Query 007654
Match_columns 594
No_of_seqs 153 out of 734
Neff 6.9
Searched_HMMs 46136
Date Thu Mar 28 13:33:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007654.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007654hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PTZ00207 hypothetical protein; 100.0 4.7E-78 1E-82 673.4 36.9 506 12-587 23-565 (591)
2 PF06813 Nodulin-like: Nodulin 100.0 5E-56 1.1E-60 448.1 24.4 248 15-262 1-250 (250)
3 TIGR00890 2A0111 Oxalate/Forma 100.0 2.2E-26 4.8E-31 241.0 26.1 370 14-568 1-376 (377)
4 KOG2504 Monocarboxylate transp 99.9 2.2E-25 4.7E-30 247.5 21.2 424 15-574 44-476 (509)
5 PRK11273 glpT sn-glycerol-3-ph 99.9 3.2E-21 7E-26 211.3 30.9 422 9-590 21-451 (452)
6 TIGR00892 2A0113 monocarboxyla 99.9 3.9E-21 8.6E-26 211.2 26.9 407 14-581 16-432 (455)
7 PRK09556 uhpT sugar phosphate 99.9 2.6E-20 5.7E-25 205.0 31.4 399 31-574 44-449 (467)
8 PRK11663 regulatory protein Uh 99.9 4.2E-20 9.1E-25 201.5 30.3 381 30-572 37-422 (434)
9 PRK09705 cynX putative cyanate 99.9 6.1E-20 1.3E-24 197.7 28.8 365 22-576 14-383 (393)
10 PLN00028 nitrate transmembrane 99.9 5.5E-20 1.2E-24 203.3 25.0 392 15-578 35-437 (476)
11 TIGR00893 2A0114 d-galactonate 99.9 1.4E-19 3.1E-24 189.6 25.3 381 32-572 10-397 (399)
12 PRK11551 putative 3-hydroxyphe 99.9 2.3E-19 5.1E-24 192.5 27.4 384 10-575 8-397 (406)
13 PRK03699 putative transporter; 99.8 1.2E-18 2.6E-23 187.3 31.0 377 12-579 2-385 (394)
14 PRK03545 putative arabinose tr 99.8 5.6E-18 1.2E-22 181.5 30.3 368 13-574 5-380 (390)
15 TIGR00712 glpT glycerol-3-phos 99.8 3.8E-18 8.2E-23 186.2 28.2 411 8-578 18-437 (438)
16 PRK12307 putative sialic acid 99.8 6.3E-18 1.4E-22 182.6 27.7 366 8-517 9-385 (426)
17 TIGR00881 2A0104 phosphoglycer 99.8 6.7E-18 1.4E-22 177.0 25.7 357 31-517 10-374 (379)
18 TIGR02332 HpaX 4-hydroxyphenyl 99.8 2.7E-18 5.9E-23 186.2 22.4 385 14-517 5-397 (412)
19 PRK05122 major facilitator sup 99.8 3.1E-17 6.6E-22 175.9 29.4 374 16-579 17-394 (399)
20 TIGR00891 2A0112 putative sial 99.8 1.8E-17 3.8E-22 176.1 26.3 150 9-165 4-156 (405)
21 TIGR00897 2A0118 polyol permea 99.8 7.7E-17 1.7E-21 173.9 31.0 382 13-574 13-401 (402)
22 PRK12382 putative transporter; 99.8 2.1E-16 4.6E-21 169.2 31.1 351 34-574 34-389 (392)
23 PRK15034 nitrate/nitrite trans 99.8 9.6E-17 2.1E-21 176.0 27.3 380 26-578 44-458 (462)
24 TIGR00896 CynX cyanate transpo 99.8 5.8E-17 1.3E-21 171.2 24.5 330 33-517 17-350 (355)
25 TIGR00879 SP MFS transporter, 99.8 7.3E-17 1.6E-21 174.1 25.6 127 35-165 47-183 (481)
26 TIGR00895 2A0115 benzoate tran 99.8 4.4E-17 9.5E-22 172.2 21.9 374 12-512 12-397 (398)
27 COG2223 NarK Nitrate/nitrite t 99.7 3.4E-16 7.5E-21 166.0 25.4 359 32-578 30-405 (417)
28 TIGR00894 2A0114euk Na(+)-depe 99.7 3.6E-16 7.8E-21 171.6 24.6 378 45-582 70-458 (465)
29 TIGR00898 2A0119 cation transp 99.7 8E-17 1.7E-21 178.3 19.3 384 30-573 103-494 (505)
30 PRK03633 putative MFS family t 99.7 1.3E-15 2.9E-20 162.8 28.0 321 34-517 24-349 (381)
31 PRK03893 putative sialic acid 99.7 3.2E-15 7E-20 164.8 30.8 404 12-517 15-430 (496)
32 cd06174 MFS The Major Facilita 99.7 2.2E-15 4.8E-20 155.7 26.1 331 31-572 14-350 (352)
33 PRK10091 MFS transport protein 99.7 4.5E-15 9.8E-20 158.9 29.3 347 33-572 20-374 (382)
34 PRK09528 lacY galactoside perm 99.7 1.4E-15 3E-20 164.8 24.9 178 354-572 216-401 (420)
35 PRK10504 putative transporter; 99.7 1.6E-14 3.5E-19 158.6 32.2 397 15-518 9-418 (471)
36 PRK09874 drug efflux system pr 99.7 3.7E-15 8E-20 159.6 25.8 182 356-578 213-402 (408)
37 TIGR01299 synapt_SV2 synaptic 99.7 3.9E-15 8.6E-20 172.0 26.8 146 13-165 163-311 (742)
38 TIGR00889 2A0110 nucleoside tr 99.7 4.1E-15 8.8E-20 161.9 25.4 191 354-579 201-407 (418)
39 PRK10213 nepI ribonucleoside t 99.7 1.8E-14 3.9E-19 155.4 30.2 345 14-517 17-368 (394)
40 TIGR00885 fucP L-fucose:H+ sym 99.7 6.7E-15 1.4E-19 159.9 26.0 359 27-517 13-383 (410)
41 PRK11646 multidrug resistance 99.7 1.3E-14 2.8E-19 156.8 27.9 385 12-586 9-399 (400)
42 TIGR00900 2A0121 H+ Antiporter 99.7 6.1E-15 1.3E-19 154.0 22.5 333 42-517 25-365 (365)
43 TIGR00710 efflux_Bcr_CflA drug 99.7 1.4E-14 3.1E-19 153.2 25.5 342 13-510 3-356 (385)
44 TIGR00903 2A0129 major facilit 99.7 1.4E-14 3E-19 155.4 25.4 330 33-513 8-340 (368)
45 PRK15402 multidrug efflux syst 99.7 2E-14 4.3E-19 154.8 26.5 354 11-517 7-372 (406)
46 TIGR00886 2A0108 nitrite extru 99.7 1E-14 2.3E-19 153.6 23.5 127 28-161 13-142 (366)
47 PRK09952 shikimate transporter 99.7 5.7E-14 1.2E-18 153.7 30.0 181 356-575 244-434 (438)
48 PRK10642 proline/glycine betai 99.7 5E-14 1.1E-18 156.3 29.9 160 353-517 240-406 (490)
49 PRK10406 alpha-ketoglutarate t 99.7 5.6E-14 1.2E-18 153.2 28.8 143 10-153 15-168 (432)
50 TIGR00711 efflux_EmrB drug res 99.6 2.8E-14 6E-19 156.5 25.4 383 34-517 20-412 (485)
51 TIGR00887 2A0109 phosphate:H+ 99.6 2.1E-14 4.5E-19 159.7 24.3 115 47-162 52-168 (502)
52 PRK10489 enterobactin exporter 99.6 2.6E-14 5.6E-19 154.6 23.9 335 35-517 36-376 (417)
53 COG2271 UhpC Sugar phosphate p 99.6 3.8E-14 8.1E-19 150.5 23.8 378 34-584 47-444 (448)
54 PRK15075 citrate-proton sympor 99.6 2.4E-13 5.3E-18 148.2 30.6 119 33-158 32-166 (434)
55 PF07690 MFS_1: Major Facilita 99.6 1.7E-15 3.8E-20 157.5 12.7 328 36-506 16-352 (352)
56 TIGR00883 2A0106 metabolite-pr 99.6 7E-14 1.5E-18 147.3 23.8 159 353-517 209-377 (394)
57 PRK14995 methyl viologen resis 99.6 4.9E-13 1.1E-17 148.6 31.4 381 35-517 25-415 (495)
58 TIGR00899 2A0120 sugar efflux 99.6 3E-13 6.4E-18 142.8 28.3 174 357-572 195-372 (375)
59 PRK10077 xylE D-xylose transpo 99.6 6.7E-13 1.5E-17 145.6 31.3 129 33-161 26-172 (479)
60 PRK11043 putative transporter; 99.6 2.4E-13 5.2E-18 146.0 26.9 346 15-515 5-357 (401)
61 PRK10054 putative transporter; 99.6 2.6E-13 5.7E-18 146.4 26.8 145 10-162 3-149 (395)
62 PRK10133 L-fucose transporter; 99.6 1.3E-12 2.8E-17 143.3 29.7 358 33-517 43-409 (438)
63 PRK10473 multidrug efflux syst 99.6 2.3E-12 4.9E-17 138.0 29.3 139 14-160 2-142 (392)
64 PRK11652 emrD multidrug resist 99.6 1.5E-12 3.2E-17 139.5 27.3 140 11-158 4-145 (394)
65 PRK11010 ampG muropeptide tran 99.6 2.4E-12 5.2E-17 143.3 29.1 183 354-575 215-404 (491)
66 TIGR00902 2A0127 phenyl propri 99.5 2.8E-12 6E-17 137.5 26.7 157 353-517 197-357 (382)
67 TIGR00882 2A0105 oligosacchari 99.5 5E-12 1.1E-16 135.8 28.3 179 353-572 207-393 (396)
68 PRK11102 bicyclomycin/multidru 99.5 2E-12 4.3E-17 137.1 24.2 125 33-164 8-134 (377)
69 PRK15011 sugar efflux transpor 99.5 1.3E-11 2.8E-16 132.9 30.4 150 382-573 237-390 (393)
70 PRK06814 acylglycerophosphoeth 99.5 4.6E-12 1E-16 154.2 26.9 159 354-516 218-397 (1140)
71 PRK08633 2-acyl-glycerophospho 99.5 1.3E-11 2.9E-16 149.8 28.9 342 36-512 30-381 (1146)
72 PRK11902 ampG muropeptide tran 99.5 2.4E-11 5.2E-16 131.1 26.8 116 42-163 26-148 (402)
73 PRK11128 putative 3-phenylprop 99.4 5.2E-11 1.1E-15 127.5 28.4 157 353-517 197-357 (382)
74 KOG2532 Permease of the major 99.4 9.1E-12 2E-16 137.4 20.8 367 43-574 65-447 (466)
75 TIGR00901 2A0125 AmpG-related 99.4 9.3E-12 2E-16 131.4 19.7 137 355-497 200-354 (356)
76 COG2814 AraJ Arabinose efflux 99.4 4.3E-10 9.3E-15 120.6 31.0 374 14-579 10-391 (394)
77 TIGR00792 gph sugar (Glycoside 99.3 8.1E-11 1.8E-15 127.5 19.9 157 354-518 215-383 (437)
78 TIGR02718 sider_RhtX_FptX side 99.3 5.8E-10 1.3E-14 119.6 25.3 175 354-569 201-386 (390)
79 COG0738 FucP Fucose permease [ 99.3 2.8E-09 6E-14 113.2 28.4 367 17-517 15-386 (422)
80 PRK11195 lysophospholipid tran 99.3 1.2E-09 2.5E-14 118.0 26.1 132 15-158 4-137 (393)
81 PRK15403 multidrug efflux syst 99.2 5.4E-09 1.2E-13 113.7 28.9 122 33-161 33-156 (413)
82 KOG0569 Permease of the major 99.2 1.9E-08 4.2E-13 110.8 28.2 364 38-517 41-432 (485)
83 TIGR00924 yjdL_sub1_fam amino 99.1 6E-07 1.3E-11 99.7 37.1 126 36-168 31-164 (475)
84 PRK09584 tppB putative tripept 99.1 2.7E-07 5.8E-12 103.2 32.7 158 33-196 38-201 (500)
85 PRK09669 putative symporter Ya 99.1 1.8E-08 3.9E-13 110.4 22.3 157 354-518 222-391 (444)
86 PRK09848 glucuronide transport 99.0 1E-08 2.2E-13 112.3 20.2 157 354-517 221-390 (448)
87 PRK10207 dipeptide/tripeptide 99.0 8E-07 1.7E-11 99.2 35.1 118 37-160 36-158 (489)
88 KOG2563 Permease of the major 99.0 2.3E-08 4.9E-13 107.6 20.6 150 10-161 38-192 (480)
89 COG2807 CynX Cyanate permease 99.0 3.4E-07 7.3E-12 96.4 26.5 344 16-517 11-361 (395)
90 TIGR01299 synapt_SV2 synaptic 99.0 1.9E-08 4E-13 117.0 18.3 190 354-571 156-352 (742)
91 PF13347 MFS_2: MFS/sugar tran 98.9 1.3E-07 2.9E-12 103.0 21.9 160 353-519 217-388 (428)
92 PRK10504 putative transporter; 98.9 1.9E-08 4.2E-13 110.5 15.1 177 360-577 9-188 (471)
93 KOG2533 Permease of the major 98.9 1.5E-07 3.2E-12 104.7 22.1 344 42-515 72-426 (495)
94 PRK10429 melibiose:sodium symp 98.9 6.7E-08 1.5E-12 107.0 19.3 156 355-518 225-396 (473)
95 PRK10213 nepI ribonucleoside t 98.8 2.8E-08 6.1E-13 107.3 13.9 132 379-517 38-172 (394)
96 TIGR01272 gluP glucose/galacto 98.8 2.9E-07 6.3E-12 96.6 20.5 153 356-517 135-292 (310)
97 TIGR00710 efflux_Bcr_CflA drug 98.8 9.3E-08 2E-12 101.1 16.5 173 360-573 3-179 (385)
98 TIGR00805 oat sodium-independe 98.8 7.1E-08 1.5E-12 110.9 15.6 125 35-159 52-222 (633)
99 PRK10054 putative transporter; 98.8 5.9E-08 1.3E-12 104.8 14.0 176 360-577 6-185 (395)
100 PF07690 MFS_1: Major Facilita 98.8 1.7E-08 3.7E-13 104.9 9.4 148 386-574 22-172 (352)
101 TIGR00924 yjdL_sub1_fam amino 98.8 6.6E-08 1.4E-12 107.4 14.6 171 361-572 10-190 (475)
102 TIGR00900 2A0121 H+ Antiporter 98.8 7.5E-08 1.6E-12 100.5 13.3 171 363-574 1-179 (365)
103 PRK11663 regulatory protein Uh 98.8 1.2E-07 2.5E-12 103.7 15.1 172 359-571 21-195 (434)
104 PRK10091 MFS transport protein 98.8 1.2E-07 2.6E-12 101.7 14.8 170 360-570 2-174 (382)
105 PRK09584 tppB putative tripept 98.7 1.4E-07 3.1E-12 105.4 15.6 177 355-572 14-199 (500)
106 PF03825 Nuc_H_symport: Nucleo 98.7 6.2E-06 1.3E-10 89.8 27.8 160 353-518 199-367 (400)
107 PRK15403 multidrug efflux syst 98.7 1.7E-07 3.7E-12 101.9 15.5 156 376-572 31-189 (413)
108 PF00083 Sugar_tr: Sugar (and 98.7 2.7E-11 5.8E-16 132.1 -15.2 106 51-161 46-154 (451)
109 cd06174 MFS The Major Facilita 98.7 2.8E-07 6.1E-12 95.1 15.2 170 364-574 2-174 (352)
110 PRK03699 putative transporter; 98.7 3.4E-07 7.4E-12 98.5 14.8 171 361-571 7-180 (394)
111 TIGR00893 2A0114 d-galactonate 98.6 1.4E-07 3.1E-12 98.8 11.0 148 385-573 18-168 (399)
112 PRK09528 lacY galactoside perm 98.6 1.5E-07 3.2E-12 102.1 11.4 177 356-574 5-191 (420)
113 PF01306 LacY_symp: LacY proto 98.6 1.5E-05 3.3E-10 86.6 26.5 184 354-579 213-405 (412)
114 PRK15462 dipeptide/tripeptide 98.6 0.00018 3.8E-09 80.4 35.7 129 31-165 24-158 (493)
115 PRK15402 multidrug efflux syst 98.6 7.1E-07 1.5E-11 96.1 16.4 171 360-571 8-185 (406)
116 TIGR00806 rfc RFC reduced fola 98.6 3.6E-06 7.8E-11 92.5 21.5 128 30-165 40-170 (511)
117 PRK11102 bicyclomycin/multidru 98.6 5E-07 1.1E-11 95.8 14.6 156 377-573 7-165 (377)
118 TIGR00712 glpT glycerol-3-phos 98.6 9.8E-07 2.1E-11 96.5 17.3 153 383-575 48-207 (438)
119 PRK11652 emrD multidrug resist 98.6 8.8E-07 1.9E-11 95.0 16.4 170 361-571 8-180 (394)
120 PF11700 ATG22: Vacuole efflux 98.6 2.1E-05 4.5E-10 87.6 27.6 187 353-576 273-470 (477)
121 PRK03545 putative arabinose tr 98.6 6.9E-07 1.5E-11 95.8 15.3 149 383-572 31-182 (390)
122 PRK11195 lysophospholipid tran 98.6 3.8E-07 8.3E-12 98.5 13.2 147 360-515 2-150 (393)
123 TIGR00788 fbt folate/biopterin 98.6 1.4E-05 3.1E-10 88.6 25.9 123 27-155 36-165 (468)
124 KOG3764 Vesicular amine transp 98.6 1.9E-06 4E-11 91.7 17.1 107 46-159 101-210 (464)
125 PF05977 MFS_3: Transmembrane 98.6 1.5E-05 3.3E-10 89.6 25.3 96 45-143 39-136 (524)
126 PRK10489 enterobactin exporter 98.6 5.5E-07 1.2E-11 97.5 13.2 160 356-517 12-174 (417)
127 PRK09874 drug efflux system pr 98.6 2.3E-06 4.9E-11 91.7 17.6 174 360-575 13-194 (408)
128 TIGR00890 2A0111 Oxalate/Forma 98.5 6.4E-07 1.4E-11 93.7 12.7 150 383-574 25-177 (377)
129 TIGR00711 efflux_EmrB drug res 98.5 3.4E-07 7.4E-12 100.5 10.7 152 382-574 23-177 (485)
130 PF06609 TRI12: Fungal trichot 98.5 5.7E-05 1.2E-09 85.7 28.5 129 14-151 40-172 (599)
131 TIGR00892 2A0113 monocarboxyla 98.5 9.2E-07 2E-11 97.5 14.0 149 383-573 41-193 (455)
132 PRK11273 glpT sn-glycerol-3-ph 98.5 2.4E-06 5.2E-11 93.9 16.6 172 364-575 28-209 (452)
133 TIGR02332 HpaX 4-hydroxyphenyl 98.5 1.7E-06 3.7E-11 94.0 15.1 157 381-572 27-187 (412)
134 TIGR00886 2A0108 nitrite extru 98.5 1.2E-06 2.7E-11 92.1 13.6 146 361-514 1-151 (366)
135 PRK10473 multidrug efflux syst 98.5 2.4E-06 5.1E-11 91.5 15.8 156 378-574 20-178 (392)
136 TIGR00891 2A0112 putative sial 98.5 2.6E-06 5.6E-11 90.5 15.9 147 363-516 14-163 (405)
137 PRK10207 dipeptide/tripeptide 98.5 1.7E-06 3.7E-11 96.5 14.8 149 361-516 14-170 (489)
138 PRK11043 putative transporter; 98.5 2.2E-06 4.9E-11 92.0 15.3 159 374-573 19-180 (401)
139 PRK11551 putative 3-hydroxyphe 98.5 2.3E-06 5.1E-11 91.8 15.2 123 385-514 39-164 (406)
140 TIGR00895 2A0115 benzoate tran 98.5 1.6E-06 3.4E-11 91.6 13.5 127 384-517 40-169 (398)
141 PRK15462 dipeptide/tripeptide 98.5 1.8E-06 4E-11 96.2 14.5 170 361-571 9-186 (493)
142 PRK14995 methyl viologen resis 98.5 1.4E-06 2.9E-11 97.2 13.5 154 380-574 25-182 (495)
143 KOG0254 Predicted transporter 98.5 3.2E-05 6.9E-10 86.7 24.3 378 51-581 89-490 (513)
144 TIGR00881 2A0104 phosphoglycer 98.5 9.6E-07 2.1E-11 92.4 11.2 149 385-574 19-171 (379)
145 PRK12382 putative transporter; 98.4 1.8E-06 3.9E-11 92.5 13.2 153 357-516 11-175 (392)
146 TIGR00897 2A0118 polyol permea 98.4 1.9E-06 4.2E-11 93.0 13.0 152 359-517 12-170 (402)
147 TIGR00882 2A0105 oligosacchari 98.4 2.1E-06 4.6E-11 92.2 12.7 171 360-571 1-180 (396)
148 PRK11646 multidrug resistance 98.4 6.7E-06 1.4E-10 89.0 15.6 171 359-572 9-183 (400)
149 PRK03893 putative sialic acid 98.4 5.8E-06 1.3E-10 91.3 14.8 149 361-516 20-171 (496)
150 PRK09705 cynX putative cyanate 98.4 8.6E-06 1.9E-10 87.8 15.7 148 361-516 6-159 (393)
151 TIGR00880 2_A_01_02 Multidrug 98.3 3.4E-06 7.3E-11 75.0 10.4 132 401-573 5-137 (141)
152 PRK11462 putative transporter; 98.3 0.00013 2.7E-09 80.9 24.8 158 354-517 221-389 (460)
153 PRK12307 putative sialic acid 98.3 8E-06 1.7E-10 88.3 14.8 127 383-516 40-169 (426)
154 KOG0255 Synaptic vesicle trans 98.3 9.3E-05 2E-09 82.8 23.6 121 34-162 100-223 (521)
155 PRK09556 uhpT sugar phosphate 98.3 8.6E-06 1.9E-10 89.9 14.8 153 361-515 25-184 (467)
156 TIGR00896 CynX cyanate transpo 98.3 1.1E-05 2.4E-10 85.1 13.8 125 384-516 23-149 (355)
157 PRK08633 2-acyl-glycerophospho 98.3 8.8E-06 1.9E-10 99.3 14.7 155 356-515 4-165 (1146)
158 TIGR00903 2A0129 major facilit 98.3 7.7E-06 1.7E-10 87.9 12.5 148 383-572 13-163 (368)
159 TIGR01301 GPH_sucrose GPH fami 98.3 0.00021 4.6E-09 79.4 24.0 184 361-579 258-476 (477)
160 TIGR00879 SP MFS transporter, 98.2 2E-05 4.3E-10 85.0 15.3 105 398-509 75-183 (481)
161 PRK05122 major facilitator sup 98.2 1.5E-05 3.3E-10 85.5 14.1 123 387-516 42-175 (399)
162 PTZ00207 hypothetical protein; 98.2 1.4E-05 3.1E-10 90.7 14.1 144 361-511 25-178 (591)
163 PLN00028 nitrate transmembrane 98.2 4E-05 8.7E-10 85.1 16.4 180 361-573 36-218 (476)
164 KOG0253 Synaptic vesicle trans 98.1 0.00012 2.5E-09 77.6 17.9 145 34-189 96-244 (528)
165 PRK06814 acylglycerophosphoeth 98.1 2.1E-05 4.5E-10 96.4 14.5 160 355-517 5-172 (1140)
166 COG2270 Permeases of the major 98.1 0.00039 8.4E-09 75.1 21.7 122 390-517 282-405 (438)
167 PRK03633 putative MFS family t 98.1 1.9E-05 4.2E-10 84.4 12.0 150 359-515 4-156 (381)
168 COG2814 AraJ Arabinose efflux 98.1 6.1E-05 1.3E-09 81.3 15.6 174 361-575 13-189 (394)
169 PRK10077 xylE D-xylose transpo 98.1 3.4E-05 7.3E-10 84.8 14.1 170 370-572 20-213 (479)
170 PF06609 TRI12: Fungal trichot 98.1 4.2E-05 9.1E-10 86.8 14.9 176 359-576 38-219 (599)
171 PRK15034 nitrate/nitrite trans 98.1 5.5E-05 1.2E-09 83.7 15.2 187 358-573 31-231 (462)
172 PRK11010 ampG muropeptide tran 98.1 5.2E-05 1.1E-09 84.6 14.5 160 373-572 23-193 (491)
173 KOG0252 Inorganic phosphate tr 98.1 0.00016 3.5E-09 78.5 17.2 153 383-574 326-498 (538)
174 TIGR00899 2A0120 sugar efflux 98.0 7E-05 1.5E-09 79.0 14.5 145 388-572 25-174 (375)
175 TIGR00894 2A0114euk Na(+)-depe 98.0 2.1E-05 4.4E-10 86.6 10.7 135 399-573 81-218 (465)
176 PRK10642 proline/glycine betai 98.0 6.2E-05 1.3E-09 83.8 13.7 164 28-196 262-430 (490)
177 PRK15011 sugar efflux transpor 98.0 0.00011 2.3E-09 79.3 14.1 158 31-195 231-390 (393)
178 PRK11128 putative 3-phenylprop 98.0 0.0001 2.2E-09 79.0 13.7 129 382-517 25-156 (382)
179 TIGR00902 2A0127 phenyl propri 97.9 8.2E-05 1.8E-09 79.8 12.8 147 364-517 7-156 (382)
180 PRK09952 shikimate transporter 97.9 0.00029 6.3E-09 77.2 16.1 103 405-514 75-186 (438)
181 TIGR00885 fucP L-fucose:H+ sym 97.9 0.00018 4E-09 78.3 14.1 146 362-515 4-156 (410)
182 TIGR00898 2A0119 cation transp 97.8 8E-05 1.7E-09 82.6 10.7 144 385-572 113-262 (505)
183 TIGR00887 2A0109 phosphate:H+ 97.8 0.00023 4.9E-09 79.4 14.1 110 398-514 60-176 (502)
184 PRK10406 alpha-ketoglutarate t 97.8 0.00027 5.9E-09 77.1 13.6 120 31-153 258-380 (432)
185 COG3104 PTR2 Dipeptide/tripept 97.8 0.00013 2.8E-09 80.1 10.6 146 391-576 56-208 (498)
186 TIGR00805 oat sodium-independe 97.8 7.7E-05 1.7E-09 86.0 9.3 125 385-516 57-235 (633)
187 TIGR00901 2A0125 AmpG-related 97.8 0.00046 9.9E-09 72.8 14.4 160 384-572 11-176 (356)
188 TIGR00883 2A0106 metabolite-pr 97.7 0.00037 8.1E-09 73.3 12.7 102 406-514 47-157 (394)
