEEccCCCchhhhhHHHHHHHHHHhhchHHHHHHHHHHHHHhcCcHHHHH-------------HHHHHH
Q 007643 381 ASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQ-------------LRVEDA 447 (595)
Q Consensus 381 ~~~v~i~~~~~~ii~~~~~~~~i~~r~~~lr~~l~~~~~~~~~e~L~ERi~~l~gg~a~i~-------------~~i~Da 447 (595)
|+.|++++++|+++.+++++..+..|+.+|+.+++.+.++|++++|+|||+||+|++++|. |+++||
T Consensus 319 ~~~v~~~~~~~~~i~g~~~~~~i~~r~~~l~~~~~~~~~~~~~~~l~eR~~~l~~~~~TI~irG~t~~~l~E~er~i~DA 398 (542)
T PRK12849 319 AKRVTITKDNTTIVDGAGDKEAIEARVAQIRRQIEETTSDYDREKLQERLAKLAGGVAVIKVGAATEVELKERKDRVEDA 398 (542)
T ss_pred eeEEEEeeeeEEEEeCCCCHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHhcCCeEEEEeCCCCHHHHHHHHHHHHHH
Confidence 9999999999999999989999999999999999999999999999999999999976543 999999
Q ss_pred HHHHHHHHHcCccccchHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhHHHHHHHHhcCCchHHHHHHhhhcCCCce
Q 007643 448 LNATKAAVEEGIVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKY 527 (595)
Q Consensus 448 l~~~k~al~~gvVpGGGa~e~~ls~~L~~~~~~~~~~~q~~~i~~~a~AL~~ip~~L~~NaG~d~~~vi~kl~~~~~~~~ 527 (595)
++++|+++++|||||||++|++++.+|++++ +.++.+| +++++|++||+.||++||+|||+|+.+++.+|++.+ +++
T Consensus 399 l~~~~~a~~~g~VpGGGa~e~~ls~~L~~~~-~~~g~~~-~~i~~~a~Al~~ip~~La~NaG~d~~~vi~~L~~~~-~~~ 475 (542)
T PRK12849 399 LNATRAAVEEGIVPGGGVALLRAAKALDELA-GLNGDQA-AGVEIVRRALEAPLRQIAENAGLDGSVVVAKVLELE-DGF 475 (542)
T ss_pred HHHHHHHHHcCeecCCCHHHHHHHHHHHHhh-CCChHHH-HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHhhC-CCc
Confidence 9999999999999999999999999999988 6666655 899999999999999999999999999999998764 689
Q ss_pred eeecCCCccccccccCcccchHHHHHHHHHHHHHHHHHhchhHHhhccCCCCCCCCCCCCCCCCC
Q 007643 528 GYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 592 (595)
Q Consensus 528 Gid~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~~~~~~~~~~~~~~~~~ 592 (595)
|||+.+|++.||++.|||||+.+|.++|+.|+++|++||+||++|+.+|+...+.++++||++||
T Consensus 476 G~d~~~g~~~d~~~~GV~Dp~~vk~~al~~A~e~A~~iL~id~iI~~~~~~~~~~~~~~~~~~~~ 540 (542)
T PRK12849 476 GFNAATGEYGDLIAAGIIDPVKVTRSALQNAASVAGLLLTTEALVADKPEEEDPPGGMGGMGGMG 540 (542)
T ss_pred ceeCCCCccccHHhccCccCHHHHHHHHHHHHHHHHHHHhHHHHHhcCCccCCCCCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999876543312455666666
No 6
>PRK14104 chaperonin GroEL; Provisional
Probab=100.00 E-value=3.9e-106 Score=896.01 Aligned_cols=526 Identities=51% Similarity=0.821 Sum_probs=499.1
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhhccCcCCCceeeecCCCCcEEecChHHHhccccccCccchHHHHHHHHHHHh
Q 007643 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (595)
Q Consensus 63 ~k~~~f~~~~~~~~~~~~~v~~la~~v~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~l~l~hP~enigakLl~~~a~~ 142 (595)
+|.+.|| +++|+.+++|+..|+++|++||||+||||||+++.|+|+|||||+||+|+|++++|+|++||+|++++|++
T Consensus 3 ~~~~~~~--~~a~~~~~~~~~~la~~v~tTLGP~G~~k~i~~~~g~~~iTnDG~tIlk~i~~~d~~~~pgakll~e~a~~ 80 (546)
T PRK14104 3 AKEVKFG--VDARDRMLRGVDILANAVKVTLGPKGRNVVLDKSFGAPRITKDGVTVAKEIELEDKFENMGAQMVREVASK 80 (546)
T ss_pred cceecch--HHHHHHHHHHHHHHHHHHhhccCCCCCceEEEcCCCCeeEeccHHHHHHHhcCCCcccChHHHHHHHHHHh
Confidence 6899999 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCcchHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHcccccCCch-HHHHHHhhhcCChhHHHH
Q 007643 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEVGN 221 (595)
Q Consensus 143 qd~~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~-~L~~va~ts~~~~~~ls~ 221 (595)
||+++||||||+|||+++||+++.+++++|+||..|++||++|.+.++++|+++++++++. +|.++|++|+++++.+++
T Consensus 81 qd~e~GDGTTTvvvLa~~LL~~a~~li~~Gi~P~~I~~G~~~A~~~~~~~L~~~a~~v~~~~~l~~va~~s~~~d~~i~~ 160 (546)
T PRK14104 81 SADAAGDGTTTATVLAQAIVREGAKSVAAGMNPMDLKRGIDLAVEAVVADLVKNSKKVTSNDEIAQVGTISANGDAEIGK 160 (546)
T ss_pred hcccccCcccHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhcCchHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999866 899999999999999999
Q ss_pred HHHHHHHhhccCCcEEeeCCCcccceeEEEeeeEEeecccCCccccCcccCcccccCeeEEEecccCCCHHHHHHHHHHH
Q 007643 222 MIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDA 301 (595)
Q Consensus 222 li~~Av~~v~~~g~I~v~~G~~~~ds~~li~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~~~~~i~~~le~i 301 (595)
++++|+.+++++|.|.++.+++++|++++++|++|+++|.+|||+++++.++.++++|+|+++|.+++++++++++++.+
T Consensus 161 lv~~Av~~vg~~g~i~v~~~~~~~~~~~~~~G~~~~~g~~~p~~~~~~~~~~~~~~~~~Ilv~d~~i~~~~~i~~~l~~i 240 (546)
T PRK14104 161 FLADAMKKVGNEGVITVEEAKSLETELDVVEGMQFDRGYISPYFVTNADKMRVEMDDAYILINEKKLSSLNELLPLLEAV 240 (546)
T ss_pred HHHHHHHHhccCCceeeEecccccceEEEEEEEEEeCCCCCcchhcCcccCceeeeCcEEEEehhhhcCHHHHHHHHHHH
Confidence 99999999999999999888888666699999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCEEEEeccccHHHHHHHHHHhhcccceeEEeeCCCcccchhhhHHHHHHHhCCeEeecCCCccccCCCCCCceee
Q 007643 302 IRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNA 381 (595)
Q Consensus 302 ~~~g~~lvIi~~~i~~~aL~~L~~n~~~g~~~i~av~~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~ 381 (595)
.+.|+||||++++|+++|+++|..|++++.++|+|||+|+||+.++++|+|||++|||++++++.++.++++++++||+|
T Consensus 241 ~~~g~~lvI~~~~i~~~al~~l~~Nk~~~~~~i~av~~~~~g~~r~~~l~~ia~~tG~~~i~~~~~~~l~~~~~~~LG~a 320 (546)
T PRK14104 241 VQTGKPLVIVAEDVEGEALATLVVNRLRGGLKVAAVKAPGFGDRRKAMLQDIAILTGGQAISEDLGIKLENVTLQMLGRA 320 (546)
T ss_pred HHhCcCEEEECCCCcHHHHHHHHhCcccceeeEEEEeccCCCcchHHHHHHHHHHhCCEEEecCCCCCcCcCCHHHCCce
Confidence 99999999999999999999999999999899999999999999999999999999999999988888999999999999
Q ss_pred eEEEEecCeEEEEccCCCchhhhhHHHHHHHHHHhhchHHHHHHHHHHHHHhcCcHHHHH-------------HHHHHHH
Q 007643 382 SKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQ-------------LRVEDAL 448 (595)
Q Consensus 382 ~~v~i~~~~~~ii~~~~~~~~i~~r~~~lr~~l~~~~~~~~~e~L~ERi~~l~gg~a~i~-------------~~i~Dal 448 (595)
++|+++++.++++.++++++.+..|+.+|+..++++.++|++++|+|||+||+|++++|. |+++||+
T Consensus 321 ~~v~~~~~~~~~i~g~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~eRi~~l~~~~atI~irG~t~~~l~e~~r~i~Dal 400 (546)
T PRK14104 321 KKVMIDKENTTIVNGAGKKADIEARVAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDAM 400 (546)
T ss_pred eEEEEcCCEEEEEeCCCCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHH
Confidence 999999999999999989899999999999999999999999999999999999987543 9999999
Q ss_pred HHHHHHHHcCccccchHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhHHHHHHHHhcCCchHHHHHHhhhcCCCcee
Q 007643 449 NATKAAVEEGIVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYG 528 (595)
Q Consensus 449 ~~~k~al~~gvVpGGGa~e~~ls~~L~~~~~~~~~~~q~~~i~~~a~AL~~ip~~L~~NaG~d~~~vi~kl~~~~~~~~G 528 (595)
+++++++++|||||||++|++++..|+++.. .. .++++++++|++||+.||++||+|||+|+.+++.+|+..+++++|
T Consensus 401 ~a~~~ai~~g~VpGGGa~e~~~s~~L~~~~~-~~-~~~~~~i~~~a~Al~~ip~~La~NaG~d~~~v~~~l~~~~~~~~G 478 (546)
T PRK14104 401 HATRAAVEEGIVPGGGVALLRASEQLKGIKT-KN-DDQKTGVEIVRKALSAPARQIAINAGEDGSVIVGKILEKEQYSYG 478 (546)
T ss_pred HHHHHHHHcCcCcCchHHHHHHHHHHHHhhc-CC-hHHHHHHHHHHHHHHhhHHHHHHhCCCCHHHHHHHHHhcCCCcEe
Confidence 9999999999999999999999999998743 33 445699999999999999999999999999999999875667899
Q ss_pred eecCCCccccccccCcccchHHHHHHHHHHHHHHHHHhchhHHhhccCCCCCCCCCCCCCCCCC
Q 007643 529 YNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 592 (595)
Q Consensus 529 id~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~~~~~~~~~~~~~~~~~ 592 (595)
||+.+|++.||++.|||||+.||+++|++|+++|++||+||++|...|+..+..|.-.||++||
T Consensus 479 ~d~~~g~~~d~~~~GI~Dp~~vk~~al~~A~~~a~~iL~id~~I~~~~~~~~~~~~~~~~~~~~ 542 (546)
T PRK14104 479 FDSQTGEYGNLVSKGIIDPTKVVRTAIQNAASVAALLITTEAMVAELPKKGGAGPAMPPGGGMG 542 (546)
T ss_pred EeCCCCceeehHhcCCEEcHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999887766645446777777
No 7
>PRK12851 groEL chaperonin GroEL; Reviewed
Probab=100.00 E-value=3.5e-106 Score=896.27 Aligned_cols=516 Identities=56% Similarity=0.860 Sum_probs=488.1
Q ss_pred ccccccccCCcHHHHHHHHHHHHHHHHhhhhccCcCCCceeeecCCCCcEEecChHHHhccccccCccchHHHHHHHHHH
Q 007643 61 YAAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAA 140 (595)
Q Consensus 61 ~~~k~~~f~~~~~~~~~~~~~v~~la~~v~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~l~l~hP~enigakLl~~~a 140 (595)
||+|.+.|+ +++++.+++++..++++|++||||+||+|||+++.|+++|||||+||+++|+++||++|+||+|++++|
T Consensus 1 ~~~~~~~~~--~~a~~~~~~~~~~la~~v~tTlGP~G~~kmi~~~~g~~~ITnDG~tIlk~i~~~hp~~~~~akll~~~a 78 (541)
T PRK12851 1 MAAKEVKFH--VEAREKMLRGVNILADAVKVTLGPKGRNVVIDKSFGAPTITNDGVTIAKEIELEDKFENMGAQMVREVA 78 (541)
T ss_pred CCcceeccc--HHHHHHHHHHHHHHHHHHhcCCCCCCCCEEEECCCCCeeEecCHHHHHHHccCCCchhhHHHHHHHHHH
Confidence 358999999 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcccccCCCcchHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHcccccCCch-HHHHHHhhhcCChhHH
Q 007643 141 AKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEV 219 (595)
Q Consensus 141 ~~qd~~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~-~L~~va~ts~~~~~~l 219 (595)
++||+++||||||+|+|+++||+++.+++++|+||..|++||+.|++.++++|+++++++++. +|.++|++|++++++|
T Consensus 79 ~~qd~e~GDGTTtvviLa~~LL~~a~~li~~Gihp~~I~~G~~~a~~~~~~~L~~~s~~~~~~~~l~~va~~s~~~~~~l 158 (541)
T PRK12851 79 SKTNDVAGDGTTTATVLAQAIVREGAKAVAAGANPMDLKRGIDRAVAAVVEELKANARPVTTNAEIAQVATISANGDAEI 158 (541)
T ss_pred HhhhHhhCCCccHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhccChHHH
Confidence 999999999999999999999999999999999999999999999999999999999999866 8999999999999999
Q ss_pred HHHHHHHHHhhccCCcEEeeCCCcccceeEEEeeeEEeecccCCccccCcccCcccccCeeEEEecccCCCHHHHHHHHH
Q 007643 220 GNMIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLE 299 (595)
Q Consensus 220 s~li~~Av~~v~~~g~I~v~~G~~~~ds~~li~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~~~~~i~~~le 299 (595)
++++++|+..+++++.|.++.+....+++++++|++|+++|.+|||.+++++|+++++||+|+++|+++++.+++.++++
T Consensus 159 ~~lv~~Av~~vg~~g~i~i~~~~~~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~~~~~Ilv~d~~i~~~~~i~~~l~ 238 (541)
T PRK12851 159 GRLVAEAMEKVGNEGVITVEESKTAETELEVVEGMQFDRGYLSPYFVTDADKMEAELEDPYILIHEKKISNLQDLLPVLE 238 (541)
T ss_pred HHHHHHHHHHhcccCceEEEEccCCCcceEEEEEEEecCCccccccccCCCCCeEEecccEEEEEcCCcCcHHHHHHHHH
Confidence 99999999999988877775544444445999999999999999999999899999999999999999999999999999
Q ss_pred HHHHcCCCEEEEeccccHHHHHHHHHHhhcccceeEEeeCCCcccchhhhHHHHHHHhCCeEeecCCCccccCCCCCCce
Q 007643 300 DAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLG 379 (595)
Q Consensus 300 ~i~~~g~~lvIi~~~i~~~aL~~L~~n~~~g~~~i~av~~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG 379 (595)
.+.+.|+||||++++|+++++++|+.|+++|.++|+|||+|+||++++++|+|||++|||++++++.+++++++++++||
T Consensus 239 ~i~~~~~~lvi~~~~I~~~al~~l~~n~i~g~~~i~av~~p~~~~~~~~~l~~ia~~tGa~~i~~~~~~~~~~~~~~~LG 318 (541)
T PRK12851 239 AVVQSGKPLLIIAEDVEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDIAILTGGTVISEDLGIKLENVTLEQLG 318 (541)
T ss_pred HHHHhCcCEEEECCCCChHHHHHHHHcCCcCceeEEEEecCccccccHhHHHHHHHHhCCEEeccCCCCCcCcCCHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999998888889999999999
Q ss_pred eeeEEEEecCeEEEEccCCCchhhhhHHHHHHHHHHhhchHHHHHHHHHHHHHhcCcHHHHH-------------HHHHH
Q 007643 380 NASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQ-------------LRVED 446 (595)
Q Consensus 380 ~~~~v~i~~~~~~ii~~~~~~~~i~~r~~~lr~~l~~~~~~~~~e~L~ERi~~l~gg~a~i~-------------~~i~D 446 (595)
+|+.|++.++.|+++.+++++..+..|+++|+..++++.+++++++|+|||+||+|++++|. |+++|
T Consensus 319 ~~~~v~~~~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~~ri~~l~g~~~tI~irG~t~~~l~E~er~i~D 398 (541)
T PRK12851 319 RAKKVVVEKENTTIIDGAGSKTEIEGRVAQIRAQIEETTSDYDREKLQERLAKLAGGVAVIRVGASTEVEVKEKKDRVDD 398 (541)
T ss_pred CccEEEEEcceEEEEcCCCCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHH
Confidence 99999999999999999989999999999999999999999999999999999999976442 99999
Q ss_pred HHHHHHHHHHcCccccchHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhHHHHHHHHhcCCchHHHHHHhhhcCCCc
Q 007643 447 ALNATKAAVEEGIVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHK 526 (595)
Q Consensus 447 al~~~k~al~~gvVpGGGa~e~~ls~~L~~~~~~~~~~~q~~~i~~~a~AL~~ip~~L~~NaG~d~~~vi~kl~~~~~~~ 526 (595)
|++++++++++|||||||++|++++.+|++++.. ++.+ ++++++|++||+.||++||+|||+|+.+++++|++.+ .+
T Consensus 399 Al~a~~~al~~g~VpGGGa~e~~~s~~L~~~~~~-~~~~-~~~~~~~a~AL~~ip~~La~NaG~d~~~vl~~l~~~~-~~ 475 (541)
T PRK12851 399 ALHATRAAVEEGIVPGGGVALLRAVKALDKLETA-NGDQ-RTGVEIVRRALEAPVRQIAENAGAEGSVVVGKLREKP-GG 475 (541)
T ss_pred HHHHHHHHHHcCcccCchHHHHHHHHHHHHHhcC-CcHH-HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHhhC-CC
Confidence 9999999999999999999999999999998865 5554 5999999999999999999999999999999998764 47
Q ss_pred eeeecCCCccccccccCcccchHHHHHHHHHHHHHHHHHhchhHHhhccCCCCCC
Q 007643 527 YGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPA 581 (595)
Q Consensus 527 ~Gid~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~~~~~~ 581 (595)
+|||+.+|+++||++.|||||+.||.++|+.|+++|++||+||++|+.+|+..|+
T Consensus 476 ~G~d~~~g~~~d~~~~GIiDp~~vk~~al~~A~e~A~~iL~id~iI~~~~~~~~~ 530 (541)
T PRK12851 476 YGFNAATNEYGDLYAQGVIDPVKVVRTALQNAASVAGLLLTTEAMVAEKPKKEPA 530 (541)
T ss_pred eeeeCCCCCccchhhccCEecHHHHHHHHHHHHHHHHHHHhHHHhhhcCCCCCCC
Confidence 9999999999999999999999999999999999999999999999998766544
No 8
>PTZ00114 Heat shock protein 60; Provisional
Probab=100.00 E-value=6.5e-105 Score=889.28 Aligned_cols=515 Identities=51% Similarity=0.840 Sum_probs=490.7
Q ss_pred ccccccccCCcHHHHHHHHHHHHHHHHhhhhccCcCCCceeeecCCCCcEEecChHHHhccccccCccchHHHHHHHHHH
Q 007643 61 YAAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAA 140 (595)
Q Consensus 61 ~~~k~~~f~~~~~~~~~~~~~v~~la~~v~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~l~l~hP~enigakLl~~~a 140 (595)
+|+++..|+ ++++..++++|..|+++|+|||||+||||||++++|+|+|||||+||+|+|+++||.||+||+|++++|
T Consensus 12 ~~~~~~~~~--~~a~~~~i~~~~~la~~v~tTLGP~G~~kmi~~~~g~~~ITnDG~TIlk~i~~~~p~~~~~a~ll~~~a 89 (555)
T PTZ00114 12 FKGKEIRFG--DEARQSLLKGIERLADAVAVTLGPKGRNVIIEQEYGSPKITKDGVTVAKAIEFSDRFENVGAQLIRQVA 89 (555)
T ss_pred HhhhhhhhH--HHHHHHHHHHHHHHHHHHhccCCCCCCcEEEECCCCCeEEeeChHHHHHhcCcCCcchhHHHHHHHHHH
Confidence 347788999 899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcccccCCCcchHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHcccccCCch-HHHHHHhhhcCChhHH
Q 007643 141 AKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEV 219 (595)
Q Consensus 141 ~~qd~~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~-~L~~va~ts~~~~~~l 219 (595)
++||+++||||||+|||+++||+++.+++++|+||..|++||+.|.+.++++|+++++++++. +|.++|+||++++++|
T Consensus 90 ~~qd~evGDGTTtvvvLa~~LL~~a~~li~~GihP~~I~~G~~~A~~~~~~~L~~~s~~v~~~~~l~~va~ts~~~~~~l 169 (555)
T PTZ00114 90 SKTNDKAGDGTTTATILARAIFREGCKAVAAGLNPMDLKRGIDLAVKVVLESLKEQSRPVKTKEDILNVATISANGDVEI 169 (555)
T ss_pred HhhccccCCcccHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHcCChHHH
Confidence 999999999999999999999999999999999999999999999999999999999999866 8999999999999999
Q ss_pred HHHHHHHHHhhccCCcEEeeCCCcccceeEEEeeeEEeecccCCccccCcccCcccccCeeEEEecccCCCHHHHHHHHH
Q 007643 220 GNMIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLE 299 (595)
Q Consensus 220 s~li~~Av~~v~~~g~I~v~~G~~~~ds~~li~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~~~~~i~~~le 299 (595)
++++++|+.+++++|.|.+++|++++|++++++|++|+++|.+|||++++++|+++++||+|+++|++|++++++.++++
T Consensus 170 ~~li~eAv~~vg~~g~I~~~~g~~~~ds~~~v~G~~~~~g~~~~~~~~~~~~~~~~l~~~~Ili~d~~L~~~~~i~~~le 249 (555)
T PTZ00114 170 GSLIADAMDKVGKDGTITVEDGKTLEDELEVVEGMSFDRGYISPYFVTNEKTQKVELENPLILVTDKKISSIQSILPILE 249 (555)
T ss_pred HHHHHHHHHHhCcCCcEEEcCCCCccceEEEEEEEEEeccccccccccccccCeEEecCCEEEEEcCCCCCHHHHHHHHH
Confidence 99999999999998999999999999998899999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCEEEEeccccHHHHHHHHHHhhcccceeEEeeCCCcccchhhhHHHHHHHhCCeEeecC-CCccccCCCCCCc
Q 007643 300 DAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDE-VGLALDKVGKEVL 378 (595)
Q Consensus 300 ~i~~~g~~lvIi~~~i~~~aL~~L~~n~~~g~~~i~av~~~~~~~~~~~~L~~ia~~tGa~ii~~~-~~~~l~~~~~~~l 378 (595)
.+.+.|+||||++++|+++|+++|..|+++|.++|+|||+|++|++++++|+|||++|||+++++. .+..++++++++|
T Consensus 250 ~i~~~~~~llI~~~~i~~~al~~L~~n~~~g~~~i~avk~~~~g~~~~~~l~~la~~tG~~~i~~~~~~~~l~~~~~~~L 329 (555)
T PTZ00114 250 HAVKNKRPLLIIAEDVEGEALQTLIINKLRGGLKVCAVKAPGFGDNRKDILQDIAVLTGATVVSEDNVGLKLDDFDPSML 329 (555)
T ss_pred HHHHhCCCEEEECCCCcHHHHHHHHHhCCCCceEEEEEecCCCCcchHHHHHHHHHHhCCEEecccccccCcccCCHHHc
Confidence 999999999999999999999999999999999999999999999999999999999999999986 6677788999999
Q ss_pred eeeeEEEEecCeEEEEccCCCchhhhhHHHHHHHHHHhhchHHHHHHHHHHHHHhcCcHHHHH-------------HHHH
Q 007643 379 GNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQ-------------LRVE 445 (595)
Q Consensus 379 G~~~~v~i~~~~~~ii~~~~~~~~i~~r~~~lr~~l~~~~~~~~~e~L~ERi~~l~gg~a~i~-------------~~i~ 445 (595)
|+|++|++++++++++.+++++..++.|+.+|+..+++..+++++++|+|||+||+|++++|. |+++
T Consensus 330 G~a~~v~~~~~~~~~~~~~~~~~~i~~r~~~l~~~~~~~~~~~~~~~l~eR~~~l~~~~~tI~i~G~t~~~l~E~~r~i~ 409 (555)
T PTZ00114 330 GSAKKVTVTKDETVILTGGGDKAEIKERVELLRSQIERTTSEYDKEKLKERLAKLSGGVAVIKVGGASEVEVNEKKDRIE 409 (555)
T ss_pred CCCceEEEEeceEEEEeCCCcHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCeEEEEecCCCHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999876543 9999
Q ss_pred HHHHHHHHHHHcCccccchHHHHHHHHHHHHHhh--cCCchhHHHHHHHHHHHHhHHHHHHHHhcCCchHHHHHHhhhcC
Q 007643 446 DALNATKAAVEEGIVVGGGCTLLRLSSKVDAIKE--TLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSD 523 (595)
Q Consensus 446 Dal~~~k~al~~gvVpGGGa~e~~ls~~L~~~~~--~~~~~~q~~~i~~~a~AL~~ip~~L~~NaG~d~~~vi~kl~~~~ 523 (595)
||++++|+++++|||||||++|++++.+|++++. +.++.+ ++++++|++||+.||++||+|||+|+.+++++|++.+
T Consensus 410 Dal~~~k~a~~~gvVpGGGa~e~~~s~~L~~~~~~~~~~~~~-~~~i~~~a~AL~~ip~~La~NaG~d~~~v~~~l~~~~ 488 (555)
T PTZ00114 410 DALNATRAAVEEGIVPGGGVALLRASKLLDKLEEDNELTPDQ-RTGVKIVRNALRLPTKQIAENAGVEGAVVVEKILEKK 488 (555)
T ss_pred HHHHHHHHHHhcCcccCCcHHHHHHHHHHHHHhhccCCchHH-HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcC
Confidence 9999999999999999999999999999998875 355555 4899999999999999999999999999999997645
Q ss_pred CCceeeecCCCccccccccCcccchHHHHHHHHHHHHHHHHHhchhHHhhccCCC
Q 007643 524 NHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEP 578 (595)
Q Consensus 524 ~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~~~ 578 (595)
++++|||+.+|++.||++.|||||+.||.++|++|+++|++||+||++|+..|.+
T Consensus 489 ~~~~G~d~~~g~~~d~~~~GI~Dp~~vk~~al~~A~~~A~~iL~id~iI~~~~~~ 543 (555)
T PTZ00114 489 DPSFGYDAQTGEYVNMFEAGIIDPTKVVRSALVDAASVASLMLTTEAAIVDLPKE 543 (555)
T ss_pred CCCEeEeCCCCcEeeHHhCCCEeCHHHHHHHHHHHHHHHHHHHhHHHHHHhCCcc
Confidence 6789999999999999999999999999999999999999999999999997654
No 9
>CHL00093 groEL chaperonin GroEL
Probab=100.00 E-value=5.7e-105 Score=885.82 Aligned_cols=511 Identities=55% Similarity=0.867 Sum_probs=485.1
Q ss_pred cccccccCCcHHHHHHHHHHHHHHHHhhhhccCcCCCceeeecCCCCcEEecChHHHhccccccCccchHHHHHHHHHHH
Q 007643 62 AAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAA 141 (595)
Q Consensus 62 ~~k~~~f~~~~~~~~~~~~~v~~la~~v~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~l~l~hP~enigakLl~~~a~ 141 (595)
|+|+++|+ +++|+.+++||..++++|++||||+||+|||+++.|+|+|||||+||+|+|+++||++++|++|++++|.
T Consensus 1 ~~~~~~~~--~~~~~~~~~g~~~la~~v~tTlGP~G~~kmi~~~~g~~~ITnDG~tIlk~i~~~hp~a~~g~~li~~~a~ 78 (529)
T CHL00093 1 MSKKILYQ--DNARRALERGMDILAEAVSVTLGPKGRNVVLEKKYGSPQIVNDGVTIAKEIELEDHIENTGVALIRQAAS 78 (529)
T ss_pred CCceeecC--HHHHHHHHHHHHHHHHHHhcccCCCCCcEEEECCCCCeeEeccHHHHHHHccCcCHHHHHHHHHHHHHHH
Confidence 47899999 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccCCCcchHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHcccccCCch-HHHHHHhhhcCChhHHH
Q 007643 142 KTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEVG 220 (595)
Q Consensus 142 ~qd~~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~-~L~~va~ts~~~~~~ls 220 (595)
+|++++||||||+|||+++||+++.+++++|+||..|++||++|.+.+++.|+++++++++. +|.+||++|+++++.|+
T Consensus 79 ~~~~e~GDGTTtvvvLa~eLL~~a~~li~~Gi~P~~I~~G~~~A~~~~l~~L~~~s~~v~d~~~L~~VA~ts~~~~~~l~ 158 (529)
T CHL00093 79 KTNDVAGDGTTTATVLAYAIVKQGMKNVAAGANPISLKRGIEKATQYVVSQIAEYARPVEDIQAITQVASISAGNDEEVG 158 (529)
T ss_pred hcCceecCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHhccChHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999876 89999999999999999
Q ss_pred HHHHHHHHhhccCCcEEeeCCCcccceeEEEeeeEEeecccCCccccCcccCcccccCeeEEEecccCCCH-HHHHHHHH
Q 007643 221 NMIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNA-RDLINVLE 299 (595)
Q Consensus 221 ~li~~Av~~v~~~g~I~v~~G~~~~ds~~li~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~~~-~~i~~~le 299 (595)
+|+++|+.+++++|.|.++.|+..++.+++++|++|+++|.+|||++++++|+.+++||+|+++|++|... .+++++++
T Consensus 159 ~lv~eAv~~vg~~g~i~~~~g~~~~~~~~~v~G~~~~~g~~~p~fv~~~k~~~~~l~n~~Ili~d~~le~~~~~i~~~l~ 238 (529)
T CHL00093 159 SMIADAIEKVGREGVISLEEGKSTVTELEITEGMRFEKGFISPYFVTDTERMEVVQENPYILLTDKKITLVQQDLLPILE 238 (529)
T ss_pred HHHHHHHHHhccCCceeecCCCccceeeEEEeeEEecCccCcCccccCCccceEEecCceehhhcCCCCchHHHHHHHHH
Confidence 99999999999889888877776666669999999999999999999999999999999999999999987 78999999
Q ss_pred HHHHcCCCEEEEeccccHHHHHHHHHHhhcccceeEEeeCCCcccchhhhHHHHHHHhCCeEeecCCCccccCCCCCCce
Q 007643 300 DAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLG 379 (595)
Q Consensus 300 ~i~~~g~~lvIi~~~i~~~aL~~L~~n~~~g~~~i~av~~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG 379 (595)
.+.+.|+||||++++|+++++++|+.|+++|+.+|+|||+|+++++++++|+|||++|||++++++.|.+++++++++||
T Consensus 239 ~i~~~~~~lvi~~~~i~~~al~~l~l~k~~g~~~i~avr~~~~~~~~k~~l~~ia~~tGa~~i~~~~~~~~~~~~~~~LG 318 (529)
T CHL00093 239 QVTKTKRPLLIIAEDVEKEALATLVLNKLRGIVNVVAVRAPGFGDRRKAMLEDIAILTGGQVITEDAGLSLETIQLDLLG 318 (529)
T ss_pred HHHhcCCCEEEEcCCCChHHHHHHHHhhhcccceEEEEecCCCCcchHHHHHHHHHhhCCEEecccccCCcCCCCHHHCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999888889999999999
Q ss_pred eeeEEEEecCeEEEEccCCCchhhhhHHHHHHHHHHhhchHHHHHHHHHHHHHhcCcHHHHH-------------HHHHH
Q 007643 380 NASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQ-------------LRVED 446 (595)
Q Consensus 380 ~~~~v~i~~~~~~ii~~~~~~~~i~~r~~~lr~~l~~~~~~~~~e~L~ERi~~l~gg~a~i~-------------~~i~D 446 (595)
+|++|++.+++++++. .+++..+..||..++.+++.+++++++++|+|||++|+|++++|. |+++|
T Consensus 319 ~~~~v~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~eR~~~l~g~~~~I~irg~t~~~l~E~er~i~D 397 (529)
T CHL00093 319 QARRIIVTKDSTTIIA-DGNEEQVKARCEQLRKQIEIADSSYEKEKLQERLAKLSGGVAVIKVGAATETEMKDKKLRLED 397 (529)
T ss_pred cceEEEEecCEEEEEe-cCcHHHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHhcCCeEEEEeccCcHHHHHHHHHHHHH
Confidence 9999999999999997 556778889999999999999999999999999999999987542 99999
Q ss_pred HHHHHHHHHHcCccccchHHHHHHHHHHHHHhh-cCCchhHHHHHHHHHHHHhHHHHHHHHhcCCchHHHHHHhhhcCCC
Q 007643 447 ALNATKAAVEEGIVVGGGCTLLRLSSKVDAIKE-TLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNH 525 (595)
Q Consensus 447 al~~~k~al~~gvVpGGGa~e~~ls~~L~~~~~-~~~~~~q~~~i~~~a~AL~~ip~~L~~NaG~d~~~vi~kl~~~~~~ 525 (595)
|++++|+++++|+|||||++|++++++|+++++ +.++.+| +++++|++||+.||++||+|||+|+.+++++++.. +.
T Consensus 398 Al~a~r~a~~~gvVpGGGa~e~~~s~~L~~~~~~~~~g~~~-~~i~~~a~AL~~ip~~La~NaG~d~~~v~~~l~~~-~~ 475 (529)
T CHL00093 398 AINATKAAVEEGIVPGGGATLVHLSENLKTWAKNNLKEDEL-IGALIVARAILAPLKRIAENAGKNGSVIIEKVQEQ-DF 475 (529)
T ss_pred HHHHHHHHHHcCcccCCcHHHHHHHHHHHHHhccCCChHHH-HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHcc-CC
Confidence 999999999999999999999999999999876 5666555 89999999999999999999999999999999764 56
Q ss_pred ceeeecCCCccccccccCcccchHHHHHHHHHHHHHHHHHhchhHHhhccCC
Q 007643 526 KYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKE 577 (595)
Q Consensus 526 ~~Gid~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~~ 577 (595)
++|||+.+|+++||++.|||||+.||.++|++|+++|++||+||++|+.+|+
T Consensus 476 ~~G~d~~~g~~~d~~~~GI~Dp~~vk~~al~~A~e~a~~iL~id~ii~~~~~ 527 (529)
T CHL00093 476 EIGYNAANNKFVNMYEAGIIDPAKVTRSALQNAASIASMILTTECIIVDKKE 527 (529)
T ss_pred CEeEECCCCcccchHhccCEEcHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 8999999999999999999999999999999999999999999999998763
No 10
>TIGR02348 GroEL chaperonin GroL. This family consists of GroEL, the larger subunit of the GroEL/GroES cytosolic chaperonin. It is found in bacteria, organelles derived from bacteria, and occasionally in the Archaea. The bacterial GroEL/GroES group I chaperonin is replaced a group II chaperonin, usually called the thermosome in the Archaeota and CCT (chaperone-containing TCP) in the Eukaryota. GroEL, thermosome subunits, and CCT subunits all fall under the scope of Pfam model pfam00118.
Probab=100.00 E-value=1.2e-104 Score=882.36 Aligned_cols=508 Identities=60% Similarity=0.894 Sum_probs=485.4
Q ss_pred cccccCCcHHHHHHHHHHHHHHHHhhhhccCcCCCceeeecCCCCcEEecChHHHhccccccCccchHHHHHHHHHHHhc
Q 007643 64 KDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKT 143 (595)
Q Consensus 64 k~~~f~~~~~~~~~~~~~v~~la~~v~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~l~l~hP~enigakLl~~~a~~q 143 (595)
|.++|+ +++|+.+++|+..++++|+|||||+||+|||+++.|+++|||||+||+|+|+++||++|+||+|++++|++|
T Consensus 2 ~~~~~~--~~a~~~~~~~~~~la~~v~ttlGP~G~~kmi~~~~g~~~iTnDG~tIlk~i~~~hp~~~~~akll~~~a~~q 79 (524)
T TIGR02348 2 KQIKFD--EEARKALLRGVDKLADAVKVTLGPKGRNVVLEKSFGAPTITKDGVTVAKEIELEDKFENMGAQLVKEVASKT 79 (524)
T ss_pred cccccc--HHHHHHHHHHHHHHHHHhccCcCCCCCcEEEECCCCCeeEeccHHHHHHHccCCChhhHHHHHHHHHHHHcc
Confidence 679999 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCcchHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHcccccCCch-HHHHHHhhhcCChhHHHHH
Q 007643 144 NDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEVGNM 222 (595)
Q Consensus 144 d~~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~-~L~~va~ts~~~~~~ls~l 222 (595)
|+++||||||+|+|+++||+++.+++++|+||..|++||+.|++.++++|+++++++++. +|.++|+||++++++++++
T Consensus 80 d~e~GDGTTtvviLa~~Ll~~a~~li~~GihP~~Ii~G~~~A~~~~l~~L~~~s~~~~~~~~l~~va~ts~~~~~~l~~l 159 (524)
T TIGR02348 80 NDVAGDGTTTATVLAQAIVKEGLKNVAAGANPIELKRGIEKAVEAAVEELKKLSKPVKGKKEIAQVATISANNDEEIGSL 159 (524)
T ss_pred CceeCCCcchHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhccChHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999876 8999999999999999999
Q ss_pred HHHHHHhhccCCcEEeeCCCcccceeEEEeeeEEeecccCCccccCcccCcccccCeeEEEecccCCCHHHHHHHHHHHH
Q 007643 223 IAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAI 302 (595)
Q Consensus 223 i~~Av~~v~~~g~I~v~~G~~~~ds~~li~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~~~~~i~~~le~i~ 302 (595)
+++|+..+++++.|.++.|+..+|.+++++|++|+++|.+|||.++++++++.++||+|+++|+++++++++.++++.+.
T Consensus 160 v~~A~~~v~~~~~i~v~~g~~~~~~s~~v~G~~~~~g~~~~~~~~~~~~~~~~~~n~~Ili~d~~i~~~~~i~~~l~~i~ 239 (524)
T TIGR02348 160 IAEAMEKVGKDGVITVEESKSLETELEVVEGMQFDRGYISPYFVTDAEKMEVELENPYILITDKKISNIKDLLPLLEKVA 239 (524)
T ss_pred HHHHHHHhCcCCcEeeecCCCccccEEEEEeEEEcCCCCCcccccCccCCeEEeeCceeeeccCCcCCHHHHHHHHHHHH
Confidence 99999999988888888898886766999999999999999999998899999999999999999999999999999999
Q ss_pred HcCCCEEEEeccccHHHHHHHHHHhhcccceeEEeeCCCcccchhhhHHHHHHHhCCeEeecCCCccccCCCCCCceeee
Q 007643 303 RGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNAS 382 (595)
Q Consensus 303 ~~g~~lvIi~~~i~~~aL~~L~~n~~~g~~~i~av~~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~ 382 (595)
+.|+||||++++|+++|+++|+.|+++|+++|+|||+|++++.++++|+|||++|||++++++.|++++++++++||+|+
T Consensus 240 ~~g~~lvi~~~~i~~~al~~l~~n~~~~~~~i~avr~~~~~~~r~~~l~~ia~~tG~~~i~~~~~~~~~~~~~~~LG~~~ 319 (524)
T TIGR02348 240 QSGKPLLIIAEDVEGEALATLVVNKLRGTLNVCAVKAPGFGDRRKAMLEDIAILTGGQVISEELGLKLEEVTLDDLGKAK 319 (524)
T ss_pred HhCcCEEEECCCCChHHHHHHHHhhcccccceEEEECCCccchhhhhHHHHHHHhCCEEecccccCCcCcCCHHHCCCce
Confidence 99999999999999999999999999999999999999999999999999999999999999888899999999999999
Q ss_pred EEEEecCeEEEEccCCCchhhhhHHHHHHHHHHhhchHHHHHHHHHHHHHhcCcHHHHH-------------HHHHHHHH
Q 007643 383 KVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQ-------------LRVEDALN 449 (595)
Q Consensus 383 ~v~i~~~~~~ii~~~~~~~~i~~r~~~lr~~l~~~~~~~~~e~L~ERi~~l~gg~a~i~-------------~~i~Dal~ 449 (595)
.|++.++.++++.+++++..+..|+++|+..++++.+++++++|+|||+||+|++++|. |+++||++
T Consensus 320 ~v~~~~~~~~~i~~~~~~~~~~~ri~~l~~~~~~~~~~~~~~~l~eR~~~l~~~~~tI~irG~t~~~l~E~er~i~Dal~ 399 (524)
T TIGR02348 320 KVTVDKDNTTIVEGAGDKAAIKARVAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIKVGAATETEMKEKKLRVEDALN 399 (524)
T ss_pred EEEEeecEEEEEcCCCCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999888888999999999999999999999999999999999977433 99999999
Q ss_pred HHHHHHHcCccccchHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhHHHHHHHHhcCCchHHHHHHhhhcCCCceee
Q 007643 450 ATKAAVEEGIVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGY 529 (595)
Q Consensus 450 ~~k~al~~gvVpGGGa~e~~ls~~L~~~~~~~~~~~q~~~i~~~a~AL~~ip~~L~~NaG~d~~~vi~kl~~~~~~~~Gi 529 (595)
++|+++++|||||||++|++++.+|++ ..+.++.+ ++++++|++||+.||++||+|||+|+.+++++|++. +.++||
T Consensus 400 ~~r~a~~~g~VpGGGa~e~~~s~~L~~-~~~~~~~~-~~~~~~~a~AL~~ip~~La~NaG~d~~~v~~~l~~~-~~~~G~ 476 (524)
T TIGR02348 400 ATRAAVEEGIVPGGGVALLRAAAALEG-LKGDNEDE-AIGIDIVKRALEAPLRQIAENAGKDGAVVAEKVKES-KGNFGF 476 (524)
T ss_pred HHHHHHhcCCccCCcHHHHHHHHHHHH-hccCChHH-HHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhc-CCCeeE
Confidence 999999999999999999999999998 65566655 489999999999999999999999999999999865 335999
Q ss_pred ecCCCccccccccCcccchHHHHHHHHHHHHHHHHHhchhHHhhccC
Q 007643 530 NAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIK 576 (595)
Q Consensus 530 d~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~ 576 (595)
|+.+|++.||++.|||||+.||.++|+.|+++|++||++|++|...|
T Consensus 477 d~~~g~~~d~~~~gI~Dp~~vk~~al~~A~~~a~~iL~id~ii~~~~ 523 (524)
T TIGR02348 477 NAATGEYEDLVEAGIIDPTKVTRSALQNAASIAGLLLTTEAVVADKP 523 (524)
T ss_pred eCcCCcccchhhccCEEcHHHHHHHHHHHHHHHHHHHhHHHHhhcCC
Confidence 99999999999999999999999999999999999999999997654
No 11
>cd03344 GroEL GroEL_like type I chaperonin. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings, each composed of 7-9 subunits. The symmetry of type I is seven-fold and they are found in eubacteria (GroEL) and in organelles of eubacterial descent (hsp60 and RBP). With the aid of cochaperonin GroES, GroEL encapsulates non-native substrate proteins inside the cavity of the GroEL-ES complex and promotes folding by using energy derived from ATP hydrolysis.
