Query 007652
Match_columns 594
No_of_seqs 192 out of 821
Neff 5.1
Searched_HMMs 46136
Date Thu Mar 28 13:31:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007652.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007652hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00148 potassium transporter 100.0 5E-200 1E-204 1658.4 51.5 593 1-594 179-785 (785)
2 PLN00151 potassium transporter 100.0 4E-199 8E-204 1650.7 52.6 589 1-594 256-852 (852)
3 PLN00150 potassium ion transpo 100.0 2E-198 3E-203 1645.9 52.1 584 1-594 196-779 (779)
4 PLN00149 potassium transporter 100.0 3E-198 6E-203 1646.1 52.7 588 1-594 179-779 (779)
5 TIGR00794 kup potassium uptake 100.0 2E-179 4E-184 1485.8 50.1 538 1-594 150-688 (688)
6 PRK10745 trkD potassium transp 100.0 1E-162 2E-167 1334.3 43.6 497 1-594 126-622 (622)
7 PF02705 K_trans: K+ potassium 100.0 7E-154 2E-158 1255.3 35.3 420 1-424 115-534 (534)
8 COG3158 Kup K+ transporter [In 100.0 2E-149 4E-154 1202.9 41.1 497 1-594 131-627 (627)
9 TIGR00911 2A0308 L-type amino 92.5 0.5 1.1E-05 52.6 9.0 87 19-109 165-255 (501)
10 COG0531 PotE Amino acid transp 88.6 12 0.00026 40.5 15.0 179 18-200 133-324 (466)
11 TIGR00909 2A0306 amino acid tr 84.6 17 0.00037 39.3 13.6 167 21-200 135-316 (429)
12 TIGR03813 put_Glu_GABA_T putat 82.8 28 0.00061 38.6 14.6 54 90-143 195-250 (474)
13 PRK10655 potE putrescine trans 82.4 36 0.00078 37.2 15.0 43 21-63 125-170 (438)
14 TIGR00907 2A0304 amino acid pe 80.9 11 0.00024 41.7 10.6 24 300-323 454-477 (482)
15 PRK10435 cadB lysine/cadaverin 79.9 56 0.0012 35.9 15.5 23 22-44 124-146 (435)
16 PF13520 AA_permease_2: Amino 77.1 11 0.00024 40.6 8.9 223 19-257 118-367 (426)
17 TIGR00930 2a30 K-Cl cotranspor 76.9 2E+02 0.0043 35.7 21.2 25 19-43 203-227 (953)
18 PRK15049 L-asparagine permease 75.4 39 0.00085 38.0 12.9 100 22-125 147-258 (499)
19 TIGR00906 2A0303 cationic amin 74.3 66 0.0014 37.0 14.5 45 19-63 161-208 (557)
20 TIGR03810 arg_ornith_anti argi 67.9 1.6E+02 0.0035 32.6 15.4 44 158-201 274-317 (468)
21 PF14362 DUF4407: Domain of un 64.1 67 0.0015 33.7 11.0 85 240-324 14-111 (301)
22 TIGR00908 2A0305 ethanolamine 61.0 1.1E+02 0.0023 33.5 12.3 24 21-44 123-146 (442)
23 TIGR00910 2A0307_GadC glutamat 61.0 1.3E+02 0.0028 34.1 13.2 52 91-142 196-249 (507)
24 PRK11357 frlA putative fructos 60.7 2.1E+02 0.0045 31.4 14.5 45 20-64 128-175 (445)
25 PRK10238 aromatic amino acid t 60.0 1.2E+02 0.0025 33.7 12.4 113 22-138 129-250 (456)
26 PRK10249 phenylalanine transpo 58.1 1.5E+02 0.0031 33.0 12.8 102 22-125 138-247 (458)
27 PRK11021 putative transporter; 58.0 2.7E+02 0.0059 30.1 14.7 98 19-126 115-216 (410)
28 TIGR00905 2A0302 transporter, 57.2 1.1E+02 0.0025 33.8 11.8 25 20-44 130-154 (473)
29 PF06570 DUF1129: Protein of u 56.9 45 0.00098 33.3 7.8 19 300-318 180-198 (206)
30 PRK10746 putative transport pr 53.7 3.1E+02 0.0066 30.5 14.5 38 87-124 197-237 (461)
31 KOG3145 Cystine transporter Cy 53.1 15 0.00032 39.4 3.8 88 23-121 213-340 (372)
32 PRK11387 S-methylmethionine tr 51.6 2.3E+02 0.0051 31.4 13.1 32 94-125 211-244 (471)
33 COG4059 MtrE Tetrahydromethano 51.0 15 0.00033 37.8 3.3 39 287-325 243-287 (304)
34 KOG3643 GABA receptor [Signal 44.9 18 0.00038 40.6 2.9 91 194-288 225-325 (459)
35 PRK10644 arginine:agmatin anti 44.1 1.5E+02 0.0032 32.6 10.0 24 21-44 127-150 (445)
36 PRK11049 D-alanine/D-serine/gl 42.8 5E+02 0.011 28.8 14.0 107 94-201 216-333 (469)
37 TIGR00913 2A0310 amino acid pe 40.5 3.3E+02 0.0071 30.1 12.1 29 97-125 205-235 (478)
38 TIGR01773 GABAperm gamma-amino 37.3 5.9E+02 0.013 27.9 15.3 101 21-124 128-238 (452)
39 PRK10580 proY putative proline 36.7 4.4E+02 0.0096 29.0 12.4 98 23-125 127-237 (457)
40 KOG4742 Predicted chitinase [G 35.1 17 0.00037 38.6 0.9 33 112-153 172-210 (286)
41 TIGR03428 ureacarb_perm permea 27.8 8.7E+02 0.019 26.9 16.0 25 19-43 144-168 (475)
42 PF02508 Rnf-Nqr: Rnf-Nqr subu 26.6 2.2E+02 0.0047 28.5 7.1 87 220-307 15-110 (190)
43 TIGR01940 nqrE NADH:ubiquinone 26.4 1.9E+02 0.0042 29.3 6.7 47 220-266 14-62 (200)
44 PF05545 FixQ: Cbb3-type cytoc 26.4 66 0.0014 24.9 2.7 28 309-336 20-47 (49)
45 PF00324 AA_permease: Amino ac 24.9 76 0.0017 35.1 3.9 36 91-126 202-239 (478)
46 PRK13108 prolipoprotein diacyl 24.6 70 0.0015 36.3 3.5 81 20-105 28-114 (460)
47 PRK05151 electron transport co 24.6 2.5E+02 0.0054 28.4 7.0 47 220-266 15-63 (193)
48 COG2179 Predicted hydrolase of 23.8 17 0.00036 36.0 -1.3 60 529-590 55-118 (175)
49 PF05313 Pox_P21: Poxvirus P21 21.7 1.2E+02 0.0027 30.3 4.1 62 122-193 88-149 (189)
50 PF05297 Herpes_LMP1: Herpesvi 21.6 31 0.00067 36.9 0.0 61 262-325 125-190 (381)
51 cd05900 Ig_Aggrecan Immunoglob 21.5 1.1E+02 0.0024 27.7 3.6 28 400-427 75-102 (112)
52 TIGR00145 FTR1 family protein. 21.0 5.2E+02 0.011 27.5 9.0 31 303-333 79-109 (283)
No 1
>PLN00148 potassium transporter; Provisional
Probab=100.00 E-value=5.5e-200 Score=1658.45 Aligned_cols=593 Identities=45% Similarity=0.850 Sum_probs=531.5
Q ss_pred CCcccccccccCCCCCceehhhHHHHHHHHHhhccccccccccchhhHHHHHHHHHHHhhhhhhcccCcceeeecChHHH
Q 007652 1 MSAVSGLQGEIHGFGESALVIVSIIILVALFSIQRFGTGKVGFMFAPVLALWFFSLGSIGLYNLVKYDISVVRAFNPIYI 80 (594)
Q Consensus 1 LSAveGl~v~~p~l~~~~vv~is~~ILv~LF~~Q~~GT~kvg~~F~Pim~~Wf~~i~~~Giyni~~~~p~Vl~A~nP~y~ 80 (594)
||||||||++.|++++++||+|||+||++||++||+||+|||++|||||++||++||++|+|||++|||+||+||||+|+
T Consensus 179 LSAVeGl~v~~p~~~~~~vv~is~~ILv~LF~vQ~~GT~kVg~~FgPIm~lWf~~i~~iGiyni~~~~p~Vl~AlnP~y~ 258 (785)
T PLN00148 179 LSSVSGLQVTETKLTDGELVLLACVILVGLFALQHCGTHRVAFMFAPIVIIWLLSIGSIGLYNIIHWNPKIIHALSPYYI 258 (785)
T ss_pred HHHhccceecCCCCCCCeehhHHHHHHHHHHHHhccccHHHHhhhhhHHHHHHHHHHHHHHHHHHhcCHHHhhhcCHHHH
Confidence 79999999999999889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCcchhhhcccchhhhcchhHhhhccCCCcccceeehhhhhHhHHHHHHhccchhhhccCCCcccCcccccccC
Q 007652 81 YLFFKKNGKDAWSALGGCVLCITGAEAMFADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMKYPDSANRIFYDSVPD 160 (594)
Q Consensus 81 ~~f~~~~~~~g~~~LG~v~L~iTG~EAlyADlGHF~~~~I~~aw~~~V~P~L~l~Y~GQ~A~l~~~p~~~~npFy~~~P~ 160 (594)
++||++||++||.+||||+||+||+|||||||||||++|||+||+++|||||+|||+||||||++||++.+||||+++|+
T Consensus 259 ~~ff~~~~~~g~~~LGgV~L~iTGaEALyADlGHFg~~~Iriaw~~~V~P~L~L~Y~GQaA~ll~~p~~~~npFf~~iP~ 338 (785)
T PLN00148 259 IKFFRVTGKDGWISLGGILLSITGTEAMFADLGHFTAASIRLAFATVIYPCLVVQYMGQAAFLSKNIPSIPNSFYDSIPD 338 (785)
T ss_pred HHHHHhCCCceEEeecchheeccchhhhhhhccCCCccceEEeeeehHHHHHHHHHcchHHHHhcCcccccCcHHHhCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchHHHHHHHHHHHHHhhhheeechhhHHHHHHHhCCCCceeEeeCCCccCCccccchHHHHHHHHhheeeEEeCCchhH
Q 007652 161 SLFWPVFVLAALAAMIASQAMISATFSCIKQAMALGCFPRLKIIHTSRKRMGQIYIPVINWFLMIMCVVVVSIFQSTTDI 240 (594)
Q Consensus 161 ~~~~p~~ilAtlAaIIASQA~Isg~FSi~~Qa~~Lg~fPr~ki~hTS~~~~GQIYiP~vNw~Lmi~~l~v~~~F~~s~~l 240 (594)
|++||++++||+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|+++|++||||++|
T Consensus 339 ~~~~P~~vlAtlAtIIASQA~ISg~FSi~~Qai~Lg~fPrvkIvhTS~~~~GQIYIP~vNw~Lmv~~i~vv~~F~~s~~l 418 (785)
T PLN00148 339 PVFWPVFVIATLAAIVGSQAVITATFSIVKQCHALGCFPRVKVVHTSKHIYGQIYIPEINWILMILTLAVTIGFRDTTLI 418 (785)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCccCCceeeHHHHHHHHHHHHHhheeeccchhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhchhhhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhHhcccCCccHHHHHHHHHHHHHHHhhHh
Q 007652 241 ANAYGIAEVGVMLVSSTLVTIVMLLIWQTNLLLVLCFPLVFGSVELLYMSAVLSKIAEGGWLPLAFASVFLCVMYIWNYG 320 (594)
Q Consensus 241 ~~AYGiaV~~~m~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~ie~~f~sa~l~Ki~~GGW~pl~ia~~~~~iM~~W~~G 320 (594)
|||||+||++||++||||+++||+.+||||++++++|+++|+++|++|||||+.|||||||+||++|++++++|++||||
T Consensus 419 a~AYGiAV~~vM~iTT~L~~lV~~~~W~~~~~~~~~f~~~F~~ie~~f~sa~l~Ki~~GGW~pl~ia~v~~~iM~~W~~G 498 (785)
T PLN00148 419 GNAYGLACMTVMFITTFLMALVIIFVWQKSIILAALFLLFFGFIEGVYLSAALMKVPQGGWVPLVLSAIFMSIMYIWHYG 498 (785)
T ss_pred HHhhhhheeeHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChHHHHHhcCCCCCcccceeEEEeecCCCCchhHHHHHhhhcCccceEEEEEEEEEecccccCCCce
Q 007652 321 SVLKYRSEVREKISMDFLLDLGSTLGTVRVPGIGLLYNELVQGIPSIFGQFLLSLPAIHSTIVFVCIKYVPVPMVRLEER 400 (594)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~vf~t~~~~~vP~~~~h~~~~~~~lhev~Vfv~i~~~~vP~V~~~eR 400 (594)
++++++++.+|++|++++.++.++.++.||||+|+|||++.+|+|++|.||++|||++||++||||||++|+|+||++||
T Consensus 499 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~RVpG~~vf~t~~~~gvP~~f~h~~~~~~~lHe~~Vfv~ik~~~vP~V~~~eR 578 (785)
T PLN00148 499 TRKKYNFDLHNKVSLKWLLGLGPSLGIVRVPGIGLIYSELATGVPAIFSHFVTNLPAFHKVLVFVCVKSVPVPYVSPEER 578 (785)
T ss_pred HHHHHHHHhhcCCCHHHHHHhcccCCCcccCcEEEEecCCCCCCCHHHHHHHHhCCcccceEEEEEEEECcccccChhhe
Confidence 99999999999999999999888888899999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEecCCCCcEEEEEEEEeeccccccChhHHHHHHHHHHHHHHHHhhhhHHhh---h---ccc-cCcc-ccccccCCC
Q 007652 401 FLFRRVGPKDYHMFRCVTRYGYKDVRKEDHHVFEQLLVASLEKFLRKEAQDLALE---R---NLL-ESDL-DSVSVASRD 472 (594)
Q Consensus 401 ~~v~~~~~~~~~~yr~vvryGY~d~~~~~~~~f~~~lv~~L~~FI~~e~~~~~~~---~---~~~-~~~~-~~~~~~~~~ 472 (594)
|+++|++++++|+|||++||||||.+++ ++|||++|+++|++|||.|+.+...+ + |++ +++. .+....++.
T Consensus 579 ~~v~~i~~~~yr~~r~vvryGy~d~~~~-~~dFe~~Lv~~L~~FIr~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 657 (785)
T PLN00148 579 FLIGRVCPRPYRMYRCIVRYGYKDIQRD-DGDFENMLVQSIAEFIQMEAEEPQSSASESSSNDGRMAVISTRDVQSSSLL 657 (785)
T ss_pred EEEEEecCCCceEEEEEEEEccCccccc-chHHHHHHHHHHHHHHHhhhhcccccccccccccccccccccccccccccc
Confidence 9999999999999999999999999876 99999999999999999998532100 0 111 1000 000000000
Q ss_pred CCCCC-----CCCccccccccccccccccCCCCCccccccccc-CCCcCCCCCccHHHHHHHHHHHHhCCcEEEeeecEE
Q 007652 473 PEASG-----SYGTEELKIPLMHERRFDESGTSASEETTSALP-SSVMALDEDPSLEYELSALREAIDSGFTYLLAHGDV 546 (594)
Q Consensus 473 ~~~~~-----~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~-~~~~~~~~~~~v~~El~~L~~A~eaGVvYIlG~s~v 546 (594)
...++ .+...+.+....+..++..|.+++...++++++ ..+++.+.+++++||+++|++|||+||+||+||++|
T Consensus 658 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~~L~~A~eaGVvYIlG~s~v 737 (785)
T PLN00148 658 MVSEQELADIDDSIQSSKSLTLQSLQSAYEDENPGQSRRRRVRFQLPENPGMDPSVREELMDLIEAKEAGVAYIMGHSYV 737 (785)
T ss_pred ccccccccccccccccccccccccccccccccccccccccceeecccccccccchHHHHHHHHHHHHHcCcEEEeccceE
Confidence 00000 000000000001111111121121223345666 233333446789999999999999999999999999
Q ss_pred EEcCCCChhHHHHHHHHHHHHhhhccCCCccccCCCCCeEEeeeEEEC
Q 007652 547 RAKKKSFFLKKLVINYFYAFLRRNCRAGAANMSVPHMNILQVGMTYMV 594 (594)
Q Consensus 547 kar~~Ss~lKk~vIn~~Y~FLRkNcR~~~~~L~IPh~~LlEVGmvy~v 594 (594)
|||++|+|+||++||++|+|||||||+|.+.|+|||+|||||||+|||
T Consensus 738 ~Ar~~Ss~~KKivIn~~Y~FLRkNcR~~~~~L~IPh~~LleVGM~Y~V 785 (785)
T PLN00148 738 KARRSSSFLKKLAIDIGYSFLRKNCRGPAVALNIPHISLIEVGMIYYV 785 (785)
T ss_pred EEcCCCcHHHHHHHHHHHHHHHHhccCcccccCCChHHeEEcceEEEC
Confidence 999999999999999999999999999999999999999999999997
No 2
>PLN00151 potassium transporter; Provisional
Probab=100.00 E-value=3.5e-199 Score=1650.65 Aligned_cols=589 Identities=70% Similarity=1.188 Sum_probs=526.0
Q ss_pred CCcccccccccCCCCCceehhhHHHHHHHHHhhccccccccccchhhHHHHHHHHHHHhhhhhhcccCcceeeecChHHH
Q 007652 1 MSAVSGLQGEIHGFGESALVIVSIIILVALFSIQRFGTGKVGFMFAPVLALWFFSLGSIGLYNLVKYDISVVRAFNPIYI 80 (594)
Q Consensus 1 LSAveGl~v~~p~l~~~~vv~is~~ILv~LF~~Q~~GT~kvg~~F~Pim~~Wf~~i~~~Giyni~~~~p~Vl~A~nP~y~ 80 (594)
||||||||++.|++++++||+|||+||++||++||+||+|||++|||||++||++||++|+|||++|||+||+||||+|+
T Consensus 256 LSAVeGL~v~~p~l~~~~VV~Is~~ILv~LF~~Q~~GT~kVg~~FgPImllWFl~i~~iGiynI~~~~p~Vl~AlnP~Y~ 335 (852)
T PLN00151 256 MSAVSGLKVGVPGFGQDAVVMISVAFLVILFSVQRFGTSKVGFAFGPALALWFCSLGGIGIYNLVKYDSSVFRAFNPVYI 335 (852)
T ss_pred hhhhccccccCCcCCCCeehhHHHHHHHHHHHHHhccchhhhhhhccHHHHHHHHHHHHHHHHHHhcCHHHHhhhCHHHH
Confidence 79999999999999889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCcchhhhcccchhhhcchhHhhhccCCCcccceeehhhhhHhHHHHHHhccchhhhccCCCcccCcccccccC
Q 007652 81 YLFFKKNGKDAWSALGGCVLCITGAEAMFADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMKYPDSANRIFYDSVPD 160 (594)
Q Consensus 81 ~~f~~~~~~~g~~~LG~v~L~iTG~EAlyADlGHF~~~~I~~aw~~~V~P~L~l~Y~GQ~A~l~~~p~~~~npFy~~~P~ 160 (594)
++||+|||++||.+||||+||+||+|||||||||||++|||+||+++|||||+|||+||||||++||++++||||+++|+
T Consensus 336 ~~Ff~~~~~~gw~~LGgVvLciTGaEALfADLGHFg~~sIqiaw~~~V~P~LlL~Y~GQaA~L~~~p~~~~npFy~svP~ 415 (852)
T PLN00151 336 YYFFKRNSTKAWSALGGCVLCATGSEAMFADLGYFSVRSIQLAFTCLVLPCLLLAYMGQAAYLMKNPDSAEQIFFSSVPS 415 (852)
T ss_pred HHHHHhCCCceEEEecceeeeeccchhhhcccCCCCccceeeeehhhHHHHHHHHHcchHHHHhcCcccccCcHHHhCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchHHHHHHHHHHHHHhhhheeechhhHHHHHHHhCCCCceeEeeCCCccCCccccchHHHHHHHHhheeeEEeCCchhH
Q 007652 161 SLFWPVFVLAALAAMIASQAMISATFSCIKQAMALGCFPRLKIIHTSRKRMGQIYIPVINWFLMIMCVVVVSIFQSTTDI 240 (594)
Q Consensus 161 ~~~~p~~ilAtlAaIIASQA~Isg~FSi~~Qa~~Lg~fPr~ki~hTS~~~~GQIYiP~vNw~Lmi~~l~v~~~F~~s~~l 240 (594)
|++||+|++||+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|+++|++||||++|
T Consensus 416 ~~~wP~~vlAtlAaIIASQA~ISgtFSii~Qai~Lg~fPRvkIvHTS~~~~GQIYIP~vNw~Lmv~~i~v~l~F~~s~~l 495 (852)
T PLN00151 416 SLFWPVFLIANLAALIASRAMTTATFSCIKQSMALGCFPRLKIIHTSRKFMGQIYIPVINWFLLVMCLVVVCSFRSITDI 495 (852)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEeCCCccCCceeeHHHHHHHHHHHHhheeeecCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhchhhhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhHhcccCCccHHHHHHHHHHHHHHHhhHh
Q 007652 241 ANAYGIAEVGVMLVSSTLVTIVMLLIWQTNLLLVLCFPLVFGSVELLYMSAVLSKIAEGGWLPLAFASVFLCVMYIWNYG 320 (594)
Q Consensus 241 ~~AYGiaV~~~m~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~ie~~f~sa~l~Ki~~GGW~pl~ia~~~~~iM~~W~~G 320 (594)
|||||+||++||++||||+++||+.+||||++++++|+++|+++|++|||||+.|||||||+||++|++++++|++||||
T Consensus 496 ~~AYGiAV~~vM~iTT~L~~lV~~~~W~~~~~~~~~f~~~F~~ie~~f~sA~l~Ki~~GGW~Pl~la~v~~~iM~~W~yG 575 (852)
T PLN00151 496 GNAYGIAEVGVMMVSTILVTLVMLLIWQTNIFLVLCFPVVFLSVELVFFSSVLSSVGDGGWIPLVFASVFLCIMYIWNYG 575 (852)
T ss_pred HHHhhhhhhhhhhHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChHHHHHhcCCCCCcccceeEEEeecCCCCchhHHHHHhhhcCccceEEEEEEEEEecccccCCCce
Q 007652 321 SVLKYRSEVREKISMDFLLDLGSTLGTVRVPGIGLLYNELVQGIPSIFGQFLLSLPAIHSTIVFVCIKYVPVPMVRLEER 400 (594)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~vf~t~~~~~vP~~~~h~~~~~~~lhev~Vfv~i~~~~vP~V~~~eR 400 (594)
++++|+++.+|++|++++.++.++.++.||||+|+|||++++|+|++|.||++|||++||++||||||++|+|+||++||
T Consensus 576 ~~~~~~~~~~~~vs~~~~~~L~~~~~~~RVpGiglf~t~~~~gvP~~f~h~i~~~~alHe~~Vfv~ik~~~vP~V~~~eR 655 (852)
T PLN00151 576 SKLKYQSEVRQKLSMDLMRELGSNLGTIRAPGIGLLYNELVKGIPAIFGHFLTTLPAIHSTIIFVCIKYVPVPVVPQEER 655 (852)
T ss_pred HHHHHHHHhhcCCCHHHHHHhcccCCCcccCcEEEEecCCCCCCCHHHHHHHHhCCcccceEEEEEEEECcccccChhhe
Confidence 99999999999999999999999998999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEecCCCCcEEEEEEEEeeccccccChhHHHHHHHHHHHHHHHHhhhhHHhhhccccCcccccc-ccCCCCCCCCCC
Q 007652 401 FLFRRVGPKDYHMFRCVTRYGYKDVRKEDHHVFEQLLVASLEKFLRKEAQDLALERNLLESDLDSVS-VASRDPEASGSY 479 (594)
Q Consensus 401 ~~v~~~~~~~~~~yr~vvryGY~d~~~~~~~~f~~~lv~~L~~FI~~e~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 479 (594)
|+++|++++++++|||++||||||.++++++|||++|+++|++|||.|+.+...+++.++..+++.+ ........++.
