BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007648
(594 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9HCS7|SYF1_HUMAN Pre-mRNA-splicing factor SYF1 OS=Homo sapiens GN=XAB2 PE=1 SV=2
Length = 855
Score = 582 bits (1501), Expect = e-165, Method: Compositional matrix adjust.
Identities = 290/541 (53%), Positives = 382/541 (70%), Gaps = 39/541 (7%)
Query: 20 LLRNPFSLKLWWRYLVAKREAPFKKRFVIYERALKALPGSYKLWHAYLIERLSIVKNLPI 79
++RN FS+K W RY+ K+ AP + +YERALK LP SYKLW+ YL R + VK+ +
Sbjct: 28 IMRNQFSVKCWLRYIEFKQGAPKPRLNQLYERALKLLPCSYKLWYRYLKARRAQVKHRCV 87
Query: 80 THPEYETLNNTFERALVTMHKMPRIWIMYLETLTSQKFITKARRTFDRALCALPVTQHDR 139
T P YE +NN ERA V MHKMPR+W+ Y + L Q +T RRTFDRAL ALP+TQH R
Sbjct: 88 TDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFLMDQGRVTHTRRTFDRALRALPITQHSR 147
Query: 140 IWEIYLRFVEQEGIPIETSLRVYRRYLKYDPSHIEDFIEFLVKSKLWQEAAERLASVLND 199
IW +YLRF+ +P ET++R YRR+LK P E++IE+L S EAA+RLA+V+ND
Sbjct: 148 IWPLYLRFLRSHPLP-ETAVRGYRRFLKLSPESAEEYIEYLKSSDRLDEAAQRLATVVND 206
Query: 200 DQFYSIKGKTKHRLWLELCDLLTTHATEISGLNVDAIIRGGIRKFTDEVGRLWTSLADYY 259
++F S GK+ ++LW ELCDL++ + ++ LNVDAIIRGG+ +FTD++G+LW SLADYY
Sbjct: 207 ERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNVDAIIRGGLTRFTDQLGKLWCSLADYY 266
Query: 260 IRRELFEKARDIFEEGMMTVVTVRDFSVIFDSYSQFEEIMVSAKMAKPDLSVEEEEDDEE 319
IR FEKARD++EE + TV+TVRDF+ +FDSY+QFEE M++AKM E E
Sbjct: 267 IRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYAQFEESMIAAKM----------ETASE 316
Query: 320 HGSAEDEDIRLDVNLSMAEFVKKVLNGFWLHDVKDVDLRLARLEHLMNRRPELANSVLLR 379
G E++D+ D++LRLAR E L++RRP L NSVLLR
Sbjct: 317 LGREEEDDV-------------------------DLELRLARFEQLISRRPLLLNSVLLR 351
Query: 380 QNPHNVEQWHRRVKIFEGNPTKQILTYTEAVRTVDPMKAVGKPHTLWVAFAKLYETYKDI 439
QNPH+V +WH+RV + +G P + I TYTEAV+TVDP KA GKPHTLWVAFAK YE +
Sbjct: 352 QNPHHVHEWHKRVALHQGRPREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQL 411
Query: 440 ANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMRRATAEPSVEVRRRV 499
+ARVI +KA +VN+K VD LAS+WC+ E+ELRH+N+ AL L+R+ATA P+ RR
Sbjct: 412 DDARVILEKATKVNFKQVDDLASVWCQCGELELRHENYDEALRLLRKATALPA---RRAE 468
Query: 500 AADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILDLRIATPQIIINYALLL 559
DG+EPVQ +++KSL++W+ DLEESLG +ST+AVY+RILDLRIATPQI+INYA+ L
Sbjct: 469 YFDGSEPVQNRVYKSLKVWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFL 528
Query: 560 E 560
E
Sbjct: 529 E 529
>sp|Q9DCD2|SYF1_MOUSE Pre-mRNA-splicing factor SYF1 OS=Mus musculus GN=Xab2 PE=2 SV=1
Length = 855
Score = 582 bits (1501), Expect = e-165, Method: Compositional matrix adjust.
Identities = 290/541 (53%), Positives = 383/541 (70%), Gaps = 39/541 (7%)
Query: 20 LLRNPFSLKLWWRYLVAKREAPFKKRFVIYERALKALPGSYKLWHAYLIERLSIVKNLPI 79
++RN FS+K W RY+ K+ AP + +YERALK LP SYKLW+ YL R + VK+ +
Sbjct: 28 IMRNQFSVKCWLRYIEFKQGAPKPRLNQLYERALKLLPCSYKLWYRYLKARRAQVKHRCV 87
Query: 80 THPEYETLNNTFERALVTMHKMPRIWIMYLETLTSQKFITKARRTFDRALCALPVTQHDR 139
T P YE +NN ERA V MHKMPR+W+ Y + L Q +T RRTFDRAL ALP+TQH R
Sbjct: 88 TDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFLMDQGRVTHTRRTFDRALRALPITQHSR 147
Query: 140 IWEIYLRFVEQEGIPIETSLRVYRRYLKYDPSHIEDFIEFLVKSKLWQEAAERLASVLND 199
IW +YLRF+ +P ET++R YRR+LK P E++IE+L S EAA+RLA+V+ND
Sbjct: 148 IWPLYLRFLRSHPLP-ETAVRGYRRFLKLSPESAEEYIEYLKSSDRLDEAAQRLATVVND 206
Query: 200 DQFYSIKGKTKHRLWLELCDLLTTHATEISGLNVDAIIRGGIRKFTDEVGRLWTSLADYY 259
++F S GK+ ++LW ELCDL++ + ++ LNVDAIIRGG+ +FTD++G+LW SLADYY
Sbjct: 207 ERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNVDAIIRGGLTRFTDQLGKLWCSLADYY 266
Query: 260 IRRELFEKARDIFEEGMMTVVTVRDFSVIFDSYSQFEEIMVSAKMAKPDLSVEEEEDDEE 319
IR FEKARD++EE + TV+TVRDF+ +FDSY+QFEE M++AKM E E
Sbjct: 267 IRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYAQFEESMIAAKM----------ETASE 316
Query: 320 HGSAEDEDIRLDVNLSMAEFVKKVLNGFWLHDVKDVDLRLARLEHLMNRRPELANSVLLR 379
G E++D+ D++LRLAR E L++RRP L NSVLLR
Sbjct: 317 LGREEEDDV-------------------------DLELRLARFEQLISRRPLLLNSVLLR 351
Query: 380 QNPHNVEQWHRRVKIFEGNPTKQILTYTEAVRTVDPMKAVGKPHTLWVAFAKLYETYKDI 439
QNPH+V +WH+RV + +G P + I TYTEAV+TVDP KA GKPHTLWVAFAK YE +
Sbjct: 352 QNPHHVHEWHKRVALHQGRPREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQL 411
Query: 440 ANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMRRATAEPSVEVRRRV 499
+ARVI +KA +VN+K VD LAS+WC+ E+ELRH+N+ AL+L+R+ATA P+ RR
Sbjct: 412 DDARVILEKATKVNFKQVDDLASVWCQCGELELRHENYDEALKLLRKATALPA---RRAE 468
Query: 500 AADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILDLRIATPQIIINYALLL 559
DG+EPVQ +++KSL++W+ DLEESLG +ST+AVY+RILDLRIATPQI+INYA+ L
Sbjct: 469 YFDGSEPVQNRVYKSLKVWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFL 528
Query: 560 E 560
E
Sbjct: 529 E 529
>sp|Q99PK0|SYF1_RAT Pre-mRNA-splicing factor SYF1 OS=Rattus norvegicus GN=Xab2 PE=2
SV=1
Length = 855
Score = 582 bits (1500), Expect = e-165, Method: Compositional matrix adjust.
Identities = 290/541 (53%), Positives = 383/541 (70%), Gaps = 39/541 (7%)
Query: 20 LLRNPFSLKLWWRYLVAKREAPFKKRFVIYERALKALPGSYKLWHAYLIERLSIVKNLPI 79
++RN FS+K W RY+ K+ AP + +YERALK LP SYKLW+ YL R + VK+ +
Sbjct: 28 IMRNQFSVKCWLRYIEFKQGAPKPRLNQLYERALKLLPCSYKLWYRYLKARRAQVKHRCV 87
Query: 80 THPEYETLNNTFERALVTMHKMPRIWIMYLETLTSQKFITKARRTFDRALCALPVTQHDR 139
T P YE +NN ERA V MHKMPR+W+ Y + L Q +T RRTFDRAL ALP+TQH R
Sbjct: 88 TDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFLMDQGRVTHTRRTFDRALRALPITQHSR 147
Query: 140 IWEIYLRFVEQEGIPIETSLRVYRRYLKYDPSHIEDFIEFLVKSKLWQEAAERLASVLND 199
IW +YLRF+ +P ET++R YRR+LK P E++IE+L S EAA+RLA+V+ND
Sbjct: 148 IWPLYLRFLRSHPLP-ETAVRGYRRFLKLSPESAEEYIEYLKSSDRLDEAAQRLATVVND 206
Query: 200 DQFYSIKGKTKHRLWLELCDLLTTHATEISGLNVDAIIRGGIRKFTDEVGRLWTSLADYY 259
++F S GK+ ++LW ELCDL++ + ++ LNVDAIIRGG+ +FTD++G+LW SLADYY
Sbjct: 207 ERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNVDAIIRGGLTRFTDQLGKLWCSLADYY 266
Query: 260 IRRELFEKARDIFEEGMMTVVTVRDFSVIFDSYSQFEEIMVSAKMAKPDLSVEEEEDDEE 319
IR FEKARD++EE + TV+TVRDF+ +FDSY+QFEE M++AKM E E
Sbjct: 267 IRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYAQFEESMIAAKM----------ETASE 316
Query: 320 HGSAEDEDIRLDVNLSMAEFVKKVLNGFWLHDVKDVDLRLARLEHLMNRRPELANSVLLR 379
G E++D+ D++LRLAR E L++RRP L NSVLLR
Sbjct: 317 LGREEEDDV-------------------------DLELRLARFEQLISRRPLLLNSVLLR 351
Query: 380 QNPHNVEQWHRRVKIFEGNPTKQILTYTEAVRTVDPMKAVGKPHTLWVAFAKLYETYKDI 439
QNPH+V +WH+RV + +G P + I TYTEAV+TVDP KA GKPHTLWVAFAK YE +
Sbjct: 352 QNPHHVHEWHKRVALHQGRPREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQL 411
Query: 440 ANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMRRATAEPSVEVRRRV 499
+ARVI +KA +VN+K VD LAS+WC+ E+ELRH+N+ AL+L+R+ATA P+ RR
Sbjct: 412 DDARVILEKATKVNFKQVDDLASVWCQCGELELRHENYDEALKLLRKATALPA---RRAE 468
Query: 500 AADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILDLRIATPQIIINYALLL 559
DG+EPVQ +++KSL++W+ DLEESLG +ST+AVY+RILDLRIATPQI+INYA+ L
Sbjct: 469 YFDGSEPVQNRVYKSLKVWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFL 528
Query: 560 E 560
E
Sbjct: 529 E 529
>sp|Q54Z08|SYF1_DICDI Pre-mRNA-splicing factor SYF1 OS=Dictyostelium discoideum GN=xab2
PE=3 SV=1
Length = 850
Score = 512 bits (1319), Expect = e-144, Method: Compositional matrix adjust.
Identities = 247/556 (44%), Positives = 378/556 (67%), Gaps = 44/556 (7%)
Query: 9 PSEDDLLYEEELLRNPFSLKLWWRYLVAKREAPFKKRFVIYERALKALPGSYKLWHAYLI 68
PS DDL YEE++ +NP+S+ W RYL K+ +P K+R IYERA++ LP SYK+WH YL+
Sbjct: 27 PSIDDLPYEEDVSKNPYSVNCWLRYLEFKQGSPQKQRNYIYERAIRELPRSYKIWHQYLL 86
Query: 69 ERLSIVKNLPITHPEYETLNNTFERALVTMHKMPRIWIMYLETLTSQKFITKARRTFDRA 128
ER ++ I +E +N FER+LV + KMPRIWI Y E L Q+ IT R+TFDRA
Sbjct: 87 ERTLAIRGKCILENSFEAVNTLFERSLVFLDKMPRIWIEYCEFLMIQEKITLTRKTFDRA 146
Query: 129 LCALPVTQHDRIWEIYLRFVEQEGIPIETSLRVYRRYLKYDPSHIEDFIEFLVKSKLWQE 188
L ALPVTQH RIW Y +F+ + IP T +RVY+RYLK P +E++IE+L+K K WQE
Sbjct: 147 LIALPVTQHYRIWNEYTKFILKRSIPSLTCIRVYKRYLKIQPEKVEEYIEYLIKIKEWQE 206
Query: 189 AAERLASVLNDDQFYSIKGKTKHRLWLELCDLLTTHATEISGLNVDAIIRGGIRKFTDEV 248
+L +L++ +F SIKGK++H WL+LC++L+++ +I+G++VD++IR GI KF+D++
Sbjct: 207 VVNQLIKLLDNVKFKSIKGKSRHDHWLQLCEILSSYPKQITGVDVDSVIRSGIGKFSDQI 266
Query: 249 GRLWTSLADYYIRRELFEKARDIFEEGMMTVVTVRDFSVIFDSYSQFEEIMVSAKMAKPD 308
G+LW L+DYYI+ FEKARDIFEE + +V T RDFS I++SY+QFE+ +++AK
Sbjct: 267 GKLWCYLSDYYIQLAQFEKARDIFEEALTSVGTARDFSFIWESYTQFEDSLIAAKQ---- 322
Query: 309 LSVEEEEDDEEHGSAEDEDIRLDVNLSMAEFVKKVLNGFWLHDVKDVDLRLARLEHLMNR 368
+ EE+ E++ + EF D+ + R E+L+ R
Sbjct: 323 -EILEEDPSEDN---------------LLEF----------------DIIIERYENLIQR 350
Query: 369 RPELANSVLLRQNPHNVEQWHRRVKIFEGNPTKQ----ILTYTEAVRTVDPMKAVGKPHT 424
+P L NSV+L+QNP+NV++W +RV ++ NPT I T+T++++++DP A GK T
Sbjct: 351 QPLLLNSVMLKQNPNNVQEWLKRVNLY-SNPTPNVKMIIQTFTDSIKSIDPQLAKGKLST 409
Query: 425 LWVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELM 484
++ FA YE ++ AR+IF+ ++ VN+KT+D L++++C++AEMEL+H+N++ A+E++
Sbjct: 410 IYSTFAHFYEQNNKLSQARLIFENSLTVNFKTIDDLSTLYCDYAEMELKHRNYEKAIEIL 469
Query: 485 RRATAEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILDL 544
+R T P ++ + NEPVQ +L KS+++WTFYVDLEES G +T+++YE+++ L
Sbjct: 470 KRGTVSPK---KQNTIIEENEPVQKRLFKSIKIWTFYVDLEESFGTFHNTKSIYEKMIQL 526
Query: 545 RIATPQIIINYALLLE 560
++ TPQII+N+A LE
Sbjct: 527 KVVTPQIILNFAKYLE 542
>sp|Q7SAK5|SYF1_NEUCR Pre-mRNA-splicing factor syf-1 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=syf-1 PE=3 SV=1
Length = 829
Score = 469 bits (1208), Expect = e-131, Method: Compositional matrix adjust.
Identities = 255/563 (45%), Positives = 354/563 (62%), Gaps = 51/563 (9%)
Query: 10 SEDDLLYEEELLRNPFSLKLWWRYLVAK-REAPFKKRFVIYERALKALPGSYKLWHAYLI 68
SE+D YE++++RNP S K W Y+ K ++ +++ I ERA LP SYKLW YL
Sbjct: 18 SEEDFPYEQDIVRNPGSTKPWLAYIEYKLQKGTVQEQAYIMERACVQLPRSYKLWKMYLR 77
Query: 69 ERLSIVK--NLPITHPEYETLNNTFERALVTMHKMPRIWIMYLETLTSQKFITKARRTFD 126
R V N I EY+ +N+ FERAL+ ++KMPRIW MYL+ L Q +T RRTFD
Sbjct: 78 FRTKHVSKLNAAIFASEYQKVNSLFERALILLNKMPRIWEMYLKFLMQQPLVTHTRRTFD 137
Query: 127 RALCALPVTQHDRIWEIYLRFVEQ-EGIPIETSLRVYRRYLKYDPSHIEDFIEFLVKSKL 185
RAL ALP+TQH+RIW +Y F EG ET+++++RRY++ P EDFIE LV L
Sbjct: 138 RALRALPITQHNRIWALYRPFANSAEG---ETAVKIWRRYMQVHPEDAEDFIELLVAVGL 194
Query: 186 WQEAAERLASVLNDDQFYSIKGKTKHRLWLELCDLLTTHATEI-----SGLNVDAIIRGG 240
+ EA + +LN+ +F S K + LW E+ DLL HAT + +G++V+ IIR G
Sbjct: 195 YTEAVHKYIEILNNPRFTSKNSKGHYELWSEMVDLLVEHATAVETGHETGIDVERIIRSG 254
Query: 241 IRKFTDEVGRLWTSLADYYIRRELFEKARDIFEEGMMTVVTVRDFSVIFDSYSQFEEIMV 300
I +F D+ G+LW LA Y+IRR FE+ARD+FEEG+ TV+TVRDF+++FDSY++FEE ++
Sbjct: 255 IERFADQRGKLWCGLATYWIRRGSFERARDVFEEGITTVMTVRDFTLVFDSYTEFEESII 314
Query: 301 SAKMAKPDLSVEEEEDDEEHGSAEDEDIRLDVNLSMAEFVKKVLNGFWLHDVKDVDLRLA 360
SA M E+ E DE +A+F D+D+R+
Sbjct: 315 SALMEMASTRAEKGEVDE-----------------VADF--------------DLDIRMM 343
Query: 361 RLEHLMNRRPELANSVLLRQNPHNVEQWHRRVKIFEGNPTKQILTYTEAVRTVDPMKAVG 420
R EHLM+RRP L N VLLRQNP+NV +W +RV ++ N + + TY +A+ + P KAVG
Sbjct: 344 RFEHLMDRRPFLLNDVLLRQNPNNVTEWEKRVALWGDNKEEVVKTYLDAIEAIQPKKAVG 403
Query: 421 KPHTLWVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGA 480
H LW +AK YE D+++AR I +KAV+V YK+V LA +W EWAEMELR++ F A
Sbjct: 404 ALHQLWTNYAKFYEAGGDLSSARRIMEKAVKVPYKSVAELADMWIEWAEMELRNECFDEA 463
Query: 481 LELMRRATAEPSVEVRRRVAADGNEPV---QMKLHKSLRLWTFYVDLEESLGNLESTRAV 537
+++M +A P +R D + Q ++HKS +LW+FYVDL ES+ +L+ TR V
Sbjct: 464 MKVMAKAVQAP-----KRSTVDYFDETLSPQQRVHKSWKLWSFYVDLVESVSSLDETRKV 518
Query: 538 YERILDLRIATPQIIINYALLLE 560
YERI +LRIATPQ ++NYA LLE
Sbjct: 519 YERIFELRIATPQTVVNYANLLE 541
>sp|Q4WVF4|SYF1_ASPFU Pre-mRNA-splicing factor syf1 OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=syf1 PE=3
SV=1
Length = 839
Score = 467 bits (1202), Expect = e-130, Method: Compositional matrix adjust.
Identities = 250/560 (44%), Positives = 355/560 (63%), Gaps = 45/560 (8%)
Query: 10 SEDDLLYEEELLRNPFSLKLWWRYLVAKREAP--FKKRFVIYERALKALPGSYKLWHAYL 67
++ D +YE++L R P S+K W Y+ K++ +++ FV+ ERA K LP SYKLW YL
Sbjct: 15 ADQDTVYEQDLFRAPGSIKPWLAYIEYKQQNGTLYEQAFVM-ERACKQLPRSYKLWKMYL 73
Query: 68 IERLSIVKNLPIT--HPEYETLNNTFERALVTMHKMPRIWIMYLETLTSQKFITKARRTF 125
R++ ++ T EY+ +N FERAL+ ++KMP+IW MYL L Q +T+ RRTF
Sbjct: 74 EFRINHLRGRNATKYRAEYQKVNALFERALILLNKMPKIWEMYLSFLLQQPLVTQTRRTF 133
Query: 126 DRALCALPVTQHDRIWEIYLRFVEQEGIPIETSLRVYRRYLKYDPSHIEDFIEFLVKSKL 185
DRAL ALP+TQH+RIW++Y F +T+++++ RY++ P + ED+IE LV+
Sbjct: 134 DRALRALPITQHNRIWKLYKAFAR--SASGQTAVKIWARYMQIHPENAEDYIELLVELGQ 191
Query: 186 WQEAAERLASVLNDDQFYSIKGKTKHRLWLELCDLLTTHATEIS-----GLNVDAIIRGG 240
+ EA +R +L+D +F S KGK+ +LW E+ DLL + A +I G++VDAI+R G
Sbjct: 192 YTEAVKRYMEILDDPRFQSKKGKSNFQLWTEMVDLLVSKAKQIRTGPQVGIDVDAILRSG 251
Query: 241 IRKFTDEVGRLWTSLADYYIRRELFEKARDIFEEGMMTVVTVRDFSVIFDSYSQFEEIMV 300
I +F D+ G+LW LA Y+I + FEKARD+FEEG+ TV+TVRDF++IFD+Y +FEE ++
Sbjct: 252 IDRFADQRGKLWAGLATYWITKGNFEKARDVFEEGITTVMTVRDFTLIFDAYVEFEESII 311
Query: 301 SAKMAKPDLSVEEEEDDEEHGSAEDEDIRLDVNLSMAEFVKKVLNGFWLHDVKDVDLRLA 360
+ M + ++ DE+ A+F D+DLR+
Sbjct: 312 GSLMEAAAVRADKGNVDED-----------------ADF--------------DLDLRML 340
Query: 361 RLEHLMNRRPELANSVLLRQNPHNVEQWHRRVKIFEGNPTKQILTYTEAVRTVDPMKAVG 420
R E LM+RRP L N VLLRQNP+NV +W +RV ++ N + + TYT A+ ++P KA G
Sbjct: 341 RFEQLMDRRPFLVNDVLLRQNPNNVIEWEKRVALWGDNKEEIVNTYTAAIAAINPKKAHG 400
Query: 421 KPHTLWVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGA 480
K LWV +AK YE+ D+ ARVIFDKAV+V +K+V LA WCEWAEMELR +NF A
Sbjct: 401 KFSELWVNYAKFYESGGDLDTARVIFDKAVKVPFKSVAELADTWCEWAEMELRSENFDKA 460
Query: 481 LELMRRATAEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYER 540
+++M +AT P D Q ++HKS +LW+FYVDL ES+ LE TR VYER
Sbjct: 461 VDIMAKATQAPKKSTVDYF--DETLSPQQRVHKSWKLWSFYVDLVESVATLEETRKVYER 518
Query: 541 ILDLRIATPQIIINYALLLE 560
I +LRIATPQ ++NYA LLE
Sbjct: 519 IFELRIATPQTVVNYANLLE 538
>sp|Q52DF3|SYF1_MAGO7 Pre-mRNA-splicing factor SYF1 OS=Magnaporthe oryzae (strain 70-15 /
ATCC MYA-4617 / FGSC 8958) GN=SYF1 PE=3 SV=2
Length = 832
Score = 464 bits (1195), Expect = e-130, Method: Compositional matrix adjust.
