Query 007647
Match_columns 595
No_of_seqs 282 out of 1858
Neff 6.9
Searched_HMMs 29240
Date Mon Mar 25 07:01:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007647.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007647hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hg6_A Cellulose synthase subu 100.0 8.6E-50 2.9E-54 464.5 45.9 427 19-593 62-514 (802)
2 3bcv_A Putative glycosyltransf 99.8 4.6E-20 1.6E-24 181.8 16.5 107 92-270 4-110 (240)
3 1xhb_A Polypeptide N-acetylgal 99.8 1E-19 3.5E-24 198.9 20.3 122 89-281 25-148 (472)
4 1qg8_A Protein (spore coat pol 99.8 5.3E-21 1.8E-25 190.6 8.7 226 93-453 1-235 (255)
5 2z86_A Chondroitin synthase; G 99.8 8.4E-20 2.9E-24 206.3 17.9 125 91-288 91-215 (625)
6 2z86_A Chondroitin synthase; G 99.8 2.4E-19 8.3E-24 202.5 13.8 221 91-458 373-598 (625)
7 2d7i_A Polypeptide N-acetylgal 99.8 9.3E-19 3.2E-23 196.4 17.3 120 89-279 108-228 (570)
8 2ffu_A Ppgalnact-2, polypeptid 99.8 2E-18 7E-23 190.3 13.5 111 89-270 62-172 (501)
9 3ckj_A Putative uncharacterize 99.7 5.1E-17 1.8E-21 169.7 13.2 124 90-284 45-169 (329)
10 4fix_A UDP-galactofuranosyl tr 99.6 4.8E-16 1.6E-20 176.8 12.4 125 91-283 178-304 (657)
11 3l7i_A Teichoic acid biosynthe 99.6 4.2E-17 1.5E-21 187.9 0.0 107 93-269 2-108 (729)
12 3f1y_A Mannosyl-3-phosphoglyce 99.6 2.2E-14 7.5E-19 153.4 15.3 123 90-283 91-216 (387)
13 2fy7_A Beta-1,4-galactosyltran 99.5 7.1E-15 2.4E-19 151.1 9.6 181 91-458 63-263 (287)
14 2nxv_A ATP synthase subunits r 99.3 1.4E-11 4.8E-16 123.4 12.5 98 91-282 14-113 (249)
15 2bo4_A Mannosylglycerate synth 99.1 2.3E-09 7.9E-14 114.7 17.3 42 224-270 73-119 (397)
16 2wvl_A Mannosyl-3-phosphoglyce 98.6 1.8E-07 6.3E-12 97.0 11.7 134 90-269 50-183 (391)
17 2zu9_A Mannosyl-3-phosphoglyce 98.6 1E-07 3.5E-12 101.1 9.4 39 225-269 143-184 (394)
18 1fo8_A Alpha-1,3-mannosyl-glyc 98.3 2.4E-06 8.2E-11 89.5 10.7 125 92-283 1-138 (343)
19 3lw6_A FI08434P, beta-4-galact 90.0 0.63 2.2E-05 46.8 7.6 53 406-458 185-250 (287)
20 2c0n_A A197; thermophil protei 64.6 16 0.00054 34.8 7.3 31 231-266 45-78 (203)
21 3oam_A 3-deoxy-manno-octuloson 59.4 37 0.0013 32.7 9.4 52 225-281 74-126 (252)
22 3k8d_A 3-deoxy-manno-octuloson 58.5 45 0.0015 32.7 9.9 55 225-283 90-144 (264)
23 3tqd_A 3-deoxy-manno-octuloson 48.5 91 0.0031 30.3 10.2 44 225-270 81-124 (256)
24 2wee_A MOBA-related protein; u 47.6 51 0.0017 29.8 7.8 41 225-268 79-120 (197)
25 4fce_A Bifunctional protein GL 45.6 48 0.0016 34.6 8.2 43 224-270 82-125 (459)
26 2j0a_A Beta-1,3-N-acetylglucos 43.7 1.1E+02 0.0039 30.1 10.2 27 242-269 92-118 (280)
27 2waw_A MOBA relate protein; un 40.6 68 0.0023 28.9 7.5 42 225-268 79-120 (199)
28 1ezi_A CMP-N-acetylneuraminic 38.4 1.8E+02 0.0063 26.8 10.4 44 225-270 80-123 (228)
29 3tzt_A Glycosyl transferase fa 37.4 1.7E+02 0.0058 28.6 10.3 52 94-149 5-56 (276)
30 4fcu_A 3-deoxy-manno-octuloson 35.3 1.3E+02 0.0046 29.0 9.0 53 229-284 77-130 (253)
31 1qwj_A Cytidine monophospho-N- 35.2 2.2E+02 0.0076 26.4 10.5 42 226-270 80-121 (229)
32 1h7e_A 3-deoxy-manno-octuloson 31.1 2.3E+02 0.008 26.3 9.9 41 225-270 75-115 (245)
33 1vgw_A 4-diphosphocytidyl-2C-m 31.0 1.9E+02 0.0066 26.5 9.2 46 225-270 82-130 (231)
34 3d5n_A Q97W15_sulso; NESG, SSR 30.8 99 0.0034 28.3 6.9 41 225-269 71-112 (197)
35 1vic_A 3-deoxy-manno-octuloson 28.2 2.6E+02 0.0089 26.5 9.8 29 242-270 89-117 (262)
36 3f1c_A Putative 2-C-methyl-D-e 27.1 1.5E+02 0.0051 28.1 7.7 45 226-270 84-131 (246)
37 2y6p_A 3-deoxy-manno-octuloson 25.0 1.1E+02 0.0036 28.5 6.1 41 224-270 71-112 (234)
38 3rsb_A Adenosylcobinamide-phos 24.3 42 0.0014 30.5 2.9 40 226-270 79-118 (196)
39 2l9u_A Receptor tyrosine-prote 22.7 66 0.0022 21.7 2.7 16 27-42 18-33 (40)
40 2xwl_A 2-C-methyl-D-erythritol 21.8 1.2E+02 0.004 27.9 5.6 40 226-269 78-118 (223)
No 1
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=100.00 E-value=8.6e-50 Score=464.55 Aligned_cols=427 Identities=20% Similarity=0.273 Sum_probs=325.2
Q ss_pred chhHHHHHH-HHHHHHHHHHHHHhhccccch------hhHHHHHHHHHHHHHHHHHHHHHhhccccccCCccchhhccCC
Q 007647 19 NTYHRALDV-IILFLLLCLLFYRLSTLKNHG------FAWFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQERIQE 91 (595)
Q Consensus 19 ~~~~r~~~~-~~~~~~~~yl~wR~~~~~~~~------~~w~~~~~~e~~~~~~~~l~~~~~~~p~~r~~~~~~l~~~~~~ 91 (595)
+...|++.+ +.+++++.|++||++.+++.. +.|++++++|+++.+.+++..+..++|..|.+.++. ++++
T Consensus 62 ~~~~~~~~~~~~~~~~~~y~~wr~~~tl~~~~~~~~~~~~~~ll~~~~~~~~~~l~~~~~~~~~~~r~~~~~~---~~~~ 138 (802)
T 4hg6_A 62 KMVPRFLLLSAASMLVMRYWFWRLFETLPPPALDASFLFALLLFAVETFSISIFFLNGFLSADPTDRPFPRPL---QPEE 138 (802)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCCCCCC---CTTT
T ss_pred CcchHHHHHHHHHHHHHHHHHHHhheecCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCC---CccC
Confidence 334455554 555556899999999999853 345668899999999999999999998877665442 2567
Q ss_pred CCCeEEEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHH-----HHHHHHHhhhhhhhhhhhcccc
Q 007647 92 LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFY-----SLVEASKFAKLWVPFCKKYNVQ 166 (595)
Q Consensus 92 ~P~V~V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~-----~l~e~~~~a~~w~p~c~~~gv~ 166 (595)
.|+|+|+||+|| |+.+++++||+|+++++||.++++|+|+||||+|+|.+ .+++..+-.+....+|+++
T Consensus 139 ~P~VSViIPtyN---e~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~~d~~i~~~~~~~~~~l~~~~~~~--- 212 (802)
T 4hg6_A 139 LPTVDILVPSYN---EPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMSPDPELAQKAQERRRELQQLCREL--- 212 (802)
T ss_dssp CCCEEEEEECTT---CCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTCSSHHHHHHHHHHHHHHHHHHHHH---
T ss_pred CCcEEEEEEECC---CCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCccccccCCHHHHHHHHhhhHHHHHHHHhc---
Confidence 899999999999 66678899999999999999899999999999999852 2222111000011122222
Q ss_pred cCCcccccCCCCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCE
Q 007647 167 IRAPFRYFPDSEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPF 246 (595)
Q Consensus 167 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~ 246 (595)
+++|+.|++ +++||++|+|.|++ .+++||
T Consensus 213 -------------------------------------------~v~~i~~~~----~~~GKa~alN~gl~----~a~gd~ 241 (802)
T 4hg6_A 213 -------------------------------------------GVVYSTRER----NEHAKAGNMSAALE----RLKGEL 241 (802)
T ss_dssp -------------------------------------------TCEEEECSS----CCSHHHHHHHHHHH----HCCCSE
T ss_pred -------------------------------------------CcEEEEecC----CCCcchHHHHHHHH----hcCCCE
Confidence 457888775 45799999999999 689999
Q ss_pred EEEEcCCCCCCchHHHHHHHhhhcCCCCCCcEEEEeCCcccc--Cchhh-----------hHhhHhhhhhhhcccCCcee
Q 007647 247 MLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFY--DRPEN-----------LCILNEYIGKGIVGIQGPFY 313 (595)
Q Consensus 247 vl~~DAD~~~~~pd~L~~~v~~f~d~~~d~~vg~VQ~pq~f~--d~~~~-----------~~~f~~~~~~g~~~~~~~~~ 313 (595)
|+++|||+++ +||+|++++.+|. .|+++++||+++.+. |+..+ ...|+.....+.+.+++.++
T Consensus 242 Il~lDaD~~~-~pd~L~~lv~~~~---~dp~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (802)
T 4hg6_A 242 VVVFDADHVP-SRDFLARTVGYFV---EDPDLFLVQTPHFFINPDPIQRNLALGDRCPPENEMFYGKIHRGLDRWGGAFF 317 (802)
T ss_dssp EEECCTTEEE-CTTHHHHHHHHHH---HSSSCCEEECCCCBSSCCHHHHHHTCCTTSCCTTHHHHHTHHHHHHHTTCCCC
T ss_pred EEEECCCCCc-ChHHHHHHHHHHh---cCCCeEEEeccEEEeCCchHhhhhhHHhhhhHHHHHHHHHHHhhHhhcCCcee
Confidence 9999999997 7999999999996 578999999999887 33322 36778888999999999999
Q ss_pred ccccceeehhhhhcccchhhhhccchhHHHHHHhhCCcHHHHHHHHHhhcCCcCCCCCchhhhHHHHhHhhccccccCCC
Q 007647 314 QGTGTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSS 393 (595)
Q Consensus 314 ~Gtg~~~rr~al~g~~~~~~~~~~~~~~~~~~~~~g~s~~f~~s~~~~~r~~~~~~~~~~~~~~~~~~~vg~c~ye~~~~ 393 (595)
+|+++++||+++. ++|
T Consensus 318 ~G~~~~~Rr~al~-------------------------------------------------------~vG--------- 333 (802)
T 4hg6_A 318 CGSAAVLRRRALD-------------------------------------------------------EAG--------- 333 (802)
T ss_dssp CSSSEEEEHHHHH-------------------------------------------------------HHT---------
T ss_pred cccchhhhHHHHH-------------------------------------------------------HcC---------
Confidence 9999999999882 455
Q ss_pred cCccccCCCCCccchHHHHHHHHhCCcEEEEeCCCCcceeccCCCCHHHHHHHHHHhhhhhHHHHHhhcchhhhhccCCC
Q 007647 394 WGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKL 473 (595)
Q Consensus 394 w~~~~G~~~~~itED~~t~~~l~~~Gwr~~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G~~q~~~~~~~pl~~~~~~~l 473 (595)
||++++++||.+++.+++++||++.|++ ++.+++.+|+|++++++||.||++|.+|+++. ++|++. +++
T Consensus 334 -----gf~~~~~~ED~~l~~rl~~~G~ri~~~~--~~~~~~~~p~t~~~~~~Qr~RW~~G~~q~l~~-~~pl~~---~~l 402 (802)
T 4hg6_A 334 -----GFAGETITEDAETALEIHSRGWKSLYID--RAMIAGLQPETFASFIQQRGRWATGMMQMLLL-KNPLFR---RGL 402 (802)
T ss_dssp -----TCCCSSSSHHHHHHHHHHTTTCCEEECC--CCCEEECCCCSHHHHHHHHHHHHHHHHHHHHH-SCTTSC---SSC
T ss_pred -----CcCCCCcchHHHHHHHHHHcCCeEEEec--CCEEEecCCCCHHHHHHHHHHHHccHHHHHHH-hCcccc---CCC
Confidence 8998999999999999999999999997 46889999999999999999999999999974 578775 799
Q ss_pred CHHHHHHhHHhhhhhhhHHHHHHHHHHHHHHHHhCCccccccChhhHHHHHHHHHHHHHHHHHH-HHHhCCccchhhhhh
Q 007647 474 QFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLE-YIQAGLSIRSWWVNN 552 (595)
Q Consensus 474 ~~~qrl~y~~~~~~~~~~~~~l~~~~~p~~~l~~g~~~~p~~~~~~~~~~~~~~l~~~~~~~~~-~~~~g~~~~~~w~~~ 552 (595)
++.+++.|+....+++.+++.++++++|+++++++..+++..... ++.+++++++...+. ....+.....|| ..
