Query 007647
Match_columns 595
No_of_seqs 282 out of 1858
Neff 6.9
Searched_HMMs 46136
Date Thu Mar 28 13:27:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007647.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007647hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02190 cellulose synthase-li 100.0 5E-134 1E-138 1113.0 45.3 585 1-590 1-640 (756)
2 PLN02638 cellulose synthase A 100.0 3E-133 6E-138 1135.1 48.2 588 3-592 249-963 (1079)
3 PLN02189 cellulose synthase 100.0 2E-132 4E-137 1125.4 49.5 590 1-592 229-925 (1040)
4 PLN02400 cellulose synthase 100.0 1E-132 3E-137 1129.8 46.2 587 3-591 256-967 (1085)
5 PLN02436 cellulose synthase A 100.0 3E-132 7E-137 1121.9 46.4 587 3-591 265-978 (1094)
6 PLN02195 cellulose synthase A 100.0 2E-131 4E-136 1112.4 49.7 585 5-591 154-859 (977)
7 PLN02915 cellulose synthase A 100.0 8E-131 2E-135 1112.2 48.4 587 3-591 187-926 (1044)
8 PLN02248 cellulose synthase-li 100.0 6E-128 1E-132 1090.3 46.1 585 4-592 263-1020(1135)
9 PLN02893 Cellulose synthase-li 100.0 1E-125 3E-130 1052.2 48.0 568 2-591 5-630 (734)
10 PF03552 Cellulose_synt: Cellu 100.0 7E-117 1E-121 974.8 28.6 494 95-590 1-607 (720)
11 PRK11498 bcsA cellulose syntha 100.0 1.8E-65 4E-70 587.0 47.1 415 19-594 182-616 (852)
12 TIGR03030 CelA cellulose synth 100.0 2.7E-65 5.9E-70 587.2 48.0 428 19-593 53-504 (713)
13 PRK05454 glucosyltransferase M 100.0 6.5E-40 1.4E-44 371.9 47.8 348 21-498 40-413 (691)
14 PRK14583 hmsR N-glycosyltransf 100.0 8.9E-39 1.9E-43 350.2 41.1 227 90-461 72-307 (444)
15 PRK11204 N-glycosyltransferase 100.0 4E-36 8.8E-41 326.5 42.2 228 89-461 50-286 (420)
16 TIGR03111 glyc2_xrt_Gpos1 puta 100.0 2.5E-36 5.5E-41 330.4 38.9 277 89-511 45-340 (439)
17 cd04191 Glucan_BSP_ModH Glucan 100.0 5.5E-38 1.2E-42 319.4 23.8 238 95-456 1-253 (254)
18 COG1215 Glycosyltransferases, 100.0 2.6E-36 5.7E-41 328.2 31.6 227 92-460 53-290 (439)
19 PRK14716 bacteriophage N4 adso 100.0 9E-33 2E-37 304.1 41.7 259 89-484 62-353 (504)
20 cd06437 CESA_CaSu_A2 Cellulose 100.0 1.5E-32 3.2E-37 274.0 22.1 222 93-454 1-232 (232)
21 PRK11234 nfrB bacteriophage N4 100.0 3.7E-31 7.9E-36 302.1 35.4 237 89-459 59-334 (727)
22 cd06427 CESA_like_2 CESA_like_ 100.0 2.1E-31 4.6E-36 267.8 22.3 226 93-460 1-236 (241)
23 cd06421 CESA_CelA_like CESA_Ce 100.0 3.1E-31 6.8E-36 262.9 22.0 223 93-457 1-233 (234)
24 cd06435 CESA_NdvC_like NdvC_li 100.0 4.2E-30 9.1E-35 256.3 23.5 224 96-460 1-234 (236)
25 TIGR03472 HpnI hopanoid biosyn 100.0 4.4E-28 9.6E-33 260.1 34.9 224 90-455 38-273 (373)
26 PF13641 Glyco_tranf_2_3: Glyc 100.0 1.7E-30 3.6E-35 257.5 7.4 220 93-453 1-228 (228)
27 PRK15489 nfrB bacteriophage N4 100.0 2E-26 4.3E-31 260.5 36.1 237 89-459 67-342 (703)
28 cd04190 Chitin_synth_C C-termi 100.0 2E-28 4.4E-33 247.4 14.3 216 97-456 1-243 (244)
29 cd02520 Glucosylceramide_synth 100.0 1.4E-27 3E-32 232.6 18.7 191 93-453 1-195 (196)
30 cd04192 GT_2_like_e Subfamily 99.9 4E-26 8.7E-31 224.9 20.0 218 97-453 1-229 (229)
31 TIGR03469 HonB hopene-associat 99.9 5.5E-25 1.2E-29 237.1 30.1 226 89-451 36-279 (384)
32 cd06439 CESA_like_1 CESA_like_ 99.9 9.7E-26 2.1E-30 226.9 18.3 220 89-457 25-251 (251)
33 cd06434 GT2_HAS Hyaluronan syn 99.9 9.6E-25 2.1E-29 217.0 21.2 224 94-456 1-234 (235)
34 COG2943 MdoH Membrane glycosyl 99.9 5.6E-22 1.2E-26 209.9 36.6 279 93-503 144-438 (736)
35 cd02525 Succinoglycan_BP_ExoA 99.9 8.4E-23 1.8E-27 203.8 22.7 222 94-460 1-233 (249)
36 cd06436 GlcNAc-1-P_transferase 99.9 1.5E-21 3.3E-26 189.7 16.0 159 97-325 1-175 (191)
37 cd06438 EpsO_like EpsO protein 99.8 1.6E-20 3.4E-25 180.8 11.6 156 97-325 1-167 (183)
38 cd04184 GT2_RfbC_Mx_like Myxoc 99.8 1.3E-19 2.8E-24 175.7 16.9 122 93-286 1-122 (202)
39 cd04195 GT2_AmsE_like GT2_AmsE 99.8 1.6E-18 3.4E-23 168.2 16.7 118 96-286 1-119 (201)
40 PF13632 Glyco_trans_2_3: Glyc 99.8 1E-17 2.2E-22 162.3 15.2 133 246-454 1-143 (193)
41 cd04196 GT_2_like_d Subfamily 99.8 1.9E-17 4.2E-22 161.3 17.0 118 96-287 1-119 (214)
42 cd02510 pp-GalNAc-T pp-GalNAc- 99.7 9.1E-17 2E-21 167.0 21.8 109 96-270 1-109 (299)
43 cd06433 GT_2_WfgS_like WfgS an 99.7 1.8E-17 3.8E-22 159.2 15.2 114 96-286 1-114 (202)
44 PLN02726 dolichyl-phosphate be 99.7 7.5E-17 1.6E-21 162.6 19.8 124 90-284 6-129 (243)
45 cd02522 GT_2_like_a GT_2_like_ 99.7 2.1E-16 4.5E-21 155.4 19.0 98 95-270 1-98 (221)
46 cd06442 DPM1_like DPM1_like re 99.7 3.9E-16 8.5E-21 153.8 18.9 104 97-270 1-104 (224)
47 cd06913 beta3GnTL1_like Beta 1 99.7 2.9E-16 6.2E-21 155.2 18.0 110 97-270 1-110 (219)
48 cd04186 GT_2_like_c Subfamily 99.7 3E-16 6.6E-21 146.0 15.1 156 97-426 1-158 (166)
49 PRK10073 putative glycosyl tra 99.7 3.5E-16 7.6E-21 165.3 17.3 116 92-281 5-120 (328)
50 cd06420 GT2_Chondriotin_Pol_N 99.7 1.1E-15 2.4E-20 145.7 17.7 104 97-269 1-104 (182)
51 cd04185 GT_2_like_b Subfamily 99.7 1.1E-15 2.4E-20 148.7 16.8 113 97-282 1-113 (202)
52 PRK10018 putative glycosyl tra 99.6 5.9E-15 1.3E-19 152.5 17.8 117 91-281 3-119 (279)
53 cd02526 GT2_RfbF_like RfbF is 99.6 2.4E-15 5.2E-20 149.6 14.4 112 97-285 1-115 (237)
54 PRK10063 putative glycosyl tra 99.6 9.6E-15 2.1E-19 148.4 18.6 101 93-264 1-102 (248)
55 cd06423 CESA_like CESA_like is 99.6 1.8E-15 4E-20 140.1 11.9 116 97-285 1-116 (180)
56 cd04188 DPG_synthase DPG_synth 99.6 8.1E-15 1.7E-19 144.0 17.1 105 97-270 1-108 (211)
57 PF13506 Glyco_transf_21: Glyc 99.6 8.6E-15 1.9E-19 141.2 13.4 150 223-452 14-175 (175)
58 PF03142 Chitin_synth_2: Chiti 99.6 1E-12 2.2E-17 145.0 30.3 297 90-459 22-379 (527)
59 PF00535 Glycos_transf_2: Glyc 99.6 5.7E-15 1.2E-19 136.7 10.8 157 96-325 1-165 (169)
60 PTZ00260 dolichyl-phosphate be 99.6 2.9E-13 6.2E-18 143.4 25.2 128 90-283 67-200 (333)
61 cd04179 DPM_DPG-synthase_like 99.5 3.1E-13 6.7E-18 128.9 13.7 118 97-287 1-118 (185)
62 cd04187 DPM1_like_bac Bacteria 99.5 1.1E-12 2.4E-17 125.4 16.8 155 97-326 1-160 (181)
63 PRK13915 putative glucosyl-3-p 99.5 2.1E-13 4.6E-18 142.8 12.1 124 90-283 28-152 (306)
64 TIGR01556 rhamnosyltran L-rham 99.4 4.4E-12 9.6E-17 130.5 16.4 107 101-282 2-109 (281)
65 PF10111 Glyco_tranf_2_2: Glyc 99.4 1.2E-11 2.7E-16 127.9 18.7 108 96-267 1-111 (281)
66 PRK10714 undecaprenyl phosphat 99.4 1.1E-11 2.5E-16 130.8 18.2 109 92-270 5-116 (325)
67 cd00761 Glyco_tranf_GTA_type G 99.4 1.8E-11 3.9E-16 110.5 15.0 113 97-283 1-113 (156)
68 COG1216 Predicted glycosyltran 99.3 1.4E-11 3.1E-16 128.8 14.8 121 92-286 2-123 (305)
69 COG0463 WcaA Glycosyltransfera 99.2 8.4E-11 1.8E-15 109.5 11.9 101 92-263 2-102 (291)
70 cd02511 Beta4Glucosyltransfera 99.2 1E-10 2.2E-15 117.0 12.9 97 94-270 1-97 (229)
71 KOG2571 Chitin synthase/hyalur 99.1 9.6E-10 2.1E-14 125.7 16.8 162 226-453 425-596 (862)
72 KOG2547 Ceramide glucosyltrans 98.9 2.8E-08 6E-13 103.2 16.6 229 91-452 83-314 (431)
73 KOG2978 Dolichol-phosphate man 98.9 2.1E-08 4.5E-13 95.2 11.9 120 93-282 3-122 (238)
74 KOG2977 Glycosyltransferase [G 98.8 3.4E-08 7.4E-13 99.4 12.1 114 94-270 68-186 (323)
75 cd02514 GT13_GLCNAC-TI GT13_GL 98.2 1.1E-05 2.3E-10 85.4 12.8 132 95-283 2-136 (334)
76 KOG3738 Predicted polypeptide 97.4 0.00046 9.9E-09 72.8 7.7 110 90-270 121-230 (559)
77 KOG3737 Predicted polypeptide 97.3 0.001 2.2E-08 70.0 9.1 124 89-281 151-274 (603)
78 PF13704 Glyco_tranf_2_4: Glyc 97.2 0.0014 3E-08 56.4 7.6 38 102-147 1-38 (97)
79 KOG3736 Polypeptide N-acetylga 96.9 0.0011 2.3E-08 74.6 5.2 115 89-270 138-252 (578)
80 PF13712 Glyco_tranf_2_5: Glyc 96.1 0.015 3.1E-07 58.2 7.0 49 226-281 41-89 (217)
81 cd00899 b4GalT Beta-4-Galactos 95.1 0.23 4.9E-06 49.7 11.2 53 406-458 138-200 (219)
82 PF03452 Anp1: Anp1; InterPro 94.8 0.63 1.4E-05 48.0 13.8 56 90-149 22-79 (269)
83 PF03071 GNT-I: GNT-I family; 92.7 0.67 1.5E-05 50.9 10.1 51 90-144 90-140 (434)
84 TIGR02460 osmo_MPGsynth mannos 92.3 1.1 2.3E-05 47.5 10.4 45 223-270 140-184 (381)
85 PRK14503 mannosyl-3-phosphogly 90.9 1.4 3E-05 46.9 9.6 45 223-270 141-185 (393)
86 PF09488 Osmo_MPGsynth: Mannos 89.1 1.6 3.5E-05 46.4 8.3 44 223-269 140-183 (381)
87 PRK14502 bifunctional mannosyl 88.5 3.2 6.9E-05 48.2 10.9 45 223-270 145-189 (694)
88 COG4092 Predicted glycosyltran 87.8 10 0.00022 39.0 12.6 57 207-266 60-116 (346)
89 PF02364 Glucan_synthase: 1,3- 83.0 2.9 6.2E-05 49.2 7.1 75 404-484 409-484 (817)
90 PF11316 Rhamno_transf: Putati 77.6 30 0.00066 35.0 11.7 56 207-270 83-140 (234)
91 PF06306 CgtA: Beta-1,4-N-acet 75.6 9.8 0.00021 40.1 7.5 106 94-263 88-194 (347)
92 PF05679 CHGN: Chondroitin N-a 73.3 30 0.00066 39.0 11.4 49 210-266 315-363 (499)
93 PF01644 Chitin_synth_1: Chiti 71.3 87 0.0019 30.0 12.2 53 210-268 110-162 (163)
94 KOG4179 Lysyl hydrolase/glycos 71.1 6.1 0.00013 42.7 4.9 38 226-268 97-134 (568)
95 PRK09382 ispDF bifunctional 2- 64.4 80 0.0017 34.4 12.0 39 227-269 83-121 (378)
96 cd04182 GT_2_like_f GT_2_like_ 63.2 76 0.0016 29.6 10.5 44 224-270 73-117 (186)
97 cd02540 GT2_GlmU_N_bac N-termi 62.4 69 0.0015 31.2 10.4 43 225-270 73-116 (229)
98 PF02709 Glyco_transf_7C: N-te 62.1 7.8 0.00017 32.3 2.9 43 370-426 21-66 (78)
99 TIGR03310 matur_ygfJ molybdenu 61.8 65 0.0014 30.3 9.8 43 225-270 74-116 (188)
100 TIGR03584 PseF pseudaminic aci 57.4 1E+02 0.0022 30.7 10.6 58 225-282 76-133 (222)
101 PF13896 Glyco_transf_49: Glyc 55.3 14 0.0003 39.1 4.2 46 231-281 119-164 (317)
102 cd06431 GT8_LARGE_C LARGE cata 52.3 1.4E+02 0.0031 31.0 11.0 47 94-146 2-48 (280)
103 TIGR01173 glmU UDP-N-acetylglu 48.0 1.4E+02 0.003 32.7 10.7 42 225-270 75-117 (451)
104 KOG1413 N-acetylglucosaminyltr 43.3 94 0.002 33.4 7.8 48 92-144 66-114 (411)
105 cd06432 GT8_HUGT1_C_like The C 43.2 2.3E+02 0.005 28.8 10.7 36 111-148 15-50 (248)
106 PF02434 Fringe: Fringe-like; 41.2 1.4E+02 0.0031 30.4 8.8 27 242-269 85-111 (252)
107 cd04181 NTP_transferase NTP_tr 39.4 2.3E+02 0.005 27.0 9.8 40 225-270 81-120 (217)
108 PF05045 RgpF: Rhamnan synthes 38.3 4.3E+02 0.0094 29.9 12.8 26 257-285 381-406 (498)
109 PRK15171 lipopolysaccharide 1, 37.3 4.9E+02 0.011 27.7 12.5 52 93-148 24-75 (334)
110 PF04724 Glyco_transf_17: Glyc 36.2 71 0.0015 34.5 5.9 35 229-265 165-199 (356)
111 PRK13385 2-C-methyl-D-erythrit 33.4 4.8E+02 0.01 25.7 11.1 41 227-270 84-124 (230)
112 cd02516 CDP-ME_synthetase CDP- 31.1 4.1E+02 0.0089 25.5 10.1 43 226-269 79-121 (218)
113 TIGR02665 molyb_mobA molybdopt 30.8 1.8E+02 0.0038 27.4 7.2 41 224-269 72-113 (186)
114 KOG0916 1,3-beta-glucan syntha 29.9 55 0.0012 40.9 4.1 75 404-484 1173-1248(1679)
115 cd06915 NTP_transferase_WcbM_l 29.6 4.3E+02 0.0094 25.2 9.9 42 223-270 79-120 (223)
116 cd00505 Glyco_transf_8 Members 29.4 4.3E+02 0.0093 26.4 10.1 35 243-282 95-129 (246)
117 PF09623 Cas_NE0113: CRISPR-as 27.6 2.1E+02 0.0045 28.9 7.2 61 96-165 3-63 (224)
118 PLN02917 CMP-KDO synthetase 27.0 6.6E+02 0.014 26.1 11.2 43 225-270 120-162 (293)
119 cd02509 GDP-M1P_Guanylyltransf 26.2 4.3E+02 0.0094 27.0 9.6 43 224-266 83-125 (274)
120 cd06422 NTP_transferase_like_1 26.0 3.7E+02 0.008 26.0 8.7 39 225-269 82-120 (221)
121 PRK14357 glmU bifunctional N-a 25.6 5.2E+02 0.011 28.2 10.7 53 224-282 72-125 (448)
122 cd06425 M1P_guanylylT_B_like_N 25.0 3.8E+02 0.0083 26.2 8.7 42 225-270 84-125 (233)
123 cd02503 MobA MobA catalyzes th 24.5 2.7E+02 0.0059 26.0 7.2 42 224-269 68-109 (181)
124 KOG3916 UDP-Gal:glucosylcerami 23.7 1.6E+02 0.0035 31.6 5.7 41 94-140 152-195 (372)
125 PF13733 Glyco_transf_7N: N-te 23.4 82 0.0018 29.2 3.1 42 94-138 48-89 (136)
126 PHA01631 hypothetical protein 22.8 93 0.002 29.8 3.4 72 227-325 56-127 (176)
127 PRK14355 glmU bifunctional N-a 22.7 8.1E+02 0.018 26.9 11.6 43 225-270 79-122 (459)
128 PLN02728 2-C-methyl-D-erythrit 22.5 7.5E+02 0.016 25.1 10.4 41 227-269 103-143 (252)
129 PRK13368 3-deoxy-manno-octulos 22.4 7.3E+02 0.016 24.2 10.3 40 225-270 75-115 (238)
130 PRK02726 molybdopterin-guanine 21.7 4E+02 0.0087 25.7 8.0 41 225-269 78-118 (200)
131 PLN03153 hypothetical protein; 21.4 6.5E+02 0.014 28.7 10.1 28 241-269 208-235 (537)
132 PF12804 NTP_transf_3: MobA-li 21.3 3.6E+02 0.0079 24.4 7.3 54 224-283 69-123 (160)
133 PRK14353 glmU bifunctional N-a 20.7 6.3E+02 0.014 27.5 10.1 43 224-269 81-124 (446)
134 PF15050 SCIMP: SCIMP protein 20.6 1.3E+02 0.0029 27.2 3.7 40 547-587 2-46 (133)
135 cd06430 GT8_like_2 GT8_like_2 20.4 1E+03 0.022 25.1 11.7 37 242-281 95-131 (304)
No 1
>PLN02190 cellulose synthase-like protein
Probab=100.00 E-value=5.1e-134 Score=1112.96 Aligned_cols=585 Identities=54% Similarity=0.985 Sum_probs=534.1
Q ss_pred CCCCCCCCCCceeeeecCchhHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHHHHHHHHHHHHHHHHHHhhccccccC
Q 007647 1 MANTKSSCLPLYEKVFHKNTYHRALDVIILFLLLCLLFYRLSTLKNHGFAWFLAFLCESCFTFIWILIVNCKWTPLTYKT 80 (595)
Q Consensus 1 ~~~~~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~yl~wR~~~~~~~~~~w~~~~~~e~~~~~~~~l~~~~~~~p~~r~~ 80 (595)
|++.+.+.+||||++++|++++|++.++++++++.|++||+++.++.+..|+++++||+|+++.|+++++.+|+|++|.+
T Consensus 1 ~~~~~~~~~pL~~~~~~~~~~~r~~~~~vl~~~~~~l~~R~~~~~~~~~~W~~~~~~E~wf~~~WlL~q~~kw~pv~r~~ 80 (756)
T PLN02190 1 MADSSSSLPPLCERISHKSYFLRAVDLTILGLLFSLLLYRILHMSENDTVWLVAFLCESCFSFVWLLITCIKWSPAEYKP 80 (756)
T ss_pred CCcccCCCCCceeeeeccchhHHHHHHHHHHHHHHHHHHHHhCCCcccHHHHHHHHHHHHHHHHHHHhccceeeecCCCC
Confidence 67788899999999999999999999999999999999999999998889999999999999999999999999999999
Q ss_pred CccchhhccCCCCCeEEEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhh
Q 007647 81 YPQRLQERIQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFC 160 (595)
Q Consensus 81 ~~~~l~~~~~~~P~V~V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c 160 (595)
+|++|+++-+++|.|||||+|+||.+|||.++.+|+.|++++|||+||+.|||+|||+++.|+++|.||++||+.|+|||
T Consensus 81 ~p~~l~~r~~~Lp~VDvFV~TaDP~kEPpl~v~nTvLSilA~dYP~eklscYvSDDG~s~LT~~al~EAa~FA~~WvPFC 160 (756)
T PLN02190 81 YPDRLDERVHDLPSVDMFVPTADPVREPPIIVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWVPFC 160 (756)
T ss_pred CcHHHHHhhccCCcceEEEecCCCCcCCHHHHHHHHHHHHhccCCccccceEEecCCCcHhHHHHHHHHHHHHhhhcccc
Confidence 99999877667999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccccCCcccccCCCCCCCCCchhhHHHHhhhH------------------------------------------HHh
Q 007647 161 KKYNVQIRAPFRYFPDSEPSDSSSGELLQDWKNMK------------------------------------------VIS 198 (595)
Q Consensus 161 ~~~gv~~r~~~~~~~~~~~~~~~~~~~~~~~~~~k------------------------------------------v~~ 198 (595)
|||+|++|+||.||+... +.+.+.+|++||+.|| |++
T Consensus 161 rK~~IepRaPe~YF~~~~-~~~~~~~f~~e~~~~K~eYee~k~ri~~a~~~~~~~~~~~~~~~~~~~~~~dH~~iiqVll 239 (756)
T PLN02190 161 KKYNVRVRAPFRYFLNPP-VATEDSEFSKDWEMTKREYEKLSRKVEDATGDSHWLDAEDDFEAFSNTKPNDHSTIVKVVW 239 (756)
T ss_pred cccCCCcCCHHHHhcCCC-CCCCCchhHHHHHHHHHHHHHHHHHHHhhccCCCCcccCCcccccCCCCCCCCccceEEEe
Confidence 999999999999998532 2224468999998887 333
Q ss_pred hcCCCC--CCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEEcCCCCCCchHHHHHHHhhhcCCCCC-
Q 007647 199 ENKGGL--SDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNE- 275 (595)
Q Consensus 199 ~~~~~~--~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl~~DAD~~~~~pd~L~~~v~~f~d~~~d- 275 (595)
+++++. +.++|+++||+|||||+.+||+||||||+.+|+|++++|+|||+++||||++|||++++++||||+|+..+
T Consensus 240 ~~~~~~~~~~~lP~LVYvSREKrP~~~Hh~KAGAmNaLlRVSavmtNaP~iLnlDCDmY~Nns~~~r~AmCf~ld~~~~~ 319 (756)
T PLN02190 240 ENKGGVGDEKEVPHLVYISREKRPNYLHHYKAGAMNFLVRVSGLMTNAPYMLNVDCDMYANEADVVRQAMCIFLQKSKNS 319 (756)
T ss_pred cCCCCccccccCceEEEEeccCCCCCCcccccchhHHHHHHhhhhccCCeEEEecCccccCchhHHHHhhhhhcCCCCCC
Confidence 333222 23699999999999999999999999999999999999999999999999999999999999999988655
Q ss_pred CcEEEEeCCccccCchhh-hHhhHhhhhhhhcccCCceeccccceeehhhhhcccchhhhhcc---------chhHHHHH
Q 007647 276 NEFAFIQSPQYFYDRPEN-LCILNEYIGKGIVGIQGPFYQGTGTFHRRDVVYGLCLDQIEHQG---------NIVEDELL 345 (595)
Q Consensus 276 ~~vg~VQ~pq~f~d~~~~-~~~f~~~~~~g~~~~~~~~~~Gtg~~~rr~al~g~~~~~~~~~~---------~~~~~~~~ 345 (595)
+++||||+||+|+|+|+| +++||++.+.|+||+|||+|+||||+|||+||||.+|+.+.... ......+.
T Consensus 320 ~~~~fVQfPQ~F~D~y~n~~~v~f~~~~~GldGlqGP~YvGTGCffrR~alyG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 399 (756)
T PLN02190 320 NHCAFVQFPQEFYDSNTNELTVLQSYLGRGIAGIQGPIYIGSGCFHTRRVMYGLSSDDLEDDGSLSSVATREFLAEDSLA 399 (756)
T ss_pred CeeEEEeCchhhccccCccceEEEEEeeccccccCCcccccCCcceEeeeecCCCcccccccccccccccccccchhhhh
Confidence 489999999999999999 99999999999999999999999999999999998765433211 02234456
Q ss_pred HhhCCcHHHHHHHHHhhcCCcCCCCCchhhhHHHHhHhhccccccCCCcCccccCCCCCccchHHHHHHHHhCCcEEEEe
Q 007647 346 KKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYC 425 (595)
Q Consensus 346 ~~~g~s~~f~~s~~~~~r~~~~~~~~~~~~~~~~~~~vg~c~ye~~~~w~~~~G~~~~~itED~~t~~~l~~~Gwr~~y~ 425 (595)
++||+|+.|+.|+..++++... +..++++.++++++|.+|.||++|.||+|+||.|+++|||+.||++||++||||+|+
T Consensus 400 ~~fg~s~~f~~s~~~~~~~~~~-~~~~~~~~~~eA~~V~sC~YE~~T~WG~evG~~ygSitED~~TGl~mh~rGWrSvY~ 478 (756)
T PLN02190 400 REFGNSKEMVKSVVDALQRKPN-PQNSLTNSIEAAQEVGHCHYEYQTSWGNTIGWLYDSVAEDLNTSIGIHSRGWTSSYI 478 (756)
T ss_pred hhcCCcHHHHHHHHHHhccCCC-CccchHHHHHHHHhhcccCCCCCCchhhccCcccceeechHHHHHHHHccCCceEec
Confidence 8999999999999877754432 223356889999999999999999999999999999999999999999999999999
Q ss_pred CCCCcceeccCCCCHHHHHHHHHHhhhhhHHHHHhhcchhhhhccCCCCHHHHHHhHHhhhhhhhHHHHHHHHHHHHHHH
Q 007647 426 LPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCI 505 (595)
Q Consensus 426 ~~~~~~~~g~aP~tl~~~~~Qr~RWa~G~~q~~~~~~~pl~~~~~~~l~~~qrl~y~~~~~~~~~~~~~l~~~~~p~~~l 505 (595)
+|+++++.|.+|+++.+.++||+||++|.+|++++++||++.+..++|++.||++|++..+ |+.+++.++|+++|++||
T Consensus 479 ~p~~~AFlG~aP~~l~~~L~Q~~RWa~G~lqI~fsr~nPl~~g~~~~L~l~QRLaYl~~~~-~~~sip~l~Y~~lP~l~L 557 (756)
T PLN02190 479 SPDPPAFLGSMPPGGPEAMVQQRRWATGLIEVLFNKQSPLIGMFCRKIRFRQRLAYLYVFT-CLRSIPELIYCLLPAYCL 557 (756)
T ss_pred CCCchhhcCcCCCChHHHhhhhhhHhhhhHHHHHhcCCCceeccCCCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 9888899999999999999999999999999999999999875458999999999999877 999999999999999999
Q ss_pred HhCCccccccChhhHHHHHHHHHHHHHHHHHHHHHhCCccchhhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeC
Q 007647 506 ITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEIT 585 (595)
Q Consensus 506 ~~g~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~w~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~F~vT 585 (595)
++|++++|.. +|+.+++++++++++++++|++|+|.++++|||+||+|+|.++++|++|++++++|.||+++++|+||
T Consensus 558 l~g~~i~P~~--~~~~~~~~l~~~~~~~~l~E~~~sG~s~~~WWnnqr~w~I~~~sa~l~a~~~~~lK~lg~s~~~F~vT 635 (756)
T PLN02190 558 LHNSALFPKG--VYLGIIVTLVGMHCLYTLWEFMSLGFSVQSWYVSQSFWRIKATSSWLFSIQDIILKLLGISKTVFIVT 635 (756)
T ss_pred HcCCccccCc--cHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHhhhheEEeecchHHHHHHHHHHHHHhccccceEEEe
Confidence 9999999974 57777888899999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCC
Q 007647 586 QKIHR 590 (595)
Q Consensus 586 ~K~~~ 590 (595)
+|...
T Consensus 636 sK~~~ 640 (756)
T PLN02190 636 KKTMP 640 (756)
T ss_pred ecccc
Confidence 99643
No 2
>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit
Probab=100.00 E-value=2.7e-133 Score=1135.13 Aligned_cols=588 Identities=39% Similarity=0.670 Sum_probs=538.2
Q ss_pred CCCCCCCCceeeeecCch---hHHHHHHHHHHHHHHHHHHHhhccccch-hhHHHHHHHHHHHHHHHHHHHHHhhccccc
Q 007647 3 NTKSSCLPLYEKVFHKNT---YHRALDVIILFLLLCLLFYRLSTLKNHG-FAWFLAFLCESCFTFIWILIVNCKWTPLTY 78 (595)
Q Consensus 3 ~~~~~~~~l~~~~~~~~~---~~r~~~~~~~~~~~~yl~wR~~~~~~~~-~~w~~~~~~e~~~~~~~~l~~~~~~~p~~r 78 (595)
++.++++|||++++++++ .+|+++++.+++++++|+||+++..+.. ++|+++++||+||+++|++.|+.||+|++|
T Consensus 249 ~~~~~~~pL~~~~~i~~~~~~~yR~~~~~~l~~l~~~l~yRi~~~~~~~~~~Wl~s~~cE~WFaf~Wll~q~~Kw~Pv~R 328 (1079)
T PLN02638 249 LNDEARQPLSRKVSIPSSRINPYRMVIVLRLVILCIFLHYRITNPVRNAYALWLISVICEIWFALSWILDQFPKWLPVNR 328 (1079)
T ss_pred ccccCCCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHHhccCCccHHHHHHHHHHHHHHHHHHHHhcccccccccc
Confidence 456789999999999999 5999999999999999999999987654 569999999999999999999999999999
Q ss_pred cCCccchhhcc------CCCCCeEEEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHHHHHh
Q 007647 79 KTYPQRLQERI------QELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKF 152 (595)
Q Consensus 79 ~~~~~~l~~~~------~~~P~V~V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~ 152 (595)
.+++++|+.+- .++|.|||||+|.++.+|||.++.+||.|+|+.|||.||+.|||+|||++..|+++|.||++|
T Consensus 329 ~t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~F 408 (1079)
T PLN02638 329 ETYLDRLALRYDREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEF 408 (1079)
T ss_pred ccCHHHHHHHhccCCCcccCCCccEEEeCCCCccCccHHHHHHHHHHHhhcccccceeEEEecCCchHHHHHHHHHHHHH
Confidence 99999998642 359999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhcccccCCcccccCC-CC-CCCCCchhhHHHHhhhH-----------------------------------
Q 007647 153 AKLWVPFCKKYNVQIRAPFRYFPD-SE-PSDSSSGELLQDWKNMK----------------------------------- 195 (595)
Q Consensus 153 a~~w~p~c~~~gv~~r~~~~~~~~-~~-~~~~~~~~~~~~~~~~k----------------------------------- 195 (595)
|+.|+||||||+|++|+||.||+. .+ .+++..++|++||+.||
T Consensus 409 A~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mK~eYEe~k~RIe~l~a~~~~~p~~~~~m~dgt~W~g 488 (1079)
T PLN02638 409 ARKWVPFCKKYNIEPRAPEWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKVRINGLVAKAQKVPEEGWIMQDGTPWPG 488 (1079)
T ss_pred HHhhcccccccCCCcCCHHHHhccCCCcccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhccccCCccccccCCccCCC
Confidence 999999999999999999999994 33 34556679999999997
Q ss_pred -----------HHhhcCCCC---CCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEEcCCCCCCchHH
Q 007647 196 -----------VISENKGGL---SDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEI 261 (595)
Q Consensus 196 -----------v~~~~~~~~---~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl~~DAD~~~~~pd~ 261 (595)
|+++++++. +.++|+++||+||||||.+||+||||||+++|+|++++|+|||+++||||++|||++
T Consensus 489 ~~~~dHp~IiqVll~~~~~~d~~g~~lP~LVYVSREKRPg~~Hh~KAGAMNaLlRVSavmTNaPfILNLDCDmYiNns~a 568 (1079)
T PLN02638 489 NNTRDHPGMIQVFLGHSGGLDTEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKA 568 (1079)
T ss_pred CCCCCCHHHHHHHhcCCCccccccccccceEEEecccCCCCCcccccchHHHHHHHhhhccCCCeEeecccCcccCchHH
Confidence 444443322 237999999999999999999999999999999999999999999999999989999
Q ss_pred HHHHHhhhcCCCCCCcEEEEeCCcccc-----Cchhh-hHhhHhhhhhhhcccCCceeccccceeehhhhhcccchhhhh
Q 007647 262 VLQAMCLHLGSKNENEFAFIQSPQYFY-----DRPEN-LCILNEYIGKGIVGIQGPFYQGTGTFHRRDVVYGLCLDQIEH 335 (595)
Q Consensus 262 L~~~v~~f~d~~~d~~vg~VQ~pq~f~-----d~~~~-~~~f~~~~~~g~~~~~~~~~~Gtg~~~rr~al~g~~~~~~~~ 335 (595)
++++||||+|++.++++||||+||+|+ |+|+| +++||+++++|+||+|||+|+||||+|||+||||..|+.+..
T Consensus 569 lr~AMCf~lDp~~g~~vafVQFPQrF~~i~k~D~Ygn~~~vffdi~~~GlDGlqGP~YvGTGC~fRR~ALYG~~p~~~~~ 648 (1079)
T PLN02638 569 LREAMCFLMDPNLGKSVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPIKPK 648 (1079)
T ss_pred HHHhhhhhcCcccCCeeEEecCCcccCCCCCCCcccccceeeeccccccccccCCccccccCcceeehhhcCcCCccccc
Confidence 999999999998899999999999999 89999 999999999999999999999999999999999985543210
Q ss_pred ----------------------------------------------------------cc--chhHHHHHHhhCCcHHHH
Q 007647 336 ----------------------------------------------------------QG--NIVEDELLKKFGNSKEFI 355 (595)
Q Consensus 336 ----------------------------------------------------------~~--~~~~~~~~~~~g~s~~f~ 355 (595)
+. .+....+.++||+|..|+
T Consensus 649 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~S~~fi 728 (1079)
T PLN02638 649 HKKPGFLSSLCGGSRKKSSKSSKKGSDKKKSGKHVDPTVPVFNLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAVFV 728 (1079)
T ss_pred ccccccccccccccccccccccchhhccccccccccccccccccccccccccccccchhhhhhhhhhhhhhhccccHHHH
Confidence 00 011124567899999999
Q ss_pred HHHHHhhcCCcCCCCCchhhhHHHHhHhhccccccCCCcCccccCCCCCccchHHHHHHHHhCCcEEEEeCCCCcceecc
Q 007647 356 KSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGC 435 (595)
Q Consensus 356 ~s~~~~~r~~~~~~~~~~~~~~~~~~~vg~c~ye~~~~w~~~~G~~~~~itED~~t~~~l~~~Gwr~~y~~~~~~~~~g~ 435 (595)
.|+....++.+ .+.+.++.++++++|.+|.||++|.||+||||.|+++|||+.||++||++||||+|++|+++++.|+
T Consensus 729 ~S~~~~~~~~~--~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTEDv~TG~rLH~rGWrSvY~~P~r~AF~Gl 806 (1079)
T PLN02638 729 ASTLMENGGVP--QSATPESLLKEAIHVISCGYEDKTDWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGS 806 (1079)
T ss_pred HHHHHhhcCCC--CCCCcHHHHHHHHhhccCCCccCCchhhhcCeeecceecHHHHHHHHHcCCCcEEecCCCchHhcCc
Confidence 99987777654 3456778999999999999999999999999999999999999999999999999998777889999
Q ss_pred CCCCHHHHHHHHHHhhhhhHHHHHhhcchhhhhccCCCCHHHHHHhHHhhhhhhhHHHHHHHHHHHHHHHHhCCcccccc
Q 007647 436 ASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKV 515 (595)
Q Consensus 436 aP~tl~~~~~Qr~RWa~G~~q~~~~~~~pl~~~~~~~l~~~qrl~y~~~~~~~~~~~~~l~~~~~p~~~l~~g~~~~p~~ 515 (595)
+|+|+.+++.||+||++|++|+++++++|++.+..++|++.||++|+++++||+.+++.++|+++|++||++|++++|.+
T Consensus 807 AP~~l~d~L~Qr~RWA~G~lqI~fsr~nPl~~G~~~rL~l~QRL~Yl~~~~yp~~sip~liY~llP~l~Ll~G~~i~P~v 886 (1079)
T PLN02638 807 APINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKWLERFAYVNTTIYPITSIPLLLYCTLPAVCLLTGKFIIPQI 886 (1079)
T ss_pred CCCCHHHHHHHHHHHhhcchheeeccCCccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCc
Confidence 99999999999999999999999989999997645899999999999999999999999999999999999999999999
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHhCCccchhhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCcCCCCCc
Q 007647 516 QEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEITQKIHRSQ 592 (595)
Q Consensus 516 ~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~w~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~F~vT~K~~~~~ 592 (595)
+++++++++++|++++++++++++|+|.++++|||+||+|+|.++++++++++++++|+||+++++|.||+|..+.+
T Consensus 887 s~~~~~~f~~lfl~~~~~~llE~~wsG~si~~WWrnQr~w~I~~tSa~lfavl~~iLK~Lggs~~~F~VTsK~~d~~ 963 (1079)
T PLN02638 887 SNIASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDED 963 (1079)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHhccccHHHHhhhhhheehhhhHHHHHHHHHHHHHHHccCcccceecccccccc
Confidence 99988889999999999999999999999999999999999999999999999999999999999999999976543
No 3
>PLN02189 cellulose synthase
Probab=100.00 E-value=1.8e-132 Score=1125.42 Aligned_cols=590 Identities=40% Similarity=0.657 Sum_probs=537.0
Q ss_pred CCCCCCCCCCceeeeecCchh---HHHHHHHHHHHHHHHHHHHhhccccc-hhhHHHHHHHHHHHHHHHHHHHHHhhccc
Q 007647 1 MANTKSSCLPLYEKVFHKNTY---HRALDVIILFLLLCLLFYRLSTLKNH-GFAWFLAFLCESCFTFIWILIVNCKWTPL 76 (595)
Q Consensus 1 ~~~~~~~~~~l~~~~~~~~~~---~r~~~~~~~~~~~~yl~wR~~~~~~~-~~~w~~~~~~e~~~~~~~~l~~~~~~~p~ 76 (595)
|++..++++|||+++++++++ +|+++++.+++++++|+||+++..+. .++|+++++||+||+++|++.|+.||+|+
T Consensus 229 ~~~~~~~~~pL~~~~~~~~~~~~pyR~~~~~~l~~l~~~l~yRi~~~~~~~~~~W~~s~~~E~wFaf~Wll~q~~kw~Pv 308 (1040)
T PLN02189 229 MALIDEARQPLSRKVPIASSKVNPYRMVIVARLVVLAFFLRYRILHPVHDAIGLWLTSIICEIWFAVSWILDQFPKWFPI 308 (1040)
T ss_pred hhhcccCCCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhcCcCccchHHHHHHHHHHHHHHHHHHHccCcccccc
Confidence 445677899999999999994 99999999999999999999998744 47899999999999999999999999999
Q ss_pred cccCCccchhhcc------CCCCCeEEEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHHHH
Q 007647 77 TYKTYPQRLQERI------QELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEAS 150 (595)
Q Consensus 77 ~r~~~~~~l~~~~------~~~P~V~V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~ 150 (595)
+|.+++++|+.+- .++|.|||||+|.+|.+|||.++.+||.|+|+.|||.||+.|||+|||++..|+++|.||+
T Consensus 309 ~R~t~~drL~~r~~~~~~~~~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa 388 (1040)
T PLN02189 309 DRETYLDRLSLRYEREGEPNMLSPVDIFVSTVDPLKEPPLVTANTVLSILAMDYPVDKISCYVSDDGASMLTFEALSETA 388 (1040)
T ss_pred cceeCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceeEEEecCCchHHHHHHHHHHH
Confidence 9999999998641 2499999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhhhhhhhcccccCCcccccCC-CC-CCCCCchhhHHHHhhhH---------------------------------
Q 007647 151 KFAKLWVPFCKKYNVQIRAPFRYFPD-SE-PSDSSSGELLQDWKNMK--------------------------------- 195 (595)
Q Consensus 151 ~~a~~w~p~c~~~gv~~r~~~~~~~~-~~-~~~~~~~~~~~~~~~~k--------------------------------- 195 (595)
+||+.|+||||||+|++|+||.||+. .+ ++++.+++|++||+.||
T Consensus 389 ~FA~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~~K~eYEe~kvRI~~l~a~~~~~p~~~~~m~dGt~W 468 (1040)
T PLN02189 389 EFARKWVPFCKKFSIEPRAPEFYFSLKVDYLKDKVQPTFVKERRAMKREYEEFKVRINAIVAKAQKVPPEGWIMQDGTPW 468 (1040)
T ss_pred HHHHhhcccccccCCCcCCHHHHhccCCCcccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCccCCccceeccCccC
Confidence 99999999999999999999999994 33 34556679999999997
Q ss_pred -------------HHhhcCCCC---CCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEEcCCCCCCch
Q 007647 196 -------------VISENKGGL---SDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNP 259 (595)
Q Consensus 196 -------------v~~~~~~~~---~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl~~DAD~~~~~p 259 (595)
|+++++++. +.++|+++||+||||||.+||+||||||+++|+|++++|+|||+++||||++|+|
T Consensus 469 ~g~~~~dHp~IiQVll~~~~~~d~~g~~lP~LVYVSREKrPg~~Hh~KAGAMNaLlRVSavmTNaPfILNLDCDmY~Nns 548 (1040)
T PLN02189 469 PGNNTRDHPGMIQVFLGHSGGHDTEGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNAPFMLNLDCDHYINNS 548 (1040)
T ss_pred CCCCCCCCHHHHHHHhcCCCCccccccccceeEEEeccCCCCCCcccchhhHHHHHHHhhhccCCCeEEEccCccccCch
Confidence 444444332 3479999999999999999999999999999999999999999999999999889
Q ss_pred HHHHHHHhhhcCCCCCCcEEEEeCCcccc-----Cchhh-hHhhHhhhhhhhcccCCceeccccceeehhhhhcccchhh
Q 007647 260 EIVLQAMCLHLGSKNENEFAFIQSPQYFY-----DRPEN-LCILNEYIGKGIVGIQGPFYQGTGTFHRRDVVYGLCLDQI 333 (595)
Q Consensus 260 d~L~~~v~~f~d~~~d~~vg~VQ~pq~f~-----d~~~~-~~~f~~~~~~g~~~~~~~~~~Gtg~~~rr~al~g~~~~~~ 333 (595)
++|+++||||+|++.++++||||+||+|+ |+|+| +++||+++++|+||+|||+||||||+|||+||||..+...
T Consensus 549 ~alr~AMCfflDp~~g~~vAfVQFPQrF~~i~k~D~Ygn~~~vffdi~~~GlDGlqGP~YvGTGC~fRR~ALyG~~p~~~ 628 (1040)
T PLN02189 549 KAVREAMCFLMDPQIGRKVCYVQFPQRFDGIDTHDRYANRNTVFFDINMKGLDGIQGPVYVGTGCVFRRQALYGYDPPKG 628 (1040)
T ss_pred HHHHHhhhhhcCCccCceeEEEeCccccCCCCCCCccCCccceeeeeeecccccCCCccccccCceeeeeeeeccCcccc
Confidence 99999999999998889999999999999 89999 9999999999999999999999999999999999855311
Q ss_pred h--------------------h-------------------ccchhHHHHHHhhCCcHHHHHHHHHhhcCCcCCCCCchh
Q 007647 334 E--------------------H-------------------QGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNIS 374 (595)
Q Consensus 334 ~--------------------~-------------------~~~~~~~~~~~~~g~s~~f~~s~~~~~r~~~~~~~~~~~ 374 (595)
. . +.....+.+..+||+|..|+.|+....++. ....+..
T Consensus 629 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~S~~fi~S~~~~~~~~--~~~~~~~ 706 (1040)
T PLN02189 629 PKRPKMVTCDCCPCFGRRKKKHAKNGLNGEVAALGGMESDKEMLMSQMNFEKKFGQSAIFVTSTLMEEGGV--PPSSSPA 706 (1040)
T ss_pred cccccccccchhhhcccccccccccccccccccccccchhhhhhhhhhhhHhhhccchhhhhhhhhhhcCC--CCCCCcH
Confidence 0 0 001234556679999999999987664332 2244567
Q ss_pred hhHHHHhHhhccccccCCCcCccccCCCCCccchHHHHHHHHhCCcEEEEeCCCCcceeccCCCCHHHHHHHHHHhhhhh
Q 007647 375 RSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGL 454 (595)
Q Consensus 375 ~~~~~~~~vg~c~ye~~~~w~~~~G~~~~~itED~~t~~~l~~~Gwr~~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G~ 454 (595)
++++++++|.+|.||++|.||+||||.|+++|||+.||++||++||||+|++|+++++.|.+|+|+.+++.||+||++|+
T Consensus 707 ~~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTED~~TG~rlH~rGWrSvY~~p~r~AF~GlAP~~L~~~L~Qr~RWA~G~ 786 (1040)
T PLN02189 707 ALLKEAIHVISCGYEDKTDWGLELGWIYGSITEDILTGFKMHCRGWRSIYCMPKRAAFKGSAPINLSDRLNQVLRWALGS 786 (1040)
T ss_pred HHHHHHHHhhccccccCCchhhccCeeccccccHHHHHHHHHccCCceEecCCCcHHhcCcCCCCHHHHHHHHHHHhhhh
Confidence 88999999999999999999999999999999999999999999999999988788999999999999999999999999
Q ss_pred HHHHHhhcchhhhhc-cCCCCHHHHHHhHHhhhhhhhHHHHHHHHHHHHHHHHhCCccccccChhhHHHHHHHHHHHHHH
Q 007647 455 LEILFSKRNPILATL-IGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLY 533 (595)
Q Consensus 455 ~q~~~~~~~pl~~~~-~~~l~~~qrl~y~~~~~~~~~~~~~l~~~~~p~~~l~~g~~~~p~~~~~~~~~~~~~~l~~~~~ 533 (595)
+|++++++||++.++ .++|++.||++|+++++||+.+++.++|+++|++||++|++++|.++++++.+++.+|++++++
T Consensus 787 lqI~~sr~nPl~~g~~~~~L~l~QRL~Yl~~~ly~~~sip~liY~~lP~l~Ll~g~~i~p~vs~~~~~~fi~lf~~~~~~ 866 (1040)
T PLN02189 787 VEIFFSRHSPLLYGYKGGNLKWLERFAYVNTTIYPFTSLPLLAYCTLPAICLLTGKFIMPPISTFASLFFIALFMSIFAT 866 (1040)
T ss_pred HHHhhccCCccccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCccchHHHHHHHHHHHHHHHH
Confidence 999999999999753 2679999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCccchhhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCcCCCCCc
Q 007647 534 TLLEYIQAGLSIRSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEITQKIHRSQ 592 (595)
Q Consensus 534 ~~~~~~~~g~~~~~~w~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~F~vT~K~~~~~ 592 (595)
.+++++|+|.++++|||+||+|+|.++++++++++++++|+|++++++|.||+|..+++
T Consensus 867 ~llE~~~sG~s~~~WWrnQq~w~I~~~Sa~Lfavl~~ilKvlggs~~~F~VTsK~~~d~ 925 (1040)
T PLN02189 867 GILELRWSGVSIEEWWRNEQFWVIGGVSAHLFAVVQGLLKVLAGIDTNFTVTSKATDDD 925 (1040)
T ss_pred HHHHHHhcCCcHHHHhhhhhHHHHhhhHHHHHHHHHHHHHHhccCcccceecccccccc
Confidence 99999999999999999999999999999999999999999999999999999986543
No 4
>PLN02400 cellulose synthase
Probab=100.00 E-value=1.3e-132 Score=1129.81 Aligned_cols=587 Identities=39% Similarity=0.659 Sum_probs=537.4
Q ss_pred CCCCCCCCceeeeecCch---hHHHHHHHHHHHHHHHHHHHhhccccch-hhHHHHHHHHHHHHHHHHHHHHHhhccccc
Q 007647 3 NTKSSCLPLYEKVFHKNT---YHRALDVIILFLLLCLLFYRLSTLKNHG-FAWFLAFLCESCFTFIWILIVNCKWTPLTY 78 (595)
Q Consensus 3 ~~~~~~~~l~~~~~~~~~---~~r~~~~~~~~~~~~yl~wR~~~~~~~~-~~w~~~~~~e~~~~~~~~l~~~~~~~p~~r 78 (595)
++.+.++|||++++++++ .+|+++++.+++++++|+||+++..+.. ++|+++++||+||+++|++.|+.||.|++|
T Consensus 256 ~~~~~~~pL~~~~~i~~~~~~~yR~~~~~~lv~l~~~l~yRi~~~~~~~~~~Wl~s~~cE~wFaf~Wll~q~~Kw~Pv~R 335 (1085)
T PLN02400 256 MADDARLPMSRVVPIPSSRLTPYRIVIILRLIILGFFLQYRVTHPVKDAYGLWLTSVICEIWFALSWLLDQFPKWYPINR 335 (1085)
T ss_pred ccccccCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhhccCcccHHHHHHHHHHHHHHHHHHHHccCcccccccc
Confidence 456778999999999999 5999999999999999999999987764 569999999999999999999999999999
Q ss_pred cCCccchhhcc------CCCCCeEEEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHHHHHh
Q 007647 79 KTYPQRLQERI------QELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKF 152 (595)
Q Consensus 79 ~~~~~~l~~~~------~~~P~V~V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~ 152 (595)
.+++++|+.+- .++|.|||||+|.++.+|||.++.+||.|+|+.|||.||+.|||+|||++..|+++|.||++|
T Consensus 336 ~t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~Al~Eaa~F 415 (1085)
T PLN02400 336 ETYLDRLALRYDRDGEPSQLAPVDVFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGSAMLTFEALSETAEF 415 (1085)
T ss_pred eeCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHHHH
Confidence 99999998641 359999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhcccccCCcccccCC-CCC-CCCCchhhHHHHhhhH-----------------------------------
Q 007647 153 AKLWVPFCKKYNVQIRAPFRYFPD-SEP-SDSSSGELLQDWKNMK----------------------------------- 195 (595)
Q Consensus 153 a~~w~p~c~~~gv~~r~~~~~~~~-~~~-~~~~~~~~~~~~~~~k----------------------------------- 195 (595)
|+.|+||||||+|++|+||.||+. .++ +++.+.+|++||+.||
T Consensus 416 A~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mK~eYEe~k~RIe~l~~~~~~~~~~~~~m~dgt~W~g 495 (1085)
T PLN02400 416 ARKWVPFCKKHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVAKAQKIPEEGWTMQDGTPWPG 495 (1085)
T ss_pred HHhhcchhhhcCCCcCCHHHHhccCCCcccCCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhccCCccccccccCccCCC
Confidence 999999999999999999999994 343 3566789999999997
Q ss_pred -----------HHhhcCCCC---CCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEEcCCCCCCchHH
Q 007647 196 -----------VISENKGGL---SDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEI 261 (595)
Q Consensus 196 -----------v~~~~~~~~---~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl~~DAD~~~~~pd~ 261 (595)
|+++++++. +.++|+++||+|||||+.+||+||||||+.+|+|++++|++||+++||||++|||++
T Consensus 496 ~~~~dHp~iIqVll~~~~~~d~~g~~LP~LVYVSREKRP~~~Hh~KAGAMNaLlRVSavmTNaP~ILNlDCDmY~Nns~a 575 (1085)
T PLN02400 496 NNPRDHPGMIQVFLGHSGGLDTDGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNNSKA 575 (1085)
T ss_pred CCCCCCchhhhhhhcCCCCcccccccCceeEEEeccCCCCCCcchhhhhhHHHHHHhhhhcCCceEEecccccccCCchh
Confidence 444444432 347999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcCCCCCCcEEEEeCCcccc-----Cchhh-hHhhHhhhhhhhcccCCceeccccceeehhhhhcccchhhhh
Q 007647 262 VLQAMCLHLGSKNENEFAFIQSPQYFY-----DRPEN-LCILNEYIGKGIVGIQGPFYQGTGTFHRRDVVYGLCLDQIEH 335 (595)
Q Consensus 262 L~~~v~~f~d~~~d~~vg~VQ~pq~f~-----d~~~~-~~~f~~~~~~g~~~~~~~~~~Gtg~~~rr~al~g~~~~~~~~ 335 (595)
++++||||+|++.++++||||+||+|+ |+|+| +++||++.++|+||+|||+|+||||+|||+||||.++...+.