T Consensus 656 ~lv~ri~~~~~~~yr~vvrYGY~D~~~~~~~dFe~~Lv~~l~~fi~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 734 (852)
T PLN00151 656 FLFRRVCPKDYHMFRCIARYGYKDVRKENHQAFEQLLIESLEKFIRREAQERALESDGNDDTDDEDSVTSSRVLIAPNG- 734 (852)
T ss_pred EEEEEcCCCCCCEEEEEEEEeecccccccchHHHHHHHHHHHHHHHhhhhhccccccccccccccccccccccccCCCc-
Confidence 9999999999999999999999999874489999999999999999998532111111000000000 00000000000
Q ss_pred Ccccccccccccccccc-C-C-CC-Cccc---ccccccCCCcCCCCCccHHHHHHHHHHHHhCCcEEEeeecEEEEcCCC
Q 007652 480 GTEELKIPLMHERRFDE-S-G-TS-ASEE---TTSALPSSVMALDEDPSLEYELSALREAIDSGFTYLLAHGDVRAKKKS 552 (594)
Q Consensus 480 ~~~~~~~~~~~~~~~~~-e-~-~~-~~~~---~~~~v~~~~~~~~~~~~v~~El~~L~~A~eaGVvYIlG~s~vkar~~S 552 (594)
+....+.+......+.. + . +. +.+. ..++++ ..+.++++++|+++|++|||+||+||+||++||||++|
T Consensus 735 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~El~~l~~a~e~Gv~yilG~~~v~a~~~S 810 (852)
T PLN00151 735 SVYSLGVPLLADYRLTSKPIPEASTSEEVSPVLPSSSM----SSDEDQSLEYELSFIREAKESGVVYLLGHGDVRARKNS 810 (852)
T ss_pred cccccccccccccccccccccccccccccccccccccc----ccccCccHHHHHHHHHHHHHcCcEEEeccceEEEcCCC
Confidence 00000000000000000 0 0 00 0000 001222 12235789999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHHHhhhccCCCccccCCCCCeEEeeeEEEC
Q 007652 553 FFLKKLVINYFYAFLRRNCRAGAANMSVPHMNILQVGMTYMV 594 (594)
Q Consensus 553 s~lKk~vIn~~Y~FLRkNcR~~~~~L~IPh~~LlEVGmvy~v 594 (594)
+|+||++||++|+|||||||+|.++|+|||++||||||+|||
T Consensus 811 ~~~Kk~~in~~Y~fLRkN~R~~~~~L~iP~~~lleVGm~Y~v 852 (852)
T PLN00151 811 WFIKKLVINYFYAFLRKNCRRGIANLSVPHSNIMQVGMTYMV 852 (852)
T ss_pred cHHHHHHHHHHHHHHHHhccCcccccCCChHHeEEeceEEEC
Confidence 999999999999999999999999999999999999999997
No 3
>PLN00150 potassium ion transporter family protein; Provisional
Probab=100.00 E-value=1.5e-198 Score=1645.85 Aligned_cols=584 Identities=49% Similarity=0.903 Sum_probs=526.1
Q ss_pred CCcccccccccCCCCCceehhhHHHHHHHHHhhccccccccccchhhHHHHHHHHHHHhhhhhhcccCcceeeecChHHH
Q 007652 1 MSAVSGLQGEIHGFGESALVIVSIIILVALFSIQRFGTGKVGFMFAPVLALWFFSLGSIGLYNLVKYDISVVRAFNPIYI 80 (594)
Q Consensus 1 LSAveGl~v~~p~l~~~~vv~is~~ILv~LF~~Q~~GT~kvg~~F~Pim~~Wf~~i~~~Giyni~~~~p~Vl~A~nP~y~ 80 (594)
|||||||++..|++++++||+|||+||++||++||+||+|||++|||||++||++||++|+|||++|||+||+|+||+|+
T Consensus 196 LSAVeGL~v~~p~l~~~~Vv~is~~ILv~LF~iQ~~GT~kVg~~FgPIm~~Wf~~i~~iGiyni~~~~p~Vl~AlnP~y~ 275 (779)
T PLN00150 196 LSAVVGIKAASSGLDTNLVTIISCVILVILFSLQRFGTHKVSFLFAPIFLCWFFSLALIGCYNIIKWDKSVFLAFNPLYI 275 (779)
T ss_pred hhhhccccccCCCCCCCeehhhHHHHHHHHHHHHhccchhhhhhhccHHHHHHHHHHHHHHHHHHhcCHHHHhhcCHHHH
Confidence 79999999999999889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCcchhhhcccchhhhcchhHhhhccCCCcccceeehhhhhHhHHHHHHhccchhhhccCCCcccCcccccccC
Q 007652 81 YLFFKKNGKDAWSALGGCVLCITGAEAMFADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMKYPDSANRIFYDSVPD 160 (594)
Q Consensus 81 ~~f~~~~~~~g~~~LG~v~L~iTG~EAlyADlGHF~~~~I~~aw~~~V~P~L~l~Y~GQ~A~l~~~p~~~~npFy~~~P~ 160 (594)
++||++||++||.+||||+||+||+|||||||||||++|||+||+++|||||+|||+||||||++||++.+||||+++|+
T Consensus 276 ~~ff~~~~~~g~~~LG~V~L~iTGaEALyADlGHFg~~~Iriaw~~~V~P~LlL~Y~GQaA~ll~~p~~~~npFf~~iP~ 355 (779)
T PLN00150 276 VSFFIRNGRQGWESLGGIVLCMTGTEAMFADLGHFTVKSMQIAFTSLVYPCLLLTYLGQAAYLVKHMEDVNDPFYRSLPK 355 (779)
T ss_pred HHHHHhCCCceEEEecceeeeecchhhhhccccCCCccceeeeehhhHHHHHHHHHcchHHHHhcCcccccCcHHHhCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchHHHHHHHHHHHHHhhhheeechhhHHHHHHHhCCCCceeEeeCCCccCCccccchHHHHHHHHhheeeEEeCCchhH
Q 007652 161 SLFWPVFVLAALAAMIASQAMISATFSCIKQAMALGCFPRLKIIHTSRKRMGQIYIPVINWFLMIMCVVVVSIFQSTTDI 240 (594)
Q Consensus 161 ~~~~p~~ilAtlAaIIASQA~Isg~FSi~~Qa~~Lg~fPr~ki~hTS~~~~GQIYiP~vNw~Lmi~~l~v~~~F~~s~~l 240 (594)
|++||++++||+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|+++|++||||++|
T Consensus 356 ~~~~P~~vlAtlAtIIASQA~ISg~FSi~~Qai~Lg~fPrvkI~hTS~~~~GQIYIP~vNw~Lmv~~i~vv~~F~~s~~l 435 (779)
T PLN00150 356 PIYWPIFVLATCSAMIASQAMISATFSIVKQAMALGCFPRVKIVHTSNKVHGQVYIPEINWILMVLCLVITAGFRDTDEI 435 (779)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCcccCCceeeHHHHHHHHHHHHhheEEecChHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhchhhhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhHhcccCCccHHHHHHHHHHHHHHHhhHh
Q 007652 241 ANAYGIAEVGVMLVSSTLVTIVMLLIWQTNLLLVLCFPLVFGSVELLYMSAVLSKIAEGGWLPLAFASVFLCVMYIWNYG 320 (594)
Q Consensus 241 ~~AYGiaV~~~m~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~ie~~f~sa~l~Ki~~GGW~pl~ia~~~~~iM~~W~~G 320 (594)
|||||+||++||++||||+++||+.+||||++++++|+++|+++|++|||||+.|||||||+||++|++++++|++||||
T Consensus 436 ~~AYGiAV~~vM~iTT~L~~~v~~~~W~~~~~~~~~f~~~f~~ie~~f~sa~l~Ki~~GGW~pl~ia~v~~~iM~~W~~G 515 (779)
T PLN00150 436 GNAYGIAVVGVMIITTCLMTLVMIIIWRKHILLALLFFTVFAIIEGIYFSAVLFKVTQGGWVPLVIAAVFGTVMYTWHYG 515 (779)
T ss_pred HHHhhhheehhhHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHhhhccCCcHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChHHHHHhcCCCCCcccceeEEEeecCCCCchhHHHHHhhhcCccceEEEEEEEEEecccccCCCce
Q 007652 321 SVLKYRSEVREKISMDFLLDLGSTLGTVRVPGIGLLYNELVQGIPSIFGQFLLSLPAIHSTIVFVCIKYVPVPMVRLEER 400 (594)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~vf~t~~~~~vP~~~~h~~~~~~~lhev~Vfv~i~~~~vP~V~~~eR 400 (594)
++++++++.+|++|++++.++.++.++.||||+|+|||++++|+|++|.||++|||++||++||+|||++|+|+||++||
T Consensus 516 ~~~~~~~~~~~~v~~~~~~~l~~~~~~~RvpG~~vf~t~~~~gvP~~f~h~v~~~~~lhe~~Vfl~i~~~~vP~V~~~eR 595 (779)
T PLN00150 516 TRKRYLYEMQHKVSVGWLLGLGPSLGLVRVPGIGLMYTDLAHGVPPLFSHFITNLPAIHSTVVFVCIKYLPVNTVPQDER 595 (779)
T ss_pred HHHHHHHHhhcCCCHHHHHhhcccCCCcccCcEEEEEeCCCCCCCHHHHHHHHhCCcccceEEEEEEEECcccccChhhe
Confidence 99999999999999999998888888899999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEecCCCCcEEEEEEEEeeccccccChhHHHHHHHHHHHHHHHHhhhhHHhhhccccCccccccccCCCCCCCCCCC
Q 007652 401 FLFRRVGPKDYHMFRCVTRYGYKDVRKEDHHVFEQLLVASLEKFLRKEAQDLALERNLLESDLDSVSVASRDPEASGSYG 480 (594)
Q Consensus 401 ~~v~~~~~~~~~~yr~vvryGY~d~~~~~~~~f~~~lv~~L~~FI~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (594)
|+++|++++++++|||++||||||+.++ ++|||++|+++|++|||+|+.+...+++..+++.+..+...+. .+....
T Consensus 596 ~~v~~i~~~~~r~~r~vvryGy~d~~~d-~~dFE~~LvesL~~FIr~e~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 672 (779)
T PLN00150 596 FLIRRIGPRAYSMYRCAARYGYTDLEKK-DDNFEQLLIASLERFIEIESFREQSDLESMAASWTPEELMGEG--NSVGSG 672 (779)
T ss_pred EEEEEecCCCceEEEEEEEEccCcCccc-chHHHHHHHHHHHHHHHhhhhcccccccccccccccccccccC--Cccccc
Confidence 9999999999999999999999999876 8999999999999999999753222211111111000000000 000000
Q ss_pred ccccccccccccccccCCCCCcccccccccCCCcCCCCCccHHHHHHHHHHHHhCCcEEEeeecEEEEcCCCChhHHHHH
Q 007652 481 TEELKIPLMHERRFDESGTSASEETTSALPSSVMALDEDPSLEYELSALREAIDSGFTYLLAHGDVRAKKKSFFLKKLVI 560 (594)
Q Consensus 481 ~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~~~~~~~~~~~v~~El~~L~~A~eaGVvYIlG~s~vkar~~Ss~lKk~vI 560 (594)
..+..+......++..+.+. ..+++++. .+.+++++||+++|++|||+||+||+||++||||++|+|+||++|
T Consensus 673 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~----~~~~~~v~eEl~~L~~A~eaGVvYIlG~~~v~Ak~~Ss~~KK~vI 745 (779)
T PLN00150 673 LFTQYDQSDINFATSQEWKR---PSSQEDSV----SGHSSDTQDEVAFLNKCKEAGVVYILGNNDVKARKDSGFFKKVII 745 (779)
T ss_pred cccccccccccccccccccc---cccccccc----ccccccHHHHHHHHHHHHHcCcEEEeccceEEEcCCCcHHHHHHH
Confidence 00000000000011111110 00112221 223578999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhccCCCccccCCCCCeEEeeeEEEC
Q 007652 561 NYFYAFLRRNCRAGAANMSVPHMNILQVGMTYMV 594 (594)
Q Consensus 561 n~~Y~FLRkNcR~~~~~L~IPh~~LlEVGmvy~v 594 (594)
|++|+|||||||+|.+.|+|||+|||||||+|||
T Consensus 746 N~~Y~FLRkNcR~~~~~L~IPh~~LleVGmvY~V 779 (779)
T PLN00150 746 NYIYTFLRRISRDSEVVLNIPHECLLKVGMVYYV 779 (779)
T ss_pred HHHHHHHHHhccCCccccCCChHHeEEeceEEEC
Confidence 9999999999999999999999999999999997
No 4
>PLN00149 potassium transporter; Provisional
Probab=100.00 E-value=3e-198 Score=1646.06 Aligned_cols=588 Identities=47% Similarity=0.825 Sum_probs=524.0
Q ss_pred CCcccccccccCCCCCcee-hhhHHHHHHHHHhhccccccccccchhhHHHHHHHHHHHhhhhhhcccCcceeeecChHH
Q 007652 1 MSAVSGLQGEIHGFGESAL-VIVSIIILVALFSIQRFGTGKVGFMFAPVLALWFFSLGSIGLYNLVKYDISVVRAFNPIY 79 (594)
Q Consensus 1 LSAveGl~v~~p~l~~~~v-v~is~~ILv~LF~~Q~~GT~kvg~~F~Pim~~Wf~~i~~~Giyni~~~~p~Vl~A~nP~y 79 (594)
|||||||++..|...++++ ++|||+||++||++||+||+|||++|||||++||++||++|+|||++|||+||+||||+|
T Consensus 179 LSAVeGl~v~~~~~~~~~vvv~is~~ILv~LF~~Q~~GT~kvg~~FgPIml~Wf~~i~~iGiyni~~~~p~Vl~AlnP~y 258 (779)
T PLN00149 179 FSAVSGLELSMSKEHHKYVEVPVACIILIGLFALQHYGTHRVGFLFAPVVLTWLLCISAIGVYNIFHWNPHVYQALSPYY 258 (779)
T ss_pred HHHhhcccccCCCccCCceehHHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHHHHHHHHhcCHhHhhhcCHHH
Confidence 7999999999966544455 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCcchhhhcccchhhhcchhHhhhccCCCcccceeehhhhhHhHHHHHHhccchhhhccCCC---cccCcccc
Q 007652 80 IYLFFKKNGKDAWSALGGCVLCITGAEAMFADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMKYPD---SANRIFYD 156 (594)
Q Consensus 80 ~~~f~~~~~~~g~~~LG~v~L~iTG~EAlyADlGHF~~~~I~~aw~~~V~P~L~l~Y~GQ~A~l~~~p~---~~~npFy~ 156 (594)
+++||+|||++||.+||||+||+||+|||||||||||++|||+||+++|||||+|||+||||||++||+ +++||||+
T Consensus 259 ~~~f~~~~~~~g~~~LGgV~L~iTG~EALyADlGHF~~~~Ir~aw~~~V~P~L~L~Y~GQaA~l~~~p~~~~~~~~pFy~ 338 (779)
T PLN00149 259 MYKFLKKTQRGGWMSLGGILLCITGSEAMFADLGHFSQLSIKIAFTSLVYPSLILAYMGQAAYLSKHHVIESDYRIGFYV 338 (779)
T ss_pred HHHHHHHCCCceeEeecchhhcccchhhhhhcccCCCccceeeeehhhHHHHHHHHhhhHHHHHhcCcchhccccCcHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999996 56679999
Q ss_pred cccCcchHHHHHHHHHHHHHhhhheeechhhHHHHHHHhCCCCceeEeeCCCccCCccccchHHHHHHHHhheeeEEeCC
Q 007652 157 SVPDSLFWPVFVLAALAAMIASQAMISATFSCIKQAMALGCFPRLKIIHTSRKRMGQIYIPVINWFLMIMCVVVVSIFQS 236 (594)
Q Consensus 157 ~~P~~~~~p~~ilAtlAaIIASQA~Isg~FSi~~Qa~~Lg~fPr~ki~hTS~~~~GQIYiP~vNw~Lmi~~l~v~~~F~~ 236 (594)
++|+|++||++++||+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|+++|++|||
T Consensus 339 ~iP~~~~~P~~vlAtlAaIIASQA~ISg~FSii~Qa~~Lg~fPrvkIvhTS~~~~GQIYIP~vNw~Lmv~~i~vv~~F~~ 418 (779)
T PLN00149 339 SVPEKLRWPVLVIAILAAVVGSQAIITGTFSIIKQCSALGCFPKVKIVHTSSKIHGQIYIPEINWTLMLLCLAVTVGFRD 418 (779)
T ss_pred hCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCcccCCceeeHHHHHHHHHHHHhheeEecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhHHhhhhchhhhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhHhcccCCccHHHHHHHHHHHHHHH
Q 007652 237 TTDIANAYGIAEVGVMLVSSTLVTIVMLLIWQTNLLLVLCFPLVFGSVELLYMSAVLSKIAEGGWLPLAFASVFLCVMYI 316 (594)
Q Consensus 237 s~~l~~AYGiaV~~~m~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~ie~~f~sa~l~Ki~~GGW~pl~ia~~~~~iM~~ 316 (594)
|++||||||+||++||++||||+++||+.+|+||++++++|+++|+++|++|||||+.|||||||+||++|++++++|++
T Consensus 419 s~~l~~AYGiAV~~vM~iTT~L~~lv~~~~W~~~~~~~~~f~~~f~~ie~~f~sa~l~Ki~~GGW~pl~ia~v~~~iM~~ 498 (779)
T PLN00149 419 TKRLGNASGLAVITVMLVTTCLMSLVIVLCWHKSVLLAICFIFFFGTIEALYFSASLIKFLEGAWVPIALSFIFLLVMYV 498 (779)
T ss_pred hHHHHHHhhhhhehHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHhHHHHHHHHHhcCCChHHHHHhcCCCCCcccceeEEEeecCCCCchhHHHHHhhhcCccceEEEEEEEEEecccccC
Q 007652 317 WNYGSVLKYRSEVREKISMDFLLDLGSTLGTVRVPGIGLLYNELVQGIPSIFGQFLLSLPAIHSTIVFVCIKYVPVPMVR 396 (594)
Q Consensus 317 W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~vf~t~~~~~vP~~~~h~~~~~~~lhev~Vfv~i~~~~vP~V~ 396 (594)
||||++++|+++.+|++|++++.++.++.++.||||+|+|||++.+|+|++|.||++|||++||++||+|||++|+|+||
T Consensus 499 W~~G~~~~~~~~~~~~v~~~~~~~l~~~~~~~RvpG~~vf~t~~~~gvP~~f~h~~~~~~~lhe~~Vfv~ik~~~vP~V~ 578 (779)
T PLN00149 499 WHYGTLKRYEFDVQNKVSINWLLSLGPSLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVLVFLCIKSVPVPHVR 578 (779)
T ss_pred HHHHHHHHHHHHhhcCCCHHHHHHhccCCCCcccCcEEEEEcCCCCCCCHHHHHHHHhCCcccceEEEEEEEECcccccC
Confidence 99999999999999999999999999888899999999999999999999999999999999999999999999999999
Q ss_pred CCceEEEEEecCCCCcEEEEEEEEeeccccccChhHHHHHHHHHHHHHHHHhhhhHHhhh------ccc-cCc-cccccc
Q 007652 397 LEERFLFRRVGPKDYHMFRCVTRYGYKDVRKEDHHVFEQLLVASLEKFLRKEAQDLALER------NLL-ESD-LDSVSV 468 (594)
Q Consensus 397 ~~eR~~v~~~~~~~~~~yr~vvryGY~d~~~~~~~~f~~~lv~~L~~FI~~e~~~~~~~~------~~~-~~~-~~~~~~ 468 (594)
++|||+++|++++++|+|||++||||||..++ ++|||++|+++|++|||.|+.+...++ |++ +++ +++.+.
