Query 007643
Match_columns 595
No_of_seqs 179 out of 1496
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 06:55:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007643.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007643hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1kp8_A Groel protein; chaperon 100.0 8E-119 3E-123 995.2 46.5 513 62-579 1-527 (547)
2 1we3_A CPN60(groel); chaperoni 100.0 6E-118 2E-122 989.5 50.3 528 62-593 1-543 (543)
3 1iok_A Chaperonin 60; chaperon 100.0 5E-119 2E-123 997.9 36.6 526 62-592 2-542 (545)
4 3rtk_A 60 kDa chaperonin 2; he 100.0 2E-118 5E-123 991.0 38.7 515 62-583 1-529 (546)
5 3ruv_A Chaperonin, CPN; double 100.0 1.1E-97 4E-102 829.0 44.5 465 64-581 12-525 (543)
6 1q3q_A Thermosome alpha subuni 100.0 1.2E-96 4E-101 821.4 44.0 480 63-595 15-548 (548)
7 3ko1_A Chaperonin; 9-fold symm 100.0 6.1E-96 2E-100 815.2 46.4 466 63-581 22-539 (553)
8 3p9d_C T-complex protein 1 sub 100.0 5.3E-97 2E-101 826.3 35.2 479 63-577 11-588 (590)
9 1a6d_A Thermosome (alpha subun 100.0 8.7E-96 3E-100 813.9 41.7 462 63-578 14-525 (545)
10 3p9d_A T-complex protein 1 sub 100.0 6.2E-96 2E-100 816.7 39.5 469 63-579 16-552 (559)
11 1a6d_B Thermosome (beta subuni 100.0 7.2E-95 2.5E-99 806.8 45.4 466 63-581 13-529 (543)
12 3iyg_B T-complex protein 1 sub 100.0 4.4E-94 1.5E-98 795.5 48.5 459 64-576 3-512 (513)
13 3iyg_H T-complex protein 1 sub 100.0 1E-93 3.5E-98 792.3 48.2 456 72-575 10-514 (515)
14 3p9d_G T-complex protein 1 sub 100.0 3.9E-95 1.3E-99 808.9 35.4 467 64-581 17-533 (550)
15 3p9d_D T-complex protein 1 sub 100.0 1E-94 3.5E-99 802.5 35.7 460 63-574 11-527 (528)
16 3iyg_A T-complex protein 1 sub 100.0 2.8E-93 9.7E-98 791.7 47.3 463 65-575 4-528 (529)
17 3iyg_E T-complex protein 1 sub 100.0 1.8E-92 6.1E-97 783.4 49.2 458 64-574 3-514 (515)
18 3p9d_B T-complex protein 1 sub 100.0 2.7E-94 9.3E-99 800.0 31.9 464 63-580 9-523 (527)
19 3iyg_D T-complex protein 1 sub 100.0 3.4E-92 1.2E-96 781.2 46.2 454 67-574 7-517 (518)
20 3p9d_E T-complex protein 1 sub 100.0 1.3E-92 4.4E-97 790.5 41.9 468 63-577 37-560 (562)
21 3iyg_G T-complex protein 1 sub 100.0 1.1E-91 3.8E-96 776.6 46.9 453 72-575 8-514 (515)
22 3iyg_Z T-complex protein 1 sub 100.0 3.7E-91 1.3E-95 772.2 46.1 455 66-574 5-516 (517)
23 3iyg_Q T-complex protein 1 sub 100.0 3.6E-91 1.2E-95 772.5 45.0 450 72-574 10-511 (512)
24 3p9d_H T-complex protein 1 sub 100.0 9.2E-92 3.1E-96 784.5 29.5 459 72-583 25-556 (568)
25 3p9d_F T-complex protein 1 sub 100.0 1.2E-90 4.3E-95 773.1 30.4 460 65-577 11-539 (546)
26 3aq1_B Thermosome subunit; gro 100.0 7.7E-88 2.6E-92 743.4 39.1 440 101-592 1-492 (500)
27 3m6c_A 60 kDa chaperonin 1; ch 100.0 3.7E-47 1.3E-51 358.9 15.3 193 248-440 2-194 (194)
28 3osx_A 60 kDa chaperonin; alph 100.0 9.4E-46 3.2E-50 350.0 16.8 189 251-439 12-200 (201)
29 1srv_A Protein (groel (HSP60 c 100.0 6.8E-35 2.3E-39 263.4 14.8 144 253-396 1-144 (145)
30 1gml_A T-complex protein 1 sub 99.8 7.4E-19 2.5E-23 168.1 11.7 136 244-403 1-164 (178)
31 1ass_A Thermosome; chaperonin, 99.8 4.7E-18 1.6E-22 159.5 12.5 127 251-400 1-154 (159)
No 1
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=100.00 E-value=8.2e-119 Score=995.24 Aligned_cols=513 Identities=53% Similarity=0.829 Sum_probs=495.4
Q ss_pred cccccccCCcHHHHHHHHHHHHHHHHhhhhccCcCCCceeeecCCCCcEEecChHHHhccccccCccchHHHHHHHHHHH
Q 007643 62 AAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAA 141 (595)
Q Consensus 62 ~~k~~~f~~~~~~~~~~~~~v~~la~~v~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~l~l~hP~enigakLl~~~a~ 141 (595)
++|++.|| .++|..++.||..|+++|++||||+||||||++++|+|+|||||+||+|+|+++||+|||||||++++|+
T Consensus 1 ~~k~~~~g--~~ar~~~i~~~~~la~~vkttLGPkG~~kmi~~~~G~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~ 78 (547)
T 1kp8_A 1 AAKDVKFG--NDAGVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVAS 78 (547)
T ss_dssp CCEEEEEH--HHHHHHHHHHHHHHHHHHHTTCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHH
T ss_pred CCcccccc--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEEcCHHHHHHHccccChhhhHHHHHHHHHHH
Confidence 37999999 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccCCCcchHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHcccccCCch-HHHHHHhhhcCChhHHH
Q 007643 142 KTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEVG 220 (595)
Q Consensus 142 ~qd~~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~-~L~~va~ts~~~~~~ls 220 (595)
+||+++||||||+|||+++||+++.+++++|+||+.|++||++|++.++++|+++++++++. +|.++|++|++++++|+
T Consensus 79 ~qd~e~GDGTTtvvVLA~~Ll~ea~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~e~l~~vA~iS~~~~~~i~ 158 (547)
T 1kp8_A 79 KANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTVAVEELKALSVPCSDSKAIAQVGTISANSDETVG 158 (547)
T ss_dssp HHHHHHSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCBCCCSHHHHHHHHHHHTTSCHHHH
T ss_pred hhccccCCCcchhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCHHHHHHHHHHhccchhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999877 89999999999999999
Q ss_pred HHHHHHHHhhccCCcEEeeCCCcccceeEEEeeeEEeecccCCccccCcccCcccccCeeEEEecccCCCHHHHHHHHHH
Q 007643 221 NMIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLED 300 (595)
Q Consensus 221 ~li~~Av~~v~~~g~I~v~~G~~~~ds~~li~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~~~~~i~~~le~ 300 (595)
+|+++|+.++++++.|++++|++++||+++++||+|+++|.||||+++|++|+++++||+|+++|++|++++++++++++
T Consensus 159 ~liadAv~~V~~dg~I~Ve~G~~~~ds~~lveG~~fdkg~~~p~~vt~~~~m~~~lenp~Ill~d~~Is~~~~l~~~le~ 238 (547)
T 1kp8_A 159 KLIAEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEA 238 (547)
T ss_dssp HHHHHHHHHHCTTSEEEEECCSSSSCEEEEESCEEESCCBSSTTCCSBTTTTBEEEESCEEECEESEECCGGGTHHHHHH
T ss_pred HHHHHHHHHhCcCCcEEEEeCCccccccEEEecEEEecCccccccccCcccCceEecCceEEEEcCcCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCEEEEeccccHHHHHHHHHHhhcccceeEEeeCCCcccchhhhHHHHHHHhCCeEeecCCCccccCCCCCCcee
Q 007643 301 AIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGN 380 (595)
Q Consensus 301 i~~~g~~lvIi~~~i~~~aL~~L~~n~~~g~~~i~av~~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~ 380 (595)
+.+.|+||||++++|+++|+++|+.|+++|.++|+|||+|+||++++++|+|||++|||++++++.|++++++++++||+
T Consensus 239 i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~rk~~le~ia~~tG~~ii~~~~g~~l~~~~~~~LG~ 318 (547)
T 1kp8_A 239 VAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQ 318 (547)
T ss_dssp HHGGGCCEEEEESEECHHHHHHHHHHGGGTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCEEGGGTCCSTTCCTTTSEE
T ss_pred HHhcCCCEEEECCCcCHHHHHHHHhcccccceeEEEEeccccccccHHHHHHHHHHhCCeEecccccCCcccCCHHHCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEecCeEEEEccCCCchhhhhHHHHHHHHHHhhchHHHHHHHHHHHHHhcCcHHHHH-------------HHHHHH
Q 007643 381 ASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQ-------------LRVEDA 447 (595)
Q Consensus 381 ~~~v~i~~~~~~ii~~~~~~~~i~~r~~~lr~~l~~~~~~~~~e~L~ERi~~l~gg~a~i~-------------~~i~Da 447 (595)
|+.|++++++++|+.+|+++..+..|+.+||.+++.++++|++|+|+||+++|+|++++|. |+++||
T Consensus 319 a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~~~~~tI~vrG~te~~l~E~kr~i~DA 398 (547)
T 1kp8_A 319 AKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDA 398 (547)
T ss_dssp EEEEEECSSCEEEEEECCCHHHHHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHHHCEEEEECCCSSHHHHHHHHHHHHHH
T ss_pred eeEEEEccceEEEEcCCCCHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHhcCCeEEEEEcCCcHhHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999966444 999999
Q ss_pred HHHHHHHHHcCccccchHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhHHHHHHHHhcCCchHHHHHHhhhcCCCce
Q 007643 448 LNATKAAVEEGIVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKY 527 (595)
Q Consensus 448 l~~~k~al~~gvVpGGGa~e~~ls~~L~~~~~~~~~~~q~~~i~~~a~AL~~ip~~L~~NaG~d~~~vi~kl~~~~~~~~ 527 (595)
|+++|+++++|+|||||++|++++.+|++++. .++ ++++++++|++||+.||++||+|||+|+.+++.+|++. +.++
T Consensus 399 l~~~r~av~~giVpGGGa~e~~~s~~L~~~~~-~~g-~~q~~i~~~a~ALe~ip~~la~NaG~d~~~vv~~l~~~-~~~~ 475 (547)
T 1kp8_A 399 LHATRAAVEEGVVAGGGVALIRVASKLADLRG-QNA-DQNVGIKVALRAMEAPLRQIVLNCGEEPSVVANTVKGG-DGNY 475 (547)
T ss_dssp HHHHHHHHHHCEEETTTHHHHHHHHHTTTCCC-SSH-HHHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHHS-CTTE
T ss_pred HHHHHHhccCCEEeCCcHHHHHHHHHHHHHhc-cCc-hHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhc-CCCE
Confidence 99999999999999999999999999998875 444 45699999999999999999999999999999999865 5789
Q ss_pred eeecCCCccccccccCcccchHHHHHHHHHHHHHHHHHhchhHHhhccCCCC
Q 007643 528 GYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPE 579 (595)
Q Consensus 528 Gid~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~~~~ 579 (595)
|||+.+|++.||++.|||||+.||+++|++|+|+|++||++|++|...|+++
T Consensus 476 G~d~~~g~~~dm~~~gI~Dp~~vk~~al~~A~~~A~~iL~id~iI~~~~~~~ 527 (547)
T 1kp8_A 476 GYNAATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKND 527 (547)
T ss_dssp EEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEECCC--
T ss_pred eEeCCCCccccchhcCceechHhHHHHHHHHHHHHHHHHhHhheeecCCccC
Confidence 9999999999999999999999999999999999999999999999988765
No 2
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=100.00 E-value=5.7e-118 Score=989.52 Aligned_cols=528 Identities=53% Similarity=0.830 Sum_probs=496.1
Q ss_pred cccccccCCcHHHHHHHHHHHHHHHHhhhhccCcCCCceeeecCCCCcEEecChHHHhccccccCccchHHHHHHHHHHH
Q 007643 62 AAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAA 141 (595)
Q Consensus 62 ~~k~~~f~~~~~~~~~~~~~v~~la~~v~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~l~l~hP~enigakLl~~~a~ 141 (595)
|+|++.|| .++|..++.||..|+++|++||||+||||||++++|+|+|||||+||+|+|+++||+|||||||++++|+
T Consensus 1 ~~k~~~~g--~~ar~~~~~~~~~la~~vkttLGPkG~~kmi~~~~g~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~ 78 (543)
T 1we3_A 1 MAKILVFD--EAARRALERGVNAVANAVKVTLGPRGRNVVLEKKFGSPTITKDGVTVAKEVELEDHLENIGAQLLKEVAS 78 (543)
T ss_dssp -CEEEEEH--HHHHHHHHHHHHHHHHHHGGGCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHH
T ss_pred CCcccccc--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEEcCHHHHHHHcccCChHHhHHHHHHHHHHH
Confidence 48999999 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccCCCcchHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHcccccCCch-HHHHHHhhhcCChhHHH
Q 007643 142 KTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEVG 220 (595)
Q Consensus 142 ~qd~~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~-~L~~va~ts~~~~~~ls 220 (595)
+||+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++++++. +|.++|++|++ +++|+
T Consensus 79 ~qd~e~GDGTTtvvVLA~~LL~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~l~~vA~iS~~-~~~i~ 157 (543)
T 1we3_A 79 KTNDVAGDGTTTATVLAQAIVREGLKNVAAGANPLALKRGIEKAVEAAVEKIKALAIPVEDRKAIEEVATISAN-DPEVG 157 (543)
T ss_dssp HHHHHHSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCCSHHHHHHHHHHHHT-CHHHH
T ss_pred hhheecCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHhhhhhcC-CHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999877 89999999998 89999
Q ss_pred HHHHHHHHhhccCCcEEeeCCCcccceeEEEeeeEEeecccCCccccCcccCcccccCeeEEEecccCCCHHHHHHHHHH
Q 007643 221 NMIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLED 300 (595)
Q Consensus 221 ~li~~Av~~v~~~g~I~v~~G~~~~ds~~li~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~~~~~i~~~le~ 300 (595)
+|+++|+.+++++|.|++++|++++|++++++||+|+++|+||||++++++|+++++||+|+++|++|++++++++++++
T Consensus 158 ~li~dAv~~V~~~g~I~Ve~G~~~~ds~~lv~G~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~Is~~~~l~~~le~ 237 (543)
T 1we3_A 158 KLIADAMEKVGKEGIITVEESKSLETELKFVEGYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVSNVRELLPILEQ 237 (543)
T ss_dssp HHHHHHHHTTCTTSEEEEEECSSSSCEEEEECSEEESCCBSSGGGCSBTTTTBCCEEEEEEEEESSCBCCHHHHHHHHHH
T ss_pred HHHHHHHHHhCcCCcEEEecCCccccceEEEcCEEEecCccccccccCcccCceeecCceEEEECCCcCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCEEEEeccccHHHHHHHHHHhhcccceeEEeeCCCcccchhhhHHHHHHHhCCeEeecCCCccccCCCCCCcee
Q 007643 301 AIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGN 380 (595)
Q Consensus 301 i~~~g~~lvIi~~~i~~~aL~~L~~n~~~g~~~i~av~~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~ 380 (595)
+.+.|+||||++++|+++|+++|+.|+++|.++|+|||+|+||++++++|+|||++|||++++++.|++++++++++||+
T Consensus 238 i~~~g~~lvii~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~~~le~ia~~tGa~ii~~~~g~~l~~~~~~~LG~ 317 (543)
T 1we3_A 238 VAQTGKPLLIIAEDVEGEALATLVVNKLRGTLSVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGR 317 (543)
T ss_dssp HHTTTCCEEEEESCBCHHHHHHHHHHHHHTSCCEEEEECSSSHHHHHHHHHHHHHHHCCCCBCTTTTCCGGGCCGGGCEE
T ss_pred HHhcCCCEEEEcCCccHHHHHHHHHhccccceeEEEEeccchhhhhHHHHHHHHHHhCCceeeccccCCcccCCHHHCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEecCeEEEEccCCCchhhhhHHHHHHHHHHhhchHHHHHHHHHHHHHhcCcHHHHH-------------HHHHHH
Q 007643 381 ASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQ-------------LRVEDA 447 (595)
Q Consensus 381 ~~~v~i~~~~~~ii~~~~~~~~i~~r~~~lr~~l~~~~~~~~~e~L~ERi~~l~gg~a~i~-------------~~i~Da 447 (595)
|+.|++++++++|+.+|+++..+..|+.+|+.+++.++++|++|+|+||+++|+|++++|. |+++||
T Consensus 318 a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~e~l~erlakl~~~~~tI~lrG~te~~l~E~~r~i~DA 397 (543)
T 1we3_A 318 AERVRITKDETTIVGGKGKKEDIEARINGIKKELETTDSEYAREKLQERLAKLAGGVAVIRVGAATETELKEKKHRFEDA 397 (543)
T ss_dssp EEEEEECSSCEEEEEECCCHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHTTCEEEEEECCSSHHHHHHHHHHHHHH
T ss_pred ceEEEEEcCEEEEEcCCCCHHHHHHHHHHHHHHhhccCchhHHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999976443 999999
Q ss_pred HHHHHHHHHcCccccchHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhHHHHHHHHhcCCchHHHHHHhhhcC-CCc
Q 007643 448 LNATKAAVEEGIVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSD-NHK 526 (595)
Q Consensus 448 l~~~k~al~~gvVpGGGa~e~~ls~~L~~~~~~~~~~~q~~~i~~~a~AL~~ip~~L~~NaG~d~~~vi~kl~~~~-~~~ 526 (595)
|+++|+++++|+|||||++|++++.+|++++.+.++.+ ++++++|++||+.||++||+|||+|+.+++.+|++.| +.+
T Consensus 398 l~~~r~av~~giVpGGGa~e~~~s~~L~~~~~~~~g~~-q~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~ 476 (543)
T 1we3_A 398 LNATRAAVEEGIVPGGGVTLLRAISAVEELIKKLEGDE-ATGAKIVRRALEEPARQIAENAGYEGSVIVQQILAETKNPR 476 (543)
T ss_dssp HHHHHHHHHHCEEETTTHHHHHHHHHHHHHHTTCCHHH-HHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHHCCSCTT
T ss_pred HHHHHHHhccCcCCCccHHHHHHHHHHHHHhhccCchH-HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHhcCCCC
Confidence 99999999999999999999999999999987666654 5999999999999999999999999999999998743 568
Q ss_pred eeeecCCCccccccccCcccchHHHHHHHHHHHHHHHHHhchhHHhhccCCCCCCCCCCCCCCCCCC
Q 007643 527 YGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGY 593 (595)
Q Consensus 527 ~Gid~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~~~~~~~~~~~~~~~~~~ 593 (595)
+|||+.+|++.||++.|||||+.||+++|++|+|+|++||++|++|...|+++|++|++.||+||||
T Consensus 477 ~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id~iI~~~~~~~~~~~~~~~~~~~~~ 543 (543)
T 1we3_A 477 YGFNAATGEFVDMVEAGIVDPAKVTRSALQNAASIGALILTTEAVVAEKPEKKESTPASAGAGDMDF 543 (543)
T ss_dssp EEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEECSCC---------------
T ss_pred EEEeCCCCeecccccCCcCccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccCCCCCCCCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999998887766555556666654
No 3
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=100.00 E-value=4.5e-119 Score=997.87 Aligned_cols=526 Identities=51% Similarity=0.821 Sum_probs=453.6
Q ss_pred cccccccCCcHHHHHHHHHHHHHHHHhhhhccCcCCCceeeecCCCCcEEecChHHHhccccccCccchHHHHHHHHHHH
Q 007643 62 AAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAA 141 (595)
Q Consensus 62 ~~k~~~f~~~~~~~~~~~~~v~~la~~v~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~l~l~hP~enigakLl~~~a~ 141 (595)
|+|++.|| .++|..++.||..|+++|++||||+||||||++++|+|+|||||+||||+|+++||+|||||||++++|+
T Consensus 2 ~~k~~~~g--~~ar~~~i~~~~~la~~vkttLGPkG~~kmi~~~~g~~~iTnDG~tIlk~i~~~hp~en~~Akll~e~a~ 79 (545)
T 1iok_A 2 AAKEVKFN--SDARDRMLKGVNILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELSDKFENMGAQMVREVAS 79 (545)
T ss_dssp CCEEEEEH--HHHHHHHHHHHHHHHHHHGGGCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHH
T ss_pred Cchhhhcc--HHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEECCCCCeEEeCCHHHHHHHhccCChhhHHHHHHHHHHHH
Confidence 58999999 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccCCCcchHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHcccccCCch-HHHHHHhhhcCChhHHH
Q 007643 142 KTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEVG 220 (595)
Q Consensus 142 ~qd~~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~-~L~~va~ts~~~~~~ls 220 (595)
+||+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++++++. +|.++|++|++++++|+
T Consensus 80 ~qd~e~GDGTTtvvVLA~~Ll~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~e~l~~va~iS~~~~~~i~ 159 (545)
T 1iok_A 80 RTNDEAGDGTTTATVLAQAIVREGLKAVAAGMNPMDLKRGIDVATAKVVEAIKSAARPVNDSSEVAQVGTISANGESFIG 159 (545)
T ss_dssp HGGGGCSTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCBCCCSTTTTTHHHHHTTTTCHHHH
T ss_pred hhccccCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHhhcCCchhHH
Confidence 99999999999999999999999999999999999999999999999999999999999876 89999999999999999
Q ss_pred HHHHHHHHhhccCCcEEeeCCCcccceeEEEeeeEEeecccCCccccCcccCcccccCeeEEEecccCCCHHHHHHHHHH
Q 007643 221 NMIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLED 300 (595)
Q Consensus 221 ~li~~Av~~v~~~g~I~v~~G~~~~ds~~li~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~~~~~i~~~le~ 300 (595)
+|+++|+.++++++.|++++|++++||+++++||+|+++|.||||+++|++|+++++||+|+++|++|++++++++++++
T Consensus 160 ~li~dAv~~V~~~g~I~Ve~G~~~~ds~~lveG~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~I~~~~~l~~~le~ 239 (545)
T 1iok_A 160 QQIAEAMQRVGNEGVITVEENKGMETEVEVVEGMQFDRGYLSPYFVTNADKMIAELEDAYILLHEKKLSSLQPMVPLLES 239 (545)
T ss_dssp HHHHHHHHHHCTTSCCCCEECSSSCCEEEEECCEECSCCCSCGGGCCCSSSSCEEEEEEEEEECSSCBCCCCC-------
T ss_pred HHHHHHHHHhccCCeEEEEeCCccccceEEEecEEEecCccccccccCcccCceeecCCeEEEEcCCcCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCEEEEeccccHHHHHHHHHHhhcccceeEEeeCCCcccchhhhHHHHHHHhCCeEeecCCCccccCCCCCCcee
Q 007643 301 AIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGN 380 (595)
Q Consensus 301 i~~~g~~lvIi~~~i~~~aL~~L~~n~~~g~~~i~av~~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~ 380 (595)
+.+.|+||||++++|+++|+++|+.|+++|.++|+|||+|+||++++++|+|||++|||+++++++|++++++++++||+
T Consensus 240 i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~~~le~ia~~tGa~ii~~~~~~~l~~~~~~~LG~ 319 (545)
T 1iok_A 240 VIQSQKPLLIVAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLQDIAILTGGQVISEDLGMKLENVTIDMLGR 319 (545)
T ss_dssp ----CCCCEEEESCBC-----------------CEEEECSCCTTHHHHHHHHHHHHHTC---------------CTTSEE
T ss_pred HHhcCCCEEEECCCcCHHHHHHHHHccccccceeEEEecchhhhccHHHHHHHHHhcCCeeecccccCCcccCCHHHcCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEecCeEEEEccCCCchhhhhHHHHHHHHHHhhchHHHHHHHHHHHHHhcCcHHHHH-------------HHHHHH
Q 007643 381 ASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQ-------------LRVEDA 447 (595)
Q Consensus 381 ~~~v~i~~~~~~ii~~~~~~~~i~~r~~~lr~~l~~~~~~~~~e~L~ERi~~l~gg~a~i~-------------~~i~Da 447 (595)
|++|++++++|+|+.+|+++..+..|+.+|+.+++.++++|++|+|+||+++|+|++++|. |+++||
T Consensus 320 a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~~~~~tI~lrG~te~~l~E~kr~i~DA 399 (545)
T 1iok_A 320 AKKVSINKDNTTIVDGAGEKAEIEARVSQIRQQIEETTSDYDREKLQERVAKLAGGVAVIRVGGMTEIEVKERKDRVDDA 399 (545)
T ss_dssp EEEEEECSSCEEEESCCCCHHHHHHHHHHHHHHHTTCCCSSHHHHHHHHHHTTSSCEEEEEECCSSHHHHHHHHHHHHHH
T ss_pred CcEEEEecCEEEEEeCCCCHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999976443 999999
Q ss_pred HHHHHHHHHcCccccchHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhHHHHHHHHhcCCchHHHHHHhhhcCCCce
Q 007643 448 LNATKAAVEEGIVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKY 527 (595)
Q Consensus 448 l~~~k~al~~gvVpGGGa~e~~ls~~L~~~~~~~~~~~q~~~i~~~a~AL~~ip~~L~~NaG~d~~~vi~kl~~~~~~~~ 527 (595)
|+++|+++++|+|||||++|++++.+|++++. .++ ++++++++|++||+.||++||+|||+|+.+++.+|++.|++++
T Consensus 400 l~~~r~av~~giVpGGGa~e~~~s~~L~~~~~-~~g-~~q~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~~~~~~ 477 (545)
T 1iok_A 400 LNATRAAVQEGIVVGGGVALVQGAKVLEGLSG-ANS-DQDAGIAIIRRALEAPMRQIAENAGVDGAVVAGKVRESSDKAF 477 (545)
T ss_dssp HHHHHHHHHHCEEETTTHHHHHHGGGGGSCCC-SSH-HHHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHSCCSTTE
T ss_pred HHHHHHHhhcCCCCCchHHHHHHHHHHHHHhc-cCc-hHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhcCCCe
Confidence 99999999999999999999999999998875 445 4559999999999999999999999999999999997667789
Q ss_pred eeecCCCccccccccCcccchHHHHHHHHHHHHHHHHHhchhHHhhccCCCCCCCCCC-CCCCCCC
Q 007643 528 GYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAG-NPMDNSG 592 (595)
Q Consensus 528 Gid~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~~~~~~~~~~-~~~~~~~ 592 (595)
|||+.+|++.||++.|||||+.||+++|++|+|+|++||++|++|...|+++++ ++| ++|+|||
T Consensus 478 G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~A~~iL~id~iI~~~~~~~~~-~~~~~~~~~~~ 542 (545)
T 1iok_A 478 GFNAQTEEYGDMFKFGVIDPAKVVRTALEDAASVAGLLITTEAMIAEKPEPKAP-AGGMPDMGGMG 542 (545)
T ss_dssp EEETTTTEEEEHHHHTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEECC-----------------
T ss_pred eEeCCCCcccchHhcCcEEccHHHHHHHHHHHHHHHHHHhHHHhhccCCccCCC-CCCCCCCCCCC
Confidence 999999999999999999999999999999999999999999999998876543 222 3566666
No 4
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=100.00 E-value=1.5e-118 Score=990.97 Aligned_cols=515 Identities=55% Similarity=0.818 Sum_probs=417.2
Q ss_pred cccccccCCcHHHHHHHHHHHHHHHHhhhhccCcCCCceeeecCCCCcEEecChHHHhccccccCccchHHHHHHHHHHH
Q 007643 62 AAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAA 141 (595)
Q Consensus 62 ~~k~~~f~~~~~~~~~~~~~v~~la~~v~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~l~l~hP~enigakLl~~~a~ 141 (595)
|+|+|.|| +++|..|+.|++.|+++|++||||+||||||++++|+|+|||||+||||+|+++||++||||||++++|+
T Consensus 1 ~~k~~~~~--~~ar~~~~~~~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hp~~n~gAkll~e~a~ 78 (546)
T 3rtk_A 1 MAKTIAYD--EEARRGLERGLNALADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIELEDPYEKIGAELVKEVAK 78 (546)
T ss_dssp --------------------------------------------------------------CCCHHHHHHHHHHHHHHT
T ss_pred CCceeecc--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEECcHHHHHHHccCCChhhhHHHHHHHHHHH