Identities = 250/562 (44%), Positives = 348/562 (61%), Gaps = 49/562 (8%)
Query: 10 SEDDLLYEEELLRNPFSLKLWWRYLVAK-REAPFKKRFVIYERALKALPGSYKLWHAYLI 68
++DD +YE+++ R+P S K W Y+ K + +++ + ERA LP SYKLW YL
Sbjct: 21 TDDDFVYEQDIQRSPGSTKPWLAYISYKIQHGTVEEQAFVLERACMQLPRSYKLWKMYLT 80
Query: 69 ERLSIVK--NLPITHPEYETLNNTFERALVTMHKMPRIWIMYLETLTSQKFITKARRTFD 126
R + N I EY +N+ FERAL+ ++KMPRIW MYL+ L Q +T RRTFD
Sbjct: 81 FRTKHIAKLNAAIFAAEYRKVNSLFERALILLNKMPRIWEMYLKFLMKQPLVTLTRRTFD 140
Query: 127 RALCALPVTQHDRIWEIYLRFVEQEGIPIETSLRVYRRYLKYDPSHIEDFIEFLVKSKLW 186
RAL ALP+TQH+RIW +Y F P T+++++RRY++ P EDFIE L + +
Sbjct: 141 RALRALPITQHNRIWALYRPFANSAAGP--TAVKIWRRYMQVHPEDAEDFIELLYQVGYY 198
Query: 187 QEAAERLASVLNDDQFYSIKGKTKHRLWLELCDLLTTHATEI-----SGLNVDAIIRGGI 241
EAA++ VLN+ +F S GK LW E+ +LL HATE+ +G++V+ IIR GI
Sbjct: 199 TEAAKKYIDVLNNPRFTSKHGKGHFELWSEMVELLVEHATEVEAGYETGIDVERIIRSGI 258
Query: 242 RKFTDEVGRLWTSLADYYIRRELFEKARDIFEEGMMTVVTVRDFSVIFDSYSQFEEIMVS 301
+F D+ G+LW LA Y+IRR FE+ARD+FEEG+ TV+TVRDF+++FDSY++FEE ++
Sbjct: 259 ERFADQRGKLWVGLATYWIRRGSFERARDVFEEGITTVMTVRDFTLVFDSYAEFEESVIG 318
Query: 302 AKMAKPDLSVEEEEDDEEHGSAEDEDIRLDVNLSMAEFVKKVLNGFWLHDVKDVDLRLAR 361
A M E+ DE A+F D+D+R+ R
Sbjct: 319 AMMEVAGQRAEKGVVDE-----------------AADF--------------DLDIRMMR 347
Query: 362 LEHLMNRRPELANSVLLRQNPHNVEQWHRRVKIFEGNPTKQILTYTEAVRTVDPMKAVGK 421
EHLM+RRP L N VLLRQNP+NV +W +RV ++ N + + TYT A+ V P KA G
Sbjct: 348 FEHLMDRRPFLLNDVLLRQNPNNVNEWEKRVALWGDNHNEVVNTYTNAIAAVQPKKASGP 407
Query: 422 PHTLWVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGAL 481
H LW +AK YE D+ +AR+I +KAV+V +K+V LA +W EWAEMELR+ NF+ A+
Sbjct: 408 FHQLWANYAKFYERGGDLRSARIIMEKAVKVPFKSVVELADMWIEWAEMELRNDNFEEAV 467
Query: 482 ELMRRATAEPSVEVRRRVAADGNEPV---QMKLHKSLRLWTFYVDLEESLGNLESTRAVY 538
+M +A P +R D + Q ++HKS +LW+FYVDL ES+G LE T+ VY
Sbjct: 468 RIMAKAVQAP-----KRSTVDYFDETLTPQQRVHKSWKLWSFYVDLVESVGTLEDTKKVY 522
Query: 539 ERILDLRIATPQIIINYALLLE 560
ERI +LRIATPQ ++NYA LLE
Sbjct: 523 ERIFELRIATPQTVVNYANLLE 544
>sp|Q5BH69|SYF1_EMENI Pre-mRNA-splicing factor syf1 OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=syf1
PE=3 SV=1
Length = 851
Score = 459 bits (1181), Expect = e-128, Method: Compositional matrix adjust.
Identities = 249/576 (43%), Positives = 356/576 (61%), Gaps = 60/576 (10%)
Query: 10 SEDDLLYEEELLRNPFSLKLWWRYLVAKR------EAPFKKR------------FVIYER 51
+++D +YE++LLRNP ++K W Y+ K+ E F R F + ER
Sbjct: 15 ADNDSVYEQDLLRNPGTIKPWLAYIEYKQQNGTLYEQAFVGRPLDALIISILNDFQVMER 74
Query: 52 ALKALPGSYKLWHAYLIERLSIVKNLPIT--HPEYETLNNTFERALVTMHKMPRIWIMYL 109
A K LP SYKLW YL R +KN E++ +N FERAL+ ++KMPRIW MYL
Sbjct: 75 ACKQLPRSYKLWKMYLEFRTKHLKNRNAIKYRAEFQKVNTLFERALILLNKMPRIWEMYL 134
Query: 110 ETLTSQKFITKARRTFDRALCALPVTQHDRIWEIYLRFVEQEGIPIETSLRVYRRYLKYD 169
+ Q +T+ RRTFDRAL ALPVTQH+RIW++Y F +T+++++ RY++
Sbjct: 135 TFMLQQPLVTQTRRTFDRALRALPVTQHNRIWKLYKTFARSASG--QTAVKIWARYMQIH 192
Query: 170 PSHIEDFIEFLVKSKLWQEAAERLASVLNDDQFYSIKGKTKHRLWLELCDLLTTHATEI- 228
P + E++I LV+ + +A +R +L++ +F S +GK+ +LW E+ DLL + A +I
Sbjct: 193 PENAEEYINLLVEMGHYTDAIKRYMEILDNPRFQSREGKSNFQLWTEMVDLLVSKAKKIE 252
Query: 229 ----SGLNVDAIIRGGIRKFTDEVGRLWTSLADYYIRRELFEKARDIFEEGMMTVVTVRD 284
+G++VDAI+R GI +F D+ G+LW LA Y+I + FEKARD+FEEG+ TV+TVRD
Sbjct: 253 TGPQTGIDVDAILRSGIDRFADQRGKLWAGLATYWITKGNFEKARDVFEEGITTVMTVRD 312
Query: 285 FSVIFDSYSQFEEIMVSAKMAKPDLSVEEEEDDEEHGSAEDEDIRLDVNLSMAEFVKKVL 344
F++IFDSY +FEE ++ + M + + + DEE A+F
Sbjct: 313 FTLIFDSYVEFEESIIGSLMEAAAVRADNGKADEE-----------------ADF----- 350
Query: 345 NGFWLHDVKDVDLRLARLEHLMNRRPELANSVLLRQNPHNVEQWHRRVKIFEGNPTKQIL 404
D+DLR+ R E LM+RRP L N VLLRQNP+NV +W +RV ++ N + +
Sbjct: 351 ---------DLDLRMLRFEQLMDRRPFLVNDVLLRQNPNNVIEWEKRVALWGDNNVEIVN 401
Query: 405 TYTEAVRTVDPMKAVGKPHTLWVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIW 464
TYT A+ ++P KAVGK LWV +AK YE D+ AR+IF+KAV+V +K+V+ LA W
Sbjct: 402 TYTAAIAAINPKKAVGKFSELWVNYAKFYERGGDLDTARIIFEKAVKVPFKSVNELAETW 461
Query: 465 CEWAEMELRHKNFKGALELMRRATAEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDL 524
CEWAEMELR +NF A+E+M +AT P D Q ++HKS +LW+FYVDL
Sbjct: 462 CEWAEMELRSENFDKAVEIMAKATQAPKKSTVDYF--DETLSPQQRIHKSWKLWSFYVDL 519
Query: 525 EESLGNLESTRAVYERILDLRIATPQIIINYALLLE 560
ES+ ++E T+ VYERI +LRIATPQ ++NYA LLE
Sbjct: 520 VESVSSIEETKKVYERIFELRIATPQTVVNYANLLE 555
>sp|Q9P7R9|SYF1_SCHPO Pre-mRNA-splicing factor cwf3 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=cwf3 PE=1 SV=1
Length = 790
Score = 442 bits (1138), Expect = e-123, Method: Compositional matrix adjust.
Identities = 232/553 (41%), Positives = 349/553 (63%), Gaps = 48/553 (8%)
Query: 12 DDLLYEEELLRNPFSLKLWWRYLVAKREAPFKKRFVIYERALKALPGSYKLWHAYLIERL 71
DD +E ELLR+P+SLK W RY+ + +KR +++ERA LPGSYK+W +YL R+
Sbjct: 17 DDEPFELELLRDPYSLKSWLRYIKTHEGSTLEKRVLLFERACSELPGSYKIWKSYLELRV 76
Query: 72 SIVKNL-PITHPE-YETLNNTFERALVTMHKMPRIWIMYLETLTSQKFITKARRTFDRAL 129
+ V++L P H E + ++N+ FER+L+ +HKMP IW +YL+ L Q +TK R TF+ AL
Sbjct: 77 AHVEHLNPYFHAEAFASVNDCFERSLILLHKMPVIWKLYLQFLMKQPNVTKIRCTFNSAL 136
Query: 130 CALPVTQHDRIWEIYLRFVEQEGIPIETSLRVYRRYLKYDPSHIEDFIEFLVKSKLWQEA 189
ALPVTQHD IW+++ ++ E G + VYRRY++ +P IE++IE L K LW EA
Sbjct: 137 RALPVTQHDDIWDMFTKYAEDIGGLF--CIHVYRRYIQVEPRAIENYIEILCKLGLWNEA 194
Query: 190 AERLASVLNDDQFYSIKGKTKHRLWLELCDLLTTHATEISGLNVDAIIRGGIRKFTDEVG 249
A + +LN F S K K+ +++WLE +L+ H ++V+ + R GI++F+D+ G
Sbjct: 195 ARQYEDILNRPVFLSAKRKSNYQIWLEFSELVVQHPDHTQNIDVEKVFRAGIKRFSDQAG 254
Query: 250 RLWTSLADYYIRRELFEKARDIFEEGMMTVVTVRDFSVIFDSYSQFEEIMVSAKMAKPDL 309
+LWT LA YYIR +EKAR F EGM ++TVR+F++IFD++ +FEE +SA++
Sbjct: 255 KLWTYLAQYYIRIGDYEKARSTFYEGMNNIMTVRNFTIIFDAFVEFEEQWLSARV----- 309
Query: 310 SVEEEEDDEEHGSAEDEDIRLDVNLSMAEFVKKVLNGFWLHDVKDVDLRLARLEHLMNRR 369
+ G+A DE LS +D +A LE ++++R
Sbjct: 310 -------EASSGNANDE-------LS-------------------IDFHMAWLEKILDKR 336
Query: 370 PELANSVLLRQNPHNVEQWHRRVKIFEGNPTKQILTYTEAVRTVDPMKAVGKPHTLWVAF 429
P N VLLRQN +NV++W RRVK E + K + YT+A++ V+P A G L+ F
Sbjct: 337 PLYINDVLLRQNINNVDEWLRRVKFLEDDSEKVVQVYTDAIKNVNPKLAHGSLGKLFSEF 396
Query: 430 AKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMRRATA 489
A+ YE + D+ +R+IF+KA V YKTV+ LA +W +WAEMELRH+NF A +L+ A
Sbjct: 397 ARFYENFDDLEQSRIIFEKATHVPYKTVNELAQVWIDWAEMELRHQNFDAARKLIGDAVH 456
Query: 490 EPSVEVRRRVAADGNEPV--QMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILDLRIA 547
P R+ + +E + Q++LHKS ++W +Y+DLEES+G +E+TR +Y+R+ +L+IA
Sbjct: 457 AP----RKSHISFFDESLSPQVRLHKSSKIWMYYLDLEESVGTIETTRKLYDRVFELKIA 512
Query: 548 TPQIIINYALLLE 560
TPQ+++NYA LLE
Sbjct: 513 TPQVVVNYANLLE 525
>sp|Q6CAR6|SYF1_YARLI Pre-mRNA-splicing factor SYF1 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=SYF1 PE=3 SV=1
Length = 736
Score = 319 bits (818), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 192/549 (34%), Positives = 307/549 (55%), Gaps = 63/549 (11%)
Query: 16 YEEELLRNPFSLKLWWRYL--VAKREAPFKKRFVIYERALKALPGSYKLWHAYLIERLSI 73
+E ++ +P ++ W RY+ V + +++ +++ERA+ ALP SYKLW YL R +
Sbjct: 4 HELDIASSPGDVRPWIRYISSVKNDKTTARQKCILFERAVTALPRSYKLWKEYLDFRSGL 63
Query: 74 VKNL-PITHP-EYETLNNTFERALVTMHKMPRIWIMYLETLTSQKFITKARRTFDRALCA 131
L PI H EY+ +N +E++LV +HKMP IW+ YL+ L Q +TK R + AL +
Sbjct: 64 CTGLNPIKHADEYDRVNALYEKSLVLLHKMPVIWLQYLQFLMLQPKVTKTRSVINEALRS 123
Query: 132 LPVTQHDRIWEIYLRFVEQEGIPIETSLRVYRRYLKYDPSHIEDFIEFLVKSKLWQEAAE 191
LPV QH R+ ++ L+F + G P TS+++++RY+ P E + L+K EAA
Sbjct: 124 LPVQQHPRVLKLALQFGTKVGGP--TSVQIWKRYVLAYPDQKETMAQSLIKMGYHGEAAV 181
Query: 192 RLASVLNDDQFYSIKGKTKHRLWLELCDLLTTHATEISGLNVDAIIRGGIRKFTDEVGRL 251
L +LN + LW EL DL+ V+ II GI++F D+ G L
Sbjct: 182 VLIELLN-------ASGDNYALWTELVDLIGESDKLTLEPPVEQIISSGIKRFPDQRGPL 234
Query: 252 WTSLADYYIRRELFEKARDIFEEGMMTVVTVRDFSVIFDSYSQFEEIMVSAKMAKPDLSV 311
LA++ +R E ARD+FE+G+ T TVRDF+V+FD+Y++FEE +V+ +
Sbjct: 235 TVQLANFLVRNGDLESARDVFEDGITTANTVRDFTVVFDAYAEFEERIVTHLI------- 287
Query: 312 EEEEDDEEHGSAEDEDIRLDVNLSMAEFVKKVLNGFWLHDVKDVDLRLARLEHLMNRRPE 371
E+E MA DLR+A+L+HL+ RRP
Sbjct: 288 ------------ENES-------PMA------------------DLRIAKLDHLLERRPF 310
Query: 372 LANSVLLRQNPHNVEQWHRRVKIFEGNPTKQILTYTEAVRTVDPMKAVGKPHTLWVAFAK 431
L + V LR+ P++V +W +R+ ++E +P + + YTEAV+++ P KA GK LW+++AK
Sbjct: 311 LISDVRLRREPYSVLEWQKRIALYE-DPAETVAAYTEAVQSIPPAKADGKLSQLWISWAK 369
Query: 432 LYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMRRATAEP 491
Y +D A I+ KA V YK+V LA ++ W++ E + +++ A++++++A P
Sbjct: 370 FYA--EDRETACEIYHKATLVPYKSVSELADVYLAWSQYESENDHWENAVKIIKQALESP 427
Query: 492 SVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILDLRIATPQI 551
+ V + + Q ++HKS+RLW++Y DL ES G E T+ VYE+I+ L + TP
Sbjct: 428 NTHVSYH---NSDLTAQDRIHKSVRLWSYYADLVESYGTFEETKQVYEKIMALDLLTPLF 484
Query: 552 IINYALLLE 560
++NYA LLE
Sbjct: 485 VVNYATLLE 493
>sp|Q6BQ23|SYF1_DEBHA Pre-mRNA-splicing factor SYF1 OS=Debaryomyces hansenii (strain ATCC
36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=SYF1 PE=3 SV=2
Length = 850
Score = 288 bits (736), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 193/603 (32%), Positives = 321/603 (53%), Gaps = 90/603 (14%)
Query: 11 EDDLLYEEELLRNPFSLKLWWRYLVAKREAP---FKKRFVIYERALKALPGSYKLWHAYL 67
EDD+ YE+E+ +NP +L W RY K F+ R I ERA+K LP SYKLW Y+
Sbjct: 14 EDDIPYEQEVAKNPNNLSNWLRYYRFKSSTSSCTFQNRVFILERAVKQLPRSYKLWMIYI 73
Query: 68 IERLSIVKNLPITHPEYETL--NNTFERALVTMHKMPRIWIMYLETLT-SQKF-ITKARR 123
L V+ + E L N FER+L +++ P +WI YLE L +Q + IT RR
Sbjct: 74 DVVLQEVQTSVSYKSKSEILSVNMVFERSLQLLNRAPILWIKYLEFLVETQPYEITLLRR 133
Query: 124 TFDRALCALPVTQHDRIWEIYLRFVEQEGIPIETSLRVYRRYLKY-DPSH---------- 172
F+ L LP++QH IW +Y+RF + G T ++VY +YL+Y +P
Sbjct: 134 KFNECLYNLPISQHHLIWPLYIRFADDVGGM--TGVKVYLKYLQYANPESLQGLNNEQEG 191
Query: 173 -----IEDFIEFLVKSKLWQEAAERLASVL-NDDQFYSIKGKTKHRLWLELCDLLTTHAT 226
I+D I LV+ +EA++ +L + D+F + K+ +LW+E DLL +
Sbjct: 192 ELGITIDDIISKLVEFGDVKEASKLFQHILQHTDKFIGL-SKSPLQLWIEYIDLLVNSVS 250
Query: 227 EISGLNVD---------AIIRGGIRKFTDEVGRLWTSLADYYIRRELFEKARDIFEEGMM 277
+ V+ +I+ G++KF D++G+ + L Y+I+R+ KAR F+EG+
Sbjct: 251 KNKRSTVNYNEFDYFFEKLIKDGLQKFPDQIGKFYLKLTFYFIKRKNLFKARYYFDEGLK 310
Query: 278 TVVTVRDFSVIFDSYSQFEEIMVSAKMAKPDLSVEEEEDDEEHGSAEDEDIRLDVNLSMA 337
T V+V+DF++IFDSY++FEE +++ K E+ G ED D+
Sbjct: 311 TCVSVKDFTMIFDSYTEFEENILTNMSEKL----------EKLG--EDSDLN-------- 350
Query: 338 EFVKKVLNGFWLHDVKDVDLRLARLEHLMNRRPELANSVLLRQNPHNVEQWHRRVKIFEG 397
++DLR+ E L+N RP L N ++LRQ+ +N+++W +++ +++
Sbjct: 351 ---------------NELDLRMNVFEKLINDRPYLLNDMMLRQDVNNLDEWFKKIVLYKK 395
Query: 398 NPTKQIL--TYTEAVRTVDPMKAVG----KPHT---LWVAFAKLYETYKDIANARVIFDK 448
+ ++ TY A+RT++P+KA K +T LW+ +A +Y + D+ A +IF K
Sbjct: 396 DSDINMMLDTYAAALRTINPLKAHSLANKKENTLPNLWINYANVYASQNDVKTANLIFSK 455
Query: 449 AVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMRRATAEPSVEVRRRVAADGNEPVQ 508
+V+ +++ D LA+++ EW E+ ++H + K A+E++ E + D + +
Sbjct: 456 SVKSQFQSPDDLATLYIEWCELFVKHNDDKKAIEIVEDICTS---ERGKFDYNDSSIDIH 512
Query: 509 MKLHKSLRLWTFYVDLEESL-------GNLESTRAVYERILDLRIATPQIIINYALLLEV 561
+++ KS++LW+FY+DL ES+ +E Y +DL+IATP IIN+A LE
Sbjct: 513 IRVQKSIKLWSFYLDLLESMIENNNQIDEIEKVINAYNITIDLKIATPLTIINFANFLEE 572
Query: 562 WTL 564
W
Sbjct: 573 WNF 575
>sp|P0CO08|SYF1_CRYNJ Pre-mRNA-splicing factor SYF1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=SYF1 PE=3 SV=1
Length = 1031
Score = 260 bits (665), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 141/343 (41%), Positives = 210/343 (61%), Gaps = 43/343 (12%)
Query: 231 LNVDAII-RGGIRKFTDEVGRLWTSLADYYIRRELFEKARDIFEEGMMTVVTVRDFSVIF 289
L+V+ I+ R G++ + D+ GRLWT LA Y+I+R FE+A FE G+ VVT+RDF+ IF
Sbjct: 419 LDVEGIVERDGLQVYKDQAGRLWTGLATYWIKRGEFERATATFERGLAAVVTIRDFTQIF 478
Query: 290 DSYSQFEEIMVSAKMAKPDLSVEEEEDDEEHGSAEDEDIRLDVNLSMAEFVKKVLNGFWL 349
D+Y++F E M+S M L+ E+ +DE+ + E E
Sbjct: 479 DAYAEFSETMISTLMDA--LADEDNLEDEDFDAEETE----------------------- 513
Query: 350 HDVKDVDLRLARLEHLMNRRPELANSVLLRQNPHNVEQWHRRVKIFEGNPTKQILTYTEA 409
+++D R+ E LM+RRP L N VLLR+NP+ V +W +R+ + + K + Y +A
Sbjct: 514 ---QELDERMKSFEELMDRRPFLVNDVLLRRNPNEVVEWEKRIALHGDDDAKVVEAYVKA 570
Query: 410 VRTVDPMKAVGKPHTLWVAFAKLYE------------TYKDIANARVIFDKAVQVNYKTV 457
+ T++P KA G + L+V FAK YE D+ AR IF++A +V +K V
Sbjct: 571 LDTINPRKATGPLYPLYVNFAKFYEEGGSKDDNGEPRNEPDLEQARKIFERATKVPFKAV 630
Query: 458 DHLASIWCEWAEMELRHKNFKGALELMRRATAEPSVEVRRRVAADGNEPVQMKLHKSLRL 517
D LA +WCEWAEMELR++N++ A+ LM+RAT P + + D N P Q +L KSL+L
Sbjct: 631 DELAEVWCEWAEMELRNENYEEAIRLMQRATTVP--KNTKINYYDDNIPPQSRLFKSLKL 688
Query: 518 WTFYVDLEESLGNLESTRAVYERILDLRIATPQIIINYALLLE 560
W++Y DLEES+G +EST+AVY++I++L+IA Q+I+NYA LE
Sbjct: 689 WSYYSDLEESIGTVESTKAVYDKIMELKIANAQVIVNYATFLE 731
Score = 95.9 bits (237), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 134/305 (43%), Gaps = 85/305 (27%)
Query: 7 LYPSEDDLLYEEELLRNPFSLKLWWRY----------------------------LVAKR 38
L PS D L EE+LL NP +L+ W Y L +K
Sbjct: 29 LIPSAD-LPVEEDLLHNPENLRSWLSYIHNVKEKIAADEPAKGGVLSPEEEILGPLASKN 87
Query: 39 EAPFKKRFV-IYERALKALPGSYKLWHAYLIERLSIVK---------------------- 75
+R V IYERA+ P SYKLW AY + R S V
Sbjct: 88 ARDGLQRLVSIYERAIAVFPTSYKLWKAYYLTRQSYVLGELTNDAKEARSQQAKRGAAYK 147
Query: 76 --------------------NLPITHPEYETLNNTFERALVTMHKMPRIWIMYLETLTSQ 115
+ + + E+ +L T ER ++ + +P W+++L L
Sbjct: 148 TNVRELLDGAEEAHEWTGGLDPVVGYAEWRSLVATGERMIMCLPNLPIPWLLHLGVLLHP 207
Query: 116 KFIT------KARRTFDRALCALPVTQHDRIWEIYLRFVEQEGIPIETSLRVYRRYLKYD 169
K + ARR FDRAL LP + H R+W +YLR+ E G + RV+RRYLK D
Sbjct: 208 KCPSVFKNGSYARRAFDRALRTLPPSLHGRVWGLYLRWAEIVG--GDAGERVWRRYLKVD 265
Query: 170 PSHIEDFIEFLVKSKLWQE--AAERLASVLNDDQ---FYSIKGKTKHRLWLELCDLLTTH 224
PS E I +L++++ + AA+ L S+ Q + S++GK+ ++L+++ +L+ +
Sbjct: 266 PSLTERHITYLLEAEEPRPLAAAKYLLSIARRAQQNLYSSLEGKSPYQLFVDFLELVEKY 325
Query: 225 ATEIS 229
A +I
Sbjct: 326 ADQIG 330
>sp|P0CO09|SYF1_CRYNB Pre-mRNA-splicing factor SYF1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=SYF1 PE=3 SV=1
Length = 1031
Score = 260 bits (665), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 141/343 (41%), Positives = 210/343 (61%), Gaps = 43/343 (12%)
Query: 231 LNVDAII-RGGIRKFTDEVGRLWTSLADYYIRRELFEKARDIFEEGMMTVVTVRDFSVIF 289
L+V+ I+ R G++ + D+ GRLWT LA Y+I+R FE+A FE G+ VVT+RDF+ IF
Sbjct: 419 LDVEGIVERDGLQVYKDQAGRLWTGLATYWIKRGEFERATATFERGLAAVVTIRDFTQIF 478
Query: 290 DSYSQFEEIMVSAKMAKPDLSVEEEEDDEEHGSAEDEDIRLDVNLSMAEFVKKVLNGFWL 349
D+Y++F E M+S M L+ E+ +DE+ + E E
Sbjct: 479 DAYAEFSETMISTLMDA--LADEDNLEDEDFDAEETE----------------------- 513
Query: 350 HDVKDVDLRLARLEHLMNRRPELANSVLLRQNPHNVEQWHRRVKIFEGNPTKQILTYTEA 409
+++D R+ E LM+RRP L N VLLR+NP+ V +W +R+ + + K + Y +A
Sbjct: 514 ---QELDERMKSFEELMDRRPFLVNDVLLRRNPNEVVEWEKRIALHGDDDAKVVEAYVKA 570
Query: 410 VRTVDPMKAVGKPHTLWVAFAKLYE------------TYKDIANARVIFDKAVQVNYKTV 457
+ T++P KA G + L+V FAK YE D+ AR IF++A +V +K V
Sbjct: 571 LDTINPRKATGPLYPLYVNFAKFYEEGGSKDDNGEPRNEPDLEQARKIFERATKVPFKAV 630
Query: 458 DHLASIWCEWAEMELRHKNFKGALELMRRATAEPSVEVRRRVAADGNEPVQMKLHKSLRL 517