189 PRK11902 ampG muropeptide tran 97.7 0.00048 1E-08 74.3 13.4 158 372-569 9-177 (402)
190 TIGR02718 sider_RhtX_FptX side 97.7 0.00049 1.1E-08 73.8 13.1 149 16-168 211-363 (390)
191 KOG4686 Predicted sugar transp 97.6 0.00028 6.1E-09 72.3 10.1 147 360-517 263-416 (459)
192 TIGR00889 2A0110 nucleoside tr 97.6 0.00026 5.6E-09 77.3 10.5 148 16-169 211-369 (418)
193 PRK15075 citrate-proton sympor 97.6 0.0012 2.5E-08 72.2 15.4 119 30-152 252-374 (434)
194 PRK10133 L-fucose transporter; 97.5 0.001 2.3E-08 73.1 13.9 145 361-513 26-177 (438)
195 TIGR00880 2_A_01_02 Multidrug 97.5 0.00063 1.4E-08 60.2 9.9 97 66-169 14-111 (141)
196 PF03209 PUCC: PUCC protein; 97.5 0.094 2E-06 56.9 27.9 155 392-574 240-398 (403)
197 TIGR00806 rfc RFC reduced fola 97.5 0.002 4.4E-08 71.2 14.4 156 386-581 51-210 (511)
198 TIGR01301 GPH_sucrose GPH fami 97.4 0.0022 4.7E-08 71.5 14.8 168 381-575 24-219 (477)
199 COG2211 MelB Na+/melibiose sym 97.4 0.03 6.5E-07 62.0 22.5 158 354-519 229-400 (467)
200 COG2271 UhpC Sugar phosphate p 97.3 0.0031 6.7E-08 68.2 13.7 147 384-571 52-203 (448)
201 KOG3764 Vesicular amine transp 97.3 0.00068 1.5E-08 72.6 7.8 140 399-579 111-252 (464)
202 PF05977 MFS_3: Transmembrane 97.3 0.0024 5.2E-08 72.1 12.5 147 355-517 4-167 (524)
203 KOG1330 Sugar transporter/spin 97.2 0.0014 3E-08 71.6 9.6 129 14-149 30-161 (493)
204 KOG0255 Synaptic vesicle trans 97.2 0.0025 5.4E-08 71.4 11.8 128 398-569 122-250 (521)
205 KOG2533 Permease of the major 97.1 0.0019 4.2E-08 72.2 9.3 142 398-573 85-226 (495)
206 TIGR00792 gph sugar (Glycoside 97.0 0.0062 1.3E-07 65.9 12.4 154 390-572 29-192 (437)
207 TIGR00926 2A1704 Peptide:H+ sy 97.0 0.0091 2E-07 69.1 13.6 152 390-575 17-183 (654)
208 PF01306 LacY_symp: LacY proto 96.9 0.0045 9.8E-08 67.5 10.4 152 358-516 4-165 (412)
209 KOG0252 Inorganic phosphate tr 96.9 0.0023 5.1E-08 69.7 7.9 95 399-495 88-187 (538)
210 COG2807 CynX Cyanate permease 96.9 0.024 5.2E-07 60.4 14.7 168 364-572 11-184 (395)
211 PF03092 BT1: BT1 family; Int 96.6 0.25 5.4E-06 54.5 21.2 107 37-146 11-125 (433)
212 TIGR00788 fbt folate/biopterin 96.6 0.041 8.9E-07 61.2 14.9 178 359-575 24-210 (468)
213 COG3104 PTR2 Dipeptide/tripept 96.6 1.7 3.8E-05 48.3 28.1 147 43-196 53-206 (498)
214 KOG2615 Permease of the major 96.5 0.0078 1.7E-07 64.4 7.9 108 399-514 73-181 (451)
215 PF03825 Nuc_H_symport: Nucleo 96.4 0.044 9.6E-07 59.8 13.5 154 9-170 202-363 (400)
216 KOG0254 Predicted transporter 96.4 0.016 3.5E-07 65.0 10.1 117 378-500 63-190 (513)
217 TIGR01272 gluP glucose/galacto 96.3 0.027 5.9E-07 59.0 11.0 118 39-165 164-284 (310)
218 KOG2504 Monocarboxylate transp 96.3 0.017 3.6E-07 65.1 9.6 168 364-573 45-220 (509)
219 PRK09669 putative symporter Ya 96.3 0.04 8.7E-07 60.3 12.4 156 390-573 39-203 (444)
220 PRK09848 glucuronide transport 96.2 0.027 5.8E-07 61.8 10.3 86 42-132 255-341 (448)
221 COG2223 NarK Nitrate/nitrite t 96.1 0.02 4.4E-07 61.9 8.7 143 34-181 236-388 (417)
222 KOG2615 Permease of the major 95.8 0.7 1.5E-05 49.9 18.4 65 451-516 351-415 (451)
223 PF01770 Folate_carrier: Reduc 95.8 1.4 3E-05 48.3 21.2 131 355-492 241-380 (412)
224 PF11700 ATG22: Vacuole efflux 95.4 0.24 5.3E-06 55.3 14.2 131 8-143 274-413 (477)
225 COG2270 Permeases of the major 95.2 0.2 4.3E-06 54.6 11.9 143 17-169 256-400 (438)
226 PRK10429 melibiose:sodium symp 95.0 0.12 2.6E-06 57.3 10.2 60 67-128 283-342 (473)
227 PF13347 MFS_2: MFS/sugar tran 94.9 0.18 3.9E-06 54.9 11.0 115 6-128 216-333 (428)
228 PF03137 OATP: Organic Anion T 94.5 0.011 2.3E-07 67.1 0.2 77 19-97 8-85 (539)
229 KOG0569 Permease of the major 94.5 0.4 8.7E-06 53.6 12.4 138 30-168 284-427 (485)
230 KOG2816 Predicted transporter 94.4 1.9 4.2E-05 48.0 17.5 121 392-519 273-396 (463)
231 PF00083 Sugar_tr: Sugar (and 94.3 0.0043 9.3E-08 67.6 -3.4 99 398-502 50-152 (451)
232 KOG1330 Sugar transporter/spin 94.2 0.014 3.1E-07 63.8 0.2 145 390-574 62-209 (493)
233 COG0477 ProP Permeases of the 93.9 0.92 2E-05 44.3 12.6 112 397-515 42-158 (338)
234 KOG2325 Predicted transporter/ 93.7 4.8 0.0001 45.1 18.8 143 11-157 28-177 (488)
235 KOG2532 Permease of the major 93.4 0.31 6.7E-06 54.4 9.0 136 399-574 78-216 (466)
236 COG2211 MelB Na+/melibiose sym 92.9 1.7 3.7E-05 48.4 13.7 90 391-480 43-144 (467)
237 PF03209 PUCC: PUCC protein; 92.6 1.9 4.1E-05 47.0 13.2 128 388-517 7-153 (403)
238 PF00854 PTR2: POT family; In 92.1 0.55 1.2E-05 50.3 8.6 105 433-572 4-121 (372)
239 PF05631 DUF791: Protein of un 92.0 2.7 5.9E-05 45.1 13.3 146 361-517 37-191 (354)
240 PRK03612 spermidine synthase; 91.5 3.2 6.9E-05 47.0 14.2 58 455-514 113-170 (521)
241 COG0738 FucP Fucose permease [ 91.5 2.8 6.1E-05 45.6 12.9 103 406-515 60-166 (422)
242 PF05631 DUF791: Protein of un 90.6 0.61 1.3E-05 49.9 6.8 86 31-129 54-140 (354)
243 PRK11462 putative transporter; 90.5 4.1 8.9E-05 45.1 13.7 50 390-439 39-90 (460)
244 KOG2816 Predicted transporter 90.3 0.88 1.9E-05 50.7 8.0 119 42-168 268-389 (463)
245 KOG4686 Predicted sugar transp 89.3 1.8 3.9E-05 45.2 8.6 154 8-173 259-416 (459)
246 PF05978 UNC-93: Ion channel r 89.1 1.5 3.2E-05 41.6 7.5 86 65-158 52-138 (156)
247 KOG3098 Uncharacterized conser 87.7 3.8 8.3E-05 45.6 10.7 155 8-162 233-405 (461)
248 PF06813 Nodulin-like: Nodulin 87.7 13 0.00028 38.0 13.8 130 368-505 7-148 (250)
249 COG0477 ProP Permeases of the 86.0 3.7 8E-05 40.0 8.6 111 38-153 24-139 (338)
250 KOG3098 Uncharacterized conser 85.8 65 0.0014 36.0 23.6 87 63-157 63-150 (461)
251 PF05978 UNC-93: Ion channel r 85.0 6.3 0.00014 37.3 9.2 103 400-509 43-145 (156)
252 PF03092 BT1: BT1 family; Int 80.7 17 0.00037 40.0 12.0 154 386-576 14-177 (433)
253 TIGR00926 2A1704 Peptide:H+ sy 79.0 5.9 0.00013 46.2 7.9 59 41-99 13-73 (654)
254 PF11947 DUF3464: Protein of u 72.0 3.1 6.6E-05 39.3 2.6 43 454-496 104-147 (153)
255 PF12832 MFS_1_like: MFS_1 lik 68.2 5.6 0.00012 32.9 3.2 43 384-426 23-67 (77)
256 PF12832 MFS_1_like: MFS_1 lik 64.9 9.8 0.00021 31.5 4.0 47 42-89 27-74 (77)
257 KOG0253 Synaptic vesicle trans 63.2 20 0.00043 39.1 6.8 89 68-165 399-490 (528)
258 PF06779 DUF1228: Protein of u 53.3 39 0.00085 28.7 5.7 65 33-97 9-74 (85)
259 KOG3762 Predicted transporter 48.2 28 0.0006 39.6 5.1 182 356-577 366-550 (618)
260 COG4603 ABC-type uncharacteriz 46.1 1.5E+02 0.0032 32.1 10.1 108 454-582 113-223 (356)
261 KOG2325 Predicted transporter/ 44.9 1E+02 0.0022 34.8 8.9 112 362-478 35-156 (488)
262 KOG2563 Permease of the major 41.3 51 0.0011 36.7 5.7 154 4-165 255-411 (480)
263 KOG3626 Organic anion transpor 37.2 96 0.0021 36.7 7.5 75 4-79 381-458 (735)
264 COG3086 RseC Positive regulato 32.5 1.4E+02 0.0031 28.0 6.3 23 560-582 107-129 (150)
265 PF10283 zf-CCHH: Zinc-finger 30.5 18 0.0004 23.7 0.2 10 545-554 2-12 (26)
266 TIGR00939 2a57 Equilibrative N 25.8 9.3E+02 0.02 26.6 14.6 53 109-165 105-157 (437)
267 PF01770 Folate_carrier: Reduc 25.4 5E+02 0.011 28.7 10.2 93 453-579 95-187 (412)
268 PF10225 DUF2215: Uncharacteri 25.1 7.4E+02 0.016 25.2 11.4 36 130-166 52-87 (249)
269 TIGR00769 AAA ADP/ATP carrier 21.8 1.2E+03 0.025 26.3 14.2 42 472-514 149-190 (472)
270 KOG3762 Predicted transporter 21.5 92 0.002 35.6 3.6 52 43-94 38-90 (618)
No 1
>PTZ00207 hypothetical protein; Provisional
Probab=100.00 E-value=4.7e-78 Score=673.42 Aligned_cols=506 Identities=18% Similarity=0.277 Sum_probs=425.0
Q ss_pred cchhHHHHHHHHHHHHhcCcccccccccHHHHhhhCCChhhHHHHHHHHhhhhhcccchhhhhchhhhHHHHHHHHHHHH
Q 007654 12 FNNRWLVFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSVGFLAGSLCEVLPIWGALLVGALQNF 91 (594)
Q Consensus 12 ~~~Rw~~l~a~~~i~l~~Gt~Y~fS~ys~~Lk~~lg~sq~~l~~i~~a~~~G~~~gi~~G~l~D~~gp~~~l~iG~~~~~ 91 (594)
..+||++++++++++.++|+.|.|++|+++|++++|+||+|+++++..+...+.+.+++|.++||+|||.++++|+++.+
T Consensus 23 e~~Rw~~lva~~~~~~~~g~~y~fsv~s~~L~~~lgls~~~l~~i~svg~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~ 102 (591)
T PTZ00207 23 EPRRFALLVLGAFCSICTSFMYAFNLISGAMQARYNLTQRDLSTITTVGIAVGYFLLPYSFIYDYLGPRPIFVLSMTVFC 102 (591)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 47899999999999999999999999999999999999999999865555555667799999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCChhHHHHHHHHHhhccccchhhhhHHHHHHHhcCCCCCceehhhHhhhhhhHHHHHHHHHHhcCC
Q 007654 92 IGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAILTQVYTMIHAP 171 (594)
Q Consensus 92 ~Gy~~~~l~~~g~i~~~s~~~l~~~~~l~g~G~~~~~taal~t~~k~FP~~RG~~~Gl~~a~~GLSa~i~s~i~~~~f~~ 171 (594)
+||+++|+++++.+. .++|+++++.++.|+|++++++++++++++|||++||+++|+.+++.|+|++++++++.+++.+
T Consensus 103 iG~ll~ala~~~~i~-~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~ 181 (591)
T PTZ00207 103 LGTLLFALTFQEVIE-GSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFPSNRGAVVAIMKTFTGLGSAILGSIQLAFFSD 181 (591)
T ss_pred HHHHHHHHHhccccc-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999888774 3799999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHHHHHhhheeecccCCCCc---C---CCCCCC-----------------chhHHHHHHHHHHHHHHH
Q 007654 172 DHANLIFMVAVGPAMVVIALMFIIRPVGGHRQ---V---RPSDSS-----------------SFTFIYSVCLLLAAYLMG 228 (594)
Q Consensus 172 ~~~~fll~la~~~~~v~l~~~~~ir~~~~~~~---~---~~~~~~-----------------~f~~~~~~~~~l~~~l~~ 228 (594)
|.+.+++++++.+..++++...++|.+|+++. + +++|+. +|..++.+++.+++|+++
T Consensus 182 ~~~~~fl~l~vl~~vv~ll~~~~vr~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~yl~~ 261 (591)
T PTZ00207 182 NTSAYFFFLMSFALVVGILAIVFMRLPPFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIVFLPL 261 (591)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhheeCCcchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHHHHHH
Confidence 99999999999999999999999997765432 1 122222 899999999999999999
Q ss_pred HHHhhhccccchhHHHHHHHHHH-HHhhhc-chhhhhhcccccCCChhhhhhcCCCCCCCCCCCCCcchhhhhcccccCC
Q 007654 229 VMLVEDLVDLNHTVIIIFTVILF-VLLFIP-IVIPIILSFFLERTDPAEEALLSKPENMEPGKSNQETDEVILSEVEDEK 306 (594)
Q Consensus 229 ~~~~~~~~~~s~~~~~~~~~i~~-~ll~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (594)
+++++++.+++++.+..++++++ ++++.| +++|++. ....++. + ++ +++ + + +..+++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~v~~~lll~~p~l~ip~~~--~~~~~~~--~----~~---~~~-~----~-----~~~~~~ 320 (591)
T PTZ00207 262 QGALVAYLKLGSNFKVGFAVTVIVLTVIFPFMAFPLTT--FDGKRPH--D----DS---DGK-A----K-----EHVEAG 320 (591)
T ss_pred HHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhhhHHH--hccCCcC--C----Cc---ccc-c----c-----cccccc
Confidence 99999999999998888888777 777888 8888864 2111100 0 00 000 0 0 000000
Q ss_pred CCccCCCchhHHHHHHHHHHHHHHhhhhhhh-hhhhcc-CCCCCCCCCCHHHHhhcHHHHHHHHHHHhhhcchhheecch
Q 007654 307 PKDVDLLPASERRKRIAQLQARLFHAAAEGA-VRVKRR-RGPHRGEDFTLTQALIKADFWLIFFSLLLGSGSGLTVIDNL 384 (594)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~p~~~~d~t~~e~l~t~~Fwll~~~~~~~~g~Gl~vi~n~ 384 (594)
++. + +.+++ .+.+.+ ..|++++ |++|++++.|||++|+.++|+.|+|++++||+
T Consensus 321 ~~~-~---------------------~~~~~~~~~~~~~~~P~~~~--t~~q~l~~~d~Wll~~~~~cg~g~gl~~~~N~ 376 (591)
T PTZ00207 321 EEV-S---------------------AAEDKVVETDVDYIAPQFQE--TFIEGLKTARLWCLLWSIFCCVGAHFVIIFNA 376 (591)
T ss_pred ccc-c---------------------ccccccccccccCCCCCCcc--hHHHHHhchhHHHHHHHHHHhhCchheeeecH
Confidence 000 0 00000 000111 2266554 99999999999999999999999999999999
Q ss_pred HHHHHHh-CCC-cc--hh-HHHHHHHhhhhhcccccchhhhhhhccC----CchhHHHHHHHHHHHHHHHHHhccCc-hh
Q 007654 385 GQMSQSL-GYD-NT--HI-FVSMISIWNFLGRVGGGYFSEIIVRDYA----YPRPVAMAVAQFVMAIGHIFLGMGWP-GA 454 (594)
Q Consensus 385 ~~i~~~~-g~~-~~--~~-~Vsl~si~n~~GRl~~G~lsD~l~r~~~----~~r~~~l~~~~~~~~~~~ll~~~~~~-~~ 454 (594)
+||++++ |++ +. .+ +||++|++|++||+++|++| .+.+++. +||+.++++.++ +.+++++++...| ..
T Consensus 377 ~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~-~~~~~~~~~~r~prt~~l~~~~~-~~~~~lll~~~~p~~~ 454 (591)
T PTZ00207 377 RFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFE-IWSQKRRAEDRVPITIALFIPSV-CIITMLTLFLTLPKAA 454 (591)
T ss_pred HHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHH-HHHHhhccccccchhHHHHHHHH-HHHHHHHHHHHCCccH
Confidence 9999999 773 33 33 89999999999999999999 5555554 999999999988 7778777666555 78
Q ss_pred HHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHHhhhhcccCcccccccccccc
Q 007654 455 MYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYDHEAEKQHQPHHHLLNAGSIF 534 (594)
Q Consensus 455 l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~~~~~~~~~~~~~~~~~~~ 534 (594)
++++++++|+|||+.|+++|++++|+|| ||+|+|||+++++.++|+++||..++|++||++++|+
T Consensus 455 L~~~~~lvg~~~G~~~~~~~~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~-------------- 519 (591)
T PTZ00207 455 LPLPYFIAAFANGFMAATIALVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKL-------------- 519 (591)
T ss_pred hHHHHHHHHHHhhHhHHHHHHHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhC--------------
Confidence 9999999999999999999999999999 9999999999999999999999999999999999763
Q ss_pred cCCCCCCCCCccccCcccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcc
Q 007654 535 TSMPRVDEPLKCEGSICYFLTSMIMSGLCIVAVILSMILVHRTTNVYSHLYGK 587 (594)
Q Consensus 535 ~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~~l~~r~r~~~~~~~~~ 587 (594)
++.+|.|++||+.+|+|++++|++|+++++++|.|+||+|++..+.
T Consensus 520 -------~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~l~~R~r~~y~~~~~~ 565 (591)
T PTZ00207 520 -------GQDVCTERVCVVMPLAFLLGLSFLAFITSTYVHLQYRRLCLKALEE 565 (591)
T ss_pred -------CCCeeCCceeeHhHHHHHHHHHHHHHHHHhheeeehHHHHHHHHHH
Confidence 3569999999999999999999999999999999999999855443
No 2
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=100.00 E-value=5e-56 Score=448.07 Aligned_cols=248 Identities=46% Similarity=0.937 Sum_probs=239.6
Q ss_pred hHHHHHHHHHHHHhcCcccccccccHHHHhhhCCChhhHHHHHHHHhhhhhcccchhhhhchhhhHHHHHHHHHHHHHHH
Q 007654 15 RWLVFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSVGFLAGSLCEVLPIWGALLVGALQNFIGY 94 (594)
Q Consensus 15 Rw~~l~a~~~i~l~~Gt~Y~fS~ys~~Lk~~lg~sq~~l~~i~~a~~~G~~~gi~~G~l~D~~gp~~~l~iG~~~~~~Gy 94 (594)
||+++++++|+|+++|++|.||+|||+||+++|+||+|+|++++++|+|.++|+++|+++|++|||.++++|++++++||
T Consensus 1 rW~~l~a~~~v~~~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G~~~G~l~d~~gp~~~l~iG~~~~~~GY 80 (250)
T PF06813_consen 1 RWLSLVASIWVQLCSGTTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYFGILAGLLYDRFGPWVVLLIGAVLGFVGY 80 (250)
T ss_pred ChhhHHHHHHHHHhcCcccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhccHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCChhHHHHHHHHHhhccccchhhhhHHHHHHHhcCCCCCceehhhHhhhhhhHHHHHHHHHHhcCCChH
Q 007654 95 GWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAILTQVYTMIHAPDHA 174 (594)
Q Consensus 95 ~~~~l~~~g~i~~~s~~~l~~~~~l~g~G~~~~~taal~t~~k~FP~~RG~~~Gl~~a~~GLSa~i~s~i~~~~f~~~~~ 174 (594)
+++|++++++++.+++|++|++.+++++|++|+||++++||+||||++||+|+|++|+++|||++|++++|.++|++|++
T Consensus 81 ~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~~RG~vvgilk~~~GLSaai~t~i~~~~f~~~~~ 160 (250)
T PF06813_consen 81 GLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPRSRGTVVGILKGFFGLSAAIFTQIYSAFFGDDPS 160 (250)
T ss_pred HHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCccccCceehhhhHHHHhHHHHHHHHHHHHcCCChH
Confidence 99999999999877999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhheeecccCC--CCcCCCCCCCchhHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHH
Q 007654 175 NLIFMVAVGPAMVVIALMFIIRPVGG--HRQVRPSDSSSFTFIYSVCLLLAAYLMGVMLVEDLVDLNHTVIIIFTVILFV 252 (594)
Q Consensus 175 ~fll~la~~~~~v~l~~~~~ir~~~~--~~~~~~~~~~~f~~~~~~~~~l~~~l~~~~~~~~~~~~s~~~~~~~~~i~~~ 252 (594)
.|++|+++.|..+++++++++|++|+ .++++++|+++|...+.+++.+++|+++.++++++.+.+++.+...++++++
T Consensus 161 ~fll~la~~~~~v~l~~~~~vr~~~~~~~~~~~~~~~~~F~~~~~i~l~la~yLl~~~i~~~~~~~s~~~~~~~~~il~l 240 (250)
T PF06813_consen 161 SFLLFLAVLPAVVCLVAMFFVRPVPPSPSRTRQPSESKRFLFFFAIALALAIYLLVISILQNFVKLSRAARVIFAVILLL 240 (250)
T ss_pred HHHHHHHHHHHHHHHHHhhheeccCCccccccCcchhHHHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999886 3556677889999999999999999999999999999999998889999999
Q ss_pred Hhhhcchhhh
Q 007654 253 LLFIPIVIPI 262 (594)
Q Consensus 253 ll~~~~~~~~ 262 (594)
++++|+++|+
T Consensus 241 lL~~Pl~i~~ 250 (250)
T PF06813_consen 241 LLLLPLAIPV 250 (250)
T ss_pred HHHhhhhccC
Confidence 9999999884
No 3
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.95 E-value=2.2e-26 Score=240.98 Aligned_cols=370 Identities=22% Similarity=0.296 Sum_probs=264.6
Q ss_pred hhHHHHHHHHHHHHhcCcccccccccHHHHhhhCCChhhHHHHHHHHhhhhhc-ccchhhhhchhhhHHHHHHHHHHHHH
Q 007654 14 NRWLVFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFI 92 (594)
Q Consensus 14 ~Rw~~l~a~~~i~l~~Gt~Y~fS~ys~~Lk~~lg~sq~~l~~i~~a~~~G~~~-gi~~G~l~D~~gp~~~l~iG~~~~~~ 92 (594)
+||..+++.+..+++.|..|+|+.+.|++++++|+|.+|++.+..+..++..+ .++.|.+.||+|+|.++.++.++..+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~ 80 (377)
T TIGR00890 1 RWWYVLVGTVIMCFTSGYVYTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGL 80 (377)
T ss_pred CeEEEeHHHHHHHHHhhHHhhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHH
Confidence 57889999999999999999999999999999999999999987777777754 78899999999999999999998888
Q ss_pred HHHHHHHHHhcCCCChhHHHHHHHHHhhccccchhhhhHHHHHHHhcCCCCCceehhhHhhhhhhHHHHHHHHHHhcCCC
Q 007654 93 GYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAILTQVYTMIHAPD 172 (594)
Q Consensus 93 Gy~~~~l~~~g~i~~~s~~~l~~~~~l~g~G~~~~~taal~t~~k~FP~~RG~~~Gl~~a~~GLSa~i~s~i~~~~f~~~ 172 (594)
|+.++..+ +++|.+.+.-++.|.|.+..+.++.....+|||++||++.++...+.++|+.+..++...+.+..