T Consensus 579 ~~eR~~v~~i~~~~~~~~r~vvryGy~d~~~d-~~dFE~~Lve~L~~FI~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 657 (779)
T PLN00149 579 PEERFLVGRIGPKEYRLYRCIVRYGYRDVHKD-DMEFEKDLVCSIAEFIRSEKPEPNGAPENEEGEDERMTVVGTCSTHL 657 (779)
T ss_pred hhheEEEEEecCCCceEEEEEEEEeecccccc-chHHHHHHHHHHHHHHHhhhhcccccccccccccccccccccccccc
Confidence 99999999999999999999999999999886 999999999999999999974221111 111 000 000000
Q ss_pred cCCCCCCCCCCCccccccccccccccccCCCCCccccccccc-CCCcCCCCCccHHHHHHHHHHHHhCCcEEEeeecEEE
Q 007652 469 ASRDPEASGSYGTEELKIPLMHERRFDESGTSASEETTSALP-SSVMALDEDPSLEYELSALREAIDSGFTYLLAHGDVR 547 (594)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~-~~~~~~~~~~~v~~El~~L~~A~eaGVvYIlG~s~vk 547 (594)
.+.....++..+....+.+..+...+. + .+..+++++ ..+++.+.+++++||+++|++|||+||+||+||++||
T Consensus 658 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~v~eEl~~L~~A~eaGVvYIlG~s~v~ 732 (779)
T PLN00149 658 EGIQLREDDSDKQEPAGTSELREIRSP-P----VSRPKKRVRFVVPESPKIDRGAREELQELMEAREAGMAYILGHSYVR 732 (779)
T ss_pred cccccccccccccccccccccccccCc-c----ccCcccceeeccccccccchhHHHHHHHHHHHHHcCcEEEecCceEE
Confidence 000000000000000000000000000 0 011124555 2333444568899999999999999999999999999
Q ss_pred EcCCCChhHHHHHHHHHHHHhhhccCCCccccCCCCCeEEeeeEEEC
Q 007652 548 AKKKSFFLKKLVINYFYAFLRRNCRAGAANMSVPHMNILQVGMTYMV 594 (594)
Q Consensus 548 ar~~Ss~lKk~vIn~~Y~FLRkNcR~~~~~L~IPh~~LlEVGmvy~v 594 (594)
|||+|+|+||++||++|+|||||||+|.+.|+|||+|||||||+|||
T Consensus 733 Ar~~Ss~~KK~vIn~~Y~FLRkNcR~~~~~L~IPh~~LleVGmvY~v 779 (779)
T PLN00149 733 AKQGSSMMKKLVINYGYDFLRRNSRGPRYALSVPHASTLEVGMVYHV 779 (779)
T ss_pred EcCCCcHHHHHHHHHHHHHHHHhccCcccccCCChHHeEEeceEEEC
Confidence 99999999999999999999999999999999999999999999997
No 5
>TIGR00794 kup potassium uptake protein. Proteins of the KUP family include the KUP (TrkD) protein of E. coli, a partially sequenced ORF from Lactococcus lactis, high affinity K+ uptake systems (Hak1) of the yeast Debaryomyces occidentalis as well as the fungus, Neurospora crassa, and several homologues in plants. While the E. coli KUP protein is assumed to be a secondary transporter, and uptake is blocked by protonophores such as CCCP (but not arsenate), the energy coupling mechanism has not been defined. However, the N. crassa protein has been shown to be a K+:H+ symporter, establishing that the KUP family consists of secondary carriers. The plant high affinity (20mM) K+ transporter can complement K+ uptake defects in E. coli.
Probab=100.00 E-value=2e-179 Score=1485.75 Aligned_cols=538 Identities=43% Similarity=0.785 Sum_probs=511.0
Q ss_pred CCcccccccccCCCCCceehhhHHHHHHHHHhhccccccccccchhhHHHHHHHHHHHhhhhhhcccCcceeeecChHHH
Q 007652 1 MSAVSGLQGEIHGFGESALVIVSIIILVALFSIQRFGTGKVGFMFAPVLALWFFSLGSIGLYNLVKYDISVVRAFNPIYI 80 (594)
Q Consensus 1 LSAveGl~v~~p~l~~~~vv~is~~ILv~LF~~Q~~GT~kvg~~F~Pim~~Wf~~i~~~Giyni~~~~p~Vl~A~nP~y~ 80 (594)
|||||||+++.|++++++|+||||+||++||++||+||+|||++|||||++||++||++|+|||++|||+||+|+||+||
T Consensus 150 LSAVeGl~v~~p~~~~~~Vv~it~~ILv~LF~iQ~~GT~kvg~~FgPim~vWF~~l~~~Gi~~I~~~~P~Vl~AlnP~ya 229 (688)
T TIGR00794 150 LSAVSGLEIVAPSLSDTWVVPISCIILVLLFLIQRFGTAKVGFTFAPIILVWLLLLAGIGIYNIVKFNPEVLKALSPYYA 229 (688)
T ss_pred hhhhccccccCCCCCCCeehhHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHHHHHHHHhcCHHHHhHhCHHHH
Confidence 79999999999999889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCcchhhhcccchhhhcchhHhhhccCCCcccceeehhhhhHhHHHHHHhccchhhhccCCCcccCcccccccC
Q 007652 81 YLFFKKNGKDAWSALGGCVLCITGAEAMFADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMKYPDSANRIFYDSVPD 160 (594)
Q Consensus 81 ~~f~~~~~~~g~~~LG~v~L~iTG~EAlyADlGHF~~~~I~~aw~~~V~P~L~l~Y~GQ~A~l~~~p~~~~npFy~~~P~ 160 (594)
++||.+||+.||.+||+|+||+||+||||||||||||+|||+||+++|||||+|||+||||||++||++.+||||+++|+
T Consensus 230 ~~f~~~~~~~~~~~LG~V~L~iTGaEALyADmGHFg~~~Ir~aw~~~V~P~L~LnY~GQgA~ll~~p~~~~NpFf~~~P~ 309 (688)
T TIGR00794 230 VQFFIEYGTVGWVSLGGVVLSITGVEAMFADLGHFGKLPIQLAWFTFVYPSLILCYIGQAAYLSKHPEAIKNPFFLSIPD 309 (688)
T ss_pred HHHHHHCCCceeeeccchhheeccHhhhhcccCCCCcccceeehHHHHHHHHHHHHcchHHHHhcCcchhcCcHHHhCch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchHHHHHHHHHHHHHhhhheeechhhHHHHHHHhCCCCceeEeeCCCccCCccccchHHHHHHHHhheeeEEeCCchhH
Q 007652 161 SLFWPVFVLAALAAMIASQAMISATFSCIKQAMALGCFPRLKIIHTSRKRMGQIYIPVINWFLMIMCVVVVSIFQSTTDI 240 (594)
Q Consensus 161 ~~~~p~~ilAtlAaIIASQA~Isg~FSi~~Qa~~Lg~fPr~ki~hTS~~~~GQIYiP~vNw~Lmi~~l~v~~~F~~s~~l 240 (594)
|++||++++||+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|+++|++||||++|
T Consensus 310 ~~~~p~~vlAtlAtIIASQA~IsG~FSl~~Qai~Lg~~Pr~~I~hTS~~~~GQIYiP~vNw~Lmv~~i~vvl~F~~S~~l 389 (688)
T TIGR00794 310 WALWPLFIIATLAAIIASQAVISGVFSITSQAVRLGCFPRVKIIHTSEKYHGQIYIPFVNWLLMLGVIAVTAGFRDTNNL 389 (688)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCccCCceeeHHHHHHHHHHHHheeEEecChHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhchhhhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhHhcccCCccHHHHHHHHHHHHHHHhhHh
Q 007652 241 ANAYGIAEVGVMLVSSTLVTIVMLLIWQTNLLLVLCFPLVFGSVELLYMSAVLSKIAEGGWLPLAFASVFLCVMYIWNYG 320 (594)
Q Consensus 241 ~~AYGiaV~~~m~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~ie~~f~sa~l~Ki~~GGW~pl~ia~~~~~iM~~W~~G 320 (594)
|+|||+||++||++||+|+++||+.+||||++++++|+++|+.+|+.|||||+.|+|||||+||++|++++++|++|+||
T Consensus 390 a~AYGiaVt~tM~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~ff~anl~Ki~~GGW~pl~ia~i~~~iM~~W~~G 469 (688)
T TIGR00794 390 GAAYGIAVTGTFLVTTCLMTVVMTIVWKWNIYFVALFLLVFLSVELIYFSSNLDKVPEGGWFPLSLSGIFMSVMTTWRYG 469 (688)
T ss_pred HHHhhhhhhhhhHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChHHHHHhcCC-CCCcccceeEEEeecCCCCchhHHHHHhhhcCccceEEEEEEEEEecccccCCCc
Q 007652 321 SVLKYRSEVREKISMDFLLDLGST-LGTVRVPGIGLLYNELVQGIPSIFGQFLLSLPAIHSTIVFVCIKYVPVPMVRLEE 399 (594)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~rvpG~~vf~t~~~~~vP~~~~h~~~~~~~lhev~Vfv~i~~~~vP~V~~~e 399 (594)
++++++++.++++|++++++.+.+ .+..|+||+|+|+|++++++|++|.||++|||++||++||+||+++|+|+||++|
T Consensus 470 ~~~~~~~~~~~~~~~~~~~~~l~~~~~l~rvpG~avf~t~~~~~vP~~~~h~l~~~~~lhe~~vfltv~~~~~P~Vp~~e 549 (688)
T TIGR00794 470 RFRKLRRDHEHRVSISALIASLQPKPGLVRVPGIGIYYSNLVNGIPAVFGHLVTKFPSIHEVFIFLSLRTLDAPTVHNEE 549 (688)
T ss_pred HHHHHHHHhhcCCCHHHHHHHHhhcCCCcccCCeEEEeeCCccCCCHHHHHHHHhCCccceEEEEEEEEECCCCcCCcce
Confidence 999999999999999999885543 4458999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEecCCCCcEEEEEEEEeeccccccChhHHHHHHHHHHHHHHHHhhhhHHhhhccccCccccccccCCCCCCCCCC
Q 007652 400 RFLFRRVGPKDYHMFRCVTRYGYKDVRKEDHHVFEQLLVASLEKFLRKEAQDLALERNLLESDLDSVSVASRDPEASGSY 479 (594)
Q Consensus 400 R~~v~~~~~~~~~~yr~vvryGY~d~~~~~~~~f~~~lv~~L~~FI~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (594)
||+++++++++ |+|||++||||||+++. +++|+++++++|++|++++..+...+ ++
T Consensus 550 R~~v~~l~~~~-g~~rv~~~yGf~e~~~~-~~~l~~~ii~~L~~fi~~~~~~~~~~--------~~-------------- 605 (688)
T TIGR00794 550 RVQISQVGPTE-GMYRCVIRYGFMDTPNE-PKELAAHIVNSIVEFVEHECGFNLNN--------LE-------------- 605 (688)
T ss_pred EEEEEEEcCCC-CEEEEEEEecCCcCCCc-HHHHHHHHHHHHHHHHHHHhhhcccc--------cc--------------
Confidence 99999999754 89999999999999998 88999999999999999875310000 00
Q ss_pred CccccccccccccccccCCCCCcccccccccCCCcCCCCCccHHHHHHHHHHHHhCCcEEEeeecEEEEcCCCChhHHHH
Q 007652 480 GTEELKIPLMHERRFDESGTSASEETTSALPSSVMALDEDPSLEYELSALREAIDSGFTYLLAHGDVRAKKKSFFLKKLV 559 (594)
Q Consensus 480 ~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~~~~~~~~~~~v~~El~~L~~A~eaGVvYIlG~s~vkar~~Ss~lKk~v 559 (594)
..+ ++ +.+.+.+||++++++++|+||+|++||++++++++|+++||+.