Probab=100.00 E-value=3.8e-103 Score=868.88 Aligned_cols=505 Identities=62% Similarity=0.929 Sum_probs=484.8
Q ss_pred cccccCCcHHHHHHHHHHHHHHHHhhhhccCcCCCceeeecCCCCcEEecChHHHhccccccCccchHHHHHHHHHHHhc
Q 007643 64 KDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKT 143 (595)
Q Consensus 64 k~~~f~~~~~~~~~~~~~v~~la~~v~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~l~l~hP~enigakLl~~~a~~q 143 (595)
|++.|| .+++..++++|..|+++|+|||||+||+|||++++|+|+|||||+||+|+|+++||.+|+||+|++++|++|
T Consensus 1 ~~~~~g--~~a~~~~i~~~~~l~~~v~ttlGP~G~~kmi~~~~g~~~iTnDG~tIlk~i~~~hp~~~~~a~ll~~~a~~q 78 (520)
T cd03344 1 KDIKFG--EEARKALLRGVNKLADAVKVTLGPKGRNVVIEKSFGSPKITKDGVTVAKEIELEDPFENMGAQLVKEVASKT 78 (520)
T ss_pred Ccccch--HHHHHHHHHHHHHHHHHHhCCcCCCCCcEEEECCCCCeEEEecHHHHHHHcccCCcchhHHHHHHHHHHhhh
Confidence 468899 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCcchHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHcccccCCch-HHHHHHhhhcCChhHHHHH
Q 007643 144 NDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEVGNM 222 (595)
Q Consensus 144 d~~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~-~L~~va~ts~~~~~~ls~l 222 (595)
|+++||||||+|+|+++||+++.+++++|+||..|++||+.|.+.++++|+++++++++. +|.++|+||++++++++++
T Consensus 79 d~e~GDGTTtvviLa~~Ll~~~~~li~~gi~p~~I~~G~~~a~~~~~~~L~~~~~~i~~~~~l~~va~ts~~~~~~l~~l 158 (520)
T cd03344 79 NDVAGDGTTTATVLARAIIKEGLKAVAAGANPMDLKRGIEKAVEAVVEELKKLSKPVKTKEEIAQVATISANGDEEIGEL 158 (520)
T ss_pred ccccCCCcchHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCChHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999866 8999999999999999999
Q ss_pred HHHHHHhhccCCcEEeeCCCcccceeEEEeeeEEeecccCCccccCcccCcccccCeeEEEecccCCCHHHHHHHHHHHH
Q 007643 223 IAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAI 302 (595)
Q Consensus 223 i~~Av~~v~~~g~I~v~~G~~~~ds~~li~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~~~~~i~~~le~i~ 302 (595)
+++|+..+++++.|.+++|++++|++++++|++|+++|.+|||.++|++|+++++||+|+++|+++++++++.++++.+.
T Consensus 159 v~~A~~~v~~~~~i~v~~g~~~~d~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~~n~~Ili~d~~l~~~~~l~~~l~~i~ 238 (520)
T cd03344 159 IAEAMEKVGKDGVITVEEGKTLETELEVVEGMQFDRGYLSPYFVTDPEKMEVELENPYILLTDKKISSIQELLPILELVA 238 (520)
T ss_pred HHHHHHHhccCCcEEEEeCCCcceeEEEEeeEEecCCCCCCccccCcccCeEEeeCCEEEEECCCCCCHHHHHHHHHHHH
Confidence 99999999988888889999999966999999999999999999998899999999999999999999999999999999
Q ss_pred HcCCCEEEEeccccHHHHHHHHHHhhcccceeEEeeCCCcccchhhhHHHHHHHhCCeEeecCCCccccCCCCCCceeee
Q 007643 303 RGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNAS 382 (595)
Q Consensus 303 ~~g~~lvIi~~~i~~~aL~~L~~n~~~g~~~i~av~~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~ 382 (595)
+.|+||||++++|+++++++|..|+++|.++++|||+|+++++++++|+|||++|||++++++.+++++++++++||+|+
T Consensus 239 ~~~~~lvi~~~~i~~~al~~l~~~~i~~~~~v~avk~~~~~~~~~~~l~~la~~tGa~~~~~~~~~~~~~~~~~~LG~~~ 318 (520)
T cd03344 239 KAGRPLLIIAEDVEGEALATLVVNKLRGGLKVCAVKAPGFGDRRKAMLEDIAILTGGTVISEELGLKLEDVTLEDLGRAK 318 (520)
T ss_pred hhCCCEEEEcCCCCHHHHHHHHHcCCccCceEEEEeCCCCCcccHHHHHHHHHHhCCEEecccccCCcccCCHHHCCcce
Confidence 99999999999999999999999999999999999999999999999999999999999998888889999999999999
Q ss_pred EEEEecCeEEEEccCCCchhhhhHHHHHHHHHHhhchHHHHHHHHHHHHHhcCcHHHHH-------------HHHHHHHH
Q 007643 383 KVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQ-------------LRVEDALN 449 (595)
Q Consensus 383 ~v~i~~~~~~ii~~~~~~~~i~~r~~~lr~~l~~~~~~~~~e~L~ERi~~l~gg~a~i~-------------~~i~Dal~ 449 (595)
+|++++++++++.+++++..++.|+.+|+.+++++.++|++++|+||++||+|++++|. |+++||++
T Consensus 319 ~v~~~~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~eR~~~l~~~~~TI~irG~t~~~l~E~~r~i~Dal~ 398 (520)
T cd03344 319 KVVVTKDDTTIIGGAGDKAAIKARIAQIRKQIEETTSDYDKEKLQERLAKLSGGVAVIKVGGATEVELKEKKDRVEDALN 398 (520)
T ss_pred EEEEeeceEEEEeCCCCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhcCCeEEEEEecCcHHHHHHHHHHHHHHHH
Confidence 99999999999999888889999999999999999999999999999999999966443 99999999
Q ss_pred HHHHHHHcCccccchHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhHHHHHHHHhcCCchHHHHHHhhhcCCCceee
Q 007643 450 ATKAAVEEGIVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGY 529 (595)
Q Consensus 450 ~~k~al~~gvVpGGGa~e~~ls~~L~~~~~~~~~~~q~~~i~~~a~AL~~ip~~L~~NaG~d~~~vi~kl~~~~~~~~Gi 529 (595)
++|+++++|||||||++|++++++|++++. .++.+| +++++|++||+.||++||+|||+|+.+++++|++.+. ++||
T Consensus 399 ~~k~a~~~g~VpGGGa~e~~~s~~L~~~~~-~~~~~~-~~~~~~a~Al~~ip~~La~NaG~d~~~vi~~l~~~~~-~~G~ 475 (520)
T cd03344 399 ATRAAVEEGIVPGGGVALLRASPALDKLKA-LNGDEK-LGIEIVRRALEAPLRQIAENAGVDGSVVVEKVLESPD-GFGY 475 (520)
T ss_pred HHHHHHhcCCCcCCcHHHHHHHHHHHHhcc-CChHHH-HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHhhcC-CEeE
Confidence 999999999999999999999999999986 666555 9999999999999999999999999999999987655 8999
Q ss_pred ecCCCccccccccCcccchHHHHHHHHHHHHHHHHHhchhHHhh
Q 007643 530 NAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVV 573 (595)
Q Consensus 530 d~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~ 573 (595)
|+.+|++.||++.|||||+.||.++|+.|+++|++||+||.+|.
T Consensus 476 d~~~g~~~d~~~~gV~Dp~~vk~~~l~~A~~~a~~iL~id~~i~ 519 (520)
T cd03344 476 DAATGEYVDMIEAGIIDPTKVVRSALQNAASVASLLLTTEALVV 519 (520)
T ss_pred ECCCCcccchHhccCeecHHHHHHHHHHHHHHHHHHHhhheEEe
Confidence 99999999999999999999999999999999999999999885
No 12
>KOG0356 consensus Mitochondrial chaperonin, Cpn60/Hsp60p [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.5e-99 Score=799.44 Aligned_cols=511 Identities=56% Similarity=0.840 Sum_probs=498.5
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhhccCcCCCceeeecCCCCcEEecChHHHhccccccCccchHHHHHHHHHHHh
Q 007643 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (595)
Q Consensus 63 ~k~~~f~~~~~~~~~~~~~v~~la~~v~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~l~l~hP~enigakLl~~~a~~ 142 (595)
+|+++|| .++|..+++|++.||++|.+||||+||+++|.+++|.|+|||||+|++++++++|+++|+||+|+++++.+
T Consensus 16 ak~i~fg--~~~r~~ll~Gv~~Ladav~~TlgpKgrnViieq~~gsPkvtkdgvTva~si~l~d~~~n~gaklvq~va~~ 93 (550)
T KOG0356|consen 16 AKDIKFG--KDVRAKLLQGVDLLADAVAVTLGPKGRNVIIEQSWGSPKVTKDGVTVAKSIELKDKYENIGAKLVQDVANN 93 (550)
T ss_pred ccccccC--HHHHHHHHhhHHHHHHHhhhhccCCcceEEcccccCCCceecCCceeeccccccchhhhhccHHHHHHHhh
Confidence 9999999 78999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCcchHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHcccccCCch-HHHHHHhhhcCChhHHHH
Q 007643 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEVGN 221 (595)
Q Consensus 143 qd~~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~-~L~~va~ts~~~~~~ls~ 221 (595)
+++.+||||||+++|+++|..++.+-+.+|.+|.+|.+|+..+.+.+++.|++++++++.. ++.+||++|+++|.++++
T Consensus 94 tN~~agdGtttatvlar~i~~eg~~~v~~G~npv~irrGi~~av~~vv~~L~k~sk~Vtt~eeIaqVAtiSAngD~~ig~ 173 (550)
T KOG0356|consen 94 TNEEAGDGTTTATVLARAIAKEGFEKVAKGANPVEIRRGIMLAVDAVVDELKKMSKPVTTPEEIAQVATISANGDKEIGN 173 (550)
T ss_pred ccCccccCcchHHHHHHHHHHHHHHHHhccCCchhhhhhHHHHHHHHHHHHHHhCCCCCCHHHHHHHHhhhcCCcHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999987 999999999999999999
Q ss_pred HHHHHHHhhccCCcEEeeCCCcccceeEEEeeeEEeecccCCccccCcccCcccccCeeEEEecccCCCHHHHHHHHHHH
Q 007643 222 MIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDA 301 (595)
Q Consensus 222 li~~Av~~v~~~g~I~v~~G~~~~ds~~li~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~~~~~i~~~le~i 301 (595)
++.+|+.+++++|+|+++.|.+++|++++++||.|++||++|||+++++..++++++|++|+.+.+|+++++|.|.||..
T Consensus 174 li~~a~~kvG~~GVItv~~gkt~~delev~eGmkfdrGyiSPyfi~~~k~~~~e~e~~~~ll~~kki~~v~~ivp~LE~A 253 (550)
T KOG0356|consen 174 LISDAMKKVGRKGVITVKDGKTLEDELEVIEGMKFDRGYISPYFITSSKKQKVEFENALLLLSEKKISSVQSIVPALELA 253 (550)
T ss_pred HHHHHHHHhCcCCeEEeecCCccccchhhhhcccccccccCccccccchhhhhhhhhhhhhhhhhhhhHHHHHhHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCEEEEeccccHHHHHHHHHHhhcccceeEEeeCCCcccchhhhHHHHHHHhCCeEeecCCC-ccccCCCCCCcee
Q 007643 302 IRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVG-LALDKVGKEVLGN 380 (595)
Q Consensus 302 ~~~g~~lvIi~~~i~~~aL~~L~~n~~~g~~~i~av~~~~~~~~~~~~L~~ia~~tGa~ii~~~~~-~~l~~~~~~~lG~ 380 (595)
.+...||||++++|+.++|.+|+.|++++.++++|||+|+||+.|++.+.|++.+||+.++.++.+ ++++...+.+||+
T Consensus 254 ~~~~~PLliIAeDi~~eaL~tLIlNkLk~glqV~AvKapgfGdnrk~~l~Diai~Tg~~v~~~e~~~l~le~~~~~dLG~ 333 (550)
T KOG0356|consen 254 LAKRRPLLIIAEDIDGEALATLVLNKLKGGLQVVAVKAPGFGDNRKNLLKDIAILTGATVFGEELSTLNLEDAKLEDLGE 333 (550)
T ss_pred hhccCceEEEehhcchhHHHHHHhhhhccceeEEEEecCCCcchHHHhhhHHHHHhhhhhhccchhhcccccCchhhcCc
Confidence 999999999999999999999999999999999999999999999999999999999999999988 8899999999999
Q ss_pred eeEEEEecCeEEEEccCCCchhhhhHHHHHHHHHHhhchHHHHHHHHHHHHHhcCcHHHHH-------------HHHHHH
Q 007643 381 ASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQ-------------LRVEDA 447 (595)
Q Consensus 381 ~~~v~i~~~~~~ii~~~~~~~~i~~r~~~lr~~l~~~~~~~~~e~L~ERi~~l~gg~a~i~-------------~~i~Da 447 (595)
|.++.++++.++++.+.+++..++.||++++..++..+++|++++|+||+++|+||+|+|+ ++++||
T Consensus 334 ~~evvvtkd~t~ll~g~~~~~~v~~rIeqik~~~e~t~~~ye~ekl~er~a~ls~gvavi~vGg~se~Ev~ekk~rv~da 413 (550)
T KOG0356|consen 334 VGEVVVTKDDTMLLKGKGNKAQVEGRIEQIKEMIEETTSDYEKEKLNERLAKLSGGVAVIKVGGHSEVEVNEKKDRVEDA 413 (550)
T ss_pred ceeEEEecCcceeeCCCCCHHHHHHHHHHHHHHHHhhhhhhhHhHHHHHHHHhcCCeEEEEecCcchhhhhhhhhhHHHH
Confidence 9999999999999999999999999999999989999999999999999999999999888 899999
Q ss_pred HHHHHHHHHcCccccchHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhHHHHHHHHhcCCchHHHHHHhhhcCCCce
Q 007643 448 LNATKAAVEEGIVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKY 527 (595)
Q Consensus 448 l~~~k~al~~gvVpGGGa~e~~ls~~L~~~~~~~~~~~q~~~i~~~a~AL~~ip~~L~~NaG~d~~~vi~kl~~~~~~~~ 527 (595)
+|++++|+++|+|||||+++++|+..|.++.. ..+.+++.|++++.+||..|..+|++|||.|+..++.|++. ..+
T Consensus 414 lnat~aaveeGivpGGG~all~~~~~l~~lk~-~~~~~~k~G~eiv~~Al~~P~~~IakNAGvdg~~vv~Kv~~---~~~ 489 (550)
T KOG0356|consen 414 LNATRAAVEEGIVPGGGTALLRAIPVLDELKA-TNNFDQKVGVEIVKKALRLPAQTIAKNAGVDGSVVVEKVLN---DDY 489 (550)
T ss_pred HHHHHHHhhcCcccCCchHHHHhhhhhhhccc-ccchHhhhhHHHHHHHHhhhHHHHHHhcCCchHHHHHHHHh---hhh
Confidence 99999999999999999999999999999875 56778889999999999999999999999999999999983 389
Q ss_pred eeecCCCccccccccCcccchHHHHHHHHHHHHHHHHHhchhHHhhccCCCC
Q 007643 528 GYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPE 579 (595)
Q Consensus 528 Gid~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~~~~ 579 (595)
|||..+++|+||++.||+||++|.++||..|..+|.++++++.+|...|+++
T Consensus 490 gyda~~~ey~dlv~~GiidP~kVvr~al~~a~~vasll~tte~vvteipk~~ 541 (550)
T KOG0356|consen 490 GYDAAKGEYVDLVEAGIIDPTKVVRTALTDAAGVASLLTTTEAVVTEIPKEE 541 (550)
T ss_pred hhhhhcccHHHHHhccCCChHHHHHHhhhhhhHHHHHHhhheeEEEeccccc
Confidence 9999999999999999999999999999999999999999999999988766
No 13
>TIGR02339 thermosome_arch thermosome, various subunits, archaeal. Thermosome is the name given to the archaeal rather than eukaryotic form of the group II chaperonin (counterpart to the group I chaperonin, GroEL/GroES, in bacterial), a torroidal, ATP-dependent molecular chaperone that assists in the folding or refolding of nascent or denatured proteins. Various homologous subunits, one to five per archaeal genome, may be designated alpha, beta, etc., but phylogenetic analysis does not show distinct alpha subunit and beta subunit lineages traceable to ancient paralogs.
Probab=100.00 E-value=1.8e-86 Score=738.71 Aligned_cols=451 Identities=26% Similarity=0.417 Sum_probs=404.2
Q ss_pred HHHHHHHHHHHHHHHHhhhhccCcCCCceeeecCCCCcEEecChHHHhccccccCccchHHHHHHHHHHHhcccccCCCc
Q 007643 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (595)
Q Consensus 72 ~~~~~~~~~~v~~la~~v~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~l~l~hP~enigakLl~~~a~~qd~~~GDGT 151 (595)
.++++.++.+|..++++++|||||+||+|||++++|+++|||||+||+|+|+++||. ++|++++|++||+++||||
T Consensus 15 ~~~~~~ni~~~~~i~~~v~tslGP~G~~k~i~~~~g~~~iTnDG~tIlk~l~~~hP~----a~ll~~~a~~qd~~~GDGT 90 (519)
T TIGR02339 15 RDAQRNNIAAAKAVAEAVKSTLGPRGMDKMLVDSLGDVTITNDGATILKEMDIEHPA----AKMLVEVAKTQDAEVGDGT 90 (519)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCCCeeeECCCCCEEEEccHHHHHHhccCCCHH----HHHHHHHHHHHHHHhCCCc
Confidence 779999999999999999999999999999999999999999999999999999998 9999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHcccccCCc--h-HHHHHHhhhcCCh-------hHHHH
Q 007643 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED--S-ELADVAAVSAGNN-------YEVGN 221 (595)
Q Consensus 152 Tt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~~--~-~L~~va~ts~~~~-------~~ls~ 221 (595)
||+|+|+++||+++.+++++|+||..|++||+.|.+.++++|++++++++. . .|.++|+|+++++ ++|++
T Consensus 91 tt~viL~~~ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~s~~v~~~~~~~L~~ia~tsl~sk~~~~~~~~~ls~ 170 (519)
T TIGR02339 91 TTAVVLAGELLEKAEDLLEQGIHPTVIIEGYRKAAEKALEIIDEIATKISPEDRDLLKKVAETSLTGKASAEVTKDKLAN 170 (519)
T ss_pred ccHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccccCcccHHHHHHHHHhhhccccccchhHHHHHH
Confidence 999999999999999999999999999999999999999999999999864 3 7999999998765 88999
Q ss_pred HHHHHHHhhcc---CCc---------EEeeCCCcccceeEEEeeeEEeecccCCccccCcccCcccccCeeEEEeccc--
Q 007643 222 MIAEAMSKVGR---KGV---------VTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKK-- 287 (595)
Q Consensus 222 li~~Av~~v~~---~g~---------I~v~~G~~~~ds~~li~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~-- 287 (595)
|+++|+.++++ +|. |...+|++++|| ++++|++|+++|.+| +|+++++||+|++++++
T Consensus 171 l~~~A~~~v~~~~~~g~~~~~~~~I~i~k~~Ggs~~ds-~lv~G~vi~~~~~~~-------~m~~~i~n~kIlll~~~Le 242 (519)
T TIGR02339 171 LVVEAVKQVAEKRGDGKYYVDLDNIKIEKKTGGSIDDT-ELVEGIVVDKEPVHP-------GMPKRVKNAKIALLDAPLE 242 (519)
T ss_pred HHHHHHHHHhhhccCCCcccCHHHeEEEEccCcChhcc-eeEeeEEEecCCCCC-------CCccccCCCcEEEEecccc
Confidence 99999999985 453 334799999999 999999999999987 37888999999999997
Q ss_pred -----------CCCHHHHHHHHH-----------HHHHcCCCEEEEeccccHHHHHHHHHHhhcccceeEEeeCCCcccc
Q 007643 288 -----------ITNARDLINVLE-----------DAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGER 345 (595)
Q Consensus 288 -----------i~~~~~i~~~le-----------~i~~~g~~lvIi~~~i~~~aL~~L~~n~~~g~~~i~av~~~~~~~~ 345 (595)
+++++++.++++ .+++.|+||||++++|++.++++|..+ ++++|+ ++
T Consensus 243 ~~~~~~~~~~~i~~~~~~~~~l~~E~~~i~~~v~~i~~~g~~lvi~~~~I~~~al~~L~~~------gI~~v~-----~v 311 (519)
T TIGR02339 243 VEKTEIDAKIRITDPDQIKKFLDQEEAMLKEMVDKIADAGANVVFCQKGIDDLAQHYLAKA------GILAVR-----RV 311 (519)
T ss_pred ccccccceEEEECCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEECCCccHHHHHHHHHC------CCEEEe-----cC
Confidence 678888777665 899999999999999999999999754 456665 67
Q ss_pred hhhhHHHHHHHhCCeEeecCCCccccCCCCCCceeeeEEEEe---cCeEEEEccCCCchhhhhHHHHHHHHHHhhchHHH
Q 007643 346 KSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLT---KDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYE 422 (595)
Q Consensus 346 ~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i~---~~~~~ii~~~~~~~~i~~r~~~lr~~l~~~~~~~~ 422 (595)
++++|+|||++|||++++ ++++++++.||+|++|++. ++.|+++.+++++..++. .|| +++. ++
T Consensus 312 ~~~~L~rIa~~tGa~ii~-----~~~~l~~~~LG~~~~v~~~~ig~~~~~~~~~~~~~~~~TI---~lr----G~t~-~~ 378 (519)
T TIGR02339 312 KKSDIEKLARATGAKIVS-----SIKEITESDLGYAGLVEERKVGDDKMTFVEGCKNPKAVTI---LLR----GGTE-HV 378 (519)
T ss_pred CHHHHHHHHHHhCCEEeC-----chhhCChhhccCCceEEEEEECCeEEEEEEcCCCCCEEEE---EEE----CCCH-HH
Confidence 799999999999999998 5888888999999999854 589999998876554431 243 3333 33
Q ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHcC-ccccchHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhHHH
Q 007643 423 REKLNERIAKLSGGVAVIQLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPL 501 (595)
Q Consensus 423 ~e~L~ERi~~l~gg~a~i~~~i~Dal~~~k~al~~g-vVpGGGa~e~~ls~~L~~~~~~~~~~~q~~~i~~~a~AL~~ip 501 (595)
.+++ +|+++||++++++++++| ||||||++||+++.+|++++++..+.++ +++++|++||+.||
T Consensus 379 l~E~--------------~r~i~DAl~~~~~~~~~~~vvpGGGa~e~~ls~~l~~~~~~~~~~~~-~~~~~~a~aL~~ip 443 (519)
T TIGR02339 379 VDEL--------------ERSIQDALHVVASALEDGKVVAGGGAVEIELALRLRSYARKIGGREQ-LAIEAFADALEEIP 443 (519)
T ss_pred HHHH--------------HHHHHHHHHHHHHHhcCCCEeeCCCHHHHHHHHHHHHHhhcCCCHHH-HHHHHHHHHHHHHH
Confidence 2322 279999999999999999 9999999999999999998877767655 89999999999999
Q ss_pred HHHHHhcCCchHHHHHHhhhc---CCCceeeecCCCccccccccCcccchHHHHHHHHHHHHHHHHHhchhHHhh
Q 007643 502 KLIAKNAGVNGSVVSEKVLSS---DNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVV 573 (595)
Q Consensus 502 ~~L~~NaG~d~~~vi~kl~~~---~~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~ 573 (595)
++|++|||+|+.+++.+|+.. ++.++|||+.+|++.||++.|||||+.||+++|+.|+|+|++||+||++|+
T Consensus 444 ~~L~~NaG~d~~~~l~~l~~~h~~~~~~~Gid~~~g~~~d~~~~gI~dp~~vk~~~l~~A~e~a~~iL~id~ii~ 518 (519)
T TIGR02339 444 RILAENAGLDPIDALVELRAKHEKGNKNAGINVFTGEIEDMLELGVIEPLRVKEQAIKSATEAATMILRIDDVIA 518 (519)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHccCCceeEEcCCCCccchhhccceEcHHHHHHHHHHHHHHHHHHHhHhHHhh
Confidence 999999999999999999753 346799999999999999999999999999999999999999999999985
No 14
>cd03343 cpn60 cpn60 chaperonin family. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. Archaeal cpn60 (thermosome), together with TF55 from thermophilic bacteria and the eukaryotic cytosol chaperonin (CTT), belong to the type II group of chaperonins. Cpn60 consists of two stacked octameric rings, which are composed of one or two different subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis.
Probab=100.00 E-value=2.8e-86 Score=737.48 Aligned_cols=456 Identities=25% Similarity=0.398 Sum_probs=407.4
Q ss_pred cccCCcHHHHHHHHHHHHHHHHhhhhccCcCCCceeeecCCCCcEEecChHHHhccccccCccchHHHHHHHHHHHhccc
Q 007643 66 LHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTND 145 (595)
Q Consensus 66 ~~f~~~~~~~~~~~~~v~~la~~v~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~l~l~hP~enigakLl~~~a~~qd~ 145 (595)
-.+| .+++..++++|..++++|++||||+||+|||++++|+++|||||+||+++|+++||. |+|++++|++||+
T Consensus 10 ~~~~--~~~~~~n~~~~~~i~~~v~tslGP~G~~k~i~~~~g~~~iTnDG~tIlk~l~~~hP~----a~ll~~~a~~q~~ 83 (517)
T cd03343 10 RTSG--RDAQRMNIAAAKAVAEAVRTTLGPKGMDKMLVDSLGDVTITNDGATILKEMDIEHPA----AKMLVEVAKTQDE 83 (517)
T ss_pred cccH--HHHHHHHHHHHHHHHHHHhCCCCCCCCCceeEcCCCCEEEEccHHHHHHHccCcCHH----HHHHHHHHHHHHH
Confidence 4455 789999999999999999999999999999999999999999999999999999998 9999999999999
Q ss_pred ccCCCcchHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHcccccCC--ch-HHHHHHhhhcCCh------
Q 007643 146 LAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE--DS-ELADVAAVSAGNN------ 216 (595)
Q Consensus 146 ~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~--~~-~L~~va~ts~~~~------ 216 (595)
++||||||+|+|+++||+++.+++++|+||..|++||++|.+.++++|++++++++ +. .|.+||+||++++
T Consensus 84 ~~GDGTtt~viLa~~ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~~~l~~va~ts~~sk~~~~~~ 163 (517)
T cd03343 84 EVGDGTTTAVVLAGELLEKAEDLLDQNIHPTVIIEGYRLAAEKALELLDEIAIKVDPDDKDTLRKIAKTSLTGKGAEAAK 163 (517)
T ss_pred HhCCChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHhhcccchhhHH
Confidence 99999999999999999999999999999999999999999999999999999986 44 8999999999865
Q ss_pred hHHHHHHHHHHHhhccCCc---------EEe--eCCCcccceeEEEeeeEEeecccCCccccCcccCcccccCeeEEEec
Q 007643 217 YEVGNMIAEAMSKVGRKGV---------VTL--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVD 285 (595)
Q Consensus 217 ~~ls~li~~Av~~v~~~g~---------I~v--~~G~~~~ds~~li~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d 285 (595)
+.|++++++|+.++++++. |.+ .+|++++|| ++++|++|+++|.+|+ |++.++||+|++++
T Consensus 164 ~~l~~l~~~A~~~v~~~~~~~~~~~~~~I~i~k~~Ggs~~ds-~lv~G~v~~~~~~~~~-------m~~~~~n~~Illl~ 235 (517)
T cd03343 164 DKLADLVVDAVLQVAEKRDGKYVVDLDNIKIEKKTGGSVDDT-ELIRGIVIDKEVVHPG-------MPKRVENAKIALLD 235 (517)
T ss_pred HHHHHHHHHHHHHhhhccCCCccccHHHeeEEeecCcCHHHc-ceeeeEEEeccCCCCC-------CccccCCCcEEEEe
Confidence 8999999999999976532 555 799999999 9999999999999987 45678999999999
Q ss_pred cc-------------CCCHHHHHHH-----------HHHHHHcCCCEEEEeccccHHHHHHHHHHhhcccceeEEeeCCC
Q 007643 286 KK-------------ITNARDLINV-----------LEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPG 341 (595)
Q Consensus 286 ~~-------------i~~~~~i~~~-----------le~i~~~g~~lvIi~~~i~~~aL~~L~~n~~~g~~~i~av~~~~ 341 (595)
++ +++++++.++ ++.+++.|+||||++++|+++++++|..+ ++++|+
T Consensus 236 ~~Le~~k~~~~~~~~i~s~~~~~~~~~~E~~~i~~~v~~i~~~g~~lvi~~~~I~~~al~~l~~~------gI~~v~--- 306 (517)
T cd03343 236 APLEVKKTEIDAKIRITSPDQLQAFLEQEEAMLKEMVDKIADTGANVVFCQKGIDDLAQHYLAKA------GILAVR--- 306 (517)
T ss_pred ccccCCccccceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCccHHHHHHHhHC------CcEEEE---
Confidence 98 5777777654 45899999999999999999999999754 456776
Q ss_pred cccchhhhHHHHHHHhCCeEeecCCCccccCCCCCCceeeeEEEEe---cCeEEEEccCCCchhhhhHHHHHHHHHHhhc
Q 007643 342 FGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLT---KDTTTIVGDGSTQDAVSKRVAQIRTLIENAE 418 (595)
Q Consensus 342 ~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i~---~~~~~ii~~~~~~~~i~~r~~~lr~~l~~~~ 418 (595)
++++++|+|||++|||++++ ++++++++.||+|++|++. ++.|+++.+++++..++. .|| +++
T Consensus 307 --~v~~~~l~~Ia~~tGa~ii~-----~~~~l~~~~LG~~~~v~~~~ig~~~~~~~~~~~~~~~~TI---~lr----G~t 372 (517)
T cd03343 307 --RVKKSDMEKLARATGAKIVT-----NIDDLTPEDLGEAELVEERKVGDDKMVFVEGCKNPKAVTI---LLR----GGT 372 (517)
T ss_pred --eCCHHHHHHHHHHhCCEEec-----chhhCChhhCCccceEEEEEECCeEEEEEEcCCCCceEEE---EEE----CCc
Confidence 67799999999999999998 6888989999999999854 889999988877654321 243 333
Q ss_pred hHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHcC-ccccchHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHH
Q 007643 419 QDYEREKLNERIAKLSGGVAVIQLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRAL 497 (595)
Q Consensus 419 ~~~~~e~L~ERi~~l~gg~a~i~~~i~Dal~~~k~al~~g-vVpGGGa~e~~ls~~L~~~~~~~~~~~q~~~i~~~a~AL 497 (595)
. ++.++. +|+++||++++|+++++| ||||||++||+++.+|++++++.++.+| +++++|++||
T Consensus 373 ~-~~l~e~--------------~~~l~Dal~~~~~~~~~~~vvpGGG~~e~~ls~~L~~~~~~~~~~~~-~~~~~~~~aL 436 (517)
T cd03343 373 E-HVVDEL--------------ERALEDALRVVADALEDGKVVAGGGAVEIELAKRLREYARSVGGREQ-LAVEAFADAL 436 (517)
T ss_pred H-HHHHHH--------------HHHHHHHHHHHHHHHhCCCeeeCCCHHHHHHHHHHHHHHhcCCCHHH-HHHHHHHHHH
Confidence 3 322222 279999999999999999 9999999999999999998877767655 8999999999
Q ss_pred hHHHHHHHHhcCCchHHHHHHhhhc---CCCceeeecCCCccccccccCcccchHHHHHHHHHHHHHHHHHhchhHHhhc
Q 007643 498 CYPLKLIAKNAGVNGSVVSEKVLSS---DNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVE 574 (595)
Q Consensus 498 ~~ip~~L~~NaG~d~~~vi~kl~~~---~~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~~ 574 (595)
+.||++|++|||+|+.+++.+|+.. ++.++|||+.+|++.||++.|||||+.||+++|+.|+|+|++||+||++|+.
T Consensus 437 ~~ip~~L~~NaG~d~~~~~~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~~l~~A~e~a~~iL~id~ii~~ 516 (517)
T cd03343 437 EEIPRTLAENAGLDPIDTLVELRAAHEKGNKNAGLDVYTGEVVDMLEKGVIEPLRVKKQAIKSATEAATMILRIDDVIAA 516 (517)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHccCCceeeecCCCCccchhhcCceecHHHHHHHHHHHHHHHHHHHhhhHhhhC
Confidence 9999999999999999999999753 3467999999999999999999999999999999999999999999999965
No 15
>cd03335 TCP1_alpha TCP-1 (CTT or eukaryotic type II) chaperonin family, alpha subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=2.8e-86 Score=738.09 Aligned_cols=459 Identities=25% Similarity=0.351 Sum_probs=402.7
Q ss_pred HHHHHHHHHHHHHHHHhhhhccCcCCCceeeecCCCCcEEecChHHHhccccccCccchHHHHHHHHHHHhcccccCCCc
Q 007643 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (595)
Q Consensus 72 ~~~~~~~~~~v~~la~~v~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~l~l~hP~enigakLl~~~a~~qd~~~GDGT 151 (595)
+++|..|++||..|+++|++||||+||+|||+++.|+++|||||+||+++|+++||+ |+|++++|++||+++||||
T Consensus 7 ~~~~~~ni~a~~~l~~~v~tslGP~G~~kmi~~~~g~~~iTnDG~tIlk~i~~~hP~----akll~~~a~~q~~~~GDGT 82 (527)
T cd03335 7 QDVRTQNVTAAMAIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPA----AKILVELAQLQDKEVGDGT 82 (527)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcCCCcCceEEEcCCCCEEEeCcHHHHHHhccccChH----HHHHHHHHHHHHHHhCCCc
Confidence 789999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHc-ccccCC--ch-HHHHHHhhhcC------ChhHHHH
Q 007643 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQ-MSKEVE--DS-ELADVAAVSAG------NNYEVGN 221 (595)
Q Consensus 152 Tt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~-~s~~v~--~~-~L~~va~ts~~------~~~~ls~ 221 (595)
||+|||+++||+++.+++++|+||..|++||+.|.+.++++|++ ++++++ +. .|.++|+|+++ ..+.|++
T Consensus 83 Tt~vvLa~~ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~l~~ia~tsl~sK~~~~~~~~ls~ 162 (527)
T cd03335 83 TSVVIIAAELLKRANELVKQKIHPTTIISGYRLACKEAVKYIKEHLSISVDNLGKESLINVAKTSMSSKIIGADSDFFAN 162 (527)
T ss_pred chHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhccCCCccCHHHHHHHHHHHhcccccchhHHHHHH
Confidence 99999999999999999999999999999999999999999996 899986 44 79999999987 2489999
Q ss_pred HHHHHHHhhcc---CCc---------EEeeCCCcccceeEEEeeeEEeecccCCccccCcccCcccccCeeEEEecccCC
Q 007643 222 MIAEAMSKVGR---KGV---------VTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKIT 289 (595)
Q Consensus 222 li~~Av~~v~~---~g~---------I~v~~G~~~~ds~~li~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~ 289 (595)
++++|+..++. +|. |.+.+|++++|+ ++++|++|+++|.+| +|+++++||+|+++++++.
T Consensus 163 l~~~A~~~v~~~~~~~~~~~~~~~I~i~~~~Ggs~~~s-~li~Givi~~~~~~~-------~m~~~i~n~kIlll~~~Le 234 (527)
T cd03335 163 MVVDAILAVKTTNEKGKTKYPIKAVNILKAHGKSAKES-YLVNGYALNCTRASQ-------GMPTRVKNAKIACLDFNLQ 234 (527)
T ss_pred HHHHHHHHhhcccccCCCccCHHHeEEEEecCcChhhc-ceeeeEEEecccCCC-------CCcccccCCcEEEEeccCC
Confidence 99999999952 232 335689999998 999999999999886 4788999999999998764
Q ss_pred C-------------HHH-----------HHHHHHHHHHcCCCEEEEeccccHHHHHHHHHHhhcccceeEEeeCCCcccc
Q 007643 290 N-------------ARD-----------LINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGER 345 (595)
Q Consensus 290 ~-------------~~~-----------i~~~le~i~~~g~~lvIi~~~i~~~aL~~L~~n~~~g~~~i~av~~~~~~~~ 345 (595)
. +.+ +.++++.+.+.|+||||++++|++.++++|..+ +|++++ ++
T Consensus 235 ~~~~~~~~~~~~~~~~~le~~~~~E~~~l~~~i~~i~~~g~~lvi~~k~I~d~al~~L~~~------~I~~v~-----~v 303 (527)
T cd03335 235 KTKMKLGVQVVVTDPEKLEKIRQRESDITKERIKKILAAGANVVLTTGGIDDMCLKYFVEA------GAMAVR-----RV 303 (527)
T ss_pred CCccccceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEeCCCCcHHHHHHHHHC------CcEEEE-----eC
Confidence 3 222 235678888999999999999999999999886 567776 67
Q ss_pred hhhhHHHHHHHhCCeEeecCCCcc-ccCCCCCCceeeeEEE---EecCeEEEEccCCCchhhhhHHHHHHHHHHhhchHH
Q 007643 346 KSQYLDDIAILTGGTVIRDEVGLA-LDKVGKEVLGNASKVV---LTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDY 421 (595)
Q Consensus 346 ~~~~L~~ia~~tGa~ii~~~~~~~-l~~~~~~~lG~~~~v~---i~~~~~~ii~~~~~~~~i~~r~~~lr~~l~~~~~~~ 421 (595)
++++|+|||++|||+++++..+++ .+++++++||+|++|+ +++++|+++.++++....+. .|| +++ ++
T Consensus 304 ~~~~lerIa~~tGa~ii~~~~~l~~~~~~~~~~LG~~~~v~~~~ig~~~~~~i~g~~~~~~~TI---llr----G~t-~~ 375 (527)
T cd03335 304 KKEDLRRIAKATGATLVSTLANLEGEETFDPSYLGEAEEVVQERIGDDELILIKGTKKRSSASI---ILR----GAN-DF 375 (527)
T ss_pred CHHHHHHHHHHhCCEEecChhhcCcccccCHhhCccCceEEEEEECCeEEEEEEcCCCCCEEEE---EEe----CCc-HH
Confidence 789999999999999999644332 2345667899999998 78899999998876544321 243 333 33
Q ss_pred HHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHcC-ccccchHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhHH
Q 007643 422 EREKLNERIAKLSGGVAVIQLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYP 500 (595)
Q Consensus 422 ~~e~L~ERi~~l~gg~a~i~~~i~Dal~~~k~al~~g-vVpGGGa~e~~ls~~L~~~~~~~~~~~q~~~i~~~a~AL~~i 500 (595)
+.++++ |+++||++++++++++| +|||||++|++++.+|++++++.++.+| +++++|++||+.|
T Consensus 376 ~l~e~e--------------r~i~Dal~~~~~~~~~~~vvpGGGa~e~~ls~~L~~~~~~~~~~~~-~~i~~~a~aL~~i 440 (527)
T cd03335 376 MLDEME--------------RSLHDALCVVKRTLESNSVVPGGGAVETALSIYLENFATTLGSREQ-LAIAEFAEALLVI 440 (527)
T ss_pred HHHHHH--------------HHHHHHHHHHHHHhhCCCEeeCCCHHHHHHHHHHHHHHhccCcHHH-HHHHHHHHHHHHH
Confidence 333222 79999999999999999 9999999999999999999877766665 8999999999999
Q ss_pred HHHHHHhcCCchHHHHHHhhhcC-----------CCceeeecCCCccccccccCcccchHHHHHHHHHHHHHHHHHhchh
Q 007643 501 LKLIAKNAGVNGSVVSEKVLSSD-----------NHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSD 569 (595)
Q Consensus 501 p~~L~~NaG~d~~~vi~kl~~~~-----------~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD 569 (595)
|++||+|||+|+.+++.+|++.| ++++|||+.+|++.||++.|||||+.+|.++|+.|+|+|++|||||
T Consensus 441 p~~La~NaG~d~~~~~~~l~~~h~~~~~~~~~~~~~~~Gid~~~g~~~d~~~~gV~dp~~~k~~~i~~A~e~a~~iLrID 520 (527)
T cd03335 441 PKTLAVNAAKDATELVAKLRAYHAAAQVKPDKKHLKWYGLDLINGKVRDNLEAGVLEPTVSKIKSLKFATEAAITILRID 520 (527)
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHhcCCccccccCceEeEECCCCcccchhhccceecHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999997632 3578999999999999999999999999999999999999999999
Q ss_pred HHhhccC
Q 007643 570 CVVVEIK 576 (595)
Q Consensus 570 ~iI~~~~ 576 (595)
++|...|
T Consensus 521 ~ii~~~~ 527 (527)
T cd03335 521 DLIKLNP 527 (527)
T ss_pred ceeecCC
Confidence 9997754
No 16
>cd03342 TCP1_zeta TCP-1 (CTT or eukaryotic type II) chaperonin family, zeta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=1.5e-86 Score=732.53 Aligned_cols=447 Identities=24% Similarity=0.369 Sum_probs=398.9
Q ss_pred HHHHHHHHHHHHHHHHhhhhccCcCCCceeeecCCCCcEEecChHHHhccccccCccchHHHHHHHHHHHhcccccCCCc
Q 007643 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (595)
Q Consensus 72 ~~~~~~~~~~v~~la~~v~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~l~l~hP~enigakLl~~~a~~qd~~~GDGT 151 (595)
.+++..|+.+|..|+++|+|||||+||+|||++++|+++|||||+||+++|+++||+ ++|+.++|++||+++||||
T Consensus 11 ~~~~~~ni~a~~~l~~~vkttlGP~G~~kmi~~~~g~~~iTnDG~tIlk~i~~~hP~----a~l~~~~a~~qd~~~GDGT 86 (484)
T cd03342 11 GQALAVNISAAKGLQDVLKTNLGPKGTLKMLVSGAGDIKLTKDGNVLLSEMQIQHPT----ASMIARAATAQDDITGDGT 86 (484)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcCCCCCceEEECCCCCEEEeccHHHHHHhccCcCHH----HHHHHHHHHHhhhHhCCCh
Confidence 779999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHcccccCC---ch-HHHHHHhhhcCCh------hHHHH
Q 007643 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE---DS-ELADVAAVSAGNN------YEVGN 221 (595)
Q Consensus 152 Tt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~---~~-~L~~va~ts~~~~------~~ls~ 221 (595)
||+++|+++||+++.+++++|+||..|++||++|.+.++++|++++++++ +. .|.+||++|++++ +.|++
T Consensus 87 Tt~vvLa~~Ll~~a~~li~~gi~P~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~~~~l~~va~ts~~sk~~~~~~~~l~~ 166 (484)
T cd03342 87 TSNVLLIGELLKQAERYIQEGVHPRIITEGFELAKNKALKFLESFKVPVEIDTDRELLLSVARTSLRTKLHADLADQLTE 166 (484)
T ss_pred hhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHhCcccchhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999987 45 8999999999875 89999
Q ss_pred HHHHHHHhhccCC-c-------EEeeCCCcccceeEEEeeeEEeecccCCccccCcccCcccccCeeEEEecccCCCHHH
Q 007643 222 MIAEAMSKVGRKG-V-------VTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARD 293 (595)
Q Consensus 222 li~~Av~~v~~~g-~-------I~v~~G~~~~ds~~li~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~~~~~ 293 (595)
++++|+..+++++ . |...+|+++.|+ ++++|++|+++|.+|+ |+++++||+|+++|+++...+.