T Consensus 576 ~r~AMCf~lD~~~g~~~afVQFPQrF~gi~~~D~Y~n~~~vffdi~~~GldGlqGP~YvGTGC~frR~aLYG~~p~~~~~ 655 (1085)
T PLN02400 576 LKEAMCFMMDPAIGKKTCYVQFPQRFDGIDLHDRYANRNIVFFDINLKGLDGIQGPVYVGTGCCFNRQALYGYDPVLTEE 655 (1085)
T ss_pred HHhhhhheeccCCCceeEEEeCCcccCCCCCCCCcccceeEEeeccccccccCCCccccccCcceeeeeeccCCCccccc
Confidence 999999999999899999999999999 89999 999999999999999999999999999999999975521000
Q ss_pred --------------------------------------------------------cc--chhHHHHHHhhCCcHHHHHH
Q 007647 336 --------------------------------------------------------QG--NIVEDELLKKFGNSKEFIKS 357 (595)
Q Consensus 336 --------------------------------------------------------~~--~~~~~~~~~~~g~s~~f~~s 357 (595)
+. .+..+.+..+||+|..|+.|
T Consensus 656 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~fG~S~~fi~S 735 (1085)
T PLN02400 656 DLEPNIIVKSCCGSRKKGKGSKKYNIDKKRAMKRTESNVPIFNMEDIEEGVEGYDDERSLLMSQKSLEKRFGQSPVFIAA 735 (1085)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhhhhhccccHHHHHH
Confidence 00 12345577899999999999
Q ss_pred HHHhhcCCcCCCCCchhhhHHHHhHhhccccccCCCcCccccCCCCCccchHHHHHHHHhCCcEEEEeCCCCcceeccCC
Q 007647 358 AAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCAS 437 (595)
Q Consensus 358 ~~~~~r~~~~~~~~~~~~~~~~~~~vg~c~ye~~~~w~~~~G~~~~~itED~~t~~~l~~~Gwr~~y~~~~~~~~~g~aP 437 (595)
+.+.-++ . ..+.+.++.++++++|.+|.||++|.||+||||.|+++|||+.||++||++||||+|++|+++++.|++|
T Consensus 736 ~~~~~~~-~-~~~~~~~~ll~eA~~V~sC~YE~~T~WG~evGwiYGSvTED~~TG~~LH~rGWrSvY~~p~r~af~GlAP 813 (1085)
T PLN02400 736 TFMEQGG-I-PPSTNPATLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAP 813 (1085)
T ss_pred HHHHhcC-C-CCCCCcHHHHHHHHHhhccCCccCCchhhhhCeeccceechHHHHHHHHccCCceEecCCCcHhhcCcCC
Confidence 9844332 2 2355678899999999999999999999999999999999999999999999999999987889999999
Q ss_pred CCHHHHHHHHHHhhhhhHHHHHhhcchhhhhccCCCCHHHHHHhHHhhhhhhhHHHHHHHHHHHHHHHHhCCccccccCh
Q 007647 438 PSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQE 517 (595)
Q Consensus 438 ~tl~~~~~Qr~RWa~G~~q~~~~~~~pl~~~~~~~l~~~qrl~y~~~~~~~~~~~~~l~~~~~p~~~l~~g~~~~p~~~~ 517 (595)
+|+.+++.||+||++|.+|++++++||++.++.++|++.||++|+++++||+.+++.++|+++|++||++|++++|.+++
T Consensus 814 ~~l~d~L~Qr~RWA~G~lqI~~sr~nPl~~G~~~~L~l~QRL~Yl~~~~y~~~slp~liY~llP~l~LltG~~i~P~vs~ 893 (1085)
T PLN02400 814 INLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPITSIPLLAYCVLPAFCLITNKFIIPEISN 893 (1085)
T ss_pred CCHHHHHHHHHHHhhcchheeeccCCccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCccch
Confidence 99999999999999999999999999999754589999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhCCccchhhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCcCCCCC
Q 007647 518 PTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEITQKIHRS 591 (595)
Q Consensus 518 ~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~w~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~F~vT~K~~~~ 591 (595)
+++++++++|++++++++++++|+|.++++|||+||+|+|.++++++++++++++|+|++++++|.||+|..++
T Consensus 894 ~~~~~fi~lf~~~~~~~lLE~~~sG~si~~WWrnQq~w~I~~~Sa~Lfavl~~ilKvLgg~~~~F~VTsK~~d~ 967 (1085)
T PLN02400 894 YASMWFILLFISIFATGILELRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKASDE 967 (1085)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCccHHHhhhccceeeehhhHHHHHHHHHHHHHHhcCCcccceecCCcccc
Confidence 99898999999999999999999999999999999999999999999999999999999999999999998654
No 5
>PLN02436 cellulose synthase A
Probab=100.00 E-value=3.4e-132 Score=1121.85 Aligned_cols=587 Identities=38% Similarity=0.655 Sum_probs=534.6
Q ss_pred CCCCCCCCceeeeecCchh---HHHHHHHHHHHHHHHHHHHhhccccch-hhHHHHHHHHHHHHHHHHHHHHHhhccccc
Q 007647 3 NTKSSCLPLYEKVFHKNTY---HRALDVIILFLLLCLLFYRLSTLKNHG-FAWFLAFLCESCFTFIWILIVNCKWTPLTY 78 (595)
Q Consensus 3 ~~~~~~~~l~~~~~~~~~~---~r~~~~~~~~~~~~yl~wR~~~~~~~~-~~w~~~~~~e~~~~~~~~l~~~~~~~p~~r 78 (595)
++.++++||++++++++++ +|+++++.+++++++|+||+++..+.. ++|+++++||+||+++|++.|+.||.|++|
T Consensus 265 ~~~~~~~pL~~~~~i~~~~~~pyR~~~~~rlv~l~~fl~yRi~~~~~~a~~~Wl~s~~cE~WFaf~Wll~Q~~Kw~Pv~R 344 (1094)
T PLN02436 265 MMDEGRQPLSRKLPIPSSKINPYRMIIILRLVILGLFFHYRILHPVNDAYGLWLTSVICEIWFAVSWILDQFPKWYPIER 344 (1094)
T ss_pred cccccCCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhhccCcccHHHHHHHHHHHHHHHHHHHHccCcccccccc
Confidence 3456789999999999994 999999999999999999999987764 569999999999999999999999999999
Q ss_pred cCCccchhhc------cCCCCCeEEEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHHHHHh
Q 007647 79 KTYPQRLQER------IQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKF 152 (595)
Q Consensus 79 ~~~~~~l~~~------~~~~P~V~V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~ 152 (595)
.+++++|+.+ +.++|.|||||+|.+|.+|||.++.+||.|+|+.|||.||+.|||+|||++..|+++|.||++|
T Consensus 345 ~t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~F 424 (1094)
T PLN02436 345 ETYLDRLSLRYEKEGKPSELASVDVFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEF 424 (1094)
T ss_pred eeCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHHHH
Confidence 9999999864 1459999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhcccccCCcccccCC-CC-CCCCCchhhHHHHhhhH-----------------------------------
Q 007647 153 AKLWVPFCKKYNVQIRAPFRYFPD-SE-PSDSSSGELLQDWKNMK----------------------------------- 195 (595)
Q Consensus 153 a~~w~p~c~~~gv~~r~~~~~~~~-~~-~~~~~~~~~~~~~~~~k----------------------------------- 195 (595)
|+.|+||||||+|++|+||.||+. .+ ++++...+|++||+.||
T Consensus 425 Ak~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mKreYEe~K~RIe~l~~~~~~vp~~~~~m~dgt~W~g 504 (1094)
T PLN02436 425 ARKWVPFCKKFSIEPRAPEWYFSQKMDYLKNKVHPAFVRERRAMKREYEEFKVKINALVATAQKVPEDGWTMQDGTPWPG 504 (1094)
T ss_pred HHhhcccccccCCCcCCHHHHhhccCCcccccCChhHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhhhhccCccCCC
Confidence 999999999999999999999994 33 34555679999999987
Q ss_pred -----------HHhhcCCCC---CCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEEcCCCCCCchHH
Q 007647 196 -----------VISENKGGL---SDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEI 261 (595)
Q Consensus 196 -----------v~~~~~~~~---~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl~~DAD~~~~~pd~ 261 (595)
|+++++++. +.++|+++||+|||||+.+||+||||||+.+|+|++++|++||+++||||++|||++
T Consensus 505 ~~~~dHp~IIqVll~~~~~~d~~g~~LP~LVYVSREKRPg~~Hh~KAGAMNaLlRVSavmTNaP~ILNLDCDmYiNns~a 584 (1094)
T PLN02436 505 NNVRDHPGMIQVFLGHSGVRDVEGNELPRLVYVSREKRPGFDHHKKAGAMNSLIRVSAVLSNAPYLLNVDCDHYINNSKA 584 (1094)
T ss_pred CCCCCCccceEEEecCCCCcccccccCceEEEEecccCCCCCcchhhhhhhhhhhhheeecCCceEEecccccccCchHH
Confidence 222222211 237999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcCCCCCCcEEEEeCCcccc-----Cchhh-hHhhHhhhhhhhcccCCceeccccceeehhhhhcccchh---
Q 007647 262 VLQAMCLHLGSKNENEFAFIQSPQYFY-----DRPEN-LCILNEYIGKGIVGIQGPFYQGTGTFHRRDVVYGLCLDQ--- 332 (595)
Q Consensus 262 L~~~v~~f~d~~~d~~vg~VQ~pq~f~-----d~~~~-~~~f~~~~~~g~~~~~~~~~~Gtg~~~rr~al~g~~~~~--- 332 (595)
++++||||+|++.++++||||+||+|+ |+|+| +++||++.++|+||+|||+|+||||+|||+||||..+..
T Consensus 585 ~r~AMCfllD~~~g~~~afVQFPQrF~gi~k~D~Y~n~~~vffdi~~~GlDGlqGP~YvGTGC~frR~aLYG~~pp~~~~ 664 (1094)
T PLN02436 585 LREAMCFMMDPQSGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAPKKKK 664 (1094)
T ss_pred HHHhhhhhcCCccCCeeEEEcCCcccCCCCCCCcccccceEeeeccccccccCCCccccccCceeeeeeeeccCCccccc
Confidence 999999999999999999999999999 89999 999999999999999999999999999999999985421
Q ss_pred --------h----------------------------h-------------------hcc--chhHHHHHHhhCCcHHHH
Q 007647 333 --------I----------------------------E-------------------HQG--NIVEDELLKKFGNSKEFI 355 (595)
Q Consensus 333 --------~----------------------------~-------------------~~~--~~~~~~~~~~~g~s~~f~ 355 (595)
| + .+. .+..+.+.++||+|..|+
T Consensus 665 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~FG~S~~fi 744 (1094)
T PLN02436 665 PPGKTCNCWPKWCCLCCGSRKKKKKKKSKEKKKKKNREASKQIHALENIEEGIEGSNNEKSSETPQLKLEKKFGQSPVFV 744 (1094)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhHHhhhcccHHHH
Confidence 0 0 000 133455678899999999
Q ss_pred HHHHHhhcCCcCCCCCchhhhHHHHhHhhccccccCCCcCccccCCCCCccchHHHHHHHHhCCcEEEEeCCCCcceecc
Q 007647 356 KSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGC 435 (595)
Q Consensus 356 ~s~~~~~r~~~~~~~~~~~~~~~~~~~vg~c~ye~~~~w~~~~G~~~~~itED~~t~~~l~~~Gwr~~y~~~~~~~~~g~ 435 (595)
.|+.+..++.+ .+.+.++.++++++|++|.||++|.||+||||.|+++|||+.||++||++||||+|++|+++++.|.
T Consensus 745 ~S~~~~~~~~~--~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGwiYGSvTEDv~TG~rLH~rGWrSvY~~P~r~AF~Gl 822 (1094)
T PLN02436 745 ASTLLENGGVP--RNASPASLLREAIQVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGS 822 (1094)
T ss_pred HHHHHhhcCCC--CCCCcHHHHHHHHHhhcCCCcccChhhHhhCeeccceecHHHHHHHHHcCCCceEeCCCCchhhcCc
Confidence 99987765432 2345678899999999999999999999999999999999999999999999999998777789999
Q ss_pred CCCCHHHHHHHHHHhhhhhHHHHHhhcchhhhhccCCCCHHHHHHhHHhhhhhhhHHHHHHHHHHHHHHHHhCCcccccc
Q 007647 436 ASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKV 515 (595)
Q Consensus 436 aP~tl~~~~~Qr~RWa~G~~q~~~~~~~pl~~~~~~~l~~~qrl~y~~~~~~~~~~~~~l~~~~~p~~~l~~g~~~~p~~ 515 (595)
+|+|+.+++.||+||++|++|+++++++|++.+..++|++.||++|+++++||+.+++.++|+++|++||++|++++|.+
T Consensus 823 AP~~L~d~L~Qr~RWA~G~lQIffsr~nPl~~g~~~~L~l~QRL~Yl~~~ly~l~Slp~liY~~lP~l~LL~G~~i~P~v 902 (1094)
T PLN02436 823 APINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKWLERFSYINSVVYPWTSIPLIVYCTLPAICLLTGKFIVPEI 902 (1094)
T ss_pred CCCCHHHHHHHHHHHhhcceeeeeccCCcchhcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeecCcc
Confidence 99999999999999999999999999999997545799999999999999999999999999999999999999999999
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHhCCccchhhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCcCCCCC
Q 007647 516 QEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEITQKIHRS 591 (595)
Q Consensus 516 ~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~w~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~F~vT~K~~~~ 591 (595)
+++|+++++++|++++++++++++|+|.++++|||+||+|+|.++++++++++++++|+|++++++|.||+|..++
T Consensus 903 s~~~~~~fi~lfls~~~~~lLE~~wsG~si~~WWrnQq~w~I~~tSa~Lfavl~~iLKvLggs~~~F~VTsK~~d~ 978 (1094)
T PLN02436 903 SNYASILFMALFISIAATGILEMQWGGVGIDDWWRNEQFWVIGGVSSHLFALFQGLLKVLAGVNTNFTVTSKAADD 978 (1094)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcccceeccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999998654
No 6
>PLN02195 cellulose synthase A
Probab=100.00 E-value=1.7e-131 Score=1112.44 Aligned_cols=585 Identities=38% Similarity=0.663 Sum_probs=533.6
Q ss_pred CCCCCCceeeeecCchh---HHHHHHHHHHHHHHHHHHHhhccccch-hhHHHHHHHHHHHHHHHHHHHHHhhccccccC
Q 007647 5 KSSCLPLYEKVFHKNTY---HRALDVIILFLLLCLLFYRLSTLKNHG-FAWFLAFLCESCFTFIWILIVNCKWTPLTYKT 80 (595)
Q Consensus 5 ~~~~~~l~~~~~~~~~~---~r~~~~~~~~~~~~yl~wR~~~~~~~~-~~w~~~~~~e~~~~~~~~l~~~~~~~p~~r~~ 80 (595)
.|.++|||+++++++++ +|+++++.+++++.+|+||+++..+.. ++|+++++||+||+++|++.|+.||+|++|.+
T Consensus 154 ~~~~~pL~~~~~i~~~~~~pyR~~~~~~l~~l~~~l~yRi~~~~~~~~~~Wl~s~~cE~wFaf~Wll~q~~Kw~Pv~R~t 233 (977)
T PLN02195 154 ADAYEPLSRVIPIPRNKLTPYRAVIIMRLIILGLFFHYRITNPVDSAFGLWLTSVICEIWFAFSWVLDQFPKWSPINRET 233 (977)
T ss_pred ccccCCceEEEecCcccchhHHHHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHHHHHhcccccccccceE
Confidence 47789999999999994 999999999999999999999987765 58999999999999999999999999999999
Q ss_pred Cccchhhc------cCCCCCeEEEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHHHHHhhh
Q 007647 81 YPQRLQER------IQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAK 154 (595)
Q Consensus 81 ~~~~l~~~------~~~~P~V~V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~ 154 (595)
++++|+.+ +.++|.|||||+|.+|.+|||.++.+||.|+|+.|||.||+.|||+|||++..|+++|.||++|||
T Consensus 234 ~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FA~ 313 (977)
T PLN02195 234 YIDRLSARYEREGEPSQLAAVDFFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGAAMLSFESLVETAEFAR 313 (977)
T ss_pred CHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHHHHHH
Confidence 99999864 245999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhcccccCCcccccCC-CCC-CCCCchhhHHHHhhhH-------------------------------------
Q 007647 155 LWVPFCKKYNVQIRAPFRYFPD-SEP-SDSSSGELLQDWKNMK------------------------------------- 195 (595)
Q Consensus 155 ~w~p~c~~~gv~~r~~~~~~~~-~~~-~~~~~~~~~~~~~~~k------------------------------------- 195 (595)
.|+||||||+|++|+||.||+. .++ +++.+++|++||+.||
T Consensus 314 ~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~~K~eYEe~k~RIe~~~~~~~~~~~~~~~m~d~t~W~g~~ 393 (977)
T PLN02195 314 KWVPFCKKYSIEPRAPEFYFSQKIDYLKDKVQPSFVKERRAMKRDYEEYKVRVNALVAKAQKTPEEGWTMQDGTPWPGNN 393 (977)
T ss_pred hhcccccccCCCcCCHHHHhccCCCcccCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCcccccccCCccCCCCC
Confidence 9999999999999999999984 343 3556789999999997
Q ss_pred ---------HHhhcCCCC---CCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEEcCCCCCCchHHHH
Q 007647 196 ---------VISENKGGL---SDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVL 263 (595)
Q Consensus 196 ---------v~~~~~~~~---~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl~~DAD~~~~~pd~L~ 263 (595)
|+++++++. +.++|+++||+||||||.+||+||||||+++++|++++|+|||+++||||++|+|++|+
T Consensus 394 ~~dHp~IIqVll~~~~~~d~~g~~lP~LVYVSREKrPg~~Hh~KAGamNallrvSavmTNap~il~lDcDmy~n~s~~lr 473 (977)
T PLN02195 394 TRDHPGMIQVFLGETGARDIEGNELPRLVYVSREKRPGYQHHKKAGAENALVRVSAVLTNAPYILNLDCDHYVNNSKAVR 473 (977)
T ss_pred CCCCcchhhhhccCCCCcccccccCceeEEEeccCCCCCCcccccchhHHHHHHhhhccCCCeEEEecCccccCcHHHHH
Confidence 333333222 34799999999999999999999999999999999999999999999999998889999
Q ss_pred HHHhhhcCCCCCCcEEEEeCCcccc-----Cchhh-hHhhHhhhhhhhcccCCceeccccceeehhhhhcccchhhh---
Q 007647 264 QAMCLHLGSKNENEFAFIQSPQYFY-----DRPEN-LCILNEYIGKGIVGIQGPFYQGTGTFHRRDVVYGLCLDQIE--- 334 (595)
Q Consensus 264 ~~v~~f~d~~~d~~vg~VQ~pq~f~-----d~~~~-~~~f~~~~~~g~~~~~~~~~~Gtg~~~rr~al~g~~~~~~~--- 334 (595)
++||||+|++.++++||||+||+|+ |+|++ +++||+++++|+||+|||+|+||||+|||+||||..++.++
T Consensus 474 ~AMCf~~D~~~g~~va~VQ~PQ~F~~i~~~D~y~~~~~~ffd~~~~g~dglqGP~YvGTGC~fRR~ALyG~~p~~~~~~~ 553 (977)
T PLN02195 474 EAMCFLMDPVVGRDVCYVQFPQRFDGIDRSDRYANRNVVFFDVNMKGLDGIQGPVYVGTGCVFNRQALYGYGPPSLPRLP 553 (977)
T ss_pred HHHhhccCcccCCeeEEEcCCcccCCCCCCCCCCcccceeeeeeeccccccCCccccccCceeeehhhhccCcccccccc
Confidence 9999999998899999999999999 88998 99999999999999999999999999999999997543320
Q ss_pred ----------------hc----------------------------------cchhHHHHHHhhCCcHHHHHHHHHhhcC
Q 007647 335 ----------------HQ----------------------------------GNIVEDELLKKFGNSKEFIKSAAQTLEG 364 (595)
Q Consensus 335 ----------------~~----------------------------------~~~~~~~~~~~~g~s~~f~~s~~~~~r~ 364 (595)
.+ ..+....+..+||+|..|+.|+....++
T Consensus 554 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~fG~S~~fi~S~~~~~~~ 633 (977)
T PLN02195 554 KSSSSSSSCCCPTKKKPEQDPSEIYRDAKREDLNAAIFNLREIDNYDEYERSMLISQMSFEKTFGLSSVFIESTLMENGG 633 (977)
T ss_pred ccccccccccccccccccccchhhccccccccccccccccccccccchhhhhhhhhhhHHHHhhcccHHHHHHHHHHhcC
Confidence 00 0012235667899999999999877665
Q ss_pred CcCCCCCchhhhHHHHhHhhccccccCCCcCccccCCCCCccchHHHHHHHHhCCcEEEEeCCCCcceeccCCCCHHHHH
Q 007647 365 KTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGM 444 (595)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~vg~c~ye~~~~w~~~~G~~~~~itED~~t~~~l~~~Gwr~~y~~~~~~~~~g~aP~tl~~~~ 444 (595)
.+. ..+.+++++++++|.+|.||++|.||+||||.|+++|||+.||++||++||||+|++|+++++.|++|+|+.+++
T Consensus 634 ~~~--~~~~~~~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTEDv~TG~rlH~rGWrSvY~~p~r~af~G~AP~~L~~~L 711 (977)
T PLN02195 634 VPE--SANPSTLIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWRSIYCMPVRPAFKGSAPINLSDRL 711 (977)
T ss_pred CCC--CCCcHHHHHHHHhhhcccCccccchhhhcCeeccceecHHHHHHHHHccCCcEEecCCccHHhcccCCCCHHHHH
Confidence 543 345568899999999999999999999999999999999999999999999999998777889999999999999
Q ss_pred HHHHHhhhhhHHHHHhhcchhhhhcc-CCCCHHHHHHhHHhhhhhhhHHHHHHHHHHHHHHHHhCCccccccChhhHHHH
Q 007647 445 RQQKRWATGLLEILFSKRNPILATLI-GKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIP 523 (595)
Q Consensus 445 ~Qr~RWa~G~~q~~~~~~~pl~~~~~-~~l~~~qrl~y~~~~~~~~~~~~~l~~~~~p~~~l~~g~~~~p~~~~~~~~~~ 523 (595)
.||+||++|++|++++++||++.++. ++|++.||++|++.++||+.+++.++|+++|++||++|++++|.+++++++++
T Consensus 712 ~Qr~RWA~G~lqI~~sr~nPl~~g~~~~~L~~~QRL~Yl~~~ly~~~slp~liY~~lP~l~Ll~G~~i~P~vs~~~~~~f 791 (977)
T PLN02195 712 HQVLRWALGSVEIFLSRHCPLWYGYGGGRLKWLQRLAYINTIVYPFTSLPLIAYCTLPAICLLTGKFIIPTLSNLASMLF 791 (977)
T ss_pred HHHHHHHhchhhhhhccCCccccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeecccchHHHHHHH
Confidence 99999999999999999999997532 78999999999999999999999999999999999999999999888888889
Q ss_pred HHHHHHHHHHHHHHHHHhCCccchhhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCcCCCCC
Q 007647 524 LALFLIYKLYTLLEYIQAGLSIRSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEITQKIHRS 591 (595)
Q Consensus 524 ~~~~l~~~~~~~~~~~~~g~~~~~~w~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~F~vT~K~~~~ 591 (595)
+++|++++++++++++|+|.++++|||+||+|+|.++++++++++++++|+|++++++|.||+|..++
T Consensus 792 ~~lfl~~~~~~~lE~~~sG~si~~WWrnqq~w~I~~tSa~Lfavl~~llKvLggs~~~F~VTsK~~dd 859 (977)
T PLN02195 792 LGLFISIILTSVLELRWSGVSIEDLWRNEQFWVIGGVSAHLFAVFQGFLKMLAGLDTNFTVTAKAADD 859 (977)
T ss_pred HHHHHHHHHHHHHHHHhcccCHHHHhhhhhhhhhhhhHHHHHHHHHHHHHHHcCCCccceeccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999997654
No 7
>PLN02915 cellulose synthase A [UDP-forming], catalytic subunit
Probab=100.00 E-value=8.4e-131 Score=1112.17 Aligned_cols=587 Identities=40% Similarity=0.660 Sum_probs=531.3
Q ss_pred CCCCCCCCceeeeecCchh---HHHHHHHHHHHHHHHHHHHhhccccch-hhHHHHHHHHHHHHHHHHHHHHHhhccccc
Q 007647 3 NTKSSCLPLYEKVFHKNTY---HRALDVIILFLLLCLLFYRLSTLKNHG-FAWFLAFLCESCFTFIWILIVNCKWTPLTY 78 (595)
Q Consensus 3 ~~~~~~~~l~~~~~~~~~~---~r~~~~~~~~~~~~yl~wR~~~~~~~~-~~w~~~~~~e~~~~~~~~l~~~~~~~p~~r 78 (595)
++.+.++||++++++++++ +|+++++.+++++++|+||+++..+.. ++|+++++||+||+++|++.|+.||.|++|
T Consensus 187 ~~~~~~~pL~~~~~i~~~~~~pyR~~~~~rlv~l~~fl~yRi~~~~~~a~~~Wl~s~~cE~wFaf~Wll~q~~Kw~Pv~R 266 (1044)
T PLN02915 187 LLAEARQPLWRKVPIPSSKINPYRIVIVLRLVILCFFFRFRILTPAYDAYPLWLISVICEIWFALSWILDQFPKWFPINR 266 (1044)
T ss_pred cccccCCCceEEEecCcccchhHHHHHHHHHHHHHHHHHHHhcCcCCCchHHHHHHHHHHHHHHHHHHHccCcccccccc
Confidence 5567789999999999994 999999999999999999999954433 568999999999999999999999999999
Q ss_pred cCCccchhhc---c---CCCCCeEEEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHHHHHh
Q 007647 79 KTYPQRLQER---I---QELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKF 152 (595)
Q Consensus 79 ~~~~~~l~~~---~---~~~P~V~V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~ 152 (595)
.+++++|+.+ + .++|.|||||+|.+|.+|||.++.+||.|+|+.|||.||+.|||+|||++..|+++|.||++|
T Consensus 267 ~t~~drL~~r~e~~~~~~~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~F 346 (1044)
T PLN02915 267 ETYLDRLSMRFERDGEPNRLAPVDVFVSTVDPLKEPPIITANTVLSILAVDYPVDKVSCYVSDDGASMLLFDTLSETAEF 346 (1044)
T ss_pred ccCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceeEEEecCCchHhHHHHHHHHHHH
Confidence 9999999853 2 249999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhcccccCCcccccCC-CC-CCCCCchhhHHHHhhhH-----------------------------------
Q 007647 153 AKLWVPFCKKYNVQIRAPFRYFPD-SE-PSDSSSGELLQDWKNMK----------------------------------- 195 (595)
Q Consensus 153 a~~w~p~c~~~gv~~r~~~~~~~~-~~-~~~~~~~~~~~~~~~~k----------------------------------- 195 (595)
|+.|+||||||+|++|+||.||+. .+ .+++.+.+|++||+.||
T Consensus 347 Ak~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mKreYEe~K~RIe~l~~~~~~~~~~~~~m~dgt~W~g 426 (1044)
T PLN02915 347 ARRWVPFCKKHNIEPRAPEFYFSQKIDYLKDKVQPTFVKERRAMKREYEEFKVRINALVAKAQKKPEEGWVMQDGTPWPG 426 (1044)
T ss_pred HHhhcchhhhcCCCcCCHHHHhccCCCccccccCchhHHHHHHHHHHHHHHHHHHHHHHhhhccCCcccccccCCccCCC
Confidence 999999999999999999999994 33 34555679999999997
Q ss_pred -----------HHhhcCCCC---CCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEEcCCCCCCchHH
Q 007647 196 -----------VISENKGGL---SDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEI 261 (595)
Q Consensus 196 -----------v~~~~~~~~---~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl~~DAD~~~~~pd~ 261 (595)
|+++++++. +.++|+++||+|||||+.+||+||||||+.+|+|++++|++||+++||||++|||++
T Consensus 427 ~~~~dHp~IIqVll~~~~~~d~~g~~lP~LVYVSREKRP~~~Hh~KAGAMNaLlRVSavmTNaP~iLNlDCDmY~Nns~a 506 (1044)
T PLN02915 427 NNTRDHPGMIQVYLGSEGALDVEGKELPRLVYVSREKRPGYNHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYINNSKA 506 (1044)
T ss_pred CCCCCCccceEEeecCCCCcccccCccceeEEEecccCCCCCcchhhhhhhhHhhhhheeecCcEEEeeccccccCcchh
Confidence 333333321 347999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcCCCCCCcEEEEeCCcccc-----Cchhh-hHhhHhhhhhhhcccCCceeccccceeehhhhhcccchhhh-
Q 007647 262 VLQAMCLHLGSKNENEFAFIQSPQYFY-----DRPEN-LCILNEYIGKGIVGIQGPFYQGTGTFHRRDVVYGLCLDQIE- 334 (595)
Q Consensus 262 L~~~v~~f~d~~~d~~vg~VQ~pq~f~-----d~~~~-~~~f~~~~~~g~~~~~~~~~~Gtg~~~rr~al~g~~~~~~~- 334 (595)
++++||||+|++.++++||||+||+|+ |+|+| +++||++.+.|+||+|||+|+||||+|||+||||..|...+
T Consensus 507 ~r~AMCf~lD~~~g~~~afVQFPQrF~gidk~D~Y~n~~~Vffdi~~~GldGlqGP~YvGTGCffrR~aLYG~~pp~~~~ 586 (1044)
T PLN02915 507 VREAMCFLMDPQLGKKLCYVQFPQRFDGIDRHDRYANRNVVFFDINMKGLDGIQGPVYVGTGCVFNRQALYGYDPPVSEK 586 (1044)
T ss_pred hHhhceeeecCCCCCeeEEEeCCcccCCCCCCCCcCccceEEEeeecccccccCCcccccCCceeeeeeecCcCCccccc
Confidence 999999999999999999999999999 89999 99999999999999999999999999999999998553210
Q ss_pred ----------h---------------------------------------------------------------------
Q 007647 335 ----------H--------------------------------------------------------------------- 335 (595)
Q Consensus 335 ----------~--------------------------------------------------------------------- 335 (595)
.
T Consensus 587 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (1044)
T PLN02915 587 RPKMTCDCWPSWCCCCCGGGRRGKSKKSKKGKKGRRSLLGGLKKRKKKGGGGGSMMGKKYGRKKSQAVFDLEEIEEGLEG 666 (1044)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 0
Q ss_pred ----cc--chhHHHHHHhhCCcHHHHHHHHHhhcCCcCCCCCchhhhHHHHhHhhccccccCCCcCccccCCCCCccchH
Q 007647 336 ----QG--NIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDN 409 (595)
Q Consensus 336 ----~~--~~~~~~~~~~~g~s~~f~~s~~~~~r~~~~~~~~~~~~~~~~~~~vg~c~ye~~~~w~~~~G~~~~~itED~ 409 (595)
+. .+..+.+..+||+|..|+.|+....++. ..+.+.++.++++++|.+|.||++|.||+||||.|+++|||+
T Consensus 667 ~~~~~~~~~~~~~~~~~~fG~S~~fi~S~~~~~~~~--~~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTEDv 744 (1044)
T PLN02915 667 YDELEKSSLMSQKNFEKRFGQSPVFIASTLMEDGGL--PEGTNPAALIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDI 744 (1044)
T ss_pred ccchhhhhhhhhhhhhhhcCCcHHHHHHHHHhhcCC--CCCCCcHHHHHHHHhccccCCCccCchhHhhCccccccccHH
Confidence 00 0223456678999999999998654432 234566789999999999999999999999999999999999
Q ss_pred HHHHHHHhCCcEEEEeCCCCcceeccCCCCHHHHHHHHHHhhhhhHHHHHhhcchhhhhccCCCCHHHHHHhHHhhhhhh
Q 007647 410 LTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGL 489 (595)
Q Consensus 410 ~t~~~l~~~Gwr~~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G~~q~~~~~~~pl~~~~~~~l~~~qrl~y~~~~~~~~ 489 (595)
.||++||++||||+|++|+++++.|.+|+|+.++++||+||++|++|+++++++|++.+..++|++.||++|+++++||+
T Consensus 745 ~TG~rLH~rGWrSvY~~p~r~AF~GlAP~~L~d~L~Qr~RWA~G~lqIf~sr~~Pl~~g~~~~L~l~QRL~Yl~~~~yp~ 824 (1044)
T PLN02915 745 LTGFKMHCRGWKSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFMSRHCPLWYAYGGKLKWLERLAYINTIVYPF 824 (1044)
T ss_pred HHHHHHHccCCcEEeeCCCcHHhcCcCCCCHHHHHHHHHHHhhhHHHHHHhccCCcccccCCCCCHHHHHHHHHHHHHHH
Confidence 99999999999999998777889999999999999999999999999999999999965448999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHhCCccccccChhhHHHHHHHHHHHHHHHHHHHHHhCCccchhhhhhhHHHHHHHHHHHHHHHH
Q 007647 490 RSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVNNCMARIVTTSAWLFGLVN 569 (595)
Q Consensus 490 ~~~~~l~~~~~p~~~l~~g~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~w~~~~~~~i~~~~~~~~~~~~ 569 (595)
.+++.++|+++|++||++|++++|.++.....+++++|++++++++++++|+|.++++||++||+|+|.+++++++++++
T Consensus 825 ~slp~liY~llP~l~LLtG~~i~P~~s~~~~~~f~~lfls~~~~~lLE~~wsG~si~~WWrnQq~w~I~~tSa~Lfavl~ 904 (1044)
T PLN02915 825 TSIPLLAYCTIPAVCLLTGKFIIPTLNNLASIWFLALFLSIIATSVLELRWSGVSIEDLWRNEQFWVIGGVSAHLFAVFQ 904 (1044)
T ss_pred HHHHHHHHHHHHHHHHHcCCcccCccchHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhhhhHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999987776666778889999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCeeeCcCCCCC
Q 007647 570 AALEQFGFSEAVFEITQKIHRS 591 (595)
Q Consensus 570 ~~~~~l~~~~~~F~vT~K~~~~ 591 (595)
+++|.|++++++|+||+|+...
T Consensus 905 ~iLKvLg~se~~F~VTsK~~d~ 926 (1044)
T PLN02915 905 GLLKVLGGVDTNFTVTSKAADD 926 (1044)
T ss_pred HHHHHhcccCCcceecCCcccc
Confidence 9999999999999999998653
No 8
>PLN02248 cellulose synthase-like protein
Probab=100.00 E-value=5.7e-128 Score=1090.30 Aligned_cols=585 Identities=36% Similarity=0.606 Sum_probs=519.6
Q ss_pred CCCCCCCceeeeecCchh---HHHHHHHHHHHHHHHHHHHhhcccc-chhhHHHHHHHHHHHHHHHHHHHHHhhcccccc
Q 007647 4 TKSSCLPLYEKVFHKNTY---HRALDVIILFLLLCLLFYRLSTLKN-HGFAWFLAFLCESCFTFIWILIVNCKWTPLTYK 79 (595)
Q Consensus 4 ~~~~~~~l~~~~~~~~~~---~r~~~~~~~~~~~~yl~wR~~~~~~-~~~~w~~~~~~e~~~~~~~~l~~~~~~~p~~r~ 79 (595)
+.++++||++++++++++ +|+++++.+++++.+|+||+++... ..++|+++++||+||+++|+|.|+.||.|++|.
T Consensus 263 ~~~~~~pL~~~~~i~~~il~pyRl~~~~rlv~l~~fl~~Ri~~~~~~~~~~W~~s~~cE~WFaf~Wll~q~~Kw~Pv~R~ 342 (1135)
T PLN02248 263 MDKPWRPLTRKVKISAAILSPYRLLILIRLVVLGLFLTWRVRNPNEDAMWLWGMSVVCEIWFAFSWLLDQLPKLCPINRA 342 (1135)
T ss_pred cccCCCCceeeeecCcccccHHHHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHHHHHhccccccccccc
Confidence 456789999999999995 9999999999999999999999432 247899999999999999999999999999999
Q ss_pred CCccchhhcc-----------CCCCCeEEEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHH
Q 007647 80 TYPQRLQERI-----------QELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVE 148 (595)
Q Consensus 80 ~~~~~l~~~~-----------~~~P~V~V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e 148 (595)
+++++|.++- .++|.|||||+|.++++|||.++.+||.|+|+.|||.+|+.|||+|||++..|+++|.|
T Consensus 343 t~~~rL~~r~e~~~~~~p~g~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKLacYvSDDGgS~LTf~AL~E 422 (1135)
T PLN02248 343 TDLAVLKEKFETPSPSNPTGRSDLPGIDVFVSTADPEKEPPLVTANTILSILAADYPVEKLACYLSDDGGALLTFEAMAE 422 (1135)
T ss_pred cCHHHHHHHhccccccCCCCcccCCcceeEeecCCCccCcchHHHHHHHHHhcccccccceeEEEecCCchHHHHHHHHH
Confidence 9999997642 36999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhhhhhhhcccccCCcccccCC-CCC-CCCCchhhHHHHhhhH-------HHhhc-------------------
Q 007647 149 ASKFAKLWVPFCKKYNVQIRAPFRYFPD-SEP-SDSSSGELLQDWKNMK-------VISEN------------------- 200 (595)
Q Consensus 149 ~~~~a~~w~p~c~~~gv~~r~~~~~~~~-~~~-~~~~~~~~~~~~~~~k-------v~~~~------------------- 200 (595)
|++||+.|+||||||+|++|+||.||+. .++ +++.+.+|++||+.|| +.+++
T Consensus 423 Aa~FA~~WVPFCrKh~IepRaPe~YFs~~~~~~~~~~~~~F~~d~r~~KreYee~K~RIe~l~~~~~~rs~~~n~~~e~~ 502 (1135)
T PLN02248 423 AASFARIWVPFCRKHDIEPRNPESYFSLKRDPTKNKVRPDFVKDRRRVKREYDEFKVRINGLPDSIRRRSDAYNAREEIK 502 (1135)
T ss_pred HHHHHHhhcchhhhcCCCcCCHHHHhccCCCcccCccchhHHHHHHHHHHHHHHHHHHHHhhhhhccccccccchhHHHH
Confidence 9999999999999999999999999983 343 3556789999998887 10000
Q ss_pred ---------------------------------------------------------CC-----------C------CCC
Q 007647 201 ---------------------------------------------------------KG-----------G------LSD 206 (595)
Q Consensus 201 ---------------------------------------------------------~~-----------~------~~~ 206 (595)
++ + .+.
T Consensus 503 ~~~~~~~~~~~~~~e~~~~~~~~wm~dgt~wpg~W~~~~~~~~~~dH~~IIqVll~~p~~e~~~g~~~~~~~~d~~~~d~ 582 (1135)
T PLN02248 503 AKKKQRESGGGDPSEPLKVPKATWMADGTHWPGTWLSSAPDHSRGDHAGIIQVMLKPPSDEPLMGSADDENLIDFTDVDI 582 (1135)
T ss_pred hhhhhhhhcccccccccccccceeeccCCcCCCcccCcccCCCCCCCcceeEEeccCCCcccccCccccccccccccccc
Confidence 00 0 011
Q ss_pred CCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEEcCCCCCCchHHHHHHHhhhcCCCCCCcEEEEeCCcc
Q 007647 207 EIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQY 286 (595)
Q Consensus 207 ~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl~~DAD~~~~~pd~L~~~v~~f~d~~~d~~vg~VQ~pq~ 286 (595)
++|+++||+|||||+.+||+||||||+.+|+|++++|+|||+++||||++|+|++++++||||+|++ ++++||||+||+
T Consensus 583 ~lP~LVYVSREKRPg~~Hh~KAGAMNALlRVSavmTNgPfILNLDCDmYiNns~alr~AMCf~lD~~-g~~vAfVQFPQr 661 (1135)
T PLN02248 583 RLPMLVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYIYNSLAIREGMCFMMDRG-GDRICYVQFPQR 661 (1135)
T ss_pred ccceeEEEecccCCCCCcccccchhhhHHHhhhhccCCCeEEEeccCcccCCchhHHhcchheecCC-CCceEEEcCCcc
Confidence 6999999999999999999999999999999999999999999999999999999999999999986 899999999999
Q ss_pred cc-----Cchhh-hHhhHhhhhhhhcccCCceeccccceeehhhhhcccchhhhh-------------cc----------
Q 007647 287 FY-----DRPEN-LCILNEYIGKGIVGIQGPFYQGTGTFHRRDVVYGLCLDQIEH-------------QG---------- 337 (595)
Q Consensus 287 f~-----d~~~~-~~~f~~~~~~g~~~~~~~~~~Gtg~~~rr~al~g~~~~~~~~-------------~~---------- 337 (595)
|+ |+|+| +++||+++++|+||+||++||||||+|||+||||..+..++. ..
T Consensus 662 F~~I~k~D~Ygn~~~Vffdi~~~GlDGlqGP~YvGTGCffRR~ALYG~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 741 (1135)
T PLN02248 662 FEGIDPSDRYANHNTVFFDVNMRALDGLQGPVYVGTGCLFRRIALYGFDPPRAKEHSGCFGSCKFTKKKKKETSASEPEE 741 (1135)
T ss_pred cCCCCCCCccCCcceeeeeeeeccccccCCccccccCceeeehhhcCcCCcccccccccccccccccccccccccccccc
Confidence 99 89999 999999999999999999999999999999999986654310 00
Q ss_pred --------chhHHHHHHhhCCcHHHHHHHHHhh-cCCcCCC-----------------CCchhhhHHHHhHhhccccccC
Q 007647 338 --------NIVEDELLKKFGNSKEFIKSAAQTL-EGKTGGY-----------------SSNISRSLDEAHRVADCGYEYG 391 (595)
Q Consensus 338 --------~~~~~~~~~~~g~s~~f~~s~~~~~-r~~~~~~-----------------~~~~~~~~~~~~~vg~c~ye~~ 391 (595)
......+.++||+|..|+.|+..+. ++.+... .....++++++++|.+|.||++
T Consensus 742 ~~~~~~~~~~~~~~~~~rfG~S~~fi~S~~~a~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~eA~~V~sC~YE~~ 821 (1135)
T PLN02248 742 QPDLEDDDDLELSLLPKRFGNSTMFAASIPVAEFQGRPLADHPSVKNGRPPGALTVPREPLDAATVAEAISVISCWYEDK 821 (1135)
T ss_pred cccccccchhhhhhhhhhhccchhhhhhhHHHhhcccccccccccccccccccccccccCCcHHHHHHHHhhcccccccC
Confidence 0123344568999999999987554 3332210 1123467899999999999999
Q ss_pred CCcCccccCCCCCccchHHHHHHHHhCCcEEEEeCCCCcceeccCCCCHHHHHHHHHHhhhhhHHHHHhhcchhhhhccC
Q 007647 392 SSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIG 471 (595)
Q Consensus 392 ~~w~~~~G~~~~~itED~~t~~~l~~~Gwr~~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G~~q~~~~~~~pl~~~~~~ 471 (595)
|.||+||||.|+++|||+.||++||++||||+|++|+++++.|++|+|+.++++||+||++|++|+++++++|++.+ +
T Consensus 822 T~WG~evG~~YGSvTEDv~TGlrLH~rGWrSvY~~p~r~AF~GlAP~~L~d~L~Qr~RWA~G~lQIf~sr~~Pll~~--~ 899 (1135)
T PLN02248 822 TEWGDRVGWIYGSVTEDVVTGYRMHNRGWRSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLAS--R 899 (1135)
T ss_pred CchhhhcCeeecceechHHHHHHHHhcCCceEeCCCChHhhcCCCCCCHHHHHHHHHHHhhchHHHHhccCCccccC--C
Confidence 99999999999999999999999999999999998778899999999999999999999999999999989998875 7
Q ss_pred CCCHHHHHHhHHhhhhhhhHHHHHHHHHHHHHHHHhCCccccccChhhHHHHH-HHHHHHHHHHHHHHHHhCCccchhhh
Q 007647 472 KLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPL-ALFLIYKLYTLLEYIQAGLSIRSWWV 550 (595)
Q Consensus 472 ~l~~~qrl~y~~~~~~~~~~~~~l~~~~~p~~~l~~g~~~~p~~~~~~~~~~~-~~~l~~~~~~~~~~~~~g~~~~~~w~ 550 (595)
+|++.||++|+++++||+.+++.++|+++|++||++|++++|.. ++++++++ .++++++++.+++++|+|.++++|||
T Consensus 900 ~Lsl~QRL~Yl~~~lypf~Slp~liY~llP~l~LLtGi~~~p~~-~~~fl~yll~l~l~~~~~sllE~~wsGvsl~~WWr 978 (1135)
T PLN02248 900 RLKFLQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVQTL-NVTFLVYLLIITITLCLLAVLEIKWSGITLEEWWR 978 (1135)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccc-cHHHHHHHHHHHHHHHHHHHHHHhhccccHHHHhh
Confidence 99999999999999999999999999999999999999999985 45666555 44677889999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCcCCCCCc
Q 007647 551 NNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEITQKIHRSQ 592 (595)
Q Consensus 551 ~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~F~vT~K~~~~~ 592 (595)
+||+|+|.++++++++++++++|+|++++++|.||+|+.+.+
T Consensus 979 nQq~W~I~~tSA~L~A~l~aiLKvLggs~~~F~VTsK~~~~d 1020 (1135)
T PLN02248 979 NEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSAGDD 1020 (1135)
T ss_pred hhheeeehhhHHHHHHHHHHHHHHhcCccccceeCCcccccc
Confidence 999999999999999999999999999999999999987654
No 9
>PLN02893 Cellulose synthase-like protein
Probab=100.00 E-value=1.2e-125 Score=1052.21 Aligned_cols=568 Identities=35% Similarity=0.599 Sum_probs=502.4
Q ss_pred CCCCCCCCCceeeeecCch-hHHHHHHHHHHHHHHHHHHHhhccccch--hhHHHHHHHHHHHHHHHHHHHHHhhccccc
Q 007647 2 ANTKSSCLPLYEKVFHKNT-YHRALDVIILFLLLCLLFYRLSTLKNHG--FAWFLAFLCESCFTFIWILIVNCKWTPLTY 78 (595)
Q Consensus 2 ~~~~~~~~~l~~~~~~~~~-~~r~~~~~~~~~~~~yl~wR~~~~~~~~--~~w~~~~~~e~~~~~~~~l~~~~~~~p~~r 78 (595)
+......+||||+++.+++ .+|+++++++++++.+|+||+.+.+... +.|+++++||+|++++|++.|+.||+|++|
T Consensus 5 ~~~~~~~~pL~~~~~~~~~~~~R~~~~~~~~~i~~ll~~r~~~~~~~~~~~~w~~~~~~e~wf~f~W~l~q~~k~~Pv~r 84 (734)
T PLN02893 5 TTASTGAPPLHTCHPMRRTIANRVFAVVYSCAILALLYHHVIALLHSTTTLITLLLLLADIVLAFMWATTQAFRMCPVHR 84 (734)
T ss_pred ccCCCCCCCceeeeecCCchHHHHHHHHHHHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHHHccCcccccccc
Confidence 4556678899999999999 6999999999999999999998887653 689999999999999999999999999999
Q ss_pred cCCccchhhc--cCCCCCeEEEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhh
Q 007647 79 KTYPQRLQER--IQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLW 156 (595)
Q Consensus 79 ~~~~~~l~~~--~~~~P~V~V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w 156 (595)
.+++++|+.+ .+++|.|||||||.+|.+|||.++.+|+.|+++.|||.||+.|||+|||++..|+++|.||++||+.|
T Consensus 85 ~~~~~~L~~~~~~~~lP~vDvfv~TaDP~~Epp~~~~ntvLSilA~dyp~~kls~YvSDDGgs~lt~~al~Eaa~FA~~W 164 (734)
T PLN02893 85 RVFIEHLEHYAKESDYPGLDVFICTADPYKEPPMGVVNTALSVMAYDYPTEKLSVYVSDDGGSKLTLFAFMEAAKFATHW 164 (734)
T ss_pred ccCHHHHhhhcccccCCcceeeeccCCcccCchHHHHHHHHHHHhhccCccceEEEEecCCccHHHHHHHHHHHHHHHhh
Confidence 9999999853 45799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhcccccCCcccccCCCCCCCC-CchhhHHHHhhhH----------------------------------------
Q 007647 157 VPFCKKYNVQIRAPFRYFPDSEPSDS-SSGELLQDWKNMK---------------------------------------- 195 (595)
Q Consensus 157 ~p~c~~~gv~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~k---------------------------------------- 195 (595)
+||||||+|++|+||.||+...++.. ......+|++++|
T Consensus 165 vPFCrk~~ie~R~P~~YF~~~~~~~~~e~~~~k~~Yee~k~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~~~~dH~~ 244 (734)
T PLN02893 165 LPFCKKNKIVERCPEAYFSSNSHSWSPETEQIKMMYESMKVRVENVVERGKVSTDYITCDQEREAFSRWTDKFTRQDHPT 244 (734)
T ss_pred cccccccCCCcCCHHHHhccCCCccchHHHHHHHHHHHHHHHHHHHHhcCcCchhhhhhcccccccccCcCCCCCCCCCc
Confidence 99999999999999999984321111 1111112233333
Q ss_pred ---HHhhcCCCC---CCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEEcCCCCCCchHHHHHHHhhh
Q 007647 196 ---VISENKGGL---SDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLH 269 (595)
Q Consensus 196 ---v~~~~~~~~---~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl~~DAD~~~~~pd~L~~~v~~f 269 (595)
|+++++++. +.++|+++|++||||||.+||+||||||+++++|++++|||||+++||||++|+|++|+++||||
T Consensus 245 ivqV~l~~~~~~d~~g~~lP~lvYvsReKrp~~~Hh~KAGaLN~llrvS~~~TngpfIl~lDcD~y~n~p~~l~~amcff 324 (734)
T PLN02893 245 VIQVLLESGKDKDITGHTMPNLIYVSREKSKNSPHHFKAGALNTLLRVSATMTNAPIILTLDCDMYSNDPQTPLRALCYL 324 (734)
T ss_pred eeeeeccCCCccchhhccCCceEEEeCCCCCCCCcccccchHHHHHHhhcccCCCCEEEEecCCcCCCchhHHHHHHHHh
Confidence 223322211 23799999999999999999999999999999999999999999999999988999999999999
Q ss_pred cCCCCCCcEEEEeCCcccc-----Cchhh-hHhhHhhhhhhhcccCCceeccccceeehhhhhcccchhhhhccchhHHH
Q 007647 270 LGSKNENEFAFIQSPQYFY-----DRPEN-LCILNEYIGKGIVGIQGPFYQGTGTFHRRDVVYGLCLDQIEHQGNIVEDE 343 (595)
Q Consensus 270 ~d~~~d~~vg~VQ~pq~f~-----d~~~~-~~~f~~~~~~g~~~~~~~~~~Gtg~~~rr~al~g~~~~~~~~~~~~~~~~ 343 (595)
+|++.|+++|+||+||+|+ |++++ +++||+++++|+||+||++||||||++||+||||..+..... ...+
T Consensus 325 ~Dp~~~~~vafVQfPQ~F~~i~~~D~y~~~~~vff~~~~~glDG~~gp~y~GTGc~~RR~al~G~~~~~~~~----~~~~ 400 (734)
T PLN02893 325 LDPSMDPKLGYVQFPQIFHGINKNDIYAGELKRLFQINMIGMDGLAGPNYVGTGCFFRRRVFYGGPSSLILP----EIPE 400 (734)
T ss_pred cCCCcCCceEEEeCcccccCCCcCCCCcchhHHHHHHHhhcccccCCceeeccceEEEHHHhcCCCccccch----hhhh
Confidence 9998899999999999999 88888 999999999999999999999999999999999975421000 0001
Q ss_pred HHHhhCCcHHHHHHHHHhhcCCcCCCCCchhhhHHHHhHhhccccccCCCcCccccCCCCCccchHHHHHHHHhCCcEEE
Q 007647 344 LLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSG 423 (595)
Q Consensus 344 ~~~~~g~s~~f~~s~~~~~r~~~~~~~~~~~~~~~~~~~vg~c~ye~~~~w~~~~G~~~~~itED~~t~~~l~~~Gwr~~ 423 (595)
++.+... .......+.++++++|.+|.||++|.||+++||.++++|||+.||++||++|||++
T Consensus 401 ----~~~~~~~-------------~~~~~~~~~~~~a~~v~sC~ye~~t~WG~~~G~~ygsvtED~~Tg~~lh~~GWrSv 463 (734)
T PLN02893 401 ----LNPDHLV-------------DKSIKSQEVLALAHHVAGCNYENQTNWGSKMGFRYGSLVEDYYTGYRLQCEGWKSI 463 (734)
T ss_pred ----ccccccc-------------ccccchHHHHHHhhhccccccccCCccccccceEeccccccHHHHHHHHhcCCcEE
Confidence 1111000 01223456778899999999999999999999999999999999999999999999
Q ss_pred EeCCCCcceeccCCCCHHHHHHHHHHhhhhhHHHHHhhcchhhhhccCCCCHHHHHHhHHhhhhhhhHHHHHHHHHHHHH
Q 007647 424 YCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAY 503 (595)
Q Consensus 424 y~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G~~q~~~~~~~pl~~~~~~~l~~~qrl~y~~~~~~~~~~~~~l~~~~~p~~ 503 (595)
|++|+++++.|++|+|+.++++||+||++|++|++++++||++.+ .++|++.||++|++.++|++.+++.++|+++|++
T Consensus 464 Y~~p~~~af~G~aP~~l~~~l~Q~~RWa~G~lqI~~s~~nPl~~g-~~~L~~~Qrl~Y~~~~~~~~~slp~liY~~~P~l 542 (734)
T PLN02893 464 FCNPKRPAFLGDSPINLHDVLNQQKRWSVGLLEVAFSKYSPITFG-VKSIGLLMGLGYAHYAFWPIWSIPITIYAFLPQL 542 (734)
T ss_pred ecCCCchhhccCCCCCHHHHHHHHHHHHhhhHHHHhhccCchhhc-ccCCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 998777788999999999999999999999999999999999975 3789999999999999999999999999999999
Q ss_pred HHHhCCccccccChhhHHHHHHHHHHHHHHHHHHHHHhCCccchhhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCee
Q 007647 504 CIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFE 583 (595)
Q Consensus 504 ~l~~g~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~~~w~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~F~ 583 (595)
||++|++++|+++.+|+++++++++++++++++|++++|.++++|||+|++|+|.++++++++++++++|.||+++.+|+
T Consensus 543 ~Ll~g~~i~p~~s~~~f~~yi~l~~s~~~~~~lE~~~sG~t~~~WWn~qr~w~I~~~ss~l~a~l~~iLk~lg~s~~~F~ 622 (734)
T PLN02893 543 ALLNGVSIFPKASDPWFFLYIFLFLGAYGQDLLDFLLSGGTIQRWWNDQRMWMIRGLSSFLFGLVEFLLKTLGISTFGFN 622 (734)
T ss_pred HHHcCCcccccccHHHHHHHHHHHHHHHHHHHHHHhccCccHhhhcchheeeehHHHHHHHHHHHHHHHHHhcccCCcee
Confidence 99999999999999999989889999999999999999999999999999999999999999999999999999999999
Q ss_pred eCcCCCCC
Q 007647 584 ITQKIHRS 591 (595)
Q Consensus 584 vT~K~~~~ 591 (595)
||+|+.+.
T Consensus 623 VT~K~~~~ 630 (734)
T PLN02893 623 VTSKVVDE 630 (734)
T ss_pred ecCCCccc
Confidence 99998554
No 10
>PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals. The genes that synthesize cellulose in higher plants differ greatly from the well-characterised genes found in Acetobacter and Agrobacterium spp. More correctly designated as "cellulose synthase catalytic subunits", plant cellulose synthase (CesA) proteins are integral membrane proteins, approximately 1,000 amino acids in length. There are a number of highly conserved residues, including several motifs shown to be necessary for processive glycosyltransferase activity [].; GO: 0016760 cellulose synthase (UDP-forming) activity, 0030244 cellulose biosynthetic process, 0016020 membrane
Probab=100.00 E-value=6.6e-117 Score=974.80 Aligned_cols=494 Identities=49% Similarity=0.828 Sum_probs=455.6
Q ss_pred eEEEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhcccccCCccccc
Q 007647 95 VDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 174 (595)
Q Consensus 95 V~V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~r~~~~~~ 174 (595)
|||||+|.||++|||.++.+||.|++++|||.+|+.|||+|||+++.|+++|.||++|||.|+||||||+|++|+||.||
T Consensus 1 vDvFv~TaDP~~EPp~~~~nTvLS~lA~dYP~~kls~YvSDDg~s~ltf~al~Ea~~FA~~WvPFCkk~~ie~R~P~~YF 80 (720)
T PF03552_consen 1 VDVFVCTADPEKEPPLVTANTVLSILAYDYPVEKLSCYVSDDGGSMLTFYALMEAAKFAKHWVPFCKKYNIEPRAPEAYF 80 (720)
T ss_pred CceEEecCCCCcCCCeeeHHHHHHHHhhcCCccceeEEEecCCchHHHHHHHHHHHHHHhhhcchhhccCCccCCHHHHh
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CC-CC-CCCCCchhhHHHHhhhH----------------------------------------------HHhhcCCCC--
Q 007647 175 PD-SE-PSDSSSGELLQDWKNMK----------------------------------------------VISENKGGL-- 204 (595)
Q Consensus 175 ~~-~~-~~~~~~~~~~~~~~~~k----------------------------------------------v~~~~~~~~-- 204 (595)
+. .+ .+++...+|++||++|| |+++++++.
T Consensus 81 ~~~~~~~~~~~~~~f~~e~~~~k~~ye~~k~ri~~~~~~~~~~~~~~~~~~~~~~w~~~~~~dH~~iiqv~~~~~~~~~~ 160 (720)
T PF03552_consen 81 SSKIDPLKDKVQPEFVKERRAMKREYEEFKVRIEALVAKIQKVPEEGWTMQDGTPWPGNTRRDHPGIIQVLLDNPGGKDV 160 (720)
T ss_pred ccCCCcccCCcChhHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccceeccCCCcCCCCCCcCChhheEeeccCCCCccc
Confidence 94 33 34556789999999888 222222221
Q ss_pred -CCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEEcCCCCCCchHHHHHHHhhhcCCCCCCcEEEEeC
Q 007647 205 -SDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQS 283 (595)
Q Consensus 205 -~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl~~DAD~~~~~pd~L~~~v~~f~d~~~d~~vg~VQ~ 283 (595)
++++|+++||+|||||+.+||+||||||+.+|+|++++|+|||+++||||++|||+.++++||||+|+..++++||||+
T Consensus 161 ~g~~lP~lvYvsREKrp~~~Hh~KAGAmNaL~RvSa~~tN~p~iLnlDcD~y~nn~~~~~~amc~~~d~~~g~~~~~vQf 240 (720)
T PF03552_consen 161 DGNELPMLVYVSREKRPGYPHHFKAGAMNALLRVSAVMTNAPFILNLDCDMYINNSQALREAMCFFMDPKIGKKIAFVQF 240 (720)
T ss_pred ccCcCCeEEEEeccCCCCCCchhhhcccccccccceeecCCCEEEEecccccccchHHHHHHHHhhccCCCCCeeEEEeC
Confidence 3579999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Ccccc-----Cchhh-hHhhHhhhhhhhcccCCceeccccceeehhhhhcccchhhhhc---------------------
Q 007647 284 PQYFY-----DRPEN-LCILNEYIGKGIVGIQGPFYQGTGTFHRRDVVYGLCLDQIEHQ--------------------- 336 (595)
Q Consensus 284 pq~f~-----d~~~~-~~~f~~~~~~g~~~~~~~~~~Gtg~~~rr~al~g~~~~~~~~~--------------------- 336 (595)
||+|+ |+|+| +++||+++++|+||+|||+|+||||++||+||||..++..+..