D LA +WCEWAEMELR++N++ A+ LM+RAT P + + D N P Q +L KSL+L
Sbjct: 631 DELAEVWCEWAEMELRNENYEEAIRLMQRATTVP--KNTKINYYDDNIPPQSRLFKSLKL 688
Query: 518 WTFYVDLEESLGNLESTRAVYERILDLRIATPQIIINYALLLE 560
W++Y DLEES+G +EST+AVY++I++L+IA Q+I+NYA LE
Sbjct: 689 WSYYSDLEESIGTVESTKAVYDKIMELKIANAQVIVNYATFLE 731
Score = 95.9 bits (237), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 134/305 (43%), Gaps = 85/305 (27%)
Query: 7 LYPSEDDLLYEEELLRNPFSLKLWWRY----------------------------LVAKR 38
L PS D L EE+LL NP +L+ W Y L +K
Sbjct: 29 LIPSAD-LPVEEDLLHNPENLRSWLSYIHNVKEKIAADEPAKGGVLSPEEEILGPLASKN 87
Query: 39 EAPFKKRFV-IYERALKALPGSYKLWHAYLIERLSIVK---------------------- 75
+R V IYERA+ P SYKLW AY + R S V
Sbjct: 88 ARDGLQRLVSIYERAIAVFPTSYKLWKAYYLTRQSYVLGELTNDAKEARSQQAKRGAAYK 147
Query: 76 --------------------NLPITHPEYETLNNTFERALVTMHKMPRIWIMYLETLTSQ 115
+ + + E+ +L T ER ++ + +P W+++L L
Sbjct: 148 TNVRELLDGAEEAHEWTGGLDPVVGYAEWRSLVATGERMIMCLPNLPIPWLLHLGVLLHP 207
Query: 116 KFIT------KARRTFDRALCALPVTQHDRIWEIYLRFVEQEGIPIETSLRVYRRYLKYD 169
K + ARR FDRAL LP + H R+W +YLR+ E G + RV+RRYLK D
Sbjct: 208 KCPSVFKNGSYARRAFDRALRTLPPSLHGRVWGLYLRWAEIVG--GDAGERVWRRYLKVD 265
Query: 170 PSHIEDFIEFLVKSKLWQE--AAERLASVLNDDQ---FYSIKGKTKHRLWLELCDLLTTH 224
PS E I +L++++ + AA+ L S+ Q + S++GK+ ++L+++ +L+ +
Sbjct: 266 PSLTERHITYLLEAEEPRPLAAAKYLLSIARRAQQNLYSSLEGKSPYQLFVDFLELVEKY 325
Query: 225 ATEIS 229
A +I
Sbjct: 326 ADQIG 330
>sp|Q4P7S1|SYF1_USTMA Pre-mRNA-splicing factor SYF1 OS=Ustilago maydis (strain 521 / FGSC
9021) GN=SYF1 PE=3 SV=1
Length = 1081
Score = 255 bits (651), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 150/365 (41%), Positives = 210/365 (57%), Gaps = 51/365 (13%)
Query: 223 THATEISGLNVDAII-RGGIRKFTDEVGRLWTSLADYYIRRELFEKARDIFEEGMMTVVT 281
T A + + LNV AII + G+ KF+D+ GRLWT LA Y+I+R F+ ARD FE G+ TV T
Sbjct: 438 TDALDPTRLNVTAIIQKDGLDKFSDQSGRLWTGLATYWIKRGEFDVARDTFEAGIQTVKT 497
Query: 282 VRDFSVIFDSYSQFEEIMVSAKMAKPDLSVEEEEDDEEHGSAEDEDIRLDVNLSMAEFVK 341
VRDF+ IFD+Y++ E +++ M +E EE G E + + E
Sbjct: 498 VRDFTQIFDAYAETSENVIAFMM---------DELTEEGGDEEADAEDQEETREDKE--- 545
Query: 342 KVLNGFWLHDVKDVDLRLARLEHLMNRRPELANSVLLRQNPHNVEQWHRRVKIFEGNPTK 401
++D R+ E L+ RRP L N VLLR+NP +V++W +RV ++ N K
Sbjct: 546 -----------AELDRRMQEFEELIERRPLLVNDVLLRRNPDDVQEWEKRVMLYGDNDEK 594
Query: 402 QILTYTEAVRTVDPMKAVGKPHTLWVAFAKLYE--------------------------T 435
I TY EA++ ++P KA H L++ FA+ YE
Sbjct: 595 IIETYREAIQKINPRKATPNFHQLFLNFAQFYEYGGSAGLAKRMAEGVEGQEEEEQAEQV 654
Query: 436 YKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMRRATAEPSVEV 495
D+ +AR IF+KA+ + ++ VD LA IWCEWAEMELRH N+ A+ M R+ A P
Sbjct: 655 EGDLESARKIFEKAITIPFRRVDDLAEIWCEWAEMELRHSNYDEAIRTMARSVAPPR-NT 713
Query: 496 RRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILDLRIATPQIIINY 555
+ D P Q +L KSL+LW+FYVDLEESLG++EST+ VYE++L+L+IA+ QIIINY
Sbjct: 714 KGIQYHDDTLPPQTRLFKSLKLWSFYVDLEESLGDVESTKRVYEKMLELKIASAQIIINY 773
Query: 556 ALLLE 560
A LE
Sbjct: 774 AAFLE 778
Score = 100 bits (249), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 105/252 (41%), Gaps = 82/252 (32%)
Query: 13 DLLYEEELLRNPFSLKLWWRYL-------VAKREAP-----------------------F 42
D+L E+ELLRNP + + W Y+ V KR P
Sbjct: 60 DILLEQELLRNPDNFRSWSSYIDHIINTNVVKRPPPDVSLTTYQAALLGPLASSTQRTAL 119
Query: 43 KKRFVIYERALKALPGSYKLWHAYLIERLSIVKNLP------------------------ 78
++ IYERAL P Y LW YL R V P
Sbjct: 120 RRLTSIYERALAQFPTRYSLWRDYLQNRSRFVLGDPKGGSDAKRKRDLQAAREKLDFGPT 179
Query: 79 ---------------------ITHPEYETLNNTFERALVTMHKMPRIWIMYLETLTSQKF 117
+ E+++L +ERAL+ + MPR+W+ YL +
Sbjct: 180 LIDSVEDEDFGSAYRGGLDGTVGWQEWKSLAALYERALMWLPTMPRLWLSYLSMFIHPQC 239
Query: 118 -----ITKARRTFDRALCALPVTQHDRIWEIYLRFVEQEGIPIETSLRVYRRYLKYDPSH 172
T ARRTFDRAL LP + H R+W++YL++ E+ G ET LRV+RRYL+ DPS
Sbjct: 240 PPILSFTHARRTFDRALRTLPGSLHLRVWKVYLKWAERRG--GETCLRVWRRYLRVDPSL 297
Query: 173 IEDFIEFLVKSK 184
E ++ L+ +
Sbjct: 298 TERYVSILLAQR 309
>sp|Q75EF0|SYF1_ASHGO Pre-mRNA-splicing factor SYF1 OS=Ashbya gossypii (strain ATCC 10895
/ CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=SYF1 PE=3
SV=2
Length = 803
Score = 163 bits (413), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 149/602 (24%), Positives = 262/602 (43%), Gaps = 98/602 (16%)
Query: 8 YPSEDDLLYEEELLRNPFSLKLWWRYLVAKREAPFKKRFVIYERALKALPGSYKLWHAYL 67
+ + +DL++E +L+ P S+ W RY+ AKR+ P +V YER L+ALP +++W YL
Sbjct: 4 FVTAEDLVHEYSVLQEPDSVVNWSRYIAAKRDDPCSVSWV-YERCLQALPAQWEVWREYL 62
Query: 68 IERLSIVKNL-PITHP-EYETLNNTFERALVTMHKMPRIWIMYLETLTSQKFITKARRTF 125
R+ ++ + + H E+E +N F R + + W ++L Q + R+
Sbjct: 63 QFRMRLLDGVCAVQHAAEFEKVNRLFWRCVEHNAAVVEAWRLFLGHAQRQGALALVRQVV 122
Query: 126 DRALCALPVTQHDRIWEIYLRFVEQEGIPIETSLRVYRRYLKYDPSHIEDFIEFLVKSKL 185
D AL + + +H +WE + ++E E +P E + D +D E LV+ L
Sbjct: 123 DAALRGVGLAKHRTVWEDVVAYIE-ELLPAEET----------DLGEEQDLHE-LVRGAL 170
Query: 186 -------------WQEA-----------AERLASVLNDDQFYSI---------------K 206
W A AE + ++L Y+ K
Sbjct: 171 FGGAGAEDAGADIWSSAMLRRYIQVAEDAEAVLALLQRTHDYATVVAVYEKHVLPVTRAK 230
Query: 207 GKTKHRLWLELCDLLTTHATEISGLNVDAIIRGGIRKFTDEVGRLWTSLADYYIRRELFE 266
K + + L+ T + DA+ R + F + L LA +Y+++ +
Sbjct: 231 HKGRQSYESQFRYLVALDHTGATAKLEDAVARCA-QLFPERAPSLTIFLAKHYVKQGNYN 289
Query: 267 KARDIFEEGMMTVVTVRDFSVIFDSYSQFEEIMVSAKMAKPDLSVEEEEDDEEHGSAEDE 326
+ D+ + + +F+ ++D FEE ++ + ++E ++EE A
Sbjct: 290 RCTDVLTDSLKHTAKSSEFASLYDFLVVFEESLIEVVLEH----LQEHPENEERWGA--- 342
Query: 327 DIRLDVNLSMAEFVKKVLNGFWLHDVKDVDLRLARLEHLMNRRPELANSVLLRQNPHNVE 386
D++ +L+ L+ L N + LRQ P NV+
Sbjct: 343 ---------------------------DLERHTDQLDGLLADHALLLNDLKLRQEPDNVK 375
Query: 387 QWHRRVKIFEGNPTKQILTYTEAVRTVD--PMKAVGKPHTLWVAFAKLYETYKDIANARV 444
W RV++F+ +K + Y +A+ +++ G+ TLW +A+LY A+
Sbjct: 376 HWLDRVELFDKAASKASV-YADAIASINYKSQTVPGQLGTLWWQYAQLYIDDGQYETAKT 434
Query: 445 IFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMRRATAEPSVE--VRRRVAAD 502
I DKA+ V Y + IW +WAE EL+ A++++ A P +R + +
Sbjct: 435 ILDKALNVPYNFLQDPELIWTKWAEEELKRAGLDAAMQVLSHALQIPDDHELLRDKFESH 494
Query: 503 GNEPVQMKLHKSLRLWTFYVDL----EESLGNLESTRAVYERILDLRIATPQIIINYALL 558
P Q + SL+LW+FY+DL ES +LE T+A YE + L+IATP + +NYA
Sbjct: 495 EKMPAQTVIFSSLKLWSFYIDLLEASSESDEHLERTKAAYEATIQLKIATPLLFVNYAHY 554
Query: 559 LE 560
L+
Sbjct: 555 LQ 556
>sp|Q6CYA2|SYF1_KLULA Pre-mRNA-splicing factor SYF1 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=SYF1 PE=3 SV=1
Length = 798
Score = 140 bits (352), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 154/597 (25%), Positives = 259/597 (43%), Gaps = 87/597 (14%)
Query: 1 MAISKELYPSEDDLLYEEELLRNPFSLKLWWRYLVAKREAPFKKRFV-IYERALKALPGS 59
M I K + E+D+ +E ++R + W RYL KR A + +YER LK +
Sbjct: 1 MEIDK--FVKEEDIPFEYGVVRERDNAVSWSRYLATKRSAGDELNLDWLYERCLKEIKDD 58
Query: 60 YKLWHAYLIERLSIVKNLPI--THPEYETLNNTFERALVTMHKMPRIWIMYLETLTSQKF 117
+ LW +L R+ ++ + I EY ++ FE+ L + K+ WIMY+E + K
Sbjct: 59 WHLWKEFLKWRIELLNDCDIFRHKDEYNKISLLFEQCLTSCGKVGDAWIMYMEWVIQFKD 118
Query: 118 ITKARRTFDRALCALPVTQHDRIWEIYLRFVEQEGIPIETSLRVYRRYLKYDPSHIEDFI 177
+ + R +AL ++ H+ IW + + F+ I L +RY +ED I
Sbjct: 119 LKRIRELLGKALRSMSWEYHEAIWRVVIDFI------INELLIDNKRY----ELSLEDSI 168
Query: 178 EFLV--------KSKLWQEAAERLASVLNDDQ-------FYSIKGKTKHRLW-------- 214
+ V + LW + + S++ DD F + T R++
Sbjct: 169 YYFVHGEHSTNFDTDLWSSSILQRYSLICDDIEPLLIYIFKTHDWSTIVRVFEKHLSPNL 228
Query: 215 ----LELCDLLTTHATEI----SGLNVDAIIRGGIRKFTDEVGRLWTSLADYYIRRELFE 266
L +L ++ T + + V A++ I F + G L T L IR+
Sbjct: 229 KPSQTSLFELYVSYITSMILVDNSAGVAAVVDQCIELFPFKKGELKTYLIFNLIRQGKIT 288
Query: 267 KARDIFEEGMMTVVTVRDFSVIFDSYSQFEEIMVSAKMAKPDLSVEEEEDDEEHGSAEDE 326
+A E+ + + +FSV++D + + EE++ + K +DD
Sbjct: 289 EAELYLEKVISETKDIIEFSVLYDFWIRMEELLTQELIQKM-------KDDNSEKQRLFA 341
Query: 327 DIRLDVNLSMAEFVKKVLNGFWLHDVKDVDLRLARLEHLMNRRPELANSVLLRQNPHNVE 386
+IRL + L +K+ +RL LE LR+ P+N++
Sbjct: 342 NIRLHAD---------TLTSL----IKNHTIRLNDLE--------------LRREPNNIK 374
Query: 387 QWHRRVKIFEGNPTKQILTYTEAVRTVD--PMKAVGKPHTLWVAFAKLYETYKDIANARV 444
W RVK+F+ K + Y +AV TVD G LW + +L+E +DI + V
Sbjct: 375 LWLERVKLFDTISDKAKV-YADAVLTVDYRLQTTPGLLGELWCQYCRLFE--EDIEKSEV 431
Query: 445 IFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMRRATAEP-SVEVRRRVAADG 503
+ DKA V +K + L ++W W E L+ ++ A++++ P + E+ + G
Sbjct: 432 LLDKATNVPFKFLVDLENVWLYWCEYRLK-RSIDDAIKVLSVVLEIPDNHELLLQKFEKG 490
Query: 504 NEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILDLRIATPQIIINYALLLE 560
P Q + S RLW Y+DL E GN + YE + ++ ATP + INYALL E
Sbjct: 491 ESPAQAAIFSSKRLWAMYLDLLEVKGNYGTAVNAYETAILIKAATPAMFINYALLNE 547
Score = 37.7 bits (86), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 49/122 (40%), Gaps = 8/122 (6%)
Query: 52 ALKALPGSYKLWHAYLIERLSIVKNLPITHPEYETLNNTFERALVTMHKMPRIWIMYLET 111
A A+ S +LW YL +L Y T N +E A++ P ++I Y
Sbjct: 494 AQAAIFSSKRLWAMYL--------DLLEVKGNYGTAVNAYETAILIKAATPAMFINYALL 545
Query: 112 LTSQKFITKARRTFDRALCALPVTQHDRIWEIYLRFVEQEGIPIETSLRVYRRYLKYDPS 171
S +A F+R++ P + IW+IYL + I E ++ +K S
Sbjct: 546 NESSGHQAEALAVFERSVEIFPPSVSKSIWDIYLDVALKADITKEQKRDIFESAIKLAAS 605
Query: 172 HI 173
+
Sbjct: 606 GV 607
>sp|Q6FUJ7|SYF1_CANGA Pre-mRNA-splicing factor SYF1 OS=Candida glabrata (strain ATCC 2001
/ CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=SYF1
PE=3 SV=1
Length = 835
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 154/321 (47%), Gaps = 42/321 (13%)
Query: 255 LADYYIRRELFEKARDIFEEGMMTVVTVRDFSVIFDSYSQFEEIMVSAKMAKPDLSVEEE 314
LAD++++R F+K + + + V +F I+ + FE+ V +E
Sbjct: 305 LADFHMKRADFDKMEKVLTKALSETVKTNEFIAIYTYHVNFEQAYVETIF-------DEM 357
Query: 315 EDDEEHGSAEDEDIRLDVNLSMAEFVKKVLNGFWLHDVKDVDLRLARLEHLMNRRPELAN 374
DD E + KK W ++ D L L L +R L N
Sbjct: 358 RDDPE-----------------IQVQKK-----WKSEMDD---HLIILGDLTSRYHLLVN 392
Query: 375 SVLLRQNPHNVEQWHRRVKIFEGNPTKQILTYTEAVRTVDPMKAVGKPH----TLWVAFA 430
+ +RQNP++V W R +FE + K+ + EA++T+DP+K K + LW +A
Sbjct: 393 DLKIRQNPNSVSNWLERTTLFE-DFDKKCEVFVEAIKTIDPIKVKDKEYGMLGKLWCDYA 451
Query: 431 KLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMRRA-TA 489
K+Y + K AR I++ A +V + + L +W WA E + N + AL+++R+A T
Sbjct: 452 KVYWSNKSYEEARTIYESATKVPFPDLQDLEIVWHTWAVNEFQIHNIERALKILRKALTV 511
Query: 490 EPSVE--VRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAV--YERILDLR 545
PS E + R + + P Q L S RLW +Y+DL ES+ +++ + Y+ ++ L+
Sbjct: 512 PPSYESIIDRFKSENRRLPSQTILFTSKRLWNYYIDLLESIPTIDANDVIRAYDTLMTLK 571
Query: 546 IATPQIIINYALLLEVWTLLH 566
+ TP I+NYA L+ LH
Sbjct: 572 LITPVGILNYATFLKQNNNLH 592
>sp|Q04048|SYF1_YEAST Pre-mRNA-splicing factor SYF1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=SYF1 PE=1 SV=1
Length = 859
Score = 103 bits (256), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 145/322 (45%), Gaps = 48/322 (14%)
Query: 254 SLADYYIRRELFEKARDIFEEGMMTVVTVRDFSVIFDSYSQFEEIMVSAKMAKPDLSVEE 313
SLA YYI R + D+ ++ + + DF I++ Y FE+ + K
Sbjct: 308 SLAKYYISRGRLDSCGDLLKKSLQQTLRYSDFDRIYNFYLLFEQECSQFILGKL------ 361
Query: 314 EEDDEEHGSAEDEDIRLDVNLSMAEFVKKVLNGFWLHDVKDVDLRLARLEHLMNRRPELA 373
+E+D + + +D W + + +A E L+N
Sbjct: 362 KENDSKFFNQKD----------------------W---TEKLQAHMATFESLINLYDIYL 396
Query: 374 NSVLLRQNPHNVEQWHRRVKIFEGNPTKQILTYTEAVRTVDPMKAVGKPHT---LWVAFA 430
N V LRQ+ + VE W +RV + + + ++ Y+EA+ +DP K VG P + LW ++
Sbjct: 397 NDVALRQDSNLVETWMKRVSL-QKSAAEKCNVYSEAILKIDPRK-VGTPGSFGRLWCSYG 454
Query: 431 KLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMRRA--- 487
LY I+ AR ++ ++++V Y ++ L I+ WA+ EL + + A ++ A
Sbjct: 455 DLYWRSNAISTARELWTQSLKVPYPYIEDLEEIYLNWADRELDKEGVERAFSILEDALHV 514
Query: 488 TAEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLES---------TRAVY 538
P + + + P Q L SLR+W+ Y+D E+ ++ T+ Y
Sbjct: 515 PTNPEILLEKYKNGHRKIPAQTVLFNSLRIWSKYIDYLEAYCPKDANSSDKIFNKTKMAY 574
Query: 539 ERILDLRIATPQIIINYALLLE 560
++DLR+ TP + N+AL L+
Sbjct: 575 NTVIDLRLITPAMAENFALFLQ 596
Score = 38.1 bits (87), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 67/149 (44%), Gaps = 9/149 (6%)
Query: 10 SEDDLLYEEELLRNPFSLKLWWRYLVAKREAPFKKRFV--IYERALKALPGSYKLWHAYL 67
+++D+ +E E+ + P ++ W RY+ +E + + +YER +W Y+
Sbjct: 20 NDEDVAFEYEIQKTPQNILTWKRYIEYWKEEGRTDKQIRWLYERFCSQFVTDTSIWEDYI 79
Query: 68 IERLSIVKNLPITHPEYETLNNTFERALVT-MHKMPRIWIMYLETLTSQKFITKARRTFD 126
R K + E + F+R L + + RI + YLE Q + R
Sbjct: 80 --RWESTKEVV----ETSRIFWLFQRCLKSCVRDCDRICLSYLELAIEQYDLAMIRHALA 133
Query: 127 RALCALPVTQHDRIWEIYLRFVEQEGIPI 155
+L + H ++W+ ++FVE++ +P+
Sbjct: 134 SSLMKMEREMHRKVWDPVIKFVEEKVLPL 162
>sp|Q12309|CLF1_YEAST Pre-mRNA-splicing factor CLF1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=CLF1 PE=1 SV=1
Length = 687
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 100/479 (20%), Positives = 190/479 (39%), Gaps = 89/479 (18%)
Query: 89 NTFERALVTMHKMPRIWIMYLETLTSQKFITKARRTFDRALCALPVTQHDRIWEIYLRFV 148
+ FERAL+ +WI Y++ K I AR +RA+ LP D++W YL V
Sbjct: 86 SIFERALLVDSSFIPLWIRYIDAELKVKCINHARNLMNRAISTLPRV--DKLWYKYL-IV 142
Query: 149 EQEGIPIETSLRVYRRYLKYDP--SHIEDFIEFLVKSKLWQEAAERLASVLNDDQFYSIK 206
E+ +E +Y ++ +P + F++F ++ K W E + +
Sbjct: 143 EESLNNVEIVRSLYTKWCSLEPGVNAWNSFVDFEIRQKNWNGVREIYSKY--------VM 194
Query: 207 GKTKHRLWLELCDLLTTHAT-----EISGLNVDAIIR-GGIRKFTD-EVGRLWTSLADYY 259
+ + WL+ H + L +D + ++ ++D EV +L S A +
Sbjct: 195 AHPQMQTWLKWVRFENRHGNTEFTRSVYSLAIDTVANLQNLQIWSDMEVAKLVNSFAHWE 254
Query: 260 IRRELFEKARDIFE-------EGMMTVVTVRDFSVIFDSYSQFEEIMVSAKMAKPDLSVE 312
++ +E++ +++ + + DF F + EE + + + + +
Sbjct: 255 AAQQEYERSSALYQIAIEKWPSNQLLKAGLLDFEKQFGDINSIEETISYKRKMEYETIL- 313
Query: 313 EEEDDEEHGSAEDEDI-RLDVNLSMAEFVKKVLNGFWLHDVKDVDLRLARLEHLMNRRP- 370
+A D D L ++L F K+++ F + +++ RP
Sbjct: 314 -------SNNAYDYDTWWLYLDLISESFPKQIMQTF--------------EKAIVDSRPK 352
Query: 371 ELANSVLLRQNPHNVEQWHRRVKIFEGNPTKQILTYTEAVRTVDPMKAVGKPH------T 424
EL+ +V Q + W R + E +L R +D + PH
Sbjct: 353 ELSKNV---QWKRYIYLWMRYICYVELELENSLLEEELFQRLIDDI----IPHKHFTFSK 405
Query: 425 LWVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELM 484
+W+ +AK + D+ AR I KA+ + C + K FKG +EL
Sbjct: 406 IWLMYAKFLIRHDDVPKARKILGKAIGL------------CP------KAKTFKGYIEL- 446
Query: 485 RRATAEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILD 543
E ++ RV + ++ + L++W+ Y +LEE+LG+ + R +Y LD
Sbjct: 447 -----EVKLKEFDRVRKIYEKFIEFQ-PSDLQIWSQYGELEENLGDWDRVRGIYTIALD 499
Score = 39.7 bits (91), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 53/120 (44%), Gaps = 26/120 (21%)
Query: 426 WVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMR 485
W+ +A+ D+ AR IF++A+ V+ +W + + EL+ K A LM
Sbjct: 68 WIRYAQFEIEQHDMRRARSIFERALLVD----SSFIPLWIRYIDAELKVKCINHARNLMN 123
Query: 486 RATAE-PSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILDL 544
RA + P V+ +LW Y+ +EESL N+E R++Y + L
Sbjct: 124 RAISTLPRVD---------------------KLWYKYLIVEESLNNVEIVRSLYTKWCSL 162
Score = 34.7 bits (78), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 65/158 (41%), Gaps = 25/158 (15%)
Query: 16 YEEELLRNPFSLKLWWRYLVAKREAPFKKRFVIYERAL-----KALPGSYKLWHAYLIER 70
YE L N + WW YL E+ K+ +E+A+ K L + + W Y+