T Consensus 403 ~~~~rl~~l~~~~~~~~~~~~li~ll~p~~~ll~~~~~~~~~~~~----~~~~~lp~~l~~~~~~~~~~~~~r~~~~-~~ 477 (802)
T 4hg6_A 403 GIAQRLCYLNSMSFWFFPLVRMMFLVAPLIYLFFGIEIFVATFEE----VLAYMPGYLAVSFLVQNALFARQRWPLV-SE 477 (802)
T ss_dssp CHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHCCCCSCCCHHH----HHHHHHHHHHHHHHHHHHHHTTTSCTTH-HH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhhcCHHH----HHHHHHHHHHHHHHHHHHHhcCcHHHHH-HH
Confidence 999999999988888888889999999999999998766653222 223334444432221 122333223344 33
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCcCCCCCcc
Q 007647 553 CMARIVTTSAWLFGLVNAALEQFGFSEAVFEITQKIHRSQR 593 (595)
Q Consensus 553 ~~~~i~~~~~~~~~~~~~~~~~l~~~~~~F~vT~K~~~~~~ 593 (595)
.++.+ ..++.+...+..++++++.+|+||+||...++
T Consensus 478 l~~~~----~~~~~~~a~l~~l~~~~~~~f~VT~Kg~~~~~ 514 (802)
T 4hg6_A 478 VYEVA----QAPYLARAIVTTLLRPRSARFAVTAKDETLSE 514 (802)
T ss_dssp HHHHH----HHHHHHHHHHHHHHSTTCCCCCCCCCCCCCSS
T ss_pred HHHHH----HHHHHHHHHHHHHhCCCCCcceECCCCccccc
Confidence 33222 22222233334456778899999999976654
No 2
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=99.83 E-value=4.6e-20 Score=181.84 Aligned_cols=107 Identities=16% Similarity=0.171 Sum_probs=92.0
Q ss_pred CCCeEEEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhcccccCCcc
Q 007647 92 LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPF 171 (595)
Q Consensus 92 ~P~V~V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~r~~~ 171 (595)
.|.|+|+||+||+++ .+.++|.|+++++|| .++|+|+||||+|.|.+.+++.++
T Consensus 4 ~p~vsViIp~yn~~~----~l~~~l~Sl~~q~~~--~~eiIvvDd~S~d~t~~~~~~~~~-------------------- 57 (240)
T 3bcv_A 4 IPKVSVIVPIYNVEK----YLDQCVQALLAQTLS--DIEIILIDDESPDNCPKICDDYAA-------------------- 57 (240)
T ss_dssp CCSEEEEEEESSCTT----THHHHHHHHHTCSSS--SEEEEEEECCCSSSHHHHHHHHHH--------------------
T ss_pred CCcEEEEEecCCCHH----HHHHHHHHHHhCcCC--CeEEEEEECCCCcCHHHHHHHHHh--------------------
Confidence 589999999999765 899999999999999 799999999999999876654321
Q ss_pred cccCCCCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEEc
Q 007647 172 RYFPDSEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVD 251 (595)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl~~D 251 (595)
.+|++++++. ++.|+++|+|.|++ .++||||+++|
T Consensus 58 -----------------------------------~~~~i~~i~~------~n~G~~~a~N~g~~----~a~g~~i~~lD 92 (240)
T 3bcv_A 58 -----------------------------------QYPNIKVIHK------KNAGLGMACNSGLD----VATGEYVAFCD 92 (240)
T ss_dssp -----------------------------------HCSSEEEEEC------CCCCHHHHHHHHHH----HCCSSEEEECC
T ss_pred -----------------------------------hCCCEEEEEC------CCCChHHHHHHHHH----HcCCCEEEEEC
Confidence 1357788853 24689999999999 68999999999
Q ss_pred CCCCCCchHHHHHHHhhhc
Q 007647 252 CDMYANNPEIVLQAMCLHL 270 (595)
Q Consensus 252 AD~~~~~pd~L~~~v~~f~ 270 (595)
+|.++ +|++|.+++..+.
T Consensus 93 ~Dd~~-~~~~l~~l~~~~~ 110 (240)
T 3bcv_A 93 SDDYV-DSDMYMTMYNVAQ 110 (240)
T ss_dssp TTCCC-CTTHHHHHHHHHH
T ss_pred CCCcC-CHHHHHHHHHHHH
Confidence 99997 7999999999885
No 3
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=99.83 E-value=1e-19 Score=198.86 Aligned_cols=122 Identities=11% Similarity=-0.001 Sum_probs=99.7
Q ss_pred cCCCCCeEEEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcc-hHHHHHHHHHhhhhhhhhhhhccccc
Q 007647 89 IQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPL-NFYSLVEASKFAKLWVPFCKKYNVQI 167 (595)
Q Consensus 89 ~~~~P~V~V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~-T~~~l~e~~~~a~~w~p~c~~~gv~~ 167 (595)
++..|.|+|+||+|||+ .+.+.+||.|+++++||...+||+|+||||+|. |.+.+++.++
T Consensus 25 ~~~~p~vSVIIp~yN~~---~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~~l~~~~~---------------- 85 (472)
T 1xhb_A 25 PDNLPTTSVVIVFHNEA---WSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYVK---------------- 85 (472)
T ss_dssp CSCCCCEEEEEEESSCC---HHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHHHHH----------------
T ss_pred CcCCCCeEEEEEeCCCC---HHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHHHHHHHHH----------------
Confidence 35689999999999954 449999999999999996557999999999994 8766654321
Q ss_pred CCcccccCCCCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCC-cEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCE
Q 007647 168 RAPFRYFPDSEPSDSSSGELLQDWKNMKVISENKGGLSDEIP-HLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPF 246 (595)
Q Consensus 168 r~~~~~~~~~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p-~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~ 246 (595)
.+| +++++..++ +.|+++|+|.|++ .++||+
T Consensus 86 ---------------------------------------~~~~~v~vi~~~~-----n~G~~~a~N~g~~----~A~gd~ 117 (472)
T 1xhb_A 86 ---------------------------------------KLKVPVHVIRMEQ-----RSGLIRARLKGAA----VSRGQV 117 (472)
T ss_dssp ---------------------------------------SSSSCEEEEECSS-----CCCHHHHHHHHHH----HCCSSE
T ss_pred ---------------------------------------HCCCcEEEEECCC-----CCChHHHHHHHHH----hccCCe
Confidence 235 688887654 3579999999999 689999
Q ss_pred EEEEcCCCCCCchHHHHHHHhhhcCCCCCCcEEEE
Q 007647 247 MLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFI 281 (595)
Q Consensus 247 vl~~DAD~~~~~pd~L~~~v~~f~d~~~d~~vg~V 281 (595)
|+++|+|.++ +|++|.+++..+. .+++++++
T Consensus 118 i~flD~D~~~-~p~~L~~ll~~~~---~~~~~~v~ 148 (472)
T 1xhb_A 118 ITFLDAHCEC-TAGWLEPLLARIK---HDRRTVVC 148 (472)
T ss_dssp EEEEESSEEE-CTTCHHHHHHHHH---HCTTEEEE
T ss_pred EEEECCCeEe-CccHHHHHHHHHH---hCCCEEEE
Confidence 9999999997 7999999999885 45666544
No 4
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=99.83 E-value=5.3e-21 Score=190.57 Aligned_cols=226 Identities=12% Similarity=0.074 Sum_probs=139.7
Q ss_pred CCeEEEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhcccccCCccc
Q 007647 93 PPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFR 172 (595)
Q Consensus 93 P~V~V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~r~~~~ 172 (595)
|.|+|+||+||+++ .+.+||.|+++++|| .++|+|+||||+|.|.+.+++.+
T Consensus 1 p~vSViIp~yn~~~----~l~~~l~Sl~~q~~~--~~eiivvDd~S~d~t~~~~~~~~---------------------- 52 (255)
T 1qg8_A 1 PKVSVIMTSYNKSD----YVAKSISSILSQTFS--DFELFIMDDNSNEETLNVIRPFL---------------------- 52 (255)
T ss_dssp CCEEEEEEESSCTT----THHHHHHHHHTCSCC--CEEEEEEECSCCHHHHHHHGGGG----------------------
T ss_pred CeEEEEEEcCCCHH----HHHHHHHHHHhccCC--ceEEEEEECCCCchHHHHHHHHh----------------------
Confidence 78999999999775 899999999999999 89999999999998875543210
Q ss_pred ccCCCCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCC----CCCCChHHHHHHHHHhcCCCCCCCEEE
Q 007647 173 YFPDSEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPK----HPHHYKAGAMNVLTRVSGLMTNAPFML 248 (595)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~----~~~~~KAgaLN~~l~~~~~~~~~d~vl 248 (595)
..++++++..+.. + ..+.|+++|+|.|++ .++||||+
T Consensus 53 ----------------------------------~~~~i~~i~~~~~-~~~~~~~n~G~~~a~N~gi~----~a~g~~i~ 93 (255)
T 1qg8_A 53 ----------------------------------NDNRVRFYQSDIS-GVKERTEKTRYAALINQAIE----MAEGEYIT 93 (255)
T ss_dssp ----------------------------------GSTTEEEEECCCC-SHHHHHSSCHHHHHHHHHHH----HCCCSEEE
T ss_pred ----------------------------------hcCCEEEEecccc-cccccccccCHHHHHHHHHH----HcCCCEEE
Confidence 0246788876510 0 014689999999999 68999999
Q ss_pred EEcCCCCCCchHHHHHHHhhhcCCCCCCcEEEEeCCcccc--Cchhh-hHhhHhhhhhhhcccCCceeccccceeehhhh
Q 007647 249 NVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFY--DRPEN-LCILNEYIGKGIVGIQGPFYQGTGTFHRRDVV 325 (595)
Q Consensus 249 ~~DAD~~~~~pd~L~~~v~~f~d~~~d~~vg~VQ~pq~f~--d~~~~-~~~f~~~~~~g~~~~~~~~~~Gtg~~~rr~al 325 (595)
++|+|.++ .|++|.+++..|. .+|++++|.+..... |.-+. ...+... .............|++.++||+++
T Consensus 94 ~lD~Dd~~-~~~~l~~~~~~~~---~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~rr~~~ 168 (255)
T 1qg8_A 94 YATDDNIY-MPDRLLKMVRELD---THPEKAVIYSASKTYHLNENRDIVKETVRP-AAQVTWNAPCAIDHCSVMHRYSVL 168 (255)
T ss_dssp EEETTEEE-CTTHHHHHHHHHH---HCTTCCEEEEEEEEEEEC---CEEEEEEEC-CCSCBSCCTTTSCGGGEEEETHHH
T ss_pred EeCCCCcc-ChHHHHHHHHHHH---hCCCceEEEeceEEEEeCCCCcchhhccCc-hHHHHHhhcCCCccceEEEEHHHH
Confidence 99999998 7999999999885 457788887654432 22111 0000000 000111122334567777888776
Q ss_pred hcccchhhhhccchhHHHHHHhhCCcHHHHHHHHHhhcCCcCCCCCchhhhHHHHhHhhccccccCCCcCccccCCCCCc
Q 007647 326 YGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGAT 405 (595)
Q Consensus 326 ~g~~~~~~~~~~~~~~~~~~~~~g~s~~f~~s~~~~~r~~~~~~~~~~~~~~~~~~~vg~c~ye~~~~w~~~~G~~~~~i 405 (595)
. ++|. +| +.-|... .....