T Consensus 241 pq~f~~i~~~d~y~~~~~~~~~~~~~g~dG~~gp~y~Gtgc~~rR~al~g~~~~~~~~~~~~~~~~~~~c~~~~k~~~~~ 320 (720)
T PF03552_consen 241 PQRFDGIDKNDRYGNQNRVFFDINMRGLDGLQGPFYVGTGCFFRREALYGFDPPRYEKDPEKTCCCCSCCFGRRKKKKSK 320 (720)
T ss_pred CceeCCCCcCCCCCccceeeeeccccccccCCCceeeecCcceechhhhCCCCCchhcccCcceeeeecccCCccccccc
Confidence 99999 89999 9999999999999999999999999999999999877541100
Q ss_pred -----------------------------------cchhHHHHHHhhCCcHHHHHHHHHhhcCCcCCCCCchhhhHHHHh
Q 007647 337 -----------------------------------GNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAH 381 (595)
Q Consensus 337 -----------------------------------~~~~~~~~~~~~g~s~~f~~s~~~~~r~~~~~~~~~~~~~~~~~~ 381 (595)
..+..++++++||+|++|+.|+..+-.+ .+...+.++.+++++
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~FG~S~~fi~S~~~~~~~--~~~~~~~~~~L~EA~ 398 (720)
T PF03552_consen 321 KKPKKRASKRRESSSPIFALEDIEEGAEGSDEERSSLMSQKELEKKFGQSPEFIASTLMAQGG--VPRSPSPASLLEEAI 398 (720)
T ss_pred ccchhccccccccccccccccccccccccchhhhhhcchhHHHHHHhcCCHHHHHHHHHHhcC--CCCCCChHHHHHHHH
Confidence 0024467789999999999998754322 233556678889999
Q ss_pred HhhccccccCCCcCccccCCCCCccchHHHHHHHHhCCcEEEEeCCCCcceeccCCCCHHHHHHHHHHhhhhhHHHHHhh
Q 007647 382 RVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSK 461 (595)
Q Consensus 382 ~vg~c~ye~~~~w~~~~G~~~~~itED~~t~~~l~~~Gwr~~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G~~q~~~~~ 461 (595)
+|.+|.||++|+||+||||.|+++|||+.||++||++||||+|++|++++|.|.||+|+.+.+.|++||+.|.+|+++++
T Consensus 399 ~V~sC~YE~~T~WGkevGwiYGSvtEDv~TG~rmH~rGWrSvYc~p~r~AF~G~AP~nL~d~L~Q~~RWA~GslEI~fSr 478 (720)
T PF03552_consen 399 HVASCGYEDKTEWGKEVGWIYGSVTEDVLTGFRMHCRGWRSVYCNPKRPAFLGSAPINLSDRLHQVKRWATGSLEIFFSR 478 (720)
T ss_pred HHhcCCccccCCcccccceEEEecccccccceeEeeCceeeEEeccccchhcccCCCChhhhceeeeeEeeeeEeeehhc
Confidence 99999999999999999999999999999999999999999999999899999999999999999999999999999999
Q ss_pred cchhhhhccCCCCHHHHHHhHHhhhhhhhHHHHHHHHHHHHHHHHhCCccccccChhhHHHHHHHHHHHHHHHHHHHHHh
Q 007647 462 RNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQA 541 (595)
Q Consensus 462 ~~pl~~~~~~~l~~~qrl~y~~~~~~~~~~~~~l~~~~~p~~~l~~g~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 541 (595)
+||+++++.++|++.||++|++.++|++.++|.++|+++|++||++|++++|+++++++++++.+|+++++++++|++|+
T Consensus 479 ~~Pl~~g~~~rL~~lQrLaY~~~~~ypl~Sipll~Y~~lPalcLLtG~~i~Pk~s~~~~~~f~~lf~~~~~~~llE~~ws 558 (720)
T PF03552_consen 479 HCPLWYGYGGRLKFLQRLAYLNYMLYPLTSIPLLCYCFLPALCLLTGIFIFPKVSSPWFIYFLALFVSIYAYSLLEFRWS 558 (720)
T ss_pred CCchhccCCCCCcHHHHHHHHHHhhhHHHHHHHHHHHHhHHHHhhCCCcccCccccchhHHHHHHHHHHHHHHHHHHHhc
Confidence 99999976689999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccchhhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCcCCCC
Q 007647 542 GLSIRSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEITQKIHR 590 (595)
Q Consensus 542 g~~~~~~w~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~F~vT~K~~~ 590 (595)
|.++++|||+||+|+|.++++|++|++++++|+||+++++|.||+|...
T Consensus 559 G~si~~WWrnQq~W~I~~tSa~LfAvl~~iLK~lg~s~t~F~VTsK~~d 607 (720)
T PF03552_consen 559 GVSIREWWRNQQFWMIGGTSAHLFAVLQGILKVLGGSETSFTVTSKVSD 607 (720)
T ss_pred cCcHHHhhcccceeeehhhHHHHHHHHHHHHHHHcCCccceeecccccc
Confidence 9999999999999999999999999999999999999999999999876
No 11
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional
Probab=100.00 E-value=1.8e-65 Score=586.97 Aligned_cols=415 Identities=22% Similarity=0.331 Sum_probs=334.0
Q ss_pred chhHHHHH-HHHHHHHHHHHHHHhhccccchh-----hHHHHHHHHHHHHHHHHHHHHHhhccccccCCccchhhccCCC
Q 007647 19 NTYHRALD-VIILFLLLCLLFYRLSTLKNHGF-----AWFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQERIQEL 92 (595)
Q Consensus 19 ~~~~r~~~-~~~~~~~~~yl~wR~~~~~~~~~-----~w~~~~~~e~~~~~~~~l~~~~~~~p~~r~~~~~~l~~~~~~~ 92 (595)
+.+.+++. ++.+++.++|++||++.|+|.+. ..++++++|+++.+..++.++....|..|++. .++...+.+
T Consensus 182 ~~~~~~~l~~l~~~~~~rY~~WR~~~tL~~~~~~~~~~~~~ll~ae~~~~~~~~lg~~~~~~~~~r~~~--~~~~~~~~~ 259 (852)
T PRK11498 182 GRFSALMLIVLSLTVSCRYIWWRYTSTLNWDDPVSLVCGLILLFAETYAWIVLVLGYFQVVWPLNRQPV--PLPKDMSLW 259 (852)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHheeeCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCC--CCCcccCCC
Confidence 44455444 45666679999999999998642 23567899999887777766655556666542 233335678
Q ss_pred CCeEEEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhcccccCCccc
Q 007647 93 PPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFR 172 (595)
Q Consensus 93 P~V~V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~r~~~~ 172 (595)
|+|||+||||| |+.+++++|+.+++++|||+++++|+|+|||++|+|.+. |+++
T Consensus 260 P~VsViIPtYN---E~~~vv~~tI~a~l~~dYP~~k~EViVVDDgS~D~t~~l--------------a~~~--------- 313 (852)
T PRK11498 260 PTVDIFVPTYN---EDLNVVKNTIYASLGIDWPKDKLNIWILDDGGREEFRQF--------------AQEV--------- 313 (852)
T ss_pred CcEEEEEecCC---CcHHHHHHHHHHHHhccCCCCceEEEEEeCCCChHHHHH--------------HHHC---------
Confidence 99999999999 777799999999999999999999999999999976422 2222
Q ss_pred ccCCCCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEEcC
Q 007647 173 YFPDSEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDC 252 (595)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl~~DA 252 (595)
+++|++|++ +.|+||||+|+|++ .++||||+++||
T Consensus 314 -------------------------------------~v~yI~R~~----n~~gKAGnLN~aL~----~a~GEyIavlDA 348 (852)
T PRK11498 314 -------------------------------------GVKYIARPT----HEHAKAGNINNALK----YAKGEFVAIFDC 348 (852)
T ss_pred -------------------------------------CcEEEEeCC----CCcchHHHHHHHHH----hCCCCEEEEECC
Confidence 457888875 56899999999999 689999999999
Q ss_pred CCCCCchHHHHHHHhhhcCCCCCCcEEEEeCCcccc--Cchhh-----------hHhhHhhhhhhhcccCCceeccccce
Q 007647 253 DMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFY--DRPEN-----------LCILNEYIGKGIVGIQGPFYQGTGTF 319 (595)
Q Consensus 253 D~~~~~pd~L~~~v~~f~d~~~d~~vg~VQ~pq~f~--d~~~~-----------~~~f~~~~~~g~~~~~~~~~~Gtg~~ 319 (595)
|+++ +||+|++++++|. +||++|+||+||.|+ |++++ .+.||+.++.|.+.+++.++||++++
T Consensus 349 D~ip-~pdfL~~~V~~f~---~dP~VglVQtp~~f~n~dp~~rnl~~~~~~~~e~~~fy~~iq~g~~~~~a~~~~Gs~av 424 (852)
T PRK11498 349 DHVP-TRSFLQMTMGWFL---KDKKLAMMQTPHHFFSPDPFERNLGRFRKTPNEGTLFYGLVQDGNDMWDATFFCGSCAV 424 (852)
T ss_pred CCCC-ChHHHHHHHHHHH---hCCCeEEEEcceeccCCchHHHhhHHHhhcccchhHHHHHHHhHHHhhcccccccceee
Confidence 9996 8999999999886 689999999999987 55432 35788999999999999999999999
Q ss_pred eehhhhhcccchhhhhccchhHHHHHHhhCCcHHHHHHHHHhhcCCcCCCCCchhhhHHHHhHhhccccccCCCcCcccc
Q 007647 320 HRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVG 399 (595)
Q Consensus 320 ~rr~al~g~~~~~~~~~~~~~~~~~~~~~g~s~~f~~s~~~~~r~~~~~~~~~~~~~~~~~~~vg~c~ye~~~~w~~~~G 399 (595)
+||+++. ++| |
T Consensus 425 iRReaLe-------------------------------------------------------eVG--------------G 435 (852)
T PRK11498 425 IRRKPLD-------------------------------------------------------EIG--------------G 435 (852)
T ss_pred eEHHHHH-------------------------------------------------------Hhc--------------C
Confidence 9999882 567 8
Q ss_pred CCCCCccchHHHHHHHHhCCcEEEEeCCCCcceeccCCCCHHHHHHHHHHhhhhhHHHHHhhcchhhhhccCCCCHHHHH
Q 007647 400 CLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCL 479 (595)
Q Consensus 400 ~~~~~itED~~t~~~l~~~Gwr~~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G~~q~~~~~~~pl~~~~~~~l~~~qrl 479 (595)
|++++++||++++++|+++||+++|++ .+.+.|++|+|++++++||.||++|++|+++ +++|++. +++++.||+
T Consensus 436 fd~~titED~dlslRL~~~Gyrv~yl~--~~~a~glaPesl~~~~~QR~RWarG~lQi~r-~~~pl~~---~gL~~~qRl 509 (852)
T PRK11498 436 IAVETVTEDAHTSLRLHRRGYTSAYMR--IPQAAGLATESLSAHIGQRIRWARGMVQIFR-LDNPLTG---KGLKLAQRL 509 (852)
T ss_pred CCCCccCccHHHHHHHHHcCCEEEEEe--ccceeEECCCCHHHHHHHHHHHHHHHHHHHH-HhChhcc---CCCCHHHHH
Confidence 999999999999999999999999997 3577899999999999999999999999996 5789886 899999999
Q ss_pred HhHHhhhhhhhHHHHHHHHHHHHHHHHhCCccccccChhhHHHHHHHHHHHHHHHHH-HHHHhCCccchhhhhhhHHHHH
Q 007647 480 AYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLL-EYIQAGLSIRSWWVNNCMARIV 558 (595)
Q Consensus 480 ~y~~~~~~~~~~~~~l~~~~~p~~~l~~g~~~~p~~~~~~~~~~~~~~l~~~~~~~~-~~~~~g~~~~~~w~~~~~~~i~ 558 (595)
+|++.+++++.+++.++|+++|++|+++|..++.. ++.. ++++++++++...+ ....+|.....||++ ++.
T Consensus 510 ~y~~~~l~~l~g~~~l~~l~~Pl~~l~~gi~~i~a---~~~~-i~~y~lP~~~~~~l~~~~~~g~~r~~~wse----iye 581 (852)
T PRK11498 510 CYANAMLHFLSGIPRLIFLTAPLAFLLLHAYIIYA---PALM-IALFVLPHMIHASLTNSRIQGKYRHSFWSE----IYE 581 (852)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCChheeC---ChHH-HHHHHHHHHHHHHHHHHHhcCcchHhHHHH----HHH
Confidence 99999999999999999999999999999766543 2222 23344555554333 333456556677865 456
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCeeeCcCCCCCccC
Q 007647 559 TTSAWLFGLVNAALEQFGFSEAVFEITQKIHRSQRC 594 (595)
Q Consensus 559 ~~~~~~~~~~~~~~~~l~~~~~~F~vT~K~~~~~~~ 594 (595)
++++++.+ ...+..++++++.+|+|||||+..++.
T Consensus 582 ~v~a~~l~-~~~~~~ll~p~~~~F~VTpKg~~~~~~ 616 (852)
T PRK11498 582 TVLAWYIA-PPTTVALFNPHKGKFNVTAKGGLVEEE 616 (852)
T ss_pred HHHHHHHH-HHHHHHHcCccCCCcccCCCCcccccc
Confidence 66676655 444555889999999999999876543
No 12
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming). Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.
Probab=100.00 E-value=2.7e-65 Score=587.19 Aligned_cols=428 Identities=24% Similarity=0.325 Sum_probs=342.8
Q ss_pred chhHHHHHHHHHH-HHHHHHHHHhhccccchh-----hHHHHHHHHHHHHHHHHHHHHHhhccccccCCccchhhccCCC
Q 007647 19 NTYHRALDVIILF-LLLCLLFYRLSTLKNHGF-----AWFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQERIQEL 92 (595)
Q Consensus 19 ~~~~r~~~~~~~~-~~~~yl~wR~~~~~~~~~-----~w~~~~~~e~~~~~~~~l~~~~~~~p~~r~~~~~~l~~~~~~~ 92 (595)
+++.|++.+...+ +.++|++||++.|++.+. ..++++++|+++.+..++..+..+.|.+|++.+. +..++.+
T Consensus 53 ~~~~~~~~~~~~~~~~~~y~~wr~~~tl~~~~~~~~~~~~~l~~~e~~~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~~ 130 (713)
T TIGR03030 53 GKRPRLLLLVLSVFISLRYLWWRLTETLPFDNTLNFIFGTLLLLAELYSITILLLGYFQTVRPLDRTPVPL--PLDPEEW 130 (713)
T ss_pred CchHHHHHHHHHHHHHHHHHHhheeeecCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCccCC--CCCcccC
Confidence 3445766664444 469999999999998642 2356789999988877777666666766654322 2235678
Q ss_pred CCeEEEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHHHHH----hhhhhhhhhhhcccccC
Q 007647 93 PPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASK----FAKLWVPFCKKYNVQIR 168 (595)
Q Consensus 93 P~V~V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~----~a~~w~p~c~~~gv~~r 168 (595)
|+|||+||+|| |+++++++|+.+++++|||+|+++|+|+||||+|+|.+...++++ -...+..+|++
T Consensus 131 P~VsViIP~yN---E~~~iv~~tl~s~~~~dYP~~~~eIiVvDDgStD~t~~~~~~~~~~~~~~~~~~~~l~~~------ 201 (713)
T TIGR03030 131 PTVDVFIPTYN---EDLEIVATTVLAAKNMDYPADKFRVWILDDGGTDQKRNDPDPEQAEAAQRREELKEFCRK------ 201 (713)
T ss_pred CeeEEEEcCCC---CCHHHHHHHHHHHHhCCCCccceEEEEEECcCCccccccchhhhhhhhhhHHHHHHHHHH------
Confidence 99999999999 777799999999999999999999999999999988533322111 00111222222
Q ss_pred CcccccCCCCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEE
Q 007647 169 APFRYFPDSEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFML 248 (595)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl 248 (595)
.+++|++|++ +.|+||||||+|++ .++||+|+
T Consensus 202 ----------------------------------------~~v~yi~r~~----n~~~KAgnLN~al~----~a~gd~Il 233 (713)
T TIGR03030 202 ----------------------------------------LGVNYITRPR----NVHAKAGNINNALK----HTDGELIL 233 (713)
T ss_pred ----------------------------------------cCcEEEECCC----CCCCChHHHHHHHH----hcCCCEEE
Confidence 2568898876 56899999999999 68999999
Q ss_pred EEcCCCCCCchHHHHHHHhhhcCCCCCCcEEEEeCCcccc--Cchhh-----------hHhhHhhhhhhhcccCCceecc
Q 007647 249 NVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFY--DRPEN-----------LCILNEYIGKGIVGIQGPFYQG 315 (595)
Q Consensus 249 ~~DAD~~~~~pd~L~~~v~~f~d~~~d~~vg~VQ~pq~f~--d~~~~-----------~~~f~~~~~~g~~~~~~~~~~G 315 (595)
++|||+++ +||+|++++++|. .|+++|+||+||.|+ |++++ ...||..++.|.+.++++++||
T Consensus 234 ~lDAD~v~-~pd~L~~~v~~f~---~dp~v~~Vqtp~~f~~p~~~~~nl~~~~~~~~e~~~f~~~i~~g~~~~~~~~~~G 309 (713)
T TIGR03030 234 IFDADHVP-TRDFLQRTVGWFV---EDPKLFLVQTPHFFVSPDPIERNLGTFRRMPNENELFYGLIQDGNDFWNAAFFCG 309 (713)
T ss_pred EECCCCCc-ChhHHHHHHHHHH---hCCCEEEEeCCeeccCCCHHhhhhHHHHHhhhHHHHHHHHHHHHHhhhCCeeecC
Confidence 99999996 8999999999996 689999999999988 44432 3578888999999999999999
Q ss_pred ccceeehhhhhcccchhhhhccchhHHHHHHhhCCcHHHHHHHHHhhcCCcCCCCCchhhhHHHHhHhhccccccCCCcC
Q 007647 316 TGTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWG 395 (595)
Q Consensus 316 tg~~~rr~al~g~~~~~~~~~~~~~~~~~~~~~g~s~~f~~s~~~~~r~~~~~~~~~~~~~~~~~~~vg~c~ye~~~~w~ 395 (595)
+++++||+++. ++|
T Consensus 310 s~~~iRR~al~-------------------------------------------------------~iG----------- 323 (713)
T TIGR03030 310 SAAVLRREALD-------------------------------------------------------EIG----------- 323 (713)
T ss_pred ceeEEEHHHHH-------------------------------------------------------HcC-----------
Confidence 99999999882 566
Q ss_pred ccccCCCCCccchHHHHHHHHhCCcEEEEeCCCCcceeccCCCCHHHHHHHHHHhhhhhHHHHHhhcchhhhhccCCCCH
Q 007647 396 DEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQF 475 (595)
Q Consensus 396 ~~~G~~~~~itED~~t~~~l~~~Gwr~~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G~~q~~~~~~~pl~~~~~~~l~~ 475 (595)
||++++++||++++++|+++||+++|++ ++.+.|++|+|++++++||.||++|++|+++ ..+|++. +++++
T Consensus 324 ---Gf~~~~vtED~~l~~rL~~~G~~~~y~~--~~~~~g~~p~sl~~~~~Qr~RWa~G~~qi~~-~~~pl~~---~gl~~ 394 (713)
T TIGR03030 324 ---GIAGETVTEDAETALKLHRRGWNSAYLD--RPLIAGLAPETLSGHIGQRIRWAQGMMQIFR-LDNPLLK---RGLSF 394 (713)
T ss_pred ---CCCCCCcCcHHHHHHHHHHcCCeEEEec--cccccccCCCCHHHHHHHHHHHhcChHHHHh-hhCcccc---CCCCH
Confidence 8999999999999999999999999997 4678899999999999999999999999996 4689886 89999
Q ss_pred HHHHHhHHhhhhhhhHHHHHHHHHHHHHHHHhCCccccccChhhHHHHHHHHHHHHHHHHHHH-HHhCCccchhhhhhhH
Q 007647 476 RQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEY-IQAGLSIRSWWVNNCM 554 (595)
Q Consensus 476 ~qrl~y~~~~~~~~~~~~~l~~~~~p~~~l~~g~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~-~~~g~~~~~~w~~~~~ 554 (595)
.||++|++++++|+.+++.++|+++|++++++|.++++.. . ..++++++++++.+++.+ ...|.....||++
T Consensus 395 ~qrl~y~~~~~~~~~~~~~~~~~~~P~~~l~~~~~~~~~~--~--~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~--- 467 (713)
T TIGR03030 395 PQRLCYLNAMLFWFFPLPRVIFLTAPLAYLFFGLNIFVAS--A--LEILAYALPHMLHSLLTNSYLFGRVRWPFWSE--- 467 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceeCC--H--HHHHHHHHHHHHHHHHHHHHHcCCeecchHHH---
Confidence 9999999999999999999999999999999998887762 1 223455677777776654 3466666788865
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCcCCCCCcc
Q 007647 555 ARIVTTSAWLFGLVNAALEQFGFSEAVFEITQKIHRSQR 593 (595)
Q Consensus 555 ~~i~~~~~~~~~~~~~~~~~l~~~~~~F~vT~K~~~~~~ 593 (595)
++..+.++ +.+...+.+++++++.+|+|||||+..++
T Consensus 468 -~~~~~~~~-~~~~~~~~~~~~~~~~~F~VT~Kg~~~~~ 504 (713)
T TIGR03030 468 -VYETVLAV-YLLPPVLVTLLNPKKPKFNVTPKGELLDE 504 (713)
T ss_pred -HHHHHHHH-HHHHHHHHHHhCcCCCCceecCCCccccc
Confidence 44555554 55566777789999999999999977554
No 13
>PRK05454 glucosyltransferase MdoH; Provisional
Probab=100.00 E-value=6.5e-40 Score=371.94 Aligned_cols=348 Identities=15% Similarity=0.112 Sum_probs=242.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhccccch-hhH---H------HHHHHHHHHHHHHHHHHHHhhc--cccccCCccchhhc
Q 007647 21 YHRALDVIILFLLLCLLFYRLSTLKNHG-FAW---F------LAFLCESCFTFIWILIVNCKWT--PLTYKTYPQRLQER 88 (595)
Q Consensus 21 ~~r~~~~~~~~~~~~yl~wR~~~~~~~~-~~w---~------~~~~~e~~~~~~~~l~~~~~~~--p~~r~~~~~~l~~~ 88 (595)
+.|++.+...++...|..|+...+++.+ ..| + +++..+.+.+...++.++...+ +..+...+..-+..
T Consensus 40 ~rr~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~lf~~~~~w~~~~~~~a~~g~~~~~~~~~~~~~~~~~~~~~~ 119 (691)
T PRK05454 40 LRRLILLGLTLAQTAVATWEMKAVLPYGGWTLLEPALLVLFALLFAWISLGFWTALMGFLQLLRGRDKYSISASAAGDPP 119 (691)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccCCcccccCCC
Confidence 4677777777778999999999888754 222 1 1223333322222222222211 11111111000111
Q ss_pred cCCCCCeEEEEeccCCCCCChhH----HHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhcc
Q 007647 89 IQELPPVDMFVTTADAELEPPII----TVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYN 164 (595)
Q Consensus 89 ~~~~P~V~V~IptynE~~Ep~~v----v~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~g 164 (595)
....|+|+|+||+|| |+++. ++.+++++.++||| ++++|+|+||+++|++...- + +.|..+|++++
T Consensus 120 ~~~~~~VaVliP~yN---Ed~~~v~~~L~a~~~Sl~~~~~~-~~~e~~vLdD~~d~~~~~~e-~-----~~~~~L~~~~~ 189 (691)
T PRK05454 120 PPPEARTAILMPIYN---EDPARVFAGLRAMYESLAATGHG-AHFDFFILSDTRDPDIAAAE-E-----AAWLELRAELG 189 (691)
T ss_pred CCCCCceEEEEeCCC---CChHHHHHHHHHHHHHHHhcCCC-CCEEEEEEECCCChhHHHHH-H-----HHHHHHHHhcC
Confidence 345789999999999 66554 55566666778997 48999999999999765321 1 23455666664
Q ss_pred cccCCcccccCCCCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCC
Q 007647 165 VQIRAPFRYFPDSEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNA 244 (595)
Q Consensus 165 v~~r~~~~~~~~~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~ 244 (595)
- .+++.|.+|++ |.+.||||+|++++..+ .++
T Consensus 190 ~------------------------------------------~~~i~yr~R~~----n~~~KaGNl~~~~~~~~--~~~ 221 (691)
T PRK05454 190 G------------------------------------------EGRIFYRRRRR----NVGRKAGNIADFCRRWG--GAY 221 (691)
T ss_pred C------------------------------------------CCcEEEEECCc----CCCccHHHHHHHHHhcC--CCc
Confidence 1 14688888775 55789999999999543 678
Q ss_pred CEEEEEcCCCCCCchHHHHHHHhhhcCCCCCCcEEEEeCCcccc--C-chhh-----hHhhHhhhhhhhcccC--Cceec
Q 007647 245 PFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFY--D-RPEN-----LCILNEYIGKGIVGIQ--GPFYQ 314 (595)
Q Consensus 245 d~vl~~DAD~~~~~pd~L~~~v~~f~d~~~d~~vg~VQ~pq~f~--d-~~~~-----~~~f~~~~~~g~~~~~--~~~~~ 314 (595)
|||+++|||+++ ++|+|++++++|. .||++|+||+++.+. | .+++ ..++......|.+.|+ ...|+
T Consensus 222 eyivvLDADs~m-~~d~L~~lv~~m~---~dP~vGlVQt~~~~~n~~slfaR~qqf~~~~y~~~~~~G~~~w~~~~g~f~ 297 (691)
T PRK05454 222 DYMVVLDADSLM-SGDTLVRLVRLME---ANPRAGLIQTLPVAVGADTLFARLQQFATRVYGPLFAAGLAWWQGGEGNYW 297 (691)
T ss_pred CEEEEEcCCCCC-CHHHHHHHHHHHh---hCcCEEEEeCCccCcCCCCHHHHHHHHHHHHHHHHHHhhhhhhccCccccc
Confidence 999999999997 7999999999995 589999999998877 2 3333 2344445667777665 35689
Q ss_pred cccceeehhhhhcccchhhhhccchhHHHHHHhhCCcHHHHHHHHHhhcCCcCCCCCchhhhHHHHhHhhccccccCCCc
Q 007647 315 GTGTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSW 394 (595)
Q Consensus 315 Gtg~~~rr~al~g~~~~~~~~~~~~~~~~~~~~~g~s~~f~~s~~~~~r~~~~~~~~~~~~~~~~~~~vg~c~ye~~~~w 394 (595)
|+|+++||+++.... .+. .+...|
T Consensus 298 G~naIiR~~af~~~~-------------------------------glp---------------~L~g~~---------- 321 (691)
T PRK05454 298 GHNAIIRVKAFAEHC-------------------------------GLP---------------PLPGRG---------- 321 (691)
T ss_pred cceEEEEHHHHHHhc-------------------------------CCc---------------cccccC----------
Confidence 999999999994210 000 001122
Q ss_pred CccccCCCCCccchHHHHHHHHhCCcEEEEeCCCCcceeccCCCCHHHHHHHHHHhhhhhHHHHHhhcchhhhhccCCCC
Q 007647 395 GDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQ 474 (595)
Q Consensus 395 ~~~~G~~~~~itED~~t~~~l~~~Gwr~~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G~~q~~~~~~~pl~~~~~~~l~ 474 (595)
||..++++||++++.+|+++||+++|++. ...+++++|+|++++++||.||++|++|++.. +.. ++++
T Consensus 322 ----p~~~~~LseD~~~a~~l~~~GyrV~~~pd-~~~~~ee~P~tl~~~~~qr~RW~~G~lQ~l~~----l~~---~gl~ 389 (691)
T PRK05454 322 ----PFGGHILSHDFVEAALMRRAGWGVWLAPD-LPGSYEELPPNLLDELKRDRRWCQGNLQHLRL----LLA---KGLH 389 (691)
T ss_pred ----CCCCCcccHHHHHHHHHHHCCCEEEEcCc-cccccccCCCCHHHHHHHHHHHHhchHHHHHH----HHh---cCCC
Confidence 78889999999999999999999999973 24679999999999999999999999999842 233 7899
Q ss_pred HHHHHHhHHhhhhhhhHHHHHHHH
Q 007647 475 FRQCLAYLWILTWGLRSIPELCYI 498 (595)
Q Consensus 475 ~~qrl~y~~~~~~~~~~~~~l~~~ 498 (595)
+.+|++|+...+.++.+...++++
T Consensus 390 ~~~R~~~l~g~~~yl~~P~wll~l 413 (691)
T PRK05454 390 PVSRLHFLTGIMSYLSAPLWLLFL 413 (691)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999987666666554444433
No 14
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=100.00 E-value=8.9e-39 Score=350.24 Aligned_cols=227 Identities=16% Similarity=0.124 Sum_probs=183.5
Q ss_pred CCCCCeEEEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhcccccCC
Q 007647 90 QELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRA 169 (595)
Q Consensus 90 ~~~P~V~V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~r~ 169 (595)
+..|.|+|+||+|||++ .+.+||+++++++|| +++|+|+||||+|+|.+.+++..+
T Consensus 72 ~~~p~vsViIP~yNE~~----~i~~~l~sll~q~yp--~~eIivVdDgs~D~t~~~~~~~~~------------------ 127 (444)
T PRK14583 72 KGHPLVSILVPCFNEGL----NARETIHAALAQTYT--NIEVIAINDGSSDDTAQVLDALLA------------------ 127 (444)
T ss_pred CCCCcEEEEEEeCCCHH----HHHHHHHHHHcCCCC--CeEEEEEECCCCccHHHHHHHHHH------------------
Confidence 35799999999999764 789999999999999 699999999999999877655321
Q ss_pred cccccCCCCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEE
Q 007647 170 PFRYFPDSEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLN 249 (595)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl~ 249 (595)
++|+++++.+++ ++||++|+|.|++ .+++|++++
T Consensus 128 -------------------------------------~~~~v~vv~~~~-----n~Gka~AlN~gl~----~a~~d~iv~ 161 (444)
T PRK14583 128 -------------------------------------EDPRLRVIHLAH-----NQGKAIALRMGAA----AARSEYLVC 161 (444)
T ss_pred -------------------------------------hCCCEEEEEeCC-----CCCHHHHHHHHHH----hCCCCEEEE
Confidence 125677776543 4689999999999 689999999
Q ss_pred EcCCCCCCchHHHHHHHhhhcCCCCCCcEEEEeCCcccc---Cchhh-----hHhhHhhhhhhhcccCCcee-cccccee
Q 007647 250 VDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFY---DRPEN-----LCILNEYIGKGIVGIQGPFY-QGTGTFH 320 (595)
Q Consensus 250 ~DAD~~~~~pd~L~~~v~~f~d~~~d~~vg~VQ~pq~f~---d~~~~-----~~~f~~~~~~g~~~~~~~~~-~Gtg~~~ 320 (595)
+|||+++ +||+|++++..|. +++++|.||+..... +.+++ ...+++.+.++.+..+..++ +|+++.+
T Consensus 162 lDAD~~~-~~d~L~~lv~~~~---~~~~~g~v~g~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~g~~~~~sG~~~~~ 237 (444)
T PRK14583 162 IDGDALL-DKNAVPYLVAPLI---ANPRTGAVTGNPRIRTRSTLIGRVQVGEFSSIIGLIKRTQRVYGQVFTVSGVVAAF 237 (444)
T ss_pred ECCCCCc-CHHHHHHHHHHHH---hCCCeEEEEccceecCCCcchhhHHHHHHHHHHHHHHHHHHHhCCceEecCceeEE
Confidence 9999997 8999999999886 578999999876544 11222 22333344444444444443 5777778
Q ss_pred ehhhhhcccchhhhhccchhHHHHHHhhCCcHHHHHHHHHhhcCCcCCCCCchhhhHHHHhHhhccccccCCCcCccccC
Q 007647 321 RRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGC 400 (595)
Q Consensus 321 rr~al~g~~~~~~~~~~~~~~~~~~~~~g~s~~f~~s~~~~~r~~~~~~~~~~~~~~~~~~~vg~c~ye~~~~w~~~~G~ 400 (595)
||+++ +++| ||
T Consensus 238 rr~al-------------------------------------------------------~~vG--------------g~ 248 (444)
T PRK14583 238 RRRAL-------------------------------------------------------ADVG--------------YW 248 (444)
T ss_pred EHHHH-------------------------------------------------------HHcC--------------CC
Confidence 88777 3566 89
Q ss_pred CCCCccchHHHHHHHHhCCcEEEEeCCCCcceeccCCCCHHHHHHHHHHhhhhhHHHHHhh
Q 007647 401 LYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSK 461 (595)
Q Consensus 401 ~~~~itED~~t~~~l~~~Gwr~~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G~~q~~~~~ 461 (595)
++++++||++++++|+.+||++.|++ ++.+++++|+|++++++||.||++|.+|+++++
T Consensus 249 ~~~~i~ED~dl~~rl~~~G~~i~~~p--~a~~~~~~p~t~~~~~~Qr~RW~~G~~~~~~~~ 307 (444)
T PRK14583 249 SPDMITEDIDISWKLQLKHWSVFFEP--RGLCWILMPETLRGLWKQRLRWAQGGAEVFLKN 307 (444)
T ss_pred CCCcccccHHHHHHHHHcCCeEEEee--ccEEeeeCCCCHHHHHHHHHHHhCcHHHHHHHH
Confidence 99999999999999999999999997 578899999999999999999999999999753
No 15
>PRK11204 N-glycosyltransferase; Provisional
Probab=100.00 E-value=4e-36 Score=326.48 Aligned_cols=228 Identities=20% Similarity=0.227 Sum_probs=178.9
Q ss_pred cCCCCCeEEEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhcccccC
Q 007647 89 IQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIR 168 (595)
Q Consensus 89 ~~~~P~V~V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~r 168 (595)
....|.|+|+||+|||++ .+.+|++|+++++|| +++|+|+||||+|+|.+.+++.++
T Consensus 50 ~~~~p~vsViIp~yne~~----~i~~~l~sl~~q~yp--~~eiiVvdD~s~d~t~~~l~~~~~----------------- 106 (420)
T PRK11204 50 LKEYPGVSILVPCYNEGE----NVEETISHLLALRYP--NYEVIAINDGSSDNTGEILDRLAA----------------- 106 (420)
T ss_pred cCCCCCEEEEEecCCCHH----HHHHHHHHHHhCCCC--CeEEEEEECCCCccHHHHHHHHHH-----------------
Confidence 356799999999999764 899999999999999 789999999999998866654321
Q ss_pred CcccccCCCCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEE
Q 007647 169 APFRYFPDSEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFML 248 (595)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl 248 (595)
.+|+++++.+++ ++||++|+|.|++ .+++|+++
T Consensus 107 --------------------------------------~~~~v~~i~~~~-----n~Gka~aln~g~~----~a~~d~i~ 139 (420)
T PRK11204 107 --------------------------------------QIPRLRVIHLAE-----NQGKANALNTGAA----AARSEYLV 139 (420)
T ss_pred --------------------------------------hCCcEEEEEcCC-----CCCHHHHHHHHHH----HcCCCEEE
Confidence 235678887553 4689999999999 68999999
Q ss_pred EEcCCCCCCchHHHHHHHhhhcCCCCCCcEEEEeCCccccCc---hhh-h----HhhHhhhhhhhcccCCcee-ccccce
Q 007647 249 NVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYDR---PEN-L----CILNEYIGKGIVGIQGPFY-QGTGTF 319 (595)
Q Consensus 249 ~~DAD~~~~~pd~L~~~v~~f~d~~~d~~vg~VQ~pq~f~d~---~~~-~----~~f~~~~~~g~~~~~~~~~-~Gtg~~ 319 (595)
++|||+++ +||+|.+++..|. .|+++++||+.....+. .+. + ...+.....+....+...+ .|++++
T Consensus 140 ~lDaD~~~-~~d~L~~l~~~~~---~~~~v~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 215 (420)
T PRK11204 140 CIDGDALL-DPDAAAYMVEHFL---HNPRVGAVTGNPRIRNRSTLLGRIQVGEFSSIIGLIKRAQRVYGRVFTVSGVITA 215 (420)
T ss_pred EECCCCCC-ChhHHHHHHHHHH---hCCCeEEEECCceeccchhHHHHHHHHHHHHhhhHHHHHHHHhCCceEecceeee
Confidence 99999997 8999999999985 58999999987655421 111 1 1111111222222222222 466666
Q ss_pred eehhhhhcccchhhhhccchhHHHHHHhhCCcHHHHHHHHHhhcCCcCCCCCchhhhHHHHhHhhccccccCCCcCcccc
Q 007647 320 HRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVG 399 (595)
Q Consensus 320 ~rr~al~g~~~~~~~~~~~~~~~~~~~~~g~s~~f~~s~~~~~r~~~~~~~~~~~~~~~~~~~vg~c~ye~~~~w~~~~G 399 (595)
+||+++ +++| |
T Consensus 216 ~rr~~l-------------------------------------------------------~~vg--------------g 226 (420)
T PRK11204 216 FRKSAL-------------------------------------------------------HEVG--------------Y 226 (420)
T ss_pred eeHHHH-------------------------------------------------------HHhC--------------C
Confidence 776666 3566 8
Q ss_pred CCCCCccchHHHHHHHHhCCcEEEEeCCCCcceeccCCCCHHHHHHHHHHhhhhhHHHHHhh
Q 007647 400 CLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSK 461 (595)
Q Consensus 400 ~~~~~itED~~t~~~l~~~Gwr~~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G~~q~~~~~ 461 (595)
|+++.++||++++++++++||++.|++ ++.++++.|+|++++++||.||++|++|.++++
T Consensus 227 ~~~~~~~ED~~l~~rl~~~G~~i~~~p--~~~~~~~~p~t~~~~~~Qr~RW~~G~~~~l~~~ 286 (420)
T PRK11204 227 WSTDMITEDIDISWKLQLRGWDIRYEP--RALCWILMPETLKGLWKQRLRWAQGGAEVLLKN 286 (420)
T ss_pred CCCCcccchHHHHHHHHHcCCeEEecc--ccEEEeECcccHHHHHHHHHHHhcCHHHHHHHH
Confidence 999999999999999999999999997 478899999999999999999999999999753
No 16
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=100.00 E-value=2.5e-36 Score=330.37 Aligned_cols=277 Identities=16% Similarity=0.173 Sum_probs=196.0
Q ss_pred cCCCCCeEEEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhcccccC
Q 007647 89 IQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIR 168 (595)
Q Consensus 89 ~~~~P~V~V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~r 168 (595)
++..|.|+|+||+|||++ .+.++|+++.+++||.++++|+|+||||+|+|.+.+++.++
T Consensus 45 ~~~~P~vsVIIP~yNe~~----~l~~~l~sl~~q~yp~~~~eIiVVDd~StD~T~~il~~~~~----------------- 103 (439)
T TIGR03111 45 IGKLPDITIIIPVYNSED----TLFNCIESIYNQTYPIELIDIILANNQSTDDSFQVFCRAQN----------------- 103 (439)
T ss_pred cCCCCCEEEEEEeCCChH----HHHHHHHHHHhcCCCCCCeEEEEEECCCChhHHHHHHHHHH-----------------
Confidence 356899999999999775 99999999999999998999999999999999877665431
Q ss_pred CcccccCCCCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEE
Q 007647 169 APFRYFPDSEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFML 248 (595)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl 248 (595)
.+|++..+..+ +++||++|+|+|++ .+++|+|+
T Consensus 104 --------------------------------------~~~~v~v~~~~-----~~~Gka~AlN~gl~----~s~g~~v~ 136 (439)
T TIGR03111 104 --------------------------------------EFPGLSLRYMN-----SDQGKAKALNAAIY----NSIGKYII 136 (439)
T ss_pred --------------------------------------hCCCeEEEEeC-----CCCCHHHHHHHHHH----HccCCEEE
Confidence 12333333222 24799999999999 68999999
Q ss_pred EEcCCCCCCchHHHHHHHhhhcCCCCCCcEEEEeCCcccc-Cchhh----------hHhhHhhh---hh--hhcc-cCCc
Q 007647 249 NVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFY-DRPEN----------LCILNEYI---GK--GIVG-IQGP 311 (595)
Q Consensus 249 ~~DAD~~~~~pd~L~~~v~~f~d~~~d~~vg~VQ~pq~f~-d~~~~----------~~~f~~~~---~~--g~~~-~~~~ 311 (595)
++|||+++ +||+|++++..|. .|++++.|++.+.-. +.... ...+++.. .. +... .+..
T Consensus 137 ~~DaD~~~-~~d~L~~l~~~f~---~~~~v~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~l~~r~~~s~~~~~ 212 (439)
T TIGR03111 137 HIDSDGKL-HKDAIKNMVTRFE---NNPDIHAMTGVILTDKELIEKTKGRFLKLIRRCEYFEYAQAFLAGRNFESQVNSL 212 (439)
T ss_pred EECCCCCc-ChHHHHHHHHHHH---hCCCeEEEEeEEecCchhhhhhcchhhhHhHHhHHHHHHHHHHhhhHHHHhcCCe
Confidence 99999997 8999999999985 578888876543221 11100 00011110 00 0001 1111
Q ss_pred e-eccccceeehhhhhcccchhhhhccchhHHHHHHhhCCcHHHHHHHHHhhcCCcCCCCCchhhhHHHHhHhhcccccc
Q 007647 312 F-YQGTGTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEY 390 (595)
Q Consensus 312 ~-~~Gtg~~~rr~al~g~~~~~~~~~~~~~~~~~~~~~g~s~~f~~s~~~~~r~~~~~~~~~~~~~~~~~~~vg~c~ye~ 390 (595)
+ ..|+++++||+++ +++|
T Consensus 213 ~~~sGa~~~~Rr~~l-------------------------------------------------------~~vg------ 231 (439)
T TIGR03111 213 FTLSGAFSAFRRETI-------------------------------------------------------LKTQ------ 231 (439)
T ss_pred EEEccHHHhhhHHHH-------------------------------------------------------HHhC------
Confidence 1 1234444444444 5677
Q ss_pred CCCcCccccCCCCCccchHHHHHHHHh-CCcEEEEeCCCCcceeccCCCCHHHHHHHHHHhhhhhHHHHHhhcchhhhhc
Q 007647 391 GSSWGDEVGCLYGATAEDNLTGLVIHS-KGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATL 469 (595)
Q Consensus 391 ~~~w~~~~G~~~~~itED~~t~~~l~~-~Gwr~~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G~~q~~~~~~~pl~~~~ 469 (595)
||+.++++||++++++++. .|+|+.|++ ++.++.++|+|++++++||.||++|.+|++....++...
T Consensus 232 --------gf~~~~i~ED~~l~~rl~~~~g~kv~~~~--~a~~~~~~p~t~~~~~~QR~RW~rG~~qv~~~~~~~~~~-- 299 (439)
T TIGR03111 232 --------LYNSETVGEDTDMTFQIRELLDGKVYLCE--NAIFYVDPIDGLNKLYTQRQRWQRGELEVSHMFFESANK-- 299 (439)
T ss_pred --------CCCCCCcCccHHHHHHHHHhcCCeEEECC--CCEEEEECCcCHHHHHHHHHHHhccHHHHHHHHHhhhhh--
Confidence 8999999999999999975 699999986 578899999999999999999999999999643333332
Q ss_pred cCCCCHHHHHHhHHhhhhhhhHHHHHHHHHHHHHHHHhCCcc
Q 007647 470 IGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTF 511 (595)
Q Consensus 470 ~~~l~~~qrl~y~~~~~~~~~~~~~l~~~~~p~~~l~~g~~~ 511 (595)
++.++.+++.+..........++..++.++++++.++|.++
T Consensus 300 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (439)
T TIGR03111 300 -SIKGFFSNFMVRRIMYDHTFAFPRMIWYFAMIFLIFLGYPV 340 (439)
T ss_pred -chhhhhhHHHHHHHHhhHhhHHHHHHHHHHHHHHHHhccHH
Confidence 34555565544333333344667777778888887777543
No 17
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan. Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.
Probab=100.00 E-value=5.5e-38 Score=319.42 Aligned_cols=238 Identities=15% Similarity=0.262 Sum_probs=184.1
Q ss_pred eEEEEeccCCCCCChhHHHHHHHHHHh----cCC-CCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhcccccCC
Q 007647 95 VDMFVTTADAELEPPIITVNTVLSLLA----VDY-PVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRA 169 (595)
Q Consensus 95 V~V~IptynE~~Ep~~vv~~tl~s~l~----ldY-P~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~r~ 169 (595)
|+|+||+|| ||++++.+||.+.++ +|| | +++|+|+||++++... . .+. +.|..+|++++
T Consensus 1 ~SIliP~~n---e~~~~l~~~l~~~~~~~~~~~~~~--~~eI~vldD~~d~~~~-~-~~~----~~~~~l~~~~~----- 64 (254)
T cd04191 1 TAIVMPVYN---EDPARVFAGLRAMYESLAKTGLAD--HFDFFILSDTRDPDIW-L-AEE----AAWLDLCEELG----- 64 (254)
T ss_pred CEEEEeCCC---CCHHHHHHHHHHHHHHHHhcCCcC--ceEEEEECCCCChHHH-H-HHH----HHHHHHHHHhC-----
Confidence 799999999 888899999999875 576 5 7999999999987432 1 111 12333454442
Q ss_pred cccccCCCCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEE
Q 007647 170 PFRYFPDSEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLN 249 (595)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl~ 249 (595)
..++++|++|++ +.|.||||||+++...+ +++|+|++
T Consensus 65 -------------------------------------~~~~v~~~~r~~----~~g~Kag~l~~~~~~~~--~~~~~i~~ 101 (254)
T cd04191 65 -------------------------------------AQGRIYYRRRRE----NTGRKAGNIADFCRRWG--SRYDYMVV 101 (254)
T ss_pred -------------------------------------CCCcEEEEEcCC----CCCccHHHHHHHHHHhC--CCCCEEEE
Confidence 125899999987 45789999999998421 68999999
Q ss_pred EcCCCCCCchHHHHHHHhhhcCCCCCCcEEEEeCCcccc--Cch-hh-----hHhhHhhhhhhhcccCC--ceeccccce
Q 007647 250 VDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFY--DRP-EN-----LCILNEYIGKGIVGIQG--PFYQGTGTF 319 (595)
Q Consensus 250 ~DAD~~~~~pd~L~~~v~~f~d~~~d~~vg~VQ~pq~f~--d~~-~~-----~~~f~~~~~~g~~~~~~--~~~~Gtg~~ 319 (595)
+|||+++ +||+|.+++.+|. .||++|+||+|+.+. +.+ .+ ...|...++.|.+.|++ .+++|++.+
T Consensus 102 ~DaD~~~-~p~~l~~~v~~~~---~~~~vg~vq~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 177 (254)
T cd04191 102 LDADSLM-SGDTIVRLVRRME---ANPRAGIIQTAPKLIGAETLFARLQQFANRLYGPVFGRGLAAWQGGEGNYWGHNAI 177 (254)
T ss_pred EeCCCCC-CHHHHHHHHHHHH---hCCCEEEEeCCceeECCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCccCccceEEE
Confidence 9999997 7999999999996 589999999999988 332 22 34455566777776543 578999999
Q ss_pred eehhhhhcccchhhhhccchhHHHHHHhhCCcHHHHHHHHHhhcCCcCCCCCchhhhHHHHhHhhccccccCCCcCcccc
Q 007647 320 HRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVG 399 (595)
Q Consensus 320 ~rr~al~g~~~~~~~~~~~~~~~~~~~~~g~s~~f~~s~~~~~r~~~~~~~~~~~~~~~~~~~vg~c~ye~~~~w~~~~G 399 (595)
+||++|.... + +.++|+. .|
T Consensus 178 ~Rr~al~~~~-------------------------------~------------------~~~i~g~-----------g~ 197 (254)
T cd04191 178 IRVAAFMEHC-------------------------------A------------------LPVLPGR-----------PP 197 (254)
T ss_pred EEHHHHHHhc-------------------------------C------------------CccccCC-----------CC
Confidence 9999983110 0 0123321 17
Q ss_pred CCCCCccchHHHHHHHHhCCcEEEEeCCCCcceeccCCCCHHHHHHHHHHhhhhhHH
Q 007647 400 CLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLE 456 (595)
Q Consensus 400 ~~~~~itED~~t~~~l~~~Gwr~~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G~~q 456 (595)
|++++++||+++|++++.+||+++|.+. ...+++++|+|++++++||.||++|++|
T Consensus 198 ~~~~~l~eD~~l~~~~~~~G~ri~~~~~-~~~~~~~~p~~~~~~~~qr~RW~~G~~q 253 (254)
T cd04191 198 FGGHILSHDFVEAALMRRAGWEVRLAPD-LEGSYEECPPTLIDFLKRDRRWCQGNLQ 253 (254)
T ss_pred CCCCeecHHHHHHHHHHHcCCEEEEccC-CcceEeECCCCHHHHHHHHHHHHhhcCc
Confidence 8889999999999999999999999972 2235899999999999999999999987
No 18
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=100.00 E-value=2.6e-36 Score=328.17 Aligned_cols=227 Identities=25% Similarity=0.331 Sum_probs=179.8
Q ss_pred CCCeEEEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhcccccCCcc
Q 007647 92 LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPF 171 (595)
Q Consensus 92 ~P~V~V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~r~~~ 171 (595)
.|.|+|+||+|| |+++++++|+.+++++||| +++|+|+||+++|+|.+.+++..+ +++
T Consensus 53 ~p~vsviiP~yn---E~~~~~~~~l~s~~~~dyp--~~evivv~d~~~d~~~~~~~~~~~----------~~~------- 110 (439)
T COG1215 53 LPKVSVIIPAYN---EEPEVLEETLESLLSQDYP--RYEVIVVDDGSTDETYEILEELGA----------EYG------- 110 (439)
T ss_pred CCceEEEEecCC---CchhhHHHHHHHHHhCCCC--CceEEEECCCCChhHHHHHHHHHh----------hcC-------
Confidence 599999999999 7778999999999999999 689999999999998876654321 110
Q ss_pred cccCCCCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEEc
Q 007647 172 RYFPDSEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVD 251 (595)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl~~D 251 (595)
|+++.+..+ .+++||++|+|.++. .+++|+|+++|
T Consensus 111 -------------------------------------~~~~~~~~~----~~~~gK~~al~~~l~----~~~~d~V~~~D 145 (439)
T COG1215 111 -------------------------------------PNFRVIYPE----KKNGGKAGALNNGLK----RAKGDVVVILD 145 (439)
T ss_pred -------------------------------------cceEEEecc----ccCccchHHHHHHHh----hcCCCEEEEEc
Confidence 233333211 156899999999999 68899999999
Q ss_pred CCCCCCchHHHHHHHhhhcCCCCCCcEEEEeCCccccCch-hh----------hHhhHhhhhhhhcccCCceecccccee
Q 007647 252 CDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYDRP-EN----------LCILNEYIGKGIVGIQGPFYQGTGTFH 320 (595)
Q Consensus 252 AD~~~~~pd~L~~~v~~f~d~~~d~~vg~VQ~pq~f~d~~-~~----------~~~f~~~~~~g~~~~~~~~~~Gtg~~~ 320 (595)
||+++ +||+|++++++|. .++.++.+|.|+.+..+. .+ ...++.....+.+.....+++|++.++
T Consensus 146 aD~~~-~~d~l~~~~~~f~---~~~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~G~~~~~ 221 (439)
T COG1215 146 ADTVP-EPDALRELVSPFE---DPPVGAVVGTPRIRNRPDPSNLLGRIQAIEYLSAFYFRLRAASKGGLISFLSGSSSAF 221 (439)
T ss_pred CCCCC-ChhHHHHHHhhhc---CCCeeEEeCCceeeecCChhhhcchhcchhhhhhHHHhhhhhhhcCCeEEEcceeeeE
Confidence 99996 8999999999995 334556888997555210 12 222222222233333466788999999
Q ss_pred ehhhhhcccchhhhhccchhHHHHHHhhCCcHHHHHHHHHhhcCCcCCCCCchhhhHHHHhHhhccccccCCCcCccccC
Q 007647 321 RRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGC 400 (595)
Q Consensus 321 rr~al~g~~~~~~~~~~~~~~~~~~~~~g~s~~f~~s~~~~~r~~~~~~~~~~~~~~~~~~~vg~c~ye~~~~w~~~~G~ 400 (595)
||++|. ++| ||
T Consensus 222 rr~aL~-------------------------------------------------------~~g--------------~~ 232 (439)
T COG1215 222 RRSALE-------------------------------------------------------EVG--------------GW 232 (439)
T ss_pred EHHHHH-------------------------------------------------------HhC--------------CC
Confidence 998882 455 79
Q ss_pred CCCCccchHHHHHHHHhCCcEEEEeCCCCcceeccCCCCHHHHHHHHHHhhhhhHHHHHh
Q 007647 401 LYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFS 460 (595)
Q Consensus 401 ~~~~itED~~t~~~l~~~Gwr~~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G~~q~~~~ 460 (595)
+.+++|||.+++++++.+|||+.|++ ++.+++++|+|++++++||.||++|.+|++..
T Consensus 233 ~~~~i~ED~~lt~~l~~~G~~~~~~~--~~~~~~~~p~t~~~~~~Qr~RW~~g~~~~~~~ 290 (439)
T COG1215 233 LEDTITEDADLTLRLHLRGYRVVYVP--EAIVWTEAPETLKELWRQRLRWARGGLQVLLL 290 (439)
T ss_pred CCCceeccHHHHHHHHHCCCeEEEee--cceEeeeCcccHHHHHHHHHHHHcccceeeeh
Confidence 99999999999999999999999997 46889999999999999999999999999964
No 19
>PRK14716 bacteriophage N4 adsorption protein B; Provisional
Probab=100.00 E-value=9e-33 Score=304.06 Aligned_cols=259 Identities=16% Similarity=0.127 Sum_probs=183.2
Q ss_pred cCCCCCeEEEEeccCCCCCChhHHHHHHHHHH-hcCCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhccccc
Q 007647 89 IQELPPVDMFVTTADAELEPPIITVNTVLSLL-AVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQI 167 (595)
Q Consensus 89 ~~~~P~V~V~IptynE~~Ep~~vv~~tl~s~l-~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~ 167 (595)
..+.|.|+|+||+|||++ +|.+||++++ ++||| +++|+|+||+++|+|.+.+++.++
T Consensus 62 ~~~~p~vaIlIPA~NE~~----vI~~~l~s~L~~ldY~--~~eIiVv~d~ndd~T~~~v~~l~~---------------- 119 (504)
T PRK14716 62 SVPEKRIAIFVPAWREAD----VIGRMLEHNLATLDYE--NYRIFVGTYPNDPATLREVDRLAA---------------- 119 (504)
T ss_pred cCCCCceEEEEeccCchh----HHHHHHHHHHHcCCCC--CeEEEEEECCCChhHHHHHHHHHH----------------
Confidence 345899999999999987 9999999864 78998 899999999999999887765431
Q ss_pred CCcccccCCCCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcC--CCCC--
Q 007647 168 RAPFRYFPDSEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSG--LMTN-- 243 (595)
Q Consensus 168 r~~~~~~~~~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~--~~~~-- 243 (595)
.+|+++.+.- +++ ...+|++|||++++... ...+
T Consensus 120 ---------------------------------------~~p~v~~vv~-~~~--gp~~Ka~aLN~~l~~~~~~e~~~G~ 157 (504)
T PRK14716 120 ---------------------------------------RYPRVHLVIV-PHD--GPTSKADCLNWIYQAIFAFERERGI 157 (504)
T ss_pred ---------------------------------------HCCCeEEEEe-CCC--CCCCHHHHHHHHHHHHHHhhhhcCC
Confidence 2355554442 223 23689999999987420 0123
Q ss_pred -CCEEEEEcCCCCCCchHHHHHHHhhhcCCCCCCcEEEEeCCccccCc-hhh------hHhh---HhhhhhhhcccCCce
Q 007647 244 -APFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYDR-PEN------LCIL---NEYIGKGIVGIQGPF 312 (595)
Q Consensus 244 -~d~vl~~DAD~~~~~pd~L~~~v~~f~d~~~d~~vg~VQ~pq~f~d~-~~~------~~~f---~~~~~~g~~~~~~~~ 312 (595)
+|+|+++|||.++ +||+|+....++ ++.++||.|....+. ... ..-| +...+..++.+++++
T Consensus 158 ~~d~vvi~DAD~~v-~Pd~Lr~~~~~~------~~~~~VQ~pv~~~~~~~~~~~ag~y~~ef~~~~~~~l~~r~~LG~~~ 230 (504)
T PRK14716 158 RFAIIVLHDAEDVI-HPLELRLYNYLL------PRHDFVQLPVFSLPRDWGEWVAGTYMDEFAESHLKDLPVREALGGLI 230 (504)
T ss_pred CcCEEEEEcCCCCc-CccHHHHHHhhc------CCCCEEecceeccCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCcc
Confidence 4999999999997 899998765443 345789998765411 111 1112 122344566777665
Q ss_pred -eccccceeehhhhhcccchhhhhccchhHHHHHHhhCCcHHHHHHHHHhhcCCcCCCCCchhhhHHHHhHhhccccccC
Q 007647 313 -YQGTGTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYG 391 (595)
Q Consensus 313 -~~Gtg~~~rr~al~g~~~~~~~~~~~~~~~~~~~~~g~s~~f~~s~~~~~r~~~~~~~~~~~~~~~~~~~vg~c~ye~~ 391 (595)
++|+|+.+||++|..+ +.+-|+
T Consensus 231 ~~~Gtg~afRR~aLe~l---------------------------------------------------~~~~GG------ 253 (504)
T PRK14716 231 PSAGVGTAFSRRALERL---------------------------------------------------AAERGG------ 253 (504)
T ss_pred ccCCeeEEeEHHHHHHH---------------------------------------------------HhhcCC------
Confidence 5799999999988310 000110
Q ss_pred CCcCccccCCCCCccchHHHHHHHHhCCcEEEEeCCC-------------CcceeccCCCCHHHHHHHHHHhhhhh-HHH
Q 007647 392 SSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPI-------------PHAFLGCASPSGPAGMRQQKRWATGL-LEI 457 (595)
Q Consensus 392 ~~w~~~~G~~~~~itED~~t~~~l~~~Gwr~~y~~~~-------------~~~~~g~aP~tl~~~~~Qr~RWa~G~-~q~ 457 (595)
.+|+++++|||+++|++++.+|||++|++.. ..+..+++|+|++++++||.||++|. +|.