Sbjct: 309 YETILSNNAYDYDTWWLYLDLISESFPKQIMQTFEKAIVDSRPKELSKNVQ-WKRYIYLW 367
Query: 71 LSIVKNLPITHPEYETLNNTFERAL--VTMHK---MPRIWIMYLETLTSQKFITKARRTF 125
+ + + + F+R + + HK +IW+MY + L + KAR+
Sbjct: 368 MRYICYVELELENSLLEEELFQRLIDDIIPHKHFTFSKIWLMYAKFLIRHDDVPKARKIL 427
Query: 126 DRALCALP--------------VTQHDRIWEIYLRFVE 149
+A+ P + + DR+ +IY +F+E
Sbjct: 428 GKAIGLCPKAKTFKGYIELEVKLKEFDRVRKIYEKFIE 465
>sp|P63155|CRNL1_RAT Crooked neck-like protein 1 OS=Rattus norvegicus GN=Crnkl1 PE=2
SV=1
Length = 690
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 104/500 (20%), Positives = 196/500 (39%), Gaps = 108/500 (21%)
Query: 83 EYETLNNTFERALVTMHKMPRIWIMYLETLTSQKFITKARRTFDRALCALPVTQHDRIWE 142
E + + +ERAL ++ +W+ Y E + + AR +DRA+ LP ++ W
Sbjct: 96 EIQRARSIYERALDVDYRNITLWLKYAEMEMKNRQVNHARNIWDRAITTLPRV--NQFWY 153
Query: 143 IYLRFVEQEGIPIETSLRVYRRYLKYDPSHI--EDFIEFLVKSKLWQEAAERLASVLNDD 200
Y E G + + +V+ R++++ P +I F ++ K ER ++ +
Sbjct: 154 KYTYMEEMLG-NVAGARQVFERWMEWQPEEQAWHSYINFELRYK----EVERARTIY--E 206
Query: 201 QFYSIKGKTKHRLWLELCDLLTTHATEISGLNVDAIIRGGIRKFTDEVGRLWTSLADYYI 260
+F + K+ W++ HA Y+
Sbjct: 207 RFVLVHPAVKN--WIKYARFEEKHA--------------------------------YFA 232
Query: 261 R-RELFEKARDIFEEGMMTVVTVRDFSVIFDSYSQFEEIMVSAKMAKPDLSVEEEEDDEE 319
R+++E+A + F + M F+ ++ +FE + V K A +S +E ++
Sbjct: 233 HARKVYERAVEFFGDEHMDEHLYVAFAKFEENQKEFERVRVIYKYALDRISKQEAQE--- 289
Query: 320 HGSAEDEDIRLDVNLSMAEFVKKVLNGFWLHDVKDVDLRLARLEHLMNRRPELANSVLLR 379
L N ++ F KK + + D+ + RR + V +
Sbjct: 290 ----------LFKNYTI--FEKKFGDRRGIEDI-----------IVSKRRFQYEEEV--K 324
Query: 380 QNPHNVEQWHRRVKIFEGNPTKQIL--TYTEAVRTVDPMKAVGKPH-----TLWVAFAKL 432
NPHN + W +++ E + + Y A+ V P++ K H LWV +A L
Sbjct: 325 ANPHNYDAWFDYLRLVESDAEADTVREVYERAIANVPPIQE--KRHWKRYIYLWVNYA-L 381
Query: 433 YETY--KDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMRRATAE 490
YE KD R ++ ++++ A +W +A+ E+R KN L RRA
Sbjct: 382 YEELEAKDPERTRQVYQASLELIPHKKFTFAKMWLYYAQFEIRQKN----LPFARRALGT 437
Query: 491 PSVEVRRRVAADGNEPVQMKLHKSLRL-----------------WTFYVDLEESLGNLES 533
+ + G ++++L + R W + +LE LG++E
Sbjct: 438 SIGKCPKNKLFKGYIELELQLREFDRCRKLYEKFLEFGPENCTSWIKFAELETILGDIER 497
Query: 534 TRAVYE-RILDLRIATPQII 552
RA+YE I R+ P+++
Sbjct: 498 ARAIYELAISQPRLDMPEVL 517
Score = 53.5 bits (127), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 26/119 (21%)
Query: 426 WVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMR 485
W+ +A+ E+ K+I AR I+++A+ V+Y+ + ++W ++AEME++++ A +
Sbjct: 84 WIKYAQWEESLKEIQRARSIYERALDVDYRNI----TLWLKYAEMEMKNRQVNHARNIWD 139
Query: 486 RA-TAEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILD 543
RA T P V + W Y +EE LGN+ R V+ER ++
Sbjct: 140 RAITTLPRVN---------------------QFWYKYTYMEEMLGNVAGARQVFERWME 177
Score = 37.4 bits (85), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 58/290 (20%), Positives = 120/290 (41%), Gaps = 59/290 (20%)
Query: 16 YEEELLRNPFSLKLWWRYL-VAKREAPFKKRFVIYERALKALPGSYKLWH----AYLIER 70
YEEE+ NP + W+ YL + + +A +YERA+ +P + H YL
Sbjct: 319 YEEEVKANPHNYDAWFDYLRLVESDAEADTVREVYERAIANVPPIQEKRHWKRYIYLWVN 378
Query: 71 LSIVKNLPITHPEYETLNNTFERAL-VTMHK---MPRIWIMYLETLTSQKFITKARRTFD 126
++ + L P E ++ +L + HK ++W+ Y + QK + ARR
Sbjct: 379 YALYEELEAKDP--ERTRQVYQASLELIPHKKFTFAKMWLYYAQFEIRQKNLPFARRALG 436
Query: 127 RALCALPVTQHDRIWEIYLRFVEQEGIPIETSLRVYRRYLKYDPSHIEDFIEFLVKSKLW 186
++ P +++++ Y+ +E + + ++Y ++L++ P + +I+F
Sbjct: 437 TSIGKCP---KNKLFKGYIE-LELQLREFDRCRKLYEKFLEFGPENCTSWIKFA------ 486
Query: 187 QEAAERLASVLNDDQFYSIKGKTKHRLWLELCDLLTTHATEISGLNVDAIIRGGIRKFTD 246
L ++L D +E + A L++ +
Sbjct: 487 -----ELETILGD---------------IERARAIYELAISQPRLDMPEV---------- 516
Query: 247 EVGRLWTSLADYYIRRELFEKARDIFEEGMMTVVTVRDFSVIFDSYSQFE 296
LW S D+ I +E E+ R+++ + + V+ ++ S++QFE
Sbjct: 517 ----LWKSYIDFEIEQEETERTRNLYRQLLQRTQHVK----VWISFAQFE 558
>sp|P63154|CRNL1_MOUSE Crooked neck-like protein 1 OS=Mus musculus GN=Crnkl1 PE=2 SV=1
Length = 690
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 104/500 (20%), Positives = 196/500 (39%), Gaps = 108/500 (21%)
Query: 83 EYETLNNTFERALVTMHKMPRIWIMYLETLTSQKFITKARRTFDRALCALPVTQHDRIWE 142
E + + +ERAL ++ +W+ Y E + + AR +DRA+ LP ++ W
Sbjct: 96 EIQRARSIYERALDVDYRNITLWLKYAEMEMKNRQVNHARNIWDRAITTLPRV--NQFWY 153
Query: 143 IYLRFVEQEGIPIETSLRVYRRYLKYDPSHI--EDFIEFLVKSKLWQEAAERLASVLNDD 200
Y E G + + +V+ R++++ P +I F ++ K ER ++ +
Sbjct: 154 KYTYMEEMLG-NVAGARQVFERWMEWQPEEQAWHSYINFELRYK----EVERARTIY--E 206
Query: 201 QFYSIKGKTKHRLWLELCDLLTTHATEISGLNVDAIIRGGIRKFTDEVGRLWTSLADYYI 260
+F + K+ W++ HA Y+
Sbjct: 207 RFVLVHPAVKN--WIKYARFEEKHA--------------------------------YFA 232
Query: 261 R-RELFEKARDIFEEGMMTVVTVRDFSVIFDSYSQFEEIMVSAKMAKPDLSVEEEEDDEE 319
R+++E+A + F + M F+ ++ +FE + V K A +S +E ++
Sbjct: 233 HARKVYERAVEFFGDEHMDEHLYVAFAKFEENQKEFERVRVIYKYALDRISKQEAQE--- 289
Query: 320 HGSAEDEDIRLDVNLSMAEFVKKVLNGFWLHDVKDVDLRLARLEHLMNRRPELANSVLLR 379
L N ++ F KK + + D+ + RR + V +
Sbjct: 290 ----------LFKNYTI--FEKKFGDRRGIEDI-----------IVSKRRFQYEEEV--K 324
Query: 380 QNPHNVEQWHRRVKIFEGNPTKQIL--TYTEAVRTVDPMKAVGKPH-----TLWVAFAKL 432
NPHN + W +++ E + + Y A+ V P++ K H LWV +A L
Sbjct: 325 ANPHNYDAWFDYLRLVESDAEADTVREVYERAIANVPPIQE--KRHWKRYIYLWVNYA-L 381
Query: 433 YETY--KDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMRRATAE 490
YE KD R ++ ++++ A +W +A+ E+R KN L RRA
Sbjct: 382 YEELEAKDPERTRQVYQASLELIPHKKFTFAKMWLYYAQFEIRQKN----LPFARRALGT 437
Query: 491 PSVEVRRRVAADGNEPVQMKLHKSLRL-----------------WTFYVDLEESLGNLES 533
+ + G ++++L + R W + +LE LG++E
Sbjct: 438 SIGKCPKNKLFKGYIELELQLREFDRCRKLYEKFLEFGPENCTSWIKFAELETILGDIER 497
Query: 534 TRAVYE-RILDLRIATPQII 552
RA+YE I R+ P+++
Sbjct: 498 ARAIYELAISQPRLDMPEVL 517
Score = 53.5 bits (127), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 26/119 (21%)
Query: 426 WVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMR 485
W+ +A+ E+ K+I AR I+++A+ V+Y+ + ++W ++AEME++++ A +
Sbjct: 84 WIKYAQWEESLKEIQRARSIYERALDVDYRNI----TLWLKYAEMEMKNRQVNHARNIWD 139
Query: 486 RA-TAEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILD 543
RA T P V + W Y +EE LGN+ R V+ER ++
Sbjct: 140 RAITTLPRVN---------------------QFWYKYTYMEEMLGNVAGARQVFERWME 177
Score = 37.4 bits (85), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 58/290 (20%), Positives = 120/290 (41%), Gaps = 59/290 (20%)
Query: 16 YEEELLRNPFSLKLWWRYL-VAKREAPFKKRFVIYERALKALPGSYKLWH----AYLIER 70
YEEE+ NP + W+ YL + + +A +YERA+ +P + H YL
Sbjct: 319 YEEEVKANPHNYDAWFDYLRLVESDAEADTVREVYERAIANVPPIQEKRHWKRYIYLWVN 378
Query: 71 LSIVKNLPITHPEYETLNNTFERAL-VTMHK---MPRIWIMYLETLTSQKFITKARRTFD 126
++ + L P E ++ +L + HK ++W+ Y + QK + ARR
Sbjct: 379 YALYEELEAKDP--ERTRQVYQASLELIPHKKFTFAKMWLYYAQFEIRQKNLPFARRALG 436
Query: 127 RALCALPVTQHDRIWEIYLRFVEQEGIPIETSLRVYRRYLKYDPSHIEDFIEFLVKSKLW 186
++ P +++++ Y+ +E + + ++Y ++L++ P + +I+F
Sbjct: 437 TSIGKCP---KNKLFKGYIE-LELQLREFDRCRKLYEKFLEFGPENCTSWIKFA------ 486
Query: 187 QEAAERLASVLNDDQFYSIKGKTKHRLWLELCDLLTTHATEISGLNVDAIIRGGIRKFTD 246
L ++L D +E + A L++ +
Sbjct: 487 -----ELETILGD---------------IERARAIYELAISQPRLDMPEV---------- 516
Query: 247 EVGRLWTSLADYYIRRELFEKARDIFEEGMMTVVTVRDFSVIFDSYSQFE 296
LW S D+ I +E E+ R+++ + + V+ ++ S++QFE
Sbjct: 517 ----LWKSYIDFEIEQEETERTRNLYRQLLQRTQHVK----VWISFAQFE 558
>sp|P0CO10|CLF1_CRYNJ Pre-mRNA-splicing factor CLF1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=CLF1 PE=3 SV=1
Length = 726
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 125/553 (22%), Positives = 205/553 (37%), Gaps = 138/553 (24%)
Query: 80 THPEYETLNNTFERALVTMHKMPRIWIMYLETLTSQKFITKARRTFDRALCALPVTQHDR 139
+ EYE + FERAL + +WI Y + + I AR FDRA+ LP D
Sbjct: 87 SQNEYERSRSVFERALDVDPRSVDLWIKYTDMELKARNINHARNLFDRAITLLPRV--DA 144
Query: 140 IWEIYLRFVEQEGIPIETSLRVYRRYLKYDPSHIEDFIEFLVKSKLWQ---EAAERLASV 196
+W Y+ ++E+ + + + +++ R+++++P+ K WQ + ER +
Sbjct: 145 LWYKYV-YLEELLLNVSGARQIFERWMQWEPN-----------DKAWQSYIKLEERYNEL 192
Query: 197 LNDDQFYS--IKGKTKHRLWLELCDLLTTHATEISGLNVDAIIRGGIRKFTDE------V 248
Y I + + W+ V + + F DE
Sbjct: 193 DRASAIYERWIACRPIPKNWVTWAKFEEDRGQPDKAREV---FQTALEFFGDEEEQVEKA 249
Query: 249 GRLWTSLADYYIRRELFEKARDIFEEGMMTVVTVRDFSVIFDSYSQFEEIMVSAKMAKPD 308
++ + A R + FE+AR I++ + + + S ++ Y++FE
Sbjct: 250 QSVFAAFARMETRLKEFERARVIYKFALARLPRSKSAS-LYAQYTKFE------------ 296
Query: 309 LSVEEEEDDEEHGSAEDEDIRLDVNLSMAEFVKKVLNGFWLHDVKDVD--LRLARLEHLM 366
++HG R V L++ + +D + D LARLE
Sbjct: 297 ---------KQHGD------RAGVELTVLGKRRIQYEEELAYDPTNYDAWFSLARLEEDA 341
Query: 367 NRRPELANSVLLRQNPHNVEQWHRRVKIFEGNPTKQILTYTEAVRTVDPMKAVGKPH--- 423
R R++ +VE P + Y AV V P A+ K +
Sbjct: 342 YRAD--------REDGEDVE------------PMRVREVYERAVANVPP--ALEKRYWRR 379
Query: 424 --TLWVAFAKLYE-TYKDIANARVIFDKAVQ-VNYKTVDHLASIWCEWAEMELRH----- 474
LW+ +A E KD AR ++ AV+ V +KT A +W +A E+R
Sbjct: 380 YIYLWLQYAAFEEIDTKDYDRARDVYKAAVKLVPHKTF-TFAKLWLAYAYFEIRRLDVSA 438
Query: 475 ---------------KNFKGALELMRR----------------------------ATAEP 491
K F G +EL R E
Sbjct: 439 ARKVLGAGIGMCPKPKLFTGYIELEMRLREFDRVRTLYEKFLTYDPSLSSAWIQWTQVES 498
Query: 492 SVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILDLRIATPQI 551
+VE RV A VQ L +W Y+D E G E R +YER+L+ R + ++
Sbjct: 499 AVEDFERVRAIFELAVQQSLDMPEIVWKAYIDFEAGEGERERARNLYERLLE-RTSHVKV 557
Query: 552 IINYALLLEVWTL 564
I+YA L+E+ TL
Sbjct: 558 WISYA-LMEIATL 569
Score = 42.4 bits (98), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 67/148 (45%), Gaps = 18/148 (12%)
Query: 426 WVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMR 485
W +A+ + + +R +F++A+ V+ ++VD +W ++ +MEL+ +N A L
Sbjct: 78 WTKYAQWEASQNEYERSRSVFERALDVDPRSVD----LWIKYTDMELKARNINHARNLFD 133
Query: 486 RA-TAEPSVEV---------RRRVAADGNEPV---QMKLHKSLRLWTFYVDLEESLGNLE 532
RA T P V+ + G + M+ + + W Y+ LEE L+
Sbjct: 134 RAITLLPRVDALWYKYVYLEELLLNVSGARQIFERWMQWEPNDKAWQSYIKLEERYNELD 193
Query: 533 STRAVYERILDLRIATPQIIINYALLLE 560
A+YER + R P+ + +A E
Sbjct: 194 RASAIYERWIACR-PIPKNWVTWAKFEE 220
Score = 38.1 bits (87), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 64/131 (48%), Gaps = 16/131 (12%)
Query: 42 FKKRFVIYERALKALPGSYKLWHAYLIERLSIVKNLPITHPEYETLNNTFERALVTMHKM 101
+++ ++ERAL P S LW Y L K I H N F+RA+ + ++
Sbjct: 91 YERSRSVFERALDVDPRSVDLWIKYTDMEL---KARNINHA-----RNLFDRAITLLPRV 142
Query: 102 PRIW--IMYLETLTSQKFITKARRTFDRALCALPVTQHDRIWEIYLRFVEQEGIPIETSL 159
+W +YLE L ++ AR+ F+R + P +D+ W+ Y++ +E+ ++ +
Sbjct: 143 DALWYKYVYLEELLLN--VSGARQIFERWMQWEP---NDKAWQSYIK-LEERYNELDRAS 196
Query: 160 RVYRRYLKYDP 170
+Y R++ P
Sbjct: 197 AIYERWIACRP 207
>sp|P0CO11|CLF1_CRYNB Pre-mRNA-splicing factor CLF1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=CLF1 PE=3 SV=1
Length = 726
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 125/553 (22%), Positives = 205/553 (37%), Gaps = 138/553 (24%)
Query: 80 THPEYETLNNTFERALVTMHKMPRIWIMYLETLTSQKFITKARRTFDRALCALPVTQHDR 139
+ EYE + FERAL + +WI Y + + I AR FDRA+ LP D
Sbjct: 87 SQNEYERSRSVFERALDVDPRSVDLWIKYTDMELKARNINHARNLFDRAITLLPRV--DA 144
Query: 140 IWEIYLRFVEQEGIPIETSLRVYRRYLKYDPSHIEDFIEFLVKSKLWQ---EAAERLASV 196
+W Y+ ++E+ + + + +++ R+++++P+ K WQ + ER +
Sbjct: 145 LWYKYV-YLEELLLNVSGARQIFERWMQWEPN-----------DKAWQSYIKLEERYNEL 192
Query: 197 LNDDQFYS--IKGKTKHRLWLELCDLLTTHATEISGLNVDAIIRGGIRKFTDE------V 248
Y I + + W+ V + + F DE
Sbjct: 193 DRASAIYERWIACRPIPKNWVTWAKFEEDRGQPDKAREV---FQTALEFFGDEEEQVEKA 249
Query: 249 GRLWTSLADYYIRRELFEKARDIFEEGMMTVVTVRDFSVIFDSYSQFEEIMVSAKMAKPD 308
++ + A R + FE+AR I++ + + + S ++ Y++FE
Sbjct: 250 QSVFAAFARMETRLKEFERARVIYKFALARLPRSKSAS-LYAQYTKFE------------ 296
Query: 309 LSVEEEEDDEEHGSAEDEDIRLDVNLSMAEFVKKVLNGFWLHDVKDVD--LRLARLEHLM 366
++HG R V L++ + +D + D LARLE
Sbjct: 297 ---------KQHGD------RAGVELTVLGKRRIQYEEELAYDPTNYDAWFSLARLEEDA 341
Query: 367 NRRPELANSVLLRQNPHNVEQWHRRVKIFEGNPTKQILTYTEAVRTVDPMKAVGKPH--- 423
R R++ +VE P + Y AV V P A+ K +
Sbjct: 342 YRAD--------REDGEDVE------------PMRVREVYERAVANVPP--ALEKRYWRR 379
Query: 424 --TLWVAFAKLYE-TYKDIANARVIFDKAVQ-VNYKTVDHLASIWCEWAEMELRH----- 474
LW+ +A E KD AR ++ AV+ V +KT A +W +A E+R
Sbjct: 380 YIYLWLQYAAFEEIDTKDYDRARDVYKAAVKLVPHKTF-TFAKLWLAYAYFEIRRLDVSA 438
Query: 475 ---------------KNFKGALELMRR----------------------------ATAEP 491
K F G +EL R E
Sbjct: 439 ARKVLGAGIGMCPKPKLFTGYIELEMRLREFDRVRTLYEKFLTYDPSLSSAWIQWTQVES 498
Query: 492 SVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILDLRIATPQI 551
+VE RV A VQ L +W Y+D E G E R +YER+L+ R + ++
Sbjct: 499 AVEDFERVRAIFELAVQQSLDMPEIVWKAYIDFEAGEGERERARNLYERLLE-RTSHVKV 557
Query: 552 IINYALLLEVWTL 564
I+YA L+E+ TL
Sbjct: 558 WISYA-LMEIATL 569
Score = 42.4 bits (98), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 67/148 (45%), Gaps = 18/148 (12%)
Query: 426 WVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMR 485
W +A+ + + +R +F++A+ V+ ++VD +W ++ +MEL+ +N A L
Sbjct: 78 WTKYAQWEASQNEYERSRSVFERALDVDPRSVD----LWIKYTDMELKARNINHARNLFD 133
Query: 486 RA-TAEPSVEV---------RRRVAADGNEPV---QMKLHKSLRLWTFYVDLEESLGNLE 532
RA T P V+ + G + M+ + + W Y+ LEE L+
Sbjct: 134 RAITLLPRVDALWYKYVYLEELLLNVSGARQIFERWMQWEPNDKAWQSYIKLEERYNELD 193
Query: 533 STRAVYERILDLRIATPQIIINYALLLE 560
A+YER + R P+ + +A E
Sbjct: 194 RASAIYERWIACR-PIPKNWVTWAKFEE 220
Score = 38.1 bits (87), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 64/131 (48%), Gaps = 16/131 (12%)
Query: 42 FKKRFVIYERALKALPGSYKLWHAYLIERLSIVKNLPITHPEYETLNNTFERALVTMHKM 101
+++ ++ERAL P S LW Y L K I H N F+RA+ + ++
Sbjct: 91 YERSRSVFERALDVDPRSVDLWIKYTDMEL---KARNINHA-----RNLFDRAITLLPRV 142
Query: 102 PRIW--IMYLETLTSQKFITKARRTFDRALCALPVTQHDRIWEIYLRFVEQEGIPIETSL 159
+W +YLE L ++ AR+ F+R + P +D+ W+ Y++ +E+ ++ +
Sbjct: 143 DALWYKYVYLEELLLN--VSGARQIFERWMQWEP---NDKAWQSYIK-LEERYNELDRAS 196
Query: 160 RVYRRYLKYDP 170
+Y R++ P
Sbjct: 197 AIYERWIACRP 207
>sp|Q9BZJ0|CRNL1_HUMAN Crooked neck-like protein 1 OS=Homo sapiens GN=CRNKL1 PE=1 SV=4
Length = 848
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 26/119 (21%)
Query: 426 WVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMR 485
W+ +A+ E+ K+I AR I+++A+ V+Y+ + ++W ++AEME++++ A +
Sbjct: 245 WIKYAQWEESLKEIQRARSIYERALDVDYRNI----TLWLKYAEMEMKNRQVNHARNIWD 300
Query: 486 RA-TAEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILD 543
RA T P V + W Y +EE LGN+ R V+ER ++
Sbjct: 301 RAITTLPRVN---------------------QFWYKYTYMEEMLGNVAGARQVFERWME 338
Score = 46.2 bits (108), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 86/197 (43%), Gaps = 36/197 (18%)
Query: 378 LRQNPHNVEQWHRRVKIFEGNPTKQIL--TYTEAVRTVDPMKAVGKPH-----TLWVAFA 430
++ NPHN + W +++ E + + + Y A+ V P++ K H LW+ +A
Sbjct: 484 VKANPHNYDAWFDYLRLVESDAEAEAVREVYERAIANVPPIQE--KRHWKRYIYLWINYA 541
Query: 431 KLYETY--KDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMRRAT 488
LYE KD R ++ ++++ A +W +A+ E+R KN L L RRA
Sbjct: 542 -LYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWILYAQFEIRQKN----LSLARRAL 596
Query: 489 AEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILDLRIAT 548