Confidence 58999999 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccCCCcchHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHcccccCCch-HHHHHHhhhcCChhHHH
Q 007643 142 KTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEVG 220 (595)
Q Consensus 142 ~qd~~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~-~L~~va~ts~~~~~~ls 220 (595)
+||+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|+++. +|.++|++|++ +++++
T Consensus 79 ~qd~e~GDGTTtvvVLAgeLL~ea~~li~~GihP~~I~~G~~~A~~~a~e~L~~~s~~v~~~e~L~~vA~iS~~-~~~i~ 157 (546)
T 3rtk_A 79 KTDDVAGDGTTTATVLAQALVREGLRNVAAGANPLGLKRGIEKAVEKVTETLLKGAKEVETKEQIAATAAISAG-DQSIG 157 (546)
T ss_dssp SCC-------CHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCCSHHHHHHHHHHHHT-CHHHH
T ss_pred hhhhhhCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCChHHHHhHeEEeCC-chHHH
Confidence 99999999999999999999999999999999999999999999999999999999999877 89999999998 88999
Q ss_pred HHHHHHHHhhccCCcEEeeCCCcccceeEEEeeeEEeecccCCccccCcccCcccccCeeEEEecccCCCHHHHHHHHHH
Q 007643 221 NMIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLED 300 (595)
Q Consensus 221 ~li~~Av~~v~~~g~I~v~~G~~~~ds~~li~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~~~~~i~~~le~ 300 (595)
+++++|+.+++++|+|+++.+++..+..++++||+|+++|+||||++++++|+++++||+|+++|++|++++++++++++
T Consensus 158 ~liadAv~~V~~dgvI~Ve~~~~~~~ds~lveGm~fdkg~~sp~~vt~~e~m~~~len~kIll~d~kIs~~~~l~~~le~ 237 (546)
T 3rtk_A 158 DLIAEAMDKVGNEGVITVEESNTFGLQLELTEGMRFDKGYISGYFVTDPERQEAVLEDPYILLVSSKVSTVKDLLPLLEK 237 (546)
T ss_dssp HHHHHHHHHSCTTSEEEEECCSSSSCEEEEECEEEESCCBSSGGGCSBTTTTBEEEESCEEEEBSSEECCSTTTHHHHHH
T ss_pred HHHHHHHHHhccCCceEEEecCCcccceEEeeeEEEcCCccCcccccCcccCeeEecccEEEEECCccCCHHHHHHHHHH
Confidence 99999999999999999988877654459999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCEEEEeccccHHHHHHHHHHhhcccceeEEeeCCCcccchhhhHHHHHHHhCCeEeecCCCccccCCCCCCcee
Q 007643 301 AIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGN 380 (595)
Q Consensus 301 i~~~g~~lvIi~~~i~~~aL~~L~~n~~~g~~~i~av~~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~ 380 (595)
+.+.|+||||++++|+++||++|+.|+++|+++++|||+|+|++.++.+|+|||++|||+++++++|++++++++++||+
T Consensus 238 I~~~g~~lvIi~~~I~~~Al~~L~~n~lrg~~~v~aVk~~~~~~~rk~~le~ia~~tG~~ii~~~~~~~l~~~~~~~LG~ 317 (546)
T 3rtk_A 238 VIGAGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAMLQDMAILTGGQVISEEVGLTLENADLSLLGK 317 (546)
T ss_dssp HHTTTCCEEEEESEECHHHHHHHHHHHHHSSCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCSSSSCCSTTCCTTTSEE
T ss_pred HHhcCCCEEEEcCCCCHHHHHHHHHhCCCCceEEEEeccccccccchhhHHHHHHHhCCEEeeccccCccccCCHhhCCe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEecCeEEEEccCCCchhhhhHHHHHHHHHHhhchHHHHHHHHHHHHHhcCcHHHHH-------------HHHHHH
Q 007643 381 ASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQ-------------LRVEDA 447 (595)
Q Consensus 381 ~~~v~i~~~~~~ii~~~~~~~~i~~r~~~lr~~l~~~~~~~~~e~L~ERi~~l~gg~a~i~-------------~~i~Da 447 (595)
|++|+++++.++|+.+|+++..++.|+.+||.++++++++|++|+|+||+++|+||+++|. |+++||
T Consensus 318 a~~v~i~~d~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~g~~atI~vrG~te~~l~E~er~l~DA 397 (546)
T 3rtk_A 318 ARKVVVTKDETTIVEGAGDTDAIAGRVAQIRQEIENSDSDYDREKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDA 397 (546)
T ss_dssp EEEEEECSSCEEEEEECSCHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHCEEEEECCCCSSTHHHHHHHHHHHH
T ss_pred eEEEEEcCCeEEEEcCCCCHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEeCCCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999976544 999999
Q ss_pred HHHHHHHHHcCccccchHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhHHHHHHHHhcCCchHHHHHHhhhcCCCce
Q 007643 448 LNATKAAVEEGIVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKY 527 (595)
Q Consensus 448 l~~~k~al~~gvVpGGGa~e~~ls~~L~~~~~~~~~~~q~~~i~~~a~AL~~ip~~L~~NaG~d~~~vi~kl~~~~~~~~ 527 (595)
||++|+++++|+|||||++|++++.+|++++ .++.+ ++++++|++||+.||++||+|||+|+.+++.+|++. ..++
T Consensus 398 l~a~r~av~~giVpGGGa~e~~~s~~L~~~~--~~g~e-q~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~-~~~~ 473 (546)
T 3rtk_A 398 VRNAKAAVEEGIVAGGGVTLLQAAPTLDELK--LEGDE-ATGANIVKVALEAPLKQIAFNSGLEPGVVAEKVRNL-PAGH 473 (546)
T ss_dssp HHHHHHHHHHCEEETTTHHHHTTGGGSTTSC--CCTTH-HHHHHHHHHHTTHHHHHHHTTTTCCHHHHHHHHHHS-CTTE
T ss_pred HHHHHHHHhCCcccCCcHHHHHHHHHHHHhc--cccHH-HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhh-cCCE
Confidence 9999999999999999999999999999887 55554 599999999999999999999999999999999875 4569
Q ss_pred eeecCCCccccccccCcccchHHHHHHHHHHHHHHHHHhchhHHhhccCCCCCCCC
Q 007643 528 GYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMP 583 (595)
Q Consensus 528 Gid~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~~~~~~~~ 583 (595)
|||+.+|++.||++.|||||+.||+++|++|+|+|++|||+|++|...|+++|++|
T Consensus 474 G~d~~~g~~~Dm~~~gI~dp~~vk~~al~~A~e~A~~iL~id~iI~~~~~~~~~~~ 529 (546)
T 3rtk_A 474 GLNAQTGVYEDLLAAGVADPVKVTRSALQNAASIAGLFLTTEAVVADKPEKEKASV 529 (546)
T ss_dssp ECCSSSCCCEETTTTTCEEEHHHHHHHHHHHHHHHHHHHHCC--------------
T ss_pred eEcCCCCcEeeHHHcCCEecHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999988776533
No 5
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=100.00 E-value=1.1e-97 Score=828.98 Aligned_cols=465 Identities=26% Similarity=0.378 Sum_probs=415.4
Q ss_pred cccccCCcHHHHHHHHHHHHHHHHhhhhccCcCCCceeeecCCCCcEEecChHHHhccccccCccchHHHHHHHHHHHhc
Q 007643 64 KDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKT 143 (595)
Q Consensus 64 k~~~f~~~~~~~~~~~~~v~~la~~v~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~l~l~hP~enigakLl~~~a~~q 143 (595)
.+-.+| .++|..|+.||..|+++|++||||+||||||++++|+|+|||||+||||+|+++||+ |||++++|++|
T Consensus 12 ~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~q 85 (543)
T 3ruv_A 12 MKRYMG--RDAQRMNILAGRIIAETVRSTLGPKGMDKMLVDDLGDVVVTNDGVTILREMSVEHPA----AKMLIEVAKTQ 85 (543)
T ss_dssp EEEEET--HHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECTTSCEEEECCHHHHHHHSCCCCHH----HHHHHHHHHHH
T ss_pred cchhcc--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHH----HHHHHHHHHHH
Confidence 455677 899999999999999999999999999999999999999999999999999999998 99999999999
Q ss_pred ccccCCCcchHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHcccccCC--ch-HHHHHHhhhcCC-----
Q 007643 144 NDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE--DS-ELADVAAVSAGN----- 215 (595)
Q Consensus 144 d~~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~--~~-~L~~va~ts~~~----- 215 (595)
|+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|++++++++ +. +|.++|+||+++
T Consensus 86 d~e~GDGTTtvvVLA~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~~~L~~va~tsl~sK~~~~ 165 (543)
T 3ruv_A 86 EKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQELLKTIACEVGAQDKEILTKIAMTSITGKGAEK 165 (543)
T ss_dssp HHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTCHHHHHHHHHHHHHHTCGGG
T ss_pred HhhhCCCcccHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHhcccccch
Confidence 9999999999999999999999999999999999999999999999999999999887 45 899999999864
Q ss_pred -hhHHHHHHHHHHHhhccC-Cc-----EEee--CCCcccceeEEEeeeEEeecccCCccccCcccCcccccCeeEEEecc
Q 007643 216 -NYEVGNMIAEAMSKVGRK-GV-----VTLE--EGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDK 286 (595)
Q Consensus 216 -~~~ls~li~~Av~~v~~~-g~-----I~v~--~G~~~~ds~~li~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~ 286 (595)
+++|++|+++|+.+++++ |. |+++ .|+++.|+ ++++||+|+++|.||| |+++++||+|+++|+
T Consensus 166 ~~~~i~~livdAv~~V~~~~g~~dl~~I~V~k~~Gg~~~ds-~lv~G~v~dk~~~~~~-------m~~~~~n~kIll~~~ 237 (543)
T 3ruv_A 166 AKEKLAEIIVEAVSAVVDDEGKVDKDLIKIEKKSGASIDDT-ELIKGVLVDKERVSAQ-------MPKKVTDAKIALLNC 237 (543)
T ss_dssp CCHHHHHHHHHHHHHHCCTTSCCCGGGEEEEEEECSCGGGC-EEESSEEESCCCSCTT-------SCSEEEEEEEEEESS
T ss_pred hHHHHHHHHHHHHHHhhccCCCcccceEEEEEcCCCCcccc-eeecceEEeccccCcc-------ccccccCcEEEEEcc
Confidence 789999999999999987 64 6654 89999998 9999999999999998 466899999999998
Q ss_pred c-------------CCCHHH-----------HHHHHHHHHHcCCCEEEEeccccHHHHHHHHHHhhcccceeEEeeCCCc
Q 007643 287 K-------------ITNARD-----------LINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGF 342 (595)
Q Consensus 287 ~-------------i~~~~~-----------i~~~le~i~~~g~~lvIi~~~i~~~aL~~L~~n~~~g~~~i~av~~~~~ 342 (595)
+ |+++++ +.++++++.+.|+||||++++|+++++++|..+ +|++|+
T Consensus 238 ~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~ve~I~~~g~~vvi~~~~I~~~al~~L~~~------gI~~v~---- 307 (543)
T 3ruv_A 238 AIEIKETETDAEIRITDPAKLMEFIEQEEKMLKDMVAEIKASGANVLFCQKGIDDLAQHYLAKE------GIVAAR---- 307 (543)
T ss_dssp CBSCCCCSSCCCEEECSTTHHHHHHHHHHHHHHHHHHHHHHHTCSEEEESSCBCHHHHHHHHHT------TCEEEC----
T ss_pred cccccccccCceeEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCCccHHHHHHHHHc------CcEEEe----
Confidence 4 667665 566789999999999999999999999999854 456776
Q ss_pred ccchhhhHHHHHHHhCCeEeecCCCccccCCCCCCceeeeEEEEe---cCeEEEEccCCCchhhhhHHHHHHHHHHhhch
Q 007643 343 GERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLT---KDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQ 419 (595)
Q Consensus 343 ~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i~---~~~~~ii~~~~~~~~i~~r~~~lr~~l~~~~~ 419 (595)
++++.+|+|||++|||++++ +++++++++||+|+.|++. +++++|+.+|+++..++. .| .+++.
T Consensus 308 -~v~k~~le~ia~~tGa~iis-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~~~TI---~l----rG~te 374 (543)
T 3ruv_A 308 -RVKKSDMEKLAKATGANVIA-----AIAALSAQDLGDAGLVEERKISGDSMIFVEECKHPKAVTM---LI----RGTTE 374 (543)
T ss_dssp -SCCHHHHHHHHHHHCCCEES-----CGGGCCGGGCEEEEEEEEEEETTEEEEEEECCSSCSSEEE---EE----EESSH
T ss_pred -eCCHHHHHHHHHHhCCceec-----ccccCCHHHCCcccEEEEEEeCCceEEEEECCCCCceeEE---Ee----cCCCH
Confidence 67899999999999999999 6899999999999999854 899999999988776542 23 33443
Q ss_pred HHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHcC-ccccchHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHh
Q 007643 420 DYEREKLNERIAKLSGGVAVIQLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALC 498 (595)
Q Consensus 420 ~~~~e~L~ERi~~l~gg~a~i~~~i~Dal~~~k~al~~g-vVpGGGa~e~~ls~~L~~~~~~~~~~~q~~~i~~~a~AL~ 498 (595)
...+| . +|+++||||++|+++++| +|||||++|++++.+|++++.++++.+| +++++|++||+
T Consensus 375 ~~l~E-~--------------kr~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq-~~i~~~a~ALe 438 (543)
T 3ruv_A 375 HVIEE-V--------------ARAVDDAVGVVGCTIEDGRIVSGGGSTEVELSMKLREYAEGISGREQ-LAVRAFADALE 438 (543)
T ss_dssp HHHHH-H--------------HHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHTCCTTHH-HHHHHHHHHHT
T ss_pred HHHHH-H--------------HHHHHHHHHHHHHHHhcCCeecCCcHHHHHHHHHHHHHhhcCChHHH-HHHHHHHHHHH
Confidence 33222 2 289999999999999999 9999999999999999999987777665 89999999999
Q ss_pred HHHHHHHHhcCCchHHHHHHhhhcC----CCceeeecCCCccccccccCcccchHHHHHHHHHHHHHHHHHhchhHHhhc
Q 007643 499 YPLKLIAKNAGVNGSVVSEKVLSSD----NHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVE 574 (595)
Q Consensus 499 ~ip~~L~~NaG~d~~~vi~kl~~~~----~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~~ 574 (595)
.||++||+|||+|+.+++.+|++.| ++++|||+.+|++.||++.|||||+.||+++|++|+|+|++|||||++|..
T Consensus 439 ~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~a~~iL~id~ii~~ 518 (543)
T 3ruv_A 439 VIPRTLAENAGLDAIEILVKVRAAHASNGNKCAGLNVFTGAVEDMCENGVVEPLRVKTQAIQSAAESTEMLLRIDDVIAA 518 (543)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHTTTCCTTEEECTTTCSEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHhhcCCceeeeeCCCCccccHHHcCCEecHHHHHHHHHHHHHHHHHHHhHHhheec
Confidence 9999999999999999999998743 468999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCC
Q 007643 575 IKEPEPA 581 (595)
Q Consensus 575 ~~~~~~~ 581 (595)
.|+++|+
T Consensus 519 ~~~~~~~ 525 (543)
T 3ruv_A 519 EKLRGAP 525 (543)
T ss_dssp C------
T ss_pred CccCCCC
Confidence 8876654
No 6
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=100.00 E-value=1.2e-96 Score=821.36 Aligned_cols=480 Identities=24% Similarity=0.357 Sum_probs=419.6
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhhccCcCCCceeeecCCCCcEEecChHHHhccccccCccchHHHHHHHHHHHh
Q 007643 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (595)
Q Consensus 63 ~k~~~f~~~~~~~~~~~~~v~~la~~v~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~l~l~hP~enigakLl~~~a~~ 142 (595)
+++..|| +++|..|+.||..|+++|+|||||+||||||++++|+|+|||||+||||+|+++||+ |||++++|++
T Consensus 15 ~~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~ 88 (548)
T 1q3q_A 15 GTQRYVG--RDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDCATILDKIDLQHPA----AKMMVEVAKT 88 (548)
T ss_dssp TCEEEEH--HHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECTTCCEEEESCHHHHHHHSCCCSHH----HHHHHHHHHH
T ss_pred Ccceech--HHHHHHHHHHHHHHHHHHHhccCCCCceEEEEcCCCCeEEECCHHHHHHHhhccchH----HHHHHHHHHh
Confidence 5778899 999999999999999999999999999999999999999999999999999999998 9999999999
Q ss_pred cccccCCCcchHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHcccccCCc--h-HHHHHHhhhcC-----
Q 007643 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED--S-ELADVAAVSAG----- 214 (595)
Q Consensus 143 qd~~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~~--~-~L~~va~ts~~----- 214 (595)
||+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|++++++++. . +|.++|+|+++
T Consensus 89 qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~~~l~~va~tsl~sKi~~ 168 (548)
T 1q3q_A 89 QDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIITKGYALAAEKAQEILDEIAIRVDPDDEETLLKIAATSITGKNAE 168 (548)
T ss_dssp HHHHTSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTCHHHHHHHHHHHSCSSTTG
T ss_pred cCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhccccc
Confidence 999999999999999999999999999999999999999999999999999999999874 4 89999998854
Q ss_pred -ChhHHHHHHHHHHHhhccC--C-------cEEee--CCCcccceeEEEeeeEEeecccCCccccCcccCcccccCeeEE
Q 007643 215 -NNYEVGNMIAEAMSKVGRK--G-------VVTLE--EGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLL 282 (595)
Q Consensus 215 -~~~~ls~li~~Av~~v~~~--g-------~I~v~--~G~~~~ds~~li~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Il 282 (595)
++++|++|+++|+.+++++ | .|+++ +|++++|| ++++||+|+++|.|||| +++++||+|+
T Consensus 169 ~~~~~i~~livdAv~~V~~~~~g~~~~d~~~I~V~k~~G~~~~ds-~lv~G~v~dk~~~~~~m-------~~~ien~kIl 240 (548)
T 1q3q_A 169 SHKELLAKLAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEES-ELVRGVVIDKEVVHPRM-------PKRVENAKIA 240 (548)
T ss_dssp GGHHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEEEEBSCGGGC-EEESSEEESCCCSSTTS-------CSEESSEEEE
T ss_pred cchHHHHHHHHHHHHHhccccCCCccccCCeEEEEEecCCCccce-EEEeeEEEeccCCCCCC-------cceecCCEEE
Confidence 4689999999999999876 4 67765 99999999 99999999999999985 4578999999
Q ss_pred Eeccc-------------CCCHHHH-----------HHHHHHHHHcCCCEEEEeccccHHHHHHHHHHhhcccceeEEee
Q 007643 283 LVDKK-------------ITNARDL-----------INVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALK 338 (595)
Q Consensus 283 l~d~~-------------i~~~~~i-----------~~~le~i~~~g~~lvIi~~~i~~~aL~~L~~n~~~g~~~i~av~ 338 (595)
++|++ |++++++ .++++++.+.|+||||++++|+++|+++|..| +|+||+
T Consensus 241 l~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~------~I~av~ 314 (548)
T 1q3q_A 241 LINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKY------GIMAVR 314 (548)
T ss_dssp EECSCBSCCCCSSCCCEEECSHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEESSCBCHHHHHHHHHT------TCEEEC
T ss_pred EEecCcCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCcCEEEEcCCcCHHHHHHHHHC------CcEEEc
Confidence 99998 8888876 77899999999999999999999999999987 467775
Q ss_pred CCCcccchhhhHHHHHHHhCCeEeecCCCccccCCCCCCceeeeEEEE---ecCeEEEEccCCCchhhhhHHHHHHHHHH
Q 007643 339 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL---TKDTTTIVGDGSTQDAVSKRVAQIRTLIE 415 (595)
Q Consensus 339 ~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i---~~~~~~ii~~~~~~~~i~~r~~~lr~~l~ 415 (595)
++++++|+|||++|||++++ +++++++++||+|+.|++ ++++|+|+.+|++....+. .| .
T Consensus 315 -----~~~k~~le~ia~~tGa~ii~-----~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI---~l----r 377 (548)
T 1q3q_A 315 -----RVKKSDMEKLAKATGAKIVT-----NVKDLTPEDLGYAEVVEERKLAGENMIFVEGCKNPKAVTI---LI----R 377 (548)
T ss_dssp -----SCCHHHHHHHHHHHCCCCBS-----SGGGCCGGGCEEESEEEEEEETTEEEEEEECCSSCSSEEE---EE----E
T ss_pred -----cCCHHHHHHHHHHhCCeEec-----ccccCCHHHCCCceEEEEEEecCceEEEEecCCCCCeEEE---EE----C
Confidence 78899999999999999998 699999999999999985 4899999999887655432 23 3
Q ss_pred hhchHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHcC-ccccchHHHHHHHHHHHHHhhcCCchhHHHHHHHHH
Q 007643 416 NAEQDYEREKLNERIAKLSGGVAVIQLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVK 494 (595)
Q Consensus 416 ~~~~~~~~e~L~ERi~~l~gg~a~i~~~i~Dal~~~k~al~~g-vVpGGGa~e~~ls~~L~~~~~~~~~~~q~~~i~~~a 494 (595)
+++. ++.+ | ++|+++||++++|+++++| +|||||++|++++.+|++++.+.++.+ ++++++|+
T Consensus 378 G~te-~~l~---E-----------~er~l~DAl~~~r~a~~~~~ivpGGGa~e~~~~~~L~~~~~~~~g~~-q~~i~~~a 441 (548)
T 1q3q_A 378 GGTE-HVID---E-----------VERALEDAVKVVKDVMEDGAVLPAGGAPEIELAIRLDEYAKQVGGKE-ALAIENFA 441 (548)
T ss_dssp ESSH-HHHH---H-----------HHHHHHHHHHHHHHHHHSCEEEECTTHHHHHHHHHHHHHHHHHCHHH-HHHHHHHH
T ss_pred CCCh-HHHH---H-----------HHHHHHHHHHHHHHHHHCCCcccCCcHHHHHHHHHHHHHhhhcCCcH-HHHHHHHH
Confidence 3443 3322 2 2289999999999999999 999999999999999999987766655 48999999
Q ss_pred HHHhHHHHHHHHhcCCchHHHHHHhhhcC---CCceeeecCCCccccccccCcccchHHHHHHHHHHHHHHHHHhchhHH
Q 007643 495 RALCYPLKLIAKNAGVNGSVVSEKVLSSD---NHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCV 571 (595)
Q Consensus 495 ~AL~~ip~~L~~NaG~d~~~vi~kl~~~~---~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~i 571 (595)
+||+.||++||+|||+|+.+++.+|++.| +.++|||+.+|++.||++.|||||+.||+++|++|+|+|++|||||++
T Consensus 442 ~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~i 521 (548)
T 1q3q_A 442 DALKIIPKTLAENAGLDTVEMLVKVISEHKNRGLGIGIDVFEGKPADMLEKGIIEPLRVKKQAIKSASEAAIMILRIDDV 521 (548)
T ss_dssp HHTTHHHHHHHHHTTCCHHHHHHHHHHHHHHHCTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcceeCCCCCccchhhcCCEecHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998643 468999999999999999999999999999999999999999999999
Q ss_pred hhccCCCCCCC---CCCCCCCCCCCCC
Q 007643 572 VVEIKEPEPAM---PAGNPMDNSGYGY 595 (595)
Q Consensus 572 I~~~~~~~~~~---~~~~~~~~~~~~~ 595 (595)
|...|++++.+ ++++||+||.+||
T Consensus 522 I~~~~~~~~~~~~~~~~~~~~g~~~~~ 548 (548)
T 1q3q_A 522 IAAKATKPEGGQGGGMPGGMGGMDMGM 548 (548)
T ss_dssp EECCC----------------------
T ss_pred HhcCCcCCCCCCCCCCCCCCCCCCCCC
Confidence 99987654321 1234566665664
No 7
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=100.00 E-value=6.1e-96 Score=815.21 Aligned_cols=466 Identities=22% Similarity=0.376 Sum_probs=413.1
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhhccCcCCCceeeecCCCCcEEecChHHHhccccccCccchHHHHHHHHHHHh
Q 007643 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (595)
Q Consensus 63 ~k~~~f~~~~~~~~~~~~~v~~la~~v~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~l~l~hP~enigakLl~~~a~~ 142 (595)
+.+..|| .++|..|+.||..|+++|++||||+||||||++++|+|+|||||+||||+|+++||+ |||++++|++
T Consensus 22 ~~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~ 95 (553)
T 3ko1_A 22 GSSRTYG--KEAVRANIAAVKAVEEALKSTYGPRGMDKMLVDSLGDITITNDGATILDKMDLQHPA----AKLLVQIAKG 95 (553)
T ss_dssp ------C--HHHHHHHHHHHHHHHHHHGGGCSTTCCEEEEECTTSCEEEECCHHHHHHSSCCCSHH----HHHHHHHHHT
T ss_pred Ccccchh--HHHHHHHHHHHHHHHHHHHhccCCcchhhHHHhhccceEEecCccchhhhhhccChh----HHHHHHHhhC
Confidence 3456678 899999999999999999999999999999999999999999999999999999998 9999999999
Q ss_pred cccccCCCcchHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHcccccCC--ch-HHHHHHhhhcCC----
Q 007643 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE--DS-ELADVAAVSAGN---- 215 (595)
Q Consensus 143 qd~~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~--~~-~L~~va~ts~~~---- 215 (595)
||+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|++++++++ +. +|.++|+||+++
T Consensus 96 qd~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~e~L~~vA~tsl~sK~~~ 175 (553)
T 3ko1_A 96 QDEETADGTKTAVIFSGELVKKAEDLLYKDVHPTIIISGYKKAEEVALQTIQELAQTVSINDTDLLRKIAMTSLSSKAVA 175 (553)
T ss_dssp CSSSSSTTHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCEECCTTCHHHHHHHHHHHHTTSSCC
T ss_pred CcccccCCceeEEEehHHHHHhHHHHHhcCCCceEEehhhhHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHhhHHhhh
Confidence 99999999999999999999999999999999999999999999999999999999887 45 899999999875
Q ss_pred --hhHHHHHHHHHHHhhccC--Cc-------EEee--CCCcccceeEEEeeeEEeecccCCccccCcccCcccccCeeEE
Q 007643 216 --NYEVGNMIAEAMSKVGRK--GV-------VTLE--EGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLL 282 (595)
Q Consensus 216 --~~~ls~li~~Av~~v~~~--g~-------I~v~--~G~~~~ds~~li~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Il 282 (595)
+++|++|+++|+.+++++ |. |+++ .|+++.|+ ++++||+|+++|.||| |+++++||||+
T Consensus 176 ~~~~~i~~livdAv~~V~~~~~G~~~~dl~~I~I~k~~Gg~~~ds-~lv~G~v~dk~~~~~~-------m~~~ien~kIl 247 (553)
T 3ko1_A 176 GAREYIADIVVKAVTQVAELRGDKWYVDLDNIQIVKKAGGSINDT-QLVYGIVVDKEVVHPG-------MPKRLENAKIA 247 (553)
T ss_dssp TTHHHHHHHHHHHHHHHCCCTTSSCCCCGGGEEEEECCCSCGGGC-EEESEEEECSCBSCTT-------SCSCCBSCEEE
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCceEEechhHHHHHHhCCccccc-eeeEEEEecccccCCC-------CccccccceEE
Confidence 789999999999999875 65 6654 89899998 9999999999999998 46689999999
Q ss_pred Eecc-------------cCCCHHH-----------HHHHHHHHHHcCCCEEEEeccccHHHHHHHHHHhhcccceeEEee
Q 007643 283 LVDK-------------KITNARD-----------LINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALK 338 (595)
Q Consensus 283 l~d~-------------~i~~~~~-----------i~~~le~i~~~g~~lvIi~~~i~~~aL~~L~~n~~~g~~~i~av~ 338 (595)
++|+ +|+++++ +.++++++.+.|+||||++++|+++++++|..+ +|++|+
T Consensus 248 l~d~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~vekI~~~g~~vvI~~~~I~~~al~~L~~~------gI~~v~ 321 (553)
T 3ko1_A 248 LIDASLEVEKPELDAEIRINDPTQMQKFLDEEENLIKEKVDKILATGANVIICQKGIDEVAQSYLAKK------GVLAVR 321 (553)
T ss_dssp EECSCBSCCCCTTTCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECSSCBCSHHHHHHHHH------TCEEEC
T ss_pred EecCcccccCcccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhcceEEEeccChHHHHHHHHHhc------chhhhh
Confidence 9998 4778877 456789999999999999999999999999864 456765
Q ss_pred CCCcccchhhhHHHHHHHhCCeEeecCCCccccCCCCCCceeeeEEEE---ecCeEEEEccCCCchhhhhHHHHHHHHHH
Q 007643 339 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL---TKDTTTIVGDGSTQDAVSKRVAQIRTLIE 415 (595)
Q Consensus 339 ~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i---~~~~~~ii~~~~~~~~i~~r~~~lr~~l~ 415 (595)
++++.+|+|||++|||++++ +++++++++||+|+.|++ ++++|+|+.+|+++..++. .| .