T Consensus 254 ------~~fd~~sLTED~dLglRL~~~G~rv~y~p~ai~~~~~~~~~~~~~v~t~e~~P~t~~a~~rQR~RW~~Gi~~Q~ 327 (504)
T PRK14716 254 ------QPFDSDSLTEDYDIGLRLKRAGFRQIFVRVRADDTTDRPDRRGEPIATREFFPDTFKAAVRQKARWIYGIAFQG 327 (504)
T ss_pred ------CCCCCCCcchHHHHHHHHHHCCCEEEEecccccccccccccccccccccccCccCHHHHHHHHHHHHhchHHhh
Confidence 1399999999999999999999999998731 01245889999999999999999995 788
Q ss_pred HHhh--cchhhhhccCCCCHHHHHHhHHh
Q 007647 458 LFSK--RNPILATLIGKLQFRQCLAYLWI 484 (595)
Q Consensus 458 ~~~~--~~pl~~~~~~~l~~~qrl~y~~~ 484 (595)
..+. ..++. .+.+.+++|...+..
T Consensus 328 ~~~~gw~~~~~---~~~~~~rdr~~~~~~ 353 (504)
T PRK14716 328 WERLGWKGPAA---TKYMLWRDRKGLLTN 353 (504)
T ss_pred HHhcCCCCchh---hhhhHHHHHHHHHHH
Confidence 7532 11222 245677788777654
No 20
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we
Probab=100.00 E-value=1.5e-32 Score=273.96 Aligned_cols=222 Identities=19% Similarity=0.235 Sum_probs=169.4
Q ss_pred CCeEEEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhcccccCCccc
Q 007647 93 PPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFR 172 (595)
Q Consensus 93 P~V~V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~r~~~~ 172 (595)
|+|+|+||+|||++ .|.++|+++++++||.++++|+|+|| |+|+|.+.+++..+ ++
T Consensus 1 p~vSViIp~yNe~~----~l~~~L~sl~~q~~~~~~~eIiVvD~-s~D~t~~~~~~~~~----------~~--------- 56 (232)
T cd06437 1 PMVTVQLPVFNEKY----VVERLIEAACALDYPKDRLEIQVLDD-STDETVRLAREIVE----------EY--------- 56 (232)
T ss_pred CceEEEEecCCcHH----HHHHHHHHHHhcCCCccceEEEEEEC-CCCcHHHHHHHHHH----------HH---------
Confidence 68999999999875 99999999999999988899999998 88999877765321 00
Q ss_pred ccCCCCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEEcC
Q 007647 173 YFPDSEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDC 252 (595)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl~~DA 252 (595)
. ...++++++.+.+ +.++|++|+|.|++ .+++|||+++||
T Consensus 57 -------------------~-------------~~~~~i~~~~~~~----~~G~k~~a~n~g~~----~a~~~~i~~~Da 96 (232)
T cd06437 57 -------------------A-------------AQGVNIKHVRRAD----RTGYKAGALAEGMK----VAKGEYVAIFDA 96 (232)
T ss_pred -------------------h-------------hcCCceEEEECCC----CCCCchHHHHHHHH----hCCCCEEEEEcC
Confidence 0 0124567776654 34579999999999 689999999999
Q ss_pred CCCCCchHHHHHHHhhhcCCCCCCcEEEEeCCccccCc---h-hh-----hHhhHhhhhhhhcccCCce-eccccceeeh
Q 007647 253 DMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYDR---P-EN-----LCILNEYIGKGIVGIQGPF-YQGTGTFHRR 322 (595)
Q Consensus 253 D~~~~~pd~L~~~v~~f~d~~~d~~vg~VQ~pq~f~d~---~-~~-----~~~f~~~~~~g~~~~~~~~-~~Gtg~~~rr 322 (595)
|+++ +|++|.+++.++ .++++++||++..+.+. + .. ...++.....+....+... .+|+++++||
T Consensus 97 D~~~-~~~~l~~~~~~~----~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr 171 (232)
T cd06437 97 DFVP-PPDFLQKTPPYF----ADPKLGFVQTRWGHINANYSLLTRVQAMSLDYHFTIEQVARSSTGLFFNFNGTAGVWRK 171 (232)
T ss_pred CCCC-ChHHHHHhhhhh----cCCCeEEEecceeeEcCCCchhhHhhhhhHHhhhhHhHhhHhhcCCeEEeccchhhhhH
Confidence 9997 799999977666 57889999986654321 1 11 1112222233332222222 3566667776
Q ss_pred hhhhcccchhhhhccchhHHHHHHhhCCcHHHHHHHHHhhcCCcCCCCCchhhhHHHHhHhhccccccCCCcCccccCCC
Q 007647 323 DVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLY 402 (595)
Q Consensus 323 ~al~g~~~~~~~~~~~~~~~~~~~~~g~s~~f~~s~~~~~r~~~~~~~~~~~~~~~~~~~vg~c~ye~~~~w~~~~G~~~ 402 (595)
+++ +++| ||+.
T Consensus 172 ~~~-------------------------------------------------------~~vg--------------g~~~ 182 (232)
T cd06437 172 ECI-------------------------------------------------------EDAG--------------GWNH 182 (232)
T ss_pred HHH-------------------------------------------------------HHhC--------------CCCC
Confidence 665 3566 7888
Q ss_pred CCccchHHHHHHHHhCCcEEEEeCCCCcceeccCCCCHHHHHHHHHHhhhhh
Q 007647 403 GATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGL 454 (595)
Q Consensus 403 ~~itED~~t~~~l~~~Gwr~~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G~ 454 (595)
.+..||+++++|++.+||++.|++ ++.+++..|+|++++++||+||++|.
T Consensus 183 ~~~~ED~~l~~rl~~~G~~~~~~~--~~~v~~~~~~~~~~~~~q~~rW~~g~ 232 (232)
T cd06437 183 DTLTEDLDLSYRAQLKGWKFVYLD--DVVVPAELPASMSAYRSQQHRWSKGP 232 (232)
T ss_pred CcchhhHHHHHHHHHCCCeEEEec--cceeeeeCCcCHHHHHHHHHHhccCC
Confidence 889999999999999999999997 57889999999999999999999984
No 21
>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=100.00 E-value=3.7e-31 Score=302.12 Aligned_cols=237 Identities=17% Similarity=0.175 Sum_probs=174.3
Q ss_pred cCCCCCeEEEEeccCCCCCChhHHHHHHHHHH-hcCCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhccccc
Q 007647 89 IQELPPVDMFVTTADAELEPPIITVNTVLSLL-AVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQI 167 (595)
Q Consensus 89 ~~~~P~V~V~IptynE~~Ep~~vv~~tl~s~l-~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~ 167 (595)
.++.|.|+|+||+|||+. ++.+|+.+++ ++||| +++|+|++|++++.|.+.+++.+ ++
T Consensus 59 ~~~~~~vsIlVPa~nE~~----vi~~~i~~ll~~ldYP--~~eI~vi~~~nD~~T~~~~~~l~----------~~----- 117 (727)
T PRK11234 59 KPDEKPLAIMVPAWNETG----VIGNMAELAATTLDYE--NYHIFVGTYPNDPATQADVDAVC----------AR----- 117 (727)
T ss_pred cCCCCCEEEEEecCcchh----hHHHHHHHHHHhCCCC--CeEEEEEecCCChhHHHHHHHHH----------HH-----
Confidence 456799999999999987 9999999987 79999 69999999988888887776542 22
Q ss_pred CCcccccCCCCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCC-----CC
Q 007647 168 RAPFRYFPDSEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGL-----MT 242 (595)
Q Consensus 168 r~~~~~~~~~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~-----~~ 242 (595)
+|+++.+.-++ +| .++||+|||+++..... ..
T Consensus 118 ----------------------------------------~p~~~~v~~~~-~g--~~gKa~aLN~~l~~~~~~e~~~~~ 154 (727)
T PRK11234 118 ----------------------------------------FPNVHKVVCAR-PG--PTSKADCLNNVLDAITQFERSANF 154 (727)
T ss_pred ----------------------------------------CCCcEEEEeCC-CC--CCCHHHHHHHHHHHHHhhhcccCC
Confidence 24444433222 22 46899999999985310 12
Q ss_pred CCCEEEEEcCCCCCCchHHHHHHHhhhcCCCCCCcEEEEeCCccccCc-hhh---------hHhhHhhhhhhhcccCCce
Q 007647 243 NAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYDR-PEN---------LCILNEYIGKGIVGIQGPF 312 (595)
Q Consensus 243 ~~d~vl~~DAD~~~~~pd~L~~~v~~f~d~~~d~~vg~VQ~pq~f~d~-~~~---------~~~f~~~~~~g~~~~~~~~ 312 (595)
..++++++|||.++ +||+|+ .+.++. +++ ++||.|..-.++ ..+ ....+...+.+++.+++++
T Consensus 155 ~~~vvvi~DAD~~v-~pd~L~-~~~~l~----~~~-~~VQ~p~~p~~~~~~~~~~~~~~~EFa~~~~~~~~~~~~lgg~~ 227 (727)
T PRK11234 155 AFAGFILHDAEDVI-SPMELR-LFNYLV----ERK-DLIQIPVYPFEREWTHFTSGTYIDEFAELHGKDVPVREALAGQV 227 (727)
T ss_pred cccEEEEEcCCCCC-ChhHHH-HHHhhc----CCC-CeEeecccCCCccHHHHHHHHHHHHHHHHhhhhhHHHHHcCCCc
Confidence 45778899999997 999997 677774 344 899998653322 111 1122234467778886654
Q ss_pred -eccccceeehhhhhcccchhhhhccchhHHHHHHhhCCcHHHHHHHHHhhcCCcCCCCCchhhhHHHHhHhhccccccC
Q 007647 313 -YQGTGTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYG 391 (595)
Q Consensus 313 -~~Gtg~~~rr~al~g~~~~~~~~~~~~~~~~~~~~~g~s~~f~~s~~~~~r~~~~~~~~~~~~~~~~~~~vg~c~ye~~ 391 (595)
+.|+|+.++|+++ +++.++|+
T Consensus 228 ~l~G~~~af~Rr~l----------------------------------------------------~al~~~gg------ 249 (727)
T PRK11234 228 PSAGVGTCFSRRAV----------------------------------------------------TALLEDGD------ 249 (727)
T ss_pred ccCCceEEEecccH----------------------------------------------------HHHHHhcC------
Confidence 4689999955544 12234542
Q ss_pred CCcCccccCCCCCccchHHHHHHHHhCCcEEEEeCCC---------------------CcceeccCCCCHHHHHHHHHHh
Q 007647 392 SSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPI---------------------PHAFLGCASPSGPAGMRQQKRW 450 (595)
Q Consensus 392 ~~w~~~~G~~~~~itED~~t~~~l~~~Gwr~~y~~~~---------------------~~~~~g~aP~tl~~~~~Qr~RW 450 (595)
+.||+.+++|||+++|++|+.+||+++|++.. ..++++..|+|+++.++||.||
T Consensus 250 -----g~~~~~~~lTED~dlg~rL~~~G~~v~f~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~t~~~~~rQR~RW 324 (727)
T PRK11234 250 -----GIAFDVQSLTEDYDIGFRLKEKGMREIFVRFPVVDEAKEREQRKFLQHARTSNMICVREYFPDTFSAAVRQKSRW 324 (727)
T ss_pred -----CCCcCCCcchHHHHHHHHHHHCCCEEEEcccccccccccccccccccccccccceEEEEeCchhHHHHHHHHHHH
Confidence 22699999999999999999999999998711 1347888999999999999999
Q ss_pred hhh-hHHHHH
Q 007647 451 ATG-LLEILF 459 (595)
Q Consensus 451 a~G-~~q~~~ 459 (595)
.+| .+|.+.
T Consensus 325 ~~G~~~q~~~ 334 (727)
T PRK11234 325 IIGIVFQGFK 334 (727)
T ss_pred HcccHHHHHH
Confidence 999 688874
No 22
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot
Probab=99.98 E-value=2.1e-31 Score=267.79 Aligned_cols=226 Identities=21% Similarity=0.293 Sum_probs=171.4
Q ss_pred CCeEEEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhcccccCCccc
Q 007647 93 PPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFR 172 (595)
Q Consensus 93 P~V~V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~r~~~~ 172 (595)
|.|+|+||+|||++ .+.++|+|+++++||.++++|+|+||+|+|.|.+.+++... +
T Consensus 1 p~vsIiIp~~Ne~~----~l~~~l~sl~~~~y~~~~~eiivVdd~s~d~t~~i~~~~~~----------~---------- 56 (241)
T cd06427 1 PVYTILVPLYKEAE----VLPQLIASLSALDYPRSKLDVKLLLEEDDEETIAAARALRL----------P---------- 56 (241)
T ss_pred CeEEEEEecCCcHH----HHHHHHHHHHhCcCCcccEEEEEEECCCCchHHHHHHHhcc----------C----------
Confidence 78999999999765 89999999999999988899999999999998876543210 0
Q ss_pred ccCCCCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEEcC
Q 007647 173 YFPDSEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDC 252 (595)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl~~DA 252 (595)
...+++++... +..||++|+|.|++ .++||+|+++|+
T Consensus 57 ----------------------------------~~~~i~~~~~~-----~~~G~~~a~n~g~~----~a~gd~i~~~Da 93 (241)
T cd06427 57 ----------------------------------SIFRVVVVPPS-----QPRTKPKACNYALA----FARGEYVVIYDA 93 (241)
T ss_pred ----------------------------------CCeeEEEecCC-----CCCchHHHHHHHHH----hcCCCEEEEEcC
Confidence 00134444322 34689999999999 789999999999
Q ss_pred CCCCCchHHHHHHHhhhcCCCCCCcEEEEeCCccccCchhh---------hHhhHhhhhhhhcccCCce-eccccceeeh
Q 007647 253 DMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYDRPEN---------LCILNEYIGKGIVGIQGPF-YQGTGTFHRR 322 (595)
Q Consensus 253 D~~~~~pd~L~~~v~~f~d~~~d~~vg~VQ~pq~f~d~~~~---------~~~f~~~~~~g~~~~~~~~-~~Gtg~~~rr 322 (595)
|+++ +|++|.+++.+|.+ .++++++||++..+.+.-.+ ...++....++....+... +.|++.++||
T Consensus 94 D~~~-~~~~l~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr 170 (241)
T cd06427 94 EDAP-DPDQLKKAVAAFAR--LDDKLACVQAPLNYYNARENWLTRMFALEYAAWFDYLLPGLARLGLPIPLGGTSNHFRT 170 (241)
T ss_pred CCCC-ChHHHHHHHHHHHh--cCCCEEEEeCceEeeCCCccHHHHHHHHHHHHHHHHHHHHHHhcCCeeecCCchHHhhH
Confidence 9997 79999999999852 34799999987655521111 1112223334443333333 2455556666
Q ss_pred hhhhcccchhhhhccchhHHHHHHhhCCcHHHHHHHHHhhcCCcCCCCCchhhhHHHHhHhhccccccCCCcCccccCCC
Q 007647 323 DVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLY 402 (595)
Q Consensus 323 ~al~g~~~~~~~~~~~~~~~~~~~~~g~s~~f~~s~~~~~r~~~~~~~~~~~~~~~~~~~vg~c~ye~~~~w~~~~G~~~ 402 (595)
+++ +++| ||++
T Consensus 171 ~~~-------------------------------------------------------~~vg--------------g~~~ 181 (241)
T cd06427 171 DVL-------------------------------------------------------RELG--------------GWDP 181 (241)
T ss_pred HHH-------------------------------------------------------HHcC--------------CCCc
Confidence 655 4666 7887
Q ss_pred CCccchHHHHHHHHhCCcEEEEeCCCCcceeccCCCCHHHHHHHHHHhhhhhHHHHHh
Q 007647 403 GATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFS 460 (595)
Q Consensus 403 ~~itED~~t~~~l~~~Gwr~~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G~~q~~~~ 460 (595)
...+||+++++|++.+||++++++ . ..++..|+|++++++||.||++|.+|++..
T Consensus 182 ~~~~eD~~l~~rl~~~G~r~~~~~--~-~~~~~~~~~~~~~~~q~~Rw~~g~~~~~~~ 236 (241)
T cd06427 182 FNVTEDADLGLRLARAGYRTGVLN--S-TTLEEANNALGNWIRQRSRWIKGYMQTWLV 236 (241)
T ss_pred ccchhhHHHHHHHHHCCceEEEec--c-cccccCcHhHHHHHHHHHHHhccHHHHHHH
Confidence 788999999999999999999996 2 347889999999999999999999999964
No 23
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=99.98 E-value=3.1e-31 Score=262.89 Aligned_cols=223 Identities=32% Similarity=0.500 Sum_probs=179.8
Q ss_pred CCeEEEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhcccccCCccc
Q 007647 93 PPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFR 172 (595)
Q Consensus 93 P~V~V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~r~~~~ 172 (595)
|.|+|+||+|| |+.+.++++|.|+++++||.++++|+|+|||++|.|.+.+.+.. .
T Consensus 1 p~vsviip~~n---~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~----------~----------- 56 (234)
T cd06421 1 PTVDVFIPTYN---EPLEIVRKTLRAALAIDYPHDKLRVYVLDDGRRPELRALAAELG----------V----------- 56 (234)
T ss_pred CceEEEEecCC---CcHHHHHHHHHHHHhcCCCcccEEEEEEcCCCchhHHHHHHHhh----------c-----------
Confidence 78999999999 55568999999999999998779999999999998876554321 0
Q ss_pred ccCCCCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEEcC
Q 007647 173 YFPDSEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDC 252 (595)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl~~DA 252 (595)
. .+++++.+++ +.++|++|+|.|++ .+++|||+++|+
T Consensus 57 ----------------------------------~-~~~~~~~~~~----~~~~~~~~~n~~~~----~a~~d~i~~lD~ 93 (234)
T cd06421 57 ----------------------------------E-YGYRYLTRPD----NRHAKAGNLNNALA----HTTGDFVAILDA 93 (234)
T ss_pred ----------------------------------c-cCceEEEeCC----CCCCcHHHHHHHHH----hCCCCEEEEEcc
Confidence 0 1345555543 45789999999999 689999999999
Q ss_pred CCCCCchHHHHHHHhhhcCCCCCCcEEEEeCCcccc--Cch---hh-----hHhhHhhhhhhhcccCCceeccccceeeh
Q 007647 253 DMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFY--DRP---EN-----LCILNEYIGKGIVGIQGPFYQGTGTFHRR 322 (595)
Q Consensus 253 D~~~~~pd~L~~~v~~f~d~~~d~~vg~VQ~pq~f~--d~~---~~-----~~~f~~~~~~g~~~~~~~~~~Gtg~~~rr 322 (595)
|.++ +|++|.+++..|. .++++++|++++.+. +.. .. ...++.....+.+.++...+.|++.++||
T Consensus 94 D~~~-~~~~l~~l~~~~~---~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~ 169 (234)
T cd06421 94 DHVP-TPDFLRRTLGYFL---DDPKVALVQTPQFFYNPDPFDWLADGAPNEQELFYGVIQPGRDRWGAAFCCGSGAVVRR 169 (234)
T ss_pred ccCc-CccHHHHHHHHHh---cCCCeEEEecceEEecCCcchhHHHHHHHHHHHHHHHHHHHHhhcCCceecCceeeEeH
Confidence 9997 7999999999985 458999999988776 221 11 33444445555555556677888888888
Q ss_pred hhhhcccchhhhhccchhHHHHHHhhCCcHHHHHHHHHhhcCCcCCCCCchhhhHHHHhHhhccccccCCCcCccccCCC
Q 007647 323 DVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLY 402 (595)
Q Consensus 323 ~al~g~~~~~~~~~~~~~~~~~~~~~g~s~~f~~s~~~~~r~~~~~~~~~~~~~~~~~~~vg~c~ye~~~~w~~~~G~~~ 402 (595)
+++ +++| ||+.
T Consensus 170 ~~~-------------------------------------------------------~~ig--------------~~~~ 180 (234)
T cd06421 170 EAL-------------------------------------------------------DEIG--------------GFPT 180 (234)
T ss_pred HHH-------------------------------------------------------HHhC--------------CCCc
Confidence 877 2455 7887
Q ss_pred CCccchHHHHHHHHhCCcEEEEeCCCCcceeccCCCCHHHHHHHHHHhhhhhHHH
Q 007647 403 GATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEI 457 (595)
Q Consensus 403 ~~itED~~t~~~l~~~Gwr~~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G~~q~ 457 (595)
..+.||++++.+++++||+++|.+ .+.+++..|.+++++++||.||.+|++|+
T Consensus 181 ~~~~eD~~l~~r~~~~g~~i~~~~--~~~~~~~~~~~~~~~~~q~~rw~~~~~~~ 233 (234)
T cd06421 181 DSVTEDLATSLRLHAKGWRSVYVP--EPLAAGLAPETLAAYIKQRLRWARGMLQI 233 (234)
T ss_pred cceeccHHHHHHHHHcCceEEEec--CccccccCCccHHHHHHHHHHHhcCCeee
Confidence 888999999999999999999997 46788999999999999999999999885
No 24
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.
Probab=99.97 E-value=4.2e-30 Score=256.26 Aligned_cols=224 Identities=23% Similarity=0.289 Sum_probs=167.9
Q ss_pred EEEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchH-HHHHHHHHhhhhhhhhhhhcccccCCccccc
Q 007647 96 DMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNF-YSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 174 (595)
Q Consensus 96 ~V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~-~~l~e~~~~a~~w~p~c~~~gv~~r~~~~~~ 174 (595)
+|+||+|| |+++.+.+++.++++++|| +++|+|+||+++|.|. +.+++. |++++
T Consensus 1 siiip~~n---e~~~~l~~~l~sl~~q~~~--~~eiiVvdd~s~D~t~~~~i~~~----------~~~~~---------- 55 (236)
T cd06435 1 SIHVPCYE---EPPEMVKETLDSLAALDYP--NFEVIVIDNNTKDEALWKPVEAH----------CAQLG---------- 55 (236)
T ss_pred CeeEeeCC---CcHHHHHHHHHHHHhCCCC--CcEEEEEeCCCCchhHHHHHHHH----------HHHhC----------
Confidence 58999999 5566999999999999999 6899999999999875 333221 22221
Q ss_pred CCCCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEEcCCC
Q 007647 175 PDSEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDM 254 (595)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl~~DAD~ 254 (595)
++++++..++ +.++|++|+|.|++.. ..++|+|+++|+|.
T Consensus 56 ----------------------------------~~i~~i~~~~----~~G~~~~a~n~g~~~a--~~~~d~i~~lD~D~ 95 (236)
T cd06435 56 ----------------------------------ERFRFFHVEP----LPGAKAGALNYALERT--APDAEIIAVIDADY 95 (236)
T ss_pred ----------------------------------CcEEEEEcCC----CCCCchHHHHHHHHhc--CCCCCEEEEEcCCC
Confidence 2456665543 3457999999999952 13589999999999
Q ss_pred CCCchHHHHHHHhhhcCCCCCCcEEEEeCCccccC----chhh-----hHhhHhhhhhhhcccCCceeccccceeehhhh
Q 007647 255 YANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYD----RPEN-----LCILNEYIGKGIVGIQGPFYQGTGTFHRRDVV 325 (595)
Q Consensus 255 ~~~~pd~L~~~v~~f~d~~~d~~vg~VQ~pq~f~d----~~~~-----~~~f~~~~~~g~~~~~~~~~~Gtg~~~rr~al 325 (595)
++ +|++|.+++..| .++++++|+++..+.+ ++.. ...++..........+.....|+++++||+++
T Consensus 96 ~~-~~~~l~~l~~~~----~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~ 170 (236)
T cd06435 96 QV-EPDWLKRLVPIF----DDPRVGFVQAPQDYRDGEESLFKRMCYAEYKGFFDIGMVSRNERNAIIQHGTMCLIRRSAL 170 (236)
T ss_pred Cc-CHHHHHHHHHHh----cCCCeeEEecCccccCCCccHHHHHHhHHHHHHHHHHhccccccCceEEecceEEEEHHHH
Confidence 97 799999999887 4688999998865542 2211 01111111112222233345677777888776
Q ss_pred hcccchhhhhccchhHHHHHHhhCCcHHHHHHHHHhhcCCcCCCCCchhhhHHHHhHhhccccccCCCcCccccCCCCCc
Q 007647 326 YGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGAT 405 (595)
Q Consensus 326 ~g~~~~~~~~~~~~~~~~~~~~~g~s~~f~~s~~~~~r~~~~~~~~~~~~~~~~~~~vg~c~ye~~~~w~~~~G~~~~~i 405 (595)
+++| ||++...
T Consensus 171 -------------------------------------------------------~~iG--------------gf~~~~~ 181 (236)
T cd06435 171 -------------------------------------------------------DDVG--------------GWDEWCI 181 (236)
T ss_pred -------------------------------------------------------HHhC--------------CCCCccc
Confidence 2566 7888888
Q ss_pred cchHHHHHHHHhCCcEEEEeCCCCcceeccCCCCHHHHHHHHHHhhhhhHHHHHh
Q 007647 406 AEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFS 460 (595)
Q Consensus 406 tED~~t~~~l~~~Gwr~~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G~~q~~~~ 460 (595)
.||++++++++++||++.|++ .+..++..|+++.++++||.||++|++|++.+
T Consensus 182 ~eD~dl~~r~~~~G~~~~~~~--~~~~~~~~~~~~~~~~~q~~rw~~g~~~~~~~ 234 (236)
T cd06435 182 TEDSELGLRMHEAGYIGVYVA--QSYGHGLIPDTFEAFKKQRFRWAYGAVQILKK 234 (236)
T ss_pred cchHHHHHHHHHCCcEEEEcc--hhhccCcCcccHHHHHHHHHHHhcchhhhhhc
Confidence 999999999999999999997 35778899999999999999999999999963
No 25
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=99.97 E-value=4.4e-28 Score=260.06 Aligned_cols=224 Identities=12% Similarity=0.129 Sum_probs=161.8
Q ss_pred CCCCCeEEEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhcccccCC
Q 007647 90 QELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRA 169 (595)
Q Consensus 90 ~~~P~V~V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~r~ 169 (595)
+..|+|+|+||+||||. .+.++|+|++++||| ++||+|+||+++|.|.+.+++.++ ++
T Consensus 38 ~~~p~VSViiP~~nee~----~l~~~L~Sl~~q~Yp--~~EIivvdd~s~D~t~~iv~~~~~----------~~------ 95 (373)
T TIGR03472 38 RAWPPVSVLKPLHGDEP----ELYENLASFCRQDYP--GFQMLFGVQDPDDPALAVVRRLRA----------DF------ 95 (373)
T ss_pred CCCCCeEEEEECCCCCh----hHHHHHHHHHhcCCC--CeEEEEEeCCCCCcHHHHHHHHHH----------hC------
Confidence 34799999999999875 899999999999999 599999999999998876654321 00
Q ss_pred cccccCCCCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEE
Q 007647 170 PFRYFPDSEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLN 249 (595)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl~ 249 (595)
...+++++..+++. ..++|++|+|++++ .+++|++++
T Consensus 96 -------------------------------------p~~~i~~v~~~~~~--G~~~K~~~l~~~~~----~a~ge~i~~ 132 (373)
T TIGR03472 96 -------------------------------------PDADIDLVIDARRH--GPNRKVSNLINMLP----HARHDILVI 132 (373)
T ss_pred -------------------------------------CCCceEEEECCCCC--CCChHHHHHHHHHH----hccCCEEEE
Confidence 01246667544333 34579999999988 689999999
Q ss_pred EcCCCCCCchHHHHHHHhhhcCCCCCCcEEEEeCCcccc--Cch-hh-hHh-----hHhhhhhhhcccC-Cceeccccce
Q 007647 250 VDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFY--DRP-EN-LCI-----LNEYIGKGIVGIQ-GPFYQGTGTF 319 (595)
Q Consensus 250 ~DAD~~~~~pd~L~~~v~~f~d~~~d~~vg~VQ~pq~f~--d~~-~~-~~~-----f~~~~~~g~~~~~-~~~~~Gtg~~ 319 (595)
+|||.++ +||+|++++..| .+++++.|+++.... +.+ .. ... |+...... ...+ ..++.|++.+
T Consensus 133 ~DaD~~~-~p~~L~~lv~~~----~~~~v~~V~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~G~~~a 206 (373)
T TIGR03472 133 ADSDISV-GPDYLRQVVAPL----ADPDVGLVTCLYRGRPVPGFWSRLGAMGINHNFLPSVMVA-RALGRARFCFGATMA 206 (373)
T ss_pred ECCCCCc-ChhHHHHHHHHh----cCCCcceEeccccCCCCCCHHHHHHHHHhhhhhhHHHHHH-HhccCCccccChhhh
Confidence 9999997 799999999998 578899998754322 111 11 000 11100000 1111 1223455555
Q ss_pred eehhhhhcccchhhhhccchhHHHHHHhhCCcHHHHHHHHHhhcCCcCCCCCchhhhHHHHhHhhccccccCCCcCcccc
Q 007647 320 HRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVG 399 (595)
Q Consensus 320 ~rr~al~g~~~~~~~~~~~~~~~~~~~~~g~s~~f~~s~~~~~r~~~~~~~~~~~~~~~~~~~vg~c~ye~~~~w~~~~G 399 (595)
+||+++ +++| |
T Consensus 207 ~RR~~l-------------------------------------------------------~~iG--------------G 217 (373)
T TIGR03472 207 LRRATL-------------------------------------------------------EAIG--------------G 217 (373)
T ss_pred eeHHHH-------------------------------------------------------HHcC--------------C
Confidence 666555 4666 6
Q ss_pred CCC--CCccchHHHHHHHHhCCcEEEEeCCCCcceeccCCCCHHHHHHHHHHhhhhhH
Q 007647 400 CLY--GATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLL 455 (595)
Q Consensus 400 ~~~--~~itED~~t~~~l~~~Gwr~~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G~~ 455 (595)
|+. ++++||++++.+++++||++.|.+ .+......|+|++++++||.||++...
T Consensus 218 f~~~~~~~~ED~~l~~~i~~~G~~v~~~~--~~v~~~~~~~s~~~~~~q~~RW~r~~~ 273 (373)
T TIGR03472 218 LAALAHHLADDYWLGELVRALGLRVVLAP--VVVDTDVHETSFATLLAHELRWSRTIR 273 (373)
T ss_pred hHHhcccchHHHHHHHHHHHcCCeEEecc--hhhhcCCCccCHHHHHHHHHHHHhhhh
Confidence 764 578999999999999999999986 356677778999999999999975543
No 26
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A.
Probab=99.96 E-value=1.7e-30 Score=257.55 Aligned_cols=220 Identities=22% Similarity=0.285 Sum_probs=142.0
Q ss_pred CCeEEEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhcccccCCccc
Q 007647 93 PPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFR 172 (595)
Q Consensus 93 P~V~V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~r~~~~ 172 (595)
|.|+|+||+|||+. .+.++|.++++++|| +++|+|+||++++.|.+.+++.. ++++
T Consensus 1 P~v~Vvip~~~~~~----~l~~~l~sl~~~~~~--~~~v~vvd~~~~~~~~~~~~~~~----------~~~~-------- 56 (228)
T PF13641_consen 1 PRVSVVIPAYNEDD----VLRRCLESLLAQDYP--RLEVVVVDDGSDDETAEILRALA----------ARYP-------- 56 (228)
T ss_dssp --EEEE--BSS-HH----HHHHHHHHHTTSHHH--TEEEEEEEE-SSS-GCTTHHHHH----------HTTG--------
T ss_pred CEEEEEEEecCCHH----HHHHHHHHHHcCCCC--CeEEEEEECCCChHHHHHHHHHH----------HHcC--------
Confidence 78999999999543 999999999999997 79999999999998775554322 1111
Q ss_pred ccCCCCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEEcC
Q 007647 173 YFPDSEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDC 252 (595)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl~~DA 252 (595)
. -+++++.+++++ ..++|++|+|.+++ .+++|+|+++|+
T Consensus 57 --------------------~---------------~~v~vi~~~~~~--g~~~k~~a~n~~~~----~~~~d~i~~lD~ 95 (228)
T PF13641_consen 57 --------------------R---------------VRVRVIRRPRNP--GPGGKARALNEALA----AARGDYILFLDD 95 (228)
T ss_dssp --------------------G----------------GEEEEE----H--HHHHHHHHHHHHHH----H---SEEEEE-S
T ss_pred --------------------C---------------CceEEeecCCCC--CcchHHHHHHHHHH----hcCCCEEEEECC
Confidence 0 145777765422 12379999999999 578999999999
Q ss_pred CCCCCchHHHHHHHhhhcCCCCCCcEEEEeCCccccC---chhh-hHhhH----hhhhhhhcccCCceeccccceeehhh
Q 007647 253 DMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYD---RPEN-LCILN----EYIGKGIVGIQGPFYQGTGTFHRRDV 324 (595)
Q Consensus 253 D~~~~~pd~L~~~v~~f~d~~~d~~vg~VQ~pq~f~d---~~~~-~~~f~----~~~~~g~~~~~~~~~~Gtg~~~rr~a 324 (595)
|+++ +|++|.+++.+| .++++++|+++..+.+ .+.. ...++ .....+....+...++|+++++||++
T Consensus 96 D~~~-~p~~l~~~~~~~----~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~ 170 (228)
T PF13641_consen 96 DTVL-DPDWLERLLAAF----ADPGVGAVGGPVFPDNDRNWLTRLQDLFFARWHLRFRSGRRALGVAFLSGSGMLFRRSA 170 (228)
T ss_dssp SEEE--CHHHHHHHHHH----HBSS--EEEEEEEETTCCCEEEE-TT--S-EETTTS-TT-B----S-B--TEEEEEHHH
T ss_pred CcEE-CHHHHHHHHHHH----HhCCCCeEeeeEeecCCCCHHHHHHHHHHhhhhhhhhhhhcccceeeccCcEEEEEHHH
Confidence 9997 899999999999 4689999997764441 1111 11111 11223333444455678888888887
Q ss_pred hhcccchhhhhccchhHHHHHHhhCCcHHHHHHHHHhhcCCcCCCCCchhhhHHHHhHhhccccccCCCcCccccCCCCC
Q 007647 325 VYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGA 404 (595)
Q Consensus 325 l~g~~~~~~~~~~~~~~~~~~~~~g~s~~f~~s~~~~~r~~~~~~~~~~~~~~~~~~~vg~c~ye~~~~w~~~~G~~~~~ 404 (595)
+ +++| ||++..
T Consensus 171 ~-------------------------------------------------------~~~g--------------~fd~~~ 181 (228)
T PF13641_consen 171 L-------------------------------------------------------EEVG--------------GFDPFI 181 (228)
T ss_dssp H-------------------------------------------------------HHH---------------S--SSS
T ss_pred H-------------------------------------------------------HHhC--------------CCCCCC
Confidence 7 2556 788888
Q ss_pred ccchHHHHHHHHhCCcEEEEeCCCCcceeccCCCCHHHHHHHHHHhhhh
Q 007647 405 TAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATG 453 (595)
Q Consensus 405 itED~~t~~~l~~~Gwr~~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G 453 (595)
..||.+++++++++||++.|++ .+.++...|.|++++++||.||++|
T Consensus 182 ~~eD~~l~~r~~~~G~~~~~~~--~~~v~~~~~~~~~~~~~q~~RW~~g 228 (228)
T PF13641_consen 182 LGEDFDLCLRLRAAGWRIVYAP--DALVYHEEPSSLKAFFKQRFRWSRG 228 (228)
T ss_dssp SSHHHHHHHHHHHTT--EEEEE--EEEEEE--SSSTHHHHHHHHHHH--
T ss_pred cccHHHHHHHHHHCCCcEEEEC--CcEEEEeCCCCHHHHHHHHhccCcC
Confidence 8999999999999999999997 5788999999999999999999988
No 27
>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=99.96 E-value=2e-26 Score=260.52 Aligned_cols=237 Identities=12% Similarity=0.080 Sum_probs=170.1
Q ss_pred cCCCCCeEEEEeccCCCCCChhHHHHHHHHHH-hcCCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhccccc
Q 007647 89 IQELPPVDMFVTTADAELEPPIITVNTVLSLL-AVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQI 167 (595)
Q Consensus 89 ~~~~P~V~V~IptynE~~Ep~~vv~~tl~s~l-~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~ 167 (595)
..+.|.|+|+||+|||++ +|.++|++++ ++||| +++|+|+.+.++++|.+++++.+
T Consensus 67 ~~~~~~vsIlVPa~nE~~----VI~~~v~~ll~~ldYp--~~~I~v~~~~nD~~T~~~~~~~~----------------- 123 (703)
T PRK15489 67 ERDEQPLAIMVPAWKEYD----VIAKMIENMLATLDYR--RYVIFVGTYPNDAETITEVERMR----------------- 123 (703)
T ss_pred ccCCCceEEEEeCCCcHH----HHHHHHHHHHhcCCCC--CeEEEEEecCCCccHHHHHHHHh-----------------
Confidence 456799999999999987 9999999986 89999 78999953333335655554432
Q ss_pred CCcccccCCCCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcC--C-CCCC
Q 007647 168 RAPFRYFPDSEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSG--L-MTNA 244 (595)
Q Consensus 168 r~~~~~~~~~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~--~-~~~~ 244 (595)
..+|+++.|..++ ....+||.|||+++...- . ...+
T Consensus 124 --------------------------------------~~~p~~~~v~~~~---~gp~gKa~ALN~~l~~~~~~e~~~~~ 162 (703)
T PRK15489 124 --------------------------------------RRYKRLVRVEVPH---DGPTCKADCLNWIIQAIFRYEAGHGI 162 (703)
T ss_pred --------------------------------------ccCCcEEEEEcCC---CCCCCHHHHHHHHHHHHHhhhhhccC
Confidence 1246666666542 134789999999998520 0 1133
Q ss_pred C--EEEEEcCCCCCCchHHHHHHHhhhcCCCCCCcEEEEeCCcccc-Cch----hh-----hHhhHhhhhhhhcccCCce
Q 007647 245 P--FMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFY-DRP----EN-----LCILNEYIGKGIVGIQGPF 312 (595)
Q Consensus 245 d--~vl~~DAD~~~~~pd~L~~~v~~f~d~~~d~~vg~VQ~pq~f~-d~~----~~-----~~~f~~~~~~g~~~~~~~~ 312 (595)
+ .|+++|||.++ +|++|+.+ .++. .++ .+||.|..-. ++. +. ....++..+.++...++++
T Consensus 163 ~fa~vvi~DAEd~~-~P~~L~~~-~~~~---~~~--~~iQ~pV~~~~~~~~~~l~~~~~~Efa~~~~~~l~~r~~l~~~i 235 (703)
T PRK15489 163 EFAGVILHDSEDVL-HPLELKYF-NYLL---PRK--DLVQLPVLSLERKWYEWVAGTYMDEFAEWHQKDLVVRESLTGTV 235 (703)
T ss_pred ccceEEEEcCCCCC-ChhHHHHH-Hhhc---CCc--ceeeeeeccCCCccccHHHHHHHHHHHHHhhhHHHHHHHcCCce
Confidence 3 49999999996 99999754 6765 334 4689874312 221 11 3445566678888888877
Q ss_pred e-ccccceeehhhhhcccchhhhhccchhHHHHHHhhCCcHHHHHHHHHhhcCCcCCCCCchhhhHHHHhHhhccccccC
Q 007647 313 Y-QGTGTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYG 391 (595)
Q Consensus 313 ~-~Gtg~~~rr~al~g~~~~~~~~~~~~~~~~~~~~~g~s~~f~~s~~~~~r~~~~~~~~~~~~~~~~~~~vg~c~ye~~ 391 (595)
. .|+|+.+||++|. ++.+.|+
T Consensus 236 pl~Gv~~~frr~aL~----------------------------------------------------~l~~~gg------ 257 (703)
T PRK15489 236 PSAGVGTCFSRRALL----------------------------------------------------ALMKERG------ 257 (703)
T ss_pred eccCcceeeeHHHHH----------------------------------------------------HHHHhcC------
Confidence 5 6899999999982 1112331
Q ss_pred CCcCccccCCCCCccchHHHHHHHHhCCcEEEEeCC---------------------CCcceeccCCCCHHHHHHHHHHh
Q 007647 392 SSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLP---------------------IPHAFLGCASPSGPAGMRQQKRW 450 (595)
Q Consensus 392 ~~w~~~~G~~~~~itED~~t~~~l~~~Gwr~~y~~~---------------------~~~~~~g~aP~tl~~~~~Qr~RW 450 (595)
|. ||+.+++|||+++|+||+++|||+.|+.- ...+..+..|.|+++.++||.||
T Consensus 258 --~~---~~n~~sLTED~Dlg~RL~~~G~r~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~tre~fP~~~~a~~rQk~RW 332 (703)
T PRK15489 258 --NQ---PFNTSSLTEDYDFSFRLAELGMQEIFVRFPVQFRVRRTSWFGPRRERTREMLLCVREYFPDTFRTAYRQKARW 332 (703)
T ss_pred --CC---CCCCCCchHhHHHHHHHHHCCCceEEEEEeccccccccccccccccccccCceeehhhCcHHHHHHHHHHHHH
Confidence 11 68899999999999999999999999211 12567788999999999999999
Q ss_pred hhhhH-HHHH
Q 007647 451 ATGLL-EILF 459 (595)
Q Consensus 451 a~G~~-q~~~ 459 (595)
..|-. |...
T Consensus 333 ~~Gi~~q~~~ 342 (703)
T PRK15489 333 VLGIAFQGWE 342 (703)
T ss_pred HhHHHHhhHH
Confidence 99988 7764
No 28
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin. Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.
Probab=99.95 E-value=2e-28 Score=247.45 Aligned_cols=216 Identities=14% Similarity=0.043 Sum_probs=150.0
Q ss_pred EEEeccCCCCCChhHHHHHHHHHHhcCCC--------CCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhcccccC
Q 007647 97 MFVTTADAELEPPIITVNTVLSLLAVDYP--------VHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIR 168 (595)
Q Consensus 97 V~IptynE~~Ep~~vv~~tl~s~l~ldYP--------~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~r 168 (595)
|+||+||| ++.+|++||+|++++||| .++++|+|+||||+|.
T Consensus 1 v~ip~yNE---~~~~i~~~l~sv~~q~y~~~~~~~~~~~~~evivv~Dgs~d~--------------------------- 50 (244)
T cd04190 1 VCVTMYNE---DEEELARTLDSILKNDYPFCARGGDSWKKIVVCVIFDGAIKK--------------------------- 50 (244)
T ss_pred CEEeeecC---CHHHHHHHHHHHHHhhHHHHhcCCCCccEEEEEEEeCCcccc---------------------------
Confidence 68999995 444999999999999999 7899999999999981
Q ss_pred CcccccCCCCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChH-------HHHHHHHHhcCCC
Q 007647 169 APFRYFPDSEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKA-------GAMNVLTRVSGLM 241 (595)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KA-------gaLN~~l~~~~~~ 241 (595)
. .||+ .++|.++. .
T Consensus 51 ----------------------------------------------~---------~gk~~~~~~~~~~~~~~~~----~ 71 (244)
T cd04190 51 ----------------------------------------------N---------RGKRDSQLWFFNYFCRVLF----P 71 (244)
T ss_pred ----------------------------------------------c---------CcchHHHHHHHHHHHHHhh----c
Confidence 0 0222 24666666 6
Q ss_pred CCCCEEEEEcCCCCCCchHHHHHHHhhhcCCCCCCcEEEEeCCccccCchhh-----hH----hhHhhhhhhhcccCCc-
Q 007647 242 TNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYDRPEN-----LC----ILNEYIGKGIVGIQGP- 311 (595)
Q Consensus 242 ~~~d~vl~~DAD~~~~~pd~L~~~v~~f~d~~~d~~vg~VQ~pq~f~d~~~~-----~~----~f~~~~~~g~~~~~~~- 311 (595)
+++|+|+++|||+++ +||+|++++.+|. .||++|.|++.+...+...+ +. ........+.+..+..
T Consensus 72 a~~e~i~~~DaD~~~-~~~~l~~l~~~~~---~~p~vg~v~g~~~~~~~~~~~~~~~q~~ey~~~~~~~~~~~s~~g~~~ 147 (244)
T cd04190 72 DDPEFILLVDADTKF-DPDSIVQLYKAMD---KDPEIGGVCGEIHPMGKKQGPLVMYQVFEYAISHWLDKAFESVFGFVT 147 (244)
T ss_pred CCCCEEEEECCCCcC-CHhHHHHHHHHHH---hCCCEEEEEeeeEEcCCcchhHHHhHheehhhhhhhcccHHHcCCceE
Confidence 899999999999997 8999999999985 57899999987655422111 11 0001111222233333
Q ss_pred eeccccceeehhhhhcccchhhhhccchhHHHHHHhhCCcHHHHHHHHHhhcCCcCCCCCchhhhHHHHhHhhccccccC
Q 007647 312 FYQGTGTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYG 391 (595)
Q Consensus 312 ~~~Gtg~~~rr~al~g~~~~~~~~~~~~~~~~~~~~~g~s~~f~~s~~~~~r~~~~~~~~~~~~~~~~~~~vg~c~ye~~ 391 (595)
...|++.++|++++....... .. .+.. +..++ ...+ |
T Consensus 148 ~~~G~~~~~R~~~l~~~~~~~-~~-------------------~~~~--~~~~~-------------~~~~-~------- 184 (244)
T cd04190 148 CLPGCFSMYRIEALKGDNGGK-GP-------------------LLDY--AYLTN-------------TVDS-L------- 184 (244)
T ss_pred ECCCceEEEEehhhcCCcccc-cc-------------------chhh--ccccC-------------cccc-h-------
Confidence 346888899999884321000 00 0000 00000 0000 0
Q ss_pred CCcCccccCCCCCccchHHHHHHHHhCCcEEEE--eCCCCcceeccCCCCHHHHHHHHHHhhhhhHH
Q 007647 392 SSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGY--CLPIPHAFLGCASPSGPAGMRQQKRWATGLLE 456 (595)
Q Consensus 392 ~~w~~~~G~~~~~itED~~t~~~l~~~Gwr~~y--~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G~~q 456 (595)
.+....+++||.+++++|.++||++.| ++ ++.+++++|+|++++++||.||++|++.
T Consensus 185 ------~~~~~~~~~ED~~l~~~l~~~G~~~~~~~~~--~a~~~~~~p~s~~~~~~QR~RW~~g~~~ 243 (244)
T cd04190 185 ------HKKNNLDLGEDRILCTLLLKAGPKRKYLYVP--GAVAETDVPETFVELLSQRRRWINSTIA 243 (244)
T ss_pred ------HHHHHHhHhcccceeHHHhccCCccEEEEec--ccEEEEECCCCHHHHHHHhHhhhccccc
Confidence 022335789999999999999999999 75 5788999999999999999999999863
No 29
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=99.95 E-value=1.4e-27 Score=232.62 Aligned_cols=191 Identities=16% Similarity=0.156 Sum_probs=153.5
Q ss_pred CCeEEEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhcccccCCccc
Q 007647 93 PPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFR 172 (595)
Q Consensus 93 P~V~V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~r~~~~ 172 (595)
|.|+|+||+|||+. .+.++|.++++++|| +++|+|+||+|+|.|.+.+++..+ +
T Consensus 1 p~vsviip~~n~~~----~l~~~L~sl~~q~~~--~~eiivVdd~s~d~t~~~~~~~~~----------~---------- 54 (196)
T cd02520 1 PGVSILKPLCGVDP----NLYENLESFFQQDYP--KYEILFCVQDEDDPAIPVVRKLIA----------K---------- 54 (196)
T ss_pred CCeEEEEecCCCCc----cHHHHHHHHHhccCC--CeEEEEEeCCCcchHHHHHHHHHH----------H----------
Confidence 68999999999765 689999999999999 699999999999998876654321 1
Q ss_pred ccCCCCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCC--cEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEE
Q 007647 173 YFPDSEPSDSSSGELLQDWKNMKVISENKGGLSDEIP--HLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNV 250 (595)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p--~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl~~ 250 (595)
+| ++.++...++. ...+|++|+|.|++ .+++|+++++
T Consensus 55 -----------------------------------~~~~~~~~~~~~~~~--g~~~~~~~~n~g~~----~a~~d~i~~~ 93 (196)
T cd02520 55 -----------------------------------YPNVDARLLIGGEKV--GINPKVNNLIKGYE----EARYDILVIS 93 (196)
T ss_pred -----------------------------------CCCCcEEEEecCCcC--CCCHhHHHHHHHHH----hCCCCEEEEE
Confidence 12 24455443322 23468999999999 6899999999
Q ss_pred cCCCCCCchHHHHHHHhhhcCCCCCCcEEEEeCCccccCchhhhHhhHhhhhhhhcccCCceeccccceeehhhhhcccc
Q 007647 251 DCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYDRPENLCILNEYIGKGIVGIQGPFYQGTGTFHRRDVVYGLCL 330 (595)
Q Consensus 251 DAD~~~~~pd~L~~~v~~f~d~~~d~~vg~VQ~pq~f~d~~~~~~~f~~~~~~g~~~~~~~~~~Gtg~~~rr~al~g~~~ 330 (595)
|+|+.+ +|++|.+++..+ .++++++|++. ...|+++++||+++.
T Consensus 94 D~D~~~-~~~~l~~l~~~~----~~~~~~~v~~~---------------------------~~~g~~~~~r~~~~~---- 137 (196)
T cd02520 94 DSDISV-PPDYLRRMVAPL----MDPGVGLVTCL---------------------------CAFGKSMALRREVLD---- 137 (196)
T ss_pred CCCceE-ChhHHHHHHHHh----hCCCCCeEEee---------------------------cccCceeeeEHHHHH----
Confidence 999997 799999999987 45778888732 346788899998772
Q ss_pred hhhhhccchhHHHHHHhhCCcHHHHHHHHHhhcCCcCCCCCchhhhHHHHhHhhccccccCCCcCccccCCC--CCccch
Q 007647 331 DQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLY--GATAED 408 (595)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~g~s~~f~~s~~~~~r~~~~~~~~~~~~~~~~~~~vg~c~ye~~~~w~~~~G~~~--~~itED 408 (595)
++| ||+. ..+.||
T Consensus 138 ---------------------------------------------------~~g--------------gf~~~~~~~~eD 152 (196)
T cd02520 138 ---------------------------------------------------AIG--------------GFEAFADYLAED 152 (196)
T ss_pred ---------------------------------------------------hcc--------------ChHHHhHHHHHH
Confidence 344 5643 356899
Q ss_pred HHHHHHHHhCCcEEEEeCCCCcceeccCCCCHHHHHHHHHHhhhh
Q 007647 409 NLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATG 453 (595)
Q Consensus 409 ~~t~~~l~~~Gwr~~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G 453 (595)
+++++++..+||++.|++ .+.++...|.+++++++||.||++.
T Consensus 153 ~~l~~rl~~~G~~i~~~~--~~~~~~~~~~~~~~~~~q~~rw~~~ 195 (196)
T cd02520 153 YFLGKLIWRLGYRVVLSP--YVVMQPLGSTSLASFWRRQLRWSRT 195 (196)
T ss_pred HHHHHHHHHcCCeEEEcc--hheeccCCcccHHHHHHHHHHHhcc
Confidence 999999999999999996 4678899999999999999999874
No 30
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.94 E-value=4e-26 Score=224.94 Aligned_cols=218 Identities=16% Similarity=0.203 Sum_probs=159.3
Q ss_pred EEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhcccccCCcccccCC
Q 007647 97 MFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFPD 176 (595)
Q Consensus 97 V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~r~~~~~~~~ 176 (595)
|+||+|||++ .+.+||.+++.++||.++++|+|+||||+|.|.+.++...+
T Consensus 1 viip~~n~~~----~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~------------------------- 51 (229)
T cd04192 1 VVIAARNEAE----NLPRLLQSLSALDYPKEKFEVILVDDHSTDGTVQILEFAAA------------------------- 51 (229)
T ss_pred CEEEecCcHH----HHHHHHHHHHhCCCCCCceEEEEEcCCCCcChHHHHHHHHh-------------------------
Confidence 6899999654 89999999999999977799999999999998866541110
Q ss_pred CCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEEcCCCCC
Q 007647 177 SEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYA 256 (595)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl~~DAD~~~ 256 (595)
...++++++.++. ....||+.|+|.+++ .+++|+|+++|+|+++
T Consensus 52 -----------------------------~~~~~v~~~~~~~---~~~~g~~~a~n~g~~----~~~~d~i~~~D~D~~~ 95 (229)
T cd04192 52 -----------------------------KPNFQLKILNNSR---VSISGKKNALTTAIK----AAKGDWIVTTDADCVV 95 (229)
T ss_pred -----------------------------CCCcceEEeeccC---cccchhHHHHHHHHH----HhcCCEEEEECCCccc
Confidence 0124566665542 135799999999999 6889999999999997
Q ss_pred CchHHHHHHHhhhcCCCCCCcEEEEeCCcccc--Cchh-h---h-HhhHhhhhhhhcccCCc-eeccccceeehhhhhcc
Q 007647 257 NNPEIVLQAMCLHLGSKNENEFAFIQSPQYFY--DRPE-N---L-CILNEYIGKGIVGIQGP-FYQGTGTFHRRDVVYGL 328 (595)
Q Consensus 257 ~~pd~L~~~v~~f~d~~~d~~vg~VQ~pq~f~--d~~~-~---~-~~f~~~~~~g~~~~~~~-~~~Gtg~~~rr~al~g~ 328 (595)
.|++|.+++..|. +++.++|+++..+. +.+. . . ..+......+..+.+.+ .++|++.++||+++
T Consensus 96 -~~~~l~~l~~~~~----~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~--- 167 (229)
T cd04192 96 -PSNWLLTFVAFIQ----KEQIGLVAGPVIYFKGKSLLAKFQRLDWLSLLGLIAGSFGLGKPFMCNGANMAYRKEAF--- 167 (229)
T ss_pred -CHHHHHHHHHHhh----cCCCcEEeeeeeecCCccHHHHHHHHHHHHHHHHHhhHHHhcCccccccceEEEEHHHH---
Confidence 7999999999873 45566777766544 1111 1 0 01111111122222322 33566677777766
Q ss_pred cchhhhhccchhHHHHHHhhCCcHHHHHHHHHhhcCCcCCCCCchhhhHHHHhHhhccccccCCCcCccccCCC--CCcc
Q 007647 329 CLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLY--GATA 406 (595)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~g~s~~f~~s~~~~~r~~~~~~~~~~~~~~~~~~~vg~c~ye~~~~w~~~~G~~~--~~it 406 (595)
+++| ||++ ...+
T Consensus 168 ----------------------------------------------------~~~g--------------gf~~~~~~~~ 181 (229)
T cd04192 168 ----------------------------------------------------FEVG--------------GFEGNDHIAS 181 (229)
T ss_pred ----------------------------------------------------HHhc--------------CCcccccccc
Confidence 3566 7764 3678
Q ss_pred chHHHHHHHHhCCc-EEEEeCCCCcceeccCCCCHHHHHHHHHHhhhh
Q 007647 407 EDNLTGLVIHSKGW-RSGYCLPIPHAFLGCASPSGPAGMRQQKRWATG 453 (595)
Q Consensus 407 ED~~t~~~l~~~Gw-r~~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G 453 (595)
||.++.++++++|| ++.|++......+...|.+++++++||.||++|
T Consensus 182 eD~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~Rw~~g 229 (229)
T cd04192 182 GDDELLLAKVASKYPKVAYLKNPEALVTTQPVTSWKELLNQRKRWASK 229 (229)
T ss_pred CCHHHHHHHHHhCCCCEEEeeCcchheecCCchhHHHHHHHHHHhhcC
Confidence 99999999999999 998875445677899999999999999999987
No 31
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.