+ G P +L+ Y++LE L + R +YE+ L+
Sbjct: 597 G----------TSIGKCPKN-------KLFKVYIELELQLREFDRCRKLYEKFLEF---G 636
Query: 549 PQIIINYALLLEVWTLL 565
P+ ++ E+ T+L
Sbjct: 637 PENCTSWIKFAELETIL 653
Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 85/173 (49%), Gaps = 15/173 (8%)
Query: 16 YEEELLRNPFSLKLWWRYL-VAKREAPFKKRFVIYERALKALPGSYKLWH----AYLIER 70
YEEE+ NP + W+ YL + + +A + +YERA+ +P + H YL
Sbjct: 480 YEEEVKANPHNYDAWFDYLRLVESDAEAEAVREVYERAIANVPPIQEKRHWKRYIYLWIN 539
Query: 71 LSIVKNLPITHPEYETLNNTFERAL-VTMHK---MPRIWIMYLETLTSQKFITKARRTFD 126
++ + L P E ++ +L + HK ++WI+Y + QK ++ ARR
Sbjct: 540 YALYEELEAKDP--ERTRQVYQASLELIPHKKFTFAKMWILYAQFEIRQKNLSLARRALG 597
Query: 127 RALCALPVTQHDRIWEIYLRFVEQEGIPIETSLRVYRRYLKYDPSHIEDFIEF 179
++ P ++++++Y+ +E + + ++Y ++L++ P + +I+F
Sbjct: 598 TSIGKCP---KNKLFKVYIE-LELQLREFDRCRKLYEKFLEFGPENCTSWIKF 646
Score = 37.7 bits (86), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 97/219 (44%), Gaps = 19/219 (8%)
Query: 83 EYETLNNTFERALVTMHKMPRIWIMYLETLTSQKFITKARRTFDRALCALPVTQHDRIWE 142
E + + +ERAL ++ +W+ Y E + + AR +DRA+ LP ++ W
Sbjct: 257 EIQRARSIYERALDVDYRNITLWLKYAEMEMKNRQVNHARNIWDRAITTLPRV--NQFWY 314
Query: 143 IYLRFVEQEGIPIETSLRVYRRYLKYDPSHI--EDFIEFLVKSKLWQEAAERLASVLNDD 200
Y E G + + +V+ R++++ P +I F ++ K +R ++ +
Sbjct: 315 KYTYMEEMLG-NVAGARQVFERWMEWQPEEQAWHSYINFELRYK----EVDRARTIY--E 367
Query: 201 QFYSIKGKTKHRLWLELCDLLTTHATEISGLNVDAIIRGGIRKFTDE--VGRLWTSLADY 258
+F + K+ W++ HA + + + F DE L+ + A +
Sbjct: 368 RFVLVHPDVKN--WIKYARFEEKHAY---FAHARKVYERAVEFFGDEHMDEHLYVAFAKF 422
Query: 259 YIRRELFEKARDIFEEGMMTVVTVRDFSVIFDSYSQFEE 297
++ FE+ R I++ + ++ +D +F +Y+ FE+
Sbjct: 423 EENQKEFERVRVIYKYA-LDRISKQDAQELFKNYTIFEK 460
Score = 33.5 bits (75), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 59/151 (39%), Gaps = 34/151 (22%)
Query: 424 TLWVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALEL 483
TLW+ +A++ + + +AR I+D+A+ T+ + W ++ ME N GA ++
Sbjct: 277 TLWLKYAEMEMKNRQVNHARNIWDRAI----TTLPRVNQFWYKYTYMEEMLGNVAGARQV 332
Query: 484 MRRATAEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILD 543
R M+ + W Y++ E ++ R +YER +
Sbjct: 333 FERW---------------------MEWQPEEQAWHSYINFELRYKEVDRARTIYERFV- 370
Query: 544 LRIATPQII--INYALLLEVWTLLHVFLLHV 572
+ P + I YA E H + H
Sbjct: 371 --LVHPDVKNWIKYARFEEK----HAYFAHA 395
>sp|Q6C186|CLF1_YARLI Pre-mRNA-splicing factor CLF1 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=CLF1 PE=3 SV=1
Length = 676
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 101/508 (19%), Positives = 194/508 (38%), Gaps = 124/508 (24%)
Query: 83 EYETLNNTFERALVTMHKMPRIWIMYLETLTSQKFITKARRTFDRALCALPVTQHDRIWE 142
E+ + FERAL WI Y++ +K I AR DRA+ LP D++W
Sbjct: 81 EFARARSVFERALEVNSTHVPTWIRYIQCELKEKNINHARNLLDRAVTLLPRV--DKLWF 138
Query: 143 IYLRFVEQEGIPIETSLRVYRRYLKYDPSHIEDFIEFLVKSKLWQEAAERLASVLNDDQF 202
Y+ E G I V+ R++ + P + + ++ K ++E +R +L ++
Sbjct: 139 TYVATEETLG-NIAGCRAVFERWMHWRPP-VTAWAAYVNMEKRYREF-DRARGILR--RY 193
Query: 203 YSI-KGKTKHRLWLELCDLLTTHAT--EISGLNVDAIIR---GGIRKFTDEVGRLWTSLA 256
++ G W + T E+ L +D ++ GG+ F DE L A
Sbjct: 194 VTVHPGAPAWNKWAKFEMEAGNRDTVREVYALGIDTLVEMAHGGV-DFLDES--LLAGWA 250
Query: 257 DYYIRRELFEKARDIFEEGMMTVVTVRDFSVIFDSYSQFEEIMVSAKMAKPDLSVEEEED 316
+ R +E+AR ++ G+ + + + ++ Y+ F
Sbjct: 251 SFETRHREYERARALYTYGLEKLPKSKS-AKLYADYTAF--------------------- 288
Query: 317 DEEHGSAEDEDIRLDVNLSMAEFVKKVLNGFWLHDVKDVDLRLARLEHLMNRRPELANSV 376
++++G+ E ++ V+ L RR + +
Sbjct: 289 EKQYGAKEG--------------IENVV--------------------LTKRRSKYEDQ- 313
Query: 377 LLRQNPHNVEQWHRRVKI-----FEGNPTKQILTYTEAVRTVDP-MKAVGKPHT-LWVAF 429
L+++P + + W + + E + ++I + AV V P K + + + LW+ +
Sbjct: 314 -LKEDPADYDTWFSYITLGQESGLEADQIREI--FERAVSNVPPHSKRLWRRYIFLWIKY 370
Query: 430 AKLYE-TYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMRRAT 488
A E K++ AR I+ + + A +W WA+ E+RH N A +++ R
Sbjct: 371 AIWEELENKEVEKAREIYKTCISIIPHKKFTFAKVWLLWAKFEIRHGNLPEARKILGRG- 429
Query: 489 AEPSVEVRRRVAADGNEPVQMKLHKSLRL-------------------------WTFYVD 523
+ G +P K + +L W Y +
Sbjct: 430 ----------LGMSGGKPALYKGYIALEAKLREFDRCRKLYDKYVEKFAEFAAPWMEYAE 479
Query: 524 LEESLGNLESTRAVYERILDLRIATPQI 551
LE+ LG+ E RA++E L ++ P++
Sbjct: 480 LEQMLGDEERARAIFE----LAVSQPEM 503
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 57/121 (47%), Gaps = 26/121 (21%)
Query: 426 WVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMR 485
W+ +A+ ++ A AR +F++A++VN V W + + EL+ KN A L+
Sbjct: 69 WMRYAQWELEQREFARARSVFERALEVNSTHV----PTWIRYIQCELKEKNINHARNLLD 124
Query: 486 RA-TAEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILDL 544
RA T P V+ +LW YV EE+LGN+ RAV+ER +
Sbjct: 125 RAVTLLPRVD---------------------KLWFTYVATEETLGNIAGCRAVFERWMHW 163
Query: 545 R 545
R
Sbjct: 164 R 164
Score = 37.4 bits (85), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 83/193 (43%), Gaps = 21/193 (10%)
Query: 16 YEEELLRNPFSLKLWWRYLVAKREAPFKKRFV--IYERALKALPG-SYKLWHAYLIERLS 72
YE++L +P W+ Y+ +E+ + + I+ERA+ +P S +LW Y+ +
Sbjct: 310 YEDQLKEDPADYDTWFSYITLGQESGLEADQIREIFERAVSNVPPHSKRLWRRYIFLWIK 369
Query: 73 IVKNLPITHPEYETLNNTFERAL-VTMHK---MPRIWIMYLETLTSQKFITKARRTFDRA 128
+ + E E ++ + + HK ++W+++ + + +AR+ R
Sbjct: 370 YAIWEELENKEVEKAREIYKTCISIIPHKKFTFAKVWLLWAKFEIRHGNLPEARKILGRG 429
Query: 129 LCALPVTQHDRIWEIYLRFVEQEGIPIETSLRVYRRYLKYDPSHIEDFIEFLVKSKLWQE 188
L +++ Y I +E LR + R K ++E F EF W E
Sbjct: 430 LGM--SGGKPALYKGY--------IALEAKLREFDRCRKLYDKYVEKFAEFAAP---WME 476
Query: 189 AAERLASVLNDDQ 201
AE L +L D++
Sbjct: 477 YAE-LEQMLGDEE 488
Score = 33.9 bits (76), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 30/137 (21%), Positives = 58/137 (42%), Gaps = 23/137 (16%)
Query: 420 GKPHTLWVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKG 479
GKP L+ + L ++ R ++DK V+ A+ W E+AE+E + +
Sbjct: 435 GKP-ALYKGYIALEAKLREFDRCRKLYDKYVE----KFAEFAAPWMEYAELEQMLGDEER 489
Query: 480 ALELMRRATAEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYE 539
A + A ++P +E+ V W +++ E N + RA+Y
Sbjct: 490 ARAIFELAVSQPEMEMPELV------------------WKRFIEFEAEEENYDRARAIYR 531
Query: 540 RILDLRIATPQIIINYA 556
++LD ++ I++A
Sbjct: 532 QLLDRTHGHIKVWISFA 548
>sp|Q54XP4|CRNL1_DICDI Crooked neck-like protein 1 OS=Dictyostelium discoideum GN=crnkl1
PE=3 SV=1
Length = 705
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 88/203 (43%), Gaps = 47/203 (23%)
Query: 389 HRRVKIFEGNPTKQILTYTEAVRTVDPMKA------VG---KPHTLWVAFAKLYETYKDI 439
H + P KQ++T E + K +G K +++ +A E+ KD+
Sbjct: 32 HENQQTLPKAPPKQVITDQEELEDYRLRKRQQYESLLGRNRKTAAIYIKYAAWEESQKDL 91
Query: 440 ANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMRRATAEPSVEVRRRV 499
AR +F++ + ++++ + ++W ++AEME+++KN A + RA
Sbjct: 92 TRARSVFERFLDIDHR----IPTVWIKYAEMEMKNKNINLARNIWDRAVC---------- 137
Query: 500 AADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILDLRIATPQ--------- 550
L + +LW Y +E+ LGN + RA++ER + + PQ
Sbjct: 138 ----------LLPRVSQLWFKYTFMEDMLGNYPAARAIFERWMQWK-PEPQAWNSYLKFE 186
Query: 551 ----IIINYALLLEVWTLLHVFL 569
+ N L+ E + L+H ++
Sbjct: 187 QRLKLFENTRLIFEKYILVHPYI 209
Score = 45.8 bits (107), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 85/198 (42%), Gaps = 34/198 (17%)
Query: 411 RTVDPMKAVGKPHTLWVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEM 470
R ++ + G L++AFAK E YK+I ARVI+ A +++ ++ +
Sbjct: 234 RAIEFLGEDGNDEQLFIAFAKFEEKYKEIERARVIYKYA--IDHVPKSRAKDLFDTFTNF 291
Query: 471 ELRHKNFKGALELMRRATAEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGN 530
E +H + R E V ++R + E ++ K K+ +W Y+ +EE G
Sbjct: 292 EKQHGD---------RIGIEDVVLGKKRFQYE--EEIK-KNSKNYDIWFDYLKMEEINGE 339
Query: 531 LESTRAVYERILDLRIATPQ---------IIINYALLLE-----------VWTLLHVFLL 570
+E TR +YER + T + + INYAL E V++ +
Sbjct: 340 IEKTREIYERSIGNLPPTNEKKHWKRYIYLWINYALFEELISKDMERARSVYSECIKLIP 399
Query: 571 HVPFTFSGLCMFTFFFTV 588
H F+FS + + F +
Sbjct: 400 HKEFSFSKIWILYANFEI 417
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 89 NTFERALVTMHKMPRIWIMYLETLTSQKFITKARRTFDRALCALPVTQHDRIWEIYLRFV 148
+ FER L H++P +WI Y E K I AR +DRA+C LP R+ +++ ++
Sbjct: 96 SVFERFLDIDHRIPTVWIKYAEMEMKNKNINLARNIWDRAVCLLP-----RVSQLWFKYT 150
Query: 149 EQEGI--PIETSLRVYRRYLKYDP 170
E + + ++ R++++ P
Sbjct: 151 FMEDMLGNYPAARAIFERWMQWKP 174
Score = 37.0 bits (84), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 71/175 (40%), Gaps = 31/175 (17%)
Query: 378 LRQNPHNVEQWHRRVKIFE--GNPTKQILTYTEAVRTVDPMKAVGKPH-----TLWVAFA 430
+++N N + W +K+ E G K Y ++ + P K H LW+ +A
Sbjct: 317 IKKNSKNYDIWFDYLKMEEINGEIEKTREIYERSIGNLPPTNE--KKHWKRYIYLWINYA 374
Query: 431 KLYE-TYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMRRATA 489
E KD+ AR ++ + +++ + IW +A E+R N A + +A
Sbjct: 375 LFEELISKDMERARSVYSECIKLIPHKEFSFSKIWILYANFEIRQLNLDKARLIYGQAI- 433
Query: 490 EPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILDL 544
G P +++ Y+ LE LGN + R +YE+ L++
Sbjct: 434 -------------GRNP-------KSKIFDQYIHLEIELGNFDRVRTLYEKYLEI 468
Score = 36.6 bits (83), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 78/171 (45%), Gaps = 11/171 (6%)
Query: 16 YEEELLRNPFSLKLWWRYLVAKR-EAPFKKRFVIYERALKALP--GSYKLWHAYLIERLS 72
YEEE+ +N + +W+ YL + +K IYER++ LP K W Y+ ++
Sbjct: 313 YEEEIKKNSKNYDIWFDYLKMEEINGEIEKTREIYERSIGNLPPTNEKKHWKRYIYLWIN 372
Query: 73 IVKNLPITHPEYETLNNTFERAL-VTMHK---MPRIWIMYLETLTSQKFITKARRTFDRA 128
+ + E + + + + HK +IWI+Y Q + KAR + +A
Sbjct: 373 YALFEELISKDMERARSVYSECIKLIPHKEFSFSKIWILYANFEIRQLNLDKARLIYGQA 432
Query: 129 LCALPVTQHDRIWEIYLRFVEQEGIPIETSLRVYRRYLKYDPSHIEDFIEF 179
+ P + +I++ Y+ +E E + +Y +YL+ P + + + +F
Sbjct: 433 IGRNPKS---KIFDQYIH-LEIELGNFDRVRTLYEKYLEIMPDNCDAWCKF 479
>sp|P87312|CLF1_SCHPO Pre-mRNA-splicing factor cwf4 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=cwf4 PE=1 SV=1
Length = 674
Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 103/219 (47%), Gaps = 11/219 (5%)
Query: 79 ITHPEYETLNNTFERALVTMHKMPRIWIMYLETLTSQKFITKARRTFDRALCALPVTQHD 138
+ E+ + FERAL +W+ Y+E + I AR FDRA+ LP D
Sbjct: 81 LDQKEFARARSVFERALDVDSTYIPLWLKYIECEMKNRNINHARNLFDRAVTQLPRV--D 138
Query: 139 RIWEIYLRFVEQEGIPIETSLRVYRRYLKYDPSHIEDFIEFLVKSKLWQEAAERLASVLN 198
++W Y+ E G I +V+ R+LK++P ++ ++ + + E ER +
Sbjct: 139 KLWYKYVYMEEMLG-NITGCRQVFERWLKWEPDE-NCWMSYIRMERRYHE-NERARGIY- 194
Query: 199 DDQFYSIKGKTKHRLWLELCDLLTTHATEISGLNVDAIIRGGIRKFTDEVGRLWTSLADY 258
++F + + + L + +A + + + AI G ++F +E R + + A +
Sbjct: 195 -ERFVVVHPEVTNWLRWARFEEECGNAANVRQVYLAAIDALG-QEFLNE--RFFIAFAKF 250
Query: 259 YIRRELFEKARDIFEEGMMTVVTVRDFSVIFDSYSQFEE 297
IR++ +E+AR IF+ + + + ++ Y+ FE+
Sbjct: 251 EIRQKEYERARTIFKYAIDFMPRSKSME-LYKEYTHFEK 288
Score = 46.2 bits (108), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 26/118 (22%)
Query: 426 WVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMR 485
W+ + + K+ A AR +F++A+ V+ + +W ++ E E++++N A L
Sbjct: 73 WMRYGQWELDQKEFARARSVFERALDVDSTYI----PLWLKYIECEMKNRNINHARNLFD 128
Query: 486 RATAE-PSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERIL 542
RA + P V+ +LW YV +EE LGN+ R V+ER L
Sbjct: 129 RAVTQLPRVD---------------------KLWYKYVYMEEMLGNITGCRQVFERWL 165
>sp|Q4WT84|CLF1_ASPFU Pre-mRNA-splicing factor clf1 OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=clf1 PE=3
SV=1
Length = 676
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 56/116 (48%), Gaps = 26/116 (22%)
Query: 426 WVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMR 485
W+ +A K+ AR IF++A+ VN +V +W + E E+R++N A L+
Sbjct: 75 WMRYASWELEQKEFRRARSIFERALDVNPTSV----VLWIRYIESEMRNRNINHARNLLD 130
Query: 486 RA-TAEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYER 540
RA T P V+ + W YV +EE+LGN++ TR V+ER
Sbjct: 131 RAVTILPRVD---------------------KFWYKYVYMEETLGNIQGTRQVFER 165
Score = 42.7 bits (99), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 79 ITHPEYETLNNTFERALVTMHKMPRIWIMYLETLTSQKFITKARRTFDRALCALPVTQHD 138
+ E+ + FERAL +WI Y+E+ + I AR DRA+ LP D
Sbjct: 83 LEQKEFRRARSIFERALDVNPTSVVLWIRYIESEMRNRNINHARNLLDRAVTILPRV--D 140
Query: 139 RIWEIYLRFVEQEGIPIETSLRVYRRYLKYDPS 171
+ W Y+ ++E+ I+ + +V+ R++ ++P
Sbjct: 141 KFWYKYV-YMEETLGNIQGTRQVFERWMSWEPD 172
Score = 42.0 bits (97), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 78/189 (41%), Gaps = 31/189 (16%)
Query: 378 LRQNPHNVEQWHRRVKIFE--GNPTKQILTYTEAVRTVDPMKAVGKPH-----TLWVAFA 430
L++NP N + W ++ E G+P + Y A+ + P + K H LW+ +A
Sbjct: 314 LKENPRNYDVWFDFARLEETSGDPDRVRDIYERAIAQIPPSQE--KRHWRRYIYLWIFYA 371
Query: 431 KLYET-YKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMRRATA 489
E KD+ AR I+ + +++ A IW A+ ++R + + A + + +A
Sbjct: 372 IWEEMEAKDVDRARQIYTECLKLIPHKKFTFAKIWLLKAQFDIRQMDLQAARKTLGQAIG 431
Query: 490 EPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILDLRIATP 549
+ +L+ Y+DLE L R +YE+ ++ A
Sbjct: 432 ---------------------MCPKDKLFRGYIDLERQLFEFVRCRTLYEKQIEWNPANS 470
Query: 550 QIIINYALL 558
Q I YA L
Sbjct: 471 QSWIKYAEL 479
Score = 41.2 bits (95), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 70/151 (46%), Gaps = 13/151 (8%)
Query: 16 YEEELLRNPFSLKLWWRYLVAKREAP-FKKRFVIYERALKALPGSYKLWHAYLIERLSIV 74
+E+ + RN ++ W RY + E F++ I+ERAL P S LW Y+ S +
Sbjct: 61 FEDYVRRNRLNMNNWMRYASWELEQKEFRRARSIFERALDVNPTSVVLWIRYI---ESEM 117
Query: 75 KNLPITHPEYETLNNTFERALVTMHKMPRIWIMYLETLTSQKFITKARRTFDRALCALPV 134
+N I H N +RA+ + ++ + W Y+ + I R+ F+R + P
Sbjct: 118 RNRNINH-----ARNLLDRAVTILPRVDKFWYKYVYMEETLGNIQGTRQVFERWMSWEP- 171
Query: 135 TQHDRIWEIYLRFVEQEGIPIETSLRVYRRY 165
+ W Y++ +E+ E + +++R+
Sbjct: 172 --DEGAWSAYIK-LEKRYNEFERARAIFQRF 199
>sp|Q4PB37|CLF1_USTMA Pre-mRNA-splicing factor CLF1 OS=Ustilago maydis (strain 521 / FGSC
9021) GN=CLF1 PE=3 SV=1
Length = 781
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 109/498 (21%), Positives = 197/498 (39%), Gaps = 97/498 (19%)
Query: 80 THPEYETLNNTFERAL-VTMHKMPRIWIMYLETLTSQKFITKARRTFDRALCALPVTQHD 138
+ E + + +ERAL V H +P +W+ Y E + + AR +DRA+ LP D
Sbjct: 82 SQGEMDRCRSIYERALDVEPHHLP-LWLRYTEQELKMRNVQHARNLYDRAVSILPRI--D 138
Query: 139 RIWEIYLRFVEQEGIPIETSLRVYRRYLKYDPSHI--EDFIEFLVK-------SKLWQEA 189
++W Y+ E G I + +V+ R++K++P +I V+ S +W
Sbjct: 139 QLWYKYVHLEELLG-NIPGTRQVFERWMKWEPEEKAWHAYINLEVRYDELDRASAIW--- 194
Query: 190 AERLASVLN-DDQFYSIKGKTKHRLWLELCDLLTTHATEISGLNVDAIIRGGIRKFTDEV 248
ER + Q+ + R LE ++ A + G + DA+ ++
Sbjct: 195 -ERCVTCHPVPKQWIRWAKFEEDRGNLEKARIVFQMALDYIGEDEDAM---------EKA 244
Query: 249 GRLWTSLADYYIRRELFEKARDIFEEGMMTVVTVRDFSVIFDSYSQFEE---IMVSAK-- 303
++T+ A R + +E+AR I++ + + + I+ SY++FE+ M S +
Sbjct: 245 QSVFTAFAKMETRLKEYERARVIYKYALERLPRSKS-EGIYSSYTRFEKQFGTMNSVEDT 303
Query: 304 -MAKPDLSVEEEEDDEEHGSA-EDEDIRLDVNLSMAEFVKKVLNGFWLHDVKDVDLRLAR 361
+ K + EEE +E G A D D D + + + +L D +
Sbjct: 304 VIGKRRIQYEEELAAQEAGGAPADYDTWFDYSRLEEDAYRALLATGGSQD---------Q 354
Query: 362 LEHLMNRRPELANSVLLRQNPHNVEQWHRRVKIFEGNPTKQILTYTEAVRTVDPMKAVGK 421
L+ + R E+ + Q P + E+ R IF
Sbjct: 355 LQQAVKRVREVYERAIA-QVPSSQEKRDWRRYIF-------------------------- 387
Query: 422 PHTLWVAFAKLYE-TYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGA 480