T Consensus 169 ~-------------------------------------------------------~~g~-~f--~~~~~~~---~~~~~ 187 (255)
T 1qg8_A 169 E-------------------------------------------------------KVKE-KF--GSYWDES---PAFYR 187 (255)
T ss_dssp H-------------------------------------------------------HHHH-HH--SSSSCCC---GGGST
T ss_pred H-------------------------------------------------------hhcc-cc--cccccCC---cccch
Confidence 2 2320 00 0000000 11246
Q ss_pred cchHHHHHHHHhCCcEEEEeCCCCcceeccCCCCHHHHH--HHHHHhhhh
Q 007647 406 AEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGM--RQQKRWATG 453 (595)
Q Consensus 406 tED~~t~~~l~~~Gwr~~y~~~~~~~~~g~aP~tl~~~~--~Qr~RWa~G 453 (595)
.||.++.+++..+| +++|++. ....+-..+.+..... +|+.+|.+.
T Consensus 188 ~eD~~~~~r~~~~g-~~~~~~~-~~~~~r~~~~s~s~~~~~~~~~~~~~~ 235 (255)
T 1qg8_A 188 IGDARFFWRVNHFY-PFYPLDE-ELDLNYITDQSIHFQLFELEKNEFVRN 235 (255)
T ss_dssp THHHHHHHHHTTTC-CBEEEEE-EEEEEEEC--------------CTGGG
T ss_pred HHHHHHHHHHHHhC-CEEEecC-cEEEEEEcCCccchhHHHHHHHHHHHh
Confidence 79999999999987 6888863 3444555566666554 555555544
No 5
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.82 E-value=8.4e-20 Score=206.27 Aligned_cols=125 Identities=18% Similarity=0.184 Sum_probs=101.2
Q ss_pred CCCCeEEEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhcccccCCc
Q 007647 91 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAP 170 (595)
Q Consensus 91 ~~P~V~V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~r~~ 170 (595)
..|.|+|+||+|||+ +.+.+||.++++++||. .++|+|+||||+|.|.+.+++..
T Consensus 91 ~~p~vsviIp~~n~~----~~l~~~l~sl~~q~~~~-~~eiivvDd~s~d~t~~~~~~~~-------------------- 145 (625)
T 2z86_A 91 IIDGLSIVIPTYNRA----KILAITLACLCNQKTIY-DYEVIVADDGSKENIEEIVREFE-------------------- 145 (625)
T ss_dssp CCCCEEEEEEESSCH----HHHHHHHHHHHTCCCSS-CEEEEEEEESCSSCHHHHHHTTT--------------------
T ss_pred cCCcEEEEEecCCcH----HHHHHHHHHHHhhccCC-CeEEEEEeCCCchhHHHHHHHhh--------------------
Confidence 458999999999954 49999999999999885 79999999999998875543210
Q ss_pred ccccCCCCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEE
Q 007647 171 FRYFPDSEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNV 250 (595)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl~~ 250 (595)
..++++++.+++ +.+||++|+|.|++ .+++|+|+++
T Consensus 146 ------------------------------------~~~~i~~i~~~~----~~~g~~~a~N~g~~----~a~g~~v~~l 181 (625)
T 2z86_A 146 ------------------------------------SLLNIKYVRQKD----YGYQLCAVRNLGLR----AAKYNYVAIL 181 (625)
T ss_dssp ------------------------------------TTSCEEEEEECC----CSCCHHHHHHHHHH----HCCSSEEEEE
T ss_pred ------------------------------------hcCCeEEEEeCC----CCcchhHHHHHHHH----hCCcCEEEEE
Confidence 114678887653 34589999999999 6899999999
Q ss_pred cCCCCCCchHHHHHHHhhhcCCCCCCcEEEEeCCcccc
Q 007647 251 DCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFY 288 (595)
Q Consensus 251 DAD~~~~~pd~L~~~v~~f~d~~~d~~vg~VQ~pq~f~ 288 (595)
|+|.++ +|++|.+++..|. .++++++++..+.+.
T Consensus 182 D~D~~~-~~~~l~~~~~~~~---~~~~~~~~g~~~~~~ 215 (625)
T 2z86_A 182 DCDMAP-NPLWVQSYMELLA---VDDNVALIGPRKYID 215 (625)
T ss_dssp CTTEEE-CTTHHHHHHHHHH---HCTTEEEECCEEEEC
T ss_pred CCCCCC-CHHHHHHHHHHHh---cCCceEEEEeeeecc
Confidence 999997 7999999999985 467888887654443
No 6
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.79 E-value=2.4e-19 Score=202.51 Aligned_cols=221 Identities=15% Similarity=0.096 Sum_probs=153.9
Q ss_pred CCCCeEEEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhcccccCCc
Q 007647 91 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAP 170 (595)
Q Consensus 91 ~~P~V~V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~r~~ 170 (595)
..|.|+|+||+||+++ .+.++|.|+++++|| .++|+|+||||+|.|.+.+++..+
T Consensus 373 ~~~~vsiii~~yn~~~----~l~~~l~s~~~q~~~--~~eiivvdd~S~d~t~~~~~~~~~------------------- 427 (625)
T 2z86_A 373 RVPLVSIYIPAYNCSK----YIVRCVESALNQTIT--DLEVCICDDGSTDDTLRILQEHYA------------------- 427 (625)
T ss_dssp SSCSEEEEEEESSCTT----THHHHHHHHHSSSCC--SEEEEEEEESCSSSHHHHHHHHHT-------------------
T ss_pred cCCeEEEEEeCCCCHH----HHHHHHHHHHhCcCC--CeEEEEEECcCChhHHHHHHHHHh-------------------
Confidence 3689999999999875 899999999999999 799999999999999876654320
Q ss_pred ccccCCCCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEE
Q 007647 171 FRYFPDSEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNV 250 (595)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl~~ 250 (595)
..|+++++. + ++.|+++|+|.|++ .++||||+++
T Consensus 428 ------------------------------------~~~~i~~~~-~-----~n~G~~~a~n~g~~----~a~g~~i~~l 461 (625)
T 2z86_A 428 ------------------------------------NHPRVRFIS-Q-----KNKGIGSASNTAVR----LCRGFYIGQL 461 (625)
T ss_dssp ------------------------------------TCTTEEEEE-E-----CCCCHHHHHHHHHH----HCCSSEEEEC
T ss_pred ------------------------------------hCCcEEEEe-C-----CCCCHHHHHHHHHH----hcCCCEEEEE
Confidence 235778885 3 24689999999999 6899999999
Q ss_pred cCCCCCCchHHHHHHHhhhcCCCCCCcEEEEeCCccccCchhh-hHhhHhhhhhhhcccCCceeccccceeehhhhhccc
Q 007647 251 DCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYDRPEN-LCILNEYIGKGIVGIQGPFYQGTGTFHRRDVVYGLC 329 (595)
Q Consensus 251 DAD~~~~~pd~L~~~v~~f~d~~~d~~vg~VQ~pq~f~d~~~~-~~~f~~~~~~g~~~~~~~~~~Gtg~~~rr~al~g~~ 329 (595)
|+|.++ +|++|.+++..|. .++++++|.+...+.|.-++ ....+.......+.......+|++.++||+++
T Consensus 462 d~D~~~-~~~~l~~~~~~~~---~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~---- 533 (625)
T 2z86_A 462 DSDDFL-EPDAVELCLDEFR---KDLSLACVYTTNRNIDREGNLISNGYNWPIYSREKLTSAMICHHFRMFTARAW---- 533 (625)
T ss_dssp CTTCEE-CTTHHHHHHHHHH---HCTTCSEEEEEEEEECTTSCEEEECCCCSSCCHHHHTTSCCCCSCEEEEHHHH----
T ss_pred CCCccc-ChhHHHHHHHHHH---hCCCeeEEEeeeEEECCCCCEeccCcccccCCHHHHhhcccCCceEEEEHHHH----
Confidence 999997 7999999998885 46778888765443322111 00000000000111222344566666776655
Q ss_pred chhhhhccchhHHHHHHhhCCcHHHHHHHHHhhcCCcCCCCCchhhhHHHHhHhhccccccCCCcCccccCCCC-Cccch
Q 007647 330 LDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYG-ATAED 408 (595)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~g~s~~f~~s~~~~~r~~~~~~~~~~~~~~~~~~~vg~c~ye~~~~w~~~~G~~~~-~itED 408 (595)
+++| ||++. ...||
T Consensus 534 ---------------------------------------------------~~~g--------------gfd~~~~~~eD 548 (625)
T 2z86_A 534 ---------------------------------------------------NLTE--------------GFNESISNAVD 548 (625)
T ss_dssp ---------------------------------------------------TTTT--------------CCCSSCSSCHH
T ss_pred ---------------------------------------------------HHhC--------------CCCCccCChHH
Confidence 2455 67665 46799
Q ss_pred HHHHHHHHhCCcEEEEeCCCCccee---ccCCCCHHHHHHHHHHhhhhhHHHH
Q 007647 409 NLTGLVIHSKGWRSGYCLPIPHAFL---GCASPSGPAGMRQQKRWATGLLEIL 458 (595)
Q Consensus 409 ~~t~~~l~~~Gwr~~y~~~~~~~~~---g~aP~tl~~~~~Qr~RWa~G~~q~~ 458 (595)
.++.+|+..+| ++.|++. +... .....+.+...+|+.+|.+...+.+
T Consensus 549 ~dl~~r~~~~g-~~~~~~~--~~~~~r~h~~~~s~~~~~~~~~~~~~~~~~~l 598 (625)
T 2z86_A 549 YDMYLKLSEVG-PFKHINK--ICYNRVLHGENTSIKKLDIQKENHFKVVNESL 598 (625)
T ss_dssp HHHHHHHTTTS-CEEEEEE--EEEEEECC----CCSSHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhC-CEEEeCC--cEEEEEECCCccchhhHHHHHHHHHHHHHHHH
Confidence 99999999999 8899862 3332 3345566777788887766554444
No 7
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=99.79 E-value=9.3e-19 Score=196.37 Aligned_cols=120 Identities=13% Similarity=0.053 Sum_probs=98.1
Q ss_pred cCCCCCeEEEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcch-HHHHHHHHHhhhhhhhhhhhccccc
Q 007647 89 IQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLN-FYSLVEASKFAKLWVPFCKKYNVQI 167 (595)
Q Consensus 89 ~~~~P~V~V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T-~~~l~e~~~~a~~w~p~c~~~gv~~ 167 (595)
++..|.|+|+||+||| +.+.+.+||.|+++++||...++|+|+||||+|.| .+.+++.++
T Consensus 108 ~~~~P~vSVIIp~yNe---~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l~~~~~---------------- 168 (570)
T 2d7i_A 108 LETLPNTSIIIPFHNE---GWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYMA---------------- 168 (570)
T ss_dssp ESSCCCEEEEEEESSC---CHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHHHHHHT----------------
T ss_pred CCCCCCeEEEEEECCC---CHHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHHHHHHHHHH----------------
Confidence 3568999999999994 45599999999999999954569999999999998 655543210
Q ss_pred CCcccccCCCCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEE
Q 007647 168 RAPFRYFPDSEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFM 247 (595)
Q Consensus 168 r~~~~~~~~~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~v 247 (595)
.+|+++++..++ +.|+++|+|.|++ .+++|+|
T Consensus 169 ---------------------------------------~~~~v~vi~~~~-----n~G~~~A~N~G~~----~A~gd~i 200 (570)
T 2d7i_A 169 ---------------------------------------LFPSVRILRTKK-----REGLIRTRMLGAS----VATGDVI 200 (570)
T ss_dssp ---------------------------------------TSTTEEEEECSS-----CCCHHHHHHHHHH----HCCSSEE
T ss_pred ---------------------------------------hCCeEEEEECCC-----CCCHHHHHHHHHH----hcCCCEE
Confidence 236788887653 4689999999999 6899999
Q ss_pred EEEcCCCCCCchHHHHHHHhhhcCCCCCCcEE
Q 007647 248 LNVDCDMYANNPEIVLQAMCLHLGSKNENEFA 279 (595)
Q Consensus 248 l~~DAD~~~~~pd~L~~~v~~f~d~~~d~~vg 279 (595)
+++|+|.++ +|++|.+++..+. .+++++
T Consensus 201 ~fLD~D~~~-~p~~L~~ll~~l~---~~~~~v 228 (570)
T 2d7i_A 201 TFLDSHCEA-NVNWLPPLLDRIA---RNRKTI 228 (570)
T ss_dssp EECCSSEEE-CTTCSHHHHHHHH---HCTTEE
T ss_pred EEEcCCccc-cccHHHHHHHHHH---hCCCEE
Confidence 999999998 7999999999986 345553
No 8
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=99.76 E-value=2e-18 Score=190.27 Aligned_cols=111 Identities=14% Similarity=0.087 Sum_probs=92.2
Q ss_pred cCCCCCeEEEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhcccccC
Q 007647 89 IQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIR 168 (595)
Q Consensus 89 ~~~~P~V~V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~r 168 (595)
+...|.|+|+||+|| |+...+.++|.|+++++||...+||+|+||||+|.|...+.