T Consensus 167 l~~~A~~~v~~~~~~~~~~~I~i~ki~ggs~~ds-~~i~G~~~~~~~~~~~-------m~~~~~n~~Ill~~~~le~~~~ 238 (484)
T cd03342 167 IVVDAVLAIYKPDEPIDLHMVEIMQMQHKSDSDT-KLIRGLVLDHGARHPD-------MPKRVENAYILTCNVSLEYEKT 238 (484)
T ss_pred HHHHHHHHHhhcCCccChhHeEEEEecCCChhhc-eEEeeEEEecCCCCCC-------CCccccCceEEEEeCCCCCCcc
Confidence 9999999998765 1 344689999999 9999999999999987 4678899999999999877653
Q ss_pred -HHHHHHHHHHcCCCEEEEeccccHHHHHHHHHHhhcccceeEEeeCCCcccchhhhHHHHHHHhCCeEeecCCCccccC
Q 007643 294 -LINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDK 372 (595)
Q Consensus 294 -i~~~le~i~~~g~~lvIi~~~i~~~aL~~L~~n~~~g~~~i~av~~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~ 372 (595)
+... ...+|||++++|++.++++|..| +|+||+ ++++++|+|||++|||++++ ++++
T Consensus 239 ~~~~~------~~~~lvi~~~~I~~~al~~l~~~------~I~av~-----~~~~~~l~~ia~~tGa~ii~-----~l~~ 296 (484)
T cd03342 239 EVNSG------FFYSVVINQKGIDPPSLDMLAKE------GILALR-----RAKRRNMERLTLACGGVAMN-----SVDD 296 (484)
T ss_pred ccCcE------EEEEEEEeCCCccHHHHHHHHHC------CCeEEE-----eCCHHHHHHHHHHhCCEEec-----cccc
Confidence 2211 12469999999999999999988 478888 46688999999999999999 6899
Q ss_pred CCCCCceeeeEE---EEecCeEEEEccCCCchhhhhHHHHHHHHHHhhchHHHHHHHHHHHHHhcCcHHHHHHHHHHHHH
Q 007643 373 VGKEVLGNASKV---VLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQLRVEDALN 449 (595)
Q Consensus 373 ~~~~~lG~~~~v---~i~~~~~~ii~~~~~~~~i~~r~~~lr~~l~~~~~~~~~e~L~ERi~~l~gg~a~i~~~i~Dal~ 449 (595)
+++++||+|++| ++++++|+++.+++++...+. .|| +++ +++.++++ |+++||++
T Consensus 297 ~~~~~LG~~~~v~~~~ig~~~~~~i~~~~~~~~~tI---~lr----g~t-~~~l~E~e--------------r~l~DAl~ 354 (484)
T cd03342 297 LSPECLGYAGLVYERTLGEEKYTFIEGVKNPKSCTI---LIK----GPN-DHTITQIK--------------DAIRDGLR 354 (484)
T ss_pred CChhhCcccceEEEEEECCeEEEEEECCCCCcEEEE---EEe----CCC-HHHHHHHH--------------HHHHHHHH
Confidence 999999999999 578899999998876544321 243 333 33333222 79999999
Q ss_pred HHHHHHHcC-ccccchHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhHHHHHHHHhcCCchHHHHHHhhhc---CCC
Q 007643 450 ATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSS---DNH 525 (595)
Q Consensus 450 ~~k~al~~g-vVpGGGa~e~~ls~~L~~~~~~~~~~~q~~~i~~~a~AL~~ip~~L~~NaG~d~~~vi~kl~~~---~~~ 525 (595)
++++++++| +|||||++|++++.+|++++++.++.+| +++++|++||+.||++|++|||+|+.+++.+|+.. ++.
T Consensus 355 ~vk~~~~~~~~vpGGGa~e~~ls~~L~~~~~~~~~~~~-~~i~~~a~Al~~ip~~La~NaG~d~~~~l~~l~~~h~~~~~ 433 (484)
T cd03342 355 AVKNAIEDKCVVPGAGAFEVALYAHLKEFKKSVKGKAK-LGVQAFADALLVIPKTLAENSGLDVQETLVKLQDEYAEGGQ 433 (484)
T ss_pred HHHHHhcCCcEEeCCCHHHHHHHHHHHHHhhcCCCHHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHccCC
Confidence 999999999 9999999999999999999877767655 89999999999999999999999999999999754 356
Q ss_pred ceeeecCCCccccccccCcccchHHHHHHHHHHHHHHHHHhchhHHhhcc
Q 007643 526 KYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEI 575 (595)
Q Consensus 526 ~~Gid~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~~~ 575 (595)
++|||+.+|++.||++.|||||+.||+++|+.|+|+|++|||||++|+.+
T Consensus 434 ~~Gid~~~g~~~d~~~~gI~dp~~vk~~~l~~A~e~a~~iL~ID~ii~~~ 483 (484)
T cd03342 434 VGGVDLDTGEPMDPESEGIWDNYSVKRQILHSATVIASQLLLVDEIIRAG 483 (484)
T ss_pred ceeeeCCCCcccchhhcCcEEcHHHHHHHHHHHHHHHHHHhhhhHhhhcC
Confidence 79999999999999999999999999999999999999999999999764
No 17
>TIGR02347 chap_CCT_zeta T-complex protein 1, zeta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT zeta chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=6.8e-86 Score=733.38 Aligned_cols=455 Identities=24% Similarity=0.363 Sum_probs=400.6
Q ss_pred HHHHHHHHHHHHHHHHhhhhccCcCCCceeeecCCCCcEEecChHHHhccccccCccchHHHHHHHHHHHhcccccCCCc
Q 007643 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (595)
Q Consensus 72 ~~~~~~~~~~v~~la~~v~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~l~l~hP~enigakLl~~~a~~qd~~~GDGT 151 (595)
.+++..|+.+|..|+++|+|||||+||||||+++.|+++|||||+||+++|+++||+ ++|++++|++||+++||||
T Consensus 15 ~~~~~~ni~a~~~l~~~vkttlGP~G~~Kmi~~~~G~~~ITnDG~TIlk~i~i~hP~----a~ll~~~a~~qd~~~GDGT 90 (531)
T TIGR02347 15 DAALMMNINAARGLQDVLKTNLGPKGTLKMLVSGAGDIKLTKDGNVLLNEMQIQHPT----ASMIARAATAQDDITGDGT 90 (531)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCccceEEEcCCCCEEEeccHHHHHHhccccChH----HHHHHHHHHHhhhhhcCcH
Confidence 779999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHcccccC---Cch-HHHHHHhhhcCC------hhHHHH
Q 007643 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEV---EDS-ELADVAAVSAGN------NYEVGN 221 (595)
Q Consensus 152 Tt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v---~~~-~L~~va~ts~~~------~~~ls~ 221 (595)
||+|||+++||+++.+++++|+||..|++||+.|.+.++++|+++++++ .+. .|.++|+|++++ +++|++
T Consensus 91 TtvvvLa~~Ll~~a~~li~~gihp~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~l~~ia~tsl~sK~~~~~~~~ls~ 170 (531)
T TIGR02347 91 TSTVILIGELLKQAERYILEGIHPRILTEGFEIARGELLEFLDKFKIKTEDEVDRELLLNVARTSLRTKLPIDLADQLTE 170 (531)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHhccccchhhHHHHHH
Confidence 9999999999999999999999999999999999999999999999764 344 799999999865 789999
Q ss_pred HHHHHHHhhccCCc------EE--eeCCCcccceeEEEeeeEEeecccCCccccCcccCcccccCeeEEEecccCC----
Q 007643 222 MIAEAMSKVGRKGV------VT--LEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKIT---- 289 (595)
Q Consensus 222 li~~Av~~v~~~g~------I~--v~~G~~~~ds~~li~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~---- 289 (595)
++++|+..+++++. |. ...|++..|+ ++++|++|+++|.+|+ |+++++||+|+++|+++.
T Consensus 171 iv~~Av~~v~~~~~~i~~~~I~i~k~~g~s~~ds-~~v~Giv~~~~~~~~~-------~~~~~~n~~Ill~~~~le~~~~ 242 (531)
T TIGR02347 171 IVVDAVLAIKKDGEQIDLFMVEIMEMKHKSATDT-TLIRGLVLDHGARHPD-------MPRRVKNAYILTCNVSLEYEKT 242 (531)
T ss_pred HHHHHHHHHhhcCCCCChhHeEEEEecCCCcccc-EEEeeEEEecCcCCCC-------CceeccCceEEEEeCCCCCCcc
Confidence 99999999987643 33 3578999999 9999999999999987 466889999999998753
Q ss_pred ---------CHHH-----------HHHHHHHHHHcCC-------C---EEEEeccccHHHHHHHHHHhhcccceeEEeeC
Q 007643 290 ---------NARD-----------LINVLEDAIRGAY-------P---ILIIAEDIEQEALATLVVNKLRGALKIAALKA 339 (595)
Q Consensus 290 ---------~~~~-----------i~~~le~i~~~g~-------~---lvIi~~~i~~~aL~~L~~n~~~g~~~i~av~~ 339 (595)
++++ +..+++.+.+.+. + ||+++++|++.++++|..+ +|++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~E~~~l~~~v~~I~~~~~~~~~~~~~~~~lvi~~k~I~~~a~~~L~~~------~I~~i~- 315 (531)
T TIGR02347 243 EVNSGFFYSNAEQREKLVEAERKFVDDRVKKIIELKKKVCGKSPDKGFVVINQKGIDPPSLDLLAKE------GIMALR- 315 (531)
T ss_pred ccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCccEEEEeCCCccHHHHHHHHHC------CceEEc-
Confidence 2223 2345677777551 4 8999999999999999886 578776
Q ss_pred CCcccchhhhHHHHHHHhCCeEeecCCCccccCCCCCCceeeeEE---EEecCeEEEEccCCCchhhhhHHHHHHHHHHh
Q 007643 340 PGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKV---VLTKDTTTIVGDGSTQDAVSKRVAQIRTLIEN 416 (595)
Q Consensus 340 ~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v---~i~~~~~~ii~~~~~~~~i~~r~~~lr~~l~~ 416 (595)
++++++|+|||++|||++++ +++++++++||+|++| ++++++|+++.+++++...+. .|| +
T Consensus 316 ----rv~~~~le~ia~~tGa~~i~-----~l~~~~~~~LG~~~~v~~~~ig~~~~~~i~~~~~~~~~TI---~lr----G 379 (531)
T TIGR02347 316 ----RAKRRNMERLTLACGGEALN-----SVEDLTPECLGWAGLVYETSIGEEKYTFIEEVKNPKSCTI---LIK----G 379 (531)
T ss_pred ----cCCHHHHHHHHHHhCCEEec-----ccccCCccccccceEEEEEEECCeEEEEEEcCCCCCeEEE---EEe----C
Confidence 55688999999999999998 6899999999999999 578899999998876544321 243 3
Q ss_pred hchHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHcC-ccccchHHHHHHHHHHHHHhhcCCchhHHHHHHHHHH
Q 007643 417 AEQDYEREKLNERIAKLSGGVAVIQLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKR 495 (595)
Q Consensus 417 ~~~~~~~e~L~ERi~~l~gg~a~i~~~i~Dal~~~k~al~~g-vVpGGGa~e~~ls~~L~~~~~~~~~~~q~~~i~~~a~ 495 (595)
++ +++.++++ |+++||++++++++++| +|||||++|++++.+|++++++.++.+| +++++|++
T Consensus 380 ~t-~~~l~E~e--------------r~l~DAl~v~~~~~~~~~vvpGGGa~E~~ls~~l~~~~~~~~~~~~-~~i~~fa~ 443 (531)
T TIGR02347 380 PN-DHTIKQIK--------------DAVRDGLRAVKNAIEDKCVVPGAGAFEIAAYCHLKEEKKSVKGKAK-LGVEAFAN 443 (531)
T ss_pred CC-HHHHHHHH--------------HHHHHHHHHHHHHhhCCcEEeCCCHHHHHHHHHHHHHhhcCCCHHH-HHHHHHHH
Confidence 33 33333222 79999999999999999 9999999999999999999877767655 89999999
Q ss_pred HHhHHHHHHHHhcCCchHHHHHHhhhcC---CCceeeecCCCccccccccCcccchHHHHHHHHHHHHHHHHHhchhHHh
Q 007643 496 ALCYPLKLIAKNAGVNGSVVSEKVLSSD---NHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVV 572 (595)
Q Consensus 496 AL~~ip~~L~~NaG~d~~~vi~kl~~~~---~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI 572 (595)
||+.||++||+|||+|+.+++.+|+..| +.++|||+.+|++.||++.|||||+.||+++|++|+++|++|||||++|
T Consensus 444 ALe~ip~~La~NaG~d~~~vl~~l~~~~~~~~~~~Gid~~~g~~~d~~~~gV~Dp~~vk~~al~~A~e~a~~iLrID~ii 523 (531)
T TIGR02347 444 ALLVIPKTLAENSGLDAQDTLVKLEDEHDEGGEVVGVDLETGEPIDPEIKGIWDNYRVKKQLIQSATVIASQLLLVDEVM 523 (531)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHccCCceeeeccCCCccchhhccCEEcHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 9999999999999999999999997643 3579999999999999999999999999999999999999999999999
Q ss_pred hccCC
Q 007643 573 VEIKE 577 (595)
Q Consensus 573 ~~~~~ 577 (595)
+.+|.
T Consensus 524 ~~~~~ 528 (531)
T TIGR02347 524 RAGRS 528 (531)
T ss_pred hCccc
Confidence 88665
No 18
>TIGR02340 chap_CCT_alpha T-complex protein 1, alpha subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT alpha chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=1.9e-85 Score=732.40 Aligned_cols=459 Identities=24% Similarity=0.344 Sum_probs=402.3
Q ss_pred HHHHHHHHHHHHHHHHhhhhccCcCCCceeeecCCCCcEEecChHHHhccccccCccchHHHHHHHHHHHhcccccCCCc
Q 007643 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (595)
Q Consensus 72 ~~~~~~~~~~v~~la~~v~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~l~l~hP~enigakLl~~~a~~qd~~~GDGT 151 (595)
+++|+.+++||..|+++|++||||+||+|||++++|+++|||||+||+|+|+++||+ |+|++++|++||+++||||
T Consensus 11 ~~~~~~ni~~~~~l~~~vkttlGP~G~~k~I~~~~g~~~iTnDG~tIlk~i~~~hP~----akll~~~a~~qd~~~GDGT 86 (536)
T TIGR02340 11 QDVRTQNVTAAMAIANIVKTSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPA----AKILVELAQLQDREVGDGT 86 (536)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcCCCcCceEEEcCCCCEEEeccHHHHHHHhcccChH----HHHHHHHHHHHHHHhCCCh
Confidence 789999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHcc-cccCC--ch-HHHHHHhhhcC------ChhHHHH
Q 007643 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQM-SKEVE--DS-ELADVAAVSAG------NNYEVGN 221 (595)
Q Consensus 152 Tt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~-s~~v~--~~-~L~~va~ts~~------~~~~ls~ 221 (595)
||+|||+++||+++.+++++|+||+.|++||+.|.+.++++|+++ +++++ +. +|.++|+|+++ +++.|++
T Consensus 87 Tt~viLa~~Ll~~a~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~~~~~l~~va~tsl~sK~~~~~~~~ls~ 166 (536)
T TIGR02340 87 TSVVIIAAELLKRADELIKRKVHPTSIISGYRLACKEAVKYIKENLSVSVDELGREALINVAKTSMSSKIIGLDSDFFSN 166 (536)
T ss_pred hhHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhccCCCcccHHHHHHHHHHHhccccchhhHHHHHH
Confidence 999999999999999999999999999999999999999999975 88887 44 89999999987 5789999
Q ss_pred HHHHHHHhhc---cCCc---------EEeeCCCcccceeEEEeeeEEeecccCCccccCcccCcccccCeeEEEecccCC
Q 007643 222 MIAEAMSKVG---RKGV---------VTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKIT 289 (595)
Q Consensus 222 li~~Av~~v~---~~g~---------I~v~~G~~~~ds~~li~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~ 289 (595)
++++|+..++ .+|. |...+|++++|+ ++++|++|+++|.+| +|+++++||+|+++++++.
T Consensus 167 l~~~A~~~v~~~~~~g~~~~~~~~I~i~k~~G~s~~~s-~~i~Gi~i~~~~~~~-------~m~~~~~n~kIli~~~~L~ 238 (536)
T TIGR02340 167 IVVDAVLAVKMTNENGETKYPIKAVNILKAHGGSARES-YLVKGYALNCTRASQ-------QMPKRIKKAKIACLDFNLQ 238 (536)
T ss_pred HHHHHHHHHhcccccCccccchHHeEEEEecCCCcccc-EEEEEEEEecccCCC-------CCcceecCCcEEEEecCCC
Confidence 9999999996 2332 233799999888 999999999999886 4788999999999999753
Q ss_pred CH-------------HH-----------HHHHHHHHHHcCCCEEEEeccccHHHHHHHHHHhhcccceeEEeeCCCcccc
Q 007643 290 NA-------------RD-----------LINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGER 345 (595)
Q Consensus 290 ~~-------------~~-----------i~~~le~i~~~g~~lvIi~~~i~~~aL~~L~~n~~~g~~~i~av~~~~~~~~ 345 (595)
.. .+ +.+.++.+++.|++||+++++|++.++++|..+ ++++++ ++
T Consensus 239 ~~~~~~~~~~~~~~~~~le~~~~~E~~~i~~~i~~I~~~g~~lvi~~k~I~~~a~~~L~k~------~I~~i~-----rv 307 (536)
T TIGR02340 239 KQKMALGVQIVVDDPAKLEGIRQREADITKERIKKILKAGANVVLTTGGIDDMCLKYFVEA------GAMGVR-----RC 307 (536)
T ss_pred CCcccCceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEeCCCCcHHHHHHHHHC------CcEEEe-----cC
Confidence 33 22 235677888999999999999999999999887 567776 66
Q ss_pred hhhhHHHHHHHhCCeEeecCCCc-cccCCCCCCceeeeEEE---EecCeEEEEccCCCchhhhhHHHHHHHHHHhhchHH
Q 007643 346 KSQYLDDIAILTGGTVIRDEVGL-ALDKVGKEVLGNASKVV---LTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDY 421 (595)
Q Consensus 346 ~~~~L~~ia~~tGa~ii~~~~~~-~l~~~~~~~lG~~~~v~---i~~~~~~ii~~~~~~~~i~~r~~~lr~~l~~~~~~~ 421 (595)
++++|+|||++|||+++++..++ ..+++++++||+|++|+ +++++|+++.+++++...+. .|| +++ ++
T Consensus 308 ~~~~LerIa~~tGa~ii~~~~~l~~~~~~~~~~LG~~~~v~~~~ig~~~~~~i~~~~~~~~~TI---lir----G~t-~~ 379 (536)
T TIGR02340 308 KKEDLKRIAKATGGTLVSTLADLEGEETFDASYLGFADEVVEERIADDECILIKGTKGRKSASI---ILR----GAN-DF 379 (536)
T ss_pred CHHHHHHHHHHhCCEEecchhhcCccccccccccccCceEEEEEECCeEEEEEEcCCCCCEEEE---EEe----CCc-HH
Confidence 78999999999999999975444 23456678899999998 78999999988876544321 243 333 33
Q ss_pred HHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHcC-ccccchHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhHH
Q 007643 422 EREKLNERIAKLSGGVAVIQLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYP 500 (595)
Q Consensus 422 ~~e~L~ERi~~l~gg~a~i~~~i~Dal~~~k~al~~g-vVpGGGa~e~~ls~~L~~~~~~~~~~~q~~~i~~~a~AL~~i 500 (595)
+.++. +|+++||++++|+++++| ||||||++|++++.+|++++++..+.++ +++++|++||+.|
T Consensus 380 ~l~E~--------------~r~i~DAl~~~~~~~~~~~vVpGGGa~e~~ls~~l~~~~~~~~~~~~-~~~~~fa~AL~~i 444 (536)
T TIGR02340 380 MLDEM--------------ERSLHDALCVVKRTLESNSVVPGGGAVETALSIYLENFATTLGSREQ-LAIAEFAEALLII 444 (536)
T ss_pred HHHHH--------------HHHHHHHHHHHHHHhcCCCEEECCCHHHHHHHHHHHHHhhhCCChhH-HHHHHHHHHHHHH
Confidence 33322 279999999999999999 9999999999999999998776666555 8999999999999
Q ss_pred HHHHHHhcCCchHHHHHHhhhcC-----------CCceeeecCCCccccccccCcccchHHHHHHHHHHHHHHHHHhchh
Q 007643 501 LKLIAKNAGVNGSVVSEKVLSSD-----------NHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSD 569 (595)
Q Consensus 501 p~~L~~NaG~d~~~vi~kl~~~~-----------~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD 569 (595)
|++||+|||+|+.+++.+|++.| +.++|||+.+|++.||++.|||||+.+|+++|+.|+|+|++||+||
T Consensus 445 p~~La~NaG~d~~~~l~~l~~~h~~~~~~~~~~~~~~~Gid~~~g~~~d~~~~gI~Dp~~~k~~~l~~A~e~a~~iL~ID 524 (536)
T TIGR02340 445 PKVLAVNAALDSTELVAKLRAYHAAAQLKPEKKHLKWYGLDLSNGKIRDNKEAGVLEPAVSKVKSLKFATEAAITILRID 524 (536)
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHccCcccccccCceEeEEccCCccccchhccceecHHHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999997522 3479999999999999999999999999999999999999999999
Q ss_pred HHhhccC
Q 007643 570 CVVVEIK 576 (595)
Q Consensus 570 ~iI~~~~ 576 (595)
++|...|
T Consensus 525 ~ii~~~~ 531 (536)
T TIGR02340 525 DLIKLNP 531 (536)
T ss_pred hhhhcCC
Confidence 9998865
No 19
>cd03339 TCP1_epsilon TCP-1 (CTT or eukaryotic type II) chaperonin family, epsilon subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=2.2e-85 Score=730.72 Aligned_cols=456 Identities=24% Similarity=0.343 Sum_probs=401.7
Q ss_pred ccccCCcHHHHHHHHHHHHHHHHhhhhccCcCCCceeeecCCCCcEEecChHHHhccccccCccchHHHHHHHHHHHhcc
Q 007643 65 DLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTN 144 (595)
Q Consensus 65 ~~~f~~~~~~~~~~~~~v~~la~~v~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~l~l~hP~enigakLl~~~a~~qd 144 (595)
+..|| +++++.++.+|..++++|+|||||+||||||+++.|+++|||||+||+++|+++||+ |+|++++|++||
T Consensus 17 ~~~~~--~~~~~~ni~~~~~i~~~v~tslGP~G~~kmi~~~~G~~~iTnDG~tIlk~l~~~hP~----akll~~~a~~q~ 90 (526)
T cd03339 17 KRLKG--LEAHKSHILAAKSVANILRTSLGPRGMDKILVSPDGEVTVTNDGATILEKMDVDHQI----AKLLVELSKSQD 90 (526)
T ss_pred ccccH--HHHHHHHHHHHHHHHHHHhCCCCCCCCcEEEECCCCCEEEeCcHHHHHHHhcccCHH----HHHHHHHHHhhh
Confidence 47788 899999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred cccCCCcchHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHcccccCC----ch-HHHHHHhhhcCC----
Q 007643 145 DLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE----DS-ELADVAAVSAGN---- 215 (595)
Q Consensus 145 ~~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~----~~-~L~~va~ts~~~---- 215 (595)
+++||||||+|+|+++||+++.+++++|+||..|++||+.|.+.++++|++++++++ +. .|.++|+|++++
T Consensus 91 ~~~GDGTtt~viLa~~ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~l~~ia~tsl~sk~~~ 170 (526)
T cd03339 91 DEIGDGTTGVVVLAGALLEQAEKLLDRGIHPIRIADGYEQACKIAVEHLEEIADKIEFSPDNKEPLIQTAMTSLGSKIVS 170 (526)
T ss_pred hhhcCChhhHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccccCCCcccHHHHHHHHHHhhcccchh
Confidence 999999999999999999999999999999999999999999999999999999885 23 799999999875
Q ss_pred --hhHHHHHHHHHHHhhccC-------Cc--EEeeCCCcccceeEEEeeeEEeecccCCccccCcccCcccccCeeEEEe
Q 007643 216 --NYEVGNMIAEAMSKVGRK-------GV--VTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLV 284 (595)
Q Consensus 216 --~~~ls~li~~Av~~v~~~-------g~--I~v~~G~~~~ds~~li~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~ 284 (595)
.+.|++++++|+..+... .. |.+.+|++++|| ++++|++|+++|.+|+| ++.++||+|+++
T Consensus 171 ~~~~~~s~i~v~av~~i~~~~~~~~d~~~I~i~ki~Ggs~~dS-~~v~Givi~~~~~~~~m-------~~~~~n~kI~ll 242 (526)
T cd03339 171 RCHRQFAEIAVDAVLSVADLERKDVNFELIKVEGKVGGRLEDT-KLVKGIVIDKDFSHPQM-------PKEVKDAKIAIL 242 (526)
T ss_pred hHHHHHHHHHHHHHHHHhhcCCCccchHHeEEEEecCcCHHHc-ceeeeEEEecccCCCCC-------CceecCCCEEEE
Confidence 378999999999988531 12 445799999999 99999999999999875 456778999988
Q ss_pred ccc-------------CCCHHH-----------HHHHHHHHHHcCCCEEEEeccccHHHHHHHHHHhhcccceeEEeeCC
Q 007643 285 DKK-------------ITNARD-----------LINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAP 340 (595)
Q Consensus 285 d~~-------------i~~~~~-----------i~~~le~i~~~g~~lvIi~~~i~~~aL~~L~~n~~~g~~~i~av~~~ 340 (595)
+++ ++++++ +.++++.+.+.|+||||++++|++.++++|..| ++.||++
T Consensus 243 ~~~le~~~~~~~~~~~i~s~~~~~~~~~~E~~~i~~~v~~i~~~g~~lvi~~~~I~~~al~~L~~~------~I~av~~- 315 (526)
T cd03339 243 TCPFEPPKPKTKHKLDITSVEDYKKLQEYEQKYFREMVEQVKDAGANLVICQWGFDDEANHLLLQN------GLPAVRW- 315 (526)
T ss_pred EecccCCccccceEEEeCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEeCCCCCHHHHHHHHHC------CCEEEEe-
Confidence 764 566655 567789999999999999999999999999887 4568875
Q ss_pred CcccchhhhHHHHHHHhCCeEeecCCCccccCCCCCCceeeeEEE---Ee--cCeEEEEccCCCchhhhhHHHHHHHHHH
Q 007643 341 GFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVV---LT--KDTTTIVGDGSTQDAVSKRVAQIRTLIE 415 (595)
Q Consensus 341 ~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~---i~--~~~~~ii~~~~~~~~i~~r~~~lr~~l~ 415 (595)
+++++|+|||++|||++++ ++++++++.||+|+.|+ ++ ++.++++.+|+++...+. .||
T Consensus 316 ----v~~~~LerIa~~tGa~ii~-----~l~~l~~~~LG~~~~v~~~~ig~~~~~~~~i~g~~~~~~~TI---llr---- 379 (526)
T cd03339 316 ----VGGVEIELIAIATGGRIVP-----RFEDLSPEKLGKAGLVREISFGTTKDKMLVIEGCPNSKAVTI---FIR---- 379 (526)
T ss_pred ----CCHHHHHHHHHHhCCEEec-----chhhCChhhcccCceEEEEEecCCCcEEEEEECCCCCCEEEE---EEE----
Confidence 4567899999999999998 68899999999999987 33 468888988876654321 243
Q ss_pred hhchHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHcC-ccccchHHHHHHHHHHHHHhhcCCchhHHHHHHHHH
Q 007643 416 NAEQDYEREKLNERIAKLSGGVAVIQLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVK 494 (595)
Q Consensus 416 ~~~~~~~~e~L~ERi~~l~gg~a~i~~~i~Dal~~~k~al~~g-vVpGGGa~e~~ls~~L~~~~~~~~~~~q~~~i~~~a 494 (595)
+++ +++.++. +|+++||++++++++++| +|||||++||+++++|++++++..+.+ ++++++|+
T Consensus 380 G~t-~~~l~E~--------------er~l~DAl~~~~~~~~~~~vvpGGGa~e~~ls~~l~~~~~~~~~~~-~~~~~~~a 443 (526)
T cd03339 380 GGN-KMIIEEA--------------KRSLHDALCVVRNLIRDNRIVYGGGAAEISCSLAVEKAADKCSGIE-QYAMRAFA 443 (526)
T ss_pred CCC-HHHHHHH--------------HHHHHHHHHHHHHHhhCCCEEeCCCHHHHHHHHHHHHHhccCCCHH-HHHHHHHH
Confidence 333 3333322 279999999999999998 999999999999999999987777765 48999999
Q ss_pred HHHhHHHHHHHHhcCCchHHHHHHhhhc----CCCceeeecCCCccccccccCcccchHHHHHHHHHHHHHHHHHhchhH
Q 007643 495 RALCYPLKLIAKNAGVNGSVVSEKVLSS----DNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDC 570 (595)
Q Consensus 495 ~AL~~ip~~L~~NaG~d~~~vi~kl~~~----~~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~ 570 (595)
+||+.||++|++|||+|+.+++.+|+.. ++.++|||+.+|++.||++.|||||+.||+++|+.|+|+|++|||||+
T Consensus 444 ~aL~~ip~~L~~NaG~d~~~~l~~l~~~h~~~~~~~~Gid~~~g~~~d~~~~gV~dp~~vk~~~l~~A~e~a~~iL~iD~ 523 (526)
T cd03339 444 DALESIPLALAENSGLNPIETLSEVKARQVKEKNPHLGIDCLGRGTNDMKEQKVFETLISKKQQILLATQVVKMILKIDD 523 (526)
T ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcCCCeEeeecCCCccCchhhcCceecHHHHHHHHHHHHHHHHHHhhhce
Confidence 9999999999999999999999999743 245799999999999999999999999999999999999999999999
Q ss_pred Hhh
Q 007643 571 VVV 573 (595)
Q Consensus 571 iI~ 573 (595)
+|.
T Consensus 524 ii~ 526 (526)
T cd03339 524 VIV 526 (526)
T ss_pred ecC
Confidence 874
No 20
>COG0459 GroL Chaperonin GroEL (HSP60 family) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=6.8e-87 Score=733.20 Aligned_cols=487 Identities=45% Similarity=0.656 Sum_probs=413.3
Q ss_pred cccccccCCcHHHHHHHHHHHHHHHHhhhhccCcCCCceeeecCCCCcEEecChHHHhccccccCccchHHHHHHHHHHH
Q 007643 62 AAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAA 141 (595)
Q Consensus 62 ~~k~~~f~~~~~~~~~~~~~v~~la~~v~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~l~l~hP~enigakLl~~~a~ 141 (595)
++++..|+ +++|..++.|++.|+++|++||||+||||||+++.|+|+|||||+||+|+|+++||. |||++++|+
T Consensus 2 ~~~~~~~~--~~a~~~~~~~~~~la~~vkttLGPkG~~k~l~~~~g~~~iTnDG~tIlkeielehp~----akll~eva~ 75 (524)
T COG0459 2 MGKERKFG--EDARRSNIRAARALADAVKTTLGPKGRNKMLVDSGGDITITNDGVTILKEIELEHPG----AKLLVEVAK 75 (524)
T ss_pred Cccccccc--HHHHHHHHHHHHHHHHHHHhccCCCcCceEEecCCCCEEEecCcceehhhhhccCch----hHHHHHHHH
Confidence 47889999 999999999999999999999999999999999977999999999999999999997 999999999
Q ss_pred hcccccCCCcchHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHcccccCCch--HHHHHHhhh-----cC
Q 007643 142 KTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS--ELADVAAVS-----AG 214 (595)
Q Consensus 142 ~qd~~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~--~L~~va~ts-----~~ 214 (595)
+||+++||||||+|||+++||+++.+++++|+||+.|++||++|.+.++++|+++++++++. +. +++.|+ .+
T Consensus 76 ~qd~e~GDGTTtavVLa~all~ea~~li~~gi~P~~I~~G~~~A~~~~~e~l~~~a~~v~~~~~~~-~~~~t~v~sk~~~ 154 (524)
T COG0459 76 KQDDEAGDGTTTAVVLAGALLKEAEKLIAAGIHPTVIKRGYRLAVEKAVEELKEIAKPVSDSEEEL-KIAITSVASKSAN 154 (524)
T ss_pred HHHHHhcCchHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhccCCcchhhh-hhhhheeeeeecc
Confidence 99999999999999999999999999999999999999999999999999999999998865 22 444443 45
Q ss_pred ChhHHHHHHHHHHHhhcc-----CCcEEee-CCCcccceeEEEeeeEEeecccCCccccCcccCcccccCeeEEEecccC
Q 007643 215 NNYEVGNMIAEAMSKVGR-----KGVVTLE-EGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKI 288 (595)
Q Consensus 215 ~~~~ls~li~~Av~~v~~-----~g~I~v~-~G~~~~ds~~li~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~i 288 (595)
++++|++++++|+.+++. ++++.++ .|++..|+ ++++||+|++||.+|||.++ +.++||+|+++|++|
T Consensus 155 ~~~~i~~lv~~Av~~v~~~~~d~~~i~~vk~~gg~~~e~-~vveG~~~dkg~~s~~~~~~-----~~~e~~~Ili~d~~l 228 (524)
T COG0459 155 SDEEIGELVVEAVEKVGKEQSDLDGIIIVKESGGSETEL-EVVEGMVFDKGYLSPYFMPD-----KRLENPKILLLDKKL 228 (524)
T ss_pred ChHHHHHHHHHHHHHhcccccccCCeEEEEecCCCccce-EEEeeEEecCCccCCCCCCc-----cccccceEEEEcccc
Confidence 568999999999999998 7776664 66666666 99999999999999997432 688999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEeccccHHHHHHHHHHhhcccceeEEeeCCCcccchhhhHHHHHHHhCCeEeecCCCc
Q 007643 289 TNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGL 368 (595)
Q Consensus 289 ~~~~~i~~~le~i~~~g~~lvIi~~~i~~~aL~~L~~n~~~g~~~i~av~~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~ 368 (595)
+..++.++ ++...+.+.|++++++++++++|..++.|.+++.+++++|+.|+|+|.++++|+|++++|+.++.+++.+.
T Consensus 229 ~~~k~~l~-~e~~i~~~~~l~~i~e~ee~e~l~~~v~ni~~~g~~~vvv~~~gi~D~~~~~L~d~~Ilt~~~v~~~dl~~ 307 (524)
T COG0459 229 EIKKPELP-LEIVISSGKPLLIIAEDEEGEALATLVVNILRGGANVVVVKAPGIDDLAKAYLEDIAILTGRRVKKEDLGE 307 (524)
T ss_pred ccccccCc-ceeEecCccHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECCCCcHHHHHHHHhhcceecceecchhhHH
Confidence 99888887 77777888888888888888888999999998888888899999999999998888888888888876531
Q ss_pred cccCCCCCCceeeeEEEEecCeEEEEccCCCchhhhhHHHHHHHHHHhh-chHHHHHHHHHHHHHhcCcHHHHH------
Q 007643 369 ALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENA-EQDYEREKLNERIAKLSGGVAVIQ------ 441 (595)
Q Consensus 369 ~l~~~~~~~lG~~~~v~i~~~~~~ii~~~~~~~~i~~r~~~lr~~l~~~-~~~~~~e~L~ERi~~l~gg~a~i~------ 441 (595)
....+|.|..+...++.++...|.+.... +++. .++|+.+++++|.++ .|++++|+
T Consensus 308 -----~l~~~~ga~~v~~~~d~t~~~~G~~~~~~-----------ve~~~~~~~~~~~~~~~~~~-~~~~~tI~vrgate 370 (524)
T COG0459 308 -----RLAKLGGAKIVSVLKDLTTIVLGEGAAGL-----------VEETKTGDYDMEKLQERKAK-AGGVATILVRGATE 370 (524)
T ss_pred -----HHHHccCceEEeecccCceeecCccccce-----------EEEeeccchhhhhhhhhhhc-CCCeEEEEECCccH
Confidence 23445555555555555544444210111 1121 344555555555555 44443332
Q ss_pred -------HHHHHHHHHHHHHHHcC-ccccchHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhHHHHHHHHhcCCchH
Q 007643 442 -------LRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGS 513 (595)
Q Consensus 442 -------~~i~Dal~~~k~al~~g-vVpGGGa~e~~ls~~L~~~~~~~~~~~q~~~i~~~a~AL~~ip~~L~~NaG~d~~ 513 (595)
|+++|||+++|+++++| +|||||++|++++..|++++.+.++.++++++++|++||+.||++|++|||+|+.
T Consensus 371 ~~ldE~er~i~DAL~~~~~ave~g~iV~GGGa~e~~~a~~L~~~~~~~~g~~e~~~i~~~a~Ale~ip~~La~NaG~d~~ 450 (524)
T COG0459 371 VELDEKERRIEDALNVVRAAVEEGKIVPGGGAAEIEAALRLREYAMTVEGGDEQLGIEAFARALEAPPRQLAENAGLDPI 450 (524)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCeEeCCCHHHHHHHHHHHhhhccCCchHHHHHHHHHHHHHHHHHHHHHHhCCCCHH
Confidence 89999999999999999 9999999999999999998433434356699999999999999999999999999
Q ss_pred HHHHHhhhcCC-CceeeecCCCcc-ccccccCcccchHHHHHHHHHHHHHHHHHhchhHHhhccCCCC
Q 007643 514 VVSEKVLSSDN-HKYGYNAATGNY-EDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPE 579 (595)
Q Consensus 514 ~vi~kl~~~~~-~~~Gid~~~g~i-~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~~~~ 579 (595)
+++.+|++.+. +++|||+.++++ .||++.|||||+.||+++|++|+++|.+|||+|++|...|++.
