Query 007644
Match_columns 595
No_of_seqs 264 out of 943
Neff 5.2
Searched_HMMs 29240
Date Mon Mar 25 06:56:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007644.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007644hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i3n_A Kelch-like protein 11; 99.9 2.1E-26 7.3E-31 232.5 8.6 229 18-318 23-263 (279)
2 3hve_A Gigaxonin; ubiquitin, c 99.9 1.5E-26 5.1E-31 230.6 4.3 230 17-318 21-256 (256)
3 3htm_A Speckle-type POZ protei 99.9 5.3E-22 1.8E-26 185.2 7.8 133 16-170 23-156 (172)
4 2vkp_A BTB/POZ domain-containi 99.9 7.8E-22 2.7E-26 171.7 8.3 103 21-132 2-109 (109)
5 3b84_A Zinc finger and BTB dom 99.8 6.3E-22 2.1E-26 176.3 5.2 103 18-131 15-117 (119)
6 4eoz_A Speckle-type POZ protei 99.8 1.9E-22 6.5E-27 183.2 1.7 126 16-158 14-140 (145)
7 2if5_A Zinc finger and BTB dom 99.8 1E-21 3.4E-26 174.3 6.2 104 18-129 16-120 (120)
8 2vpk_A Myoneurin; transcriptio 99.8 1.4E-21 4.9E-26 172.6 6.6 102 18-130 13-116 (116)
9 1r29_A B-cell lymphoma 6 prote 99.8 2.4E-21 8.2E-26 173.7 7.8 104 18-130 20-125 (127)
10 1buo_A POZ domain, protein (pr 99.8 2.1E-21 7E-26 173.3 6.5 103 17-131 18-120 (121)
11 2yy9_A Zinc finger and BTB dom 99.8 1E-21 3.5E-26 179.0 4.3 106 17-133 15-120 (135)
12 2z8h_A Transcription regulator 99.8 3.1E-21 1.1E-25 176.0 6.6 109 18-135 27-136 (138)
13 2ppi_A Gigaxonin; BTB domain, 99.8 3.6E-21 1.2E-25 177.6 6.0 104 18-129 38-144 (144)
14 3ohu_A Transcription regulator 99.8 1.7E-21 5.8E-26 174.3 2.8 102 18-128 23-125 (125)
15 3ga1_A Nucleus accumbens-assoc 99.8 2.1E-21 7.3E-26 175.0 3.1 103 18-131 24-127 (129)
16 2q81_A MIZ-1 protein; BTB/POZ 99.8 2.3E-21 7.8E-26 172.7 3.1 100 18-129 18-117 (119)
17 3m5b_A Zinc finger and BTB dom 99.8 1.2E-20 4.2E-25 169.3 6.7 94 21-130 24-117 (119)
18 2ihc_A Transcription regulator 99.8 4.5E-21 1.5E-25 172.0 2.8 104 17-129 19-123 (124)
19 3hqi_A Speckle-type POZ protei 99.8 1.7E-19 6E-24 184.3 7.8 124 18-158 165-289 (312)
20 3fkc_A Transcriptional regulat 99.7 6.4E-19 2.2E-23 156.8 4.8 90 18-113 22-112 (116)
21 2ast_A S-phase kinase-associat 99.4 1.4E-13 4.7E-18 129.6 5.2 112 30-162 3-144 (159)
22 4ajy_C Transcription elongatio 99.2 2E-11 6.8E-16 105.9 6.1 79 30-111 4-97 (97)
23 1fs1_B SKP1, cyclin A/CDK2-ass 99.1 8.7E-11 3E-15 108.6 5.3 92 30-133 4-122 (141)
24 2p1m_A SKP1-like protein 1A; F 98.9 1.2E-10 4.1E-15 109.8 1.0 93 30-133 6-126 (160)
25 1hv2_A Elongin C, ELC1; protei 98.3 4.5E-07 1.6E-11 79.1 5.3 79 30-111 6-99 (99)
26 2fnj_C Transcription elongatio 98.3 4.7E-07 1.6E-11 78.5 5.0 79 30-111 3-96 (96)
27 3v7d_A Suppressor of kinetocho 98.2 9.6E-07 3.3E-11 84.0 5.6 95 29-132 8-133 (169)
28 1vcb_B Protein (elongin C); tu 97.6 2.8E-05 9.4E-10 69.4 3.2 79 30-111 19-112 (112)
29 3drz_A BTB/POZ domain-containi 97.4 0.00034 1.2E-08 61.5 7.0 92 29-129 7-105 (107)
30 3drx_A BTB/POZ domain-containi 95.6 0.025 8.5E-07 55.4 7.6 93 29-130 13-112 (202)
31 2eqx_A Kelch repeat and BTB do 95.3 0.0054 1.9E-07 53.2 1.7 71 142-239 9-79 (105)
32 3kvt_A Potassium channel prote 94.6 0.014 4.8E-07 52.1 2.5 82 30-114 7-92 (115)
33 1t1d_A Protein (potassium chan 91.5 0.19 6.6E-06 43.6 4.8 81 30-113 3-88 (100)
34 1s1g_A Potassium voltage-gated 90.7 0.14 4.9E-06 46.1 3.3 79 29-113 14-98 (124)
35 1nn7_A Potassium channel KV4.2 90.1 0.097 3.3E-06 45.8 1.5 78 30-113 2-85 (105)
36 2nz0_B Potassium voltage-gated 88.2 0.21 7.1E-06 46.0 2.4 82 26-113 33-120 (140)
37 1pd7_B MAD1; PAH2, SIN3, eukar 64.5 1.7 5.8E-05 29.0 0.4 17 97-113 3-19 (26)
38 1vjh_A BET V I allergen family 46.3 12 0.0004 33.0 2.9 33 398-441 90-122 (122)
39 2r9r_B Paddle chimera voltage 37.1 25 0.00084 38.4 4.3 83 29-114 53-140 (514)
40 2eqx_A Kelch repeat and BTB do 33.2 25 0.00086 29.8 2.9 36 91-132 5-40 (105)
No 1
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=99.93 E-value=2.1e-26 Score=232.51 Aligned_cols=229 Identities=13% Similarity=0.119 Sum_probs=174.4
Q ss_pred cccccccCCCeeEEEEEc---CEEEEeccceeccCChHHHHhhCCC-CCCCcceEEec------CCCCCHHHHHHHHHHh
Q 007644 18 ATRTVISDAPSDLVIQVN---NIRYLLHKFPLLPKCGLLQRLCSDP-EDSDSVTIELH------DIPGGEDAFELCAKFC 87 (595)
Q Consensus 18 ~~~~r~~~~l~DVtl~V~---g~~F~lHK~vLas~S~YFr~Lf~~~-~e~~~~~I~L~------d~pGGa~afelll~Fc 87 (595)
-..++.+|.+|||+|.|| |+.|++||.+|+++|+||++||++. .|+...+|.|+ +++ +++|+.+++|+
T Consensus 23 l~~l~~~~~~~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~mf~~~~~e~~~~~i~l~~~~~~~~v~--~~~f~~ll~~~ 100 (279)
T 3i3n_A 23 QNEQRRQGLFCDITLCFGGAGGREFRAHRSVLAAATEYFTPLLSGQFSESRSGRVEMRKWSSEPGPE--PDTVEAVIEYM 100 (279)
T ss_dssp HHHHHHHTTTCCEEEECC----CEEEECHHHHHHHCTTSGGGCCC--------EEECCCCSSTTCSC--HHHHHHHHHHH
T ss_pred HHHHHhcCCCCCeEEEEcCCCCeEEehHHHHHHHcCHHHHHHhcCCCccccCCeEEeccccccCCCC--HHHHHHHHHhh
Confidence 455888999999999998 9999999999999999999999976 67777899998 665 79999999999
Q ss_pred hCCceeecCCchhhHHHhhcccCcccccccchHHHHHHHHhHHhhhcchhhHHHHHhhhhhHHHHHHhcCccccchHHHH
Q 007644 88 YGITINLSAHNFVPAFCAAKFLRMAESVEKGNFILKLESFFHSCILEGWKDSIVTLKTTNKLSEWSENLGIIRRCIDSIV 167 (595)
Q Consensus 88 Yg~~i~It~~NV~~LlcAA~~LqM~e~~~~gNL~~~ce~FL~~~v~~sw~dsl~~L~~C~~L~~~Ae~~~iv~rcidsLa 167 (595)
||+++.++.+||..|+.||++|+|++ |++.|++||.+.+ ...||..++.+|+.+++ +.|.
T Consensus 101 Ytg~~~i~~~~v~~ll~~A~~l~i~~------L~~~c~~~L~~~l---------~~~n~~~i~~~A~~~~~-----~~L~ 160 (279)
T 3i3n_A 101 YTGRIRVSTGSVHEVLELADRFLLIR------LKEFCGEFLKKKL---------HLSNCVAIHSLAHMYTL-----SQLA 160 (279)
T ss_dssp HHSEEEEETTTHHHHHHHHHHTTCHH------HHHHHHHHHHHHC---------CTTTHHHHHHHHHHTTC-----HHHH
T ss_pred CcCCcccCHHHHHHHHHHHHHHCcHH------HHHHHHHHHHHcC---------CcchHHHHHHHHHHcCc-----HHHH
Confidence 99999999999999999999999995 9999999999988 44699999999999987 4555
Q ss_pred HHHhcCCCcccccccccCCCcccccccCCCCCceecccccCCHHHHHHHHHHHHhcCC--CChhhHHHHHHHHHHHHcCC
Q 007644 168 EKILTPISKVSWSYTYTRPGYTQKRHQIAPKDWWTEDISELDIELFRCIVTAVRSTYM--LPPQLIGEALHVYACRWLPD 245 (595)
Q Consensus 168 ~ka~~~~~~~~~s~~~~~~~~~~~~~~~~~~~WW~EDl~~L~~d~f~rvI~am~s~g~--~~ee~V~~aL~~Ya~rwL~~ 245 (595)
.++.. +.. .++...+..+++..|+.+.+..+| .+..+ .+|+.|++++++|++.-.
T Consensus 161 ~~~~~--------~i~----------~~f~~v~~~~~f~~L~~~~l~~lL---~~d~L~v~sE~~vf~av~~W~~~~~-- 217 (279)
T 3i3n_A 161 LKAAD--------MIR----------RNFHKVIQDEEFYTLPFHLIRDWL---SDLEITVDSEEVLFETVLKWVQRNA-- 217 (279)
T ss_dssp HHHHH--------HHH----------HTHHHHTTSSGGGGSCHHHHHHHH---TCSSCCCSCHHHHHHHHHHHHHTTH--
T ss_pred HHHHH--------HHH----------HHHHHHhcCcChhcCCHHHHHHHh---cCcCCCCCCHHHHHHHHHHHHHcCH--
Confidence 55431 110 112223446889999999999999 55543 357899999999983110
Q ss_pred cccccCCCCCCCCCCCCcccchhhhhhhHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHhcCCCHHHHHHHHH
Q 007644 246 ITKTKTRSTESSSGSQTQTDAISVGKNRRILETIVSMIPSDRGSVSVGFLLRLLSTAIYLGGVSPVTKTELRR 318 (595)
Q Consensus 246 ~~~~~~~~~~~~~~~~s~~~~~~~~~~R~llEtiV~lLP~er~svsc~fLf~LLR~A~~l~~as~~cr~~LEr 318 (595)
...+..+..+...+ .=+.+|..+|..+++..-.+. .++.|+.-|..
T Consensus 218 ------------------------~~r~~~~~~ll~~V--Rf~l~~~~~L~~~v~~~~l~~-~~~~c~~~l~e 263 (279)
T 3i3n_A 218 ------------------------EERERYFEELFKLL--RLSQMKPTYLTRHVKPERLVA-NNEVCVKLVAD 263 (279)
T ss_dssp ------------------------HHHTTTHHHHHTTS--CGGGSCHHHHHHTTTTSHHHH-TCHHHHHHHHH
T ss_pred ------------------------HHHHHHHHHHHHhc--CCCCCCHHHHHHHhhccchhc-CCHHHHHHHHH
Confidence 01112333333332 124588999999998888888 89999887764
No 2
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=99.92 E-value=1.5e-26 Score=230.61 Aligned_cols=230 Identities=11% Similarity=0.085 Sum_probs=158.0
Q ss_pred ccccccccCCCeeEEEEEcCEEEEeccceeccCChHHHHhhCCC-C--CCCcceEEecCCCCCHHHHHHHHHHhhCCcee
Q 007644 17 EATRTVISDAPSDLVIQVNNIRYLLHKFPLLPKCGLLQRLCSDP-E--DSDSVTIELHDIPGGEDAFELCAKFCYGITIN 93 (595)
Q Consensus 17 ~~~~~r~~~~l~DVtl~V~g~~F~lHK~vLas~S~YFr~Lf~~~-~--e~~~~~I~L~d~pGGa~afelll~FcYg~~i~ 93 (595)
+-..++.++.+|||+|.|||+.|++||.+|+++|+||++||++. . ++...+|.|++++ +++|+.+++|+||+++.