Probab=99.94 E-value=5.5e-25 Score=237.07 Aligned_cols=226 Identities=18% Similarity=0.113 Sum_probs=154.7
Q ss_pred cCCCCCeEEEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhcccccC
Q 007647 89 IQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIR 168 (595)
Q Consensus 89 ~~~~P~V~V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~r 168 (595)
++..|+|+|+||+|||++ .+.+++++++++|||. ++||+|+||+|+|.|.+.+++..+ ++.
T Consensus 36 ~~~~p~VSVIIpa~Ne~~----~L~~~L~sL~~q~yp~-~~eIIVVDd~StD~T~~i~~~~~~----------~~~---- 96 (384)
T TIGR03469 36 PEAWPAVVAVVPARNEAD----VIGECVTSLLEQDYPG-KLHVILVDDHSTDGTADIARAAAR----------AYG---- 96 (384)
T ss_pred CCCCCCEEEEEecCCcHh----HHHHHHHHHHhCCCCC-ceEEEEEeCCCCCcHHHHHHHHHH----------hcC----
Confidence 456899999999999875 9999999999999995 589999999999999877755321 110
Q ss_pred CcccccCCCCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCC-----
Q 007647 169 APFRYFPDSEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTN----- 243 (595)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~----- 243 (595)
..++++++..+.+|. +..||+.|+|.|++ .++
T Consensus 97 --------------------------------------~~~~i~vi~~~~~~~-g~~Gk~~A~n~g~~----~A~~~~~~ 133 (384)
T TIGR03469 97 --------------------------------------RGDRLTVVSGQPLPP-GWSGKLWAVSQGIA----AARTLAPP 133 (384)
T ss_pred --------------------------------------CCCcEEEecCCCCCC-CCcchHHHHHHHHH----HHhccCCC
Confidence 012566765433222 45699999999999 455
Q ss_pred CCEEEEEcCCCCCCchHHHHHHHhhhcCCCCCCcEEEEeCCcccc--Cchhh-----hHhhHhhhh---hhhccc-CCce
Q 007647 244 APFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFY--DRPEN-----LCILNEYIG---KGIVGI-QGPF 312 (595)
Q Consensus 244 ~d~vl~~DAD~~~~~pd~L~~~v~~f~d~~~d~~vg~VQ~pq~f~--d~~~~-----~~~f~~~~~---~g~~~~-~~~~ 312 (595)
+|+++++|||+.+ +||+|++++..+. ++++++|....++. +.+.+ ...++.... ...+.. ....
T Consensus 134 gd~llflDaD~~~-~p~~l~~lv~~~~----~~~~~~vs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (384)
T TIGR03469 134 ADYLLLTDADIAH-GPDNLARLVARAR----AEGLDLVSLMVRLRCESFWEKLLIPAFVFFFQKLYPFRWVNDPRRRTAA 208 (384)
T ss_pred CCEEEEECCCCCC-ChhHHHHHHHHHH----hCCCCEEEecccccCCCHHHHHHHHHHHHHHHHhcchhhhcCCCcccee
Confidence 9999999999997 7999999999884 33455554333222 11111 000110000 000110 1112
Q ss_pred eccccceeehhhhhcccchhhhhccchhHHHHHHhhCCcHHHHHHHHHhhcCCcCCCCCchhhhHHHHhHhhccccccCC
Q 007647 313 YQGTGTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGS 392 (595)
Q Consensus 313 ~~Gtg~~~rr~al~g~~~~~~~~~~~~~~~~~~~~~g~s~~f~~s~~~~~r~~~~~~~~~~~~~~~~~~~vg~c~ye~~~ 392 (595)
..|.+.++||+++ +++|
T Consensus 209 ~~G~~~lirr~~~-------------------------------------------------------~~vG-------- 225 (384)
T TIGR03469 209 AAGGCILIRREAL-------------------------------------------------------ERIG-------- 225 (384)
T ss_pred ecceEEEEEHHHH-------------------------------------------------------HHcC--------
Confidence 3456666666655 3566
Q ss_pred CcCccccCCC--CCccchHHHHHHHHhCCcEEEEeCCCCcceeccCCCCHHHHHHHHHHhh
Q 007647 393 SWGDEVGCLY--GATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWA 451 (595)
Q Consensus 393 ~w~~~~G~~~--~~itED~~t~~~l~~~Gwr~~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa 451 (595)
||++ ..+.||.+++.++.++|+++.+.... .......-++++++++|+.||.
T Consensus 226 ------Gf~~~~~~~~ED~~L~~r~~~~G~~v~~~~~~-~~~s~r~~~~~~~~~~~~~r~~ 279 (384)
T TIGR03469 226 ------GIAAIRGALIDDCTLAAAVKRSGGRIWLGLAA-RTRSLRPYDGLGEIWRMIARTA 279 (384)
T ss_pred ------CHHHHhhCcccHHHHHHHHHHcCCcEEEEecC-ceEEEEecCCHHHHHHHHHHhH
Confidence 6654 46889999999999999999998642 3333445679999999999994
No 32
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=99.94 E-value=9.7e-26 Score=226.89 Aligned_cols=220 Identities=16% Similarity=0.187 Sum_probs=158.2
Q ss_pred cCCCCCeEEEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhcccccC
Q 007647 89 IQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIR 168 (595)
Q Consensus 89 ~~~~P~V~V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~r 168 (595)
.+..|.|+|+||+|||+. .+.++|.++.+++||.++++|+|+|||++|.|.+.+++..+
T Consensus 25 ~~~~~~isVvip~~n~~~----~l~~~l~si~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~----------------- 83 (251)
T cd06439 25 PAYLPTVTIIIPAYNEEA----VIEAKLENLLALDYPRDRLEIIVVSDGSTDGTAEIAREYAD----------------- 83 (251)
T ss_pred CCCCCEEEEEEecCCcHH----HHHHHHHHHHhCcCCCCcEEEEEEECCCCccHHHHHHHHhh-----------------
Confidence 456789999999999764 89999999999999987799999999999998766543210
Q ss_pred CcccccCCCCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEE
Q 007647 169 APFRYFPDSEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFML 248 (595)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl 248 (595)
. ++.++..+ ++.||++|+|.+++ .+++|+|+
T Consensus 84 --------------------------------------~--~v~~i~~~-----~~~g~~~a~n~gi~----~a~~d~i~ 114 (251)
T cd06439 84 --------------------------------------K--GVKLLRFP-----ERRGKAAALNRALA----LATGEIVV 114 (251)
T ss_pred --------------------------------------C--cEEEEEcC-----CCCChHHHHHHHHH----HcCCCEEE
Confidence 0 24555443 34689999999999 68899999
Q ss_pred EEcCCCCCCchHHHHHHHhhhcCCCCCCcEEEEeCCccccCch--hh----hHhhHhhhhhhhcccCCc-eeccccceee
Q 007647 249 NVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYDRP--EN----LCILNEYIGKGIVGIQGP-FYQGTGTFHR 321 (595)
Q Consensus 249 ~~DAD~~~~~pd~L~~~v~~f~d~~~d~~vg~VQ~pq~f~d~~--~~----~~~f~~~~~~g~~~~~~~-~~~Gtg~~~r 321 (595)
++|+|+++ +|++|.+++..+ .++++++|++.....++- .. ...+...........+.. ...|++..+|
T Consensus 115 ~lD~D~~~-~~~~l~~l~~~~----~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r 189 (251)
T cd06439 115 FTDANALL-DPDALRLLVRHF----ADPSVGAVSGELVIVDGGGSGSGEGLYWKYENWLKRAESRLGSTVGANGAIYAIR 189 (251)
T ss_pred EEccccCc-CHHHHHHHHHHh----cCCCccEEEeEEEecCCcccchhHHHHHHHHHHHHHHHHhcCCeeeecchHHHhH
Confidence 99999997 699999999988 457788888755443211 00 000100000000000110 1112222233
Q ss_pred hhhhhcccchhhhhccchhHHHHHHhhCCcHHHHHHHHHhhcCCcCCCCCchhhhHHHHhHhhccccccCCCcCccccCC
Q 007647 322 RDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCL 401 (595)
Q Consensus 322 r~al~g~~~~~~~~~~~~~~~~~~~~~g~s~~f~~s~~~~~r~~~~~~~~~~~~~~~~~~~vg~c~ye~~~~w~~~~G~~ 401 (595)
|+++. |++
T Consensus 190 r~~~~------------------------------------------------------------------------~~~ 197 (251)
T cd06439 190 RELFR------------------------------------------------------------------------PLP 197 (251)
T ss_pred HHHhc------------------------------------------------------------------------CCC
Confidence 33220 456
Q ss_pred CCCccchHHHHHHHHhCCcEEEEeCCCCcceeccCCCCHHHHHHHHHHhhhhhHHH
Q 007647 402 YGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEI 457 (595)
Q Consensus 402 ~~~itED~~t~~~l~~~Gwr~~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G~~q~ 457 (595)
.....||++++.++..+||++.|.+ .+..+...|.+..++++|+.||+.|++|.
T Consensus 198 ~~~~~eD~~l~~~~~~~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~r~~~g~~~~ 251 (251)
T cd06439 198 ADTINDDFVLPLRIARQGYRVVYEP--DAVAYEEVAEDGSEEFRRRVRIAAGNLQA 251 (251)
T ss_pred cccchhHHHHHHHHHHcCCeEEecc--ccEEEEeCcccHHHHHHHHHHHHhccccC
Confidence 6677899999999999999999996 46789999999999999999999999873
No 33
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=99.93 E-value=9.6e-25 Score=217.02 Aligned_cols=224 Identities=16% Similarity=0.142 Sum_probs=157.1
Q ss_pred CeEEEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhcccccCCcccc
Q 007647 94 PVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRY 173 (595)
Q Consensus 94 ~V~V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~r~~~~~ 173 (595)
+|+|+||+|| |+++.+.+||+++.+++ | .+|+|+|||++|.|.+.+.+..
T Consensus 1 ~isVvIp~~n---e~~~~l~~~l~sl~~q~-~---~eiivvdd~s~d~~~~~l~~~~----------------------- 50 (235)
T cd06434 1 DVTVIIPVYD---EDPDVFRECLRSILRQK-P---LEIIVVTDGDDEPYLSILSQTV----------------------- 50 (235)
T ss_pred CeEEEEeecC---CChHHHHHHHHHHHhCC-C---CEEEEEeCCCChHHHHHHHhhc-----------------------
Confidence 5899999999 54459999999999998 4 5799999999998776653211
Q ss_pred cCCCCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEEcCC
Q 007647 174 FPDSEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCD 253 (595)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl~~DAD 253 (595)
..+.+.++. + +++||++|+|.|++ .+++|+|+++|+|
T Consensus 51 ---------------------------------~~~~~~v~~-~-----~~~g~~~a~n~g~~----~a~~d~v~~lD~D 87 (235)
T cd06434 51 ---------------------------------KYGGIFVIT-V-----PHPGKRRALAEGIR----HVTTDIVVLLDSD 87 (235)
T ss_pred ---------------------------------cCCcEEEEe-c-----CCCChHHHHHHHHH----HhCCCEEEEECCC
Confidence 113444443 2 34689999999999 6899999999999
Q ss_pred CCCCchHHHHHHHhhhcCCCCCCcEEEEeCCccccCc----hhh-hHhhHhh----hhhhhcccCCce-eccccceeehh
Q 007647 254 MYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYDR----PEN-LCILNEY----IGKGIVGIQGPF-YQGTGTFHRRD 323 (595)
Q Consensus 254 ~~~~~pd~L~~~v~~f~d~~~d~~vg~VQ~pq~f~d~----~~~-~~~f~~~----~~~g~~~~~~~~-~~Gtg~~~rr~ 323 (595)
.++ +|++|++++..| .+++++.|++.+...+. +.. ...++.. ........++.. ..|...++||+
T Consensus 88 ~~~-~~~~l~~l~~~~----~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~ 162 (235)
T cd06434 88 TVW-PPNALPEMLKPF----EDPKVGGVGTNQRILRPRDSKWSFLAAEYLERRNEEIRAAMSYDGGVPCLSGRTAAYRTE 162 (235)
T ss_pred cee-ChhHHHHHHHhc----cCCCEeEEcCceEeecCcccHHHHHHHHHHHHHHHHHHHHHhhCCCEEEccCcHHHHHHH
Confidence 997 799999999988 47899999987766522 111 1111111 111122222222 34666678888
Q ss_pred hhhcccchhhhhccchhHHHHHHhhCCcHHHHHHHHHhhcCCcCCCCCchhhhHHHHhHhhccccccCCCcCccccCCCC
Q 007647 324 VVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYG 403 (595)
Q Consensus 324 al~g~~~~~~~~~~~~~~~~~~~~~g~s~~f~~s~~~~~r~~~~~~~~~~~~~~~~~~~vg~c~ye~~~~w~~~~G~~~~ 403 (595)
++.....+ ..|. .+.+ +....
T Consensus 163 ~l~~~~~~--------------------~~~~-------------------------~~~~--------------~~~~~ 183 (235)
T cd06434 163 ILKDFLFL--------------------EEFT-------------------------NETF--------------MGRRL 183 (235)
T ss_pred HHhhhhhH--------------------HHhh-------------------------hhhh--------------cCCCC
Confidence 77311000 0000 0111 11224
Q ss_pred CccchHHHHHHHHhCCcEEEEeCCCCcceeccCCCCHHHHHHHHHHhhhhhHH
Q 007647 404 ATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLE 456 (595)
Q Consensus 404 ~itED~~t~~~l~~~Gwr~~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G~~q 456 (595)
...||.+++.+++++||+++|++ .+.++...|.+++++++||.||++|..+
T Consensus 184 ~~~eD~~l~~~~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~q~~Rw~~~~~~ 234 (235)
T cd06434 184 NAGDDRFLTRYVLSHGYKTVYQY--TSEAYTETPENYKKFLKQQLRWSRSNWR 234 (235)
T ss_pred CcCchHHHHHHHHHCCCeEEEec--CCeEEEEcchhHHHHHHHhhhhhhcccC
Confidence 67899999999999999999997 4567888999999999999999999853
No 34
>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.92 E-value=5.6e-22 Score=209.93 Aligned_cols=279 Identities=16% Similarity=0.199 Sum_probs=207.6
Q ss_pred CCeEEEEeccCCCCCChhHHHHHHHHHH---hcCCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhcccccCC
Q 007647 93 PPVDMFVTTADAELEPPIITVNTVLSLL---AVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRA 169 (595)
Q Consensus 93 P~V~V~IptynE~~Ep~~vv~~tl~s~l---~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~r~ 169 (595)
-.-.|++|+|| |++.-|-.-+++.. +-.--.+++.++|+.|..+++- .+.| .+.|..+|++.+-
T Consensus 144 hrTAilmPiyn---Ed~~rVfAgLrA~~eSla~Tg~~~~FD~FVLSDs~dpdi--alAE----q~a~~~l~~e~~g---- 210 (736)
T COG2943 144 HRTAILMPIYN---EDVNRVFAGLRATYESLAATGHAEHFDFFVLSDSRDPDI--ALAE----QKAWAELCRELGG---- 210 (736)
T ss_pred cceeEEeeccc---cCHHHHHHHHHHHHHHHHhhCCcccceEEEEcCCCCchh--hhhH----HHHHHHHHHHhCC----
Confidence 35789999999 77777766665543 3344556999999999998863 2333 3578889988862
Q ss_pred cccccCCCCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEE
Q 007647 170 PFRYFPDSEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLN 249 (595)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl~ 249 (595)
.-++-|-.|.+ |-+-||||+.+..+.-| +.++++++
T Consensus 211 --------------------------------------~~~ifYRrRr~----n~~RKaGNIaDfcrRwG--~~Y~~MlV 246 (736)
T COG2943 211 --------------------------------------EGNIFYRRRRR----NVKRKAGNIADFCRRWG--SAYSYMLV 246 (736)
T ss_pred --------------------------------------CCceeeehHhh----hhcccccCHHHHHHHhC--cccceEEE
Confidence 12455555544 56789999999999765 78999999
Q ss_pred EcCCCCCCchHHHHHHHhhhcCCCCCCcEEEEeCCcccc---Cchhh-----hHhhHhhhhhhhcccCCc--eeccccce
Q 007647 250 VDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFY---DRPEN-----LCILNEYIGKGIVGIQGP--FYQGTGTF 319 (595)
Q Consensus 250 ~DAD~~~~~pd~L~~~v~~f~d~~~d~~vg~VQ~pq~f~---d~~~~-----~~~f~~~~~~g~~~~~~~--~~~Gtg~~ 319 (595)
+|||+++ .+|.+-+++..|. .+|+.|.+|+--.-. ..|++ .+++=.....|+.-|++. -|.|.|++
T Consensus 247 LDADSvM-tgd~lvrLv~~ME---~~P~aGlIQt~P~~~gg~TL~AR~qQFatrvYGpl~~~GLawW~~~Es~yWGHNAI 322 (736)
T COG2943 247 LDADSVM-TGDCLVRLVRLME---ANPDAGLIQTSPKASGGDTLYARCQQFATRVYGPLFTAGLAWWQLGESHYWGHNAI 322 (736)
T ss_pred eeccccc-CchHHHHHHHHHh---hCCCCceeecchhhcCcchHHHHHHHHHHHHhchHHhhhhHHHhccccccccccce
Confidence 9999999 7999999999885 799999999743222 23333 345555667888888865 47899999
Q ss_pred eehhhhh---cccchhhhhccchhHHHHHHhhCCcHHHHHHHHHhhcCCcCCCCCchhhhHHHHhHhhccccccCCCcCc
Q 007647 320 HRRDVVY---GLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGD 396 (595)
Q Consensus 320 ~rr~al~---g~~~~~~~~~~~~~~~~~~~~~g~s~~f~~s~~~~~r~~~~~~~~~~~~~~~~~~~vg~c~ye~~~~w~~ 396 (595)
+|-+++. |+++ +.|.
T Consensus 323 IRt~aF~~hcgLp~-------------------------------LpG~------------------------------- 340 (736)
T COG2943 323 IRTKAFIEHCGLPP-------------------------------LPGR------------------------------- 340 (736)
T ss_pred eechhhHHhcCCCC-------------------------------CCCC-------------------------------
Confidence 9998873 1111 1111
Q ss_pred cccCCCCCccchHHHHHHHHhCCcEEEEeCCCCcceeccCCCCHHHHHHHHHHhhhhhHHHHHhhcchhhhhccCCCCHH
Q 007647 397 EVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFR 476 (595)
Q Consensus 397 ~~G~~~~~itED~~t~~~l~~~Gwr~~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G~~q~~~~~~~pl~~~~~~~l~~~ 476 (595)
..|....++.|+..+-.|.+.||.+--.+ +-.-.+++.|+|+-+++++-+|||+||+|.+. ++. .+++.+.
T Consensus 341 -~pFgG~ilSHDfvEAALmRRaGW~v~ia~-dL~GSyEE~PpnLlD~l~RDRRWC~GNLqh~r-----l~~--~~GlHwv 411 (736)
T COG2943 341 -GPFGGHILSHDFVEAALMRRAGWGVWIAY-DLDGSYEELPPNLLDELKRDRRWCHGNLQHFR-----LFL--VKGLHWV 411 (736)
T ss_pred -CCCCccccchHHHHHHHHhhcCceEEEec-cCCCchhhCCchHHHHHhhhhHhhhcchhhce-----eec--cCCccHH
Confidence 14666789999999999999999765443 34578999999999999999999999999873 343 3899999
Q ss_pred HHHHhHHhhhhhhhHHHHHHHHHHHHH
Q 007647 477 QCLAYLWILTWGLRSIPELCYIALPAY 503 (595)
Q Consensus 477 qrl~y~~~~~~~~~~~~~l~~~~~p~~ 503 (595)
.|+.++.....|+.+...++++++..+
T Consensus 412 sR~h~~tGVmsYlsaPlWfl~ll~g~a 438 (736)
T COG2943 412 SRAHFLTGVMSYLSAPLWFLFLLLGTA 438 (736)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 999999887777766555555544433
No 35
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=99.91 E-value=8.4e-23 Score=203.82 Aligned_cols=222 Identities=15% Similarity=0.109 Sum_probs=156.2
Q ss_pred CeEEEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhcccccCCcccc
Q 007647 94 PVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRY 173 (595)
Q Consensus 94 ~V~V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~r~~~~~ 173 (595)
+++|+||+||+++ .+.+++.++.+++||..+++|+|+|||++|.|.+.+++..+
T Consensus 1 ~~sIiip~~n~~~----~l~~~l~sl~~q~~~~~~~evivvd~~s~d~~~~~~~~~~~---------------------- 54 (249)
T cd02525 1 FVSIIIPVRNEEK----YIEELLESLLNQSYPKDLIEIIVVDGGSTDGTREIVQEYAA---------------------- 54 (249)
T ss_pred CEEEEEEcCCchh----hHHHHHHHHHhccCCCCccEEEEEeCCCCccHHHHHHHHHh----------------------
Confidence 4899999999654 88999999999999977899999999999988766544220
Q ss_pred cCCCCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEEcCC
Q 007647 174 FPDSEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCD 253 (595)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl~~DAD 253 (595)
..|.++++..+ .+++++|+|.|++ .+++|+++++|+|
T Consensus 55 ---------------------------------~~~~v~~i~~~------~~~~~~a~N~g~~----~a~~d~v~~lD~D 91 (249)
T cd02525 55 ---------------------------------KDPRIRLIDNP------KRIQSAGLNIGIR----NSRGDIIIRVDAH 91 (249)
T ss_pred ---------------------------------cCCeEEEEeCC------CCCchHHHHHHHH----HhCCCEEEEECCC
Confidence 12456777532 3578999999999 6899999999999
Q ss_pred CCCCchHHHHHHHhhhcCCCCCCcEEEEeCCcccc--Cchhh--hHhhH---hhhhhhhcccC---Cceeccccceeehh
Q 007647 254 MYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFY--DRPEN--LCILN---EYIGKGIVGIQ---GPFYQGTGTFHRRD 323 (595)
Q Consensus 254 ~~~~~pd~L~~~v~~f~d~~~d~~vg~VQ~pq~f~--d~~~~--~~~f~---~~~~~g~~~~~---~~~~~Gtg~~~rr~ 323 (595)
.++ +|++|.+++.++. ++++..|+++.... +.... ...+. ........... .....|.+.++||+
T Consensus 92 ~~~-~~~~l~~~~~~~~----~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (249)
T cd02525 92 AVY-PKDYILELVEALK----RTGADNVGGPMETIGESKFQKAIAVAQSSPLGSGGSAYRGGAVKIGYVDTVHHGAYRRE 166 (249)
T ss_pred ccC-CHHHHHHHHHHHh----cCCCCEEecceecCCCChHHHHHHHHhhchhccCCccccccccccccccccccceEEHH
Confidence 997 8999999998774 34555565443222 22111 00000 00000000000 11223334444444
Q ss_pred hhhcccchhhhhccchhHHHHHHhhCCcHHHHHHHHHhhcCCcCCCCCchhhhHHHHhHhhccccccCCCcCccccCCCC
Q 007647 324 VVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYG 403 (595)
Q Consensus 324 al~g~~~~~~~~~~~~~~~~~~~~~g~s~~f~~s~~~~~r~~~~~~~~~~~~~~~~~~~vg~c~ye~~~~w~~~~G~~~~ 403 (595)
++ +++| |+++.
T Consensus 167 ~~-------------------------------------------------------~~~g--------------~~~~~ 177 (249)
T cd02525 167 VF-------------------------------------------------------EKVG--------------GFDES 177 (249)
T ss_pred HH-------------------------------------------------------HHhC--------------CCCcc
Confidence 33 4555 55544
Q ss_pred -CccchHHHHHHHHhCCcEEEEeCCCCcceeccCCCCHHHHHHHHHHhhhhhHHHHHh
Q 007647 404 -ATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFS 460 (595)
Q Consensus 404 -~itED~~t~~~l~~~Gwr~~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G~~q~~~~ 460 (595)
...||.+++++++++|+++.|++ .+......|.+++++++|+.||+.|..|...+
T Consensus 178 ~~~~eD~~l~~r~~~~G~~~~~~~--~~~~~~~~~~s~~~~~~~~~r~~~~~~~~~~~ 233 (249)
T cd02525 178 LVRNEDAELNYRLRKAGYKIWLSP--DIRVYYYPRSTLKKLARQYFRYGKWRARTLRK 233 (249)
T ss_pred cCccchhHHHHHHHHcCcEEEEcC--CeEEEEcCCCCHHHHHHHHHHHhhhhHHHHHh
Confidence 44799999999999999999997 45677888999999999999999999999963
No 36
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine. N-acetyl-glucosamine transferase is responsible for the synthesis of bacteria Poly-beta-1,6-N-acetyl-D-glucosamine (PGA). Poly-beta-1,6-N-acetyl-D-glucosamine is a homopolymer that serves as an adhesion for the maintenance of biofilm structural stability in diverse eubacteria. N-acetyl-glucosamine transferase is the product of gene pgaC. Genetic analysis indicated that all four genes of the pgaABCD locus were required for the PGA production, pgaC being a glycosyltransferase.
Probab=99.87 E-value=1.5e-21 Score=189.74 Aligned_cols=159 Identities=18% Similarity=0.136 Sum_probs=118.4
Q ss_pred EEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhcccccCCcccccCC
Q 007647 97 MFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFPD 176 (595)
Q Consensus 97 V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~r~~~~~~~~ 176 (595)
|+||+|||++ ++.++|.++++++ | +++|+|+||||+|.|.+.++ ..
T Consensus 1 ViIp~~Ne~~----~l~~~l~sl~~~~-~--~~eIivvdd~S~D~t~~~~~-~~-------------------------- 46 (191)
T cd06436 1 VLVPCLNEEA----VIQRTLASLLRNK-P--NFLVLVIDDASDDDTAGIVR-LA-------------------------- 46 (191)
T ss_pred CEEeccccHH----HHHHHHHHHHhCC-C--CeEEEEEECCCCcCHHHHHh-he--------------------------
Confidence 6899999875 9999999999999 6 78999999999999876553 10
Q ss_pred CCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcC-------CCCCCCEEEE
Q 007647 177 SEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSG-------LMTNAPFMLN 249 (595)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~-------~~~~~d~vl~ 249 (595)
...++++++.++.. + .++||++|+|.|++.+. ...++|+|++
T Consensus 47 -----------------------------~~~~~v~~i~~~~~-~-~~~Gk~~aln~g~~~~~~~~~~~g~~~~~d~v~~ 95 (191)
T cd06436 47 -----------------------------ITDSRVHLLRRHLP-N-ARTGKGDALNAAYDQIRQILIEEGADPERVIIAV 95 (191)
T ss_pred -----------------------------ecCCcEEEEeccCC-c-CCCCHHHHHHHHHHHHhhhccccccCCCccEEEE
Confidence 01246777765421 1 34689999999998521 0123589999
Q ss_pred EcCCCCCCchHHHHHHHhhhcCCCCCCcEEEEeCCccccCchhh---------hHhhHhhhhhhhcccCCceecccccee
Q 007647 250 VDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYDRPEN---------LCILNEYIGKGIVGIQGPFYQGTGTFH 320 (595)
Q Consensus 250 ~DAD~~~~~pd~L~~~v~~f~d~~~d~~vg~VQ~pq~f~d~~~~---------~~~f~~~~~~g~~~~~~~~~~Gtg~~~ 320 (595)
+|||.++ +|++|++++.+| .++++++||++..+++.-.+ ...++..++.++...+...+.|+|+++
T Consensus 96 ~DaD~~~-~~~~l~~~~~~~----~~~~v~~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~G~~~~~ 170 (191)
T cd06436 96 IDADGRL-DPNALEAVAPYF----SDPRVAGTQSRVRMYNRHKNLLTILQDLEFFIIIAATQSLRALTGTVGLGGNGQFM 170 (191)
T ss_pred ECCCCCc-CHhHHHHHHHhh----cCCceEEEeeeEEEecCCCCHHHHHHHHHHHHHHHHHHHHHHhcCcEEECCeeEEE
Confidence 9999997 799999988777 57899999998876632211 122234556777666665678999999
Q ss_pred ehhhh
Q 007647 321 RRDVV 325 (595)
Q Consensus 321 rr~al 325 (595)
||++|
T Consensus 171 r~~~l 175 (191)
T cd06436 171 RLSAL 175 (191)
T ss_pred eHHHH
Confidence 99988
No 37
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis. The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.
Probab=99.83 E-value=1.6e-20 Score=180.83 Aligned_cols=156 Identities=18% Similarity=0.165 Sum_probs=108.6
Q ss_pred EEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhcccccCCcccccCC
Q 007647 97 MFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFPD 176 (595)
Q Consensus 97 V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~r~~~~~~~~ 176 (595)
|+||+|||++ .+.++|.++++++||.++++|+|+||||+|.|.+.+++ ++.
T Consensus 1 VvIp~~ne~~----~i~~~l~sl~~~~~p~~~~eiivvdd~s~D~t~~~~~~--------------~~~----------- 51 (183)
T cd06438 1 ILIPAHNEEA----VIGNTVRSLKAQDYPRELYRIFVVADNCTDDTAQVARA--------------AGA----------- 51 (183)
T ss_pred CEEeccchHH----HHHHHHHHHHhcCCCCcccEEEEEeCCCCchHHHHHHH--------------cCC-----------
Confidence 6899999764 99999999999999988899999999999988755432 110
Q ss_pred CCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcC-CCCCCCEEEEEcCCCC
Q 007647 177 SEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSG-LMTNAPFMLNVDCDMY 255 (595)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~-~~~~~d~vl~~DAD~~ 255 (595)
. ++.+.+ .+++||++|+|.+++... ..+++|+++++|||++
T Consensus 52 ---------------------------------~--~~~~~~---~~~~gk~~aln~g~~~a~~~~~~~d~v~~~DaD~~ 93 (183)
T cd06438 52 ---------------------------------T--VLERHD---PERRGKGYALDFGFRHLLNLADDPDAVVVFDADNL 93 (183)
T ss_pred ---------------------------------e--EEEeCC---CCCCCHHHHHHHHHHHHHhcCCCCCEEEEEcCCCC
Confidence 1 222221 135689999999998531 1246999999999999
Q ss_pred CCchHHHHHHHhhhcCCCCCCcEEEEeCCccccC---c-hhh-----hHhhHhhhhhhhcccCCc-eeccccceeehhhh
Q 007647 256 ANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYD---R-PEN-----LCILNEYIGKGIVGIQGP-FYQGTGTFHRRDVV 325 (595)
Q Consensus 256 ~~~pd~L~~~v~~f~d~~~d~~vg~VQ~pq~f~d---~-~~~-----~~~f~~~~~~g~~~~~~~-~~~Gtg~~~rr~al 325 (595)
+ +|++|.+++..|. .++ ..||+.....+ . +.. ...++.....+...+++. .+.|+|.++||+++
T Consensus 94 ~-~p~~l~~l~~~~~---~~~--~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l 167 (183)
T cd06438 94 V-DPNALEELNARFA---AGA--RVVQAYYNSKNPDDSWITRLYAFAFLVFNRLRPLGRSNLGLSCQLGGTGMCFPWAVL 167 (183)
T ss_pred C-ChhHHHHHHHHHh---hCC--CeeEEEEeeeCCccCHHHHHHHHHHHHHHHHHHHHHHHcCCCeeecCchhhhHHHHH
Confidence 7 7999999999885 233 45665443331 1 111 222333444455556654 35788888888877
No 38
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.83 E-value=1.3e-19 Score=175.70 Aligned_cols=122 Identities=16% Similarity=0.197 Sum_probs=95.7
Q ss_pred CCeEEEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhcccccCCccc
Q 007647 93 PPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFR 172 (595)
Q Consensus 93 P~V~V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~r~~~~ 172 (595)
|.|+|+||+|||+ .+.+.+||.|+++++|| .++|+|+|||++|.|.+.+.+...
T Consensus 1 p~vsiii~~~n~~---~~~l~~~l~sl~~q~~~--~~eiivvd~gs~d~~~~~~~~~~~--------------------- 54 (202)
T cd04184 1 PLISIVMPVYNTP---EKYLREAIESVRAQTYP--NWELCIADDASTDPEVKRVLKKYA--------------------- 54 (202)
T ss_pred CeEEEEEecccCc---HHHHHHHHHHHHhCcCC--CeEEEEEeCCCCChHHHHHHHHHH---------------------
Confidence 6899999999965 34899999999999999 689999999999976544432110
Q ss_pred ccCCCCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEEcC
Q 007647 173 YFPDSEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDC 252 (595)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl~~DA 252 (595)
...+++.++..+ .+.|++.|+|.|++ .+++||++++|+
T Consensus 55 ---------------------------------~~~~~~~~~~~~-----~~~g~~~a~n~g~~----~a~~d~i~~ld~ 92 (202)
T cd04184 55 ---------------------------------AQDPRIKVVFRE-----ENGGISAATNSALE----LATGEFVALLDH 92 (202)
T ss_pred ---------------------------------hcCCCEEEEEcc-----cCCCHHHHHHHHHH----hhcCCEEEEECC
Confidence 012355666544 34689999999999 688999999999
Q ss_pred CCCCCchHHHHHHHhhhcCCCCCCcEEEEeCCcc
Q 007647 253 DMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQY 286 (595)
Q Consensus 253 D~~~~~pd~L~~~v~~f~d~~~d~~vg~VQ~pq~ 286 (595)
|.++ +|++|.+++..|. .++++++|.+...
T Consensus 93 D~~~-~~~~l~~~~~~~~---~~~~~~~v~~~~~ 122 (202)
T cd04184 93 DDEL-APHALYEVVKALN---EHPDADLIYSDED 122 (202)
T ss_pred CCcC-ChHHHHHHHHHHH---hCCCCCEEEccHH
Confidence 9997 8999999998873 4677788865443
No 39
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.79 E-value=1.6e-18 Score=168.20 Aligned_cols=118 Identities=15% Similarity=0.139 Sum_probs=92.7
Q ss_pred EEEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCC-CcchHHHHHHHHHhhhhhhhhhhhcccccCCccccc
Q 007647 96 DMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDAC-SPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 174 (595)
Q Consensus 96 ~V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~-~d~T~~~l~e~~~~a~~w~p~c~~~gv~~r~~~~~~ 174 (595)
+|+||+||+ |+++.+.+||.|+++++|| ..+|+|+|||+ +|.|.+.+.+.. +
T Consensus 1 sviip~~n~--~~~~~l~~~l~Sl~~q~~~--~~eiiivdd~ss~d~t~~~~~~~~----------~------------- 53 (201)
T cd04195 1 SVLMSVYIK--EKPEFLREALESILKQTLP--PDEVVLVKDGPVTQSLNEVLEEFK----------R------------- 53 (201)
T ss_pred CEEEEcccc--chHHHHHHHHHHHHhcCCC--CcEEEEEECCCCchhHHHHHHHHH----------h-------------
Confidence 589999996 3467899999999999999 56899999998 554543332211 0
Q ss_pred CCCCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEEcCCC
Q 007647 175 PDSEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDM 254 (595)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl~~DAD~ 254 (595)
..| +.++..++ +.|+++|+|.|++ .++||+|+++|+|.
T Consensus 54 --------------------------------~~~-i~~i~~~~-----n~G~~~a~N~g~~----~a~gd~i~~lD~Dd 91 (201)
T cd04195 54 --------------------------------KLP-LKVVPLEK-----NRGLGKALNEGLK----HCTYDWVARMDTDD 91 (201)
T ss_pred --------------------------------cCC-eEEEEcCc-----cccHHHHHHHHHH----hcCCCEEEEeCCcc
Confidence 123 66776653 3689999999999 68999999999999
Q ss_pred CCCchHHHHHHHhhhcCCCCCCcEEEEeCCcc
Q 007647 255 YANNPEIVLQAMCLHLGSKNENEFAFIQSPQY 286 (595)
Q Consensus 255 ~~~~pd~L~~~v~~f~d~~~d~~vg~VQ~pq~ 286 (595)
++ .|++|.+++..|. .++++++|.+...
T Consensus 92 ~~-~~~~l~~~~~~~~---~~~~~~~~~~~~~ 119 (201)
T cd04195 92 IS-LPDRFEKQLDFIE---KNPEIDIVGGGVL 119 (201)
T ss_pred cc-CcHHHHHHHHHHH---hCCCeEEEcccEE
Confidence 97 7999999999885 5778888876543
No 40
>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2
Probab=99.76 E-value=1e-17 Score=162.30 Aligned_cols=133 Identities=22% Similarity=0.305 Sum_probs=102.3
Q ss_pred EEEEEcCCCCCCchHHHHHHHhhhcCCCCCCcEEEEeCCcccc---Cchhh-hHhhHhh----hhhhhcccCC-ceeccc
Q 007647 246 FMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFY---DRPEN-LCILNEY----IGKGIVGIQG-PFYQGT 316 (595)
Q Consensus 246 ~vl~~DAD~~~~~pd~L~~~v~~f~d~~~d~~vg~VQ~pq~f~---d~~~~-~~~f~~~----~~~g~~~~~~-~~~~Gt 316 (595)
+|+++|||+.+ +||+|++++.+| .+|++++||+|..+. +...+ +...+.. .....+..+. ....|+
T Consensus 1 ~v~~~DaDt~~-~~d~l~~~~~~~----~~~~~~~vq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 75 (193)
T PF13632_consen 1 YVLFLDADTRL-PPDFLERLVAAL----EDPKVDAVQGPIIFRNRGSLLTRLQDFEYAISHGLSRLSQSSLGRPLFLSGS 75 (193)
T ss_pred CEEEEcCCCCC-ChHHHHHHHHHH----hCCCceEEEccEEecCCCChhheeehhhhhhhhhhhHHHHHhcCCCccccCc
Confidence 58999999997 799999999988 468999999998876 12222 2222211 1112222333 234688
Q ss_pred cceeehhhhhcccchhhhhccchhHHHHHHhhCCcHHHHHHHHHhhcCCcCCCCCchhhhHHHHhHhhccccccCCCcCc
Q 007647 317 GTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGD 396 (595)
Q Consensus 317 g~~~rr~al~g~~~~~~~~~~~~~~~~~~~~~g~s~~f~~s~~~~~r~~~~~~~~~~~~~~~~~~~vg~c~ye~~~~w~~ 396 (595)
|.++|++++ ++||
T Consensus 76 ~~~~r~~~l-------------------------------------------------------~~vg------------ 88 (193)
T PF13632_consen 76 GMLFRREAL-------------------------------------------------------REVG------------ 88 (193)
T ss_pred ceeeeHHHH-------------------------------------------------------HHhC------------
Confidence 888887776 3566
Q ss_pred cccCC-CCCccchHHHHHHHHhCCcEEEEeCCCCcceeccCCCCHHHHHHHHHHhhhhh
Q 007647 397 EVGCL-YGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGL 454 (595)
Q Consensus 397 ~~G~~-~~~itED~~t~~~l~~~Gwr~~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G~ 454 (595)
||+ ..+++||+++++++.++||++.|++ ++.+++++|+|+.++++||+||..|.
T Consensus 89 --~~~~~~~~~ED~~l~~~l~~~G~~~~~~~--~~~~~~~~p~t~~~~~~Qr~RW~~g~ 143 (193)
T PF13632_consen 89 --GFDDPFSIGEDMDLGFRLRRAGYRIVYVP--DAIVYTEAPPTFRAFIRQRRRWARGA 143 (193)
T ss_pred --cccccccccchHHHHHHHHHCCCEEEEec--ccceeeeCCCCHHHHHHHHHHHHhhh
Confidence 788 8899999999999999999999997 35679999999999999999999997
No 41
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.76 E-value=1.9e-17 Score=161.28 Aligned_cols=118 Identities=16% Similarity=0.160 Sum_probs=94.9
Q ss_pred EEEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhcccccCCcccccC
Q 007647 96 DMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFP 175 (595)
Q Consensus 96 ~V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~r~~~~~~~ 175 (595)
+|+||+||+++ .+.++|.|+++++|| +++|+|+||||+|.|.+.+++.++
T Consensus 1 sIvIp~yn~~~----~l~~~l~sl~~q~~~--~~eiiVvddgS~d~t~~~~~~~~~------------------------ 50 (214)
T cd04196 1 AVLMATYNGEK----YLREQLDSILAQTYK--NDELIISDDGSTDGTVEIIKEYID------------------------ 50 (214)
T ss_pred CEEEEecCcHH----HHHHHHHHHHhCcCC--CeEEEEEeCCCCCCcHHHHHHHHh------------------------
Confidence 58999999765 899999999999999 799999999999999876654321
Q ss_pred CCCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCC-cEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEEcCCC
Q 007647 176 DSEPSDSSSGELLQDWKNMKVISENKGGLSDEIP-HLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDM 254 (595)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p-~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl~~DAD~ 254 (595)
.+| .++++..+ ..+|+++|+|.++. .+++|+|+++|+|.
T Consensus 51 -------------------------------~~~~~~~~~~~~-----~~~G~~~~~n~g~~----~~~g~~v~~ld~Dd 90 (214)
T cd04196 51 -------------------------------KDPFIIILIRNG-----KNLGVARNFESLLQ----AADGDYVFFCDQDD 90 (214)
T ss_pred -------------------------------cCCceEEEEeCC-----CCccHHHHHHHHHH----hCCCCEEEEECCCc
Confidence 112 33444433 45799999999999 78999999999999
Q ss_pred CCCchHHHHHHHhhhcCCCCCCcEEEEeCCccc
Q 007647 255 YANNPEIVLQAMCLHLGSKNENEFAFIQSPQYF 287 (595)
Q Consensus 255 ~~~~pd~L~~~v~~f~d~~~d~~vg~VQ~pq~f 287 (595)
++ .|+.|.+++..+. .+++.+++.+....
T Consensus 91 ~~-~~~~l~~~~~~~~---~~~~~~~~~~~~~~ 119 (214)
T cd04196 91 IW-LPDKLERLLKAFL---KDDKPLLVYSDLEL 119 (214)
T ss_pred cc-ChhHHHHHHHHHh---cCCCceEEecCcEE
Confidence 97 7999999998864 56777777766543
No 42
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans. UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.
Probab=99.75 E-value=9.1e-17 Score=167.02 Aligned_cols=109 Identities=12% Similarity=0.047 Sum_probs=89.0
Q ss_pred EEEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhcccccCCcccccC
Q 007647 96 DMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFP 175 (595)
Q Consensus 96 ~V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~r~~~~~~~ 175 (595)
+|+||+|||+ ++.+.+||.|++++++|....||+|+||||+|.|.+.+.+...
T Consensus 1 SIIIp~~N~~---~~~l~~~l~Sl~~~~~~~~~~EIIvVDd~S~d~t~~~~~~~~~------------------------ 53 (299)
T cd02510 1 SVIIIFHNEA---LSTLLRTVHSVINRTPPELLKEIILVDDFSDKPELKLLLEEYY------------------------ 53 (299)
T ss_pred CEEEEEecCc---HHHHHHHHHHHHhcCchhcCCEEEEEECCCCchHHHHHHHHHH------------------------
Confidence 5899999954 4599999999999999865679999999999998866543100
Q ss_pred CCCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEEcCCCC
Q 007647 176 DSEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMY 255 (595)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl~~DAD~~ 255 (595)
....|+++++..+ .+.|++.|.|.|++ .++||+|+++|+|++
T Consensus 54 -----------------------------~~~~~~v~vi~~~-----~n~G~~~a~N~g~~----~A~gd~i~fLD~D~~ 95 (299)
T cd02510 54 -----------------------------KKYLPKVKVLRLK-----KREGLIRARIAGAR----AATGDVLVFLDSHCE 95 (299)
T ss_pred -----------------------------hhcCCcEEEEEcC-----CCCCHHHHHHHHHH----HccCCEEEEEeCCcc
Confidence 0023577888655 34689999999999 689999999999999
Q ss_pred CCchHHHHHHHhhhc
Q 007647 256 ANNPEIVLQAMCLHL 270 (595)
Q Consensus 256 ~~~pd~L~~~v~~f~ 270 (595)
+ +|++|.+++..+.
T Consensus 96 ~-~~~wL~~ll~~l~ 109 (299)
T cd02510 96 V-NVGWLEPLLARIA 109 (299)
T ss_pred c-CccHHHHHHHHHH
Confidence 7 7999999999885
No 43
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.75 E-value=1.8e-17 Score=159.16 Aligned_cols=114 Identities=16% Similarity=0.168 Sum_probs=89.2
Q ss_pred EEEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhcccccCCcccccC
Q 007647 96 DMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFP 175 (595)
Q Consensus 96 ~V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~r~~~~~~~ 175 (595)
+|+||+||+++ .+.+++.++.+++|| .++|+|+||||+|.|.+.+.+..+
T Consensus 1 sivi~~~n~~~----~l~~~l~sl~~q~~~--~~evivvDd~s~d~~~~~~~~~~~------------------------ 50 (202)
T cd06433 1 SIITPTYNQAE----TLEETIDSVLSQTYP--NIEYIVIDGGSTDGTVDIIKKYED------------------------ 50 (202)
T ss_pred CEEEeccchHH----HHHHHHHHHHhCCCC--CceEEEEeCCCCccHHHHHHHhHh------------------------
Confidence 58999999654 999999999999999 589999999999998766543210
Q ss_pred CCCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEEcCCCC
Q 007647 176 DSEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMY 255 (595)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl~~DAD~~ 255 (595)
.+.++..+ +..|+++|+|.|++ .+++|+|+++|+|.+
T Consensus 51 ----------------------------------~~~~~~~~-----~~~g~~~a~n~~~~----~a~~~~v~~ld~D~~ 87 (202)
T cd06433 51 ----------------------------------KITYWISE-----PDKGIYDAMNKGIA----LATGDIIGFLNSDDT 87 (202)
T ss_pred ----------------------------------hcEEEEec-----CCcCHHHHHHHHHH----HcCCCEEEEeCCCcc
Confidence 11233333 34689999999999 689999999999999
Q ss_pred CCchHHHHHHHhhhcCCCCCCcEEEEeCCcc
Q 007647 256 ANNPEIVLQAMCLHLGSKNENEFAFIQSPQY 286 (595)
Q Consensus 256 ~~~pd~L~~~v~~f~d~~~d~~vg~VQ~pq~ 286 (595)
+ .|+.+.+++..+. .+++.++|.+...
T Consensus 88 ~-~~~~~~~~~~~~~---~~~~~~~v~g~~~ 114 (202)
T cd06433 88 L-LPGALLAVVAAFA---EHPEVDVVYGDVL 114 (202)
T ss_pred c-CchHHHHHHHHHH---hCCCccEEEeeeE
Confidence 7 7999999985554 4567777766543
No 44
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase
Probab=99.75 E-value=7.5e-17 Score=162.56 Aligned_cols=124 Identities=14% Similarity=0.099 Sum_probs=91.5
Q ss_pred CCCCCeEEEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhcccccCC
Q 007647 90 QELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRA 169 (595)
Q Consensus 90 ~~~P~V~V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~r~ 169 (595)
...|.|+|+||+|||++ .+..++.++.+...+...++|+|+||||+|.|.+.+++.+ ++++
T Consensus 6 ~~~~~vsVvIp~yne~~----~l~~~l~~l~~~~~~~~~~eiivvDdgS~D~t~~i~~~~~----------~~~~----- 66 (243)
T PLN02726 6 EGAMKYSIIVPTYNERL----NIALIVYLIFKALQDVKDFEIIVVDDGSPDGTQDVVKQLQ----------KVYG----- 66 (243)
T ss_pred CCCceEEEEEccCCchh----hHHHHHHHHHHHhccCCCeEEEEEeCCCCCCHHHHHHHHH----------HhcC-----
Confidence 34689999999999875 6777777775432222278999999999999987765432 1111
Q ss_pred cccccCCCCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEE
Q 007647 170 PFRYFPDSEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLN 249 (595)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl~ 249 (595)
.+++.++.++ .+.||++|+|.|++ .+++|++++
T Consensus 67 --------------------------------------~~~v~~~~~~-----~n~G~~~a~n~g~~----~a~g~~i~~ 99 (243)
T PLN02726 67 --------------------------------------EDRILLRPRP-----GKLGLGTAYIHGLK----HASGDFVVI 99 (243)
T ss_pred --------------------------------------CCcEEEEecC-----CCCCHHHHHHHHHH----HcCCCEEEE
Confidence 1245555543 34689999999999 689999999
Q ss_pred EcCCCCCCchHHHHHHHhhhcCCCCCCcEEEEeCC
Q 007647 250 VDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSP 284 (595)
Q Consensus 250 ~DAD~~~~~pd~L~~~v~~f~d~~~d~~vg~VQ~p 284 (595)
+|+|..+ +|++|.+++..+. +++.++|.+.
T Consensus 100 lD~D~~~-~~~~l~~l~~~~~----~~~~~~v~g~ 129 (243)
T PLN02726 100 MDADLSH-HPKYLPSFIKKQR----ETGADIVTGT 129 (243)
T ss_pred EcCCCCC-CHHHHHHHHHHHH----hcCCcEEEEc
Confidence 9999997 8999999998874 3345555543
No 45
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function. Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.72 E-value=2.1e-16 Score=155.40 Aligned_cols=98 Identities=15% Similarity=0.086 Sum_probs=79.7
Q ss_pred eEEEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhcccccCCccccc
Q 007647 95 VDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 174 (595)
Q Consensus 95 V~V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~r~~~~~~ 174 (595)
|+|+||+||+++ .+.++|.++++++|+ +.+|+|+||+++|.|.+.+++
T Consensus 1 vsvii~~~n~~~----~l~~~l~sl~~q~~~--~~evivvdd~s~d~~~~~~~~-------------------------- 48 (221)
T cd02522 1 LSIIIPTLNEAE----NLPRLLASLRRLNPL--PLEIIVVDGGSTDGTVAIARS-------------------------- 48 (221)
T ss_pred CEEEEEccCcHH----HHHHHHHHHHhccCC--CcEEEEEeCCCCccHHHHHhc--------------------------
Confidence 689999999653 799999999999996 789999999999987644321
Q ss_pred CCCCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEEcCCC
Q 007647 175 PDSEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDM 254 (595)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl~~DAD~ 254 (595)
++++++.. ..||++|+|.|++ .+++|+|+++|+|.
T Consensus 49 ----------------------------------~~~~~~~~-------~~g~~~a~n~g~~----~a~~~~i~~~D~D~ 83 (221)
T cd02522 49 ----------------------------------AGVVVISS-------PKGRARQMNAGAA----AARGDWLLFLHADT 83 (221)
T ss_pred ----------------------------------CCeEEEeC-------CcCHHHHHHHHHH----hccCCEEEEEcCCC
Confidence 13344432 2479999999999 68899999999999
Q ss_pred CCCchHHHHHHHhhhc
Q 007647 255 YANNPEIVLQAMCLHL 270 (595)
Q Consensus 255 ~~~~pd~L~~~v~~f~ 270 (595)
.+ +|+++.+++..+.
T Consensus 84 ~~-~~~~l~~l~~~~~ 98 (221)
T cd02522 84 RL-PPDWDAAIIETLR 98 (221)
T ss_pred CC-ChhHHHHHHHHhh
Confidence 97 7999999876653
No 46
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,
Probab=99.71 E-value=3.9e-16 Score=153.76 Aligned_cols=104 Identities=17% Similarity=0.112 Sum_probs=84.4
Q ss_pred EEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhcccccCCcccccCC
Q 007647 97 MFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFPD 176 (595)
Q Consensus 97 V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~r~~~~~~~~ 176 (595)
|+||+|||++ .+.++|.++.++.|+ ..++|+|+||||+|.|.+.+++..+
T Consensus 1 ViIp~yn~~~----~l~~~l~sl~~q~~~-~~~eiiiVDd~S~d~t~~~~~~~~~------------------------- 50 (224)
T cd06442 1 IIIPTYNERE----NIPELIERLDAALKG-IDYEIIVVDDNSPDGTAEIVRELAK------------------------- 50 (224)
T ss_pred CeEeccchhh----hHHHHHHHHHHhhcC-CCeEEEEEeCCCCCChHHHHHHHHH-------------------------
Confidence 6899999765 899999999999982 3799999999999998765543210
Q ss_pred CCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEEcCCCCC
Q 007647 177 SEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYA 256 (595)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl~~DAD~~~ 256 (595)
..|++.++..+ .+.||++|+|.|++ .+.+|+|+++|+|..+
T Consensus 51 ------------------------------~~~~i~~~~~~-----~n~G~~~a~n~g~~----~a~gd~i~~lD~D~~~ 91 (224)
T cd06442 51 ------------------------------EYPRVRLIVRP-----GKRGLGSAYIEGFK----AARGDVIVVMDADLSH 91 (224)
T ss_pred ------------------------------hCCceEEEecC-----CCCChHHHHHHHHH----HcCCCEEEEEECCCCC
Confidence 12455566554 35689999999999 6899999999999997
Q ss_pred CchHHHHHHHhhhc
Q 007647 257 NNPEIVLQAMCLHL 270 (595)
Q Consensus 257 ~~pd~L~~~v~~f~ 270 (595)
+|++|.+++..+.
T Consensus 92 -~~~~l~~l~~~~~ 104 (224)
T cd06442 92 -PPEYIPELLEAQL 104 (224)
T ss_pred -CHHHHHHHHHHHh
Confidence 7999999999874
No 47
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine . This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.
Probab=99.71 E-value=2.9e-16 Score=155.19 Aligned_cols=110 Identities=15% Similarity=0.106 Sum_probs=86.2
Q ss_pred EEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhcccccCCcccccCC
Q 007647 97 MFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFPD 176 (595)
Q Consensus 97 V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~r~~~~~~~~ 176 (595)
|+||+||+++ .+.++|.|+++++|| +.++|+|+||||+|.|.+.+++.+ +++
T Consensus 1 ViIp~yn~~~----~l~~~l~sl~~q~~~-~~~eiiVvDd~S~d~t~~i~~~~~----------~~~------------- 52 (219)
T cd06913 1 IILPVHNGEQ----WLDECLESVLQQDFE-GTLELSVFNDASTDKSAEIIEKWR----------KKL------------- 52 (219)
T ss_pred CEEeecCcHH----HHHHHHHHHHhCCCC-CCEEEEEEeCCCCccHHHHHHHHH----------HhC-------------
Confidence 6899999775 999999999999998 469999999999999986665421 111
Q ss_pred CCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEEcCCCCC
Q 007647 177 SEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYA 256 (595)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl~~DAD~~~ 256 (595)
..++++++..+.+.+ ...|.+.|+|.|++ .++||+++++|+|..+
T Consensus 53 ------------------------------~~~~~~~~~~~~~~~-~~~G~~~a~N~g~~----~a~gd~i~~lD~D~~~ 97 (219)
T cd06913 53 ------------------------------EDSGVIVLVGSHNSP-SPKGVGYAKNQAIA----QSSGRYLCFLDSDDVM 97 (219)
T ss_pred ------------------------------cccCeEEEEecccCC-CCccHHHHHHHHHH----hcCCCEEEEECCCccC
Confidence 113455655443211 34689999999999 6899999999999997
Q ss_pred CchHHHHHHHhhhc
Q 007647 257 NNPEIVLQAMCLHL 270 (595)
Q Consensus 257 ~~pd~L~~~v~~f~ 270 (595)
+|+.+.+.+..+.