T Consensus 606 ---~~~-----------~~------------------~~~~~~eee~~~~~~~~~~gv~yflg~~~~~~~~~~~~~~~~~ 653 (688)
T TIGR00794 606 ---ELS-----------DK------------------RCRMPIEEIFENAMETKEHGYSYFMGEESLILKKRSPILRKIR 653 (688)
T ss_pred ---ccc-----------cc------------------ccccchHHHHHHHHHHhhcCCEEEeeceEEEECCCccHHHHHH
Confidence 000 00 0011357899999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhccCCCccccCCCCCeEEeeeEEEC
Q 007652 560 INYFYAFLRRNCRAGAANMSVPHMNILQVGMTYMV 594 (594)
Q Consensus 560 In~~Y~FLRkNcR~~~~~L~IPh~~LlEVGmvy~v 594 (594)
||++|.|||||||++...++|||+|++||||.||+
T Consensus 654 I~~lf~~l~rn~~~~~~~~~iP~~rvvevG~~~~i 688 (688)
T TIGR00794 654 VNHVFLFIRRNARRAPKVLEIPPDRLLEVGTVVEI 688 (688)
T ss_pred HHHHHHHHHHhccChhhheeCChhhEEEEeeEEEC
Confidence 99999999999999999999999999999999996
No 6
>PRK10745 trkD potassium transport protein Kup; Provisional
Probab=100.00 E-value=1.1e-162 Score=1334.27 Aligned_cols=497 Identities=32% Similarity=0.583 Sum_probs=468.2
Q ss_pred CCcccccccccCCCCCceehhhHHHHHHHHHhhccccccccccchhhHHHHHHHHHHHhhhhhhcccCcceeeecChHHH
Q 007652 1 MSAVSGLQGEIHGFGESALVIVSIIILVALFSIQRFGTGKVGFMFAPVLALWFFSLGSIGLYNLVKYDISVVRAFNPIYI 80 (594)
Q Consensus 1 LSAveGl~v~~p~l~~~~vv~is~~ILv~LF~~Q~~GT~kvg~~F~Pim~~Wf~~i~~~Giyni~~~~p~Vl~A~nP~y~ 80 (594)
|||||||++..|+++ ++|+||||+||++||++||+||+|||++|||||++||++||++|+|||++ ||+||+|+||+||
T Consensus 126 LSAVEGL~v~~p~l~-~~Vvpit~~ILv~LF~iQ~~GT~~vG~~FgPIm~vWF~~i~~~Gi~~I~~-~P~Vl~AlnP~ya 203 (622)
T PRK10745 126 MSAIEGLEIVAPQLD-TYIVPLSIIVLTLLFMIQKHGTGMVGKLFAPIMLTWFLTLAVLGLRSIIA-NPEVLHALNPMWA 203 (622)
T ss_pred HHHhhcccccCCCCC-CccHHHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHHHHHHHhc-CHHHHhHhCHHHH
Confidence 699999999999996 69999999999999999999999999999999999999999999999998 8999999999999
Q ss_pred HHHHHhcCcchhhhcccchhhhcchhHhhhccCCCcccceeehhhhhHhHHHHHHhccchhhhccCCCcccCcccccccC
Q 007652 81 YLFFKKNGKDAWSALGGCVLCITGAEAMFADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMKYPDSANRIFYDSVPD 160 (594)
Q Consensus 81 ~~f~~~~~~~g~~~LG~v~L~iTG~EAlyADlGHF~~~~I~~aw~~~V~P~L~l~Y~GQ~A~l~~~p~~~~npFy~~~P~ 160 (594)
++||.+||..||.+||+|+||+||+||||||||||||+|||+||+++|||||+|||+||||||++||++.+||||+++|+
T Consensus 204 ~~f~~~~~~~gf~~LG~V~L~vTGaEALYADmGHFG~~~Ir~aW~~~v~P~L~LnY~GQgA~ll~~p~~~~NpFf~~~P~ 283 (622)
T PRK10745 204 VHFFLEYKTVSFFALGAVVLAITGVEALYADMGHFGKFPIRLAWFTVVLPSLVLNYFGQGALLLKNPEAIKNPFFLLAPD 283 (622)
T ss_pred HHHHHhCCCceEEEecceeeeccchHHHhhccCCCCccceeeeehhhHHHHHHHHhcchHHHHhcCchhhcCcHHHhCCh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchHHHHHHHHHHHHHhhhheeechhhHHHHHHHhCCCCceeEeeCCCccCCccccchHHHHHHHHhheeeEEeCCchhH
Q 007652 161 SLFWPVFVLAALAAMIASQAMISATFSCIKQAMALGCFPRLKIIHTSRKRMGQIYIPVINWFLMIMCVVVVSIFQSTTDI 240 (594)
Q Consensus 161 ~~~~p~~ilAtlAaIIASQA~Isg~FSi~~Qa~~Lg~fPr~ki~hTS~~~~GQIYiP~vNw~Lmi~~l~v~~~F~~s~~l 240 (594)
|++||++++||+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|++++++||||++|
T Consensus 284 ~~~~p~viLATlAtIIASQAvISGaFSl~~QAi~Lg~~Prl~I~hTS~~~~GQIYIP~vNw~Lmv~~i~~vl~F~sS~~L 363 (622)
T PRK10745 284 WALIPLLILATLATVIASQAVISGVFSLTRQAVRLGYLPPMRIIHTSEMESGQIYIPFVNWLLYVAVVIVIVSFEHSSNL 363 (622)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhCCCCCceEEeCCCccCCceeeHHHHHHHHHHHHeeEEEecCchHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhchhhhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhHhcccCCccHHHHHHHHHHHHHHHhhHh
Q 007652 241 ANAYGIAEVGVMLVSSTLVTIVMLLIWQTNLLLVLCFPLVFGSVELLYMSAVLSKIAEGGWLPLAFASVFLCVMYIWNYG 320 (594)
Q Consensus 241 ~~AYGiaV~~~m~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~ie~~f~sa~l~Ki~~GGW~pl~ia~~~~~iM~~W~~G 320 (594)
|+|||+||++||++||+|++++++.+|||+++++++++++|+.+|+.||+||+.|++||||+|+++|++++++|++|++|
T Consensus 364 a~AYGiAVt~tM~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~ff~anl~Ki~~GGW~pl~ia~v~~~iM~tW~~G 443 (622)
T PRK10745 364 AAAYGIAVTGTMVLTSILSTTVARKNWHWNKYFVALILIAFLCIDIPLFSANLDKLLSGGWLPLSLGLVMFIVMTTWKSE 443 (622)
T ss_pred HHHhhhhheeHhHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChHHHHHhcCCCCCcccceeEEEeecCCCCchhHHHHHhhhcCccceEEEEEEEEEecccccCCCce
Q 007652 321 SVLKYRSEVREKISMDFLLDLGSTLGTVRVPGIGLLYNELVQGIPSIFGQFLLSLPAIHSTIVFVCIKYVPVPMVRLEER 400 (594)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~vf~t~~~~~vP~~~~h~~~~~~~lhev~Vfv~i~~~~vP~V~~~eR 400 (594)
+++++++++++++|++++++.+++.++.|+||+|+|+|+..+++|+++.|++||||++||++||+||+++|+|+||++||
T Consensus 444 ~~~~~~~~~~~~~~l~~f~~~l~~~~~~rvpG~avflt~~~~~vP~~l~h~lk~~~~lhe~~v~l~v~~~~~P~V~~~eR 523 (622)
T PRK10745 444 RFRLLRRMHEHGNSLEAMIASLEKSPPVRVPGTAVYMSRAINVIPFALLHNLKHNKVLHERVILLTLRTEDAPYVHNVRR 523 (622)
T ss_pred HHHHHHHHHhcCCCHHHHHHHhhhcCCCccCeEEEEEeCCCCCCCHHHHHHhhcCCccceEEEEEEEEECCCcccCcccE
Confidence 99999999999999999999998888789999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEecCCCCcEEEEEEEEeeccccccChhHHHHHHHHHHHHHHHHhhhhHHhhhccccCccccccccCCCCCCCCCCC
Q 007652 401 FLFRRVGPKDYHMFRCVTRYGYKDVRKEDHHVFEQLLVASLEKFLRKEAQDLALERNLLESDLDSVSVASRDPEASGSYG 480 (594)
Q Consensus 401 ~~v~~~~~~~~~~yr~vvryGY~d~~~~~~~~f~~~lv~~L~~FI~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (594)
++++++++ |+|||++||||||+++. ++.+ +...+ + +. ..
T Consensus 524 ~~v~~l~~---g~~rv~~~yGf~e~~~i-~~~L------------~~~~~------~--g~-------------~~---- 562 (622)
T PRK10745 524 VQIEQLSP---TFWRVVASYGWRETPNV-EEVF------------HRCGL------E--GL-------------SC---- 562 (622)
T ss_pred EEEEEECC---CEEEEEEEecCCCCCCH-HHHH------------HHHHh------C--CC-------------CC----
Confidence 99999996 69999999999999865 2221 11100 0 00 00
Q ss_pred ccccccccccccccccCCCCCcccccccccCCCcCCCCCccHHHHHHHHHHHHhCCcEEEeeecEEEEcCCCChhHHHHH
Q 007652 481 TEELKIPLMHERRFDESGTSASEETTSALPSSVMALDEDPSLEYELSALREAIDSGFTYLLAHGDVRAKKKSFFLKKLVI 560 (594)
Q Consensus 481 ~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~~~~~~~~~~~v~~El~~L~~A~eaGVvYIlG~s~vkar~~Ss~lKk~vI 560 (594)
| -+.++|.+||+.++..++++. .++--
T Consensus 563 --------------------------------------------~--------~~~~s~fl~r~~l~~~~~~~m-~~wr~ 589 (622)
T PRK10745 563 --------------------------------------------R--------MMETSFFMSHESLILGKRPWY-LRLRG 589 (622)
T ss_pred --------------------------------------------C--------ccceEEEEeeEEEEeCCCCCc-HHHHH
Confidence 0 036899999999998888872 11211
Q ss_pred HHHHHHHhhhccCCCccccCCCCCeEEeeeEEEC
Q 007652 561 NYFYAFLRRNCRAGAANMSVPHMNILQVGMTYMV 594 (594)
Q Consensus 561 n~~Y~FLRkNcR~~~~~L~IPh~~LlEVGmvy~v 594 (594)
.+|.||.||++++...+++|++|++|+|+.+|+
T Consensus 590 -~lF~~m~rna~~~~~~f~lP~~rvvelG~~v~i 622 (622)
T PRK10745 590 -KLFLLLQRNALRAPDQFEIPPNRVIELGTQVEI 622 (622)
T ss_pred -HHHHHHHHcCCCHHHHhCCCcccEEEEeeEEeC
Confidence 389999999999999999999999999999986
No 7
>PF02705 K_trans: K+ potassium transporter; InterPro: IPR003855 This is a family of K+ potassium transporters that are conserved across phyla, having both bacterial (KUP) [], yeast (HAK) [], and plant (AtKT) [] sequences as members.; GO: 0015079 potassium ion transmembrane transporter activity, 0071805 potassium ion transmembrane transport, 0016020 membrane
Probab=100.00 E-value=7.2e-154 Score=1255.28 Aligned_cols=420 Identities=44% Similarity=0.804 Sum_probs=416.3
Q ss_pred CCcccccccccCCCCCceehhhHHHHHHHHHhhccccccccccchhhHHHHHHHHHHHhhhhhhcccCcceeeecChHHH
Q 007652 1 MSAVSGLQGEIHGFGESALVIVSIIILVALFSIQRFGTGKVGFMFAPVLALWFFSLGSIGLYNLVKYDISVVRAFNPIYI 80 (594)
Q Consensus 1 LSAveGl~v~~p~l~~~~vv~is~~ILv~LF~~Q~~GT~kvg~~F~Pim~~Wf~~i~~~Giyni~~~~p~Vl~A~nP~y~ 80 (594)
|||||||++..|+++ ++|+||||+||++||++||+||+|||++|||||++||++||++|+|||++ +|+||+|+||+|+
T Consensus 115 lSAvEGl~v~~p~~~-~~Vv~it~~ILv~LF~iQ~~GT~~ig~~FgPim~~WF~~l~~~G~~~I~~-~p~Vl~A~nP~ya 192 (534)
T PF02705_consen 115 LSAVEGLEVATPSLE-PYVVPITIAILVGLFAIQRFGTAKIGKLFGPIMLLWFLTLGVLGLYNIIQ-HPEVLKALNPYYA 192 (534)
T ss_pred HHHhhhhhccCCCCc-ceehhHHHHHHHHHHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHHHHhh-CHHHHHHhCHHHH
Confidence 699999999999998 79999999999999999999999999999999999999999999999999 5999999999999
Q ss_pred HHHHHhcCcchhhhcccchhhhcchhHhhhccCCCcccceeehhhhhHhHHHHHHhccchhhhccCCCcccCcccccccC
Q 007652 81 YLFFKKNGKDAWSALGGCVLCITGAEAMFADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMKYPDSANRIFYDSVPD 160 (594)
Q Consensus 81 ~~f~~~~~~~g~~~LG~v~L~iTG~EAlyADlGHF~~~~I~~aw~~~V~P~L~l~Y~GQ~A~l~~~p~~~~npFy~~~P~ 160 (594)
++||.+||+.||.+||+|+||+||+||||||||||||+|||+||+++|||||+|||+||||||++||++.+||||+++|+
T Consensus 193 i~f~~~~~~~~~~~LG~V~L~~TGaEALyADmGHfg~~~Ir~aw~~~V~PaL~LnY~GQgA~ll~~p~~~~npFf~~~P~ 272 (534)
T PF02705_consen 193 IRFFIRNGWIGFFVLGAVFLCVTGAEALYADMGHFGRKPIRIAWFFLVFPALLLNYFGQGALLLSHPEAVSNPFFLLIPE 272 (534)
T ss_pred HHHHHHcCCchhhhcchHHHHHhhHHHHHhhhccccchhhhhhHHHHHHHHHHHHHccHHHHHHcCcchhhhHHHHHhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchHHHHHHHHHHHHHhhhheeechhhHHHHHHHhCCCCceeEeeCCCccCCccccchHHHHHHHHhheeeEEeCCchhH
Q 007652 161 SLFWPVFVLAALAAMIASQAMISATFSCIKQAMALGCFPRLKIIHTSRKRMGQIYIPVINWFLMIMCVVVVSIFQSTTDI 240 (594)
Q Consensus 161 ~~~~p~~ilAtlAaIIASQA~Isg~FSi~~Qa~~Lg~fPr~ki~hTS~~~~GQIYiP~vNw~Lmi~~l~v~~~F~~s~~l 240 (594)
|++||++++||+||||||||+|||+||+++||++||||||+||+|||++.+||||||+|||+||++|++++++||||++|
T Consensus 273 ~~~~p~~ilAtlAtIIASQA~Isg~FSl~~Qai~Lg~~Pr~~I~hTS~~~~GQIYIP~vNw~L~i~~i~vvl~F~~S~~l 352 (534)
T PF02705_consen 273 WLLWPMVILATLATIIASQAVISGAFSLTRQAIQLGYFPRLKIVHTSEKEEGQIYIPEVNWLLMIGVIAVVLGFRSSSNL 352 (534)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEECCcccCCcEechHHHHHHHHHHHhhheEECChHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhchhhhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhHhcccCCccHHHHHHHHHHHHHHHhhHh
Q 007652 241 ANAYGIAEVGVMLVSSTLVTIVMLLIWQTNLLLVLCFPLVFGSVELLYMSAVLSKIAEGGWLPLAFASVFLCVMYIWNYG 320 (594)
Q Consensus 241 ~~AYGiaV~~~m~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~ie~~f~sa~l~Ki~~GGW~pl~ia~~~~~iM~~W~~G 320 (594)
|+|||+||++||++||+|++++++.+||||.+++++++++|+.+|+.||+||+.|++||||+||++|++++++|++|+||
T Consensus 353 a~AYGiAVt~tM~iTT~L~~~v~~~~w~~~~~~~~~~~~~fl~id~~ff~anl~K~~~GGW~pl~ia~~l~~iM~tW~~G 432 (534)
T PF02705_consen 353 AAAYGIAVTGTMLITTILLFLVMRRVWKWPLWLALLFFLFFLVIDLLFFSANLLKFPHGGWFPLLIAAVLFTIMYTWRRG 432 (534)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChHHHHHhcCCCCCcccceeEEEeecCCCCchhHHHHHhhhcCccceEEEEEEEEEecccccCCCce
Q 007652 321 SVLKYRSEVREKISMDFLLDLGSTLGTVRVPGIGLLYNELVQGIPSIFGQFLLSLPAIHSTIVFVCIKYVPVPMVRLEER 400 (594)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~vf~t~~~~~vP~~~~h~~~~~~~lhev~Vfv~i~~~~vP~V~~~eR 400 (594)
+++++++++++++++++++++.++.++.|+||+|+|+|+..+++|+++.|+++||+++||+++|+|++++|+|+||++||
T Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~aVFlt~~~~~vP~~l~h~l~~~~vlhe~~v~l~v~~~~vP~V~~~~R 512 (534)
T PF02705_consen 433 RKLLYEFERENKLPLDDFLELLEDQSIPRVPGTAVFLTRSPDGVPPALLHNLKHNKVLHERVVFLTVKTEPVPRVPPEER 512 (534)
T ss_pred HHHHHHHHHhcCCCHHHHHHhhhhCCCceecceEEEEcCCCccCcHHHHHHHHhCCcccceEEEEEEEEeccCCCCCceE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEecCCCCcEEEEEEEEeecc
Q 007652 401 FLFRRVGPKDYHMFRCVTRYGYKD 424 (594)
Q Consensus 401 ~~v~~~~~~~~~~yr~vvryGY~d 424 (594)
|+++++++ +++|||++||||||
T Consensus 513 ~~v~~l~~--~g~~rv~~ryGf~e 534 (534)
T PF02705_consen 513 YEVERLGP--DGFYRVTLRYGFME 534 (534)
T ss_pred EEEEEecC--CCEEEEEEEecCCC
Confidence 99999996 38999999999998
No 8
>COG3158 Kup K+ transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.8e-149 Score=1202.91 Aligned_cols=497 Identities=35% Similarity=0.620 Sum_probs=471.7
Q ss_pred CCcccccccccCCCCCceehhhHHHHHHHHHhhccccccccccchhhHHHHHHHHHHHhhhhhhcccCcceeeecChHHH
Q 007652 1 MSAVSGLQGEIHGFGESALVIVSIIILVALFSIQRFGTGKVGFMFAPVLALWFFSLGSIGLYNLVKYDISVVRAFNPIYI 80 (594)
Q Consensus 1 LSAveGl~v~~p~l~~~~vv~is~~ILv~LF~~Q~~GT~kvg~~F~Pim~~Wf~~i~~~Giyni~~~~p~Vl~A~nP~y~ 80 (594)
|||||||+++.|.++ ++|+|||++||++||++||+||++||++|||||++||+++|+.|++||.+ ||+||+|+||+||
T Consensus 131 lSAvEGL~iv~p~~~-~~Vvpitl~IL~~LF~iQ~~GT~~Vg~~FGPVm~lWF~~l~~~Gl~~i~~-~p~IL~AiNP~yA 208 (627)
T COG3158 131 LSAVEGLEIVTPALD-PYVVPITLIILVLLFLIQRFGTGRVGKLFGPVMLLWFLALAVLGLINIID-DPEILRAINPYYA 208 (627)
T ss_pred HHHhccccccCcccc-CccHHHHHHHHHHHHHHhcccchhhhhhhccHHHHHHHHHHHHHHHHHhc-CHHHHHHhChHHH
Confidence 699999999999998 79999999999999999999999999999999999999999999999998 9999999999999
Q ss_pred HHHHHhcCcchhhhcccchhhhcchhHhhhccCCCcccceeehhhhhHhHHHHHHhccchhhhccCCCcccCcccccccC
Q 007652 81 YLFFKKNGKDAWSALGGCVLCITGAEAMFADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMKYPDSANRIFYDSVPD 160 (594)
Q Consensus 81 ~~f~~~~~~~g~~~LG~v~L~iTG~EAlyADlGHF~~~~I~~aw~~~V~P~L~l~Y~GQ~A~l~~~p~~~~npFy~~~P~ 160 (594)
++|+.++|..|++.||+||||+||+||||||||||||+|||.||+++|+|||+|||+||||++++||++..||||.++|+
T Consensus 209 i~fl~~~~~~gf~vLGaVfLavTGaEALYADmGHfGr~pI~~AWf~vv~P~L~LNY~GQGA~vL~~p~a~~npFF~~~P~ 288 (627)
T COG3158 209 VHFLLEEGFVGFFVLGAVFLAVTGAEALYADMGHFGRKPIRVAWFFVVLPCLLLNYFGQGALLLSNPEAIGNPFFLLAPD 288 (627)
T ss_pred HHHHHhCCceEEEEeeeeeeeeccHHHHHhhccccCCccHHHHHHHHHHHHHHHHHccccceeccCcccccCcHHHhChh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchHHHHHHHHHHHHHhhhheeechhhHHHHHHHhCCCCceeEeeCCCccCCccccchHHHHHHHHhheeeEEeCCchhH
Q 007652 161 SLFWPVFVLAALAAMIASQAMISATFSCIKQAMALGCFPRLKIIHTSRKRMGQIYIPVINWFLMIMCVVVVSIFQSTTDI 240 (594)
Q Consensus 161 ~~~~p~~ilAtlAaIIASQA~Isg~FSi~~Qa~~Lg~fPr~ki~hTS~~~~GQIYiP~vNw~Lmi~~l~v~~~F~~s~~l 240 (594)
|++||++++||+||||||||+|||+||++|||++||++||+||.|||++..||||||.|||+|++++++++++||+|++|
T Consensus 289 ~aliP~viLAT~ATVIASQAvISGaFSLtrQAi~Lg~lPrm~I~~TSe~~~GQIYiP~VN~~L~~~V~~~vl~F~~S~~L 368 (627)
T COG3158 289 WALIPLVILATAATVIASQAVISGAFSLTRQAIRLGYLPRMRIRHTSETESGQIYIPAVNWLLLVAVVFVVLGFGSSSNL 368 (627)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHhCCCCceEEEecCCcccceEEehHHHHHHHHHHhheeeEecChHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhchhhhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhHhcccCCccHHHHHHHHHHHHHHHhhHh
Q 007652 241 ANAYGIAEVGVMLVSSTLVTIVMLLIWQTNLLLVLCFPLVFGSVELLYMSAVLSKIAEGGWLPLAFASVFLCVMYIWNYG 320 (594)
Q Consensus 241 ~~AYGiaV~~~m~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~ie~~f~sa~l~Ki~~GGW~pl~ia~~~~~iM~~W~~G 320 (594)
|+|||+|||++|++||+|++.+++..|||+.+.+.++.++|+++|..||+||+.|++||||+|+++|++++++|.||++|
T Consensus 369 AaAYGiAVTgtM~iTt~L~~~~~~~~w~w~~~~~~~~~~~f~~id~~Ff~AN~~Ki~~GGw~pllia~~i~~vM~tW~~g 448 (627)
T COG3158 369 AAAYGIAVTGTMVITTILLTVVMRKKWKWRKWLVALILIVFLAIDILFFAANLLKIHDGGWLPLLLAAVIFFVMWTWKRG 448 (627)
T ss_pred HHhhChheeehhHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHhhhhhhccCCChHHHHHHHHHHHHHHhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChHHHHHhcCCCCCcccceeEEEeecCCCCchhHHHHHhhhcCccceEEEEEEEEEecccccCCCce
Q 007652 321 SVLKYRSEVREKISMDFLLDLGSTLGTVRVPGIGLLYNELVQGIPSIFGQFLLSLPAIHSTIVFVCIKYVPVPMVRLEER 400 (594)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~vf~t~~~~~vP~~~~h~~~~~~~lhev~Vfv~i~~~~vP~V~~~eR 400 (594)
+++.+++..++++|+|.+++.+++..+.|+|||++|+|+..+-+|.++.|++|||+++||++||+++++.++|+|+++||
T Consensus 449 ~~~l~~~~~~~~i~l~~fi~~l~~~~p~~v~gTAVfLt~~~~~vP~aLlhnlkhnkvlhe~nv~ltv~t~~~P~v~~~~r 528 (627)
T COG3158 449 RQILFEKTRENGIPLDAFIASLEKHPPVRVPGTAVFLTRDPDVVPRALLHNLKHNKVLHERNVFLTVRTEDVPYVHPTDR 528 (627)
T ss_pred hHHHHHHhhcCCCCHHHHHHHHhhCCCcccCceEEEEcCCCCcCcHHHHHHhhhhheeeeeEEEEEEEecCCCCCCccce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEecCCCCcEEEEEEEEeeccccccChhHHHHHHHHHHHHHHHHhhhhHHhhhccccCccccccccCCCCCCCCCCC
Q 007652 401 FLFRRVGPKDYHMFRCVTRYGYKDVRKEDHHVFEQLLVASLEKFLRKEAQDLALERNLLESDLDSVSVASRDPEASGSYG 480 (594)
Q Consensus 401 ~~v~~~~~~~~~~yr~vvryGY~d~~~~~~~~f~~~lv~~L~~FI~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (594)
++++++++ +++|+.++|||||+|+. ++. .+.... ++-.