T Consensus 322 -----~v~k~~leria~~tGa~ivs-----~l~~l~~~~LG~a~~v~~~~ig~d~~~~i~g~~~~~~~TI---~l----r 384 (553)
T 3ko1_A 322 -----RAKKSDLEKLARATGGRVVS-----NIDEISEQDLGYASLIEERKVGEDKMVFVEGAKNPKSISI---LI----R 384 (553)
T ss_dssp -----CCCHHHHHHHHTTTTCCEES-----CGGGCCSSSSEECSEEECCCCSSSCCEEEESCSSSSCEEE---EE----C
T ss_pred -----hhhhhhHHHHHHhhCCeeec-----ccccCChhhcchHHHHHHhhcCcceEEEeccCCCCceEEE---ee----e
Confidence 67899999999999999999 699999999999999985 4899999999988776542 23 3
Q ss_pred hhchHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHcC-ccccchHHHHHHHHHHHHHhhcCCchhHHHHHHHHH
Q 007643 416 NAEQDYEREKLNERIAKLSGGVAVIQLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVK 494 (595)
Q Consensus 416 ~~~~~~~~e~L~ERi~~l~gg~a~i~~~i~Dal~~~k~al~~g-vVpGGGa~e~~ls~~L~~~~~~~~~~~q~~~i~~~a 494 (595)
+++....+| ++|+++|||+++|+++++| +|||||++|++++.+|++++.+.++.+| +++++|+
T Consensus 385 G~te~~l~E---------------~er~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq-~~i~~~a 448 (553)
T 3ko1_A 385 GGLERLVDE---------------TERALRDALGTVADVIKDGRAIAGGGAVEIEIAKKLRKYAPQVGGKEQ-LAVEAYA 448 (553)
T ss_dssp CSSTTHHHH---------------HHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHHHCSHHH-HHHHHHH
T ss_pred ccHHHHHHH---------------HHHHHHHHHHHHHHHhhcCceecCCceeEeHHHHHHHHhccccCChhH-hHHHHHH
Confidence 444433333 2289999999999999999 9999999999999999999877777665 8999999
Q ss_pred HHHhHHHHHHHHhcCCchHHHHHHhhhcC---C-CceeeecCCCccccccccCcccchHHHHHHHHHHHHHHHHHhchhH
Q 007643 495 RALCYPLKLIAKNAGVNGSVVSEKVLSSD---N-HKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDC 570 (595)
Q Consensus 495 ~AL~~ip~~L~~NaG~d~~~vi~kl~~~~---~-~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~ 570 (595)
+||+.||++||+|||+|+.+++.+|++.| + +++|||+.+|++.||++.|||||+.||+++|++|+|+|++|||||+
T Consensus 449 ~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ 528 (553)
T 3ko1_A 449 NALESLVSILIENAGFDPIDLLMKLRSTHENENNKWYGIDLYAGQPVDMWQKGVIEPALVKMNAIKAATEAATLVLRIDD 528 (553)
T ss_dssp HHHHHHHHHHHHHHTSCHHHHHHHHHHTTCSGGGTTEEEETTTTEEEESGGGSCEEETTHHHHHHHHHHHHHHHHHHEEE
T ss_pred HHHHhHHHHHHHhcCCCHHHHHHHHHHHhhCcCCceEeEEeecCCchHHHHhCccchhhhhhhhhhhcchhheEEEehHH
Confidence 99999999999999999999999998754 2 5799999999999999999999999999999999999999999999
Q ss_pred HhhccCCCCCC
Q 007643 571 VVVEIKEPEPA 581 (595)
Q Consensus 571 iI~~~~~~~~~ 581 (595)
+|...|+++|.
T Consensus 529 ii~~~~~~~~~ 539 (553)
T 3ko1_A 529 VVSAGKKSGGE 539 (553)
T ss_dssp ECCC-------
T ss_pred HHHhhhhccCC
Confidence 99998877665
No 8
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=100.00 E-value=5.3e-97 Score=826.30 Aligned_cols=479 Identities=20% Similarity=0.287 Sum_probs=408.4
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhhccCcCCCceeeecCCCCcEEecChHHHhccccccCccchHHHHHHHHHHHh
Q 007643 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (595)
Q Consensus 63 ~k~~~f~~~~~~~~~~~~~v~~la~~v~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~l~l~hP~enigakLl~~~a~~ 142 (595)
..+-.+| .++|..|+.||..|+++|++||||+||||||++++|+|+|||||+||||+|+++||+ |||++++|++
T Consensus 11 ~~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~~~hP~----Akll~e~a~~ 84 (590)
T 3p9d_C 11 SQERTTG--RQAQISNITAAKAVADVIRTCLGPKAMLKMLLDPMGGLVLTNDGHAILREIDVAHPA----AKSMLELSRT 84 (590)
T ss_dssp TCCBCTT--HHHHHTTHHHHHHHHHHSTTTCSSSCCCCEEECTTTCCBCCCCHHHHHHHSCCCCHH----HHTHHHHTTT
T ss_pred CcchhhH--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEECCHHHHHHHhhCCCHH----HHHHHHHHHh
Confidence 3456677 999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred cccccCCCcchHHHHHHHHHHHHHHH-HhcCCChHHHHHHHHHHHHHHHHHHHcccccCCc--h-HHHHHHhhhcC----
Q 007643 143 TNDLAGDGTTTSVVLAQGLIAEGVKV-VAAGANPVLITRGIEKTSKALVSELKQMSKEVED--S-ELADVAAVSAG---- 214 (595)
Q Consensus 143 qd~~~GDGTTt~vvLa~~Ll~~~~~l-i~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~~--~-~L~~va~ts~~---- 214 (595)
||+++||||||+||||++||+++.++ +++|+||+.|++||++|++.++++|++++++++. . .|.++|+||++
T Consensus 85 qd~e~GDGTTtvvVLA~eLL~~a~~l~l~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~e~L~~vA~tslsSK~~ 164 (590)
T 3p9d_C 85 QDEEVGDGTTTVIILAGEILAQCAPYLIEKNIHPVIIIQALKKALTDALEVIKQVSKPVDVENDAAMKKLIQASIGTKYV 164 (590)
T ss_dssp HHHHCSSCHHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHCCTTTTCCTHHHHHHHTTTSTTSTT
T ss_pred hhhhhCCCccchHHHHHHHHhhhHHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHhhccccCCHHHHHHHHHHHHhcccc
Confidence 99999999999999999999999999 9999999999999999999999999999999874 3 89999998864
Q ss_pred --ChhHHHHHHHHHHHhhccCCc------------------EEeeCCCcccceeEEEeeeEEeecccCCccccCcccCcc
Q 007643 215 --NNYEVGNMIAEAMSKVGRKGV------------------VTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAV 274 (595)
Q Consensus 215 --~~~~ls~li~~Av~~v~~~g~------------------I~v~~G~~~~ds~~li~G~~~~~g~~~p~~~~~~~~~~~ 274 (595)
++++|++|+++|+.++++++. |.+.+|++++|+ ++++||+|++++.+| +|++
T Consensus 165 ~~~~~~i~~livdAv~~V~~~~~~~~~~~~~~~vDl~~~I~I~ki~Ggs~~ds-~lv~Gmvfdk~~~~~-------~m~~ 236 (590)
T 3p9d_C 165 IHWSEKMCELALDAVKTVRKDLGQTVEGEPNFEIDIKRYVRVEKIPGGDVLDS-RVLKGVLLNKDVVHP-------KMSR 236 (590)
T ss_dssp GGGHHHHHHHHHHHHTTSTTCC-----------CCCSSSSCEEEESSCCGGGC-BCCSSEEECCCCSCT-------TSCS
T ss_pred cccHHHHHHHHHHHHHHhcccccCccccccccccchhhceEEEEecCCCcccc-eeeeEEEEecccCCC-------CCcc
Confidence 478999999999999987642 233579999999 999999999998775 4888
Q ss_pred cccCeeEEEeccc-------------CCCHHHHHHHH-----------HHHHHcCCCEEEEeccccHHHHHHHHHHhhcc
Q 007643 275 EYENCKLLLVDKK-------------ITNARDLINVL-----------EDAIRGAYPILIIAEDIEQEALATLVVNKLRG 330 (595)
Q Consensus 275 ~~~n~~Ill~d~~-------------i~~~~~i~~~l-----------e~i~~~g~~lvIi~~~i~~~aL~~L~~n~~~g 330 (595)
+++||+|+++|++ |++++++.+++ +++.+.|++|||+.++|+++|+++|..++
T Consensus 237 ~~en~kIll~d~~Le~~K~e~~~~v~Is~~~~l~~il~~E~~~l~~~vekI~~~g~~vII~e~~I~d~Al~~L~k~~--- 313 (590)
T 3p9d_C 237 HIENPRVVLLDCPLEYKKGESQTNIEIEKEEDWNRILQIEEEQVQLMCEQILAVRPTLVITEKGVSDLAQHYLLKGG--- 313 (590)
T ss_dssp CEESCCEECCCCCCSCCCCTTTEECCBCSTTHHHHHHHHHHHHHHHHHHHHHTTCCSEECCSSCCCTHHHHHHHHTT---
T ss_pred eeeeeEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEecCCcCHHHHHHHHhcc---
Confidence 9999999999984 45666665554 68889999999988999999999998873
Q ss_pred cceeEEeeCCCcccchhhhHHHHHHHhCCeEeecCCCccccCCCCCCcee-eeEEE---EecCeEEEEccCCCchh----
Q 007643 331 ALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGN-ASKVV---LTKDTTTIVGDGSTQDA---- 402 (595)
Q Consensus 331 ~~~i~av~~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~-~~~v~---i~~~~~~ii~~~~~~~~---- 402 (595)
|+ .|+++++.+|+|||++|||++++ +++++++++||+ |+.|+ +++++|+|+.+|+++..
T Consensus 314 ---I~-----av~~~~k~~le~ia~~TGa~iis-----~l~~~~~~~LG~~a~~v~~~~ig~d~~~~i~g~~~~~~~~~~ 380 (590)
T 3p9d_C 314 ---CS-----VLRRVKKSDNNRIARVTGATIVN-----RVEDLKESDVGTNCGLFKVEMIGDEYFSFLDNCKEPGSGSGW 380 (590)
T ss_dssp ---CC-----CCCCCCHHHHHHHHHHHTCCCCS-----CSTTCCTTSCBCCCSEEECCEETTEECEEECC----------
T ss_pred ---ce-----eeccCCHHHHHHHHHHhCCceee-----cccCCCHHHhCCcCCEEEEEEEcCcEEEEEeCCCCccccccc
Confidence 34 46689999999999999999998 689999999999 99996 68999999999988777
Q ss_pred ----------------------hhhHHHHHHHHHHhhchHHHHHHHHHHHHHhcCcHHHHH-------------HHHHHH
Q 007643 403 ----------------------VSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQ-------------LRVEDA 447 (595)
Q Consensus 403 ----------------------i~~r~~~lr~~l~~~~~~~~~e~L~ERi~~l~gg~a~i~-------------~~i~Da 447 (595)
++.|+.+||.+++.++++|++ ++++|+||+++|. |+++||
T Consensus 381 ~~~~~~~~~~k~~~~~~~~~~~i~~r~~~i~~~~~~~~~~~~~-----~~~~l~ggv~tI~lrg~te~~l~E~kr~i~DA 455 (590)
T 3p9d_C 381 SHPQFEKGSGKRRWKKNFIAVSAANRFKKISSSGALGSGHHHH-----HHHHGSGKACTIMLRGGSKDILNEIDRNLQDA 455 (590)
T ss_dssp ----------------------------------------------------CCCSCCCEEEECSSTTTHHHHHHHHHHH
T ss_pred cccccccccchhhhhcchhhHHHHHHHHHHHHHHhccCCHHHH-----HHHhhcCCeeEEEEcCCCHHHHHHHHHHHHHH
Confidence 899999999999999999974 4689999987554 999999
Q ss_pred HHHHHHHHHcC-ccccchHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhHHHHHHHHhcCCchHHHHHHhhhc---C
Q 007643 448 LNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSS---D 523 (595)
Q Consensus 448 l~~~k~al~~g-vVpGGGa~e~~ls~~L~~~~~~~~~~~q~~~i~~~a~AL~~ip~~L~~NaG~d~~~vi~kl~~~---~ 523 (595)
|+++|++++++ +|||||++|++++.+|++++++.++.+| +++++|++||+.||++||+|||+|+.+++.+|++. +
T Consensus 456 l~a~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq-~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~ 534 (590)
T 3p9d_C 456 MAVARNVMLSPSLSPGGGATEMAVSVKLAEKAKQLEGIQQ-WPYQAVADAMECIPRTLIQNAGGDPIRLLSQLRAKHAQG 534 (590)
T ss_dssp HHHHHHHHHCCCEECTTTHHHHHHHHHHHHHHHHSCSTTH-HHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHhcCCEEeCccHHHHHHHHHHHHHhhcCChHHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcC
Confidence 99999999995 9999999999999999999887777665 89999999999999999999999999999999874 3
Q ss_pred CCceeeecCCCccccccccCcccchHHHHHHHHHHHHHHHHHhchhHHhhccCC
Q 007643 524 NHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKE 577 (595)
Q Consensus 524 ~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~~ 577 (595)
++++|||+.+|++.||++.|||||+.||+++|++|+|+|++|||||++|...|+
T Consensus 535 ~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id~ii~~~~~ 588 (590)
T 3p9d_C 535 NFTTGIDGDKGKIVDMVSYGIWEPEVIKQQSVKTAIESACLLLRVDDIVSGVRK 588 (590)
T ss_dssp CTTCBCCTTSSSCBCTTTTTCCEEHHHHHHHHHHHHHHHHHTTSEEEEECCCC-
T ss_pred CCCEeEeCCCCeEeehHHcCCeEcHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 578999999999999999999999999999999999999999999999987764
No 9
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=100.00 E-value=8.7e-96 Score=813.91 Aligned_cols=462 Identities=24% Similarity=0.373 Sum_probs=412.9
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhhccCcCCCceeeecCCCCcEEecChHHHhccccccCccchHHHHHHHHHHHh
Q 007643 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (595)
Q Consensus 63 ~k~~~f~~~~~~~~~~~~~v~~la~~v~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~l~l~hP~enigakLl~~~a~~ 142 (595)
+.+..|| +++|..|+.||..|+++|+|||||+||||||++++|+|+|||||+||||+|+++||+ |||++++|++
T Consensus 14 ~~~~~~g--~~a~~~ni~a~~~la~~vkttLGP~G~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~ 87 (545)
T 1a6d_A 14 GTQREQG--KNAQRNNIEAAKAIADAVRTTLGPKGMDKMLVDSIGDIIISNDGATILKEMDVEHPT----AKMIVEVSKA 87 (545)
T ss_dssp ---CEEH--HHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECSSSCEEEECCHHHHHHHSCCCSHH----HHHHHGGGGC
T ss_pred cchhhch--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCcHHHHHHhhhccchH----HHHHHHHHHh
Confidence 3567888 999999999999999999999999999999999999999999999999999999998 9999999999
Q ss_pred cccccCCCcchHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHcccccCC-ch-HHHHHHhhhcC------
Q 007643 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE-DS-ELADVAAVSAG------ 214 (595)
Q Consensus 143 qd~~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~-~~-~L~~va~ts~~------ 214 (595)
||+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|++++++ + +. +|.++|+||++
T Consensus 88 qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~-~~~~~~l~~va~tsl~sKi~~~ 166 (545)
T 1a6d_A 88 QDTAVGDGTTTAVVLSGELLKQAETLLDQGVHPTVISNGYRLAVNEARKIIDEIAEK-STDDATLRKIALTALSGKNTGL 166 (545)
T ss_dssp TTTCSTTHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCEE-CCCHHHHHHHHHHHTTTSSCCS
T ss_pred cCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCC-CCCHHHHHHHHHHHHhcccccc
Confidence 999999999999999999999999999999999999999999999999999999998 6 55 89999998853
Q ss_pred ChhHHHHHHHHHHHhhccC---------CcEEee--CCCcccceeEEEeeeEEeecccCCccccCcccCcccccCeeEEE
Q 007643 215 NNYEVGNMIAEAMSKVGRK---------GVVTLE--EGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLL 283 (595)
Q Consensus 215 ~~~~ls~li~~Av~~v~~~---------g~I~v~--~G~~~~ds~~li~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill 283 (595)
++++|++|+++|+.+++++ +.|+++ +|++++|| ++++||+|+++|.|||| +++++||+|++
T Consensus 167 ~~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~ds-~lv~G~v~dk~~~~~~m-------~~~ien~kIll 238 (545)
T 1a6d_A 167 SNDFLADLVVKAVNAVAEVRDGKTIVDTANIKVDKKNGGSVNDT-QFISGIVIDKEKVHSKM-------PDVVKNAKIAL 238 (545)
T ss_dssp THHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEECCCSCSTTC-EEESEEEESCCCSCTTS-------CSEEEEEEEEE
T ss_pred cHHHHHHHHHHHHHHHhcccCCCcccccceEEEEEecCCCceee-EEEeeEEEeccCCCCCC-------cceecCCEEEE
Confidence 5799999999999999875 267775 99999999 99999999999999985 45789999999
Q ss_pred eccc-------------CCCHHHH-----------HHHHHHHHHcCCCEEEEeccccHHHHHHHHHHhhcccceeEEeeC
Q 007643 284 VDKK-------------ITNARDL-----------INVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKA 339 (595)
Q Consensus 284 ~d~~-------------i~~~~~i-----------~~~le~i~~~g~~lvIi~~~i~~~aL~~L~~n~~~g~~~i~av~~ 339 (595)
+|++ |++++++ .++++++.+.|+||||++++|+++|+++|..| +|+||+
T Consensus 239 ~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~------~I~av~- 311 (545)
T 1a6d_A 239 IDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQKGIDDVAQHYLAKE------GIYAVR- 311 (545)
T ss_dssp ECSCBSCCCCSSCCEEEECSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHH------TCEEEC-
T ss_pred EecCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHC------CeeEec-
Confidence 9998 7777775 78899999999999999999999999999988 467775
Q ss_pred CCcccchhhhHHHHHHHhCCeEeecCCCccccCCCCCCceeeeEEEE---ecCeEEEEccCCCchhhhhHHHHHHHHHHh
Q 007643 340 PGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL---TKDTTTIVGDGSTQDAVSKRVAQIRTLIEN 416 (595)
Q Consensus 340 ~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i---~~~~~~ii~~~~~~~~i~~r~~~lr~~l~~ 416 (595)
++++++|+|||++|||++++ +++++++++||+|+.|++ ++++|+|+.+|++....+. .|| +
T Consensus 312 ----~~~k~~le~ia~~tGa~iis-----~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI---~lr----G 375 (545)
T 1a6d_A 312 ----RVKKSDMEKLAKATGAKIVT-----DLDDLTPSVLGEAETVEERKIGDDRMTFVMGCKNPKAVSI---LIR----G 375 (545)
T ss_dssp ----SCCHHHHHHHHHHHCCCEES-----SGGGCCGGGCEEEEEEEEEEETTEEEEEEEEESCSSCEEE---EEC----C
T ss_pred ----cCCHHHHHHHHHHhCCeeec-----ccccCCHHHCCCceEEEEEEecCceEEEEecCCCCceEEE---EEc----C
Confidence 78899999999999999998 689999999999999985 4799999999877655432 233 3
Q ss_pred hchHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHcC-ccccchHHHHHHHHHHHHHhhcCCchhHHHHHHHHHH
Q 007643 417 AEQDYEREKLNERIAKLSGGVAVIQLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKR 495 (595)
Q Consensus 417 ~~~~~~~e~L~ERi~~l~gg~a~i~~~i~Dal~~~k~al~~g-vVpGGGa~e~~ls~~L~~~~~~~~~~~q~~~i~~~a~ 495 (595)
++....+| ++|+++|||+++|+++++| +|||||++|++++.+|++++++.++.+| +++++|++
T Consensus 376 ~te~~l~E---------------~kr~l~DAl~~~r~a~~~g~iVpGGGa~e~~~~~~L~~~~~~~~g~~q-~~i~~~a~ 439 (545)
T 1a6d_A 376 GTDHVVSE---------------VERALNDAIRVVAITKEDGKFLWGGGAVEAELAMRLAKYANSVGGREQ-LAIEAFAK 439 (545)
T ss_dssp SSSTTHHH---------------HHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHTSCHHHH-HHHHHHHH
T ss_pred CCHHHHHH---------------HHHHHHHHHHHHHHHHhCCCEEeCcCHHHHHHHHHHHHHhhccCccHH-HHHHHHHH
Confidence 34333322 2289999999999999999 9999999999999999999987766654 89999999
Q ss_pred HHhHHHHHHHHhcCCchHHHHHHhhhc---CCCceeeecCCCccccccccCcccchHHHHHHHHHHHHHHHHHhchhHHh
Q 007643 496 ALCYPLKLIAKNAGVNGSVVSEKVLSS---DNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVV 572 (595)
Q Consensus 496 AL~~ip~~L~~NaG~d~~~vi~kl~~~---~~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI 572 (595)
||+.||++||+|||+|+.+++.+|++. ++.++|||+.+|++.||++.|||||+.||+++|++|+|+|++|||||++|
T Consensus 440 ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~id~iI 519 (545)
T 1a6d_A 440 ALEIIPRTLAENAGIDPINTLIKLKADDEKGRISVGVDLDNNGVGDMKAKGVVDPLRVKTHALESAVEVATMILRIDDVI 519 (545)
T ss_dssp HHTHHHHHHHHHHTSCHHHHHHHHHHHHHTTCTTEEEETTTTEEEEHHHHTCEEEHHHHHHHHHHHHHHHHHHHTCCEEC
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcceecccCccccchhcCccccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999864 34689999999999999999999999999999999999999999999999
Q ss_pred hccCCC
Q 007643 573 VEIKEP 578 (595)
Q Consensus 573 ~~~~~~ 578 (595)
...|++
T Consensus 520 ~~~~~~ 525 (545)
T 1a6d_A 520 ASKKST 525 (545)
T ss_dssp ------
T ss_pred hcccCC
Confidence 998766
No 10
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=100.00 E-value=6.2e-96 Score=816.74 Aligned_cols=469 Identities=23% Similarity=0.334 Sum_probs=421.0
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhhccCcCCCceeeecCCCCcEEecChHHHhccccccCccchHHHHHHHHHHHh
Q 007643 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (595)
Q Consensus 63 ~k~~~f~~~~~~~~~~~~~v~~la~~v~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~l~l~hP~enigakLl~~~a~~ 142 (595)
+|+..|| .++|..|+.||..|+++|+|||||+||||||++++|+|+|||||+||||+|+++||+ |||++++|++
T Consensus 16 ~~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~ 89 (559)
T 3p9d_A 16 GGEKISG--DDIRNQNVLATMAVANVVKSSLGPVGLDKMLVDDIGDFTVTNDGATILSLLDVQHPA----GKILVELAQQ 89 (559)
T ss_dssp SCEEEET--HHHHHHHHHHHHHHHHHTTTTSSTTCCEEEECCSSSCCCEECCHHHHHHHHCCCSHH----HHHHHHHHHH
T ss_pred cccccch--HHHHHHHHHHHHHHHHHHHhccCCCCCeeEeEcCCCCEEEECCHHHHHHHhcCCCHH----HHHHHHHHHH
Confidence 7999999 999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred cccccCCCcchHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHc-ccccCCc--h-HHHHHHhhhcCC---
Q 007643 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQ-MSKEVED--S-ELADVAAVSAGN--- 215 (595)
Q Consensus 143 qd~~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~-~s~~v~~--~-~L~~va~ts~~~--- 215 (595)
||+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|++ ++++++. . +|.++|+||+++
T Consensus 90 qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~~~e~L~~vA~tsl~sK~~ 169 (559)
T 3p9d_A 90 QDREIGDGTTSVVIIASELLKRANELVKNKIHPTTIITGFRVALREAIRFINEVLSTSVDTLGKETLINIAKTSMSSKII 169 (559)
T ss_dssp HHHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHTGGGSCC--CTTHHHHHHHTTSSSGG
T ss_pred HHHHcCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHhccCcc
Confidence 99999999999999999999999999999999999999999999999999999 9999874 3 899999999876
Q ss_pred ---hhHHHHHHHHHHHhhcc-----CCc-----EEe--eCCCcccceeEEEeeeEEeecccCCccccCcccCccccc--C
Q 007643 216 ---NYEVGNMIAEAMSKVGR-----KGV-----VTL--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYE--N 278 (595)
Q Consensus 216 ---~~~ls~li~~Av~~v~~-----~g~-----I~v--~~G~~~~ds~~li~G~~~~~g~~~p~~~~~~~~~~~~~~--n 278 (595)
+++|++|+++|+.++++ ++. |++ .+|++++|| ++++||+|+++|.||| |+++++ |
T Consensus 170 ~~~~~~i~~livdAv~~V~~~~~~~~~~i~l~~I~I~k~~Ggs~~ds-~lv~G~v~dk~~~~~~-------m~~~ie~~n 241 (559)
T 3p9d_A 170 GADSDFFSNMVVDALLAVKTQNSKGEIKYPVKAVNVLKAHGKSATES-LLVPGYALNCTVASQA-------MPKRIAGGN 241 (559)
T ss_dssp GTTHHHHHHHHHHHHHHHCCEESSSCEECCTTCCCEEEEESSCSSCC-BCCSEECCCCCCSSTT-------SCSEECSSS
T ss_pred cchhHHHHHHHHHHHHHhcccccCCCCccchhHeEEEEecCCCccce-eEeccEEEeecccCCC-------cceeeccCC
Confidence 79999999999999984 243 333 459999998 9999999999999998 456788 9
Q ss_pred eeEEEecccC-------------CCHHH-----------HHHHHHHHHHcCCCEEEEeccccHHHHHHHHHHhhccccee
Q 007643 279 CKLLLVDKKI-------------TNARD-----------LINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKI 334 (595)
Q Consensus 279 ~~Ill~d~~i-------------~~~~~-----------i~~~le~i~~~g~~lvIi~~~i~~~aL~~L~~n~~~g~~~i 334 (595)
|+|+++|++| +++++ +.++++++.+.|+||||++++|+++|+++|..|+ |
T Consensus 242 ~kIll~~~~Le~~k~e~~~~v~is~~~~l~~i~~~E~~~l~~~le~I~~~g~~lvI~~~~I~~~al~~L~~~~------I 315 (559)
T 3p9d_A 242 VKIACLDLNLQKARMAMGVQINIDDPEQLEQIRKREAGIVLERVKKIIDAGAQVVLTTKGIDDLCLKEFVEAK------I 315 (559)
T ss_dssp BCEEEETTCCSCCCCCTTCCEEECSSSCHHHHHHHHHHHHHHHHHHHHTTCCSEEEESSCCCGGGTHHHHHTT------C
T ss_pred ceEEEEeccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhCCCEEEEcCCCCHHHHHHHHHcC------C
Confidence 9999999985 44443 6788999999999999999999999999999984 5
Q ss_pred EEeeCCCcccchhhhHHHHHHHhCCeEeecCCCccc-cCCCCCCceeeeEEE---EecCeEEEEccCCCchhhhhHHHHH
Q 007643 335 AALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLAL-DKVGKEVLGNASKVV---LTKDTTTIVGDGSTQDAVSKRVAQI 410 (595)
Q Consensus 335 ~av~~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l-~~~~~~~lG~~~~v~---i~~~~~~ii~~~~~~~~i~~r~~~l 410 (595)
+||+ ++++.+|+|||++|||+++++..++.+ +++++++||+|+.|+ +++++|+|+.+|++....+. .|
T Consensus 316 ~av~-----~~~k~~le~ia~~TGa~iis~~~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~tI---~l 387 (559)
T 3p9d_A 316 MGVR-----RCKKEDLRRIARATGATLVSSMSNLEGEETFESSYLGLCDEVVQAKFSDDECILIKGTSKHSSSSI---IL 387 (559)
T ss_dssp EEES-----SCCHHHHHHHHHHSSCCCBCCSCCSTTCCCCCTTTSCCEEEEEEEECSSCEEECEEEESSSCCCCE---EE
T ss_pred ceEc-----cCCHHHHHHHHHHhCCEEEeccccccccccCCHhHCccceEEEEEEEcCceEEEEEcCCCCCEEEE---EE
Confidence 6664 788999999999999999998766665 889999999999998 68999999999877654321 23
Q ss_pred HHHHHhhchHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHcC-ccccchHHHHHHHHHHHHHhhcCCchhHHHH
Q 007643 411 RTLIENAEQDYEREKLNERIAKLSGGVAVIQLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVG 489 (595)
Q Consensus 411 r~~l~~~~~~~~~e~L~ERi~~l~gg~a~i~~~i~Dal~~~k~al~~g-vVpGGGa~e~~ls~~L~~~~~~~~~~~q~~~ 489 (595)
.+++....+| ++|+++|||+++|+++++| +|||||++|++++.+|++++.+.++.+| ++
T Consensus 388 ----rG~te~~l~E---------------~kr~l~DAL~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq-~~ 447 (559)
T 3p9d_A 388 ----RGANDYSLDE---------------MERSLHDSLSVVKRTLESGNVVPGGGCVEAALNIYLDNFATTVGSREQ-LA 447 (559)
T ss_dssp ----EESCHHHHHH---------------HHHHHHHHHHHHHHHHTSSCEECTTTTHHHHHHHHHHHHHTTSCTTHH-HH
T ss_pred ----cCCCHHHHHH---------------HHHHHHHHHHHHHHHhhcCCEEeCccHHHHHHHHHHHHHhcccChHHH-HH
Confidence 3344333222 2289999999999999999 9999999999999999999887777665 89
Q ss_pred HHHHHHHHhHHHHHHHHhcCCchHHHHHHhhhcC---CC------------ceeeecCCCccccccccCcccchHHHHHH
Q 007643 490 ADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSD---NH------------KYGYNAATGNYEDLMAAGIIDPTKVVRCC 554 (595)
Q Consensus 490 i~~~a~AL~~ip~~L~~NaG~d~~~vi~kl~~~~---~~------------~~Gid~~~g~i~d~~~~gI~Dp~~vk~~a 554 (595)
+++|++||+.||++||+|||+|+.+++.+|++.| +. ++|||+.+|++.||++.|||||+.||+++
T Consensus 448 i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~~~~~~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~a 527 (559)
T 3p9d_A 448 IAEFAAALLIIPKTLAVNAAKDSSELVAKLRSYHAASQMAKPEDVKRRSYRNYGLDLIRGKIVDEIHAGVLEPTISKVKS 527 (559)
T ss_dssp HHHHHHHHHHHHHHHHHTSSSCCHHHHHHHHHHHHTTSCCC----CCCCCCCEEECTTSSSEEESTTSSCCEEHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHhccccccccccccccccceeEECCCCcEeehhhccCEecHHHHHHH
Confidence 9999999999999999999999999999998642 33 79999999999999999999999999999
Q ss_pred HHHHHHHHHHHhchhHHhhccCCCC
Q 007643 555 LEHASSVAKTFLMSDCVVVEIKEPE 579 (595)
Q Consensus 555 l~~A~e~a~~iL~iD~iI~~~~~~~ 579 (595)
|++|+|+|++|||||++|...|+++
T Consensus 528 l~~A~e~a~~iL~id~ii~~~~~~~ 552 (559)
T 3p9d_A 528 LKSALEACVAILRIDTMITVDPEPP 552 (559)
T ss_dssp HHHHHHHHHHHHTEEEEEECCCCCC
T ss_pred HHHHHHHHHHHHhHHhhhhcCCccc
Confidence 9999999999999999999887655
No 11
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=100.00 E-value=7.2e-95 Score=806.75 Aligned_cols=466 Identities=23% Similarity=0.381 Sum_probs=411.4
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhhccCcCCCceeeecCCCCcEEecChHHHhccccccCccchHHHHHHHHHHHh
Q 007643 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (595)
Q Consensus 63 ~k~~~f~~~~~~~~~~~~~v~~la~~v~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~l~l~hP~enigakLl~~~a~~ 142 (595)
+.+..|| +++|..|+.||..|+++|+|||||+||||||++++|+|+|||||+||||+|+++||+ |||++++|++
T Consensus 13 ~~~~~~g--~~a~~~ni~a~~~la~~vkttLGP~G~~kml~~~~g~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~ 86 (543)
T 1a6d_B 13 GTKRESG--KDAMKENIEAAIAISNSVRSSLGPRGMDKMLVDSLGDIVITNDGVTILKEMDVEHPA----AKMMVEVSKT 86 (543)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHTTSSTTCCCEEEECTTCCEEEECCHHHHHHHSCCCSHH----HHHHHHHHTC
T ss_pred cchhhhh--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHhhccchH----HHHHHHHHHh
Confidence 4567888 999999999999999999999999999999999999999999999999999999998 9999999999
Q ss_pred cccccCCCcchHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHcccccCCc--h-HHHHHHhhhcC-----
Q 007643 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED--S-ELADVAAVSAG----- 214 (595)
Q Consensus 143 qd~~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~~--~-~L~~va~ts~~----- 214 (595)
||+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|++++++++. . +|.++|+|+++
T Consensus 87 qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~l~~va~tsl~sKi~~ 166 (543)
T 1a6d_B 87 QDSFVGDGTTTAVIIAGGLLQQAQGLINQNVHPTVISEGYRMASEEAKRVIDEISTKIGADEKALLLKMAQTSLNSKSAS 166 (543)
T ss_dssp TTCCCTTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTHHHHHHHHHHHHHTTSGGG
T ss_pred cCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhcccccc
Confidence 999999999999999999999999999999999999999999999999999999999874 4 89999998753
Q ss_pred -ChhHHHHHHHHHHHhhccC--Cc-------EEee--CCCcccceeEEEeeeEEeecccCCccccCcccCcccccCeeEE
Q 007643 215 -NNYEVGNMIAEAMSKVGRK--GV-------VTLE--EGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLL 282 (595)
Q Consensus 215 -~~~~ls~li~~Av~~v~~~--g~-------I~v~--~G~~~~ds~~li~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Il 282 (595)
++++|++|+++|+.+++++ |. |+++ +|++++|| ++++||+|+++|.|||| +++++||+|+
T Consensus 167 ~~~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~ds-~lv~G~v~dk~~~~~~m-------~~~ien~kIl 238 (543)
T 1a6d_B 167 VAKDKLAEISYEAVKSVAELRDGKYYVDFDNIQVVKKQGGAIDDT-QLINGIIVDKEKVHPGM-------PDVVKDAKIA 238 (543)
T ss_dssp GGHHHHHHHHHHHHHHHEEECSSSEEECGGGEEEEEEESSCGGGC-EEESEEEESCCCSSTTS-------CSEEEEEEEE
T ss_pred ccHHHHHHHHHHHHHHhcccccCCcccccceEEEEEecCCCccce-eEEccEEEecCCCCCCC-------cceecCCeEE
Confidence 4689999999999999876 53 6665 99999999 99999999999999985 5678999999
Q ss_pred Eeccc-------------CCCHHHH-----------HHHHHHHHHcCCCEEEEeccccHHHHHHHHHHhhcccceeEEee
Q 007643 283 LVDKK-------------ITNARDL-----------INVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALK 338 (595)
Q Consensus 283 l~d~~-------------i~~~~~i-----------~~~le~i~~~g~~lvIi~~~i~~~aL~~L~~n~~~g~~~i~av~ 338 (595)
++|++ |++++++ .++++++.+.|+||||++++|+++|+++|..| +|+||+
T Consensus 239 l~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~------~I~av~ 312 (543)
T 1a6d_B 239 LLDAPLEIKKPEFDTNLRIEDPSMIQKFLAQEENMLREMVDKIKSVGANVVITQKGIDDMAQHYLSRA------GIYAVR 312 (543)
T ss_dssp EESSCBSCCCCSSEEEECCCSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHT------TCEEEC
T ss_pred EEecccccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEECCCcCHHHHHHHHHC------CeeEec
Confidence 99998 7777775 78899999999999999999999999999987 467775
Q ss_pred CCCcccchhhhHHHHHHHhCCeEeecCCCccccCCCCCCceeeeEEEE---ecCeEEEEccCCCchhhhhHHHHHHHHHH
Q 007643 339 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL---TKDTTTIVGDGSTQDAVSKRVAQIRTLIE 415 (595)
Q Consensus 339 ~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i---~~~~~~ii~~~~~~~~i~~r~~~lr~~l~ 415 (595)
++++++|+|||++|||++++ +++++++++||+|+.|++ ++++|+|+.+|++....+. .| .