T Consensus 62 ~~~~p~vSVIIp~yN---~~~~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~~~~~--------------------- 117 (501)
T 2ffu_A 62 RVDLPATSVVITFHN---EARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDGALL--------------------- 117 (501)
T ss_dssp CSSCCCEEEEEEESS---CCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHHHHGG---------------------
T ss_pred CcCCCCEEEEEEeCc---CcHHHHHHHHHHHHhhCchhhceeEEEEECCCCchHHHHHH---------------------
Confidence 456899999999999 44448999999999999995557999999999998752210
Q ss_pred CcccccCCCCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEE
Q 007647 169 APFRYFPDSEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFML 248 (595)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl 248 (595)
...|+++++..++ +.|+++|+|.|++ .++||+|+
T Consensus 118 -------------------------------------~~~~~v~vi~~~~-----n~G~~~A~N~G~~----~A~gd~i~ 151 (501)
T 2ffu_A 118 -------------------------------------GKIEKVRVLRNDR-----REGLMRSRVRGAD----AAQAKVLT 151 (501)
T ss_dssp -------------------------------------GGBTTEEEEECSS-----CCHHHHHHHHHHH----HCCSSEEE
T ss_pred -------------------------------------hcCCCEEEEECCC-----CcCHHHHHHHHHH----hcCCCEEE
Confidence 0135788887653 4689999999999 68999999
Q ss_pred EEcCCCCCCchHHHHHHHhhhc
Q 007647 249 NVDCDMYANNPEIVLQAMCLHL 270 (595)
Q Consensus 249 ~~DAD~~~~~pd~L~~~v~~f~ 270 (595)
++|+|.++ +|++|.+++..+.
T Consensus 152 flD~D~~~-~p~~L~~ll~~~~ 172 (501)
T 2ffu_A 152 FLDSHCEC-NEHWLEPLLERVA 172 (501)
T ss_dssp ECCSSEEE-CTTCHHHHHHHHH
T ss_pred EECCCccc-CccHHHHHHHHHH
Confidence 99999997 7999999999885
No 9
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=99.70 E-value=5.1e-17 Score=169.73 Aligned_cols=124 Identities=13% Similarity=0.040 Sum_probs=94.9
Q ss_pred CCCCCeEEEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhcccccCC
Q 007647 90 QELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRA 169 (595)
Q Consensus 90 ~~~P~V~V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~r~ 169 (595)
...|.|+|+||+|||++ .+.++|.++++++||. ..+|+|+||||+|.|.+.+++. +.+
T Consensus 45 ~~~~~vSViIp~yN~~~----~l~~~l~sl~~q~~~~-~~eiivVDdgS~D~t~~~~~~~--------------~~~--- 102 (329)
T 3ckj_A 45 KAGRTISVVLPALDEED----TIGSVIDSISPLVDGL-VDELIVLDSGSTDDTEIRAVAA--------------GAR--- 102 (329)
T ss_dssp TTTCCEEEEEEESSCTT----THHHHHHHHGGGBTTT-BSEEEEEECSCCSSHHHHHHHT--------------TCE---
T ss_pred ccCCcEEEEEeeCCCHH----HHHHHHHHHHHhhCCC-CcEEEEEeCCCCchHHHHHHHh--------------hhh---
Confidence 34689999999999875 8999999999999993 4899999999999988665431 110
Q ss_pred cccccCCCCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEE
Q 007647 170 PFRYFPDSEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLN 249 (595)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl~ 249 (595)
+ ...++ ++.+. ..+.||++|+|.|++ .++||||++
T Consensus 103 ---~-----------------~~~~~-----------------~~~~~----~~n~G~~~a~n~g~~----~a~gd~i~~ 137 (329)
T 3ckj_A 103 ---V-----------------VSREQ-----------------ALPEV----PIRPGKGEALWRSLA----ASRGDIVVF 137 (329)
T ss_dssp ---E-----------------EEHHH-----------------HCTTS----CCCCSHHHHHHHHHH----HCCCSEEEE
T ss_pred ---h-----------------cccee-----------------eeccC----CCCCCHHHHHHHHHH----hCCCCEEEE
Confidence 0 00111 11111 135789999999999 689999999
Q ss_pred EcCCCC-CCchHHHHHHHhhhcCCCCCCcEEEEeCC
Q 007647 250 VDCDMY-ANNPEIVLQAMCLHLGSKNENEFAFIQSP 284 (595)
Q Consensus 250 ~DAD~~-~~~pd~L~~~v~~f~d~~~d~~vg~VQ~p 284 (595)
+|+|.+ + +|++|.+++..+. .++++++|++.
T Consensus 138 lD~D~~~~-~p~~l~~l~~~l~---~~~~~~~v~g~ 169 (329)
T 3ckj_A 138 VDSDLINP-HPMFVPWLVGPLL---TGDGVHLVKSF 169 (329)
T ss_dssp CCTTEESC-CTTHHHHHHHHHH---SCSSCCEEEEE
T ss_pred ECCCCCCc-ChHHHHHHHHHHH---hCCCccEEEEE
Confidence 999998 7 7999999998865 56778877653
No 10
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=99.64 E-value=4.8e-16 Score=176.83 Aligned_cols=125 Identities=14% Similarity=0.090 Sum_probs=91.8
Q ss_pred CCCCeEEEEeccCCCCCChhHHHHHHHHHHhcCCCCC-CeEEEEEeCCCCcch-HHHHHHHHHhhhhhhhhhhhcccccC
Q 007647 91 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVH-KLACYVSDDACSPLN-FYSLVEASKFAKLWVPFCKKYNVQIR 168 (595)
Q Consensus 91 ~~P~V~V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~-kl~V~v~DDg~~d~T-~~~l~e~~~~a~~w~p~c~~~gv~~r 168 (595)
..|+|+|+||+||+++ .+.++|.++++++|+.+ ..+|+|+||||+|.+ ...+.+..+ +
T Consensus 178 ~~pkVSVVIptYN~~~----~L~~~L~SL~~qt~~~~~~~EIIVVDNgStD~s~~~~~~e~~~----------~------ 237 (657)
T 4fix_A 178 GTANIAVGIPTFNRPA----DCVNALRELTADPLVDQVIGAVIVPDQGERKVRDHPDFPAAAA----------R------ 237 (657)
T ss_dssp SCCCEEEECCBSSCHH----HHHHHHHHHTTSHHHHTTEEEEEEEECSSSCGGGSTTHHHHHH----------H------
T ss_pred CCCeEEEEEEecCCHH----HHHHHHHHHHcCccccCCCCEEEEEECcCCCccchHHHHHHHH----------h------
Confidence 3589999999999764 89999999999998544 449999999999842 111111110 0
Q ss_pred CcccccCCCCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEE
Q 007647 169 APFRYFPDSEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFML 248 (595)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl 248 (595)
..|+++++..+ +.|.|+|.|.|++...-..++|||+
T Consensus 238 --------------------------------------~~~~I~vI~~~------N~G~a~a~N~Gl~~A~g~~~~dyIl 273 (657)
T 4fix_A 238 --------------------------------------LGSRLSIHDQP------NLGGSGGYSRVMYEALKNTDCQQIL 273 (657)
T ss_dssp --------------------------------------HGGGEEEEECC------CCHHHHHHHHHHHHHHHHCCCSEEE
T ss_pred --------------------------------------cCCCEEEEECC------CCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 01467888643 4689999999998421012679999
Q ss_pred EEcCCCCCCchHHHHHHHhhhcCCCCCCcEEEEeC
Q 007647 249 NVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQS 283 (595)
Q Consensus 249 ~~DAD~~~~~pd~L~~~v~~f~d~~~d~~vg~VQ~ 283 (595)
++|+|.++ +|++|.+++.++. .++++++|+.
T Consensus 274 fLD~D~~~-~pd~L~~ll~~l~---~~~~~~~vg~ 304 (657)
T 4fix_A 274 FMDDDIRL-EPDSILRVLAMHR---FAKAPMLVGG 304 (657)
T ss_dssp EECSSEEE-CTHHHHHHHHHHH---HBSSCCEEEE
T ss_pred EECCCCcc-ChhHHHHHHHHHH---hCCCcEEEEe
Confidence 99999997 7999999999885 4566676653
No 11
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=99.61 E-value=4.2e-17 Score=187.86 Aligned_cols=107 Identities=16% Similarity=0.151 Sum_probs=0.0
Q ss_pred CCeEEEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhcccccCCccc
Q 007647 93 PPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFR 172 (595)
Q Consensus 93 P~V~V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~r~~~~ 172 (595)
|.|+|+||+||+++ .+.++|.|+++++|| .+||+|+||||+|.|.+.+++.++ ++
T Consensus 2 p~vSVIIp~yN~~~----~L~~~L~Sll~Qt~~--~~EIIVVDDgStD~t~~il~~~~~----------~~--------- 56 (729)
T 3l7i_A 2 NKLTIIVTYYNAEE----YITGCLESIKQQRTQ--DFNLIIVNDGSTDQSKKLMDEAIK----------DY--------- 56 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ceEEEEEEcCCCHH----HHHHHHHHHHhCCCC--CeEEEEEECCCCCcHHHHHHHHHH----------hC---------
Confidence 78999999999875 999999999999999 889999999999998876654221 10
Q ss_pred ccCCCCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEEcC
Q 007647 173 YFPDSEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDC 252 (595)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl~~DA 252 (595)
-++++++..++ +.|+++|+|.|++ .++||||+++|+
T Consensus 57 -----------------------------------~~~i~~i~~~~-----n~G~~~arN~gi~----~A~gdyI~flD~ 92 (729)
T 3l7i_A 57 -----------------------------------DKNIRFIDLDE-----NSGHAHARNIALE----EVETPYFMFLDA 92 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -----------------------------------CCCEEEEECCC-----CCCHHHHHHHHHH----hccCCEEEEECC
Confidence 13566776543 4689999999999 789999999999
Q ss_pred CCCCCchHHHHHHHhhh
Q 007647 253 DMYANNPEIVLQAMCLH 269 (595)
Q Consensus 253 D~~~~~pd~L~~~v~~f 269 (595)
|.++ .|++|.+++..+
T Consensus 93 Dd~~-~p~~l~~l~~~l 108 (729)
T 3l7i_A 93 DDEL-ASYAITFYLEKF 108 (729)
T ss_dssp -----------------
T ss_pred CCCC-ChhHHHHHHHHh
Confidence 9998 799999999887
No 12
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=99.56 E-value=2.2e-14 Score=153.40 Aligned_cols=123 Identities=13% Similarity=0.102 Sum_probs=91.7
Q ss_pred CCCCCeEEEEeccCCCCCChhHHHHHHHHHHh--cCCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhccccc
Q 007647 90 QELPPVDMFVTTADAELEPPIITVNTVLSLLA--VDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQI 167 (595)
Q Consensus 90 ~~~P~V~V~IptynE~~Ep~~vv~~tl~s~l~--ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~ 167 (595)
...|.|+|+||+|||++ .+.++|.++.+ .+||. ..+|+|+||||+|.|.+.+++. +.+.