T Consensus 81 ~~~~~~~~-------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 153 (377)
T TIGR00890 81 GFTFYAIA-------DSLAALYLTYGLASAGVGIAYGIALNTAVKWFPDKRGLASGIIIGGYGLGSFILSPLITSVINLE 153 (377)
T ss_pred HHHHHHHH-------HHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcCcccHHHHHHHHHhcchhHhHHHHHHHHHHhcc
Confidence 87654332 25677666555778888888888888999999999999999999999999877665554221100
Q ss_pred hHHHHHHHHHHHHHHHHhhheeecccCCCCcCCCCCCCchhHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHH
Q 007654 173 HANLIFMVAVGPAMVVIALMFIIRPVGGHRQVRPSDSSSFTFIYSVCLLLAAYLMGVMLVEDLVDLNHTVIIIFTVILFV 252 (594)
Q Consensus 173 ~~~fll~la~~~~~v~l~~~~~ir~~~~~~~~~~~~~~~f~~~~~~~~~l~~~l~~~~~~~~~~~~s~~~~~~~~~i~~~ 252 (594)
+ .... ++... ....+.++
T Consensus 154 --------------------------~------------~~~~---------f~~~~---------------~~~~~~~~ 171 (377)
T TIGR00890 154 --------------------------G------------VPAA---------FIYMG---------------IIFLLVIV 171 (377)
T ss_pred --------------------------c------------HHHH---------HHHHH---------------HHHHHHHH
Confidence 0 0000 00000 00111110
Q ss_pred HhhhcchhhhhhcccccCCChhhhhhcCCCCCCCCCCCCCcchhhhhcccccCCCCccCCCchhHHHHHHHHHHHHHHhh
Q 007654 253 LLFIPIVIPIILSFFLERTDPAEEALLSKPENMEPGKSNQETDEVILSEVEDEKPKDVDLLPASERRKRIAQLQARLFHA 332 (594)
Q Consensus 253 ll~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (594)
++.. +.++++ +++.+ ++++.
T Consensus 172 ~~~~---------~~~~~~------------~~~~~--------------~~~~~------------------------- 191 (377)
T TIGR00890 172 LGAF---------LIGYPP------------GQLIK--------------TNIEV------------------------- 191 (377)
T ss_pred HHHH---------heecCc------------hhccc--------------cCccc-------------------------
Confidence 0000 010000 00000 00000
Q ss_pred hhhhhhhhhccCCCCCCCCCCHHHHhhcHHHHHHHHHHHhhhcchhheecchHHHHHHhCCCcch--hHHHHHHHhhhhh
Q 007654 333 AAEGAVRVKRRRGPHRGEDFTLTQALIKADFWLIFFSLLLGSGSGLTVIDNLGQMSQSLGYDNTH--IFVSMISIWNFLG 410 (594)
Q Consensus 333 ~~~~~~~~~~~~~p~~~~d~t~~e~l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~~~g~~~~~--~~Vsl~si~n~~G 410 (594)
+ .++.+.++.+|++++|++...+++.......+.+...++.+++|.+... ...++.++.+.+|
T Consensus 192 -------------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (377)
T TIGR00890 192 -------------S--VKDYTVWEMLRTPQFWVLYLSFFLNAVSGLLLIGLYKPYGQSLGLSDGFLVLAVSISSIFNGGG 256 (377)
T ss_pred -------------c--hhhhhHHHHHcCccHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Confidence 0 0122346788999999999888887777666667777787888876643 3778899999999
Q ss_pred cccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHhccC--c-hhHHHHHHHHHhhhhhccchhHHHHHHhhccCchh
Q 007654 411 RVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLGMGW--P-GAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFG 487 (594)
Q Consensus 411 Rl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~~~~--~-~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g 487 (594)
|+.+|+++||++||+.. .+...+..++.+++...+ . ..++....+.|+++|..+.+.|.++.|.++.++.|
T Consensus 257 ~~~~g~l~dr~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~ 330 (377)
T TIGR00890 257 RPFLGALSDKIGRQKTM------SIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPANSA 330 (377)
T ss_pred HHHHHHHHHHHhhhhhh------hHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhhhh
Confidence 99999999999885432 233344444443332222 1 22445567889999999999999999999999999
Q ss_pred hhhhHHHhhhhHHHHHHHHHHHHHHHHhhhhcccCcccccccccccccCCCCCCCCCccccCcccHHHHHHHHHHHHHHH
Q 007654 488 ALYNFLTLANPAGSLVFSGLIASYIYDHEAEKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTSMIMSGLCIVAV 567 (594)
Q Consensus 488 ~nyg~~~~a~~~g~~~~~~~l~G~iyd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~ 567 (594)
+.+|+......+|.. ++|.+.|.++|..+ |+..|.+.++++++++
T Consensus 331 ~~~g~~~~~~~~g~~-~~~~~~g~l~~~~g----------------------------------~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 331 ANYGFLYTAKAVAGI-FGGLIASHALTEIG----------------------------------FEYTFIVTGAFALTSL 375 (377)
T ss_pred hHhHHHHHHHHHHHH-HHHHHHHHHHhhhc----------------------------------hhhHHHHHHHHHHHhc
Confidence 999999999989887 58999999998764 8889988887777664
Q ss_pred H
Q 007654 568 I 568 (594)
Q Consensus 568 ~ 568 (594)
+
T Consensus 376 ~ 376 (377)
T TIGR00890 376 A 376 (377)
T ss_pred c
Confidence 3
No 4
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.93 E-value=2.2e-25 Score=247.49 Aligned_cols=424 Identities=19% Similarity=0.254 Sum_probs=296.0
Q ss_pred hHHHHHHHHHH-HHhcCcccccccccHHHHhhhCCChhhHHHH-HHHHhhhhhcccchhhhhchhhhHHHHHHHHHHHHH
Q 007654 15 RWLVFVAAMWI-QSCAGIGYLFGSISPVIKSSLNYNQKQIARL-GVAKDLGDSVGFLAGSLCEVLPIWGALLVGALQNFI 92 (594)
Q Consensus 15 Rw~~l~a~~~i-~l~~Gt~Y~fS~ys~~Lk~~lg~sq~~l~~i-~~a~~~G~~~gi~~G~l~D~~gp~~~l~iG~~~~~~ 92 (594)
-|.+.+++.++ ..+-|-.|.|+++-+.+++.++-+.+|+++| ++...+....|++.+.++||+|.|.+.++|+++.+.
T Consensus 44 gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~ 123 (509)
T KOG2504|consen 44 GWVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAAL 123 (509)
T ss_pred eeeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHH
Confidence 38888888666 5677999999999999999999999999987 555555556699999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCChhHHHHH-HHHHhhccccchhhhhHHHHHHHhcCCCCCceehhhHhhhhhhHHHHHHHHHHhcC-
Q 007654 93 GYGWVWLIVTGRAPVLPLWAMC-ILIFVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAILTQVYTMIHA- 170 (594)
Q Consensus 93 Gy~~~~l~~~g~i~~~s~~~l~-~~~~l~g~G~~~~~taal~t~~k~FP~~RG~~~Gl~~a~~GLSa~i~s~i~~~~f~- 170 (594)
|+.+-..+ .++|+++ .|++++|.|.++.|..+++...++|++||++|+|+..++.|++..+++.+...+++
T Consensus 124 g~~lssF~-------~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~ 196 (509)
T KOG2504|consen 124 GLLLSSFA-------TSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFEKKRALATGIAVSGTGVGTVVFPPLLKYLLSK 196 (509)
T ss_pred HHHHHHHH-------hhHHHHHHHHHHHhhccchhhhcchhhhhhhHhHHHHHHHHhhhhccCCcceeeHHHHHHHHHHH
Confidence 98864322 2589888 59999999999999999999999999999999999999999999999999886663
Q ss_pred -CChHHHHHHHHHHHHHHHHhhheeecccCCCCcCCCCCCCchhHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHH
Q 007654 171 -PDHANLIFMVAVGPAMVVIALMFIIRPVGGHRQVRPSDSSSFTFIYSVCLLLAAYLMGVMLVEDLVDLNHTVIIIFTVI 249 (594)
Q Consensus 171 -~~~~~fll~la~~~~~v~l~~~~~ir~~~~~~~~~~~~~~~f~~~~~~~~~l~~~l~~~~~~~~~~~~s~~~~~~~~~i 249 (594)
+....++.+.++. +..+.+....||...+...+ .+
T Consensus 197 ~G~r~~~l~~~~~~--l~~~~~~~~~rp~~~~~~~~-~~----------------------------------------- 232 (509)
T KOG2504|consen 197 YGWRGALLIFGGIS--LNVLVAGALLRPLSPPKKPN-EE----------------------------------------- 232 (509)
T ss_pred hCcHHHHHHHHHHH--HHHHHHHHHcCCCCcCCCch-hh-----------------------------------------
Confidence 2333333333322 33333333444433221111 00
Q ss_pred HHHHhhhcchhhhhhcccccCCChhhhhhcCCCCCCCCCCCCCcchhhhhcccccCCCCccCCCchhHHHHHHHHHHHHH
Q 007654 250 LFVLLFIPIVIPIILSFFLERTDPAEEALLSKPENMEPGKSNQETDEVILSEVEDEKPKDVDLLPASERRKRIAQLQARL 329 (594)
Q Consensus 250 ~~~ll~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (594)
++ ++.+....++.. .+.....+..+....+ ... ++..
T Consensus 233 --------------------------~~-~~~~~~~~~~~~---~~~~~~~~~~~~~~~~-~~~--~~~~---------- 269 (509)
T KOG2504|consen 233 --------------------------KD-LRNSAASVESTP---KPVELRISERDSGLKK-LSL--SNLA---------- 269 (509)
T ss_pred --------------------------hh-hccccccccccc---cccccccccCCCCCCc-ccc--cchh----------
Confidence 00 000000000000 0000000000000000 000 0000
Q ss_pred HhhhhhhhhhhhccCCCC-CCCCCCHHHHhhcHHHHHHHHHHHhhhcchhheecchHHHHHHhCCCcch--hHHHHHHHh
Q 007654 330 FHAAAEGAVRVKRRRGPH-RGEDFTLTQALIKADFWLIFFSLLLGSGSGLTVIDNLGQMSQSLGYDNTH--IFVSMISIW 406 (594)
Q Consensus 330 ~~~~~~~~~~~~~~~~p~-~~~d~t~~e~l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~~~g~~~~~--~~Vsl~si~ 406 (594)
+.+. .+.+.++.+. ...+.--.+++|++.||++.+...+....-..-...+...++++|++... ..+|++++.
T Consensus 270 ---~~~~-~~~~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~ 345 (509)
T KOG2504|consen 270 ---TLKR-GPDKWRNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVS 345 (509)
T ss_pred ---hhhh-CCccccccchhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHh
Confidence 0000 0000000011 00111135889999999999988888777777777888999999998753 489999999
Q ss_pred hhhhcccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHhc-cCchhHHHHHHHHHhhhhhccchhHHHHHHhhccCc
Q 007654 407 NFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLGM-GWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKK 485 (594)
Q Consensus 407 n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~~-~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~ 485 (594)
|.+||++.|++.|+-.. ++.+...+..++..++.+.... .+...+..-+++.|++.|...++.|.++.|+.|+.+
T Consensus 346 ~i~gRi~~G~laD~~~~----~~~~~~~~~ll~~gl~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~ 421 (509)
T KOG2504|consen 346 DIIGRIILGLLADKPGI----RALVLFLLTLLIAGLARLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEK 421 (509)
T ss_pred hhhhhhhhhhhcCcccc----chHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhh
Confidence 99999999999997652 3334444444444444433333 334578889999999999999999999999999999
Q ss_pred hhhhhhHHHhhhhHHHHHHHHHHHHHHHHhhhhcccCcccccccccccccCCCCCCCCCccccCcccHHHHHHHHHHHHH
Q 007654 486 FGALYNFLTLANPAGSLVFSGLIASYIYDHEAEKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTSMIMSGLCIV 565 (594)
Q Consensus 486 ~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~ 565 (594)
+..-||++....+++..+ +|+++|++||.++ -|..+|+.+++..++
T Consensus 422 l~~a~Gl~l~~~gi~~l~-gpPiag~~~d~tg---------------------------------~Y~~~f~~~g~~~~~ 467 (509)
T KOG2504|consen 422 LSNAYGLLLLFQGIGALV-GPPIAGLLYDITG---------------------------------NYDHAFYFCGLCFLL 467 (509)
T ss_pred cchHHHHHHHHhHHHHHc-CcccceeeeeccC---------------------------------CeeeehhhcChHHHH
Confidence 999999999999999985 8999999999986 499999999988888
Q ss_pred HHHHHHHHH
Q 007654 566 AVILSMILV 574 (594)
Q Consensus 566 a~~ls~~l~ 574 (594)
+.++.+...
T Consensus 468 s~~~~~~~~ 476 (509)
T KOG2504|consen 468 SAVLLLILR 476 (509)
T ss_pred HHHHHHHhH
Confidence 877777666
No 5
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.90 E-value=3.2e-21 Score=211.30 Aligned_cols=422 Identities=15% Similarity=0.164 Sum_probs=247.6
Q ss_pred hhhcchhHHHHHHHHHHHHhcCcc-cccccccHHHHhhhCCChhhHHHHHHHHhhhhh-cccchhhhhchhhhHHHHHHH
Q 007654 9 VSFFNNRWLVFVAAMWIQSCAGIG-YLFGSISPVIKSSLNYNQKQIARLGVAKDLGDS-VGFLAGSLCEVLPIWGALLVG 86 (594)
Q Consensus 9 ~~~~~~Rw~~l~a~~~i~l~~Gt~-Y~fS~ys~~Lk~~lg~sq~~l~~i~~a~~~G~~-~gi~~G~l~D~~gp~~~l~iG 86 (594)
+..++++|..+....+........ +.++..-|.++++ |+|.++.+++.....++.. ..++.|.+.||+|+|.++.++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~ 99 (452)
T PRK11273 21 PTYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAG 99 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHH
Confidence 334445677655555444333322 3467888999988 9999999998666666654 588999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHhhccccchhhhhHHHHHHHhcC-CCCCceehhhHhhhhhhHHHHHHHH
Q 007654 87 ALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVY 165 (594)
Q Consensus 87 ~~~~~~Gy~~~~l~~~g~i~~~s~~~l~~~~~l~g~G~~~~~taal~t~~k~FP-~~RG~~~Gl~~a~~GLSa~i~s~i~ 165 (594)
.++..++...+.+.-.. ..+++.+....++.|.+.+..+........++|| ++||++.|+.-.+.++++.+..++.
T Consensus 100 ~~~~~i~~~~~~~~~~~---~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~ 176 (452)
T PRK11273 100 LILAAAVMLFMGFVPWA---TSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLF 176 (452)
T ss_pred HHHHHHHHHHHHhhhcc---cccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHH
Confidence 88777676654433111 1135555554555566667666666777889997 4599999998777777765555433
Q ss_pred HHhcCCChHHHHHHHHHHHHHHHHhhheeecccCCCCcCCCCCCCchhHHHHHHHHHHHHHHHHHHhhhccccchhHHHH
Q 007654 166 TMIHAPDHANLIFMVAVGPAMVVIALMFIIRPVGGHRQVRPSDSSSFTFIYSVCLLLAAYLMGVMLVEDLVDLNHTVIII 245 (594)
Q Consensus 166 ~~~f~~~~~~fll~la~~~~~v~l~~~~~ir~~~~~~~~~~~~~~~f~~~~~~~~~l~~~l~~~~~~~~~~~~s~~~~~~ 245 (594)
.... ... .+ ....+ ++.+ .
T Consensus 177 ~~~~---------------------~~~----~g------------w~~~f--------~i~~----------------~ 195 (452)
T PRK11273 177 LLGM---------------------AWF----ND------------WHAAL--------YMPA----------------F 195 (452)
T ss_pred HHHH---------------------HHh----cc------------HHHHH--------HHHH----------------H
Confidence 1100 000 00 00000 0000 0
Q ss_pred HHHHHHHHhhhcchhhhhhcccccCCChhhhhhcCCCCCCCCCCCCCcchhhhhcccccCCCCccCCCchhHHHHHHHHH
Q 007654 246 FTVILFVLLFIPIVIPIILSFFLERTDPAEEALLSKPENMEPGKSNQETDEVILSEVEDEKPKDVDLLPASERRKRIAQL 325 (594)
Q Consensus 246 ~~~i~~~ll~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (594)
..++..++... +.++ ++++.. .+++ .+. +++.+++.+
T Consensus 196 ~~~~~~~l~~~---------~~~~--~~~~~~-~~~~--~~~---------------~~~~~~~~~-------------- 232 (452)
T PRK11273 196 AAILVALFAFA---------MMRD--TPQSCG-LPPI--EEY---------------KNDYPDDYN-------------- 232 (452)
T ss_pred HHHHHHHHHHH---------HccC--CHhhcC-CCCh--hhh---------------hhccccccc--------------
Confidence 00000000000 1111 111000 0000 000 000000000
Q ss_pred HHHHHhhhhhhhhhhhccCCCCCCCCCCHHHHhhcHHHHHHHHHHHhhhcchhheecchHHHHHH-hCCCcch--hHHHH
Q 007654 326 QARLFHAAAEGAVRVKRRRGPHRGEDFTLTQALIKADFWLIFFSLLLGSGSGLTVIDNLGQMSQS-LGYDNTH--IFVSM 402 (594)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~p~~~~d~t~~e~l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~~-~g~~~~~--~~Vsl 402 (594)
.+ +.++.+ ..+.-...++|++.+|.+++..++....-..+........++ .|++..+ ...++
T Consensus 233 ----------~~---~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~ 297 (452)
T PRK11273 233 ----------EK---HEQELT--AKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFL 297 (452)
T ss_pred ----------cc---cCCCcc--HHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Confidence 00 000000 001111246789999999888877665444455566666766 5776543 35678
Q ss_pred HHHhhhhhcccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHhc---cCchhHHHHHHHHHhhhhhccchhHHHHHH
Q 007654 403 ISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLGM---GWPGAMYVGTLLIGLGYGAHWAIVPAAASE 479 (594)
Q Consensus 403 ~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~~---~~~~~l~~~~~liG~~~G~~~~l~p~i~s~ 479 (594)
.++++.+|+++.|+++||++++++... ......+..++.+++.. .+...+++...++|....+........+.|
T Consensus 298 ~~~~~~~g~~~~G~l~dr~~~~r~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 374 (452)
T PRK11273 298 YEYAGIPGTLLCGWMSDKVFRGNRGAT---GVFFMTLVTIATIVYWLNPAGNPTVDMACMIVIGFLIYGPVMLIGLHALE 374 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHccCCcchH---HHHHHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 889999999999999999965433221 11112222222222211 122233344455555443333444567789
Q ss_pred hhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHHhhhhcccCcccccccccccccCCCCCCCCCccccCcccHHHHHHH
Q 007654 480 LFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYDHEAEKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTSMIM 559 (594)
Q Consensus 480 ~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f~i~ 559 (594)
.+..+..|+..|+......+|+.+.+|.+.|.++|+.+ |+..|.++
T Consensus 375 ~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g----------------------------------~~~~f~~~ 420 (452)
T PRK11273 375 LAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFG----------------------------------WDGGFMVM 420 (452)
T ss_pred HcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhc----------------------------------chHHHHHH
Confidence 99999999999999776666665457999999999875 89999999
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhhccccc
Q 007654 560 SGLCIVAVILSMILVHRTTNVYSHLYGKSRS 590 (594)
Q Consensus 560 ~~~~~~a~~ls~~l~~r~r~~~~~~~~~~~~ 590 (594)
.+.++++++..+++.+-+||..+|+.+|++.
T Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (452)
T PRK11273 421 IGGSILAVILLIVVMIGEKRHHEELLQKRNG 451 (452)
T ss_pred HHHHHHHHHHHHHHhccccchHHHHHhhhcC
Confidence 9999999999998888888878888877653
No 6
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.89 E-value=3.9e-21 Score=211.19 Aligned_cols=407 Identities=12% Similarity=0.114 Sum_probs=249.4
Q ss_pred hhHHHHHHHHHHHH-hcCcccccccccHHHHhhhCCChhhHHHHHHHHhhhh-hcccchhhhhchhhhHHHHHHHHHHHH
Q 007654 14 NRWLVFVAAMWIQS-CAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGD-SVGFLAGSLCEVLPIWGALLVGALQNF 91 (594)
Q Consensus 14 ~Rw~~l~a~~~i~l-~~Gt~Y~fS~ys~~Lk~~lg~sq~~l~~i~~a~~~G~-~~gi~~G~l~D~~gp~~~l~iG~~~~~ 91 (594)
.||.++.++.+.+. .-+..+.++.+-+++++.+|+|+++...+.....++. ..+++.|.+.||+|+|.+++++.++..
T Consensus 16 ~~w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~ 95 (455)
T TIGR00892 16 WGWVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLAS 95 (455)
T ss_pred cchHHHHHHHHHHHHHHhhhcchhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHH
Confidence 46877777666654 3455578899999999999999999999754444443 457889999999999999998888776
Q ss_pred HHHHHHHHHHhcCCCChhHHHHHH-HHHhhccccchhhhhHHHHHHHhcCCCCCceehhhHhhhhhhHHHHHHHHHHhcC
Q 007654 92 IGYGWVWLIVTGRAPVLPLWAMCI-LIFVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAILTQVYTMIHA 170 (594)
Q Consensus 92 ~Gy~~~~l~~~g~i~~~s~~~l~~-~~~l~g~G~~~~~taal~t~~k~FP~~RG~~~Gl~~a~~GLSa~i~s~i~~~~f~ 170 (594)
++..+.. +.. ++|.++. ..++.|.+.+.....+.....+|||++||++.|+...+.++++.+...+...+.+
T Consensus 96 ~~~~~~~--~~~-----~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~ 168 (455)
T TIGR00892 96 LGMILAS--FSS-----NVIELYLTAGFITGLGLAFNFQPSLTMLGKYFYRRRPLANGLAMAGSPVFLSTLAPLNQYLFE 168 (455)
T ss_pred HHHHHHH--Hhh-----hHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHhhHHHHHHHHHhcccHHHHHHHHHHHHHHH
Confidence 6665432 222 3566553 3455567777655566667789999999999999999999988776554421110
Q ss_pred CChHHHHHHHHHHHHHHHHhhheeecccCCCCcCCCCCCCchhHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHH
Q 007654 171 PDHANLIFMVAVGPAMVVIALMFIIRPVGGHRQVRPSDSSSFTFIYSVCLLLAAYLMGVMLVEDLVDLNHTVIIIFTVIL 250 (594)
Q Consensus 171 ~~~~~fll~la~~~~~v~l~~~~~ir~~~~~~~~~~~~~~~f~~~~~~~~~l~~~l~~~~~~~~~~~~s~~~~~~~~~i~ 250 (594)
. .+ +...+.++ + ...++.
T Consensus 169 ~--------------------------~g------------wr~~f~~~--------~----------------~~~~~~ 186 (455)
T TIGR00892 169 S--------------------------FG------------WRGSFLIL--------G----------------GLLLHC 186 (455)
T ss_pred H--------------------------hC------------hHHHHHHH--------H----------------HHHHHH
Confidence 0 00 00101000 0 000000
Q ss_pred HHHhhhcchhhhhhcccccCCChhhhhhcCCCCCCCCCCCCCcchhhhhcccccCCCCccCCCchhHHHHHHHHHHHHHH
Q 007654 251 FVLLFIPIVIPIILSFFLERTDPAEEALLSKPENMEPGKSNQETDEVILSEVEDEKPKDVDLLPASERRKRIAQLQARLF 330 (594)
Q Consensus 251 ~~ll~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (594)
++..+. .. ++++..+ +++++.++ +.++ +.+ .++.+
T Consensus 187 ~v~~~~----------~~-~~~~~~~---~~~~~~~~----------------~~~~-~~~----~~~~~---------- 221 (455)
T TIGR00892 187 CVCGAL----------MR-PVGPSQR---VSKSKSKE----------------GLPP-DGS----TKKLS---------- 221 (455)
T ss_pred HHHHHH----------hC-CCCcccc---cccccccc----------------cCCC-CCc----ccccc----------
Confidence 000000 00 0000000 00000000 0000 000 00000
Q ss_pred hhhhhhhhhhhccCCCCCCCCCCHHHHhhcHHHHHHHHHHHhhhcchhheecchHHHHHHhCCCcch--hHHHHHHHhhh
Q 007654 331 HAAAEGAVRVKRRRGPHRGEDFTLTQALIKADFWLIFFSLLLGSGSGLTVIDNLGQMSQSLGYDNTH--IFVSMISIWNF 408 (594)
Q Consensus 331 ~~~~~~~~~~~~~~~p~~~~d~t~~e~l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~~~g~~~~~--~~Vsl~si~n~ 408 (594)
... . .++ . .+.-..+.+++++||.+.+..++....-.+....+.++.++.|++... ...++.++.+.
T Consensus 222 -~~~--~---~~~--~---~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~ 290 (455)
T TIGR00892 222 -KKS--T---AEK--I---NRFLDFSLFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAKDKGVDEYEAAFLLSIIGFVDI 290 (455)
T ss_pred -ccc--h---hhh--h---hhhcchHHhcCchHHHHHHHHHHHHHHccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 000 0 000 0 011113688999999888877665555455566777888888887643 47888999999
Q ss_pred hhcccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHh-ccCchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchh
Q 007654 409 LGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLG-MGWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFG 487 (594)
Q Consensus 409 ~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~-~~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g 487 (594)
++|+.+|+++||...++ .|...+.....+..++.++.. ..+...+++..++.|+++|......++++.|.++.++.|
T Consensus 291 ~~~~~~g~l~d~~~~~~--~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g 368 (455)
T TIGR00892 291 FARPSCGLIAGLKWIRP--HVQYLFSFALLFNGLTHLLCALAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFS 368 (455)
T ss_pred HHHHHHHHHhcccccCH--HHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHh
Confidence 99999999999732111 111222222222223322222 233445677888999999999999999999999999999
Q ss_pred hhhhHHHhhhhHHHHHHHHHHHHHHHHhhhhcccCcccccccccccccCCCCCCCCCccccCcccHHHHHHHHHHHHHHH
Q 007654 488 ALYNFLTLANPAGSLVFSGLIASYIYDHEAEKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTSMIMSGLCIVAV 567 (594)
Q Consensus 488 ~nyg~~~~a~~~g~~~~~~~l~G~iyd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~ 567 (594)
+.+|+..+...+|.. ++|.++|.++|..+ -|+..|.+.+++++++.