T Consensus 21 ~l~~l~~~~~~~Dv~l~v~~~~f~~Hr~vLaa~S~yF~~mf~~~~~~~e~~~~~i~l~~v~--~~~f~~ll~~~Yt~~~~ 98 (256)
T 3hve_A 21 ALSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGIS--VMVMREILDYIFSGQIR 98 (256)
T ss_dssp HHHTCCC--CCCCEEEEETTEEEEECHHHHHTTCHHHHHTC-----------CEEECSSCC--HHHHHHHHHHHHHSCCC
T ss_pred HHHHHHhcCCCcceEEEECCEEEechHHHHHHcCHHHHHHhCCCCCcccCCCCeEEeCCCC--HHHHHHHHhhccCCCCc
Confidence 34568899999999999999999999999999999999999875 3 5566789999998 79999999999999999
Q ss_pred ecCCchhhHHHhhcccCcccccccchHHHHHHHHhHHhhhcchhhHHHHHhhhhhHHHHHHhcCccccchHHHHHHHhcC
Q 007644 94 LSAHNFVPAFCAAKFLRMAESVEKGNFILKLESFFHSCILEGWKDSIVTLKTTNKLSEWSENLGIIRRCIDSIVEKILTP 173 (595)
Q Consensus 94 It~~NV~~LlcAA~~LqM~e~~~~gNL~~~ce~FL~~~v~~sw~dsl~~L~~C~~L~~~Ae~~~iv~rcidsLa~ka~~~ 173 (595)
++.+||..++.||++|||++ |++.|++||.+.+. ..||..++.+|+.+++ +.|..++..
T Consensus 99 i~~~~v~~ll~~A~~l~i~~------l~~~c~~~L~~~l~---------~~n~~~i~~~A~~~~~-----~~L~~~~~~- 157 (256)
T 3hve_A 99 LNEDTIQDVVQAADLLLLTD------LKTLCCEFLEGCIA---------AENCIGIRDFALHYCL-----HHVHYLATE- 157 (256)
T ss_dssp CC-CCHHHHHHHHHHHTCHH------HHHHHHHHHHHTCC---------SSTTHHHHHHHHHTTC-----HHHHHHHHH-
T ss_pred ccHhHHHHHHHHHHHHChHH------HHHHHHHHHHhhCC---------HhhHHHHHHHHHHcCc-----HHHHHHHHH-
Confidence 99999999999999999996 99999999999984 4599999999999987 456555431
Q ss_pred CCcccccccccCCCcccccccCCCCCceecccccCCHHHHHHHHHHHHhcCC--CChhhHHHHHHHHHHHHcCCcccccC
Q 007644 174 ISKVSWSYTYTRPGYTQKRHQIAPKDWWTEDISELDIELFRCIVTAVRSTYM--LPPQLIGEALHVYACRWLPDITKTKT 251 (595)
Q Consensus 174 ~~~~~~s~~~~~~~~~~~~~~~~~~~WW~EDl~~L~~d~f~rvI~am~s~g~--~~ee~V~~aL~~Ya~rwL~~~~~~~~ 251 (595)
+.. .++...+-.+++..|+.+.+..+| .+..+ .+|+.|++++++|+ +...
T Consensus 158 -------~i~----------~~f~~v~~~~~f~~L~~~~l~~lL---~~d~L~v~~E~~v~~av~~W~--------~~~~ 209 (256)
T 3hve_A 158 -------YLE----------THFRDVSSTEEFLELSPQKLKEVI---SLEKLNVGNERYVFEAVIRWI--------AHDT 209 (256)
T ss_dssp -------HHH----------HHHHHHTTCHHHHSSCHHHHHHHH---HCC-------CTTHHHHTTTC--------CC--
T ss_pred -------HHH----------HHHHHHhCCcchhcCCHHHHHHHH---ccCCCCCCCHHHHHHHHHHHH--------HcCH
Confidence 110 112222345789999999999999 44443 35778999998886 1110
Q ss_pred CCCCCCCCCCCcccchhhhhhhHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHhcCCC-HHHHHHHHH
Q 007644 252 RSTESSSGSQTQTDAISVGKNRRILETIVSMIPSDRGSVSVGFLLRLLSTAIYLGGVS-PVTKTELRR 318 (595)
Q Consensus 252 ~~~~~~~~~~s~~~~~~~~~~R~llEtiV~lLP~er~svsc~fLf~LLR~A~~l~~as-~~cr~~LEr 318 (595)
. .. ...-..+++.| ++ +.+|..||...++.--.+. .+ +.||.-|++
T Consensus 210 ------~-~R-------~~~~~~ll~~V-Rf-----~~l~~~~l~~~v~~~~l~~-~~~~~c~~ll~~ 256 (256)
T 3hve_A 210 ------E-IR-------KVHMKDVMSAL-WV-----SGLDSSYLREQMLNEPLVR-EIVKECSNIPLS 256 (256)
T ss_dssp ------C-CS-------TTTHHHHHHHH-HH-----HTTCC-CHHHHHHTSTTHH-HHHCC-------
T ss_pred ------H-HH-------HHHHHHHHHhC-CC-----CCCCHHHHHHHHhcChHHH-hhHHHHHHHhhC
Confidence 0 00 00112456554 33 1234457887777666666 55 578877764
No 3
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=99.85 E-value=5.3e-22 Score=185.16 Aligned_cols=133 Identities=14% Similarity=0.147 Sum_probs=119.4
Q ss_pred cccccccccCCCeeEEEEEcCEEEEeccceeccCChHHHHhhCCC-CCCCcceEEecCCCCCHHHHHHHHHHhhCCceee
Q 007644 16 EEATRTVISDAPSDLVIQVNNIRYLLHKFPLLPKCGLLQRLCSDP-EDSDSVTIELHDIPGGEDAFELCAKFCYGITINL 94 (595)
Q Consensus 16 ~~~~~~r~~~~l~DVtl~V~g~~F~lHK~vLas~S~YFr~Lf~~~-~e~~~~~I~L~d~pGGa~afelll~FcYg~~i~I 94 (595)
.+-.+++.++.+|||+|.|+|+.|++||.+|+++|+||++||.+. .++....|.|++++ +++|+.+++|+||+++.+
T Consensus 23 ~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~--~~~f~~~l~~~Yt~~~~~ 100 (172)
T 3htm_A 23 DELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVE--PEVFKEMMCFIYTGKAPN 100 (172)
T ss_dssp HHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSCCCGGGTTEEEECSSC--HHHHHHHHHHHHHSCCTT
T ss_pred HHHHHHHhCCCCcceEEEECCEEEEeeHHHHHHcCHHHHHHHccCccccCCCeEEecCCC--HHHHHHHHHHHhCCCCCC
Confidence 355677889999999999999999999999999999999999975 56667899999998 799999999999999999
Q ss_pred cCCchhhHHHhhcccCcccccccchHHHHHHHHhHHhhhcchhhHHHHHhhhhhHHHHHHhcCccccchHHHHHHH
Q 007644 95 SAHNFVPAFCAAKFLRMAESVEKGNFILKLESFFHSCILEGWKDSIVTLKTTNKLSEWSENLGIIRRCIDSIVEKI 170 (595)
Q Consensus 95 t~~NV~~LlcAA~~LqM~e~~~~gNL~~~ce~FL~~~v~~sw~dsl~~L~~C~~L~~~Ae~~~iv~rcidsLa~ka 170 (595)
+.+|+..|+.+|++++|++ |.+.|+.||.+.+ ...||..++.+|+.+++ +.|...+
T Consensus 101 ~~~~~~~ll~~A~~~~~~~------l~~~c~~~l~~~l---------~~~n~~~~~~~A~~~~~-----~~L~~~~ 156 (172)
T 3htm_A 101 LDKMADDLLAAADKYALER------LKVMCEDALCSNL---------SVENAAEILILADLHSA-----DQLKTQA 156 (172)
T ss_dssp GGGTHHHHHHHHHHTTCHH------HHHHHHHHHHHTC---------CTTTHHHHHHHHHHTTC-----HHHHHHH
T ss_pred cHHHHHHHHHHHHHhCcHH------HHHHHHHHHHHhC---------CHHHHHHHHHHHHHhCc-----HHHHHHH
Confidence 9999999999999999996 9999999999988 44699999999999987 4555544
No 4
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=99.85 E-value=7.8e-22 Score=171.67 Aligned_cols=103 Identities=17% Similarity=0.247 Sum_probs=92.7
Q ss_pred ccccCCCeeEEEEEcC----EEEEeccceeccCChHHHHhhCCC-CCCCcceEEecCCCCCHHHHHHHHHHhhCCceeec
Q 007644 21 TVISDAPSDLVIQVNN----IRYLLHKFPLLPKCGLLQRLCSDP-EDSDSVTIELHDIPGGEDAFELCAKFCYGITINLS 95 (595)
Q Consensus 21 ~r~~~~l~DVtl~V~g----~~F~lHK~vLas~S~YFr~Lf~~~-~e~~~~~I~L~d~pGGa~afelll~FcYg~~i~It 95 (595)
++.++.+|||+|.|+| +.|++||.+|+++|+||++||.+. .|+. ..|.|++++ +++|+.+++|+||+++.++
T Consensus 2 l~~~~~~~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~~~e~~-~~i~l~~~~--~~~f~~~l~~iYt~~~~~~ 78 (109)
T 2vkp_A 2 MFNNELMADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGDLAEVK-SEIHIPDVE--PAAFLILLKYMYSDEIDLE 78 (109)
T ss_dssp CTTCCTTCCEEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC------C-CEEEETTSC--HHHHHHHHHHHHHCCCCCC
T ss_pred cccCCCcccEEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCCcccCC-CeEEeCCCC--HHHHHHHHHHHcCCCccCC
Confidence 5788999999999998 999999999999999999999975 4555 889999998 7999999999999999999
Q ss_pred CCchhhHHHhhcccCcccccccchHHHHHHHHhHHhh
Q 007644 96 AHNFVPAFCAAKFLRMAESVEKGNFILKLESFFHSCI 132 (595)
Q Consensus 96 ~~NV~~LlcAA~~LqM~e~~~~gNL~~~ce~FL~~~v 132 (595)
++||..++.+|++++|++ |.+.|++||.+.+
T Consensus 79 ~~~~~~ll~~A~~~~~~~------L~~~c~~~l~~~l 109 (109)
T 2vkp_A 79 ADTVLATLYAAKKYIVPA------LAKACVNFLETSL 109 (109)
T ss_dssp TTTHHHHHHHHHHTTCHH------HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhCcHH------HHHHHHHHHHhhC
Confidence 999999999999999995 9999999998753
No 5
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.84 E-value=6.3e-22 Score=176.35 Aligned_cols=103 Identities=20% Similarity=0.169 Sum_probs=93.2
Q ss_pred cccccccCCCeeEEEEEcCEEEEeccceeccCChHHHHhhCCCCCCCcceEEecCCCCCHHHHHHHHHHhhCCceeecCC
Q 007644 18 ATRTVISDAPSDLVIQVNNIRYLLHKFPLLPKCGLLQRLCSDPEDSDSVTIELHDIPGGEDAFELCAKFCYGITINLSAH 97 (595)
Q Consensus 18 ~~~~r~~~~l~DVtl~V~g~~F~lHK~vLas~S~YFr~Lf~~~~e~~~~~I~L~d~pGGa~afelll~FcYg~~i~It~~ 97 (595)
-..++.++.+|||+|.|+|+.|++||.+|+++|+||++||.+.. ...|.|+|++ +++|+.+++|+||+++.++.+
T Consensus 15 l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~---~~~i~l~~~~--~~~f~~ll~~iYtg~~~~~~~ 89 (119)
T 3b84_A 15 LNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQSLYGDGS---GGSVVLPAGF--AEIFGLLLDFFYTGHLALTSG 89 (119)
T ss_dssp HHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTTT---CCCEEECGGG--HHHHHHHHHHHHHSCCCCCTT
T ss_pred HHHHHhcCCCcceEEEECCEEEEeeHHHHhhcCHHHHHHHCCCC---CCeEEeCCCC--HHHHHHHHHHHcCCCCccCHH
Confidence 34578899999999999999999999999999999999998754 4679999998 799999999999999999999
Q ss_pred chhhHHHhhcccCcccccccchHHHHHHHHhHHh
Q 007644 98 NFVPAFCAAKFLRMAESVEKGNFILKLESFFHSC 131 (595)
Q Consensus 98 NV~~LlcAA~~LqM~e~~~~gNL~~~ce~FL~~~ 131 (595)
||..|+.||++|+|++ |++.|++||.+.