T Consensus 529 ~~ve~l~~---~f~rV~l~~Gfme~pnv-p~~------------l~~~~~------~G~~-------------------- 566 (627)
T COG3158 529 VKVEQLSD---DFVRVVLHFGFMETPNV-PRA------------LRLCRK------KGLK-------------------- 566 (627)
T ss_pred eeeeeccC---ceEEEEEEeeccCCCCH-HHH------------HHHHhh------cCce--------------------
Confidence 99999998 69999999999999975 221 211100 0000
Q ss_pred ccccccccccccccccCCCCCcccccccccCCCcCCCCCccHHHHHHHHHHHHhCCcEEEeeecEEEEcCCCChhHHHHH
Q 007652 481 TEELKIPLMHERRFDESGTSASEETTSALPSSVMALDEDPSLEYELSALREAIDSGFTYLLAHGDVRAKKKSFFLKKLVI 560 (594)
Q Consensus 481 ~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~~~~~~~~~~~v~~El~~L~~A~eaGVvYIlG~s~vkar~~Ss~lKk~vI 560 (594)
-| -....|.+|++.++++++|++.+ +..
T Consensus 567 -------------------------------------------f~--------im~tsFfl~re~l~~~~~~g~~~-w~~ 594 (627)
T COG3158 567 -------------------------------------------FD--------IMETSFFLSRESLIASKNSGMPR-WRD 594 (627)
T ss_pred -------------------------------------------ec--------ccceEEEEEeeeeecCCCCCchH-HHH
Confidence 00 02457999999999999999876 554
Q ss_pred HHHHHHHhhhccCCCccccCCCCCeEEeeeEEEC
Q 007652 561 NYFYAFLRRNCRAGAANMSVPHMNILQVGMTYMV 594 (594)
Q Consensus 561 n~~Y~FLRkNcR~~~~~L~IPh~~LlEVGmvy~v 594 (594)
..|..|.||.-++...+++|.+|++|+|-.-||
T Consensus 595 -~lfi~l~r~aa~~~~~F~lp~~rvvElGtqveI 627 (627)
T COG3158 595 -RLFIALARNAASPTDYFKLPPNRVVELGTQVEI 627 (627)
T ss_pred -HHHHHHHHhcCCHHHhhCCCCCcEEEeeeeeeC
Confidence 699999999999999999999999999965553
No 9
>TIGR00911 2A0308 L-type amino acid transporter.
Probab=92.50 E-value=0.5 Score=52.61 Aligned_cols=87 Identities=13% Similarity=0.114 Sum_probs=44.9
Q ss_pred ehhhHHHHHHHHHhhccccccccccc---hhhHHHHHHHHHHHhhhhhhcccCcceeeecChHHHHHHHHhcCcchhh-h
Q 007652 19 LVIVSIIILVALFSIQRFGTGKVGFM---FAPVLALWFFSLGSIGLYNLVKYDISVVRAFNPIYIYLFFKKNGKDAWS-A 94 (594)
Q Consensus 19 vv~is~~ILv~LF~~Q~~GT~kvg~~---F~Pim~~Wf~~i~~~Giyni~~~~p~Vl~A~nP~y~~~f~~~~~~~g~~-~ 94 (594)
...+++++++++..+.-+|....+++ +.-+.++=++.+.+.|++.+.+.++. ..+|...+.-. .++..+|. .
T Consensus 165 ~~~i~~~~i~~~~~ln~~Gvk~~~~~~~i~~~~~l~~l~~~ii~~~~~~~~~~~~---~~~~~~~f~~~-~~~~~~~~~a 240 (501)
T TIGR00911 165 IRLVAVLCVLLLTLVNCLSVKWATRVQDIFTACKLLALLLIIITGWVQLGKGGVE---SLNPKNAFEGT-ETSAGGIVLA 240 (501)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcc---ccCcccccCCC-CCcHHHHHHH
Confidence 34677888888899999997665543 33322222233344555544331211 11222111000 02233444 5
Q ss_pred cccchhhhcchhHhh
Q 007652 95 LGGCVLCITGAEAMF 109 (594)
Q Consensus 95 LG~v~L~iTG~EAly 109 (594)
+..++.+.+|-|+.=
T Consensus 241 ~~~~~~af~G~e~~~ 255 (501)
T TIGR00911 241 FYSGIWAYGGWNYLN 255 (501)
T ss_pred HHHHHHHHHhHHHHh
Confidence 677788889988653
No 10
>COG0531 PotE Amino acid transporters [Amino acid transport and metabolism]
Probab=88.62 E-value=12 Score=40.49 Aligned_cols=179 Identities=16% Similarity=0.125 Sum_probs=100.9
Q ss_pred eehhhHHHHHHHHHhhccccccccccchhhHHHHHHHHHHHhhhhhhcccCcceeeecChHHHHHHHHhcCcchhhhccc
Q 007652 18 ALVIVSIIILVALFSIQRFGTGKVGFMFAPVLALWFFSLGSIGLYNLVKYDISVVRAFNPIYIYLFFKKNGKDAWSALGG 97 (594)
Q Consensus 18 ~vv~is~~ILv~LF~~Q~~GT~kvg~~F~Pim~~Wf~~i~~~Giyni~~~~p~Vl~A~nP~y~~~f~~~~~~~g~~~LG~ 97 (594)
....++.+++++++.++-+|....+++..-..++=++.+..+++..+..++......+++... .......-...++.
T Consensus 133 ~~~~~~~~~~~~~~~ln~~G~~~~~~~~~~~~~~~i~~~i~~~i~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 209 (466)
T COG0531 133 LIILIALALIALLTLLNLRGIKASAKINSIITILKIIILLIFIILGLFAFGFSNGNLFAPFNP---GGGSFGGILAAILL 209 (466)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccccCCCccc---ccchHHHHHHHHHH
Confidence 457789999999999999999988876666555555555555555555433332222221111 00000123445666
Q ss_pred chhhhcchhHh--hh-ccCCCcccceeehhhhhHhHHHHHHhccchhhhccCCC-ccc-----Ccccc---ccc-CcchH
Q 007652 98 CVLCITGAEAM--FA-DLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMKYPD-SAN-----RIFYD---SVP-DSLFW 164 (594)
Q Consensus 98 v~L~iTG~EAl--yA-DlGHF~~~~I~~aw~~~V~P~L~l~Y~GQ~A~l~~~p~-~~~-----npFy~---~~P-~~~~~ 164 (594)
++.+.+|-|+. +| ++=+ .+|.|-.|-..-..-+.++-.+++.+....-|. +.. +|+.. ... .+..+
T Consensus 210 ~~~~f~G~e~~~~~a~E~kn-p~r~ip~aii~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~~~ 288 (466)
T COG0531 210 AFFAFTGFEAIATLAEEVKN-PKRTIPRAIILSLLIVLILYILGALVIVGVLPAGDLAASAPSAPLALAALFGGGNWGAI 288 (466)
T ss_pred HHHHhhcHHHHHHHHHHhcC-ccccccHHHHHHHHHHHHHHHHHHHHHHhCccHHHHhccCCCccHHHHHHHcCccHHHH
Confidence 78899998864 33 2333 555666655544433444433444333333332 111 45443 223 35555
Q ss_pred HHHHHHHHHHHHhhhheeechhhHHHHHHHhCCCCc
Q 007652 165 PVFVLAALAAMIASQAMISATFSCIKQAMALGCFPR 200 (594)
Q Consensus 165 p~~ilAtlAaIIASQA~Isg~FSi~~Qa~~Lg~fPr 200 (594)
-+.+++.++..-+..+.+.+.--+..+.-+-|++|+
T Consensus 289 ~i~~~~~~~~~~~~~~~~~~~sR~~~~~ardg~lP~ 324 (466)
T COG0531 289 IIAILALLSLFGSLLAWILAVSRVLYAMARDGLLPK 324 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccH
Confidence 555555566555556666666667777778899998
No 11
>TIGR00909 2A0306 amino acid transporter.
Probab=84.64 E-value=17 Score=39.33 Aligned_cols=167 Identities=16% Similarity=0.113 Sum_probs=78.5
Q ss_pred hhHHHHHHHHHhhccccccccc---cchhhHHHHHHHHHHHhhhhhhcccCcceeeecChHHHHHHHHhcCcchh-hhcc
Q 007652 21 IVSIIILVALFSIQRFGTGKVG---FMFAPVLALWFFSLGSIGLYNLVKYDISVVRAFNPIYIYLFFKKNGKDAW-SALG 96 (594)
Q Consensus 21 ~is~~ILv~LF~~Q~~GT~kvg---~~F~Pim~~Wf~~i~~~Giyni~~~~p~Vl~A~nP~y~~~f~~~~~~~g~-~~LG 96 (594)
.++++++++...+..+|.+..+ ..++.+.++=++.+.+.|+.+. ++.-+..+.| ++..+| ..+.
T Consensus 135 ~~~i~~~~~~~~l~~~g~~~~~~~~~v~~~~~i~~l~~~~~~~~~~~---~~~~~~~~~~---------~~~~~~~~~~~ 202 (429)
T TIGR00909 135 LPALLIVLFLTYILYLGAKESGKVNDILVVLKVAALLLFAALGAIHF---ASNNYTPFMP---------MGFGGVGAATA 202 (429)
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhhHHHhhC---cHHhcCCCCC---------CcHHHHHHHHH
Confidence 4567777788888888866544 5666655554444444454432 3322222222 122232 2244
Q ss_pred cchhhhcchhHhhh--ccCCCcccceeehhhhhHhHHHHHHhccchhhhccC-C-C---cccCcccc----cccCcchHH
Q 007652 97 GCVLCITGAEAMFA--DLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMKY-P-D---SANRIFYD----SVPDSLFWP 165 (594)
Q Consensus 97 ~v~L~iTG~EAlyA--DlGHF~~~~I~~aw~~~V~P~L~l~Y~GQ~A~l~~~-p-~---~~~npFy~----~~P~~~~~p 165 (594)
..+.+.+|=|+.-. +-=+-.+|.+.+|-..-+.=+. +.|+.-....... | + +.++|+.. ...++.-+-
T Consensus 203 ~~~~af~G~e~~~~~~~E~~~p~r~ip~ai~~~~~~~~-v~Yil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (429)
T TIGR00909 203 LVFFAFIGFEAISTAAEEVKNPERDIPKAIILSLIVVT-LLYVLVAAVILGAVPWRQLAGSTAPLSLVGYDLGQGIGGLI 281 (429)
T ss_pred HHHHHHhhHHHHHhhHHhccCccccccHHHHHHHHHHH-HHHHHHHHHHhcCcCHHHhCCCCcHHHHHHHHhCchHHHHH
Confidence 45677778887643 3334455667666543222222 2244332222211 1 1 12234322 222333333
Q ss_pred HHHHHHHHHHHhhhheeechhhHHHHHHHhCCCCc
Q 007652 166 VFVLAALAAMIASQAMISATFSCIKQAMALGCFPR 200 (594)
Q Consensus 166 ~~ilAtlAaIIASQA~Isg~FSi~~Qa~~Lg~fPr 200 (594)
+.+.+.++..-+..+.+.+.=-+....-+.|.+|+
T Consensus 282 ~~i~~~~~~~~~~~~~~~~~sR~~~~~a~dg~lP~ 316 (429)
T TIGR00909 282 LTAGAVFSIASVMLAGIYGTSRVLFAMSRDGLLPG 316 (429)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcH
Confidence 44444444444333433333334444457899997
No 12
>TIGR03813 put_Glu_GABA_T putative glutamate/gamma-aminobutyrate antiporter. Members of this protein family are putative putative glutamate/gamma-aminobutyrate antiporters. Each member of the seed alignment is found adjacent to a glutamate decarboxylase, which converts glutamate (Glu) to gamma-aminobutyrate (GABA). However, the majority belong to genome contexts with a glutaminase (converts Gln to Glu) as well as the decarboxylase that converts Glu to GABA. The specificity of the transporter remains uncertain.
Probab=82.78 E-value=28 Score=38.55 Aligned_cols=54 Identities=19% Similarity=0.131 Sum_probs=27.7
Q ss_pred chhhhcccchhhhcchhHh--hhccCCCcccceeehhhhhHhHHHHHHhccchhhh
Q 007652 90 DAWSALGGCVLCITGAEAM--FADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYL 143 (594)
Q Consensus 90 ~g~~~LG~v~L~iTG~EAl--yADlGHF~~~~I~~aw~~~V~P~L~l~Y~GQ~A~l 143 (594)
.++...++++.+.+|-|.. +|+==+-.+|.+-.|=..-+.=+.++-.+++-+..
T Consensus 195 ~~~~~~~~~~~af~G~e~~~~~a~E~knP~r~iPrAi~~~~~~~~~~y~l~~~~~~ 250 (474)
T TIGR03813 195 DNVVLAASIFLFYAGMEMNAVHVKDVDNPDKNYPIAILIAALGTVLIFVLGTLAIA 250 (474)
T ss_pred ccHHHHHHHHHHHhchhHhHHHHHhccCcccchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444445566788898853 44444555666665554433333333333333333
No 13
>PRK10655 potE putrescine transporter; Provisional
Probab=82.41 E-value=36 Score=37.17 Aligned_cols=43 Identities=16% Similarity=0.061 Sum_probs=24.8
Q ss_pred hhHHHHHHHHHhhccccccccccc---hhhHHHHHHHHHHHhhhhh
Q 007652 21 IVSIIILVALFSIQRFGTGKVGFM---FAPVLALWFFSLGSIGLYN 63 (594)
Q Consensus 21 ~is~~ILv~LF~~Q~~GT~kvg~~---F~Pim~~Wf~~i~~~Giyn 63 (594)
.++.++++.+..+.-+|++..+++ ..-..++-++.+...|++.
T Consensus 125 ~~~~~~l~~~~~ln~~g~~~~~~i~~i~~~~~l~~l~~~~i~~~~~ 170 (438)
T PRK10655 125 LATIGVLWLCTVANFGGARITGQISSVTVWGVIIPVVGLSIIGWFW 170 (438)
T ss_pred HHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345666677888999997666554 2333333344444555443
No 14
>TIGR00907 2A0304 amino acid permease (GABA permease).
Probab=80.89 E-value=11 Score=41.67 Aligned_cols=24 Identities=21% Similarity=0.477 Sum_probs=17.5
Q ss_pred ccHHHHHHHHHHHHHHHhhHhHHH
Q 007652 300 GWLPLAFASVFLCVMYIWNYGSVL 323 (594)
Q Consensus 300 GW~pl~ia~~~~~iM~~W~~G~~~ 323 (594)
-|.++++++++...+..|....++
T Consensus 454 ny~~~~~~~~~~~~~~~~~~~~r~ 477 (482)
T TIGR00907 454 NYAVVVFAGVLAISLVYWKYKGRK 477 (482)
T ss_pred ChHhHHHHHHHHHHHHHheEecee
Confidence 499999988887777777653333
No 15
>PRK10435 cadB lysine/cadaverine antiporter; Provisional
Probab=79.94 E-value=56 Score=35.86 Aligned_cols=23 Identities=17% Similarity=0.177 Sum_probs=17.2
Q ss_pred hHHHHHHHHHhhccccccccccc
Q 007652 22 VSIIILVALFSIQRFGTGKVGFM 44 (594)
Q Consensus 22 is~~ILv~LF~~Q~~GT~kvg~~ 44 (594)
++++++.++..+..+|+...+.+
T Consensus 124 ~~~~i~~~~~~ln~~gvk~~~~i 146 (435)
T PRK10435 124 ACIAIVWVFTFVNMLGGTWVSRL 146 (435)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHH
Confidence 35566667888999999877664
No 16
>PF13520 AA_permease_2: Amino acid permease; PDB: 3NCY_A 3GI8_C 3GIA_A 3GI9_C 3OB6_A 3L1L_A 3LRC_D 3LRB_B 4DJK_A 4DJI_A ....
Probab=77.13 E-value=11 Score=40.57 Aligned_cols=223 Identities=15% Similarity=0.181 Sum_probs=121.3
Q ss_pred ehhhHHHHHHHHHhhccccccccccc---hhhHHH-HHHHHHHHhhhhhhcccCcce-----eeecChHHHHHHHHhcCc
Q 007652 19 LVIVSIIILVALFSIQRFGTGKVGFM---FAPVLA-LWFFSLGSIGLYNLVKYDISV-----VRAFNPIYIYLFFKKNGK 89 (594)
Q Consensus 19 vv~is~~ILv~LF~~Q~~GT~kvg~~---F~Pim~-~Wf~~i~~~Giyni~~~~p~V-----l~A~nP~y~~~f~~~~~~ 89 (594)
...++.+++++.+.+.-+|....+++ .+=+.+ +-++.+.+.|++...+ +..- ....+|. +.
T Consensus 118 ~~~i~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~i~~~l~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~---------~~ 187 (426)
T PF13520_consen 118 QFLIAIILILLFTLLNLLGIKLSGKIQNILTVIKIVIPLLVLIILGIVSFSF-SGFNSLSFSLSTFFPS---------GW 187 (426)
T ss_dssp HHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTC-CHHH----SHSCSSCS---------SS
T ss_pred heeeeecccccceEeeechhhhhhhhhhhhhhhhhhhhhhhheeEEEeeecc-cccccccccccccCCc---------cc
Confidence 45678888888999999998766644 333333 3445556667665533 1111 1112222 11
Q ss_pred c-hhhhcccchhhhcchhHhhhccCCCcccceeehhhhhHhHHHHHHhccchhhhccCCC---c-ccC------cccccc
Q 007652 90 D-AWSALGGCVLCITGAEAMFADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMKYPD---S-ANR------IFYDSV 158 (594)
Q Consensus 90 ~-g~~~LG~v~L~iTG~EAlyADlGHF~~~~I~~aw~~~V~P~L~l~Y~GQ~A~l~~~p~---~-~~n------pFy~~~ 158 (594)
. -+..++..+.+.+|-|+.=.-.+-.-+|.+..|=..-+.-+.++.-+..-++...-|. + .+| .+++..