T Consensus 369 ~~~g~~~~~~~lg~~-igp~i~G~l~~~~g---------------------------------~~~~~f~~~~~~~li~~ 414 (455)
T TIGR00892 369 SAVGLVTIVECCAVL-IGPPLAGRLVDATK---------------------------------NYKYIFYASGSIVVSAG 414 (455)
T ss_pred hHHhHHHHHHHHHHH-ccccceeeeehhcC---------------------------------CcchHHHHhhHHHHHHH
Confidence 999999999999988 59999999999764 37788888777766665
Q ss_pred H----HHHHHHhhhhhhh
Q 007654 568 I----LSMILVHRTTNVY 581 (594)
Q Consensus 568 ~----ls~~l~~r~r~~~ 581 (594)
+ ..+..++++||.-
T Consensus 415 ~~~~~~~~~~~~~~~~~~ 432 (455)
T TIGR00892 415 LFLAIGNYINYRLLAKEQ 432 (455)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 4 3334455555533
No 7
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.88 E-value=2.6e-20 Score=204.98 Aligned_cols=399 Identities=15% Similarity=0.086 Sum_probs=233.1
Q ss_pred cccccccccHHHHhhhCCChhhHHHHHHHHhhhhhc-ccchhhhhchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCChh
Q 007654 31 IGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLP 109 (594)
Q Consensus 31 t~Y~fS~ys~~Lk~~lg~sq~~l~~i~~a~~~G~~~-gi~~G~l~D~~gp~~~l~iG~~~~~~Gy~~~~l~~~g~i~~~s 109 (594)
.-+.+++-.|++++++|+|.+|+.++..+..++..+ .++.|.+.||+|+|.++.++.+...++...+.....+.. .+
T Consensus 44 ~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~--~~ 121 (467)
T PRK09556 44 IRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSGS--VS 121 (467)
T ss_pred HhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhccc--ch
Confidence 456788889999999999999999987777777644 789999999999999988887776555555443333322 35
Q ss_pred HHHHHHHHHhhccccchhhhhHHHHHHHhcC-CCCCceehhhHhhhhhhHHHHHHHHHHhcCCChHHHHHHHHHHHHHHH
Q 007654 110 LWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIHAPDHANLIFMVAVGPAMVV 188 (594)
Q Consensus 110 ~~~l~~~~~l~g~G~~~~~taal~t~~k~FP-~~RG~~~Gl~~a~~GLSa~i~s~i~~~~f~~~~~~fll~la~~~~~v~ 188 (594)
++.+.++-++.|.+.+....+..+...+||| ++||++.|+......+|+++-..+....
T Consensus 122 ~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~-------------------- 181 (467)
T PRK09556 122 LGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWG-------------------- 181 (467)
T ss_pred HHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHH--------------------
Confidence 7877776677777878777888888899998 5699999999888888886654332100
Q ss_pred HhhheeecccCCCCcCCCCCCCchhHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHhhhcchhhhhhcccc
Q 007654 189 IALMFIIRPVGGHRQVRPSDSSSFTFIYSVCLLLAAYLMGVMLVEDLVDLNHTVIIIFTVILFVLLFIPIVIPIILSFFL 268 (594)
Q Consensus 189 l~~~~~ir~~~~~~~~~~~~~~~f~~~~~~~~~l~~~l~~~~~~~~~~~~s~~~~~~~~~i~~~ll~~~~~~~~~~~~~~ 268 (594)
....+ +. ..+. .+ .+.+ ...++..++.+. +.+
T Consensus 182 -~~~~~----~~-------~~~~-~f----------~~~g----------------~~~~~~~i~~~~---------~~~ 213 (467)
T PRK09556 182 -ANYFF----DG-------HVIG-MF----------IFPS----------------IIALIIGFIGLR---------YGS 213 (467)
T ss_pred -HHhhc----cC-------cchh-HH----------HHHH----------------HHHHHHHHHHHH---------hCC
Confidence 00000 00 0000 00 0000 000001000000 011
Q ss_pred cCCChhhhhhcCCCCCCCCCCCCCcchhhhhcccccCCCCccCCCchhHHHHHHHHHHHHHHhhhhhhhhhhhccCCCCC
Q 007654 269 ERTDPAEEALLSKPENMEPGKSNQETDEVILSEVEDEKPKDVDLLPASERRKRIAQLQARLFHAAAEGAVRVKRRRGPHR 348 (594)
Q Consensus 269 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 348 (594)
+++++.+.. + + ++. .++..++ ++. .+++ .+..
T Consensus 214 --~~p~~~~~~-~----~--------~~~-----~~~~~~~-------~~~--------------------~~~~-~~~~ 245 (467)
T PRK09556 214 --DSPEELGWG-K----A--------EEI-----FGEPISE-------EDK--------------------ETES-TDMT 245 (467)
T ss_pred --CChhhcCCC-C----h--------hhc-----ccCccch-------hhh--------------------cccc-ccCc
Confidence 111100000 0 0 000 0000000 000 0000 0000
Q ss_pred CCCCCHHHHhhcHHHHHHHHHHHhhhcchhheecchHHHHHH-hCCCcch--hHHHHHHHhhhhhcccccchhhhhhhcc
Q 007654 349 GEDFTLTQALIKADFWLIFFSLLLGSGSGLTVIDNLGQMSQS-LGYDNTH--IFVSMISIWNFLGRVGGGYFSEIIVRDY 425 (594)
Q Consensus 349 ~~d~t~~e~l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~~-~g~~~~~--~~Vsl~si~n~~GRl~~G~lsD~l~r~~ 425 (594)
..+.-.++++|++.+|.+++..++....-..+...+....++ .|.+..+ ...++..+++.+|++.+|+++||++||+
T Consensus 246 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~ 325 (467)
T PRK09556 246 KWQIFVEYVLKNPVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRR 325 (467)
T ss_pred HHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCc
Confidence 001112347899999999998887666554544455555654 6887653 3667888999999999999999998754
Q ss_pred CCchhHHHHHHHHHHHHHHHHHhc-cCchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhH-HHHH
Q 007654 426 AYPRPVAMAVAQFVMAIGHIFLGM-GWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPA-GSLV 503 (594)
Q Consensus 426 ~~~r~~~l~~~~~~~~~~~ll~~~-~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~-g~~~ 503 (594)
.. .............+++.. .+...+++...++|+...+........+.|.+..++.|+-.|+......+ |+.
T Consensus 326 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~- 400 (467)
T PRK09556 326 AL----VACIALALIIFTLGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDS- 400 (467)
T ss_pred hH----HHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHH-
Confidence 21 111111111111112222 22323445666667543333334446777999999999999999766555 555
Q ss_pred HHHHHHHHHHHhhhhcccCcccccccccccccCCCCCCCCCccccCcccHHHHHHHHHHHHHHHHHHHHHH
Q 007654 504 FSGLIASYIYDHEAEKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTSMIMSGLCIVAVILSMILV 574 (594)
Q Consensus 504 ~~~~l~G~iyd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~~l~ 574 (594)
++|.+.|.+.|.+.+.+. . .. +...-|+..|.+..++++++.++.+.+.
T Consensus 401 ~~~~~~G~i~~~~~~g~~---------------~--~~-----~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 449 (467)
T PRK09556 401 FAKVGLGMIADPTKNGTP---------------I--FG-----YTLTGWAGTFAALDIAAIGCICLMAIVA 449 (467)
T ss_pred HHhhhHHHHhcccccccc---------------c--cc-----ccccChHHHHHHHHHHHHHHHHHHHHHH
Confidence 589999999994321100 0 00 0012399999999999999888887766
No 8
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.87 E-value=4.2e-20 Score=201.47 Aligned_cols=381 Identities=16% Similarity=0.128 Sum_probs=222.9
Q ss_pred CcccccccccHHHHhhhCCChhhHHHHHHHHhhhh-hcccchhhhhchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCh
Q 007654 30 GIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGD-SVGFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVL 108 (594)
Q Consensus 30 Gt~Y~fS~ys~~Lk~~lg~sq~~l~~i~~a~~~G~-~~gi~~G~l~D~~gp~~~l~iG~~~~~~Gy~~~~l~~~g~i~~~ 108 (594)
-..+.++.+-|++++++|+|.+|..++.....++. ...++.|.+.||+|+|.++.++.++..++..++... .
T Consensus 37 ~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-------~ 109 (434)
T PRK11663 37 FTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFS-------S 109 (434)
T ss_pred HhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHH-------h
Confidence 34467888999999999999999999866666666 458899999999999999999988877776654322 2
Q ss_pred hHHHHHHHHHhhccccchhhhhHHHHHHHhcCC-CCCceehhhHhhhhhhHHHHHHHHHHhcCCChHHHHHHHHHHHHHH
Q 007654 109 PLWAMCILIFVGNNGETYFNTAALVSCVQNFPK-SRGPVVGILKGFAGLGGAILTQVYTMIHAPDHANLIFMVAVGPAMV 187 (594)
Q Consensus 109 s~~~l~~~~~l~g~G~~~~~taal~t~~k~FP~-~RG~~~Gl~~a~~GLSa~i~s~i~~~~f~~~~~~fll~la~~~~~v 187 (594)
++|.+++.-++.|.+.+..+.+......+|||+ +||++.|+.-.+.++++.+-..+...+.+.
T Consensus 110 ~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~---------------- 173 (434)
T PRK11663 110 SLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALH---------------- 173 (434)
T ss_pred HHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----------------
Confidence 467666555555666666667777888899985 699999999999888887665443211100
Q ss_pred HHhhheeecccCCCCcCCCCCCCchhHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHhhhcchhhhhhccc
Q 007654 188 VIALMFIIRPVGGHRQVRPSDSSSFTFIYSVCLLLAAYLMGVMLVEDLVDLNHTVIIIFTVILFVLLFIPIVIPIILSFF 267 (594)
Q Consensus 188 ~l~~~~~ir~~~~~~~~~~~~~~~f~~~~~~~~~l~~~l~~~~~~~~~~~~s~~~~~~~~~i~~~ll~~~~~~~~~~~~~ 267 (594)
.+....+. ..+++.++.... + .-+.
T Consensus 174 ------------------------------------------------~gw~~~f~-~~~i~~~~~~~~-~-----~~~~ 198 (434)
T PRK11663 174 ------------------------------------------------YGWRYGMM-IAGIIAIVVGLF-L-----CWRL 198 (434)
T ss_pred ------------------------------------------------ccHHHHHH-HHHHHHHHHHHH-H-----HHHc
Confidence 00000000 000000000000 0 0011
Q ss_pred ccCCChhhhhhcCCCCCCCCCCCCCcchhhhhcccccCCCCccCCCchhHHHHHHHHHHHHHHhhhhhhhhhhhccCCCC
Q 007654 268 LERTDPAEEALLSKPENMEPGKSNQETDEVILSEVEDEKPKDVDLLPASERRKRIAQLQARLFHAAAEGAVRVKRRRGPH 347 (594)
Q Consensus 268 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 347 (594)
++ ++++. +.++.++.+ ++.+ +.+ . +++..+.
T Consensus 199 ~~--~p~~~---~~~~~~~~~--------------~~~~--~~~----~------------------------~~~~~~~ 229 (434)
T PRK11663 199 RD--KPQAM---GLPSVGEWR--------------HDAL--ELA----Q------------------------QQEGAGL 229 (434)
T ss_pred CC--CHhhc---CCCCccccc--------------cccc--ccc----h------------------------hccccCC
Confidence 11 11000 000000000 0000 000 0 0000000
Q ss_pred CCCCCCHHHHhhcHHHHHHHHHHHhhhcchhheecchHHHHH-HhCCCcch--hHHHHHHHhhhhhcccccchhhhhhhc
Q 007654 348 RGEDFTLTQALIKADFWLIFFSLLLGSGSGLTVIDNLGQMSQ-SLGYDNTH--IFVSMISIWNFLGRVGGGYFSEIIVRD 424 (594)
Q Consensus 348 ~~~d~t~~e~l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~-~~g~~~~~--~~Vsl~si~n~~GRl~~G~lsD~l~r~ 424 (594)
.-.+.-....+|++.+|++.+.+++....-..+.+.+.++.+ +.|++... ...+++.+++.+||+++|+++||+.++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~ 309 (434)
T PRK11663 230 SRKEILTKYVLLNPYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNG 309 (434)
T ss_pred ChhhhHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccC
Confidence 000110123568899999887766544433333344555563 46887653 378899999999999999999999554
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHH
Q 007654 425 YAYPRPVAMAVAQFVMAIGHIFLGMGWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVF 504 (594)
Q Consensus 425 ~~~~r~~~l~~~~~~~~~~~ll~~~~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~ 504 (594)
++.+......+...+..+..+++...+...++....++|+...+...+....++|.|+.++.|+-.|+.....-+|.. +
T Consensus 310 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~-~ 388 (434)
T PRK11663 310 NRGPMNLIFAAGILLSVGSLWLMPFASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAA-L 388 (434)
T ss_pred CccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHH-H
Confidence 322211121222222221111111112222222333334332223345567789999999999999999988888887 5
Q ss_pred HHHHHHHHHHhhhhcccCcccccccccccccCCCCCCCCCccccCcccHHHHHHHHHHHHHHHHHHHH
Q 007654 505 SGLIASYIYDHEAEKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTSMIMSGLCIVAVILSMI 572 (594)
Q Consensus 505 ~~~l~G~iyd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~~ 572 (594)
+|.+.|.+.|+.+ |+..|.+.+++++++.+..+.
T Consensus 389 ~p~~~g~l~~~~g----------------------------------~~~~f~~~~~~~~~~~~~~~~ 422 (434)
T PRK11663 389 SGYPLAKVLEIWH----------------------------------WTGFFVVISIAAGISALLLLP 422 (434)
T ss_pred hcccHHHHHHhcc----------------------------------cHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999764 888999988888777665543
No 9
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.87 E-value=6.1e-20 Score=197.66 Aligned_cols=365 Identities=12% Similarity=0.048 Sum_probs=237.4
Q ss_pred HHHHHHhcCcc-cccccccHHHHhhhCCChhhHHHHHHHHhhhh-hcccchhhhhchhhhHHHHHHHHHHHHHHHHHHHH
Q 007654 22 AMWIQSCAGIG-YLFGSISPVIKSSLNYNQKQIARLGVAKDLGD-SVGFLAGSLCEVLPIWGALLVGALQNFIGYGWVWL 99 (594)
Q Consensus 22 ~~~i~l~~Gt~-Y~fS~ys~~Lk~~lg~sq~~l~~i~~a~~~G~-~~gi~~G~l~D~~gp~~~l~iG~~~~~~Gy~~~~l 99 (594)
..++.+..... +..+...|++++++|+|.+|..++.....++. ...++.|.+.||+|+|.++.+|.++..+|..+..
T Consensus 14 ~~~~~~~~~~~~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~- 92 (393)
T PRK09705 14 LVLIGLNMRPLLTSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRE- 92 (393)
T ss_pred HHHHHHHcchhhhccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHH-
Confidence 44444444433 56899999999999999999999766666665 4478999999999999999999999888888643
Q ss_pred HHhcCCCChhHHHHHHHHHhhccccchhhhhHHHHHHHhcCCCCCceehhhHhhhhhhHHHHHHHHHHhcCCChHHHHHH
Q 007654 100 IVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAILTQVYTMIHAPDHANLIFM 179 (594)
Q Consensus 100 ~~~g~i~~~s~~~l~~~~~l~g~G~~~~~taal~t~~k~FP~~RG~~~Gl~~a~~GLSa~i~s~i~~~~f~~~~~~fll~ 179 (594)
..+ +++.+.+.-++.|.|.+..+........++||++||++.|+..++..+|+.+-..+....-+
T Consensus 93 ----~a~--~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~--------- 157 (393)
T PRK09705 93 ----LYP--QSALLLSSALLGGVGIGIIQAVMPSVIKRRFQQRTPLVMGLWSAALMGGGGLGAAITPWLVQ--------- 157 (393)
T ss_pred ----HCc--chHHHHHHHHHHHhHHHHHhhhhhHHHHHHccccchhHHHHHHHHHHHHHHHHHHHHHHHHH---------
Confidence 222 46666667788888888887777777778999999999999877666665544433210000
Q ss_pred HHHHHHHHHHhhheeecccCCCCcCCCCCCCchhHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHhhhcch
Q 007654 180 VAVGPAMVVIALMFIIRPVGGHRQVRPSDSSSFTFIYSVCLLLAAYLMGVMLVEDLVDLNHTVIIIFTVILFVLLFIPIV 259 (594)
Q Consensus 180 la~~~~~v~l~~~~~ir~~~~~~~~~~~~~~~f~~~~~~~~~l~~~l~~~~~~~~~~~~s~~~~~~~~~i~~~ll~~~~~ 259 (594)
. .. +....+ ..+++..++.+.. .
T Consensus 158 -------------~----~~-------------------------------------~w~~~~-~~~~~~~~~~~~~--~ 180 (393)
T PRK09705 158 -------------H----SE-------------------------------------TWYQTL-AWWALPAVVALFA--W 180 (393)
T ss_pred -------------h----cC-------------------------------------CHHHHH-HHHHHHHHHHHHH--H
Confidence 0 00 000000 0000000000000 0
Q ss_pred hhhhhcccccCCChhhhhhcCCCCCCCCCCCCCcchhhhhcccccCCCCccCCCchhHHHHHHHHHHHHHHhhhhhhhhh
Q 007654 260 IPIILSFFLERTDPAEEALLSKPENMEPGKSNQETDEVILSEVEDEKPKDVDLLPASERRKRIAQLQARLFHAAAEGAVR 339 (594)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (594)
.+. .+++ | +++ ++
T Consensus 181 ~~~------~~~~---------~-~~~------------------~~--------------------------------- 193 (393)
T PRK09705 181 WWQ------SARE---------V-ASS------------------HK--------------------------------- 193 (393)
T ss_pred HHH------hcCC---------C-ccc------------------cC---------------------------------
Confidence 000 0000 0 000 00
Q ss_pred hhccCCCCCCCCCCHHHHhhcHHHHHHHHHHHhhhcchhheecchHHHHHHhCCCcch--hHHHHHHHhhhhhcccccch
Q 007654 340 VKRRRGPHRGEDFTLTQALIKADFWLIFFSLLLGSGSGLTVIDNLGQMSQSLGYDNTH--IFVSMISIWNFLGRVGGGYF 417 (594)
Q Consensus 340 ~~~~~~p~~~~d~t~~e~l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~~~g~~~~~--~~Vsl~si~n~~GRl~~G~l 417 (594)
+ + .+.++.+|++++|.+.+.+++....-..+.+...++.++.|.+..+ ...+++++++.+||+.+|++
T Consensus 194 -~----~-----~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l 263 (393)
T PRK09705 194 -T----T-----TTPVRVVFTPRAWTLGVYFGLINGGYASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAM 263 (393)
T ss_pred -C----C-----cCCcccccCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 0 0 0112456788999988877666555556667788888888877653 47899999999999999999
Q ss_pred hhhhhhccCCchhHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHhhhhhccchhHHHHHHhhc-cCchhhhhhHHHhh
Q 007654 418 SEIIVRDYAYPRPVAMAVAQFVMAIGHIFLGMGWPGAMYVGTLLIGLGYGAHWAIVPAAASELFG-LKKFGALYNFLTLA 496 (594)
Q Consensus 418 sD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~~~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG-~k~~g~nyg~~~~a 496 (594)
+||++|++.. .....+..++.+++...++....+...+.|++.|..+......+.+.+. .++-|+.+|+....
T Consensus 264 ~~r~~~~~~~------~~~~~l~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 337 (393)
T PRK09705 264 ARHQDRRKLL------MLALVLQLVGFCGFIWLPLQLPVLWAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGI 337 (393)
T ss_pred HhhccchHHH------HHHHHHHHHHHHHHHHccchHHHHHHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHH
Confidence 9998774321 2223333344333221121111223456788888888877777788886 45679999998877
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhcccCcccccccccccccCCCCCCCCCccccCcccHHHHHHHHHHHHHHHHHHHHHHhh
Q 007654 497 NPAGSLVFSGLIASYIYDHEAEKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTSMIMSGLCIVAVILSMILVHR 576 (594)
Q Consensus 497 ~~~g~~~~~~~l~G~iyd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~~l~~r 576 (594)
..+++. ++|.+.|.+.|..| -|...|.+.++.++++.+..+++..+
T Consensus 338 ~~~~~~-~gp~~~G~l~~~~g---------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (393)
T PRK09705 338 GFIIAG-LAPWFSGVLRSISG---------------------------------NYLMDWAFHALCVVGLMIITLRFAPA 383 (393)
T ss_pred HHHHHH-HHHHHHHHHHHHhC---------------------------------CchHHHHHHHHHHHHHHHHHHHhccc
Confidence 777777 59999999999876 48999999998888776666554333
No 10
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.86 E-value=5.5e-20 Score=203.32 Aligned_cols=392 Identities=16% Similarity=0.239 Sum_probs=223.6
Q ss_pred hHHHHHHHHHHHHhcCcccccccccHHHHhhhCCChhhHHHHHHHHhhhhhc-ccchhhhhchhhhHHHHHHHHHHHHHH
Q 007654 15 RWLVFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIG 93 (594)
Q Consensus 15 Rw~~l~a~~~i~l~~Gt~Y~fS~ys~~Lk~~lg~sq~~l~~i~~a~~~G~~~-gi~~G~l~D~~gp~~~l~iG~~~~~~G 93 (594)
+|..........+..-..|.++.+.+.+++++|+|.+|.+++.....++..+ .++.|.+.||+|+|.++.++.+...++
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~ 114 (476)
T PLN00028 35 MRAFHLSWISFFTCFVSTFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPA 114 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHH
Confidence 3445555455555555678899999999999999999999987777777765 589999999999999998888877666
Q ss_pred HHHHHHHHhcCCCChhHHHHHHHHHhhccccchhhhhHHHHHHHhcC-CCCCceehhhHhhhhhhHHHHHHHHHHhcCCC
Q 007654 94 YGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIHAPD 172 (594)
Q Consensus 94 y~~~~l~~~g~i~~~s~~~l~~~~~l~g~G~~~~~taal~t~~k~FP-~~RG~~~Gl~~a~~GLSa~i~s~i~~~~f~~~ 172 (594)
..+..+ .+ +++.+.+..++.|.+.+.. ..+.....++|| ++||++.|+..+...+++.+-..+..
T Consensus 115 ~~~~~~-----~~--s~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~------ 180 (476)
T PLN00028 115 VFCMSL-----VS--SATGFIAVRFFIGFSLATF-VSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMP------ 180 (476)
T ss_pred HHHHHH-----hc--CHHHHHHHHHHHHHHHHhh-HHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHH------
Confidence 554322 12 3455544444445544432 333444568898 57999999987655555544322221
Q ss_pred hHHHHHHHHHHHHHHHHhhheeecccCCCCcCCCCCCCchhHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHH
Q 007654 173 HANLIFMVAVGPAMVVIALMFIIRPVGGHRQVRPSDSSSFTFIYSVCLLLAAYLMGVMLVEDLVDLNHTVIIIFTVILFV 252 (594)
Q Consensus 173 ~~~fll~la~~~~~v~l~~~~~ir~~~~~~~~~~~~~~~f~~~~~~~~~l~~~l~~~~~~~~~~~~s~~~~~~~~~i~~~ 252 (594)
.+...+... . ..+.......+.+ .+ .+.++..+
T Consensus 181 ------------~i~~~~~~~-----~------~~~~~gWr~~f~i--------~g----------------~l~l~~~l 213 (476)
T PLN00028 181 ------------LVFPLIKDA-----G------APSFTAWRIAFFV--------PG----------------LLHIIMGI 213 (476)
T ss_pred ------------HHHHHHHhc-----C------CcchhhhHHHHHH--------HH----------------HHHHHHHH
Confidence 000000000 0 0000001111100 00 00000110
Q ss_pred HhhhcchhhhhhcccccCCChhhhhhcCCCCCCCCCCCCCcchhhhhcccccCCCCccCCCchhHHHHHHHHHHHHHHhh
Q 007654 253 LLFIPIVIPIILSFFLERTDPAEEALLSKPENMEPGKSNQETDEVILSEVEDEKPKDVDLLPASERRKRIAQLQARLFHA 332 (594)
Q Consensus 253 ll~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (594)
+... +.+ +++ +++. + +.+++. +
T Consensus 214 ~~~~---------~~~--~~p----------~~~~-------~-----~~~~~~--~----------------------- 235 (476)
T PLN00028 214 LVLT---------LGQ--DLP----------DGNY-------R-----ELKKSG--T----------------------- 235 (476)
T ss_pred HHHH---------HcC--cCC----------CCch-------h-----hHHhcC--c-----------------------
Confidence 0000 000 000 0000 0 000000 0
Q ss_pred hhhhhhhhhccCCCCCCCCCCHHHHhhcHHHHHHHHHHHhhhcchhheecchHHHHHH-hCCCcch--hHHHHHHHhhhh
Q 007654 333 AAEGAVRVKRRRGPHRGEDFTLTQALIKADFWLIFFSLLLGSGSGLTVIDNLGQMSQS-LGYDNTH--IFVSMISIWNFL 409 (594)
Q Consensus 333 ~~~~~~~~~~~~~p~~~~d~t~~e~l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~~-~g~~~~~--~~Vsl~si~n~~ 409 (594)
. ++......+++.++++++|++++.+++..+....+.+.+.+..++ .|.+... ...+++.+++.+
T Consensus 236 --------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~i 303 (476)
T PLN00028 236 --------M----PKDSFSKVLRYGVTNYRTWILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLF 303 (476)
T ss_pred --------c----ccccHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 0 000001235678999999999998877766666666556666554 5887643 377899999999
Q ss_pred hcccccchhhhhhhccCCc-hhHHHHHHHHHHHHHHHHHhcc-CchhHHHHHHHHHh----hhhhccchhHHHHHHhhcc
Q 007654 410 GRVGGGYFSEIIVRDYAYP-RPVAMAVAQFVMAIGHIFLGMG-WPGAMYVGTLLIGL----GYGAHWAIVPAAASELFGL 483 (594)
Q Consensus 410 GRl~~G~lsD~l~r~~~~~-r~~~l~~~~~~~~~~~ll~~~~-~~~~l~~~~~liG~----~~G~~~~l~p~i~s~~FG~ 483 (594)
||+++|+++||++||+... |.+...+...+..+.++++... +.....+..++.++ +.|..+++.| + ++.