T Consensus 98 -~~~~l~~~~~~~~ 110 (219)
T cd06913 98 -MPQRIRLQYEAAL 110 (219)
T ss_pred -ChhHHHHHHHHHH
Confidence 7999998887774
No 48
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.70 E-value=3e-16 Score=146.01 Aligned_cols=156 Identities=20% Similarity=0.184 Sum_probs=122.3
Q ss_pred EEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhcccccCCcccccCC
Q 007647 97 MFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFPD 176 (595)
Q Consensus 97 V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~r~~~~~~~~ 176 (595)
|+||+||+. +.+.+++.++.+++|| ..+|+|+|||+++.|.+.+.+..
T Consensus 1 vii~~~~~~----~~l~~~l~sl~~~~~~--~~~iiivdd~s~~~~~~~~~~~~-------------------------- 48 (166)
T cd04186 1 IIIVNYNSL----EYLKACLDSLLAQTYP--DFEVIVVDNASTDGSVELLRELF-------------------------- 48 (166)
T ss_pred CEEEecCCH----HHHHHHHHHHHhccCC--CeEEEEEECCCCchHHHHHHHhC--------------------------
Confidence 689999953 4999999999999996 77999999999998775553310
Q ss_pred CCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEEcCCCCC
Q 007647 177 SEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYA 256 (595)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl~~DAD~~~ 256 (595)
+++.++..+ .+.|+++|+|.+++ .+++|+++++|+|.++
T Consensus 49 --------------------------------~~~~~~~~~-----~~~g~~~a~n~~~~----~~~~~~i~~~D~D~~~ 87 (166)
T cd04186 49 --------------------------------PEVRLIRNG-----ENLGFGAGNNQGIR----EAKGDYVLLLNPDTVV 87 (166)
T ss_pred --------------------------------CCeEEEecC-----CCcChHHHhhHHHh----hCCCCEEEEECCCcEE
Confidence 134555543 34689999999999 6799999999999997
Q ss_pred CchHHHHHHHhhhcCCCCCCcEEEEeCCccccCchhhhHhhHhhhhhhhcccCCceeccccceeehhhhhcccchhhhhc
Q 007647 257 NNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYDRPENLCILNEYIGKGIVGIQGPFYQGTGTFHRRDVVYGLCLDQIEHQ 336 (595)
Q Consensus 257 ~~pd~L~~~v~~f~d~~~d~~vg~VQ~pq~f~d~~~~~~~f~~~~~~g~~~~~~~~~~Gtg~~~rr~al~g~~~~~~~~~ 336 (595)
.|+++.+++..+. .+++++++.+. .+|++.++||+++.
T Consensus 88 -~~~~l~~~~~~~~---~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~---------- 125 (166)
T cd04186 88 -EPGALLELLDAAE---QDPDVGIVGPK----------------------------VSGAFLLVRREVFE---------- 125 (166)
T ss_pred -CccHHHHHHHHHH---hCCCceEEEcc----------------------------CceeeEeeeHHHHH----------
Confidence 7999999998765 56788877521 46777788887662
Q ss_pred cchhHHHHHHhhCCcHHHHHHHHHhhcCCcCCCCCchhhhHHHHhHhhccccccCCCcCccccCCCCC--ccchHHHHHH
Q 007647 337 GNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGA--TAEDNLTGLV 414 (595)
Q Consensus 337 ~~~~~~~~~~~~g~s~~f~~s~~~~~r~~~~~~~~~~~~~~~~~~~vg~c~ye~~~~w~~~~G~~~~~--itED~~t~~~ 414 (595)
++| ||+... ..||.+++++
T Consensus 126 ---------------------------------------------~~~--------------~~~~~~~~~~eD~~~~~~ 146 (166)
T cd04186 126 ---------------------------------------------EVG--------------GFDEDFFLYYEDVDLCLR 146 (166)
T ss_pred ---------------------------------------------HcC--------------CCChhhhccccHHHHHHH
Confidence 333 455432 4599999999
Q ss_pred HHhCCcEEEEeC
Q 007647 415 IHSKGWRSGYCL 426 (595)
Q Consensus 415 l~~~Gwr~~y~~ 426 (595)
+..+||++.+++
T Consensus 147 ~~~~g~~i~~~~ 158 (166)
T cd04186 147 ARLAGYRVLYVP 158 (166)
T ss_pred HHHcCCeEEEcc
Confidence 999999999986
No 49
>PRK10073 putative glycosyl transferase; Provisional
Probab=99.70 E-value=3.5e-16 Score=165.32 Aligned_cols=116 Identities=15% Similarity=0.152 Sum_probs=94.4
Q ss_pred CCCeEEEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhcccccCCcc
Q 007647 92 LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPF 171 (595)
Q Consensus 92 ~P~V~V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~r~~~ 171 (595)
.|.|+|+||+||+++ .+.++|.|+++++|+ .+||+|+||||+|.|.+.+.+.++
T Consensus 5 ~p~vSVIIP~yN~~~----~L~~~l~Sl~~Qt~~--~~EIIiVdDgStD~t~~i~~~~~~-------------------- 58 (328)
T PRK10073 5 TPKLSIIIPLYNAGK----DFRAFMESLIAQTWT--ALEIIIVNDGSTDNSVEIAKHYAE-------------------- 58 (328)
T ss_pred CCeEEEEEeccCCHH----HHHHHHHHHHhCCCC--CeEEEEEeCCCCccHHHHHHHHHh--------------------
Confidence 488999999999764 999999999999998 799999999999998866644220
Q ss_pred cccCCCCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEEc
Q 007647 172 RYFPDSEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVD 251 (595)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl~~D 251 (595)
..|++++++. ++.|.++|.|.|++ .++||||+++|
T Consensus 59 -----------------------------------~~~~i~vi~~------~n~G~~~arN~gl~----~a~g~yi~flD 93 (328)
T PRK10073 59 -----------------------------------NYPHVRLLHQ------ANAGVSVARNTGLA----VATGKYVAFPD 93 (328)
T ss_pred -----------------------------------hCCCEEEEEC------CCCChHHHHHHHHH----hCCCCEEEEEC
Confidence 2356777753 24689999999999 79999999999
Q ss_pred CCCCCCchHHHHHHHhhhcCCCCCCcEEEE
Q 007647 252 CDMYANNPEIVLQAMCLHLGSKNENEFAFI 281 (595)
Q Consensus 252 AD~~~~~pd~L~~~v~~f~d~~~d~~vg~V 281 (595)
+|..+ .|+.+.+++..+.+ .+.+++..
T Consensus 94 ~DD~~-~p~~l~~l~~~~~~--~~~dvv~~ 120 (328)
T PRK10073 94 ADDVV-YPTMYETLMTMALE--DDLDVAQC 120 (328)
T ss_pred CCCcc-ChhHHHHHHHHHHh--CCCCEEEE
Confidence 99998 79999999987642 23455443
No 50
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase. Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm
Probab=99.69 E-value=1.1e-15 Score=145.69 Aligned_cols=104 Identities=15% Similarity=0.188 Sum_probs=80.9
Q ss_pred EEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhcccccCCcccccCC
Q 007647 97 MFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFPD 176 (595)
Q Consensus 97 V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~r~~~~~~~~ 176 (595)
|+||+||++. .+.+||.++.+++|+ ..+|+|+||||+|.|.+.+.+..+ +.
T Consensus 1 ivip~~n~~~----~l~~~l~sl~~q~~~--~~eiivvdd~s~d~t~~~~~~~~~----------~~------------- 51 (182)
T cd06420 1 LIITTYNRPE----ALELVLKSVLNQSIL--PFEVIIADDGSTEETKELIEEFKS----------QF------------- 51 (182)
T ss_pred CEEeecCChH----HHHHHHHHHHhccCC--CCEEEEEeCCCchhHHHHHHHHHh----------hc-------------
Confidence 6899999553 899999999999998 679999999999988766544211 00
Q ss_pred CCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEEcCCCCC
Q 007647 177 SEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYA 256 (595)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl~~DAD~~~ 256 (595)
.. ++.++.+++ +..+|++|+|.+++ .+++|+|+++|+|.++
T Consensus 52 ------------------------------~~-~~~~~~~~~----~~~~~~~~~n~g~~----~a~g~~i~~lD~D~~~ 92 (182)
T cd06420 52 ------------------------------PI-PIKHVWQED----EGFRKAKIRNKAIA----AAKGDYLIFIDGDCIP 92 (182)
T ss_pred ------------------------------CC-ceEEEEcCC----cchhHHHHHHHHHH----HhcCCEEEEEcCCccc
Confidence 00 233343331 23479999999999 7899999999999997
Q ss_pred CchHHHHHHHhhh
Q 007647 257 NNPEIVLQAMCLH 269 (595)
Q Consensus 257 ~~pd~L~~~v~~f 269 (595)
.|++|.+++..+
T Consensus 93 -~~~~l~~~~~~~ 104 (182)
T cd06420 93 -HPDFIADHIELA 104 (182)
T ss_pred -CHHHHHHHHHHh
Confidence 799999999876
No 51
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.68 E-value=1.1e-15 Score=148.67 Aligned_cols=113 Identities=17% Similarity=0.132 Sum_probs=88.4
Q ss_pred EEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhcccccCCcccccCC
Q 007647 97 MFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFPD 176 (595)
Q Consensus 97 V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~r~~~~~~~~ 176 (595)
|+|||||+++ .+.++|.|+++++|| ..+|+|+||||+|.|.+.+.+..+
T Consensus 1 viI~~~n~~~----~l~~~l~sl~~q~~~--~~eiiivD~~s~d~t~~~~~~~~~------------------------- 49 (202)
T cd04185 1 AVVVTYNRLD----LLKECLDALLAQTRP--PDHIIVIDNASTDGTAEWLTSLGD------------------------- 49 (202)
T ss_pred CEEEeeCCHH----HHHHHHHHHHhccCC--CceEEEEECCCCcchHHHHHHhcC-------------------------
Confidence 6899999765 899999999999999 568999999999998766543210
Q ss_pred CCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEEcCCCCC
Q 007647 177 SEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYA 256 (595)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl~~DAD~~~ 256 (595)
.. ++.++.-++ ..|++.++|.+++..- .+++|+++++|+|.++
T Consensus 50 ------------------------------~~-~i~~~~~~~-----n~g~~~~~n~~~~~a~-~~~~d~v~~ld~D~~~ 92 (202)
T cd04185 50 ------------------------------LD-NIVYLRLPE-----NLGGAGGFYEGVRRAY-ELGYDWIWLMDDDAIP 92 (202)
T ss_pred ------------------------------CC-ceEEEECcc-----ccchhhHHHHHHHHHh-ccCCCEEEEeCCCCCc
Confidence 11 255665443 4578999999988532 4589999999999997
Q ss_pred CchHHHHHHHhhhcCCCCCCcEEEEe
Q 007647 257 NNPEIVLQAMCLHLGSKNENEFAFIQ 282 (595)
Q Consensus 257 ~~pd~L~~~v~~f~d~~~d~~vg~VQ 282 (595)
+|+++.+++..+ .+++++++.
T Consensus 93 -~~~~l~~l~~~~----~~~~~~~~~ 113 (202)
T cd04185 93 -DPDALEKLLAYA----DKDNPQFLA 113 (202)
T ss_pred -ChHHHHHHHHHH----hcCCceEec
Confidence 799999999887 356777764
No 52
>PRK10018 putative glycosyl transferase; Provisional
Probab=99.64 E-value=5.9e-15 Score=152.47 Aligned_cols=117 Identities=15% Similarity=0.276 Sum_probs=90.8
Q ss_pred CCCCeEEEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhcccccCCc
Q 007647 91 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAP 170 (595)
Q Consensus 91 ~~P~V~V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~r~~ 170 (595)
..|.|+|+||+||+++ .+.++|.|+++++|| .+||+|+||||++ .+.+.+.. +++
T Consensus 3 ~~p~VSVIip~yN~~~----~l~~~l~Svl~Qt~~--~~EiIVVDDgS~~--~~~~~~~~----------~~~------- 57 (279)
T PRK10018 3 DNPLISIYMPTWNRQQ----LAIRAIKSVLRQDYS--NWEMIIVDDCSTS--WEQLQQYV----------TAL------- 57 (279)
T ss_pred CCCEEEEEEEeCCCHH----HHHHHHHHHHhCCCC--CeEEEEEECCCCC--HHHHHHHH----------HHc-------
Confidence 3589999999999765 789999999999999 7999999999984 32332221 111
Q ss_pred ccccCCCCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEE
Q 007647 171 FRYFPDSEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNV 250 (595)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl~~ 250 (595)
..|+++++..+ .+.|++.|+|.|++ .++||||+++
T Consensus 58 ------------------------------------~~~ri~~i~~~-----~n~G~~~a~N~gi~----~a~g~~I~~l 92 (279)
T PRK10018 58 ------------------------------------NDPRITYIHND-----INSGACAVRNQAIM----LAQGEYITGI 92 (279)
T ss_pred ------------------------------------CCCCEEEEECC-----CCCCHHHHHHHHHH----HcCCCEEEEE
Confidence 12567888654 35789999999999 7999999999
Q ss_pred cCCCCCCchHHHHHHHhhhcCCCCCCcEEEE
Q 007647 251 DCDMYANNPEIVLQAMCLHLGSKNENEFAFI 281 (595)
Q Consensus 251 DAD~~~~~pd~L~~~v~~f~d~~~d~~vg~V 281 (595)
|+|... .|+.|.+++.++. ..+..+++
T Consensus 93 DaDD~~-~p~~l~~~~~~~~---~~~~~~~~ 119 (279)
T PRK10018 93 DDDDEW-TPNRLSVFLAHKQ---QLVTHAFL 119 (279)
T ss_pred CCCCCC-CccHHHHHHHHHH---hCCCccEE
Confidence 999998 7999999988763 23444544
No 53
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase. Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.
Probab=99.64 E-value=2.4e-15 Score=149.62 Aligned_cols=112 Identities=16% Similarity=0.129 Sum_probs=79.6
Q ss_pred EEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhcccccCCcccccCC
Q 007647 97 MFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFPD 176 (595)
Q Consensus 97 V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~r~~~~~~~~ 176 (595)
++||+|||+ .+.+.+||.+++++ ..+|+|+||+++|.+.... + .
T Consensus 1 ~vI~~yn~~---~~~l~~~l~sl~~q-----~~~iivvDn~s~~~~~~~~-~--------------~------------- 44 (237)
T cd02526 1 AVVVTYNPD---LSKLKELLAALAEQ-----VDKVVVVDNSSGNDIELRL-R--------------L------------- 44 (237)
T ss_pred CEEEEecCC---HHHHHHHHHHHhcc-----CCEEEEEeCCCCccHHHHh-h--------------c-------------
Confidence 479999954 34999999999987 2469999999888543211 0 0
Q ss_pred CCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEEcCCCCC
Q 007647 177 SEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYA 256 (595)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl~~DAD~~~ 256 (595)
..+++.++..++ +.|+++|+|.|++.+. ..++|+++++|+|..+
T Consensus 45 ------------------------------~~~~i~~i~~~~-----n~G~~~a~N~g~~~a~-~~~~d~v~~lD~D~~~ 88 (237)
T cd02526 45 ------------------------------NSEKIELIHLGE-----NLGIAKALNIGIKAAL-ENGADYVLLFDQDSVP 88 (237)
T ss_pred ------------------------------cCCcEEEEECCC-----ceehHHhhhHHHHHHH-hCCCCEEEEECCCCCc
Confidence 013567776653 4679999999999421 0145999999999997
Q ss_pred CchHHHHHHH---hhhcCCCCCCcEEEEeCCc
Q 007647 257 NNPEIVLQAM---CLHLGSKNENEFAFIQSPQ 285 (595)
Q Consensus 257 ~~pd~L~~~v---~~f~d~~~d~~vg~VQ~pq 285 (595)
+|++|.+++ ..+. .+++++.++ |+
T Consensus 89 -~~~~l~~l~~~~~~~~---~~~~~~~~~-~~ 115 (237)
T cd02526 89 -PPDMVEKLLAYKILSD---KNSNIGAVG-PR 115 (237)
T ss_pred -CHhHHHHHHHHHHhhc---cCCCeEEEe-ee
Confidence 799999985 3222 467777664 44
No 54
>PRK10063 putative glycosyl transferase; Provisional
Probab=99.63 E-value=9.6e-15 Score=148.44 Aligned_cols=101 Identities=17% Similarity=0.045 Sum_probs=77.9
Q ss_pred CCeEEEEeccCCCCCChhHHHHHHHHHHhcC-CCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhcccccCCcc
Q 007647 93 PPVDMFVTTADAELEPPIITVNTVLSLLAVD-YPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPF 171 (595)
Q Consensus 93 P~V~V~IptynE~~Ep~~vv~~tl~s~l~ld-YP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~r~~~ 171 (595)
|.|+|+||+||+++ .+.+||+++.++. .+...+||+|+||||+|.|.+.+++..
T Consensus 1 ~~vSVIi~~yN~~~----~l~~~l~sl~~~~~~~~~~~EiIVvDdgStD~t~~i~~~~~--------------------- 55 (248)
T PRK10063 1 MLLSVITVAFRNLE----GIVKTHASLRHLAQDPGISFEWIVVDGGSNDGTREFLENLN--------------------- 55 (248)
T ss_pred CeEEEEEEeCCCHH----HHHHHHHHHHHHHhCCCCCEEEEEEECcCcccHHHHHHHhc---------------------
Confidence 67999999999875 8999999998642 222389999999999999986654311
Q ss_pred cccCCCCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEEc
Q 007647 172 RYFPDSEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVD 251 (595)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl~~D 251 (595)
+. .++++++. +.+|+++|+|.|++ .++||+|+++|
T Consensus 56 ----------------------------------~~-~~i~~i~~------~~~G~~~A~N~Gi~----~a~g~~v~~ld 90 (248)
T PRK10063 56 ----------------------------------GI-FNLRFVSE------PDNGIYDAMNKGIA----MAQGRFALFLN 90 (248)
T ss_pred ----------------------------------cc-CCEEEEEC------CCCCHHHHHHHHHH----HcCCCEEEEEe
Confidence 00 13566653 23489999999999 68999999999
Q ss_pred CCCCCCchHHHHH
Q 007647 252 CDMYANNPEIVLQ 264 (595)
Q Consensus 252 AD~~~~~pd~L~~ 264 (595)
+|... .|+.++.
T Consensus 91 ~DD~~-~~~~~~~ 102 (248)
T PRK10063 91 SGDIF-HQDAANF 102 (248)
T ss_pred CCccc-CcCHHHH
Confidence 99997 7887654
No 55
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=99.63 E-value=1.8e-15 Score=140.11 Aligned_cols=116 Identities=24% Similarity=0.335 Sum_probs=90.5
Q ss_pred EEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhcccccCCcccccCC
Q 007647 97 MFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFPD 176 (595)
Q Consensus 97 V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~r~~~~~~~~ 176 (595)
|+||+||++ +.+.+||.+++++.|+ ..+|+|+|||++|.|.+.+.+... +
T Consensus 1 Viip~~n~~----~~l~~~l~sl~~q~~~--~~~iivvdd~s~d~t~~~~~~~~~----------~-------------- 50 (180)
T cd06423 1 IIVPAYNEE----AVIERTIESLLALDYP--KLEVIVVDDGSTDDTLEILEELAA----------L-------------- 50 (180)
T ss_pred CeecccChH----HHHHHHHHHHHhCCCC--ceEEEEEeCCCccchHHHHHHHhc----------c--------------
Confidence 689999965 3999999999999997 789999999999988765543210 0
Q ss_pred CCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEEcCCCCC
Q 007647 177 SEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYA 256 (595)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl~~DAD~~~ 256 (595)
..+.+.++..+ +..||+.|+|.+++ .+++|+++++|+|..+
T Consensus 51 ------------------------------~~~~~~~~~~~-----~~~g~~~~~n~~~~----~~~~~~i~~~D~D~~~ 91 (180)
T cd06423 51 ------------------------------YIRRVLVVRDK-----ENGGKAGALNAGLR----HAKGDIVVVLDADTIL 91 (180)
T ss_pred ------------------------------ccceEEEEEec-----ccCCchHHHHHHHH----hcCCCEEEEECCCCCc
Confidence 00234455444 35689999999999 6799999999999997
Q ss_pred CchHHHHHHHhhhcCCCCCCcEEEEeCCc
Q 007647 257 NNPEIVLQAMCLHLGSKNENEFAFIQSPQ 285 (595)
Q Consensus 257 ~~pd~L~~~v~~f~d~~~d~~vg~VQ~pq 285 (595)
.|++|.+++..+. .++++++|....
T Consensus 92 -~~~~l~~~~~~~~---~~~~~~~v~~~~ 116 (180)
T cd06423 92 -EPDALKRLVVPFF---ADPKVGAVQGRV 116 (180)
T ss_pred -ChHHHHHHHHHhc---cCCCeeeEeeeE
Confidence 7999999966664 568888886544
No 56
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation. UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.
Probab=99.63 E-value=8.1e-15 Score=144.01 Aligned_cols=105 Identities=15% Similarity=0.080 Sum_probs=83.2
Q ss_pred EEEeccCCCCCChhHHHHHHHHHHhcCC--CCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhcccccCCccccc
Q 007647 97 MFVTTADAELEPPIITVNTVLSLLAVDY--PVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 174 (595)
Q Consensus 97 V~IptynE~~Ep~~vv~~tl~s~l~ldY--P~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~r~~~~~~ 174 (595)
|+||+|||+. .+.++|.+++++.+ +...++|+|+||||+|.|.+.+++.. ++
T Consensus 1 iiip~yN~~~----~l~~~l~~l~~~~~~~~~~~~eiivvdd~S~D~t~~~~~~~~----------~~------------ 54 (211)
T cd04188 1 VVIPAYNEEK----RLPPTLEEAVEYLEERPSFSYEIIVVDDGSKDGTAEVARKLA----------RK------------ 54 (211)
T ss_pred CEEcccChHH----HHHHHHHHHHHHHhccCCCCEEEEEEeCCCCCchHHHHHHHH----------Hh------------
Confidence 6899999875 89999999998765 33478999999999999886665422 11
Q ss_pred CCCCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCc-EEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEEcCC
Q 007647 175 PDSEPSDSSSGELLQDWKNMKVISENKGGLSDEIPH-LVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCD 253 (595)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~-l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl~~DAD 253 (595)
+|. ++++..++ ..||++|+|.|++ .+++|+|+++|+|
T Consensus 55 ---------------------------------~~~~i~~i~~~~-----n~G~~~a~~~g~~----~a~gd~i~~ld~D 92 (211)
T cd04188 55 ---------------------------------NPALIRVLTLPK-----NRGKGGAVRAGML----AARGDYILFADAD 92 (211)
T ss_pred ---------------------------------CCCcEEEEEccc-----CCCcHHHHHHHHH----HhcCCEEEEEeCC
Confidence 122 35555442 3589999999999 6899999999999
Q ss_pred CCCCchHHHHHHHhhhc
Q 007647 254 MYANNPEIVLQAMCLHL 270 (595)
Q Consensus 254 ~~~~~pd~L~~~v~~f~ 270 (595)
... +|+.+.+++..+.
T Consensus 93 ~~~-~~~~l~~l~~~~~ 108 (211)
T cd04188 93 LAT-PFEELEKLEEALK 108 (211)
T ss_pred CCC-CHHHHHHHHHHHh
Confidence 997 7999999998864
No 57
>PF13506 Glyco_transf_21: Glycosyl transferase family 21
Probab=99.60 E-value=8.6e-15 Score=141.15 Aligned_cols=150 Identities=14% Similarity=0.127 Sum_probs=109.5
Q ss_pred CCCChHHHHHHHHHhcCCC-CCCCEEEEEcCCCCCCchHHHHHHHhhhcCCCCCCcEEEEeCCcccc--Cchhh--hHhh
Q 007647 223 PHHYKAGAMNVLTRVSGLM-TNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFY--DRPEN--LCIL 297 (595)
Q Consensus 223 ~~~~KAgaLN~~l~~~~~~-~~~d~vl~~DAD~~~~~pd~L~~~v~~f~d~~~d~~vg~VQ~pq~f~--d~~~~--~~~f 297 (595)
..+.|..||..+++ . +++|++++.|+|..+ +||+|++++..| .+|++|.|.++.... +.+.. ...+
T Consensus 14 g~N~Kv~nL~~~~~----~~a~~d~~~~~DsDi~v-~p~~L~~lv~~l----~~p~vglVt~~~~~~~~~~~~~~l~~~~ 84 (175)
T PF13506_consen 14 GCNPKVNNLAQGLE----AGAKYDYLVISDSDIRV-PPDYLRELVAPL----ADPGVGLVTGLPRGVPARGFWSRLEAAF 84 (175)
T ss_pred CCChHHHHHHHHHH----hhCCCCEEEEECCCeeE-CHHHHHHHHHHH----hCCCCcEEEecccccCCcCHHHHHHHHH
Confidence 34689999999999 5 899999999999998 799999999999 468999998765544 22222 1122
Q ss_pred Hhhhhhhhc-ccCCceeccccceeehhhhhcccchhhhhccchhHHHHHHhhCCcHHHHHHHHHhhcCCcCCCCCchhhh
Q 007647 298 NEYIGKGIV-GIQGPFYQGTGTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRS 376 (595)
Q Consensus 298 ~~~~~~g~~-~~~~~~~~Gtg~~~rr~al~g~~~~~~~~~~~~~~~~~~~~~g~s~~f~~s~~~~~r~~~~~~~~~~~~~ 376 (595)
+.....-.. ..+..+..|..+.+||++|.
T Consensus 85 ~~~~~~~~~a~~~~~~~~G~~m~~rr~~L~-------------------------------------------------- 114 (175)
T PF13506_consen 85 FNFLPGVLQALGGAPFAWGGSMAFRREALE-------------------------------------------------- 114 (175)
T ss_pred HhHHHHHHHHhcCCCceecceeeeEHHHHH--------------------------------------------------
Confidence 211110000 12345667888888888772
Q ss_pred HHHHhHhhccccccCCCcCccccCCC--CCccchHHHHHHHHhCCcEEEEeCCCCcceeccCC----CCHHHHHHHHHHh
Q 007647 377 LDEAHRVADCGYEYGSSWGDEVGCLY--GATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCAS----PSGPAGMRQQKRW 450 (595)
Q Consensus 377 ~~~~~~vg~c~ye~~~~w~~~~G~~~--~~itED~~t~~~l~~~Gwr~~y~~~~~~~~~g~aP----~tl~~~~~Qr~RW 450 (595)
++| |+.. +.++||+.++-+++.+|||++..+ .+......| .+++++++++.||
T Consensus 115 -----~~G--------------G~~~l~~~ladD~~l~~~~~~~G~~v~~~~--~~v~~~~~~~~~~~s~~~~~~r~~RW 173 (175)
T PF13506_consen 115 -----EIG--------------GFEALADYLADDYALGRRLRARGYRVVLSP--YPVVQTSVPRTLEDSFRDFFRRQLRW 173 (175)
T ss_pred -----Hcc--------------cHHHHhhhhhHHHHHHHHHHHCCCeEEEcc--hheeecccCccccccHHHHHHHHHhh
Confidence 333 3332 589999999999999999999986 345556666 4899999999999
Q ss_pred hh
Q 007647 451 AT 452 (595)
Q Consensus 451 a~ 452 (595)
++
T Consensus 174 ~r 175 (175)
T PF13506_consen 174 AR 175 (175)
T ss_pred cC
Confidence 85
No 58
>PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2.4.1.16 from EC), also known as chitin-UDP acetyl-glucosaminyl transferase, is a plasma membrane-bound protein which catalyses the conversion of UDP-N-acettyl-D-glucosamine and {(1,4)-(N-acetyl- beta-D-glucosaminyl)}(N) to UDP and {(1,4)-(N-acetyl-beta-D- glucosaminyl)}(N+1). It plays a major role in cell wall biogenesis. ; GO: 0016758 transferase activity, transferring hexosyl groups
Probab=99.59 E-value=1e-12 Score=144.96 Aligned_cols=297 Identities=15% Similarity=0.152 Sum_probs=163.4
Q ss_pred CCCCCeEEEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCC------CCcchHHHHHHHHHhhhhhhhhhhhc
Q 007647 90 QELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDA------CSPLNFYSLVEASKFAKLWVPFCKKY 163 (595)
Q Consensus 90 ~~~P~V~V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg------~~d~T~~~l~e~~~~a~~w~p~c~~~ 163 (595)
...+.+=.+||||| |..+.++.||.|+..+|||.++--++|+-|| .+..|.+.+.+... .+
T Consensus 22 ~~~~~~i~~v~cy~---E~~~~l~~tldsl~~~~y~~~~k~~~vi~DG~i~g~g~~~~tp~~~l~~~~----------~~ 88 (527)
T PF03142_consen 22 FPDKFVICLVPCYS---EGEEELRTTLDSLATTDYDDSRKLIFVICDGMIKGSGNDKTTPEIVLDILG----------DF 88 (527)
T ss_pred CCCceEEEEEcccc---CChHHHHHHHHHHHhcCCCCcccEEEEEcCcEEecCCCCCChHHHHHHhhc----------cc
Confidence 34567778999999 5556999999999999999875557777775 34446655544321 01
Q ss_pred ccccCC--cccccCCCCCCCCCchhhHHHHhhhHHH---hhcCC------CCCCCCCcEEEEE-------eccCCCCCCC
Q 007647 164 NVQIRA--PFRYFPDSEPSDSSSGELLQDWKNMKVI---SENKG------GLSDEIPHLVYIS-------REKRPKHPHH 225 (595)
Q Consensus 164 gv~~r~--~~~~~~~~~~~~~~~~~~~~~~~~~kv~---~~~~~------~~~~~~p~l~yi~-------R~kr~~~~~~ 225 (595)
-..... |..|.+-++ .. +.+.--||- ++..+ +..++.|-++.+- .+++| .++
T Consensus 89 ~~~~~~~~~~~~~~~~~-g~-------~~~n~~~vy~g~y~~~~~~~~~~~~~~~vp~~~vvk~g~~~e~~~~k~--~Nr 158 (527)
T PF03142_consen 89 VDPPEDPEPLSYVSLGE-GS-------KQHNMAKVYSGFYEYDGDSHVPPEKQQRVPYIVVVKCGTPSERSSPKP--GNR 158 (527)
T ss_pred CCCcCCCCCcceEEecc-Cc-------hhhcCEEEEEEEEecCCccccccccccccCEEEEEEcCChHHhccccc--ccC
Confidence 011111 112322110 00 000000000 00000 0012356555554 11123 345
Q ss_pred ChHHHHHHHHH------------------------hcCCC-CCCCEEEEEcCCCCCCchHHHHHHHhhhcCCCCCCcEEE
Q 007647 226 YKAGAMNVLTR------------------------VSGLM-TNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAF 280 (595)
Q Consensus 226 ~KAgaLN~~l~------------------------~~~~~-~~~d~vl~~DAD~~~~~pd~L~~~v~~f~d~~~d~~vg~ 280 (595)
||-..+=-.++ ..|+. ...||++.+|||+.+ +|+++.+++..+. .|++++.
T Consensus 159 GKRDsq~~~~~fl~~~~~~~~~~~~~~e~~~~i~~~~g~~~~~~~~il~~DaDt~~-~p~~~~~lv~~m~---~d~~i~g 234 (527)
T PF03142_consen 159 GKRDSQILLMSFLNKVHFNNPMTPLELELFHQIWNIIGVDPDFYEYILMVDADTKF-DPDSVNRLVDAME---RDPKIGG 234 (527)
T ss_pred CchHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHhccCccceEEEEEecCCceE-cHHHHHHHHHHHc---CCCCeEE
Confidence 66554322221 11222 346999999999998 8999999998886 7899999
Q ss_pred EeCCccccC-------chhhhHhhH-hhhhhhhcccCCceec--cccceeehhhhhcccchhhhhccchhHHHHHHhhCC
Q 007647 281 IQSPQYFYD-------RPENLCILN-EYIGKGIVGIQGPFYQ--GTGTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGN 350 (595)
Q Consensus 281 VQ~pq~f~d-------~~~~~~~f~-~~~~~g~~~~~~~~~~--Gtg~~~rr~al~g~~~~~~~~~~~~~~~~~~~~~g~ 350 (595)
|.+.-...+ -++..+++. ...++...+.-|.+.| |.=+++|-+|+.+..... ... ....+....+
T Consensus 235 vCG~t~i~n~~~s~~t~~Q~fEY~ish~l~Ka~Es~fG~VtCLPGcfsmyR~~a~~~~~~~~-~p~--l~~~~i~~~Y-- 309 (527)
T PF03142_consen 235 VCGETRIDNKGQSWWTMYQVFEYAISHHLQKAFESVFGSVTCLPGCFSMYRISALMDGDGYW-VPL--LISPDIIEKY-- 309 (527)
T ss_pred EeceeEEcCCCCCHhhheeccchhHHHHHHHHHHHHhCceeecCCcceeeeeehhccccccc-ccc--ccchHHHHHH--
Confidence 987533331 122222221 2234444455555544 555568888874310000 000 0000000000
Q ss_pred cHHHHHHHHHhhcCCcCCCCCchhhhHHHHhHhhccccccCCCcCccccCCCCCccchHHHHHHHHhC--CcEEEEeCCC
Q 007647 351 SKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSK--GWRSGYCLPI 428 (595)
Q Consensus 351 s~~f~~s~~~~~r~~~~~~~~~~~~~~~~~~~vg~c~ye~~~~w~~~~G~~~~~itED~~t~~~l~~~--Gwr~~y~~~~ 428 (595)
.. ...+.+.+. .-..+.||-.++-.|.++ |||..|++
T Consensus 310 ------------~~----------~~~dtlh~~-----------------nl~~lGEDR~LttLlLk~~~~~k~~y~~-- 348 (527)
T PF03142_consen 310 ------------SE----------NPVDTLHQK-----------------NLLDLGEDRWLTTLLLKQFPGYKTEYVP-- 348 (527)
T ss_pred ------------hh----------ccchHHHHH-----------------hhhhcchhHHHHHHHHhhCCCceEEEcc--
Confidence 00 000111110 012467999999878877 89999997
Q ss_pred CcceeccCCCCHHHHHHHHHHhhhhhHHHHH
Q 007647 429 PHAFLGCASPSGPAGMRQQKRWATGLLEILF 459 (595)
Q Consensus 429 ~~~~~g~aP~tl~~~~~Qr~RWa~G~~q~~~ 459 (595)
.+.+++.+|++++.+++||+||..|.+-.++
T Consensus 349 ~A~a~T~aP~t~~vflsQRRRWinSTi~Nl~ 379 (527)
T PF03142_consen 349 SAVAYTDAPETFSVFLSQRRRWINSTIHNLF 379 (527)
T ss_pred cccccccCCccHHHHHHHhhhccchhHhhHh
Confidence 5788999999999999999999999986654
No 59
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=99.59 E-value=5.7e-15 Score=136.68 Aligned_cols=157 Identities=20% Similarity=0.156 Sum_probs=109.6
Q ss_pred EEEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhcccccCCcccccC
Q 007647 96 DMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFP 175 (595)
Q Consensus 96 ~V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~r~~~~~~~ 175 (595)
||+||+||+++ .+.+++.+++.+.++ ..+|+|+|||++|.|.+.+++..+
T Consensus 1 Svvip~~n~~~----~l~~~l~sl~~q~~~--~~eiivvdd~s~d~~~~~~~~~~~------------------------ 50 (169)
T PF00535_consen 1 SVVIPTYNEAE----YLERTLESLLKQTDP--DFEIIVVDDGSTDETEEILEEYAE------------------------ 50 (169)
T ss_dssp EEEEEESS-TT----THHHHHHHHHHHSGC--EEEEEEEECS-SSSHHHHHHHHHC------------------------
T ss_pred CEEEEeeCCHH----HHHHHHHHHhhccCC--CEEEEEeccccccccccccccccc------------------------
Confidence 69999999754 899999999999777 889999999999998876655320
Q ss_pred CCCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEEcCCCC
Q 007647 176 DSEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMY 255 (595)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl~~DAD~~ 255 (595)
..++++|+.+++ ..|+++|+|.|++ .+++||++++|+|.+
T Consensus 51 -------------------------------~~~~i~~i~~~~-----n~g~~~~~n~~~~----~a~~~~i~~ld~D~~ 90 (169)
T PF00535_consen 51 -------------------------------SDPNIRYIRNPE-----NLGFSAARNRGIK----HAKGEYILFLDDDDI 90 (169)
T ss_dssp -------------------------------CSTTEEEEEHCC-----CSHHHHHHHHHHH----H--SSEEEEEETTEE
T ss_pred -------------------------------cccccccccccc-----ccccccccccccc----ccceeEEEEeCCCce
Confidence 124788998864 3489999999999 689999999999999
Q ss_pred CCchHHHHHHHhhhcCCCCCCcEEEEeCCccccC-chhh--h-----HhhHhhhhhhhcccCCceeccccceeehhhh
Q 007647 256 ANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYD-RPEN--L-----CILNEYIGKGIVGIQGPFYQGTGTFHRRDVV 325 (595)
Q Consensus 256 ~~~pd~L~~~v~~f~d~~~d~~vg~VQ~pq~f~d-~~~~--~-----~~f~~~~~~g~~~~~~~~~~Gtg~~~rr~al 325 (595)
+ .|++|.+++..+.+ .++++..........+ .... . ...+..............++|+++++||+++
T Consensus 91 ~-~~~~l~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~ 165 (169)
T PF00535_consen 91 I-SPDWLEELVEALEK--NPPDVVIGSVIYIDDDNRYPDRRLRFSFWNRFERKIFNNIRFWKISFFIGSCALFRRSVF 165 (169)
T ss_dssp E--TTHHHHHHHHHHH--CTTEEEEEEEEEEECTTETEECCCTSEEEECCHCHHHHTTHSTTSSEESSSCEEEEEHHH
T ss_pred E-cHHHHHHHHHHHHh--CCCcEEEEEEEEecCCccccccccchhhhhhhhhHHHHhhhcCCcccccccEEEEEHHHH
Confidence 7 79999999999863 1333333322211111 0000 0 1222233344445566778999999999988
No 60
>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional
Probab=99.59 E-value=2.9e-13 Score=143.45 Aligned_cols=128 Identities=11% Similarity=0.077 Sum_probs=93.8
Q ss_pred CCCCCeEEEEeccCCCCCChhHHHHHHHHHHhc------CCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhc
Q 007647 90 QELPPVDMFVTTADAELEPPIITVNTVLSLLAV------DYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKY 163 (595)
Q Consensus 90 ~~~P~V~V~IptynE~~Ep~~vv~~tl~s~l~l------dYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~ 163 (595)
+..|.|+|+||+|||++ .+.++++++.+. ++|...++|+|+||||+|.|.+.+++.+ +++
T Consensus 67 ~~~~~isVVIP~yNe~~----~i~~~L~~l~~~~~~~~~~~~~~~~EIIVVDDgStD~T~~i~~~~~----------~~~ 132 (333)
T PTZ00260 67 DSDVDLSIVIPAYNEED----RLPKMLKETIKYLESRSRKDPKFKYEIIIVNDGSKDKTLKVAKDFW----------RQN 132 (333)
T ss_pred CCCeEEEEEEeeCCCHH----HHHHHHHHHHHHHHhhhccCCCCCEEEEEEeCCCCCchHHHHHHHH----------Hhc
Confidence 45689999999999875 788888887653 2455579999999999999987665432 111
Q ss_pred ccccCCcccccCCCCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCC
Q 007647 164 NVQIRAPFRYFPDSEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTN 243 (595)
Q Consensus 164 gv~~r~~~~~~~~~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~ 243 (595)
. ...++++++..+ .+.||++|+|.|++ .++
T Consensus 133 ~-----------------------------------------~~~~~i~vi~~~-----~N~G~~~A~~~Gi~----~a~ 162 (333)
T PTZ00260 133 I-----------------------------------------NPNIDIRLLSLL-----RNKGKGGAVRIGML----ASR 162 (333)
T ss_pred C-----------------------------------------CCCCcEEEEEcC-----CCCChHHHHHHHHH----Hcc
Confidence 0 001246677654 34689999999999 689
Q ss_pred CCEEEEEcCCCCCCchHHHHHHHhhhcCCCCCCcEEEEeC
Q 007647 244 APFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQS 283 (595)
Q Consensus 244 ~d~vl~~DAD~~~~~pd~L~~~v~~f~d~~~d~~vg~VQ~ 283 (595)
||+|+++|||... +|+.+.+++..+.+- .++.+++|.+
T Consensus 163 gd~I~~~DaD~~~-~~~~l~~l~~~l~~~-~~~~~dvV~G 200 (333)
T PTZ00260 163 GKYILMVDADGAT-DIDDFDKLEDIMLKI-EQNGLGIVFG 200 (333)
T ss_pred CCEEEEEeCCCCC-CHHHHHHHHHHHHHh-hccCCceEEe
Confidence 9999999999997 799998888877421 1344555554
No 61
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex
Probab=99.49 E-value=3.1e-13 Score=128.92 Aligned_cols=118 Identities=17% Similarity=0.153 Sum_probs=91.4
Q ss_pred EEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhcccccCCcccccCC
Q 007647 97 MFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFPD 176 (595)
Q Consensus 97 V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~r~~~~~~~~ 176 (595)
|+||+||++. .+.+++.++.++.|+....+|+|+||+++|.|.+.+++..+
T Consensus 1 iii~~~n~~~----~l~~~l~sl~~~~~~~~~~eiivvd~~s~d~~~~~~~~~~~------------------------- 51 (185)
T cd04179 1 VVIPAYNEEE----NIPELVERLLAVLEEGYDYEIIVVDDGSTDGTAEIARELAA------------------------- 51 (185)
T ss_pred CeecccChHh----hHHHHHHHHHHHhccCCCEEEEEEcCCCCCChHHHHHHHHH-------------------------
Confidence 6899999764 89999999999998655899999999999998766654210
Q ss_pred CCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEEcCCCCC
Q 007647 177 SEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYA 256 (595)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl~~DAD~~~ 256 (595)
..+.++++..++ ..||++|+|.+++ .+++|+++++|+|..+
T Consensus 52 ------------------------------~~~~~~~~~~~~-----n~G~~~a~n~g~~----~a~gd~i~~lD~D~~~ 92 (185)
T cd04179 52 ------------------------------RVPRVRVIRLSR-----NFGKGAAVRAGFK----AARGDIVVTMDADLQH 92 (185)
T ss_pred ------------------------------hCCCeEEEEccC-----CCCccHHHHHHHH----HhcCCEEEEEeCCCCC
Confidence 123455665543 4589999999999 6889999999999997
Q ss_pred CchHHHHHHHhhhcCCCCCCcEEEEeCCccc
Q 007647 257 NNPEIVLQAMCLHLGSKNENEFAFIQSPQYF 287 (595)
Q Consensus 257 ~~pd~L~~~v~~f~d~~~d~~vg~VQ~pq~f 287 (595)
.|++|.+++..+. .++.++|.++...
T Consensus 93 -~~~~l~~l~~~~~----~~~~~~v~g~~~~ 118 (185)
T cd04179 93 -PPEDIPKLLEKLL----EGGADVVIGSRFV 118 (185)
T ss_pred -CHHHHHHHHHHHh----ccCCcEEEEEeec
Confidence 7999999998864 2344555555443
No 62
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.
Probab=99.48 E-value=1.1e-12 Score=125.40 Aligned_cols=155 Identities=14% Similarity=0.087 Sum_probs=99.6
Q ss_pred EEEeccCCCCCChhHHHHHHHHHHhc---CCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhcccccCCcccc
Q 007647 97 MFVTTADAELEPPIITVNTVLSLLAV---DYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRY 173 (595)
Q Consensus 97 V~IptynE~~Ep~~vv~~tl~s~l~l---dYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~r~~~~~ 173 (595)
|+||+|||++ .+.+++.++.++ .++ .++|+|+||||+|.|.+.+++..+
T Consensus 1 viIp~~n~~~----~l~~~l~sl~~~~~~~~~--~~eiivvdd~s~d~t~~~~~~~~~---------------------- 52 (181)
T cd04187 1 IVVPVYNEEE----NLPELYERLKAVLESLGY--DYEIIFVDDGSTDRTLEILRELAA---------------------- 52 (181)
T ss_pred CEEeecCchh----hHHHHHHHHHHHHHhcCC--CeEEEEEeCCCCccHHHHHHHHHh----------------------
Confidence 6899999774 676766666543 355 789999999999998766543210
Q ss_pred cCCCCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEEcCC
Q 007647 174 FPDSEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCD 253 (595)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl~~DAD 253 (595)
..|++.++..++ +.||++|+|.|++ .+.+|+|+++|+|
T Consensus 53 ---------------------------------~~~~i~~i~~~~-----n~G~~~a~n~g~~----~a~~d~i~~~D~D 90 (181)
T cd04187 53 ---------------------------------RDPRVKVIRLSR-----NFGQQAALLAGLD----HARGDAVITMDAD 90 (181)
T ss_pred ---------------------------------hCCCEEEEEecC-----CCCcHHHHHHHHH----hcCCCEEEEEeCC
Confidence 124667776543 4689999999999 6889999999999
Q ss_pred CCCCchHHHHHHHhhhcCCCCCCcEEEEeCCccccCchhh--hHhhHhhhhhhhcccCCceeccccceeehhhhh
Q 007647 254 MYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYDRPEN--LCILNEYIGKGIVGIQGPFYQGTGTFHRRDVVY 326 (595)
Q Consensus 254 ~~~~~pd~L~~~v~~f~d~~~d~~vg~VQ~pq~f~d~~~~--~~~f~~~~~~g~~~~~~~~~~Gtg~~~rr~al~ 326 (595)
..+ +|++|.+++..+ + .+.++............... ...++.. .....+..-....|+..++||+++.
T Consensus 91 ~~~-~~~~l~~l~~~~-~--~~~~~v~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~r~~~~ 160 (181)
T cd04187 91 LQD-PPELIPEMLAKW-E--EGYDVVYGVRKNRKESWLKRLTSKLFYRL-INKLSGVDIPDNGGDFRLMDRKVVD 160 (181)
T ss_pred CCC-CHHHHHHHHHHH-h--CCCcEEEEEecCCcchHHHHHHHHHHHHH-HHHHcCCCCCCCCCCEEEEcHHHHH
Confidence 997 799999999874 2 23444433222111111111 1222211 1111222233345667789999883
No 63
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional
Probab=99.47 E-value=2.1e-13 Score=142.77 Aligned_cols=124 Identities=14% Similarity=0.083 Sum_probs=92.0
Q ss_pred CCCCCeEEEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhcccccCC
Q 007647 90 QELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRA 169 (595)
Q Consensus 90 ~~~P~V~V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~r~ 169 (595)
...|+|+|+||+|||++ .|.++|.++.++.++....+|+|+||||+|.|.+.+++. +.+.
T Consensus 28 ~~~~~vSVVIPayNee~----~I~~~l~sl~~~~~~~~~~EIIVVDDgStD~T~~ia~~~--------------~~~v-- 87 (306)
T PRK13915 28 KAGRTVSVVLPALNEEE----TVGKVVDSIRPLLMEPLVDELIVIDSGSTDATAERAAAA--------------GARV-- 87 (306)
T ss_pred cCCCCEEEEEecCCcHH----HHHHHHHHHHHHhccCCCcEEEEEeCCCccHHHHHHHHh--------------cchh--
Confidence 35689999999999876 899999999987652224699999999999988665432 1100
Q ss_pred cccccCCCCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEE
Q 007647 170 PFRYFPDSEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLN 249 (595)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl~ 249 (595)
. +....+.+. ..++||++|+|.++. .+++|+|++
T Consensus 88 ----~----------------------------------~~~~~~~~~----~~n~Gkg~A~~~g~~----~a~gd~vv~ 121 (306)
T PRK13915 88 ----V----------------------------------SREEILPEL----PPRPGKGEALWRSLA----ATTGDIVVF 121 (306)
T ss_pred ----h----------------------------------cchhhhhcc----ccCCCHHHHHHHHHH----hcCCCEEEE
Confidence 0 000001110 134689999999999 689999999
Q ss_pred EcCCCC-CCchHHHHHHHhhhcCCCCCCcEEEEeC
Q 007647 250 VDCDMY-ANNPEIVLQAMCLHLGSKNENEFAFIQS 283 (595)
Q Consensus 250 ~DAD~~-~~~pd~L~~~v~~f~d~~~d~~vg~VQ~ 283 (595)
+|||.. . +|++|.+++..+. .++++++|.+
T Consensus 122 lDaD~~~~-~p~~l~~l~~~l~---~~~~~~~V~g 152 (306)
T PRK13915 122 VDADLINF-DPMFVPGLLGPLL---TDPGVHLVKA 152 (306)
T ss_pred EeCccccC-CHHHHHHHHHHHH---hCCCceEEEE
Confidence 999997 5 7999999998885 4677888864
No 64
>TIGR01556 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids.
Probab=99.41 E-value=4.4e-12 Score=130.51 Aligned_cols=107 Identities=17% Similarity=-0.021 Sum_probs=78.2
Q ss_pred ccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhcccccCCcccccCCCCCC
Q 007647 101 TADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFPDSEPS 180 (595)
Q Consensus 101 tynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~r~~~~~~~~~~~~ 180 (595)
|||++ .+.+.++|.+++.+. .+|+|+||||++. +.+.+..
T Consensus 2 tyn~~---~~~l~~~l~sl~~q~-----~~iiVVDN~S~~~--~~~~~~~------------------------------ 41 (281)
T TIGR01556 2 TFNPD---LEHLGELITSLPKQV-----DRIIAVDNSPHSD--QPLKNAR------------------------------ 41 (281)
T ss_pred ccCcc---HHHHHHHHHHHHhcC-----CEEEEEECcCCCc--HhHHHHh------------------------------
Confidence 89954 358999999999874 3699999998763 1121110
Q ss_pred CCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEEcCCCCCCchH
Q 007647 181 DSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPE 260 (595)
Q Consensus 181 ~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl~~DAD~~~~~pd 260 (595)
...|+++++..+ .+.|.|+|+|.|++..- ..++|+|+++|.|.++ +++
T Consensus 42 -------------------------~~~~~i~~i~~~-----~N~G~a~a~N~Gi~~a~-~~~~d~i~~lD~D~~~-~~~ 89 (281)
T TIGR01556 42 -------------------------LRGQKIALIHLG-----DNQGIAGAQNQGLDASF-RRGVQGVLLLDQDSRP-GNA 89 (281)
T ss_pred -------------------------ccCCCeEEEECC-----CCcchHHHHHHHHHHHH-HCCCCEEEEECCCCCC-CHH
Confidence 012577888754 34689999999998421 1378999999999997 799
Q ss_pred HHHHHHhhhcCCCCCC-cEEEEe
Q 007647 261 IVLQAMCLHLGSKNEN-EFAFIQ 282 (595)
Q Consensus 261 ~L~~~v~~f~d~~~d~-~vg~VQ 282 (595)
+|.+++..+. .++ ++++|+
T Consensus 90 ~l~~l~~~~~---~~~~~~~~~~ 109 (281)
T TIGR01556 90 FLAAQWKLLS---AENGQACALG 109 (281)
T ss_pred HHHHHHHHHH---hcCCceEEEC
Confidence 9999998874 233 788775
No 65
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ].
Probab=99.40 E-value=1.2e-11 Score=127.91 Aligned_cols=108 Identities=19% Similarity=0.232 Sum_probs=73.6
Q ss_pred EEEEeccCCCCCChhH---HHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhcccccCCccc
Q 007647 96 DMFVTTADAELEPPII---TVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFR 172 (595)
Q Consensus 96 ~V~IptynE~~Ep~~v---v~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~r~~~~ 172 (595)
||+||.+|.+. ...+ +..++.++.... +..+++|+|+|||+++.+.+.+++.. ++.+
T Consensus 1 SiIIPv~~~~~-~~~i~~~l~~~l~~l~~~~-~~~~~eiIvvd~~s~~~~~~~l~~~~----------~~~~-------- 60 (281)
T PF10111_consen 1 SIIIPVRNRSE-RPDILERLRNCLESLSQFQ-SDPDFEIIVVDDGSSDEFDEELKKLC----------EKNG-------- 60 (281)
T ss_pred CEEEEecCCcc-chHHHHHHHHHHHHHHhcC-CCCCEEEEEEECCCchhHHHHHHHHH----------hccC--------
Confidence 68999999873 3222 333344444422 22489999999999997655554432 1211
Q ss_pred ccCCCCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEEcC
Q 007647 173 YFPDSEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDC 252 (595)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl~~DA 252 (595)
...|+.-+. ++ ..-++|.|.|.|++ .+++|+|+++|+
T Consensus 61 -------------------------------------~~~~i~~~~-~~-~~f~~a~arN~g~~----~A~~d~l~flD~ 97 (281)
T PF10111_consen 61 -------------------------------------FIRYIRHED-NG-EPFSRAKARNIGAK----YARGDYLIFLDA 97 (281)
T ss_pred -------------------------------------ceEEEEcCC-CC-CCcCHHHHHHHHHH----HcCCCEEEEEcC
Confidence 223554331 11 22489999999999 789999999999
Q ss_pred CCCCCchHHHHHHHh
Q 007647 253 DMYANNPEIVLQAMC 267 (595)
Q Consensus 253 D~~~~~pd~L~~~v~ 267 (595)
|+++ .|+++.+++.
T Consensus 98 D~i~-~~~~i~~~~~ 111 (281)
T PF10111_consen 98 DCIP-SPDFIEKLLN 111 (281)
T ss_pred Ceee-CHHHHHHHHH
Confidence 9997 7999999998
No 66
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional
Probab=99.39 E-value=1.1e-11 Score=130.84 Aligned_cols=109 Identities=15% Similarity=0.093 Sum_probs=82.6
Q ss_pred CCCeEEEEeccCCCCCChhHHHHHHHHHH---hcCCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhcccccC
Q 007647 92 LPPVDMFVTTADAELEPPIITVNTVLSLL---AVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIR 168 (595)
Q Consensus 92 ~P~V~V~IptynE~~Ep~~vv~~tl~s~l---~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~r 168 (595)
.++++|+||+|||++ .+.++++++. ..-.+ .+||+|+||||+|.|.+.+++.++ +.
T Consensus 5 ~~~vSVVIP~yNE~~----~i~~~l~~l~~~~~~~~~--~~EIIvVDDgS~D~T~~il~~~~~----------~~----- 63 (325)
T PRK10714 5 IKKVSVVIPVYNEQE----SLPELIRRTTAACESLGK--EYEILLIDDGSSDNSAEMLVEAAQ----------AP----- 63 (325)
T ss_pred CCeEEEEEcccCchh----hHHHHHHHHHHHHHhCCC--CEEEEEEeCCCCCcHHHHHHHHHh----------hc-----
Confidence 367999999999885 6666666554 22223 689999999999999987765431 00
Q ss_pred CcccccCCCCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEE
Q 007647 169 APFRYFPDSEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFML 248 (595)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl 248 (595)
.++++.+..+ .+.||++|+|+|++ .++||+++
T Consensus 64 ---------------------------------------~~~v~~i~~~-----~n~G~~~A~~~G~~----~A~gd~vv 95 (325)
T PRK10714 64 ---------------------------------------DSHIVAILLN-----RNYGQHSAIMAGFS----HVTGDLII 95 (325)
T ss_pred ---------------------------------------CCcEEEEEeC-----CCCCHHHHHHHHHH----hCCCCEEE
Confidence 1234444333 24689999999999 68999999
Q ss_pred EEcCCCCCCchHHHHHHHhhhc
Q 007647 249 NVDCDMYANNPEIVLQAMCLHL 270 (595)
Q Consensus 249 ~~DAD~~~~~pd~L~~~v~~f~ 270 (595)
++|||... +|+.+.+++..+.