T Consensus 90 ~v~~ll~~A~~~~i~~------L~~~C~~~l~~~ 117 (119)
T 3b84_A 90 NRDQVLLAARELRVPE------AVELCQSFKPKT 117 (119)
T ss_dssp THHHHHHHHHHTTCHH------HHHHHHHCC---
T ss_pred HHHHHHHHHHHhCcHH------HHHHHHHHHHHc
Confidence 9999999999999996 999999999764
No 6
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.84 E-value=1.9e-22 Score=183.16 Aligned_cols=126 Identities=13% Similarity=0.137 Sum_probs=95.7
Q ss_pred cccccccccCCCeeEEEEEcCEEEEeccceeccCChHHHHhhCCC-CCCCcceEEecCCCCCHHHHHHHHHHhhCCceee
Q 007644 16 EEATRTVISDAPSDLVIQVNNIRYLLHKFPLLPKCGLLQRLCSDP-EDSDSVTIELHDIPGGEDAFELCAKFCYGITINL 94 (595)
Q Consensus 16 ~~~~~~r~~~~l~DVtl~V~g~~F~lHK~vLas~S~YFr~Lf~~~-~e~~~~~I~L~d~pGGa~afelll~FcYg~~i~I 94 (595)
.+-..++.++.+|||+|.|+|+.|++||.+|+++|+||++||.+. .++....|.|++++ +++|+.+++|+||+++.+
T Consensus 14 ~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~--~~~~~~~l~~~Y~~~~~~ 91 (145)
T 4eoz_A 14 DELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVE--PEVFKEMMCFIYTGKAPN 91 (145)
T ss_dssp HHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSSSHHHHHTEEEECSSC--HHHHHHHHHHHHHSCCTT
T ss_pred HHHHHHHhCCCCcceEEEECCEEEEeehHHHHHcCHHHHHHHcCCCcCCCCceEEecCCC--HHHHHHHHHhhccCccCC
Confidence 355667889999999999999999999999999999999999975 45556789999998 799999999999999999
Q ss_pred cCCchhhHHHhhcccCcccccccchHHHHHHHHhHHhhhcchhhHHHHHhhhhhHHHHHHhcCc
Q 007644 95 SAHNFVPAFCAAKFLRMAESVEKGNFILKLESFFHSCILEGWKDSIVTLKTTNKLSEWSENLGI 158 (595)
Q Consensus 95 t~~NV~~LlcAA~~LqM~e~~~~gNL~~~ce~FL~~~v~~sw~dsl~~L~~C~~L~~~Ae~~~i 158 (595)
+.+|+..++.+|++++|++ |.+.|+.||.+.+ ...||..++.+|+.+++
T Consensus 92 ~~~~~~~ll~~A~~~~~~~------l~~~c~~~l~~~l---------~~~n~~~~l~~A~~~~~ 140 (145)
T 4eoz_A 92 LDKMADDLLAAADKYALER------LKVMCEDALCSNL---------SVENAAEILILADLHSA 140 (145)
T ss_dssp GGGTHHHHHHHHHHTTCHH------HHHHHHCC-------------------------------
T ss_pred cHHHHHHHHHHHHHhCHHH------HHHHHHHHHHHhC---------CHHHHHHHHHHHHHhCH
Confidence 9999999999999999996 9999999999988 56799999999999886
No 7
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.84 E-value=1e-21 Score=174.33 Aligned_cols=104 Identities=16% Similarity=0.215 Sum_probs=94.0
Q ss_pred cccccccCCCeeEEEEEcCEEEEeccceeccCChHHHHhhCCC-CCCCcceEEecCCCCCHHHHHHHHHHhhCCceeecC
Q 007644 18 ATRTVISDAPSDLVIQVNNIRYLLHKFPLLPKCGLLQRLCSDP-EDSDSVTIELHDIPGGEDAFELCAKFCYGITINLSA 96 (595)
Q Consensus 18 ~~~~r~~~~l~DVtl~V~g~~F~lHK~vLas~S~YFr~Lf~~~-~e~~~~~I~L~d~pGGa~afelll~FcYg~~i~It~ 96 (595)
-..++.++.+|||+|.|+|+.|++||.+|+++|+||++||.+. .++....|.|++++ +++|+.+++|+||+++.++.
T Consensus 16 l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~--~~~f~~ll~~~Yt~~~~~~~ 93 (120)
T 2if5_A 16 LNEQRTQGLLCDVVILVEGREFPTHRSVLAACSQYFKKLFTSGAVVDQQNVYEIDFVS--AEALTALMDFAYTATLTVST 93 (120)
T ss_dssp HHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHC-----CCSEEECCSSC--HHHHHHHHHHHHHSCCCCCG
T ss_pred HHHHHhcCCCCCeEEEECCEEEeHHHHHHHHhCHHHHHHhcCCccccCCceEEeCCCC--HHHHHHHHHHHcCCCCccCH
Confidence 4457889999999999999999999999999999999999976 56667789999998 79999999999999999999
Q ss_pred CchhhHHHhhcccCcccccccchHHHHHHHHhH
Q 007644 97 HNFVPAFCAAKFLRMAESVEKGNFILKLESFFH 129 (595)
Q Consensus 97 ~NV~~LlcAA~~LqM~e~~~~gNL~~~ce~FL~ 129 (595)
+|+..++.||++++|++ |++.|++||+
T Consensus 94 ~~~~~ll~~A~~~~i~~------L~~~C~~~L~ 120 (120)
T 2if5_A 94 ANVGDILSAARLLEIPA------VSHVCADLLD 120 (120)
T ss_dssp GGHHHHHHHHHHTTCHH------HHHHHHHHHC
T ss_pred HHHHHHHHHHHHhCCHH------HHHHHHHHhC
Confidence 99999999999999996 9999999984
No 8
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.84 E-value=1.4e-21 Score=172.61 Aligned_cols=102 Identities=18% Similarity=0.249 Sum_probs=92.6
Q ss_pred cccccccCCCeeEEEEEcCEEEEeccceeccCChHHHHhhCCCCCCCcceEEec--CCCCCHHHHHHHHHHhhCCceeec
Q 007644 18 ATRTVISDAPSDLVIQVNNIRYLLHKFPLLPKCGLLQRLCSDPEDSDSVTIELH--DIPGGEDAFELCAKFCYGITINLS 95 (595)
Q Consensus 18 ~~~~r~~~~l~DVtl~V~g~~F~lHK~vLas~S~YFr~Lf~~~~e~~~~~I~L~--d~pGGa~afelll~FcYg~~i~It 95 (595)
-..++.++.+|||+|.|+|+.|++||.+|+++|+||++||.+. ....|.|+ +++ +++|+.+++|+||+++.++
T Consensus 13 l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~---~~~~i~l~~~~~~--~~~f~~ll~~~Yt~~~~~~ 87 (116)
T 2vpk_A 13 LNKQREAGFLCDCTIVIGEFQFKAHRNVLASFSEYFGAIYRST---SENNVFLDQSQVK--ADGFQKLLEFIYTGTLNLD 87 (116)
T ss_dssp HHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTC---CCSCEECCTTTCC--HHHHHHHHHHHHHSCCCCC
T ss_pred HHHHHhcCCCCcEEEEECCEEEeccHHHHhhcCHHHHHHHcCC---CCCeEEeecCCCC--HHHHHHHHHHHcCCCcccC
Confidence 3457789999999999999999999999999999999999975 24567777 888 7999999999999999999
Q ss_pred CCchhhHHHhhcccCcccccccchHHHHHHHHhHH
Q 007644 96 AHNFVPAFCAAKFLRMAESVEKGNFILKLESFFHS 130 (595)
Q Consensus 96 ~~NV~~LlcAA~~LqM~e~~~~gNL~~~ce~FL~~ 130 (595)
++||..++.||++|||++ |++.|++||.+
T Consensus 88 ~~~v~~ll~~A~~~~i~~------L~~~C~~~l~~ 116 (116)
T 2vpk_A 88 SWNVKEIHQAADYLKVEE------VVTKCKIKMED 116 (116)
T ss_dssp TTTHHHHHHHHHHTTCHH------HHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHhCCHH------HHHHHHHHHhC
Confidence 999999999999999995 99999999863
No 9
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.84 E-value=2.4e-21 Score=173.73 Aligned_cols=104 Identities=24% Similarity=0.405 Sum_probs=96.4
Q ss_pred cccccccCCCeeEEEEEcCEEEEeccceeccCChHHHHhhCCC-CCCCcceEEe-cCCCCCHHHHHHHHHHhhCCceeec
Q 007644 18 ATRTVISDAPSDLVIQVNNIRYLLHKFPLLPKCGLLQRLCSDP-EDSDSVTIEL-HDIPGGEDAFELCAKFCYGITINLS 95 (595)
Q Consensus 18 ~~~~r~~~~l~DVtl~V~g~~F~lHK~vLas~S~YFr~Lf~~~-~e~~~~~I~L-~d~pGGa~afelll~FcYg~~i~It 95 (595)
-..++.++.+|||+|.|+|+.|++||.+|+++|+||++||.+. .+ ....|.| ++++ +++|+.+++|+||+++.++
T Consensus 20 l~~l~~~~~~~Dv~l~v~~~~~~aHk~iLaa~S~~F~~~f~~~~~e-~~~~i~l~~~~~--~~~f~~ll~~~Ytg~~~~~ 96 (127)
T 1r29_A 20 LNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKR-NLSVINLDPEIN--PEGFNILLDFMYTSRLNLR 96 (127)
T ss_dssp HHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTSTTTT-TCSEEECCTTSC--HHHHHHHHHHHHHSCCCCC
T ss_pred HHHHHhcCCCCCEEEEECCEEEehHHHHHHHhCHHHHHHhcCCccC-CCCEEEeCCCCC--HHHHHHHHHHHcCCCcCcC
Confidence 3457889999999999999999999999999999999999976 44 6678999 8998 7999999999999999999
Q ss_pred CCchhhHHHhhcccCcccccccchHHHHHHHHhHH
Q 007644 96 AHNFVPAFCAAKFLRMAESVEKGNFILKLESFFHS 130 (595)
Q Consensus 96 ~~NV~~LlcAA~~LqM~e~~~~gNL~~~ce~FL~~ 130 (595)
.+|+..|+.||++|+|++ |++.|++||.+
T Consensus 97 ~~~~~~ll~~A~~~~i~~------L~~~c~~~l~~ 125 (127)
T 1r29_A 97 EGNIMAVMATAMYLQMEH------VVDTCRKFIKA 125 (127)
T ss_dssp TTTHHHHHHHHHHTTCHH------HHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCHH------HHHHHHHHHHh
Confidence 999999999999999996 99999999975
No 10
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.83 E-value=2.1e-21 Score=173.27 Aligned_cols=103 Identities=17% Similarity=0.240 Sum_probs=95.3
Q ss_pred ccccccccCCCeeEEEEEcCEEEEeccceeccCChHHHHhhCCCCCCCcceEEecCCCCCHHHHHHHHHHhhCCceeecC
Q 007644 17 EATRTVISDAPSDLVIQVNNIRYLLHKFPLLPKCGLLQRLCSDPEDSDSVTIELHDIPGGEDAFELCAKFCYGITINLSA 96 (595)
Q Consensus 17 ~~~~~r~~~~l~DVtl~V~g~~F~lHK~vLas~S~YFr~Lf~~~~e~~~~~I~L~d~pGGa~afelll~FcYg~~i~It~ 96 (595)
+-..++.++.+|||+|.|+|+.|++||.+|+++|+||++||.+. ..+|.|++++ +++|+.+++|+||+++.+++
T Consensus 18 ~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~----~~~i~l~~~~--~~~f~~ll~~~Ytg~~~~~~ 91 (121)
T 1buo_A 18 KANQMRLAGTLCDVVIMVDSQEFHAHRTVLACTSKMFEILFHRN----SQHYTLDFLS--PKTFQQILEYAYTATLQAKA 91 (121)
T ss_dssp HHHHHHHHTTTCCEEEEESSCEEEECHHHHHHHCHHHHHHTTSC----CSEEEECSSC--HHHHHHHHHHHHHSCCCCCG
T ss_pred HHHHHHhcCCCCCEEEEECCEEEehhHHHHhhcCHHHHHHHcCC----CcEEEeCCCC--HHHHHHHHHhhcCCCcCCCH
Confidence 34567889999999999999999999999999999999999863 4579999998 79999999999999999999
Q ss_pred CchhhHHHhhcccCcccccccchHHHHHHHHhHHh
Q 007644 97 HNFVPAFCAAKFLRMAESVEKGNFILKLESFFHSC 131 (595)
Q Consensus 97 ~NV~~LlcAA~~LqM~e~~~~gNL~~~ce~FL~~~ 131 (595)
+|+..++.||++|+|++ |.+.|++||.+.
T Consensus 92 ~~~~~ll~~A~~~~i~~------L~~~c~~~l~~~ 120 (121)
T 1buo_A 92 EDLDDLLYAAEILEIEY------LEEQCLKMLETI 120 (121)
T ss_dssp GGHHHHHHHHHHHTCHH------HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCHH------HHHHHHHHHHHh
Confidence 99999999999999995 999999999874
No 11
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.83 E-value=1e-21 Score=179.03 Aligned_cols=106 Identities=22% Similarity=0.191 Sum_probs=92.7
Q ss_pred ccccccccCCCeeEEEEEcCEEEEeccceeccCChHHHHhhCCCCCCCcceEEecCCCCCHHHHHHHHHHhhCCceeecC
Q 007644 17 EATRTVISDAPSDLVIQVNNIRYLLHKFPLLPKCGLLQRLCSDPEDSDSVTIELHDIPGGEDAFELCAKFCYGITINLSA 96 (595)
Q Consensus 17 ~~~~~r~~~~l~DVtl~V~g~~F~lHK~vLas~S~YFr~Lf~~~~e~~~~~I~L~d~pGGa~afelll~FcYg~~i~It~ 96 (595)
+-..++.++.+|||+|.|+|+.|++||.||+++|+||++||.+.. ...|.|++++ +++|+.+++|+||+++.++.
T Consensus 15 ~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~---~~~i~l~~~~--~~~f~~lL~fiYtg~~~i~~ 89 (135)
T 2yy9_A 15 ELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQRIYGDGT---GGSVVLPAGF--AEIFGLLLDFFYTGHLALTS 89 (135)
T ss_dssp HHHHHHHTTTTCCEEEEETTEEEEECHHHHHHHCHHHHHTCC-------CCEEECGGG--HHHHHHHHHHHHHSCCCCCT
T ss_pred HHHHHHhcCCCcceEEEECCEEEehHHHHHHHhCHHHHHHHcCCC---CCeEEeCCCC--HHHHHHHHHHHhCCCCCCCH
Confidence 345688899999999999999999999999999999999998643 4579999998 79999999999999999999
Q ss_pred CchhhHHHhhcccCcccccccchHHHHHHHHhHHhhh
Q 007644 97 HNFVPAFCAAKFLRMAESVEKGNFILKLESFFHSCIL 133 (595)
Q Consensus 97 ~NV~~LlcAA~~LqM~e~~~~gNL~~~ce~FL~~~v~ 133 (595)
+||..|+.||++|+|++ |++.|++||.+.+.