T Consensus 451 ~v~~~L~~~~~~~~~G~d~~~~~~~~dm~~~GI~dP~~v~~~al~~A~e~a~llL~~d~iI~~~~~~~ 518 (524)
T COG0459 451 EVLSKLRSAHATTNYGIDAFTGEYEDDMIEAGIIDPLKVKRSALKNAAEAAGLLLTIDDIIAAKPEEK 518 (524)
T ss_pred HHHHHHHhcccCCccceeccCCccccchHhccCcChHHHHHHHHHHHHHHHHHHHHHHHhhccCCccc
Confidence 99999998765 569999999999 7799999999999999999999999999999999999988754
No 21
>cd03340 TCP1_eta TCP-1 (CTT or eukaryotic type II) chaperonin family, eta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=6.8e-85 Score=726.57 Aligned_cols=456 Identities=21% Similarity=0.333 Sum_probs=404.8
Q ss_pred HHHHHHHHHHHHHHHHhhhhccCcCCCceeeecCCCCcEEecChHHHhccccccCccchHHHHHHHHHHHhcccccCCCc
Q 007643 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (595)
Q Consensus 72 ~~~~~~~~~~v~~la~~v~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~l~l~hP~enigakLl~~~a~~qd~~~GDGT 151 (595)
.+++..++.+|..++++|++||||+||+|||+++.|+++|||||+||+++|+++||+ |+|++++|++||+++||||
T Consensus 15 ~~~~~~ni~a~~~i~~~v~tslGP~G~~kmi~~~~g~~~iTnDG~tIlk~l~~~hP~----akll~~~a~~q~~~~GDGT 90 (522)
T cd03340 15 KGQLISNINACQAIADAVRTTLGPRGMDKLIVDGRGKVTISNDGATILKLLDIVHPA----AKTLVDIAKSQDAEVGDGT 90 (522)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCcCceEEEcCCCCEEEeccHHHHHHHccccCHH----HHHHHHHHHHhHhHhCCCh
Confidence 678999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHcccccCCc------h-HHHHHHhhhcC------ChhH
Q 007643 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED------S-ELADVAAVSAG------NNYE 218 (595)
Q Consensus 152 Tt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~~------~-~L~~va~ts~~------~~~~ 218 (595)
||+|+|+++||+++.+++++|+||..|++||+.|.+.++++|+++++++++ . .|.++|+|+++ ++++
T Consensus 91 tt~viL~~~ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~~l~~ia~t~l~sK~~~~~~~~ 170 (522)
T cd03340 91 TSVVVLAGEFLKEAKPFIEDGVHPQIIIRGYRKALQLAIEKIKEIAVNIDKEDKEEQRELLEKCAATALNSKLIASEKEF 170 (522)
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhcccCcccccccHHHHHHHHHHHhccCcchhHHHH
Confidence 999999999999999999999999999999999999999999999998764 3 69999999976 4689
Q ss_pred HHHHHHHHHHhhccCC---c--EEeeCCCcccceeEEEeeeEEeecccCCccccCcccCcccccCeeEEEeccc------
Q 007643 219 VGNMIAEAMSKVGRKG---V--VTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKK------ 287 (595)
Q Consensus 219 ls~li~~Av~~v~~~g---~--I~v~~G~~~~ds~~li~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~------ 287 (595)
|++++++|+.++++++ . |...+|++++|| ++++|++|+++|.+|+|. +|++.++||+|++++++
T Consensus 171 l~~l~~~A~~~v~~~~~~~~I~i~~i~Ggs~~ds-~lv~Giv~~k~~~~~~~~----~~~~~~~n~kIll~~~~Le~~~~ 245 (522)
T cd03340 171 FAKMVVDAVLSLDDDLDLDMIGIKKVPGGSLEDS-QLVNGVAFKKTFSYAGFE----QQPKKFKNPKILLLNVELELKAE 245 (522)
T ss_pred HHHHHHHHHHHhcccCChhHheEeeecCCChhhc-eeeeeEEEecccCccccc----cCCccccCCeEEEEeCCCCCCcc
Confidence 9999999999998765 2 334599999999 899999999999999864 35677999999999987
Q ss_pred -------CCCHHH-----------HHHHHHHHHHcCCCEEEEeccccHHHHHHHHHHhhcccceeEEeeCCCcccchhhh
Q 007643 288 -------ITNARD-----------LINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQY 349 (595)
Q Consensus 288 -------i~~~~~-----------i~~~le~i~~~g~~lvIi~~~i~~~aL~~L~~n~~~g~~~i~av~~~~~~~~~~~~ 349 (595)
++++++ +.+.++.+.+.|+++|+++++|++.++++|..+ +|++++ ++++++
T Consensus 246 ~~~~~i~i~~~~~~~~~~~~E~~~l~~~v~~i~~~g~~vvl~~~~i~d~a~~~l~~~------~I~~~~-----~v~~~~ 314 (522)
T cd03340 246 KDNAEVRVEDPEEYQAIVDAEWKIIYDKLEKIVKSGANVVLSKLPIGDLATQYFADR------DIFCAG-----RVPEED 314 (522)
T ss_pred ccceEEEECCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCcHHHHHHHHHC------CcEEEE-----eCCHHH
Confidence 455544 455678889999999999999999999999887 456665 667899
Q ss_pred HHHHHHHhCCeEeecCCCccccCCCCCCceeeeEEE---EecCeEEEEccCCCchhhhhHHHHHHHHHHhhchHHHHHHH
Q 007643 350 LDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVV---LTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKL 426 (595)
Q Consensus 350 L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~---i~~~~~~ii~~~~~~~~i~~r~~~lr~~l~~~~~~~~~e~L 426 (595)
|+|||++|||++++ +++++++++||+|+.|+ +++++++++.+|..+...+ .+||| ++... .+
T Consensus 315 l~rIa~~tGa~ii~-----~l~~l~~~~LG~~~~v~~~~ig~~~~~~~~~~~~~~~~T---IllrG----~t~~~-l~-- 379 (522)
T cd03340 315 LKRVAQATGGSIQT-----TVSNITDDVLGTCGLFEERQVGGERYNIFTGCPKAKTCT---IILRG----GAEQF-IE-- 379 (522)
T ss_pred HHHHHHHHCCEEee-----ccccCCccccccceEEEEEEECCEEEEEEECCCCCceEE---EEEEC----CCHHH-HH--
Confidence 99999999999998 58889999999999998 6788999999887644322 13443 33332 22
Q ss_pred HHHHHHhcCcHHHHHHHHHHHHHHHHHHHHcC-ccccchHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhHHHHHHH
Q 007643 427 NERIAKLSGGVAVIQLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIA 505 (595)
Q Consensus 427 ~ERi~~l~gg~a~i~~~i~Dal~~~k~al~~g-vVpGGGa~e~~ls~~L~~~~~~~~~~~q~~~i~~~a~AL~~ip~~L~ 505 (595)
| ++|+++||++++++++++| ||||||++|++++.+|++++++..+.++ +++++|++||+.||++|+
T Consensus 380 -E-----------~er~i~Dal~~~~~~i~~~~vvpGGG~~E~~ls~~l~~~~~~~~~~~~-~~~~~fa~aL~~ip~~La 446 (522)
T cd03340 380 -E-----------AERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIAGKQQ-LVINAFAKALEIIPRQLC 446 (522)
T ss_pred -H-----------HHHHHHHHHHHHHHHhcCCCEEECcCHHHHHHHHHHHHHhccCCCHHH-HHHHHHHHHHHHHHHHHH
Confidence 2 1279999999999999998 9999999999999999998877666655 899999999999999999
Q ss_pred HhcCCchHHHHHHhhhcC---C-CceeeecCCCccccccccCcccchHHHHHHHHHHHHHHHHHhchhHHhhcc
Q 007643 506 KNAGVNGSVVSEKVLSSD---N-HKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEI 575 (595)
Q Consensus 506 ~NaG~d~~~vi~kl~~~~---~-~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~~~ 575 (595)
+|||+|+.+++.+|++.| + .++|||+.+|++.||++.|||||+.||+++|+.|+|+|++||+||++|+.+
T Consensus 447 ~NaG~d~~~~l~~l~~~h~~~~~~~~Gid~~~g~i~d~~~~gV~dp~~vk~~~i~~A~e~a~~iL~id~ii~~~ 520 (522)
T cd03340 447 DNAGFDATDILNKLRQKHAQGGGKWYGVDINNEGIADNFEAFVWEPSLVKINALTAATEAACLILSVDETIKNP 520 (522)
T ss_pred HhCCCCHHHHHHHHHHHHHccCCCeeeeeCCCCcccchhhcCceEcHHHHHHHHHHHHHHHHHHhhhhhheeCC
Confidence 999999999999998642 3 579999999999999999999999999999999999999999999999774
No 22
>cd03338 TCP1_delta TCP-1 (CTT or eukaryotic type II) chaperonin family, delta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=4.2e-85 Score=727.48 Aligned_cols=458 Identities=21% Similarity=0.311 Sum_probs=400.5
Q ss_pred HHHHHHHHHHHHHHHHhhhhccCcCCCceeeecCCCCcEEecChHHHhccccccCccchHHHHHHHHHHHhcccccCCCc
Q 007643 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (595)
Q Consensus 72 ~~~~~~~~~~v~~la~~v~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~l~l~hP~enigakLl~~~a~~qd~~~GDGT 151 (595)
.++++.|+.+|..++++|++||||+||||||++++|+++|||||+||+++|+++||+ ++|++++|++||+++||||
T Consensus 7 ~~~~~~ni~a~~~i~~~v~ttlGP~G~~k~i~~~~g~~~iTnDG~tIlk~l~~~hp~----a~ll~~~a~~q~~~~GDGT 82 (515)
T cd03338 7 ADVRLSNIQAAKAVADAIRTSLGPRGMDKMIQTGKGEVIITNDGATILKQMSVLHPA----AKMLVELSKAQDIEAGDGT 82 (515)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCCCeeeeCCCCCEEEECcHHHHHHhCcCcCHH----HHHHHHHHHHHHhHhcCCc
Confidence 568899999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHcccccCC--ch-HHHHHHhhhcC------ChhHHHHH
Q 007643 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE--DS-ELADVAAVSAG------NNYEVGNM 222 (595)
Q Consensus 152 Tt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~--~~-~L~~va~ts~~------~~~~ls~l 222 (595)
||+|+|+++||+++.+++++|+||..|++||+.|.+.++++|++++++++ +. +|.++|+||++ ++++|+++
T Consensus 83 tt~vvLa~~ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~a~~v~~~~~~~l~~va~ts~~sK~~~~~~~~ls~l 162 (515)
T cd03338 83 TSVVVLAGALLSACESLLKKGIHPTVISESFQIAAKKAVEILDSMSIPVDLNDRESLIKSATTSLNSKVVSQYSSLLAPI 162 (515)
T ss_pred chHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHhccccchhhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999986 44 89999999998 46889999
Q ss_pred HHHHHHhhccCCc----------EEeeCCCcccceeEEEeeeEEeecccCCccccCcccCcccccCeeEEEecccC----
Q 007643 223 IAEAMSKVGRKGV----------VTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKI---- 288 (595)
Q Consensus 223 i~~Av~~v~~~g~----------I~v~~G~~~~ds~~li~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~i---- 288 (595)
+++|+.++++++. |.++.|++++|+ ++++|++|+++|.+|++ ||+.++||+++++++++
T Consensus 163 i~~A~~~v~~~~~~~~~d~~~i~i~~~~Ggs~~ds-~lv~Giv~~k~~~~~~~------~p~~i~n~ki~ll~~~le~~~ 235 (515)
T cd03338 163 AVDAVLKVIDPATATNVDLKDIRIVKKLGGTIEDT-ELVDGLVFTQKASKKAG------GPTRIEKAKIGLIQFCLSPPK 235 (515)
T ss_pred HHHHHHHhhcccccCcCCHHHeEEEEecCCChhhc-eeeeeEEEeccccCcCC------CCccccCCcEEEEeccccccc
Confidence 9999999988653 566799999999 99999999999999752 35667889998887653
Q ss_pred ---------CCH-----------HHHHHHHHHHHHcCCCEEEEeccccHHHHHHHHHHhhcccceeEEeeCCCcccchhh
Q 007643 289 ---------TNA-----------RDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQ 348 (595)
Q Consensus 289 ---------~~~-----------~~i~~~le~i~~~g~~lvIi~~~i~~~aL~~L~~n~~~g~~~i~av~~~~~~~~~~~ 348 (595)
+++ +++.++++.+++.|+||||++++|++++++.++.|.+++ .+|+||+ +++++
T Consensus 236 ~~~~~~~~i~~~~~~~~~~~~E~~~i~~~v~~i~~~g~~lvi~~~~i~~~~v~~l~~~~l~~-~~I~av~-----~~~~~ 309 (515)
T cd03338 236 TDMDNNIVVNDYAQMDRILREERKYILNMCKKIKKSGCNVLLIQKSILRDAVSDLALHFLAK-LKIMVVK-----DIERE 309 (515)
T ss_pred cccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCcccccccHHHHHHHHH-CCceEEe-----cCCHH
Confidence 333 345677899999999999999999655555555555544 4889987 77899
Q ss_pred hHHHHHHHhCCeEeecCCCccccCCCCCCceeeeEEEE---ecCeEEEEccCCC-chhhhhHHHHHHHHHHhhchHHHHH
Q 007643 349 YLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL---TKDTTTIVGDGST-QDAVSKRVAQIRTLIENAEQDYERE 424 (595)
Q Consensus 349 ~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i---~~~~~~ii~~~~~-~~~i~~r~~~lr~~l~~~~~~~~~e 424 (595)
+|+|||++|||++++ +++++++++||+|+.|++ +++.++++.++.+ ....+ ..||| ++ +++.+
T Consensus 310 ~LerIa~~tGa~ii~-----sl~~l~~~~LG~~~~v~~~~~g~~~~~~i~~~~~~~~~~T---IllrG----~t-~~~l~ 376 (515)
T cd03338 310 EIEFICKTIGCKPVA-----SIDHFTEDKLGSADLVEEVSLGDGKIVKITGVKNPGKTVT---ILVRG----SN-KLVLD 376 (515)
T ss_pred HHHHHHHHHCCEEec-----ccccCCHhhCCCCceEEEEEECCeEEEEEEecCCCCceEE---EEEeC----Cc-HHHHH
Confidence 999999999999999 688898999999999985 4668888888765 23221 12433 33 33333
Q ss_pred HHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHcC-ccccchHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhHHHHH
Q 007643 425 KLNERIAKLSGGVAVIQLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKL 503 (595)
Q Consensus 425 ~L~ERi~~l~gg~a~i~~~i~Dal~~~k~al~~g-vVpGGGa~e~~ls~~L~~~~~~~~~~~q~~~i~~~a~AL~~ip~~ 503 (595)
+++ |+++||++++++++++| +|||||++|++++++|++++++.++.+| +++++|++||+.||++
T Consensus 377 e~~--------------r~i~Dal~~~~~~~~~~~vvpGGG~~e~~ls~~l~~~~~~~~~~~~-~~~~~~a~al~~ip~~ 441 (515)
T cd03338 377 EAE--------------RSLHDALCVIRCLVKKRALIPGGGAPEIEIALQLSEWARTLTGVEQ-YCVRAFADALEVIPYT 441 (515)
T ss_pred HHH--------------HHHHHHHHHHHHHhhCCCEEECCCHHHHHHHHHHHHHhccCCcHHH-HHHHHHHHHHHHHHHH
Confidence 222 79999999999999999 9999999999999999998876666555 8999999999999999
Q ss_pred HHHhcCCchHHHHHHhhhc---CCCceeeecCCCccccccccCcccchHHHHHHHHHHHHHHHHHhchhHHhhc
Q 007643 504 IAKNAGVNGSVVSEKVLSS---DNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVE 574 (595)
Q Consensus 504 L~~NaG~d~~~vi~kl~~~---~~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~~ 574 (595)
|++|||+|+.+++.+|+.. ++.++|||+.+|++.||++.|||||+.||+++|+.|+++|++||+||++|+.
T Consensus 442 L~~NaG~d~~~~~~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~~l~~A~~~a~~iL~ID~ii~~ 515 (515)
T cd03338 442 LAENAGLNPISIVTELRNRHAQGEKNAGINVRKGAITNILEENVVQPLLVSTSAITLATETVRMILKIDDIVLA 515 (515)
T ss_pred HHHHCCCCHHHHHHHHHHHHHccCCccceeccCCCccchhhcCceecHHHHHHHHHHHHHHHHHHhccchhhcC
Confidence 9999999999999999763 3568999999999999999999999999999999999999999999999863
No 23
>KOG0361 consensus Chaperonin complex component, TCP-1 eta subunit (CCT7) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.1e-86 Score=669.58 Aligned_cols=462 Identities=20% Similarity=0.313 Sum_probs=414.2
Q ss_pred HHHHHHHHHHHHHHHHhhhhccCcCCCceeeecCCCCcEEecChHHHhccccccCccchHHHHHHHHHHHhcccccCCCc
Q 007643 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (595)
Q Consensus 72 ~~~~~~~~~~v~~la~~v~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~l~l~hP~enigakLl~~~a~~qd~~~GDGT 151 (595)
.-..-+|+++|..+++.++|||||+||||+|++..|+.+|+|||+||+|.|++-||+ |+.++++|++||.|+||||
T Consensus 19 k~QlvSNInaC~~v~e~~rtTLGP~GmDkLivd~~g~~tIsNDGATIlKlldivhPa----aktlVdia~sQDaEVGDGT 94 (543)
T KOG0361|consen 19 KGQLVSNINACTAVAEALRTTLGPRGMDKLIVDSKGKTTISNDGATILKLLDIVHPA----AKTLVDIARSQDAEVGDGT 94 (543)
T ss_pred chhhhhchHHHHHHHHHHHhccCccccceeeecCCCcEEEecCcHHHHHHHhhcChh----HHHHHHHHhhccccccCCc
Confidence 345568899999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHcccccCCc--h-----HHHHHHhhhcC------ChhH
Q 007643 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED--S-----ELADVAAVSAG------NNYE 218 (595)
Q Consensus 152 Tt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~~--~-----~L~~va~ts~~------~~~~ 218 (595)
||||+|++|+|+++..+++.|+||..|+++|++|...+++.|+++++.++. . .|++.|.|+++ ++++
T Consensus 95 TSVv~la~E~lk~~Kpfiedgv~~~~iir~~rka~~l~v~ki~elav~i~~~~~~~~r~lL~KcA~T~lsSKlI~~ek~f 174 (543)
T KOG0361|consen 95 TSVVLLAAEFLKEAKPFIEDGVHPQLIIRAYRKARQLAVEKIKELAVEIDGSSKTELRELLEKCAATALSSKLIRQEKEF 174 (543)
T ss_pred eeEeeeHHHHHHhhhhHhhcCCCHHHHHHHHHHHHHHHHHHHHHheeEecccchhhHHHHHHHHHHHHhhhhhhhhhHHH
Confidence 999999999999999999999999999999999999999999999988872 1 57888988864 4699
Q ss_pred HHHHHHHHHHhhccCC---c--EEeeCCCcccceeEEEeeeEEeecccCCccccCcccCcccccCeeEEEeccc------
Q 007643 219 VGNMIAEAMSKVGRKG---V--VTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKK------ 287 (595)
Q Consensus 219 ls~li~~Av~~v~~~g---~--I~v~~G~~~~ds~~li~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~------ 287 (595)
|++|++||+..++.+. . |++.+|++++|| .+++|+.|++.|....| +.+|+++.||||+++|.+
T Consensus 175 F~~MvVDAV~~ld~~l~~~mIGIKKV~GG~~~dS-~lv~GVAFkKtFsYAGf----EqqPKk~~NpkIl~LnvELElKaE 249 (543)
T KOG0361|consen 175 FAKMVVDAVLTLDNDLDLNMIGIKKVPGGAMEDS-LLVNGVAFKKTFSYAGF----EQQPKKFLNPKILLLNVELELKAE 249 (543)
T ss_pred HHHHHHHHHHhhccccchhhcceeecCCCccchh-hhccceeeeehccccch----hhCccccCCceEEEEeeeeeeccc
Confidence 9999999999997432 1 677899999999 79999999999988776 457889999999999864
Q ss_pred -------CCCHHHHH-----------HHHHHHHHcCCCEEEEeccccHHHHHHHHHHhhcccceeEEeeCCCcccchhhh
Q 007643 288 -------ITNARDLI-----------NVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQY 349 (595)
Q Consensus 288 -------i~~~~~i~-----------~~le~i~~~g~~lvIi~~~i~~~aL~~L~~n~~~g~~~i~av~~~~~~~~~~~~ 349 (595)
+.++++++ ..|+++..+|.++|+..-.|.|.|.++|+.+.+ .+.|+++.++
T Consensus 250 kdNAEiRv~~v~eyQ~iVDAEW~Ii~~KL~ki~~sGAnVVLSkLpIGD~ATQyFAdrdi-----------FCAGRV~~eD 318 (543)
T KOG0361|consen 250 KDNAEIRVDNVEEYQAIVDAEWNIIYDKLDKIHESGANVVLSKLPIGDLATQYFADRDI-----------FCAGRVPEED 318 (543)
T ss_pred ccCceeecCCHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEecccchHHHHHHhhccCc-----------eecCcCCHHH
Confidence 55666654 457899999999999999999999999987632 4668999999
Q ss_pred HHHHHHHhCCeEeecCCCccccCCCCCCceeeeEEE---EecCeEEEEccCCCchhhhhHHHHHHHHHHhhchHHHHHHH
Q 007643 350 LDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVV---LTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKL 426 (595)
Q Consensus 350 L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~---i~~~~~~ii~~~~~~~~i~~r~~~lr~~l~~~~~~~~~e~L 426 (595)
|.|+..+|||++.+ +..++.++.||.|+.|+ +++++|.+|.+|+.....+. +|||+ .++|..|.
T Consensus 319 l~Rv~~acGGsi~t-----t~~~i~~~~LG~C~~FeE~QvG~eRyN~Fegcp~aktcTl---iLRGg----aeqfieE~- 385 (543)
T KOG0361|consen 319 LNRVMQACGGSIQT-----TVSDIKEEVLGTCALFEERQVGGERYNLFEGCPKAKTCTL---ILRGG----AEQFIEET- 385 (543)
T ss_pred HHHHHHhcCcchhh-----hhhhcchhhcchhhhHHHHhhcchhhhhhcCCCccceeEE---EEecc----HHHHHHHH-
Confidence 99999999999998 68889999999999996 78999999999998765432 46654 33443331
Q ss_pred HHHHHHhcCcHHHHHHHHHHHHHHHHHHHHcC-ccccchHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhHHHHHHH
Q 007643 427 NERIAKLSGGVAVIQLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIA 505 (595)
Q Consensus 427 ~ERi~~l~gg~a~i~~~i~Dal~~~k~al~~g-vVpGGGa~e~~ls~~L~~~~~~~~~~~q~~~i~~~a~AL~~ip~~L~ 505 (595)
| |++|||++++|.|+++. ||+|||++||++|++|++++.++.+++| +.+.+|++|||.||++||
T Consensus 386 -e-------------RSlHDAImIVrralkn~~vVaGGGaiEMElSk~lRd~S~ti~gK~q-~~i~A~akalEvIPrqLc 450 (543)
T KOG0361|consen 386 -E-------------RSLHDAIMIVRRALKNDSVVAGGGAIEMELSKYLRDYSRTIAGKQQ-LFINAYAKALEVIPRQLC 450 (543)
T ss_pred -h-------------hhhhhHHHHHHHHhccCcEeeCCceeeehHHHHHHHhhcccCcHHH-HHHHHHHHHHHHhHHHHh
Confidence 3 89999999999999998 9999999999999999999999988876 789999999999999999
Q ss_pred HhcCCchHHHHHHhhhc---CCCceeeecCCCccccccccCcccchHHHHHHHHHHHHHHHHHhchhHHhhccCCCCCC
Q 007643 506 KNAGVNGSVVSEKVLSS---DNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPA 581 (595)
Q Consensus 506 ~NaG~d~~~vi~kl~~~---~~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~~~~~~ 581 (595)
+|+|+|..++++||+.. +..|+|+|..++.+.|+++.+||||..||++++..|+|+||+||++|+.|+.++.+.++
T Consensus 451 ~NaGfDa~~ilnkLR~rHA~G~~w~Gvdi~~e~i~dn~~~~VwEP~~VK~Nai~aateAa~lIlsvDeTikn~~S~~~~ 529 (543)
T KOG0361|consen 451 DNAGFDATNILNKLRQRHAQGEKWYGVDINTEGIADNFEKFVWEPSIVKINAITAATEAACLILSVDETIKNPKSQSAP 529 (543)
T ss_pred hhcCCcHHHHHHHHHHHhhcCCceeeeeecccchhhHHHhhccChHHHHHHHHHHHHHhhhheEehhhhhcCCcccCCC
Confidence 99999999999999864 56899999999999999999999999999999999999999999999999998876655
No 24
>TIGR02344 chap_CCT_gamma T-complex protein 1, gamma subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT gamma chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=1.3e-84 Score=724.74 Aligned_cols=454 Identities=22% Similarity=0.305 Sum_probs=401.8
Q ss_pred HHHHHHHHHHHHHHHHhhhhccCcCCCceeeecCCCCcEEecChHHHhccccccCccchHHHHHHHHHHHhcccccCCCc
Q 007643 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (595)
Q Consensus 72 ~~~~~~~~~~v~~la~~v~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~l~l~hP~enigakLl~~~a~~qd~~~GDGT 151 (595)
.+++..|+.+|..|+++|+|||||+||||||+++.|+++|||||+|||++|+++||+ ++|++++|++||+++||||
T Consensus 15 ~~~~~~ni~a~~~l~~~v~ttlGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP~----akll~~~a~~q~~~~GDGT 90 (525)
T TIGR02344 15 RKAQLSNIQAAKAVADIIRTTLGPRAMLKMLLDPMGGIVMTNDGNAILREIDVAHPA----AKSMIELSRTQDEEVGDGT 90 (525)
T ss_pred HHHHHHHHHHHHHHHHHHhcccCCCCCCceEEcCCCCEEEEccHHHHHHhccCCCHH----HHHHHHHHHhhhhhccCCc
Confidence 779999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHcccccCC--ch-HHHHHHhhhcCC------hhHHHHH
Q 007643 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE--DS-ELADVAAVSAGN------NYEVGNM 222 (595)
Q Consensus 152 Tt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~--~~-~L~~va~ts~~~------~~~ls~l 222 (595)
||+|+|+++||+++.+++++|+||..|++||+.|.+.++++|++++++++ +. .|.++|+|++++ ++.|+++
T Consensus 91 tt~viLa~~Ll~~a~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~ls~l 170 (525)
T TIGR02344 91 TSVIILAGEMLSVAEPFLEQNIHPTIIIRAYKKALDDALSVLEEISIPVDVNDDAAMLKLIQSCIGTKFVSRWSDLMCDL 170 (525)
T ss_pred chhHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccccCCCCHHHHHHHHHHhhccccchhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999986 33 799999988654 5899999
Q ss_pred HHHHHHhhccCC-----------c--EEeeCCCcccceeEEEeeeEEeecccCCccccCcccCcccccCeeEEEecccCC
Q 007643 223 IAEAMSKVGRKG-----------V--VTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKIT 289 (595)
Q Consensus 223 i~~Av~~v~~~g-----------~--I~v~~G~~~~ds~~li~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~ 289 (595)
+++|+..+++++ . |.+.+|++++|| ++++|++|++++.++ +|+.+++||+|+++++++.
T Consensus 171 ~~~Ai~~v~~~~~~~~~~~d~~~~I~i~ki~Gg~~~dS-~lv~Gvvi~k~~~~~-------~m~~~~~n~kIlll~~~Le 242 (525)
T TIGR02344 171 ALDAVRTVKRDLGNGRKEIDIKRYAKVEKIPGGDIEDS-CVLKGVMINKDVTHP-------KMRRYIENPRIVLLDCPLE 242 (525)
T ss_pred HHHHHHHhhccccCCCCccChhhceEEEEecCCChHhc-CcccceEEecccCCC-------CCccccCCCCEEEEecccc
Confidence 999999998653 1 334579999998 999999999997764 4788999999999999764
Q ss_pred C-------------HHHHHHH-----------HHHHHHcCCCEEEEeccccHHHHHHHHHHhhcccceeEEeeCCCcccc
Q 007643 290 N-------------ARDLINV-----------LEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGER 345 (595)
Q Consensus 290 ~-------------~~~i~~~-----------le~i~~~g~~lvIi~~~i~~~aL~~L~~n~~~g~~~i~av~~~~~~~~ 345 (595)
. ++++.++ ++++.+.|++|||+++.|++.++++|..+ +|+|++ ++
T Consensus 243 ~~~~~~~~~i~i~~~~~~~~~l~~E~~~l~~~v~~i~~~~~~vIi~~k~I~dla~~~l~~~------~I~av~-----~v 311 (525)
T TIGR02344 243 YKKGESQTNVEIMKEEDWNRILQMEEEYVQLMCEDIIAVKPDLVITEKGVSDLAQHYLLKA------NISAIR-----RV 311 (525)
T ss_pred cccccccceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCccHHHHHHHhHC------CceEEe-----cC
Confidence 3 4666554 44888899999999999999999988764 677765 78
Q ss_pred hhhhHHHHHHHhCCeEeecCCCccccCCCCCCcee-eeEEEE---ecCeEEEEccCCCchhhhhHHHHHHHHHHhhchHH
Q 007643 346 KSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGN-ASKVVL---TKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDY 421 (595)
Q Consensus 346 ~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~-~~~v~i---~~~~~~ii~~~~~~~~i~~r~~~lr~~l~~~~~~~ 421 (595)
++++|+|||++|||++++ ++++++++.||+ |+.|++ +++.|+++.+++++...+. .|| +++ ++
T Consensus 312 ~~~~LerIa~~tGa~ii~-----~l~~l~~~~lG~~~~~v~~~~ig~~~~~~~~g~~~~~~~TI---lLr----G~t-~~ 378 (525)
T TIGR02344 312 RKTDNNRIARACGATIVN-----RPEELRESDVGTGCGLFEVKKIGDEYFTFFTECKDPKACTI---LLR----GAS-KD 378 (525)
T ss_pred CHHHHHHHHHHhCCeEec-----chhhCCHhhcCCcCCEEEEEEECCeEEEEEEcCCCCCEEEE---EEE----cCC-HH
Confidence 899999999999999999 688899999999 998875 6788999988876554321 344 333 33
Q ss_pred HHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHcC-ccccchHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhHH
Q 007643 422 EREKLNERIAKLSGGVAVIQLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYP 500 (595)
Q Consensus 422 ~~e~L~ERi~~l~gg~a~i~~~i~Dal~~~k~al~~g-vVpGGGa~e~~ls~~L~~~~~~~~~~~q~~~i~~~a~AL~~i 500 (595)
+.+++ +|+++||+++++++++++ +|||||++||+++.+|++++++.++.+| +++++|++||+.|
T Consensus 379 ~l~E~--------------er~l~DAl~~vk~~~~~~~vvpGGGa~e~~ls~~l~~~~~~~~~~~~-~~~~~~a~al~~i 443 (525)
T TIGR02344 379 VLNEI--------------ERNLQDAMAVARNVLLEPKLLPGGGATEMAVSVYLAKKASKLEGVQQ-WPYRAVADALEII 443 (525)
T ss_pred HHHHH--------------HHHHHHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHHHHhcCCCHHH-HHHHHHHHHHHHH
Confidence 32322 279999999999999996 9999999999999999998877777665 8999999999999
Q ss_pred HHHHHHhcCCchHHHHHHhhhcC----CCceeeecCCCccccccccCcccchHHHHHHHHHHHHHHHHHhchhHHhhccC
Q 007643 501 LKLIAKNAGVNGSVVSEKVLSSD----NHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIK 576 (595)
Q Consensus 501 p~~L~~NaG~d~~~vi~kl~~~~----~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~ 576 (595)
|++||+|||+|+.+++.+|+..| +.++|||+.+|++.||++.|||||+.||+++|+.|+|+|++||+||++|...|
T Consensus 444 p~~La~NaG~d~~~~l~~l~~~h~~~~~~~~Gid~~~g~~~d~~~~gV~dp~~vk~~~l~~A~e~a~~iL~id~ii~~~~ 523 (525)
T TIGR02344 444 PRTLAQNCGVNVIRTLTELRAKHAQEGNCTWGIDGETGKIVDMKEKGIWEPLAVKLQTYKTAIESACMLLRIDDIVSGVK 523 (525)
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHccCCCeEeEECCCCccccchhccceecHHHHHHHHHHHHHHHHHHHhhhHHhhcCC
Confidence 99999999999999999997632 45799999999999999999999999999999999999999999999998765
No 25
>TIGR02343 chap_CCT_epsi T-complex protein 1, epsilon subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT epsilon chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=3.6e-84 Score=720.70 Aligned_cols=452 Identities=24% Similarity=0.363 Sum_probs=398.0
Q ss_pred HHHHHHHHHHHHHHHHhhhhccCcCCCceeeecCCCCcEEecChHHHhccccccCccchHHHHHHHHHHHhcccccCCCc
Q 007643 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (595)
Q Consensus 72 ~~~~~~~~~~v~~la~~v~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~l~l~hP~enigakLl~~~a~~qd~~~GDGT 151 (595)
.+++..++.+|..|+++|++||||+||||||+++.|+++|||||+||+|+|+++||+ |+|++++|++||+++||||
T Consensus 26 ~~a~~~ni~a~~~i~~~vkttlGP~G~~KmI~~~~G~~~ITnDG~tIlk~l~~~hP~----akll~~~a~~qd~~~GDGT 101 (532)
T TIGR02343 26 LEAIKSNIAAAKSVASILRTSLGPKGMDKMLQSPDGDITVTNDGATILSQMDVDNPI----AKLMVELSKSQDDEIGDGT 101 (532)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCCeEEEEcCCCCEEEeCcHHHHHHHccCCCHH----HHHHHHHHHHHHHHhcCCc
Confidence 789999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHcccccCCc----h-HHHHHHhhhcCC------hhHHH
Q 007643 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED----S-ELADVAAVSAGN------NYEVG 220 (595)
Q Consensus 152 Tt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~~----~-~L~~va~ts~~~------~~~ls 220 (595)
||+|+|+++||+++.+++++|+||..|++||+.|++.++++|+++++++++ . .|.++|+|+++. .+.|+
T Consensus 102 ttvvvLa~~Ll~~a~~li~~gihp~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~l~~ia~t~l~sK~~~~~~~~ls 181 (532)
T TIGR02343 102 TGVVVLAGALLEQAEALLDKGIHPIKIAEGFEVAARVAVEHLEEISEEISDDNNNKEPLIQAAKTSLGSKIVSKCHRRFA 181 (532)
T ss_pred ccHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccccCcCCCCHHHHHHHHHHhhccchhhHHHHHHH
Confidence 999999999999999999999999999999999999999999999988743 3 799999998864 47899
Q ss_pred HHHHHHHHhhccC--C-------cEEeeCCCcccceeEEEeeeEEeecccCCccccCcccCcccccCeeEEEeccc----
Q 007643 221 NMIAEAMSKVGRK--G-------VVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKK---- 287 (595)
Q Consensus 221 ~li~~Av~~v~~~--g-------~I~v~~G~~~~ds~~li~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~---- 287 (595)
+++++|+..+... + .|.+.+|++++|+ ++++|++|+++|.+|+ |++.++||+|++++++
T Consensus 182 ~i~~~av~~i~~~~~~~~d~~~I~i~ki~Ggs~~ds-~~v~Gi~i~~~~~~~~-------m~~~~~n~kI~l~~~~le~~ 253 (532)
T TIGR02343 182 EIAVDAVLMVADMERRDVDFDLIKVEGKVGGSLEDT-KLIKGIIIDKDFSHPQ-------MPKEVKDAKIAILTCPFEPP 253 (532)
T ss_pred HHHHHHHHhhhhcCCCcCCHHHeeEEEecCCCcccc-eeEeeEEEecCcCCCC-------CCeeecCCcEEEEEeecccc
Confidence 9999999988531 1 1444699999999 9999999999999987 4556789999998864
Q ss_pred ---------CCCHHHH-----------HHHHHHHHHcCCCEEEEeccccHHHHHHHHHHhhcccceeEEeeCCCcccchh
Q 007643 288 ---------ITNARDL-----------INVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKS 347 (595)
Q Consensus 288 ---------i~~~~~i-----------~~~le~i~~~g~~lvIi~~~i~~~aL~~L~~n~~~g~~~i~av~~~~~~~~~~ 347 (595)
+++++++ .++++.+.+.|+||||++++|++.++++|..| ++.+|++ +++
T Consensus 254 ~~~~~~~~~i~~~~~~~~~~~~E~~~l~~~l~~i~~~g~~lvi~~~~I~~~al~~L~~~------~i~~v~~-----~~~ 322 (532)
T TIGR02343 254 KPKTKHKLDISSVEEYKKLQKYEQQKFAEMIDDIKKSGANIVICQWGFDDEANHLLLQN------DLPAVRW-----VGG 322 (532)
T ss_pred ccccceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEeCCCccHHHHHHHHHC------CcEEEEc-----CCH
Confidence 5666666 67799999999999999999999999999988 4567774 446
Q ss_pred hhHHHHHHHhCCeEeecCCCccccCCCCCCceeeeEEE---Eec--CeEEEEccCCCchhhhhHHHHHHHHHHhhchHHH
Q 007643 348 QYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVV---LTK--DTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYE 422 (595)
Q Consensus 348 ~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~---i~~--~~~~ii~~~~~~~~i~~r~~~lr~~l~~~~~~~~ 422 (595)
++|+|||++|||++++ +++++++++||+|++|+ ++. ++++++.+++++...+. .|| +++ +++
T Consensus 323 ~~l~~Ia~~tGa~~i~-----~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~i~~~~~~~~~TI---llr----G~t-~~~ 389 (532)
T TIGR02343 323 HELELIAIATGGRIVP-----RFEELSEDKLGKAGLVREISFGTTKDRMLVIEQCKNSKAVTI---FIR----GGN-KMI 389 (532)
T ss_pred HHHHHHHHHhCCEEec-----ccccCCHhHCcccceEEEEEecCCcceEEEEECCCCCCEEEE---EEE----CCC-HHH
Confidence 7799999999999999 68899999999999987 333 57899988876554321 243 333 333
Q ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHcC-ccccchHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhHHH
Q 007643 423 REKLNERIAKLSGGVAVIQLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPL 501 (595)
Q Consensus 423 ~e~L~ERi~~l~gg~a~i~~~i~Dal~~~k~al~~g-vVpGGGa~e~~ls~~L~~~~~~~~~~~q~~~i~~~a~AL~~ip 501 (595)
.+++ +|+++||+++++++++++ +|||||++||+++++|+++++++++.+| +++++|++||+.||
T Consensus 390 l~E~--------------er~l~DAl~~v~~~i~~~~vvpGGGa~e~~ls~~l~~~~~~~~~~~~-~~i~~fa~ALe~ip 454 (532)
T TIGR02343 390 IEEA--------------KRSIHDALCVVRNLIKNSRIVYGGGAAEISCSLAVSQEADKYSGVEQ-YAIRAFADALEEIP 454 (532)
T ss_pred HHHH--------------HHHHHHHHHHHHHHHhCCCEEeCcCHHHHHHHHHHHHHhccCCcHHH-HHHHHHHHHHHHHH
Confidence 3322 279999999999999996 9999999999999999999877777765 89999999999999
Q ss_pred HHHHHhcCCchHHHHHHhhhc----CCCceeeecCCCccccccccCcccchHHHHHHHHHHHHHHHHHhchhHHhhc
Q 007643 502 KLIAKNAGVNGSVVSEKVLSS----DNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVE 574 (595)
Q Consensus 502 ~~L~~NaG~d~~~vi~kl~~~----~~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~~ 574 (595)
++|++|||+|+.+++.+|+.. ++.++|||+.+|++.||++.|||||+.||+++|+.|+|+|++||+||++|..