T Consensus 91 ~~~p~vSVVIP~yNe~~----~l~~~l~sl~~~l~~~~~-~~EIIVVDDgStD~T~~i~~~~--------------~~~v 151 (387)
T 3f1y_A 91 ELGLTVSAVLPSRNVAD----TVGGIIDEIHALNERAPL-IDQILVVDADSEDGTAGVAASH--------------GAEV 151 (387)
T ss_dssp HHTCCEEEEEEESSCTT----THHHHHHHHHHHHHHSCC-CSEEEEEECSCSSSHHHHHHHT--------------TCEE
T ss_pred cCCCeEEEEEEcCCCHH----HHHHHHHHHHHHHhcCCC-CeEEEEEcCcCCccHHHHHHHh--------------Cchh
Confidence 34699999999999875 89999999987 47764 4799999999999998665432 1100
Q ss_pred CCcccccCCCCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEE
Q 007647 168 RAPFRYFPDSEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFM 247 (595)
Q Consensus 168 r~~~~~~~~~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~v 247 (595)
.. + .++++..+ .+.||++|+|.|++ .++||+|
T Consensus 152 ------~~----------------~-----------------~~~~i~~~-----~n~G~g~A~n~G~~----~A~gd~i 183 (387)
T 3f1y_A 152 ------YS----------------E-----------------NELMSGYG-----DAHGKGDAMWRALS----VTRGDLV 183 (387)
T ss_dssp ------EE----------------G-----------------GGTTGGGC-----SCCSHHHHHHHHTT----TCCSSEE
T ss_pred ------cc----------------c-----------------ceeEecCC-----ccCCHHHHHHHHHH----hcCCCEE
Confidence 00 0 00011122 35689999999999 7899999
Q ss_pred EEEcCCCC-CCchHHHHHHHhhhcCCCCCCcEEEEeC
Q 007647 248 LNVDCDMY-ANNPEIVLQAMCLHLGSKNENEFAFIQS 283 (595)
Q Consensus 248 l~~DAD~~-~~~pd~L~~~v~~f~d~~~d~~vg~VQ~ 283 (595)
+++|||.. + +|++|.+++..+. .++++++|.+
T Consensus 184 ~~lDaD~~~~-~p~~L~~l~~~l~---~~p~~d~v~G 216 (387)
T 3f1y_A 184 LYIDADTRDF-RPQLAYGVLGPVL---EVPGVRFVKA 216 (387)
T ss_dssp EECCTTCSSC-CTHHHHTTHHHHH---HSTTCCEEEE
T ss_pred EEEcCCCCcC-CHHHHHHHHHHHH---HCCCceEEEE
Confidence 99999999 7 7999999998885 3556666654
No 13
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...
Probab=99.55 E-value=7.1e-15 Score=151.10 Aligned_cols=181 Identities=11% Similarity=-0.034 Sum_probs=121.0
Q ss_pred CCCCeEEEEeccCCCCCChhHHHHHHHHHH---hcCCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhccccc
Q 007647 91 ELPPVDMFVTTADAELEPPIITVNTVLSLL---AVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQI 167 (595)
Q Consensus 91 ~~P~V~V~IptynE~~Ep~~vv~~tl~s~l---~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~ 167 (595)
..|.|+|+||+||+++ .+.++|.+++ ++.|+ .++|+|+||++++
T Consensus 63 ~~~~VSIIIP~yN~~~----~L~~~L~sl~~~l~q~~~--~~EIiVVdds~d~--------------------------- 109 (287)
T 2fy7_A 63 SPHKVAIIIPFRNRQE----HLKYWLYYLHPVLQRQQL--DYGIYVINQAGDT--------------------------- 109 (287)
T ss_dssp CSCEEEEEEEESSCHH----HHHHHHHHHHHHHHHTTC--EEEEEEEEECSSS---------------------------
T ss_pred cCCcEEEEEeeCCCHH----HHHHHHHHHHHHHHHhcC--CceEEEEEeCCCC---------------------------
Confidence 3589999999999765 8999999998 68888 8999999994321
Q ss_pred CCcccccCCCCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHH----HhcCCCCC
Q 007647 168 RAPFRYFPDSEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLT----RVSGLMTN 243 (595)
Q Consensus 168 r~~~~~~~~~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l----~~~~~~~~ 243 (595)
.-+||.++|.|+ + .++
T Consensus 110 --------------------------------------------------------~f~~a~a~N~G~~~al~----~A~ 129 (287)
T 2fy7_A 110 --------------------------------------------------------IFNRAKLLNVGFQEALK----DYD 129 (287)
T ss_dssp --------------------------------------------------------CCCHHHHHHHHHHHHHH----HSC
T ss_pred --------------------------------------------------------ccchhhhhhhHHHHHHH----hCC
Confidence 014788899988 6 589
Q ss_pred CCEEEEEcCCCCCCchHHHHHHHhhhcCCCCCCcEEEEeCCccccCchhhhHhhHhhhhhhhcccCCceeccccceeehh
Q 007647 244 APFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYDRPENLCILNEYIGKGIVGIQGPFYQGTGTFHRRD 323 (595)
Q Consensus 244 ~d~vl~~DAD~~~~~pd~L~~~v~~f~d~~~d~~vg~VQ~pq~f~d~~~~~~~f~~~~~~g~~~~~~~~~~Gtg~~~rr~ 323 (595)
+|||+++|+|.++ .|+.+. +... ..++. +. .+.+.+. +. ..+ ..+.|.+.++||+
T Consensus 130 gd~i~flD~D~i~-~~d~~~----~~~~--~~p~~--~~---~~~~~~~-----~~------~~~--~~~~G~~~~~rr~ 184 (287)
T 2fy7_A 130 YTCFVFSDVDLIP-MNDHNA----YRCF--SQPRH--IS---VAMDKFG-----FS------LPY--VQYFGGVSALSKQ 184 (287)
T ss_dssp CCEEEEECTTEEE-SBTTSC----CSCC--SSCEE--CC---CEEGGGT-----TS------CSS--TTCCCSEEEEEHH
T ss_pred CCEEEEECCCccc-CCCcce----EecC--CCCce--EE---Eeecccc-----cC------CCc--CceeeeEEEEEHH
Confidence 9999999999997 788521 1111 11211 00 0001100 00 001 1234555566666
Q ss_pred hhhcccchhhhhccchhHHHHHHhhCCcHHHHHHHHHhhcCCcCCCCCchhhhHHHHhHhhccccccCCCcCccccCCCC
Q 007647 324 VVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYG 403 (595)
Q Consensus 324 al~g~~~~~~~~~~~~~~~~~~~~~g~s~~f~~s~~~~~r~~~~~~~~~~~~~~~~~~~vg~c~ye~~~~w~~~~G~~~~ 403 (595)
++ ++|| ||++.
T Consensus 185 ~f-------------------------------------------------------~~vg--------------GFde~ 195 (287)
T 2fy7_A 185 QF-------------------------------------------------------LTIN--------------GFPNN 195 (287)
T ss_dssp HH-------------------------------------------------------HHTT--------------SCCSC
T ss_pred HH-------------------------------------------------------HHcC--------------CCCcc
Confidence 55 3666 67765
Q ss_pred Cc---cchHHHHHHHHhCCcEEEEeCCCCc----------ceeccCCCCHHHHHHHHHHhhhhhHHHH
Q 007647 404 AT---AEDNLTGLVIHSKGWRSGYCLPIPH----------AFLGCASPSGPAGMRQQKRWATGLLEIL 458 (595)
Q Consensus 404 ~i---tED~~t~~~l~~~Gwr~~y~~~~~~----------~~~g~aP~tl~~~~~Qr~RWa~G~~q~~ 458 (595)
.. .||.++..|++.+||++.+.++... ......|+.++.+.+||.||+++++..+
T Consensus 196 ~~g~g~ED~Dl~~Rl~~~G~~i~~~~~~~~~~~~i~H~~~~~~~~n~~~~~~l~~~~~~~~~~Gl~~~ 263 (287)
T 2fy7_A 196 YWGWGGEDDDIFNRLVFRGMSISRPNAVVGTTRHIRHSRDKKNEPNPQRFDRIAHTKETMLSDGLNSL 263 (287)
T ss_dssp CSSCSCHHHHHHHHHHHTTCCCBCCCTTTCEEEECC---------CCCCCCCHHHHHHHTTTSSGGGC
T ss_pred ccccccchHHHHHHHHHcCCeEEecCcccceeEEEecCCCcccCCCHHHHHHHhhcccEEcCCCcccC
Confidence 43 5999999999999998874321000 1124578999999999999999999876
No 14
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=99.29 E-value=1.4e-11 Score=123.38 Aligned_cols=98 Identities=4% Similarity=-0.116 Sum_probs=75.1
Q ss_pred CCCCeEEEEeccCCCCCChhHHHHHHHHHHh-cCCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhcccccCC
Q 007647 91 ELPPVDMFVTTADAELEPPIITVNTVLSLLA-VDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRA 169 (595)
Q Consensus 91 ~~P~V~V~IptynE~~Ep~~vv~~tl~s~l~-ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~r~ 169 (595)
..|.|+| ||+||+++ .+.++|+|+.+ +..+.. +||+|+||||+|.
T Consensus 14 ~~~~iSI-I~~yN~~~----~l~~~l~sl~~sl~~q~~-~EiIVVDn~s~d~---------------------------- 59 (249)
T 2nxv_A 14 STLMFSV-CSLVRDQA----KYDRLLESFERFGFTPDK-AEFLAADNREGNQ---------------------------- 59 (249)
T ss_dssp CCCSEEE-EEEESCHH----HHHHHHHHHHHTTCCTTT-EEEEEEECTTSCS----------------------------
T ss_pred CcceEEE-EEeeCCHH----HHHHHHHHHHHhccCCCc-EEEEEEECCCCCc----------------------------
Confidence 4578997 57799653 89999998874 333422 8999999998761
Q ss_pred cccccCCCCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEE
Q 007647 170 PFRYFPDSEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLN 249 (595)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl~ 249 (595)
.+.|.|+|.|++ .++|||+++
T Consensus 60 -------------------------------------------------------~g~a~a~N~Gi~----~A~g~yl~f 80 (249)
T 2nxv_A 60 -------------------------------------------------------FHGFSWHKQMLP----RCKGRYVIF 80 (249)
T ss_dssp -------------------------------------------------------CCTTTHHHHHGG----GCCSSEEEE
T ss_pred -------------------------------------------------------ccHHHHHHHHHH----hcCCCEEEE
Confidence 135678999999 789999999
Q ss_pred EcCCCCCCchHHHHHHHhhhcCC-CCCCcEEEEe
Q 007647 250 VDCDMYANNPEIVLQAMCLHLGS-KNENEFAFIQ 282 (595)
Q Consensus 250 ~DAD~~~~~pd~L~~~v~~f~d~-~~d~~vg~VQ 282 (595)
+|+|.++ +|++|.+++..+.+. ..++++|+|.