T Consensus 96 ~~DaD~q~-~p~~i~~l~~~~~ 116 (325)
T PRK10714 96 TLDADLQN-PPEEIPRLVAKAD 116 (325)
T ss_pred EECCCCCC-CHHHHHHHHHHHH
Confidence 99999997 6999999998874
No 67
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=99.36 E-value=1.8e-11 Score=110.49 Aligned_cols=113 Identities=22% Similarity=0.258 Sum_probs=86.0
Q ss_pred EEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhcccccCCcccccCC
Q 007647 97 MFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFPD 176 (595)
Q Consensus 97 V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~r~~~~~~~~ 176 (595)
|+||+||+. +.+..|+.+++.++|+ ..+++|+||++++.+.+.+.+..+ +
T Consensus 1 iii~~~~~~----~~l~~~l~s~~~~~~~--~~~i~i~~~~~~~~~~~~~~~~~~----------~-------------- 50 (156)
T cd00761 1 VIIPAYNEE----PYLERCLESLLAQTYP--NFEVIVVDDGSTDGTLEILEEYAK----------K-------------- 50 (156)
T ss_pred CEEeecCcH----HHHHHHHHHHHhCCcc--ceEEEEEeCCCCccHHHHHHHHHh----------c--------------
Confidence 589999954 3899999999999996 788999999999987766544321 0
Q ss_pred CCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEEcCCCCC
Q 007647 177 SEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYA 256 (595)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl~~DAD~~~ 256 (595)
.+...++..+ ...+|++++|.++. ..++|+++++|+|.++
T Consensus 51 -------------------------------~~~~~~~~~~-----~~~g~~~~~~~~~~----~~~~d~v~~~d~D~~~ 90 (156)
T cd00761 51 -------------------------------DPRVIRVINE-----ENQGLAAARNAGLK----AARGEYILFLDADDLL 90 (156)
T ss_pred -------------------------------CCCeEEEEec-----CCCChHHHHHHHHH----HhcCCEEEEECCCCcc
Confidence 0122333333 35689999999999 5789999999999997
Q ss_pred CchHHHHHHHhhhcCCCCCCcEEEEeC
Q 007647 257 NNPEIVLQAMCLHLGSKNENEFAFIQS 283 (595)
Q Consensus 257 ~~pd~L~~~v~~f~d~~~d~~vg~VQ~ 283 (595)
+|+++..++..+. .+++.++|++
T Consensus 91 -~~~~~~~~~~~~~---~~~~~~~v~~ 113 (156)
T cd00761 91 -LPDWLERLVAELL---ADPEADAVGG 113 (156)
T ss_pred -CccHHHHHHHHHh---cCCCceEEec
Confidence 7999988754443 5677777763
No 68
>COG1216 Predicted glycosyltransferases [General function prediction only]
Probab=99.34 E-value=1.4e-11 Score=128.85 Aligned_cols=121 Identities=16% Similarity=0.214 Sum_probs=94.8
Q ss_pred CCCeEEEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhcccccCCcc
Q 007647 92 LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPF 171 (595)
Q Consensus 92 ~P~V~V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~r~~~ 171 (595)
.|.++++|++||..+ .+.+++.++.+++||.+ .|+++|+|++|.|.+.+++.
T Consensus 2 ~~~i~~iiv~yn~~~----~l~~~l~~l~~~~~~~~--~iv~vDn~s~d~~~~~~~~~---------------------- 53 (305)
T COG1216 2 MPKISIIIVTYNRGE----DLVECLASLAAQTYPDD--VIVVVDNGSTDGSLEALKAR---------------------- 53 (305)
T ss_pred CcceEEEEEecCCHH----HHHHHHHHHhcCCCCCc--EEEEccCCCCCCCHHHHHhh----------------------
Confidence 478999999999775 99999999999999954 56689999999887655331
Q ss_pred cccCCCCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCC-EEEEE
Q 007647 172 RYFPDSEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAP-FMLNV 250 (595)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d-~vl~~ 250 (595)
..|++.++.-. ++.|=||+.|.+++.. .++++ +++++
T Consensus 54 -----------------------------------~~~~v~~i~~~-----~NlG~agg~n~g~~~a--~~~~~~~~l~L 91 (305)
T COG1216 54 -----------------------------------FFPNVRLIENG-----ENLGFAGGFNRGIKYA--LAKGDDYVLLL 91 (305)
T ss_pred -----------------------------------cCCcEEEEEcC-----CCccchhhhhHHHHHH--hcCCCcEEEEE
Confidence 02577888654 4567899999998842 23333 99999
Q ss_pred cCCCCCCchHHHHHHHhhhcCCCCCCcEEEEeCCcc
Q 007647 251 DCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQY 286 (595)
Q Consensus 251 DAD~~~~~pd~L~~~v~~f~d~~~d~~vg~VQ~pq~ 286 (595)
+-|.++ +|++|.+++..+- .++.++.|+....
T Consensus 92 N~D~~~-~~~~l~~ll~~~~---~~~~~~~~~~~i~ 123 (305)
T COG1216 92 NPDTVV-EPDLLEELLKAAE---EDPAAGVVGPLIR 123 (305)
T ss_pred cCCeee-ChhHHHHHHHHHH---hCCCCeEeeeeEe
Confidence 999887 8999999999885 6778888875444
No 69
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.22 E-value=8.4e-11 Score=109.48 Aligned_cols=101 Identities=20% Similarity=0.229 Sum_probs=78.5
Q ss_pred CCCeEEEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhcccccCCcc
Q 007647 92 LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPF 171 (595)
Q Consensus 92 ~P~V~V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~r~~~ 171 (595)
.|.++|+|||||+++ .+.++|.|++++.|+ ..+|+|+||||+|.|.+.+.+... +
T Consensus 2 ~~~~siiip~~n~~~----~l~~~l~s~~~q~~~--~~eiivvddgs~d~t~~~~~~~~~----------~--------- 56 (291)
T COG0463 2 MPKVSVVIPTYNEEE----YLPEALESLLNQTYK--DFEIIVVDDGSTDGTTEIAIEYGA----------K--------- 56 (291)
T ss_pred CccEEEEEeccchhh----hHHHHHHHHHhhhhc--ceEEEEEeCCCCCChHHHHHHHhh----------h---------
Confidence 488999999999875 999999999999999 478999999999999876654321 0
Q ss_pred cccCCCCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEEc
Q 007647 172 RYFPDSEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVD 251 (595)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl~~D 251 (595)
.+.+.....+ ...|++.|+|.++. .+.+|+++.+|
T Consensus 57 ------------------------------------~~~~~~~~~~-----~~~g~~~~~~~~~~----~~~~~~~~~~d 91 (291)
T COG0463 57 ------------------------------------DVRVIRLINE-----RNGGLGAARNAGLE----YARGDYIVFLD 91 (291)
T ss_pred ------------------------------------cceEEEeecc-----cCCChHHHHHhhHH----hccCCEEEEEc
Confidence 0112222222 45799999999999 67889999999
Q ss_pred CCCCCCchHHHH
Q 007647 252 CDMYANNPEIVL 263 (595)
Q Consensus 252 AD~~~~~pd~L~ 263 (595)
+|.+ ..+....
T Consensus 92 ~d~~-~~~~~~~ 102 (291)
T COG0463 92 ADDQ-HPPELIP 102 (291)
T ss_pred cCCC-CCHHHHH
Confidence 9999 6444443
No 70
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.
Probab=99.22 E-value=1e-10 Score=117.04 Aligned_cols=97 Identities=14% Similarity=0.116 Sum_probs=77.7
Q ss_pred CeEEEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhcccccCCcccc
Q 007647 94 PVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRY 173 (595)
Q Consensus 94 ~V~V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~r~~~~~ 173 (595)
+|+|+||+|||+. .+.++|.|+..+. + +|+|+||||+|.|.+.++ +++
T Consensus 1 ~isvii~~~Ne~~----~l~~~l~sl~~~~---~--eiivvD~gStD~t~~i~~--------------~~~--------- 48 (229)
T cd02511 1 TLSVVIITKNEER----NIERCLESVKWAV---D--EIIVVDSGSTDRTVEIAK--------------EYG--------- 48 (229)
T ss_pred CEEEEEEeCCcHH----HHHHHHHHHhccc---C--EEEEEeCCCCccHHHHHH--------------HcC---------
Confidence 4899999999875 8999999998652 1 799999999999875442 122
Q ss_pred cCCCCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEEcCC
Q 007647 174 FPDSEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCD 253 (595)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl~~DAD 253 (595)
+.++.. ...|++.+.|.|++ .+++|+|+++|||
T Consensus 49 -------------------------------------~~v~~~------~~~g~~~~~n~~~~----~a~~d~vl~lDaD 81 (229)
T cd02511 49 -------------------------------------AKVYQR------WWDGFGAQRNFALE----LATNDWVLSLDAD 81 (229)
T ss_pred -------------------------------------CEEEEC------CCCChHHHHHHHHH----hCCCCEEEEEeCC
Confidence 233333 23589999999999 6899999999999
Q ss_pred CCCCchHHHHHHHhhhc
Q 007647 254 MYANNPEIVLQAMCLHL 270 (595)
Q Consensus 254 ~~~~~pd~L~~~v~~f~ 270 (595)
.++ +|+.+.++...+.
T Consensus 82 ~~~-~~~~~~~l~~~~~ 97 (229)
T cd02511 82 ERL-TPELADEILALLA 97 (229)
T ss_pred cCc-CHHHHHHHHHHHh
Confidence 997 7999999988775
No 71
>KOG2571 consensus Chitin synthase/hyaluronan synthase (glycosyltransferases) [Cell wall/membrane/envelope biogenesis]
Probab=99.13 E-value=9.6e-10 Score=125.67 Aligned_cols=162 Identities=17% Similarity=0.192 Sum_probs=108.7
Q ss_pred ChHHHHHHHHHhcCCCCCCCEEEEEcCCCCCCchHHHHHHHhhhcCCCCCCcEEEEeCCccccCc-------hhhhHhhH
Q 007647 226 YKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYDR-------PENLCILN 298 (595)
Q Consensus 226 ~KAgaLN~~l~~~~~~~~~d~vl~~DAD~~~~~pd~L~~~v~~f~d~~~d~~vg~VQ~pq~f~d~-------~~~~~~f~ 298 (595)
+|--.+|.+.... ..+-++|+++|+|+.+ +|+++.+++.-|- .||+||.+.+ +..+. +++.+...
T Consensus 425 ~~r~~~y~~~~~L--~~~v~~il~vD~dT~~-~P~ai~~lv~~f~---~dp~VggaCG--~I~~~~~~w~v~~Q~FEY~I 496 (862)
T KOG2571|consen 425 QHRWVMYTAFKAL--MPSVDYILVVDADTRL-DPDALYHLVKVFD---EDPQVGGACG--RILNKGGSWVVAYQNFEYAI 496 (862)
T ss_pred HHHHHHHHHHHHh--cCcceEEEEecCCCcc-CcHHHHHHHHHhc---cCcccceecc--ccccCCCceEEeHHHHHHHH
Confidence 4444555555532 3556799999999997 8999999999883 6899999877 22211 22211111
Q ss_pred -hhhhhhhcccCCceeccccce--eehhhhhcccchhhhhccchhHHHHHHhhCCcHHHHHHHHHhhcCCcCCCCCchhh
Q 007647 299 -EYIGKGIVGIQGPFYQGTGTF--HRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISR 375 (595)
Q Consensus 299 -~~~~~g~~~~~~~~~~Gtg~~--~rr~al~g~~~~~~~~~~~~~~~~~~~~~g~s~~f~~s~~~~~r~~~~~~~~~~~~ 375 (595)
...++......|-+.|-.||+ +|-+||.+-.+ +..+|..
T Consensus 497 sh~l~Ka~ESvFG~VsclPGcfs~yR~~aL~~~~~--------------~~~y~~~------------------------ 538 (862)
T KOG2571|consen 497 SHNLQKATESVFGCVSCLPGCFSLYRASALMDQFV--------------EYFYGEK------------------------ 538 (862)
T ss_pred HHHHHHhhhhhceeEEecCchhHHHHHHHHhcchH--------------Hhhhchh------------------------
Confidence 124555556667677767765 77777742111 0001100
Q ss_pred hHHHHhHhhccccccCCCcCccccCCCCCccchHHHHHHHHhCCcEEEEeCCCCcceeccCCCCHHHHHHHHHHhhhh
Q 007647 376 SLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATG 453 (595)
Q Consensus 376 ~~~~~~~vg~c~ye~~~~w~~~~G~~~~~itED~~t~~~l~~~Gwr~~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G 453 (595)
.-|. .-|..+ +..||-.+..++..+||+..|+. ++.+.+++|+++.+++.||+||..|
T Consensus 539 ------~~~~-----------~~~~~~-~~geDR~L~~~llskgy~l~Y~a--~s~a~t~~Pe~~~efl~QrrRW~~s 596 (862)
T KOG2571|consen 539 ------FSGP-----------RHGIQY-SLGEDRWLCTLLLSKGYRLKYVA--ASDAETEAPESFLEFLNQRRRWLNS 596 (862)
T ss_pred ------hcCc-----------cccccc-ccchhHHHHHHHHhccceeeeec--cccccccCcHhHHHHHHHhhhhccc
Confidence 0000 002333 48999999999999999999997 4678999999999999999999999
No 72
>KOG2547 consensus Ceramide glucosyltransferase [Lipid transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=98.94 E-value=2.8e-08 Score=103.22 Aligned_cols=229 Identities=21% Similarity=0.269 Sum_probs=145.0
Q ss_pred CCCCeEEEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhcccccCCc
Q 007647 91 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAP 170 (595)
Q Consensus 91 ~~P~V~V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~r~~ 170 (595)
.+|.|+|+-|--.-++ .+..-+++-...+|| ++|++.+-+.++|.-.+.++.. .+||.
T Consensus 83 ~LPgVSiikPl~G~d~----nl~~Nlesffts~Y~--~~ElLfcv~s~eDpAi~vv~~L----------l~kyp------ 140 (431)
T KOG2547|consen 83 KLPGVSIIKPLKGVDP----NLYHNLESFFTSQYH--KYELLFCVESSEDPAIEVVERL----------LKKYP------ 140 (431)
T ss_pred CCCCceEEeecccCCc----hhHHhHHHHHhhccC--ceEEEEEEccCCCcHHHHHHHH----------HhhCC------
Confidence 6899999999998664 788889999999999 9999998888888644443322 23331
Q ss_pred ccccCCCCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEE
Q 007647 171 FRYFPDSEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNV 250 (595)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl~~ 250 (595)
++. .-.++.-++ ..-.-|-.|+--|.+ .++.|+|++.
T Consensus 141 ----------------------~Vd--------------Aklf~gG~~---vg~npKInN~mpgy~----~a~ydlvlis 177 (431)
T KOG2547|consen 141 ----------------------NVD--------------AKLFFGGEK---VGLNPKINNMMPGYR----AAKYDLVLIS 177 (431)
T ss_pred ----------------------Ccc--------------eEEEEcccc---cccChhhhccCHHHH----HhcCCEEEEe
Confidence 110 011223222 123468888888888 6899999999
Q ss_pred cCCCCCCchHHHHHHHhhhcCCCCCCcEEEE-eCCccccCchhhhHhhHhhhhhhhcccCCceeccccceeehhhhhccc
Q 007647 251 DCDMYANNPEIVLQAMCLHLGSKNENEFAFI-QSPQYFYDRPENLCILNEYIGKGIVGIQGPFYQGTGTFHRRDVVYGLC 329 (595)
Q Consensus 251 DAD~~~~~pd~L~~~v~~f~d~~~d~~vg~V-Q~pq~f~d~~~~~~~f~~~~~~g~~~~~~~~~~Gtg~~~rr~al~g~~ 329 (595)
|.|-.+ .||.+..++.-|+ ..+++|+| |+|-.+. += |.|..-...+-||. +-|-.+-|-.
T Consensus 178 DsgI~m-~pdtildm~t~M~---shekmalvtq~py~~d-r~------------Gf~atle~~~fgTs--h~r~yl~~n~ 238 (431)
T KOG2547|consen 178 DSGIFM-KPDTILDMATTMM---SHEKMALVTQTPYCKD-RQ------------GFDATLEQVYFGTS--HPRIYLSGNV 238 (431)
T ss_pred cCCeee-cCchHHHHHHhhh---cccceeeecCCceeec-cc------------cchhhhhheeeccC--CceEEEcccc
Confidence 999998 8999999999887 56899999 6665443 11 11111111222221 1111111000
Q ss_pred chhhhhccchhHHHHHHhhCCcHHHHHHHHHhhcCCcCCCCCchhhhHHHHhHhhccccccCCCcCccccCC--CCCccc
Q 007647 330 LDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCL--YGATAE 407 (595)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~g~s~~f~~s~~~~~r~~~~~~~~~~~~~~~~~~~vg~c~ye~~~~w~~~~G~~--~~~itE 407 (595)
.. ....-|.|+.+ +.+++.+.| |+. .+.+.|
T Consensus 239 ~~------------~~c~tgms~~m---------------------rK~~ld~~g--------------gi~~f~~yLae 271 (431)
T KOG2547|consen 239 LG------------FNCSTGMSSMM---------------------RKEALDECG--------------GISAFGGYLAE 271 (431)
T ss_pred cc------------ccccccHHHHH---------------------HHHHHHHhc--------------cHHHHHHHHHH
Confidence 00 00000111111 223444444 322 247999
Q ss_pred hHHHHHHHHhCCcEEEEeCCCCcceeccCCCCHHHHHHHHHHhhh
Q 007647 408 DNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWAT 452 (595)
Q Consensus 408 D~~t~~~l~~~Gwr~~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa~ 452 (595)
|...+-.+..+||++.+.. .++-...+-.+...+..|-.||..
T Consensus 272 dyFaaksllSRG~ksaist--~palQnSas~~mssf~~Ri~rwvk 314 (431)
T KOG2547|consen 272 DYFAAKSLLSRGWKSAIST--HPALQNSASVTMSSFLDRIIRWVK 314 (431)
T ss_pred HHHHHHHHHhhhhhhhhcc--cchhhhhhhhHHHHHHHHHHHhhh
Confidence 9999999999999999987 344456667889999999999964
No 73
>KOG2978 consensus Dolichol-phosphate mannosyltransferase [General function prediction only]
Probab=98.87 E-value=2.1e-08 Score=95.25 Aligned_cols=120 Identities=15% Similarity=0.177 Sum_probs=88.9
Q ss_pred CCeEEEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhcccccCCccc
Q 007647 93 PPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFR 172 (595)
Q Consensus 93 P~V~V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~r~~~~ 172 (595)
+.-+|++|||||. |...++...+...+... .-+.+|+++||+|.|.|.+...+.+ +.||
T Consensus 3 ~kYsvilPtYnEk-~Nlpi~~~li~~~~~e~--~~~~eiIivDD~SpDGt~~~a~~L~----------k~yg-------- 61 (238)
T KOG2978|consen 3 IKYSVILPTYNEK-ENLPIITRLIAKYMSEE--GKKYEIIIVDDASPDGTQEVAKALQ----------KIYG-------- 61 (238)
T ss_pred cceeEEeccccCC-CCCeeeHHHHHhhhhhh--cCceEEEEEeCCCCCccHHHHHHHH----------HHhC--------
Confidence 5689999999987 66556666665554322 2378899999999999987765543 1222
Q ss_pred ccCCCCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEEcC
Q 007647 173 YFPDSEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDC 252 (595)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl~~DA 252 (595)
.+++....|.+ ..|-.-|--+++. +++|+|+++.||
T Consensus 62 -----------------------------------~d~i~l~pR~~-----klGLgtAy~hgl~----~a~g~fiviMDa 97 (238)
T KOG2978|consen 62 -----------------------------------EDNILLKPRTK-----KLGLGTAYIHGLK----HATGDFIVIMDA 97 (238)
T ss_pred -----------------------------------CCcEEEEeccC-----cccchHHHHhhhh----hccCCeEEEEeC
Confidence 24777777764 4577888899999 799999999999
Q ss_pred CCCCCchHHHHHHHhhhcCCCCCCcEEEEe
Q 007647 253 DMYANNPEIVLQAMCLHLGSKNENEFAFIQ 282 (595)
Q Consensus 253 D~~~~~pd~L~~~v~~f~d~~~d~~vg~VQ 282 (595)
|--- +|.++.+.+... .+.+..+|.
T Consensus 98 DlsH-hPk~ipe~i~lq----~~~~~div~ 122 (238)
T KOG2978|consen 98 DLSH-HPKFIPEFIRLQ----KEGNYDIVL 122 (238)
T ss_pred ccCC-CchhHHHHHHHh----hccCcceee
Confidence 9885 799998877654 456666665
No 74
>KOG2977 consensus Glycosyltransferase [General function prediction only]
Probab=98.82 E-value=3.4e-08 Score=99.43 Aligned_cols=114 Identities=17% Similarity=0.083 Sum_probs=83.2
Q ss_pred CeEEEEeccCCCCCChhHHHHHHHHHHhcCCCC---CCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhcccccCCc
Q 007647 94 PVDMFVTTADAELEPPIITVNTVLSLLAVDYPV---HKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAP 170 (595)
Q Consensus 94 ~V~V~IptynE~~Ep~~vv~~tl~s~l~ldYP~---~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~r~~ 170 (595)
..+|+||+|||+.-=+.++.+++..+. -.|-. =+.+|+|+||||+|.|.+.. ..||+|+|.
T Consensus 68 ~lsVIVpaynE~~ri~~mldeav~~le-~ry~~~~~F~~eiiVvddgs~d~T~~~a----------~k~s~K~~~----- 131 (323)
T KOG2977|consen 68 YLSVIVPAYNEEGRIGAMLDEAVDYLE-KRYLSDKSFTYEIIVVDDGSTDSTVEVA----------LKFSRKLGD----- 131 (323)
T ss_pred eeEEEEecCCcccchHHHHHHHHHHHH-HHhccCCCCceeEEEeCCCCchhHHHHH----------HHHHHHcCc-----
Confidence 689999999988644445555555544 34443 38899999999999887543 347888873
Q ss_pred ccccCCCCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEE
Q 007647 171 FRYFPDSEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNV 250 (595)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl~~ 250 (595)
.+++++.-. ++.||.||..-++- .+.|+++++.
T Consensus 132 --------------------------------------d~irV~~l~-----~nrgKGgAvR~g~l----~~rG~~ilfa 164 (323)
T KOG2977|consen 132 --------------------------------------DNIRVIKLK-----KNRGKGGAVRKGML----SSRGQKILFA 164 (323)
T ss_pred --------------------------------------ceEEEeehh-----ccCCCCcceehhhH----hccCceEEEE
Confidence 145666543 34689999999988 6899999999
Q ss_pred cCCC--CCCchHHHHHHHhhhc
Q 007647 251 DCDM--YANNPEIVLQAMCLHL 270 (595)
Q Consensus 251 DAD~--~~~~pd~L~~~v~~f~ 270 (595)
|||. .+++-+.|.+.+.-..
T Consensus 165 dAdGaTkf~d~ekLe~al~~~~ 186 (323)
T KOG2977|consen 165 DADGATKFADLEKLEKALNDKA 186 (323)
T ss_pred cCCCCccCCCHHHHHHHHHhhc
Confidence 9994 4456778888876443
No 75
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=98.24 E-value=1.1e-05 Score=85.37 Aligned_cols=132 Identities=15% Similarity=0.151 Sum_probs=79.8
Q ss_pred eEEEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhcccccCCccccc
Q 007647 95 VDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 174 (595)
Q Consensus 95 V~V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~r~~~~~~ 174 (595)
+.|+|.+||- ++.+.+||++++++.+..+..+|+|.+||+++++.+.+++ ++.+. .++
T Consensus 2 ~PVlv~ayNR----p~~l~r~LesLl~~~p~~~~~~liIs~DG~~~~~~~~v~~--------------~~~~i----~~i 59 (334)
T cd02514 2 IPVLVIACNR----PDYLRRMLDSLLSYRPSAEKFPIIVSQDGGYEEVADVAKS--------------FGDGV----THI 59 (334)
T ss_pred cCEEEEecCC----HHHHHHHHHHHHhccccCCCceEEEEeCCCchHHHHHHHh--------------hcccc----EEE
Confidence 4689999993 3589999999999864445789999999998865433321 11000 001
Q ss_pred CCCCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEEcCCC
Q 007647 175 PDSEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDM 254 (595)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl~~DAD~ 254 (595)
.... .+....+.++ .+.. ..+-.+|+|. |+|.+.. ..+++.++++|.|.
T Consensus 60 ~~~~----------------------~~~~~~~~~~-~~~~---y~~ia~hyk~-aln~vF~----~~~~~~vIILEDDl 108 (334)
T cd02514 60 QHPP----------------------ISIKNVNPPH-KFQG---YYRIARHYKW-ALTQTFN----LFGYSFVIILEDDL 108 (334)
T ss_pred Eccc----------------------ccccccCccc-ccch---hhHHHHHHHH-HHHHHHH----hcCCCEEEEECCCC
Confidence 0000 0000000000 0000 0000112222 8888887 46899999999999
Q ss_pred CCCchHHH---HHHHhhhcCCCCCCcEEEEeC
Q 007647 255 YANNPEIV---LQAMCLHLGSKNENEFAFIQS 283 (595)
Q Consensus 255 ~~~~pd~L---~~~v~~f~d~~~d~~vg~VQ~ 283 (595)
++ .|||+ .++++.+. .|++|+.|.+
T Consensus 109 ~~-sPdFf~yf~~~l~~y~---~D~~v~~ISa 136 (334)
T cd02514 109 DI-APDFFSYFQATLPLLE---EDPSLWCISA 136 (334)
T ss_pred cc-CHhHHHHHHHHHHHHh---cCCCEEEEEe
Confidence 97 89955 77887775 7899999974
No 76
>KOG3738 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.37 E-value=0.00046 Score=72.84 Aligned_cols=110 Identities=15% Similarity=0.095 Sum_probs=78.9
Q ss_pred CCCCCeEEEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhcccccCC
Q 007647 90 QELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRA 169 (595)
Q Consensus 90 ~~~P~V~V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~r~ 169 (595)
.++|.-+|+|+-+| |--..+.+||.|+++..=++=-.||+++||+|.|.+. |+.++
T Consensus 121 ~dlp~TsviITfHN---EARS~LLRTv~SvlnrsP~~li~EiILVDD~S~Dped----------------~~~L~----- 176 (559)
T KOG3738|consen 121 VDLPPTSVIITFHN---EARSTLLRTVVSVLNRSPEHLIHEIILVDDFSQDPED----------------GKLLK----- 176 (559)
T ss_pred cCCCCceEEEEecc---HHHHHHHHHHHHHHcCChHHhhheeEEecCCCCChHH----------------HHHHh-----
Confidence 46899999999999 5557999999999998755446789999999998532 11111
Q ss_pred cccccCCCCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEE
Q 007647 170 PFRYFPDSEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLN 249 (595)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl~ 249 (595)
.+|+++.++-. .+.|--..-|.+.+ .+.+.++.+
T Consensus 177 -------------------------------------ri~kvr~LRN~-----~ReGLirSRvrGAd----vA~a~vltF 210 (559)
T KOG3738|consen 177 -------------------------------------RIPKVRVLRNN-----EREGLIRSRVRGAD----VAQATVLTF 210 (559)
T ss_pred -------------------------------------hhheeeeeccc-----chhhhhhhhccccc----cccceEEEE
Confidence 12344444321 22344444455555 689999999
Q ss_pred EcCCCCCCchHHHHHHHhhhc
Q 007647 250 VDCDMYANNPEIVLQAMCLHL 270 (595)
Q Consensus 250 ~DAD~~~~~pd~L~~~v~~f~ 270 (595)
+|+-+-+ +.++|.-++....
T Consensus 211 LDSHcEv-N~~WLePLL~Rva 230 (559)
T KOG3738|consen 211 LDSHCEV-NEGWLEPLLERVA 230 (559)
T ss_pred Eecceee-cchhhHHHHHHHh
Confidence 9999999 6899998887664
No 77
>KOG3737 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.29 E-value=0.001 Score=70.02 Aligned_cols=124 Identities=15% Similarity=0.106 Sum_probs=82.7
Q ss_pred cCCCCCeEEEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhcccccC
Q 007647 89 IQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIR 168 (595)
Q Consensus 89 ~~~~P~V~V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~r 168 (595)
++++|+++|+|.-+| |-...+++|+.|++.-.=|+---+|+++||-|+.. -|+|-.
T Consensus 151 pe~Lpt~SVviVFHN---EGws~LmRTVHSVi~RsP~~~l~eivlvDDfSdKe---hLkekL------------------ 206 (603)
T KOG3737|consen 151 PENLPTSSVVIVFHN---EGWSTLMRTVHSVIKRSPRKYLAEIVLVDDFSDKE---HLKEKL------------------ 206 (603)
T ss_pred cccCCcceEEEEEec---CccHHHHHHHHHHHhcCcHHhhheEEEeccCCccH---HHHHHH------------------
Confidence 578999999999999 66789999999999877554455788899988764 333311
Q ss_pred CcccccCCCCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEE
Q 007647 169 APFRYFPDSEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFML 248 (595)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl 248 (595)
+|++..+ -+++-|-|.++ +-|--.|-..+.. .+.|+.++
T Consensus 207 ----------------DeYv~~f-----------------nGlVkV~Rne~----REGLI~aRSiGA~----~atGeV~i 245 (603)
T KOG3737|consen 207 ----------------DEYVKLF-----------------NGLVKVFRNER----REGLIQARSIGAQ----KATGEVLI 245 (603)
T ss_pred ----------------HHHHHHh-----------------cCEEEEEecch----hhhhhhhhccchh----hccccEEE
Confidence 1122211 23455555442 1233333333444 57999999
Q ss_pred EEcCCCCCCchHHHHHHHhhhcCCCCCCcEEEE
Q 007647 249 NVDCDMYANNPEIVLQAMCLHLGSKNENEFAFI 281 (595)
Q Consensus 249 ~~DAD~~~~~pd~L~~~v~~f~d~~~d~~vg~V 281 (595)
++||-+-+ +-++|--++.... .|..|--|
T Consensus 246 fLDAHCEV-ntNWlpPLlAPI~---rdRtvmTV 274 (603)
T KOG3737|consen 246 FLDAHCEV-NTNWLPPLLAPIS---RDRTVMTV 274 (603)
T ss_pred EEecceee-ecccccccccccc---cCceEEEE
Confidence 99999998 6888877776664 55555544
No 78
>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2
Probab=97.19 E-value=0.0014 Score=56.44 Aligned_cols=38 Identities=16% Similarity=0.042 Sum_probs=30.6
Q ss_pred cCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHH
Q 007647 102 ADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLV 147 (595)
Q Consensus 102 ynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~ 147 (595)
+||+. .+..-|..-+++.+. +++|.||||+|.|.+.++
T Consensus 1 rne~~----~L~~wl~~~~~lG~d----~i~i~d~~s~D~t~~~l~ 38 (97)
T PF13704_consen 1 RNEAD----YLPEWLAHHLALGVD----HIYIYDDGSTDGTREILR 38 (97)
T ss_pred CChHH----HHHHHHHHHHHcCCC----EEEEEECCCCccHHHHHH
Confidence 47654 899999998888765 599999999999876653
No 79
>KOG3736 consensus Polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=96.90 E-value=0.0011 Score=74.59 Aligned_cols=115 Identities=13% Similarity=0.085 Sum_probs=86.2
Q ss_pred cCCCCCeEEEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhcccccC
Q 007647 89 IQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIR 168 (595)
Q Consensus 89 ~~~~P~V~V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~r 168 (595)
.+.+|+++|+|+-+| |...++.+||-|+.+..=|.---+|+++||.|+.+-. .+..
T Consensus 138 ~~~Lp~~Svii~f~n---E~~s~llRtv~Svi~rtp~~lLkEIiLVdD~S~~~~l---~~~L------------------ 193 (578)
T KOG3736|consen 138 SDKLPTTSVIIIFHN---EAWSTLLRTVHSVINRTPPYLLKEIILVDDFSDRDHL---KDKL------------------ 193 (578)
T ss_pred ccccCCCceEEEEec---CCCcchhheEEeehccCChhHeEEEEEeecCcchhhh---hhhh------------------
Confidence 456999999999999 6667999999999887755446789999999977421 1000
Q ss_pred CcccccCCCCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEE
Q 007647 169 APFRYFPDSEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFML 248 (595)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl 248 (595)
+++++ .++.+++++.++ +.|+-.|.+.|.+ .+.||+++
T Consensus 194 ----------------d~y~k-----------------~~~~v~i~r~~~-----R~GLIrARl~GA~----~A~geVL~ 231 (578)
T KOG3736|consen 194 ----------------EEYVK-----------------RFSKVRILRTKK-----REGLIRARLLGAS----MATGEVLT 231 (578)
T ss_pred ----------------HHHHh-----------------hhcceeEEeecc-----hhhhHHHHhhhhh----hhhchhee
Confidence 01111 112356666665 4579999999988 79999999
Q ss_pred EEcCCCCCCchHHHHHHHhhhc
Q 007647 249 NVDCDMYANNPEIVLQAMCLHL 270 (595)
Q Consensus 249 ~~DAD~~~~~pd~L~~~v~~f~ 270 (595)
++||-+-+ +..+|.-++....
T Consensus 232 FLDsHcE~-n~gWLePLL~~I~ 252 (578)
T KOG3736|consen 232 FLDSHCEV-NVGWLEPLLARIA 252 (578)
T ss_pred eeecceeE-ecCcchHHHHHhh
Confidence 99999998 6899998888775
No 80
>PF13712 Glyco_tranf_2_5: Glycosyltransferase like family; PDB: 2QGI_A 2NXV_B.
Probab=96.08 E-value=0.015 Score=58.24 Aligned_cols=49 Identities=14% Similarity=0.207 Sum_probs=39.3
Q ss_pred ChHHHHHHHHHhcCCCCCCCEEEEEcCCCCCCchHHHHHHHhhhcCCCCCCcEEEE
Q 007647 226 YKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFI 281 (595)
Q Consensus 226 ~KAgaLN~~l~~~~~~~~~d~vl~~DAD~~~~~pd~L~~~v~~f~d~~~d~~vg~V 281 (595)
.-+.+.|.|++ .++++|++++.=|..+.+++++.+++..|. .++++|.+
T Consensus 41 s~~~~yN~a~~----~a~~~ylvflHqDv~i~~~~~l~~il~~~~---~~~~~G~i 89 (217)
T PF13712_consen 41 SMAAAYNEAME----KAKAKYLVFLHQDVFIINENWLEDILEIFE---EDPNIGMI 89 (217)
T ss_dssp -TTTHHHHHGG----G--SSEEEEEETTEE-SSHHHHHHHHHHHH---H-TTEEEE
T ss_pred CHHHHHHHHHH----hCCCCEEEEEeCCeEEcchhHHHHHHHHHh---hCCCccEE
Confidence 46679999999 799999999999999888999999999995 57888776
No 81
>cd00899 b4GalT Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. Beta-4-Galactosyltransferase transfers galactose from uridine diphosphogalactose to the terminal beta-N-acetylglucosamine residues, hereby forming the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. At least seven homologous beta-4-galactosyltransferase isoforms have been identified that use different types of glycoproteins and glycolipids as substrates. Of the seven identified members of the beta-1,4-galactosyltransferase subfamily (beta1,4-Gal-T1 to -T7), b1,4-Gal-T1 is most characterized (biochemically). It is a Golgi-resident type II membrane enzyme with a cytoplasmic domain, membrane spanning region, and a stem region and catalytic domain facing the lumen.
Probab=95.11 E-value=0.23 Score=49.73 Aligned_cols=53 Identities=13% Similarity=-0.145 Sum_probs=34.6
Q ss_pred cchHHHHHHHHhCCcEEEEeCCCCc----ce------eccCCCCHHHHHHHHHHhhhhhHHHH
Q 007647 406 AEDNLTGLVIHSKGWRSGYCLPIPH----AF------LGCASPSGPAGMRQQKRWATGLLEIL 458 (595)
Q Consensus 406 tED~~t~~~l~~~Gwr~~y~~~~~~----~~------~g~aP~tl~~~~~Qr~RWa~G~~q~~ 458 (595)
.||-+++.||...|.+......... .- ....|.-+.....++.||+..++..+
T Consensus 138 gEDdd~~~Rl~~~g~~~~r~~~~~~~~~hL~H~~~~r~~~N~~r~~~l~~~~~~~~~dGLnsl 200 (219)
T cd00899 138 GEDDDLYNRIKAAGLKITRPSGDTGRYKMIRHIHDKRNRDNPNRFALLQNSRERDHSDGLNSL 200 (219)
T ss_pred cchHHHHHHHHHCCCeEEeccCcccceeeeecCCCcccccCHHHHHHHHhhCeEeccCCccce
Confidence 4999999999999998766542100 00 12234445566677888887777665
No 82
>PF03452 Anp1: Anp1; InterPro: IPR005109 The members of this family (Anp1, Van1 and Mnn9) are membrane proteins required for proper Golgi function. These proteins colocalize within the cis Golgi, where they are physically associated in two distinct complexes [].
Probab=94.82 E-value=0.63 Score=47.97 Aligned_cols=56 Identities=16% Similarity=0.109 Sum_probs=44.6
Q ss_pred CCCCCeEEEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCC--cchHHHHHHH
Q 007647 90 QELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACS--PLNFYSLVEA 149 (595)
Q Consensus 90 ~~~P~V~V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~--d~T~~~l~e~ 149 (595)
.+-|+|=|+.|..|-+. .+.+=...+.+++||++.+.+-++-..++ |.|.+.+.++
T Consensus 22 ~~~e~VLILtplrna~~----~l~~y~~~L~~L~YP~~lIsLgfLv~d~~e~d~t~~~l~~~ 79 (269)
T PF03452_consen 22 RNKESVLILTPLRNAAS----FLPDYFDNLLSLTYPHELISLGFLVSDSSEFDNTLKILEAA 79 (269)
T ss_pred ccCCeEEEEEecCCchH----HHHHHHHHHHhCCCCchheEEEEEcCCCchhHHHHHHHHHH
Confidence 45689999999999655 79999999999999999999865555555 6777666544
No 83
>PF03071 GNT-I: GNT-I family; InterPro: IPR004139 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GNT-I, GLCNAC-T I) 2.4.1.101 from EC transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide. This is an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus, and is probably distributed in all tissues. The catalytic domain is located at the C terminus []. These proteins are members of the glycosyl transferase family 13 (GH13 from CAZY); GO: 0003827 alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0000139 Golgi membrane; PDB: 2APC_A 2AM4_A 1FO9_A 2AM3_A 1FOA_A 2AM5_A 1FO8_A.
Probab=92.73 E-value=0.67 Score=50.85 Aligned_cols=51 Identities=20% Similarity=0.103 Sum_probs=30.4
Q ss_pred CCCCCeEEEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHH
Q 007647 90 QELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFY 144 (595)
Q Consensus 90 ~~~P~V~V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~ 144 (595)
...|.+-|+|-+||-- +-+.+||.++++..=.++++.|+|+.||+.+.|.+
T Consensus 90 ~~~~~~pVlV~AcNRp----~yl~r~L~sLl~~rp~~~~fpIiVSQDg~~~~~~~ 140 (434)
T PF03071_consen 90 NKEPVIPVLVFACNRP----DYLRRTLDSLLKYRPSAEKFPIIVSQDGDDEEVAE 140 (434)
T ss_dssp -------EEEEESS-T----T-HHHHHHHHHHH-S-TTTS-EEEEE-TT-HHHHH
T ss_pred cCCCcceEEEEecCCc----HHHHHHHHHHHHcCCCCCCccEEEEecCCcHHHHH
Confidence 3467888999999933 37999999999877223688899999999886543
No 84
>TIGR02460 osmo_MPGsynth mannosyl-3-phosphoglycerate synthase. This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together mannosyl-3-phosphoglycerate phosphatase (MPGP) comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus, this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.
Probab=92.34 E-value=1.1 Score=47.51 Aligned_cols=45 Identities=20% Similarity=0.120 Sum_probs=33.3
Q ss_pred CCCChHHHHHHHHHhcCCCCCCCEEEEEcCCCCCCchHHHHHHHhhhc
Q 007647 223 PHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHL 270 (595)
Q Consensus 223 ~~~~KAgaLN~~l~~~~~~~~~d~vl~~DAD~~~~~pd~L~~~v~~f~ 270 (595)
-+.||+-.|=-|+-... ....+||.++|||.++ |.++.+-+.-|.
T Consensus 140 VR~GKgEGMiiG~lLAk-~~g~~YVGFiDaDNyi--PGaV~EYvk~yA 184 (381)
T TIGR02460 140 VRSGKGEGMLLGLLLAK-AIGAEYVGFVDADNYF--PGAVNEYVKIYA 184 (381)
T ss_pred eecCcchHHHHHHHHHH-HhCCceEeEeecccCC--CchHHHHHHHHH
Confidence 45689888877665322 3467999999999997 688887765553
No 85
>PRK14503 mannosyl-3-phosphoglycerate synthase; Provisional
Probab=90.95 E-value=1.4 Score=46.89 Aligned_cols=45 Identities=20% Similarity=0.134 Sum_probs=33.4
Q ss_pred CCCChHHHHHHHHHhcCCCCCCCEEEEEcCCCCCCchHHHHHHHhhhc
Q 007647 223 PHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHL 270 (595)
Q Consensus 223 ~~~~KAgaLN~~l~~~~~~~~~d~vl~~DAD~~~~~pd~L~~~v~~f~ 270 (595)
-+.||+-.|=-|+-... ....+||.++|||.++ |.++.+-+.-|.
T Consensus 141 VR~GKgEGMiiG~lLAk-~~g~~YVGFiDADNyi--PGaV~EYvk~yA 185 (393)
T PRK14503 141 VRSGKGEGMIIGLLLAK-ALGARYVGFVDADNYI--PGAVNEYVKIYA 185 (393)
T ss_pred eecCcchHHHHHHHHHH-HhCCCeEeEeecccCC--CchHHHHHHHHH
Confidence 45689888877665322 3467999999999998 688888776553
No 86
>PF09488 Osmo_MPGsynth: Mannosyl-3-phosphoglycerate synthase (osmo_MPGsynth); InterPro: IPR012812 This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together with mannosyl-3-phosphoglycerate phosphatase (MPGP), comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus (Rhodothermus obamensis), this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.; GO: 0050504 mannosyl-3-phosphoglycerate synthase activity, 0051479 mannosylglycerate biosynthetic process, 0005737 cytoplasm; PDB: 2WVM_A 2WVL_A 2WVK_A 2ZU7_B 2ZU9_B 2ZU8_A.
Probab=89.13 E-value=1.6 Score=46.41 Aligned_cols=44 Identities=18% Similarity=0.100 Sum_probs=29.6
Q ss_pred CCCChHHHHHHHHHhcCCCCCCCEEEEEcCCCCCCchHHHHHHHhhh
Q 007647 223 PHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLH 269 (595)
Q Consensus 223 ~~~~KAgaLN~~l~~~~~~~~~d~vl~~DAD~~~~~pd~L~~~v~~f 269 (595)
-+.||+-.|=-|+-... ....+||.++|||.++ |.++.+-+.-|
T Consensus 140 VR~GKgEGMiiGillAk-~~g~~YVGFvDADNyi--PGaV~EYvk~y 183 (381)
T PF09488_consen 140 VRNGKGEGMIIGILLAK-APGKRYVGFVDADNYI--PGAVNEYVKDY 183 (381)
T ss_dssp B-SSHHHHHHHHHHHHH-HTT-SEEEE--TTBS---HHHHHHHHHHH
T ss_pred eecCchHHHHHHHHHHH-hcCCceEeEeeccCCC--cchHHHHHHHH
Confidence 35689999888765332 3578999999999996 78888766544
No 87
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=88.54 E-value=3.2 Score=48.16 Aligned_cols=45 Identities=18% Similarity=0.110 Sum_probs=33.9
Q ss_pred CCCChHHHHHHHHHhcCCCCCCCEEEEEcCCCCCCchHHHHHHHhhhc
Q 007647 223 PHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHL 270 (595)
Q Consensus 223 ~~~~KAgaLN~~l~~~~~~~~~d~vl~~DAD~~~~~pd~L~~~v~~f~ 270 (595)
-+.||+-.|=-|+-... ....+||.++|||.++ |.++.+-+..|.
T Consensus 145 vr~gk~egm~~g~~la~-~~g~~yvgfidadny~--pg~v~ey~~~ya 189 (694)
T PRK14502 145 IRSGKAEGMILGIILTM-FSGRDYVGFIDTDNYI--PGAVWEYAKHFA 189 (694)
T ss_pred eecCcchHHHHHHHHHH-hcCCceEeEeeccCCC--CchHHHHHHHHH
Confidence 45689988887765322 4678999999999998 688887766554
No 88
>COG4092 Predicted glycosyltransferase involved in capsule biosynthesis [Cell envelope biogenesis, outer membrane]
Probab=87.78 E-value=10 Score=39.02 Aligned_cols=57 Identities=16% Similarity=0.290 Sum_probs=31.7
Q ss_pred CCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEEcCCCCCCchHHHHHHH
Q 007647 207 EIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAM 266 (595)
Q Consensus 207 ~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl~~DAD~~~~~pd~L~~~v 266 (595)
.+|++.|+.-.. |. +-..-+.--|+|...|-..-+.++|+++|+|+.. ..|-..+++
T Consensus 60 ~~~~~~yl~~~s-~~-~F~s~~~c~n~ga~Ysh~~~~Sn~vlFlDvDc~~-S~dnF~k~l 116 (346)
T COG4092 60 PMPRVLYLDFGS-PE-PFASETICANNGADYSHEKCESNLVLFLDVDCFG-SSDNFAKML 116 (346)
T ss_pred cccceEEEecCC-Cc-cccchhhhhhccchhhhccccccEEEEEeccccc-cHHHHHHHH
Confidence 357778876532 11 1111133345555432223468999999999998 544444444
No 89
>PF02364 Glucan_synthase: 1,3-beta-glucan synthase component ; InterPro: IPR003440 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This is the glycosyltransferase 48 family GT48 from CAZY, which consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase (2.4.1.34 from EC) also known as callose synthase catalyses the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall []. The reaction catalysed is:- UDP-glucose + {1,3-beta-D-glucosyl}(N) = UDP + {1,3-beta-D-glucosyl}(N+1).; GO: 0003843 1,3-beta-D-glucan synthase activity, 0006075 1,3-beta-D-glucan biosynthetic process, 0000148 1,3-beta-D-glucan synthase complex, 0016020 membrane
Probab=83.00 E-value=2.9 Score=49.20 Aligned_cols=75 Identities=20% Similarity=0.255 Sum_probs=54.5
Q ss_pred CccchHHHHHHHHhCCcEEEEeCCCCcceeccCCC-CHHHHHHHHHHhhhhhHHHHHhhcchhhhhccCCCCHHHHHHhH
Q 007647 404 ATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASP-SGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYL 482 (595)
Q Consensus 404 ~itED~~t~~~l~~~Gwr~~y~~~~~~~~~g~aP~-tl~~~~~Qr~RWa~G~~q~~~~~~~pl~~~~~~~l~~~qrl~y~ 482 (595)
.+.||+..|+...+||-++.|++- ...|..=+ .+.+-..=-.+-+.|+-+..+++.--.+. .+|.+..-+.+.
T Consensus 409 hLsEDIfaG~n~~lRGG~i~h~ey---~qcGKGRD~Gf~~I~~F~~KI~~G~GEQ~LSRe~yrLg---~~ld~~R~LSfy 482 (817)
T PF02364_consen 409 HLSEDIFAGMNATLRGGRIKHCEY---IQCGKGRDVGFNSILNFETKIASGMGEQMLSREYYRLG---TRLDFFRFLSFY 482 (817)
T ss_pred cccHHHHHHHHHHhcCCceeehhh---hhcccccccCchhhhhhHhHhcCCccchhhhHHHHHhh---ccCCHHHHHHHH
Confidence 799999999999999999999862 22354432 55555555678899999988876433443 788887777655
Q ss_pred Hh
Q 007647 483 WI 484 (595)
Q Consensus 483 ~~ 484 (595)
.+
T Consensus 483 y~ 484 (817)
T PF02364_consen 483 YA 484 (817)
T ss_pred hc
Confidence 43
No 90
>PF11316 Rhamno_transf: Putative rhamnosyl transferase ; InterPro: IPR021466 This bacterial family of proteins has no known function.
Probab=77.62 E-value=30 Score=35.03 Aligned_cols=56 Identities=16% Similarity=0.094 Sum_probs=37.3
Q ss_pred CCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEE--cCCCCCCchHHHHHHHhhhc
Q 007647 207 EIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNV--DCDMYANNPEIVLQAMCLHL 270 (595)
Q Consensus 207 ~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl~~--DAD~~~~~pd~L~~~v~~f~ 270 (595)
.+|+++.+.++. +....++..+++... ...+++++.+ |.|.-+ ..||++++-.+..
T Consensus 83 ~~p~~~i~~~~~------~~~~~~~~~~~~~~~-~~~~~~~~~~RLDdDDAl-~~dFV~rlr~~a~ 140 (234)
T PF11316_consen 83 DYPQFRIVFRPP------GPHRDAMRRAINAAR-RDGADPVLQFRLDDDDAL-HRDFVARLRRAAA 140 (234)
T ss_pred cCCCcEEEecCC------chHHHHHHHHHhhhc-cCCCCEEEEEEECCcchh-hHHHHHHHHHHHH
Confidence 356666766542 235567777764221 2456777766 998887 7999999887763
No 91
>PF06306 CgtA: Beta-1,4-N-acetylgalactosaminyltransferase (CgtA); InterPro: IPR010446 This family consists of several beta-1,4-N-acetylgalactosaminyltransferase proteins from Campylobacter jejuni [].
Probab=75.57 E-value=9.8 Score=40.06 Aligned_cols=106 Identities=18% Similarity=0.318 Sum_probs=65.8
Q ss_pred CeEEEEeccCCCCCChhHHHHHHHHHHh-cCCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhcccccCCccc
Q 007647 94 PVDMFVTTADAELEPPIITVNTVLSLLA-VDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFR 172 (595)
Q Consensus 94 ~V~V~IptynE~~Ep~~vv~~tl~s~l~-ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~r~~~~ 172 (595)
.++-+|-.-||+. .++.+|.|++- +| + .++.=..|+|.|.+.+. .||++|.--.+ ..
T Consensus 88 ~~~~~iRvKnE~~----tl~~si~S~Lpai~----~--gVI~yNdc~D~t~Eiil----------~fckkyP~fip--~~ 145 (347)
T PF06306_consen 88 NPWAFIRVKNEAM----TLAESIESILPAID----E--GVIGYNDCTDGTEEIIL----------EFCKKYPSFIP--IK 145 (347)
T ss_pred CcceEEEEcchhh----hHHHHHHHHHHHHh----c--cEEEeecCCCCHHHHHH----------HHHHhCccccc--cc
Confidence 5677899999886 99999999983 33 2 34444445777766653 58999952111 11
Q ss_pred ccCCCCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEEcC
Q 007647 173 YFPDSEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDC 252 (595)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl~~DA 252 (595)
|-- +++.. ++....+.+..=-|+.+.. ..+.++++-+||
T Consensus 146 Ypy-------------------~v~~~-------------------n~~~~~n~l~~YYNy~ls~---ipk~~w~iKID~ 184 (347)
T PF06306_consen 146 YPY-------------------EVIIK-------------------NPKSEENSLYNYYNYVLSF---IPKNEWAIKIDA 184 (347)
T ss_pred Ccc-------------------hhhcc-------------------CCchhhhhhhhhhhhhhcc---cccceEEEEecc
Confidence 100 01110 1111234566667777773 468999999999
Q ss_pred CCCCCchHHHH
Q 007647 253 DMYANNPEIVL 263 (595)
Q Consensus 253 D~~~~~pd~L~ 263 (595)
|++- +++-|-
T Consensus 185 DhIy-~~~KL~ 194 (347)
T PF06306_consen 185 DHIY-DTKKLY 194 (347)
T ss_pred ceee-cHHHHh
Confidence 9997 777663
No 92
>PF05679 CHGN: Chondroitin N-acetylgalactosaminyltransferase; InterPro: IPR008428 This family represents Chondroitin N-acetylgalactosaminyltransferase. Proteins have a type II transmembrane topology. The enzyme is involved in the biosynthetic initiation and elongation of chondroitin sulphate and is the key enzyme responsible for the selective chain assembly of chondroitin/dermatan sulphate on the linkage region tetrasaccharide common to various proteoglycans containing chondroitin/dermatan sulphate or heparin/heparan sulphate chains. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0032580 Golgi cisterna membrane
Probab=73.31 E-value=30 Score=39.03 Aligned_cols=49 Identities=14% Similarity=0.263 Sum_probs=38.8
Q ss_pred cEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEEcCCCCCCchHHHHHHH
Q 007647 210 HLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAM 266 (595)
Q Consensus 210 ~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl~~DAD~~~~~pd~L~~~v 266 (595)
++.+|.... ..-.++.+|+.|++. ....+++++.|.|+.+ .+++|.++=
T Consensus 315 ~i~~i~~~~----~~fsr~~~Ld~g~~~---~~~d~L~f~~Dvd~~f-~~~fL~rcR 363 (499)
T PF05679_consen 315 RIKWISVKT----GEFSRGAALDVGAKK---FPPDSLLFFCDVDMVF-TSDFLNRCR 363 (499)
T ss_pred ceEEEEecC----CCccHHHHHHhhccc---CCCCcEEEEEeCCccc-CHHHHHHHH
Confidence 567777642 235689999999985 4567899999999999 699998864
No 93
>PF01644 Chitin_synth_1: Chitin synthase; InterPro: IPR004834 This region is found commonly in chitin synthases classes I, II and III 2.4.1.16 from EC. Chitin a linear homopolymer of GlcNAc residues, it is an important component of the cell wall of fungi and is synthesised on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases []. ; GO: 0004100 chitin synthase activity, 0006031 chitin biosynthetic process
Probab=71.28 E-value=87 Score=29.99 Aligned_cols=53 Identities=8% Similarity=0.054 Sum_probs=34.2
Q ss_pred cEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEEcCCCCCCchHHHHHHHhh
Q 007647 210 HLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCL 268 (595)
Q Consensus 210 ~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl~~DAD~~~~~pd~L~~~v~~ 268 (595)
.+.+.-.|++ .+|-..-.-....-+.+-+.++++.+||.+.| .+++|-++...
T Consensus 110 Q~ifclKe~N-----~kKinSHrWfFnaf~~~l~P~vcvllDvGT~P-~~~siy~Lwka 162 (163)
T PF01644_consen 110 QIIFCLKEKN-----AKKINSHRWFFNAFCRQLQPNVCVLLDVGTKP-GKDSIYHLWKA 162 (163)
T ss_pred EEEEEecccc-----ccccchhhHHHHHHHhhcCCcEEEEEecCCCc-CchHHHHHHhh
Confidence 3444455543 45644333333333336789999999999995 89999887644
No 94
>KOG4179 consensus Lysyl hydrolase/glycosyltransferase family 25 [Posttranslational modification, protein turnover, chaperones]
Probab=71.12 E-value=6.1 Score=42.74 Aligned_cols=38 Identities=24% Similarity=0.170 Sum_probs=30.3
Q ss_pred ChHHHHHHHHHhcCCCCCCCEEEEEcCCCCCCchHHHHHHHhh
Q 007647 226 YKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCL 268 (595)
Q Consensus 226 ~KAgaLN~~l~~~~~~~~~d~vl~~DAD~~~~~pd~L~~~v~~ 268 (595)
-|-.|+|.|=. .-+||+++.|+|..+.++|.|.-.|..
T Consensus 97 lKeea~~~~r~-----~~adyilf~d~d~lLts~dTl~llm~l 134 (568)
T KOG4179|consen 97 LKEEALNWARS-----GWADYILFKDEDNLLTSGDTLPLLMNL 134 (568)
T ss_pred HHHHHHHHHHh-----hhcceeEEeehhheeeCCchHhHHHhc
Confidence 36778888754 457999999999999999998766643
No 95
>PRK09382 ispDF bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein; Provisional
Probab=64.44 E-value=80 Score=34.38 Aligned_cols=39 Identities=8% Similarity=0.038 Sum_probs=29.2
Q ss_pred hHHHHHHHHHhcCCCCCCCEEEEEcCCCCCCchHHHHHHHhhh
Q 007647 227 KAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLH 269 (595)
Q Consensus 227 KAgaLN~~l~~~~~~~~~d~vl~~DAD~~~~~pd~L~~~v~~f 269 (595)
....+-+|++. .+.|+|++.|||+=.-+++.+++++..+
T Consensus 83 r~~SV~~gL~~----l~~d~VLVhdadrPfv~~e~I~~li~~~ 121 (378)
T PRK09382 83 RQESVRNALEA----LDSEYVLIHDAARPFVPKELIDRLIEAL 121 (378)
T ss_pred HHHHHHHHHHh----cCCCeEEEeeccccCCCHHHHHHHHHHh
Confidence 45677788873 3459999999996433689998888765
No 96
>cd04182 GT_2_like_f GT_2_like_f is a subfamily of the glycosyltransferase family 2 (GT-2) with unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=63.24 E-value=76 Score=29.60 Aligned_cols=44 Identities=9% Similarity=-0.023 Sum_probs=33.6
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEEcCCC-CCCchHHHHHHHhhhc
Q 007647 224 HHYKAGAMNVLTRVSGLMTNAPFMLNVDCDM-YANNPEIVLQAMCLHL 270 (595)
Q Consensus 224 ~~~KAgaLN~~l~~~~~~~~~d~vl~~DAD~-~~~~pd~L~~~v~~f~ 270 (595)
..|-+.++..|++... .+.|.+++++||+ .+ +++.+++++..+.