T Consensus 455 ~~La~NaG~d~~~~l~~l~~~h~~~~~~~~Gid~~~g~i~d~~~~gV~Dp~~vk~~al~~A~e~a~~iL~id~ii~~ 531 (532)
T TIGR02343 455 MALAENSGLDPIGTLSDLKSLQMKEKNPHLGVDCLGDGTNDMKEQGVFETLIGKKQQIQLATQLVRMILKIDDVISP 531 (532)
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHhcCCCccCeeCCCCccccchhccCeecHHHHHHHHHHHHHHHHHHHhHhhhccC
Confidence 999999999999999999753 2457999999999999999999999999999999999999999999999953
No 26
>TIGR02342 chap_CCT_delta T-complex protein 1, delta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT delta chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=2.9e-84 Score=719.97 Aligned_cols=458 Identities=21% Similarity=0.312 Sum_probs=397.0
Q ss_pred HHHHHHHHHHHHHHHHhhhhccCcCCCceeeecCCCCcEEecChHHHhccccccCccchHHHHHHHHHHHhcccccCCCc
Q 007643 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (595)
Q Consensus 72 ~~~~~~~~~~v~~la~~v~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~l~l~hP~enigakLl~~~a~~qd~~~GDGT 151 (595)
.+++..|+.+|..++++|++||||+||||||+++.|+++|||||+||+++|+++||+ ++|++++|++||+++||||
T Consensus 8 ~~~~~~ni~a~~~ia~~~kttlGP~G~~kmi~~~~g~~~ITnDG~tIlk~i~~~hP~----akll~~~a~~qd~~~GDGT 83 (517)
T TIGR02342 8 TDVRTSNIVAAKAVADAIRTSLGPRGMDKMIQSGNGEVIITNDGATILKQMGVIHPA----AKMLVELSKAQDIEAGDGT 83 (517)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcCCCCCcEEEEcCCCCEEEeCCHHHHHHhccccChH----HHHHHHHHHHHHHHhCCCc
Confidence 668899999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHcccccCC--ch-HHHHHHhhhcCC------hhHHHHH
Q 007643 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE--DS-ELADVAAVSAGN------NYEVGNM 222 (595)
Q Consensus 152 Tt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~--~~-~L~~va~ts~~~------~~~ls~l 222 (595)
||+|+|+++||+++.+++++|+||+.|++||+.|.+.++++|+++++|++ +. .|.++|+|++++ .+.|+++
T Consensus 84 tt~viLa~~Ll~~a~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~l~~va~tsl~sK~~~~~~~~ls~l 163 (517)
T TIGR02342 84 TSVVILAGALLGACETLLERGIHPTTISESFQIAADEAIKILDEMSIPVDLSDREILIKSATTSLSSKVVSQYSSLLAPL 163 (517)
T ss_pred chHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccccCccCHHHHHHHHHHHhccccchhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999986 44 799999999864 4678999
Q ss_pred HHHHHHhhccC---Cc-------EEeeCCCcccceeEEEeeeEEeecccCCccccCcccCcccccCeeEEEecccC----
Q 007643 223 IAEAMSKVGRK---GV-------VTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKI---- 288 (595)
Q Consensus 223 i~~Av~~v~~~---g~-------I~v~~G~~~~ds~~li~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~i---- 288 (595)
+++|+..++++ +. |....|+++.|+ ++++|++|+++|.++ .+||+.++||+|+++++++
T Consensus 164 ~~~a~~~v~~~~~~~~~~~~~i~i~k~~Ggs~~ds-~li~Givl~k~~~~~------~~mpk~i~n~kI~ll~~~Le~~~ 236 (517)
T TIGR02342 164 AVDAVLKVIDPENDKNVDLNDIKVVKKLGGTIDDT-ELIEGLVFTQKASRS------AGGPTRIEKAKIGLIQFQISPPK 236 (517)
T ss_pred HHHHHHHHhccccCCccCHHHeeEEeccCCChhhc-EEEeeEEEecccccc------CCCCccccCCcEEEEecCCCCCc
Confidence 99999999752 22 233589999999 999999999999874 2477788999999998753
Q ss_pred ---------CCH-----------HHHHHHHHHHHHcCCCEEEEeccccHHHHHHHHHHhhcccceeEEeeCCCcccchhh
Q 007643 289 ---------TNA-----------RDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQ 348 (595)
Q Consensus 289 ---------~~~-----------~~i~~~le~i~~~g~~lvIi~~~i~~~aL~~L~~n~~~g~~~i~av~~~~~~~~~~~ 348 (595)
.++ +++.++++.+.+.|+||||++++|++++++.++.|.+.+ .+|+||+ +++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~E~~~l~~~v~~i~~~g~~lvi~~~~I~~~~l~~l~~~~l~~-~~I~av~-----~v~~~ 310 (517)
T TIGR02342 237 TDMENQVIVNDYAQMDRVLKEERKYILNIVKKIKKTGCNVLLIQKSILRDAVNDLALHFLAK-MKIMVVK-----DIERE 310 (517)
T ss_pred ccccceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCcccccccHHHHHHHhh-CCceEEe-----cCCHH
Confidence 332 245667899999999999999999655555555555544 4889988 77799
Q ss_pred hHHHHHHHhCCeEeecCCCccccCCCCCCceeeeEEE---EecCeEEEEccCCCc-hhhhhHHHHHHHHHHhhchHHHHH
Q 007643 349 YLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVV---LTKDTTTIVGDGSTQ-DAVSKRVAQIRTLIENAEQDYERE 424 (595)
Q Consensus 349 ~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~---i~~~~~~ii~~~~~~-~~i~~r~~~lr~~l~~~~~~~~~e 424 (595)
+|+|||++|||++++ +++++++++||+|+.|+ ++++.++++.++.++ ...+ ..|| +++ +++.+
T Consensus 311 ~LerIa~~tGa~ii~-----~~~~l~~~~LG~~~~v~~~~~~~~~~~~i~~~~~~~~~~t---Illr----G~t-~~~l~ 377 (517)
T TIGR02342 311 EVEFICKTIGCKPIA-----SIDHFTADKLGSAELVEEVTTDGGKIIKITGIQNAGKTVT---VLLR----GSN-KLVID 377 (517)
T ss_pred HHHHHHHHHCCEEEc-----chhhcCcccCcCCceEEEEEECCeEEEEEEccCCCCceEE---EEEe----CCc-HHHHH
Confidence 999999999999999 58888999999999998 345677778777553 2221 1243 333 33333
Q ss_pred HHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHcC-ccccchHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhHHHHH
Q 007643 425 KLNERIAKLSGGVAVIQLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKL 503 (595)
Q Consensus 425 ~L~ERi~~l~gg~a~i~~~i~Dal~~~k~al~~g-vVpGGGa~e~~ls~~L~~~~~~~~~~~q~~~i~~~a~AL~~ip~~ 503 (595)
+++ |+++||+++++++++++ +|||||++||+++++|++++++.++.+| +++++|++||+.||++
T Consensus 378 E~e--------------r~i~DAl~~v~~~~~~~~~VpGGGa~e~~ls~~l~~~~~~~~~~~~-~~i~~~a~al~~ip~~ 442 (517)
T TIGR02342 378 EAE--------------RSLHDALCVIRSLVKKRGLIPGGGAPEIEIAIKLSKLARTMKGVES-YCVRAFADALEVIPYT 442 (517)
T ss_pred HHH--------------HHHHHHHHHHHHHhhCCCEEECcCHHHHHHHHHHHHHHhcCCcHHH-HHHHHHHHHHHHHHHH
Confidence 222 79999999999999985 9999999999999999999877777665 8999999999999999
Q ss_pred HHHhcCCchHHHHHHhhhc---CCCceeeecCCCccccccccCcccchHHHHHHHHHHHHHHHHHhchhHHhhc
Q 007643 504 IAKNAGVNGSVVSEKVLSS---DNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVE 574 (595)
Q Consensus 504 L~~NaG~d~~~vi~kl~~~---~~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~~ 574 (595)
|++|||+|+.+++.+|+.. ++.++|||+.+|+++||++.|||||+.||+++|++|+++|++|||||++|+.
T Consensus 443 La~NaG~d~~~~l~~l~~~h~~~~~~~Gid~~~g~i~d~~~~gI~dp~~vk~~ai~~A~e~a~~iL~iD~ii~~ 516 (517)
T TIGR02342 443 LAENAGLNPIDVVTELRNRHANGEKYAGISVRKGGITDMLEEEVLQPLLVTTSAVTLASETVRMILKIDDIVFT 516 (517)
T ss_pred HHHHcCCCHHHHHHHHHHHHHcCCCccceecCCCCccchhhccceEcHHHHHHHHHHHHHHHHHHhcccceeec
Confidence 9999999999999999864 3568999999999999999999999999999999999999999999999875
No 27
>TIGR02345 chap_CCT_eta T-complex protein 1, eta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT eta chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=4.8e-84 Score=719.03 Aligned_cols=455 Identities=21% Similarity=0.307 Sum_probs=400.9
Q ss_pred HHHHHHHHHHHHHHHHhhhhccCcCCCceeeecCCCCcEEecChHHHhccccccCccchHHHHHHHHHHHhcccccCCCc
Q 007643 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (595)
Q Consensus 72 ~~~~~~~~~~v~~la~~v~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~l~l~hP~enigakLl~~~a~~qd~~~GDGT 151 (595)
.+++..|+.+|..++++|++||||+||||||++++| ++|||||+||+|+|+++||+ |+|++++|++||+++||||
T Consensus 17 ~~~~~~ni~a~~~i~~~v~ttlGP~G~~k~i~~~~g-~~iTnDG~TIlk~i~~~hP~----a~ll~~~a~~q~~~~GDGT 91 (522)
T TIGR02345 17 KGQLISNINACVAIAEILKTTLGPRGMDKLIVGKNG-ATVSNDGATILKLLDIVHPA----AKTLVDIAKSQDSEVGDGT 91 (522)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCCceEEECCCC-cEEeCcHHHHHHHhcccChH----HHHHHHHHHHHHHHhCCCc
Confidence 789999999999999999999999999999999999 99999999999999999999 9999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHcccccCC-----ch-HHHHHHhhhcC------ChhHH
Q 007643 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE-----DS-ELADVAAVSAG------NNYEV 219 (595)
Q Consensus 152 Tt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~-----~~-~L~~va~ts~~------~~~~l 219 (595)
||+|||+++||+++.+++++|+||..|++||+.|.+.++++|+++++|++ +. .|.++|+|+++ ++++|
T Consensus 92 Tt~vvLa~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~va~tsl~sK~~~~~~~~l 171 (522)
T TIGR02345 92 TSVVILAGELLKEAKPFIEEGVHPQLIIRCYREALMLAIEKLKEIAVTIDEVKGEQREVLEKCAATALNSKLIAHEKEFF 171 (522)
T ss_pred hhHHHHHHHHHHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccCcCCcccccHHHHHHHHHHHhccccccchHHHH
Confidence 99999999999999999999999999999999999999999999999987 33 79999999976 57899
Q ss_pred HHHHHHHHHhhccCC------cEEeeCCCcccceeEEEeeeEEeecccCCccccCcccCcccccCeeEEEecccC-----
Q 007643 220 GNMIAEAMSKVGRKG------VVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKI----- 288 (595)
Q Consensus 220 s~li~~Av~~v~~~g------~I~v~~G~~~~ds~~li~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~i----- 288 (595)
++++++|+.++++++ .|...+|++++|| ++++|++|+++|.+|||.+ |+++++||+|+++|+++
T Consensus 172 ~~l~~~A~~~v~~~~~~~~~I~i~ki~Ggs~~ds-~~v~Giv~~~~~~~~~~~~----~~~~~~n~kIll~~~~Le~~~~ 246 (522)
T TIGR02345 172 SKMIVDAVLQLDIDDLDLKLIGVKKVQGGSLQDS-VLVNGVAFKKTFSYAGFEQ----QPKKFANPKILLLNVELELKAE 246 (522)
T ss_pred HHHHHHHHHHHhhccCChhHheEEeecCCCHHhc-ceecceEEecccCcccccc----CCceeccceEEEEecCcccCcc
Confidence 999999999998652 2334599999999 7999999999999998754 66789999999999874
Q ss_pred --------CCHHHH-----------HHHHHHHHHcCCCEEEEeccccHHHHHHHHHHhhcccceeEEeeCCCcccchhhh
Q 007643 289 --------TNARDL-----------INVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQY 349 (595)
Q Consensus 289 --------~~~~~i-----------~~~le~i~~~g~~lvIi~~~i~~~aL~~L~~n~~~g~~~i~av~~~~~~~~~~~~ 349 (595)
++++++ ...++.+.+.|+++|+++++|++.++++|..+ +|++++ ++..++
T Consensus 247 ~~~~~i~~~~~~~~~~~~~~e~~~i~~~i~~i~~~g~~vv~~~~~i~d~~~~~L~~~------~I~~~~-----~v~~~d 315 (522)
T TIGR02345 247 KDNAEIRVEDVEDYQAIVDAEWAIIFRKLEKIVESGANVVLSKLPIGDLATQYFADH------NIFCAG-----RVSDED 315 (522)
T ss_pred ccceEEEECCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCCCccHHHHHHHHHC------CcEEEe-----cCCHHH
Confidence 334332 34566788889999999999999999998876 567665 667889
Q ss_pred HHHHHHHhCCeEeecCCCccccCCCCCCceeeeEEEE---ecCeEEEEccCCCchhhhhHHHHHHHHHHhhchHHHHHHH
Q 007643 350 LDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL---TKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKL 426 (595)
Q Consensus 350 L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i---~~~~~~ii~~~~~~~~i~~r~~~lr~~l~~~~~~~~~e~L 426 (595)
+++++++|||++++ +++++++++||+|+.|+. ++++++++.+++++...+. .|| ++++ ++.++.
T Consensus 316 l~ria~~tga~ii~-----~~~~l~~~~LG~~~~ie~~~~~~~r~~~~~g~~~~~~~TI---~lr----G~t~-~~l~E~ 382 (522)
T TIGR02345 316 LKRVVKACGGSIQS-----TTSDLEADVLGTCALFEERQIGSERYNYFTGCPHAKTCTI---ILR----GGAE-QFIEEA 382 (522)
T ss_pred HHHHHHHhCCeEEc-----chhhCChhhccCCceEEEEEECCeEEEEEEcCCCCceEEE---EEE----CCCH-HHHHHH
Confidence 99999999999998 688888999999999974 5788999998866544321 233 3333 332222
Q ss_pred HHHHHHhcCcHHHHHHHHHHHHHHHHHHHHcC-ccccchHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhHHHHHHH
Q 007643 427 NERIAKLSGGVAVIQLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIA 505 (595)
Q Consensus 427 ~ERi~~l~gg~a~i~~~i~Dal~~~k~al~~g-vVpGGGa~e~~ls~~L~~~~~~~~~~~q~~~i~~~a~AL~~ip~~L~ 505 (595)
+|+++||++++|++++++ +|||||++|++++.+|++++++..+.+| +++++|++||+.||++||
T Consensus 383 --------------~r~i~DAl~~~~~~~~~~~vvpGGG~~e~~ls~~l~~~~~~~~~~~~-~~i~~~a~aL~~ip~~La 447 (522)
T TIGR02345 383 --------------ERSLHDAIMIVRRALKARKIVAGGGAIEMELSKILREHSKKIDGKQQ-LIIEAFAKALEIIPRSLC 447 (522)
T ss_pred --------------HHHHHHHHHHHHHHhcCCCEEeCCCHHHHHHHHHHHHHHhhCCCHHH-HHHHHHHHHHHHHHHHHH
Confidence 279999999999999985 9999999999999999998776666665 899999999999999999
Q ss_pred HhcCCchHHHHHHhhhc---CCCceeeecCCCccccccccCcccchHHHHHHHHHHHHHHHHHhchhHHhhcc
Q 007643 506 KNAGVNGSVVSEKVLSS---DNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEI 575 (595)
Q Consensus 506 ~NaG~d~~~vi~kl~~~---~~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~~~ 575 (595)
+|||+|+.+++.+|+.. ++.++|||+.+|++.||++.|||||+.||+++|++|+|+|++||+||++|+.+
T Consensus 448 ~NaG~d~~~vl~~l~~~h~~~~~~~G~d~~~~~i~d~~~~gI~dp~~vk~~~l~~A~e~a~~iL~id~ii~~~ 520 (522)
T TIGR02345 448 ENAGFDSIEILNKLRSRHAKGGKWYGVDINTEDIGDNFENFVWEPLLVKKNALKAAFEAACTILSIDETIMNP 520 (522)
T ss_pred HHCCCCHHHHHHHHHHHHHcCCCccceeCCCCcccchhhcCceEcHHHHHHHHHHHHHHHHHHHhHHHHHhCC
Confidence 99999999999999764 34579999999999999999999999999999999999999999999999773
No 28
>cd03336 TCP1_beta TCP-1 (CTT or eukaryotic type II) chaperonin family, beta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=1.2e-83 Score=715.15 Aligned_cols=453 Identities=23% Similarity=0.329 Sum_probs=398.8
Q ss_pred HHHHHHHHHHHHHHHHhhhhccCcCCCceeeecC--CCCcEEecChHHHhccccccCccchHHHHHHHHHHHhcccccCC
Q 007643 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESK--YGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGD 149 (595)
Q Consensus 72 ~~~~~~~~~~v~~la~~v~stlGP~G~~kmI~~~--~g~~~ITnDG~TIlk~l~l~hP~enigakLl~~~a~~qd~~~GD 149 (595)
+++++.++.+|..++++|+|||||+||+|||+++ +|+++|||||+||+|+|+++||. |+|++++|++||+++||
T Consensus 12 ~~a~~~n~~~~~~i~~~v~tslGP~G~~Kmi~~~~~~g~~~iTnDG~tIlk~l~~~hP~----akll~~~a~~qd~~~GD 87 (517)
T cd03336 12 ETARLSSFVGAIAIGDLVKTTLGPKGMDKILQSVGRSGGVTVTNDGATILKSIGVDNPA----AKVLVDISKVQDDEVGD 87 (517)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCcCceEeecCCCCCCeEEeccHHHHHHHccCcChH----HHHHHHHHHHHHhHhCC
Confidence 7799999999999999999999999999999998 59999999999999999999997 99999999999999999
Q ss_pred CcchHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHcccccCC-----ch-HHHHHHhhhcCC------hh
Q 007643 150 GTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE-----DS-ELADVAAVSAGN------NY 217 (595)
Q Consensus 150 GTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~-----~~-~L~~va~ts~~~------~~ 217 (595)
||||+|||+++||+++.+++++|+||..|++||+.|.+.++++|++++++++ +. .|.++|+|+++. ++
T Consensus 88 GTTtvvvLa~~Ll~~a~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~~l~~ia~t~lssk~~~~~~~ 167 (517)
T cd03336 88 GTTSVTVLAAELLREAEKLVAQKIHPQTIIEGYRMATAAAREALLSSAVDHSSDEEAFREDLLNIARTTLSSKILTQDKE 167 (517)
T ss_pred ChhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccCcccccchhHHHHHHHHHhhccccccchhHH
Confidence 9999999999999999999999999999999999999999999999999884 12 789999987643 58
Q ss_pred HHHHHHHHHHHhhccC---C--cEEeeCCCcccceeEEEeeeEEeecccCCccccCcccCcccccCeeEEEecccCC---
Q 007643 218 EVGNMIAEAMSKVGRK---G--VVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKIT--- 289 (595)
Q Consensus 218 ~ls~li~~Av~~v~~~---g--~I~v~~G~~~~ds~~li~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~--- 289 (595)
+|++|+++|+.+++.. . .|.+.+|++++|+ ++++|+++++++.++ |+++++||+|+++|+++.
T Consensus 168 ~l~~l~~~A~~~v~~~~~~~~i~i~ki~G~s~~ds-~l~~G~v~~~~~~~~--------~~~~~~n~kIli~~~~le~~~ 238 (517)
T cd03336 168 HFAELAVDAVLRLKGSGNLDAIQIIKKLGGSLKDS-YLDEGFLLDKKIGVN--------QPKRIENAKILIANTPMDTDK 238 (517)
T ss_pred HHHHHHHHHHHHhhccCCccceeEEEccCCCccce-EEEeeEEEecccCCC--------CCCeeccccEEEEecCCCccc
Confidence 8999999999999632 1 2444689999999 899999999986542 577899999999999654
Q ss_pred -----------CHHHHH-----------HHHHHHHHcCCCEEEEeccccHHHHHHHHHHhhcccceeEEeeCCCcccchh
Q 007643 290 -----------NARDLI-----------NVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKS 347 (595)
Q Consensus 290 -----------~~~~i~-----------~~le~i~~~g~~lvIi~~~i~~~aL~~L~~n~~~g~~~i~av~~~~~~~~~~ 347 (595)
+++++. +.++.+++.|++++++++.|++.++++|..+ +|+||++|+ +
T Consensus 239 ~~~~~~~~~~~~~~~~~~l~~~E~~~~~~~v~~I~~~gv~~v~~~~~I~~~~~~~l~~~------~I~av~~v~-----~ 307 (517)
T cd03336 239 IKIFGAKVRVDSTAKVAEIEEAEKEKMKNKVEKILKHGINCFINRQLIYNYPEQLFADA------GIMAIEHAD-----F 307 (517)
T ss_pred ccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCCCccHHHHHHHHHC------CcEEEecCC-----H
Confidence 555552 3477889999999999999999999998776 679998766 5
Q ss_pred hhHHHHHHHhCCeEeecCCCccccCCCCCCceeeeEEE---EecCeEEEEccCCCchhhhhHHHHHHHHHHhhchHHHHH
Q 007643 348 QYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVV---LTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYERE 424 (595)
Q Consensus 348 ~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~---i~~~~~~ii~~~~~~~~i~~r~~~lr~~l~~~~~~~~~e 424 (595)
.+|+|||++|||++++ +++++++++||+|+.|+ +++++++++.+|++....+. .|| +++ +++.+
T Consensus 308 ~~L~rIa~~tGa~ii~-----~l~~~~~~~LG~~~~v~~~~ig~~~~~~~~~~~~~~~~TI---~lr----G~t-~~~l~ 374 (517)
T cd03336 308 DGVERLALVTGGEIAS-----TFDHPELVKLGTCKLIEEIMIGEDKLIRFSGVAAGEACTI---VLR----GAS-QQILD 374 (517)
T ss_pred HHHHHHHHHhCCEEec-----ccCCCCcccccccceEEEEEECCeEEEEEEccCCCceEEE---EEe----CCC-HHHHH
Confidence 5699999999999998 68899999999999986 46789999998865443321 243 333 33333
Q ss_pred HHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHcC-ccccchHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhHHHHH
Q 007643 425 KLNERIAKLSGGVAVIQLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKL 503 (595)
Q Consensus 425 ~L~ERi~~l~gg~a~i~~~i~Dal~~~k~al~~g-vVpGGGa~e~~ls~~L~~~~~~~~~~~q~~~i~~~a~AL~~ip~~ 503 (595)
+. +|+++||++++++++++| +|||||++|++++++|++++++..+.+| +++++|++||+.||++
T Consensus 375 E~--------------er~i~Dal~~~~~~i~~~~vvpGGGa~e~~ls~~l~~~~~~~~~~~~-~~i~~~a~ALe~ip~~ 439 (517)
T cd03336 375 EA--------------ERSLHDALCVLAQTVKDTRVVLGGGCSEMLMAKAVEELAKKTPGKKS-LAIEAFAKALRQLPTI 439 (517)
T ss_pred HH--------------HHHHHHHHHHHHHHHhCCCEEeCCCHHHHHHHHHHHHHhhhCCCHHH-HHHHHHHHHHHHHHHH
Confidence 22 279999999999999998 9999999999999999999877777665 8999999999999999
Q ss_pred HHHhcCCchHHHHHHhhhc---CCCceeeecCCCccccccccCcccchHHHHHHHHHHHHHHHHHhchhHHhhccC
Q 007643 504 IAKNAGVNGSVVSEKVLSS---DNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIK 576 (595)
Q Consensus 504 L~~NaG~d~~~vi~kl~~~---~~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~ 576 (595)
|++|||+|+.+++.+|+.. ++.++|||+.+|++.||++.|||||+.||+++|+.|+|+|++||+||++|+.+|
T Consensus 440 La~NaG~d~~~~l~~l~~~h~~~~~~~Gid~~~g~~~d~~~~gI~dp~~vk~~~l~~A~e~a~~iL~id~ii~~~~ 515 (517)
T cd03336 440 IADNAGYDSAELVAQLRAAHYNGNTTAGLDMRKGTVGDMKELGITESFKVKRQVLLSASEAAEMILRVDDIIKCAP 515 (517)
T ss_pred HHHhCCCCHHHHHHHHHHHHHcCCCceeeecCCCCccchhhcCceecHHHHHHHHHHHHHHHHHHHhHhHHhhcCC
Confidence 9999999999999999763 356799999999999999999999999999999999999999999999999866
No 29
>PTZ00212 T-complex protein 1 subunit beta; Provisional
Probab=100.00 E-value=9.2e-84 Score=718.03 Aligned_cols=456 Identities=21% Similarity=0.333 Sum_probs=401.7
Q ss_pred HHHHHHHHHHHHHHHHhhhhccCcCCCceeeecC-----CCCcEEecChHHHhccccccCccchHHHHHHHHHHHhcccc
Q 007643 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESK-----YGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDL 146 (595)
Q Consensus 72 ~~~~~~~~~~v~~la~~v~stlGP~G~~kmI~~~-----~g~~~ITnDG~TIlk~l~l~hP~enigakLl~~~a~~qd~~ 146 (595)
+++|..++.+|..++++|+|||||+||||||+++ +|+++|||||+||+|+|+++||. |+|++++|++||++
T Consensus 21 ~~a~~~ni~a~~~i~~~vkttlGP~G~~Kmi~~~~~~~~~G~~~iTnDG~TIlk~i~~~hP~----akll~~~a~~qd~~ 96 (533)
T PTZ00212 21 ETARLQSFVGAIAVADLVKTTLGPKGMDKILQPMSEGPRSGNVTVTNDGATILKSVWLDNPA----AKILVDISKTQDEE 96 (533)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCccceEeecCCCcccCCCEEEeccHHHHHHhccCcCHH----HHHHHHHHHhhhhh
Confidence 7899999999999999999999999999999998 69999999999999999999997 99999999999999
Q ss_pred cCCCcchHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHcccccCCc-----h-HHHHHHhhhcCC-----
Q 007643 147 AGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED-----S-ELADVAAVSAGN----- 215 (595)
Q Consensus 147 ~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~~-----~-~L~~va~ts~~~----- 215 (595)
+||||||+|+|+++||+++.+++++|+||..|++||++|++.++++|+++++++++ . +|.++|+|+++.
T Consensus 97 ~GDGTTtvvvLa~~Ll~~a~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~va~t~l~sk~~~~ 176 (533)
T PTZ00212 97 VGDGTTSVVVLAGELLREAEKLLDQKIHPQTIIEGWRMALDVARKALEEIAFDHGSDEEKFKEDLLNIARTTLSSKLLTV 176 (533)
T ss_pred hCCchhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhCcCCCccchhhHHHHHHHHHHHhcccccch
Confidence 99999999999999999999999999999999999999999999999999998864 3 789999987654
Q ss_pred -hhHHHHHHHHHHHhhccC---C--cEEeeCCCcccceeEEEeeeEEeecccCCccccCcccCcccccCeeEEEecccC-
Q 007643 216 -NYEVGNMIAEAMSKVGRK---G--VVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKI- 288 (595)
Q Consensus 216 -~~~ls~li~~Av~~v~~~---g--~I~v~~G~~~~ds~~li~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~i- 288 (595)
.+.|++++++|+..+... . .|.+.+|++++|+ ++++|+++++++.+ .|+++++||+|+++|+++
T Consensus 177 ~~~~l~~i~~~av~~i~~~~~~~~I~i~ki~Ggsi~ds-~lv~G~v~~~~~~~--------~~~~~i~n~kIll~~~~Le 247 (533)
T PTZ00212 177 EKDHFAKLAVDAVLRLKGSGNLDYIQIIKKPGGTLRDS-YLEDGFILEKKIGV--------GQPKRLENCKILVANTPMD 247 (533)
T ss_pred hHHHHHHHHHHHHHHHhccCCccceEEEEecCcCcccc-EEEEeEEEecccCC--------CCCccccCCcEEEEeCCCC
Confidence 478999999999998532 1 2455799999999 89999999998654 267889999999999985
Q ss_pred -------------CCHHHHH-----------HHHHHHHHcCCCEEEEeccccHHHHHHHHHHhhcccceeEEeeCCCccc
Q 007643 289 -------------TNARDLI-----------NVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGE 344 (595)
Q Consensus 289 -------------~~~~~i~-----------~~le~i~~~g~~lvIi~~~i~~~aL~~L~~n~~~g~~~i~av~~~~~~~ 344 (595)
++++++. +.++.+++.|+++++++++|++.++.+|..+ +|+||+ +
T Consensus 248 ~~k~~~~~~~~~i~~~~~~~~l~~~E~~~i~~~v~~Ii~~gv~vvv~~~~I~d~a~~~L~~~------~I~avr-----~ 316 (533)
T PTZ00212 248 TDKIKIYGAKVKVDSMEKVAEIEAAEKEKMKNKVDKILAHGCNVFINRQLIYNYPEQLFAEA------GIMAIE-----H 316 (533)
T ss_pred CCcccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCCCccHHHHHHHHHC------CCEEEe-----c
Confidence 6665542 2467888999999999999999999998876 578887 4
Q ss_pred chhhhHHHHHHHhCCeEeecCCCccccCCCCCCceeeeEEE---EecCeEEEEccCCCchhhhhHHHHHHHHHHhhchHH
Q 007643 345 RKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVV---LTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDY 421 (595)
Q Consensus 345 ~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~---i~~~~~~ii~~~~~~~~i~~r~~~lr~~l~~~~~~~ 421 (595)
++..+++|||++|||++++ +++++++++||+|+.|+ +++++|+++.+|......+. .|| +++ ++
T Consensus 317 v~~~~l~rIa~~tGa~iis-----~l~~~~~~~LG~~~~v~~~~ig~~~~~~~~~~~~~~~~TI---~lr----G~t-~~ 383 (533)
T PTZ00212 317 ADFDGMERLAAALGAEIVS-----TFDTPEKVKLGHCDLIEEIMIGEDKLIRFSGCAKGEACTI---VLR----GAS-TH 383 (533)
T ss_pred CCHHHHHHHHHHhCCEEee-----cCCCCCHHHccCCceEEEEEECCeEEEEEEccCCCCEEEE---EEE----CCC-hh
Confidence 5678999999999999998 68889999999999998 77899999988865443221 243 333 33
Q ss_pred HHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHcC-ccccchHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhHH
Q 007643 422 EREKLNERIAKLSGGVAVIQLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYP 500 (595)
Q Consensus 422 ~~e~L~ERi~~l~gg~a~i~~~i~Dal~~~k~al~~g-vVpGGGa~e~~ls~~L~~~~~~~~~~~q~~~i~~~a~AL~~i 500 (595)
+.+++ +|+++||++++|+++++| +|||||++|++++.+|++++++..+.+| +++++|++||+.|
T Consensus 384 ~l~E~--------------er~i~DAl~vv~~~i~~~~vVpGGGa~e~~ls~~L~~~~~~~~~~~~-~~i~~~a~aL~~i 448 (533)
T PTZ00212 384 ILDEA--------------ERSLHDALCVLSQTVKDTRVVLGGGCSEMLMANAVEELAKKVEGKKS-LAIEAFAKALRQI 448 (533)
T ss_pred HHHHH--------------HHHHHHHHHHHHHHhhCCCEeeCCCHHHHHHHHHHHHHHhhCCCHHH-HHHHHHHHHHHHH
Confidence 33322 279999999999999998 9999999999999999999877767665 8999999999999
Q ss_pred HHHHHHhcCCchHHHHHHhhhc---CCCceeeecCCCccccccccCcccchHHHHHHHHHHHHHHHHHhchhHHhhccCC
Q 007643 501 LKLIAKNAGVNGSVVSEKVLSS---DNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKE 577 (595)
Q Consensus 501 p~~L~~NaG~d~~~vi~kl~~~---~~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~~ 577 (595)
|++|++|||+|+.+++.+|+.. ++.++|||+.+|++.||++.|||||+.||+++|+.|+|+|++|||||++|...|+
T Consensus 449 p~~La~NaG~d~~~vl~~l~~~h~~~~~~~G~d~~~g~i~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~id~ii~~~~~ 528 (533)
T PTZ00212 449 PTIIADNGGYDSAELVSKLRAEHYKGNKTAGIDMEKGTVGDMKELGITESYKVKLSQLCSATEAAEMILRVDDIIRCAPR 528 (533)
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHHccCCccceeccCCcccchhhccceecHHHHHHHHHHHHHHHHHHHhhhHhhhcCCc
Confidence 9999999999999999999752 3567999999999999999999999999999999999999999999999998754
Q ss_pred CC
Q 007643 578 PE 579 (595)
Q Consensus 578 ~~ 579 (595)
.+
T Consensus 529 ~~ 530 (533)
T PTZ00212 529 QR 530 (533)
T ss_pred cc
Confidence 33
No 30
>TIGR02346 chap_CCT_theta T-complex protein 1, theta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT alpha chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=3.1e-84 Score=721.07 Aligned_cols=460 Identities=23% Similarity=0.316 Sum_probs=398.9
Q ss_pred HHHHHHHHHHHHHHHHhhhhccCcCCCceeeecCCCCcEEecChHHHhccccccCccchHHHHHHHHHHHhcccccCCCc
Q 007643 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (595)
Q Consensus 72 ~~~~~~~~~~v~~la~~v~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~l~l~hP~enigakLl~~~a~~qd~~~GDGT 151 (595)
++++..|+.+|..|+++|++||||+||||||++++|+++|||||+||+|+|+++||+ ++|++++|++||+++||||
T Consensus 17 ~~~~~~ni~a~~~l~~~vkttlGP~G~~kmi~~~~g~~~ITnDG~tIlk~i~~~hP~----akll~e~a~sqd~~~GDGT 92 (531)
T TIGR02346 17 EEAVIKNIEACKELSNITRTSLGPNGMNKMVINHLDKLFVTNDAATILRELEVQHPA----AKLLVMASEMQENEIGDGT 92 (531)
T ss_pred HHHHHHHHHHHHHHHHHHhcccCCCcCCeEEEcCCCCEEEECcHHHHHHhccccCHH----HHHHHHHHHHHhhhhCCCh
Confidence 458999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHcccc-cCCc---h-HHHHHHhhhcC-----ChhHHHH
Q 007643 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSK-EVED---S-ELADVAAVSAG-----NNYEVGN 221 (595)
Q Consensus 152 Tt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~-~v~~---~-~L~~va~ts~~-----~~~~ls~ 221 (595)
||+|||+++||+++.+++++|+||..|++||+.|++.++++|+++++ ++++ . .|.++++|+++ ++++|++
T Consensus 93 Tt~vvLa~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~l~~i~~tsl~sK~~~~~~~ls~ 172 (531)
T TIGR02346 93 NLVIVLAGELLDKAEELIRMGLHPSEIIKGYEQALKKAMEVLEELVVWEVEDVRNKKELIKALKASISSKQYGNEDFLAQ 172 (531)
T ss_pred hhHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCHHHHHHHHHHHhccccCchHHHHHH
Confidence 99999999999999999999999999999999999999999999986 6643 3 78999988874 3889999
Q ss_pred HHHHHHHhhccCC--c-------EEeeCCCcccceeEEEeeeEEeecccCCccccCcccCcccccCeeEEEeccc-----
Q 007643 222 MIAEAMSKVGRKG--V-------VTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKK----- 287 (595)
Q Consensus 222 li~~Av~~v~~~g--~-------I~v~~G~~~~ds~~li~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~----- 287 (595)
++++|+.++++++ . |.+..|++++|+ ++++|++|++++.+ +++.++||+|++++++
T Consensus 173 l~~~Ai~~v~~~~~~~~~~~~I~i~ki~G~s~~ds-~li~Gi~~~~~~~~---------~~k~i~n~kI~l~~~~l~~~~ 242 (531)
T TIGR02346 173 LVAKACSTVMPKNPENFNVDNIRVSKIMGGSISNS-EVLKGMVFNREAEG---------SVKRVKNAKVAVFSCPLDTAT 242 (531)
T ss_pred HHHHHHHHHhhcCCCcCChhHeeEEEecCCChhhc-eeEeeeEEeccCCC---------CceeccCCCEEEEecCcCCCc
Confidence 9999999998654 2 223489999998 99999999998421 4567899999999875
Q ss_pred --------CCCHH-----------HHHHHHHHHHHcCCCEEEEeccccHHHHHHHHHHhhcccceeEEeeCCCcccchhh
Q 007643 288 --------ITNAR-----------DLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQ 348 (595)
Q Consensus 288 --------i~~~~-----------~i~~~le~i~~~g~~lvIi~~~i~~~aL~~L~~n~~~g~~~i~av~~~~~~~~~~~ 348 (595)
++++. ++.++++.+++.|+||||++++|++.++++|..+ +|+||++|+ ..
T Consensus 243 ~~~~~~~~~~~~~~l~~~~~~e~~~i~~~l~~i~~~g~~lvi~~~~I~d~~~~~l~~~------~I~av~~~~-----~~ 311 (531)
T TIGR02346 243 TETKGTVLIHNAEELLNYSKGEENQIEAYIKAIADSGVNVIVTGGSVGDMALHYCEKY------NIMVLKIPS-----KF 311 (531)
T ss_pred ccCceEEEECCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEECCCcCHHHHHHHHHC------CcEEEecCC-----HH
Confidence 34443 3466789999999999999999999999988754 789999777 44
Q ss_pred hHHHHHHHhCCeEeecCCCccccCCCCCCceeeeEEEE---ecCeEEEEccCCC-chhhhhHHHHHHHHHHhhchHHHHH
Q 007643 349 YLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL---TKDTTTIVGDGST-QDAVSKRVAQIRTLIENAEQDYERE 424 (595)
Q Consensus 349 ~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i---~~~~~~ii~~~~~-~~~i~~r~~~lr~~l~~~~~~~~~e 424 (595)
+|+|||++|||++++ +++++++++||+|++|++ ++++++++.++.. ....+ ..|| +++ +++.+
T Consensus 312 ~l~~Ia~~tGa~ii~-----~l~~~~~~~LG~a~~v~~~~ig~~~~~~i~~~~~~~~~~t---I~lr----G~t-~~~l~ 378 (531)
T TIGR02346 312 ELRRLCKTVGATPLA-----RLGAPQPEEIGYVDSVYVSEIGGQKVTVFKQENGDSKIST---IILR----GST-KNLLD 378 (531)
T ss_pred HHHHHHHHHCCEEec-----ccccCCHhHccccceEEEEEECCEEEEEEEccCCCCCeEE---EEEE----CCC-HHHHH
Confidence 789999999999998 588888899999999974 5678898887653 22221 1233 333 33333
Q ss_pred HHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHcC-ccccchHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhHHHHH
Q 007643 425 KLNERIAKLSGGVAVIQLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKL 503 (595)
Q Consensus 425 ~L~ERi~~l~gg~a~i~~~i~Dal~~~k~al~~g-vVpGGGa~e~~ls~~L~~~~~~~~~~~q~~~i~~~a~AL~~ip~~ 503 (595)
+++ |+++||++++|+++++| ||||||++||+++.+|++++++..+.+| +++++|++||+.||++
T Consensus 379 E~e--------------r~i~DAl~~~k~ai~~~~vVpGGG~~e~~ls~~L~~~~~~~~~~~~-~~~~~~a~aL~~ip~~ 443 (531)
T TIGR02346 379 DIE--------------RAIDDGVNVIKALVKDNRFLPGAGATEIELALRLKKYANKLPGLDQ-YAIKKFAEAFEIIPRT 443 (531)
T ss_pred HHH--------------HHHHHHHHHHHHHhcCCCEEECcCHHHHHHHHHHHHHhccCCCHHH-HHHHHHHHHHHHHHHH
Confidence 222 79999999999999999 9999999999999999998877666655 8999999999999999
Q ss_pred HHHhcCCchHHHHHHhhhc---CCCceeeecCCCc--cccccccCcccchHHHHHHHHHHHHHHHHHhchhHHhhccCCC
Q 007643 504 IAKNAGVNGSVVSEKVLSS---DNHKYGYNAATGN--YEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEP 578 (595)
Q Consensus 504 L~~NaG~d~~~vi~kl~~~---~~~~~Gid~~~g~--i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~~~ 578 (595)
|++|||+|+.+++.+|+.. ++.++|||+.+|+ +.||++.|||||+.||+++|+.|+|+|++|||||++|...|..
T Consensus 444 L~~NaG~d~~~~~~~l~~~h~~~~~~~Gid~~~~~~~i~d~~~~gI~dp~~vk~~~l~~A~e~a~~iL~id~ii~~~~~~ 523 (531)
T TIGR02346 444 LAENAGLNPNEVIPKLYAAHKKGNTSSGIDIEAESDGVKDASEAGIYDNLATKKWAIKLATEAAVTVLRVDQIIMAKPAG 523 (531)
T ss_pred HHHhCCCCHHHHHHHHHHHHHccCCccceeeeCCCccccChhhcCceEcHHHHHHHHHHHHHHHHHHhhhhHhhccCCCC
Confidence 9999999999999999764 3567999999999 5999999999999999999999999999999999999998777
Q ss_pred CCCCCC
Q 007643 579 EPAMPA 584 (595)
Q Consensus 579 ~~~~~~ 584 (595)
.|+.|+
T Consensus 524 ~~~~~~ 529 (531)
T TIGR02346 524 GPKPPQ 529 (531)
T ss_pred CCCCCC
Confidence 766454
No 31
>cd03337 TCP1_gamma TCP-1 (CTT or eukaryotic type II) chaperonin family, gamma subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=5.7e-83 Score=703.76 Aligned_cols=434 Identities=22% Similarity=0.325 Sum_probs=386.9
Q ss_pred HHHHHHHHHHHHHHHHhhhhccCcCCCceeeecCCCCcEEecChHHHhccccccCccchHHHHHHHHHHHhcccccCCCc
Q 007643 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (595)
Q Consensus 72 ~~~~~~~~~~v~~la~~v~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~l~l~hP~enigakLl~~~a~~qd~~~GDGT 151 (595)
++++..|+.+|..+++++++||||+||+|||+++.|+++|||||+||+++|+++||. |+|++++|++||+++||||
T Consensus 15 ~~~~~~ni~a~~~l~~~~~tslGP~G~~kmi~~~~g~~~iTnDG~tIlk~l~~~hP~----a~ll~~~a~~q~~~~GDGT 90 (480)
T cd03337 15 RKAQLGNIQAAKTVADVIRTCLGPRAMLKMLLDPMGGIVLTNDGNAILREIDVAHPA----AKSMIELSRTQDEEVGDGT 90 (480)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCCcCceEeEcCCCCEEEeccHHHHHHhccccChH----HHHHHHHHHhHHHHhCCCc
Confidence 779999999999999999999999999999999999999999999999999999997 9999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHcccccCC--ch-HHHHHHhhhcC------ChhHHHHH
Q 007643 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE--DS-ELADVAAVSAG------NNYEVGNM 222 (595)
Q Consensus 152 Tt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~--~~-~L~~va~ts~~------~~~~ls~l 222 (595)
||+|+|+++||+++.+++++|+||..|++||+.|.+.++++|++++++++ +. .|.++++|+++ +++.|+++
T Consensus 91 tt~vvL~~~Ll~~a~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~~~~l~~i~~t~l~sK~~~~~~~~ls~l 170 (480)
T cd03337 91 TSVIILAGEILAVAEPFLERGIHPTVIIKAYRKALEDALKILEEISIPVDVNDRAQMLKIIKSCIGTKFVSRWSDLMCNL 170 (480)
T ss_pred chhHhhHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccccccCCHHHHHHHHHHHhccCcchhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999987 44 79999999987 45789999
Q ss_pred HHHHHHhhccC--C---------c--EEeeCCCcccceeEEEeeeEEeecccCCccccCcccCcccccCeeEEEecccCC
Q 007643 223 IAEAMSKVGRK--G---------V--VTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKIT 289 (595)
Q Consensus 223 i~~Av~~v~~~--g---------~--I~v~~G~~~~ds~~li~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~ 289 (595)
+++|+..++++ + . |...+|++++|| ++++|++|++++.+| +|+++++||+|+++++++.