T Consensus 81 ln~D~~~-~~~~l~~l~~~~~~~~~~~~~vg~vg 113 (249)
T 2nxv_A 81 CHEDVEL-VDRGYDDLVAAIEALEEADPKWLVAG 113 (249)
T ss_dssp EETTEEC-SSCCHHHHHHHHHHHHHHCTTEEEEE
T ss_pred ECCCccc-CccHHHHHHHHHHhcccCCCCeeEEe
Confidence 9999998 799999999888410 0047888764
No 15
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=99.07 E-value=2.3e-09 Score=114.69 Aligned_cols=42 Identities=19% Similarity=0.065 Sum_probs=36.6
Q ss_pred CCChHHHHHHHH----HhcCCCCCCCEEEEEcCCCC-CCchHHHHHHHhhhc
Q 007647 224 HHYKAGAMNVLT----RVSGLMTNAPFMLNVDCDMY-ANNPEIVLQAMCLHL 270 (595)
Q Consensus 224 ~~~KAgaLN~~l----~~~~~~~~~d~vl~~DAD~~-~~~pd~L~~~v~~f~ 270 (595)
+.||++|++.|+ + .++||+|+++|||.. . +|+.+.+++..+.
T Consensus 73 n~GkG~Al~~G~~~Al~----~a~gd~vv~mDADlq~~-~P~~i~~Ll~~l~ 119 (397)
T 2bo4_A 73 RPGKGDGMNTALRYFLE----ETQWERIHFYDADITSF-GPDWITKAEEAAD 119 (397)
T ss_dssp SSSHHHHHHHHHHHHHH----HCCCSEEEECCTTCSSC-CHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHH----hCCCCEEEEEcCCCCCC-CHHHHHHHHHHHH
Confidence 479999999999 6 589999999999996 5 5999999988763
No 16
>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A*
Probab=98.60 E-value=1.8e-07 Score=96.97 Aligned_cols=134 Identities=16% Similarity=0.126 Sum_probs=76.6
Q ss_pred CCCCCeEEEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhcccccCC
Q 007647 90 QELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRA 169 (595)
Q Consensus 90 ~~~P~V~V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~r~ 169 (595)
+....++|+||+|||+. .++.+++++.+. +.+|+|+||||+|.|..+...+.+ ||+...-
T Consensus 50 ~i~~klSIVVPvYNEe~-------~lLesVl~qi~~--d~eIIlVdDGS~D~s~~e~dil~~-------~~~~~~~---- 109 (391)
T 2wvl_A 50 DVLEQTAIVVPTRNERL-------KLLEGVLSGIPH--EALILVASNSSPDRFQMERDLLEE-------FAHLTER---- 109 (391)
T ss_dssp HHHTTEEEEEEESSCCH-------HHHHHHHHTSCT--TSEEEEEECCCHHHHHHHHHHHHH-------HHHHTTC----
T ss_pred hHHhceEEEEeccCcHH-------HHHHHHHhcCCC--CceEEEEECCCCCChHhHHHHHHH-------HHhhccc----
Confidence 34678999999999653 369999999887 789999999999988532222211 3321100
Q ss_pred cccccCCCCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEEEeccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEE
Q 007647 170 PFRYFPDSEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLN 249 (595)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi~R~kr~~~~~~~KAgaLN~~l~~~~~~~~~d~vl~ 249 (595)
+....... .......+.+ .++|.+ -+++ +..+.||++++=.|+.... ...+|||.+
T Consensus 110 ri~viHQk------n~gls~Ar~~------------~G~~~i---l~~~--~~vR~GKGegmi~Gi~~Ak-~~~geYVgF 165 (391)
T 2wvl_A 110 PALIFHQK------DPALAEALRA------------GGYPHP---IGED--GLVRSGKAEGMILALVFAA-LSGRRYVGF 165 (391)
T ss_dssp CEEEEETT------CHHHHHHHHH------------TTCCTT---BCTT--SSBCCSHHHHHHHHHHHHH-HTTCSEEEE
T ss_pred ceEEEecc------ChHHHHHHHh------------cCcchh---hccc--ccccccchHHHHHHHHHHH-hcCCCEEEE
Confidence 00000000 0000011000 011111 1111 1245799999999998421 138999999
Q ss_pred EcCCCCCCchHHHHHHHhhh
Q 007647 250 VDCDMYANNPEIVLQAMCLH 269 (595)
Q Consensus 250 ~DAD~~~~~pd~L~~~v~~f 269 (595)
+|||..+ |....+.+..|
T Consensus 166 vDADdyi--~~~v~Eyvk~y 183 (391)
T 2wvl_A 166 IDADNYF--PGAVWEYVRAY 183 (391)
T ss_dssp CCSCBSC--HHHHHHHHHHH
T ss_pred EcCcCCC--ccCHHHHHHHH
Confidence 9999998 34444444433
No 17
>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A*
Probab=98.58 E-value=1e-07 Score=101.09 Aligned_cols=39 Identities=26% Similarity=0.135 Sum_probs=32.2
Q ss_pred CChHHHHHHHHHhcCCCC---CCCEEEEEcCCCCCCchHHHHHHHhhh
Q 007647 225 HYKAGAMNVLTRVSGLMT---NAPFMLNVDCDMYANNPEIVLQAMCLH 269 (595)
Q Consensus 225 ~~KAgaLN~~l~~~~~~~---~~d~vl~~DAD~~~~~pd~L~~~v~~f 269 (595)
.||..|+-.|+. .+ ++|+|+++|||-. .|..+.+.+.-+
T Consensus 143 ~GKG~Am~aGl~----~A~~~~gd~Vv~~DaDl~--iP~~v~~~~kgy 184 (394)
T 2zu9_A 143 SGKGEGMLVGLL----LAKAIGAEYVGFVDADNY--IPGAVNEYVKDY 184 (394)
T ss_dssp CSHHHHHHHHHH----HHHHTTCSEEEECCSCBS--CHHHHHHHHHHH
T ss_pred CChHHHHHHHHH----HHhhCCCCEEEEEeCCCC--CHHHHHHHHHHh
Confidence 499999999999 46 8999999999995 478886665443
No 18
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=98.28 E-value=2.4e-06 Score=89.52 Aligned_cols=125 Identities=16% Similarity=0.190 Sum_probs=81.5
Q ss_pred CCCeEEEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHHHHHhhhhhhhhhhhcccccCCcc
Q 007647 92 LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPF 171 (595)
Q Consensus 92 ~P~V~V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e~~~~a~~w~p~c~~~gv~~r~~~ 171 (595)
++.+.|+|+||| -| + +.++|+++++++.+.++.+|+|+|||+.++|.+.++ +++.+.
T Consensus 1 ~~~~pViI~~yN---Rp-~-l~~~L~sL~~~~p~~~~~~iivsdDgs~~~~~~vi~--------------~~~~~I---- 57 (343)
T 1fo8_A 1 LAVIPILVIACD---RS-T-VRRCLDKLLHYRPSAELFPIIVSQDCGHEETAQVIA--------------SYGSAV---- 57 (343)
T ss_dssp CCCCCEEEEESS---CT-T-HHHHHHHHHHHCSCTTTSCEEEEECTTCHHHHHHHH--------------TTGGGS----
T ss_pred CCcccEEEEECC---cH-H-HHHHHHHHHhcCCCcCCcEEEEEECCCCHHHHHHHH--------------HcCCce----
Confidence 356889999999 77 6 999999999999777778999999999886654332 222100
Q ss_pred cccCCCCCCCCCchhhHHHHhhhHHHhhcCCCCCCCCCcEEEE-EeccCCCCCCCCh-----H----HHHHHHHHhcCCC
Q 007647 172 RYFPDSEPSDSSSGELLQDWKNMKVISENKGGLSDEIPHLVYI-SREKRPKHPHHYK-----A----GAMNVLTRVSGLM 241 (595)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~kv~~~~~~~~~~~~p~l~yi-~R~kr~~~~~~~K-----A----gaLN~~l~~~~~~ 241 (595)
.+. .+|.+..+ .+++ |.+.| | .++|.+.. .
T Consensus 58 ~~~--------------------------------~~~d~~~~~~~~~----N~g~~~y~~ia~h~~~al~~vf~----~ 97 (343)
T 1fo8_A 58 THI--------------------------------RQPDLSNIAVQPD----HRKFQGYYKIARHYRWALGQIFH----N 97 (343)
T ss_dssp EEE--------------------------------ECSCCCCCCCCTT----CGGGHHHHHHHHHHHHHHHHHHT----T
T ss_pred EEE--------------------------------EcCCccccccchh----hcCcccchhHhHHHHHHHHHHHH----h
Confidence 000 00000000 0221 21222 1 46676666 5
Q ss_pred CCCCEEEEEcCCCCCCchHHHH---HHHhhhcCCCCCCcEEEEeC
Q 007647 242 TNAPFMLNVDCDMYANNPEIVL---QAMCLHLGSKNENEFAFIQS 283 (595)
Q Consensus 242 ~~~d~vl~~DAD~~~~~pd~L~---~~v~~f~d~~~d~~vg~VQ~ 283 (595)
.++|+++++|-|+++ .|||+. +++..+. .|++|..|.+
T Consensus 98 ~~~~~vIiLEDDl~~-spdF~~y~~~~l~~y~---~D~~I~~ISa 138 (343)
T 1fo8_A 98 FNYPAAVVVEDDLEV-APDFFEYFQATYPLLK---ADPSLWCVSA 138 (343)
T ss_dssp SCCSEEEEEETTEEE-CTTHHHHHHHHHHHHH---HCTTEEEEES
T ss_pred ccCCEEEEEcCCCeE-CHHHHHHHHHHHHHhh---cCCcEEEEec
Confidence 689999999999997 899984 4444443 6788988864
No 19
>3lw6_A FI08434P, beta-4-galactosyltransferase 7; protein-Mn-UDP complex, glycosyltransferase; HET: UDP; 1.81A {Drosophila melanogaster}
Probab=90.04 E-value=0.63 Score=46.79 Aligned_cols=53 Identities=17% Similarity=0.004 Sum_probs=36.8
Q ss_pred cchHHHHHHHHhCCcEEEEeCCC---C-ccee---------ccCCCCHHHHHHHHHHhhhhhHHHH
Q 007647 406 AEDNLTGLVIHSKGWRSGYCLPI---P-HAFL---------GCASPSGPAGMRQQKRWATGLLEIL 458 (595)
Q Consensus 406 tED~~t~~~l~~~Gwr~~y~~~~---~-~~~~---------g~aP~tl~~~~~Qr~RWa~G~~q~~ 458 (595)
-||.++..|+...|.++.-.... + ..+. ...|..+...-.+++||..+++..+
T Consensus 185 gEDdD~~~Rl~~~G~~i~Rp~~~~~gry~m~~H~hd~~~r~rd~~k~~~~~~~~~~r~~~dGLnsl 250 (287)
T 3lw6_A 185 LEDDEFFVRIRDAGLQVTRPQNIKTGTNDTFSHIHNRYHRKRDTQKCFNQKEMTRKRDHKTGLDNV 250 (287)
T ss_dssp SHHHHHHHHHHHTTCCCBCCSSCCCCTTTSEEECCCTTTSCCCCCCCTTHHHHHTSCCSSCSGGGC
T ss_pred ccchHHHHHHHHcCCcEEcCCCccccceeEEeccccccccCCcccchhhhhhhhcEEccCCCCeee
Confidence 59999999999999987654310 0 0111 1234566677889999999988877
No 20
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=64.63 E-value=16 Score=34.77 Aligned_cols=31 Identities=13% Similarity=0.158 Sum_probs=24.9
Q ss_pred HHHHHHhcCCCCCCCEEEEEcCC---CCCCchHHHHHHH
Q 007647 231 MNVLTRVSGLMTNAPFMLNVDCD---MYANNPEIVLQAM 266 (595)
Q Consensus 231 LN~~l~~~~~~~~~d~vl~~DAD---~~~~~pd~L~~~v 266 (595)
++..++ ..++++++++||| .-. +|+.+.+++
T Consensus 45 v~~Fl~----~~~~dhllfIDAD~~~I~F-dPe~V~rLl 78 (203)
T 2c0n_A 45 LDMFLE----MKDYDTLAFLDEDVVPIEI-DFQKVEAKF 78 (203)
T ss_dssp HHHHHH----CTTCCEEEEECTTEEEEEC-CHHHHHHHH
T ss_pred HHHHHh----cCCCCEEEEEeCCCCcccc-CHHHHHHHH
Confidence 334555 5788999999999 887 699998887
No 21
>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13
Probab=59.35 E-value=37 Score=32.75 Aligned_cols=52 Identities=13% Similarity=0.070 Sum_probs=33.8
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEEcCCC-CCCchHHHHHHHhhhcCCCCCCcEEEE
Q 007647 225 HYKAGAMNVLTRVSGLMTNAPFMLNVDCDM-YANNPEIVLQAMCLHLGSKNENEFAFI 281 (595)
Q Consensus 225 ~~KAgaLN~~l~~~~~~~~~d~vl~~DAD~-~~~~pd~L~~~v~~f~d~~~d~~vg~V 281 (595)
.|.+++ -.+++..+ ..+.|.++++++|+ .+ +++.+++++..+.+ .+.+++.+
T Consensus 74 ~Gt~~~-~~~~~~l~-~~~~d~vlv~~gD~Pli-~~~~i~~l~~~~~~--~~~~~~~~ 126 (252)
T 3oam_A 74 SGTERL-AEVVAKMA-IPADHIVVNVQGDEPLI-PPAIIRQVADNLAA--CSAPMATL 126 (252)
T ss_dssp SHHHHH-HHHHHHTT-CCTTSEEEECCTTCTTC-CHHHHHHHHHHHHH--SSCSEEEE
T ss_pred CcHHHH-HHHHHhcC-cCCCCEEEEEeCCeeec-CHHHHHHHHHHHHh--cCCCEEEE
Confidence 466664 44445321 13679999999998 44 68999999988753 23345544
No 22
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A*
Probab=58.53 E-value=45 Score=32.69 Aligned_cols=55 Identities=11% Similarity=0.043 Sum_probs=36.2
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEEcCCCCCCchHHHHHHHhhhcCCCCCCcEEEEeC
Q 007647 225 HYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQS 283 (595)
Q Consensus 225 ~~KAgaLN~~l~~~~~~~~~d~vl~~DAD~~~~~pd~L~~~v~~f~d~~~d~~vg~VQ~ 283 (595)
.|.++ +..+++... ..+.|+++++++|+-+-+++.+++++..+.+ .+.+++.+..