T Consensus 188 ~~~~~~~~~~~~~~~G~e~~~~~~~E~k~k~ip~ai~~~~~~~~i~y~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (426)
T PF13520_consen 188 PGFLAGFSVAFFAFSGFEAIASLAEENKNKTIPRAIIISIIIVAIIYILFSIALLGALPDDELANSSNSPSPFAVLASAV 267 (426)
T ss_dssp SHHHHHHHHHGGGGTTTTHHHHGGGGSSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTHCHHHTTTCHHCHHHHHHHHH
T ss_pred cchhhHHHHHHhhcccccccccccccccchhheeecccchhHHHHHHhhhhheeeecccchhhhcccccccccchhhccc
Confidence 1 2555677888899999865555555556666554433333333333333333333222 1 112 223322
Q ss_pred -cCcchHHHHHHHHHHHHHhhhheeechhhHHHHHHHhCCCCceeEeeCCCccCCccccchHHHHHHHHhh-eee--EEe
Q 007652 159 -PDSLFWPVFVLAALAAMIASQAMISATFSCIKQAMALGCFPRLKIIHTSRKRMGQIYIPVINWFLMIMCV-VVV--SIF 234 (594)
Q Consensus 159 -P~~~~~p~~ilAtlAaIIASQA~Isg~FSi~~Qa~~Lg~fPr~ki~hTS~~~~GQIYiP~vNw~Lmi~~l-~v~--~~F 234 (594)
.++..+.+.+.+.++..-+-.+.+.+.--++.+.-+-|.+|+ +..+++| +| .|..-.++...+- +.. ..|
T Consensus 268 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~sR~l~~~a~d~~lP~-~~~~~~k--~~---~P~~a~~~~~~i~~i~~~~~~~ 341 (426)
T PF13520_consen 268 GGSWLAIIVSIAAILSLFGSINAFIFGASRLLYAMARDGVLPK-WFAKVNK--FG---TPYNAIILVAVISSILLLLFLF 341 (426)
T ss_dssp HCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSG-GGGTTSS--SS---SCHHHHHHHHHHHHHHHHHTTT
T ss_pred cccccccccccccccccccccchhhcchhhcccccccccchhh-hhhhccc--cC---CceeeehhhhHHHHHHHHHHHh
Confidence 457778888888877777666666666667777788899994 2333332 22 2555444433332 222 223
Q ss_pred ---CCchhHHhhhhchhhhHHHHHHH
Q 007652 235 ---QSTTDIANAYGIAEVGVMLVSST 257 (594)
Q Consensus 235 ---~~s~~l~~AYGiaV~~~m~iTT~ 257 (594)
++-+.+.+.+.+......+++.+
T Consensus 342 ~~~~~~~~l~~~~~~~~~~~~~~~~~ 367 (426)
T PF13520_consen 342 IPQSSFDILVSLSSVGYLISYILVIL 367 (426)
T ss_dssp SSSSHHHHHHHHHHHHTHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23456777777766666666633
No 17
>TIGR00930 2a30 K-Cl cotransporter.
Probab=76.86 E-value=2e+02 Score=35.66 Aligned_cols=25 Identities=20% Similarity=0.179 Sum_probs=18.3
Q ss_pred ehhhHHHHHHHHHhhcccccccccc
Q 007652 19 LVIVSIIILVALFSIQRFGTGKVGF 43 (594)
Q Consensus 19 vv~is~~ILv~LF~~Q~~GT~kvg~ 43 (594)
+-.++++++++++.+--+|....++
T Consensus 203 ~~iia~i~l~ll~~In~~Gvk~~ak 227 (953)
T TIGR00930 203 IRIYGTVTVVVLLGISFAGMEWENK 227 (953)
T ss_pred chHHHHHHHHHHHHHHHhhHHHHHH
Confidence 4457778888888888889865443
No 18
>PRK15049 L-asparagine permease; Provisional
Probab=75.37 E-value=39 Score=38.02 Aligned_cols=100 Identities=15% Similarity=0.093 Sum_probs=46.6
Q ss_pred hHHHHHHHHHhhcccccccccc---chhhHHHHHHHHHHHhhhhhhcccCcceeeecChHHHHHHHHhcC---cchh---
Q 007652 22 VSIIILVALFSIQRFGTGKVGF---MFAPVLALWFFSLGSIGLYNLVKYDISVVRAFNPIYIYLFFKKNG---KDAW--- 92 (594)
Q Consensus 22 is~~ILv~LF~~Q~~GT~kvg~---~F~Pim~~Wf~~i~~~Giyni~~~~p~Vl~A~nP~y~~~f~~~~~---~~g~--- 92 (594)
++.++++++..+.-+|....+. .+.=+.++=++.+.++|+.-+...+|.-- ++ ..+.++..++ ..||
T Consensus 147 ~~~~~~~l~~~iN~~gvk~~~~i~~~~~~iki~~l~~~ii~~i~~~~~~~~~~~---~~-~~f~~~~~~~~~~p~g~~~~ 222 (499)
T PRK15049 147 FALAALTIVGTMNMIGVKWFAEMEFWFALIKVLAIVTFLVVGTVFLGSGQPLDG---NT-TGFHLITDNGGFFPHGLLPA 222 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCC---CC-cccccccCCCCcccccHHHH
Confidence 4667777788888888766554 34433322233333444433222111000 00 0011111111 1222
Q ss_pred -hhcccchhhhcchhH--hhhccCCCcccceeehhh
Q 007652 93 -SALGGCVLCITGAEA--MFADLGHFSVKAIQIAFT 125 (594)
Q Consensus 93 -~~LG~v~L~iTG~EA--lyADlGHF~~~~I~~aw~ 125 (594)
..+..++.+.+|-|. ..|+==+--+|+|-.|-.
T Consensus 223 ~~~~~~~~faf~G~e~i~~~aeE~knP~r~iPrAi~ 258 (499)
T PRK15049 223 LVLIQGVVFAFASIEMVGTAAGECKDPQTMVPKAIN 258 (499)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHhcChhhHHHHHHH
Confidence 123346778888884 344444556666666653
No 19
>TIGR00906 2A0303 cationic amino acid transport permease.
Probab=74.26 E-value=66 Score=36.95 Aligned_cols=45 Identities=13% Similarity=0.284 Sum_probs=26.8
Q ss_pred ehhhHHHHHHHHHhhcccccccccc---chhhHHHHHHHHHHHhhhhh
Q 007652 19 LVIVSIIILVALFSIQRFGTGKVGF---MFAPVLALWFFSLGSIGLYN 63 (594)
Q Consensus 19 vv~is~~ILv~LF~~Q~~GT~kvg~---~F~Pim~~Wf~~i~~~Giyn 63 (594)
...+++++++++..+--+|+...++ .+.-+.++-++.+.+.|+..
T Consensus 161 ~~~~a~~ii~l~~~ln~~Gik~s~~v~~i~~~iki~~l~~~iv~g~~~ 208 (557)
T TIGR00906 161 PDFFAVCLILLLAVLLSFGVKESAWVNKIFTAINILVLLFVIIAGFTK 208 (557)
T ss_pred chHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHhhhHHHhh
Confidence 3456677777777888899766654 34444444444445555543
No 20
>TIGR03810 arg_ornith_anti arginine/ornithine antiporter. Members of this protein family are the arginine/ornithine antiporter, ArcD. This exchanger of ornithine for arginine occurs in a system with arginine deiminase, ornithine carbamoyltransferase, and carbamate kinase, with together turn arginine to ornithine with the generation of ATP and release of CO2.
Probab=67.86 E-value=1.6e+02 Score=32.61 Aligned_cols=44 Identities=7% Similarity=-0.203 Sum_probs=27.8
Q ss_pred ccCcchHHHHHHHHHHHHHhhhheeechhhHHHHHHHhCCCCce
Q 007652 158 VPDSLFWPVFVLAALAAMIASQAMISATFSCIKQAMALGCFPRL 201 (594)
Q Consensus 158 ~P~~~~~p~~ilAtlAaIIASQA~Isg~FSi~~Qa~~Lg~fPr~ 201 (594)
..++..+.+.+.+.++..-+..+.+.++=-+..+.-+-|.+|+.
T Consensus 274 ~g~~~~~~i~~~~~is~~~~~~~~~~~~sR~~~a~ardg~lP~~ 317 (468)
T TIGR03810 274 VGTWGAVLINIGLIISILGAWLSWTLLPAEIPLLMAKDKLMPKY 317 (468)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHH
Confidence 34455555555555555555566666666666777788999965
No 21
>PF14362 DUF4407: Domain of unknown function (DUF4407)
Probab=64.12 E-value=67 Score=33.69 Aligned_cols=85 Identities=13% Similarity=0.125 Sum_probs=51.8
Q ss_pred HHhhhhchhhhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH----HHHHHHHHhHhcccCCcc---------HHHHH
Q 007652 240 IANAYGIAEVGVMLVSSTLVTIVMLLIWQTNLLLVLCFPLVFGS----VELLYMSAVLSKIAEGGW---------LPLAF 306 (594)
Q Consensus 240 l~~AYGiaV~~~m~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~----ie~~f~sa~l~Ki~~GGW---------~pl~i 306 (594)
-=..||.+|..+.++.++-++..+..+.+.+.+.++++.++++. +|-..+|+.-.+-..+.. +-+++
T Consensus 14 k~~~~G~~vl~ta~la~~s~~~a~~~~~~~~~~~ai~~glvwgl~I~~lDR~ivss~~~~~~~~~~~~~~~~R~~lAvli 93 (301)
T PF14362_consen 14 KYAGIGAAVLFTALLAGLSGGYALYTVFGGPVWAAIPFGLVWGLVIFNLDRFIVSSIRKSDGSRKRLLQALPRLLLAVLI 93 (301)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHH
Confidence 34578999999999999988888888888876666666655554 555555543222221112 23344
Q ss_pred HHHHHHHHHHhhHhHHHH
Q 007652 307 ASVFLCVMYIWNYGSVLK 324 (594)
Q Consensus 307 a~~~~~iM~~W~~G~~~~ 324 (594)
|.++...+..+-+..+..
T Consensus 94 aivIs~pl~l~iF~~eI~ 111 (301)
T PF14362_consen 94 AIVISEPLELKIFEKEID 111 (301)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 444444555555555444
No 22
>TIGR00908 2A0305 ethanolamine permease. The three genes used as the seed for this model (from Burkholderia pseudomallei, Pseudomonas aeruginosa and Clostridium acetobutylicum are all adjacent to genes for the catabolism of ethanolamine. Most if not all of the hits to this model have a similar arrangement of genes. This group is a member of the Amino Acid-Polyamine-Organocation (APC) Superfamily.
Probab=61.02 E-value=1.1e+02 Score=33.50 Aligned_cols=24 Identities=13% Similarity=0.505 Sum_probs=17.1
Q ss_pred hhHHHHHHHHHhhccccccccccc
Q 007652 21 IVSIIILVALFSIQRFGTGKVGFM 44 (594)
Q Consensus 21 ~is~~ILv~LF~~Q~~GT~kvg~~ 44 (594)
.+++++++++..+.-+|++..+++
T Consensus 123 ~~~~~~~~~~~~ln~~g~~~~~~i 146 (442)
T TIGR00908 123 LAALVFYIVFIGINILGVGEAAKL 146 (442)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhH
Confidence 455666667778888888777664
No 23
>TIGR00910 2A0307_GadC glutamate:gamma-aminobutyrate antiporter. Lowered cutoffs from 1000/500 to 800/300, promoted from subfamily to equivalog, and put into a Genome Property DHH 9/1/2009
Probab=60.98 E-value=1.3e+02 Score=34.10 Aligned_cols=52 Identities=13% Similarity=0.137 Sum_probs=28.3
Q ss_pred hhhhcccchhhhcchhHh--hhccCCCcccceeehhhhhHhHHHHHHhccchhh
Q 007652 91 AWSALGGCVLCITGAEAM--FADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAY 142 (594)
Q Consensus 91 g~~~LG~v~L~iTG~EAl--yADlGHF~~~~I~~aw~~~V~P~L~l~Y~GQ~A~ 142 (594)
++..+-+++.+.+|-|+. .|+==+-.+|.+-.|=...+.-+.++.++|--++
T Consensus 196 ~~~~~~~~~faf~G~E~~a~~a~E~knP~r~~PrAi~~~~i~~~~l~~l~~~~i 249 (507)
T TIGR00910 196 TLVVFVAFIGAYMGVEASASHINELENPGRDYPLAMILLMIAAICLDAIGGFSI 249 (507)
T ss_pred HHHHHHHHHHHHhcHHHHHHHHHHccCCcccccHHHHHHHHHHHHHHHHHHHHH
Confidence 344444566778999875 5554455566665555443333444444443333
No 24
>PRK11357 frlA putative fructoselysine transporter; Provisional
Probab=60.70 E-value=2.1e+02 Score=31.36 Aligned_cols=45 Identities=7% Similarity=0.141 Sum_probs=26.5
Q ss_pred hhhHHHHHHHHHhhcccccc---ccccchhhHHHHHHHHHHHhhhhhh
Q 007652 20 VIVSIIILVALFSIQRFGTG---KVGFMFAPVLALWFFSLGSIGLYNL 64 (594)
Q Consensus 20 v~is~~ILv~LF~~Q~~GT~---kvg~~F~Pim~~Wf~~i~~~Giyni 64 (594)
..+++++++++..+.-+|.+ |+...+.=+.++=++.+.++|++..
T Consensus 128 ~~~~~~~~~~~~~ln~~gv~~~~~v~~~~~~~~~~~l~~~ii~g~~~~ 175 (445)
T PRK11357 128 KFIAAGLIIAFMLLHLRSVEGGAAFQTLITIAKIIPFTIVIGLGIFWF 175 (445)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 34566677777788889875 4444444334444445555666543
No 25
>PRK10238 aromatic amino acid transporter; Provisional
Probab=59.96 E-value=1.2e+02 Score=33.74 Aligned_cols=113 Identities=17% Similarity=0.131 Sum_probs=53.9
Q ss_pred hHHHHHHHHHhhcccccccccc---chhhHHHHHHHHHHHhhhhhhccc--Ccc-eeeecChHHHHHHHHhcCcchh-hh
Q 007652 22 VSIIILVALFSIQRFGTGKVGF---MFAPVLALWFFSLGSIGLYNLVKY--DIS-VVRAFNPIYIYLFFKKNGKDAW-SA 94 (594)
Q Consensus 22 is~~ILv~LF~~Q~~GT~kvg~---~F~Pim~~Wf~~i~~~Giyni~~~--~p~-Vl~A~nP~y~~~f~~~~~~~g~-~~ 94 (594)
.+++++++++.+.-+|+...|. .+.-+-++-++.+-++|+.-+... +|. .+.-+.+. .-+..++..|+ ..
T Consensus 129 ~~~i~~~~~~~lN~~gv~~~~~~~~~~~~iki~~i~~~ii~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~~~ 205 (456)
T PRK10238 129 SAAVFFVVINAINLTNVKVFGEMEFWFAIIKVIAVVAMIIFGGWLLFSGNGGPQATVSNLWDQ---GGFLPHGFTGLVMM 205 (456)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCccccccCCC---CCCccccHHHHHHH
Confidence 3555566777888888766554 233333333333333344332221 121 11111000 00011222222 23
Q ss_pred cccchhhhcchhH--hhhccCCCcccceeehhhhhHhHHHHHHhcc
Q 007652 95 LGGCVLCITGAEA--MFADLGHFSVKAIQIAFTLVVFPCLLLAYMG 138 (594)
Q Consensus 95 LG~v~L~iTG~EA--lyADlGHF~~~~I~~aw~~~V~P~L~l~Y~G 138 (594)
++..+.+.+|-|+ ..|+=-+=.+|++-.|=.. +.-.+.+.|++
T Consensus 206 ~~~~~~af~G~e~~~~~aeE~knP~r~iPrAi~~-~~~~i~~~y~~ 250 (456)
T PRK10238 206 MAIIMFSFGGLELVGITAAEADNPEQSIPKATNQ-VIYRILIFYIG 250 (456)
T ss_pred HHHHHHHhcCHHHHHHHHHhhcChhhHHHHHHHH-HHHHHHHHHHH
Confidence 5567788889987 4555556667777777543 33444455654
No 26
>PRK10249 phenylalanine transporter; Provisional
Probab=58.11 E-value=1.5e+02 Score=32.98 Aligned_cols=102 Identities=16% Similarity=0.140 Sum_probs=53.6
Q ss_pred hHHHHHHHHHhhccccccccccc---hhhHHHHHHHHHHHhhhhhhcccCcceeeecChHHHHHH--HHhcCcch-hhhc
Q 007652 22 VSIIILVALFSIQRFGTGKVGFM---FAPVLALWFFSLGSIGLYNLVKYDISVVRAFNPIYIYLF--FKKNGKDA-WSAL 95 (594)
Q Consensus 22 is~~ILv~LF~~Q~~GT~kvg~~---F~Pim~~Wf~~i~~~Giyni~~~~p~Vl~A~nP~y~~~f--~~~~~~~g-~~~L 95 (594)
++.++++++..+.-+|....|.+ ++=+.++..+.+.++|+.-+...++.- ..++.+..+. +..+|..| +..+
T Consensus 138 ~~~~~~~l~~~lN~~gv~~~~~i~~~~~~ikv~~i~~~i~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~ 215 (458)
T PRK10249 138 WAAAFFIIINAVNLVNVRLYGETEFWFALIKVLAIIGMIGFGLWLLFSGHGGE--KASIDNLWRYGGFFATGWNGLILSL 215 (458)
T ss_pred HHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCC--CCChhhccCCCCCCCCcHHHHHHHH
Confidence 45666777778888888765542 333344455555556665443322210 1111111000 01123333 3456
Q ss_pred ccchhhhcchhHh--hhccCCCcccceeehhh
Q 007652 96 GGCVLCITGAEAM--FADLGHFSVKAIQIAFT 125 (594)
Q Consensus 96 G~v~L~iTG~EAl--yADlGHF~~~~I~~aw~ 125 (594)
..++.+.+|-|+. .|+=-+-.+|.|-.|=.
T Consensus 216 ~~~~~af~G~e~~~~~a~E~~~P~k~iPrai~ 247 (458)
T PRK10249 216 AVIMFSFGGLELIGITAAEARDPEKSIPKAVN 247 (458)
T ss_pred HHHHHHHcCHHHHHHHHHHhcCHhhHHHHHHH
Confidence 6667888899965 66666667777665543
No 27
>PRK11021 putative transporter; Provisional
Probab=58.02 E-value=2.7e+02 Score=30.11 Aligned_cols=98 Identities=14% Similarity=0.167 Sum_probs=48.7
Q ss_pred ehhhHHHHHHHHHhhccccccccccchhhHHHHHHHHHHHhhhhhhc-ccCcceeeecChHHHHHHHHhcCcchh-hhcc
Q 007652 19 LVIVSIIILVALFSIQRFGTGKVGFMFAPVLALWFFSLGSIGLYNLV-KYDISVVRAFNPIYIYLFFKKNGKDAW-SALG 96 (594)
Q Consensus 19 vv~is~~ILv~LF~~Q~~GT~kvg~~F~Pim~~Wf~~i~~~Giyni~-~~~p~Vl~A~nP~y~~~f~~~~~~~g~-~~LG 96 (594)
...+++++++++..+.-+|.+..+++-.=+. . +.+..+++.-.. +.+++-+ .+++ +..++..++ ..+.