LW+ +A E +D R I+ A+ + A +W ++A E+R A
Sbjct: 388 ---LWLRYALFEEIDTRDYDRTREIYKAAIALVPHRRFTFAKLWVQYARFEVRRLELTAA 444
Query: 481 LELMRRATAEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYER 540
+++ AA G P L+L++ Y++LE SL + R +YE+
Sbjct: 445 RKIL--------------GAAIGMAP-------KLKLFSSYIELEVSLKEFDRARKIYEK 483
Query: 541 ILDLRIATPQIIINYALL 558
L+ Q + +A L
Sbjct: 484 ALEWDPTNSQTWVRFAEL 501
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 56/127 (44%), Gaps = 24/127 (18%)
Query: 414 DPMKAVGKPHTLWVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELR 473
D ++ G + W+ +A + ++ R I+++A+ V H +W + E EL+
Sbjct: 61 DRLRRNGLNMSTWIKYASWEASQGEMDRCRSIYERALDVE----PHHLPLWLRYTEQELK 116
Query: 474 HKNFKGALELMRRATAEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLES 533
+N + A L RA + L + +LW YV LEE LGN+
Sbjct: 117 MRNVQHARNLYDRAVS--------------------ILPRIDQLWYKYVHLEELLGNIPG 156
Query: 534 TRAVYER 540
TR V+ER
Sbjct: 157 TRQVFER 163
Score = 37.0 bits (84), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 59/145 (40%), Gaps = 35/145 (24%)
Query: 15 LYEEELLRNPFSLKLWWRYLVAKREAPFKKRFV-----IYERALKALPGSYKLWHAY--L 67
+YE L P L LW RY E K R V +Y+RA+ LP +LW+ Y L
Sbjct: 92 IYERALDVEPHHLPLWLRYT----EQELKMRNVQHARNLYDRAVSILPRIDQLWYKYVHL 147
Query: 68 IERLSIVK-----------------------NLPITHPEYETLNNTFERALVTMHKMPRI 104
E L + NL + + E + + +ER VT H +P+
Sbjct: 148 EELLGNIPGTRQVFERWMKWEPEEKAWHAYINLEVRYDELDRASAIWERC-VTCHPVPKQ 206
Query: 105 WIMYLETLTSQKFITKARRTFDRAL 129
WI + + + + KAR F AL
Sbjct: 207 WIRWAKFEEDRGNLEKARIVFQMAL 231
>sp|Q5AED6|CLF1_CANAL Pre-mRNA-splicing factor CLF1 OS=Candida albicans (strain SC5314 /
ATCC MYA-2876) GN=CLF1 PE=3 SV=2
Length = 758
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 51/119 (42%), Gaps = 25/119 (21%)
Query: 426 WVAFAKL-YETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELM 484
W +AK E D AR I ++A+ VN + V W ++ ++EL HKN A LM
Sbjct: 123 WTRYAKWEIENNHDFPRARSILERALDVNIQHV----PFWIQYIQLELSHKNINHARNLM 178
Query: 485 RRATAEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILD 543
RA L + +LW YV EE L N RAV+ER LD
Sbjct: 179 ERAIN--------------------TLPRVNKLWFLYVQTEEMLKNYPMVRAVFERWLD 217
Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 58/134 (43%), Gaps = 13/134 (9%)
Query: 16 YEEELLRNPFSLKLWWRYLVAKREA--PFKKRFVIYERALKALPGSYKLWHAYLIERLSI 73
+E+ + +N +L W RY + E F + I ERAL W Y+
Sbjct: 109 FEQHINKNRLNLGQWTRYAKWEIENNHDFPRARSILERALDVNIQHVPFWIQYI------ 162
Query: 74 VKNLPITHPEYETLNNTFERALVTMHKMPRIWIMYLETLTSQKFITKARRTFDRALCALP 133
L ++H N ERA+ T+ ++ ++W +Y++T K R F+R L P
Sbjct: 163 --QLELSHKNINHARNLMERAINTLPRVNKLWFLYVQTEEMLKNYPMVRAVFERWLDWHP 220
Query: 134 VTQHDRIWEIYLRF 147
T +W+ Y+ F
Sbjct: 221 DTS---VWDAYINF 231
Score = 38.9 bits (89), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 85/180 (47%), Gaps = 26/180 (14%)
Query: 378 LRQNPHNVEQWHRRVKIFEGNPTKQIL--TYTEAVRTV--DPMKAVG--KPHTLWVAFAK 431
++ +P++ + W + + + + + K L + + V D K++ + W+ +A
Sbjct: 379 IQNDPYDYDSWWKYMTLLQNSSNKSDLENAFKKVTGNVVHDKHKSIKWRRYIMFWIWYAF 438
Query: 432 LYE-TYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHK--NFKGALELMRRAT 488
E T + +AR I++ ++V A +W ++E ELR+ A +++ RA
Sbjct: 439 WEEMTNNNPDSAREIWNNCLKVIPHKSFTFAKVWIGYSEFELRNSEDGLAKARKILGRAI 498
Query: 489 AEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILDLRIAT 548
+ S+ N+P ++++ +Y+DLE+ LG+ R ++++ L++ + T
Sbjct: 499 GQTSI----------NKP-------KIKIFKYYIDLEKKLGDWNRVRLLFQKWLEVSLLT 541
Score = 35.0 bits (79), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 55/139 (39%), Gaps = 26/139 (18%)
Query: 16 YEEELLRNPFSLKLWWRYLVAKREAPFKKRFVIYERALKALPGS---------------- 59
YE+E+ +P+ WW+Y+ + + K E A K + G+
Sbjct: 375 YEQEIQNDPYDYDSWWKYMTLLQNSSNKSDL---ENAFKKVTGNVVHDKHKSIKWRRYIM 431
Query: 60 YKLWHAYLIERLSIVKNLPITHPEYETLNNTFERALVTMHKMPRIWIMY--LETLTSQKF 117
+ +W+A+ E + N P + E NN + ++WI Y E S+
Sbjct: 432 FWIWYAFWEE---MTNNNPDSAR--EIWNNCLKVIPHKSFTFAKVWIGYSEFELRNSEDG 486
Query: 118 ITKARRTFDRALCALPVTQ 136
+ KAR+ RA+ + +
Sbjct: 487 LAKARKILGRAIGQTSINK 505
>sp|Q5BDX1|CLF1_EMENI Pre-mRNA-splicing factor clf1 OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=clf1
PE=3 SV=2
Length = 673
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 106/496 (21%), Positives = 194/496 (39%), Gaps = 115/496 (23%)
Query: 79 ITHPEYETLNNTFERALVTMHKMPRIWIMYLETLTSQKFITKARRTFDRALCALPVTQHD 138
+ E+ + FERAL +WI Y+E+ + I AR DRA+ LP D
Sbjct: 83 LEQKEFRRARSIFERALDVDSTSVPLWIRYIESEMRNRNINHARNLLDRAVTILPRV--D 140
Query: 139 RIWEIYLRFVEQEGIPIETSLRVYRRYLKYDPSHIEDFIEFLVKSKLWQEAAERLASVLN 198
++W Y+ ++E+ I + +V+ R++ ++P E +K + ER ++
Sbjct: 141 KLWYKYV-YMEETLGNIPGTRQVFERWMSWEPD--EGAWSAYIKLEKRYNEFERARAIF- 196
Query: 199 DDQFYSIKGKTKHRLWLELCDLLTTHAT-----EISGLNVDAIIRGGIRKFTDEVGRLWT 253
Q ++I + R W++ + T E+ GL V+ + F DE +L+
Sbjct: 197 --QRFTI-VHPEPRNWIKWARFEEEYGTSDLVREVYGLAVETLGED----FMDE--KLFI 247
Query: 254 SLADYYIRRELFEKARDIFEEGMMTVVTVRDFSVIFDSYSQFE------EIMVSAKMAKP 307
+ A + + + +E+AR I++ + + + + + +Y+ FE E + + +AK
Sbjct: 248 AYARFETKLKEYERARAIYKYALDRLPRSKSIT-LHKAYTTFEKQFGDREGVENVILAKR 306
Query: 308 DLSVEEEEDDEEHGSAEDEDIRLDVNLSMAEFVKKVLNGFWLHDVKDVDLRLARLEHLMN 367
+ EE+ +K+ L + DV ARLE +
Sbjct: 307 RVQYEEQ-------------------------LKENLRNY------DVWFDFARLEE-QS 334
Query: 368 RRPELANSVLLR---QNPHNVEQWHRRVKIFEGNPTKQILTYTEAVRTVDPMKAVGKPHT 424
PE V R Q P + E+ H R I+
Sbjct: 335 GDPERVRDVYERAIAQIPPSQEKRHWRRYIY----------------------------- 365
Query: 425 LWVAFAKLYETY--KDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALE 482
LW+ +A L+E KDI AR ++ + +++ A +W A+ E+R N + A +
Sbjct: 366 LWIFYA-LWEEMEAKDIDRARQVYTECLKLIPHKKFTFAKVWLMKAQFEVRQLNLQAARK 424
Query: 483 LMRRATAEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERIL 542
+ +A + +L+ Y+DLE L R +YE+ +
Sbjct: 425 TLGQAIG---------------------MCPKDKLFRGYIDLERQLFEFVRCRTLYEKQI 463
Query: 543 DLRIATPQIIINYALL 558
+ + Q I YA L
Sbjct: 464 EWNPSNSQSWIQYAEL 479
Score = 49.7 bits (117), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 56/116 (48%), Gaps = 26/116 (22%)
Query: 426 WVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMR 485
W+ +A K+ AR IF++A+ V+ +V +W + E E+R++N A L+
Sbjct: 75 WMRYAAWELEQKEFRRARSIFERALDVDSTSV----PLWIRYIESEMRNRNINHARNLLD 130
Query: 486 RA-TAEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYER 540
RA T P V+ +LW YV +EE+LGN+ TR V+ER
Sbjct: 131 RAVTILPRVD---------------------KLWYKYVYMEETLGNIPGTRQVFER 165
Score = 39.3 bits (90), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 70/151 (46%), Gaps = 13/151 (8%)
Query: 16 YEEELLRNPFSLKLWWRYLVAKREAP-FKKRFVIYERALKALPGSYKLWHAYLIERLSIV 74
+E+ + RN ++ W RY + E F++ I+ERAL S LW Y+ S +
Sbjct: 61 FEDYVRRNRINMNNWMRYAAWELEQKEFRRARSIFERALDVDSTSVPLWIRYI---ESEM 117
Query: 75 KNLPITHPEYETLNNTFERALVTMHKMPRIWIMYLETLTSQKFITKARRTFDRALCALPV 134
+N I H N +RA+ + ++ ++W Y+ + I R+ F+R + P
Sbjct: 118 RNRNINH-----ARNLLDRAVTILPRVDKLWYKYVYMEETLGNIPGTRQVFERWMSWEP- 171
Query: 135 TQHDRIWEIYLRFVEQEGIPIETSLRVYRRY 165
+ W Y++ +E+ E + +++R+
Sbjct: 172 --DEGAWSAYIK-LEKRYNEFERARAIFQRF 199
>sp|Q527H0|CLF1_MAGO7 Pre-mRNA-splicing factor CLF1 OS=Magnaporthe oryzae (strain 70-15 /
ATCC MYA-4617 / FGSC 8958) GN=CLF1 PE=3 SV=1
Length = 691
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 86/194 (44%), Gaps = 27/194 (13%)
Query: 377 LLRQNPHNVEQW--HRRVKIFEGNPTKQILTYTEAVRTVDPMKAVGKPH-----TLWVAF 429
L+R+NP N + W + R++ G+ + Y +A+ V P +A K H LW+ F
Sbjct: 316 LVRENPKNYDVWFDYARLEEASGDIDRTREVYEKAIAQVPPTQA--KRHWRRYIYLWIFF 373
Query: 430 AKLYET-YKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMRRAT 488
A ET K+ AR ++D +++ A +W A E+R + A + + RA
Sbjct: 374 ALWEETEAKNPERARQVYDTCLKLIPHRTFTFAKVWMHKAHFEIRQGDLAAARKTLGRAI 433
Query: 489 A--------EPSVEVRRRVAADGNEPVQMKLH-----KSLRLWTFYVDLEESLGNLESTR 535
+ +E+ +++ G + + H + W + +LE L +L+ R
Sbjct: 434 GMCPKDRLFKGYIEMEQKLYEFGRCRILYEKHIAYNPANCSTWVKWAELERGLDDLDRAR 493
Query: 536 AVYERILDLRIATP 549
A ILD+ IA P
Sbjct: 494 A----ILDMGIAQP 503
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 57/126 (45%), Gaps = 27/126 (21%)
Query: 431 KLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMRRATAE 490
KLYE R++++K + N S W +WAE+E + A ++ A+
Sbjct: 451 KLYE----FGRCRILYEKHIAYNPANC----STWVKWAELERGLDDLDRARAILDMGIAQ 502
Query: 491 PSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILDLRIATPQ 550
P +++ V W Y+D EE G + TR++YER+LD + P+
Sbjct: 503 PVLDMPEVV------------------WKSYIDFEEEEGEYDKTRSLYERLLD-KADHPK 543
Query: 551 IIINYA 556
+ I+YA
Sbjct: 544 VWISYA 549
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 26/119 (21%)
Query: 426 WVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMR 485
W+ +A+ K+ A +R +F++A+ ++ V ++W + E EL+ +N A L+
Sbjct: 75 WLQYAQWELEQKEYARSRSVFERALNLHANKV----TLWIRYVEAELKSRNINFARNLLD 130
Query: 486 RA-TAEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILD 543
RA T P V+ +LW YV +EE LGN+ R V+ER ++
Sbjct: 131 RAVTHLPRVD---------------------KLWYKYVWVEEMLGNIPGVRQVFERWME 168
Score = 40.8 bits (94), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 79 ITHPEYETLNNTFERALVTMHKMPRIWIMYLETLTSQKFITKARRTFDRALCALPVTQHD 138
+ EY + FERAL +WI Y+E + I AR DRA+ LP D
Sbjct: 83 LEQKEYARSRSVFERALNLHANKVTLWIRYVEAELKSRNINFARNLLDRAVTHLPRV--D 140
Query: 139 RIWEIYLRFVEQEGIPIETSLRVYRRYLKYDPS 171
++W Y+ +VE+ I +V+ R++++ P
Sbjct: 141 KLWYKYV-WVEEMLGNIPGVRQVFERWMEWQPD 172
>sp|Q6BSP7|CLF1_DEBHA Pre-mRNA-splicing factor CLF1 OS=Debaryomyces hansenii (strain ATCC
36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=CLF1 PE=3 SV=2
Length = 714
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 55/119 (46%), Gaps = 27/119 (22%)
Query: 426 WVAFAKLYETYK-DIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELM 484
W+ +AK + D AR IF++A++VN V H+ W + + EL HKN A L+
Sbjct: 71 WLRYAKWEVKHNHDFPRARSIFERALEVN---VQHIP-FWTHYIQFELSHKNITHARNLL 126
Query: 485 RRA-TAEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERIL 542
RA T P V+ +LW YV EE+L N + R ++ER L
Sbjct: 127 DRAVTTLPRVD---------------------KLWFLYVQTEETLKNYQMVRIIFERWL 164
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 94/226 (41%), Gaps = 42/226 (18%)
Query: 16 YEEELLRNPFSLKLWWRYLV--AKREAPFKKRFVIYERALKALPGSYKLWHAYLIERLSI 73
YE++L +N + W RY K F + I+ERAL+ W Y+ LS
Sbjct: 57 YEQQLNKNRLNFGQWLRYAKWEVKHNHDFPRARSIFERALEVNVQHIPFWTHYIQFELS- 115
Query: 74 VKNLPITHPEYETLNNTFERALVTMHKMPRIWIMYLETLTSQKFITKARRTFDRALCALP 133
+ ITH N +RA+ T+ ++ ++W +Y++T + K R F+R L P
Sbjct: 116 --HKNITHAR-----NLLDRAVTTLPRVDKLWFLYVQTEETLKNYQMVRIIFERWLSWNP 168
Query: 134 --------------VTQHDRIWEIYLRFVEQEGIPIETSLRVYRRYLKY-------DPSH 172
++D EIY+R+V+ I +S ++ +++ + DP
Sbjct: 169 NPSAWDAYINYEKRYDEYDNAREIYIRYVQ-----IHSSGEIWLKWIDFEMNDVPIDPEQ 223
Query: 173 ---IEDFIEFLVKSKLWQEAAE---RLASVLNDDQFYSIKGKTKHR 212
I + E V S L EA LA ++N + I K R
Sbjct: 224 VKRIRNVFELSVDSMLASEALRGDISLAEIINKWSLWEISVKEYER 269
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 83/179 (46%), Gaps = 27/179 (15%)
Query: 378 LRQNPHNVEQWHRRVKIFEGNPTKQIL--TYTEAVRTV--DPMKAV--GKPHTLWVAFAK 431
+ ++P + + W + I + ++ T+ A++ + D K+ + +WV +A
Sbjct: 328 VNKSPSDYDSWWSYISILQQEDNNEVTRETFERAIKVIPTDAFKSTVWRRYIYIWVKYAF 387
Query: 432 LYE-TYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKG---ALELMRRA 487
E T I N R I++KA++V A IW +A+ E+R+ G A +++ R+
Sbjct: 388 WEEFTMGSIENGRNIWNKALKVIPHKRFTFAKIWISFAQFEIRNDPENGLASARKILGRS 447
Query: 488 TAEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILDLRI 546
+ S +R +L+ FY++LE+ LG + R +YE+ L+L +
Sbjct: 448 IGQSSTVKPKR-----------------KLFKFYIELEQKLGEWDRVRKLYEKWLELSL 489
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 111/251 (44%), Gaps = 42/251 (16%)
Query: 91 FERAL-VTMHKMPRIWIMYLETLTSQKFITKARRTFDRALCALPVTQHDRIWEIYLRFVE 149
FERAL V + +P W Y++ S K IT AR DRA+ LP D++W +Y++
Sbjct: 92 FERALEVNVQHIP-FWTHYIQFELSHKNITHARNLLDRAVTTLPRV--DKLWFLYVQ--T 146
Query: 150 QEGIPIETSLR-VYRRYLKY--DPSHIEDFIEFLVKSKLWQEAAERLASVLNDDQFY--S 204
+E + +R ++ R+L + +PS + +I + +R N + Y
Sbjct: 147 EETLKNYQMVRIIFERWLSWNPNPSAWDAYINY----------EKRYDEYDNAREIYIRY 196
Query: 205 IKGKTKHRLWLELCDLLTTHAT----------EISGLNVDAIIRGGIRKFTDEVGRLWTS 254
++ + +WL+ D + L+VD+++ + + +
Sbjct: 197 VQIHSSGEIWLKWIDFEMNDVPIDPEQVKRIRNVFELSVDSMLASEALRGDISLAEIINK 256
Query: 255 LADYYIRRELFEKARDIFE-----EGMMTVVTVRDFSVIFDSYSQFE------EIMVSAK 303
+ + I + +E+AR IF+ + + ++T + I+ SY++FE + + S+
Sbjct: 257 WSLWEISVKEYERARAIFQLMLKSDTIQEIITPEQRNQIYSSYTEFEKSYGDKDTIESSI 316
Query: 304 MAKPDLSVEEE 314
M K L EEE
Sbjct: 317 MIKRKLKYEEE 327
>sp|Q6CJK2|CLF1_KLULA Pre-mRNA-splicing factor CLF1 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=CLF1 PE=3 SV=1
Length = 684
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 56/116 (48%), Gaps = 26/116 (22%)
Query: 426 WVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMR 485
W+ +A+ KDI AR I+++A+ V++ + +W ++ + E++ KN A L+
Sbjct: 66 WMRYAQFEFDQKDIRRARSIYERALLVDHGFI----PLWIQYIDSEIKWKNINHARNLLD 121
Query: 486 RAT-AEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYER 540
RAT A P V+ +LW Y+ LEESLGN R +Y R
Sbjct: 122 RATNALPRVD---------------------KLWFKYLLLEESLGNQGIVRGIYTR 156
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 7/92 (7%)
Query: 91 FERALVTMHKMPRIWIMYLETLTSQKFITKARRTFDRALCALPVTQHDRIWEIYLRFVEQ 150
+ERAL+ H +WI Y+++ K I AR DRA ALP D++W YL +
Sbjct: 86 YERALLVDHGFIPLWIQYIDSEIKWKNINHARNLLDRATNALPRV--DKLWFKYLLL--E 141
Query: 151 EGIPIETSLR-VYRRYLKYDPS--HIEDFIEF 179
E + + +R +Y R+ ++P + FIEF
Sbjct: 142 ESLGNQGIVRGIYTRWCSFEPGPDAWDSFIEF 173
Score = 36.2 bits (82), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 80/172 (46%), Gaps = 12/172 (6%)
Query: 16 YEEELLRNPFSLKLWWRYLVAKREAPFKKRFVIYERALK-ALPGSY---KLWHAYLIERL 71
YE+ L +P+ WW Y+ E ++ ++ ++ A P S W Y+ +
Sbjct: 304 YEQYLKSDPYHYSTWWVYIDLVEEKYQEQLTSAFQSFIELAKPKSLVKDSSWKRYIRICV 363
Query: 72 SIVKNLPITHPEYETLNNTFERAL-VTMHK---MPRIWIMYLETLTSQKFITKARRTFDR 127
+ L +T + T+ + ++ L + HK ++WIMY E Q + KAR+
Sbjct: 364 RYLVYLELTINDLPTIRSVYQDILDIIPHKKFTFGKLWIMYAEFEIRQNNLLKARKILGV 423
Query: 128 ALCALPVTQHDRIWEIYLRFVEQEGIPIETSLRVYRRYLKYDPSHIEDFIEF 179
+L P ++++ Y+ +E + ++Y +Y+ ++PS ++ ++++
Sbjct: 424 SLGKSP---KPKVFKYYIN-LEIRLKEFDRVRKLYEKYIDFNPSSVQSWLDY 471
Score = 35.0 bits (79), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 19/159 (11%)
Query: 16 YEEELLRNPFSLKLWWRYLVAK-REAPFKKRFVIYERALKALPGSYKLWHAYLIERLSIV 74
YE L RN L+ W RY + + ++ IYERAL G LW Y+ S +
Sbjct: 52 YETVLKRNRLDLRQWMRYAQFEFDQKDIRRARSIYERALLVDHGFIPLWIQYID---SEI 108
Query: 75 KNLPITHPEYETLNNTFERALVTMHKMPRIWIMYL---ETLTSQKFITKARRTFDRALCA 131
K I H N +RA + ++ ++W YL E+L +Q + R + R
Sbjct: 109 KWKNINHA-----RNLLDRATNALPRVDKLWFKYLLLEESLGNQGIV---RGIYTRWCSF 160
Query: 132 LPVTQHDRIWEIYLRFVEQEGIPIETSLRVYRRYLKYDP 170
P W+ ++ F E + E +Y +++ P
Sbjct: 161 EPGPD---AWDSFIEF-ETRCLNFENVRNIYSKFVLVHP 195
>sp|Q9HF03|CLF1_CRYNH Pre-mRNA-splicing factor CLF1 OS=Cryptococcus neoformans var.