T Consensus 90 ~Gt~~-i~~~~~~l~-~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~--~~~~~~~~~~ 144 (264)
T 3k8d_A 90 SGTER-LAEVVEKCA-FSDDTVIVNVQGDEPMIPATIIRQVADNLAQ--RQVGMATLAV 144 (264)
T ss_dssp SHHHH-HHHHHHHHT-CCTTCEEEEECTTCTTCCHHHHHHHHHHHHT--SSCSEEEEEE
T ss_pred CCHHH-HHHHHHHhc-cCCCCEEEEEcCCcccCCHHHHHHHHHHHhh--cCCCEEEEEE
Confidence 45555 666665422 2467999999999933369999999988853 2344554443
No 23
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0
Probab=48.53 E-value=91 Score=30.28 Aligned_cols=44 Identities=7% Similarity=-0.027 Sum_probs=31.4
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEEcCCCCCCchHHHHHHHhhhc
Q 007647 225 HYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHL 270 (595)
Q Consensus 225 ~~KAgaLN~~l~~~~~~~~~d~vl~~DAD~~~~~pd~L~~~v~~f~ 270 (595)
.|.++ +..+++..+ ..+.|.++++++|+-+-+++.+++++..+.
T Consensus 81 ~Gt~~-i~~a~~~l~-~~~~d~vlv~~gD~Pli~~~~i~~li~~~~ 124 (256)
T 3tqd_A 81 SGTER-IAEAAVALG-FEDDEIIVCLQGDEPLIPPDAIRKLAEDLD 124 (256)
T ss_dssp SHHHH-HHHHHHHTT-CCTTCEEEEECTTCCCCCHHHHHHHHHHHH
T ss_pred CcHHH-HHHHHHHhC-cCCCCEEEEEeCCcccCCHHHHHHHHHHHH
Confidence 45555 666666422 136799999999993226899999998875
No 24
>2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A
Probab=47.59 E-value=51 Score=29.75 Aligned_cols=41 Identities=12% Similarity=0.015 Sum_probs=30.9
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEEcCCC-CCCchHHHHHHHhh
Q 007647 225 HYKAGAMNVLTRVSGLMTNAPFMLNVDCDM-YANNPEIVLQAMCL 268 (595)
Q Consensus 225 ~~KAgaLN~~l~~~~~~~~~d~vl~~DAD~-~~~~pd~L~~~v~~ 268 (595)
.|-++++-.|++... .+.+.+++++||+ .+ +++.+++++..
T Consensus 79 ~g~~~~i~~al~~~~--~~~~~vlv~~~D~P~~-~~~~i~~l~~~ 120 (197)
T 2wee_A 79 RGCAASLRVALARVH--PRATGIVLMLGDQPQV-APATLRRIIDV 120 (197)
T ss_dssp -CCHHHHHHHHTTSC--TTEEEEEEEETTCTTC-CHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHhc--ccCCeEEEEeCCcCCC-CHHHHHHHHhh
Confidence 467889999988311 2568999999999 44 68888888765
No 25
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=45.56 E-value=48 Score=34.61 Aligned_cols=43 Identities=9% Similarity=0.040 Sum_probs=34.0
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEEcCCC-CCCchHHHHHHHhhhc
Q 007647 224 HHYKAGAMNVLTRVSGLMTNAPFMLNVDCDM-YANNPEIVLQAMCLHL 270 (595)
Q Consensus 224 ~~~KAgaLN~~l~~~~~~~~~d~vl~~DAD~-~~~~pd~L~~~v~~f~ 270 (595)
..|-++++-.+++. ..+.|.+++++||+ .+ .++.+++++..+.
T Consensus 82 ~~g~~~~i~~~~~~---~~~~~~~lv~~~D~P~i-~~~~i~~l~~~~~ 125 (459)
T 4fce_A 82 QLGTGHAMQQAAPH---FADDEDILMLYGDVPLI-SVDTLQRLLAAKP 125 (459)
T ss_dssp CCCHHHHHHHHGGG---SCTTSEEEEEETTCTTC-CHHHHHHHHHHCC
T ss_pred CCCcHHHHHHHHHh---cCCCCcEEEEeCCcccC-CHHHHHHHHHHHh
Confidence 45778999999884 23468999999999 44 5899999988763
No 26
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A*
Probab=43.71 E-value=1.1e+02 Score=30.07 Aligned_cols=27 Identities=30% Similarity=0.466 Sum_probs=23.8
Q ss_pred CCCCEEEEEcCCCCCCchHHHHHHHhhh
Q 007647 242 TNAPFMLNVDCDMYANNPEIVLQAMCLH 269 (595)
Q Consensus 242 ~~~d~vl~~DAD~~~~~pd~L~~~v~~f 269 (595)
.+.++++..|.|+++ +.+-|.+.+..+
T Consensus 92 ~~~~Wf~~~DDDtyv-~~~nL~~~L~~~ 118 (280)
T 2j0a_A 92 SGLRWFCHVDDDNYV-NPKALLQLLKTF 118 (280)
T ss_dssp HTCSEEEEEETTEEE-CHHHHHHHHTTS
T ss_pred CCCcEEEEeCCCcEE-cHHHHHHHHHhC
Confidence 589999999999999 689898888765
No 27
>2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP}
Probab=40.57 E-value=68 Score=28.89 Aligned_cols=42 Identities=7% Similarity=-0.134 Sum_probs=31.2
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEEcCCCCCCchHHHHHHHhh
Q 007647 225 HYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCL 268 (595)
Q Consensus 225 ~~KAgaLN~~l~~~~~~~~~d~vl~~DAD~~~~~pd~L~~~v~~ 268 (595)
.|-++++..|++... .+.+.+++++||+-.-+++.+++++..
T Consensus 79 ~g~~~~i~~al~~~~--~~~~~vlv~~~D~P~~~~~~i~~l~~~ 120 (199)
T 2waw_A 79 LGCSSSLKSALTWVD--PTAEGIVLMLGDQPGITASAVASLIAG 120 (199)
T ss_dssp TTCCCHHHHHHHTSC--TTCSEEEEEETTCTTCCHHHHHHHHHH
T ss_pred cCHHHHHHHHHHhhh--ccCCeEEEEeCCcccCCHHHHHHHHhh
Confidence 456778888888421 156999999999964368888888765
No 28
>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A
Probab=38.36 E-value=1.8e+02 Score=26.81 Aligned_cols=44 Identities=9% Similarity=-0.040 Sum_probs=32.4
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEEcCCCCCCchHHHHHHHhhhc
Q 007647 225 HYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHL 270 (595)
Q Consensus 225 ~~KAgaLN~~l~~~~~~~~~d~vl~~DAD~~~~~pd~L~~~v~~f~ 270 (595)
.+.+.++-.+++..+ .+.|.+++++||+-.-+++.+++++..+.
T Consensus 80 ~g~~~sv~~~l~~~~--~~~d~vlv~~~D~P~~~~~~i~~l~~~~~ 123 (228)
T 1ezi_A 80 ASSISGVIHALETIG--SNSGTVTLLQPTSPLRTGAHIREAFSLFD 123 (228)
T ss_dssp CHHHHHHHHHHHHHT--CCSEEEEECCTTCTTCCHHHHHHHHTTCC
T ss_pred CChHHHHHHHHHHhC--CCCCEEEEEcCCCCcCCHHHHHHHHHHHH
Confidence 356777888887531 24689999999984336899999887664
No 29
>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0
Probab=37.40 E-value=1.7e+02 Score=28.60 Aligned_cols=52 Identities=13% Similarity=0.073 Sum_probs=33.1
Q ss_pred CeEEEEeccCCCCCChhHHHHHHHHHHhcCCCCCCeEEEEEeCCCCcchHHHHHHH
Q 007647 94 PVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEA 149 (595)
Q Consensus 94 ~V~V~IptynE~~Ep~~vv~~tl~s~l~ldYP~~kl~V~v~DDg~~d~T~~~l~e~ 149 (595)
.+.|++++=+ .=..-+.-++.|++.-. +.+++.++|++|+-+++..+.+++.
T Consensus 5 ~i~I~~~~d~---~Y~~~~~v~i~Sl~~~~-~~~~~~~~il~~~is~~~~~~L~~~ 56 (276)
T 3tzt_A 5 ADALLLTLDE---NYIPQMKVLMTSIYINN-PGRIFDVYLIHSRISEDKLKDLGED 56 (276)
T ss_dssp CEEEEEECCG---GGHHHHHHHHHHHHHHS-TTCCEEEEEEESCCCHHHHHHHHHH
T ss_pred eEEEEEEeCH---hHHHHHHHHHHHHHHhC-CCCceEEEEEeCCCCHHHHHHHHHH
Confidence 3666655533 23335666677776543 3357999999999888766666543
No 30
>4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A
Probab=35.30 E-value=1.3e+02 Score=28.98 Aligned_cols=53 Identities=17% Similarity=0.285 Sum_probs=34.9
Q ss_pred HHHHHHHHhcCCCCCCCEEEEEcCCC-CCCchHHHHHHHhhhcCCCCCCcEEEEeCC
Q 007647 229 GAMNVLTRVSGLMTNAPFMLNVDCDM-YANNPEIVLQAMCLHLGSKNENEFAFIQSP 284 (595)
Q Consensus 229 gaLN~~l~~~~~~~~~d~vl~~DAD~-~~~~pd~L~~~v~~f~d~~~d~~vg~VQ~p 284 (595)
+++..+++..+ ..+.|+++++++|+ .+ +|+.+.+++..+.+. .+..++-+-+|
T Consensus 77 ~~i~~a~~~~~-~~~~d~vlv~~gD~Pli-~~~~i~~li~~~~~~-~~~~~at~~~~ 130 (253)
T 4fcu_A 77 DRLSEVARIKG-WDADDIIVNVQGDEPLL-PAQLVQQVAKLLVDK-PNCSMSTLCEP 130 (253)
T ss_dssp HHHHHHHHHHT-CCTTCEEEECCTTCTTC-CHHHHHHHHHHHHHC-TTCSEEEEEEE
T ss_pred HHHHHHHHhcC-cCCCCEEEEEeCCcccC-CHHHHHHHHHHHHhC-CCCCEEEEeEE
Confidence 45666776432 13569999999999 44 699999999888531 12345544433
No 31
>1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13
Probab=35.19 E-value=2.2e+02 Score=26.38 Aligned_cols=42 Identities=7% Similarity=-0.012 Sum_probs=31.5
Q ss_pred ChHHHHHHHHHhcCCCCCCCEEEEEcCCCCCCchHHHHHHHhhhc
Q 007647 226 YKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHL 270 (595)
Q Consensus 226 ~KAgaLN~~l~~~~~~~~~d~vl~~DAD~~~~~pd~L~~~v~~f~ 270 (595)
+-.+++..+++. ..+.|.++++++|+-+-+++.+++++..+.