T Consensus 171 v~~Ai~~v~~~~~~~~~~id~~~~I~i~ki~Ggs~~ds-~li~Gvvi~k~~~~~-------~m~~~~~n~kIlll~~~Le 242 (480)
T cd03337 171 ALDAVKTVAVEENGRKKEIDIKRYAKVEKIPGGEIEDS-RVLDGVMLNKDVTHP-------KMRRRIENPRIVLLDCPLE 242 (480)
T ss_pred HHHHHHhhccccCCCCCcCChhhceEEEEecCCCHHhc-ccccceEEeccCCCC-------CCCcEecCCCEEEEecCcc
Confidence 99999999764 2 1 334579999998 999999999999875 4888999999999999976
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEeccccHHHHHHHHHHhhcccceeEEeeCCCcccchhhhHHHHHHHhCCeEeecCCCcc
Q 007643 290 NARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLA 369 (595)
Q Consensus 290 ~~~~i~~~le~i~~~g~~lvIi~~~i~~~aL~~L~~n~~~g~~~i~av~~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~ 369 (595)
. |||++++|+++++++|..| +|++|+ ++++++|+|||++|||++++ +
T Consensus 243 ~-----------------lvi~~k~I~d~al~~L~~~------~I~~v~-----~v~~~~L~rIa~~tGa~ii~-----~ 289 (480)
T cd03337 243 Y-----------------LVITEKGVSDLAQHYLVKA------GITALR-----RVRKTDNNRIARACGATIVN-----R 289 (480)
T ss_pred e-----------------EEEeCCCccHHHHHHHHHC------CcEEEE-----eCCHHHHHHHHHHHCCEEec-----c
Confidence 5 9999999999999999887 678887 57789999999999999999 5
Q ss_pred ccCCCCCCceee-eEEE---EecCeEEEEccCCCchhhhhHHHHHHHHHHhhchHHHHHHHHHHHHHhcCcHHHHHHHHH
Q 007643 370 LDKVGKEVLGNA-SKVV---LTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQLRVE 445 (595)
Q Consensus 370 l~~~~~~~lG~~-~~v~---i~~~~~~ii~~~~~~~~i~~r~~~lr~~l~~~~~~~~~e~L~ERi~~l~gg~a~i~~~i~ 445 (595)
+++++++.||+| +.++ ++++.++++.+++++...+. .|| +++. .+.+++ +|+++
T Consensus 290 ~~~l~~~~LG~~~~~~~~~~~~~~~~~~i~~~~~~~~~TI---llr----G~t~-~~l~e~--------------er~l~ 347 (480)
T cd03337 290 PEELTESDVGTGAGLFEVKKIGDEYFTFITECKDPKACTI---LLR----GASK-DVLNEV--------------ERNLQ 347 (480)
T ss_pred hhhCCHHHcCCcccEEEEEEeCCeEEEEEEcCCCCCEEEE---EEE----CCCH-HHHHHH--------------HHHHH
Confidence 888889999995 4444 35678888888876544321 243 3333 332222 27999
Q ss_pred HHHHHHHHHHHcC-ccccchHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhHHHHHHHHhcCCchHHHHHHhhhcC-
Q 007643 446 DALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSD- 523 (595)
Q Consensus 446 Dal~~~k~al~~g-vVpGGGa~e~~ls~~L~~~~~~~~~~~q~~~i~~~a~AL~~ip~~L~~NaG~d~~~vi~kl~~~~- 523 (595)
||+++++++++++ +|||||++||+++.+|++++++.++.+| +++++|++||+.||++|++|||+|+.+++.+|++.|
T Consensus 348 DAl~v~~~~~~~~~~vpGGGa~E~~ls~~l~~~~~~~~~~~~-~~~~~~a~al~~ip~~La~NaG~d~~~~l~~l~~~h~ 426 (480)
T cd03337 348 DAMAVARNIILNPKLVPGGGATEMAVSHALSEKAKSIEGVEQ-WPYKAVASALEVIPRTLAQNCGANVIRTLTELRAKHA 426 (480)
T ss_pred HHHHHHHHHhcCCCEEeCCCHHHHHHHHHHHHHhhcCCCHHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 9999999999996 9999999999999999998877777766 899999999999999999999999999999998642
Q ss_pred ---CCceeeecCCCccccccccCcccchHHHHHHHHHHHHHHHHHhchhHHhh
Q 007643 524 ---NHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVV 573 (595)
Q Consensus 524 ---~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~ 573 (595)
+.++|+|+.+|++.||++.|||||+.+|+++|++|+|+|++||+||++|.
T Consensus 427 ~~~~~~~Gid~~~g~i~d~~~~gV~dp~~vk~~~l~~A~e~a~~iL~id~ii~ 479 (480)
T cd03337 427 QGENSTWGIDGETGDIVDMKELGIWDPLAVKAQTYKTAIEAACMLLRIDDIVS 479 (480)
T ss_pred ccCCCeECeeccCCCcccchhccCeEcHHHHHHHHHHHHHHHHHHhhhhheec
Confidence 45799999999999999999999999999999999999999999999884
No 32
>TIGR02341 chap_CCT_beta T-complex protein 1, beta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT beta chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=5.8e-82 Score=701.06 Aligned_cols=454 Identities=23% Similarity=0.355 Sum_probs=396.5
Q ss_pred HHHHHHHHHHHHHHHHhhhhccCcCCCceeeecCC--CCcEEecChHHHhccccccCccchHHHHHHHHHHHhcccccCC
Q 007643 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKY--GAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGD 149 (595)
Q Consensus 72 ~~~~~~~~~~v~~la~~v~stlGP~G~~kmI~~~~--g~~~ITnDG~TIlk~l~l~hP~enigakLl~~~a~~qd~~~GD 149 (595)
++++..++.|+..++++|+|||||+||+|||+++. |+++|||||+||+++|+++||. |+|++++|++||+++||
T Consensus 13 ~~a~~~ni~a~~~i~~~vkttlGP~G~~KmI~~~~~~G~~~iTnDG~tIlk~l~i~hP~----akll~~~a~~qd~~~GD 88 (519)
T TIGR02341 13 ENARLSSFVGAIAIGDLVKSTLGPKGMDKILQSGSSESGIMVTNDGATILKSIGVDNPA----AKVLVDMSKVQDDEVGD 88 (519)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCcCceEEeccCCCCCeEEeccHHHHHHHccCcChH----HHHHHHHHHHhHhhhCC
Confidence 77999999999999999999999999999999985 9999999999999999999997 99999999999999999
Q ss_pred CcchHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHcccccCCc-----h-HHHHHHhhhcCC------hh
Q 007643 150 GTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED-----S-ELADVAAVSAGN------NY 217 (595)
Q Consensus 150 GTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~~-----~-~L~~va~ts~~~------~~ 217 (595)
||||+|||+++||+++.+++++|+||..|++||+.|.+.++++|+++++++++ . +|.++|+|+++. .+
T Consensus 89 GTTtvvvLa~~Ll~~a~~li~~gihp~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~~L~~ia~t~l~ski~~~~~~ 168 (519)
T TIGR02341 89 GTTSVTVLAAELLREAEKLVNQKIHPQTIISGYRRATKAAQEALKKSSIDNGSDKTKFRDDLLNIARTTLSSKILSQHKD 168 (519)
T ss_pred chhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhcccccCcccccHHHHHHHHHHHhhhhhhhhHHH
Confidence 99999999999999999999999999999999999999999999999999853 2 789999998764 37
Q ss_pred HHHHHHHHHHHhhccC---CcEEe--eCCCcccceeEEEeeeEEeecccCCccccCcccCcccccCeeEEEecccCCC--
Q 007643 218 EVGNMIAEAMSKVGRK---GVVTL--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITN-- 290 (595)
Q Consensus 218 ~ls~li~~Av~~v~~~---g~I~v--~~G~~~~ds~~li~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~~-- 290 (595)
.|++++++|+..+... ..|.+ .+|++++|+ ++++|+++++++.+ .|+++++||+|+++|+++..
T Consensus 169 ~~s~l~~~av~~i~~~~~~~~i~i~k~~G~s~~~s-~l~~G~v~~~~~~~--------~~~~~~~n~~Ili~~~~Le~~~ 239 (519)
T TIGR02341 169 HFAQLAVDAVLRLKGSGNLDAIQIIKKLGGSLNDS-YLDEGFLLEKKIGV--------NQPKRIENAKILIANTPMDTDK 239 (519)
T ss_pred HHHHHHHHHHHHhccCCChhheEEEEccCCCcccc-eEEeeEEEeccCCC--------CCceeeccccEEEEecCCCCCc
Confidence 8999999999998432 12443 489999999 89999999998643 25678999999999987542
Q ss_pred ------------HHHH-----------HHHHHHHHHcCCCEEEEeccccHHHHHHHHHHhhcccceeEEeeCCCcccchh
Q 007643 291 ------------ARDL-----------INVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKS 347 (595)
Q Consensus 291 ------------~~~i-----------~~~le~i~~~g~~lvIi~~~i~~~aL~~L~~n~~~g~~~i~av~~~~~~~~~~ 347 (595)
++++ ..+++.+++.|++++++++.|++.++++|..+ +|++|++++ +
T Consensus 240 ~~~~~~~~~~~~~~~~~~l~~~e~~~~~~~~~~I~~~g~~~v~~~~~I~~~~~~~l~~~------~I~~v~~~~-----~ 308 (519)
T TIGR02341 240 VKVFGSRVRVDSTAKVAELEAAEKEKMKEKVEKILKHNINCFINRQLIYNYPEQLFADA------GVMAIEHAD-----F 308 (519)
T ss_pred cccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEECCcCCHHHHHHHHHC------CcEEEecCC-----H
Confidence 3333 22467889999999999999999999988765 689998766 5
Q ss_pred hhHHHHHHHhCCeEeecCCCccccCCCCCCceeeeEEE---EecCeEEEEccCCCchhhhhHHHHHHHHHHhhchHHHHH
Q 007643 348 QYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVV---LTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYERE 424 (595)
Q Consensus 348 ~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~---i~~~~~~ii~~~~~~~~i~~r~~~lr~~l~~~~~~~~~e 424 (595)
.+|+|||++|||++++ +++++++++||+|+.|+ +++++++++.+|.+....+. .|| +++ +++.+
T Consensus 309 ~~l~~ia~~tGa~ii~-----~~~~~~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~TI---llr----G~t-~~~l~ 375 (519)
T TIGR02341 309 EGIERLALVTGGEIVS-----TFDHPELVKLGSCDLIEEIMIGEDKLLKFSGVKLGEACTI---VLR----GAT-QQILD 375 (519)
T ss_pred HHHHHHHHHhCCEEec-----ccccCCccccccCceEEEEEECCEEEEEEEcCCCCCEEEE---EEe----CCC-HHHHH
Confidence 6899999999999999 58888899999999886 56789999998865444321 243 333 33323
Q ss_pred HHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHcC-ccccchHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhHHHHH
Q 007643 425 KLNERIAKLSGGVAVIQLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKL 503 (595)
Q Consensus 425 ~L~ERi~~l~gg~a~i~~~i~Dal~~~k~al~~g-vVpGGGa~e~~ls~~L~~~~~~~~~~~q~~~i~~~a~AL~~ip~~ 503 (595)
++ | |+++||++++|++++++ +|||||++|++++++|++++++..+.+| +++++|++||+.||++
T Consensus 376 E~-e-------------r~i~Dal~~~~~~~~~~~vvpGGGa~e~~ls~~l~~~~~~~~~~~~-~~i~~~a~Ale~ip~~ 440 (519)
T TIGR02341 376 ES-E-------------RSLHDALCVLSQTVKESRTVLGGGCSEMLMSKAVAVEAQKVPGKEA-LAVEAFARALRQLPTI 440 (519)
T ss_pred HH-H-------------HHHHHHHHHHHHHHhCCCEEeCCCHHHHHHHHHHHHHhhcCCChHH-HHHHHHHHHHHHHHHH
Confidence 22 2 79999999999999996 9999999999999999998877666665 8999999999999999
Q ss_pred HHHhcCCchHHHHHHhhhc---CCCceeeecCCCccccccccCcccchHHHHHHHHHHHHHHHHHhchhHHhhccCC
Q 007643 504 IAKNAGVNGSVVSEKVLSS---DNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKE 577 (595)
Q Consensus 504 L~~NaG~d~~~vi~kl~~~---~~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~~ 577 (595)
||+|||+|+.+++.+|++. ++.++|||+.+|++.||++.|||||+.||+++|+.|+|+|++||+||++|+.+|+
T Consensus 441 La~NaG~d~~~~l~~l~~~h~~~~~~~Gid~~~g~i~d~~~~gI~dp~~vk~~~l~~A~e~a~~iL~id~ii~~~~~ 517 (519)
T TIGR02341 441 IADNAGFDSAELVAQLRAAHYNGNHTMGLDMEEGEIADMRKLGIIESYKVKRAVVSSAAEAAEVILRVDNIIKAAPR 517 (519)
T ss_pred HHHHCCCCHHHHHHHHHHHHHcCCCccceecCCCcccchhhccceEcHHHHHHHHHHHHHHHHHHHhHHHHHhcCCC
Confidence 9999999999999999764 3457999999999999999999999999999999999999999999999999774
No 33
>cd03341 TCP1_theta TCP-1 (CTT or eukaryotic type II) chaperonin family, theta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=1.3e-81 Score=691.67 Aligned_cols=437 Identities=22% Similarity=0.298 Sum_probs=384.2
Q ss_pred cHHHHHHHHHHHHHHHHhhhhccCcCCCceeeecCCCCcEEecChHHHhccccccCccchHHHHHHHHHHHhcccccCCC
Q 007643 71 DGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDG 150 (595)
Q Consensus 71 ~~~~~~~~~~~v~~la~~v~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~l~l~hP~enigakLl~~~a~~qd~~~GDG 150 (595)
.++++..|+.+|..|+++|++||||+||+|||++++|+++|||||+||+++|+++||+ ++|++++|++||+++|||
T Consensus 6 ~~~~~~~ni~a~~~l~~~v~ttlGP~G~~kmi~~~~g~~~iTnDG~tIlk~l~~~hP~----a~ll~~~a~~~~~~~GDG 81 (472)
T cd03341 6 LEEAVLRNIEACKELSQITRTSYGPNGMNKMVINHLEKLFVTSDAATILRELEVQHPA----AKLLVMASQMQEEEIGDG 81 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcCCCCCceEEEcCCCCEEEeCcHHHHHHhccccCHH----HHHHHHHHHHHhhhhCCC
Confidence 4789999999999999999999999999999999999999999999999999999999 999999999999999999
Q ss_pred cchHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHccccc-CCc---h-HHHHHHhhhc-----CChhHHH
Q 007643 151 TTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKE-VED---S-ELADVAAVSA-----GNNYEVG 220 (595)
Q Consensus 151 TTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~-v~~---~-~L~~va~ts~-----~~~~~ls 220 (595)
|||+|+|+++||+++.+++++|+||..|++||+.|.+.++++|++++++ +++ . .+.++++|++ +++++|+
T Consensus 82 TTt~vvL~~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~l~ 161 (472)
T cd03341 82 TNLVVVLAGELLEKAEELLRMGLHPSEIIEGYEKALKKALEILEELVVYKIEDLRNKEEVSKALKTAIASKQYGNEDFLS 161 (472)
T ss_pred hhhHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHhcccccchHHHHH
Confidence 9999999999999999999999999999999999999999999999866 533 2 6778888875 3478999
Q ss_pred HHHHHHHHhhccC--Cc-------EEeeCCCcccceeEEEeeeEEeecccCCccccCcccCcccccCeeEEEecccCCCH
Q 007643 221 NMIAEAMSKVGRK--GV-------VTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNA 291 (595)
Q Consensus 221 ~li~~Av~~v~~~--g~-------I~v~~G~~~~ds~~li~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~~~ 291 (595)
+++++|+.+++++ |. |.+.+|++++|| ++++|++|++.+. .++++++||+|+++++++..
T Consensus 162 ~l~~~a~~~~~~~~~~~~~~~~i~i~ki~Gg~~~ds-~lv~Giv~~~~~~---------~~~~~~~n~~Ili~~~~Le~- 230 (472)
T cd03341 162 PLVAEACISVLPENIGNFNVDNIRVVKILGGSLEDS-KVVRGMVFKREPE---------GSVKRVKKAKVAVFSCPFDI- 230 (472)
T ss_pred HHHHHHHHHHhhccCCcCChhHeEEEEecCCCcccc-eEEeeEEEccccC---------CCceeccCCcEEEEeccccC-
Confidence 9999999999875 42 334589999999 9999999986532 24478999999999999877
Q ss_pred HHHHHHHHHHHHcCCCEEEEeccccHHHHHHHHHHhhcccceeEEeeCCCcccchhhhHHHHHHHhCCeEeecCCCcccc
Q 007643 292 RDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALD 371 (595)
Q Consensus 292 ~~i~~~le~i~~~g~~lvIi~~~i~~~aL~~L~~n~~~g~~~i~av~~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~ 371 (595)
|+||||++++|+++++++|..+ +|+||++|+ +++|+|||++|||++++ +++
T Consensus 231 -------------g~~lvi~~~~I~d~al~~l~~~------~I~av~~~~-----~~~Le~Ia~~tGa~ii~-----~~~ 281 (472)
T cd03341 231 -------------GVNVIVAGGSVGDLALHYCNKY------GIMVIKINS-----KFELRRLCRTVGATPLP-----RLG 281 (472)
T ss_pred -------------CCeEEEECCCCCHHHHHHHHHC------CeEEEEeCC-----HHHHHHHHHHhCCEEec-----ccc
Confidence 8999999999999999986643 789999776 67899999999999998 588
Q ss_pred CCCCCCceeeeEEEEe---cCeEEEEccCCC-chhhhhHHHHHHHHHHhhchHHHHHHHHHHHHHhcCcHHHHHHHHHHH
Q 007643 372 KVGKEVLGNASKVVLT---KDTTTIVGDGST-QDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQLRVEDA 447 (595)
Q Consensus 372 ~~~~~~lG~~~~v~i~---~~~~~ii~~~~~-~~~i~~r~~~lr~~l~~~~~~~~~e~L~ERi~~l~gg~a~i~~~i~Da 447 (595)
++++++||+|++|++. +++++++.++.+ ....+ ..||| + ++++.++++ |+++||
T Consensus 282 ~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~~T---I~lrG----~-t~~~l~E~e--------------r~i~DA 339 (472)
T cd03341 282 APTPEEIGYCDSVYVEEIGDTKVVVFRQNKEDSKIAT---IVLRG----A-TQNILDDVE--------------RAIDDG 339 (472)
T ss_pred cCCHhHCCCceEEEEEEECCeeEEEEEccCCCCCeEE---EEEEC----C-CHHHHHHHH--------------HHHHHH
Confidence 8888999999999854 489999988765 33221 12432 3 333333322 799999
Q ss_pred HHHHHHHHHcC-ccccchHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhHHHHHHHHhcCCchHHHHHHhhhc---C
Q 007643 448 LNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSS---D 523 (595)
Q Consensus 448 l~~~k~al~~g-vVpGGGa~e~~ls~~L~~~~~~~~~~~q~~~i~~~a~AL~~ip~~L~~NaG~d~~~vi~kl~~~---~ 523 (595)
++++++++++| +|||||++|++++.+|++++++..+.+ ++++++|++||+.||++|++|||+|+.+++.+|+.. +
T Consensus 340 l~~~~~ai~~~~vVpGGG~~e~~ls~~l~~~~~~~~~~~-~~~~~~~a~al~~ip~~L~~NaG~d~~~~~~~l~~~h~~~ 418 (472)
T cd03341 340 VNVFKSLTKDGRFVPGAGATEIELAKKLKEYGEKTPGLE-QYAIKKFAEAFEVVPRTLAENAGLDATEVLSELYAAHQKG 418 (472)
T ss_pred HHHHHHHhcCCCEEeCcCHHHHHHHHHHHHHhhccCCHH-HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcc
Confidence 99999999999 999999999999999999877666655 589999999999999999999999999999999753 3
Q ss_pred CCceeeecCCC--ccccccccCcccchHHHHHHHHHHHHHHHHHhchhHHhhc
Q 007643 524 NHKYGYNAATG--NYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVE 574 (595)
Q Consensus 524 ~~~~Gid~~~g--~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~~ 574 (595)
+.++|||+.+| ++.||++.|||||+.||+++|+.|+|+|++|||||++|..
T Consensus 419 ~~~~Gid~~~g~~~~~d~~~~gI~dp~~vk~~~l~~A~e~a~~iL~id~ii~~ 471 (472)
T cd03341 419 NKSAGVDIESGDEGTKDAKEAGIFDHLATKKWAIKLATEAAVTVLRVDQIIMA 471 (472)
T ss_pred CCeeeeeccCCCCCccChhhccceecHHHHHHHHHHHHHHHHHHhhhcceeec
Confidence 56899999999 9999999999999999999999999999999999999864
No 34
>cd00309 chaperonin_type_I_II chaperonin families, type I and type II. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings, each composed of 7-9 subunits. There are 2 main chaperonin groups. The symmetry of type I is seven-fold and they are found in eubacteria (GroEL) and in organelles of eubacterial descent (hsp60 and RBP). The symmetry of type II is eight- or nine-fold and they are found in archea (thermosome), thermophilic bacteria (TF55) and in the eukaryotic cytosol (CTT). Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis.
Probab=100.00 E-value=3.1e-81 Score=688.75 Aligned_cols=439 Identities=37% Similarity=0.532 Sum_probs=391.1
Q ss_pred ccccCCcHHHHHHHHHHHHHHHHhhhhccCcCCCceeeecCCCCcEEecChHHHhccccccCccchHHHHHHHHHHHhcc
Q 007643 65 DLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTN 144 (595)
Q Consensus 65 ~~~f~~~~~~~~~~~~~v~~la~~v~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~l~l~hP~enigakLl~~~a~~qd 144 (595)
+..++ ++++..++++|..+++++++||||+||+|||++++|+++|||||+||+|+|+++||. ++|+++++++||
T Consensus 2 ~~~~~--~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~~g~~~iTnDG~tIlk~i~~~hp~----a~ll~~~~~~~~ 75 (464)
T cd00309 2 EREFG--EEARLSNINAAKALADAVKTTLGPKGMDKMLVDSLGDPTITNDGATILKEIEVEHPA----AKLLVEVAKSQD 75 (464)
T ss_pred ccccH--HHHHHHHHHHHHHHHHHHhcccCCCcCcEEEEcCCCCeEEEccHHHHHHhccCcCHH----HHHHHHHHHHHH
Confidence 35566 899999999999999999999999999999999999999999999999999999998 999999999999
Q ss_pred cccCCCcchHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHccccc--CCch-HHHHHHhhhcC------C
Q 007643 145 DLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKE--VEDS-ELADVAAVSAG------N 215 (595)
Q Consensus 145 ~~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~--v~~~-~L~~va~ts~~------~ 215 (595)
+++||||||+++|+++||+++.+++++|+||..|++||+.|++.++++|++++++ +.+. .|.++|+|+++ +
T Consensus 76 ~~~GDGTtt~viL~~~ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~~~~l~~ia~tsl~sK~~~~~ 155 (464)
T cd00309 76 DEVGDGTTTVVVLAGELLKEAEKLLAAGIHPTEIIRGYEKAVEKALEILKEIAVPIDVEDREELLKVATTSLNSKLVSGG 155 (464)
T ss_pred hHhCCchhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCccCCCCHHHHHHHhHhcccccccccc
Confidence 9999999999999999999999999999999999999999999999999999998 4445 89999999998 6
Q ss_pred hhHHHHHHHHHHHhhcc------CCcEEe--eCCCcccceeEEEeeeEEeecccCCccccCcccCcccccCeeEEEeccc
Q 007643 216 NYEVGNMIAEAMSKVGR------KGVVTL--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKK 287 (595)
Q Consensus 216 ~~~ls~li~~Av~~v~~------~g~I~v--~~G~~~~ds~~li~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~ 287 (595)
+++|++++++|+.++++ .+.|++ .+|++++|| ++++|++|+++|.+|+ |+++++||+|++++++
T Consensus 156 ~~~l~~l~~~Ai~~v~~~~~~~~~~~I~i~k~~gg~~~ds-~li~Gi~~~~~~~~~~-------m~~~~~n~~Ili~~~~ 227 (464)
T cd00309 156 DDFLGELVVDAVLKVGKENGDVDLGVIRVEKKKGGSLEDS-ELVVGMVFDKGYLSPY-------MPKRLENAKILLLDCK 227 (464)
T ss_pred hHHHHHHHHHHHHHhccccCccccceEEEEecCCCCcccc-eeeeeEEEecCCCCCC-------CceeecCceEEEEecC
Confidence 89999999999999987 455554 589999999 8999999999999987 4678999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeccccHHHHHHHHHHhhcccceeEEeeCCCcccchhhhHHHHHHHhCCeEeecCCC
Q 007643 288 ITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVG 367 (595)
Q Consensus 288 i~~~~~i~~~le~i~~~g~~lvIi~~~i~~~aL~~L~~n~~~g~~~i~av~~~~~~~~~~~~L~~ia~~tGa~ii~~~~~ 367 (595)
+.. |||+.++|+++++++|..+ +|++|+ ++++++|+|||++|||++++
T Consensus 228 Le~-----------------lIi~~~~I~~~al~~L~~~------~I~~v~-----~~~~~~L~~Ia~~tGa~ii~---- 275 (464)
T cd00309 228 LEY-----------------VVIAEKGIDDEALHYLAKL------GIMAVR-----RVRKEDLERIAKATGATIVS---- 275 (464)
T ss_pred cce-----------------EEecCCCcCHHHHHHHHHC------CeEEEE-----eCCHHHHHHHHHHhCCEEec----
Confidence 887 7777788999999998874 688887 46789999999999999998
Q ss_pred ccccCCCCCCceeeeEEEE---ecCeEEEEccCCCchhhhhHHHHHHHHHHhhchHHHHHHHHHHHHHhcCcHHHHHHHH
Q 007643 368 LALDKVGKEVLGNASKVVL---TKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQLRV 444 (595)
Q Consensus 368 ~~l~~~~~~~lG~~~~v~i---~~~~~~ii~~~~~~~~i~~r~~~lr~~l~~~~~~~~~e~L~ERi~~l~gg~a~i~~~i 444 (595)
++++++++.+|+|+.|++ ++++++++.++......+ ..|| +++... |+|+ ++++
T Consensus 276 -~~~~~~~~~lG~~~~v~~~~~g~~~~~~~~~~~~~~~~T---Illr----G~t~~~----l~e~-----------~r~i 332 (464)
T cd00309 276 -RLEDLTPEDLGTAGLVEETKIGDEKYTFIEGCKGGKVAT---ILLR----GATEVE----LDEA-----------ERSL 332 (464)
T ss_pred -ccccCCcccCccccEEEEEEEcCeeEEEEEecCCCCEEE---EEEe----CCcHHH----HHHH-----------HHHH
Confidence 588888999999999974 467888888775543322 1243 333322 2231 2799
Q ss_pred HHHHHHHHHHHHcC-ccccchHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhHHHHHHHHhcCCchHHHHHHhhhcC
Q 007643 445 EDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSD 523 (595)
Q Consensus 445 ~Dal~~~k~al~~g-vVpGGGa~e~~ls~~L~~~~~~~~~~~q~~~i~~~a~AL~~ip~~L~~NaG~d~~~vi~kl~~~~ 523 (595)
+||+++++++++++ +|||||++||+++++|++++.+.++.+| +++++|++||+.||++|++|||+|+.+++.+|+..+
T Consensus 333 ~dal~~~~~~~~~~~~vpGGGa~E~~ls~~L~~~~~~~~~~~~-~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~ 411 (464)
T cd00309 333 HDALCAVRAAVEDGGIVPGGGAAEIELSKALEELAKTLPGKEQ-LGIEAFADALEVIPRTLAENAGLDPIEVVTKLRAKH 411 (464)
T ss_pred HHHHHHHHHHHHcCCcccCCcHHHHHHHHHHHHHhcccchHHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHh
Confidence 99999999999995 9999999999999999999876666554 899999999999999999999999999999998643
Q ss_pred ---CCceeeecCCCccccccccCcccchHHHHHHHHHHHHHHHHHhchhHHhh
Q 007643 524 ---NHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVV 573 (595)
Q Consensus 524 ---~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~ 573 (595)
..++|+|..+|++.||++.|||||+.||+++|+.|+|+|++||+||++|+
T Consensus 412 ~~~~~~~g~d~~~~~~~d~~~~gI~dp~~vk~~~l~~A~e~a~~iL~id~ii~ 464 (464)
T cd00309 412 AEGGGNAGGDVETGEIVDMKEAGIIDPLKVKRQALKSATEAASLILTIDDIIV 464 (464)
T ss_pred hccCCCeeEECCCCcEeehhhccCeecHHHHHHHHHHHHHHHHHHHhHHHHhC
Confidence 34789999999999999999999999999999999999999999999984
No 35
>PF00118 Cpn60_TCP1: TCP-1/cpn60 chaperonin family Chaperonins cpn60 signature Chaperonins TCP-1 signatures 60 kd chaperonin signature; InterPro: IPR002423 Partially folded polypeptide chains, either newly made by ribosomes or emerging from mature proteins unfolded by stress, run the risk of aggregating with one another to the detriment of the organism. Folding of newly synthesised polypeptides in the crowded cellular environment requires the assistance of molecular chaperone proteins, such as the large bacterial chaperonins GroEL and GroES. GroEL and GroES prevent aggregation by encapsulating individual chains within the so-called 'Anfinsen cage' provided by the GroEL-GroES complex, where they can fold in isolation from one another []. GroEL consists of two heptameric rings of identical ATPase subunits stacked back to back, containing a cage in each ring. Each subunit consists of three domains. The equatorial domain contains the nucleotide binding site and is connected by a flexible intermediate domain with the apical domain. The latter presents several hydrophobic amino-acid side chains at the top of the ring, orientated towards the cavity of the cage. These side chains are involved in binding either a partially folded polypeptide chain or a single molecule of GroES. The assembly of proteins has been thought to be the sole result of properties inherent in the primary sequence of polypeptides themselves. In some cases, however, structural information from other protein molecules is required for correct folding and subsequent assembly into oligomers []. These 'helper' molecules are referred to as molecular chaperones, a subfamily of which are the chaperonins [], which include 10 kDa and 60 kDa proteins. These are found in abundance in prokaryotes, chloroplasts and mitochondria. They are required for normal cell growth (as demonstrated by the fact that no temperature sensitive mutants for the chaperonin genes can be found in the temperature range 20 to 43 degrees centigrade []), and are stress-induced, acting to stabilise or protect disassembled polypeptides under heat-shock conditions []. The 10 kDa chaperonin (cpn10 - or groES in bacteria) exists as a ring-shaped oligomer of between 6 to 8 identical subunits, whereas the 60 kDa chaperonin (cpn60 - or groEL in bacteria) forms a structure comprising 2 stacked rings, each ring containing 7 identical subunits []. These ring structures assemble by self-stimulation in the presence of Mg2+-ATP. The cpn10 and cpn60 oligomers also require Mg2+-ATP in order to interact to form a functional complex, although the mechanism of this interaction is as yet unknown []. This chaperonin complex is essential for the correct folding and assembly of polypeptides into oligomeric structures, of which the chaperonins themselves are not a part []. The binding of cpn10 to cpn60 inhibits the weak ATPase activity of cpn60. The 60 kDa form of chaperonin is the immunodominant antigen of patients with Legionnaire's disease [], and is thought to play a role in the protection of the Legionella bacteria from oxygen radicals within macrophages. This hypothesis is based on the finding that the cpn60 gene is upregulated in response to hydrogen peroxide, a source of oxygen radicals. Cpn60 has also been found to display strong antigenicity in many bacterial species [], and has the potential for inducing immune protection against unrelated bacterial infections. The RuBisCO subunit binding protein (which has been implicated in the assembly of RuBisCO) and cpn60 have been found to be evolutionary homologues, the RuBisCO subunit binding protein having the C-terminal Gly-Gly-Met repeat found in all bacterial cpn60 sequences. Although the precise function of this repeat is unknown, it is thought to be important as it is also found in 70 kDa heat-shock proteins []. The crystal structure of Escherichia coli GroEL has been resolved to 2.8A []. The TCP-1 family of proteins act as molecular chaperones for tubulin, actin and probably some other proteins. They are weakly, but significantly, related to the cpn60/groEL chaperonin family. ; GO: 0005524 ATP binding, 0044267 cellular protein metabolic process; PDB: 3IZH_B 3IZI_I 3LOS_I 3IYF_H 3KFK_C 3KFE_E 3RUV_C 3IZK_L 3J02_B 3RUQ_A ....
Probab=100.00 E-value=2.1e-75 Score=645.53 Aligned_cols=441 Identities=29% Similarity=0.467 Sum_probs=385.8
Q ss_pred HHHhhhhccCcCCCceeeecCCCCcEEecChHHHhccccccCccchHHHHHHHHHHHhcccccCCCcchHHHHHHHHHHH
Q 007643 85 LADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAE 164 (595)
Q Consensus 85 la~~v~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~l~l~hP~enigakLl~~~a~~qd~~~GDGTTt~vvLa~~Ll~~ 164 (595)
|+++|++||||+||+|||++..|+++|||||+||+++|+++||+ ++|+++++++|++++||||||+|+|+++||++
T Consensus 1 l~~~v~sslGP~G~~kli~~~~g~~~iTndg~tIl~~l~~~~P~----~~ll~~~~~~~~~~~GDGtts~vlL~~~ll~~ 76 (485)
T PF00118_consen 1 LADIVKSSLGPKGRDKLIVNDSGKIIITNDGATILKSLKINHPI----AKLLVEASKSQDEEVGDGTTSVVLLACELLRN 76 (485)
T ss_dssp HHHHHGCCSSTTS-EEEEEESSSSEEEESSHHHHHHHSTBSSHH----HHHHHHHHHHHHHHTSSHHHHHHHHHHHHHHH
T ss_pred ChhhcccCcCCCCCeEEEEcCCCCeEEEechhHHHHHhhhccch----hhhHHHhHHHHHhhhccccceeeecccchhhh
Confidence 68999999999999999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred HHHHHhcCCChHHHHHHHHHHHHHHHHHHHcccccCCch--HHHHHHhhhcCCh------hHHHHHHHHHHHhhccC---
Q 007643 165 GVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS--ELADVAAVSAGNN------YEVGNMIAEAMSKVGRK--- 233 (595)
Q Consensus 165 ~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~--~L~~va~ts~~~~------~~ls~li~~Av~~v~~~--- 233 (595)
+.+++++|+||..|++||+.+.+.+++.|++++++++.. .|.++|+|+++++ +.|++++++|+..+..+
T Consensus 77 ~~~li~~gi~p~~I~~~~~~~~~~~~~~l~~~s~~~~~~~~~l~~i~~t~l~~k~~~~~~~~l~~li~~a~~~~~~~~~~ 156 (485)
T PF00118_consen 77 ALKLIKKGIHPQEIIRGLQEALKIILEYLEKISIPINNDDESLLNIAKTSLNSKISSSWSDHLSKLIVDAIKSIKSNFDL 156 (485)
T ss_dssp HHHHHHTTS-HHHHHHHHHHHHHHHHHHHHHHSEESTSTSHHHHHHHHHHHTTSCGGGCHHHHHHHHHHHHHHHTTTHHG
T ss_pred hhhhhhccccccchhhhhhhhhhhhhhhhhhhhccccccchhhhhhhcccccccccccchhhhhhhHHHHHHhhcccccc
Confidence 999999999999999999999999999999999888754 8999999999877 89999999999443211
Q ss_pred C--cEEeeCCCcccceeEEEeeeEEeecccCCccccCcccCcccccCeeEEEecccCCCHHH------------------
Q 007643 234 G--VVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARD------------------ 293 (595)
Q Consensus 234 g--~I~v~~G~~~~ds~~li~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~~~~~------------------ 293 (595)
+ .+....|++++|| ++++|++|+++|.++ +|++++++|+|+++++++...+.
T Consensus 157 ~~i~i~~i~g~~~~dS-~li~Giv~~~~~~~~-------~~~~~~~~~~Ill~~~~L~~~~~~~~~~~~~~~~~~~~~~~ 228 (485)
T PF00118_consen 157 DNIKIIKIPGGSISDS-ELINGIVLDKGFSSP-------NMPKKIENPKILLLNCPLEYSKSFKSEIRITSPEQLDELSK 228 (485)
T ss_dssp GGEEEEEEESSSSGGE-EEESEEEESSSBSST-------TSBSEEESEEEEEESSEBSSCCHSTEEEEESSTHHHHHHHH
T ss_pred cchhhhhhcccccccc-ccccceeeecccccc-------ccccccccceEEeeecccccccccccccchhhHHHHHHHHh
Confidence 1 1334688888999 899999999999886 47778899999999998766655
Q ss_pred -----HHHHHHHHHHcCCCEEEEeccccHHHHHHHHHHhhcccceeEEeeCCCcccchhhhHHHHHHHhCCeEeecCCCc
Q 007643 294 -----LINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGL 368 (595)
Q Consensus 294 -----i~~~le~i~~~g~~lvIi~~~i~~~aL~~L~~n~~~g~~~i~av~~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~ 368 (595)
+.++++.+.+.|+||||++++|++.++++|..++ |.+++ ++++++|++|+.+||+++++
T Consensus 229 ~e~~~l~~~~~~i~~~~~~lIi~~~~i~~~~l~~l~~~~------I~~i~-----~v~~~~l~~i~~~tg~~ii~----- 292 (485)
T PF00118_consen 229 QEKKYLKKILEKIINLGVNLIISQKSIDDEALQYLNKNG------ILVIR-----RVSKEDLERIARATGASIIS----- 292 (485)
T ss_dssp HHHHHHHHHHHHHHTTTSSEEEESSEBTHHHHHHHHHCT------HEEES-----SEHHHHHHHHHHHHTSBEBS-----
T ss_pred hhhhhhccccceEeeeccceeeeecccccccchhhhhhh------hhccc-----cchHHHHHhhhcccCCcEec-----
Confidence 7889999999999999999999999999998874 45444 77899999999999999999
Q ss_pred cccCCCCCCceeeeEE---EEecCeEEEEcc--CCCchhhhhHHHHHHHHHHhhchHHHHHHHHHHHHHhcCcHHHHHHH
Q 007643 369 ALDKVGKEVLGNASKV---VLTKDTTTIVGD--GSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQLR 443 (595)
Q Consensus 369 ~l~~~~~~~lG~~~~v---~i~~~~~~ii~~--~~~~~~i~~r~~~lr~~l~~~~~~~~~e~L~ERi~~l~gg~a~i~~~ 443 (595)
++++++++.+|+|+.+ +++++.++++.+ +......+. .| .++ ++.+.+.. +++
T Consensus 293 ~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~~~~~~Ti---ll----~g~-t~~~l~e~--------------~~~ 350 (485)
T PF00118_consen 293 SLDDLSDEDLGFCKSVEEREIGNKKYIFIEGIGCLSSKICTI---LL----RGP-TEFELEER--------------ERS 350 (485)
T ss_dssp SCGGSTGGGSEEEEEEEEEEETSSEEEEEEEHSESSSSEEEE---EE----EES-SHHHHHHH--------------HHH
T ss_pred ccccccchhhhhhhhhhhcccccccccccccccccccCceEE---Ee----ccc-cchhHHHH--------------HHH
Confidence 5788888889999999 578999999883 433333221 22 232 33332322 279
Q ss_pred HHHHHHHHHHHHHcC-ccccchHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhHHHHHHHHhcCCchHHHHHHhhh-
Q 007643 444 VEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLS- 521 (595)
Q Consensus 444 i~Dal~~~k~al~~g-vVpGGGa~e~~ls~~L~~~~~~~~~~~q~~~i~~~a~AL~~ip~~L~~NaG~d~~~vi~kl~~- 521 (595)
++||+++++++++++ +|||||++|++|+++|++++.+.++.+ ++++++|++||+.||++|++|||+|+.+++++|+.