T Consensus 313 -----~v~k~~le~ia~~tGa~iis-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI---~l----r 375 (543)
T 1a6d_B 313 -----RVKKSDMDKLAKATGASIVS-----TIDEISSSDLGTAERVEQVKVGEDYMTFVTGCKNPKAVSI---LV----R 375 (543)
T ss_dssp -----SCCHHHHHHHHHHHTCCEES-----CGGGCCGGGCEEEEEEEEEEETTEEEEEEEEESSSSCEEE---EE----E
T ss_pred -----cCCHHHHHHHHHHhCCceec-----ccccCCHHHCCCceEEEEEEecCceEEEEecCCCCceEEE---Ee----c
Confidence 78899999999999999998 689999999999999985 5899999999887655432 23 3
Q ss_pred hhchHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHcC-ccccchHHHHHHHHHHHHHhhcCCchhHHHHHHHHH
Q 007643 416 NAEQDYEREKLNERIAKLSGGVAVIQLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVK 494 (595)
Q Consensus 416 ~~~~~~~~e~L~ERi~~l~gg~a~i~~~i~Dal~~~k~al~~g-vVpGGGa~e~~ls~~L~~~~~~~~~~~q~~~i~~~a 494 (595)
+++ +++.+ | ++|+++|||+++|+++++| +|||||++|++++.+|++++.+.++.+| +++++|+
T Consensus 376 G~t-~~~l~---E-----------~er~l~DAl~~~r~a~~~~~ivpGGGa~e~~~s~~L~~~~~~~~g~~q-~~i~~~a 439 (543)
T 1a6d_B 376 GET-EHVVD---E-----------MERSITDSLHVVASALEDGAYAAGGGATAAEIAFRLRSYAQKIGGRQQ-LAIEKFA 439 (543)
T ss_dssp ESS-HHHHH---H-----------HHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHHTCSSHH-HHHHHHH
T ss_pred CCC-HHHHH---H-----------HHHHHHHHHHHHHHHHHCCCccCCccHHHHHHHHHHHHHhhhcCChHH-HHHHHHH
Confidence 344 33322 2 2289999999999999999 9999999999999999999887777655 8999999
Q ss_pred HHHhHHHHHHHHhcCCchHHHHHHhhhc---CCCceeeecCCCccccccccCcccchHHHHHHHHHHHHHHHHHhchhHH
Q 007643 495 RALCYPLKLIAKNAGVNGSVVSEKVLSS---DNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCV 571 (595)
Q Consensus 495 ~AL~~ip~~L~~NaG~d~~~vi~kl~~~---~~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~i 571 (595)
+||+.||++||+|||+|+.+++.+|++. ++.++|||+.+|++.||++.|||||+.||+++|++|+|+|++|||||++
T Consensus 440 ~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~id~i 519 (543)
T 1a6d_B 440 DAIEEIPRALAENAGLDPIDILLKLRAEHAKGNKTYGINVFTGEIEDMVKNGVIEPIRVGKQAIESATEAAIMILRIDDV 519 (543)
T ss_dssp HHHTHHHHHHHHHHTCCHHHHHHHHHHHHHTTCTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHHEEEE
T ss_pred HHHHHHHHHHHHHcCCChHHHHHHHHHHHhCCCCCeeEeCCCCcccchhhcCceecHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999864 3468999999999999999999999999999999999999999999999
Q ss_pred hhccCCCCCC
Q 007643 572 VVEIKEPEPA 581 (595)
Q Consensus 572 I~~~~~~~~~ 581 (595)
|...|+++|+
T Consensus 520 I~~~~~~~~~ 529 (543)
T 1a6d_B 520 IATKSSSSSS 529 (543)
T ss_dssp EC--------
T ss_pred HhcCccCCCC
Confidence 9998866544
No 12
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=100.00 E-value=4.4e-94 Score=795.49 Aligned_cols=459 Identities=22% Similarity=0.310 Sum_probs=413.6
Q ss_pred cccccCCcHHHHHHHHHHHHHHHHhhhhccCcCCCceeeecCC--CCcEEecChHHHhccccccCccchHHHHHHHHHHH
Q 007643 64 KDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKY--GAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAA 141 (595)
Q Consensus 64 k~~~f~~~~~~~~~~~~~v~~la~~v~stlGP~G~~kmI~~~~--g~~~ITnDG~TIlk~l~l~hP~enigakLl~~~a~ 141 (595)
.+-.|| .++|..|+.||..|+++|++||||+||||||++++ |+|+|||||+||||+|+++||. |||++++|+
T Consensus 3 ~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~~~G~~~iTnDG~tIlk~i~v~hp~----Akll~e~a~ 76 (513)
T 3iyg_B 3 ADEERA--ETARLSSFIGAIAIGDLVKSTLGPKGMDKILLSSGRDASLMVTNDGATILKNIGVDNPA----AKVLVDMSR 76 (513)
T ss_pred cchhhh--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEeecCCCCCCeEEECCHHHHHHHccccCHH----HHHHHHHHH
Confidence 345678 99999999999999999999999999999999999 9999999999999999999997 999999999
Q ss_pred hcccccCCCcchHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHcccccCC-----ch-HHHHHHhhhcC-
Q 007643 142 KTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE-----DS-ELADVAAVSAG- 214 (595)
Q Consensus 142 ~qd~~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~-----~~-~L~~va~ts~~- 214 (595)
+||+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|++++++++ +. +|.++|+||++
T Consensus 77 ~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~l~~va~tslss 156 (513)
T 3iyg_B 77 VQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAARQALLNSAVDHGSDEVKFRQDLMNIAGTTLSS 156 (513)
T ss_pred HhhhhhCCChhhhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCcccccccCHHHHHHHHHhhhcc
Confidence 999999999999999999999999999999999999999999999999999999999986 34 89999998874
Q ss_pred -----ChhHHHHHHHHHHHhhccC---CcEEee--CCCcccceeEEEeeeEEeecccCCccccCcccCcccccCeeEEEe
Q 007643 215 -----NNYEVGNMIAEAMSKVGRK---GVVTLE--EGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLV 284 (595)
Q Consensus 215 -----~~~~ls~li~~Av~~v~~~---g~I~v~--~G~~~~ds~~li~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~ 284 (595)
++++|++|+++|+.+++++ +.|+++ .|++++|| ++++||+|+++|.+| |+++++||+|+++
T Consensus 157 K~~~~~~~~i~~livdAv~~V~~~~d~~~I~V~ki~gg~~~ds-~lv~G~v~dk~~~~~--------m~~~~en~kIll~ 227 (513)
T 3iyg_B 157 KLLTHHKDHFTKLAVEAVLRLKGSGNLEAIHVIKKLGGSLADS-YLDEGFLLDKKIGVN--------QPKRIENAKILIA 227 (513)
T ss_pred cccccchHHHHHHHHHHHHHhcccCCcCeEEEEEeCCCCccce-eEEeeEEEeccccCC--------CceeecCceEEEE
Confidence 4689999999999999987 777663 79999999 999999999999876 6778999999999
Q ss_pred cc--------------cCCCHHHHHH-----------HHHHHHHcCCCEEEEeccccHHHHHHHHHHhhcccceeEEeeC
Q 007643 285 DK--------------KITNARDLIN-----------VLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKA 339 (595)
Q Consensus 285 d~--------------~i~~~~~i~~-----------~le~i~~~g~~lvIi~~~i~~~aL~~L~~n~~~g~~~i~av~~ 339 (595)
|+ +|++++++.+ +++++.+.|+||||++++|+++++++|..+ +|+||++
T Consensus 228 ~~~Le~~k~e~~~~~v~iss~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~al~~L~~~------~I~av~~ 301 (513)
T 3iyg_B 228 NTGMDTDKIKIFGSRVRVDSTAKVAEIEHAEKEKMKEKVERILKHGINCFINRQLIYNYPEQLFGAA------GVMAIEH 301 (513)
T ss_pred cCCcccccccccCCceEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCCccHHHHHHHHHc------CceEEec
Confidence 98 4677777754 688999999999999999999999999865 6899997
Q ss_pred CCcccchhhhHHHHHHHhCCeEeecCCCccccCCCCCCceeeeEEE---EecCeEEEEccCCCchhhhhHHHHHHHHHHh
Q 007643 340 PGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVV---LTKDTTTIVGDGSTQDAVSKRVAQIRTLIEN 416 (595)
Q Consensus 340 ~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~---i~~~~~~ii~~~~~~~~i~~r~~~lr~~l~~ 416 (595)
|+ +.+|+|||++|||++++ +++++++++||+|+.|+ +++++++++.+|++....+. .|| +
T Consensus 302 ~~-----~~~le~ia~~tGa~ii~-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~tI---~lr----G 364 (513)
T 3iyg_B 302 AD-----FVGVERLALVTGGEIAS-----TFDHPELVKLGSCKLIEEVMIGEDKLIHFSGVALGEACTI---VLR----G 364 (513)
T ss_pred CC-----HHHHHHHHHHhCCEEec-----ccccCCHhHCCcccEEEEEEECCeEEEEEecCCCCceEEE---Eec----C
Confidence 77 46799999999999999 68999999999999997 78999999999876544321 343 3
Q ss_pred hchHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHcC-ccccchHHHHHHHHHHHHHhhcCCchhHHHHHHHHHH
Q 007643 417 AEQDYEREKLNERIAKLSGGVAVIQLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKR 495 (595)
Q Consensus 417 ~~~~~~~e~L~ERi~~l~gg~a~i~~~i~Dal~~~k~al~~g-vVpGGGa~e~~ls~~L~~~~~~~~~~~q~~~i~~~a~ 495 (595)
++....+| ++|+++|||+++|++++++ +|||||++|++++.+|++++.+.++.+| +++++|++
T Consensus 365 ~t~~~l~E---------------~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q-~~i~~~a~ 428 (513)
T 3iyg_B 365 ATQQILDE---------------AERSLHDALCVLAQTVKDSRTVYGGGCSEMLMAHAVTQLASRTPGKEA-VAMESYAK 428 (513)
T ss_pred CCHHHHHH---------------HHHHHHHHHHHHHHHHhCCcEEeCCcHHHHHHHHHHHHHhhccCcHHH-HHHHHHHH
Confidence 33333222 2289999999999999995 9999999999999999999887777655 89999999
Q ss_pred HHhHHHHHHHHhcCCchHHHHHHhhhcC---CCceeeecCCCccccccccCcccchHHHHHHHHHHHHHHHHHhchhHHh
Q 007643 496 ALCYPLKLIAKNAGVNGSVVSEKVLSSD---NHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVV 572 (595)
Q Consensus 496 AL~~ip~~L~~NaG~d~~~vi~kl~~~~---~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI 572 (595)
||+.||++||+|||+|+.+++.+|++.| ++++|||+.+|++.||++.|||||+.||+++|++|+|+|++|||||++|
T Consensus 429 ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~id~ii 508 (513)
T 3iyg_B 429 ALRMLPTIIADNAGYDSADLVAQLRAAHSEGKTTAGLDMKEGTIGDMSVLGITESFQVKRQVLLSAAEAAEVILRVDNII 508 (513)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeecCCCCCccchHhccCEecHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999998753 5689999999999999999999999999999999999999999999999
Q ss_pred hccC
Q 007643 573 VEIK 576 (595)
Q Consensus 573 ~~~~ 576 (595)
...|
T Consensus 509 ~~~~ 512 (513)
T 3iyg_B 509 KAAP 512 (513)
T ss_pred hcCC
Confidence 8865
No 13
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1e-93 Score=792.34 Aligned_cols=456 Identities=20% Similarity=0.297 Sum_probs=407.6
Q ss_pred HHHHHHHHHHHHHHHHhhhhccCcCCCceeeecCCCCcEEecChHHHhccccccCccchHHHHHHHHHHHhcccccCCCc
Q 007643 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (595)
Q Consensus 72 ~~~~~~~~~~v~~la~~v~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~l~l~hP~enigakLl~~~a~~qd~~~GDGT 151 (595)
.+++..|+.||..|+++|+|||||+||||||++++|+|+|||||+||||+|+++||+ |||++++|++||+++||||
T Consensus 10 ~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~qd~~~GDGT 85 (515)
T 3iyg_H 10 IPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVHPA----AKTLVDIAKSQDAEVGDGT 85 (515)
T ss_pred HHHHHHHHHHHHHHHHHHhhCcCCCCCeEEEECCCCCeEEECCHHHHHHHccCCCHH----HHHHHHHHHHhhceeCcch
Confidence 789999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHcccccCC--c----h-HHHHHHhhhcC------ChhH
Q 007643 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE--D----S-ELADVAAVSAG------NNYE 218 (595)
Q Consensus 152 Tt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~--~----~-~L~~va~ts~~------~~~~ 218 (595)
||+||||++||+++.+++++|+||+.|++||++|++.++++|++++++++ + . .|.++|+||++ ++++
T Consensus 86 TtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~~~~~L~~va~tsl~sK~~s~~~~~ 165 (515)
T 3iyg_H 86 TSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEIAVTVKKEDKVEQRKLLEKCAMTALSSKLISQQKAF 165 (515)
T ss_pred hhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCChHHHHHHHHHHHHHHhcCCcccccHHH
Confidence 99999999999999999999999999999999999999999999999984 4 3 67999999874 5789
Q ss_pred HHHHHHHHHHhhccC---CcEEe--eCCCcccceeEEEeeeEEeecccCCccccCcccCcccccCeeEEEeccc------
Q 007643 219 VGNMIAEAMSKVGRK---GVVTL--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKK------ 287 (595)
Q Consensus 219 ls~li~~Av~~v~~~---g~I~v--~~G~~~~ds~~li~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~------ 287 (595)
|++|+++|+.+++.+ +.|++ .+|+++.|+ ++++||+|+++|.||||.+. |.+++||+|+++|++
T Consensus 166 i~~livdAv~~V~~~~d~~~I~V~k~~Gg~~~ds-~lv~G~~~dk~~~~p~~~~~----p~~~en~kIll~~~~Le~~k~ 240 (515)
T 3iyg_H 166 FAKMVVDAVMMLDDLLQLKMIGIKKVQGGALEES-QLVAGVAFKKTFSYAGFEMQ----PKKYHNPMIALLNVELELKAE 240 (515)
T ss_pred HHHHHHHHHHHhcccCCcceEEEEecCCCCccce-EEEeeeEEecCccCcccccC----CccccccEEEEEccccccccc
Confidence 999999999999866 66665 478899998 99999999999999998754 458999999999984
Q ss_pred -------CCCHHHH-----------HHHHHHHHHcCCCEEEEeccccHHHHHHHHHHhhcccceeEEeeCCCcccchhhh
Q 007643 288 -------ITNARDL-----------INVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQY 349 (595)
Q Consensus 288 -------i~~~~~i-----------~~~le~i~~~g~~lvIi~~~i~~~aL~~L~~n~~~g~~~i~av~~~~~~~~~~~~ 349 (595)
|++++++ .++++++.+.|+||||++++|++.++++|..+ +|+++ +++++.+
T Consensus 241 e~~~~v~is~~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~dla~~~l~~~------gI~~v-----~~~~k~~ 309 (515)
T 3iyg_H 241 KDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFADR------DMFCA-----GRVPEED 309 (515)
T ss_pred ccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEECCcccHHHHHHHHHc------CCccc-----ccccHHH
Confidence 7788776 56689999999999999999999888877533 34444 5888999
Q ss_pred HHHHHHHhCCeEeecCCCccccCCCCCCceeeeEEEE---ecCeEEEEccCCCchhhhhHHHHHHHHHHhhchHHHHHHH
Q 007643 350 LDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL---TKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKL 426 (595)
Q Consensus 350 L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i---~~~~~~ii~~~~~~~~i~~r~~~lr~~l~~~~~~~~~e~L 426 (595)
|+|||++|||++++ +++++++++||+|+.|++ ++++|+++.+|+++...+. .|| +++....+|
T Consensus 310 leria~~tGa~ii~-----~l~~~~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~~~tI---~lr----G~t~~~l~E-- 375 (515)
T 3iyg_H 310 LKRTMMACGGSIQT-----SVNALSSDVLGRCQVFEETQIGGERYNFFTGCPKAKTCTI---ILR----GGAEQFMEE-- 375 (515)
T ss_pred HHHHHHHhCCEEee-----ccccCCHHHCCcccEEEEEEEcCeEEEEEecCCCCceEEE---EEe----CCcHHHHHH--
Confidence 99999999999999 689999999999999985 4799999999987655321 243 333333222
Q ss_pred HHHHHHhcCcHHHHHHHHHHHHHHHHHHHHcC-ccccchHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhHHHHHHH
Q 007643 427 NERIAKLSGGVAVIQLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIA 505 (595)
Q Consensus 427 ~ERi~~l~gg~a~i~~~i~Dal~~~k~al~~g-vVpGGGa~e~~ls~~L~~~~~~~~~~~q~~~i~~~a~AL~~ip~~L~ 505 (595)
++|+++|||+++|++++++ +|||||++|++++.+|++++++.++.+| +++++|++||+.||++||
T Consensus 376 -------------~kr~i~DAl~~~r~~v~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq-~~i~~~a~ALe~ip~~La 441 (515)
T 3iyg_H 376 -------------TERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQ-LLIGAYAKALEIIPRQLC 441 (515)
T ss_pred -------------HHHHHHHHHHHHHHHhhCCCeecCCcHHHHHHHHHHHHHHhcCChHHH-HHHHHHHHHHHHHHHHHH
Confidence 2289999999999999985 9999999999999999999888777665 899999999999999999
Q ss_pred HhcCCchHHHHHHhhhcC---CCceeeecCCCccccccccCcccchHHHHHHHHHHHHHHHHHhchhHHhhcc
Q 007643 506 KNAGVNGSVVSEKVLSSD---NHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEI 575 (595)
Q Consensus 506 ~NaG~d~~~vi~kl~~~~---~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~~~ 575 (595)
+|||+|+.+++.+|++.| +.++|||+.+|++.||++.|||||+.||+++|++|+|+|++|||||++|..+
T Consensus 442 ~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~a~~iL~iD~ii~~~ 514 (515)
T 3iyg_H 442 DNAGFDATNILNKLRARHAQGGMWYGVDINTEDIADNFEAFVWEPAMVRINALTAASEAACLIVSVDETIKNP 514 (515)
T ss_pred HhcCCCHHHHHHHHHHHhhccCCCeeEeCCCCcccccHhccCEECHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 999999999999998753 4579999999999999999999999999999999999999999999999754
No 14
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=100.00 E-value=3.9e-95 Score=808.87 Aligned_cols=467 Identities=19% Similarity=0.277 Sum_probs=413.1
Q ss_pred cccccCCcHHHHHHHHHHHHHHHHhhhhccCcCCCceeeecCCCCcEEecChHHHhccccccCccchHHHHHHHHHHHhc
Q 007643 64 KDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKT 143 (595)
Q Consensus 64 k~~~f~~~~~~~~~~~~~v~~la~~v~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~l~l~hP~enigakLl~~~a~~q 143 (595)
.+-.+| .++|..|+.||..|+++|++||||+||||||++++|+|+|||||+||||+|+++||+ |||++++|++|
T Consensus 17 ~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hP~----Akll~e~a~~q 90 (550)
T 3p9d_G 17 TDASQG--KGQIISNINACVAVQEALKPTLGPLGSDILIVTSNQKTTISNDGATILKLLDVVHPA----AKTLVDISRAQ 90 (550)
T ss_dssp CCEEES--HHHHHHHHHHHHHHHTTTGGGSTTTCCCEEEECSSSCEEEECCHHHHTTTSCCCSHH----HHHHHHHHHHH
T ss_pred cchhhh--HHHHHHHHHHHHHHHHHHHhccCCCCCcEEEECCCCCeEEECCHHHHHHHccCCCHH----HHHHHHHHHHh
Confidence 445577 899999999999999999999999999999999999999999999999999999998 99999999999
Q ss_pred ccccCCCcchHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHcccccCCc-----h-HHHHHHhhhcC---
Q 007643 144 NDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED-----S-ELADVAAVSAG--- 214 (595)
Q Consensus 144 d~~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~~-----~-~L~~va~ts~~--- 214 (595)
|+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|++++++++. . +|.++|+||++
T Consensus 91 d~e~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~L~~vA~tsl~sK~ 170 (550)
T 3p9d_G 91 DAEVGDGTTSVTILAGELMKEAKPFLEEGISSHLIMKGYRKAVSLAVEKINELAVDITSEKSSGRELLERCARTAMSSKL 170 (550)
T ss_dssp HTTTSSCHHHHHHHHHHHHHTTSHHHHSSSCTTHHHHHHHHHHHHHHHHHHHSEECCCCC------CHHHHHHHHHHHTT
T ss_pred hhhhCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCcchhHHHHHHHHHHhccCcc
Confidence 99999999999999999999999999999999999999999999999999999998752 4 79999999864
Q ss_pred ---ChhHHHHHHHHHHHhhcc-C------CcEEeeCCCcccceeEEEeeeEEeecccCCccccCcccCcccccCeeEEEe
Q 007643 215 ---NNYEVGNMIAEAMSKVGR-K------GVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLV 284 (595)
Q Consensus 215 ---~~~~ls~li~~Av~~v~~-~------g~I~v~~G~~~~ds~~li~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~ 284 (595)
++++|++|+++|+.++++ + +++++ +|++++|| ++++||+|+++|.||||.+ |+..++||+|+++
T Consensus 171 ~~~~~~~i~~livdAv~~V~~~~~dl~~I~Vikv-~Gg~~~ds-~lv~G~~~dk~~~s~yf~~----~~~~~en~kIll~ 244 (550)
T 3p9d_G 171 IHNNADFFVKMCVDAVLSLDRNDLDDKLIGIKKI-PGGAMEES-LFINGVAFKKTFSYAGFEQ----QPKKFNNPKILSL 244 (550)
T ss_dssp TGGGHHHHHHHHHHHHHHCCSSSCCGGGCCCCBC-CSSCGGGC-CCCSSEEECCCSSCTTCSC----SCSCCSSCCEEEE
T ss_pred ccccHhHHHHHHHHHHHHhCccccCchheeEEEe-cCCCccce-eEEeeEEEecccccccccc----CcccccCceEEEe
Confidence 478999999999999984 3 45554 69999999 9999999999999999975 5557999999999
Q ss_pred ccc-------------CCCHHHHHH-----------HHHHHHHcCCCEEEEeccccHHHHHHHHHHhhcccceeEEeeCC
Q 007643 285 DKK-------------ITNARDLIN-----------VLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAP 340 (595)
Q Consensus 285 d~~-------------i~~~~~i~~-----------~le~i~~~g~~lvIi~~~i~~~aL~~L~~n~~~g~~~i~av~~~ 340 (595)
|++ |++++++.+ +++++.+.|++|||++++|++.++++|..+ +|+++
T Consensus 245 ~~~Le~~k~e~~~~v~is~~~~l~~il~~E~~~l~~~v~~I~~~g~~vVi~~~~I~dla~~~L~~~------gI~~v--- 315 (550)
T 3p9d_G 245 NVELELKAEKDNAEVRVEHVEDYQAIVDAEWQLIFEKLRQVEETGANIVLSKLPIGDLATQFFADR------NIFCA--- 315 (550)
T ss_dssp CSCCSCCCCSSCEEEEECSSSHHHHHHHHHHHHHHHHHHHHHTTTCSEEEESSCCCHHHHHTTGGG------TCEEE---
T ss_pred ccccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccHHHHHHHHHc------CCccc---
Confidence 997 566666544 678899999999999999999888877643 45555
Q ss_pred CcccchhhhHHHHHHHhCCeEeecCCCccccCCCCCCceeeeEEEE---ecCeEEEEccCCCchhhhhHHHHHHHHHHhh
Q 007643 341 GFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL---TKDTTTIVGDGSTQDAVSKRVAQIRTLIENA 417 (595)
Q Consensus 341 ~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i---~~~~~~ii~~~~~~~~i~~r~~~lr~~l~~~ 417 (595)
+++++.+|+|||++|||++++ +++++++++||+|+.|++ ++++++++.+|+++...+. .|| ++
T Consensus 316 --~~v~k~~lerIa~~tGa~iis-----~l~~l~~~~LG~a~~v~~~~ig~e~~~~~~g~~~~~~~tI---~lr----G~ 381 (550)
T 3p9d_G 316 --GRVSADDMNRVIQAVGGSIQS-----TTSDIKPEHLGTCALFEEMQIGSERYNLFQGCPQAKTCTL---LLR----GG 381 (550)
T ss_dssp --ECCCTTHHHHHHHHTCCCCBS-----SGGGCCGGGCCCCSBCCCCCCSSSCCEEEBCCTTCCCCCC---CBC----SS
T ss_pred --cCcCHHHHHHHHHHhCCceec-----chhhCCHHHcCCceEEEEEEeCCeEEEEEecCCCCceeEE---EEe----CC
Confidence 478899999999999999998 699999999999999975 7899999999976654321 233 34
Q ss_pred chHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHcC-ccccchHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHH
Q 007643 418 EQDYEREKLNERIAKLSGGVAVIQLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRA 496 (595)
Q Consensus 418 ~~~~~~e~L~ERi~~l~gg~a~i~~~i~Dal~~~k~al~~g-vVpGGGa~e~~ls~~L~~~~~~~~~~~q~~~i~~~a~A 496 (595)
+ +.+.+ | ++|+++||||++|+++++| +|||||++|++++.+|++++++.++.+| +++++|++|
T Consensus 382 t-e~~l~---E-----------~kr~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq-~~i~~~a~A 445 (550)
T 3p9d_G 382 A-EQVIA---E-----------VERSLHDAIMIVKRALQNKLIVAGGGATEMEVSKCLRDYSKTIAGKQQ-MIINAFAKA 445 (550)
T ss_dssp S-HHHHH---H-----------HHHHHHHHHHHHHHHHHSCCEEETTTHHHHHHHHHHHHHHHTCCSTTH-HHHHHHHHH
T ss_pred c-HHHHH---H-----------HHHHHHhHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhhcCChHHH-HHHHHHHHH
Confidence 3 33322 2 2289999999999999999 9999999999999999999887777665 899999999
Q ss_pred HhHHHHHHHHhcCCchHHHHHHhhhc---CCCceeeecCCCccccccccCcccchHHHHHHHHHHHHHHHHHhchhHHhh
Q 007643 497 LCYPLKLIAKNAGVNGSVVSEKVLSS---DNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVV 573 (595)
Q Consensus 497 L~~ip~~L~~NaG~d~~~vi~kl~~~---~~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~ 573 (595)
|+.||++||+|||+|+.+++.+|++. +++++|||+.+|++.||++.|||||+.||+++|++|+|+|++|||||++|.