T Consensus 90 ~~v~~ll~~A~~l~i~~------L~~~C~~~l~~~l~ 120 (135)
T 2yy9_A 90 GNRDQVLLAAKELRVPE------AVELCQSFQPQTSV 120 (135)
T ss_dssp TTHHHHHHHHHHTTCHH------HHHHHHHCCC----
T ss_pred HHHHHHHHHHHHhCcHH------HHHHHHHHHHHhcc
Confidence 99999999999999995 99999999988763
No 12
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.83 E-value=3.1e-21 Score=176.03 Aligned_cols=109 Identities=18% Similarity=0.245 Sum_probs=97.9
Q ss_pred cccccccCCCeeEEEEEcCEEEEeccceeccCChHHHHhhCCCCCCCcceEEec-CCCCCHHHHHHHHHHhhCCceeecC
Q 007644 18 ATRTVISDAPSDLVIQVNNIRYLLHKFPLLPKCGLLQRLCSDPEDSDSVTIELH-DIPGGEDAFELCAKFCYGITINLSA 96 (595)
Q Consensus 18 ~~~~r~~~~l~DVtl~V~g~~F~lHK~vLas~S~YFr~Lf~~~~e~~~~~I~L~-d~pGGa~afelll~FcYg~~i~It~ 96 (595)
-..++.++.+|||+|.|+|+.|++||.+|+++|+||++||.+... ....|.|+ +++ +++|+.+++|+||+++.++.
T Consensus 27 l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~-e~~~i~l~~~v~--~~~~~~lL~~~Ytg~~~i~~ 103 (138)
T 2z8h_A 27 LNDQRKKDVLCDVTVLVEGQRFRAHRSVLAACSSYFHSRIVGQTD-AELTVTLPEEVT--VKGFEPLIQFAYTAKLILSK 103 (138)
T ss_dssp HHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTCCC-TTEEEECCTTSC--HHHHHHHHHHHHHSCCCCCT
T ss_pred HHHHHhhCCCcCeEEEECCEEEechHHHHHHcCHHHHHHHhcCCC-CCceEEeCCCCC--HHHHHHHHHHhcCCCcccCH
Confidence 456788999999999999999999999999999999999997532 23578884 888 79999999999999999999
Q ss_pred CchhhHHHhhcccCcccccccchHHHHHHHHhHHhhhcc
Q 007644 97 HNFVPAFCAAKFLRMAESVEKGNFILKLESFFHSCILEG 135 (595)
Q Consensus 97 ~NV~~LlcAA~~LqM~e~~~~gNL~~~ce~FL~~~v~~s 135 (595)
+||..|+.||++|||++ |++.|++||.+.+..+
T Consensus 104 ~~v~~ll~~A~~~~i~~------L~~~C~~~l~~~l~~s 136 (138)
T 2z8h_A 104 DNVDEVCRCVEFLSVHN------IEESCFQFLKFKFLDS 136 (138)
T ss_dssp TTHHHHHHHHHHHTCGG------GHHHHHHHTTCCCSCC
T ss_pred HHHHHHHHHHHHhCCHH------HHHHHHHHHHHhcccc
Confidence 99999999999999996 9999999999887543
No 13
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.82 E-value=3.6e-21 Score=177.63 Aligned_cols=104 Identities=13% Similarity=0.111 Sum_probs=91.9
Q ss_pred cccccccCCCeeEEEEEcCEEEEeccceeccCChHHHHhhCCC-C--CCCcceEEecCCCCCHHHHHHHHHHhhCCceee
Q 007644 18 ATRTVISDAPSDLVIQVNNIRYLLHKFPLLPKCGLLQRLCSDP-E--DSDSVTIELHDIPGGEDAFELCAKFCYGITINL 94 (595)
Q Consensus 18 ~~~~r~~~~l~DVtl~V~g~~F~lHK~vLas~S~YFr~Lf~~~-~--e~~~~~I~L~d~pGGa~afelll~FcYg~~i~I 94 (595)
-..++.++.+|||+|.|+|+.|++||.+|+++|+||++||.+. . ++....|.|++++ +++|+.+++|+||+++.+
T Consensus 38 l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~~e~e~~~~~I~l~~v~--~~~f~~lL~fiYtg~~~i 115 (144)
T 2ppi_A 38 LSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGIS--VMVMREILDYIFSGQIRL 115 (144)
T ss_dssp HHHTTC--CCCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHCC-----CCCEEECCSSC--HHHHHHHHHHHTTSCCCC
T ss_pred HHHHHhcCCCcceEEEECCEEEehHHHHHHHcCHHHHHHHcCCCccccCCCcEEEeCCCC--HHHHHHHHHHHhCCCCCC
Confidence 3457889999999999999999999999999999999999864 2 3566789999998 799999999999999999
Q ss_pred cCCchhhHHHhhcccCcccccccchHHHHHHHHhH
Q 007644 95 SAHNFVPAFCAAKFLRMAESVEKGNFILKLESFFH 129 (595)
Q Consensus 95 t~~NV~~LlcAA~~LqM~e~~~~gNL~~~ce~FL~ 129 (595)
+.+||..|+.||++|+|++ |++.|++||.
T Consensus 116 ~~~~v~~ll~~A~~l~i~~------L~~~C~~~L~ 144 (144)
T 2ppi_A 116 NEDTIQDVVQAADLLLLTD------LKTLCCEFLE 144 (144)
T ss_dssp CTTTHHHHHHHHHHTTCHH------HHHHHHTTC-
T ss_pred CHHHHHHHHHHHHHhCcHH------HHHHHHHHhC
Confidence 9999999999999999996 9999999984
No 14
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=99.82 E-value=1.7e-21 Score=174.25 Aligned_cols=102 Identities=19% Similarity=0.245 Sum_probs=92.2
Q ss_pred cccccccCCCeeEEEEEcCEEEEeccceeccCChHHHHhhCCCCCCCcceEEecC-CCCCHHHHHHHHHHhhCCceeecC
Q 007644 18 ATRTVISDAPSDLVIQVNNIRYLLHKFPLLPKCGLLQRLCSDPEDSDSVTIELHD-IPGGEDAFELCAKFCYGITINLSA 96 (595)
Q Consensus 18 ~~~~r~~~~l~DVtl~V~g~~F~lHK~vLas~S~YFr~Lf~~~~e~~~~~I~L~d-~pGGa~afelll~FcYg~~i~It~ 96 (595)
-..++.++.+|||+|.|+|+.|++||.+|+++|+||++||.+.... ...|.+++ ++ +++|+.+++|+||+++.++.
T Consensus 23 l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e-~~~i~l~~~~~--~~~f~~~l~~iYtg~~~~~~ 99 (125)
T 3ohu_A 23 LNDQRKKDILCDVTLIVERKEFRAHRAVLAACSEYFWQALVGQTKN-DLVVSLPEEVT--ARGFGPLLQFAYTAKLLLSR 99 (125)
T ss_dssp HHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTCCCS-SCEEECCTTCC--HHHHHHHHHHHTTSEEEECT
T ss_pred HHHHHhcCCccceEEEECCEEEechHHHHHHcCHHHHHHhcCCCCC-CcEEEeCCCCC--HHHHHHHHHhHcCCceEECH
Confidence 3467889999999999999999999999999999999999975322 56899988 88 79999999999999999999
Q ss_pred CchhhHHHhhcccCcccccccchHHHHHHHHh
Q 007644 97 HNFVPAFCAAKFLRMAESVEKGNFILKLESFF 128 (595)
Q Consensus 97 ~NV~~LlcAA~~LqM~e~~~~gNL~~~ce~FL 128 (595)
+||..|+.||++|+|++ |++.|++||
T Consensus 100 ~~v~~ll~~A~~l~i~~------L~~~C~~~L 125 (125)
T 3ohu_A 100 ENIREVIRCAEFLRMHN------LEDSCFSFL 125 (125)
T ss_dssp TTHHHHHHHHHHHTBSS------CTTSSCCCC
T ss_pred HHHHHHHHHHHHhCCHH------HHHHHHHhC
Confidence 99999999999999996 778888775
No 15
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=99.82 E-value=2.1e-21 Score=174.99 Aligned_cols=103 Identities=18% Similarity=0.322 Sum_probs=88.0
Q ss_pred cccccccCCCeeEEEEEcCEEEEeccceeccCChHHHHhhCCCCCCCcceEEec-CCCCCHHHHHHHHHHhhCCceeecC
Q 007644 18 ATRTVISDAPSDLVIQVNNIRYLLHKFPLLPKCGLLQRLCSDPEDSDSVTIELH-DIPGGEDAFELCAKFCYGITINLSA 96 (595)
Q Consensus 18 ~~~~r~~~~l~DVtl~V~g~~F~lHK~vLas~S~YFr~Lf~~~~e~~~~~I~L~-d~pGGa~afelll~FcYg~~i~It~ 96 (595)
-..++.++.+|||+|.|+|+.|++||.+|+++|+||++||.+. ....|.|+ +++ +++|+.+++|+||+++.++.
T Consensus 24 l~~l~~~~~~~Dv~l~v~~~~~~~Hk~vLaa~S~~F~~~f~~~---~~~~i~l~~~~~--~~~f~~ll~~iYtg~~~i~~ 98 (129)
T 3ga1_A 24 LNEQRLQGLYCDVSVVVKGHAFKAHRAVLAASSSYFRDLFNNS---RSAVVELPAAVQ--PQSFQQILSFCYTGRLSMNV 98 (129)
T ss_dssp HHHHHHTTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHHHC---CCSEEECCTTCC--HHHHHHHHHHHHHSEEECCT
T ss_pred HHHHHhcCCCcceEEEECCEEEEehHHHHHHcCHHHHHHHcCC---CCCEEEECCCCC--HHHHHHHHHHHhCCccccCH
Confidence 3457788999999999999999999999999999999999865 45689996 898 79999999999999999999
Q ss_pred CchhhHHHhhcccCcccccccchHHHHHHHHhHHh
Q 007644 97 HNFVPAFCAAKFLRMAESVEKGNFILKLESFFHSC 131 (595)
Q Consensus 97 ~NV~~LlcAA~~LqM~e~~~~gNL~~~ce~FL~~~ 131 (595)
+||..|+.||++|||++ |++.|++||.+.
T Consensus 99 ~~~~~ll~~A~~~~i~~------l~~~C~~~L~~~ 127 (129)
T 3ga1_A 99 GDQDLLMYTAGFLQIQE------IMEKGTEFFLKV 127 (129)
T ss_dssp TTHHHHHHHHHHTTBTT------SSCC--------
T ss_pred HHHHHHHHHHHHhCCHH------HHHHHHHHHHHh
Confidence 99999999999999996 889999999864
No 16
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.82 E-value=2.3e-21 Score=172.71 Aligned_cols=100 Identities=18% Similarity=0.224 Sum_probs=91.4
Q ss_pred cccccccCCCeeEEEEEcCEEEEeccceeccCChHHHHhhCCCCCCCcceEEecCCCCCHHHHHHHHHHhhCCceeecCC
Q 007644 18 ATRTVISDAPSDLVIQVNNIRYLLHKFPLLPKCGLLQRLCSDPEDSDSVTIELHDIPGGEDAFELCAKFCYGITINLSAH 97 (595)
Q Consensus 18 ~~~~r~~~~l~DVtl~V~g~~F~lHK~vLas~S~YFr~Lf~~~~e~~~~~I~L~d~pGGa~afelll~FcYg~~i~It~~ 97 (595)
-..++.++.+|||+|.|+|+.|++||.+|+++|+||++||++. ...|.|++++ +++|+.+++|+||+++.++.+
T Consensus 18 l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~----~~~i~l~~~~--~~~f~~ll~~~Ytg~~~i~~~ 91 (119)
T 2q81_A 18 LNQQRQLGLLCDCTFVVDGVHFKAHKAVLAACSEYFKMLFVDQ----KDVVHLDISN--AAGLGQVLEFMYTAKLSLSPE 91 (119)
T ss_dssp HHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHC----CSGGGGGGCC--HHHHHHHHHHHHHSCCCCCTT
T ss_pred HHHHHhcCCCcceEEEECCEEEehhHHHHHHcCHHHHHHHcCC----CCEEEeCCCC--HHHHHHHHHHHcCCCCccCHH
Confidence 3457889999999999999999999999999999999999863 3457778887 799999999999999999999
Q ss_pred chhhHHHhhcccCcccccccchHHHHHHHHhH
Q 007644 98 NFVPAFCAAKFLRMAESVEKGNFILKLESFFH 129 (595)
Q Consensus 98 NV~~LlcAA~~LqM~e~~~~gNL~~~ce~FL~ 129 (595)
||..|+.||++|+|++ |++.|++||.