T Consensus 351 i~dal~~~~~~~~~~~vvpGGG~~e~~l~~~L~~~~~~~~~~~-~~~~~~~a~aL~~ip~~L~~NaG~~~~~~~~~l~~~ 429 (485)
T PF00118_consen 351 IHDALKVLRSALKDGGVVPGGGATELHLSKALRKYAKSLSGKE-QLAIEAFADALESIPKTLAQNAGLDSSEVISKLKSF 429 (485)
T ss_dssp HHHHHHHHHHHHHSSEEEETTTHHHHHHHHHHHHHHHCSSSHH-HHHHHHHHHHTTHHHHHHHHHTTSTHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCceeecCcchhhhhhhhHHHhhhcccCch-hhhHHHHHHHHHHhhhhhhhccCCCceeeehhhHhh
Confidence 999999999999987 999999999999999999988766654 48999999999999999999999999999999987
Q ss_pred -cCCCceeeecCCCccccccccCcccchHHHHHHHHHHHHHHHHHhchhHHhhccC
Q 007643 522 -SDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIK 576 (595)
Q Consensus 522 -~~~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~ 576 (595)
+.++++|||+.+|++.||++.|||||+.+|+++|+.|+|+|++||+||++|..+|
T Consensus 430 h~~~~~~g~d~~~~~i~~~~~~gi~dp~~~k~~~l~~A~~~a~~iL~id~iI~~~~ 485 (485)
T PF00118_consen 430 HNNGNNYGIDLDTGEIVDMKEAGILDPLLVKISALKSAVEIASLILRIDEIIMAKP 485 (485)
T ss_dssp HHSTTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEESS
T ss_pred hccccccCcCccCCceeccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 3456999999999999999999999999999999999999999999999998865
No 36
>KOG0358 consensus Chaperonin complex component, TCP-1 delta subunit (CCT4) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=7.8e-74 Score=577.51 Aligned_cols=453 Identities=23% Similarity=0.339 Sum_probs=388.0
Q ss_pred HHHHHHHHHHHHHHHHhhhhccCcCCCceeeecCCCCcEEecChHHHhccccccCccchHHHHHHHHHHHhcccccCCCc
Q 007643 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (595)
Q Consensus 72 ~~~~~~~~~~v~~la~~v~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~l~l~hP~enigakLl~~~a~~qd~~~GDGT 151 (595)
++.|.+++.+.+.++++++|||||+||||||....|+++|||||+||||.|++-||+ |+|+++++..||.++||||
T Consensus 25 ~~vR~sni~Aa~avadairTSLGPkGmDKMIq~~~gev~iTNDGaTILk~m~vlhP~----akmLvelS~aQD~eaGDGT 100 (534)
T KOG0358|consen 25 EQVRFSNIQAARAVADAIRTSLGPKGMDKMIQTGKGEVIITNDGATILKQMNVLHPA----AKMLVELSAAQDSEAGDGT 100 (534)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCccchhhHhhcCCCcEEEecChHHHHHHHhhhChH----HHHHHHhhhhccccccCCc
Confidence 779999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHcccccCC--ch-HHHHHHhhhcCC------hhHHHHH
Q 007643 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE--DS-ELADVAAVSAGN------NYEVGNM 222 (595)
Q Consensus 152 Tt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~--~~-~L~~va~ts~~~------~~~ls~l 222 (595)
||+|+|+++||+.+.+|+++|+||+.|...|+.|.+..+++|.+++.|++ +. .|.+-|+||+|+ ...++.|
T Consensus 101 TsVVilaGaLL~~~~~LL~kgiHPtvIsdsfq~a~~~~v~il~~m~~~velsdre~Li~~atTsLnSKvvSq~s~llapm 180 (534)
T KOG0358|consen 101 TSVVILAGALLEAAEKLLQKGIHPTVISDSFQSAAKKAVDILDEMSVPVELSDRESLIKSATTSLNSKVVSQYSSLLAPM 180 (534)
T ss_pred eEEEEehhhHHHHHHHHHhcCCCchhhhHHHHHHHHHHHHHHHhcCCCcccCcHHHHHHHHHhHhhHHHHHhhccccchH
Confidence 99999999999999999999999999999999999999999999998876 44 688889998764 5778999
Q ss_pred HHHHHHhhcc-CC-------cEE--eeCCCcccceeEEEeeeEEeecccCCccccCcccCcccccCeeEEEeccc-----
Q 007643 223 IAEAMSKVGR-KG-------VVT--LEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKK----- 287 (595)
Q Consensus 223 i~~Av~~v~~-~g-------~I~--v~~G~~~~ds~~li~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~----- 287 (595)
.++|+.++-. .. .|+ ++.|++++|+ ++++|++|++...... .|..+|+++|-++.+.
T Consensus 181 AVdAV~kv~dp~~~~nvdlkdIkivkklGgtvdDt-e~i~glvl~~~~~~~~-------gptriekAkIglIQF~iS~PK 252 (534)
T KOG0358|consen 181 AVDAVLKVIDPENATNVDLKDIKIVKKLGGTVDDT-ELIKGLVLTQKASKSA-------GPTRIEKAKIGLIQFQISPPK 252 (534)
T ss_pred HHHHHHhccCcccccccchhhhhhHHhhCCccchh-hhhcceEEeeecccCC-------CcchhhhceeeEEEEEecCCC
Confidence 9999999843 21 133 3699999999 9999999998754321 3556788888777653
Q ss_pred --------CCCHH-----------HHHHHHHHHHHcCCCEEEEeccccHHHHHHHHHHhhcccceeEEeeCCCcccchhh
Q 007643 288 --------ITNAR-----------DLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQ 348 (595)
Q Consensus 288 --------i~~~~-----------~i~~~le~i~~~g~~lvIi~~~i~~~aL~~L~~n~~~g~~~i~av~~~~~~~~~~~ 348 (595)
+++.. .++++++++++.|.|+++++++|-.++++-|..|.+. .++|++|| ++.++
T Consensus 253 tdmen~iiv~DyaqMdrilkeER~YiL~mcKkIKk~gcnvLliQKSILRdavsDLAlHfL~-klkimvik-----dieRe 326 (534)
T KOG0358|consen 253 TDMENQIIVNDYAQMDRILKEERQYILNMCKKIKKAGCNVLLIQKSILRDAVSDLALHFLA-KLKIMVIK-----DIERE 326 (534)
T ss_pred CCcccceEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEeHHHHHHHHHHHHHHHHH-hCcEEEEc-----cccHh
Confidence 23332 3567888999999999999999999999988887774 46999998 67789
Q ss_pred hHHHHHHHhCCeEeecCCCccccCCCCCCceeeeEEEE----ecCeEEEEccCCCc-hhhhhHHHHHHH----HHHhhch
Q 007643 349 YLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL----TKDTTTIVGDGSTQ-DAVSKRVAQIRT----LIENAEQ 419 (595)
Q Consensus 349 ~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i----~~~~~~ii~~~~~~-~~i~~r~~~lr~----~l~~~~~ 419 (595)
+++.+|+.+|.+++. +++.++++.||+++.++. ++.+++-+.+..+. ..++ .++|| .++++
T Consensus 327 diefick~l~c~Pia-----~id~f~~d~Lg~adlveE~~~~G~gkivk~tg~~n~g~tvs---il~RGsn~lvleEa-- 396 (534)
T KOG0358|consen 327 DIEFICKTLGCKPIA-----DIDHFTADKLGSADLVEETDSSGEGKIVKITGIQNAGRTVS---ILLRGSNKLVLEEA-- 396 (534)
T ss_pred hHHHHHhhcCCeecc-----hhhhcChhhcCcchhhhhcccCCCccEEEEEEeecCCCceE---EEEecCchhhhHHH--
Confidence 999999999999999 689999999999988752 23233333332221 0110 01111 02332
Q ss_pred HHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHcC-ccccchHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHh
Q 007643 420 DYEREKLNERIAKLSGGVAVIQLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALC 498 (595)
Q Consensus 420 ~~~~e~L~ERi~~l~gg~a~i~~~i~Dal~~~k~al~~g-vVpGGGa~e~~ls~~L~~~~~~~~~~~q~~~i~~~a~AL~ 498 (595)
| |++|||||++|+.++.. ++||||+.||+++..|.+++++..+.+. +.+++|++|||
T Consensus 397 --------e-------------RSlhDALCVirCLvk~r~li~GGGapEieia~~L~~~a~t~eG~~~-yc~rafA~AlE 454 (534)
T KOG0358|consen 397 --------E-------------RSLHDALCVIRCLVKKRALIAGGGAPEIEIALRLSALARTLEGVEA-YCWRAFADALE 454 (534)
T ss_pred --------h-------------hhhhhhhHHHHhhhhccceecCCCCcchHHHHHHHHHHhhhccchh-HHHHHHHHHHh
Confidence 2 79999999999999997 9999999999999999999999888876 78999999999
Q ss_pred HHHHHHHHhcCCchHHHHHHhhhc---CCCceeeecCCCccccccccCcccchHHHHHHHHHHHHHHHHHhchhHHhhc
Q 007643 499 YPLKLIAKNAGVNGSVVSEKVLSS---DNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVE 574 (595)
Q Consensus 499 ~ip~~L~~NaG~d~~~vi~kl~~~---~~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~~ 574 (595)
.||.+||+|||++|..++.+||+. ++.++|+|+..|.+.||++..|+.|+.|-..+++.|+|++.+||+||+|+..
T Consensus 455 vIP~tLAeNAGLnpI~~VtELRn~haqge~~aGInVRkg~~tni~ee~VvQPllVs~SaitlA~Etvr~ILKIDDIv~a 533 (534)
T KOG0358|consen 455 VIPYTLAENAGLNPIATVTELRNRHAQGEKNAGINVRKGGITNILEENVVQPLLVSISAITLATETVRSILKIDDIVNA 533 (534)
T ss_pred cccHhHHhhCCCChhhHHHHHHHHHhcCCcccceeeecccchhhHHHhcccceeeeHHHHHHHHHHHHHHhhhhhhccc
Confidence 999999999999999999999864 4679999999999999999999999999999999999999999999999864
No 37
>KOG0363 consensus Chaperonin complex component, TCP-1 beta subunit (CCT2) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.4e-73 Score=570.40 Aligned_cols=457 Identities=23% Similarity=0.350 Sum_probs=396.1
Q ss_pred HHHHHHHHHHHHHHHHhhhhccCcCCCceeeecC--CCCcEEecChHHHhccccccCccchHHHHHHHHHHHhcccccCC
Q 007643 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESK--YGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGD 149 (595)
Q Consensus 72 ~~~~~~~~~~v~~la~~v~stlGP~G~~kmI~~~--~g~~~ITnDG~TIlk~l~l~hP~enigakLl~~~a~~qd~~~GD 149 (595)
+.+|...+.|...+.|+|+|||||+|||||+.+. .|.+.+||||+||||++.+++|+ ||++++.++-||+|+||
T Consensus 17 e~ArlssfvGaiaigDlvKsTLGPKGMdKiL~s~~~~~~v~VTNDGAtILksi~vDnpa----AkvLv~~S~vQD~EvGD 92 (527)
T KOG0363|consen 17 ENARLSSFVGAIAIGDLVKSTLGPKGMDKILQSTGRAGTVMVTNDGATILKSIGVDNPA----AKVLVDISKVQDDEVGD 92 (527)
T ss_pred hhHHHHHHHHHHHHHHHHHhccCcchHHHHHhccCCCCceEEecchHHHHHhcCCCCch----hhheeccccccccccCC
Confidence 7899999999999999999999999999999853 56799999999999999999999 99999999999999999
Q ss_pred CcchHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHcccccCCch------HHHHHHhhhcC------Chh
Q 007643 150 GTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS------ELADVAAVSAG------NNY 217 (595)
Q Consensus 150 GTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~------~L~~va~ts~~------~~~ 217 (595)
|||||+||+++||+|+.+++++.+||+.|+.||+.|...+++.|.+.++...+. +|.++|+|.+. .++
T Consensus 93 GTTSV~vlaaeLlreAeklv~~kiHPq~Ii~GyR~A~~~a~eaL~~~s~dns~~~~kfr~DLl~iarTTL~SKiLsq~ke 172 (527)
T KOG0363|consen 93 GTTSVTVLAAELLREAEKLVNQKIHPQTIISGYRMATAAALEALTKSSIDNSSDKEKFREDLLKIARTTLSSKILSQDKE 172 (527)
T ss_pred CceehHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHhhhhccCchHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 999999999999999999999999999999999999999999999988765421 79999998764 369
Q ss_pred HHHHHHHHHHHhhccCC-----cEEeeCCCcccceeEEEeeeEEeecccCCccccCcccCcccccCeeEEEeccc-----
Q 007643 218 EVGNMIAEAMSKVGRKG-----VVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKK----- 287 (595)
Q Consensus 218 ~ls~li~~Av~~v~~~g-----~I~v~~G~~~~ds~~li~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~----- 287 (595)
+|++|+++|+.++.-.+ .|.++.|++++|| .+-+|+.+++.+-. +.|+.++||+||+-+.+
T Consensus 173 hFaelavdAV~rLkGs~nL~~IqIIK~~Gg~l~dS-fLDeGFlL~K~igv--------~qpkriena~iLIANT~mDtDK 243 (527)
T KOG0363|consen 173 HFAELAVDAVLRLKGSTNLEAIQIIKKLGGKLEDS-FLDEGFLLDKKIGV--------NQPKRIENAKILIANTPMDTDK 243 (527)
T ss_pred HHHHHHHHHHHHhcCCCCccceeeehhcCCccccc-cccccceeccccCC--------CCcccccccceEEecCCCcccc
Confidence 99999999999986543 2556799999999 78999999987543 35778999999998754
Q ss_pred ---------CCCHH-----------HHHHHHHHHHHcCCCEEEEeccccHHHHHHHHHHhhcccceeEEeeCCCcccchh
Q 007643 288 ---------ITNAR-----------DLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKS 347 (595)
Q Consensus 288 ---------i~~~~-----------~i~~~le~i~~~g~~lvIi~~~i~~~aL~~L~~n~~~g~~~i~av~~~~~~~~~~ 347 (595)
+.+.. .+...++++.+.|+|+.|-..-|.++..++|... +|++|.. ..-
T Consensus 244 vKvfGarvrVds~~klaelE~AEkeKmK~KV~kI~~hgiN~FiNRQLiYnyPeqLf~da------gi~aIEH-----ADF 312 (527)
T KOG0363|consen 244 VKVFGARVRVDSTAKLAELEKAEKEKMKEKVEKILKHGINVFINRQLIYNYPEQLFADA------GIMAIEH-----ADF 312 (527)
T ss_pred eeeecceEeecchhHHHHHHHHHHHHHHHHHHHHHhcCCcEEeehhHhhcCHHHHHhhc------Ccceeec-----ccc
Confidence 22221 3456789999999999999888888888877654 5666653 334
Q ss_pred hhHHHHHHHhCCeEeecCCCccccCCCCCCceeeeEEE---EecCeEEEEccCCCchhhhhHHHHHHHHHHhhchHHHHH
Q 007643 348 QYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVV---LTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYERE 424 (595)
Q Consensus 348 ~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~---i~~~~~~ii~~~~~~~~i~~r~~~lr~~l~~~~~~~~~e 424 (595)
+-+||++.+|||.+.+ +|++++...||+|+.++ ++++++.-|.|+.--++.+ ..|| +++.+..+|
T Consensus 313 dGiERLalvtGGeI~S-----TFd~p~~~klG~C~~IeeimiGed~li~FSGv~~GeAct---IVlr----Gat~q~LDE 380 (527)
T KOG0363|consen 313 DGIERLALVTGGEIVS-----TFDNPELVKLGECDLIEEIMIGEDKLIKFSGVKLGEACT---IVLR----GATQQILDE 380 (527)
T ss_pred hhHHHHhhcccceeee-----ccCCcchhccccchhhHHHhcCccceeeecccccccceE---EEEe----cccHHHHHH
Confidence 5689999999999999 79999999999999886 7888888888875443321 1244 344444444
Q ss_pred HHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHcC-ccccchHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhHHHHH
Q 007643 425 KLNERIAKLSGGVAVIQLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKL 503 (595)
Q Consensus 425 ~L~ERi~~l~gg~a~i~~~i~Dal~~~k~al~~g-vVpGGGa~e~~ls~~L~~~~~~~~~~~q~~~i~~~a~AL~~ip~~ 503 (595)
. | |++|||||++-..+++. +|.||||+||..++.+.+++...++++- .++++|++||.++|.+
T Consensus 381 a--e-------------RslHDALcVLaqtv~esrvv~GgG~sEm~Ma~av~~~A~~~pGkea-~AieAfarAL~qlPti 444 (527)
T KOG0363|consen 381 A--E-------------RSLHDALCVLAQTVKESRVVLGGGCSEMLMAKAVDKEAQETPGKEA-LAIEAFARALRQLPTI 444 (527)
T ss_pred H--H-------------HHHHHHHHHHHHHhccceeeecCCcHHHHHHHHHHHHHhhCCchhh-HHHHHHHHHHHhcchh
Confidence 2 4 79999999999999997 9999999999999999999988888765 8999999999999999
Q ss_pred HHHhcCCchHHHHHHhhhc---CCCceeeecCCCccccccccCcccchHHHHHHHHHHHHHHHHHhchhHHhhccCCCCC
Q 007643 504 IAKNAGVNGSVVSEKVLSS---DNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEP 580 (595)
Q Consensus 504 L~~NaG~d~~~vi~kl~~~---~~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~~~~~ 580 (595)
||.|+|+|+.+++++|++. +...+|+|+.+|++.||.+.||+|.+.+|.+.+.+|.|+|.+|||+|.||...|++..
T Consensus 445 iaDNaG~dsaelva~Lra~h~~g~~t~Gld~~~G~i~dm~~~Gi~es~~vK~~vv~sasEaae~ilrvD~Iik~aPR~r~ 524 (527)
T KOG0363|consen 445 IADNAGYDSAELVAQLRAEHYNGRTTMGLDVRNGEIGDMRELGIVESLKVKQAVVSSASEAAEMILRVDNIIKAAPRERE 524 (527)
T ss_pred hhccCCCCHHHHHHHHHHHhhcCCcccccccccCchhhHHHhhhHHHHHHHHHHHhhhHHHHHHHHhhhhhhhcCCcccc
Confidence 9999999999999999975 4579999999999999999999999999999999999999999999999999887543
No 38
>KOG0362 consensus Chaperonin complex component, TCP-1 theta subunit (CCT8) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=9.9e-68 Score=550.13 Aligned_cols=462 Identities=24% Similarity=0.328 Sum_probs=398.2
Q ss_pred CcHHHHHHHHHHHHHHHHhhhhccCcCCCceeeecCCCCcEEecChHHHhccccccCccchHHHHHHHHHHHhcccccCC
Q 007643 70 KDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGD 149 (595)
Q Consensus 70 ~~~~~~~~~~~~v~~la~~v~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~l~l~hP~enigakLl~~~a~~qd~~~GD 149 (595)
+.+++...++.+|+.|+++++|+|||+||+||++|..|+..+|||.+||+++++++||+ ||||++++++|+++.||
T Consensus 23 ~~e~~v~~ni~a~~ela~~~rs~yGpng~nK~vvnh~~k~~~TndaatIlrelev~HPa----akllv~a~~~q~~~iGD 98 (537)
T KOG0362|consen 23 GEEEAVIRNIAAVRELANVIRSAYGPNGRNKMVVNHLGKTFVTNDAATILRELEVEHPA----AKLLVEATQMQEEEIGD 98 (537)
T ss_pred cchHHHHHHHHHHHHHHHHHHhhcCCCCcceeeecccceEEEcCChHHHHHHhhccCcH----HHHHHHHHHHHHHhhCC
Confidence 55888899999999999999999999999999999999999999999999999999999 99999999999999999
Q ss_pred CcchHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHccccc-CCch-HHHHHHhhhc-----CChhHHHHH
Q 007643 150 GTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKE-VEDS-ELADVAAVSA-----GNNYEVGNM 222 (595)
Q Consensus 150 GTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~-v~~~-~L~~va~ts~-----~~~~~ls~l 222 (595)
||+++|+|+++||+++.++|..|++|.+|++||+.|.+.+++.|+++... +.+. +...++++++ .++++++++
T Consensus 99 gtnfvvvla~~LLe~Ae~li~~Gl~~~ei~~gy~~A~~~~~e~l~~lv~~~~~d~~d~~~~~rs~i~skq~~~ed~l~~l 178 (537)
T KOG0362|consen 99 GTNFVVVLAGALLEQAEELIRMGLTPAEISEGYETATKEALEILPELVVQSIGDLEDKEWALRSVIMSKQYGNEDFLTKL 178 (537)
T ss_pred CceEeehhHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhHHHHHHhcccccChHHHHHHHHHHhhcchHHHHHHH
Confidence 99999999999999999999999999999999999999999999988542 2222 2234445443 458999999
Q ss_pred HHHHHHhhccCCc-------EEeeCCCcccceeEEEeeeEEeecccCCccccCcccCcccccCeeEEEeccc--------
Q 007643 223 IAEAMSKVGRKGV-------VTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKK-------- 287 (595)
Q Consensus 223 i~~Av~~v~~~g~-------I~v~~G~~~~ds~~li~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~-------- 287 (595)
+++|+..+.+.+. +.+..|+++++| .++.||+|++.. ++....-+.++|.++.|+
T Consensus 179 Va~ac~si~p~~~FnvdnIrVcKi~Gg~l~~S-~Vv~GmVfkr~~---------eG~v~~ak~arvAvf~cP~d~~~TEt 248 (537)
T KOG0362|consen 179 VAKACVSILPLMSFNVDNIRVCKILGGGLEDS-CVVCGMVFKRDP---------EGEVKSAKDARVAVFACPFDIAQTET 248 (537)
T ss_pred HHHHHHhhcccccccccceEEEEEecCCcccc-eeeEEEEecccc---------CCcccccccceeEEEecCCCcccccC
Confidence 9999999988631 445799999999 899999999873 334456678899999887
Q ss_pred -----CCCHHHHHH-----------HHHHHHHcCCCEEEEeccccHHHHHHHHHHhhcccceeEEeeCCCcccchhhhHH
Q 007643 288 -----ITNARDLIN-----------VLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLD 351 (595)
Q Consensus 288 -----i~~~~~i~~-----------~le~i~~~g~~lvIi~~~i~~~aL~~L~~n~~~g~~~i~av~~~~~~~~~~~~L~ 351 (595)
|++++++.+ .++.+...|+++|++...+++.+|+++ |++ +|+++++++ +.+|.
T Consensus 249 kgTvLi~~A~el~~FSKgEe~lle~~vk~Ia~~gvkViV~~g~V~em~Lhfl--nky----~ImVlqi~S-----k~eLr 317 (537)
T KOG0362|consen 249 KGTVLLKNAKELLNFSKGEEALLEEQVKAIADAGVKVIVSGGKVDEMTLHFL--NKY----KIMVLQINS-----KFDLR 317 (537)
T ss_pred cceeeecCcHhhhhhccccHHHHHHHHHHHHhcCCeEEEecCccchhhhhhh--ccc----cEEEEEecc-----HhhHH
Confidence 777776654 466788899999999999999988754 554 799999887 67789
Q ss_pred HHHHHhCCeEeecCCCccccCCCCCCceeeeEEE---EecCeEEEEccCCCchhhhhHHHHHHHHHHhhchHHHHHHHHH
Q 007643 352 DIAILTGGTVIRDEVGLALDKVGKEVLGNASKVV---LTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNE 428 (595)
Q Consensus 352 ~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~---i~~~~~~ii~~~~~~~~i~~r~~~lr~~l~~~~~~~~~e~L~E 428 (595)
|+|+..||.+.+ ++..+.+..+|+|++|. ++++.+++|....... |+..+ .|++++..+.+|. |
T Consensus 318 rlcrtvGA~~l~-----rl~~P~~~~lG~~d~V~~~EiG~~~v~vF~~e~~~~----~~~Tv--VLRgst~s~LDd~--E 384 (537)
T KOG0362|consen 318 RLCRTVGATALP-----RLFPPAPEELGYCDSVSTQEIGDTLVVVFRWESTGT----RVATV--VLRGATQSILDDA--E 384 (537)
T ss_pred HHHHHcCCccch-----hccCCCCccccccceeeeeecCCceEEEEeeccCCC----ceeEE--EEcccchhhHHHH--H
Confidence 999999999998 68888899999999985 6788888887654211 11111 1345666666652 4
Q ss_pred HHHHhcCcHHHHHHHHHHHHHHHHHHHHcC-ccccchHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhHHHHHHHHh
Q 007643 429 RIAKLSGGVAVIQLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKN 507 (595)
Q Consensus 429 Ri~~l~gg~a~i~~~i~Dal~~~k~al~~g-vVpGGGa~e~~ls~~L~~~~~~~~~~~q~~~i~~~a~AL~~ip~~L~~N 507 (595)
|.++|+++..|...+++ ++||+|++|+++++.|.++..++++.+| ++++.|++||+.+|++|++|
T Consensus 385 -------------RAVddgV~tyK~l~~d~rLlpGagatEieLak~i~~~g~~~~Gl~q-~Aik~fa~Ale~~PktlaEn 450 (537)
T KOG0362|consen 385 -------------RAVDDGVNTYKALCSDSRLLPGAGATEIELAKQISSRGATLPGLKQ-LAIKKFAEALEVLPKTLAEN 450 (537)
T ss_pred -------------HHHHHhHHHhhhhccCCccccCCchhHHHHHHHHHHhcccCCCcch-hHHHHHHHHhccccHhHHHh
Confidence 79999999999999998 9999999999999999999999999988 89999999999999999999
Q ss_pred cCCchHHHHHHhhhcC--CCceeeecCCC-ccccccccCcccchHHHHHHHHHHHHHHHHHhchhHHhhccCCCCCCCC
Q 007643 508 AGVNGSVVSEKVLSSD--NHKYGYNAATG-NYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMP 583 (595)
Q Consensus 508 aG~d~~~vi~kl~~~~--~~~~Gid~~~g-~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~~~~~~~~ 583 (595)
+|++..+++++|+.-| ..+.|+|+..+ ...|+.+.||||-+.+|.++++.|+++|+++|++|+||+.+|...|+.|
T Consensus 451 agl~~~evia~ly~~h~~g~~~g~di~~e~~~~d~~~~~i~D~~~~K~~a~k~at~aa~tvl~vDqiimak~aggp~~~ 529 (537)
T KOG0362|consen 451 AGLAVTEVIAKLYAVHQGGKNLGMDIEAEGGTIDVREEGIWDTLAVKAQAIKLATEAALTVLTVDQIIMAKKAGGPKPP 529 (537)
T ss_pred cCCcHHHHHHHHHHhhcCCCcceeeeeccccccChhhhchHHHHHHHHHHHHHHHhhhheeeehhheeEecccCCCCCC
Confidence 9999999999998754 35678888766 5899999999999999999999999999999999999999998887744
No 39
>KOG0360 consensus Chaperonin complex component, TCP-1 alpha subunit (CCT1) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.5e-67 Score=545.23 Aligned_cols=463 Identities=23% Similarity=0.316 Sum_probs=400.4
Q ss_pred HHHHHHHHHHHHHHHHhhhhccCcCCCceeeecCCCCcEEecChHHHhccccccCccchHHHHHHHHHHHhcccccCCCc
Q 007643 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (595)
Q Consensus 72 ~~~~~~~~~~v~~la~~v~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~l~l~hP~enigakLl~~~a~~qd~~~GDGT 151 (595)
+.+|..+..++..++++|++||||-|+|||+++..|++.+||||+|||+.+.++||+ +|++++.++.||+++||||
T Consensus 18 ~~vr~qnv~a~~~i~nivkss~GPvGldKmlvdd~Gdvt~TndgAtiL~~l~V~HPa----~KiLvelaq~qd~evgDgt 93 (545)
T KOG0360|consen 18 ERVRTQNVMAAMAIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILSLLEVEHPA----AKVLVELAQLQDEEVGDGT 93 (545)
T ss_pred hhhhhhhhHHHHHHHHHHHhccCccchhhhccccccceEEeccHHHHHHhhhhcchH----HHHHHHHHHhccccccCCc
Confidence 778888999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHc-ccccCCch---HHHHHHhhhcCC------hhHHHH
Q 007643 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQ-MSKEVEDS---ELADVAAVSAGN------NYEVGN 221 (595)
Q Consensus 152 Tt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~-~s~~v~~~---~L~~va~ts~~~------~~~ls~ 221 (595)
|++|+++++||+.+.+|+..++||..|+.||+.|+..+++++.+ .++|++.. -|.++++|+++. .++|++
T Consensus 94 tsvviia~eLl~~a~~Lv~~~ihpt~ii~gyr~ac~e~~k~i~~~~~~~vd~lg~~~Lin~~ktsmsSK~i~~ds~~f~~ 173 (545)
T KOG0360|consen 94 TSVVIIAAELLKNADELVKTKIHPTRIISGYRLACIEAVKYITEGLSKPVDSLGTQILINLAKTSMSSKIIGMDSDFFTE 173 (545)
T ss_pred eEEEEEEHHhhhhHHHhhcCCCcceehhhhHHHHHHHHHHHhhccceeehhhcchHHHHHHHHhhhcceecccchHHHHH
Confidence 99999999999999999999999999999999999999999976 57777754 789999998753 589999
Q ss_pred HHHHHHHhhcc---CC---------cEEeeCCCcccceeEEEeeeEEeecccCCccccCcccCcccccCeeEEEeccc--
Q 007643 222 MIAEAMSKVGR---KG---------VVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKK-- 287 (595)
Q Consensus 222 li~~Av~~v~~---~g---------~I~v~~G~~~~ds~~li~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~-- 287 (595)
++++|+..+.- +| .|-+-+|.+.-+| .++.|+.++....+. .|+..+.|+||+++|+.
T Consensus 174 ~Vvda~l~v~~~~~~ge~~ypi~~vnILkahG~s~~eS-~l~~GyaLnc~~asq-------~m~~~i~~~Kiacld~~Lq 245 (545)
T KOG0360|consen 174 MVVDALLAVKILDINGEPHYPINSVNILKAHGKSQIES-MLLPGYALNCSVASQ-------MMPLRIKNAKIACLDFTLQ 245 (545)
T ss_pred HHHHHHHHHhhcccCCceeccccceeEEecCCccchhh-eeecceeeeccHhhh-------ccccccccceeeeEecccc
Confidence 99999988742 22 2444699999999 799999999887653 47888999999999974
Q ss_pred -----------CCCHHHHHH-----------HHHHHHHcCCCEEEEeccccHHHHHHHHHHhhcccceeEEeeCCCcccc
Q 007643 288 -----------ITNARDLIN-----------VLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGER 345 (595)
Q Consensus 288 -----------i~~~~~i~~-----------~le~i~~~g~~lvIi~~~i~~~aL~~L~~n~~~g~~~i~av~~~~~~~~ 345 (595)
+.+++++.+ -++++...|+|+|+++++|||.++.+|+.. +++||| +.
T Consensus 246 k~km~lGv~vvv~dp~kle~ir~~e~~itkeRi~kIl~~ganvVLtt~gIddmc~K~~vea------gamAVr-----R~ 314 (545)
T KOG0360|consen 246 KTKMKLGVQVVVDDPEKLEQIRQREQDITKERIKKILATGANVVLTTGGIDDMCLKYFVEA------GAMAVR-----RC 314 (545)
T ss_pred cccccccceEEEcChHHHHHHHHHHhHhHHHHHHHHHhcCCcEEEEcCCccHHHHHHHHHc------chhhhH-----HH
Confidence 566654422 366888999999999999999999999987 456665 78
Q ss_pred hhhhHHHHHHHhCCeEeecCCCccc-cCCCCCCceeeeEEE---EecCeEEEEccCCCchhhhhHHHHHHHHHHhhchHH
Q 007643 346 KSQYLDDIAILTGGTVIRDEVGLAL-DKVGKEVLGNASKVV---LTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDY 421 (595)
Q Consensus 346 ~~~~L~~ia~~tGa~ii~~~~~~~l-~~~~~~~lG~~~~v~---i~~~~~~ii~~~~~~~~i~~r~~~lr~~l~~~~~~~ 421 (595)
++++|++|+++||++++++..++.= +.+.+.++|+|+.|. +++|++.++.+.... .. ..+||| .++|
T Consensus 315 ~k~dlk~iakatGat~~sSla~l~geetf~~~~lG~a~evvqeri~dde~ilikg~ka~-~a---SiILrg-----aNd~ 385 (545)
T KOG0360|consen 315 KKEDLKRIAKATGATLLSSLANLEGEETFEPASLGSADEVVQERIGDDELILIKGTKAT-SA---SIILRG-----ANDF 385 (545)
T ss_pred HHHHHHHHHHhhCCeeeehhhccccccccChhhccchhHHHHHhcccceeEEeccCccc-ee---eEEEec-----CCcc
Confidence 8999999999999999996433321 356788999999985 789999888774332 11 123443 3456
Q ss_pred HHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHcC-ccccchHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhHH
Q 007643 422 EREKLNERIAKLSGGVAVIQLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYP 500 (595)
Q Consensus 422 ~~e~L~ERi~~l~gg~a~i~~~i~Dal~~~k~al~~g-vVpGGGa~e~~ls~~L~~~~~~~~~~~q~~~i~~~a~AL~~i 500 (595)
.-|+++ |++|||++++|..++++ +|||||++|.+++-+|+.|+.+..+++| +++--|++||.++
T Consensus 386 ~~DEme--------------rs~hdaL~VlkrtLes~~vvpGGG~vE~aLs~yle~~a~s~~srE~-laiaefa~all~i 450 (545)
T KOG0360|consen 386 MLDEME--------------RSLHDALCVLKRTLESKSVVPGGGAVETALSIYLENFATSVGSREQ-LAIAEFAAALLSI 450 (545)
T ss_pred cHhhhc--------------cchhhHHHHHHHHhccCccccCccHHHHHHHHHHHhhcccCccHHH-HHHHHHHHHHhcc
Confidence 555554 79999999999999999 9999999999999999999988877776 6788899999999
Q ss_pred HHHHHHhcCCchHHHHHHhhhcC-----------CCceeeecCCCccccccccCcccchHHHHHHHHHHHHHHHHHhchh
Q 007643 501 LKLIAKNAGVNGSVVSEKVLSSD-----------NHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSD 569 (595)
Q Consensus 501 p~~L~~NaG~d~~~vi~kl~~~~-----------~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD 569 (595)
|++|+-|++.|+.+++.+++..| ..|+|+|+.+|++.|.++.|+++|..+|..+|+.|+|.+..+||+|
T Consensus 451 pktla~naa~Dstelvt~lra~Hs~~q~~p~~~~~k~~GldL~ng~~~dn~~~g~~ep~~~kvksLk~ateaaitiLriD 530 (545)
T KOG0360|consen 451 PKTLAVNAAKDSTELVTKLRAYHSVSQDNPWRLLLKQYGLDLINGKIRDNKSAGSFEPPIVKVKSLKFATEAAITILRID 530 (545)
T ss_pred hHHHhhhhccccccccccccCCchhhccCCccccchhhCccccccEeecceeeeeeccceeehhhhHHHHHhhhhhcchh
Confidence 99999999999999999998532 2589999999999999999999999999999999999999999999
Q ss_pred HHhhccCCCCCC
Q 007643 570 CVVVEIKEPEPA 581 (595)
Q Consensus 570 ~iI~~~~~~~~~ 581 (595)
++|.-.|+.+..
T Consensus 531 ~li~l~~~~~~~ 542 (545)
T KOG0360|consen 531 DLIKLLPELQVA 542 (545)
T ss_pred hhhhcCcccccc
Confidence 999887775543
No 40
>KOG0364 consensus Chaperonin complex component, TCP-1 gamma subunit (CCT3) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.2e-63 Score=511.93 Aligned_cols=453 Identities=21% Similarity=0.291 Sum_probs=395.9
Q ss_pred HHHHHHHHHHHHHhhhhccCcCCCceeeecCCCCcEEecChHHHhccccccCccchHHHHHHHHHHHhcccccCCCcchH
Q 007643 75 MKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTS 154 (595)
Q Consensus 75 ~~~~~~~v~~la~~v~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~l~l~hP~enigakLl~~~a~~qd~~~GDGTTt~ 154 (595)
...++++.+.++|+++++|||+.|.||+.++.|.+..||||..|+++|++.||. |+-+.+.+.+||+|+|||||||
T Consensus 21 q~~ni~aak~iadvirtclgp~am~kmlld~~g~i~~tndg~ailrei~Vahpa----aksmiel~rtqdeevgdgttsv 96 (527)
T KOG0364|consen 21 QLGNIQAAKAIADVIRTCLGPRAMLKMLLDPMGGIVLTNDGNAILREIDVAHPA----AKSMIELSRTQDEEVGDGTTSV 96 (527)
T ss_pred cccchhhHHHHHHHHHHhcChHHHHHHhhccCCceEEecCcHHHHHHHhhcCcc----hhhHhhhhhcccccccCCceee
Confidence 334688999999999999999999999999999999999999999999999999 9999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHcccccCCch---HHHHHHhhhcC------ChhHHHHHHHH
Q 007643 155 VVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS---ELADVAAVSAG------NNYEVGNMIAE 225 (595)
Q Consensus 155 vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~---~L~~va~ts~~------~~~~ls~li~~ 225 (595)
++|++|+|.++..++++|+||+.|++.|.+|++.++..++.++++++.+ .+..+..++.. +.+.++++..+
T Consensus 97 i~lagE~L~~~~~~l~~~~Hp~~i~ka~~~aled~~~~~~~~~~~~d~~~~~km~~vi~~~v~tk~~~~~~~~~~~lal~ 176 (527)
T KOG0364|consen 97 IILAGEMLNVAEPFLEEGIHPTVIIKAYIKALEDNIRALDKISIPVDVKDQAKMLRVINSSVGTKFNSRWSDLICNLALD 176 (527)
T ss_pred eeehHHHhhhcchhhhcCcchHHHHHHHHHHHHHHHHHHHhhcccCCcccHHHHHhhhhhhhhhhhhhhhcchhhhHHHH
Confidence 9999999999999999999999999999999999999999988887643 67777776643 46788999999
Q ss_pred HHHhhccC-Cc---------EEeeCCCcccceeEEEeeeEEeecccCCccccCcccCcccccCeeEEEecccCC------
Q 007643 226 AMSKVGRK-GV---------VTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKIT------ 289 (595)
Q Consensus 226 Av~~v~~~-g~---------I~v~~G~~~~ds~~li~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~------ 289 (595)
|+++++.+ |. +.+.+|+.++|| ++++|+.+.+...||. |+..++||+|+++|+++.
T Consensus 177 avk~V~~~~g~e~dik~y~kveKvpgg~l~~s-~vl~Gv~~nkdv~Hpk-------mrr~IenprivLlD~~LeykkGeS 248 (527)
T KOG0364|consen 177 AVKTVGVENGREIDIKRYAKVEKVPGGLLEDS-CVLKGVMINKDVTHPK-------MRRAIENPRIVLLDCPLEYKKGES 248 (527)
T ss_pred HHHHhhhccCceechhhhccccccCccccccc-ceecceeeccccCcHH-------HHHHhhcCcEEEecCCccCCCCcc
Confidence 99999865 32 234699999999 9999999999998874 778899999999998631
Q ss_pred ------------------CHHHHHHHHHHHHHcCCCEEEEeccccHHHHHHHHHHhhcccceeEEeeCCCcccchhhhHH
Q 007643 290 ------------------NARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLD 351 (595)
Q Consensus 290 ------------------~~~~i~~~le~i~~~g~~lvIi~~~i~~~aL~~L~~n~~~g~~~i~av~~~~~~~~~~~~L~ 351 (595)
+.+++..+++.+....++||++.++++|.|.++|.+++. . +++++|+.+-.
T Consensus 249 qtnve~~~eed~~r~Lqieee~v~~mc~~Ii~v~pDlVitekG~sdla~hyl~k~~i------T-----~~rr~rKtDn~ 317 (527)
T KOG0364|consen 249 QTNVEIVKEEDFTRILQIEEEQVQAMCEVIIAVKPDLVITEKGVSDLAQHYLLKANI------T-----AIRRLRKTDNN 317 (527)
T ss_pred ccceeeeechhHHHHHHhhHHHHHHHHHHHHeecccEEEeccchhHHHHHHHHhcCc------h-----hhhhhhccccc
Confidence 112345677888899999999999999999999998753 3 44588999999
Q ss_pred HHHHHhCCeEeecCCCccccCCCCCCcee-eeEEE---EecCeEEEEccCCCchhhhhHHHHHHHHHHhhchHHHHHHHH
Q 007643 352 DIAILTGGTVIRDEVGLALDKVGKEVLGN-ASKVV---LTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLN 427 (595)
Q Consensus 352 ~ia~~tGa~ii~~~~~~~l~~~~~~~lG~-~~~v~---i~~~~~~ii~~~~~~~~i~~r~~~lr~~l~~~~~~~~~e~L~ 427 (595)
+++++||+++++ +++++.+.+.|. |+.++ ++++.|+||..|.++.+++. ++|| .+.+ .|+
T Consensus 318 ria~acga~iv~-----rpedl~e~dvGt~agLf~~kK~gdeyf~f~~~Ck~pkaCti---llrg----~skd----il~ 381 (527)
T KOG0364|consen 318 RIARACGARIVN-----RPEDLPERDVGTGAGLFEVKKIGDEYFTFFTDCKEPKACTI---LLRG----PSKD----ILN 381 (527)
T ss_pred hhhhhcCceecc-----ChhhCchhccCcccceeeeeccCchhhhhhhhcCCCcceEE---Eecc----Cchh----HHH
Confidence 999999999999 699999999996 77887 56889999999998887532 3443 3433 344
Q ss_pred HHHHHhcCcHHHHHHHHHHHHHHHHHHHHcC-ccccchHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhHHHHHHHH
Q 007643 428 ERIAKLSGGVAVIQLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAK 506 (595)
Q Consensus 428 ERi~~l~gg~a~i~~~i~Dal~~~k~al~~g-vVpGGGa~e~~ls~~L~~~~~~~~~~~q~~~i~~~a~AL~~ip~~L~~ 506 (595)
| +.|.+.||+.+.|+.+-++ ++||||++||..|+.|.+.+....+-++ +.|.+++.||+.+|++|++
T Consensus 382 e-----------~ernlqda~~varn~ii~PklvPGGGAtEMAvs~~L~qksa~~~GVek-wPY~Ava~AlEviPrtliq 449 (527)
T KOG0364|consen 382 E-----------VERNLQDAMGVARNVIINPKLVPGGGATEMAVSHELRQKSALMTGVEK-WPYGAVAGALEVIPRTLIQ 449 (527)
T ss_pred H-----------HHHHhhhHHHHHHHhccCCcccCCccHHHHHHHHHHHHHHhhccchhc-cchhhhhcCceeccHHHHh
Confidence 3 2378999999999999998 9999999999999999987776666655 8899999999999999999
Q ss_pred hcCCchHHHHHHhhhcC---CCceeeecCCCccccccccCcccchHHHHHHHHHHHHHHHHHhchhHHhhccCCC
Q 007643 507 NAGVNGSVVSEKVLSSD---NHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEP 578 (595)
Q Consensus 507 NaG~d~~~vi~kl~~~~---~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~~~ 578 (595)
|+|.+++..+..++..+ ...||+|..+|.+.||.+.++|||..+|.+..++|.+.++++||+|+++...+..