T Consensus 446 Le~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~a~~iL~id~ii~ 525 (550)
T 3p9d_G 446 LEVIPRQLCENAGFDAIEILNKLRLAHSKGEKWYGVVFETENIGDNFAKFVWEPALVKINALNSATEATNLILSVDETIT 525 (550)
T ss_dssp HTHHHHHHHHTSCSCHHHHHHHHHHHHHHSCSCCCBCSSSSSBCCHHHHTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEC
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeeeCCCCcccchHhccCEecHHHHHHHHHHHHHHHHHHHhHHHHhh
Confidence 99999999999999999999999874 356899999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCC
Q 007643 574 EIKEPEPA 581 (595)
Q Consensus 574 ~~~~~~~~ 581 (595)
..|+++++
T Consensus 526 ~~~~~~~~ 533 (550)
T 3p9d_G 526 NKGSESAN 533 (550)
T ss_dssp CCCCC---
T ss_pred CCCccccc
Confidence 98776544
No 15
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=100.00 E-value=1e-94 Score=802.54 Aligned_cols=460 Identities=22% Similarity=0.298 Sum_probs=413.3
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhhccCcCCCceeeecCCCCcEEecChHHHhccccccCccchHHHHHHHHHHHh
Q 007643 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (595)
Q Consensus 63 ~k~~~f~~~~~~~~~~~~~v~~la~~v~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~l~l~hP~enigakLl~~~a~~ 142 (595)
.|+..|| .++|..|+.||..|+++|++||||+||||||++++|+|+|||||+||||+|+++||+ |+|++++|++
T Consensus 11 ~~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----akll~e~a~~ 84 (528)
T 3p9d_D 11 FKNKEKP--QEVRKANIIAARSVADAIRTSLGPKGMDKMIKTSRGEIIISNDGHTILKQMAILHPV----ARMLVEVSAA 84 (528)
T ss_dssp SCBCCCH--HHHHHHHHHHHHHHHHHHTTTSSTTCCCEEEECSSCCEEEECCHHHHHHHSCCCCTT----HHHHHHHHHH
T ss_pred cchhcch--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEECCHHHHHHHcccCCHH----HHHHHHHHHH
Confidence 6888999 999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred cccccCCCcchHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHcccccCC--ch-HHHHHHhhhcCC----
Q 007643 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE--DS-ELADVAAVSAGN---- 215 (595)
Q Consensus 143 qd~~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~--~~-~L~~va~ts~~~---- 215 (595)
||+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++ +. +|.++|+||+++
T Consensus 85 qd~e~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~e~l~~va~tsl~sK~~~ 164 (528)
T 3p9d_D 85 QDSEAGDGTTSVVILTGALLGAAERLLNKGIHPTIIADSFQSAAKRSVDILLEMCHKVSLSDREQLVRAASTSLSSKIVS 164 (528)
T ss_dssp HHHHTCSCSHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCHHHHHHHHHHHSCSSSCS
T ss_pred hhhhhCCChhhHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHhcCCccc
Confidence 99999999999999999999999999999999999999999999999999999999987 55 899999999875
Q ss_pred --hhHHHHHHHHHHHhhcc--CCcEEe-------eCCCcccceeEEEeeeEEeecccCCccccCcccCcccccCeeEEEe
Q 007643 216 --NYEVGNMIAEAMSKVGR--KGVVTL-------EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLV 284 (595)
Q Consensus 216 --~~~ls~li~~Av~~v~~--~g~I~v-------~~G~~~~ds~~li~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~ 284 (595)
+++|++|+++|+.++++ ++.|.+ .+|++++|| ++++||+|+++|.|||| |+++++||+|+++
T Consensus 165 ~~~~~i~~livdAv~~V~~~~~~~i~v~~I~I~k~~Gg~~~ds-~lv~G~v~dk~~~~~~~------m~~~ien~kIll~ 237 (528)
T 3p9d_D 165 QYSSFLAPLAVDSVLKISDENSKNVDLNDIRLVKKVGGTIDDT-EMIDGVVLTQTAIKSAG------GPTRKEKAKIGLI 237 (528)
T ss_dssp TTHHHHHHHHHHHHHTTCCTTTTCCCGGGSBCCCCCSSCSCCC-EEESSCBCCCCCCCSSS------CCSEESSEEEEEE
T ss_pred hhHHHHHHHHHHHHHHhccccCCccceEEEEEEEecCCCccce-EEEeeeEEeecccCccc------CcccccCceEEEE
Confidence 68999999999999987 454332 359999998 99999999999999986 7889999999999
Q ss_pred cccCC-------------CHHH-----------HHHHHHHHHHcCCCEEEEeccc-----cHHHHHHHHHHhhcccceeE
Q 007643 285 DKKIT-------------NARD-----------LINVLEDAIRGAYPILIIAEDI-----EQEALATLVVNKLRGALKIA 335 (595)
Q Consensus 285 d~~i~-------------~~~~-----------i~~~le~i~~~g~~lvIi~~~i-----~~~aL~~L~~n~~~g~~~i~ 335 (595)
|++|+ ++++ +.++++++.+.|+||||++++| +++++++|..| +|+
T Consensus 238 ~~~le~~k~~~~~~i~i~~~~~~~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~a~~~~al~~L~~~------~I~ 311 (528)
T 3p9d_D 238 QFQISPPKPDTENNIIVNDYRQMDKILKEERAYLLNICKKIKKAKCNVLLIQKSILRDAVNDLALHFLSKL------NIM 311 (528)
T ss_dssp CCCSSCCCCSSEEEEEESSSSHHHHHTHHHHHHHHHHHHHHHHTTCCEEEESSCSCTTSCSCHHHHHHTTT------SCC
T ss_pred eccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCcccccCCHHHHHHHHHc------CcE
Confidence 99764 4443 6788999999999999999999 99999999876 468
Q ss_pred EeeCCCcccchhhhHHHHHHHhCCeEeecCCCccccCCCCCCceeeeEEE---EecCeEEEEccCC--C-chhhhhHHHH
Q 007643 336 ALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVV---LTKDTTTIVGDGS--T-QDAVSKRVAQ 409 (595)
Q Consensus 336 av~~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~---i~~~~~~ii~~~~--~-~~~i~~r~~~ 409 (595)
||+ ++++.+|+|||++|||++++ +++++++++||+|+.|+ +++++++++.+|. + ....+. .
T Consensus 312 av~-----~~~k~~le~ia~~tGa~ii~-----~~~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~~~~~~tI---~ 378 (528)
T 3p9d_D 312 VVK-----DIEREEIEFLSKGLGCKPIA-----DIELFTEDRLDSADLVEEIDSDGSKIVRVTGIRNNNARPTVSV---V 378 (528)
T ss_dssp EEE-----CCCTHHHHHHHHHHTCCCCS-----CSTTCCSSSEEEESCEECCEETTEECCBCTTBCCGGGCCCCEE---E
T ss_pred EEE-----eCCHHHHHHHHHHHCCEEec-----ccccCCHHHCCcccEEEEEEECCEEEEEEEcccccCCCceEEE---E
Confidence 887 66789999999999999999 57899999999999997 4578889998876 3 333221 2
Q ss_pred HHHHHHhhchHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHcC-ccccchHHHHHHHHHHHHHhhcCCchhHHH
Q 007643 410 IRTLIENAEQDYEREKLNERIAKLSGGVAVIQLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKV 488 (595)
Q Consensus 410 lr~~l~~~~~~~~~e~L~ERi~~l~gg~a~i~~~i~Dal~~~k~al~~g-vVpGGGa~e~~ls~~L~~~~~~~~~~~q~~ 488 (595)
|| +++....+| ++|+++|||+++|+++++| +|||||++|++++.+|++++.+.++.+| +
T Consensus 379 lr----G~te~~l~E---------------~kr~i~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq-~ 438 (528)
T 3p9d_D 379 IR----GANNMIIDE---------------TERSLHDALCVIRCLVKERGLIAGGGAPEIEISRRLSKEARSMEGVQA-F 438 (528)
T ss_dssp CC----CSSTTHHHH---------------HHHHHTTTHHHHHHHHHSSCEEETTTHHHHHHHHHHHHCCTTSCHHHH-T
T ss_pred Ec----CCCHHHHHH---------------HHHHHHHHHHHHHHHHhcCCccCCCCHHHHHHHHHHHHHhhccChHHH-H
Confidence 33 344333333 2289999999999999999 9999999999999999999877766655 8
Q ss_pred HHHHHHHHHhHHHHHHHHhcCCchHHHHHHhhhcC---CCceeeecCCCccccccccCcccchHHHHHHHHHHHHHHHHH
Q 007643 489 GADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSD---NHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTF 565 (595)
Q Consensus 489 ~i~~~a~AL~~ip~~L~~NaG~d~~~vi~kl~~~~---~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~i 565 (595)
++++|++||+.||++||+|||+|+.+++.+|++.| ++++|||+.+|++.||++.|||||+.||+++|++|+|+|++|
T Consensus 439 ~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~i 518 (528)
T 3p9d_D 439 IWQEFASALEVIPTTLAENAGLNSIKVVTELRSKHENGELNDGISVRRSGTTNTYEEHILQPVLVSTSAITLASECVKSI 518 (528)
T ss_dssp THHHHHHHHTHHHHHHHHTTSSCHHHHHHHHTTCCCSSSCCCCCCSSSSSCCCHHHHCCEEEHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhccCCccceecCCCCccchHhccCeecHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998754 468999999999999999999999999999999999999999
Q ss_pred hchhHHhhc
Q 007643 566 LMSDCVVVE 574 (595)
Q Consensus 566 L~iD~iI~~ 574 (595)
||||+||+.
T Consensus 519 L~iD~ii~~ 527 (528)
T 3p9d_D 519 LRIDDIAFS 527 (528)
T ss_dssp HHCSCCCBC
T ss_pred HhhhHheec
Confidence 999999875
No 16
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=2.8e-93 Score=791.66 Aligned_cols=463 Identities=22% Similarity=0.302 Sum_probs=412.2
Q ss_pred ccccCCcHHHHHHHHHHHHHHHHhhhhccCcCCCceeeecCCCCcEEecChHHHhccccccCccchHHHHHHHHHHHhcc
Q 007643 65 DLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTN 144 (595)
Q Consensus 65 ~~~f~~~~~~~~~~~~~v~~la~~v~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~l~l~hP~enigakLl~~~a~~qd 144 (595)
+-.|| .++|..|+.||..|+++|+|||||+||||||+++.|+|+|||||+||||+|+++||+ |||++++|++||
T Consensus 4 ~~~~g--~~a~~~ni~a~~~la~~v~ttlGP~G~~kml~~~~g~~~iTnDG~tIlk~i~v~hP~----akll~~~a~~qd 77 (529)
T 3iyg_A 4 DRSTG--EAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPA----AKVLCELADLQD 77 (529)
T ss_pred chhch--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCChH----HHHHHHHHHHhh
Confidence 44577 999999999999999999999999999999999999999999999999999999998 999999999999
Q ss_pred cccCCCcchHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHc-ccccCC--ch-HHHHHHhhhcC------
Q 007643 145 DLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQ-MSKEVE--DS-ELADVAAVSAG------ 214 (595)
Q Consensus 145 ~~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~-~s~~v~--~~-~L~~va~ts~~------ 214 (595)
+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|++ ++++++ +. +|.++|+||++
T Consensus 78 ~e~GDGTTtvvvLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~~~e~l~~va~tsl~sK~~~~ 157 (529)
T 3iyg_A 78 KEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYISENLIINTDELGRDCLINAAKTSMSSKVIGI 157 (529)
T ss_pred hhhCCChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHhccCcccc
Confidence 999999999999999999999999999999999999999999999999998 999887 44 89999999975
Q ss_pred ChhHHHHHHHHHHHhhc---cCC-----c--EEe--eCCCcccceeEEEeeeEEeecccCCccccCcccCcccccCeeEE
Q 007643 215 NNYEVGNMIAEAMSKVG---RKG-----V--VTL--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLL 282 (595)
Q Consensus 215 ~~~~ls~li~~Av~~v~---~~g-----~--I~v--~~G~~~~ds~~li~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Il 282 (595)
++++|++|+++|+.+++ ++| . |++ .+|+++.|| ++++||+|+++|.||| |++.++||||+
T Consensus 158 ~~~~i~~livdAv~~V~~~~~~g~~~~dv~~I~I~k~~G~~~~ds-~lv~G~v~dk~~~~~~-------m~~~ien~kIl 229 (529)
T 3iyg_A 158 NGDFFANLVVDAVLAIKYTDIRGQPRYPVNSINVLKAHGRSQMES-MLINGYALNCVVGSQG-------MPKRIVNAKIA 229 (529)
T ss_pred cHHHHHHHHHHHHHHHhhhccCCCcccccceEEEEEecCCCccce-EEEeeeEEecCccccc-------CCcccCCceEE
Confidence 47899999999999997 344 2 443 689999998 9999999999999997 45678999999
Q ss_pred EecccC-------------CCHHH-----------HHHHHHHHHHcCCCEEEEeccccHHHHHHHHHHhhcccceeEEee
Q 007643 283 LVDKKI-------------TNARD-----------LINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALK 338 (595)
Q Consensus 283 l~d~~i-------------~~~~~-----------i~~~le~i~~~g~~lvIi~~~i~~~aL~~L~~n~~~g~~~i~av~ 338 (595)
++|+++ +++++ +.++++++.+.|+||||++++|+++|+++|..| +|+||+
T Consensus 230 ll~~~le~~k~e~~~~v~i~~~~~~~~i~~~E~~~l~~~v~kI~~~g~nvvi~~~~I~d~al~~L~~~------gI~av~ 303 (529)
T 3iyg_A 230 CLDFSLQKTKMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEA------GAMAVR 303 (529)
T ss_pred EecCCcccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHc------CCceec
Confidence 999863 44443 456788999999999999999999999999988 467776
Q ss_pred CCCcccchhhhHHHHHHHhCCeEeecCCCcc-ccCCCCCCceeeeEEE---EecCeEEEEccCCCchhhhhHHHHHHHHH
Q 007643 339 APGFGERKSQYLDDIAILTGGTVIRDEVGLA-LDKVGKEVLGNASKVV---LTKDTTTIVGDGSTQDAVSKRVAQIRTLI 414 (595)
Q Consensus 339 ~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~-l~~~~~~~lG~~~~v~---i~~~~~~ii~~~~~~~~i~~r~~~lr~~l 414 (595)
++++++|+|||++|||+++++..+++ .+++++++||+|+.|+ +++++++|+.+|+++...+. .||
T Consensus 304 -----~v~k~~leria~~tGa~iv~~~~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI---~lr--- 372 (529)
T 3iyg_A 304 -----RVLKRDLKRIAKASGATVLSTLANLEGEETFEASMLGQAEEVVQERICDDELILIKNTKARTSASV---ILR--- 372 (529)
T ss_pred -----cCCHHHHHHHHHHhCCeeecchhcccchhccChhhCccceEEEEEEeCCceEEEEEcCCCCceEEE---EEC---
Confidence 67899999999999999999755554 3456788999999997 78999999999987655421 344
Q ss_pred HhhchHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHcC-ccccchHHHHHHHHHHHHHhhcCCchhHHHHHHHH
Q 007643 415 ENAEQDYEREKLNERIAKLSGGVAVIQLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIV 493 (595)
Q Consensus 415 ~~~~~~~~~e~L~ERi~~l~gg~a~i~~~i~Dal~~~k~al~~g-vVpGGGa~e~~ls~~L~~~~~~~~~~~q~~~i~~~ 493 (595)
+++....+| ++|+++|||+++|+++++| +|||||++|++++.+|++++.+.++.+| +++++|
T Consensus 373 -G~t~~~l~E---------------~er~l~Dal~v~r~~v~~~~iVpGGGa~E~~ls~~L~~~~~~~~g~eq-~~i~~f 435 (529)
T 3iyg_A 373 -GANDFMCDE---------------MERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYATSMGSREQ-LAIAEF 435 (529)
T ss_pred -CchHHHHHH---------------HHHHHHHHHHHHHHHhhCCeEEeCCcHHHHHHHHHHHHHhhhcCChHH-HHHHHH
Confidence 333333222 2289999999999999999 9999999999999999999988877766 899999
Q ss_pred HHHHhHHHHHHHHhcCCchHHHHHHhhhcC---C--------CceeeecCCCccccccccCcccchHHHHHHHHHHHHHH
Q 007643 494 KRALCYPLKLIAKNAGVNGSVVSEKVLSSD---N--------HKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVA 562 (595)
Q Consensus 494 a~AL~~ip~~L~~NaG~d~~~vi~kl~~~~---~--------~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a 562 (595)
++||+.||++||+|||+|+.+++.+|++.| + .++|||+.+|++.||++.|||||+.||+++|++|+|+|
T Consensus 436 a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~~~~G~d~~~g~~~d~~~~gV~dp~~vk~~al~~A~e~a 515 (529)
T 3iyg_A 436 ARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLVNGKPRDNKQAGVFEPTIVKVKSLKFATEAA 515 (529)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhccccccccccCceeeeeCCCCCccChhhccCEecHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998643 2 57999999999999999999999999999999999999
Q ss_pred HHHhchhHHhhcc
Q 007643 563 KTFLMSDCVVVEI 575 (595)
Q Consensus 563 ~~iL~iD~iI~~~ 575 (595)
++|||||++|...
T Consensus 516 ~~iL~iD~ii~~~ 528 (529)
T 3iyg_A 516 ITILRIDDLIKLH 528 (529)
T ss_pred HHHHhHHhhhcCC
Confidence 9999999999774
No 17
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.8e-92 Score=783.41 Aligned_cols=458 Identities=21% Similarity=0.310 Sum_probs=408.1
Q ss_pred cccccCCcHHHHHHHHHHHHHHHHhhhhccCcCCCceeeecCCCCcEEecChHHHhccccccCccchHHHHHHHHHHHhc
Q 007643 64 KDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKT 143 (595)
Q Consensus 64 k~~~f~~~~~~~~~~~~~v~~la~~v~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~l~l~hP~enigakLl~~~a~~q 143 (595)
++-.|| .++|..|+.||..|+++|++||||+||||||++++|+|+|||||+||||+|+++||+ |||++++|++|
T Consensus 3 ~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~g~~~iTnDG~tIlk~i~~~hP~----Akll~~~a~~q 76 (515)
T 3iyg_E 3 KSRLMG--LEALKSHIMAAKAVANTMKTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQI----AKLMVELSKSQ 76 (515)
T ss_pred chhhch--HHHHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCCCeEEeCcHHHHHHHcccCCHH----HHHHHHHHHHh
Confidence 345688 999999999999999999999999999999999999999999999999999999998 99999999999
Q ss_pred ccccCCCcchHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHcccccCCc----h-HHHHHHhhhcCC---
Q 007643 144 NDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED----S-ELADVAAVSAGN--- 215 (595)
Q Consensus 144 d~~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~~----~-~L~~va~ts~~~--- 215 (595)
|+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|++++++++. . +|.++|+||+++
T Consensus 77 d~~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~l~~vA~tsl~sK~i 156 (515)
T 3iyg_E 77 DDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARIAIEHLDKISDSVLVDMKNTEPLIQTAKTTLGSKVV 156 (515)
T ss_pred hhhhCCchhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhceecCCCccCHHHHHHHHHHHhcccch
Confidence 99999999999999999999999999999999999999999999999999999988753 3 899999999875
Q ss_pred ---hhHHHHHHHHHHHhhccC-------CcEEe--eCCCcccceeEEEeeeEEeecccCCccccCcccCcccccCeeEEE
Q 007643 216 ---NYEVGNMIAEAMSKVGRK-------GVVTL--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLL 283 (595)
Q Consensus 216 ---~~~ls~li~~Av~~v~~~-------g~I~v--~~G~~~~ds~~li~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill 283 (595)
.+.|++++++|+..+.+. +.|++ .+|++++|+ ++++||+|+++|.||||+ ..++||+|++
T Consensus 157 ~~~~~~l~~l~~dav~~V~~~~~~~~d~~~I~I~k~~Ggs~~ds-~lv~G~~~dk~~~~~~m~-------~~~~~~kIal 228 (515)
T 3iyg_E 157 NSCHRQMAEIAVNAVLTVADMQRRDVDFELIKVEGKVGGRLEDT-KLIKGVIVDKDFSHPQMP-------KQVEDAKIAI 228 (515)
T ss_pred hHHHHHHHHHHHHHHHhhcccccCCCCcccEEEEEecCCCcccc-eEEeeEEEeccccccccc-------ccCCCceEEE
Confidence 478999999999998642 23443 589999998 999999999999999864 4567889988
Q ss_pred eccc-------------CCCHHHH-----------HHHHHHHHHcCCCEEEEeccccHHHHHHHHHHhhcccceeEEeeC
Q 007643 284 VDKK-------------ITNARDL-----------INVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKA 339 (595)
Q Consensus 284 ~d~~-------------i~~~~~i-----------~~~le~i~~~g~~lvIi~~~i~~~aL~~L~~n~~~g~~~i~av~~ 339 (595)
++++ |++++++ .++++++.+.|+||||++++|+++|+++|..|+ |.+++
T Consensus 229 l~~~le~~k~~~~~~~~is~~~~l~~~~~~E~~~l~~~lekI~~~g~~vvi~~~~I~~~al~~L~~~~------I~~v~- 301 (515)
T 3iyg_E 229 LTCPFEPPKPKTKHKLDVTSVEDFKALQKYEKEKFEEMIRQIKETGANLAVCQWGFDDEANHLLLQND------LPAVR- 301 (515)
T ss_pred EcCccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCCCHHHHHHHHHCC------CEEEe-
Confidence 8764 5677765 568999999999999999999999999999984 46665
Q ss_pred CCcccchhhhHHHHHHHhCCeEeecCCCccccCCCCCCceeeeEEEE-----ecCeEEEEccCCCchhhhhHHHHHHHHH
Q 007643 340 PGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL-----TKDTTTIVGDGSTQDAVSKRVAQIRTLI 414 (595)
Q Consensus 340 ~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i-----~~~~~~ii~~~~~~~~i~~r~~~lr~~l 414 (595)
++++.+|+|||++|||++++ +++++++++||+|+.|++ ++++++|+.+|+++..++. .||
T Consensus 302 ----~v~k~~le~ia~~tGa~ii~-----~l~~l~~~~LG~a~~v~~~~ig~~k~~~~~~~g~~~~~~~tI---~lr--- 366 (515)
T 3iyg_E 302 ----WVGGPEIELIAIATGGRIVP-----RFSELTAEKLGFAGLVKEISFGTTKDKMLVIEQCKNSRAVTI---FIR--- 366 (515)
T ss_pred ----ccCHHHHHHHHHHhCCEEec-----ccccCCHHHCCcceEEEEEEeccccceEEEEEcCCCCceEEE---EEe---
Confidence 45589999999999999999 689999999999999986 3489999999988766532 244
Q ss_pred HhhchHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHcC-ccccchHHHHHHHHHHHHHhhcCCchhHHHHHHHH
Q 007643 415 ENAEQDYEREKLNERIAKLSGGVAVIQLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIV 493 (595)
Q Consensus 415 ~~~~~~~~~e~L~ERi~~l~gg~a~i~~~i~Dal~~~k~al~~g-vVpGGGa~e~~ls~~L~~~~~~~~~~~q~~~i~~~ 493 (595)
+++....+ | ++|+++|||+++|+++++| +|||||++|++++.+|++++.+.++.+| +++++|
T Consensus 367 -G~te~~l~----E-----------~kr~i~DAl~~~r~a~~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q-~~i~~~ 429 (515)
T 3iyg_E 367 -GGNKMIIE----E-----------AKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEADKCPTLEQ-YAMRAF 429 (515)
T ss_pred -CCcHHHHH----H-----------HHHHHHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHHHhccCCcHHH-HHHHHH
Confidence 33333222 2 2289999999999999999 9999999999999999999887777665 899999
Q ss_pred HHHHhHHHHHHHHhcCCchHHHHHHhhhc----CCCceeeecCCCccccccccCcccchHHHHHHHHHHHHHHHHHhchh
Q 007643 494 KRALCYPLKLIAKNAGVNGSVVSEKVLSS----DNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSD 569 (595)
Q Consensus 494 a~AL~~ip~~L~~NaG~d~~~vi~kl~~~----~~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD 569 (595)
++||+.||++||+|||+|+.+++.+|++. +++++|||+.+|++.||++.|||||+.||+++|++|+|+|++|||||
T Consensus 430 a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~iD 509 (515)
T 3iyg_E 430 ADALEVIPMALAENSGMNPIQTMTEVRARQVKEVNPALGIDCLHKGTNDMKHQHVIETLIGKKQQISLATQMVRMILKID 509 (515)
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCCCeeeEecCCCcccchHhccCEEcHHHHHHHHHHHHHHHHHHHhHH
Confidence 99999999999999999999999999863 34689999999999999999999999999999999999999999999
Q ss_pred HHhhc
Q 007643 570 CVVVE 574 (595)
Q Consensus 570 ~iI~~ 574 (595)
++|..