T Consensus 92 ~~~~ll~~A~~l~i~~------L~~~C~~~l~ 117 (119)
T 2q81_A 92 NVDDVLAVATFLQMQD------IITACHALKS 117 (119)
T ss_dssp THHHHHHHHHHTTCHH------HHHHHHHHHT
T ss_pred HHHHHHHHHHHhCCHH------HHHHHHHHHh
Confidence 9999999999999996 9999999985
No 17
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.81 E-value=1.2e-20 Score=169.26 Aligned_cols=94 Identities=19% Similarity=0.159 Sum_probs=86.1
Q ss_pred ccccCCCeeEEEEEcCEEEEeccceeccCChHHHHhhCCCCCCCcceEEecCCCCCHHHHHHHHHHhhCCceeecCCchh
Q 007644 21 TVISDAPSDLVIQVNNIRYLLHKFPLLPKCGLLQRLCSDPEDSDSVTIELHDIPGGEDAFELCAKFCYGITINLSAHNFV 100 (595)
Q Consensus 21 ~r~~~~l~DVtl~V~g~~F~lHK~vLas~S~YFr~Lf~~~~e~~~~~I~L~d~pGGa~afelll~FcYg~~i~It~~NV~ 100 (595)
.|.++.+|||+|.|+|+.|++||.+|+++|+||++ ....|.|++++ +++|+.+++|+|||++.|+.+||.
T Consensus 24 ~r~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~--------~~~~i~l~~v~--~~~f~~ll~fiYtg~~~i~~~~v~ 93 (119)
T 3m5b_A 24 ARLRPALCDTLITVGSQEFPAHSLVLAGVSQQLGR--------RGQWALGEGIS--PSTFAQLLNFVYGESVELQPGELR 93 (119)
T ss_dssp HHHTTTTCCEEEEETTEEEEECHHHHHTTCGGGCC--------CEEEECCSSCC--HHHHHHHHHHHTTCCEEECGGGHH
T ss_pred HHhcCCCcceEEEECCEEEeeEHHHHHHcCHHHhc--------CCCEEEeCCCC--HHHHHHHHHHHcCCCcCcCHHHHH
Confidence 36789999999999999999999999999999985 24578999998 799999999999999999999999
Q ss_pred hHHHhhcccCcccccccchHHHHHHHHhHH
Q 007644 101 PAFCAAKFLRMAESVEKGNFILKLESFFHS 130 (595)
Q Consensus 101 ~LlcAA~~LqM~e~~~~gNL~~~ce~FL~~ 130 (595)
.|+.||++|||++ |++.|++++.+
T Consensus 94 ~ll~aA~~l~i~~------l~~~C~~~~~~ 117 (119)
T 3m5b_A 94 PLQEAARALGVQS------LEEACWRARGD 117 (119)
T ss_dssp HHHHHHHHTTCHH------HHHHHHHHC--
T ss_pred HHHHHHHHhCCHH------HHHHHHHHHhh
Confidence 9999999999995 99999999875
No 18
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=99.81 E-value=4.5e-21 Score=171.97 Aligned_cols=104 Identities=19% Similarity=0.250 Sum_probs=91.9
Q ss_pred ccccccccCCCeeEEEEEcCEEEEeccceeccCChHHHHhhCCCCCCCcceEEe-cCCCCCHHHHHHHHHHhhCCceeec
Q 007644 17 EATRTVISDAPSDLVIQVNNIRYLLHKFPLLPKCGLLQRLCSDPEDSDSVTIEL-HDIPGGEDAFELCAKFCYGITINLS 95 (595)
Q Consensus 17 ~~~~~r~~~~l~DVtl~V~g~~F~lHK~vLas~S~YFr~Lf~~~~e~~~~~I~L-~d~pGGa~afelll~FcYg~~i~It 95 (595)
+-..++.++.+|||+|.|+|+.|++||.+|+++|+||++||.+... ....|.+ .+++ +++|+.+++|+||+++.++
T Consensus 19 ~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~mf~~~~~-e~~~i~l~~~v~--~~~f~~lL~~iYtg~~~i~ 95 (124)
T 2ihc_A 19 SLNDQRKKDVLCDVTIFVEGQRFRAHRSVLAACSSYFHSRIVGQAD-GELNITLPEEVT--VKGFEPLIQFAYTAKLILS 95 (124)
T ss_dssp HHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTC----CEEEECCTTSC--HHHHHHHHHHHHHSEEEEE
T ss_pred HHHHHHhcCCCcCEEEEECCEEEecHHHHHHHcCHHHHHHHcCCCC-CCceEeecCCcC--HHHHHHHHHHhcCCCcccC
Confidence 3456788999999999999999999999999999999999997532 2357888 4887 7999999999999999999
Q ss_pred CCchhhHHHhhcccCcccccccchHHHHHHHHhH
Q 007644 96 AHNFVPAFCAAKFLRMAESVEKGNFILKLESFFH 129 (595)
Q Consensus 96 ~~NV~~LlcAA~~LqM~e~~~~gNL~~~ce~FL~ 129 (595)
.+||..|+.||++|||++ |++.|++||.
T Consensus 96 ~~~v~~ll~~A~~~~~~~------L~~~C~~~l~ 123 (124)
T 2ihc_A 96 KENVDEVCKCVEFLSVHN------IEESCFQFLK 123 (124)
T ss_dssp TTTHHHHHHHHHHHTBSS------CCGGGGGTC-
T ss_pred HHHHHHHHHHHHHHCCHH------HHHHHHHHHh
Confidence 999999999999999996 8889999885
No 19
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=99.78 E-value=1.7e-19 Score=184.25 Aligned_cols=124 Identities=13% Similarity=0.123 Sum_probs=110.8
Q ss_pred cccccccCCCeeEEEEEcCEEEEeccceeccCChHHHHhhCCC-CCCCcceEEecCCCCCHHHHHHHHHHhhCCceeecC
Q 007644 18 ATRTVISDAPSDLVIQVNNIRYLLHKFPLLPKCGLLQRLCSDP-EDSDSVTIELHDIPGGEDAFELCAKFCYGITINLSA 96 (595)
Q Consensus 18 ~~~~r~~~~l~DVtl~V~g~~F~lHK~vLas~S~YFr~Lf~~~-~e~~~~~I~L~d~pGGa~afelll~FcYg~~i~It~ 96 (595)
-..++.++.+|||+|.|+|++|++||.+||++|+||++||.+. .|+...+|.|+|++ +++|+.+++|+||+++.++.
T Consensus 165 l~~l~~~~~~~Dv~l~v~~~~f~~Hk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~--~~~f~~~L~~iYt~~~~~~~ 242 (312)
T 3hqi_A 165 LGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVE--PEVFKEMMCFIYTGKAPNLD 242 (312)
T ss_dssp HHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHTTC-----CCSEEEECSSC--HHHHHHHHHHHHHSCCTTHH
T ss_pred HHHHHhCCCCCceEEEECCEEEeHHHHHHHHcCHHHHHHhccCccccCCceEEecCCC--HHHHHHHHHhhcCCCCCChH
Confidence 3446678999999999999999999999999999999999975 57777899999998 79999999999999999999
Q ss_pred CchhhHHHhhcccCcccccccchHHHHHHHHhHHhhhcchhhHHHHHhhhhhHHHHHHhcCc
Q 007644 97 HNFVPAFCAAKFLRMAESVEKGNFILKLESFFHSCILEGWKDSIVTLKTTNKLSEWSENLGI 158 (595)
Q Consensus 97 ~NV~~LlcAA~~LqM~e~~~~gNL~~~ce~FL~~~v~~sw~dsl~~L~~C~~L~~~Ae~~~i 158 (595)
.|+..|+.||++++|+. |+..|+.||.+.+ ...||..++.+|+.+++
T Consensus 243 ~~~~~ll~~A~~~~~~~------l~~~c~~~l~~~~---------~~~n~~~~l~~A~~~~~ 289 (312)
T 3hqi_A 243 KMADDLLAAADKYALER------LKVMCEDALCSNL---------SVENAAEILILADLHSA 289 (312)
T ss_dssp HHHHHHHHHHHHTTCHH------HHHHHHHHHHTTC---------CTTTHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhCHHH------HHHHHHHHHHccC---------CHHHHHHHHHHHHHhCC
Confidence 99999999999999995 9999999999888 44699999999999876
No 20
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=99.74 E-value=6.4e-19 Score=156.75 Aligned_cols=90 Identities=16% Similarity=0.169 Sum_probs=83.7
Q ss_pred cccccccCCCeeEEEEEcCEEEEeccceeccCChHHHHhhCCCCCCCcceEEecCCCCCHHHHHHHHHHhhCCce-eecC
Q 007644 18 ATRTVISDAPSDLVIQVNNIRYLLHKFPLLPKCGLLQRLCSDPEDSDSVTIELHDIPGGEDAFELCAKFCYGITI-NLSA 96 (595)
Q Consensus 18 ~~~~r~~~~l~DVtl~V~g~~F~lHK~vLas~S~YFr~Lf~~~~e~~~~~I~L~d~pGGa~afelll~FcYg~~i-~It~ 96 (595)
-..++.++.+|||+|.|+|+.|++||.+|+++|+||++||.+. ...|.|++++ +++|+.+++|+||+++ .++.
T Consensus 22 l~~~~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~~F~~~f~~~----~~~i~l~~~~--~~~f~~~l~~~Ytg~~~~~~~ 95 (116)
T 3fkc_A 22 LNEQRGHGLFCDVTVIVEDRKFRAHKNILSASSTYFHQLFSVA----GQVVELSFIR--AEIFAEILNYIYSSKIVRVRS 95 (116)
T ss_dssp HHHHHHHTTTCCEEEEETTEEEEECHHHHHHHCHHHHHHTTSC----CSEEEECSSC--HHHHHHHHHHHTTSCCCSCCH
T ss_pred HHHHHhcCCceeEEEEECCEEEehhHHHHHHcCHHHHHHHcCC----CCEEEeCCCC--HHHHHHHHHhhcCCCcCCCCH
Confidence 4457889999999999999999999999999999999999864 4589999998 7999999999999999 7999
Q ss_pred CchhhHHHhhcccCccc
Q 007644 97 HNFVPAFCAAKFLRMAE 113 (595)
Q Consensus 97 ~NV~~LlcAA~~LqM~e 113 (595)
+|+..++.||++|||+.
T Consensus 96 ~~~~~ll~~A~~l~i~~ 112 (116)
T 3fkc_A 96 DLLDELIKSGQLLGVKF 112 (116)
T ss_dssp HHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHHhCccc
Confidence 99999999999999985
No 21
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=99.40 E-value=1.4e-13 Score=129.57 Aligned_cols=112 Identities=11% Similarity=0.183 Sum_probs=91.2
Q ss_pred EEEEE-cCEEEEeccceeccCChHHHHhhCC-C-C-CCCcceEEecCCCCCHHHHHHHHHHhhCCc--------------
Q 007644 30 LVIQV-NNIRYLLHKFPLLPKCGLLQRLCSD-P-E-DSDSVTIELHDIPGGEDAFELCAKFCYGIT-------------- 91 (595)
Q Consensus 30 Vtl~V-~g~~F~lHK~vLas~S~YFr~Lf~~-~-~-e~~~~~I~L~d~pGGa~afelll~FcYg~~-------------- 91 (595)
|+|.. +|+.|.+||.+ |+.|+||++||.+ + . ++....|.|++++ +.+++.|++|||..+
T Consensus 3 v~L~ssDg~~f~v~~~v-A~~S~~i~~m~~~~~~~~e~~~~~Ipl~~V~--~~iL~kViey~~~h~~~~~~~~~~~~~~~ 79 (159)
T 2ast_A 3 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLGMDDEGDDDPVPLPNVN--AAILKKVIQWCTHHKDDPPPPEDDENKEK 79 (159)
T ss_dssp EEEECTTSCEEEEEHHH-HHTCHHHHHHTTSSCSS------CEECTTSC--HHHHHHHHHHHHHTTTCCC----------
T ss_pred EEEEcCCCCEEEeCHHH-HHHhHHHHHHHHhcCCcccccCCCcCCCCcc--HHHHHHHHHHHHHcCcCCCCccccccccc
Confidence 77775 78999999998 9999999999997 3 3 4555689999999 599999999999877
Q ss_pred ------------eeecCCchhhHHHhhcccCcccccccchHHHHHHHHhHHhhhcchhhHHHHHhhhhhHHHHHHhcCcc
Q 007644 92 ------------INLSAHNFVPAFCAAKFLRMAESVEKGNFILKLESFFHSCILEGWKDSIVTLKTTNKLSEWSENLGII 159 (595)
Q Consensus 92 ------------i~It~~NV~~LlcAA~~LqM~e~~~~gNL~~~ce~FL~~~v~~sw~dsl~~L~~C~~L~~~Ae~~~iv 159 (595)
+.++..|+..|+.||+||+|.. |++.|+.|+..++.. ++++.+.. .++|.