T Consensus 450 ncGan~Ir~lTalr~kh~~G~~~~gi~g~tg~iVDm~~~~iwep~~vK~Q~~ktavesa~~LLRIddIvsg~kk~ 524 (527)
T KOG0364|consen 450 NCGANPIRALTALRAKHKEGQRVWGIDGETGVIVDMVELGIWEPEAVKLQTGKTAVESACLLLRIDDIVSGKKKR 524 (527)
T ss_pred hcCccHHHHHHHHHHHhcCcceeecccCceeeEeeeeeccccchhhhhhhhhhHHHHHHHHHHhhhceeeeeeec
Confidence 99999999999887643 3678999999999999999999999999999999999999999999999886653
No 41
>KOG0359 consensus Chaperonin complex component, TCP-1 zeta subunit (CCT6) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2e-59 Score=480.16 Aligned_cols=450 Identities=23% Similarity=0.355 Sum_probs=385.0
Q ss_pred HHHHHHHHHHHHHHhhhhccCcCCCceeeecCCCCcEEecChHHHhccccccCccchHHHHHHHHHHHhcccccCCCcch
Q 007643 74 AMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTT 153 (595)
Q Consensus 74 ~~~~~~~~v~~la~~v~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~l~l~hP~enigakLl~~~a~~qd~~~GDGTTt 153 (595)
+...++.+..-+.+++++.+||+|..||++++.|++++|+||.+.+++|+++||. +-++..++..|++..||||||
T Consensus 18 al~iNis~AigLqsV~~snlgPkgt~KmlvsgagdIklakdgnvLl~emQiqhPT----a~lIakaatAqdd~tGDGttS 93 (520)
T KOG0359|consen 18 ALALNISAAIGLQSVLVLNLGPKGTEKMLVSGAGDIKLAKDGNVLLKEMQIQHPT----ASLIAKVATAQDDITGDGTTS 93 (520)
T ss_pred ceeeccccccceeeeehhccCchhHHHhccCCccceEEEecchhhHHHHhhcCch----HHHHHHHHHHhhcccCCCcce
Confidence 4456677888899999999999999999999999999999999999999999999 999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHcccccCCchHHHHHHhhhcCCh------hHHHHHHHHHH
Q 007643 154 SVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDSELADVAAVSAGNN------YEVGNMIAEAM 227 (595)
Q Consensus 154 ~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~L~~va~ts~~~~------~~ls~li~~Av 227 (595)
+|+|+++||+++..++..|+||..|+.||+.|.+.++++|+..+.+++.+.|..+++|+++.+ +.+++++++|+
T Consensus 94 ~VlligEllkqa~~~i~eGlhprii~~gfe~a~~~~l~~L~k~~~~~~~~~L~~va~tsl~Tkv~~~la~~lt~~vv~aV 173 (520)
T KOG0359|consen 94 VVLLIGELLKQADRYISEGLHPRIITEGFEAAKNKALEFLEKVSREVDRETLKDVARTSLRTKVHAELADVLTPIVVDSV 173 (520)
T ss_pred EEEeeHHHHHHHHHHhhcCCCcchhhhHHHHHHHHHHhhhhccccchhHHHHHHHHHHhhcCcccHHHHhHhHHHHHhhh
Confidence 999999999999999999999999999999999999999997777776558999999998763 67888999999
Q ss_pred Hhhcc-CCcEE-------eeCCCcccceeEEEeeeEEeecccCCccccCcccCcccccCeeEEEecccC-----------
Q 007643 228 SKVGR-KGVVT-------LEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKI----------- 288 (595)
Q Consensus 228 ~~v~~-~g~I~-------v~~G~~~~ds~~li~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~i----------- 288 (595)
..+.+ ++.|. .-+-.+..|+ .+++|.++|+|-+||. ||+..+|++||+++..+
T Consensus 174 l~i~~~~~~idl~mveim~mq~~s~~dT-~~v~glvLdhg~rHpd-------mp~~~e~a~iL~~NvSLEYEK~Einsgf 245 (520)
T KOG0359|consen 174 LCIRRQEEPIDLFMVEIMEMQHKSLHDT-SLVQGLVLDHGARHPD-------MPRRVEDAYILICNVSLEYEKPEINSGF 245 (520)
T ss_pred eeeccCCCCcchhHHHhhhhccCchhhh-HHhhhhhccCCCCCcc-------cccchhceEEEEeeccccccccccccch
Confidence 88873 22211 1244566777 7999999999999985 78899999999998652
Q ss_pred --CCHHHH-----------HHHHHHHHHcCC---CEE-EEeccccHHHHHHHHHHhhcccceeEEeeCCCcccchhhhHH
Q 007643 289 --TNARDL-----------INVLEDAIRGAY---PIL-IIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLD 351 (595)
Q Consensus 289 --~~~~~i-----------~~~le~i~~~g~---~lv-Ii~~~i~~~aL~~L~~n~~~g~~~i~av~~~~~~~~~~~~L~ 351 (595)
++++|- .+-+.++++.+. .+| |.+++||+..|+.|..+ +|+|+| +.++..||
T Consensus 246 fYsta~ere~L~~~eR~Fi~~r~~kiielk~~vc~fvvinqkGidp~sld~~a~~------gIlaLR-----RAKRRNmE 314 (520)
T KOG0359|consen 246 FYSTAEEREVLVLAERKFIDQRVRKIIELKRKVCEFVVINQKGIDPTSLDSLAKS------GILALR-----RAKRRNME 314 (520)
T ss_pred hccchhHHHHHHHHHHHHHHHHHHHHHHHhhhcceEEEecccCCCCCcchhhhhc------chHHHH-----HHhhhhHH
Confidence 233221 122344444442 355 55689999999999876 456665 77889999
Q ss_pred HHHHHhCCeEeecCCCccccCCCCCCceeeeEEE---EecCeEEEEccCCCchhhhhHHHHHHHHHHhhchHHHHHHHHH
Q 007643 352 DIAILTGGTVIRDEVGLALDKVGKEVLGNASKVV---LTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNE 428 (595)
Q Consensus 352 ~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~---i~~~~~~ii~~~~~~~~i~~r~~~lr~~l~~~~~~~~~e~L~E 428 (595)
|+..+|||..++ ++++++|++||+|+.|+ +++++|||++++.++..++. +++| .+.|.
T Consensus 315 RL~lacGG~a~n-----svddLtp~~LG~aglVye~tlGEEkfTFIE~~~~p~S~Ti---Likg-----pnkht------ 375 (520)
T KOG0359|consen 315 RLVLACGGEAVN-----SVDDLTPDYLGYAGLVYEYTLGEEKFTFIEKCNNPSSVTI---LIKG-----PNKHT------ 375 (520)
T ss_pred HHHHhhccceec-----ccccCChhhccccceeEEeeccceeeEeeecCCCCcceEE---EEeC-----Cccch------
Confidence 999999999998 69999999999999996 68999999999999877542 2332 33343
Q ss_pred HHHHhcCcHHHHHHHHHHHHHHHHHHHHcC-ccccchHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhHHHHHHHHh
Q 007643 429 RIAKLSGGVAVIQLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKN 507 (595)
Q Consensus 429 Ri~~l~gg~a~i~~~i~Dal~~~k~al~~g-vVpGGGa~e~~ls~~L~~~~~~~~~~~q~~~i~~~a~AL~~ip~~L~~N 507 (595)
+.+||+.++|++++++++++++ ++||+|++|.++..+|+...++.+++.+ +|+++|++||..+|++|++|
T Consensus 376 --------~tQikdairdglrav~ntl~d~~~i~Gaga~~va~~~~lr~~k~~vkgra~-~g~~afa~all~ipk~La~n 446 (520)
T KOG0359|consen 376 --------ITQIKDAIRDGLRAVKNTLEDKCGIPGAGAFEVALGRHLRESKKSVKGRAY-LGVKAFANALLVIPKTLAKN 446 (520)
T ss_pred --------HHHHHHHHhhHHHHHHHHhhhcccccCchHHHHHHHHHHHHhhhccCchhh-hhHHHHHhhhhhhhHHHHHh
Confidence 2346689999999999999998 9999999999999999988877888765 89999999999999999999
Q ss_pred cCCchHHHHHHhhhcCC-CceeeecCCCccccccccCcccchHHHHHHHHHHHHHHHHHhchhHHhhc
Q 007643 508 AGVNGSVVSEKVLSSDN-HKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVE 574 (595)
Q Consensus 508 aG~d~~~vi~kl~~~~~-~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~~ 574 (595)
+|+|+.+.+.+|...+. ...|+|+.+|+..|....||||.+.||++.|.+++-+|+.||-+|+|+..
T Consensus 447 sg~D~qe~l~~l~~e~~~~~~g~dl~~g~~~~~~~~gi~Dny~v~~~~l~s~~via~nlLlvDEi~rA 514 (520)
T KOG0359|consen 447 SGLDEQETLVSLKKEHEVTLRGLDLFRGEECDPSRKGIYDNYSVKKQLLRSEAVIATNLLLVDEIIRA 514 (520)
T ss_pred cCCchHHHHHHHHHhhhhhhcccccccCCccchhhccccchHHHHHHHhhhhHHHHHHHHHHHHHHHc
Confidence 99999999999876543 34699999999999999999999999999999999999999999999965
No 42
>KOG0357 consensus Chaperonin complex component, TCP-1 epsilon subunit (CCT5) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.9e-56 Score=446.38 Aligned_cols=374 Identities=24% Similarity=0.295 Sum_probs=331.1
Q ss_pred ccccccccccccCCcHHHHHHHHHHHHHHHHhhhhccCcCCCceeeecCCCCcEEecChHHHhccccccCccchHHHHHH
Q 007643 57 TPKIYAAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLV 136 (595)
Q Consensus 57 ~~~~~~~k~~~f~~~~~~~~~~~~~v~~la~~v~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~l~l~hP~enigakLl 136 (595)
.+|-.-.|.-.|| -++.+..+-+...+++++++|+||+|++|++..+.|++.+|||| .|+. ++++
T Consensus 14 iLrDQd~~~Ri~G--~ea~Ks~I~agkaVA~~lrtSLGPkGlDK~l~~pdgditvtndg---------d~~I----akLm 78 (400)
T KOG0357|consen 14 ILRDQERKDRLFG--LDAVKSHIGAAKAVARILRTSLGPKGLDKMLVSPDGDITVTNDG---------VHQI----AKLI 78 (400)
T ss_pred EeeeccCCchhhH--HHHhhhhhHHHHHHHHHHHhhcCccccccccccCCCCceeeecc---------chHH----HHHH
Confidence 3444445667788 99999999999999999999999999999999999999999999 6787 9999
Q ss_pred HHHHHhcccccCCCcchHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHcccccCCchHHHHHHhhhcCCh
Q 007643 137 RQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDSELADVAAVSAGNN 216 (595)
Q Consensus 137 ~~~a~~qd~~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~L~~va~ts~~~~ 216 (595)
...++.|+.++|||||.+++|++.+++++.+++..|+||..|.+||+.+.+.++++|.+.+.+++
T Consensus 79 v~LS~sqd~eIgdGtTgVvvLa~alleqa~~li~~~ihpiki~~g~e~~~~~av~~l~~i~~~~e--------------- 143 (400)
T KOG0357|consen 79 VILSKSQDDEIGDGTTGVVVLAGALLEQAHELIDRGIHPIKIAQGYEKAKVVAVEHLDEISDPFE--------------- 143 (400)
T ss_pred HHhcccchhhhccCCcccEEecccchHhHHhhcccccchhHHHHhhhhHHHhhhhhhhhhccccc---------------
Confidence 99999999999999999999999999999999999999999999999999999999888775543
Q ss_pred hHHHHHHHHHHHhhccCCcEEeeCCCcccceeEEEeeeEEeecccCCccccCcccCcccccCeeEEEecccCCCHHHHHH
Q 007643 217 YEVGNMIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLIN 296 (595)
Q Consensus 217 ~~ls~li~~Av~~v~~~g~I~v~~G~~~~ds~~li~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~~~~~i~~ 296 (595)
+..
T Consensus 144 -----------------------------------------------------------------------------f~e 146 (400)
T KOG0357|consen 144 -----------------------------------------------------------------------------FEE 146 (400)
T ss_pred -----------------------------------------------------------------------------HHH
Confidence 445
Q ss_pred HHHHHHHcCCCEEEEeccccHHHHHHHHHHhhcccceeEEeeCCCcccchhhhHHHHHHHhCCeEeecCCCccccCCCCC
Q 007643 297 VLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKE 376 (595)
Q Consensus 297 ~le~i~~~g~~lvIi~~~i~~~aL~~L~~n~~~g~~~i~av~~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~ 376 (595)
+++.+++.|.+++||+|+|||||.++|..|++ |..+|+.-.++|-||++|||++++ .|++++++
T Consensus 147 mi~~vK~~ga~l~icqwgfddeanhll~~n~l-----------pavrwVGGpEiEliAiaT~grIVp-----rF~eL~~~ 210 (400)
T KOG0357|consen 147 MIQQIKETGANLAICQWGFDDEANHLLLQNNL-----------PAVRWVGGPEIELIAIATGGRIVP-----RFSELTAE 210 (400)
T ss_pred HHHHHHhhCCcEEEEecccCchhhhHHhhcCC-----------CceeecCCcceEEEEeecCCeeec-----cHhhhCHh
Confidence 78899999999999999999999999999976 444566677899999999999999 69999999
Q ss_pred CceeeeEEE-E----ecCeEEEEccCCCchhhhhHHHHHHHHHHhhchHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHH
Q 007643 377 VLGNASKVV-L----TKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQLRVEDALNAT 451 (595)
Q Consensus 377 ~lG~~~~v~-i----~~~~~~ii~~~~~~~~i~~r~~~lr~~l~~~~~~~~~e~L~ERi~~l~gg~a~i~~~i~Dal~~~ 451 (595)
.||+|+.|+ + ++|+..+++.|+++.+++. .+||. .....+| -||++|||||++
T Consensus 211 kLG~aglVrE~sfgttkdkmlviEqc~nskaVTi---fvRg~----Nkmii~E---------------akrslhdalCvi 268 (400)
T KOG0357|consen 211 KLGFAGLVREISFGTTKDKMLVIEQCKNSKAVTI---FVRGG----NKMIIEE---------------AKRSLHDALCVI 268 (400)
T ss_pred hccccceEEEEecccccceEEEEEecCCCceEEE---EEecC----cceeHHH---------------HHHHhhhhHHHH
Confidence 999999986 2 4789999999998887643 34432 2111111 228999999999
Q ss_pred HHHHHcC-ccccchHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhHHHHHHHHhcCCchHHHHHHhhh----cCCCc
Q 007643 452 KAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLS----SDNHK 526 (595)
Q Consensus 452 k~al~~g-vVpGGGa~e~~ls~~L~~~~~~~~~~~q~~~i~~~a~AL~~ip~~L~~NaG~d~~~vi~kl~~----~~~~~ 526 (595)
|+.+++. +|.|||++|+.||-.+.+.+.++++.+| +++.+|++||++||-.||+|+|++|++.++++++ ..+++
T Consensus 269 rnlird~rivYgGGaaEiscslav~~ead~~~g~eq-ya~rafa~ale~ipmalaensgl~pi~~ls~~ka~q~~~~~~~ 347 (400)
T KOG0357|consen 269 RNLIRDNRVVYGGGAAEISCALAVSQEADKIPGIEQ-YAFRAFADALESIPMALAENSGLDPIETLSDVKARQVKEMNPA 347 (400)
T ss_pred HHHhhcCeeEecCchHHhhhhhHhhHhhccCCcHHH-HHHHHHHHHHhhcchhhhhccCCCchhhhhHhHHHHHHhcCcc
Confidence 9999998 9999999999999999999999999887 7999999999999999999999999999999975 35689
Q ss_pred eeeecCCCccccccccCcccchHHHHHHHHHHHHHHHHHhchhHHhhccC
Q 007643 527 YGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIK 576 (595)
Q Consensus 527 ~Gid~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~ 576 (595)
+|+|+.-..--||.+.+|+||+..|++.+..|++++.|||+||+|+....
T Consensus 348 lGidcl~~G~nDMk~~~vie~l~~KkqQi~laTQ~vrMiLKiddv~~~~~ 397 (400)
T KOG0357|consen 348 LGIDCLHKGTNDMKEQHVIETLIGKKQQISLATQMVRMILKIDDVRKPGE 397 (400)
T ss_pred cCcchhccCchhhhhhccHHHhhhhHHHHHHHHHHHHHhhhccceecCCC
Confidence 99999877778999999999999999999999999999999999987643
No 43
>cd03333 chaperonin_like chaperonin_like superfamily. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings, each composed of 7-9 subunits. There are 2 main chaperonin groups. The symmetry of type I is seven-fold and they are found in eubacteria (GroEL) and in organelles of eubacterial descent (hsp60 and RBP). The symmetry of type II is eight- or nine-fold and they are found in archea (thermosome), thermophilic bacteria (TF55) and in the eukaryotic cytosol (CTT). Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. This superfamily also contains related domains from Fab1-like phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinases that only contain the intermediate and apical domains.
Probab=99.88 E-value=5.6e-22 Score=196.09 Aligned_cols=191 Identities=35% Similarity=0.471 Sum_probs=155.4
Q ss_pred HHHHHHhhhcC-----ChhHHHHHHHHHHHhhccC------CcE--EeeCCCcccceeEEEeeeEEeecccCCccccCcc
Q 007643 204 ELADVAAVSAG-----NNYEVGNMIAEAMSKVGRK------GVV--TLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSE 270 (595)
Q Consensus 204 ~L~~va~ts~~-----~~~~ls~li~~Av~~v~~~------g~I--~v~~G~~~~ds~~li~G~~~~~g~~~p~~~~~~~ 270 (595)
.|.++|+|+++ +++.+++++++|+..++++ +.| ...+|++++|| ++++|++|+++|.+|+
T Consensus 3 ~l~~ia~ts~~sk~~~~~~~l~~l~~~Av~~v~~~~~~~~~~~I~i~~~~gg~~~ds-~li~Gv~~~~~~~~~~------ 75 (209)
T cd03333 3 LLLQVATTSLNSKLSSWDDFLGKLVVDAVLKVGPDNRMDDLGVIKVEKIPGGSLEDS-ELVVGVVFDKGYASPY------ 75 (209)
T ss_pred HHHHHHHHHhccchhhHHHHHHHHHHHHHHHhhccCCCCchHHEEEEEecCcChhhc-eeEeeEEEeccccCCC------
Confidence 57899999988 7899999999999999872 344 44699999999 9999999999999986
Q ss_pred cCcccccCeeEEEecccCCCHHHHHHHHHHHHHcCCCEEEEeccccHHHHHHHHHHhhcccceeEEeeCCCcccchhhhH
Q 007643 271 KMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYL 350 (595)
Q Consensus 271 ~~~~~~~n~~Ill~d~~i~~~~~i~~~le~i~~~g~~lvIi~~~i~~~aL~~L~~n~~~g~~~i~av~~~~~~~~~~~~L 350 (595)
|+.+++||+|+++++++.. +|+++++|++.++++|..+ +|+||+ ++++++|
T Consensus 76 -m~~~~~n~~Ill~~~~le~-----------------vii~~~~I~~~al~~l~~~------~I~~v~-----~~~~~~l 126 (209)
T cd03333 76 -MPKRLENAKILLLDCPLEY-----------------VVIAEKGIDDLALHYLAKA------GIMAVR-----RVKKEDL 126 (209)
T ss_pred -CCeEcCCCcEEEEeCCeeE-----------------EEEecCcccHHHHHHHHHC------CCEEEE-----eCCHHHH
Confidence 5678999999999999776 8888889999999998875 678887 4678999
Q ss_pred HHHHHHhCCeEeecCCCccccCCCCCCceeeeEEEEe---cCeEEEEccCCCchhhhhHHHHHHHHHHhhchHHHHHHHH
Q 007643 351 DDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLT---KDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLN 427 (595)
Q Consensus 351 ~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i~---~~~~~ii~~~~~~~~i~~r~~~lr~~l~~~~~~~~~e~L~ 427 (595)
+|||++|||++++ ++++++++.||+|++|++. ++.++++.++......+. +|| +++.. +.+
T Consensus 127 ~~ia~~tga~ii~-----~~~~~~~~~lG~~~~v~~~~~~~~~~~~~~~~~~~~~~tI---llr----G~t~~-~l~--- 190 (209)
T cd03333 127 ERIARATGATIVS-----SLEDLTPEDLGTAELVEETKIGEEKLTFIEGCKGGKAATI---LLR----GATEV-ELD--- 190 (209)
T ss_pred HHHHHHHCCEEec-----ccccCChhhceeeeEEEEEEECCeEEEEEEcCCCCCEEEE---EEE----CCCHh-HHH---
Confidence 9999999999999 5888889999999999854 567888888765443321 343 33332 222
Q ss_pred HHHHHhcCcHHHHHHHHHHHHHHHHHHHHc
Q 007643 428 ERIAKLSGGVAVIQLRVEDALNATKAAVEE 457 (595)
Q Consensus 428 ERi~~l~gg~a~i~~~i~Dal~~~k~al~~ 457 (595)
| ++|+++||++++++++++
T Consensus 191 e-----------~kr~l~dal~~~~~~~~~ 209 (209)
T cd03333 191 E-----------VKRSLHDALCAVRAAVEE 209 (209)
T ss_pred H-----------HHHHHHHHHHHHHHHhhC
Confidence 2 228999999999999874
No 44
>cd03334 Fab1_TCP TCP-1 like domain of the eukaryotic phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinase Fab1. Fab1p is important for vacuole size regulation, presumably by modulating PtdIns(3,5)P2 effector activity. In the human homolog p235/PIKfyve deletion of this domain leads to loss of catalytic activity. However no exact function this domain has been defined. In general, chaperonins are involved in productive folding of proteins.
Probab=99.86 E-value=4.1e-21 Score=196.03 Aligned_cols=198 Identities=17% Similarity=0.182 Sum_probs=155.8
Q ss_pred ChhHHHHHHHHHHHhhccC---C-------c--EEeeCCCcccceeEEEeeeEEeecccCCccccCcccCcccccCeeEE
Q 007643 215 NNYEVGNMIAEAMSKVGRK---G-------V--VTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLL 282 (595)
Q Consensus 215 ~~~~ls~li~~Av~~v~~~---g-------~--I~v~~G~~~~ds~~li~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Il 282 (595)
+.++|++++++|+..+.++ + . |.+.+|++++|| ++++|++|++++.++ +|+++++||+|+
T Consensus 19 ~~~~ls~l~v~Av~~v~~~~~~~~~~di~~~I~I~ki~Ggs~~dS-~li~Gvvi~k~~~~~-------~m~~~i~n~kIl 90 (261)
T cd03334 19 WLDILLPLVWKAASNVKPDVRAGDDMDIRQYVKIKKIPGGSPSDS-EVVDGVVFTKNVAHK-------RMPSKIKNPRIL 90 (261)
T ss_pred HHHHHHHHHHHHHHHhhcccccCCccChhHceEEEEecCCCHHHc-EEEeeEEEeCCCCCc-------cCCcccCCCcEE
Confidence 3688999999999998532 1 1 344699999999 999999999998774 488899999999
Q ss_pred EecccCCC------HH-----------HHHHHHHHHHHcCCCEEEEeccccHHHHHHHHHHhhcccceeEEeeCCCcccc
Q 007643 283 LVDKKITN------AR-----------DLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGER 345 (595)
Q Consensus 283 l~d~~i~~------~~-----------~i~~~le~i~~~g~~lvIi~~~i~~~aL~~L~~n~~~g~~~i~av~~~~~~~~ 345 (595)
++++++.. +. .+..+++++++.|+++||++++|++.++++|..+ +|++|+ ++
T Consensus 91 ll~~~Le~~~~~~~~~~~~~~~~~E~~~l~~~v~kI~~~g~nvIl~~k~I~~~a~~~l~k~------gI~~v~-----~v 159 (261)
T cd03334 91 LLQGPLEYQRVENKLLSLDPVILQEKEYLKNLVSRIVALRPDVILVEKSVSRIAQDLLLEA------GITLVL-----NV 159 (261)
T ss_pred EEeeeeccccccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCccCHHHHHHHHHC------CCEEEE-----ec
Confidence 99987632 21 2355788999999999999999999999999876 567776 66
Q ss_pred hhhhHHHHHHHhCCeEeecCCCcc-ccCCCCCCceeeeEEEE---ec-----CeEEEEccCCCchhhhhHHHHHHHHHHh
Q 007643 346 KSQYLDDIAILTGGTVIRDEVGLA-LDKVGKEVLGNASKVVL---TK-----DTTTIVGDGSTQDAVSKRVAQIRTLIEN 416 (595)
Q Consensus 346 ~~~~L~~ia~~tGa~ii~~~~~~~-l~~~~~~~lG~~~~v~i---~~-----~~~~ii~~~~~~~~i~~r~~~lr~~l~~ 416 (595)
++.+|++||++|||++++ + .++++++.||+|+.|++ ++ +.++++.+|..+...+. +|||
T Consensus 160 ~~~dl~rIa~~tGa~ii~-----~i~~~~~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~~~~~~TI---lLRG---- 227 (261)
T cd03334 160 KPSVLERISRCTGADIIS-----SMDDLLTSPKLGTCESFRVRTYVEEHGRSKTLMFFEGCPKELGCTI---LLRG---- 227 (261)
T ss_pred CHHHHHHHHHHhCCEEec-----ChhhhcCcccCcCcceEEEEEecCcCCCceeEEEEecCCCCceeEE---EEEC----
Confidence 789999999999999999 4 34788899999999974 33 58999998876554321 3543
Q ss_pred hchHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHcC
Q 007643 417 AEQDYEREKLNERIAKLSGGVAVIQLRVEDALNATKAAVEEG 458 (595)
Q Consensus 417 ~~~~~~~e~L~ERi~~l~gg~a~i~~~i~Dal~~~k~al~~g 458 (595)
++....+| + +|.++||+++++++..+.
T Consensus 228 ~t~~~lde-~--------------eR~i~Dal~v~~~~~le~ 254 (261)
T cd03334 228 GDLEELKK-V--------------KRVVEFMVFAAYHLKLET 254 (261)
T ss_pred CCHHHHHH-H--------------HHHHHHHHHHHHHHHHhH
Confidence 34333222 2 279999999999998775
No 45
>KOG0230 consensus Phosphatidylinositol-4-phosphate 5-kinase and related FYVE finger-containing proteins [Signal transduction mechanisms]
Probab=98.64 E-value=1.2e-07 Score=111.87 Aligned_cols=163 Identities=18% Similarity=0.227 Sum_probs=128.0
Q ss_pred hhHHHHHHHHHHHhhccC----------Cc--EEeeCCCcccceeEEEeeeEEeecccCCccccCcccCcccccCeeEEE
Q 007643 216 NYEVGNMIAEAMSKVGRK----------GV--VTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLL 283 (595)
Q Consensus 216 ~~~ls~li~~Av~~v~~~----------g~--I~v~~G~~~~ds~~li~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill 283 (595)
.+.+..++++|...+.++ +. |+.+.||...|| +++.|+++.+...+ +.|..++++|+|++
T Consensus 334 ~~ii~~L~~eaa~~~kp~~~~~~~md~~~YVkvK~I~~g~~~dS-~vi~Gvv~sKn~~~-------k~M~~~~e~prill 405 (1598)
T KOG0230|consen 334 LDIITSLCWEAANLLKPDTDSGGLMDPGNYVKVKCVAGGSRVDS-EVIKGVVCSKNVAH-------KRMATKYENPRILL 405 (1598)
T ss_pred HHHHHHHHHHHHHhcCcCcccCCCcCcccceEEEEecCCCcccc-eeeeEEEeecchhh-------hhhhhhccCCceEE
Confidence 467888889999988775 12 455789999999 99999999998765 45788999999999
Q ss_pred eccc---------CCCHH--------HHHHHHHHHHHcCCCEEEEeccccHHHHHHHHHHhhcccceeEEeeCCCcccch
Q 007643 284 VDKK---------ITNAR--------DLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERK 346 (595)
Q Consensus 284 ~d~~---------i~~~~--------~i~~~le~i~~~g~~lvIi~~~i~~~aL~~L~~n~~~g~~~i~av~~~~~~~~~ 346 (595)
+.+. +.+.+ .+...+.++...+.++|++.++|++.|..+|... |+.-++ +++
T Consensus 406 l~g~leyqrisn~lsS~etvlqqE~e~lk~~varI~s~~p~vllVeksVS~~aqe~L~~k---~I~lvl--------nvK 474 (1598)
T KOG0230|consen 406 LGGPLEYQRISNQLSSIETVLQQEKEYLKKVVARIESLRPDVLLVEKSVSRIAQELLLDK---GISLVL--------NVK 474 (1598)
T ss_pred EecchhhhhhhccccchHHHHhhHHHHHHHHHHHHHhcCCCeEEEechHHHHHHHHhhcc---CeEEEE--------ecc
Confidence 8765 23332 2344677888889999999999999999988653 332222 788
Q ss_pred hhhHHHHHHHhCCeEeecCCCccccCCCCCCceeeeEEEEe--------cCeEEEEccCCCchh
Q 007643 347 SQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLT--------KDTTTIVGDGSTQDA 402 (595)
Q Consensus 347 ~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i~--------~~~~~ii~~~~~~~~ 402 (595)
...|+||+++||+.|++ +++.++...||+|..+++. .+..+|+.+|+..-.
T Consensus 475 ~s~leRIsR~tga~I~~-----siDslt~~klg~C~~F~v~~~~e~hk~sKTlmffegc~~~lG 533 (1598)
T KOG0230|consen 475 RSLLERISRCTGADIVP-----SVDSLTSQKLGYCELFRVENYVEEHKPSKTLMFFEGCPKPLG 533 (1598)
T ss_pred HHHHHHHHHHhcCceec-----chhhhhccccCCCccHhhhhhhhcccchhhhHHhhcCCCCCC
Confidence 99999999999999998 6888999999999998753 345678888876544
No 46
>COG0459 GroL Chaperonin GroEL (HSP60 family) [Posttranslational modification, protein turnover, chaperones]
Probab=97.26 E-value=0.00096 Score=74.87 Aligned_cols=89 Identities=21% Similarity=0.250 Sum_probs=73.2
Q ss_pred HHHHHHHHHcCCC-EEEEeccccHHHHHHHHHHhhcccceeEEeeCCCcccchhhhH-HHHHHHhCCeEeecCCCccccC
Q 007643 295 INVLEDAIRGAYP-ILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYL-DDIAILTGGTVIRDEVGLALDK 372 (595)
Q Consensus 295 ~~~le~i~~~g~~-lvIi~~~i~~~aL~~L~~n~~~g~~~i~av~~~~~~~~~~~~L-~~ia~~tGa~ii~~~~~~~l~~ 372 (595)
..+++.+.+.|.| +++++++|+|.++++|..+ .|++++ ++.++++ ++|+.+|||+.++ .+++
T Consensus 260 ~~~v~ni~~~g~~~vvv~~~gi~D~~~~~L~d~------~Ilt~~-----~v~~~dl~~~l~~~~ga~~v~-----~~~d 323 (524)
T COG0459 260 ATLVVNILRGGANVVVVKAPGIDDLAKAYLEDI------AILTGR-----RVKKEDLGERLAKLGGAKIVS-----VLKD 323 (524)
T ss_pred HHHHHHHHhcCCCEEEEECCCCcHHHHHHHHhh------cceecc-----eecchhhHHHHHHccCceEEe-----eccc
Confidence 4466788899999 8899999999999999876 456554 6667888 7999999999999 6899
Q ss_pred CCCCCcee--eeEEEE---ecCeEEEEccCCC
Q 007643 373 VGKEVLGN--ASKVVL---TKDTTTIVGDGST 399 (595)
Q Consensus 373 ~~~~~lG~--~~~v~i---~~~~~~ii~~~~~ 399 (595)
.++..+|. |+.|+. +++.++++.++..
T Consensus 324 ~t~~~~G~~~~~~ve~~~~~~~~~~~~~~~~~ 355 (524)
T COG0459 324 LTTIVLGEGAAGLVEETKTGDYDMEKLQERKA 355 (524)
T ss_pred CceeecCccccceEEEeeccchhhhhhhhhhh
Confidence 99999999 999974 5677777777654
No 47
>TIGR02345 chap_CCT_eta T-complex protein 1, eta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT eta chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=42.40 E-value=9.3 Score=43.27 Aligned_cols=61 Identities=26% Similarity=0.412 Sum_probs=50.8
Q ss_pred cCCCEEEEeccccH-----HHHHHHHHHhhcccc----eeEEeeCCCcccchhhhHHHHHHHhCCeEeecC
Q 007643 304 GAYPILIIAEDIEQ-----EALATLVVNKLRGAL----KIAALKAPGFGERKSQYLDDIAILTGGTVIRDE 365 (595)
Q Consensus 304 ~g~~lvIi~~~i~~-----~aL~~L~~n~~~g~~----~i~av~~~~~~~~~~~~L~~ia~~tGa~ii~~~ 365 (595)
...++.+..+++++ +++..++.++.+++. ++++++.| +++...++|++.+++++.++..++
T Consensus 246 ~~~~~~i~~~~~~~~~~~~~~e~~~i~~~i~~i~~~g~~vv~~~~~-i~d~~~~~L~~~~I~~~~~v~~~d 315 (522)
T TIGR02345 246 EKDNAEIRVEDVEDYQAIVDAEWAIIFRKLEKIVESGANVVLSKLP-IGDLATQYFADHNIFCAGRVSDED 315 (522)
T ss_pred cccceEEEECCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCCC-ccHHHHHHHHHCCcEEEecCCHHH
Confidence 34578888888888 888888888888755 78999988 999999999999999998887653
No 48
>PF03102 NeuB: NeuB family; InterPro: IPR013132 NeuB is the prokaryotic N-acetylneuraminic acid synthase (Neu5Ac). It catalyses the direct formation of Neu5Ac (the most common sialic acid) by condensation of phosphoenolpyruvate (PEP) and N-acetylmannosamine (ManNAc). This reaction has only been observed in prokaryotes; eukaryotes synthesise the 9-phosphate form, Neu5Ac-9-P, and utilise ManNAc-6-P instead of ManNAc. Such eukaryotic enzymes are not present in this family []. This family also contains SpsE spore coat polysaccharide biosynthesis proteins.; GO: 0016051 carbohydrate biosynthetic process; PDB: 3G8R_B 1XUU_A 1XUZ_A 3CM4_A 2ZDR_A 1VLI_A 2WQP_A.
Probab=30.74 E-value=1.6e+02 Score=29.90 Aligned_cols=64 Identities=14% Similarity=0.152 Sum_probs=28.6
Q ss_pred HHHHHHHHHcCCCEEEEecccc----HHHHHHHHHHhhcccceeEEeeCCCcccchh-----hhHHHHHHHhCCeE
Q 007643 295 INVLEDAIRGAYPILIIAEDIE----QEALATLVVNKLRGALKIAALKAPGFGERKS-----QYLDDIAILTGGTV 361 (595)
Q Consensus 295 ~~~le~i~~~g~~lvIi~~~i~----~~aL~~L~~n~~~g~~~i~av~~~~~~~~~~-----~~L~~ia~~tGa~i 361 (595)
.++|+++.++|.|+||.++.-+ +.|++.+-.. |..+++.....+....+. ..+..+....|..+
T Consensus 103 ~~lL~~~A~tgkPvIlSTG~stl~EI~~Av~~~~~~---~~~~l~llHC~s~YP~~~e~~NL~~i~~L~~~f~~~v 175 (241)
T PF03102_consen 103 LPLLEYIAKTGKPVILSTGMSTLEEIERAVEVLREA---GNEDLVLLHCVSSYPTPPEDVNLRVIPTLKERFGVPV 175 (241)
T ss_dssp HHHHHHHHTT-S-EEEE-TT--HHHHHHHHHHHHHH---CT--EEEEEE-SSSS--GGG--TTHHHHHHHHSTSEE
T ss_pred HHHHHHHHHhCCcEEEECCCCCHHHHHHHHHHHHhc---CCCCEEEEecCCCCCCChHHcChHHHHHHHHhcCCCE
Confidence 3677788888888888775332 2455555222 333555555444333322 33445555555333
No 49
>PRK13600 putative ribosomal protein L7Ae-like; Provisional
Probab=28.39 E-value=2.6e+02 Score=23.66 Aligned_cols=54 Identities=17% Similarity=0.202 Sum_probs=33.1
Q ss_pred HHHHHHHcCCCEEEEeccccHHHHHHHHHHhhcccceeEEeeCCCcccchhhhHHHHHHHhCCe
Q 007643 297 VLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGT 360 (595)
Q Consensus 297 ~le~i~~~g~~lvIi~~~i~~~aL~~L~~n~~~g~~~i~av~~~~~~~~~~~~L~~ia~~tGa~ 360 (595)
.++.+.+..+.+|++++|+++....-+..---+..++++-| ..+++|.++||..
T Consensus 21 t~Kai~kg~~~~v~iA~Da~~~vv~~l~~lceek~Ip~v~V----------~s~~~LGkAcgi~ 74 (84)
T PRK13600 21 TLKALKKDQVTSLIIAEDVEVYLMTRVLSQINQKNIPVSFF----------KSKHALGKHVGIN 74 (84)
T ss_pred HHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHcCCCEEEE----------CCHHHHHHHhCCC
Confidence 45566666778999999999887664432111112234322 2267888888865
No 50
>COG2089 SpsE Sialic acid synthase [Cell envelope biogenesis, outer membrane]
Probab=23.88 E-value=3.2e+02 Score=29.13 Aligned_cols=64 Identities=19% Similarity=0.171 Sum_probs=32.4
Q ss_pred HHHHHHHHHcCCCEEEEecccc----HHHHHHHHHHhhcccceeEEeeCCCcc-----cchhhhHHHHHHHhCCeE
Q 007643 295 INVLEDAIRGAYPILIIAEDIE----QEALATLVVNKLRGALKIAALKAPGFG-----ERKSQYLDDIAILTGGTV 361 (595)
Q Consensus 295 ~~~le~i~~~g~~lvIi~~~i~----~~aL~~L~~n~~~g~~~i~av~~~~~~-----~~~~~~L~~ia~~tGa~i 361 (595)
.++++++.+.+.|+++.++--+ ++|+..+-.+.. .+++-++..+.. +++-..+.+++...++.+
T Consensus 137 ~plik~iA~~~kPiIlSTGma~~~ei~~av~~~r~~g~---~~i~LLhC~s~YPap~ed~NL~~i~~l~~~Fn~~v 209 (347)
T COG2089 137 LPLIKYIAKKGKPIILSTGMATIEEIEEAVAILRENGN---PDIALLHCTSAYPAPFEDVNLKAIPKLAEAFNAIV 209 (347)
T ss_pred hHHHHHHHhcCCCEEEEcccccHHHHHHHHHHHHhcCC---CCeEEEEecCCCCCCHHHhhHHHHHHHHHHhCCcc
Confidence 4567777777777777664222 345555544432 234444433333 333333555555554433
No 51
>smart00574 POX domain associated with HOX domains.
Probab=20.79 E-value=2.4e+02 Score=26.29 Aligned_cols=38 Identities=13% Similarity=0.076 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHHHHcC-ccccchHHHHHHHHHHHHHhh
Q 007643 442 LRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKE 479 (595)
Q Consensus 442 ~~i~Dal~~~k~al~~g-vVpGGGa~e~~ls~~L~~~~~ 479 (595)
++++--..-++..+..- .|+|.|++-.+.+-+|+..+.
T Consensus 91 ~RY~qY~~qmq~v~ssFe~vaG~g~a~~yt~lAl~a~Sr 129 (140)
T smart00574 91 RRYKHYYEQMQTVVSSFDQAAGLGAAKPYTALALKTISR 129 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Confidence 34443333444444332 678999988888888876653
Done!