T Consensus 304 g~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~----~-~~~ 378 (476)
T PLN00028 304 ARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRANSLGAAIVVMILFSIFVQAACGATFGIVP----F-VSR 378 (476)
T ss_pred HHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHhhhhhcccCc----c-cCh
Confidence 9999999999999875432 4444444444443333333222 22222223333344 4555565555 3 356
Q ss_pred CchhhhhhHHHhhhhHHHHHHHHHHHHHHHHhhhhcccCcccccccccccccCCCCCCCCCccccCcccHHHHHHHHHHH
Q 007654 484 KKFGALYNFLTLANPAGSLVFSGLIASYIYDHEAEKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTSMIMSGLC 563 (594)
Q Consensus 484 k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~ 563 (594)
|+.|+++|++..+..+|+. +.+.++|.++ ...|+.+|++.+++.
T Consensus 379 ~~~g~~~g~~~~~g~lg~~-----i~~~l~~~~~-------------------------------~~~y~~~f~~~~~~~ 422 (476)
T PLN00028 379 RSLGVISGLTGAGGNVGAV-----LTQLLFFTGS-------------------------------SYSTETGISLMGVMI 422 (476)
T ss_pred hhchhhhhhhhccccHHHH-----HHHHHHHhcC-------------------------------CccHhhHHHHHHHHH
Confidence 8999999998766555544 4455566332 015999999999999
Q ss_pred HHHHHHHHHHHhhhh
Q 007654 564 IVAVILSMILVHRTT 578 (594)
Q Consensus 564 ~~a~~ls~~l~~r~r 578 (594)
+++.++.++++..++
T Consensus 423 ~i~~~~~~~~~~~~~ 437 (476)
T PLN00028 423 IACTLPVAFIHFPQW 437 (476)
T ss_pred HHHHHHHHheeccch
Confidence 999888888764433
No 11
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.85 E-value=1.4e-19 Score=189.63 Aligned_cols=381 Identities=15% Similarity=0.125 Sum_probs=238.8
Q ss_pred ccccccccHHHHhhhCCChhhHHHHHHHHhhhhh-cccchhhhhchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCChhH
Q 007654 32 GYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDS-VGFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPL 110 (594)
Q Consensus 32 ~Y~fS~ys~~Lk~~lg~sq~~l~~i~~a~~~G~~-~gi~~G~l~D~~gp~~~l~iG~~~~~~Gy~~~~l~~~g~i~~~s~ 110 (594)
.+.++...|.+++++|+|..+...+.....++.. ..++.|.+.||+|+|.++.++.+...++..++... . ++
T Consensus 10 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~--~-----~~ 82 (399)
T TIGR00893 10 RANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFA--G-----AY 82 (399)
T ss_pred HHhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHH--c-----CH
Confidence 4577888899999999999999998777777764 47899999999999999999988877777665432 1 46
Q ss_pred HHHHHHHHhhccccchhhhhHHHHHHHhcC-CCCCceehhhHhhhhhhHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHH
Q 007654 111 WAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIHAPDHANLIFMVAVGPAMVVI 189 (594)
Q Consensus 111 ~~l~~~~~l~g~G~~~~~taal~t~~k~FP-~~RG~~~Gl~~a~~GLSa~i~s~i~~~~f~~~~~~fll~la~~~~~v~l 189 (594)
|.+.+..++.|.|.+...++......+++| ++||++.|+.....+++..+-..+...+.+..
T Consensus 83 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~----------------- 145 (399)
T TIGR00893 83 VSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHF----------------- 145 (399)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhC-----------------
Confidence 777777777788888888888888999998 56999999999888888876654443111000
Q ss_pred hhheeecccCCCCcCCCCCCCchhHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHhhhcchhhhhhccccc
Q 007654 190 ALMFIIRPVGGHRQVRPSDSSSFTFIYSVCLLLAAYLMGVMLVEDLVDLNHTVIIIFTVILFVLLFIPIVIPIILSFFLE 269 (594)
Q Consensus 190 ~~~~~ir~~~~~~~~~~~~~~~f~~~~~~~~~l~~~l~~~~~~~~~~~~s~~~~~~~~~i~~~ll~~~~~~~~~~~~~~~ 269 (594)
+ ....+.+ .. ....+..++... +.++
T Consensus 146 ---------~------------~~~~~~~---------~~---------------~~~~~~~~~~~~---------~~~~ 171 (399)
T TIGR00893 146 ---------S------------WQWAFII---------EG---------------VLGIIWGVLWLK---------FIPD 171 (399)
T ss_pred ---------C------------chHHHHH---------HH---------------HHHHHHHHHhhh---------eecC
Confidence 0 0000000 00 000000000000 0110
Q ss_pred CCChhhhhhcCCCCCCCCCCCCCcchhhhhcccccCCCCccCCCchhHHHHHHHHHHHHHHhhhhhhhhhhhccCCCCCC
Q 007654 270 RTDPAEEALLSKPENMEPGKSNQETDEVILSEVEDEKPKDVDLLPASERRKRIAQLQARLFHAAAEGAVRVKRRRGPHRG 349 (594)
Q Consensus 270 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 349 (594)
++++ + +..+ +++ + +++..+. +. + . .+ +++++.
T Consensus 172 ~~~~--------~-~~~~------~~~--~---~~~~~~~--------~~-------------~----~-~~--~~~~~~ 203 (399)
T TIGR00893 172 PPQK--------A-KWLT------EEE--K---YIVVGGL--------LA-------------E----Q-QG--KGPSTP 203 (399)
T ss_pred CCCc--------c-ccCC------HHH--H---hhcchhh--------cc-------------c----c-cc--ccccCC
Confidence 0000 0 0000 000 0 0000000 00 0 0 00 001111
Q ss_pred CCCCHHHHhhcHHHHHHHHHHHhhhcchhheecchHHHHHH-hCCCcch--hHHHHHHHhhhhhcccccchhhhhhhccC
Q 007654 350 EDFTLTQALIKADFWLIFFSLLLGSGSGLTVIDNLGQMSQS-LGYDNTH--IFVSMISIWNFLGRVGGGYFSEIIVRDYA 426 (594)
Q Consensus 350 ~d~t~~e~l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~~-~g~~~~~--~~Vsl~si~n~~GRl~~G~lsD~l~r~~~ 426 (594)
...+.++.+|++++|.+.+..++.......+.....+..++ .|.+..+ ...++..+.+.+|++.+|+++||++||+.
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 283 (399)
T TIGR00893 204 KKYQIKELLKDRRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGK 283 (399)
T ss_pred CccchHHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 23456889999999999998888877777777777777765 5766543 36788899999999999999999998752
Q ss_pred CchhHHHHHHHHHHHHHHHHHhcc--CchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHH
Q 007654 427 YPRPVAMAVAQFVMAIGHIFLGMG--WPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVF 504 (594)
Q Consensus 427 ~~r~~~l~~~~~~~~~~~ll~~~~--~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~ 504 (594)
................+...+... +.....+...+++....+.......+++|.+..++.|+.+|+......+|.. +
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~-~ 362 (399)
T TIGR00893 284 SLVFARKTAIIAGLVLSLLMFATNYVNIPYAALALVALGFFGLGAGAIGWALISDNAPGNIAGLTGGLINSLGNLGGI-V 362 (399)
T ss_pred chhHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHhchhhhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhh-h
Confidence 110000011111111111111111 1222333333344333337888889999999999999999999998888887 5
Q ss_pred HHHHHHHHHHhhhhcccCcccccccccccccCCCCCCCCCccccCcccHHHHHHHHHHHHHHHHHHHH
Q 007654 505 SGLIASYIYDHEAEKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTSMIMSGLCIVAVILSMI 572 (594)
Q Consensus 505 ~~~l~G~iyd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~~ 572 (594)
+|.+.|.++|..+ .|+..|.+.++.++++.++.++
T Consensus 363 ~~~i~g~l~~~~g---------------------------------~~~~~~~~~~~~~~~~~~~~~~ 397 (399)
T TIGR00893 363 GPIVIGAIAATTG---------------------------------SFAGALMVVAALALIGALSYLL 397 (399)
T ss_pred hhHHhhhhccCCC---------------------------------chhHHHHHHHHHHHHHHHHHHH
Confidence 8999999999764 4888999988888887766654
No 12
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.85 E-value=2.3e-19 Score=192.51 Aligned_cols=384 Identities=14% Similarity=0.066 Sum_probs=246.2
Q ss_pred hhcchhHHHHHHHHHHHHhcCc-ccccccccHHHHhhhCCChhhHHHHHHHHhhhhhc-ccchhhhhchhhhHHHHHHHH
Q 007654 10 SFFNNRWLVFVAAMWIQSCAGI-GYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGA 87 (594)
Q Consensus 10 ~~~~~Rw~~l~a~~~i~l~~Gt-~Y~fS~ys~~Lk~~lg~sq~~l~~i~~a~~~G~~~-gi~~G~l~D~~gp~~~l~iG~ 87 (594)
++.+++|.++..+.++..+.+. .+.++...|++++++|+|.+|.+.+.....++..+ .++.|.+.||+|+|.++.++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~ 87 (406)
T PRK11551 8 ASSSRLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSV 87 (406)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHH
Confidence 5566899988888888877665 57889999999999999999999987777777755 788999999999999999998
Q ss_pred HHHHHHHHHHHHHHhcCCCChhHHHHHHHHHhhccccchhhhhHHHHHHHhcC-CCCCceehhhHhhhhhhHHHHHHHHH
Q 007654 88 LQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYT 166 (594)
Q Consensus 88 ~~~~~Gy~~~~l~~~g~i~~~s~~~l~~~~~l~g~G~~~~~taal~t~~k~FP-~~RG~~~Gl~~a~~GLSa~i~s~i~~ 166 (594)
++..++..+..+. .+++.+.+..++.|.+.+..++.......++|| ++||++.|+...+..+++.+-..+..
T Consensus 88 ~~~~~~~~~~~~~-------~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~ 160 (406)
T PRK11551 88 ALFGLFSLATAQA-------WDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGV 160 (406)
T ss_pred HHHHHHHHHHHHh-------ccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8776666543321 246666666677778888888888888899997 57999999988888777765543331
Q ss_pred HhcCCChHHHHHHHHHHHHHHHHhhheeecccCCCCcCCCCCCCchhHHHHHHHHHHHHHHHHHHhhhccccchhHHHHH
Q 007654 167 MIHAPDHANLIFMVAVGPAMVVIALMFIIRPVGGHRQVRPSDSSSFTFIYSVCLLLAAYLMGVMLVEDLVDLNHTVIIIF 246 (594)
Q Consensus 167 ~~f~~~~~~fll~la~~~~~v~l~~~~~ir~~~~~~~~~~~~~~~f~~~~~~~~~l~~~l~~~~~~~~~~~~s~~~~~~~ 246 (594)
...+ ..+ ....+.+ .. ..
T Consensus 161 ~~~~--------------------------~~~------------~~~~~~~---------~~---------------~~ 178 (406)
T PRK11551 161 LAAG--------------------------DAA------------WRHIFYV---------GG---------------VG 178 (406)
T ss_pred HHcc--------------------------ccC------------HHHHHHH---------HH---------------HH
Confidence 1100 000 0000000 00 00
Q ss_pred HHHHHHHhhhcchhhhhhcccccCCChhhhhhcCCCCCCCCCCCCCcchhhhhcccccCCCCccCCCchhHHHHHHHHHH
Q 007654 247 TVILFVLLFIPIVIPIILSFFLERTDPAEEALLSKPENMEPGKSNQETDEVILSEVEDEKPKDVDLLPASERRKRIAQLQ 326 (594)
Q Consensus 247 ~~i~~~ll~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (594)
.++.+++... +.++++++. . + +++ +++++ + .
T Consensus 179 ~~~~~~~~~~---------~l~~~~~~~--~---~--~~~----------------~~~~~--------~--~------- 209 (406)
T PRK11551 179 PLLLVPLLMR---------WLPESRAFA--Q---A--AGA----------------GKQRA--------P--V------- 209 (406)
T ss_pred HHHHHHHHHH---------hCCCChhHH--h---c--cCc----------------chhhh--------h--h-------
Confidence 0000000000 111110000 0 0 000 00000 0 0
Q ss_pred HHHHhhhhhhhhhhhccCCCCCCCCCCHHHHhhcHHHHHHHHHHHhhhcchhheecchHHHHHHhCCCcch--hHHHHHH
Q 007654 327 ARLFHAAAEGAVRVKRRRGPHRGEDFTLTQALIKADFWLIFFSLLLGSGSGLTVIDNLGQMSQSLGYDNTH--IFVSMIS 404 (594)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~p~~~~d~t~~e~l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~~~g~~~~~--~~Vsl~s 404 (594)
.+... +-.+.+..|.++..+++....-..+.+...++.++.|.+... ...++.+
T Consensus 210 -----------~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~ 265 (406)
T PRK11551 210 -----------LRALF-------------GEGRATATLLLWISYFFTLIVLYFLLNWLPSLLVGQGLSRSQAGLVQIAFN 265 (406)
T ss_pred -----------HHHHh-------------hhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChhhhhHHHHHHH
Confidence 00000 000112334444444444333344555667777888877643 4678889
Q ss_pred HhhhhhcccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHh-ccCchhHHHHHHHHHhhhhhccchhHHHHHHhhcc
Q 007654 405 IWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLG-MGWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGL 483 (594)
Q Consensus 405 i~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~-~~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~ 483 (594)
+++.+|++.+|+++||++|++.. ........++.+++. ......+++...+.|++.++.....+.++.|.+..
T Consensus 266 ~~~~~~~~~~g~l~dr~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~ 339 (406)
T PRK11551 266 IGGALGSLLIGALMDRLRPRRVV------LLIYAGILASLAALAAAPSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPT 339 (406)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHH------HHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcch
Confidence 99999999999999999874432 122222333333322 23334566677888999888889999999999999
Q ss_pred CchhhhhhHHHhhhhHHHHHHHHHHHHHHHHhhhhcccCcccccccccccccCCCCCCCCCccccCcccHHHHHHHHHHH
Q 007654 484 KKFGALYNFLTLANPAGSLVFSGLIASYIYDHEAEKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTSMIMSGLC 563 (594)
Q Consensus 484 k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~ 563 (594)
++.|+..|+......+|.. ++|.++|.++|+.+ -+...|.+....+
T Consensus 340 ~~~g~~~g~~~~~~~~g~~-~g~~~~g~l~~~~~---------------------------------~~~~~~~~~~~~~ 385 (406)
T PRK11551 340 QVRGTGVGAAVAVGRLGSM-AGPLLAGQLLALGR---------------------------------STVGVIGASIPVI 385 (406)
T ss_pred hhhhhhhhHHHHhhhHHHH-HHhhhHhhhhccCC---------------------------------chHHHHHHHHHHH
Confidence 9999999999999889887 59999999998654 3677777777777
Q ss_pred HHHHHHHHHHHh
Q 007654 564 IVAVILSMILVH 575 (594)
Q Consensus 564 ~~a~~ls~~l~~ 575 (594)
+++.++++++.+
T Consensus 386 ~~~~~~~~~~~~ 397 (406)
T PRK11551 386 LVAALAALLLVS 397 (406)
T ss_pred HHHHHHHHHHhc
Confidence 777776665543
No 13
>PRK03699 putative transporter; Provisional
Probab=99.84 E-value=1.2e-18 Score=187.30 Aligned_cols=377 Identities=16% Similarity=0.159 Sum_probs=241.1
Q ss_pred cchhHHHHHHHHHHHHhcC-cccccccccHHHHhhhCCChhhHHHHHHHHhhhhhc-ccchhhhhchhhhHHHHHHHHHH
Q 007654 12 FNNRWLVFVAAMWIQSCAG-IGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQ 89 (594)
Q Consensus 12 ~~~Rw~~l~a~~~i~l~~G-t~Y~fS~ys~~Lk~~lg~sq~~l~~i~~a~~~G~~~-gi~~G~l~D~~gp~~~l~iG~~~ 89 (594)
+.|||.....+.+.....| ..+.++..-|++++++|+|.+|+..+.....++..+ .++.|.+.||+|+|.++.++.++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~ 81 (394)
T PRK03699 2 NSNRIKLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFAL 81 (394)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 4577766655555555554 468899999999999999999999987667777655 67899999999999998888887
Q ss_pred HHHHHHHHHHHHhcCCCChhHHHHHHHHHhhccccchhhhhHHHHHHHhcCC-CCCceehhhHhhhhhhHHHHHHHHHHh
Q 007654 90 NFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPK-SRGPVVGILKGFAGLGGAILTQVYTMI 168 (594)
Q Consensus 90 ~~~Gy~~~~l~~~g~i~~~s~~~l~~~~~l~g~G~~~~~taal~t~~k~FP~-~RG~~~Gl~~a~~GLSa~i~s~i~~~~ 168 (594)
..++..+... . ++++.+.+.-++.|.+.+..++.+.....++||+ +||.+.++.-..+++++.+...+...+
T Consensus 82 ~~i~~~l~~~--~-----~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 154 (394)
T PRK03699 82 MILAVAGLMF--S-----HSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYL 154 (394)
T ss_pred HHHHHHHHHH--c-----chHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777665432 1 2466666555666667777777777778899985 589999888888888876665443211
Q ss_pred cCCChHHHHHHHHHHHHHHHHhhheeecccCCCCcCCCCCCCchhHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHH
Q 007654 169 HAPDHANLIFMVAVGPAMVVIALMFIIRPVGGHRQVRPSDSSSFTFIYSVCLLLAAYLMGVMLVEDLVDLNHTVIIIFTV 248 (594)
Q Consensus 169 f~~~~~~fll~la~~~~~v~l~~~~~ir~~~~~~~~~~~~~~~f~~~~~~~~~l~~~l~~~~~~~~~~~~s~~~~~~~~~ 248 (594)
.... .+ ... .|.... ...+
T Consensus 155 ~~~~-------------------------~g------------w~~---------~f~~~~---------------~~~~ 173 (394)
T PRK03699 155 LARS-------------------------IE------------WYW---------VYACIG---------------LVYV 173 (394)
T ss_pred Hhcc-------------------------cc------------HHH---------HHHHHH---------------HHHH
Confidence 1000 00 000 000000 0000
Q ss_pred HHHHHhhhcchhhhhhcccccCCChhhhhhcCCCCCCCCCCCCCcchhhhhcccccCCCCccCCCchhHHHHHHHHHHHH
Q 007654 249 ILFVLLFIPIVIPIILSFFLERTDPAEEALLSKPENMEPGKSNQETDEVILSEVEDEKPKDVDLLPASERRKRIAQLQAR 328 (594)
Q Consensus 249 i~~~ll~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (594)
+.++ +.. ..+.++ ++++++ ++++
T Consensus 174 ~~~~-~~~----------~~~~p~---------~~~~~~---------------~~~~---------------------- 196 (394)
T PRK03699 174 AIFI-LTL----------FSEFPA---------LGKHAP---------------KADK---------------------- 196 (394)
T ss_pred HHHH-HHH----------hcCCcc---------ccccCc---------------cccC----------------------
Confidence 0000 000 000000 000000 0000
Q ss_pred HHhhhhhhhhhhhccCCCCCCCCCCHHHHhhcHHHHHHHHHHHhhhcchhheecchHHHHHH-hCCCcch--hHHHHHHH
Q 007654 329 LFHAAAEGAVRVKRRRGPHRGEDFTLTQALIKADFWLIFFSLLLGSGSGLTVIDNLGQMSQS-LGYDNTH--IFVSMISI 405 (594)
Q Consensus 329 ~~~~~~~~~~~~~~~~~p~~~~d~t~~e~l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~~-~g~~~~~--~~Vsl~si 405 (594)
+ . .+ . ..++.+|++.+..++....-..+.+-+..+.++ .|.+..+ ..++++.+
T Consensus 197 ------------~-~--~~--~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~ 252 (394)
T PRK03699 197 ------------P-V--AK--E-------KWGIGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWM 252 (394)
T ss_pred ------------c-c--cc--c-------cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHH
Confidence 0 0 00 0 124678888877776554444444556667754 5887653 47889999
Q ss_pred hhhhhcccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHh-ccCchhHHHHHHHHHhhhhhccchhHHHHHHhhccC
Q 007654 406 WNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLG-MGWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLK 484 (594)
Q Consensus 406 ~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~-~~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k 484 (594)
++.+||+.+|+++||++||+.. ....++..+..+++. ..+...+.+...+.|++.++.+.+..+...|.. .+
T Consensus 253 ~~~ig~~~~g~l~dr~~~~~~l------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~-~~ 325 (394)
T PRK03699 253 AYMVGMWIFSFIVRFFDLQRIL------TVLAGLALVLMYLFVNTDDPSHLLYAILGLGFFSSAIYTTIITLGSQQT-KV 325 (394)
T ss_pred HHHHHHHHHHHHHHHhchhhHH------HHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cC
Confidence 9999999999999999875432 222222333333332 233334556677889999988888888878765 56
Q ss_pred chhhhhhHHHhhhhHHHHHHHHHHHHHHHHhhhhcccCcccccccccccccCCCCCCCCCccccCcccHHHHHHHHHHHH
Q 007654 485 KFGALYNFLTLANPAGSLVFSGLIASYIYDHEAEKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTSMIMSGLCI 564 (594)
Q Consensus 485 ~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~ 564 (594)
+.++.+|.+.....+|+. ++|.+.|.++|..+ ++.+|.+..++++
T Consensus 326 ~~~~~~g~~~~~~~~g~~-i~p~~~G~l~~~~g----------------------------------~~~~~~~~~~~~~ 370 (394)
T PRK03699 326 ASPKLVNFILTCGTIGTM-LTFVVTSPIVAHFG----------------------------------LQAALLTANGLYA 370 (394)
T ss_pred CCHHHHHHHHHhhhHHHH-HHHHHHHHHHHHhC----------------------------------chhhhhhhHHHHH
Confidence 778889999888888887 59999999999765 7788999988888
Q ss_pred HHHHHHHHHHhhhhh
Q 007654 565 VAVILSMILVHRTTN 579 (594)
Q Consensus 565 ~a~~ls~~l~~r~r~ 579 (594)
++.++++.+.+-.||
T Consensus 371 ~~~~~~~~~~~~~~~ 385 (394)
T PRK03699 371 VVFVMCILLGFVSKH 385 (394)
T ss_pred HHHHHHHHHHHHHHH
Confidence 888777766555444
No 14
>PRK03545 putative arabinose transporter; Provisional
Probab=99.82 E-value=5.6e-18 Score=181.52 Aligned_cols=368 Identities=10% Similarity=0.045 Sum_probs=231.0
Q ss_pred chhHHHHHHHHHHHHhc-CcccccccccHHHHhhhCCChhhHHHHHHHHhhhh-hcccchhhhhchhhhHHHHHHHHHHH
Q 007654 13 NNRWLVFVAAMWIQSCA-GIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGD-SVGFLAGSLCEVLPIWGALLVGALQN 90 (594)
Q Consensus 13 ~~Rw~~l~a~~~i~l~~-Gt~Y~fS~ys~~Lk~~lg~sq~~l~~i~~a~~~G~-~~gi~~G~l~D~~gp~~~l~iG~~~~ 90 (594)
++||..+..-.+.+... -..|.-+..-|++++++|+|++|+.++.....++. ...++.|.+.||+|+|.++.++.+..
T Consensus 5 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 84 (390)
T PRK03545 5 KVAWLRVVTLALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLF 84 (390)
T ss_pred ccchHHHHHHHHHHHHHHhHHHHHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 44565444333333332 33354555678999999999999999766666555 44788999999999999999998887
Q ss_pred HHHHHHHHHHHhcCCCChhHHHHHHHHHhhccccchhhhhHHHHHHHhcC-CCCCceehhhHhhhhhhHHHHHHHHHHhc
Q 007654 91 FIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIH 169 (594)
Q Consensus 91 ~~Gy~~~~l~~~g~i~~~s~~~l~~~~~l~g~G~~~~~taal~t~~k~FP-~~RG~~~Gl~~a~~GLSa~i~s~i~~~~f 169 (594)
.++..+...+ +++|.+.+.-++.|.+.+..++.......+++| ++||++.|+.....+++..+-..+...+
T Consensus 85 ~~~~~~~~~~-------~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l- 156 (390)
T PRK03545 85 IASHVLSALA-------WNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVI- 156 (390)
T ss_pred HHHHHHHHHh-------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHH-
Confidence 7776654322 246776655566666777777777777788987 5799999999888888776554333211
Q ss_pred CCChHHHHHHHHHHHHHHHHhhheeecccCCCCcCCCCCCCchhHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHH
Q 007654 170 APDHANLIFMVAVGPAMVVIALMFIIRPVGGHRQVRPSDSSSFTFIYSVCLLLAAYLMGVMLVEDLVDLNHTVIIIFTVI 249 (594)
Q Consensus 170 ~~~~~~fll~la~~~~~v~l~~~~~ir~~~~~~~~~~~~~~~f~~~~~~~~~l~~~l~~~~~~~~~~~~s~~~~~~~~~i 249 (594)
.. ..+....+. ..++.