T Consensus 80 ~~~~i~~wD~~F~~id~~~l~eLl~AAnyL~I~~------Lld~~c~~va~~i~g---------kt~eeir~---~f~I~ 141 (159)
T 2ast_A 80 RTDDIPVWDQEFLKVDQGTLFELILAANYLDIKG------LLDVTCKTVANMIKG---------KTPEEIRK---TFNIK 141 (159)
T ss_dssp -CCCCCHHHHHHTCSCHHHHHHHHHHHHHHTCHH------HHHHHHHHHHHHHSS---------CCHHHHHH---HTTCC
T ss_pred chhhhhHHHHHHHcCCHHHHHHHHHHHHHHhHHH------HHHHHHHHHHHHHcC---------CCHHHHHH---HcCCC
Confidence 8899999999999999999995 999999999998843 46666554 45665
Q ss_pred ccc
Q 007644 160 RRC 162 (595)
Q Consensus 160 ~rc 162 (595)
..+
T Consensus 142 ~d~ 144 (159)
T 2ast_A 142 NDF 144 (159)
T ss_dssp CCS
T ss_pred CCC
Confidence 443
No 22
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=99.18 E-value=2e-11 Score=105.91 Aligned_cols=79 Identities=13% Similarity=0.304 Sum_probs=65.8
Q ss_pred EEEEE-cCEEEEeccceeccCChHHHHhhCCC---CCCCcceEEecCCCCCHHHHHHHHHHhh-----C---Ccee---e
Q 007644 30 LVIQV-NNIRYLLHKFPLLPKCGLLQRLCSDP---EDSDSVTIELHDIPGGEDAFELCAKFCY-----G---ITIN---L 94 (595)
Q Consensus 30 Vtl~V-~g~~F~lHK~vLas~S~YFr~Lf~~~---~e~~~~~I~L~d~pGGa~afelll~FcY-----g---~~i~---I 94 (595)
|+|+- +|+.|.+||.+ |+.|+||++||.+. .|+....|.|++++ +.+++.+++||| + +.+. |
T Consensus 4 v~L~SsDg~~F~v~r~v-A~~S~~ik~m~~~~~~~~E~~~~~I~l~~V~--~~iL~kViey~~~h~~~~~~~~~i~~~~i 80 (97)
T 4ajy_C 4 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIP--SHVLSKVCMYFTYKVRYTNSSTEIPEFPI 80 (97)
T ss_dssp EEEECTTCCEEEEEHHH-HTTSHHHHHHHCCC--------CEEECTTSC--HHHHHHHHHHHHHHHHHTTCCSCCCCCCC
T ss_pred EEEEecCCcEEEecHHH-HHHhHHHHHHHHhCCCccccCCCceECCCCC--HHHHHHHHHHHHHhcccCCCcCCCCcCcC
Confidence 55654 68999999999 99999999999962 35556789999999 599999999999 5 6777 9
Q ss_pred cCCchhhHHHhhcccCc
Q 007644 95 SAHNFVPAFCAAKFLRM 111 (595)
Q Consensus 95 t~~NV~~LlcAA~~LqM 111 (595)
+++|+..|+.||+||+.
T Consensus 81 ~~~~l~eLl~AAnyL~~ 97 (97)
T 4ajy_C 81 APEIALELLMAANFLDC 97 (97)
T ss_dssp CGGGHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHhhhCC
Confidence 99999999999999973
No 23
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=99.07 E-value=8.7e-11 Score=108.62 Aligned_cols=92 Identities=9% Similarity=0.119 Sum_probs=81.3
Q ss_pred EEEEE-cCEEEEeccceeccCChHHHHhhCCCCCCCcceEEecCCCCCHHHHHHHHHHhhCCc-----------------
Q 007644 30 LVIQV-NNIRYLLHKFPLLPKCGLLQRLCSDPEDSDSVTIELHDIPGGEDAFELCAKFCYGIT----------------- 91 (595)
Q Consensus 30 Vtl~V-~g~~F~lHK~vLas~S~YFr~Lf~~~~e~~~~~I~L~d~pGGa~afelll~FcYg~~----------------- 91 (595)
|+|+. +|+.|.+|+.+ |..|+||+.||.+.. ...|.|++++ +.+++.+++|||..+
T Consensus 4 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~---~~~Ipl~~V~--~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~ 77 (141)
T 1fs1_B 4 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLG---MDPVPLPNVN--AAILKKVIQWCTHHKDDPPPPEDDENKEKRTD 77 (141)
T ss_dssp EEEECTTSCEEEEEGGG-GGTCHHHHHHHHHTC---CSSEECTTCC--HHHHHHHHHHHHHHTTCC--------------
T ss_pred EEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcC---CCceecCCcC--HHHHHHHHHHHHHhccCCCccccccccccchh
Confidence 67776 77999999998 899999999998632 3479999999 599999999999654
Q ss_pred ---------eeecCCchhhHHHhhcccCcccccccchHHHHHHHHhHHhhh
Q 007644 92 ---------INLSAHNFVPAFCAAKFLRMAESVEKGNFILKLESFFHSCIL 133 (595)
Q Consensus 92 ---------i~It~~NV~~LlcAA~~LqM~e~~~~gNL~~~ce~FL~~~v~ 133 (595)
+.++..++..|+.||+||+|.. |++.|+.|+...+-
T Consensus 78 ~i~~wD~~F~~vd~~~l~eLi~AAnyL~I~~------Lldl~c~~vA~~ik 122 (141)
T 1fs1_B 78 DIPVWDQEFLKVDQGTLFELILAANYLDIKG------LLDVTCKTVANMIK 122 (141)
T ss_dssp ---HHHHHHTCSCHHHHHHHHHHHHHHTCHH------HHHHHHHHHHHHHT
T ss_pred hhhHHHHHHHhCCHHHHHHHHHHHHHHhhhH------HHHHHHHHHHHHHc
Confidence 6788999999999999999995 99999999999873
No 24
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=98.94 E-value=1.2e-10 Score=109.82 Aligned_cols=93 Identities=9% Similarity=0.172 Sum_probs=51.8
Q ss_pred EEEEE-cCEEEEeccceeccCChHHHHhhCCCCCCCcceEEecCCCCCHHHHHHHHHHhhCCc-----------------
Q 007644 30 LVIQV-NNIRYLLHKFPLLPKCGLLQRLCSDPEDSDSVTIELHDIPGGEDAFELCAKFCYGIT----------------- 91 (595)
Q Consensus 30 Vtl~V-~g~~F~lHK~vLas~S~YFr~Lf~~~~e~~~~~I~L~d~pGGa~afelll~FcYg~~----------------- 91 (595)
|+|+. +|+.|.+|+.+ |..|+||+.||.+.. ....|.|++|+ +.+++.|++|||..+
T Consensus 6 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~--~~~~Ipl~~V~--~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~ 80 (160)
T 2p1m_A 6 IVLKSSDGESFEVEEAV-ALESQTIAHMVEDDC--VDNGVPLPNVT--SKILAKVIEYCKRHVEAAASKAEAVEGAATSD 80 (160)
T ss_dssp --CCC---------CHH-HHTCTTTC--------------CCTTSC--HHHHHHHHHC----------------------
T ss_pred EEEEcCCCCEEEECHHH-HHHhHHHHHHHHccC--CCCceeCCcCc--HHHHHHHHHHHHHcccCCCccccccccccccc
Confidence 66664 78999999998 899999999998642 23478999999 599999999999865
Q ss_pred ----------eeecCCchhhHHHhhcccCcccccccchHHHHHHHHhHHhhh
Q 007644 92 ----------INLSAHNFVPAFCAAKFLRMAESVEKGNFILKLESFFHSCIL 133 (595)
Q Consensus 92 ----------i~It~~NV~~LlcAA~~LqM~e~~~~gNL~~~ce~FL~~~v~ 133 (595)
+.++..++..|+.||+||+|.. |++.|+.|+...+-
T Consensus 81 ~~i~~wD~~Fl~vd~~~l~eLi~AAnyL~I~~------Lldl~c~~vA~~ik 126 (160)
T 2p1m_A 81 DDLKAWDADFMKIDQATLFELILAANYLNIKN------LLDLTCQTVADMIK 126 (160)
T ss_dssp --------------------CHHHHHHTTCHH------HHHHHHHHHHHTTT
T ss_pred chhhHHHHHHHcCCHHHHHHHHHHHHHHhHHH------HHHHHHHHHHHHHc
Confidence 5789999999999999999995 99999999999883
No 25
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=98.32 E-value=4.5e-07 Score=79.06 Aligned_cols=79 Identities=13% Similarity=0.182 Sum_probs=65.7
Q ss_pred EEEEE-cCEEEEeccceeccCChHHHHhhCCCCCCCcceEEecCCCCCHHHHHHHHHHhhCCc--------------eee
Q 007644 30 LVIQV-NNIRYLLHKFPLLPKCGLLQRLCSDPEDSDSVTIELHDIPGGEDAFELCAKFCYGIT--------------INL 94 (595)
Q Consensus 30 Vtl~V-~g~~F~lHK~vLas~S~YFr~Lf~~~~e~~~~~I~L~d~pGGa~afelll~FcYg~~--------------i~I 94 (595)
|+|.- +|+.|.+|+.+ |..|++++.|+.++-+.....|.|++++ +.+++.+++|||.-+ ..+
T Consensus 6 v~L~SsDg~~f~V~~~v-A~~S~~ik~ml~~~~e~~~~~Iplp~V~--~~iL~kVieyc~~h~~~~~~~~~~~~i~~w~v 82 (99)
T 1hv2_A 6 VTLVSKDDKEYEISRSA-AMISPTLKAMIEGPFRESKGRIELKQFD--SHILEKAVEYLNYNLKYSGVSEDDDEIPEFEI 82 (99)
T ss_dssp EEEEETTTEEEEEEHHH-HTTCHHHHHHHHSSTTTCTTEEEETTSC--HHHHHHHHHHHHHHHHHHHHCSSCSSCCCCCC
T ss_pred EEEEecCCCEEEECHHH-HHHhHHHHHHHhcccccCCCceecCCcC--HHHHHHHHHHHHHhcccCCCccccccCCCccC
Confidence 67776 88999999996 9999999999986433344689999999 599999999999532 356
Q ss_pred cCCchhhHHHhhcccCc
Q 007644 95 SAHNFVPAFCAAKFLRM 111 (595)
Q Consensus 95 t~~NV~~LlcAA~~LqM 111 (595)
...++..|+.||+||++
T Consensus 83 d~~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 83 PTEMSLELLLAADYLSI 99 (99)
T ss_dssp CHHHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHHHhCc
Confidence 77788899999999985
No 26
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=98.31 E-value=4.7e-07 Score=78.47 Aligned_cols=79 Identities=11% Similarity=0.274 Sum_probs=64.1
Q ss_pred EEEEE-cCEEEEeccceeccCChHHHHhhCCC---CCCCcceEEecCCCCCHHHHHHHHHHhhCCc-----------eee
Q 007644 30 LVIQV-NNIRYLLHKFPLLPKCGLLQRLCSDP---EDSDSVTIELHDIPGGEDAFELCAKFCYGIT-----------INL 94 (595)
Q Consensus 30 Vtl~V-~g~~F~lHK~vLas~S~YFr~Lf~~~---~e~~~~~I~L~d~pGGa~afelll~FcYg~~-----------i~I 94 (595)
|+|.. +|+.|.+|+.+ |..|++|+.|+.+. .|.....|.|++++ +.+++.+++|||.-. ..+
T Consensus 3 v~L~SsDg~~f~V~~~~-A~~S~~ik~ml~~~~~~~e~~~~~Ipl~~V~--~~iL~kVieyc~~h~~~~~~~~~i~~w~v 79 (96)
T 2fnj_C 3 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIP--SHVLSKVCMYFTYKVRYTNSSTEIPEFPI 79 (96)
T ss_dssp EEEECTTSCEEEEEHHH-HTTSHHHHHHHHCC--------CEEECSSCC--HHHHHHHHHHHHHHHHHHSCCSCCCCCCC
T ss_pred EEEEecCCCEEEeCHHH-HHHhHHHHHHHHccCCcccccCCceeCCCCC--HHHHHHHHHHHHHccccCCCcccCCCccc
Confidence 56665 78999999996 89999999999863 24444689999999 599999999999532 368
Q ss_pred cCCchhhHHHhhcccCc
Q 007644 95 SAHNFVPAFCAAKFLRM 111 (595)
Q Consensus 95 t~~NV~~LlcAA~~LqM 111 (595)
...++..|+.||+||++
T Consensus 80 d~~~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 80 APEIALELLMAANFLDC 96 (96)
T ss_dssp CTTTHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHhCc
Confidence 88999999999999985
No 27
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=98.23 E-value=9.6e-07 Score=84.03 Aligned_cols=95 Identities=13% Similarity=0.205 Sum_probs=76.1
Q ss_pred eEEEEE-cCEEEEeccceeccCChHHHHhhCCCCC-----CCcceEEecCCCCCHHHHHHHHHHhhCCc-----------
Q 007644 29 DLVIQV-NNIRYLLHKFPLLPKCGLLQRLCSDPED-----SDSVTIELHDIPGGEDAFELCAKFCYGIT----------- 91 (595)
Q Consensus 29 DVtl~V-~g~~F~lHK~vLas~S~YFr~Lf~~~~e-----~~~~~I~L~d~pGGa~afelll~FcYg~~----------- 91 (595)
-|+|+- +|+.|.+++.+ |..|++++.|+..... .....|.|++|+ +.+++.|+.|||--+
T Consensus 8 ~i~L~SsDG~~F~V~~~v-A~~S~tIk~ml~~~~~~~~~~~~~~~IplpnV~--s~iL~kVieyc~~h~~~~~~~~~~~~ 84 (169)
T 3v7d_A 8 NVVLVSGEGERFTVDKKI-AERSLLLKNYLNDMGDDDDEDDDEIVMPVPNVR--SSVLQKVIEWAEHHRDSNFPDEDDDD 84 (169)
T ss_dssp EEEEECTTCCEEEEEHHH-HTTSHHHHHHHHC-----------CEEECTTCC--HHHHHHHHHHHHHTTTCCCCC-----
T ss_pred eEEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcCcccccccCCCceeeCCCC--HHHHHHHHHHHHHcccCCCccccccc
Confidence 466765 67999999997 8889999999986421 223679999999 599999999999422
Q ss_pred --------------eeecCCchhhHHHhhcccCcccccccchHHHHHHHHhHHhh
Q 007644 92 --------------INLSAHNFVPAFCAAKFLRMAESVEKGNFILKLESFFHSCI 132 (595)
Q Consensus 92 --------------i~It~~NV~~LlcAA~~LqM~e~~~~gNL~~~ce~FL~~~v 132 (595)
+.+....+..|+.||+||+|.. |++.||.++...+
T Consensus 85 ~~~~~~i~~wD~~Fl~vd~~~LfeLi~AAnyLdIk~------Lldl~c~~vA~~i 133 (169)
T 3v7d_A 85 SRKSAPVDSWDREFLKVDQEMLYEIILAANYLNIKP------LLDAGCKVVAEMI 133 (169)
T ss_dssp ---CCCCCHHHHHHTCSCHHHHHHHHHHHHHTTCHH------HHHHHHHHHHHHH
T ss_pred ccccccccHHHHHHHcCCHHHHHHHHHHHHHhCcHH------HHHHHHHHHHHHH
Confidence 3466677889999999999995 9999999998876
No 28
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=97.60 E-value=2.8e-05 Score=69.37 Aligned_cols=79 Identities=11% Similarity=0.270 Sum_probs=62.5
Q ss_pred EEEE-EcCEEEEeccceeccCChHHHHhhCCC---CCCCcceEEecCCCCCHHHHHHHHHHhhCCc-----------eee
Q 007644 30 LVIQ-VNNIRYLLHKFPLLPKCGLLQRLCSDP---EDSDSVTIELHDIPGGEDAFELCAKFCYGIT-----------INL 94 (595)
Q Consensus 30 Vtl~-V~g~~F~lHK~vLas~S~YFr~Lf~~~---~e~~~~~I~L~d~pGGa~afelll~FcYg~~-----------i~I 94 (595)
|+|+ .+|+.|.+++. .|..|+.++.|+.+. .+.....|.|++|+ +.+++.|++|||--+ ..+
T Consensus 19 v~L~SsDG~~F~V~~~-~A~~S~tIk~ml~~~~~~~e~~~~~IplpnV~--s~iL~kVieyc~~h~~~~~~~~~i~~w~v 95 (112)
T 1vcb_B 19 VKLISSDGHEFIVKRE-HALTSGTIKAMLSGPGQFAENETNEVNFREIP--SHVLSKVCMYFTYKVRYTNSSTEIPEFPI 95 (112)
T ss_dssp EEEECTTSCEEEEEHH-HHHTSHHHHHHSSCC--------CEEECSSCC--HHHHHHHHHHHHHHHHHSSCSSCCCCCCC
T ss_pred EEEEcCCCCEEEECHH-HHHHhHHHHHHHHhcCCcccccCCceeCCCCC--HHHHHHHHHHHHHhhhccCCcCCCCCccc
Confidence 6666 47899999999 588999999999863 23334589999999 599999999998432 357
Q ss_pred cCCchhhHHHhhcccCc
Q 007644 95 SAHNFVPAFCAAKFLRM 111 (595)
Q Consensus 95 t~~NV~~LlcAA~~LqM 111 (595)
...++..|+.||+||++
T Consensus 96 d~~~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 96 APEIALELLMAANFLDC 112 (112)
T ss_dssp CHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHhCc
Confidence 77888999999999985
No 29
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=97.36 E-value=0.00034 Score=61.48 Aligned_cols=92 Identities=14% Similarity=0.166 Sum_probs=70.5
Q ss_pred eEEEEEcCEEEEeccceeccCC-hHHHHhhCCCCC----C-CcceEEecCCCCCHHHHHHHHHHhhCCceeecC-Cchhh
Q 007644 29 DLVIQVNNIRYLLHKFPLLPKC-GLLQRLCSDPED----S-DSVTIELHDIPGGEDAFELCAKFCYGITINLSA-HNFVP 101 (595)
Q Consensus 29 DVtl~V~g~~F~lHK~vLas~S-~YFr~Lf~~~~e----~-~~~~I~L~d~pGGa~afelll~FcYg~~i~It~-~NV~~ 101 (595)
=|+|.|||+.|...+..|.... .+|.+||.+..+ . ...++-| |-+ |+.|+.|++|..+|++.+.. -.+..