T Consensus 80 ~~~~~v~~al~~---~~~~d~vlv~~~D~Pli~~~~i~~l~~~~~ 121 (229)
T 1qwj_A 80 TSLDAIVEFLNY---HNEVDIVGNIQATSPCLHPTDLQKVAEMIR 121 (229)
T ss_dssp CHHHHHHHHHTT---CTTCSEEEEECTTCTTCCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHh---cCCCCEEEEecCCCCcCCHHHHHHHHHHHH
Confidence 334677788873 236799999999985336899999988775
No 32
>1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A*
Probab=31.12 E-value=2.3e+02 Score=26.29 Aligned_cols=41 Identities=15% Similarity=0.065 Sum_probs=29.4
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEEcCCCCCCchHHHHHHHhhhc
Q 007647 225 HYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHL 270 (595)
Q Consensus 225 ~~KAgaLN~~l~~~~~~~~~d~vl~~DAD~~~~~pd~L~~~v~~f~ 270 (595)
.+-+++++.+-. .+.|.+++++||+-.-+++.+++++..+.
T Consensus 75 ~g~~~~~~~~~~-----~~~~~~lv~~~D~P~~~~~~i~~l~~~~~ 115 (245)
T 1h7e_A 75 SGTDRLVEVMHK-----VEADIYINLQGDEPMIRPRDVETLLQGMR 115 (245)
T ss_dssp SHHHHHHHHHHH-----SCCSEEEECCTTCTTCCHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHh-----CCCCEEEEEcCCcCcCCHHHHHHHHHHHH
Confidence 456776654433 25789999999995336899999888764
No 33
>1vgw_A 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; structural genomics, transferase; 2.35A {Neisseria gonorrhoeae} SCOP: c.68.1.13 PDB: 1vgz_A
Probab=30.96 E-value=1.9e+02 Score=26.54 Aligned_cols=46 Identities=9% Similarity=-0.113 Sum_probs=32.6
Q ss_pred CChHHHHHHHHHhcCCC---CCCCEEEEEcCCCCCCchHHHHHHHhhhc
Q 007647 225 HYKAGAMNVLTRVSGLM---TNAPFMLNVDCDMYANNPEIVLQAMCLHL 270 (595)
Q Consensus 225 ~~KAgaLN~~l~~~~~~---~~~d~vl~~DAD~~~~~pd~L~~~v~~f~ 270 (595)
.+.++++-.|++..... .+.+.+++++||+-+-+++.+++++..+.
T Consensus 82 ~~~~~si~~~l~~~~~~~~~~~~~~vlv~~~D~p~~~~~~i~~l~~~~~ 130 (231)
T 1vgw_A 82 QTRAETVRNGVAKLLETGLAAETDNILVHDAARCCLPSEALARLIEQAG 130 (231)
T ss_dssp SSHHHHHHHHHHHHHHHSSSCTTSEEEECCTTCTTCCHHHHHHHHHHHT
T ss_pred CcHHHHHHHHHHHHhhhccCCCCCEEEEEcCCcccCCHHHHHHHHHHHh
Confidence 46788888887742100 14689999999984336899999988764
No 34
>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus}
Probab=30.84 E-value=99 Score=28.25 Aligned_cols=41 Identities=15% Similarity=0.087 Sum_probs=31.8
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEEcCCC-CCCchHHHHHHHhhh
Q 007647 225 HYKAGAMNVLTRVSGLMTNAPFMLNVDCDM-YANNPEIVLQAMCLH 269 (595)
Q Consensus 225 ~~KAgaLN~~l~~~~~~~~~d~vl~~DAD~-~~~~pd~L~~~v~~f 269 (595)
.|-++++..|++. ..+.|.+++++||+ .+ +++.+++++..+
T Consensus 71 ~G~~~si~~al~~---~~~~~~vlv~~~D~P~i-~~~~i~~l~~~~ 112 (197)
T 3d5n_A 71 EGISTSLKLGLRF---FKDYDAVLVALGDMPFV-TKEDVNKIINTF 112 (197)
T ss_dssp GCHHHHHHHHHHH---TTTSSEEEEEETTCCCS-CHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHh---hccCCcEEEEeCCcccc-CHHHHHHHHHHh
Confidence 3667888888884 22348999999999 55 689999888765
No 35
>1vic_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics; 1.80A {Haemophilus influenzae} SCOP: c.68.1.13 PDB: 1vh3_A 3duv_A*
Probab=28.16 E-value=2.6e+02 Score=26.48 Aligned_cols=29 Identities=21% Similarity=0.129 Sum_probs=22.7
Q ss_pred CCCCEEEEEcCCCCCCchHHHHHHHhhhc
Q 007647 242 TNAPFMLNVDCDMYANNPEIVLQAMCLHL 270 (595)
Q Consensus 242 ~~~d~vl~~DAD~~~~~pd~L~~~v~~f~ 270 (595)
.+.+.+++++||+-+-+++.+++++..+.
T Consensus 89 ~~~~~vlv~~~D~P~i~~~~i~~l~~~~~ 117 (262)
T 1vic_A 89 PDNEIIVNIQGDEPLIPPVIVRQVADNLA 117 (262)
T ss_dssp CTTCEEEECCTTCTTCCHHHHHHHHHHHH
T ss_pred CCCCEEEEEeCCcCccCHHHHHHHHHHHH
Confidence 35799999999983226899999887764
No 36
>3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} SCOP: c.68.1.0
Probab=27.06 E-value=1.5e+02 Score=28.09 Aligned_cols=45 Identities=11% Similarity=0.022 Sum_probs=31.8
Q ss_pred ChHHHHHHHHHhcCC---CCCCCEEEEEcCCCCCCchHHHHHHHhhhc
Q 007647 226 YKAGAMNVLTRVSGL---MTNAPFMLNVDCDMYANNPEIVLQAMCLHL 270 (595)
Q Consensus 226 ~KAgaLN~~l~~~~~---~~~~d~vl~~DAD~~~~~pd~L~~~v~~f~ 270 (595)
+..+++-.|++.... ..+.++|++.|||+-+-.++.+++++..+.
T Consensus 84 ~~~~sv~~al~~l~~~~~~~~~~~vlv~~~d~Pli~~~~i~~li~~~~ 131 (246)
T 3f1c_A 84 DRNETIMNGIRFVEKTYGLTDDDIIVTHDAVRPFLTHRIIEENIDAAL 131 (246)
T ss_dssp SHHHHHHHHHHHHHHHTCCCTTCEEEEEETTCTTCCHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHhhhhcCCCCCEEEEecCcccCCCHHHHHHHHHHHH
Confidence 567777777764210 023699999999983336999999998774
No 37
>2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus}
Probab=24.96 E-value=1.1e+02 Score=28.51 Aligned_cols=41 Identities=10% Similarity=0.035 Sum_probs=31.8
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEEcCCC-CCCchHHHHHHHhhhc
Q 007647 224 HHYKAGAMNVLTRVSGLMTNAPFMLNVDCDM-YANNPEIVLQAMCLHL 270 (595)
Q Consensus 224 ~~~KAgaLN~~l~~~~~~~~~d~vl~~DAD~-~~~~pd~L~~~v~~f~ 270 (595)
..|.+++++ +++ ..+.|.+++++||+ .+ +++.+++++..+.
T Consensus 71 ~~g~~~~~~-~~~----~~~~~~vlv~~~D~P~~-~~~~i~~l~~~~~ 112 (234)
T 2y6p_A 71 PSGSDRVLY-VVR----DLDVDLIINYQGDEPFV-YEEDIKLIFRELE 112 (234)
T ss_dssp CSHHHHHHH-HHT----TCCCSEEEECCTTCCCC-CHHHHHHHHHHHH
T ss_pred ccchHHHHH-HHH----hCCCCEEEEecCCcCcC-CHHHHHHHHHHHH
Confidence 357778774 555 34679999999999 76 6899999988764
No 38
>3rsb_A Adenosylcobinamide-phosphate guanylyltransferase; pyrophosphorylase binding motif, pyrophosphorylase; HET: GTP; 2.80A {Methanocaldococcus jannaschii}
Probab=24.26 E-value=42 Score=30.53 Aligned_cols=40 Identities=13% Similarity=0.028 Sum_probs=27.9
Q ss_pred ChHHHHHHHHHhcCCCCCCCEEEEEcCCCCCCchHHHHHHHhhhc
Q 007647 226 YKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHL 270 (595)
Q Consensus 226 ~KAgaLN~~l~~~~~~~~~d~vl~~DAD~~~~~pd~L~~~v~~f~ 270 (595)
|-++++..+++ .. .+.+++++||+-.-+++.+++++..+.
T Consensus 79 g~~~si~~al~----~~-~~~vlv~~~D~P~i~~~~i~~l~~~~~ 118 (196)
T 3rsb_A 79 GYIEDLNECIG----YF-SEPFLVVSSDLINLKSKIINSIVDYFY 118 (196)
T ss_dssp --CCCCCTTTT----TC-SSCEEEEETTEESCCHHHHHHHHHHHH
T ss_pred CcHHHHHHHHH----hC-CCCEEEEeCCcccCCHHHHHHHHHHHH
Confidence 34445555665 23 789999999992226899999998875
No 39
>2l9u_A Receptor tyrosine-protein kinase ERBB-3; transmenbrane dimer, membrane protein, EGFR; NMR {Homo sapiens}
Probab=22.70 E-value=66 Score=21.65 Aligned_cols=16 Identities=31% Similarity=0.476 Sum_probs=10.6
Q ss_pred HHHHHHHHHHHHHHhh
Q 007647 27 VIILFLLLCLLFYRLS 42 (595)
Q Consensus 27 ~~~~~~~~~yl~wR~~ 42 (595)
++.++++.-+||||-.
T Consensus 18 vif~~lg~tflywrgr 33 (40)
T 2l9u_A 18 VIFMMLGGTFLYWRGR 33 (40)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHhCceeEEEccc
Confidence 3445556778999854
No 40
>2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A*
Probab=21.78 E-value=1.2e+02 Score=27.87 Aligned_cols=40 Identities=13% Similarity=0.253 Sum_probs=31.6
Q ss_pred ChHHHHHHHHHhcCCCCCCCEEEEEcCCC-CCCchHHHHHHHhhh
Q 007647 226 YKAGAMNVLTRVSGLMTNAPFMLNVDCDM-YANNPEIVLQAMCLH 269 (595)
Q Consensus 226 ~KAgaLN~~l~~~~~~~~~d~vl~~DAD~-~~~~pd~L~~~v~~f 269 (595)
+.+.++..|++.. .+.+.+++++||+ .+ +++.+++++..+
T Consensus 78 ~~~~~i~~al~~~---~~~~~vlv~~~D~P~~-~~~~i~~l~~~~ 118 (223)
T 2xwl_A 78 DRTESVALALEAA---GDAEFVLVHDAARALT-PPALIARVVAAL 118 (223)
T ss_dssp SHHHHHHHHHTTC---TTCSEEEECCTTCTTC-CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhc---CCCCEEEEEcCCcccC-CHHHHHHHHHHH
Confidence 4688898998831 2678999999998 45 688999888766
Done!