T Consensus 157 ---------------------~~------------------------------------------~~gw~~~f~-~~~~~ 172 (390)
T PRK03545 157 ---------------------GQ------------------------------------------YLGWRTTFL-AIGGG 172 (390)
T ss_pred ---------------------HH------------------------------------------HhcHHHHHH-HHHHH
Confidence 00 000000000 00000
Q ss_pred HHHHhhhcchhhhhhcccccCCChhhhhhcCCCCCCCCCCCCCcchhhhhcccccCCCCccCCCchhHHHHHHHHHHHHH
Q 007654 250 LFVLLFIPIVIPIILSFFLERTDPAEEALLSKPENMEPGKSNQETDEVILSEVEDEKPKDVDLLPASERRKRIAQLQARL 329 (594)
Q Consensus 250 ~~~ll~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (594)
.++.... . ... .+++++ +++ .
T Consensus 173 ~~l~~~~-----~-~~~------------~~~~~~-------------------~~~------------~---------- 193 (390)
T PRK03545 173 ALITLLL-----L-IKL------------LPLLPS-------------------EHS------------G---------- 193 (390)
T ss_pred HHHHHHH-----H-HHh------------CCCCCC-------------------CCc------------c----------
Confidence 0000000 0 000 000000 000 0
Q ss_pred HhhhhhhhhhhhccCCCCCCCCCCHHHHhhcHHHHHHHHHHHhhhcchhheecchHHHHHH-hCCCcch--hHHHHHHHh
Q 007654 330 FHAAAEGAVRVKRRRGPHRGEDFTLTQALIKADFWLIFFSLLLGSGSGLTVIDNLGQMSQS-LGYDNTH--IFVSMISIW 406 (594)
Q Consensus 330 ~~~~~~~~~~~~~~~~p~~~~d~t~~e~l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~~-~g~~~~~--~~Vsl~si~ 406 (594)
...+.++.+|++++|.++...++......+..+...++.++ .|.+... ...+++++.
T Consensus 194 --------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~ 253 (390)
T PRK03545 194 --------------------SLKSLPLLFRRPALVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGA 253 (390)
T ss_pred --------------------hHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHH
Confidence 00023568899999887766665544444444556666666 4766543 367889999
Q ss_pred hhhhcccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHH--hccCchhHHHHHHHHHhhhhhccchhHHHHHHhhccC
Q 007654 407 NFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFL--GMGWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLK 484 (594)
Q Consensus 407 n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~--~~~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k 484 (594)
+.+|++..|.++||.+|+. . .....+..++.+++ ...+...+.+..++.|++++.........+.|... +
T Consensus 254 ~~~g~~~~g~l~dr~~~~~-----~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~ 325 (390)
T PRK03545 254 GIIGSVLFSRLGNRHPSGF-----L--LIAIALLLVCLLLLLPAANSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAP-D 325 (390)
T ss_pred HHHHHHHHHHHhhccchhH-----H--HHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhcchHHHHHHHHHhCC-C
Confidence 9999999999999886521 1 12222222232222 22333456667888899888776777778888765 6
Q ss_pred chhhhhhHHHhhhhHHHHHHHHHHHHHHHHhhhhcccCcccccccccccccCCCCCCCCCccccCcccHHHHHHHHHHHH
Q 007654 485 KFGALYNFLTLANPAGSLVFSGLIASYIYDHEAEKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTSMIMSGLCI 564 (594)
Q Consensus 485 ~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~ 564 (594)
+.|+..|+.....-+|.. ++|.+.|.++|+.+ ++..|.+.+.+.+
T Consensus 326 ~~~~~~g~~~~~~~~g~~-~G~~~~G~~~~~~g----------------------------------~~~~~~~~~~~~~ 370 (390)
T PRK03545 326 ATDVAMALFSGIFNIGIG-AGALLGNQVSLHLG----------------------------------LSSIGYVGAALAL 370 (390)
T ss_pred cHHHHHHHHHHHHHHHHH-HHHHHHHHHHhccC----------------------------------hhHHHHHHHHHHH
Confidence 778888877766666766 59999999999875 8899999998888
Q ss_pred HHHHHHHHHH
Q 007654 565 VAVILSMILV 574 (594)
Q Consensus 565 ~a~~ls~~l~ 574 (594)
++++.+....
T Consensus 371 ~~~~~~~~~~ 380 (390)
T PRK03545 371 AALVWSILIF 380 (390)
T ss_pred HHHHHHHHHc
Confidence 8887766544
No 15
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.82 E-value=3.8e-18 Score=186.24 Aligned_cols=411 Identities=17% Similarity=0.163 Sum_probs=234.9
Q ss_pred hhhhcchhHHHHHHHHHHHHhcCc-ccccccccHHHHhhhCCChhhHHHHHHHHhhhhh-cccchhhhhchhhhHHHHHH
Q 007654 8 FVSFFNNRWLVFVAAMWIQSCAGI-GYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDS-VGFLAGSLCEVLPIWGALLV 85 (594)
Q Consensus 8 ~~~~~~~Rw~~l~a~~~i~l~~Gt-~Y~fS~ys~~Lk~~lg~sq~~l~~i~~a~~~G~~-~gi~~G~l~D~~gp~~~l~i 85 (594)
.|...+.||..+.+..+...+... ...++...|.+++ +|+|++|...+.....++.. ..++.|.+.||+|+|..+.+
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~ 96 (438)
T TIGR00712 18 DPTYKRLRWQVFLGIFFGYAAYYLVRKNFALAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPA 96 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccHHhhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHH
Confidence 334444577776666555544443 3456666788886 59999999998666666664 47899999999999999888
Q ss_pred HHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHhhccccchhhhhHHHHHHHhcC-CCCCceehhhHhhhhhhHHHHHHH
Q 007654 86 GALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQV 164 (594)
Q Consensus 86 G~~~~~~Gy~~~~l~~~g~i~~~s~~~l~~~~~l~g~G~~~~~taal~t~~k~FP-~~RG~~~Gl~~a~~GLSa~i~s~i 164 (594)
+.++..++..++... ... ..+++.+++..++.|.+.+..+........++|| ++||++.|+.-...++++.+...+
T Consensus 97 ~~~~~~~~~~~~~~~--~~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l 173 (438)
T TIGR00712 97 GLILSAAVMLLMGFV--PWA-TSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLL 173 (438)
T ss_pred HHHHHHHHHHHHhcc--ccc-cchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHH
Confidence 888877776654322 111 1245666655556666666666677777889997 579999999888888887666544
Q ss_pred HHHhcCCChHHHHHHHHHHHHHHHHhhheeecccCCCCcCCCCCCCchhHHHHHHHHHHHHHHHHHHhhhccccchhHHH
Q 007654 165 YTMIHAPDHANLIFMVAVGPAMVVIALMFIIRPVGGHRQVRPSDSSSFTFIYSVCLLLAAYLMGVMLVEDLVDLNHTVII 244 (594)
Q Consensus 165 ~~~~f~~~~~~fll~la~~~~~v~l~~~~~ir~~~~~~~~~~~~~~~f~~~~~~~~~l~~~l~~~~~~~~~~~~s~~~~~ 244 (594)
........ .+ ....+ ++.+
T Consensus 174 ~~~~~~~~-------------------------~~------------w~~~f--------~~~~---------------- 192 (438)
T TIGR00712 174 VLLGMAWF-------------------------ND------------WHAAL--------YFPA---------------- 192 (438)
T ss_pred HHHHHHHh-------------------------hh------------hHHHH--------HHHH----------------
Confidence 32110000 00 00000 0000
Q ss_pred HHHHHHHHHhhhcchhhhhhcccccCCChhhhhhcCCCCCCCCCCCCCcchhhhhcccccCCCCccCCCchhHHHHHHHH
Q 007654 245 IFTVILFVLLFIPIVIPIILSFFLERTDPAEEALLSKPENMEPGKSNQETDEVILSEVEDEKPKDVDLLPASERRKRIAQ 324 (594)
Q Consensus 245 ~~~~i~~~ll~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (594)
...++..++... +.++ ++++.. .++.++ . +++.+++.. .++
T Consensus 193 ~~~~i~~~~~~~---------~~~~--~~~~~~-~~~~~~-~----------------~~~~~~~~~--~~~-------- 233 (438)
T TIGR00712 193 ICAIIVALFAFA---------MMRD--TPQSCG-LPPIEE-Y----------------RNDYPDDYN--EKA-------- 233 (438)
T ss_pred HHHHHHHHHHHH---------hccC--CHHhcC-CCCchh-c----------------ccccccccc--ccc--------
Confidence 000000000000 1111 110000 000000 0 000000000 000
Q ss_pred HHHHHHhhhhhhhhhhhccCCCCCCCCCCHHHHhhcHHHHHHHHHHHhhhcchhheecchHHHHHH-hCCCcch--hHHH
Q 007654 325 LQARLFHAAAEGAVRVKRRRGPHRGEDFTLTQALIKADFWLIFFSLLLGSGSGLTVIDNLGQMSQS-LGYDNTH--IFVS 401 (594)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~p~~~~d~t~~e~l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~~-~g~~~~~--~~Vs 401 (594)
+++ .+ .++...++.+|++.+|.+.+..++....-..+.....++.++ .|.++.. ...+
T Consensus 234 ----------------~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~ 294 (438)
T TIGR00712 234 ----------------EQE--LT-AKEIFMQYVLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYF 294 (438)
T ss_pred ----------------ccc--cc-hHHHHHHHHccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHH
Confidence 000 00 001112347899999999877666554444555667777776 4777643 3677
Q ss_pred HHHHhhhhhcccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHhc---cCchhHHHHHHHHHhhhhhccchhHHHHH
Q 007654 402 MISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLGM---GWPGAMYVGTLLIGLGYGAHWAIVPAAAS 478 (594)
Q Consensus 402 l~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~~---~~~~~l~~~~~liG~~~G~~~~l~p~i~s 478 (594)
++++.+.+|++.+|+++||++++++.. .......+..++.+++.. ......++..+++|+...+........+.
T Consensus 295 ~~~~~~~ig~~~~g~l~dr~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 371 (438)
T TIGR00712 295 LYEYAGIPGTLLCGWMSDKVFKGNRGA---TGVFFMTLVTIAVIVYWMNPAGNPLVDMICMIVIGFLIYGPVMLIGLHAL 371 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCcccH---HHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHccHHHHHHHHHH
Confidence 899999999999999999997644332 111111112222222211 12222333334444432222222234678
Q ss_pred HhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHHhhhhcccCcccccccccccccCCCCCCCCCccccCcccHHHHHH
Q 007654 479 ELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYDHEAEKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTSMI 558 (594)
Q Consensus 479 ~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f~i 558 (594)
|.++.++.|+..|+......+|+..++|.+.|.+.|..+ |..+|.+
T Consensus 372 ~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g----------------------------------~~~~~~~ 417 (438)
T TIGR00712 372 ELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFG----------------------------------WDGGFMV 417 (438)
T ss_pred HhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhcc----------------------------------chHHHHH
Confidence 999999999999999766556654468999999999654 8899999
Q ss_pred HHHHHHHHHHHHHHHHhhhh
Q 007654 559 MSGLCIVAVILSMILVHRTT 578 (594)
Q Consensus 559 ~~~~~~~a~~ls~~l~~r~r 578 (594)
..+.+++++++.+++...+|
T Consensus 418 ~~~~~~~~~~~~~~~~~~~~ 437 (438)
T TIGR00712 418 MIGGSILAVILLIVVMIGEK 437 (438)
T ss_pred HHHHHHHHHHHHHHHHhhcc
Confidence 99999898888887665444
No 16
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.81 E-value=6.3e-18 Score=182.61 Aligned_cols=366 Identities=16% Similarity=0.168 Sum_probs=223.9
Q ss_pred hhhhcchhHHHHHHHHHHHHhcCcc-cccccccHHHHhhhCCChhhHHHHHHHHhhhhhc-ccchhhhhchhhhHHHHHH
Q 007654 8 FVSFFNNRWLVFVAAMWIQSCAGIG-YLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLV 85 (594)
Q Consensus 8 ~~~~~~~Rw~~l~a~~~i~l~~Gt~-Y~fS~ys~~Lk~~lg~sq~~l~~i~~a~~~G~~~-gi~~G~l~D~~gp~~~l~i 85 (594)
-++..+.+|..+....+..+..+.. +..+...+.+++++|+|..|..++.....++..+ +++.|.+.||+|+|.++.+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~ 88 (426)
T PRK12307 9 YSEITRPQKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMW 88 (426)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHH
Confidence 3344445555555555666665544 3445566788899999999999987777777755 7889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHhhccccchhhhhHHHHHHHhcC-CCCCceehhhHhhhhhhHHHHHHH
Q 007654 86 GALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQV 164 (594)
Q Consensus 86 G~~~~~~Gy~~~~l~~~g~i~~~s~~~l~~~~~l~g~G~~~~~taal~t~~k~FP-~~RG~~~Gl~~a~~GLSa~i~s~i 164 (594)
+.++..++..+...+ .++|.+.+.-++.|.|.+..+++......++|| ++||++.|+...+.++|..+...+
T Consensus 89 ~~~~~~~~~~~~~~~-------~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l 161 (426)
T PRK12307 89 SIVAYSVGTGLSGLA-------SGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYF 161 (426)
T ss_pred HHHHHHHHHHHHHHH-------hHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHH
Confidence 999988887764332 246777777777788888888888888899998 459999999999999988766544
Q ss_pred HHHhcCCChHHHHHHHHHHHHHHHHhhheeecccCCCCcCCCCCCCchhHHHHHHHHHHHHHHHHHHhhhccccchhHHH
Q 007654 165 YTMIHAPDHANLIFMVAVGPAMVVIALMFIIRPVGGHRQVRPSDSSSFTFIYSVCLLLAAYLMGVMLVEDLVDLNHTVII 244 (594)
Q Consensus 165 ~~~~f~~~~~~fll~la~~~~~v~l~~~~~ir~~~~~~~~~~~~~~~f~~~~~~~~~l~~~l~~~~~~~~~~~~s~~~~~ 244 (594)
...+.+. .+ .... ++...
T Consensus 162 ~~~l~~~--------------------------~~------------w~~~---------f~i~~--------------- 179 (426)
T PRK12307 162 MPSFAEA--------------------------YG------------WRAA---------FFVGL--------------- 179 (426)
T ss_pred HHHHccc--------------------------CC------------HHHH---------HHHHH---------------
Confidence 3211100 00 0000 00000
Q ss_pred HHHHHHHHHhhhcchhhhhhcccccCCChhhhhhcCCCCCCCCCCCCCcchhhhhcccccCCCCccCCCchhHHHHHHHH
Q 007654 245 IFTVILFVLLFIPIVIPIILSFFLERTDPAEEALLSKPENMEPGKSNQETDEVILSEVEDEKPKDVDLLPASERRKRIAQ 324 (594)
Q Consensus 245 ~~~~i~~~ll~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (594)
.. . ++ .+.. ....+++.+.. +++ . ++++ ++.
T Consensus 180 ~~-~-~~-~~~~----------~~~~p~~~~~~--~~~---~----------------~~~~-~~~-------------- 210 (426)
T PRK12307 180 LP-V-LL-VIYI----------RARAPESKEWE--EAK---L----------------SGKG-KHS-------------- 210 (426)
T ss_pred HH-H-HH-HHHH----------HHHCCCChHHH--Hhh---h----------------hccc-ccc--------------
Confidence 00 0 00 0000 00000000000 000 0 0000 000
Q ss_pred HHHHHHhhhhhhhhhhhccCCCCCCCCCCHHHHhhcHHHHHHHHHHHh---hhcchhheecchHHHHHHhCCCcch--hH
Q 007654 325 LQARLFHAAAEGAVRVKRRRGPHRGEDFTLTQALIKADFWLIFFSLLL---GSGSGLTVIDNLGQMSQSLGYDNTH--IF 399 (594)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~p~~~~d~t~~e~l~t~~Fwll~~~~~~---~~g~Gl~vi~n~~~i~~~~g~~~~~--~~ 399 (594)
+ + ..+....++++++|++++|.+...+.+ ..+....+.+...+..++.|.+... ..
T Consensus 211 ----------------~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 271 (426)
T PRK12307 211 ----------------Q-S--AWSVFSLSMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAGEGFDTGVVSNL 271 (426)
T ss_pred ----------------c-c--chhhhhHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 0 0 000011246788899999875543332 2222223445666677777877543 36
Q ss_pred HHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHh-ccCchhHHHHHHHHHhhh--hhccchhHHH
Q 007654 400 VSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLG-MGWPGAMYVGTLLIGLGY--GAHWAIVPAA 476 (594)
Q Consensus 400 Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~-~~~~~~l~~~~~liG~~~--G~~~~l~p~i 476 (594)
.++..+++.+|++.+|+++||++||+.. .....+..+..+.+. ........+...+.|+.+ .+..++.|.+
T Consensus 272 ~~~~~~~~~~g~~~~g~l~dr~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (426)
T PRK12307 272 MTAAAFGTVLGNIVWGLCADRIGLKKTF------SIGLLMSFLFIFPLFRIPQDNYLLLGACLFGLMATNVGVGGLVPKF 345 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccHHHH------HHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhcccHhHHHHHH
Confidence 6888999999999999999999875421 222222222222222 222222333444444433 3456789999
Q ss_pred HHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHHhhh
Q 007654 477 ASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYDHEA 517 (594)
Q Consensus 477 ~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~~ 517 (594)
+.|.|+.++.|+..|+.+....+|+. ++|.+.|.+.|+.+
T Consensus 346 ~~~~~p~~~~g~~~g~~~~~~~~~~~-~gp~~~g~l~~~~g 385 (426)
T PRK12307 346 LYDYFPLEVRGLGTGLIYNLAATSGT-FNSMAATWLGITMG 385 (426)
T ss_pred HHHhCcHHHHhhhhhHHHHHHhHHHH-HHHHHHHHHHHccc
Confidence 99999999999999999888888887 59999999998775
No 17
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.81 E-value=6.7e-18 Score=176.95 Aligned_cols=357 Identities=15% Similarity=0.189 Sum_probs=220.1
Q ss_pred cccccccccHHHHhhhCCChhhHHHHHHHHhhhhhc-ccchhhhhchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCChh
Q 007654 31 IGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLP 109 (594)
Q Consensus 31 t~Y~fS~ys~~Lk~~lg~sq~~l~~i~~a~~~G~~~-gi~~G~l~D~~gp~~~l~iG~~~~~~Gy~~~~l~~~g~i~~~s 109 (594)
....|+...|.+++++|+|.+|...+.....++..+ .++.|.+.||+|+|.++.+|.++..++..+...+ .+
T Consensus 10 ~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-------~~ 82 (379)
T TIGR00881 10 VRKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFS-------TS 82 (379)
T ss_pred hHHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHh-------hh
Confidence 345778888999999999999999987777777754 7899999999999999999998887887765433 14
Q ss_pred HHHHHHHHHhhccccchhhhhHHHHHHHhcCC-CCCceehhhHhhhhhhHHHHHHHHHHhcCCChHHHHHHHHHHHHHHH
Q 007654 110 LWAMCILIFVGNNGETYFNTAALVSCVQNFPK-SRGPVVGILKGFAGLGGAILTQVYTMIHAPDHANLIFMVAVGPAMVV 188 (594)
Q Consensus 110 ~~~l~~~~~l~g~G~~~~~taal~t~~k~FP~-~RG~~~Gl~~a~~GLSa~i~s~i~~~~f~~~~~~fll~la~~~~~v~ 188 (594)
+|.+.+..++.|.+.+..+........+++|+ +||.+.|+......+++.+-..+.......
T Consensus 83 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~----------------- 145 (379)
T TIGR00881 83 LWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAE----------------- 145 (379)
T ss_pred HHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHh-----------------
Confidence 67777677777788888888888888999985 699999999988888876665322111100
Q ss_pred HhhheeecccCCCCcCCCCCCCchhHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHhhhcchhhhhhcccc
Q 007654 189 IALMFIIRPVGGHRQVRPSDSSSFTFIYSVCLLLAAYLMGVMLVEDLVDLNHTVIIIFTVILFVLLFIPIVIPIILSFFL 268 (594)
Q Consensus 189 l~~~~~ir~~~~~~~~~~~~~~~f~~~~~~~~~l~~~l~~~~~~~~~~~~s~~~~~~~~~i~~~ll~~~~~~~~~~~~~~ 268 (594)
..+. + ..+.+ .. .+..+..++... +.+
T Consensus 146 --------~~~~---------~---~~~~~---------~~---------------~~~~~~~~~~~~---------~~~ 172 (379)
T TIGR00881 146 --------LYSW---------H---WVFIV---------PG---------------IIAIIVSLICFL---------LLR 172 (379)
T ss_pred --------cCCc---------h---hHHHH---------HH---------------HHHHHHHHHHhe---------eeC
Confidence 0000 0 00000 00 000000000000 111
Q ss_pred cCCChhhhhhcCCCCCCCCCCCCCcchhhhhcccccCCCCccCCCchhHHHHHHHHHHHHHHhhhhhhhhhhhccCCCCC
Q 007654 269 ERTDPAEEALLSKPENMEPGKSNQETDEVILSEVEDEKPKDVDLLPASERRKRIAQLQARLFHAAAEGAVRVKRRRGPHR 348 (594)
Q Consensus 269 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 348 (594)
++++. +. .+ +.++. . +++..++.+ + .++ ...
T Consensus 173 ~~~~~--~~---~~-~~~~~-----~--------~~~~~~~~~----~-----------------------~~~---~~~ 203 (379)
T TIGR00881 173 DSPQS--CG---LP-PAEEM-----P--------NEEPDGDAE----K-----------------------KEE---ELT 203 (379)
T ss_pred CCccc--cc---cC-ccccC-----c--------ccccccccc----c-----------------------ccc---ccc
Confidence 11100 00 00 00000 0 000000000 0 000 000
Q ss_pred CCCCCHHHHhhcHHHHHHHHHHHhhhcchhheecchHHHHH-HhCCCcch--hHHHHHHHhhhhhcccccchhhhhhhcc
Q 007654 349 GEDFTLTQALIKADFWLIFFSLLLGSGSGLTVIDNLGQMSQ-SLGYDNTH--IFVSMISIWNFLGRVGGGYFSEIIVRDY 425 (594)
Q Consensus 349 ~~d~t~~e~l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~-~~g~~~~~--~~Vsl~si~n~~GRl~~G~lsD~l~r~~ 425 (594)
..+...++.+|++.+|.+.+..++.......+.....+..+ ..|.+... ...++.++.+.+|++++|+++||..+++
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~ 283 (379)
T TIGR00881 204 KKQIFLQYVLLNKVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGR 283 (379)
T ss_pred chHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCc
Confidence 11234567899999999988877765554444444555554 45777543 3678899999999999999999875544
Q ss_pred CCchhHHHHHHHHHHHHHHHHHhc---cCchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHH
Q 007654 426 AYPRPVAMAVAQFVMAIGHIFLGM---GWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSL 502 (594)
Q Consensus 426 ~~~r~~~l~~~~~~~~~~~ll~~~---~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~ 502 (594)
+.. ..........++.+.+.. .....+.+...+.|+..++.......++.|.+..++.|+.+|+......+|..
T Consensus 284 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ 360 (379)
T TIGR00881 284 RGP---LAVFFMALIIVSLLVYWLNPAANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGI 360 (379)
T ss_pred chH---HHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhh
Confidence 322 111111222222222221 12223445556667766666677778899999999999999999988888887
Q ss_pred HHHHHHHHHHHHhhh
Q 007654 503 VFSGLIASYIYDHEA 517 (594)
Q Consensus 503 ~~~~~l~G~iyd~~~ 517 (594)
++|.+.|.+.|+.|
T Consensus 361 -~~~~~~g~l~~~~g 374 (379)
T TIGR00881 361 -LAGLPLGYLADGFG 374 (379)
T ss_pred -hhhhhHHHHHHhhc
Confidence 59999999999876
No 18
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.80 E-value=2.7e-18 Score=186.21 Aligned_cols=385 Identities=12% Similarity=0.083 Sum_probs=217.5
Q ss_pred hhHHHHHHHHHHHHh-cCcccccccccHHHHhhhCCChhhHHHHHHHHhhhhhc-ccchhhhhchhhhHHHHHHHHHHHH
Q 007654 14 NRWLVFVAAMWIQSC-AGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNF 91 (594)
Q Consensus 14 ~Rw~~l~a~~~i~l~-~Gt~Y~fS~ys~~Lk~~lg~sq~~l~~i~~a~~~G~~~-gi~~G~l~D~~gp~~~l~iG~~~~~ 91 (594)
.||..+....+.-.+ .=..+..+.-.++|++++|+|.+|++++..+..++..+ .++.|.+.||+|+|.++.++.++..
T Consensus 5 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~ 84 (412)
T TIGR02332 5 LFRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWG 84 (412)
T ss_pred ehhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHH
Confidence 355544444443333 22345667778999999999999999987777777644 7899999999999999999998888
Q ss_pred HHHHHHHHHHhcCCCChhHHHHHHHHHhhccccchhhhhHHHHHHHhcCC-CCCceehhhHhhhhhhHHHHHHHHHHhcC
Q 007654 92 IGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPK-SRGPVVGILKGFAGLGGAILTQVYTMIHA 170 (594)
Q Consensus 92 ~Gy~~~~l~~~g~i~~~s~~~l~~~~~l~g~G~~~~~taal~t~~k~FP~-~RG~~~Gl~~a~~GLSa~i~s~i~~~~f~ 170 (594)
++..+..++ .+++.+++.-++.|.+.+..+++......+|||. +||++.|+...+.++|..+-..+...+.