T Consensus 7 ~v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~d~~~~~fi-DRd--p~~F~~IL~~lr~g~l~~p~~~~~~~ 83 (107)
T 3drz_A 7 WVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DRD--PTYFGPVLNYLRHGKLVINKDLAEEG 83 (107)
T ss_dssp EEEEEETTEEEEEEHHHHTSSTTSHHHHHHTTCGGGGGGBCTTSCEEE-CSC--HHHHHHHHHHHHHSCCCCCTTSCHHH
T ss_pred EEEEEECCEEEEECHHHHhcCCCcchhHHHhcCCCCCcCCCCCceEEe-cCC--hHHHHHHHHHhCCCeeCCCCCCCHHH
Confidence 3788999999999999999886 578999975311 1 2234544 444 69999999999999988743 23467
Q ss_pred HHHhhcccCcccccccchHHHHHHHHhH
Q 007644 102 AFCAAKFLRMAESVEKGNFILKLESFFH 129 (595)
Q Consensus 102 LlcAA~~LqM~e~~~~gNL~~~ce~FL~ 129 (595)
++..|+|.++++ |++.|++-+.
T Consensus 84 l~~Ea~fy~l~~------L~~~l~~~i~ 105 (107)
T 3drz_A 84 VLEEAEFYNITS------LIKLVKDKIR 105 (107)
T ss_dssp HHHHHHHHTCHH------HHHHHHHHHH
T ss_pred HHHHHHHCCCHH------HHHHHHHHHh
Confidence 999999999996 8888876554
No 30
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=95.57 E-value=0.025 Score=55.37 Aligned_cols=93 Identities=14% Similarity=0.165 Sum_probs=70.1
Q ss_pred eEEEEEcCEEEEeccceeccCC-hHHHHhhCCCCC----C-CcceEEecCCCCCHHHHHHHHHHhhCCceeecC-Cchhh
Q 007644 29 DLVIQVNNIRYLLHKFPLLPKC-GLLQRLCSDPED----S-DSVTIELHDIPGGEDAFELCAKFCYGITINLSA-HNFVP 101 (595)
Q Consensus 29 DVtl~V~g~~F~lHK~vLas~S-~YFr~Lf~~~~e----~-~~~~I~L~d~pGGa~afelll~FcYg~~i~It~-~NV~~ 101 (595)
=|+|.|||+.|..-+..|.... .+|.+||.+..+ . ....+-| |-. |..|+.|++|.-+|++.+.. -.+..
T Consensus 13 ~V~LNVGG~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~~~~De~geyFI-DRD--P~~F~~ILnyLRtG~L~lP~~~~~~~ 89 (202)
T 3drx_A 13 WVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DRD--PTYFGPVLNYLRHGKLVINKDLAEEG 89 (202)
T ss_dssp EEEEEETTEEEEEETTGGGSCTTSSTHHHHSCCCC----BCTTCCEEE-CSC--STTHHHHHHHHHHSCCCCCTTSCHHH
T ss_pred EEEEEECCEEEEEeHHHHhCCCcchHHHHhcCccccCcccCCCccEEe-cCC--hHHHHHHHHHhcCCccCCCCCCCHHH
Confidence 3678999999999999998875 488999875321 1 1234544 334 48999999999999988733 23356
Q ss_pred HHHhhcccCcccccccchHHHHHHHHhHH
Q 007644 102 AFCAAKFLRMAESVEKGNFILKLESFFHS 130 (595)
Q Consensus 102 LlcAA~~LqM~e~~~~gNL~~~ce~FL~~ 130 (595)
++.-|+|+++.+ |++.|..-+.+
T Consensus 90 l~eEA~FygL~~------Lv~~l~~~i~e 112 (202)
T 3drx_A 90 VLEEAEFYNITS------LIKLVKDKIRE 112 (202)
T ss_dssp HHHHHHHTTCHH------HHHHHHHHHHH
T ss_pred HHHHHHHCCcHH------HHHHHHHHHHH
Confidence 999999999996 88888777754
No 31
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.31 E-value=0.0054 Score=53.23 Aligned_cols=71 Identities=11% Similarity=0.011 Sum_probs=53.8
Q ss_pred HHhhhhhHHHHHHhcCccccchHHHHHHHhcCCCcccccccccCCCcccccccCCCCCceecccccCCHHHHHHHHHHHH
Q 007644 142 TLKTTNKLSEWSENLGIIRRCIDSIVEKILTPISKVSWSYTYTRPGYTQKRHQIAPKDWWTEDISELDIELFRCIVTAVR 221 (595)
Q Consensus 142 ~L~~C~~L~~~Ae~~~iv~rcidsLa~ka~~~~~~~~~s~~~~~~~~~~~~~~~~~~~WW~EDl~~L~~d~f~rvI~am~ 221 (595)
...||.+++.+|+.|++ ..|..++. .|.. .++......++|..||.+.+..+|..
T Consensus 9 ~~~NCl~i~~~A~~~~~-----~~L~~~a~--------~fi~----------~nF~~v~~~~eFl~L~~~~L~~lL~s-- 63 (105)
T 2eqx_A 9 QVGNCLQVMWLADRHSD-----PELYTAAK--------HCAK----------THLAQLQNTEEFLHLPHRLLTDIISD-- 63 (105)
T ss_dssp CTTTHHHHHHHHHHTTC-----HHHHHHHH--------HHHH----------HTCHHHHTSHHHHHSCHHHHHHHHHT--
T ss_pred CHHHHHHHHHHHHHcCC-----HHHHHHHH--------HHHH----------HHHHHHHhcccHhhCCHHHHHHHHcC--
Confidence 34699999999999998 67777654 1220 22334455689999999999999944
Q ss_pred hcCCCChhhHHHHHHHHH
Q 007644 222 STYMLPPQLIGEALHVYA 239 (595)
Q Consensus 222 s~g~~~ee~V~~aL~~Ya 239 (595)
+ ..+|+.|++|+++|+
T Consensus 64 -d-v~~E~~vf~av~~Wv 79 (105)
T 2eqx_A 64 -G-VPCSQNPTEAIEAWI 79 (105)
T ss_dssp -C-EETTSCHHHHHHHHH
T ss_pred -C-CCCHHHHHHHHHHHH
Confidence 3 367889999999998
No 32
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=94.64 E-value=0.014 Score=52.09 Aligned_cols=82 Identities=15% Similarity=0.016 Sum_probs=61.2
Q ss_pred EEEEEcCEEEEeccceeccCCh-HHHHhhCCCC--CCCcceEEecCCCCCHHHHHHHHHHhhCCceeecC-CchhhHHHh
Q 007644 30 LVIQVNNIRYLLHKFPLLPKCG-LLQRLCSDPE--DSDSVTIELHDIPGGEDAFELCAKFCYGITINLSA-HNFVPAFCA 105 (595)
Q Consensus 30 Vtl~V~g~~F~lHK~vLas~S~-YFr~Lf~~~~--e~~~~~I~L~d~pGGa~afelll~FcYg~~i~It~-~NV~~LlcA 105 (595)
|+|.|||+.|...+..|....+ .|.+||.... .....++-|. =. |..|..|++|.-+|++.+.. ..+..++.-
T Consensus 7 V~LNVGG~~f~T~~~TL~~~P~s~L~~l~~~~~~~~~~~g~~FiD-Rd--p~~F~~ILnylR~G~l~~p~~~~~~~~~~E 83 (115)
T 3kvt_A 7 VIINVGGIRHETYKATLKKIPATRLSRLTEGMLNYDPVLNEYFFD-RH--PGVFAQIINYYRSGKLHYPTDVCGPLFEEE 83 (115)
T ss_dssp EEEEETTEEEEEEHHHHTTSCSSTTTTCCTTSTTEETTTTEEEEC-SC--TTTHHHHHHHHHHSCBCCCSSSCHHHHHHH
T ss_pred EEEEECCEEEEecHHHHhcCCCccHHHHhcCCCCCCCCCCcEEEe-cC--hHHHHHHHHHhcCCCCCCCCcccHHHHHHH
Confidence 7889999999999999987643 4666776421 1223455553 33 48999999999999987754 346779999
Q ss_pred hcccCcccc
Q 007644 106 AKFLRMAES 114 (595)
Q Consensus 106 A~~LqM~e~ 114 (595)
|+|.++++.
T Consensus 84 a~fy~i~~~ 92 (115)
T 3kvt_A 84 LEFWGLDSN 92 (115)
T ss_dssp HHHHTCCGG
T ss_pred HHHhCCChH
Confidence 999999973
No 33
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=91.54 E-value=0.19 Score=43.62 Aligned_cols=81 Identities=16% Similarity=0.060 Sum_probs=56.6
Q ss_pred EEEEEcCEEEEeccceeccCC-hHHHHhhCCC--CCCCcceEEecCCCCCHHHHHHHHHHhhC-CceeecC-CchhhHHH
Q 007644 30 LVIQVNNIRYLLHKFPLLPKC-GLLQRLCSDP--EDSDSVTIELHDIPGGEDAFELCAKFCYG-ITINLSA-HNFVPAFC 104 (595)
Q Consensus 30 Vtl~V~g~~F~lHK~vLas~S-~YFr~Lf~~~--~e~~~~~I~L~d~pGGa~afelll~FcYg-~~i~It~-~NV~~Llc 104 (595)
|+|.|||+.|...+..|...- ..+.+|+... .+....++-+. =. +..|+.|++|.-+ |++.+.+ ..+..++.