grubii serotype A (strain H99 / ATCC 208821 / CBS 10515
/ FGSC 9487) GN=CLF1 PE=3 SV=1
Length = 724
Score = 45.8 bits (107), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 80 THPEYETLNNTFERALVTMHKMPRIWIMYLETLTSQKFITKARRTFDRALCALPVTQHDR 139
+ EYE + FERAL + +WI Y + + I AR FDRA+ LP D
Sbjct: 87 SQNEYERSRSVFERALDVDPRSVDLWIKYTDMELKARNINHARNLFDRAITLLPRV--DA 144
Query: 140 IWEIYLRFVEQEGIPIETSLRVYRRYLKYDPS 171
+W Y+ ++E+ + + + +++ R+++++P+
Sbjct: 145 LWYKYV-YLEELLLNVSGARQIFERWMQWEPN 175
Score = 42.0 bits (97), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 61/133 (45%), Gaps = 17/133 (12%)
Query: 426 WVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMR 485
W +A+ + + +R +F++A+ V+ ++VD +W ++ +MEL+ +N A L
Sbjct: 78 WTKYAQWEASQNEYERSRSVFERALDVDPRSVD----LWIKYTDMELKARNINHARNLFD 133
Query: 486 RA-TAEPSVEV---------RRRVAADGNEPV---QMKLHKSLRLWTFYVDLEESLGNLE 532
RA T P V+ + G + M+ + + W Y+ LEE L+
Sbjct: 134 RAITLLPRVDALWYKYVYLEELLLNVSGARQIFERWMQWEPNDKAWQSYIKLEERYNELD 193
Query: 533 STRAVYERILDLR 545
A+YER + R
Sbjct: 194 RASAIYERWIACR 206
Score = 40.0 bits (92), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 74/177 (41%), Gaps = 30/177 (16%)
Query: 411 RTVDPMKAVGK--PHT------LWVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLAS 462
R D KA K PH LW+A+A D++ AR + + + K
Sbjct: 400 RARDVYKAAVKLVPHKTFTFAKLWLAYAYFEIRRLDVSAARKVLGAGIGMCPKP-----K 454
Query: 463 IWCEWAEMELRHKNFKGALELMRR---------------ATAEPSVEVRRRVAADGNEPV 507
++ + E+E+R + F L + E +VE RV A V
Sbjct: 455 LFTGYIELEMRLREFDRVRTLYEKFLTYDPSLSSAWIQWTQVESAVEDFERVRAIFELAV 514
Query: 508 QMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILDLRIATPQIIINYALLLEVWTL 564
Q L +W Y+D E G E R +YER+L+ R + ++ I+YA L+E+ TL
Sbjct: 515 QQSLDMPEIVWKAYIDFEAGEGERERARNLYERLLE-RTSHVKVWISYA-LMEIATL 569
Score = 38.5 bits (88), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 64/131 (48%), Gaps = 16/131 (12%)
Query: 42 FKKRFVIYERALKALPGSYKLWHAYLIERLSIVKNLPITHPEYETLNNTFERALVTMHKM 101
+++ ++ERAL P S LW Y L K I H N F+RA+ + ++
Sbjct: 91 YERSRSVFERALDVDPRSVDLWIKYTDMEL---KARNINH-----ARNLFDRAITLLPRV 142
Query: 102 PRIW--IMYLETLTSQKFITKARRTFDRALCALPVTQHDRIWEIYLRFVEQEGIPIETSL 159
+W +YLE L ++ AR+ F+R + P +D+ W+ Y++ +E+ ++ +
Sbjct: 143 DALWYKYVYLEELLLN--VSGARQIFERWMQWEP---NDKAWQSYIK-LEERYNELDRAS 196
Query: 160 RVYRRYLKYDP 170
+Y R++ P
Sbjct: 197 AIYERWIACRP 207
Score = 32.3 bits (72), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 62/155 (40%), Gaps = 14/155 (9%)
Query: 28 KLWWRYL-VAKREAPFKKRFVIYER--ALKALPGSYKLWHAYLIERLSIVKNLPITHPEY 84
K W Y+ + +R + IYER A + +P ++ W + +R K +
Sbjct: 177 KAWQSYIKLEERYNELDRASAIYERWIACRPIPKNWVAWAKFEEDRGQPDKAREVFQTAL 236
Query: 85 ETLNNTFERALVTMHKMPRIWIMYLETLTSQKFITKARRTFDRALCALPVTQHDRIWEIY 144
E + E+ + K ++ + T K +AR + AL LP ++ ++ Y
Sbjct: 237 EFFGDEEEQ----VEKAQSVFAAFARMETRLKEFERARVIYKFALARLPRSKSASLYAQY 292
Query: 145 LRFVEQEGIPIETSLRV-------YRRYLKYDPSH 172
+F +Q G L V Y L YDP++
Sbjct: 293 TKFEKQHGDRAGVELTVLGKRRIQYEEELAYDPTN 327
>sp|Q7SGD2|CLF1_NEUCR Pre-mRNA-splicing factor clf-1 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=clf-1 PE=3 SV=1
Length = 695
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 83/195 (42%), Gaps = 22/195 (11%)
Query: 16 YEEELLRNPFSLKLWWRYLVAKREAP-FKKRFVIYERALKALPGSYKLWHAYLIERLSIV 74
+E+ + RN L W +Y + E F + ++ERAL P + +LW Y+ + +
Sbjct: 61 FEDYVRRNRVRLSNWLQYAQWELEQKEFARARSVFERALDVHPNNTQLWIRYV---QAEI 117
Query: 75 KNLPITHPEYETLNNTFERALVTMHKMPRIWIMYLETLTSQKFITKARRTFDRALCALPV 134
KN I H N +RA+ + ++ +W YL + I R+ FDR + P
Sbjct: 118 KNRNINHA-----RNLLDRAVTRLPRVTSLWYQYLYVMEMLGDIPGTRQVFDRWMKWQPD 172
Query: 135 TQHDRIWEIYLRFVEQEGIPIETSLRVYRRYLKYDP---------SHIEDFIEFLVKSKL 185
Q W Y+R ++ G + + ++R + P E++ ++
Sbjct: 173 EQ---AWSAYIRLEKRYG-EFDRAREIFRAFTAVHPEPRTWLKWAKFEEEYGTSDTVREV 228
Query: 186 WQEAAERLASVLNDD 200
+Q A + +A L DD
Sbjct: 229 FQTAIQTIAETLGDD 243
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 101/226 (44%), Gaps = 21/226 (9%)
Query: 79 ITHPEYETLNNTFERALVTMHKMPRIWIMYLETLTSQKFITKARRTFDRALCALP-VTQH 137
+ E+ + FERAL ++WI Y++ + I AR DRA+ LP VT
Sbjct: 83 LEQKEFARARSVFERALDVHPNNTQLWIRYVQAEIKNRNINHARNLLDRAVTRLPRVTS- 141
Query: 138 DRIWEIYLRFVEQEGIPIETSLRVYRRYLKYDPSHIEDFIEFLVKSKLWQEAAERLASVL 197
+W YL +E G I + +V+ R++K+ P + + ++ K + E +R +
Sbjct: 142 --LWYQYLYVMEMLG-DIPGTRQVFDRWMKWQPDE-QAWSAYIRLEKRYGE-FDRAREIF 196
Query: 198 NDDQFYSIKGKTKHRLWLELCDLLTTHATEISGLNVDAIIRGGIRKFTDEVG------RL 251
F ++ + R WL+ + T + V + + I+ + +G R+
Sbjct: 197 R--AFTAVHPEP--RTWLKWAKFEEEYGTSDT---VREVFQTAIQTIAETLGDDAVDERI 249
Query: 252 WTSLADYYIRRELFEKARDIFEEGMMTVVTVRDFSVIFDSYSQFEE 297
+ + A Y R +E+AR I++ G+ + + + + Y+ FE+
Sbjct: 250 FIAFARYEARLREYERARAIYKFGLDNLPRSKSMT-LHAHYTTFEK 294
Score = 39.7 bits (91), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 52/115 (45%), Gaps = 24/115 (20%)
Query: 426 WVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMR 485
W+ +A+ K+ A AR +F++A+ V+ +W + + E++++N A L+
Sbjct: 75 WLQYAQWELEQKEFARARSVFERALDVHPNNT----QLWIRYVQAEIKNRNINHARNLLD 130
Query: 486 RATAEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYER 540
RA +L + LW Y+ + E LG++ TR V++R
Sbjct: 131 RAVT--------------------RLPRVTSLWYQYLYVMEMLGDIPGTRQVFDR 165
Score = 38.9 bits (89), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 78/175 (44%), Gaps = 17/175 (9%)
Query: 15 LYEEELLRNPFSLKLWWRYL-VAKREAPFKKRFVIYERALKALPGSYKLWH--------- 64
LYEE++ N + +W+ + + + + +YERA+ +P + + H
Sbjct: 313 LYEEQVKENAKNYDVWFDFARLEESGGDVDRTREVYERAIAQVPPTQEKRHWRRYIFLFL 372
Query: 65 AYLIERLSIVKNLPITHPEYETLNNTFERALVTMHKMPRIWIMYLETLTSQKFITKARRT 124
Y I K++ Y+T N T K +W+ Q +T AR+T
Sbjct: 373 FYAIWEERETKDIGRARQIYDTCLNLIPHKKFTFAK---VWVAKAHFEIRQGQLTTARKT 429
Query: 125 FDRALCALPVTQHDRIWEIYLRFVEQEGIPIETSLRVYRRYLKYDPSHIEDFIEF 179
RA+ P D+I++ Y+ +EQ+ E +Y +++ Y+P++ + +I++
Sbjct: 430 LGRAIGMCP---KDKIFKEYI-LLEQKLYEFERCRTLYEKHVMYNPANCQTWIKW 480
Score = 33.5 bits (75), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 60/127 (47%), Gaps = 29/127 (22%)
Query: 431 KLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMR-RATA 489
KLYE R +++K V N W +WAE+E +G +L R RA
Sbjct: 452 KLYE----FERCRTLYEKHVMYNPANC----QTWIKWAELE------RGLDDLERTRAIF 497
Query: 490 EPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILDLRIATP 549
E +V ++P+ L +W Y+D EE G E TRA+YER+L+ + P
Sbjct: 498 ELAV----------SQPI---LDMPEVVWKAYIDFEEEEGEYERTRALYERLLE-KADHP 543
Query: 550 QIIINYA 556
++ I+YA
Sbjct: 544 KVWISYA 550
>sp|Q5K654|CLF1_PARBR Pre-mRNA-splicing factor CLF1 OS=Paracoccidioides brasiliensis
GN=CLF1 PE=3 SV=1
Length = 677
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 24/115 (20%)
Query: 426 WVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMR 485
W+ +A+ K+ AR +F++A+ V+ V +W + E E++ +N A L+
Sbjct: 75 WMRYAQWELEQKEFRRARSVFERALDVDPTAV----VLWIRYIEAEMKTRNINHARNLLD 130
Query: 486 RATAEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYER 540
RA V + RV +LW YV +EE LGN+ TR V+ER
Sbjct: 131 RA-----VTIYSRVD---------------KLWYKYVYMEEMLGNIPGTRQVFER 165
Score = 43.1 bits (100), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 99/494 (20%), Positives = 195/494 (39%), Gaps = 111/494 (22%)
Query: 79 ITHPEYETLNNTFERALVTMHKMPRIWIMYLETLTSQKFITKARRTFDRALCALPVTQHD 138
+ E+ + FERAL +WI Y+E + I AR DRA+ ++ D
Sbjct: 83 LEQKEFRRARSVFERALDVDPTAVVLWIRYIEAEMKTRNINHARNLLDRAVTIY--SRVD 140
Query: 139 RIWEIYLRFVEQEGIPIETSLRVYRRYLKYDPSHIEDFIEFLVKSKLWQEAAERLASVLN 198
++W Y+ E G I + +V+ R++ ++P + ++ K + E +R+ ++
Sbjct: 141 KLWYKYVYMEEMLG-NIPGTRQVFERWMSWEPDEGA-WGAYIKLEKRYNE-FDRVRAIF- 196
Query: 199 DDQFYSIKGKTKHRLWLELCDLLTTHAT-----EISGLNVDAIIRGGIRKFTDEVGRLWT 253
++F + + K+ W++ + T E+ GL ++ + F DE +L+
Sbjct: 197 -ERFTVVHPEPKN--WIKWARFEEEYGTSDMVREVYGLAIETLGED----FMDE--KLFI 247
Query: 254 SLADYYIRRELFEKARDIFEEGMMTVVTVRDFSVIFDSYSQFEEIMVSAKMAKPDLSVEE 313
+ A Y + + FE+AR I++ + + + + + +Y+ FE
Sbjct: 248 AYARYEAKLKEFERARAIYKYALDRLPRAKSVA-LHKAYTTFE----------------- 289
Query: 314 EEDDEEHGSAEDEDIRLDVNLSMAEFVKKVLNGFWLHDVKDVDLRLARLEHLMNRRPELA 373
++ G E V+DV L R+++
Sbjct: 290 ----KQFGDRE--------------------------GVEDVILSKRRVQY--------- 310
Query: 374 NSVLLRQNPHNVEQWHRRVKIFE--GNPTKQILTYTEAVRTVDPMKAVGKPH-----TLW 426
+++NP N + W V++ E G+ + Y A+ + P + K H LW
Sbjct: 311 -EEQIKENPKNYDIWFDFVRLEESSGDVERVRDVYERAIAQMPPSQE--KRHWRRYIYLW 367
Query: 427 VAFAKLYETY--KDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELM 484
+ +A L+E KD+ A I+ + +++ A IW A+ E+R + + A + +
Sbjct: 368 IFYA-LWEELEAKDMERAHQIYQECIRLIPHKKFTFAKIWLMKAQFEIRQMDLQAARKTL 426
Query: 485 RRATAEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILDL 544
A G P +L+ Y+DLE L R ++E+ ++
Sbjct: 427 GHAI--------------GACPKD-------KLFKGYIDLERQLFEFVRCRKLFEKQIEW 465
Query: 545 RIATPQIIINYALL 558
+ Q I +A L
Sbjct: 466 SPSNCQAWIKFAEL 479
Score = 38.9 bits (89), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 83/180 (46%), Gaps = 17/180 (9%)
Query: 10 SEDDLLYEEELLRNPFSLKLWWRYLVAKREAPFKKRFV-IYERALKALPGSYK------- 61
S+ + YEE++ NP + +W+ ++ + + +R +YERA+ +P S +
Sbjct: 304 SKRRVQYEEQIKENPKNYDIWFDFVRLEESSGDVERVRDVYERAIAQMPPSQEKRHWRRY 363
Query: 62 --LWHAYLIERLSIVKNLPITHPEYETLNNTFERALVTMHKMPRIWIMYLETLTSQKFIT 119
LW Y + K++ H Y+ T K IW+M + Q +
Sbjct: 364 IYLWIFYALWEELEAKDMERAHQIYQECIRLIPHKKFTFAK---IWLMKAQFEIRQMDLQ 420
Query: 120 KARRTFDRALCALPVTQHDRIWEIYLRFVEQEGIPIETSLRVYRRYLKYDPSHIEDFIEF 179
AR+T A+ A P D++++ Y+ +E++ +++ + +++ PS+ + +I+F
Sbjct: 421 AARKTLGHAIGACP---KDKLFKGYID-LERQLFEFVRCRKLFEKQIEWSPSNCQAWIKF 476
Score = 35.4 bits (80), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 517 LWTFYVDLEESLGNLESTRAVYERILDLRIATPQIIINYA 556
LW Y+D EE G + TRA+YER+L+ + ++ IN+A
Sbjct: 508 LWKSYIDFEEYEGEYDRTRALYERLLE-KTNHVKVWINFA 546
Score = 35.4 bits (80), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 53/119 (44%), Gaps = 9/119 (7%)
Query: 16 YEEELLRNPFSLKLWWRYLVAKREAP-FKKRFVIYERALKALPGSYKLWHAYLIERLSIV 74
+E+ + RN S+ W RY + E F++ ++ERAL P + LW Y+ + +
Sbjct: 61 FEDYVRRNRISMNNWMRYAQWELEQKEFRRARSVFERALDVDPTAVVLWIRYI---EAEM 117
Query: 75 KNLPITHPEYETLNNTFERALVTMHKMPRIWIMYLETLTSQKFITKARRTFDRALCALP 133
K I H N +RA+ ++ ++W Y+ I R+ F+R + P
Sbjct: 118 KTRNINH-----ARNLLDRAVTIYSRVDKLWYKYVYMEEMLGNIPGTRQVFERWMSWEP 171
Score = 34.7 bits (78), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 76/190 (40%), Gaps = 39/190 (20%)
Query: 358 RLARLEHLMN----RRPELANSVLLRQNPHNVEQWHRRVKI-FEGNPTKQILTYTEAVRT 412
R A LE L +R E + V R+N ++ W R + E ++ + E
Sbjct: 43 RFADLEELHEYQGRKRKEFEDYV--RRNRISMNNWMRYAQWELEQKEFRRARSVFERALD 100
Query: 413 VDPMKAVGKPHTLWVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMEL 472
VDP V LW+ + + ++I +AR + D+AV + Y VD L W ++ ME
Sbjct: 101 VDPTAVV-----LWIRYIEAEMKTRNINHARNLLDRAVTI-YSRVDKL---WYKYVYMEE 151
Query: 473 RHKNFKGALELMRRATA-EPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNL 531
N G ++ R + EP +G W Y+ LE+
Sbjct: 152 MLGNIPGTRQVFERWMSWEPD---------EG-------------AWGAYIKLEKRYNEF 189
Query: 532 ESTRAVYERI 541
+ RA++ER
Sbjct: 190 DRVRAIFERF 199
>sp|Q750X3|CLF1_ASHGO Pre-mRNA-splicing factor CLF1 OS=Ashbya gossypii (strain ATCC 10895
/ CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=CLF1 PE=3
SV=1
Length = 683
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 55/124 (44%), Gaps = 26/124 (20%)
Query: 426 WVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMR 485
W+ +A +D+ AR +F++A+ V V +W + + ELR ++ A L+
Sbjct: 63 WLRYAAFEYEQRDMRRARSVFERALAVAPGDV----VVWLRYVDCELRARDVNHARNLLV 118
Query: 486 RATAE-PSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILDL 544
RATA P V+ +LW YV +EESLG +E R VY + L
Sbjct: 119 RATALLPRVD---------------------KLWYKYVLMEESLGQVELVRGVYTKWCTL 157
Query: 545 RIAT 548
A
Sbjct: 158 EPAA 161
Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 82/175 (46%), Gaps = 17/175 (9%)
Query: 16 YEEELLRNPFSLKLWWRYLVAKREA-PFKKRFVIYERALKALPGSYK----------LWH 64
YEE+LL +P WW YL E+ P + R + E +KA+P S + LW
Sbjct: 300 YEEQLLAHPLDYDAWWLYLDLLEESFPAELRAALAEATVKAVPRSQEKDMQWRKYVNLWL 359
Query: 65 AYLIERLSIVKNLPITHPEYETLNNTFERALVTMHKMPRIWIMYLETLTSQKFITKARRT 124
YL+ +++ + +T Y+ L E T + WIMY E Q+ + KAR+
Sbjct: 360 RYLLFLETVLVDSDLTRSMYQKL--VREVIPNTKFTFAKAWIMYAEFEIRQEKLDKARKI 417
Query: 125 FDRALCALPVTQHDRIWEIYLRFVEQEGIPIETSLRVYRRYLKYDPSHIEDFIEF 179
+L P ++++ Y+ +E + + R++ + L++ P + ++IE+
Sbjct: 418 LGMSLGMCP---KPKLFQYYID-LEIKLKEFDRVRRLHEKLLEFQPDVLSNWIEY 468
Score = 39.3 bits (90), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 64/156 (41%), Gaps = 13/156 (8%)
Query: 16 YEEELLRNPFSLKLWWRYLVAKREA-PFKKRFVIYERALKALPGSYKLWHAYLIERLSIV 74
+EE L RN ++ W RY + E ++ ++ERAL PG +W Y+ L
Sbjct: 49 FEEALKRNRLDVRQWLRYAAFEYEQRDMRRARSVFERALAVAPGDVVVWLRYVDCEL--- 105
Query: 75 KNLPITHPEYETLNNTFERALVTMHKMPRIWIMYLETLTSQKFITKARRTFDRALCALPV 134
+ + H N RA + ++ ++W Y+ S + R + + P
Sbjct: 106 RARDVNHA-----RNLLVRATALLPRVDKLWYKYVLMEESLGQVELVRGVYTKWCTLEPA 160
Query: 135 TQHDRIWEIYLRFVEQEGIPIETSLRVYRRYLKYDP 170
W+ ++ F ++G +E VY RY+ P
Sbjct: 161 AA---AWDAFVDFETRQG-QVEHVREVYSRYVMVHP 192
>sp|Q8K2Z2|PRP39_MOUSE Pre-mRNA-processing factor 39 OS=Mus musculus GN=Prpf39 PE=2 SV=3
Length = 665
Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 58/144 (40%), Gaps = 27/144 (18%)
Query: 424 TLWVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALEL 483
T WV + E + AR FDK V+Y + W ++A++E RH N K + E+