T Consensus 510 ~ii~~ 514 (515)
T 3iyg_E 510 DIRKP 514 (515)
T ss_pred HhhcC
Confidence 99975
No 18
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=100.00 E-value=2.7e-94 Score=800.00 Aligned_cols=464 Identities=22% Similarity=0.322 Sum_probs=412.6
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhhccCcCCCceeeec-CCCCcEEecChHHHhccccccCccchHHHHHHHHHHH
Q 007643 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLES-KYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAA 141 (595)
Q Consensus 63 ~k~~~f~~~~~~~~~~~~~v~~la~~v~stlGP~G~~kmI~~-~~g~~~ITnDG~TIlk~l~l~hP~enigakLl~~~a~ 141 (595)
.++..|| +++|..|+.||..|+++|++||||+||||||++ ++|+|+|||||+||||+|+++||. |||++++|+
T Consensus 9 ~~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~~G~~~iTnDG~tIlk~i~~~hP~----Akll~e~a~ 82 (527)
T 3p9d_B 9 QVTEERA--ENARLSAFVGAIAVGDLVKSTLGPKGMDKLLQSASSNTCMVTNDGATILKSIPLDNPA----AKVLVNISK 82 (527)
T ss_dssp CEEEEES--HHHHHHHHHHHHHHHHHHHSCSSSSCCEEEEECTTTCCEECCCCHHHHHHTCCCCCHH----HHHHHHHHH
T ss_pred cchhhhh--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEecCCCCeEEeCCHHHHHHHhccCCHH----HHHHHHHHH
Confidence 5788999 999999999999999999999999999999999 899999999999999999999997 999999999
Q ss_pred hcccccCCCcchHHHHHHHHHHHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHcccccCCc-----h-HHHHHHhhhcC
Q 007643 142 KTNDLAGDGTTTSVVLAQGLIAEGVKVVAA-GANPVLITRGIEKTSKALVSELKQMSKEVED-----S-ELADVAAVSAG 214 (595)
Q Consensus 142 ~qd~~~GDGTTt~vvLa~~Ll~~~~~li~~-g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~~-----~-~L~~va~ts~~ 214 (595)
+||+++||||||+||||++||+++.+++++ |+||+.|++||++|++.++++|++++++++. . +|.++|+||++
T Consensus 83 ~qd~~~GDGTTtavVLA~~Ll~ea~~lv~~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~l~~vA~tSl~ 162 (527)
T 3p9d_B 83 VQDDEVGDGTTSVTVLSAELLREAEKLIDQSKIHPQTIIEGYRLASAAALDALTKAAVDNSHDKTMFREDLIHIAKTTLS 162 (527)
T ss_dssp HHHHHTCSCTTTTTHHHHHHHHHHHHHTC---CCHHHHHHHHHHHHHHHHHHHHHTCBCCCCCHHHHHHHHHHHHHHHHT
T ss_pred HhHhhhCCcHhHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhCccCCCcchhhHHHHHHHHHhccc
Confidence 999999999999999999999999999999 9999999999999999999999999999874 4 89999999987
Q ss_pred C------hhHHHHHHHHHHHhhccCC---cEEee--CCCcccceeEEEeeeEEeecccCCccccCcccCcccccCeeEEE
Q 007643 215 N------NYEVGNMIAEAMSKVGRKG---VVTLE--EGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLL 283 (595)
Q Consensus 215 ~------~~~ls~li~~Av~~v~~~g---~I~v~--~G~~~~ds~~li~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill 283 (595)
+ +++|++|+++|+.++++++ .|+++ .|+++.|+ ++++||+|+++|.||| +..++||+|++
T Consensus 163 sK~~~~~~~~i~~li~dAv~~V~~~~~~~~I~V~k~~gg~~~ds-~lv~G~~~dk~~~~~~--------p~~~~n~kIll 233 (527)
T 3p9d_B 163 SKILSQDKDHFAELATNAILRLKGSTNLEHIQIIKILGGKLSDS-FLDEGFILAKKFGNNQ--------PKRIENAKILI 233 (527)
T ss_dssp TSGGGGGHHHHHHHHHHHHHTTCTTCCTTSSCCCBCCCSSSSCC-CEESSCCCSCCCSSSC--------CSCCSSCEEEE
T ss_pred cCcccchHHHHHHHHHHHHHHhcccCCcceEEEEEcCCCCcccc-EEEEeEEEecccCCCC--------CeeeecceEEE
Confidence 6 6899999999999999887 67664 69999998 9999999999999986 23578999999
Q ss_pred eccc--------------CCCHHHH-----------HHHHHHHHHcCCCEEEEeccccHHHHHHHHHHhhcccceeEEee
Q 007643 284 VDKK--------------ITNARDL-----------INVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALK 338 (595)
Q Consensus 284 ~d~~--------------i~~~~~i-----------~~~le~i~~~g~~lvIi~~~i~~~aL~~L~~n~~~g~~~i~av~ 338 (595)
++++ +++++++ .++++++.+.|+||||++++|+++++++|..+ +|++|+
T Consensus 234 l~~~le~~k~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~l~~I~~~g~~vvi~~~~I~~~al~~L~~~------~i~av~ 307 (527)
T 3p9d_B 234 ANTTLDTDKVKIFGTKFKVDSTAKLAQLEKAEREKMKNKIAKISKFGINTFINRQLIYDYPEQLFTDL------GINSIE 307 (527)
T ss_dssp ECSCSSCCCCSSCCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHTTTCCBEEESSCCCTTTHHHHHHHT------CBCCCC
T ss_pred eccccccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHC------CCEEEe
Confidence 8875 4566655 56788999999999999999999999999987 568887
Q ss_pred CCCcccchhhhHHHHHHHhCCeEeecCCCccccCCCCCCceeeeEEE---EecCeEEEEccCCCchhhhhHHHHHHHHHH
Q 007643 339 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVV---LTKDTTTIVGDGSTQDAVSKRVAQIRTLIE 415 (595)
Q Consensus 339 ~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~---i~~~~~~ii~~~~~~~~i~~r~~~lr~~l~ 415 (595)
++. +.+|+|||++|||++++ +++++++++||+|+.|+ +++++++++.+|++....+. .| .
T Consensus 308 ~~~-----~~dle~ia~~tGa~iv~-----~~~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~tI---~l----r 370 (527)
T 3p9d_B 308 HAD-----FEGVERLALVTGGEVVS-----TFDEPSKCKLGECDVIEEIMLGEQPFLKFSGCKAGEACTI---VL----R 370 (527)
T ss_dssp CCH-----HHHHHHHHHHTCCCCCS-----TTSCCTTSCEECSBCCBCCCSSSCCBCCBCSSCCSCCEEC---BC----C
T ss_pred cCC-----HHHHHHHHHHhCCEEec-----chhhCCHHHCCCCcEEEEEEecceEEEEEECCCCCCEEEE---EE----c
Confidence 554 67799999999999999 58999999999999997 67899999999877654321 23 3
Q ss_pred hhchHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHcC-ccccchHHHHHHHHHHHHHhhcCCchhHHHHHHHHH
Q 007643 416 NAEQDYEREKLNERIAKLSGGVAVIQLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVK 494 (595)
Q Consensus 416 ~~~~~~~~e~L~ERi~~l~gg~a~i~~~i~Dal~~~k~al~~g-vVpGGGa~e~~ls~~L~~~~~~~~~~~q~~~i~~~a 494 (595)
+++....+| .+|+++||||++|+++++| +|||||++|++++.+|++++.+.++.+| +++++|+
T Consensus 371 g~te~~l~E---------------~kr~i~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq-~~i~~~a 434 (527)
T 3p9d_B 371 GATDQTLDE---------------AERSLHDALSVLSQTTKETRTVLGGGCAEMVMSKAVDTEAQNIDGKKS-LAVEAFA 434 (527)
T ss_dssp TTCTTHHHH---------------HHTHHHHHHHHHHHHHHCCCEEETTTHHHHHHHHHHHHHHHHHCSHHH-HHHHHHH
T ss_pred CCCHHHHHH---------------HHHHHHHHHHHHHHHHhcCCcccCCcHHHHHHHHHHHHHHhccCcHHH-HHHHHHH
Confidence 444433333 2289999999999999999 9999999999999999999877767655 8999999
Q ss_pred HHHhHHHHHHHHhcCCchHHHHHHhhhc---CCCceeeecCCCccccccccCcccchHHHHHHHHHHHHHHHHHhchhHH
Q 007643 495 RALCYPLKLIAKNAGVNGSVVSEKVLSS---DNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCV 571 (595)
Q Consensus 495 ~AL~~ip~~L~~NaG~d~~~vi~kl~~~---~~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~i 571 (595)
+||+.||++||+|||+|+.+++.+|++. +++++|||+.+|++.||++.|||||+.||+++|++|+|+|++|||||++
T Consensus 435 ~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id~i 514 (527)
T 3p9d_B 435 RALRQLPTILADNAGFDSSELVSKLRSSIYNGISTSGLDLNNGTIADMRQLGIVESYKLKRAVVSSASEAAEVLLRVDNI 514 (527)
T ss_dssp HHHHHHHHHHHHHHTSCSHHHHHHHHHHHHHTCSCCCCCSSSTTCCCHHHHTCEEETTHHHHHHHHHHHHHHHHHHCCEE
T ss_pred HHHHHHHHHHHhccCCCHHHHHHHHHHHHhcCCCceeEECCCCCCcchHhccCEEcHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 9999999999999999999999999874 3568999999999999999999999999999999999999999999999
Q ss_pred hhccCCCCC
Q 007643 572 VVEIKEPEP 580 (595)
Q Consensus 572 I~~~~~~~~ 580 (595)
|...|+++.
T Consensus 515 i~~~~~~~~ 523 (527)
T 3p9d_B 515 IRARPRTAN 523 (527)
T ss_dssp EEEC-----
T ss_pred HhcCCcccC
Confidence 998876543
No 19
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=3.4e-92 Score=781.18 Aligned_cols=454 Identities=22% Similarity=0.306 Sum_probs=405.2
Q ss_pred ccCCcHHHHHHHHHHHHHHHHhhhhccCcCCCceeeecCCCCcEEecChHHHhccccccCccchHHHHHHHHHHHhcccc
Q 007643 67 HFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDL 146 (595)
Q Consensus 67 ~f~~~~~~~~~~~~~v~~la~~v~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~l~l~hP~enigakLl~~~a~~qd~~ 146 (595)
.+| .++|..|+.||..|+++|++||||+||||||++++|+|+|||||+||||+|+++||+ |||++++|++||++
T Consensus 7 ~~g--~~~~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----akll~~~a~~qd~~ 80 (518)
T 3iyg_D 7 DKP--AQIRFSNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPA----ARMLVELSKAQDIE 80 (518)
T ss_pred hhh--HHHHHHHHHHHHHHHHHHHhccCCCCCceeeeCCCCCeEEECCHHHHHHHcccchHH----HHHHHHHHHHhhhh
Confidence 455 889999999999999999999999999999999999999999999999999999999 99999999999999
Q ss_pred cCCCcchHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHcccccCC--ch-HHHHHHhhhcCCh------h
Q 007643 147 AGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE--DS-ELADVAAVSAGNN------Y 217 (595)
Q Consensus 147 ~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~--~~-~L~~va~ts~~~~------~ 217 (595)
+||||||+||||++||+++.+++++|+||+.|++||++|++.++++|++++++++ +. +|.++|+||++++ +
T Consensus 81 ~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~l~~vA~tsl~sK~~~~~~~ 160 (518)
T 3iyg_D 81 AGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEILTDMSRPVELSDRETLLNSAATSLNSKVVSQYSS 160 (518)
T ss_pred hCCCceeHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHheeeCCCCChHHHHHHhHhhhccccchhhHH
Confidence 9999999999999999999999999999999999999999999999999999987 45 8999999999875 8
Q ss_pred HHHHHHHHHHHhhcc---CCc-----EEee--CCCcccceeEEEeeeEEeecccCCccccCcccCcccccCeeEEEeccc
Q 007643 218 EVGNMIAEAMSKVGR---KGV-----VTLE--EGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKK 287 (595)
Q Consensus 218 ~ls~li~~Av~~v~~---~g~-----I~v~--~G~~~~ds~~li~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~ 287 (595)
+|++|+++|+.++++ ++. |+++ .|+++.|+ ++++||+|+++|.| . ||..++||+|++++++
T Consensus 161 ~i~~livdAv~~V~~~~~~~~~d~~~I~V~k~~Gg~~~ds-~lv~G~~~dk~~~~-~-------mp~~i~n~kIlll~~~ 231 (518)
T 3iyg_D 161 LLSPMSVDAVMKVIDPATATSVDLRDIKIVKKLGGTIDDC-ELVEGLVLTQKVAN-S-------GITRVEKAKIGLIQFC 231 (518)
T ss_pred HHHHHHHHHHHHhhccccCCCcccceEEEEEcCCCChhhh-eEeccEEEeccccc-C-------CCccccCceEEEEEee
Confidence 999999999999985 454 5553 78999998 99999999999987 2 5567889999998876
Q ss_pred C-------------CCHH-----------HHHHHHHHHHHcCCCEEEE-----eccccHHHHHHHHHHhhcccceeEEee
Q 007643 288 I-------------TNAR-----------DLINVLEDAIRGAYPILII-----AEDIEQEALATLVVNKLRGALKIAALK 338 (595)
Q Consensus 288 i-------------~~~~-----------~i~~~le~i~~~g~~lvIi-----~~~i~~~aL~~L~~n~~~g~~~i~av~ 338 (595)
+ ++++ ++.++++++.+.|+||||+ +++|+++|+++|..+ +|+||+
T Consensus 232 Le~~k~~~~~~i~is~~~~~~~~~~~E~~~l~~~le~I~~~g~~lvi~~k~i~~~~I~~~Al~~L~~~------~I~av~ 305 (518)
T 3iyg_D 232 LSAPKTDMDNQIVVSDYVQMDRVLREERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNKM------KIMVVK 305 (518)
T ss_pred ccccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccccccCcCHHHHHHHHHc------CcEEEe
Confidence 3 5554 3577899999999999999 899999999999987 689999
Q ss_pred CCCcccchhhhHHHHHHHhCCeEeecCCCccccCCCCCCceeeeEEEE---ec-CeEEEEccCCC-chhhhhHHHHHHHH
Q 007643 339 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL---TK-DTTTIVGDGST-QDAVSKRVAQIRTL 413 (595)
Q Consensus 339 ~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i---~~-~~~~ii~~~~~-~~~i~~r~~~lr~~ 413 (595)
+|+ +.+|+|||++|||++++ +++++++++||+|+.|++ ++ +++++|.+|.+ ....+ ..||
T Consensus 306 ~~~-----~~~le~ia~~tGa~ii~-----~l~~l~~~~LG~a~~v~~~~~g~~~~~~~~~g~~~~~~~~t---I~lr-- 370 (518)
T 3iyg_D 306 DIE-----REDIEFICKTIGTKPVA-----HVDQFTADMLGSAELAEEVSLNGSGKLIKITGCASPGKTVT---IVVR-- 370 (518)
T ss_pred cCC-----HHHHHHHHHHhCCEEec-----ccccCCHHHCCcCcEEEEEEeCCCceEEEEECCCCCCceEE---EEEC--
Confidence 776 46799999999999999 589999999999999975 45 68899999876 33322 1243
Q ss_pred HHhhchHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHcC-ccccchHHHHHHHHHHHHHhhcCCchhHHHHHHH
Q 007643 414 IENAEQDYEREKLNERIAKLSGGVAVIQLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADI 492 (595)
Q Consensus 414 l~~~~~~~~~e~L~ERi~~l~gg~a~i~~~i~Dal~~~k~al~~g-vVpGGGa~e~~ls~~L~~~~~~~~~~~q~~~i~~ 492 (595)
+++. ++.+ | ++|+++|||+++|+++++| +|||||++|++++.+|++++.+.++.+| +++++
T Consensus 371 --G~te-~~l~---E-----------~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q-~~i~~ 432 (518)
T 3iyg_D 371 --GSNK-LVIE---E-----------AERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMES-YCIRA 432 (518)
T ss_pred --CCCH-HHHH---H-----------HHHHHHHHHHHHHHHHhCCCEeecCcHHHHHHHHHHHHHhhcCChHHH-HHHHH
Confidence 3333 3222 2 2289999999999999999 9999999999999999999887777655 89999
Q ss_pred HHHHHhHHHHHHHHhcCCchHHHHHHhhhc---CCCceeeecCCCccccccccCcccchHHHHHHHHHHHHHHHHHhchh
Q 007643 493 VKRALCYPLKLIAKNAGVNGSVVSEKVLSS---DNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSD 569 (595)
Q Consensus 493 ~a~AL~~ip~~L~~NaG~d~~~vi~kl~~~---~~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD 569 (595)
|++||+.||++||+|||+|+.+++.+|++. +++++|||+.+|++.||++.|||||+.||+++|++|+|+|++|||||
T Consensus 433 ~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD 512 (518)
T 3iyg_D 433 FADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKTTGINVRKGGISNILEELVVQPLLVSVSALTLATETVRSILKID 512 (518)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhccCCceeEeCCCCcccchhhccCEEcHHHHHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999999999874 35689999999999999999999999999999999999999999999
Q ss_pred HHhhc
Q 007643 570 CVVVE 574 (595)
Q Consensus 570 ~iI~~ 574 (595)
+||+.
T Consensus 513 ~ii~~ 517 (518)
T 3iyg_D 513 DVVNT 517 (518)
T ss_pred ceEec
Confidence 99975
No 20
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=100.00 E-value=1.3e-92 Score=790.48 Aligned_cols=468 Identities=23% Similarity=0.325 Sum_probs=412.3
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhhccCcCCCceeeecCCCCcEEecChHHHhccccccCccchHHHHHHHHHHHh
Q 007643 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (595)
Q Consensus 63 ~k~~~f~~~~~~~~~~~~~v~~la~~v~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~l~l~hP~enigakLl~~~a~~ 142 (595)
.++..|| .++|..|+.||..|+++|+|||||+||||||++++|+|+|||||+||||+|+++||+ |||++++|++
T Consensus 37 ~~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~ 110 (562)
T 3p9d_E 37 NKKRQHG--LEAKKSHILAARSVASIIKTSLGPRGLDKILISPDGEITITNDGATILSQMELDNEI----AKLLVQLSKS 110 (562)
T ss_dssp CCSCSHH--HHHHHHHHHHHHHHHHHTTTSSSTTCCEEEEECSSSCEEEESCHHHHHHHSCCCSHH----HHHHHHHHHH
T ss_pred cceecch--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCEEEECCHHHHHHHccCCCHH----HHHHHHHHHH
Confidence 3678899 999999999999999999999999999999999999999999999999999999998 9999999999
Q ss_pred cccccCCCcchHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHcccccCCc-------hHHHHHHhhhcCC
Q 007643 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED-------SELADVAAVSAGN 215 (595)
Q Consensus 143 qd~~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~~-------~~L~~va~ts~~~ 215 (595)
||+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|++++++++. ++|.++|+||+++
T Consensus 111 qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~e~L~~vA~tSl~s 190 (562)
T 3p9d_E 111 QDDEIGDGTTGVVVLASALLDQALELIQKGIHPIKIANGFDEAAKLAISKLEETCDDISASNDELFRDFLLRAAKTSLGS 190 (562)
T ss_dssp HHHHTSSCTTHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHTTTTTSSSSBCCCSSCHHHHHHHHHHHHSS
T ss_pred HHhhcCCCcccHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccCcCCCcchhhHHHHHHHHHHhcCC
Confidence 999999999999999999999999999999999999999999999999999999988763 2699999999865
Q ss_pred ------hhHHHHHHHHHHHhhccC-------CcE--EeeCCCcccceeEEEeeeEEeecccCCccccCcccCcccccCee
Q 007643 216 ------NYEVGNMIAEAMSKVGRK-------GVV--TLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCK 280 (595)
Q Consensus 216 ------~~~ls~li~~Av~~v~~~-------g~I--~v~~G~~~~ds~~li~G~~~~~g~~~p~~~~~~~~~~~~~~n~~ 280 (595)
.++|++++++|+..+.+. +.| ...+|++++|| ++++||+|+++|.||||+++.+ .+..++||+
T Consensus 191 K~i~~~~d~la~l~vdAV~~V~~~~~~~~d~~~I~I~k~~Ggs~~ds-~lveGmv~dk~~~sp~m~~~~~-~~~~~~~~k 268 (562)
T 3p9d_E 191 KIVSKDHDRFAEMAVEAVINVMDKDRKDVDFDLIKMQGRVGGSISDS-KLINGVILDKDFSHPQMPKCVL-PKEGSDGVK 268 (562)
T ss_dssp STTTTTHHHHHHHHHHHHHTSSTTTCSCCCCCCCEEEEESSSCGGGC-EEESSEEESSCCCTTSCCC------TTCSSCE
T ss_pred chhHHHHHHHHHHHHHHheeecccccCCCCcccEEEEEecCCChhhh-ceeeeEEEecCCCCCCcCcccc-cccccccce
Confidence 478999999999998652 233 34689999999 9999999999999999876432 223358999
Q ss_pred EEEeccc-------------CCCHHH-----------HHHHHHHHHHcCCCEEEEeccccHHHHHHHHHHhhcccceeEE
Q 007643 281 LLLVDKK-------------ITNARD-----------LINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAA 336 (595)
Q Consensus 281 Ill~d~~-------------i~~~~~-----------i~~~le~i~~~g~~lvIi~~~i~~~aL~~L~~n~~~g~~~i~a 336 (595)
|++++++ |+++++ +.++++++.+.|+||||++++|+++|+++|..|+ |.+
T Consensus 269 Iall~~~le~~k~~~~~~~~Iss~~~~~~~~~~E~~~l~~~lekI~~~g~~vvI~~~~I~~~Al~~L~~~~------I~~ 342 (562)
T 3p9d_E 269 LAILTCPFEPPKPKTKHKLDISSVEEYQKLQTYEQDKFKEMIDDVKKAGADVVICQWGFDDEANHLLLQND------LPA 342 (562)
T ss_dssp ECEEESCCSSCCCSSCCCCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHTCSCCEECSSCCSHHHHHHHTTT------CCC
T ss_pred EEEecccccccccccCceEEECCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCHHHHHHHHHCC------CEE
Confidence 9999875 455555 5688999999999999999999999999999884 455
Q ss_pred eeCCCcccchhhhHHHHHHHhCCeEeecCCCccccCCCCCCceeeeEEEE-----ecCeEEEEccCCCchhhhhHHHHHH
Q 007643 337 LKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL-----TKDTTTIVGDGSTQDAVSKRVAQIR 411 (595)
Q Consensus 337 v~~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i-----~~~~~~ii~~~~~~~~i~~r~~~lr 411 (595)
|+ ++++.+|+|||++|||++++ +++++++++||+|+.|++ ++++++|+.+|+++..++. .||
T Consensus 343 v~-----~v~k~~le~ia~~TGa~iis-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~i~g~~~~~~~TI---llr 409 (562)
T 3p9d_E 343 VR-----WVGGQELEHIAISTNGRIVP-----RFQDLSKDKLGTCSRIYEQEFGTTKDRMLIIEQSKETKTVTC---FVR 409 (562)
T ss_dssp EE-----CCCTTTHHHHHHHHCCCEEE-----SSSCCCTTSCEECSCEEEECCSSSSCCEEEECCCSCCSCCEE---EEE
T ss_pred Ee-----ccCHHHHHHHHHHhCCEEEe-----ccccCCHHHCCcceEEEEEEeccCCceEEEEecCCCCCeEEE---EEe
Confidence 55 45688999999999999999 689999999999999987 3689999999987766532 233
Q ss_pred HHHHhhchHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHcC-ccccchHHHHHHHHHHHHHhhcCCchhHHHHH
Q 007643 412 TLIENAEQDYEREKLNERIAKLSGGVAVIQLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGA 490 (595)
Q Consensus 412 ~~l~~~~~~~~~e~L~ERi~~l~gg~a~i~~~i~Dal~~~k~al~~g-vVpGGGa~e~~ls~~L~~~~~~~~~~~q~~~i 490 (595)
+++....+| ++|+++|||+++|+++++| +|||||++|++++.+|++++.+.++.+| +++
T Consensus 410 ----G~te~~l~E---------------~kr~i~DAL~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq-~~i 469 (562)
T 3p9d_E 410 ----GSNKMIVDE---------------AERALHDSLCVVRNLVKDSRVVYGGGAAEVTMSLAVSEEADKQRGIDQ-YAF 469 (562)
T ss_dssp ----CTTTTTHHH---------------HTHHHHHHHHHHHHHHHSCCEEETTTHHHHHHHHHHHHHHHTTCTTHH-HHH
T ss_pred ----CCCHHHHHH---------------HHHHHHHHHHHHHHHHhCCCcCCCCcHHHHHHHHHHHHHhccCccHHH-HHH
Confidence 343333222 2289999999999999999 9999999999999999999888777665 899
Q ss_pred HHHHHHHhHHHHHHHHhcCCchHHHHHHhhhc----CCCceeeecCCCccccccccCcccchHHHHHHHHHHHHHHHHHh
Q 007643 491 DIVKRALCYPLKLIAKNAGVNGSVVSEKVLSS----DNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFL 566 (595)
Q Consensus 491 ~~~a~AL~~ip~~L~~NaG~d~~~vi~kl~~~----~~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL 566 (595)
++|++||+.||++||+|||+|+.+++.+|++. ++.++|||+.+|++.||++.|||||+.||+++|++|+|+|++||
T Consensus 470 ~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL 549 (562)
T 3p9d_E 470 RGFAQALDTIPMTLAENSGLDPIGTLSTLKSKQLKEKISNIGVDCLGYGSNDMKELFVVDPFIGKKQQILLATQLCRMIL 549 (562)
T ss_dssp HHHHHHHTHHHHHHHHTTTSCHHHHHHHHHHHHHHTTTSSBCCBTTTTBCCBTTTTTCEEEHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCCceeEecCCCcccchHhccCEEcHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999863 35689999999999999999999999999999999999999999
Q ss_pred chhHHhhccCC
Q 007643 567 MSDCVVVEIKE 577 (595)
Q Consensus 567 ~iD~iI~~~~~ 577 (595)
|||++|...+.
T Consensus 550 ~iD~ii~~~~~ 560 (562)
T 3p9d_E 550 KIDNVIISGKD 560 (562)
T ss_dssp TEEEEEECCC-
T ss_pred HHHHhhcCCCC
Confidence 99999987654
No 21
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.1e-91 Score=776.56 Aligned_cols=453 Identities=21% Similarity=0.312 Sum_probs=406.4
Q ss_pred HHHHHHHHHHHHHHHHhhhhccCcCCCceeeecCCCCcEEecChHHHhccccccCccchHHHHHHHHHHHhcccccCCCc
Q 007643 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (595)
Q Consensus 72 ~~~~~~~~~~v~~la~~v~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~l~l~hP~enigakLl~~~a~~qd~~~GDGT 151 (595)
.++|..|+.||..|+++|+|||||+||||||+++.|+|+|||||+||||+|+++||+ |||++++|++||+++||||
T Consensus 8 ~~~~~~ni~a~~~la~~vkttLGP~G~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~qd~e~GDGT 83 (515)
T 3iyg_G 8 RKVQSGNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHPA----AKSMIEISRTQDEEVGDGT 83 (515)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcCCCCCeEEEECCCCCeEEECCHHHHHHhcccCCHH----HHHHHHHHHHhhhhhCCCh
Confidence 779999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHcccccCCc--h-HHHHHHhhhcCC------hhHHHHH
Q 007643 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED--S-ELADVAAVSAGN------NYEVGNM 222 (595)
Q Consensus 152 Tt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~~--~-~L~~va~ts~~~------~~~ls~l 222 (595)
||+||||++||+++.+++++|+||+.|++||++|++.++++|++++++++. . .|.++|+||+++ .+.++++
T Consensus 84 TtvvvLAgeLL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~l~~va~tsl~sK~i~~~~~~~~~i 163 (515)
T 3iyg_G 84 TSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMISTLKKISIPVDTSNRDTMLNIINSSITTKVISRWSSLACNI 163 (515)
T ss_pred hhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHhcCCchhhHHHHHHHH
Confidence 999999999999999999999999999999999999999999999998874 3 899999999864 4678899
Q ss_pred HHHHHHhhccC--C----------cEEeeCCCcccceeEEEeeeEEeecccCCccccCcccCcccccCeeEEEecc----
Q 007643 223 IAEAMSKVGRK--G----------VVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDK---- 286 (595)
Q Consensus 223 i~~Av~~v~~~--g----------~I~v~~G~~~~ds~~li~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~---- 286 (595)
+++|+..+.++ + .|.+.+|++++|| ++++||+|+++|.||. |+++++||+|+++|+
T Consensus 164 ~vdav~~V~~~~~~~~~~dl~~~I~I~ki~Ggs~~ds-~lv~G~v~dk~~~~~~-------m~~~ien~kIll~~~~Le~ 235 (515)
T 3iyg_G 164 ALDAVKTVQFEENGRKEIDIKKYARVEKIPGGIIEDS-CVLRGVMINKDVTHPR-------MRRYIKNPRIVLLDSSLEY 235 (515)
T ss_pred HHHHHHhcccccCCCcccchhheeEEEEecCCCcccc-eEEeeEEEeCCCCCCC-------CcceeeeeEEEEEcccccc
Confidence 99999988632 2 1333589999999 9999999999999984 778899999999998
Q ss_pred ---------cCCCHHHHHHHHH-----------HHHHcCCCEEEEeccccHHHHHHHHHHhhcccceeEEeeCCCcccch
Q 007643 287 ---------KITNARDLINVLE-----------DAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERK 346 (595)
Q Consensus 287 ---------~i~~~~~i~~~le-----------~i~~~g~~lvIi~~~i~~~aL~~L~~n~~~g~~~i~av~~~~~~~~~ 346 (595)
+|++++++.++++ ++.+.|++|||++++|++.++++|..+ +|+|| ++++
T Consensus 236 ~k~e~~~~v~is~~~~l~~~l~~E~~~l~~~v~kI~~~g~~vIi~~~~I~~~al~~L~~~------~I~av-----~~~~ 304 (515)
T 3iyg_G 236 KKGESQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLKPDVVITEKGISDLAQHYLMRA------NITAI-----RRVR 304 (515)
T ss_pred cccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECCccCHHHHHHHHHC------Cceee-----ccCC
Confidence 5788888888776 889999999999999999999998864 56665 5888
Q ss_pred hhhHHHHHHHhCCeEeecCCCccccCCCCCCcee-eeEEEE---ecCeEEEEccCCCchhhhhHHHHHHHHHHhhchHHH
Q 007643 347 SQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGN-ASKVVL---TKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYE 422 (595)
Q Consensus 347 ~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~-~~~v~i---~~~~~~ii~~~~~~~~i~~r~~~lr~~l~~~~~~~~ 422 (595)
+.+|+|||++|||++++ +++++++++||+ |+.|++ ++++++|+.+|+++...+. .|| +++....