T Consensus 3 v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~~eyFiD-Rd--p~~F~~ILnflR~~G~l~~p~~~~~~~~~~ 79 (100)
T 1t1d_A 3 VVINVSGLRFETQLKTLNQFPDTLLGNPQKRNRYYDPLRNEYFFD-RN--RPSFDAILYFYQSGGRLRRPVNVPLDVFSE 79 (100)
T ss_dssp EEEEETTEEEEEEHHHHHTSTTSTTTCHHHHGGGEETTTTEEEEC-SC--STTHHHHHHHHHTTSCCCCCTTSCHHHHHH
T ss_pred EEEEECCEEEEeeHHHHhcCCCccccchhccccccCCCceeEEEc-CC--hHHHHHHHHHHhcCCcccCCCCCCHHHHHH
Confidence 789999999999999886552 2344454321 11123455553 33 4899999999998 8886632 24567999
Q ss_pred hhcccCccc
Q 007644 105 AAKFLRMAE 113 (595)
Q Consensus 105 AA~~LqM~e 113 (595)
-|+|.++.+
T Consensus 80 Ea~fy~i~~ 88 (100)
T 1t1d_A 80 EIKFYELGE 88 (100)
T ss_dssp HHHHTTCCH
T ss_pred HHHHcCCCH
Confidence 999999997
No 34
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=90.71 E-value=0.14 Score=46.13 Aligned_cols=79 Identities=13% Similarity=0.104 Sum_probs=55.9
Q ss_pred eEEEEEcCEEEEeccceeccCChHHHHhhCCC-C----CCCcceEEecCCCCCHHHHHHHHHHhhCCceeecC-CchhhH
Q 007644 29 DLVIQVNNIRYLLHKFPLLPKCGLLQRLCSDP-E----DSDSVTIELHDIPGGEDAFELCAKFCYGITINLSA-HNFVPA 102 (595)
Q Consensus 29 DVtl~V~g~~F~lHK~vLas~S~YFr~Lf~~~-~----e~~~~~I~L~d~pGGa~afelll~FcYg~~i~It~-~NV~~L 102 (595)
=|+|.|||+.|..-+..|...-+- |+... + ......+-| |=+ +..|+.|++|.-+|++.+.. ..+..+
T Consensus 14 ~V~LNVGG~~F~t~~~TL~~~p~S---~L~~~~~~~~~~~~~g~~Fi-DRd--p~~F~~ILnflR~G~l~~p~~~~~~~l 87 (124)
T 1s1g_A 14 LIVLNVSGRRFQTWRTTLERYPDT---LLGSTEKEFFFNEDTKEYFF-DRD--PEVFRCVLNFYRTGKLHYPRYECISAY 87 (124)
T ss_dssp EEEEEETTEEEEEEHHHHTTSTTS---STTSSGGGGTBCSSSCSEEE-CSC--HHHHHHHHHHHHHSCBCCCTTSCHHHH
T ss_pred EEEEEeCCEEEEEeHHHHhcCCCc---eecccCCcccccCCCCcEEE-cCC--hHHHHHHHHHHhcCCCCCCCCcCHHHH
Confidence 478899999999999888765321 23221 1 112234444 333 69999999999999987643 246779
Q ss_pred HHhhcccCccc
Q 007644 103 FCAAKFLRMAE 113 (595)
Q Consensus 103 lcAA~~LqM~e 113 (595)
+.-|+|.++++
T Consensus 88 ~~Ea~fy~i~~ 98 (124)
T 1s1g_A 88 DDELAFYGILP 98 (124)
T ss_dssp HHHHHHTTCCG
T ss_pred HHHHHHcCCCh
Confidence 99999999997
No 35
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=90.10 E-value=0.097 Score=45.76 Aligned_cols=78 Identities=12% Similarity=0.096 Sum_probs=55.6
Q ss_pred EEEEEcCEEEEeccceeccCChHHHHhhCCC-C----CCCcceEEecCCCCCHHHHHHHHHHhhCCceeecC-CchhhHH
Q 007644 30 LVIQVNNIRYLLHKFPLLPKCGLLQRLCSDP-E----DSDSVTIELHDIPGGEDAFELCAKFCYGITINLSA-HNFVPAF 103 (595)
Q Consensus 30 Vtl~V~g~~F~lHK~vLas~S~YFr~Lf~~~-~----e~~~~~I~L~d~pGGa~afelll~FcYg~~i~It~-~NV~~Ll 103 (595)
|+|.|||+.|...+..|....+ .|+... + ......+-|. =+ ++.|+.|++|.-+|++.+.+ ..+..++
T Consensus 2 V~LNVGG~~f~t~~~TL~~~p~---s~L~~~~~~~~~~~~~~~~FiD-Rd--p~~F~~ILnflR~g~l~~p~~~~~~~l~ 75 (105)
T 1nn7_A 2 IVLNVSGTRFQTWQDTLERYPD---TLLGSSERDFFYHPETQQYFFD-RD--PDIFRHILNFYRTGKLHYPRHECISAYD 75 (105)
T ss_dssp EEEEETTEEEEECHHHHHTSCS---SSTTSGGGGGGEEGGGTEEEEC-SC--TTTHHHHHHHHHHSCBCCCTTSCHHHHH
T ss_pred EEEEECCEEEEEeHHHHhcCCC---ccccccCCcccccCCCCcEEEe-CC--cHHHHHHHHHHhcCCCCCCCCcCHHHHH
Confidence 7899999999999988876532 123321 1 1122345543 33 48999999999999887643 3467899
Q ss_pred HhhcccCccc
Q 007644 104 CAAKFLRMAE 113 (595)
Q Consensus 104 cAA~~LqM~e 113 (595)
.-|+|.++++
T Consensus 76 ~Ea~fy~i~~ 85 (105)
T 1nn7_A 76 EELAFFGLIP 85 (105)
T ss_dssp HHHHHHTCCS
T ss_pred HHHHHcCCCH
Confidence 9999999997
No 36
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=88.23 E-value=0.21 Score=46.04 Aligned_cols=82 Identities=12% Similarity=0.102 Sum_probs=57.6
Q ss_pred CCeeEEEEEcCEEEEeccceeccCChHHHHhhCCC-C----CCCcceEEecCCCCCHHHHHHHHHHhhCCceeecC-Cch
Q 007644 26 APSDLVIQVNNIRYLLHKFPLLPKCGLLQRLCSDP-E----DSDSVTIELHDIPGGEDAFELCAKFCYGITINLSA-HNF 99 (595)
Q Consensus 26 ~l~DVtl~V~g~~F~lHK~vLas~S~YFr~Lf~~~-~----e~~~~~I~L~d~pGGa~afelll~FcYg~~i~It~-~NV 99 (595)
...=|+|.|||+.|...+..|...-+ .|+... + .....++-| |=. +..|+.|++|.-+|++.+.. ..+
T Consensus 33 ~~~~V~LNVGG~~F~T~~~TL~~~P~---S~L~~~~~~~~~~~~~g~yFi-DRd--p~~F~~ILnflR~G~l~~p~~~~~ 106 (140)
T 2nz0_B 33 QDELIVLNVSGRRFQTWRTTLERYPD---TLLGSTEKEFFFNEDTKEYFF-DRD--PEVFRCVLNFYRTGKLHYPRYECI 106 (140)
T ss_dssp CCCEEEEEETTEEEEEEHHHHHTCTT---STTTSGGGGGSEETTTTEEEE-CSC--HHHHHHHHHHHHHSSBCCCTTSCH
T ss_pred CCCEEEEEECCEEEEeeHHHHhcCCC---eeecccCCcccccCCCCeEEE-eCC--cHHHHHHHHHHhcCCcCCCCCcCH
Confidence 33457889999999999988876532 233321 1 112234554 333 69999999999999987643 246
Q ss_pred hhHHHhhcccCccc
Q 007644 100 VPAFCAAKFLRMAE 113 (595)
Q Consensus 100 ~~LlcAA~~LqM~e 113 (595)
..++.-|+|+++++
T Consensus 107 ~~l~eEa~fy~i~~ 120 (140)
T 2nz0_B 107 SAYDDELAFYGILP 120 (140)
T ss_dssp HHHHHHHHHHTCCG
T ss_pred HHHHHHHHHcCCCh
Confidence 78999999999997
No 37
>1pd7_B MAD1; PAH2, SIN3, eukaryotic transcriptional regulation, protein-protein interactions; NMR {Mus musculus}
Probab=64.49 E-value=1.7 Score=28.96 Aligned_cols=17 Identities=29% Similarity=0.266 Sum_probs=14.6
Q ss_pred CchhhHHHhhcccCccc
Q 007644 97 HNFVPAFCAAKFLRMAE 113 (595)
Q Consensus 97 ~NV~~LlcAA~~LqM~e 113 (595)
.||+.|+.||+||+=.|
T Consensus 3 ~nvq~LLeAAeyLErrE 19 (26)
T 1pd7_B 3 MNIQMLLEAADYLERRE 19 (26)
T ss_dssp CSTHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHH
Confidence 59999999999998544
No 38
>1vjh_A BET V I allergen family; structural genomics, center for eukaryotic structural genomics, protein structure initiative, CESG, plant protein; 2.10A {Arabidopsis thaliana} SCOP: d.129.3.1 PDB: 2q3q_A
Probab=46.32 E-value=12 Score=33.00 Aligned_cols=33 Identities=6% Similarity=-0.036 Sum_probs=24.9
Q ss_pred hhhCCCCCChhHHHHHHHhcCcccccccchhhHHHHHHHhhCCC
Q 007644 398 VVARDINMPVMKLVSLAETLPAIARGKHDDLYKFINIYLKEHPE 441 (595)
Q Consensus 398 EIA~D~nL~~sKF~~LAealPd~AR~~hDgLYRAIDiYLKaHp~ 441 (595)
|...|.+.+|.++.+.+ .++++|||-||-+||.
T Consensus 90 e~~~~~~~~p~~~~~~~-----------~~~~k~ie~yll~~p~ 122 (122)
T 1vjh_A 90 EKVHKDIDDPHSIIDES-----------VKYFKKLDEAILNFKE 122 (122)
T ss_dssp EESSTTSCCSHHHHHHH-----------HHHHHHHHHHHHHC--
T ss_pred EECCCCCCCHHHHHHHH-----------HHHHHHHHHHHhhCCC
Confidence 45667788888886654 6789999999999984
No 39
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=37.08 E-value=25 Score=38.42 Aligned_cols=83 Identities=12% Similarity=0.034 Sum_probs=54.5
Q ss_pred eEEEEEcCEEEEeccceeccCChH-HHHhhCCC--CCCCcceEEecCCCCCHHHHHHHHHHhhC-CceeecC-CchhhHH
Q 007644 29 DLVIQVNNIRYLLHKFPLLPKCGL-LQRLCSDP--EDSDSVTIELHDIPGGEDAFELCAKFCYG-ITINLSA-HNFVPAF 103 (595)
Q Consensus 29 DVtl~V~g~~F~lHK~vLas~S~Y-Fr~Lf~~~--~e~~~~~I~L~d~pGGa~afelll~FcYg-~~i~It~-~NV~~Ll 103 (595)
=|+|.|||+.|...+..|...-+- +-+++... -+....++-+ |=. ++.|+.+++|..+ |++.+.. -.+..+.
T Consensus 53 ~v~lNVgG~~f~t~~~tL~~~p~s~l~~~~~~~~~~~~~~~~~f~-DR~--~~~F~~IL~~~r~~g~l~~p~~~~~~~~~ 129 (514)
T 2r9r_B 53 RVVINISGLRFETQLKTLAQFPETLLGDPKKRMRYFDPLRNEYFF-DRN--RPSFDAILYYYQSGGRLRRPVNVPLDIFS 129 (514)
T ss_dssp EEEEEETTEEEEEEHHHHTTSTTSTTTCHHHHGGGEETTTTEEEE-CSC--HHHHHHHHHHHHHTSCCCCCTTSCHHHHH
T ss_pred EEEEEeCCEEEEecHHHHhcCCCCcccccccCCcccCCCCCCEEE-cCC--hHHHHHHHHHHhcCCccccCCcccHHHHH
Confidence 467899999999999888654211 11222211 0122334554 323 6999999999998 9987532 2345588
Q ss_pred HhhcccCcccc
Q 007644 104 CAAKFLRMAES 114 (595)
Q Consensus 104 cAA~~LqM~e~ 114 (595)
.-|+|.++.+.
T Consensus 130 ~E~~f~~i~~~ 140 (514)
T 2r9r_B 130 EEIRFYELGEE 140 (514)
T ss_dssp HHHHHTTCCHH
T ss_pred HHHHhcCCCHH
Confidence 89999999973
No 40
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=33.19 E-value=25 Score=29.79 Aligned_cols=36 Identities=8% Similarity=0.033 Sum_probs=31.5
Q ss_pred ceeecCCchhhHHHhhcccCcccccccchHHHHHHHHhHHhh
Q 007644 91 TINLSAHNFVPAFCAAKFLRMAESVEKGNFILKLESFFHSCI 132 (595)
Q Consensus 91 ~i~It~~NV~~LlcAA~~LqM~e~~~~gNL~~~ce~FL~~~v 132 (595)
.=.|+++|...++..|+.++.++ |.++|..|+....
T Consensus 5 ~~~L~~~NCl~i~~~A~~~~~~~------L~~~a~~fi~~nF 40 (105)
T 2eqx_A 5 SSGVQVGNCLQVMWLADRHSDPE------LYTAAKHCAKTHL 40 (105)
T ss_dssp CCCCCTTTHHHHHHHHHHTTCHH------HHHHHHHHHHHTC
T ss_pred hccCCHHHHHHHHHHHHHcCCHH------HHHHHHHHHHHHH
Confidence 34689999999999999999985 9999999998765
Done!