T Consensus 85 ~~~~~~~~~-------~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~- 156 (412)
T TIGR02332 85 IASTATMFA-------TGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYIL- 156 (412)
T ss_pred HHHHHHHHh-------cCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 877765322 1356666666677778887777777778999985 6999999999998888766544332110
Q ss_pred CChHHHHHHHHHHHHHHHHhhheeecccCCCCcCCCCCCCchhHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHH
Q 007654 171 PDHANLIFMVAVGPAMVVIALMFIIRPVGGHRQVRPSDSSSFTFIYSVCLLLAAYLMGVMLVEDLVDLNHTVIIIFTVIL 250 (594)
Q Consensus 171 ~~~~~fll~la~~~~~v~l~~~~~ir~~~~~~~~~~~~~~~f~~~~~~~~~l~~~l~~~~~~~~~~~~s~~~~~~~~~i~ 250 (594)
+. +. ..+.......+ +... ....+.
T Consensus 157 -------------------------~~-~~-----~~~~~gwr~~f---------~~~~---------------~~~l~~ 181 (412)
T TIGR02332 157 -------------------------AL-DG-----LMALKGWQWLF---------LLEG---------------FPSVIL 181 (412)
T ss_pred -------------------------hC-CC-----CCCccchhHHH---------HHHH---------------HHHHHH
Confidence 00 00 00000000100 0000 000000
Q ss_pred HHHhhhcchhhhhhcccccCCChhhhhhcCCCCCCCCCCCCCcchhhhhcccccCCCCccCCCchhHHHHHHHHHHHHHH
Q 007654 251 FVLLFIPIVIPIILSFFLERTDPAEEALLSKPENMEPGKSNQETDEVILSEVEDEKPKDVDLLPASERRKRIAQLQARLF 330 (594)
Q Consensus 251 ~~ll~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (594)
+++... +.+++++. ...++ +++++ ... +..+.+..+.+
T Consensus 182 ~~~~~~---------~~~~~p~~--~~~l~----------~~~~~-~~~-~~~~~~~~~~~------------------- 219 (412)
T TIGR02332 182 GVMTWF---------WLDDSPDK--AKWLD----------EEDKK-ALK-EMIDNDQLTLE------------------- 219 (412)
T ss_pred HHHHhh---------ccCCCccc--CCCCC----------HHHHH-HHH-HHHHhcccccc-------------------
Confidence 000000 11111100 00000 00000 000 00000000000
Q ss_pred hhhhhhhhhhhccCCCCCCCCCCHHHHhhcHHHHHHHHHHHhhhcchhheecchHHHHHHh--CCCcc--hhHHHHHHHh
Q 007654 331 HAAAEGAVRVKRRRGPHRGEDFTLTQALIKADFWLIFFSLLLGSGSGLTVIDNLGQMSQSL--GYDNT--HIFVSMISIW 406 (594)
Q Consensus 331 ~~~~~~~~~~~~~~~p~~~~d~t~~e~l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~~~--g~~~~--~~~Vsl~si~ 406 (594)
++++.. +++ +. .....+++ ++++.+|+..+++++....-..+.+.+.++.++. |.+.. ....++..++
T Consensus 220 --~~~~~~--~~~--~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~ 291 (412)
T TIGR02332 220 --QPEGAF--AHA--AM-PQRSMLRE-IFTPAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFC 291 (412)
T ss_pred --cccccc--ccc--cc-cHHHHHHH-hcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHH
Confidence 000000 000 00 00011233 4578999999888887666556677888898875 44433 2367889999
Q ss_pred hhhhcccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHhc-cCchhHHHHHHHHHhhhhhccchhHHHHHHhhccCc
Q 007654 407 NFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLGM-GWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKK 485 (594)
Q Consensus 407 n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~~-~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~ 485 (594)
+.+||+.+|+++||++||+. . +....++..++.++... ..+...+.+..+.+++......+......|.|+.|+
T Consensus 292 ~~~g~l~~g~l~dr~~~r~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 366 (412)
T TIGR02332 292 TIFGMIWWSRHSDRLKERKH----H-TALPYLFAAAGWLLASATDHNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQA 366 (412)
T ss_pred HHHHHHHHHHHhcccCccHH----H-HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHH
Confidence 99999999999999976432 1 11122223333222222 222222222223233332233344455578899999
Q ss_pred hhhhhhHHHhhhhHHHHHHHHHHHHHHHHhhh
Q 007654 486 FGALYNFLTLANPAGSLVFSGLIASYIYDHEA 517 (594)
Q Consensus 486 ~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~~ 517 (594)
.|+.+|+......+|+. ++|.+.|.+.|..+
T Consensus 367 ~~~a~g~~~~~~~~g~~-~~p~~~g~i~~~~g 397 (412)
T TIGR02332 367 RAIAIAVINATGNIGSA-LSPFLIGILKDATG 397 (412)
T ss_pred HHHHHHHHHHhhhhhhh-hhhhhcccccccCC
Confidence 99999999998888887 59999999999875
No 19
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.80 E-value=3.1e-17 Score=175.88 Aligned_cols=374 Identities=16% Similarity=0.125 Sum_probs=222.4
Q ss_pred HHHHHHHHHHHHhcCcccccccccHHHHhhhCCChhhHHHHHHHHhhhhhc-ccchhhhhchhhhHHHHHHHHHHHHHHH
Q 007654 16 WLVFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGY 94 (594)
Q Consensus 16 w~~l~a~~~i~l~~Gt~Y~fS~ys~~Lk~~lg~sq~~l~~i~~a~~~G~~~-gi~~G~l~D~~gp~~~l~iG~~~~~~Gy 94 (594)
...++.+..+... |......+....+++++|+|.+++..+..+..++..+ .++.|.+.||+|+|.++.++.+...++.
T Consensus 17 ~~~l~~~~~~~~~-~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~ 95 (399)
T PRK05122 17 IVSIVMFTFISYL-TIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSG 95 (399)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHH
Confidence 3344444333333 2334455666778999999999999987777777654 8899999999999999999988776666
Q ss_pred HHHHHHH-hcCCCChhHHHHHHHHHhhccccchhhhhHHHHHHHhcC-CCCCceehhhHhhhhhhHHHHHHHHHHhcCCC
Q 007654 95 GWVWLIV-TGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIHAPD 172 (594)
Q Consensus 95 ~~~~l~~-~g~i~~~s~~~l~~~~~l~g~G~~~~~taal~t~~k~FP-~~RG~~~Gl~~a~~GLSa~i~s~i~~~~f~~~ 172 (594)
....+.. .+..+..+++.+.+.-++.|.|.+..+.+......+++| ++||++.|+.-....++..+-..+...+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l---- 171 (399)
T PRK05122 96 LLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLL---- 171 (399)
T ss_pred HHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHH----
Confidence 5544332 222222245556666677788888888877777778886 6799999987655555443322222100
Q ss_pred hHHHHHHHHHHHHHHHHhhheeecccCCCCcCCCCCCCchhHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHH
Q 007654 173 HANLIFMVAVGPAMVVIALMFIIRPVGGHRQVRPSDSSSFTFIYSVCLLLAAYLMGVMLVEDLVDLNHTVIIIFTVILFV 252 (594)
Q Consensus 173 ~~~fll~la~~~~~v~l~~~~~ir~~~~~~~~~~~~~~~f~~~~~~~~~l~~~l~~~~~~~~~~~~s~~~~~~~~~i~~~ 252 (594)
. ...+ +... ++... ...++.
T Consensus 172 ------------------~----~~~g------------~~~~---------~~~~~---------------~~~~~~-- 191 (399)
T PRK05122 172 ------------------Y----HWGG------------LAGL---------GLLIM---------------LLALLG-- 191 (399)
T ss_pred ------------------H----Hccc------------HHHH---------HHHHH---------------HHHHHH--
Confidence 0 0000 0000 00000 000000
Q ss_pred HhhhcchhhhhhcccccCCChhhhhhcCCCCCCCCCCCCCcchhhhhcccccCCCCccCCCchhHHHHHHHHHHHHHHhh
Q 007654 253 LLFIPIVIPIILSFFLERTDPAEEALLSKPENMEPGKSNQETDEVILSEVEDEKPKDVDLLPASERRKRIAQLQARLFHA 332 (594)
Q Consensus 253 ll~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (594)
+++. .+.++ ++++ + +++
T Consensus 192 ~~~~-----------~~~~~--------~~~~-~-----------------~~~-------------------------- 208 (399)
T PRK05122 192 LLLA-----------RPRPA--------VPPV-K-----------------GER-------------------------- 208 (399)
T ss_pred HHHH-----------hcCCC--------CCCC-C-----------------ccc--------------------------
Confidence 0000 00000 0000 0 000
Q ss_pred hhhhhhhhhccCCCCCCCCCCHHHHhhcHHHHHHHHHHHhhhcchhheecchHHHHHHhCCCcchhHHHHHHHhhhhhcc
Q 007654 333 AAEGAVRVKRRRGPHRGEDFTLTQALIKADFWLIFFSLLLGSGSGLTVIDNLGQMSQSLGYDNTHIFVSMISIWNFLGRV 412 (594)
Q Consensus 333 ~~~~~~~~~~~~~p~~~~d~t~~e~l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~~~g~~~~~~~Vsl~si~n~~GRl 412 (594)
.+.++.+| ++|.....+.+....--++........++.+.+......+++.++..+||+
T Consensus 209 -------------------~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (399)
T PRK05122 209 -------------------LPFRRVLG--RVWPYGMGLALASIGFGTIATFITLYYAARGWDGAALALTLFGVAFVGARL 267 (399)
T ss_pred -------------------hhHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHH
Confidence 00111222 123222211111100011122333444556664445567889999999999
Q ss_pred cccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHh-ccCchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhh
Q 007654 413 GGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLG-MGWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYN 491 (594)
Q Consensus 413 ~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~-~~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg 491 (594)
..|++.||+++++. +.....+..++.+++. ..+...+.+..++.|+++|..+......+.|.+..++.|+.+|
T Consensus 268 ~~g~l~~r~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g 341 (399)
T PRK05122 268 LFGNLINRLGGLRV------AIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALG 341 (399)
T ss_pred HHHHHHHHhccHHH------HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 99999999876432 2223333444443333 2334456667788999999888888888889999999999999
Q ss_pred HHHhhhhHHHHHHHHHHHHHHHHhhhhcccCcccccccccccccCCCCCCCCCccccCcccHHHHHHHHHHHHHHHHHHH
Q 007654 492 FLTLANPAGSLVFSGLIASYIYDHEAEKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTSMIMSGLCIVAVILSM 571 (594)
Q Consensus 492 ~~~~a~~~g~~~~~~~l~G~iyd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~ 571 (594)
+......+|.. +++.+.|.+.|..+ |+..|.+.++++++++++.+
T Consensus 342 ~~~~~~~~g~~-~~~~~~g~l~~~~g----------------------------------~~~~~~~~~~~~~~~~~~~~ 386 (399)
T PRK05122 342 AYSVFLDLSLG-ITGPLAGLVASWFG----------------------------------YPSIFLAAALAALLGLALTW 386 (399)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHcC----------------------------------HHHHHHHHHHHHHHHHHHHH
Confidence 99988888876 47889999998754 89999999998888887777
Q ss_pred HHHhhhhh
Q 007654 572 ILVHRTTN 579 (594)
Q Consensus 572 ~l~~r~r~ 579 (594)
.+.+|++|
T Consensus 387 ~~~~~~~~ 394 (399)
T PRK05122 387 LLYRRAPR 394 (399)
T ss_pred Hhcccccc
Confidence 65554443
No 20
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.79 E-value=1.8e-17 Score=176.14 Aligned_cols=150 Identities=15% Similarity=0.104 Sum_probs=118.6
Q ss_pred hhhcchhHHHHHHHHHHHHhcCcc-cccccccHHHHhhhCCChhhHHHHHHHHhhhhh-cccchhhhhchhhhHHHHHHH
Q 007654 9 VSFFNNRWLVFVAAMWIQSCAGIG-YLFGSISPVIKSSLNYNQKQIARLGVAKDLGDS-VGFLAGSLCEVLPIWGALLVG 86 (594)
Q Consensus 9 ~~~~~~Rw~~l~a~~~i~l~~Gt~-Y~fS~ys~~Lk~~lg~sq~~l~~i~~a~~~G~~-~gi~~G~l~D~~gp~~~l~iG 86 (594)
|+...++|..+.+..+...+.+.. +.++...+++++++|+|.+|+.++.....++.. .+++.|.+.||+|+|.++.++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~ 83 (405)
T TIGR00891 4 RHLTRAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTS 83 (405)
T ss_pred CcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 345567888877777777776654 567888899999999999999998666666664 488999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHhhccccchhhhhHHHHHHHhcC-CCCCceehhhHhhhhhhHHHHHHHH
Q 007654 87 ALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVY 165 (594)
Q Consensus 87 ~~~~~~Gy~~~~l~~~g~i~~~s~~~l~~~~~l~g~G~~~~~taal~t~~k~FP-~~RG~~~Gl~~a~~GLSa~i~s~i~ 165 (594)
.++..++..+... . +++|.+...-++.|.+.+..+.+......+++| ++||.+.|+.-...++|..+-..+.
T Consensus 84 ~~~~~~~~~~~~~-----~--~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~ 156 (405)
T TIGR00891 84 IVLFSAGTLACGF-----A--PGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVY 156 (405)
T ss_pred HHHHHHHHHHHHH-----h--ccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 8887777665432 1 257777777778888888888888888899998 5699999999988888886665444
No 21
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.79 E-value=7.7e-17 Score=173.88 Aligned_cols=382 Identities=15% Similarity=0.110 Sum_probs=230.9
Q ss_pred chhHHHHHHHHHHHHhcCcccccccccHHHHhhhCCChhhHHHHHHHHhhhh-hcccchhhhhchhhhHHHHHHHHHHHH
Q 007654 13 NNRWLVFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGD-SVGFLAGSLCEVLPIWGALLVGALQNF 91 (594)
Q Consensus 13 ~~Rw~~l~a~~~i~l~~Gt~Y~fS~ys~~Lk~~lg~sq~~l~~i~~a~~~G~-~~gi~~G~l~D~~gp~~~l~iG~~~~~ 91 (594)
++.+...++....+...+..|. |-+++.+++|+|.+|+.++.....++. ...++.|.+.||+|+|.++.++.+...
T Consensus 13 ~~~~~~~l~~~~~~~~~~~~~~---~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~ 89 (402)
T TIGR00897 13 LNLLWGYIGVVVFMTGDGLEQG---WLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWC 89 (402)
T ss_pred chhhHHHHHHHHHHHhhhhHHH---hHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHH
Confidence 4445566666666777676664 335566789999999999766666665 458999999999999999999888876
Q ss_pred HHHHHHHHHHhcCCCChhHHHHHHHHHhhccccchhhhhHHHHHHHhcC-CCCCceehhhHhhhhhhHHHHHHHHHHhcC
Q 007654 92 IGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIHA 170 (594)
Q Consensus 92 ~Gy~~~~l~~~g~i~~~s~~~l~~~~~l~g~G~~~~~taal~t~~k~FP-~~RG~~~Gl~~a~~GLSa~i~s~i~~~~f~ 170 (594)
++..+. ...+.. ..++|.+.+..++.|.|.+....+......+++| ++||++.|+..+..+++..++.++.....-
T Consensus 90 ~~~~~~--~~~~~~-~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~ 166 (402)
T TIGR00897 90 VGHAAF--IVFGLG-HANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAI 166 (402)
T ss_pred HHHHHH--HHHhcc-CccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 665432 111221 1245666655556677766655555666777775 679999999988888875444433321110
Q ss_pred CChHHHHHHHHHHHHHHHHhhheeecccCCCCcCCCCCCCchhHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHH
Q 007654 171 PDHANLIFMVAVGPAMVVIALMFIIRPVGGHRQVRPSDSSSFTFIYSVCLLLAAYLMGVMLVEDLVDLNHTVIIIFTVIL 250 (594)
Q Consensus 171 ~~~~~fll~la~~~~~v~l~~~~~ir~~~~~~~~~~~~~~~f~~~~~~~~~l~~~l~~~~~~~~~~~~s~~~~~~~~~i~ 250 (594)
+ ..+. . ... .... .+..+.
T Consensus 167 ~-------------------------~~g~---------~---~~~----~~~~--------------------~~~~~~ 185 (402)
T TIGR00897 167 P-------------------------AFGE---------M---NTL----WSAL--------------------AFVLTG 185 (402)
T ss_pred c-------------------------ccch---------H---HHH----HHHH--------------------HHHHHH
Confidence 0 0000 0 000 0000 000000
Q ss_pred HHHhhhcchhhhhhcccccCCChhhhhhcCCCCCCCCCCCCCcchhhhhcccccCCCCccCCCchhHHHHHHHHHHHHHH
Q 007654 251 FVLLFIPIVIPIILSFFLERTDPAEEALLSKPENMEPGKSNQETDEVILSEVEDEKPKDVDLLPASERRKRIAQLQARLF 330 (594)
Q Consensus 251 ~~ll~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (594)
+++... +.+++++ |++.+ ++++. .
T Consensus 186 ~~~~~~---------~~~~~~~---------~~~~~----------------~~~~~-----------~----------- 209 (402)
T TIGR00897 186 GVIALF---------SNKDIFT---------PQHMQ----------------TREKF-----------S----------- 209 (402)
T ss_pred HHHHHh---------ccCCCCC---------ccccc----------------CCcch-----------h-----------
Confidence 000000 0000000 00000 00000 0
Q ss_pred hhhhhhhhhhhccCCCCCCCCCCHHHHhhcHHHHHHHHHHHhhhcchhheecchHHHHHHhCCCcch--hHHHHHHHhhh
Q 007654 331 HAAAEGAVRVKRRRGPHRGEDFTLTQALIKADFWLIFFSLLLGSGSGLTVIDNLGQMSQSLGYDNTH--IFVSMISIWNF 408 (594)
Q Consensus 331 ~~~~~~~~~~~~~~~p~~~~d~t~~e~l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~~~g~~~~~--~~Vsl~si~n~ 408 (594)
+ ....+++.+|++.+|.+.+..++....-.........+.+++|.+..+ ...++..+++.
T Consensus 210 ---------------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ 271 (402)
T TIGR00897 210 ---------------E---LGKAATILFTNPNVLLGGMVRIINTIGLFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNI 271 (402)
T ss_pred ---------------h---HHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHH
Confidence 0 000134678999999988777765544444455566666788887654 35678889999
Q ss_pred hhcccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHh---ccCchhHHHHHHHHHhhhhhccchhHHHHHHhhccCc
Q 007654 409 LGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLG---MGWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKK 485 (594)
Q Consensus 409 ~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~---~~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~ 485 (594)
+|++..|+++||++||+.. + ....+...+..+...... ......+++..++.|+++++... ....+.|. .+++
T Consensus 272 ig~~~~g~l~dr~~~~~~~-~-~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~-~~~~ 347 (402)
T TIGR00897 272 VFNVIFGIVGDKLGWMNTV-R-WFGGVGCGIFTLALYYIPQHFGHSFAVALIIAIALGIFLAGYVP-LAAVFPTL-APKH 347 (402)
T ss_pred HHHHHHHHHHHhhcchhHH-H-HHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHH-HHHHHHhh-Ccch
Confidence 9999999999999875432 1 111111111111111111 11233455677788888887644 34566776 4689
Q ss_pred hhhhhhHHHhhhhHHHHHHHHHHHHHHHHhhhhcccCcccccccccccccCCCCCCCCCccccCcccHHHHHHHHHHHHH
Q 007654 486 FGALYNFLTLANPAGSLVFSGLIASYIYDHEAEKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTSMIMSGLCIV 565 (594)
Q Consensus 486 ~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~ 565 (594)
.|+.+|+......+|+. ++|.+.|.++|..+ +...|.+.+++.++
T Consensus 348 ~g~~~g~~~~~~~lg~~-~gp~i~g~l~~~~g----------------------------------~~~~~~~~a~~~~i 392 (402)
T TIGR00897 348 KGAAMSVLNLSAGLSAF-LAPAIAVLFIGFFG----------------------------------AIGVVWIFAALYVV 392 (402)
T ss_pred hHHHHHHHHHHHHHHHH-HHHHHHHHHHhhcc----------------------------------hHHHHHHHHHHHHH
Confidence 99999999999999987 59999999999865 77888888888888
Q ss_pred HHHHHHHHH
Q 007654 566 AVILSMILV 574 (594)
Q Consensus 566 a~~ls~~l~ 574 (594)
+.++..+++
T Consensus 393 ~~~~~~~~~ 401 (402)
T TIGR00897 393 SAFLTAFIR 401 (402)
T ss_pred HHHHHHHhc
Confidence 877776643
No 22
>PRK12382 putative transporter; Provisional
Probab=99.78 E-value=2.1e-16 Score=169.17 Aligned_cols=351 Identities=15% Similarity=0.071 Sum_probs=210.2
Q ss_pred ccccccHHHHhhhCCChhhHHHHHHHHhhhhh-cccchhhhhchhhhHHHHHHHHHHHHHHHHHHHHH-HhcCCCChhHH
Q 007654 34 LFGSISPVIKSSLNYNQKQIARLGVAKDLGDS-VGFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLI-VTGRAPVLPLW 111 (594)
Q Consensus 34 ~fS~ys~~Lk~~lg~sq~~l~~i~~a~~~G~~-~gi~~G~l~D~~gp~~~l~iG~~~~~~Gy~~~~l~-~~g~i~~~s~~ 111 (594)
..++....+++++|+|.+|+..+..+..++.. ..++.|.+.||+|+|.++.+|.+...++.....+. ........+++
T Consensus 34 ~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (392)
T PRK12382 34 PLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSAPFKFA 113 (392)
T ss_pred HhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccchhHHHH
Confidence 34455556889999999999997666666654 48999999999999999998877655543322111 11111123566
Q ss_pred HHHHHHHhhccccchhhhhHHHHHHHhcC-CCCCceehhhHhhhhhhHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHh
Q 007654 112 AMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIHAPDHANLIFMVAVGPAMVVIA 190 (594)
Q Consensus 112 ~l~~~~~l~g~G~~~~~taal~t~~k~FP-~~RG~~~Gl~~a~~GLSa~i~s~i~~~~f~~~~~~fll~la~~~~~v~l~ 190 (594)
.+.+.-++.|.|.+...++......+++| ++||++.|+.-....++..+-..+.. .+
T Consensus 114 ~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~----------------------~l 171 (392)
T PRK12382 114 LLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGL----------------------LL 171 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHH----------------------HH
Confidence 66667777788888777777777788886 67999999865554444433322211 10
Q ss_pred hheeecccCCCCcCCCCCCCchhHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHhhhcchhhhhhcccccC
Q 007654 191 LMFIIRPVGGHRQVRPSDSSSFTFIYSVCLLLAAYLMGVMLVEDLVDLNHTVIIIFTVILFVLLFIPIVIPIILSFFLER 270 (594)
Q Consensus 191 ~~~~ir~~~~~~~~~~~~~~~f~~~~~~~~~l~~~l~~~~~~~~~~~~s~~~~~~~~~i~~~ll~~~~~~~~~~~~~~~~ 270 (594)
.. ..+ +.. .+ ....+..++... +..+.
T Consensus 172 ~~----~~g------------~~~---------~~-------------------~~~~~~~~~~~~---------~~~~~ 198 (392)
T PRK12382 172 HS----HFG------------FAA---------LA-------------------LTTMVLPLLAWA---------FNGTV 198 (392)
T ss_pred Hh----ccC------------hHH---------HH-------------------HHHHHHHHHHHH---------HHHhc
Confidence 00 000 000 00 000000000000 00000
Q ss_pred CChhhhhhcCCCCCCCCCCCCCcchhhhhcccccCCCCccCCCchhHHHHHHHHHHHHHHhhhhhhhhhhhccCCCCCCC
Q 007654 271 TDPAEEALLSKPENMEPGKSNQETDEVILSEVEDEKPKDVDLLPASERRKRIAQLQARLFHAAAEGAVRVKRRRGPHRGE 350 (594)
Q Consensus 271 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 350 (594)
++ +++ + ++++
T Consensus 199 ~~---------~~~-~----------------~~~~-------------------------------------------- 208 (392)
T PRK12382 199 RK---------VPA-H----------------AGER-------------------------------------------- 208 (392)
T ss_pred cC---------CCC-C----------------cccC--------------------------------------------
Confidence 00 000 0 0000
Q ss_pred CCCHHHHhhcHHHHHHHHHHHhhhcchhhee-cchHHHHHHhCCCcchhHHHHHHHhhhhhcccccchhhhhhhccCCch
Q 007654 351 DFTLTQALIKADFWLIFFSLLLGSGSGLTVI-DNLGQMSQSLGYDNTHIFVSMISIWNFLGRVGGGYFSEIIVRDYAYPR 429 (594)
Q Consensus 351 d~t~~e~l~t~~Fwll~~~~~~~~g~Gl~vi-~n~~~i~~~~g~~~~~~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r 429 (594)
.+.++.+| .+|...+..++ .+.+...+ ....+..++.+.+......+..++++.++++.+|.++||+++++..
T Consensus 209 -~~~~~~~~--~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~-- 282 (392)
T PRK12382 209 -PSLWSVVG--LIWKPGLGLAL-QGVGFAVIGTFVSLYFASKGWAMAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVA-- 282 (392)
T ss_pred -chHHHHHH--HHHHhHHHHHH-HHHHHhHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeh--
Confidence 00111111 22222111111 11112112 2233455566665544566778889999999999999999885543
Q ss_pred hHHHHHHHHHHHHHHHHHh-ccCchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHH
Q 007654 430 PVAMAVAQFVMAIGHIFLG-MGWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLI 508 (594)
Q Consensus 430 ~~~l~~~~~~~~~~~ll~~-~~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l 508 (594)
.....+..++.+++. ..+...+++..++.|+++|..+...+..+.|.+..++.|+.+|+..+...+|.. ++|.+
T Consensus 283 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~-ig~~~ 357 (392)
T PRK12382 283 ----IVSLLVETVGLLLLWLAPTAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYG-VSGPL 357 (392)
T ss_pred ----HHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH-HHHHH
Confidence 222333333433332 233345666788889999988888888999999999999999999998888887 58999
Q ss_pred HHHHHHhhhhcccCcccccccccccccCCCCCCCCCccccCcccHHHHHHHHHHHHHHHHHHHHHH
Q 007654 509 ASYIYDHEAEKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTSMIMSGLCIVAVILSMILV 574 (594)
Q Consensus 509 ~G~iyd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~~l~ 574 (594)
.|.+.|+.+ |+..|.+.+.+.++++++.+...