T Consensus 115 ~~~~~~~~~~~~~~ln~~Gv~~~~~~~~~~~--~-~~~~i~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~~~~~~ 184 (410)
T PRK11021 115 LLLAELLTLALLWLLNLRGASSSANLQTVIA--L-LIVALVVAIWWAGDIKPADI-PFPA------PGSIEWSGLFAALG 184 (410)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH--H-HHHHHHHHHHHHcCCchhcC-CCCC------CCCccHHHHHHHHH
Confidence 3567788888889999999888776443211 1 112222222111 1122211 1110 011122232 2344
Q ss_pred cchhhhcchhHh--hhccCCCcccceeehhhh
Q 007652 97 GCVLCITGAEAM--FADLGHFSVKAIQIAFTL 126 (594)
Q Consensus 97 ~v~L~iTG~EAl--yADlGHF~~~~I~~aw~~ 126 (594)
..+.+.+|-|+. +|+==+-.+|.+..|=..
T Consensus 185 ~~~~af~G~e~~~~~a~E~k~P~k~iPrAi~~ 216 (410)
T PRK11021 185 VMFWCFVGIEAFAHLASEFKNPERDFPRALMI 216 (410)
T ss_pred HHHHHHhcHHHHHhhHHhccCccccccHHHHH
Confidence 456778888864 444445566777666544
No 28
>TIGR00905 2A0302 transporter, basic amino acid/polyamine antiporter (APA) family. This family includes several families of antiporters that, rather commonly, are encoded next to decarboxylases that convert one of the antiporter substrates into the other. This arrangement allows a cycle that can remove proteins from the cytoplasm and thereby protect against acidic conditions.
Probab=57.17 E-value=1.1e+02 Score=33.84 Aligned_cols=25 Identities=12% Similarity=0.260 Sum_probs=17.4
Q ss_pred hhhHHHHHHHHHhhccccccccccc
Q 007652 20 VIVSIIILVALFSIQRFGTGKVGFM 44 (594)
Q Consensus 20 v~is~~ILv~LF~~Q~~GT~kvg~~ 44 (594)
..+++++++++..+..+|+...+++
T Consensus 130 ~~~~~~~~~~~~~ln~~Gi~~~~~i 154 (473)
T TIGR00905 130 ILGASVLLWVFTFLVLRGVRQAAFI 154 (473)
T ss_pred HHHHHHHHHHHHHHHHhCHHHHHHH
Confidence 3456666667788999999766543
No 29
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=56.85 E-value=45 Score=33.25 Aligned_cols=19 Identities=5% Similarity=0.382 Sum_probs=15.9
Q ss_pred ccHHHHHHHHHHHHHHHhh
Q 007652 300 GWLPLAFASVFLCVMYIWN 318 (594)
Q Consensus 300 GW~pl~ia~~~~~iM~~W~ 318 (594)
+|+-+++|++.+.+-+-|+
T Consensus 180 ~~~~iiig~i~~~~~~~lk 198 (206)
T PF06570_consen 180 PWVYIIIGVIAFALRFYLK 198 (206)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 8999999999888876654
No 30
>PRK10746 putative transport protein YifK; Provisional
Probab=53.66 E-value=3.1e+02 Score=30.55 Aligned_cols=38 Identities=21% Similarity=0.186 Sum_probs=22.6
Q ss_pred cCcchh-hhcccchhhhcchhHh--hhccCCCcccceeehh
Q 007652 87 NGKDAW-SALGGCVLCITGAEAM--FADLGHFSVKAIQIAF 124 (594)
Q Consensus 87 ~~~~g~-~~LG~v~L~iTG~EAl--yADlGHF~~~~I~~aw 124 (594)
+|..|+ ..+..++.+..|-|.. .|+==+-.+|+|-.|=
T Consensus 197 ~g~~g~~~~~~~~~faf~G~e~v~~~a~E~knP~k~iP~Ai 237 (461)
T PRK10746 197 GGWKGFLTALCIVVASYQGVELIGITAGEAKNPQVTLRSAV 237 (461)
T ss_pred ccHHHHHHHHHHHHHHhcCHHHHHHHHHHhcChhhHHHHHH
Confidence 334444 5666777778888853 3443455666666664
No 31
>KOG3145 consensus Cystine transporter Cystinosin [Amino acid transport and metabolism]
Probab=53.13 E-value=15 Score=39.37 Aligned_cols=88 Identities=22% Similarity=0.493 Sum_probs=54.6
Q ss_pred HHHHHHHHHhhcccccccccc--chhhHHHHHHHHHHHhhhh---------------------hhcccCcceeeecChHH
Q 007652 23 SIIILVALFSIQRFGTGKVGF--MFAPVLALWFFSLGSIGLY---------------------NLVKYDISVVRAFNPIY 79 (594)
Q Consensus 23 s~~ILv~LF~~Q~~GT~kvg~--~F~Pim~~Wf~~i~~~Giy---------------------ni~~~~p~Vl~A~nP~y 79 (594)
+|+.+.=.|+-| +|-.++|+ +.|-+.+.|.++-...++- -++||-|+.
T Consensus 213 t~Iti~Qc~~ye-R~~q~vs~~ialgil~i~~~f~~~~~~va~~~~~~wL~f~~~~syiKl~mTliKYiPQa-------- 283 (372)
T KOG3145|consen 213 TVITILQCFFYE-RGWQRVSKGIALGILAIFWLFAVVFMYVAYWYVIRWLAFLNNLSYIKLAMTLIKYIPQA-------- 283 (372)
T ss_pred HHHHHHHHHhhh-hcccccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHH--------
Confidence 444444444444 46677777 6777777776655444432 123333322
Q ss_pred HHHHHHhcCcchhhhcccchhhhcchhH-----------------hhhccCCCccccee
Q 007652 80 IYLFFKKNGKDAWSALGGCVLCITGAEA-----------------MFADLGHFSVKAIQ 121 (594)
Q Consensus 80 ~~~f~~~~~~~g~~~LG~v~L~iTG~EA-----------------lyADlGHF~~~~I~ 121 (594)
..=+.|...+|| +.|+|+|=+|||-| .|+|+|-||-.-+.
T Consensus 284 -~mN~tRKSt~gw-sIgnIlLDfTGG~~slLQMilQ~~N~~sw~~f~gnp~KfGLg~vS 340 (372)
T KOG3145|consen 284 -YMNFTRKSTVGW-SIGNILLDFTGGTASLLQMILQSSNDNSWDTFYGNPGKFGLGLVS 340 (372)
T ss_pred -hhcceecccccc-ccccEEEEecccHHHHHHHHHHHhccccHHHHhcCchhhhhhhHH
Confidence 112345556888 78999999999975 68999999865543
No 32
>PRK11387 S-methylmethionine transporter; Provisional
Probab=51.60 E-value=2.3e+02 Score=31.40 Aligned_cols=32 Identities=19% Similarity=0.241 Sum_probs=17.7
Q ss_pred hcccchhhhcchhHh--hhccCCCcccceeehhh
Q 007652 94 ALGGCVLCITGAEAM--FADLGHFSVKAIQIAFT 125 (594)
Q Consensus 94 ~LG~v~L~iTG~EAl--yADlGHF~~~~I~~aw~ 125 (594)
.+..++.+.+|-|.. .|+==+-.+|.|-.|-.
T Consensus 211 ~~~~~~faf~G~e~~~~~a~E~knP~r~iPrAi~ 244 (471)
T PRK11387 211 TMVAVNFAFSGTELIGIAAGETENPAKVIPVAIR 244 (471)
T ss_pred HHHHHHHHHcCHHHHHHHHHHhcChhhHHHHHHH
Confidence 334456777887753 33333455666655543
No 33
>COG4059 MtrE Tetrahydromethanopterin S-methyltransferase, subunit E [Coenzyme metabolism]
Probab=50.95 E-value=15 Score=37.78 Aligned_cols=39 Identities=21% Similarity=0.637 Sum_probs=30.7
Q ss_pred HHHHHhHhccc------CCccHHHHHHHHHHHHHHHhhHhHHHHH
Q 007652 287 LYMSAVLSKIA------EGGWLPLAFASVFLCVMYIWNYGSVLKY 325 (594)
Q Consensus 287 ~f~sa~l~Ki~------~GGW~pl~ia~~~~~iM~~W~~G~~~~~ 325 (594)
+|||+-..-+. +|||+.++.+.++..+..+|++--+.+.
T Consensus 243 VFl~~W~~~~~d~~~~i~~G~isiv~Gliiv~iLii~N~kvEv~A 287 (304)
T COG4059 243 VFLSSWVTTVFDPAVSIQGGWISIVAGLIIVLILIIWNRKVEVKA 287 (304)
T ss_pred hhhhhhhhhhcCcccccccchhhhHHHHHHHHHHHHhcchhhhhh
Confidence 45555555444 8999999999999999999998666553
No 34
>KOG3643 consensus GABA receptor [Signal transduction mechanisms]
Probab=44.91 E-value=18 Score=40.61 Aligned_cols=91 Identities=22% Similarity=0.364 Sum_probs=59.3
Q ss_pred HhCCCCceeEeeCCCccCC----ccccchHHHHHHHHhheeeEEeCCchhHHhhhhchhhhHHHHHHHHHHHHHH-----
Q 007652 194 ALGCFPRLKIIHTSRKRMG----QIYIPVINWFLMIMCVVVVSIFQSTTDIANAYGIAEVGVMLVSSTLVTIVML----- 264 (594)
Q Consensus 194 ~Lg~fPr~ki~hTS~~~~G----QIYiP~vNw~Lmi~~l~v~~~F~~s~~l~~AYGiaV~~~m~iTT~L~~~v~~----- 264 (594)
+.|-.||+-+...=++..| |+|+|.+= +..+-=|..-=|-++-.+=-.+++|+|..+||++...=.-
T Consensus 225 sTG~Y~RL~l~F~l~Rnigf~ilQ~y~PS~L----iVilSWVSFWin~~a~pARv~lGITTVLTMTTl~t~~n~slPrvS 300 (459)
T KOG3643|consen 225 STGNYSRLSLSFQLRRNIGFYILQTYIPSTL----IVILSWVSFWINRDASPARVALGITTVLTMTTLMTSTNESLPRVS 300 (459)
T ss_pred ccccceeEEEEEEEEeeccEEEEeeecchhh----hhHHhHhHhhhccccchhheeeceehHHhHHHHHhhhhccCCCcc
Confidence 3789999999999888888 99999862 1111111222355556666889999999999998765221
Q ss_pred HHHhhhhHHHHHHHHHHHH-HHHHH
Q 007652 265 LIWQTNLLLVLCFPLVFGS-VELLY 288 (594)
Q Consensus 265 ~~w~~~~~~~~~~~~~f~~-ie~~f 288 (594)
.+.-.-+++...|+.+|++ +|-++
T Consensus 301 YVKAiDiYL~vCFvfVF~sLLEYA~ 325 (459)
T KOG3643|consen 301 YVKAIDVYLGVCFVFVFLSLLEYAA 325 (459)
T ss_pred ceeeehhhhhHHHHHHHHHHHHHHH
Confidence 2333445556666666665 45443
No 35
>PRK10644 arginine:agmatin antiporter; Provisional
Probab=44.06 E-value=1.5e+02 Score=32.62 Aligned_cols=24 Identities=13% Similarity=0.276 Sum_probs=16.5
Q ss_pred hhHHHHHHHHHhhccccccccccc
Q 007652 21 IVSIIILVALFSIQRFGTGKVGFM 44 (594)
Q Consensus 21 ~is~~ILv~LF~~Q~~GT~kvg~~ 44 (594)
.+++++++++..+.-+|++..+++
T Consensus 127 ~~~~~~~~~~~~ln~~gvk~~~~i 150 (445)
T PRK10644 127 ITCVVVLWIFVLLNIVGPKMITRV 150 (445)
T ss_pred HHHHHHHHHHHHHHHhchHHHHHH
Confidence 345666667778888898766543
No 36
>PRK11049 D-alanine/D-serine/glycine permease; Provisional
Probab=42.84 E-value=5e+02 Score=28.83 Aligned_cols=107 Identities=13% Similarity=0.053 Sum_probs=48.6
Q ss_pred hcccchhhhcchhHh--hhccCCCcccceeehhhhhHhHHHHHHhccchhhhc--cCCCc---ccCcccccc----cCcc
Q 007652 94 ALGGCVLCITGAEAM--FADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLM--KYPDS---ANRIFYDSV----PDSL 162 (594)
Q Consensus 94 ~LG~v~L~iTG~EAl--yADlGHF~~~~I~~aw~~~V~P~L~l~Y~GQ~A~l~--~~p~~---~~npFy~~~----P~~~ 162 (594)
.+..++.+.+|-|+. .|.==+-.+|+|..|-.. ..-...+-|.-....+. ..+++ .++||-... -++.
T Consensus 216 ~~~~~~~af~G~e~~~~~a~E~knP~r~iPrai~~-~~~~~~~~y~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~ 294 (469)
T PRK11049 216 GFQIAVFAFVGIELVGTTAAETKDPEKSLPRAINS-IPIRIIMFYVFALIVIMSVTPWSSVVPDKSPFVELFVLVGLPAA 294 (469)
T ss_pred HHHHHHHHHhcHHHHHHHHHHhcCHhhHHHHHHHH-HHHHHHHHHHHHHHHHeeecCccccCccCCcHHHHHHHcCChhH
Confidence 344456777888864 344345566666666532 22233344443333222 12222 235553321 1122
Q ss_pred hHHHHHHHHHHHHHhhhheeechhhHHHHHHHhCCCCce
Q 007652 163 FWPVFVLAALAAMIASQAMISATFSCIKQAMALGCFPRL 201 (594)
Q Consensus 163 ~~p~~ilAtlAaIIASQA~Isg~FSi~~Qa~~Lg~fPr~ 201 (594)
..-+.+++.++.+-+..+.+.+.=-+....-+-|.+|+.
T Consensus 295 ~~~~~~~~~~s~~~~~~~~~~~~sR~l~a~ardg~lP~~ 333 (469)
T PRK11049 295 ASVINFVVLTSAASSANSGVFSTSRMLFGLAQEGVAPKA 333 (469)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHH
Confidence 222222233333333334444444455555578999964
No 37
>TIGR00913 2A0310 amino acid permease (yeast).
Probab=40.47 E-value=3.3e+02 Score=30.13 Aligned_cols=29 Identities=21% Similarity=0.130 Sum_probs=17.5
Q ss_pred cchhhhcchhHh--hhccCCCcccceeehhh
Q 007652 97 GCVLCITGAEAM--FADLGHFSVKAIQIAFT 125 (594)
Q Consensus 97 ~v~L~iTG~EAl--yADlGHF~~~~I~~aw~ 125 (594)
..+.+.+|-|+. .|+==+-.+|.|-.|=.
T Consensus 205 ~~~~af~G~e~~~~~a~E~knP~r~iPrai~ 235 (478)
T TIGR00913 205 TAAFSFGGTELVALTAGEAANPRKSIPRAAK 235 (478)
T ss_pred HHHhhhccHHHHHHHHHhhcChhhHHHHHHH
Confidence 345677888853 45555566666666543
No 38
>TIGR01773 GABAperm gamma-aminobutyrate permease. GabP is highly homologous to amino acid permeases from B. subtilis, E. coli, as well as to other members of the amino acid permease family (pfam00324). A member of the APC (amine-polyamine-choline) transporter superfamily, GABA permease possesses a "consensus amphiphatic region" (CAR) found to be evolutionarily conserved within this transport family. This amphiphatic region is located between helix 8 and cytoplasmic loop 8-9, forming a potential channel domain and suggested to play a significant role in ligand recognition and translocation. Unique to GABA permeases, a conserved cysteine residue (CYS-300, E.coli) located at the beginning of the amphiphatic domain, has been determined to be critical for catalytic specificity.
Probab=37.33 E-value=5.9e+02 Score=27.91 Aligned_cols=101 Identities=16% Similarity=0.125 Sum_probs=47.2
Q ss_pred hhHHHHHHHHHhhccccccccccchhh---HHHHHHHHHHHhhhhhhcccCcce----eeecChHHHHHHHHhcCcch-h
Q 007652 21 IVSIIILVALFSIQRFGTGKVGFMFAP---VLALWFFSLGSIGLYNLVKYDISV----VRAFNPIYIYLFFKKNGKDA-W 92 (594)
Q Consensus 21 ~is~~ILv~LF~~Q~~GT~kvg~~F~P---im~~Wf~~i~~~Giyni~~~~p~V----l~A~nP~y~~~f~~~~~~~g-~ 92 (594)
.+++++++++..+.-+|+...+.+--. +.++-++.+.++|+..+..++|.. +.-+.+.-. +..++..+ +
T Consensus 128 ~~~~~~~~~~~~~n~~gv~~~~~~~~~~~~~ki~~l~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~g~~~~~ 204 (452)
T TIGR01773 128 LFSLILTIVLTLTNLYSVKSYGEFEFWFALIKVIAIIAFIILGAVAIFGFAPGSEVSGFSNLTGKGG---FFPNGIGAVL 204 (452)
T ss_pred HHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCccccccCCCC---cCcccHHHHH
Confidence 456666666777888898777655433 223333333444554433323321 111111000 00112111 2
Q ss_pred hhcccchhhhcchhHh--hhccCCCcccceeehh
Q 007652 93 SALGGCVLCITGAEAM--FADLGHFSVKAIQIAF 124 (594)
Q Consensus 93 ~~LG~v~L~iTG~EAl--yADlGHF~~~~I~~aw 124 (594)
..+...+.+.+|-|+. .|+-=+-.+|.|..|-
T Consensus 205 ~a~~~~~~af~G~e~~~~~a~E~k~P~r~iPrAi 238 (452)
T TIGR01773 205 LAILVTMFSFMGTEIVTIAAAESSNPIKSITRAT 238 (452)
T ss_pred HHHHHHHHHhccHHHHhHHHHhhcChhhHHHHHH
Confidence 2344566777888864 3333344455666664
No 39
>PRK10580 proY putative proline-specific permease; Provisional
Probab=36.69 E-value=4.4e+02 Score=29.04 Aligned_cols=98 Identities=14% Similarity=0.114 Sum_probs=47.7
Q ss_pred HHHHHHHHHhhcccccccccc---chhhHHHHHHHHHHHhhhhhhc-c-cCcceeeecChHHHHHHHH-----hcCcchh
Q 007652 23 SIIILVALFSIQRFGTGKVGF---MFAPVLALWFFSLGSIGLYNLV-K-YDISVVRAFNPIYIYLFFK-----KNGKDAW 92 (594)
Q Consensus 23 s~~ILv~LF~~Q~~GT~kvg~---~F~Pim~~Wf~~i~~~Giyni~-~-~~p~Vl~A~nP~y~~~f~~-----~~~~~g~ 92 (594)
.++++++++.++-+|+...+. .+.-+.++-++.+.++|+.-+. . .++. +|...-..+. .++..|+
T Consensus 127 ~~~~~~l~~~ln~~gv~~~~~~~~~~~~~~~~~l~~~ii~~~~i~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~~~~ 201 (457)
T PRK10580 127 VLSVVLIICAVNLMSVKVFGELEFWFSFFKVATIIIMIVAGIGIIIWGIGNGG-----QPTGIHNLWSNGGFFSNGWLGM 201 (457)
T ss_pred HHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCC-----CCCCccccCCCCCCCCcchHHH
Confidence 445566678889899765554 4455444444444444432111 0 0111 1110000011 1222222
Q ss_pred -hhcccchhhhcchhHh--hhccCCCcccceeehhh
Q 007652 93 -SALGGCVLCITGAEAM--FADLGHFSVKAIQIAFT 125 (594)
Q Consensus 93 -~~LG~v~L~iTG~EAl--yADlGHF~~~~I~~aw~ 125 (594)
..+..++.+.+|-|+. .|.=-+-.+|+|..|=.