T Consensus 305 k~~leria~~tGa~ii~-----~l~~l~~~~LG~~a~~v~~~~~g~~~~~~i~g~~~~~~~TI---llr----G~t~~~l 372 (515)
T 3iyg_G 305 KTDNNRIARACGARIVS-----RPEELREEDVGTGAGLLEIKKIGDEYFTFITECKDPKACTI---LLR----GASKEIL 372 (515)
T ss_pred HHHHHHHHHHhCCeeec-----cccccChhhcCCcccEEEEEEECCceEEEEeCCCCCCeEEE---EEc----CCCHHHH
Confidence 99999999999999999 589999999999 999974 5679999999988765432 344 3443333
Q ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHcC-ccccchHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhHHH
Q 007643 423 REKLNERIAKLSGGVAVIQLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPL 501 (595)
Q Consensus 423 ~e~L~ERi~~l~gg~a~i~~~i~Dal~~~k~al~~g-vVpGGGa~e~~ls~~L~~~~~~~~~~~q~~~i~~~a~AL~~ip 501 (595)
+| ++|+++|||+++|++++++ +|||||++|++++.+|++++++.++.+| +++++|++||+.||
T Consensus 373 ~E---------------~er~i~Dal~~~r~~~~~~~ivpGGGa~e~~~~~~L~~~~~~~~g~eq-~~i~~~a~Ale~ip 436 (515)
T 3iyg_G 373 SE---------------VERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAHALTEKSKAMTGVEQ-WPYRAVAQALEVIP 436 (515)
T ss_pred HH---------------HHHHHHHHHHHHHHHhhCCcEEeCCCHHHHHHHHHHHHHhhccCcHHH-HHHHHHHHHHHHHH
Confidence 33 2289999999999999775 9999999999999999999888877766 89999999999999
Q ss_pred HHHHHhcCCchHHHHHHhhhcC----CCceeeecCCCccccccccCcccchHHHHHHHHHHHHHHHHHhchhHHhhcc
Q 007643 502 KLIAKNAGVNGSVVSEKVLSSD----NHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEI 575 (595)
Q Consensus 502 ~~L~~NaG~d~~~vi~kl~~~~----~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~~~ 575 (595)
++||+|||+|+.+++.+|++.| +.++|||+.+|++.||++.|||||+.||+++|++|+|+|++|||||++|...
T Consensus 437 ~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~~~gi~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~ 514 (515)
T 3iyg_G 437 RTLIQNCGASTIRLLTSLRAKHTQENCETWGVNGETGTLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSGH 514 (515)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHhcCCCceeeeCCCCcccccHHcCCEEcHHHHHHHHHHHHHHHHHHHHHHheeecC
Confidence 9999999999999999998753 4579999999999999999999999999999999999999999999999754
No 22
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=3.7e-91 Score=772.19 Aligned_cols=455 Identities=23% Similarity=0.355 Sum_probs=400.1
Q ss_pred cccCCcHHHHHHHHHHHHHHHHhhhhccCcCCCceeeecCCCCcEEecChHHHhccccccCccchHHHHHHHHHHHhccc
Q 007643 66 LHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTND 145 (595)
Q Consensus 66 ~~f~~~~~~~~~~~~~v~~la~~v~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~l~l~hP~enigakLl~~~a~~qd~ 145 (595)
+..| .+++..|+.+|..|+++|+|||||+||||||++++|+|+|||||+||||+|+++||+ |+|++++|++||+
T Consensus 5 ~~~~--~~a~~~ni~a~~~la~~vkttlGPkG~~kml~~~~g~~~iTnDG~tIlk~i~v~hp~----akll~~~a~~qd~ 78 (517)
T 3iyg_Z 5 VARA--QAALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDGNVLLHEMQIQHPT----ASLIAKVATAQDD 78 (517)
T ss_pred hhhH--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHH----HHHHHHHHHHHHH
Confidence 3445 889999999999999999999999999999999999999999999999999999998 9999999999999
Q ss_pred ccCCCcchHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHcccccCC-ch-HHHHHHhhhcCC------hh
Q 007643 146 LAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE-DS-ELADVAAVSAGN------NY 217 (595)
Q Consensus 146 ~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~-~~-~L~~va~ts~~~------~~ 217 (595)
++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|++++++++ +. +|.++|+||+++ .+
T Consensus 79 e~GDGTTtvvvLa~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~L~~va~tsl~sKi~~~~~d 158 (517)
T 3iyg_Z 79 ITGDGTTSNVLIIGELLKQADLYISEGLHPRIITEGFEAAKEKALQFLEQVKVSKEMDRETLIDVARTSLRTKVHAELAD 158 (517)
T ss_pred HhCCCceeHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhhCcCCCCCHHHHHHHHHHHhccccchhHHH
Confidence 99999999999999999999999999999999999999999999999999999887 55 899999999865 47
Q ss_pred HHHHHHHHHHHhhccCC--------cEEeeCCCcccceeEEEeeeEEeecccCCccccCcccCcccccCeeEEEecccC-
Q 007643 218 EVGNMIAEAMSKVGRKG--------VVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKI- 288 (595)
Q Consensus 218 ~ls~li~~Av~~v~~~g--------~I~v~~G~~~~ds~~li~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~i- 288 (595)
.|++++++|+..+.+.+ .|.+.+|++..|+ ++++||+|+++|.||| |+++++||+|+++|+++
T Consensus 159 ~la~l~vdaV~~V~~~~~~~dl~~I~I~k~~Gg~~~ds-~lv~G~v~dk~~~~p~-------m~~~ien~kIll~~~~le 230 (517)
T 3iyg_Z 159 VLTEAVVDSILAIKKQDEPIDLFMVEIMEMKHKSETDT-SLIRGLVLDHGARHPD-------MKKRVEDAYILTCNVSLE 230 (517)
T ss_pred HHHHHHHHHhheeccCCCcCChhHheeeeecCCCcccc-ceEeeEEEeccCCCCC-------ccccccCCeEEEeccccc
Confidence 89999999999886532 1445689999999 9999999999999997 77889999999999864
Q ss_pred ------------CCHHHHH-----------HHHHHHHHcCC--------CE-EEEeccccHHHHHHHHHHhhcccceeEE
Q 007643 289 ------------TNARDLI-----------NVLEDAIRGAY--------PI-LIIAEDIEQEALATLVVNKLRGALKIAA 336 (595)
Q Consensus 289 ------------~~~~~i~-----------~~le~i~~~g~--------~l-vIi~~~i~~~aL~~L~~n~~~g~~~i~a 336 (595)
++++++. ..++.+...+. |+ ||++++|+++++++|..+ +|++
T Consensus 231 ~~k~e~~~~~~i~~~~~l~~~~~~E~~~i~~~v~~I~~~~~~v~~~~~~~lvIi~~~~I~d~al~~L~~~------gI~~ 304 (517)
T 3iyg_Z 231 YEKTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKKKVCGDSDKGFVVINQKGIDPFSLDALAKE------GIIA 304 (517)
T ss_pred ccccccceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCceEEEecccCCHHHHHHHHHC------CCEE
Confidence 4444443 34555555544 44 555699999999999875 4677
Q ss_pred eeCCCcccchhhhHHHHHHHhCCeEeecCCCccccCCCCCC-ceeeeEE---EEecCeEEEEccCCCchhhhhHHHHHHH
Q 007643 337 LKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEV-LGNASKV---VLTKDTTTIVGDGSTQDAVSKRVAQIRT 412 (595)
Q Consensus 337 v~~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~-lG~~~~v---~i~~~~~~ii~~~~~~~~i~~r~~~lr~ 412 (595)
|+ ++++.+|+|||++|||++++ +++++++++ ||+|+ | .+++++++|+.+|+++..++ ..||
T Consensus 305 v~-----~v~~~~leria~~tGa~iv~-----~l~~l~~~~~LG~a~-v~e~~ig~~~~~~~~g~~~~~~~T---I~lr- 369 (517)
T 3iyg_Z 305 LR-----RAKRRNMERLTLACGGIALN-----SLDDLNPDCLLGHAG-VYEYTLGEEKFTFIEKCNNPRSVT---LLIK- 369 (517)
T ss_pred EE-----ecCHHHHHHHHHHhCCEEec-----chhhCcccccCCcce-EEEEEEcCceEEEEeCCCCchhhe---eeec-
Confidence 76 55688999999999999999 699999999 99999 9 57899999999998766542 1344
Q ss_pred HHHhhchHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHcC-ccccchHHHHHHHHHHHHHhhcCCchhHHHHHH
Q 007643 413 LIENAEQDYEREKLNERIAKLSGGVAVIQLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGAD 491 (595)
Q Consensus 413 ~l~~~~~~~~~e~L~ERi~~l~gg~a~i~~~i~Dal~~~k~al~~g-vVpGGGa~e~~ls~~L~~~~~~~~~~~q~~~i~ 491 (595)
+++....+| ++|+++|||+++|+++++| +|||||++|++++.+|++++.+.++.+| ++++
T Consensus 370 ---G~t~~~l~E---------------~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq-~~i~ 430 (517)
T 3iyg_Z 370 ---GPNKHTLTQ---------------IKDAIRDGLRAVKNAIDDGCVVPGAGAVEVAMAEALVKYKPSVKGRAQ-LGVQ 430 (517)
T ss_pred ---CCcHHHHHH---------------HHHHHHHHHHHHHHHHhcceEecCccHHHHHHHHHHHHHhccCCHHHH-HHHH
Confidence 344333232 2289999999999999999 9999999999999999999887766655 8999
Q ss_pred HHHHHHhHHHHHHHHhcCCchHHHHHHhhhcC---CCceeeecCCCccccccccCcccchHHHHHHHHHHHHHHHHHhch
Q 007643 492 IVKRALCYPLKLIAKNAGVNGSVVSEKVLSSD---NHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMS 568 (595)
Q Consensus 492 ~~a~AL~~ip~~L~~NaG~d~~~vi~kl~~~~---~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~i 568 (595)
+|++||+.+|++||+|||+|+.+++.+|++.| ++++|||+.+|++.||++.|||||+.||+++|++|+|+|++||||
T Consensus 431 ~~a~ALe~iP~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~i 510 (517)
T 3iyg_Z 431 AFADALLIIPKVLAQNSGFDLQETLVKVQAEHSESGQLVGVDLNTGEPMVAAEAGIWDNYCVKKQLLHSCTVIATNILLV 510 (517)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCcEEEeCCCCcccchhhccCeecHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998753 568999999999999999999999999999999999999999999
Q ss_pred hHHhhc
Q 007643 569 DCVVVE 574 (595)
Q Consensus 569 D~iI~~ 574 (595)
|++|..
T Consensus 511 D~ii~~ 516 (517)
T 3iyg_Z 511 DEIMRA 516 (517)
T ss_pred HHHhhC
Confidence 999864
No 23
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=3.6e-91 Score=772.52 Aligned_cols=450 Identities=20% Similarity=0.281 Sum_probs=398.5
Q ss_pred HHHHHHHHHHHHHHHHhhhhccCcCCCceeeecCCCCcEEecChHHHhccccccCccchHHHHHHHHHHHhcccccCCCc
Q 007643 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (595)
Q Consensus 72 ~~~~~~~~~~v~~la~~v~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~l~l~hP~enigakLl~~~a~~qd~~~GDGT 151 (595)
+++|..|+.||..|+++|++||||+||||||++++|+|+|||||+||||+|+++||+ |||++++|++||+++||||
T Consensus 10 ~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~qd~~~GDGT 85 (512)
T 3iyg_Q 10 EEAVYRNIQACKELAQTTRTAYGPNGMNKMVINHLEKLFVTNDAATILRELEVQHPA----AKMIVMASHMQEQEVGDGT 85 (512)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCCHH----HHHHHHHHHHhhhhhCCCh
Confidence 689999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHcc----cccCCch-HHHHHHhhhcCC-----hhHHHH
Q 007643 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQM----SKEVEDS-ELADVAAVSAGN-----NYEVGN 221 (595)
Q Consensus 152 Tt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~----s~~v~~~-~L~~va~ts~~~-----~~~ls~ 221 (595)
||+||||++||+++.+++++|+||+.|++||++|++.++++|+++ ++++++. +|.++|+||+++ +++|++
T Consensus 86 TtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~~~~~~~~~~~~~~l~~va~tsl~sK~~~~~~~i~~ 165 (512)
T 3iyg_Q 86 NFVLVFAGALLELAEELLRLGLSVSEVIEGYEIACKKAHEILPDLVCCSAKNLRDVDEVSSLLHTSVMSKQYGNEVFLAK 165 (512)
T ss_pred hHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHhCCCCccchHHHHH
Confidence 999999999999999999999999999999999999999999998 5566666 899999999886 789999
Q ss_pred HHHHHHHhhccC-CcEE-------eeCCCcccceeEEEeeeEEeecccCCccccCcccCcccccCeeEEEeccc------
Q 007643 222 MIAEAMSKVGRK-GVVT-------LEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKK------ 287 (595)
Q Consensus 222 li~~Av~~v~~~-g~I~-------v~~G~~~~ds~~li~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~------ 287 (595)
|+++|+.+++++ +.|. +..|+++.|+ ++++||+|+++|.+ |+..++||+|++++++
T Consensus 166 livdAv~~V~~~~~~i~v~~I~i~k~~Ggs~~ds-~lv~G~~~dk~~~~---------~~~~~~n~kI~ll~~~le~~~~ 235 (512)
T 3iyg_Q 166 LIAQACVSIFPDSGHFNVDNIRVCKILGSGVHSS-SVLHGMVFKKETEG---------DVTSVKDAKIAVYSCPFDGMIT 235 (512)
T ss_pred HHHHHHHHHhccCCcccHhHeeEeeccCCCcccc-eEEeeEEEecCcCC---------CCcccccCceEEEecccccccc
Confidence 999999999876 4333 3469999888 99999999999865 4456789999998875
Q ss_pred -------CCCHHHHHHH-------HH----HHHHcCCCEEEEeccccHHHHHHHHHHhhcccceeEEeeCCCcccchhhh
Q 007643 288 -------ITNARDLINV-------LE----DAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQY 349 (595)
Q Consensus 288 -------i~~~~~i~~~-------le----~i~~~g~~lvIi~~~i~~~aL~~L~~n~~~g~~~i~av~~~~~~~~~~~~ 349 (595)
|++++++.++ ++ ++.+.|+||||++++|++.++++|..+ +|+||++|+ +.+
T Consensus 236 e~k~~v~Is~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~la~~~l~k~------~I~av~~~~-----~~d 304 (512)
T 3iyg_Q 236 ETKGTVLIKSAEELMNFSKGEENLMDAQVKAIADTGANVVVTGGRVADMALHYANKY------NIMLVRLNS-----KWD 304 (512)
T ss_pred cccceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHC------CeEEEEeCC-----HHH
Confidence 5677887765 44 888999999999999999998877643 789999776 456
Q ss_pred HHHHHHHhCCeEeecCCCccccCCCCCCceeeeEEEE---ecCeEEEEccCCC-chhhhhHHHHHHHHHHhhchHHHHHH
Q 007643 350 LDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL---TKDTTTIVGDGST-QDAVSKRVAQIRTLIENAEQDYEREK 425 (595)
Q Consensus 350 L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i---~~~~~~ii~~~~~-~~~i~~r~~~lr~~l~~~~~~~~~e~ 425 (595)
|+|||++|||++++ +++++++++||+|++|++ ++++++++.+|.. ....+ ..|| +++....+|
T Consensus 305 le~ia~~tGa~iis-----~l~~~~~~~LG~a~~v~~~~~g~~~~~~~~~~~~~~~~~t---I~lr----G~te~~l~E- 371 (512)
T 3iyg_Q 305 LRRLCKTVGATALP-----RLNPPVLEEMGHCDSVYLSEVGDTQVVVFKHEKEDGAIST---IVLR----GSTDNLMDD- 371 (512)
T ss_pred HHHHHHHhCCEEec-----ccccCCHHHCCcccEEEEEEeCCeEEEEEEcccCCCceEE---EEEC----CCcHHHHHH-
Confidence 99999999999999 689999999999999975 5678999998853 22221 1243 333333222
Q ss_pred HHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHcC-ccccchHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhHHHHHH
Q 007643 426 LNERIAKLSGGVAVIQLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLI 504 (595)
Q Consensus 426 L~ERi~~l~gg~a~i~~~i~Dal~~~k~al~~g-vVpGGGa~e~~ls~~L~~~~~~~~~~~q~~~i~~~a~AL~~ip~~L 504 (595)
++|+++|||+++|+++++| +|||||++|++++.+|++++.+.++.+| +++++|++||+.||++|
T Consensus 372 --------------~kr~i~DAl~~~r~a~~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq-~~i~~~a~ALe~ip~~L 436 (512)
T 3iyg_Q 372 --------------IERAVDDGVNTFKVLTRDKRLVPGGGATEIELAKQITSYGETCPGLEQ-YAIKKFAEAFEAIPRAL 436 (512)
T ss_pred --------------HHHHHHHHHHHHHHHHhCCCEecCCcHHHHHHHHHHHHHhccCCcHHH-HHHHHHHHHHHHHHHHH
Confidence 2289999999999999999 9999999999999999999887777665 89999999999999999
Q ss_pred HHhcCCchHHHHHHhhhc---CCCceeeecCCC--ccccccccCcccchHHHHHHHHHHHHHHHHHhchhHHhhc
Q 007643 505 AKNAGVNGSVVSEKVLSS---DNHKYGYNAATG--NYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVE 574 (595)
Q Consensus 505 ~~NaG~d~~~vi~kl~~~---~~~~~Gid~~~g--~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~~ 574 (595)
|+|||+|+.+++.+|++. +++++|||+.+| ++.||++.|||||+.||+++|++|+|+|++|||||++|+.
T Consensus 437 a~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~id~ii~~ 511 (512)
T 3iyg_Q 437 AENSGVKANEVISKLYAVHQEGNKNVGLDIEAEVPAVKDMLEAGVLDTYLGKYWAIKLATNAAVTVLRVDQIIMA 511 (512)
T ss_pred HHhcCCCHHHHHHHHHHHHhcCCCcEEEecCCCCCcccchHhccCeEcHHHHHHHHHHHHHHHHHHHhHhHheec
Confidence 999999999999999874 357899999965 9999999999999999999999999999999999999975
No 24
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=100.00 E-value=9.2e-92 Score=784.45 Aligned_cols=459 Identities=21% Similarity=0.288 Sum_probs=393.3
Q ss_pred HHHHHHHHHHHHHHHHhhhhccCcCCCceeeecCCCCcEEecChHHHhccccccCccchHHHHHHHHHHHhcccccCCCc
Q 007643 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (595)
Q Consensus 72 ~~~~~~~~~~v~~la~~v~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~l~l~hP~enigakLl~~~a~~qd~~~GDGT 151 (595)
+++|..|+.||..|+++|+|||||+||||||+++.|+|+|||||+||||+|+++||+ |||++++|++||+++||||
T Consensus 25 ~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hP~----Akll~e~a~~qd~e~GDGT 100 (568)
T 3p9d_H 25 DGQIIKSIAAIRELHQMCLTSMGPCGRNKIIVNHLGKIIITNDAATMLRELDIVHPA----VKVLVMATEQQKIDMGDGT 100 (568)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSSSSSCEEEEECTTSCEEEESCHHHHTTTCCCCCHH----HHHHHHHHHHHHTTSSSCH
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCCHH----HHHHHHHHHhhhceeCCCc
Confidence 679999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHcccccC----Cch-HHHHHHhhhcC-----ChhHHHH
Q 007643 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEV----EDS-ELADVAAVSAG-----NNYEVGN 221 (595)
Q Consensus 152 Tt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v----~~~-~L~~va~ts~~-----~~~~ls~ 221 (595)
||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++++ ++. +|.++|+||++ ++++|++
T Consensus 101 TtvvvLa~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~e~L~~~a~~v~~~~~~~~~l~~va~tsl~sK~~~~~~~i~~ 180 (568)
T 3p9d_H 101 NLVMILAGELLNVSEKLISMGLSAVEIIQGYNMARKFTLKELDEMVVGEITDKNDKNELLKMIKPVISSKKYGSEDILSE 180 (568)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCCSCCCCCCTTHHHHHHHHHHHTTTSTTCHHHHHH
T ss_pred eehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCHHHHHHHHHHHhhccCcchHHHHHH
Confidence 9999999999999999999999999999999999999999999999876 344 89999999874 3689999
Q ss_pred HHHHHHHhhccC-----C-------cEEe--eCCCcccceeEEEeeeEEeecccCCccccCcccCccccc---CeeEEEe
Q 007643 222 MIAEAMSKVGRK-----G-------VVTL--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYE---NCKLLLV 284 (595)
Q Consensus 222 li~~Av~~v~~~-----g-------~I~v--~~G~~~~ds~~li~G~~~~~g~~~p~~~~~~~~~~~~~~---n~~Ill~ 284 (595)
|+++|+.+++++ + .|++ .+|++++|| ++++|++|+++|. +|+++++ ||||+++
T Consensus 181 livdAv~~V~~~~~~~~~~~~~dl~~I~I~k~~Ggs~~dS-~lv~G~v~dk~~~---------~m~~~i~~~~n~kIlll 250 (568)
T 3p9d_H 181 LVSEAVSHVLPVAQQAGEIPYFNVDSIRVVKIMGGSLSNS-TVIKGMVFNREPE---------GHVKSLSEDKKHKVAVF 250 (568)
T ss_dssp HHHHHHTTSCC---------CCCGGGCEEEEEESSCGGGC-EEESSCCBSSCBS---------SGGGSCCCCSSCEEEEE
T ss_pred HHHHHHHHHhhccccccCCcccccceEEEEEccCCCcchh-eeeccEEEeeccc---------CCcEEEecCCcceEEEE
Confidence 999999999874 3 3555 469999999 9999999999973 3778888 9999999
Q ss_pred ccc-------------CCCHHHHHH-----------HHHHHHHcCCCEEEEeccccHHHHHHHHHHhhcccceeEEeeCC
Q 007643 285 DKK-------------ITNARDLIN-----------VLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAP 340 (595)
Q Consensus 285 d~~-------------i~~~~~i~~-----------~le~i~~~g~~lvIi~~~i~~~aL~~L~~n~~~g~~~i~av~~~ 340 (595)
|++ |++++++.+ +++++.+.|+||||++++|+++++++|..+ +|+||+++
T Consensus 251 ~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~~al~~L~~~------gI~av~~v 324 (568)
T 3p9d_H 251 TCPLDIANTETKGTVLLHNAQEMLDFSKGEEKQIDAMMKEIADMGVECIVAGAGVGELALHYLNRY------GILVLKVP 324 (568)
T ss_dssp CSCSSSCCCSSSCEEECCSHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECSCCCHHHHHHHHHH------TCEEECCC
T ss_pred ccCccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEECCCcChHHHHHHHHC------CeEEEecC
Confidence 987 778887755 688999999999999999999999999886 57999866
Q ss_pred CcccchhhhHHHHHHHhCCeEeecCCCccccCCCCCCceeeeEEE---EecCeEEEEccCC--CchhhhhHHHHHHHHHH
Q 007643 341 GFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVV---LTKDTTTIVGDGS--TQDAVSKRVAQIRTLIE 415 (595)
Q Consensus 341 ~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~---i~~~~~~ii~~~~--~~~~i~~r~~~lr~~l~ 415 (595)
. +.+|+|||++|||++++ +++++++++||+|+.|+ +++++++|+.+|+ +....+. .| .
T Consensus 325 ~-----~~~leria~~tGa~ivs-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~l~~~~~TI---ll----r 387 (568)
T 3p9d_H 325 S-----KFELRRLCRVCGATPLP-----RLGAPTPEELGLVETVKTMEIGGDRVTVFKQEQGEISRTSTI---IL----R 387 (568)
T ss_dssp C-----HHHHHHHHHHHSCCCCS-----SSSCCCGGGCEECSCCCCCEETTEECBCCCCCSSSCCSSCEE---EE----E
T ss_pred C-----HHHHHHHHHHhCCEEEe-----ccccCCHHHCCcceEEEEEEecCceEEEEecCCCCCCCeEEE---EE----C
Confidence 5 77899999999999999 58999999999999986 4568999999986 3443321 23 3
Q ss_pred hhchHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHH--cC-ccccchHHHHHHHHHHHHHhhcCCchhHHHHHHH
Q 007643 416 NAEQDYEREKLNERIAKLSGGVAVIQLRVEDALNATKAAVE--EG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADI 492 (595)
Q Consensus 416 ~~~~~~~~e~L~ERi~~l~gg~a~i~~~i~Dal~~~k~al~--~g-vVpGGGa~e~~ls~~L~~~~~~~~~~~q~~~i~~ 492 (595)
+++....+| ++|+++|||+++|++++ ++ +|||||++|++++.+|++++.+.++.+| +++++
T Consensus 388 G~t~~~l~E---------------~er~i~DAL~vvr~av~~~d~~iVpGGGa~E~~ls~~L~~~a~~~~g~eq-~~i~~ 451 (568)
T 3p9d_H 388 GATQNNLDD---------------IERAIDDGVAAVKGLMKPSGGKLLPGAGATEIELISRITKYGERTPGLLQ-LAIKQ 451 (568)
T ss_dssp ESCHHHHHH---------------HHHHHHHHHHHHHHTTSTTCCCCCCTTTHHHHHHHHHHHHHHHTCCSTHH-HHHHH
T ss_pred CCcHHHHHH---------------HHHHHHHHHHHHHHHhcccCCeEEeCCcHHHHHHHHHHHHHhccCCcHHH-HHHHH
Confidence 444333232 22899999999999999 65 9999999999999999999988877766 89999
Q ss_pred HHHHHhHHHHHHHHhcCCchHHHHHHhhhcC-----------CCceeeecCCCc---cccccccCcccchHHHHHHHHHH
Q 007643 493 VKRALCYPLKLIAKNAGVNGSVVSEKVLSSD-----------NHKYGYNAATGN---YEDLMAAGIIDPTKVVRCCLEHA 558 (595)
Q Consensus 493 ~a~AL~~ip~~L~~NaG~d~~~vi~kl~~~~-----------~~~~Gid~~~g~---i~d~~~~gI~Dp~~vk~~al~~A 558 (595)
|++||+.||++||+|||+|+.+++.+|++.| ++++|||+.+|+ +.||++.|||||+.||+++|++|
T Consensus 452 fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~~~~G~d~~~g~~~~~~d~~~~gI~dp~~vk~~al~~A 531 (568)
T 3p9d_H 452 FAVAFEVVPRTLAETAGLDVNEVLPNLYAAHNVTEPGAVKTDHLYKGVDIDGESDEGVKDIREENIYDMLATKKFAINVA 531 (568)
T ss_dssp HHHGGGHHHHHHHHHHTCCHHHHHHHHHHCCCCSSCCCCCCTTSSSCCCHHHHTCCCCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhhhcccccccCCCceeEcccCCCcccccChHHccCEEcHHHHHHHHHHH
Confidence 9999999999999999999999999998753 357999999997 99999999999999999999999
Q ss_pred HHHHHHHhchhHHhhccCCCCCCCC
Q 007643 559 SSVAKTFLMSDCVVVEIKEPEPAMP 583 (595)
Q Consensus 559 ~e~a~~iL~iD~iI~~~~~~~~~~~ 583 (595)
+|+|++|||||++|..+|...|++|
T Consensus 532 ~e~a~~iL~iD~ii~~~~~~~~~~~ 556 (568)
T 3p9d_H 532 TEAATTVLSIDQIIMAKKAGGPRAP 556 (568)
T ss_dssp EECBCCC------------------
T ss_pred HHHHHHHHhHHHHhhccccCCCCCC
Confidence 9999999999999999988777744
No 25
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=100.00 E-value=1.2e-90 Score=773.14 Aligned_cols=460 Identities=22% Similarity=0.324 Sum_probs=398.6
Q ss_pred ccccCCcHHHHHHHHHHHHHHHHhhhhccCcCCCceeeecCCCCcEEecChHHHhccccccCccchHHHHHHHHHHHhcc
Q 007643 65 DLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTN 144 (595)
Q Consensus 65 ~~~f~~~~~~~~~~~~~v~~la~~v~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~l~l~hP~enigakLl~~~a~~qd 144 (595)
+...| .+++..|+.+|..|+++|+|||||+||||||++++|+|+|||||+||||+|+++||+ |+|++++|++||
T Consensus 11 ~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----akll~e~a~~qd 84 (546)
T 3p9d_F 11 ESLRR--DAALKVNVTSAEGLQSVLETNLGPKGTLKMLVDGAGNIKLTKDGKVLLTEMQIQSPT----AVLIARAAAAQD 84 (546)
T ss_dssp EEEEH--HHHHHHHHHHHTHHHHHHTTTSSTTCCEEEEECTTSCEEEECCHHHHHHTSCCCCHH----HHHHHHHHHHHH
T ss_pred chhhH--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHH----HHHHHHHHHHHH
Confidence 44456 889999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred cccCCCcchHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHcccccCC----ch-HHHHHHhhhcCC----
Q 007643 145 DLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE----DS-ELADVAAVSAGN---- 215 (595)
Q Consensus 145 ~~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~----~~-~L~~va~ts~~~---- 215 (595)
+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|++++++++ +. +|.++|+||+++
T Consensus 85 ~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~~~L~~vA~tsl~sKi~~ 164 (546)
T 3p9d_F 85 EITGDGTTTVVCLVGELLRQAHRFIQEGVHPRIITDGFEIARKESMKFLDEFKISKTNLSNDREFLLQVARSSLLTKVDA 164 (546)
T ss_dssp HHCSSCHHHHHHHHHHHHHHHHHHTTTTBCHHHHHHHHHHHHHHHHHHHHHHCCCCSSSSTTCHHHHHHHHHHTCSTTHH
T ss_pred HHhCCCcccHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHhhccccccccCHHHHHHHHHHHhCCCcch
Confidence 999999999999999999999999999999999999999999999999999999885 34 899999999875
Q ss_pred --hhHHHHHHHHHHHhhccC-------CcE--EeeCCCcccceeEEEeeeEEeecccCCccccCcccCcccccCeeEEEe
Q 007643 216 --NYEVGNMIAEAMSKVGRK-------GVV--TLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLV 284 (595)
Q Consensus 216 --~~~ls~li~~Av~~v~~~-------g~I--~v~~G~~~~ds~~li~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~ 284 (595)
.+.|++++++|+..+.+. ..| .+.+|++..|| ++++||+|+++|.||+ |+++++||+|+++
T Consensus 165 ~~~d~la~l~vdaV~~V~~~~~~~~dl~~I~i~ki~Gg~~~ds-~lv~G~v~dk~~~~~~-------m~~~~en~kIll~ 236 (546)
T 3p9d_F 165 DLTEVLTPIVTDAVLSVYDAQADNLDLHMVEIMQMQHLSPKDT-TFIKGLVLDHGGRHPD-------MPTRVKNAYVLIL 236 (546)
T ss_dssp HHCSSHHHHHHHHHHHTHHHHHTTCCGGGEEEECCCCSCTTTC-CCCSSCEESCCCCSSS-------SCSSBCSCCCCEE
T ss_pred hHHHHHHHHHHHhheEeecCCCCcccchheEEEEecCCCcccc-EEEeeEEEeccccccc-------CcceecCceEEEe
Confidence 478999999999998631 123 34689999999 9999999999999984 7889999999999
Q ss_pred cccC-------------CCHHHH-----------HHHHHHHHH---------cCCC-EEEEeccccHHHHHHHHHHhhcc
Q 007643 285 DKKI-------------TNARDL-----------INVLEDAIR---------GAYP-ILIIAEDIEQEALATLVVNKLRG 330 (595)
Q Consensus 285 d~~i-------------~~~~~i-----------~~~le~i~~---------~g~~-lvIi~~~i~~~aL~~L~~n~~~g 330 (595)
|+++ ++++++ ...++.+.. .|+| |||++++|+++|+++|..|
T Consensus 237 ~~~Le~~k~e~~~~~~i~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~v~~~~~g~~~vIi~~k~I~~~Al~~L~~~---- 312 (546)
T 3p9d_F 237 NVSLEYEKTEVNSGFFYSSADQRDKLAASERKFVDAKLKKIIDLKNEVCGMDPDKGFVIINQKGIDPMSLDVFAKH---- 312 (546)
T ss_dssp CCCSSSCCCSSCBCCCCCSSSCHHHHHHHHHHHHHHHHHHHHHCC-----------CEEEESSCCCHHHHHHHTTT----
T ss_pred cCcccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCceEEEecCcCcHHHHHHHHHC----
Confidence 9864 222222 234555554 3455 5666779999999999887
Q ss_pred cceeEEeeCCCcccchhhhHHHHHHHhCCeEeecCCCccccCCCCCCceeeeEE---EEecCeEEEEccCCCchhhhhHH
Q 007643 331 ALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKV---VLTKDTTTIVGDGSTQDAVSKRV 407 (595)
Q Consensus 331 ~~~i~av~~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v---~i~~~~~~ii~~~~~~~~i~~r~ 407 (595)
+|++|+ ++++.+|+|||++|||++++ +++++++++||+|+.| .+++++|+|+.+|+++..++.