T Consensus 73 ~~G~~~~i~~al~~~~--~~~~~vlv~~~D~P~i-~~~~i~~l~~~~~ 117 (186)
T cd04182 73 EEGMSSSLAAGLEALP--ADADAVLILLADQPLV-TAETLRALIDAFR 117 (186)
T ss_pred hhCHHHHHHHHHHhcc--ccCCEEEEEeCCCCCC-CHHHHHHHHHHHH
Confidence 3578888999998532 1479999999999 44 6899988887663
No 97
>cd02540 GT2_GlmU_N_bac N-terminal domain of bacterial GlmU. The N-terminal domain of N-Acetylglucosamine-1-phosphate uridyltransferase (GlmU). GlmU is an essential bacterial enzyme with both an acetyltransferase and an uridyltransferase activity which have been mapped to the C-terminal and N-terminal domains, respectively. This family represents the N-terminal uridyltransferase. GlmU performs the last two steps in the synthesis of UDP-N-acetylglucosamine (UDP-GlcNAc), which is an essential precursor in both the peptidoglycan and the lipopolysaccharide metabolic pathways in Gram-positive and Gram-negative bacteria, respectively.
Probab=62.43 E-value=69 Score=31.25 Aligned_cols=43 Identities=14% Similarity=0.009 Sum_probs=32.9
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEEcCCC-CCCchHHHHHHHhhhc
Q 007647 225 HYKAGAMNVLTRVSGLMTNAPFMLNVDCDM-YANNPEIVLQAMCLHL 270 (595)
Q Consensus 225 ~~KAgaLN~~l~~~~~~~~~d~vl~~DAD~-~~~~pd~L~~~v~~f~ 270 (595)
.|.++++-+++.... .+.+.+++++||+ .+ +++.+.+++..+.
T Consensus 73 ~g~~~ai~~a~~~~~--~~~~~vli~~~D~p~~-~~~~i~~l~~~~~ 116 (229)
T cd02540 73 LGTGHAVKQALPALK--DFEGDVLVLYGDVPLI-TPETLQRLLEAHR 116 (229)
T ss_pred CCCHHHHHHHHHhhc--cCCCeEEEEeCCcccc-CHHHHHHHHHHHH
Confidence 578999999988421 1268899999999 44 5788888887764
No 98
>PF02709 Glyco_transf_7C: N-terminal domain of galactosyltransferase; InterPro: IPR003859 This is a family of galactosyltransferases from a wide range of metazoa with three related galactosyltransferase activities; all three of which are possessed by one sequence in some cases. The three functions are N-acetyllactosamine synthase (2.4.1.90 from EC); beta-N-acetylglucosaminyl-glycopeptide beta-1,4-galactosyltransferase (2.4.1.38 from EC); and lactose synthase (2.4.1.22 from EC). Note that N-acetyllactosamine synthase is a component of lactose synthase along with alpha-lactalbumin, in the absence of alpha-lactalbumin N-acetyllactosamine synthase is used.; GO: 0016757 transferase activity, transferring glycosyl groups, 0005975 carbohydrate metabolic process; PDB: 2AGD_B 3EE5_A 2AE7_B 2AEC_A 2FYA_A 2AES_B 2AH9_A 2FYB_A 2FY7_A 3LW6_A ....
Probab=62.10 E-value=7.8 Score=32.29 Aligned_cols=43 Identities=14% Similarity=-0.015 Sum_probs=27.4
Q ss_pred CCchhhhHHHHhHhhccccccCCCcCccccCCCCCc---cchHHHHHHHHhCCcEEEEeC
Q 007647 370 SSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGAT---AEDNLTGLVIHSKGWRSGYCL 426 (595)
Q Consensus 370 ~~~~~~~~~~~~~vg~c~ye~~~~w~~~~G~~~~~i---tED~~t~~~l~~~Gwr~~y~~ 426 (595)
|++.....+...+|| ||++.-. -||.++..|+...|.++...+
T Consensus 21 Gg~~~~~~~~f~~vn--------------Gfde~f~gWG~ED~Dl~~Rl~~~g~~~~~~~ 66 (78)
T PF02709_consen 21 GGVFAISREDFEKVN--------------GFDERFWGWGGEDDDLYNRLWKAGLKIVRVP 66 (78)
T ss_dssp -SEEEEEHHHHHHTT--------------SS-SS-TSCSSHHHHHHHHHHHTT---B-SS
T ss_pred EEEEEEeHHHHHHcC--------------CCCccccccCccHHHHHHHHHHcCCeEEecC
Confidence 445555667888998 5554433 399999999999999877754
No 99
>TIGR03310 matur_ygfJ molybdenum hydroxylase accessory protein, YgfJ family. Members of this protein family are probable accessory proteins for the biosynthesis of enzymes related to xanthine dehydrogenase. Comparative genomics suggests a role in the maturation of selenium-dependent molybdenum hydroxylases, although a tenuous alternative hypothesis is a role for this protein (with a requirement for SelD, the selenium donor protein in the selenocysteine and selenouridine biosynthesis pathways) metabolizing a selenium-containing substrate such as selenate.
Probab=61.82 E-value=65 Score=30.34 Aligned_cols=43 Identities=9% Similarity=-0.005 Sum_probs=31.6
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEEcCCCCCCchHHHHHHHhhhc
Q 007647 225 HYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHL 270 (595)
Q Consensus 225 ~~KAgaLN~~l~~~~~~~~~d~vl~~DAD~~~~~pd~L~~~v~~f~ 270 (595)
.|-++++-.|++. ..+.+.+++++||+-.-+++.+++++..+.
T Consensus 74 ~g~~~si~~~l~~---~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~ 116 (188)
T TIGR03310 74 EGQSSSIKLGLEL---PVQSDGYLFLLGDQPFVTPDIIQLLLEAFA 116 (188)
T ss_pred cCHHHHHHHHhcC---CCCCCEEEEEeCCcCCCCHHHHHHHHHHHH
Confidence 4567777777762 245789999999993226899999887664
No 100
>TIGR03584 PseF pseudaminic acid CMP-transferase. The sequences in this family include the pfam02348 (cytidyltransferase) domain and are homologous to the NeuA protein responsible for the transfer of CMP to neuraminic acid. According to, this gene is responsible for the transfer of CMP to the structurally related sugar, pseudaminic acid which is observed as a component of sugar modifications of flagellin in Campylobacter species. This gene is commonly observed in apparent operons with other genes responsible for the biosynthesis of pseudaminic acid and as a component of flagellar and exopolysaccharide biosynthesis loci.
Probab=57.39 E-value=1e+02 Score=30.69 Aligned_cols=58 Identities=10% Similarity=-0.050 Sum_probs=39.3
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEEcCCCCCCchHHHHHHHhhhcCCCCCCcEEEEe
Q 007647 225 HYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQ 282 (595)
Q Consensus 225 ~~KAgaLN~~l~~~~~~~~~d~vl~~DAD~~~~~pd~L~~~v~~f~d~~~d~~vg~VQ 282 (595)
.+...++.+++.......+.|+|+++++|+=+-+++.+.+++..|.+...|.-+.++.
T Consensus 76 ~~~~~si~~~l~~l~~~~~~d~v~~l~~tsPl~~~~~I~~~i~~~~~~~~ds~~sv~~ 133 (222)
T TIGR03584 76 TGTAPVVKHAIEELKLQKQYDHACCIYATAPFLQAKILKEAFELLKQPNAHFVFSVTS 133 (222)
T ss_pred CCchHHHHHHHHHHhhcCCCCEEEEecCCCCcCCHHHHHHHHHHHHhCCCCEEEEeec
Confidence 4566778887774210134799999999987778999999998886422233344443
No 101
>PF13896 Glyco_transf_49: Glycosyl-transferase for dystroglycan
Probab=55.31 E-value=14 Score=39.13 Aligned_cols=46 Identities=15% Similarity=0.292 Sum_probs=33.0
Q ss_pred HHHHHHhcCCCCCCCEEEEEcCCCCCCchHHHHHHHhhhcCCCCCCcEEEE
Q 007647 231 MNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFI 281 (595)
Q Consensus 231 LN~~l~~~~~~~~~d~vl~~DAD~~~~~pd~L~~~v~~f~d~~~d~~vg~V 281 (595)
-|.|+. .+..++|+++|+|+++ .+++-..+...........+.++|
T Consensus 119 RNvAr~----~a~T~~v~~~DvD~~p-s~~l~~~l~~~~~~~~~~~~~a~V 164 (317)
T PF13896_consen 119 RNVARS----GARTDYVFLLDVDFLP-SPGLYEKLLRFARRNIDKSKTAFV 164 (317)
T ss_pred HHHHHH----hcCcceEEEecceeee-CcchHHHHHHHhhhhccCCceEEE
Confidence 466777 6899999999999995 788776666554322245666766
No 102
>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis. The catalytic domain of LARGE is a putative glycosyltransferase. Mutations of LARGE in mouse and human cause dystroglycanopathies, a disease associated with hypoglycosylation of the membrane protein alpha-dystroglycan (alpha-DG) and consequent loss of extracellular ligand binding. LARGE needs to both physically interact with alpha-dystroglycan and function as a glycosyltransferase in order to stimulate alpha-dystroglycan hyperglycosylation. LARGE localizes to the Golgi apparatus and contains three conserved DxD motifs. While two of the motifs are indispensible for glycosylation function, one is important for localization of th eenzyme. LARGE was originally named because it covers approximately large trunck of genomic DNA, more than 600bp long. The predicted protein structure contains an N-terminal cytoplasmic domain, a transmembrane region, a coiled-coil
Probab=52.31 E-value=1.4e+02 Score=30.96 Aligned_cols=47 Identities=17% Similarity=0.067 Sum_probs=31.2
Q ss_pred CeEEEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHH
Q 007647 94 PVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSL 146 (595)
Q Consensus 94 ~V~V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l 146 (595)
+|+|+.+..| =...+..++.|++.- ....++++|++|+-+....+.+
T Consensus 2 ~~~iv~~~~~----y~~~~~~~i~Sil~n--~~~~~~fhii~d~~s~~~~~~l 48 (280)
T cd06431 2 HVAIVCAGYN----ASRDVVTLVKSVLFY--RRNPLHFHLITDEIARRILATL 48 (280)
T ss_pred EEEEEEccCC----cHHHHHHHHHHHHHc--CCCCEEEEEEECCcCHHHHHHH
Confidence 3666666633 123677888898754 3446999999998877654444
No 103
>TIGR01173 glmU UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase. This protein is a bifunctional enzyme, GlmU, which catalyzes last two reactions in the four-step pathway of UDP-N-acetylglucosamine biosynthesis from fructose-6-phosphate. Its reaction product is required from peptidoglycan biosynthesis, LPS biosynthesis in species with LPS, and certain other processes.
Probab=47.95 E-value=1.4e+02 Score=32.67 Aligned_cols=42 Identities=12% Similarity=0.003 Sum_probs=32.0
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEEcCCC-CCCchHHHHHHHhhhc
Q 007647 225 HYKAGAMNVLTRVSGLMTNAPFMLNVDCDM-YANNPEIVLQAMCLHL 270 (595)
Q Consensus 225 ~~KAgaLN~~l~~~~~~~~~d~vl~~DAD~-~~~~pd~L~~~v~~f~ 270 (595)
.|-++++-.++.. ..+.|.++++++|+ .. +++.+.+++..+.
T Consensus 75 ~G~~~ai~~a~~~---l~~~~~~lv~~~D~p~i-~~~~~~~l~~~~~ 117 (451)
T TIGR01173 75 LGTGHAVLQALPF---LPDDGDVLVLYGDVPLI-SAETLERLLEAHR 117 (451)
T ss_pred CchHHHHHHHHHh---cCCCCcEEEEECCcCCc-CHHHHHHHHHHHh
Confidence 4678888888884 23457899999998 55 6888988887663
No 104
>KOG1413 consensus N-acetylglucosaminyltransferase I [Carbohydrate transport and metabolism]
Probab=43.30 E-value=94 Score=33.42 Aligned_cols=48 Identities=21% Similarity=0.144 Sum_probs=38.2
Q ss_pred CCCeEEEEeccCCCCCChhHHHHHHHHHHhcCCCC-CCeEEEEEeCCCCcchHH
Q 007647 92 LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPV-HKLACYVSDDACSPLNFY 144 (595)
Q Consensus 92 ~P~V~V~IptynE~~Ep~~vv~~tl~s~l~ldYP~-~kl~V~v~DDg~~d~T~~ 144 (595)
.|.+.|+|=+||- ++.|++++..++.+. |. +++-|+|+-|++...+-.
T Consensus 66 ~~v~pvvVf~csR----~~~lr~~v~kll~yr-PsaekfpiiVSQD~~~e~vk~ 114 (411)
T KOG1413|consen 66 PPVIPVVVFACSR----ADALRRHVKKLLEYR-PSAEKFPIIVSQDCEKEAVKK 114 (411)
T ss_pred CCceeEEEEecCc----HHHHHHHHHHHHHhC-cchhhcCEEEeccCCcHHHHH
Confidence 4566788888883 348999999999988 64 699999999999885443
No 105
>cd06432 GT8_HUGT1_C_like The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family. C-terminal domain of glycoprotein glucosyltransferase (UGT). UGT is a large glycoprotein whose C-terminus contains the catalytic activity. This catalytic C-terminal domain is highly homologous to Glycosyltransferase Family 8 (GT 8) and contains the DXD motif that coordinates donor sugar binding, characteristic for Family 8 glycosyltransferases. GT 8 proteins are retaining enzymes based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. The non-catalytic N-terminal portion of the human UTG1 (HUGT1) has been shown to monitor the protein folding status and activate its glucosyltransferase activity.
Probab=43.21 E-value=2.3e+02 Score=28.80 Aligned_cols=36 Identities=17% Similarity=0.054 Sum_probs=25.8
Q ss_pred HHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHH
Q 007647 111 ITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVE 148 (595)
Q Consensus 111 vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e 148 (595)
-+.-++.|++.-+ ...+++||++|+-+++..+.+.+
T Consensus 15 ~~~v~l~Sll~nn--~~~~~fyil~~~is~e~~~~l~~ 50 (248)
T cd06432 15 FLRIMMLSVMKNT--KSPVKFWFIKNFLSPQFKEFLPE 50 (248)
T ss_pred HHHHHHHHHHHcC--CCCEEEEEEeCCCCHHHHHHHHH
Confidence 4667777877644 24799999999988865555543
No 106
>PF02434 Fringe: Fringe-like; InterPro: IPR003378 The Notch receptor is a large, cell surface transmembrane protein involved in a wide variety of developmental processes in higher organisms []. It becomes activated when its extracellular region binds to ligands located on adjacent cells. Much of this extracellular region is composed of EGF-like repeats, many of which can be O-fucosylated. A number of these O-fucosylated repeats can in turn be further modified by the action of a beta-1,3-N-acetylglucosaminyltransferase enzyme known as Fringe []. Fringe potentiates the activation of Notch by Delta ligands, while inhibiting activation by Serrate/Jagged ligands. This regulation of Notch signalling by Fringe is important in many processes []. Four distinct Fringe proteins have so far been studied in detail; Drosophila Fringe (Dfng) and its three mammalian homologues Lunatic Fringe (Lfng), Radical Fringe (Rfng) and Manic Fringe (Mfng). Dfng, Lfng and Rfng have all been shown to play important roles in developmental processes within their host, though the phenotype of mutants can vary between species e.g. Rfng mutants are retarded in wing development in chickens, but have no obvious phenotype in mice [, , ]. Mfng mutants have not, so far, been charcterised. Biochemical studies indicate that the Fringe proteins are fucose-specific transferases requiring manganese for activity and utilising UDP-N-acetylglucosamine as a donor substrate []. The three mammalian proteins show distinct variations in their catalytic efficiencies with different substrates. Dfng is a glucosaminyltransferase that controls the response of the Notch receptor to specific ligands which is localised to the Golgi apparatus [] (not secreted as previously thought). Modification of Notch occurs through glycosylation by Dfng. This entry consists of Fringe proteins and related glycosyltransferase enzymes including: Beta-1,3-glucosyltransferase, which glucosylates O-linked fucosylglycan on thrombospondin type 1 repeat domains []. Core 1 beta1,3-galactosyltransferase 1, generates the core T antigen, which is a precursor for many extended O-glycans in glycoproteins and plays a central role in many processes, such as angiogenesis, thrombopoiesis and kidney homeostasis development []. ; GO: 0016757 transferase activity, transferring glycosyl groups, 0016020 membrane; PDB: 2J0B_A 2J0A_A.
Probab=41.17 E-value=1.4e+02 Score=30.42 Aligned_cols=27 Identities=19% Similarity=0.225 Sum_probs=22.7
Q ss_pred CCCCEEEEEcCCCCCCchHHHHHHHhhh
Q 007647 242 TNAPFMLNVDCDMYANNPEIVLQAMCLH 269 (595)
Q Consensus 242 ~~~d~vl~~DAD~~~~~pd~L~~~v~~f 269 (595)
++.+.++.+|-|+++ ..+-|++.+.-+
T Consensus 85 ~~~~Wf~~~DDDtyv-~~~~L~~~L~~~ 111 (252)
T PF02434_consen 85 SDKDWFCFADDDTYV-NVENLRRLLSKY 111 (252)
T ss_dssp HT-SEEEEEETTEEE--HHHHHHHHTTS
T ss_pred CCceEEEEEeCCcee-cHHHHHHHHhhC
Confidence 577999999999999 799999988876
No 107
>cd04181 NTP_transferase NTP_transferases catalyze the transfer of nucleotides onto phosphosugars. Nucleotidyltransferases transfer nucleotides onto phosphosugars. The enzyme family includes Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase. The products are activated sugars that are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides.
Probab=39.36 E-value=2.3e+02 Score=27.04 Aligned_cols=40 Identities=18% Similarity=0.181 Sum_probs=30.1
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEEcCCCCCCchHHHHHHHhhhc
Q 007647 225 HYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHL 270 (595)
Q Consensus 225 ~~KAgaLN~~l~~~~~~~~~d~vl~~DAD~~~~~pd~L~~~v~~f~ 270 (595)
.|-++++-.++.. .+.+.+++++||++. +.|. .+++.++.
T Consensus 81 ~g~~~al~~~~~~----~~~~~~lv~~~D~~~-~~~~-~~~~~~~~ 120 (217)
T cd04181 81 LGTAGAVRNAEDF----LGDDDFLVVNGDVLT-DLDL-SELLRFHR 120 (217)
T ss_pred CccHHHHHHhhhh----cCCCCEEEEECCeec-CcCH-HHHHHHHH
Confidence 5778999999883 367889999999997 6664 45665553
No 108
>PF05045 RgpF: Rhamnan synthesis protein F; InterPro: IPR007739 This family consists of a group of proteins which are related to the Streptococcal rhamnose-glucose polysaccharide assembly protein (RgpF). Rhamnan backbones are found in several O-polysaccharides found in phytopathogenic bacteria and are regarded as pathogenic factors [].
Probab=38.35 E-value=4.3e+02 Score=29.89 Aligned_cols=26 Identities=8% Similarity=0.125 Sum_probs=20.6
Q ss_pred CchHHHHHHHhhhcCCCCCCcEEEEeCCc
Q 007647 257 NNPEIVLQAMCLHLGSKNENEFAFIQSPQ 285 (595)
Q Consensus 257 ~~pd~L~~~v~~f~d~~~d~~vg~VQ~pq 285 (595)
.+++.+.+++..|. .+|++|+|-.+.
T Consensus 381 ~s~~~v~~Il~~F~---~~p~lGlv~P~~ 406 (498)
T PF05045_consen 381 GSKEYVDNILSAFE---DDPRLGLVIPDI 406 (498)
T ss_pred CCHHHHHHHHHHHh---hCCCceEEeCCc
Confidence 35788889999886 689999996544
No 109
>PRK15171 lipopolysaccharide 1,3-galactosyltransferase; Provisional
Probab=37.27 E-value=4.9e+02 Score=27.70 Aligned_cols=52 Identities=15% Similarity=0.040 Sum_probs=34.1
Q ss_pred CCeEEEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHH
Q 007647 93 PPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVE 148 (595)
Q Consensus 93 P~V~V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e 148 (595)
..+.|+.++=+ .=..-+.-+|.|++.-+ |...+.++|++|+-++...+.+.+
T Consensus 24 ~~i~Iv~~~D~---ny~~~~~vsi~Sil~nn-~~~~~~f~Il~~~is~e~~~~l~~ 75 (334)
T PRK15171 24 NSLDIAYGIDK---NFLFGCGVSIASVLLNN-PDKSLVFHVFTDYISDADKQRFSA 75 (334)
T ss_pred CceeEEEECcH---hhHHHHHHHHHHHHHhC-CCCCEEEEEEeCCCCHHHHHHHHH
Confidence 56777766533 33345666777776443 444799999999988876555543
No 110
>PF04724 Glyco_transf_17: Glycosyltransferase family 17; InterPro: IPR006813 This family represents beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase (2.4.1.144 from EC). This enzyme transfers the bisecting GlcNAc to the core mannose of complex N-glycans. The addition of this residue is regulated during development and has functional consequences for receptor signalling, cell adhesion, and tumour progression [, ].; GO: 0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0016020 membrane
Probab=36.15 E-value=71 Score=34.51 Aligned_cols=35 Identities=26% Similarity=0.432 Sum_probs=25.7
Q ss_pred HHHHHHHHhcCCCCCCCEEEEEcCCCCCCchHHHHHH
Q 007647 229 GAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQA 265 (595)
Q Consensus 229 gaLN~~l~~~~~~~~~d~vl~~DAD~~~~~pd~L~~~ 265 (595)
.+|+..++..+ ...+|+|++-|+|.++ +|+.|+.+
T Consensus 165 ~~l~~l~~~~~-~~~dDliivSDvDEIP-~p~~l~~L 199 (356)
T PF04724_consen 165 NALNGLLRLAG-IQDDDLIIVSDVDEIP-SPETLKFL 199 (356)
T ss_pred HHHHHHhhhcC-CCCCCEEEEcCccccc-CHHHHHHH
Confidence 34544444445 5789999999999996 89998654
No 111
>PRK13385 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Provisional
Probab=33.45 E-value=4.8e+02 Score=25.66 Aligned_cols=41 Identities=10% Similarity=-0.046 Sum_probs=31.5
Q ss_pred hHHHHHHHHHhcCCCCCCCEEEEEcCCCCCCchHHHHHHHhhhc
Q 007647 227 KAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHL 270 (595)
Q Consensus 227 KAgaLN~~l~~~~~~~~~d~vl~~DAD~~~~~pd~L~~~v~~f~ 270 (595)
....+-.|++. ..+.+++++.|||+=.-+++.+++++..+.
T Consensus 84 r~~sv~~gl~~---~~~~d~vli~~~d~P~i~~~~i~~li~~~~ 124 (230)
T PRK13385 84 RQESVAAGLDR---IGNEDVILVHDGARPFLTQDIIDRLLEGVA 124 (230)
T ss_pred HHHHHHHHHHh---ccCCCeEEEccCCCCCCCHHHHHHHHHHHh
Confidence 34677777774 234689999999986668999999988774
No 112
>cd02516 CDP-ME_synthetase CDP-ME synthetase is involved in mevalonate-independent isoprenoid production. 4-diphosphocytidyl-2-methyl-D-erythritol synthase (CDP-ME), also called 2C-methyl-d-erythritol 4-phosphate cytidylyltransferase catalyzes the third step in the alternative (non-mevalonate) pathway of Isopentenyl diphosphate (IPP) biosynthesis: the formation of 4-diphosphocytidyl-2C-methyl-D-erythritol from CTP and 2C-methyl-D-erythritol 4-phosphate. This mevalonate independent pathway that utilizes pyruvate and glyceraldehydes 3-phosphate as starting materials for production of IPP occurs in a variety of bacteria, archaea and plant cells, but is absent in mammals. Thus, CDP-ME synthetase is an attractive targets for the structure-based design of selective antibacterial, herbicidal and antimalarial drugs.
Probab=31.14 E-value=4.1e+02 Score=25.52 Aligned_cols=43 Identities=9% Similarity=-0.006 Sum_probs=32.7
Q ss_pred ChHHHHHHHHHhcCCCCCCCEEEEEcCCCCCCchHHHHHHHhhh
Q 007647 226 YKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLH 269 (595)
Q Consensus 226 ~KAgaLN~~l~~~~~~~~~d~vl~~DAD~~~~~pd~L~~~v~~f 269 (595)
+...++..|++... ..+.+.+++.|||+=.-+++.+++++..+
T Consensus 79 ~~~~si~~al~~~~-~~~~~~vlv~~~D~P~i~~~~i~~li~~~ 121 (218)
T cd02516 79 TRQDSVLNGLKALP-DADPDIVLIHDAARPFVSPELIDRLIDAL 121 (218)
T ss_pred HHHHHHHHHHHhcc-cCCCCEEEEccCcCCCCCHHHHHHHHHHH
Confidence 46778888888411 02678999999997544799999999876
No 113
>TIGR02665 molyb_mobA molybdopterin-guanine dinucleotide biosynthesis protein A, proteobacterial. In many molybdopterin-containing enzymes, including nitrate reductase and dimethylsulfoxide reductase, the cofactor is molybdopterin-guanine dinucleotide. The family described here contains MobA, molybdopterin-guanine dinucleotide biosynthesis protein A, from the Proteobacteria only. MobA can reconstitute molybdopterin-guanine dinucleotide biosynthesis without the product of the neighboring gene MobB. The probable MobA proteins of other lineages differ sufficiently that they are not included in scope of this family.
Probab=30.76 E-value=1.8e+02 Score=27.43 Aligned_cols=41 Identities=15% Similarity=0.214 Sum_probs=33.4
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEEcCCC-CCCchHHHHHHHhhh
Q 007647 224 HHYKAGAMNVLTRVSGLMTNAPFMLNVDCDM-YANNPEIVLQAMCLH 269 (595)
Q Consensus 224 ~~~KAgaLN~~l~~~~~~~~~d~vl~~DAD~-~~~~pd~L~~~v~~f 269 (595)
..|-.+++-.|++. .+.|.+++++||+ .+ +++.+++++..+
T Consensus 72 ~~g~~~si~~al~~----~~~~~vlv~~~D~P~i-~~~~i~~l~~~~ 113 (186)
T TIGR02665 72 FPGPLAGILAGLRW----AGTDWVLTVPCDTPFL-PEDLVARLAAAL 113 (186)
T ss_pred CCCCHHHHHHHHHh----cCCCeEEEEecCCCcC-CHHHHHHHHHHh
Confidence 35778888888883 4678999999998 55 799999988776
No 114
>KOG0916 consensus 1,3-beta-glucan synthase/callose synthase catalytic subunit [Cell wall/membrane/envelope biogenesis]
Probab=29.89 E-value=55 Score=40.90 Aligned_cols=75 Identities=17% Similarity=0.111 Sum_probs=47.7
Q ss_pred CccchHHHHHHHHhCCcEEEEeCCCCcceeccCCC-CHHHHHHHHHHhhhhhHHHHHhhcchhhhhccCCCCHHHHHHhH
Q 007647 404 ATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASP-SGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYL 482 (595)
Q Consensus 404 ~itED~~t~~~l~~~Gwr~~y~~~~~~~~~g~aP~-tl~~~~~Qr~RWa~G~~q~~~~~~~pl~~~~~~~l~~~qrl~y~ 482 (595)
.+.||+.-|+.-..+|-++.+++- ...|..-+ .+.+-..=-..-+.|+-|..+++.--.+. .++.+..-+.+.
T Consensus 1173 nlsEDIfAG~n~tlRgG~itH~EY---iQvGKGRDvGlnqI~~FeaKia~G~GEQ~LSRd~YrLG---~~ldffRmLSfy 1246 (1679)
T KOG0916|consen 1173 NLSEDIFAGFNATLRGGNITHHEY---IQVGKGRDVGLNQISNFEAKIANGNGEQTLSRDYYRLG---TQLDFFRMLSFY 1246 (1679)
T ss_pred ccchHhhhhhhHHhhCCCccccee---eecccccccCcchhhhhhhhhcCCCcchhhhHHHHHhc---ccccHHHHHHHH
Confidence 789999999999999999988852 11232211 23333333446788988888765322232 677776666554
Q ss_pred Hh
Q 007647 483 WI 484 (595)
Q Consensus 483 ~~ 484 (595)
.+
T Consensus 1247 ft 1248 (1679)
T KOG0916|consen 1247 FT 1248 (1679)
T ss_pred hc
Confidence 43
No 115
>cd06915 NTP_transferase_WcbM_like WcbM_like is a subfamily of nucleotidyl transferases. WcbM protein of Burkholderia mallei is involved in the biosynthesis, export or translocation of capsule. It is a subfamily of nucleotidyl transferases that transfer nucleotides onto phosphosugars.
Probab=29.61 E-value=4.3e+02 Score=25.18 Aligned_cols=42 Identities=14% Similarity=0.106 Sum_probs=30.2
Q ss_pred CCCChHHHHHHHHHhcCCCCCCCEEEEEcCCCCCCchHHHHHHHhhhc
Q 007647 223 PHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHL 270 (595)
Q Consensus 223 ~~~~KAgaLN~~l~~~~~~~~~d~vl~~DAD~~~~~pd~L~~~v~~f~ 270 (595)
...|-++++-.+++. .+.+.+++++||+.. +.+ +.+++..+.
T Consensus 79 ~~~G~~~~l~~a~~~----~~~~~~lv~~~D~~~-~~~-~~~~l~~~~ 120 (223)
T cd06915 79 EPLGTGGAIKNALPK----LPEDQFLVLNGDTYF-DVD-LLALLAALR 120 (223)
T ss_pred CCCcchHHHHHHHhh----cCCCCEEEEECCccc-CCC-HHHHHHHHH
Confidence 346788888888883 355778999999987 455 556666553
No 116
>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+.
Probab=29.44 E-value=4.3e+02 Score=26.39 Aligned_cols=35 Identities=20% Similarity=0.117 Sum_probs=24.5
Q ss_pred CCCEEEEEcCCCCCCchHHHHHHHhhhcCCCCCCcEEEEe
Q 007647 243 NAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQ 282 (595)
Q Consensus 243 ~~d~vl~~DAD~~~~~pd~L~~~v~~f~d~~~d~~vg~VQ 282 (595)
+.+=|+.+|||.++ . +-|.++.-..+ .+.-+|+|.
T Consensus 95 ~~~kvlYLD~D~iv-~-~di~~L~~~~l---~~~~~aav~ 129 (246)
T cd00505 95 DYDKILYVDADILV-L-TDIDELWDTPL---GGQELAAAP 129 (246)
T ss_pred ccCeEEEEcCCeee-c-cCHHHHhhccC---CCCeEEEcc
Confidence 68999999999997 3 45566554322 456777775
No 117
>PF09623 Cas_NE0113: CRISPR-associated protein NE0113 (Cas_NE0113); InterPro: IPR019092 Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR) are a family of DNA direct repeats separated by regularly sized non-repetitive spacer sequences that are found in most bacterial and archaeal genomes []. CRISPRs appear to provide acquired resistance against bacteriophages, possibly acting with an RNA interference-like mechanism to inhibit gene functions of invasive DNA elements [, ]. Differences in the number and type of spacers between CRISPR repeats correlate with phage sensitivity. It is thought that following phage infection, bacteria integrate new spacers derived from phage genomic sequences, and that the removal or addition of particular spacers modifies the phage-resistance phenotype of the cell. Therefore, the specificity of CRISPRs may be determined by spacer-phage sequence similarity. In addition, there are many protein families known as CRISPR-associated sequences (Cas), which are encoded in the vicinity of CRISPR loci []. CRISPR/cas gene regions can be quite large, with up to 20 different, tandem-arranged cas genes next to a CRISPR cluster or filling the region between two repeat clusters. Cas genes and CRISPRs are found on mobile genetic elements such as plasmids, and have undergone extensive horizontal transfer. Cas proteins are thought to be involved in the propagation and functioning of CRISPRs. Some Cas proteins show similarity to helicases and repair proteins, although the functions of most are unknown. Cas families can be divided into subtypes according to operon organisation and phylogeny. This entry represents a Cas protein family found in both bacteria and arachaea. The function of these proteins is unknown.
Probab=27.58 E-value=2.1e+02 Score=28.91 Aligned_cols=61 Identities=11% Similarity=0.134 Sum_probs=39.0
Q ss_pred EEEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhccc
Q 007647 96 DMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNV 165 (595)
Q Consensus 96 ~V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv 165 (595)
.|+|++-. ..|.+|-+|+.++.+..++.+ +|+|+ +|.+-. .......+...+..||++|+.
T Consensus 3 ~iLlatlG---~sPqVVTETL~aL~~~g~~p~--EV~vi---tT~~~~-~~~~~~ll~g~~~~l~~~y~~ 63 (224)
T PF09623_consen 3 NILLATLG---TSPQVVTETLYALAQQGEIPD--EVHVI---TTRDGA-VRAALRLLDGGLQRLCQDYYL 63 (224)
T ss_pred eEEEEecC---CCchHHHHHHHHHHcCCCCCC--EEEEE---ECCChH-HHHHHHHHHHHHHHHHHhhcC
Confidence 47899999 888999999999999888777 56666 222111 111111111124578998874
No 118
>PLN02917 CMP-KDO synthetase
Probab=27.05 E-value=6.6e+02 Score=26.15 Aligned_cols=43 Identities=14% Similarity=0.044 Sum_probs=30.5
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEEcCCCCCCchHHHHHHHhhhc
Q 007647 225 HYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHL 270 (595)
Q Consensus 225 ~~KAgaLN~~l~~~~~~~~~d~vl~~DAD~~~~~pd~L~~~v~~f~ 270 (595)
+|-+++ ..+++.. ..+.|+++++++|+=+-+++.|++++..+.
T Consensus 120 ~GT~~~-~~a~~~l--~~~~d~Vlil~gD~PlI~~~tI~~li~~~~ 162 (293)
T PLN02917 120 NGTERC-NEALKKL--EKKYDIVVNIQGDEPLIEPEIIDGVVKALQ 162 (293)
T ss_pred CchHHH-HHHHHhc--cCCCCEEEEecCCcCCCCHHHHHHHHHHHH
Confidence 344444 4566532 124789999999987558999999998774
No 119
>cd02509 GDP-M1P_Guanylyltransferase GDP-M1P_Guanylyltransferase catalyzes the formation of GDP-Mannose. GDP-mannose-1-phosphate guanylyltransferase, also called GDP-mannose pyrophosphorylase (GDP-MP), catalyzes the formation of GDP-Mannose from mannose-1-phosphate and GTP. Mannose is a key monosaccharide for glycosylation of proteins and lipids. GDP-Mannose is the activated donor for mannosylation of various biomolecules. This enzyme is known to be bifunctional, as both mannose-6-phosphate isomerase and mannose-1-phosphate guanylyltransferase. This CD covers the N-terminal GDP-mannose-1-phosphate guanylyltransferase domain, whereas the isomerase function is located at the C-terminal half. GDP-MP is a member of the nucleotidyltransferase family of enzymes.
Probab=26.16 E-value=4.3e+02 Score=27.01 Aligned_cols=43 Identities=16% Similarity=0.135 Sum_probs=27.5
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEEcCCCCCCchHHHHHHH
Q 007647 224 HHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAM 266 (595)
Q Consensus 224 ~~~KAgaLN~~l~~~~~~~~~d~vl~~DAD~~~~~pd~L~~~v 266 (595)
..+-|+|+-.++.......+.+.++++-+|+.+.+.+.+.+++
T Consensus 83 ~~gTa~ai~~a~~~~~~~~~~~~vlVl~~D~~i~~~~~f~~~l 125 (274)
T cd02509 83 GRNTAPAIALAALYLAKRDPDAVLLVLPSDHLIEDVEAFLKAV 125 (274)
T ss_pred CCCcHHHHHHHHHHHHhcCCCCeEEEecchhcccCHHHHHHHH
Confidence 3567888887766422122458999999999985434333444
No 120
>cd06422 NTP_transferase_like_1 NTP_transferase_like_1 is a member of the nucleotidyl transferase family. This is a subfamily of nucleotidyl transferases. Nucleotidyl transferases transfer nucleotides onto phosphosugars. The activated sugars are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides. Other subfamilies of nucleotidyl transferases include Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase.
Probab=26.03 E-value=3.7e+02 Score=26.04 Aligned_cols=39 Identities=15% Similarity=0.192 Sum_probs=28.4
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEEcCCCCCCchHHHHHHHhhh
Q 007647 225 HYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLH 269 (595)
Q Consensus 225 ~~KAgaLN~~l~~~~~~~~~d~vl~~DAD~~~~~pd~L~~~v~~f 269 (595)
.|-++++..++.. .+.+.++++.||++. +.|+.. ++...
T Consensus 82 ~g~~~~l~~~~~~----~~~~~~lv~~~D~i~-~~~~~~-~~~~~ 120 (221)
T cd06422 82 LETGGGIKKALPL----LGDEPFLVVNGDILW-DGDLAP-LLLLH 120 (221)
T ss_pred cccHHHHHHHHHh----cCCCCEEEEeCCeee-CCCHHH-HHHHH
Confidence 4678999999984 333778999999997 677654 45444
No 121
>PRK14357 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=25.65 E-value=5.2e+02 Score=28.25 Aligned_cols=53 Identities=9% Similarity=0.032 Sum_probs=36.4
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEEcCCC-CCCchHHHHHHHhhhcCCCCCCcEEEEe
Q 007647 224 HHYKAGAMNVLTRVSGLMTNAPFMLNVDCDM-YANNPEIVLQAMCLHLGSKNENEFAFIQ 282 (595)
Q Consensus 224 ~~~KAgaLN~~l~~~~~~~~~d~vl~~DAD~-~~~~pd~L~~~v~~f~d~~~d~~vg~VQ 282 (595)
..+-++++.+++.. ..+.|.++++++|+ .+ +++.+++++..+.. .+.++.++.
T Consensus 72 ~~g~~~ai~~a~~~---l~~~~~vlv~~gD~p~i-~~~~i~~l~~~~~~--~~~d~ti~~ 125 (448)
T PRK14357 72 QLGTAHAVMCARDF---IEPGDDLLILYGDVPLI-SENTLKRLIEEHNR--KGADVTILV 125 (448)
T ss_pred CCChHHHHHHHHHh---cCcCCeEEEEeCCcccC-CHHHHHHHHHHHHh--cCCeEEEEE
Confidence 34779999998884 23358899999998 44 56778888877642 234454443
No 122
>cd06425 M1P_guanylylT_B_like_N N-terminal domain of the M1P-guanylyltransferase B-isoform like proteins. GDP-mannose pyrophosphorylase (GTP: alpha-d-mannose-1-phosphate guanyltransferase) catalyzes the formation of GDP-d-mannose from GTP and alpha-d-mannose-1-Phosphate. It contains an N-terminal catalytic domain and a C-terminal Lefthanded-beta-Helix fold domain. GDP-d-mannose is the activated form of mannose for formation of cell wall lipoarabinomannan and various mannose-containing glycolipids and polysaccharides. The function of GDP-mannose pyrophosphorylase is essential for cell wall integrity, morphogenesis and viability. Repression of GDP-mannose pyrophosphorylase in yeast leads to phenotypes, such as cell lysis, defective cell wall, and failure of polarized growth and cell separation.
Probab=25.02 E-value=3.8e+02 Score=26.23 Aligned_cols=42 Identities=14% Similarity=0.282 Sum_probs=27.7
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEEcCCCCCCchHHHHHHHhhhc
Q 007647 225 HYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHL 270 (595)
Q Consensus 225 ~~KAgaLN~~l~~~~~~~~~d~vl~~DAD~~~~~pd~L~~~v~~f~ 270 (595)
.|-++++..+..... ..+.+ ++++.+|.+. +.+ +++++.++.
T Consensus 84 ~G~~~al~~a~~~~~-~~~~~-~lv~~~D~~~-~~~-~~~~~~~~~ 125 (233)
T cd06425 84 LGTAGPLALARDLLG-DDDEP-FFVLNSDVIC-DFP-LAELLDFHK 125 (233)
T ss_pred CccHHHHHHHHHHhc-cCCCC-EEEEeCCEee-CCC-HHHHHHHHH
Confidence 577889998887421 01245 5777999986 555 467776664
No 123
>cd02503 MobA MobA catalyzes the formation of molybdopterin guanine dinucleotide. The prokaryotic enzyme molybdopterin-guanine dinucleotide biosynthesis protein A (MobA). All mononuclear molybdoenzymes bind molybdenum in complex with an organic cofactor termed molybdopterin (MPT). In many bacteria, including Escherichia coli, molybdopterin can be further modified by attachment of a GMP group to the terminal phosphate of molybdopterin to form molybdopterin guanine dinucleotide (MGD). This GMP attachment step is catalyzed by MobA, by linking a guanosine 5'-phosphate to MPT forming molybdopterin guanine dinucleotide. This reaction requires GTP, MgCl2, and the MPT form of the cofactor. It is a reaction unique to prokaryotes, and therefore may represent a potential drug target.
Probab=24.52 E-value=2.7e+02 Score=25.99 Aligned_cols=42 Identities=19% Similarity=0.249 Sum_probs=33.8
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEEcCCCCCCchHHHHHHHhhh
Q 007647 224 HHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLH 269 (595)
Q Consensus 224 ~~~KAgaLN~~l~~~~~~~~~d~vl~~DAD~~~~~pd~L~~~v~~f 269 (595)
..|-..++..|++ ..+.+.+++++||+-.-+++.+++++..+
T Consensus 68 ~~G~~~si~~~l~----~~~~~~vlv~~~D~P~i~~~~i~~l~~~~ 109 (181)
T cd02503 68 GKGPLAGILAALR----AAPADWVLVLACDMPFLPPELLERLLAAA 109 (181)
T ss_pred CCCCHHHHHHHHH----hcCCCeEEEEeCCcCCCCHHHHHHHHHhh
Confidence 4577889999999 45689999999999433799999888765
No 124
>KOG3916 consensus UDP-Gal:glucosylceramide beta-1,4-galactosyltransferase [Carbohydrate transport and metabolism]
Probab=23.72 E-value=1.6e+02 Score=31.56 Aligned_cols=41 Identities=22% Similarity=0.341 Sum_probs=27.0
Q ss_pred CeEEEEeccCCCCCChhHHHHHHHHHH---hcCCCCCCeEEEEEeCCCCc
Q 007647 94 PVDMFVTTADAELEPPIITVNTVLSLL---AVDYPVHKLACYVSDDACSP 140 (595)
Q Consensus 94 ~V~V~IptynE~~Ep~~vv~~tl~s~l---~ldYP~~kl~V~v~DDg~~d 140 (595)
+|+|+||-.|-| |.+-....-+..+| ++||- |||++--+.+
T Consensus 152 kvAIIIPfR~Re-~HL~~~l~~LhP~LqrQrL~y~-----iyVieQ~g~~ 195 (372)
T KOG3916|consen 152 KVAIIIPFRNRE-EHLRYLLHHLHPFLQRQRLDYR-----IYVIEQAGNK 195 (372)
T ss_pred eeEEEeecccHH-HHHHHHHHHhhHHHHhhhhcee-----EEEEEecCCC
Confidence 788999988877 55555555555555 34555 8888765543
No 125
>PF13733 Glyco_transf_7N: N-terminal region of glycosyl transferase group 7; PDB: 2AGD_B 3EE5_A 2AE7_B 2AEC_A 2FYA_A 2AES_B 2AH9_A 2FYB_A 2FY7_A 3LW6_A ....
Probab=23.37 E-value=82 Score=29.25 Aligned_cols=42 Identities=17% Similarity=0.176 Sum_probs=25.2
Q ss_pred CeEEEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCC
Q 007647 94 PVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDAC 138 (595)
Q Consensus 94 ~V~V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~ 138 (595)
+|.|+||-.|-+ +.+......+...|+-.- -.+.|+|++-.+
T Consensus 48 kvAiIIPyRdR~-~hL~~fl~~l~~~L~rQ~--~~y~I~vieQ~~ 89 (136)
T PF13733_consen 48 KVAIIIPYRDRE-EHLRIFLPHLHPFLQRQQ--LDYRIFVIEQVD 89 (136)
T ss_dssp EEEEEEEESS-H-HHHHHHHHHHHHHHHHTT---EEEEEEEEE-S
T ss_pred ceEEEEEeCCHH-HHHHHHHHHHHHHHhhCc--ceEEEEEEeecc
Confidence 899999999976 444444454545553221 146699987654
No 126
>PHA01631 hypothetical protein
Probab=22.77 E-value=93 Score=29.83 Aligned_cols=72 Identities=14% Similarity=0.177 Sum_probs=40.7
Q ss_pred hHHHHHHHHHhcCCCCCCCEEEEEcCCCCCCchHHHHHHHhhhcCCCCCCcEEEEeCCccccCchhhhHhhHhhhhhhhc
Q 007647 227 KAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYDRPENLCILNEYIGKGIV 306 (595)
Q Consensus 227 KAgaLN~~l~~~~~~~~~d~vl~~DAD~~~~~pd~L~~~v~~f~d~~~d~~vg~VQ~pq~f~d~~~~~~~f~~~~~~g~~ 306 (595)
=|..|-..+..-. ..+-|+++++|+|-++|+-+.+ + .++.+.-..-|-.. .+.
T Consensus 56 IAk~Ll~Iln~~s-~i~DDi~~iIDSDV~ipn~~~~-------~---~~~~v~t~CiPA~~---------------kp~- 108 (176)
T PHA01631 56 IAKQLLTIVNFAK-NIEDDIIAIIDSDLIIPNLREI-------I---PNERVFTPCYWLYY---------------DWA- 108 (176)
T ss_pred HHHHHHHHHHhhc-cCCccEEEEeccceEecCcccc-------c---cCCCccceeeeeee---------------cCC-
Confidence 3445555544211 3678999999999999754332 1 12233322222211 111
Q ss_pred ccCCceeccccceeehhhh
Q 007647 307 GIQGPFYQGTGTFHRRDVV 325 (595)
Q Consensus 307 ~~~~~~~~Gtg~~~rr~al 325 (595)
+.-.++|.|||.+++|+-+
T Consensus 109 ~~v~~FC~sTNf~~pr~~l 127 (176)
T PHA01631 109 NEIRPFCSGTNYIFRKSLL 127 (176)
T ss_pred CcEEEEEccccEEeeHHHh
Confidence 1224788999999999876
No 127
>PRK14355 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=22.71 E-value=8.1e+02 Score=26.91 Aligned_cols=43 Identities=12% Similarity=-0.004 Sum_probs=32.2
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEEcCCC-CCCchHHHHHHHhhhc
Q 007647 225 HYKAGAMNVLTRVSGLMTNAPFMLNVDCDM-YANNPEIVLQAMCLHL 270 (595)
Q Consensus 225 ~~KAgaLN~~l~~~~~~~~~d~vl~~DAD~-~~~~pd~L~~~v~~f~ 270 (595)
.+-++++..++.... .+.|.++++++|+ .+ .++.+.+++..+.
T Consensus 79 ~Gt~~al~~a~~~l~--~~~~~vlv~~gD~p~~-~~~~i~~l~~~~~ 122 (459)
T PRK14355 79 LGTGHAVACAAPALD--GFSGTVLILCGDVPLL-RAETLQGMLAAHR 122 (459)
T ss_pred CCHHHHHHHHHHHhh--ccCCcEEEEECCccCc-CHHHHHHHHHHHH
Confidence 477899999888421 1257899999998 55 5788888887764
No 128
>PLN02728 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
Probab=22.52 E-value=7.5e+02 Score=25.14 Aligned_cols=41 Identities=5% Similarity=-0.138 Sum_probs=27.1
Q ss_pred hHHHHHHHHHhcCCCCCCCEEEEEcCCCCCCchHHHHHHHhhh
Q 007647 227 KAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLH 269 (595)
Q Consensus 227 KAgaLN~~l~~~~~~~~~d~vl~~DAD~~~~~pd~L~~~v~~f 269 (595)
..+.+-+|++.. ..+.++|++.|+|.=.-.++.+.+++...
T Consensus 103 r~~SV~~gl~~l--~~~~~~VlihDaarP~vs~~~i~~li~~~ 143 (252)
T PLN02728 103 RQDSVFNGLQEV--DANSELVCIHDSARPLVTSADIEKVLKDA 143 (252)
T ss_pred hHHHHHHHHHhc--cCCCCEEEEecCcCCCCCHHHHHHHHHHH
Confidence 345566677632 13578999999965433688888877644
No 129
>PRK13368 3-deoxy-manno-octulosonate cytidylyltransferase; Provisional
Probab=22.39 E-value=7.3e+02 Score=24.19 Aligned_cols=40 Identities=15% Similarity=0.076 Sum_probs=28.0
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEEcCCC-CCCchHHHHHHHhhhc
Q 007647 225 HYKAGAMNVLTRVSGLMTNAPFMLNVDCDM-YANNPEIVLQAMCLHL 270 (595)
Q Consensus 225 ~~KAgaLN~~l~~~~~~~~~d~vl~~DAD~-~~~~pd~L~~~v~~f~ 270 (595)
.+.++ +-.+++. .+.|.+++++||+ .+ +++.+.+++..+.
T Consensus 75 ~g~~~-~~~a~~~----~~~d~~lv~~~D~P~i-~~~~i~~l~~~~~ 115 (238)
T PRK13368 75 SGTDR-LAEVMLK----IEADIYINVQGDEPMI-RPRDIDTLIQPML 115 (238)
T ss_pred CccHH-HHHHHHh----CCCCEEEEEcCCcCcC-CHHHHHHHHHHHH
Confidence 34554 3335552 3568999999998 44 6899999888774
No 130
>PRK02726 molybdopterin-guanine dinucleotide biosynthesis protein A; Provisional
Probab=21.71 E-value=4e+02 Score=25.73 Aligned_cols=41 Identities=10% Similarity=0.057 Sum_probs=32.4
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEEcCCCCCCchHHHHHHHhhh
Q 007647 225 HYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLH 269 (595)
Q Consensus 225 ~~KAgaLN~~l~~~~~~~~~d~vl~~DAD~~~~~pd~L~~~v~~f 269 (595)
.|-..++-.|++ ..+.+.+++++||+=.-+++.+++++...
T Consensus 78 ~G~~~si~~~l~----~~~~~~vlv~~~D~P~i~~~~i~~l~~~~ 118 (200)
T PRK02726 78 QGPLVAFAQGLP----QIKTEWVLLLACDLPRLTVDVLQEWLQQL 118 (200)
T ss_pred CChHHHHHHHHH----hCCCCcEEEEeCCCCCCCHHHHHHHHHHh
Confidence 466678888888 34569999999999766899998888765
No 131
>PLN03153 hypothetical protein; Provisional
Probab=21.40 E-value=6.5e+02 Score=28.72 Aligned_cols=28 Identities=11% Similarity=0.165 Sum_probs=23.5
Q ss_pred CCCCCEEEEEcCCCCCCchHHHHHHHhhh
Q 007647 241 MTNAPFMLNVDCDMYANNPEIVLQAMCLH 269 (595)
Q Consensus 241 ~~~~d~vl~~DAD~~~~~pd~L~~~v~~f 269 (595)
..+.+.+++.|.|+++ .++-|.+.+.-+
T Consensus 208 ~pd~kWfVf~DDDTyf-~~~NLv~~Ls~Y 235 (537)
T PLN03153 208 LPDVRWFVLGDDDTIF-NADNLVAVLSKY 235 (537)
T ss_pred CCCCCEEEEecCCccc-cHHHHHHHHhhc
Confidence 3788999999999999 488888877665
No 132
>PF12804 NTP_transf_3: MobA-like NTP transferase domain; PDB: 3FWW_A 2XME_D 2XMH_C 2DPW_A 2WAW_A 2OI5_B 1HV9_B 1FWY_A 2OI6_A 2OI7_B ....
Probab=21.30 E-value=3.6e+02 Score=24.45 Aligned_cols=54 Identities=9% Similarity=0.028 Sum_probs=40.9
Q ss_pred CCChHHHHHHHHHhcCCCC-CCCEEEEEcCCCCCCchHHHHHHHhhhcCCCCCCcEEEEeC
Q 007647 224 HHYKAGAMNVLTRVSGLMT-NAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQS 283 (595)
Q Consensus 224 ~~~KAgaLN~~l~~~~~~~-~~d~vl~~DAD~~~~~pd~L~~~v~~f~d~~~d~~vg~VQ~ 283 (595)
..|=..++-.|++ .. +.+.++++-||+..-+++.+++++..+.+ .+.+++++..
T Consensus 69 ~~G~~~sl~~a~~----~~~~~~~vlv~~~D~p~~~~~~l~~l~~~~~~--~~~~i~~~~~ 123 (160)
T PF12804_consen 69 GQGPLASLLAALS----QLPSSEPVLVLPCDQPFLSPELLRRLLEALEK--SPADIVVPVF 123 (160)
T ss_dssp SCSHHHHHHHHHH----TSTTSSEEEEEETTETTS-HHHHHHHHHHHHH--TTTSEEEEEE
T ss_pred cCChHHHHHHHHH----hcccCCCcEEEeCCccccCHHHHHHHHHHHhc--cCCcEEEEEE
Confidence 4688888888988 34 89999999999943379999999987742 3466776654
No 133
>PRK14353 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=20.66 E-value=6.3e+02 Score=27.52 Aligned_cols=43 Identities=12% Similarity=-0.113 Sum_probs=30.6
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEEcCCC-CCCchHHHHHHHhhh
Q 007647 224 HHYKAGAMNVLTRVSGLMTNAPFMLNVDCDM-YANNPEIVLQAMCLH 269 (595)
Q Consensus 224 ~~~KAgaLN~~l~~~~~~~~~d~vl~~DAD~-~~~~pd~L~~~v~~f 269 (595)
..|-++++-.+++... .+.|.+++++||+ .+ +++.+++++.++
T Consensus 81 ~~G~~~sl~~a~~~l~--~~~~~~lv~~~D~P~i-~~~~l~~l~~~~ 124 (446)
T PRK14353 81 RLGTAHAVLAAREALA--GGYGDVLVLYGDTPLI-TAETLARLRERL 124 (446)
T ss_pred CCCcHHHHHHHHHHHh--ccCCCEEEEeCCcccC-CHHHHHHHHHhH
Confidence 3467888888877421 1346688899998 66 688898888755
No 134
>PF15050 SCIMP: SCIMP protein
Probab=20.56 E-value=1.3e+02 Score=27.21 Aligned_cols=40 Identities=20% Similarity=0.330 Sum_probs=22.4
Q ss_pred hhhhhhhHHHHHHHHHHHHH-----HHHHHHHHhcCCCCCeeeCcC
Q 007647 547 SWWVNNCMARIVTTSAWLFG-----LVNAALEQFGFSEAVFEITQK 587 (595)
Q Consensus 547 ~~w~~~~~~~i~~~~~~~~~-----~~~~~~~~l~~~~~~F~vT~K 587 (595)
+||++. ||+|.++...+.+ ++-.+.+++.+.+.+++++.-
T Consensus 2 ~WWr~n-FWiiLAVaII~vS~~lglIlyCvcR~~lRqGkkweiakp 46 (133)
T PF15050_consen 2 SWWRDN-FWIILAVAIILVSVVLGLILYCVCRWQLRQGKKWEIAKP 46 (133)
T ss_pred chHHhc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccceeccc
Confidence 588774 7776554322211 222334566677788888754
No 135
>cd06430 GT8_like_2 GT8_like_2 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=20.45 E-value=1e+03 Score=25.14 Aligned_cols=37 Identities=19% Similarity=0.156 Sum_probs=25.6
Q ss_pred CCCCEEEEEcCCCCCCchHHHHHHHhhhcCCCCCCcEEEE
Q 007647 242 TNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFI 281 (595)
Q Consensus 242 ~~~d~vl~~DAD~~~~~pd~L~~~v~~f~d~~~d~~vg~V 281 (595)
.+-|-|+-+|||.++ . +-|.++...|.|. .+..++.|
T Consensus 95 p~~dkvLYLD~Dii~-~-~dI~eL~~~~~df-~~~~~aA~ 131 (304)
T cd06430 95 PDVDSLLYVDTDILF-L-RPVEEIWSFLKKF-NSTQLAAM 131 (304)
T ss_pred hhhceEEEeccceee-c-CCHHHHHHHHhhc-CCCeEEEE
Confidence 467899999999998 3 5677777654332 34456665
Done!