T Consensus 202 ~~~~~~~~fsf~G~e~~~~~a~E~knP~k~iPrAi~ 237 (457)
T PRK10580 202 VMSLQMVMFAYGGIEIIGITAGEAKDPEKSIPRAIN 237 (457)
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHhcChhhHHHHHHH
Confidence 3455667888898875 34444566666666644
No 40
>KOG4742 consensus Predicted chitinase [General function prediction only]
Probab=35.11 E-value=17 Score=38.56 Aligned_cols=33 Identities=18% Similarity=0.310 Sum_probs=24.7
Q ss_pred cCCCcccceeehhhhhHhHHHHHHhccch-----hhhccCCCccc-Cc
Q 007652 112 LGHFSVKAIQIAFTLVVFPCLLLAYMGQA-----AYLMKYPDSAN-RI 153 (594)
Q Consensus 112 lGHF~~~~I~~aw~~~V~P~L~l~Y~GQ~-----A~l~~~p~~~~-np 153 (594)
=+++||.+||++|-. ..||+ .=||+|||-+. ||
T Consensus 172 k~Y~GRG~iQlsWNy---------NYG~ag~alg~dLL~~Pe~V~~np 210 (286)
T KOG4742|consen 172 KSYYGRGPIQLSWNY---------NYGAAGKALGLDLLRNPELVAMNP 210 (286)
T ss_pred CcccccCcccccccc---------cccHhHhhcCchhhcCcchhccCc
Confidence 369999999999988 33444 34788999766 44
No 41
>TIGR03428 ureacarb_perm permease, urea carboxylase system. A number of bacteria obtain nitrogen by biotin- and ATP-dependent urea degradation system distinct from urease. The two characterized proteins of this system are the enzymes urea carboxylase and allophanate hydrolase, but other, uncharacterized proteins co-occur as genes encoded nearby in multiple organisms. This family includes predicted permeases of the amino acid permease family, likely to transport either urea or a compound from which urea is derived. It is found so far only Actinobacteria, whereas a number of other species with the urea carboxylase have an adjacent ABC transporter operon.
Probab=27.77 E-value=8.7e+02 Score=26.93 Aligned_cols=25 Identities=20% Similarity=0.236 Sum_probs=17.9
Q ss_pred ehhhHHHHHHHHHhhcccccccccc
Q 007652 19 LVIVSIIILVALFSIQRFGTGKVGF 43 (594)
Q Consensus 19 vv~is~~ILv~LF~~Q~~GT~kvg~ 43 (594)
...++.++++++..+.-+|+...++
T Consensus 144 ~~~~~~~~~~~~~~in~~g~k~~~~ 168 (475)
T TIGR03428 144 AVLLGSVLLVLTTVINCIGVEWMSR 168 (475)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHH
Confidence 3556667777788888899876554
No 42
>PF02508 Rnf-Nqr: Rnf-Nqr subunit, membrane protein; InterPro: IPR003667 The rnf genes of Rhodobacter capsulatus, essential for nitrogen fixation, are thought to encode a system for electron transport to nitrogenase. The rnfABCDGEH operon comprises seven genes that show similarities in gene arrangement and deduced protein sequences to homologous regions in the genomes of Haemophilus influenzae and Escherichia coli. Four of the rnf gene products were found to be similar in sequence to components of an Na+-dependent NADH:ubiquinone oxidoreductase (NQR) from Vibrio alginolyticus []. The NQR-type enzyme of Klebsiella pneumoniae was shown to catalyse sodium-dependent NADH oxidation in the respiratory chain [].; GO: 0016020 membrane
Probab=26.62 E-value=2.2e+02 Score=28.50 Aligned_cols=87 Identities=23% Similarity=0.300 Sum_probs=48.7
Q ss_pred HHHHHHHhheeeEEeCCchhHHhhh--hchhhhHHHHHHHHHHHHHHHH---Hhh--hhHHHHHHHHHHHHHHHHHH--H
Q 007652 220 NWFLMIMCVVVVSIFQSTTDIANAY--GIAEVGVMLVSSTLVTIVMLLI---WQT--NLLLVLCFPLVFGSVELLYM--S 290 (594)
Q Consensus 220 Nw~Lmi~~l~v~~~F~~s~~l~~AY--GiaV~~~m~iTT~L~~~v~~~~---w~~--~~~~~~~~~~~f~~ie~~f~--s 290 (594)
|-..+.-.+.+.-...-|+++.||- |+||+.+|.+++.+..++=..+ .+. .....+....+.-.+|...- +
T Consensus 15 ~N~vl~~~LGlcp~l~vs~~~~~a~~mGlav~~V~~~s~~~~~~l~~~il~p~~~lr~~~~ilviA~~v~~v~~~l~~~~ 94 (190)
T PF02508_consen 15 NNPVLVQFLGLCPFLAVSTSLENALGMGLAVTFVLTLSSVLISLLRNFILAPPSYLRIIVFILVIASLVQLVEMVLRAYF 94 (190)
T ss_pred hHHHHHHHHHhcchhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 4444444555555555566666665 6788999999999999888777 432 22222333333333444321 1
Q ss_pred HhHhcccCCccHHHHHH
Q 007652 291 AVLSKIAEGGWLPLAFA 307 (594)
Q Consensus 291 a~l~Ki~~GGW~pl~ia 307 (594)
=.++|- =|-|.||+..
T Consensus 95 p~l~~~-LgiylpLi~~ 110 (190)
T PF02508_consen 95 PSLYKA-LGIYLPLITV 110 (190)
T ss_pred HHHHHH-HHHhhhHHHH
Confidence 122222 4777887765
No 43
>TIGR01940 nqrE NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit. This model represents the NqrE subunit of the six-protein, Na(+)-pumping NADH-quinone reductase of a number of marine and pathogenic Gram-negative bacteria. This oxidoreductase complex functions primarily as a sodium ion pump.
Probab=26.38 E-value=1.9e+02 Score=29.33 Aligned_cols=47 Identities=11% Similarity=0.287 Sum_probs=32.3
Q ss_pred HHHHHHHhheeeEEeCCchhHHhhh--hchhhhHHHHHHHHHHHHHHHH
Q 007652 220 NWFLMIMCVVVVSIFQSTTDIANAY--GIAEVGVMLVSSTLVTIVMLLI 266 (594)
Q Consensus 220 Nw~Lmi~~l~v~~~F~~s~~l~~AY--GiaV~~~m~iTT~L~~~v~~~~ 266 (594)
|-..+.-.+.++-...-|+++.||- |+||+.||.+++.+..++-..+
T Consensus 14 ~N~vl~~~LGlCp~l~vs~~~~~a~gmGlAvtfV~~~s~~~~~~i~~~i 62 (200)
T TIGR01940 14 ENMALSFFLGMCTFLAVSKKVSTAFGLGVAVTFVLTITVPINNLIYTYI 62 (200)
T ss_pred hhHHHHHHHhcCchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4444444444555555677777776 6789999999999988877654
No 44
>PF05545 FixQ: Cbb3-type cytochrome oxidase component FixQ; InterPro: IPR008621 This family consists of several Cbb3-type cytochrome oxidase components (FixQ/CcoQ). FixQ is found in nitrogen fixing bacteria. Since nitrogen fixation is an energy-consuming process, effective symbioses depend on operation of a respiratory chain with a high affinity for O2, closely coupled to ATP production. This requirement is fulfilled by a special three-subunit terminal oxidase (cytochrome terminal oxidase cbb3), which was first identified in Bradyrhizobium japonicum as the product of the fixNOQP operon [].
Probab=26.36 E-value=66 Score=24.92 Aligned_cols=28 Identities=32% Similarity=0.538 Sum_probs=14.8
Q ss_pred HHHHHHHHhhHhHHHHHHHHHhcCCChH
Q 007652 309 VFLCVMYIWNYGSVLKYRSEVREKISMD 336 (594)
Q Consensus 309 ~~~~iM~~W~~G~~~~~~~~~~~~~~~~ 336 (594)
+++.....|.|-+++|.++|...+++++
T Consensus 20 ~~F~gi~~w~~~~~~k~~~e~aa~lpl~ 47 (49)
T PF05545_consen 20 VFFIGIVIWAYRPRNKKRFEEAANLPLD 47 (49)
T ss_pred HHHHHHHHHHHcccchhhHHHHHccCcc
Confidence 3334445555555545555555566654
No 45
>PF00324 AA_permease: Amino acid permease; InterPro: IPR004841 Amino acid permeases are integral membrane proteins involved in the transport of amino acids into the cell. A number of such proteins have been found to be evolutionary related [], [], []. These proteins seem to contain up to 12 transmembrane segments. The best conserved region in this family is located in the second transmembrane segment. This domain is found in a wide variety of permeases, as well as several hypothetical proteins. ; GO: 0006810 transport, 0055085 transmembrane transport, 0016020 membrane
Probab=24.94 E-value=76 Score=35.12 Aligned_cols=36 Identities=28% Similarity=0.242 Sum_probs=22.7
Q ss_pred hhhhcccchhhhcchh--HhhhccCCCcccceeehhhh
Q 007652 91 AWSALGGCVLCITGAE--AMFADLGHFSVKAIQIAFTL 126 (594)
Q Consensus 91 g~~~LG~v~L~iTG~E--AlyADlGHF~~~~I~~aw~~ 126 (594)
=|..+.-.+.+.+|-| +.+|+==.=.+|+|..|-..
T Consensus 202 ~~~~~~~~~~af~G~e~~a~~a~E~k~P~k~IPra~~~ 239 (478)
T PF00324_consen 202 FFAALVFAFFAFVGFESIAILAEEAKNPRKTIPRATLL 239 (478)
T ss_pred HHHhhhhhhcccccccccccccccCCCchhhhhhHhhh
Confidence 3556666778888988 34555555566666555433
No 46
>PRK13108 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=24.58 E-value=70 Score=36.27 Aligned_cols=81 Identities=27% Similarity=0.277 Sum_probs=0.0
Q ss_pred hhhHHHHHHHHHhhcccccc-ccccchhhHHHHHHHHHHHhh--hhhhcccCcceeeec--ChH-HHHHHHHhcCcchhh
Q 007652 20 VIVSIIILVALFSIQRFGTG-KVGFMFAPVLALWFFSLGSIG--LYNLVKYDISVVRAF--NPI-YIYLFFKKNGKDAWS 93 (594)
Q Consensus 20 v~is~~ILv~LF~~Q~~GT~-kvg~~F~Pim~~Wf~~i~~~G--iyni~~~~p~Vl~A~--nP~-y~~~f~~~~~~~g~~ 93 (594)
+.++++||++++..+|+... ++-.=-.--+++|-+.-+++| +|.++. +++-+..- ||. -++++. ..|..
T Consensus 28 l~ialGil~a~~l~~r~~kr~g~~~~~i~dl~i~~vi~giIGARL~yVl~-~~~~y~~~~~~P~~~il~iw----~GGLs 102 (460)
T PRK13108 28 VCVITGIIVALLIGDRRLTARGGERGMTYDIALWAVPFGLIGGRLYHLAT-DWRTYFGDGGAGLAAALRIW----DGGLG 102 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHHHHhc-CHHHHhccccChHHHHHhhc----cCCch
Q ss_pred hcccchhhhcch
Q 007652 94 ALGGCVLCITGA 105 (594)
Q Consensus 94 ~LG~v~L~iTG~ 105 (594)
+-||++..+.|+
T Consensus 103 i~GGlIGg~l~~ 114 (460)
T PRK13108 103 IWGAVTLGVMGA 114 (460)
T ss_pred HHHHHHHHHHHH
No 47
>PRK05151 electron transport complex protein RsxA; Provisional
Probab=24.56 E-value=2.5e+02 Score=28.38 Aligned_cols=47 Identities=19% Similarity=0.277 Sum_probs=33.0
Q ss_pred HHHHHHHhheeeEEeCCchhHHhhh--hchhhhHHHHHHHHHHHHHHHH
Q 007652 220 NWFLMIMCVVVVSIFQSTTDIANAY--GIAEVGVMLVSSTLVTIVMLLI 266 (594)
Q Consensus 220 Nw~Lmi~~l~v~~~F~~s~~l~~AY--GiaV~~~m~iTT~L~~~v~~~~ 266 (594)
|-..+.-.+.++-...-|+++.||. |+||+.||.+++.+..++-..+
T Consensus 15 nN~vl~~~LG~Cp~laVs~~~~~a~gmGlav~fV~~~s~~~~~~i~~~i 63 (193)
T PRK05151 15 NNFVLVKFLGLCPFMGVSKKLETAIGMGLATTFVLTLASICAWLVNTYI 63 (193)
T ss_pred hhHHHHHHHhcCchhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4444444444555556677777776 6789999999999998877665
No 48
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=23.83 E-value=17 Score=36.01 Aligned_cols=60 Identities=20% Similarity=0.346 Sum_probs=46.8
Q ss_pred HHHHHhCCcE-EEeeecEEEEcCCCChhHHHHHHHHHHHH---hhhccCCCccccCCCCCeEEeee
Q 007652 529 LREAIDSGFT-YLLAHGDVRAKKKSFFLKKLVINYFYAFL---RRNCRAGAANMSVPHMNILQVGM 590 (594)
Q Consensus 529 L~~A~eaGVv-YIlG~s~vkar~~Ss~lKk~vIn~~Y~FL---RkNcR~~~~~L~IPh~~LlEVGm 590 (594)
+++++++|.- +|..+ .+.++=.++..|+-+|++|.-. ++..|.....+++|.++.+-||-
T Consensus 55 ~~e~k~~gi~v~vvSN--n~e~RV~~~~~~l~v~fi~~A~KP~~~~fr~Al~~m~l~~~~vvmVGD 118 (175)
T COG2179 55 LAELKEAGIKVVVVSN--NKESRVARAAEKLGVPFIYRAKKPFGRAFRRALKEMNLPPEEVVMVGD 118 (175)
T ss_pred HHHHHhcCCEEEEEeC--CCHHHHHhhhhhcCCceeecccCccHHHHHHHHHHcCCChhHEEEEcc
Confidence 4667778875 44444 5666667788899999888764 67888899999999999999984
No 49
>PF05313 Pox_P21: Poxvirus P21 membrane protein; InterPro: IPR007977 The p21 membrane protein of vaccinia virus, encoded by the A17L (or A18L) gene, has been reported to localise on the inner of the two membranes of the intracellular mature virus (IMV). It has also been shown that p21 acts as a membrane anchor for the externally located fusion protein P14 (A27L gene) [].; GO: 0016021 integral to membrane
Probab=21.68 E-value=1.2e+02 Score=30.34 Aligned_cols=62 Identities=21% Similarity=0.283 Sum_probs=40.6
Q ss_pred ehhhhhHhHHHHHHhccchhhhccCCCcccCcccccccCcchHHHHHHHHHHHHHhhhheeechhhHHHHHH
Q 007652 122 IAFTLVVFPCLLLAYMGQAAYLMKYPDSANRIFYDSVPDSLFWPVFVLAALAAMIASQAMISATFSCIKQAM 193 (594)
Q Consensus 122 ~aw~~~V~P~L~l~Y~GQ~A~l~~~p~~~~npFy~~~P~~~~~p~~ilAtlAaIIASQA~Isg~FSi~~Qa~ 193 (594)
+|=+.+=+|||+++|+= +.=+.||.+..| -++-+--++.|+..=++-||+ +|-+|+.+..-+
T Consensus 88 iAs~llP~PsLVIaYCl--~mqi~~~~~~~~-------~gMsIvcv~~Si~ti~~~~~s-~s~~~~ti~yIi 149 (189)
T PF05313_consen 88 IASLLLPFPSLVIAYCL--SMQIYNPGANNN-------VGMSIVCVIMSIITIIVNSVS-GSSGAYTISYII 149 (189)
T ss_pred HHHHHcCccHHHHHHHH--HheeecCCCcce-------ehhHHHHHHHHHHHHHHHhhh-HhHHHHHHHHHH
Confidence 34445568999999972 222668887666 344555566666666677888 777777766544
No 50
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=21.56 E-value=31 Score=36.89 Aligned_cols=61 Identities=23% Similarity=0.414 Sum_probs=0.0
Q ss_pred HHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHhHhcccCCccHHHHHH---HHHHHHHHHhhHhHHHHH
Q 007652 262 VMLLIWQT--NLLLVLCFPLVFGSVELLYMSAVLSKIAEGGWLPLAFA---SVFLCVMYIWNYGSVLKY 325 (594)
Q Consensus 262 v~~~~w~~--~~~~~~~~~~~f~~ie~~f~sa~l~Ki~~GGW~pl~ia---~~~~~iM~~W~~G~~~~~ 325 (594)
+|...|+. ++|..+.|++.|+.-=.+...|.+ .+=.||++++- .++|.-.++|-|-+....
T Consensus 125 Ym~lLr~~GAs~WtiLaFcLAF~LaivlLIIAv~---L~qaWfT~L~dL~WL~LFlaiLIWlY~H~~~~ 190 (381)
T PF05297_consen 125 YMWLLRELGASFWTILAFCLAFLLAIVLLIIAVL---LHQAWFTILVDLYWLLLFLAILIWLYVHDQRH 190 (381)
T ss_dssp ---------------------------------------------------------------------
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 34445553 677788888877654444445554 46789999875 456777889988766553
No 51
>cd05900 Ig_Aggrecan Immunoglobulin (Ig)-like domain of the chondroitin sulfate proteoglycan core protein (CSPG), aggrecan. Ig_Aggrecan: immunoglobulin (Ig)-like domain of the chondroitin sulfate proteoglycan core protein (CSPG), aggrecan. These aggregates contribute to the tissue's load bearing properties. In CSPGs, the Ig-like domain is followed by hyaluronan (HA)-binding tandem repeats, and a C-terminal region with epidermal growth factor-like, lectin-like, and complement regulatory protein-like domains. Separating these N- and C-terminal regions is a nonhomologous glycosaminoglycan attachment region. In cartilage, aggrecan forms cartilage link protein stabilized aggregates with HA. These aggregates contribute to the tissue's load bearing properties. Aggrecan has a wide distribution in connective tissue and extracellular matrices. Members of the vertebrate HPLN (hyaluronan/HA and proteoglycan binding link) protein family are physically linked adjacent to CSPG genes.
Probab=21.46 E-value=1.1e+02 Score=27.70 Aligned_cols=28 Identities=18% Similarity=0.320 Sum_probs=21.6
Q ss_pred eEEEEEecCCCCcEEEEEEEEeeccccc
Q 007652 400 RFLFRRVGPKDYHMFRCVTRYGYKDVRK 427 (594)
Q Consensus 400 R~~v~~~~~~~~~~yr~vvryGY~d~~~ 427 (594)
-+.+..+...+.|.|+|.+.+|.-|...
T Consensus 75 sL~I~nl~~sDsG~Y~C~V~~g~~~~~~ 102 (112)
T cd05900 75 TLEITELRSNDSGTYRCEVMHGIEDNYD 102 (112)
T ss_pred EEEEeecccccCEEEEEEEecCCCCcee
Confidence 4556666666779999999999887653
No 52
>TIGR00145 FTR1 family protein. A characterized member from yeast acts as oxidase-coupled high affinity iron transporter. Note that the apparent member from E. coli K12-MG1655 has a frameshift by homology with member sequences from other species.
Probab=21.03 E-value=5.2e+02 Score=27.50 Aligned_cols=31 Identities=23% Similarity=0.342 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHHHhhHhHHHHHHHHHhcCC
Q 007652 303 PLAFASVFLCVMYIWNYGSVLKYRSEVREKI 333 (594)
Q Consensus 303 pl~ia~~~~~iM~~W~~G~~~~~~~~~~~~~ 333 (594)
..++|+++++.|..|-..+.++++.+.++++
T Consensus 79 ~~lvAv~~l~~m~~Wm~~~~~~~~~~i~~~~ 109 (283)
T TIGR00145 79 FGVIAVVMLSYMGLWMLRMQRKWRVKIERQL 109 (283)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6789999999999999876677766665544
Done!