Sbjct: 94 TGWVYLLQYVEQENHLMAARKAFDKFF-VHYP---YCYGYWKKYADLEKRHDNIKQSDEV 149
Query: 484 MRRATAEPSVEVR---------RRVAADGNEPVQMKLH--------------KSLRLWTF 520
RR + V + G++ + +S +LW
Sbjct: 150 YRRGLQAIPLSVDLWIHYINFLKETLEPGDQETNTTIRGTFEHAVLAAGTDFRSDKLWEM 209
Query: 521 YVDLEESLGNLESTRAVYERILDL 544
Y++ E GNL AVY+RIL +
Sbjct: 210 YINWENEQGNLREVTAVYDRILGI 233
Score = 38.9 bits (89), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 50/112 (44%), Gaps = 10/112 (8%)
Query: 24 PFSLKLWWRYL-VAKREAPFKKRFVIYERALKALPGSYKLWHAYLIERLSIVKNL--PIT 80
P+ W +Y + KR K+ +Y R L+A+P S LW I ++ +K P
Sbjct: 124 PYCYGYWKKYADLEKRHDNIKQSDEVYRRGLQAIPLSVDLW----IHYINFLKETLEPGD 179
Query: 81 HPEYETLNNTFERALV---TMHKMPRIWIMYLETLTSQKFITKARRTFDRAL 129
T+ TFE A++ T + ++W MY+ Q + + +DR L
Sbjct: 180 QETNTTIRGTFEHAVLAAGTDFRSDKLWEMYINWENEQGNLREVTAVYDRIL 231
Score = 35.8 bits (81), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 62/141 (43%), Gaps = 24/141 (17%)
Query: 33 YLVAKREAPFKKRFVIYERALKALPGSYKLWHAYLIERLSIVKNLPITHPEYETLNNTFE 92
+L+A R+A F K FV Y P Y W Y +L H + + +
Sbjct: 108 HLMAARKA-FDKFFVHY-------PYCYGYWKKYA--------DLEKRHDNIKQSDEVYR 151
Query: 93 RALVTMHKMPRIWIMYL----ETL--TSQKFITKARRTFDRALCALPVT-QHDRIWEIYL 145
R L + +WI Y+ ETL Q+ T R TF+ A+ A + D++WE+Y+
Sbjct: 152 RGLQAIPLSVDLWIHYINFLKETLEPGDQETNTTIRGTFEHAVLAAGTDFRSDKLWEMYI 211
Query: 146 RFVEQEGIPIETSLRVYRRYL 166
+ ++G E + VY R L
Sbjct: 212 NWENEQGNLREVTA-VYDRIL 231
>sp|Q86UA1|PRP39_HUMAN Pre-mRNA-processing factor 39 OS=Homo sapiens GN=PRPF39 PE=1 SV=3
Length = 669
Score = 41.2 bits (95), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 57/144 (39%), Gaps = 27/144 (18%)
Query: 424 TLWVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALEL 483
T WV + E + AR FD+ ++Y + W ++A++E RH N K + E+
Sbjct: 96 TGWVYLLQYVEQENHLMAARKAFDRFF-IHYP---YCYGYWKKYADLEKRHDNIKPSDEV 151
Query: 484 MRRATAEPSVEVR---------RRVAADGNEPVQMKLH--------------KSLRLWTF 520
RR + V + G+ + +S RLW
Sbjct: 152 YRRGLQAIPLSVDLWIHYINFLKETLDPGDPETNNTIRGTFEHAVLAAGTDFRSDRLWEM 211
Query: 521 YVDLEESLGNLESTRAVYERILDL 544
Y++ E GNL A+Y+RIL +
Sbjct: 212 YINWENEQGNLREVTAIYDRILGI 235
Score = 39.3 bits (90), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 50/111 (45%), Gaps = 8/111 (7%)
Query: 24 PFSLKLWWRYL-VAKREAPFKKRFVIYERALKALPGSYKLWHAYLIERLSIVKNLPITHP 82
P+ W +Y + KR K +Y R L+A+P S LW Y+ + + L P
Sbjct: 126 PYCYGYWKKYADLEKRHDNIKPSDEVYRRGLQAIPLSVDLWIHYIN---FLKETLDPGDP 182
Query: 83 E-YETLNNTFERALV---TMHKMPRIWIMYLETLTSQKFITKARRTFDRAL 129
E T+ TFE A++ T + R+W MY+ Q + + +DR L
Sbjct: 183 ETNNTIRGTFEHAVLAAGTDFRSDRLWEMYINWENEQGNLREVTAIYDRIL 233
>sp|Q6FW76|CLF1_CANGA Pre-mRNA-splicing factor CLF1 OS=Candida glabrata (strain ATCC 2001
/ CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=CLF1
PE=3 SV=1
Length = 695
Score = 40.0 bits (92), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 66/158 (41%), Gaps = 15/158 (9%)
Query: 16 YEEELLRNPFSLKLWWRYLVAKREA-PFKKRFVIYERALKALPGSYKLWHAYLIERLSIV 74
+E L RN +K W RY V + E ++ I+ERAL+ LW Y+ L +
Sbjct: 50 FEGYLKRNRLDVKQWMRYAVFEIEQHDMRRARSIFERALRVHISYVPLWIRYIESELKLG 109
Query: 75 KNLPITHPEYETLNNTFERALVTMHKMPRIWIMYLETLTSQKFITKARRTFDRALCALPV 134
I H N ERA+ + ++ ++W YL S R F + C+L
Sbjct: 110 Y---INHAR-----NILERAITKLPRVDKLWYKYLIVEESLAHFDIVRNLFQK-WCSLEP 160
Query: 135 TQHDRIWEIYLRF-VEQEGIPIETSLRVYRRYLKYDPS 171
H +W+ + F V QE E +Y +Y+ P
Sbjct: 161 AAH--VWDSFTDFEVRQER--YEDVRNIYSKYVLIHPQ 194
Score = 38.9 bits (89), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
Query: 91 FERALVTMHKMPRIWIMYLETLTSQKFITKARRTFDRALCALPVTQHDRIWEIYLRFVEQ 150
FERAL +WI Y+E+ +I AR +RA+ LP + D++W YL VE+
Sbjct: 84 FERALRVHISYVPLWIRYIESELKLGYINHARNILERAITKLP--RVDKLWYKYL-IVEE 140
Query: 151 EGIPIETSLRVYRRYLKYDP-SHIED-FIEFLVKSKLWQEA 189
+ +++++ +P +H+ D F +F V+ + +++
Sbjct: 141 SLAHFDIVRNLFQKWCSLEPAAHVWDSFTDFEVRQERYEDV 181
Score = 33.9 bits (76), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 25/129 (19%)
Query: 62 LWHAYLIERLSIVKNLPITHPEYETL-NNTFERALVTMHKMPRIWIMYLETLTSQKFITK 120
+W YL + ++P+ ++E L +N T K IWI+Y E Q + K
Sbjct: 362 IWIKYLTFLELTINDIPLCGQKFEELIHNIIPNDDFTFSK---IWILYAEFEIRQDNLEK 418
Query: 121 ARRTFDRALCALPVTQHDRIWEIYLRFVEQEGIPIETSLR-------VYRRYLKYDPSHI 173
AR R+L P + + + I +ET LR +Y +LK+DP ++
Sbjct: 419 ARSILGRSLGLCPKRKTFKYY-----------IDLETKLREFDRVRILYENFLKFDPLNL 467
Query: 174 ED---FIEF 179
+ ++EF
Sbjct: 468 DTWRAYVEF 476
>sp|Q5RDW9|CSTF3_PONAB Cleavage stimulation factor subunit 3 OS=Pongo abelii GN=CSTF3 PE=2
SV=1
Length = 717
Score = 39.7 bits (91), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 70/181 (38%), Gaps = 45/181 (24%)
Query: 17 EEELLRNPFSLKLWWRYLVAKREAPFKKRFVIYERALKALPGSYKLWHAYL--------- 67
E++L NP+ L W + + P K YER + P S + W Y+
Sbjct: 22 EKKLEENPYDLDAWSTLIREAQNQPIDKARKTYERLVAQFPSSGRFWKLYIEAEIKAKNY 81
Query: 68 --IER------------------LSIVKNLPITHPEY-ETLNNTFERAL--VTMHKMP-R 103
+E+ LS V+ P Y E + ++ AL + M M +
Sbjct: 82 DKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYKEKMAQAYDFALDKIGMEIMSYQ 141
Query: 104 IWIMYLETLTS---------QKFITKARRTFDRALCALPVTQHDRIWEIYLRFVEQEGIP 154
IW+ Y+ L + IT RR + R C P+ +++W Y ++ +EGI
Sbjct: 142 IWVDYINFLKGVEAVGSYAENQRITAVRRVYQRG-CVNPMINIEQLWRDYNKY--EEGIN 198
Query: 155 I 155
I
Sbjct: 199 I 199
>sp|Q9ZQA1|PP188_ARATH Pentatricopeptide repeat-containing protein At2g36730
OS=Arabidopsis thaliana GN=PCMP-E44 PE=3 SV=1
Length = 501
Score = 38.9 bits (89), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 60/132 (45%), Gaps = 13/132 (9%)
Query: 432 LYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELM-RRATAE 490
LY T K ++AR +FD+ + N + + + + E ++ L + F E++ +R +
Sbjct: 157 LYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECF---CEMIGKRFCPD 213
Query: 491 PSVEVRRRVAADGNEPVQMKLHK---------SLRLWTFYVDLEESLGNLESTRAVYERI 541
+ V A GN + +H + RL T VD+ G LE R V+ER+
Sbjct: 214 ETTMVVLLSACGGNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERM 273
Query: 542 LDLRIATPQIII 553
+D + T +I
Sbjct: 274 VDKNVWTWSAMI 285
>sp|Q12996|CSTF3_HUMAN Cleavage stimulation factor subunit 3 OS=Homo sapiens GN=CSTF3 PE=1
SV=1
Length = 717
Score = 38.9 bits (89), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 70/181 (38%), Gaps = 45/181 (24%)
Query: 17 EEELLRNPFSLKLWWRYLVAKREAPFKKRFVIYERALKALPGSYKLWHAYL--------- 67
E++L NP+ L W + + P K YER + P S + W Y+
Sbjct: 22 EKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVAQFPSSGRFWKLYIEAEIKAKNY 81
Query: 68 --IER------------------LSIVKNLPITHPEY-ETLNNTFERAL--VTMHKMP-R 103
+E+ LS V+ P Y E + ++ AL + M M +
Sbjct: 82 DKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYKEKMAQAYDFALDKIGMEIMSYQ 141
Query: 104 IWIMYLETLTS---------QKFITKARRTFDRALCALPVTQHDRIWEIYLRFVEQEGIP 154
IW+ Y+ L + IT RR + R C P+ +++W Y ++ +EGI
Sbjct: 142 IWVDYINFLKGVEAVGSYAENQRITAVRRVYQRG-CVNPMINIEQLWRDYNKY--EEGIN 198
Query: 155 I 155
I
Sbjct: 199 I 199
>sp|Q99LI7|CSTF3_MOUSE Cleavage stimulation factor subunit 3 OS=Mus musculus GN=Cstf3 PE=1
SV=1
Length = 717
Score = 38.9 bits (89), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 70/181 (38%), Gaps = 45/181 (24%)
Query: 17 EEELLRNPFSLKLWWRYLVAKREAPFKKRFVIYERALKALPGSYKLWHAYL--------- 67
E++L NP+ L W + + P K YER + P S + W Y+
Sbjct: 22 EKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVAQFPSSGRFWKLYIEAEIKAKNY 81
Query: 68 --IER------------------LSIVKNLPITHPEY-ETLNNTFERAL--VTMHKMP-R 103
+E+ LS V+ P Y E + ++ AL + M M +
Sbjct: 82 DKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYKEKMAQAYDFALDKIGMEIMSYQ 141
Query: 104 IWIMYLETLTS---------QKFITKARRTFDRALCALPVTQHDRIWEIYLRFVEQEGIP 154
IW+ Y+ L + IT RR + R C P+ +++W Y ++ +EGI
Sbjct: 142 IWVDYINFLKGVEAVGSYAENQRITAVRRVYQRG-CVNPMINIEQLWRDYNKY--EEGIN 198
Query: 155 I 155
I
Sbjct: 199 I 199
>sp|Q7KRW8|PRP39_DROME Pre-mRNA-processing factor 39 OS=Drosophila melanogaster GN=CG1646
PE=1 SV=1
Length = 1066
Score = 38.1 bits (87), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
Query: 24 PFSLKLWWRYL-VAKREAPFKKRFVIYERALKALPGSYKLWHAYLIERLSIVKNLPITHP 82
P+ W +Y KR+ + ++ER L+A+P S LW YL+ ++ H
Sbjct: 410 PYCYGYWRKYADYEKRKGIKANCYKVFERGLEAIPLSVDLWIHYLM-------HVKSNHG 462
Query: 83 EYET-LNNTFERALVTMH---KMPRIWIMYLETLTSQKFITKARRTFDRALCALPVTQHD 138
+ ET + + +ERA+ + ++W Y+ K + + +DR L A+P ++
Sbjct: 463 DDETFVRSQYERAVKACGLEFRSDKLWDAYIRWENESKRYHRVVQIYDR-LLAIPTQGYN 521
Query: 139 RIWEIYLRFVEQEGIPI 155
++ + + Q + I
Sbjct: 522 GHFDNFQDLINQHDVTI 538
>sp|P17886|CRN_DROME Protein crooked neck OS=Drosophila melanogaster GN=crn PE=2 SV=2
Length = 702
Score = 37.7 bits (86), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 63/133 (47%), Gaps = 16/133 (12%)
Query: 424 TLWVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALEL 483
TLW+ +A++ K + +AR ++D+AV + + + W ++ ME +N GA ++
Sbjct: 111 TLWLKYAEMEMKNKQVNHARNLWDRAVTI----MPRVNQFWYKYTYMEEMLENVAGARQV 166
Query: 484 MRRATA-EP---------SVEVRRRVAADGNEPVQ--MKLHKSLRLWTFYVDLEESLGNL 531
R +P + E+R + E + + +H ++ W + EES G +
Sbjct: 167 FERWMEWQPEEQAWQTYVNFELRYKEIDRAREIYERFVYVHPDVKNWIKFARFEESHGFI 226
Query: 532 ESTRAVYERILDL 544
+R V+ER ++
Sbjct: 227 HGSRRVFERAVEF 239
Score = 35.8 bits (81), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 89 NTFERALVTMHKMPRIWIMYLETLTSQKFITKARRTFDRALCALPVTQHDRIWEIYLRFV 148
+ +ERAL H+ +W+ Y E K + AR +DRA+ +P ++ W Y ++
Sbjct: 97 SIWERALDNEHRNVTLWLKYAEMEMKNKQVNHARNLWDRAVTIMPRV--NQFWYKYT-YM 153
Query: 149 EQEGIPIETSLRVYRRYLKYDP 170
E+ + + +V+ R++++ P
Sbjct: 154 EEMLENVAGARQVFERWMEWQP 175
Score = 35.4 bits (80), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 77/192 (40%), Gaps = 32/192 (16%)
Query: 381 NPHNVEQWHRRVKIFEGNPTKQIL--TYTEAVRTVDPMKAVG---KPHTLWVAFAKLYET 435
NP N + W +++ E + + TY A+ V P + LW+ +A LYE
Sbjct: 321 NPTNYDAWFDYLRLIEAEGDRDQIRETYERAISNVPPANEKNFWRRYIYLWINYA-LYEE 379
Query: 436 YK--DIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMRRATAEPSV 493
+ D R I+ +++ + +W +A+ E+R K + A R+A
Sbjct: 380 LEAEDAERTRQIYKTCLELIPHKQFTFSKLWLLYAQFEIRCKELQRA----RKALG---- 431
Query: 494 EVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILDLRIATPQIII 553
+ + + +L+ Y+DLE L E R +YE+ L+ P+ +
Sbjct: 432 -------------LAIGMCPRDKLFRGYIDLEIQLREFERCRMLYEKFLEF---GPENCV 475
Query: 554 NYALLLEVWTLL 565
+ E+ LL
Sbjct: 476 TWMKFAELENLL 487
>sp|Q12381|PRP1_SCHPO Pre-mRNA-splicing factor prp1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=prp1 PE=1 SV=1
Length = 906
Score = 37.4 bits (85), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 108/265 (40%), Gaps = 46/265 (17%)
Query: 251 LWTSLADYYIRRELFEKARDIFEEGMMTVVTVRDFSVIF-------DSYSQFEEIMV--- 300
LW +LA R E +E A+ + + T+ T + + + S+ E+IM
Sbjct: 406 LWLALA----RLETYENAKKVLNKARQTIRTSHEVWIAAARLEEQQGNVSRVEKIMARGV 461
Query: 301 -----SAKMAKPDLSVEEEEDDEEHGSAEDEDIRLDVNLSMAEFVKKVLNGFWLHDVKDV 355
+ M + D + E E E G+ + A+ + G L +
Sbjct: 462 SELQATGGMLQRDQWLSEAEKCETEGA-----------VITAQAIINTCLGVGLDEEDQF 510
Query: 356 DLRLARLEHLMNRRP-ELANSVL---LRQNPHNVEQWHRRVKIFEGNPTKQILTYTEAVR 411
D L + + R+ + A +V LR P + + W R V++ +++ TE+V
Sbjct: 511 DTWLDDAQSFIARKCIDCARAVFAFSLRVYPKSEKLWLRAVEL------EKLYGTTESVC 564
Query: 412 TV--DPMKAVGKPHTLWVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAE 469
++ +++ K LW+ +AK + DIA AR I +A + N + + IW
Sbjct: 565 SILEKAVESCPKAEILWLLYAKERKNVNDIAGARNILGRAFEYNSNSEE----IWLAAVR 620
Query: 470 MELRHKNFKGALELMRRATAEPSVE 494
+E + + A +L+ RA E E
Sbjct: 621 IEFVNNENERARKLLARARIESGTE 645
>sp|Q1JPZ7|PRP39_DANRE Pre-mRNA-processing factor 39 OS=Danio rerio GN=prpf39 PE=2 SV=2
Length = 752
Score = 36.6 bits (83), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 52/116 (44%), Gaps = 8/116 (6%)
Query: 20 LLRNPFSLKLWWRYL-VAKREAPFKKRFVIYERALKALPGSYKLWHAYLIERLSIVKNLP 78
L P+ W +Y + ++ + +Y R L+A+P S LW Y+ + +N
Sbjct: 193 FLHYPYCYGYWKKYADIERKHGYIQMADEVYRRGLQAIPLSVDLWLHYIT---FLRENQD 249
Query: 79 ITHPEYET-LNNTFERALV---TMHKMPRIWIMYLETLTSQKFITKARRTFDRALC 130
+ E E+ + ++E A++ T + R+W Y+ T Q + +DR LC
Sbjct: 250 TSDGEAESRIRASYEHAVLACGTDFRSDRLWEAYIAWETEQGKLANVTAIYDRLLC 305
>sp|A7MB10|RRP5_BOVIN Protein RRP5 homolog OS=Bos taurus GN=PDCD11 PE=2 SV=1
Length = 1874
Score = 36.2 bits (82), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 60/139 (43%), Gaps = 25/139 (17%)
Query: 424 TLWVAFAKLYETYKDIANARVIFDKAVQVN--YKTVDHLASIWC------EWAEMELRH- 474
+WVA L Y + +F++AVQ N K HLA I+ E E+ R
Sbjct: 1662 NVWVALLNLENMYGSQESLTKVFERAVQYNEPLKVFLHLADIYTKSEKFQEAGELYNRML 1721
Query: 475 KNFK---------GALELMRRATAEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLE 525
K F+ GA L+RR AE S V +R E + K H + + + LE
Sbjct: 1722 KRFRQEKAVWVKYGAF-LLRRGKAEASHRVMQRAL----ECLPKKEH--VDVIAKFAQLE 1774
Query: 526 ESLGNLESTRAVYERILDL 544
LG+ E RA++E L +
Sbjct: 1775 FQLGDAERARAIFESTLSI 1793
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.137 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 219,760,593
Number of Sequences: 539616
Number of extensions: 9102327
Number of successful extensions: 33494
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 47
Number of HSP's that attempted gapping in prelim test: 32574
Number of HSP's gapped (non-prelim): 600
length of query: 594
length of database: 191,569,459
effective HSP length: 123
effective length of query: 471
effective length of database: 125,196,691
effective search space: 58967641461
effective search space used: 58967641461
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 64 (29.3 bits)