T Consensus 313 --gI~~vr-----~v~~~~leria~~tGa~ii~-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~~~tI-- 378 (546)
T 3p9d_F 313 --NILALR-----RAKRRNMERLQLVTGGEAQN-----SVEDLSPQILGFSGLVYQETIGEEKFTYVTENTDPKSCTI-- 378 (546)
T ss_dssp --TCEEEC-----CCCHHHHHHHHHTTTBCCCC-----CCSSCSTTCCBCCCCBCBCCCSSCCCEECSSCSCCSCEEE--
T ss_pred --CCeeEe-----cCCHHHHHHHHHHhCCEEec-----chhhCCHhHCCcccEEEEEEecCceEEEEecCCCCceEEE--
Confidence 457776 56688999999999999999 6899999999999999 478999999999988765432
Q ss_pred HHHHHHHHhhchHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHcC-ccccchHHHHHHHHHHHH---HhhcCCc
Q 007643 408 AQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDA---IKETLDN 483 (595)
Q Consensus 408 ~~lr~~l~~~~~~~~~e~L~ERi~~l~gg~a~i~~~i~Dal~~~k~al~~g-vVpGGGa~e~~ls~~L~~---~~~~~~~ 483 (595)
.|| +++....+| . +|+++|||+++|+++++| +|||||++|++++.+|++ ++++.++
T Consensus 379 -~lr----G~te~~l~E-~--------------kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~~~~g 438 (546)
T 3p9d_F 379 -LIK----GSTHYALAQ-T--------------KDAVRDGLRAVANVLKDKNIIPGAGAFYIALSRYLRSANMNKLGAKG 438 (546)
T ss_dssp -ECC----CSCHHHHHH-H--------------HHHHHHHHHHHHHHTTSCCEEETTTHHHHHHHHHHHHHHTTTTTTTS
T ss_pred -EEC----CCCHHHHHH-H--------------HHHHHHHHHHHHHHhcCCcEEeCCCHHHHHHHHHHHhhhhhhhcCch
Confidence 233 344333222 2 289999999999999999 999999999999999999 5777767
Q ss_pred hhHHHHHHHHHHHHhHHHHHHHHhcCCchHHHHHHhhhc--------CCCceeeecCCCccccccccCcccchHHHHHHH
Q 007643 484 DEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSS--------DNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCL 555 (595)
Q Consensus 484 ~~q~~~i~~~a~AL~~ip~~L~~NaG~d~~~vi~kl~~~--------~~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~al 555 (595)
.+| +++++|++||+.||++||+|||+|+.+++.+|++. +++++|||+.+|++.||++.|||||+.||+++|
T Consensus 439 ~eq-~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al 517 (546)
T 3p9d_F 439 KTK-TGIEAFAEALLVIPKTLVKNSGFDPLDVLAMVEDELDDAQDSDETRYVGVDLNIGDSCDPTIEGIWDSYRVLRNAI 517 (546)
T ss_dssp HHH-HHHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHHTTSTTSSCCCCBTTTTBCCCSGGGTCEEEHHHHHHHH
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhhhhcccCCceeeEeCCCCeecchHhccCEecHHHHHHHH
Confidence 655 89999999999999999999999999999999864 346799999999999999999999999999999
Q ss_pred HHHHHHHHHHhchhHHhhccCC
Q 007643 556 EHASSVAKTFLMSDCVVVEIKE 577 (595)
Q Consensus 556 ~~A~e~a~~iL~iD~iI~~~~~ 577 (595)
++|+|+|++|||||+||...+.
T Consensus 518 ~~A~~~a~~iL~iD~ii~~~~~ 539 (546)
T 3p9d_F 518 TGATGIASNLLLCDELLRAGRS 539 (546)
T ss_dssp HHHHHHHHHHHTEEEEEEECCS
T ss_pred HHHHHHHHHHHHHHHHHcCCcc
Confidence 9999999999999999987543
No 26
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=100.00 E-value=7.7e-88 Score=743.42 Aligned_cols=440 Identities=22% Similarity=0.346 Sum_probs=330.5
Q ss_pred eeecCCCCcEEecChHHHhccccccCccchHHHHHHHHHHHhcccccCCCcchHHHHHHHHHHHHHHHHhcCCChHHHHH
Q 007643 101 VLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITR 180 (595)
Q Consensus 101 mI~~~~g~~~ITnDG~TIlk~l~l~hP~enigakLl~~~a~~qd~~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~ 180 (595)
||++++|+|+|||||+||||+|+++||+ |||++++|++||+++||||||+||||++||+++.+++++|+||+.|++
T Consensus 1 mlv~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~qd~e~GDGTTtvvvLa~~LL~~a~~ll~~GihP~~I~~ 76 (500)
T 3aq1_B 1 MLVDSMGDIVITNDGATILKEMDIQHPA----AKMIVEVSKTQDAEVGDGTTTAAVLSGELLSKAEELIMKGVHSTIISE 76 (500)
T ss_dssp ----------------------------------------------CCHHHHHHHHHHHHHHHHHHHHHTTTCCHHHHHH
T ss_pred CccCCCCCeEEECcHHHHHHhCcCCCHH----HHHHHHHHHhhhhhhCCChHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 6888999999999999999999999998 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHcccccCCc--h-HHHHHHhhhcC------ChhHHHHHHHHHHHhhccC--Cc--------EEee--
Q 007643 181 GIEKTSKALVSELKQMSKEVED--S-ELADVAAVSAG------NNYEVGNMIAEAMSKVGRK--GV--------VTLE-- 239 (595)
Q Consensus 181 g~~~a~~~~~~~L~~~s~~v~~--~-~L~~va~ts~~------~~~~ls~li~~Av~~v~~~--g~--------I~v~-- 239 (595)
||++|++.++++|++++++++. . +|.++|+||++ ++++|++|+++|+.+++++ |. |+++
T Consensus 77 G~~~A~~~a~~~L~~~s~~v~~~d~~~l~~va~tsl~sKi~~~~~~~i~~li~dAv~~v~~~~~g~~~~di~~~I~V~k~ 156 (500)
T 3aq1_B 77 GYRHAAEKCREILETITIAISPDDEAALIKIAGTAITGKGAEAYKEKLSALTVKAVRSIVEEEEDGLKVNVLENIKIEKR 156 (500)
T ss_dssp HHHHHHHHHHHHHHHHCEECCTTCHHHHHHHHHTTCCSSSTTSSHHHHHHHHHHHHTTSEECCSSSCEECHHHHEEEEEE
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHhhcccccccHHHHHHHHHHHHHHhcccccCCccccccccEEEEEe
Confidence 9999999999999999999864 4 89999998853 5799999999999999876 43 4554
Q ss_pred CCCcccceeEEEeeeEEeecccCCccccCcccCcccccCeeEEEeccc-------------CCCHHHH-----------H
Q 007643 240 EGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKK-------------ITNARDL-----------I 295 (595)
Q Consensus 240 ~G~~~~ds~~li~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~-------------i~~~~~i-----------~ 295 (595)
+|++++|+ ++++||+|+++|.|||| +++++||+|+++|++ |++++++ .
T Consensus 157 ~G~~~~ds-~lv~G~v~dk~~~~~~m-------~~~i~n~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~ 228 (500)
T 3aq1_B 157 AGGSIDDS-ELIDGLVIDKERSHPNM-------PEKVENAKILLLSCPVEFRKTEVDSEIKITSPGQMQLFLDQEEKMMR 228 (500)
T ss_dssp ESSCGGGC-EEESEEEESCCCSSTTS-------CSEEEEEEEEEESSCBCC-------------------------CHHH
T ss_pred cCCCccce-EEEeeeEEeecCCCCCC-------cccccCCEEEEEeCCccccccccceeEeeCCHHHHHHHHHHHHHHHH
Confidence 89999998 99999999999999984 668999999999998 7777775 7
Q ss_pred HHHHHHHHcCCCEEEEeccccHHHHHHHHHHhhcccceeEEeeCCCcccchhhhHHHHHHHhCCeEeecCCCccccCCCC
Q 007643 296 NVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGK 375 (595)
Q Consensus 296 ~~le~i~~~g~~lvIi~~~i~~~aL~~L~~n~~~g~~~i~av~~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~ 375 (595)
++++++.+.|+||||++++|+++|+++|..+ +|+||+ ++++++|+|||++|||++++ +++++++
T Consensus 229 ~~le~I~~~g~~lvi~~~~I~~~al~~L~~~------~I~av~-----~~~k~~le~ia~~tGa~iis-----~l~~~~~ 292 (500)
T 3aq1_B 229 EMAEKVIASGANVVFCQKGIDDMAQYYIEKA------GIYAVR-----RVKKSDLKRLSKVTGATIIQ-----DLDQITT 292 (500)
T ss_dssp HHHHHHHTTCCSEEEESSCBCHHHHHHHHHT------TCEEEC-----SCCHHHHHHHHHHHCCCCBS-----CTTCCCS
T ss_pred HHHHHHHHhCcCEEEECCCcCHHHHHHHHHC------CEEEEE-----eCCHHHHHHHHHHhCCeEec-----ccccCCH
Confidence 8999999999999999999999999999987 467775 78899999999999999998 6899999
Q ss_pred CCceeeeEEEEe---cCeEEEEccCCCchhhhhHHHHHHHHHHhhchHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHH
Q 007643 376 EVLGNASKVVLT---KDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQLRVEDALNATK 452 (595)
Q Consensus 376 ~~lG~~~~v~i~---~~~~~ii~~~~~~~~i~~r~~~lr~~l~~~~~~~~~e~L~ERi~~l~gg~a~i~~~i~Dal~~~k 452 (595)
++||+|+.|++. +++|+|+.+|++....+. .| .+++....+ | ++|+++||++++|
T Consensus 293 ~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI---~l----rG~t~~~l~----E-----------~er~l~Dal~~~r 350 (500)
T 3aq1_B 293 EDVGTAGLVEEKEVRGGKMTYVTGCQNSKAVTV---LL----HGGTEHVVD----S-----------LDHALNDALHVVG 350 (500)
T ss_dssp TTCEEEEEEEEEECSSSEEEEEEEETTCCCEEE---EE----EESSHHHHH----H-----------HHHHHHHHHHHHH
T ss_pred hHCCCceEEEEEEecCeEEEEEECCCCCceEEE---Ee----cCCcHHHHH----H-----------HHHHHHHHHHHHH
Confidence 999999999864 899999999887655432 23 334433322 2 2289999999999
Q ss_pred HHHHcC-ccccchHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhHHHHHHHHhcCCchHHHHHHhhhc---CCCcee
Q 007643 453 AAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSS---DNHKYG 528 (595)
Q Consensus 453 ~al~~g-vVpGGGa~e~~ls~~L~~~~~~~~~~~q~~~i~~~a~AL~~ip~~L~~NaG~d~~~vi~kl~~~---~~~~~G 528 (595)
+++++| +|||||++|++++.+|++++.+.++.+| +++++|++||+.||++||+|||+|+.+++.+|++. ++.++|
T Consensus 351 ~~~~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q-~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G 429 (500)
T 3aq1_B 351 VVIEDGKVVVGGGSSEVELSLRLSEYASTLKGREQ-LAVSKFAEALEVIPVALAENAGLDPIDIMVELRSQHEKGNKNAG 429 (500)
T ss_dssp HHHHHSEEEETTTHHHHHHHHHHHHHHHTCCSHHH-HHHHHHHHHTTHHHHHHHHHTTCCHHHHHHHHHHHHHTTCTTEE
T ss_pred HHHHCCCCCCCCcHHHHHHHHHHHHHhhhcCchHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhcCCCCCee
Confidence 999999 9999999999999999999987777655 89999999999999999999999999999999864 345899
Q ss_pred eecCCCccccccccCcccchHHHHHHHHHHHHHHHHHhchhHHhhccCCCCCCCCCCCCCCCCC
Q 007643 529 YNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 592 (595)
Q Consensus 529 id~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~~~~~~~~~~~~~~~~~ 592 (595)
||+.+|++.||++.|||||+.||+++|++|+|+|++|||||++|...|+++|+ |+.++|++||
T Consensus 430 ~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~~~~~~-~~~g~~~~~~ 492 (500)
T 3aq1_B 430 LNVYTGEVVDMWENDVIEPLRIKTQAINAAMEATVMILRIDDVVASKGSANQG-MGPGGLPDMP 492 (500)
T ss_dssp ECTTTCCEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHCC------------------------
T ss_pred EeCCCCCccchHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCCC-CCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999998877666 4323444444
No 27
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.7e-47 Score=358.94 Aligned_cols=193 Identities=48% Similarity=0.801 Sum_probs=189.7
Q ss_pred eEEEeeeEEeecccCCccccCcccCcccccCeeEEEecccCCCHHHHHHHHHHHHHcCCCEEEEeccccHHHHHHHHHHh
Q 007643 248 LYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNK 327 (595)
Q Consensus 248 ~~li~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~~~~~i~~~le~i~~~g~~lvIi~~~i~~~aL~~L~~n~ 327 (595)
+++++||.||+||+||||+|++++|..+++||+||++|++|+++++++|+||.+.+.++||+|++++++++||++|+.|+
T Consensus 2 levvEGmqfDrGYiSpyfvtd~~~m~~~le~p~ILitdkKIs~i~~ilP~LE~~~~~~kpLlIIAedvegeaLatLvvNk 81 (194)
T 3m6c_A 2 LEFTEGIGFDKGFLSAYFVTDFDNQQAVLEDALILLHQDKISSLPDLLPLLEKVAGTGKPLLIVAEDVEGEALATLVVNA 81 (194)
T ss_dssp CCCCSSEEESCCBSCGGGCSBTTTTBEEEEEEEEEEBSSEECCHHHHHHHHHHHHHHTCCEEEEESEECHHHHHHHHHHH
T ss_pred eEEEeeeEccCcccCceeeeccCCcEEEEecceEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEecccccchhhhhhhhh
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccceeEEeeCCCcccchhhhHHHHHHHhCCeEeecCCCccccCCCCCCceeeeEEEEecCeEEEEccCCCchhhhhHH
Q 007643 328 LRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRV 407 (595)
Q Consensus 328 ~~g~~~i~av~~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i~~~~~~ii~~~~~~~~i~~r~ 407 (595)
++|.++++|||+|+||+.|+..|+|||++|||++++++.|+++++++.++||+|++|.+++++++|+.+.+++..++.||
T Consensus 82 lrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~vtkd~T~iv~G~g~~~~I~~Rv 161 (194)
T 3m6c_A 82 IRKTLKAVAVKGPYFGDRRKAFLEDLAVVTGGQVVNPDAGMVLREVGLEVLGSARRVVVSKDDTVIVDGGGTAEAVANRA 161 (194)
T ss_dssp HHTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHH
T ss_pred ccceEEEEEEECCCCchhhhhhhHhHHHhcCCeEEeccCCcccccCCHHHCCCccEEEEcCCceEEecCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhchHHHHHHHHHHHHHhcCcHHHH
Q 007643 408 AQIRTLIENAEQDYEREKLNERIAKLSGGVAVI 440 (595)
Q Consensus 408 ~~lr~~l~~~~~~~~~e~L~ERi~~l~gg~a~i 440 (595)
.+||.+++.++++|++|+|+||||+|+||+|+|
T Consensus 162 ~qIr~~ie~t~s~ydkEKLqERlAkLsGGVAVI 194 (194)
T 3m6c_A 162 KHLRAEIDKSDSDWDREKLGERLAKLAGGVAVI 194 (194)
T ss_dssp HHHHHHHHTCCCHHHHHHHHHHHHHHHHHBCCC
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHcCCcEEC
Confidence 999999999999999999999999999999975
No 28
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} SCOP: c.8.5.1 PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A
Probab=100.00 E-value=9.4e-46 Score=350.00 Aligned_cols=189 Identities=57% Similarity=0.892 Sum_probs=185.8
Q ss_pred EeeeEEeecccCCccccCcccCcccccCeeEEEecccCCCHHHHHHHHHHHHHcCCCEEEEeccccHHHHHHHHHHhhcc
Q 007643 251 VEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRG 330 (595)
Q Consensus 251 i~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~~~~~i~~~le~i~~~g~~lvIi~~~i~~~aL~~L~~n~~~g 330 (595)
.+||.||+||+||||+|++++|..+++||+||++|++|+++++++|+||.+.+.++||+|++++|+++||++|+.|+++|
T Consensus 12 ~~~~qfDrGYiSPYfvtd~e~m~~~le~p~ILitdkKIs~i~~ilP~LE~v~~~~rpLlIIAEDvegEALatLvvNklrg 91 (201)
T 3osx_A 12 SEGMQFDRGYLSPYFINKPESGSVELENPYILLVDKKISNIRELLPVLEGVAKASKPLVIIAEDVEGEALATLVVNNMRG 91 (201)
T ss_dssp CCCEEESCCBSCGGGCSBTTTTBEEEESCEEEEEEEEECCHHHHHHHHHHHHTSSCCEEEEEEEECHHHHHHHHHHHHHT
T ss_pred ccccEecCccCChheeecccCCEEEecCCeEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEeccccchhhhHHHHhhccc
Confidence 46999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeEEeeCCCcccchhhhHHHHHHHhCCeEeecCCCccccCCCCCCceeeeEEEEecCeEEEEccCCCchhhhhHHHHH
Q 007643 331 ALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQI 410 (595)
Q Consensus 331 ~~~i~av~~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i~~~~~~ii~~~~~~~~i~~r~~~l 410 (595)
.++++|||+|+||+.|+..|+|||++|||++++++.|+++++++.++||+|++|.+++++++|+.+.+++..++.||.+|
T Consensus 92 ~l~v~AVKAPgFGdrRk~~L~DIAilTGg~visee~g~~Le~~~~~~LG~a~~V~vtkd~TtIv~G~G~~~~I~~Rv~qI 171 (201)
T 3osx_A 92 IVKVASVKAPGFGDRRKAMLQDIATLTNGTVISEEIGLELEKATLEDLGQAKRVVINKDTTTIIDGVGEEGAIAARVTQI 171 (201)
T ss_dssp SCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHHHHH
T ss_pred eEEEEEEeCCCCccchhhhhHhHHHHhCCEEEecccCCccccCCHhhCCCccEEEEcCCceEEecCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhchHHHHHHHHHHHHHhcCcHHH
Q 007643 411 RTLIENAEQDYEREKLNERIAKLSGGVAV 439 (595)
Q Consensus 411 r~~l~~~~~~~~~e~L~ERi~~l~gg~a~ 439 (595)
|.+++.++++|++|+|+||||+|+||+||
T Consensus 172 r~qie~t~S~ydkEKLqERLAKLsGGVAV 200 (201)
T 3osx_A 172 RQQIEESTSDYDREKLQERVAKLAGGVKL 200 (201)
T ss_dssp HHHHHTCCCHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHcCCCcC
Confidence 99999999999999999999999999985
No 29
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1
Probab=100.00 E-value=6.8e-35 Score=263.42 Aligned_cols=144 Identities=56% Similarity=0.922 Sum_probs=142.0
Q ss_pred eeEEeecccCCccccCcccCcccccCeeEEEecccCCCHHHHHHHHHHHHHcCCCEEEEeccccHHHHHHHHHHhhcccc
Q 007643 253 GMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGAL 332 (595)
Q Consensus 253 G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~~~~~i~~~le~i~~~g~~lvIi~~~i~~~aL~~L~~n~~~g~~ 332 (595)
||.||+||+||||++++++|..+++||+||++|++|++.++++|+||++.+.|+||+|++++++++||++|+.|+++|.+
T Consensus 1 GmqfDrGYlSpYfvtd~e~m~~~le~p~ILitdkKIs~i~~llP~LE~v~~~~~pLlIIAedvegeaLatLvvNklrg~l 80 (145)
T 1srv_A 1 GYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVSNVRELLPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTL 80 (145)
T ss_dssp CEEESCCBSCGGGCSBTTTTBEEEEEEEEEEESSEECCHHHHHHHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHTTSC
T ss_pred CccccCCccCceeecCccccEEEeeccEEEEecccccCHHHHHHHHHHHHHHCCCEEEEecccchhhhhhhhhhhhcccc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEeeCCCcccchhhhHHHHHHHhCCeEeecCCCccccCCCCCCceeeeEEEEecCeEEEEcc
Q 007643 333 KIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGD 396 (595)
Q Consensus 333 ~i~av~~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i~~~~~~ii~~ 396 (595)
+++|||+|+||+.|+..|+|||++|||++++++.|+++++.+.++||+|++|.+++++++|+.+
T Consensus 81 ~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~vtkd~TtIv~G 144 (145)
T 1srv_A 81 SVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVRITKDETTIVGG 144 (145)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTCCEECTTTTCCGGGCCGGGCEEEEEEEECSSCEEEEEE
T ss_pred eEEEEeCCCcchhhHHHHHHHHHHhCCEEEccccCCccccCCHhHCCccCEEEEcCCCeEEeCC
Confidence 9999999999999999999999999999999999999999999999999999999999999876
No 30
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=99.78 E-value=7.4e-19 Score=168.14 Aligned_cols=136 Identities=19% Similarity=0.314 Sum_probs=114.0
Q ss_pred ccceeEEEeeeEEeecccCCccccCcccCcccccCeeEEEecccC-------------CCHHH-----------HHHHHH
Q 007643 244 AENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKI-------------TNARD-----------LINVLE 299 (595)
Q Consensus 244 ~~ds~~li~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~i-------------~~~~~-----------i~~~le 299 (595)
++|| ++++|++|++++.+| +||+.++||||+++++++ +++++ +..+++
T Consensus 1 ~~dS-~lv~Gvvl~k~~~~~-------~mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~ 72 (178)
T 1gml_A 1 MEDS-CVLRGVMINKDVTHP-------RMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCE 72 (178)
T ss_dssp --CC-SEEEEEEESCCCSST-------TSCCEEESCCEEEESSCBSCC--------------CHHHHHHHHHHHHHHHHH
T ss_pred CCCc-EEEEEEEEeccccCC-------CCCcccccceEEEEecccCCccccCccEEEECCHHHHHHHHHHHHHHHHHHHH
Confidence 3678 899999999998876 478889999999999863 33332 345688
Q ss_pred HHHHcCCCEEEEeccccHHHHHHHHHHhhcccceeEEeeCCCcccchhhhHHHHHHHhCCeEeecCCCccccCCCCCCce
Q 007643 300 DAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLG 379 (595)
Q Consensus 300 ~i~~~g~~lvIi~~~i~~~aL~~L~~n~~~g~~~i~av~~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG 379 (595)
++.+.|++|||++++|+|.|+++|..+ +|+||+ ++++++|++||++|||++++ ++++++++.||
T Consensus 73 kI~~~g~nVVl~~k~I~d~a~~~l~k~------gI~~vr-----~v~~~dleria~atGa~iv~-----~~~~l~~~~LG 136 (178)
T 1gml_A 73 DIIQLKPDVVITEKGISDLAQHYLMRA------NVTAIR-----RVRKTDNNRIARACGARIVS-----RPEELREDDVG 136 (178)
T ss_dssp HHHTTCCSEEEESSCBCHHHHHHHHHT------TCEEEC-----CCCHHHHHHHHHHHCCCEES-----CGGGCCGGGSB
T ss_pred HHhhcCCcEEEECCcccHHHHHHHHHC------CCEEEe-----cCCHHHHHHHHHHhCCeEeC-----ChhhCChhhhC
Confidence 999999999999999999999999887 567776 77899999999999999999 69999999999
Q ss_pred e-eeEEE---EecCeEEEEccCCCchhh
Q 007643 380 N-ASKVV---LTKDTTTIVGDGSTQDAV 403 (595)
Q Consensus 380 ~-~~~v~---i~~~~~~ii~~~~~~~~i 403 (595)
+ |+.|+ ++++++++|.+|+++...
T Consensus 137 ~~~~~v~~~~ig~~~~~~~~gc~~~~~~ 164 (178)
T 1gml_A 137 TGAGLLEIKKIGDEYFTFITDCKDPKAC 164 (178)
T ss_dssp CCEEEEEEEEETTEEEEEEEEESSTTSC
T ss_pred CcccEEEEEEECCeEEEEEECCCCCCEE
Confidence 9 99987 578999999998876654
No 31
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=99.75 E-value=4.7e-18 Score=159.53 Aligned_cols=127 Identities=22% Similarity=0.362 Sum_probs=108.9
Q ss_pred EeeeEEeecccCCccccCcccCcccccCeeEEEecccC-------------CCHHH-----------HHHHHHHHHHcCC
Q 007643 251 VEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKI-------------TNARD-----------LINVLEDAIRGAY 306 (595)
Q Consensus 251 i~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~i-------------~~~~~-----------i~~~le~i~~~g~ 306 (595)
++|++|++++.+| +||+.++||||+++++++ +++++ +..+++++.+.|+
T Consensus 1 i~Gvv~~k~~~~~-------~mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~ 73 (159)
T 1ass_A 1 MSGIVIDKEKVHS-------KMPDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGA 73 (159)
T ss_dssp CCCEEESCCCSCT-------TSCSEEEEEEEEEESSCBSCCHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CceEEEecccCCC-------CCCcCcCCccEEEEecCcCCcccccceeEEECCHHHHHHHHHHHHHHHHHHhhhhhhCCC
Confidence 5799999999886 478889999999999864 34433 3456889999999
Q ss_pred CEEEEeccccHHHHHHHHHHhhcccceeEEeeCCCcccchhhhHHHHHHHhCCeEeecCCCccccCCCCCCceeeeEEE-
Q 007643 307 PILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVV- 385 (595)
Q Consensus 307 ~lvIi~~~i~~~aL~~L~~n~~~g~~~i~av~~~~~~~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~- 385 (595)
+|||++++|++.|+++|..+ +|+||+ ++++++|+|||++|||++++ ++++++++.||+|+.|+
T Consensus 74 nVVl~~k~I~d~a~~~l~k~------gI~~v~-----~v~~~dleria~atGa~iv~-----~~~~l~~~~LG~~~~v~e 137 (159)
T 1ass_A 74 NVVLCQKGIDDVAQHYLAKE------GIYAVR-----RVKKSDMEKLAKATGAKIVT-----DLDDLTPSVLGEAETVEE 137 (159)
T ss_dssp SEEEESSCBCHHHHHHHHHT------TCEEEC-----SCCHHHHHHHHHHHTCCCBS-----STTSCCTTSCEEEEEEEE
T ss_pred eEEEECCccCHHHHHHHHHC------CCEEEc-----cCCHHHHHHHHHHhCCeeeC-----ccccCCcccCccceEEEE
Confidence 99999999999999999886 567776 77899999999999999999 69999999999999997
Q ss_pred --EecCeEEEEccCCCc
Q 007643 386 --LTKDTTTIVGDGSTQ 400 (595)
Q Consensus 386 --i~~~~~~ii~~~~~~ 400 (595)
++++++++|.+|.+.
T Consensus 138 ~~ig~~~~~~~~g~~~~ 154 (159)
T 1ass_A 138 RKIGDDRMTFVMGCKNH 154 (159)
T ss_dssp EEETTEEEEEEESCC--
T ss_pred EEECCeEEEEEECCCCc
Confidence 578999999999764
Done!