T Consensus 358 ~g~l~~~~g----------------------------------~~~~~~~~~~~~~~~~~~~~~~~ 389 (392)
T PRK12382 358 AGMLATSFG----------------------------------YPSVFLAGAISAVLGIIVTILSF 389 (392)
T ss_pred HHHHHHHhC----------------------------------chHHHHHHHHHHHHHHHHHHhhc
Confidence 999999765 89999999988888877665443
No 23
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.77 E-value=9.6e-17 Score=176.01 Aligned_cols=380 Identities=14% Similarity=0.187 Sum_probs=227.1
Q ss_pred HHhcCcccccccccHHHHh-hhCCChhhHHHH-HHHHhhhhhcccchhhhhchhhhHHHHHHHHHHHHHHHHHHHHHHhc
Q 007654 26 QSCAGIGYLFGSISPVIKS-SLNYNQKQIARL-GVAKDLGDSVGFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTG 103 (594)
Q Consensus 26 ~l~~Gt~Y~fS~ys~~Lk~-~lg~sq~~l~~i-~~a~~~G~~~gi~~G~l~D~~gp~~~l~iG~~~~~~Gy~~~~l~~~g 103 (594)
.++--.-+.||.-.+++++ ++|+|.+|+.++ ++....+...-++.|.+.||+|+|.+..++.++..++..++..+.+.
T Consensus 44 ~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~ 123 (462)
T PRK15034 44 LLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQN 123 (462)
T ss_pred HHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcc
Confidence 3333445667777778766 799999999997 54555555556999999999999999999999887777765544433
Q ss_pred CCCChhHHHHHHHHHhhccccchhhhhHHHHHHHhcCC-CCCceehhhHhhhhhhHHHHHHHHHHhcCCChHHHHHHHHH
Q 007654 104 RAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPK-SRGPVVGILKGFAGLGGAILTQVYTMIHAPDHANLIFMVAV 182 (594)
Q Consensus 104 ~i~~~s~~~l~~~~~l~g~G~~~~~taal~t~~k~FP~-~RG~~~Gl~~a~~GLSa~i~s~i~~~~f~~~~~~fll~la~ 182 (594)
.. ++++.+.+..++.|.+ +..+.+++....+|||+ +||++.|+..+.-.+|+.+...+.
T Consensus 124 ~~--~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~----------------- 183 (462)
T PRK15034 124 PN--TPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVA----------------- 183 (462)
T ss_pred cC--CCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHH-----------------
Confidence 33 3578888777777766 55778899999999995 599999999755555555443222
Q ss_pred HHHHHH--HhhheeecccCCCCcCCCCCCCchhHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHhhhcchh
Q 007654 183 GPAMVV--IALMFIIRPVGGHRQVRPSDSSSFTFIYSVCLLLAAYLMGVMLVEDLVDLNHTVIIIFTVILFVLLFIPIVI 260 (594)
Q Consensus 183 ~~~~v~--l~~~~~ir~~~~~~~~~~~~~~~f~~~~~~~~~l~~~l~~~~~~~~~~~~s~~~~~~~~~i~~~ll~~~~~~ 260 (594)
|.++. +...+--+.+.. ...... .+..... .+.+..++....
T Consensus 184 -p~~i~~~l~~~~G~~~~~~------~~g~~~------------------------~~~~~~~-~~~~~~iv~~i~---- 227 (462)
T PRK15034 184 -PLVIFVPVFAFLGVNGVPQ------ADGSVM------------------------SLANAAW-IWVPLLAIATIA---- 227 (462)
T ss_pred -HHHHHHHHHHHhccccccc------cccchH------------------------HHHHHHH-HHHHHHHHHHHH----
Confidence 11111 111100000000 000000 0000000 111101000000
Q ss_pred hhhhcccccCCChhhhhhcCCCCCCCCCCCCCcchhhhhcccccCCCCccCCCchhHHHHHHHHHHHHHHhhhhhhhhhh
Q 007654 261 PIILSFFLERTDPAEEALLSKPENMEPGKSNQETDEVILSEVEDEKPKDVDLLPASERRKRIAQLQARLFHAAAEGAVRV 340 (594)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (594)
.++. +++++ +++.
T Consensus 228 ----~~~~----------~~~~~--------------------~~~~--------------------------------- 240 (462)
T PRK15034 228 ----AWSG----------MNDIA--------------------SSRA--------------------------------- 240 (462)
T ss_pred ----HHHh----------CCCcc--------------------cccc---------------------------------
Confidence 0100 00000 0000
Q ss_pred hccCCCCCCCCCCHHHHhhcHHHHHHHHHHHhhhcchhheecchHHHHHHhCCCcchh--HHHHHHHhhhhhcccccchh
Q 007654 341 KRRRGPHRGEDFTLTQALIKADFWLIFFSLLLGSGSGLTVIDNLGQMSQSLGYDNTHI--FVSMISIWNFLGRVGGGYFS 418 (594)
Q Consensus 341 ~~~~~p~~~~d~t~~e~l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~~~g~~~~~~--~Vsl~si~n~~GRl~~G~ls 418 (594)
. -...++.+|+++-|++.+.+++.-|+=....+-.....++ .++.... ...+..+...+.|+++|+++
T Consensus 241 -----~----~~~~~~vlk~~~~Wllslly~~tFG~fvg~s~~lp~~~~~-~~~~~~~l~~~~l~~l~~~l~rplgG~LA 310 (462)
T PRK15034 241 -----S----IADQLPVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKT-QFPDVNILRLAFFGPFIGAIARSVGGAIS 310 (462)
T ss_pred -----C----HHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH-HcChHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 0 0012468899999999999888766555444445455544 3333222 34566788999999999999
Q ss_pred hhhhhccCCchhHHHHHHHHHHHHHH---HHHhccC---c-h----hHHHHHHHHHhhhhhccchhHHHHHH--h-----
Q 007654 419 EIIVRDYAYPRPVAMAVAQFVMAIGH---IFLGMGW---P-G----AMYVGTLLIGLGYGAHWAIVPAAASE--L----- 480 (594)
Q Consensus 419 D~l~r~~~~~r~~~l~~~~~~~~~~~---ll~~~~~---~-~----~l~~~~~liG~~~G~~~~l~p~i~s~--~----- 480 (594)
||+++++.. ....+++.+.. .++.... + . .++...+..|++.|+.|-+.|.+-.+ -
T Consensus 311 DRiG~~~vl------~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~ 384 (462)
T PRK15034 311 DKFGGVRVT------LINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKM 384 (462)
T ss_pred HhcCchHHH------HHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccc
Confidence 999885432 12222222221 1111111 1 1 12223344578888888877776652 1
Q ss_pred ----------hccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHHhhhhcccCcccccccccccccCCCCCCCCCccccCc
Q 007654 481 ----------FGLKKFGALYNFLTLANPAGSLVFSGLIASYIYDHEAEKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSI 550 (594)
Q Consensus 481 ----------FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~ 550 (594)
-..|+-|..=|++....++|+++ -|.++|..+|.+|
T Consensus 385 ~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~-~p~~~g~~~~~~g--------------------------------- 430 (462)
T PRK15034 385 KGGSDEQAQREAVTETAAALGFISAIGAVGGFF-IPQAFGMSLNMTG--------------------------------- 430 (462)
T ss_pred cccchhHHhhHHHHHHHHHHHHHHHHHHcccch-hhHHHHHHHHHcC---------------------------------
Confidence 11136888889988888999985 5889999999886
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 007654 551 CYFLTSMIMSGLCIVAVILSMILVHRTT 578 (594)
Q Consensus 551 Cy~~~f~i~~~~~~~a~~ls~~l~~r~r 578 (594)
.|...|++..+..+++++++.+...|++
T Consensus 431 ~~~~~~~~~~~~~~~~~~~~w~~y~r~~ 458 (462)
T PRK15034 431 SPVGAMKVFLIFYIVCVLLTWLVYGRRK 458 (462)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 5899999999999998888888777654
No 24
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.77 E-value=5.8e-17 Score=171.18 Aligned_cols=330 Identities=15% Similarity=0.091 Sum_probs=209.5
Q ss_pred cccccccHHHHhhhCCChhhHHHHHHHHhhhhhc-ccchhhhhchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHH
Q 007654 33 YLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLW 111 (594)
Q Consensus 33 Y~fS~ys~~Lk~~lg~sq~~l~~i~~a~~~G~~~-gi~~G~l~D~~gp~~~l~iG~~~~~~Gy~~~~l~~~g~i~~~s~~ 111 (594)
.+++..-|++++++|+|.++..++.....++..+ +++.|.+.||+|+|.++.+|.+....+.... ..+ +.+
T Consensus 17 ~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~------~~~--~~~ 88 (355)
T TIGR00896 17 TSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR------SAP--GTA 88 (355)
T ss_pred ccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH------Hhc--cHH
Confidence 4677888999999999999999987777777754 8899999999999999999888766665532 112 345
Q ss_pred HHHHHHHhhccccchhhhhHHHHHHHhcCCCCCceehhhHhhhhhhHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHhh
Q 007654 112 AMCILIFVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAILTQVYTMIHAPDHANLIFMVAVGPAMVVIAL 191 (594)
Q Consensus 112 ~l~~~~~l~g~G~~~~~taal~t~~k~FP~~RG~~~Gl~~a~~GLSa~i~s~i~~~~f~~~~~~fll~la~~~~~v~l~~ 191 (594)
.+.+..++.|.|.+...++......++||++||++.|+.....+++..+-..+...+-+.
T Consensus 89 ~l~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~-------------------- 148 (355)
T TIGR00896 89 LLFAGTALIGVGIAIINVLLPSLIKRDFPQRVGLMTGLYSMALMGGAALAAAATVPLAQH-------------------- 148 (355)
T ss_pred HHHHHHHHHHHHHHHHhccchHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh--------------------
Confidence 555566666777776666666666788999999999998888888776554332110000
Q ss_pred heeecccCCCCcCCCCCCCchhHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHhhhcchhhhhhcccccCC
Q 007654 192 MFIIRPVGGHRQVRPSDSSSFTFIYSVCLLLAAYLMGVMLVEDLVDLNHTVIIIFTVILFVLLFIPIVIPIILSFFLERT 271 (594)
Q Consensus 192 ~~~ir~~~~~~~~~~~~~~~f~~~~~~~~~l~~~l~~~~~~~~~~~~s~~~~~~~~~i~~~ll~~~~~~~~~~~~~~~~~ 271 (594)
.. ......+ ...++..++.... +..
T Consensus 149 ------~~----------~~w~~~f---------------------------~~~~~~~~~~~~~---------~~~--- 173 (355)
T TIGR00896 149 ------SG----------GHWQQAL---------------------------AWWALPALLALLA---------WIP--- 173 (355)
T ss_pred ------hh----------hhHHHHH---------------------------HHHHHHHHHHHHH---------Hhh---
Confidence 00 0000000 0000000000000 000
Q ss_pred ChhhhhhcCCCCCCCCCCCCCcchhhhhcccccCCCCccCCCchhHHHHHHHHHHHHHHhhhhhhhhhhhccCCCCCCCC
Q 007654 272 DPAEEALLSKPENMEPGKSNQETDEVILSEVEDEKPKDVDLLPASERRKRIAQLQARLFHAAAEGAVRVKRRRGPHRGED 351 (594)
Q Consensus 272 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~d 351 (594)
+. +++ ++ ++++ + .+
T Consensus 174 ~~------~~~---~~----------------~~~~--------------------------------------~---~~ 187 (355)
T TIGR00896 174 QV------RRR---VA----------------ANQT--------------------------------------T---TR 187 (355)
T ss_pred hh------ccc---cC----------------CCCC--------------------------------------C---CC
Confidence 00 000 00 0000 0 01
Q ss_pred CCHHHHhhcHHHHHHHHHHHhhhcchhheecchHHHHHHhCCCcch--hHHHHHHHhhhhhcccccchhhhhhhccCCch
Q 007654 352 FTLTQALIKADFWLIFFSLLLGSGSGLTVIDNLGQMSQSLGYDNTH--IFVSMISIWNFLGRVGGGYFSEIIVRDYAYPR 429 (594)
Q Consensus 352 ~t~~e~l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~~~g~~~~~--~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r 429 (594)
.+.++++|++++|.+.+.+++....-..+.+.+..+.++.|.+... ...+++.++..+||+.+|+++||+++++.
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~--- 264 (355)
T TIGR00896 188 LTPVRIWRSPLAWQVTVFFGLQSGLYYSLIGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRG--- 264 (355)
T ss_pred CCCchhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchH---
Confidence 1235678999999887776665555555556677788888887643 47889999999999999999999954332
Q ss_pred hHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHhhhhhccchhHHHHHHhhcc-CchhhhhhHHHhhhhHHHHHHHHHH
Q 007654 430 PVAMAVAQFVMAIGHIFLGMGWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGL-KKFGALYNFLTLANPAGSLVFSGLI 508 (594)
Q Consensus 430 ~~~l~~~~~~~~~~~ll~~~~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~-k~~g~nyg~~~~a~~~g~~~~~~~l 508 (594)
.+....++..++.+.+............++.|+++|..+.+....+.+.+.. ++.|+.+|+......++.. ++|.+
T Consensus 265 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~gp~~ 341 (355)
T TIGR00896 265 --IVAVLAVLQLVGLCGLLFAPMHGLWAWALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAA-LGPLF 341 (355)
T ss_pred --HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHH-HHHHH
Confidence 1223333344443333322211222346788999999998888887776654 5568888887766666666 58999
Q ss_pred HHHHHHhhh
Q 007654 509 ASYIYDHEA 517 (594)
Q Consensus 509 ~G~iyd~~~ 517 (594)
.|.++|+++
T Consensus 342 ~G~l~~~~g 350 (355)
T TIGR00896 342 VGVLHDISG 350 (355)
T ss_pred HHHHHHHhc
Confidence 999999987
No 25
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.77 E-value=7.3e-17 Score=174.08 Aligned_cols=127 Identities=15% Similarity=0.052 Sum_probs=95.0
Q ss_pred cccccHHHHhhhCCC--------hhhHHHHHHHHhhhh-hcccchhhhhchhhhHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 007654 35 FGSISPVIKSSLNYN--------QKQIARLGVAKDLGD-SVGFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRA 105 (594)
Q Consensus 35 fS~ys~~Lk~~lg~s--------q~~l~~i~~a~~~G~-~~gi~~G~l~D~~gp~~~l~iG~~~~~~Gy~~~~l~~~g~i 105 (594)
.+..-+.++.+++++ +.|.+.+.....++. ..+++.|.+.||+|||.++.++.++..+|..+..+. ...
T Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~--~~~ 124 (481)
T TIGR00879 47 IGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLA--AFA 124 (481)
T ss_pred hhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHh--ccc
Confidence 333445666666666 889999866666666 458899999999999999999999887777654322 211
Q ss_pred CChhHHHHHHHHHhhccccchhhhhHHHHHHHhcC-CCCCceehhhHhhhhhhHHHHHHHH
Q 007654 106 PVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVY 165 (594)
Q Consensus 106 ~~~s~~~l~~~~~l~g~G~~~~~taal~t~~k~FP-~~RG~~~Gl~~a~~GLSa~i~s~i~ 165 (594)
.++|.+.+.-++.|.|.+..+........+++| ++||++.|+.-.+..+|..+-..+.
T Consensus 125 --~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~ 183 (481)
T TIGR00879 125 --LSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFG 183 (481)
T ss_pred --cchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 235666677777888888888888888889997 5699999999888888876665444
No 26
>TIGR00895 2A0115 benzoate transport.
Probab=99.76 E-value=4.4e-17 Score=172.18 Aligned_cols=374 Identities=13% Similarity=0.123 Sum_probs=221.0
Q ss_pred cchhHHHHHHHHHHHHhcCc-ccccccccHHHHhhhCCChhhHHHHHHHHhhhhhc-ccchhhhhchhhhHHHHHHHHHH
Q 007654 12 FNNRWLVFVAAMWIQSCAGI-GYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQ 89 (594)
Q Consensus 12 ~~~Rw~~l~a~~~i~l~~Gt-~Y~fS~ys~~Lk~~lg~sq~~l~~i~~a~~~G~~~-gi~~G~l~D~~gp~~~l~iG~~~ 89 (594)
.+++|..++.+.+...+.|. .+.++.+.|.+.+++|+|..+...+.....++..+ .++.|.+.||+|+|.++.++.++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~ 91 (398)
T TIGR00895 12 SRYQWRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILL 91 (398)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHH
Confidence 34567777777766666654 46788899999999999999999986666666644 78899999999999999999888
Q ss_pred HHHHHHHHHHHHhcCCCChhHHHHHHHHHhhccccchhhhhHHHHHHHhcC-CCCCceehhhHhhhhhhHHHHHHHHHHh
Q 007654 90 NFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMI 168 (594)
Q Consensus 90 ~~~Gy~~~~l~~~g~i~~~s~~~l~~~~~l~g~G~~~~~taal~t~~k~FP-~~RG~~~Gl~~a~~GLSa~i~s~i~~~~ 168 (594)
..+++.+.... .++|.+.+..++.|.+.+..+.+......+++| ++||++.|+......+++.+-..+...+
T Consensus 92 ~~~~~~~~~~~-------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 164 (398)
T TIGR00895 92 FSVFTLLCALA-------TNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWL 164 (398)
T ss_pred HHHHHHHHHHc-------cchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHH
Confidence 77777654322 246666666777788888888888888889998 4699999998888888876655443211
Q ss_pred cCCChHH-HHHHHHHHHHHHHHhhheeecccCCCCcCCCCCCCchhHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHH
Q 007654 169 HAPDHAN-LIFMVAVGPAMVVIALMFIIRPVGGHRQVRPSDSSSFTFIYSVCLLLAAYLMGVMLVEDLVDLNHTVIIIFT 247 (594)
Q Consensus 169 f~~~~~~-fll~la~~~~~v~l~~~~~ir~~~~~~~~~~~~~~~f~~~~~~~~~l~~~l~~~~~~~~~~~~s~~~~~~~~ 247 (594)
.+..... .+...+..+.+..++
T Consensus 165 ~~~~g~~~~~~~~~~~~~~~~~~--------------------------------------------------------- 187 (398)
T TIGR00895 165 IPVFGWRSLFYVGGIAPLLLLLL--------------------------------------------------------- 187 (398)
T ss_pred hhcccceeehhhhhhHHHHHHHH---------------------------------------------------------
Confidence 1100000 000000000000000
Q ss_pred HHHHHHhhhcchhhhhhcccccCCChhhhhhcCCCCCCCCCCCCCcchhhhhcccccCCCCccC-CCchhHHHHHHHHHH
Q 007654 248 VILFVLLFIPIVIPIILSFFLERTDPAEEALLSKPENMEPGKSNQETDEVILSEVEDEKPKDVD-LLPASERRKRIAQLQ 326 (594)
Q Consensus 248 ~i~~~ll~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 326 (594)
... +.+++++...+ ++ +++ ..+. .++.+++...+.+ ..+. +
T Consensus 188 ------~~~---------~~~~~~~~~~~----~~---~~~-----~~~~-~~~~~~~~~~~~~~~~~~-~--------- 229 (398)
T TIGR00895 188 ------LMR---------FLPESIDFLVS----KR---PET-----VRRI-VNAIAPQMQAEAQSALPE-Q--------- 229 (398)
T ss_pred ------HHH---------hCCCCChHHHh----cC---HHH-----HHHH-HHHHHHhccccccccccc-c---------
Confidence 000 00000000000 00 000 0000 0000000000000 0000 0
Q ss_pred HHHHhhhhhhhhhhhccCCCCCCCCCCHHH----HhhcHHHHHHHHHHHhhhcchhheecchHHHHHHhCCCcch--hHH
Q 007654 327 ARLFHAAAEGAVRVKRRRGPHRGEDFTLTQ----ALIKADFWLIFFSLLLGSGSGLTVIDNLGQMSQSLGYDNTH--IFV 400 (594)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~p~~~~d~t~~e----~l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~~~g~~~~~--~~V 400 (594)
+++ ++ ......+ ..+.+.+|.++..+++.......+.+....+.++.|.+... ...
T Consensus 230 --------------~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 291 (398)
T TIGR00895 230 --------------KAT--QG--TKRSVFKALFQGKTARITVLLWLLYFMLLVGVYFLTNWLPKLMVELGFSLSLAATGG 291 (398)
T ss_pred --------------ccc--cc--hhhHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 000 00 0001111 11234556666555544333333333344555667777643 377
Q ss_pred HHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHh-ccCchhHHHHHHHHHhhhhhccchhHHHHHH
Q 007654 401 SMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLG-MGWPGAMYVGTLLIGLGYGAHWAIVPAAASE 479 (594)
Q Consensus 401 sl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~-~~~~~~l~~~~~liG~~~G~~~~l~p~i~s~ 479 (594)
++.+++..+|++++|+++||++|+ . .. ...........++.. ..+...+++..++.|+++|.......+++.|
T Consensus 292 ~~~~~~~~~~~~~~~~l~~~~~~~-~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 365 (398)
T TIGR00895 292 ALFNFGGVIGSIIFGWLADRLGPR-V----TA-LLLLLGAVFAVLVGSTLFSPTLLLLLGAIAGFFVNGGQSGLYALMAL 365 (398)
T ss_pred HHHHHHHHHHHHHHHHHHhhcchH-H----HH-HHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 889999999999999999999774 1 11 111222222222222 3344456778889999999999999999999
Q ss_pred hhccCchhhhhhHHHhhhhHHHHHHHHHHHHHH
Q 007654 480 LFGLKKFGALYNFLTLANPAGSLVFSGLIASYI 512 (594)
Q Consensus 480 ~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~i 512 (594)
.+..++-|+.+|+......+|.. ++|.+.|.+
T Consensus 366 ~~~~~~~g~~~g~~~~~~~~g~~-~g~~~~G~l 397 (398)
T TIGR00895 366 FYPTAIRATGVGWAIGIGRLGAI-IGPILAGYL 397 (398)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHH-HHHHhHHhc
Confidence 99999999999999988888887 589998865
No 27
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.75 E-value=3.4e-16 Score=165.96 Aligned_cols=359 Identities=18% Similarity=0.226 Sum_probs=235.9
Q ss_pred ccccccccHHHHhhhCCChhhHHHH-HHHHhhhhhcccchhhhhchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCChhH
Q 007654 32 GYLFGSISPVIKSSLNYNQKQIARL-GVAKDLGDSVGFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPL 110 (594)
Q Consensus 32 ~Y~fS~ys~~Lk~~lg~sq~~l~~i-~~a~~~G~~~gi~~G~l~D~~gp~~~l~iG~~~~~~Gy~~~~l~~~g~i~~~s~ 110 (594)
=+.||.-.+++++.+|+|..|..++ ++-...|..+=++-|++.||+|||.+..++.++..+=..+ +++...-+ ++
T Consensus 30 W~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~--~~~a~~~~--~~ 105 (417)
T COG2223 30 WTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLG--LAFAVTYP--ST 105 (417)
T ss_pred HHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHH--HHHHccCC--ch
Confidence 3567777789999999999999996 8888889888999999999999999888888875555444 34444333 46
Q ss_pred HHHHHHHHhhccccchhhhhHHHHHHHhcCC-CCCceehhhHhhhhhhHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHH
Q 007654 111 WAMCILIFVGNNGETYFNTAALVSCVQNFPK-SRGPVVGILKGFAGLGGAILTQVYTMIHAPDHANLIFMVAVGPAMVVI 189 (594)
Q Consensus 111 ~~l~~~~~l~g~G~~~~~taal~t~~k~FP~-~RG~~~Gl~~a~~GLSa~i~s~i~~~~f~~~~~~fll~la~~~~~v~l 189 (594)
|++.+..++.|.+.+- +...+...-+|||+ ++|++.||-- -|=.+.-.+|+.. |.++..
T Consensus 106 ~~ll~~gll~G~~Gas-Fav~m~~~s~~fP~~~qG~AlGI~g--~GN~G~av~q~~~-----------------P~v~~~ 165 (417)
T COG2223 106 WQLLVIGLLLGLAGAS-FAVGMPNASFFFPKEKQGLALGIAG--AGNLGVAVAQLVA-----------------PLVAVA 165 (417)
T ss_pred HHHHHHHHHHhcccce-ehcccccccccCChhhhhHHHHHhc--cccccHHHHHHHH-----------------HHHHHH
Confidence 8887777776664442 35778999999985 6899999976 3333333333321 222222
Q ss_pred hhheeecccCCCCcCCCCCCCchhHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHhhhcchhhhhhccccc
Q 007654 190 ALMFIIRPVGGHRQVRPSDSSSFTFIYSVCLLLAAYLMGVMLVEDLVDLNHTVIIIFTVILFVLLFIPIVIPIILSFFLE 269 (594)
Q Consensus 190 ~~~~~ir~~~~~~~~~~~~~~~f~~~~~~~~~l~~~l~~~~~~~~~~~~s~~~~~~~~~i~~~ll~~~~~~~~~~~~~~~ 269 (594)
.+.-. ...+. ..+.+.+++ -.. ..++.
T Consensus 166 ~g~~~-------------------------------------------w~~~~-~i~~~~l~v-~~v-------~~~~~- 192 (417)
T COG2223 166 FGFLA-------------------------------------------WRNVA-GIYVVALAI-AAV-------LAWLG- 192 (417)
T ss_pred HhhHH-------------------------------------------HHHHH-HHHHHHHHH-HHH-------HHHHH-
Confidence 11000 00000 011111100 000 00100
Q ss_pred CCChhhhhhcCCCCCCCCCCCCCcchhhhhcccccCCCCccCCCchhHHHHHHHHHHHHHHhhhhhhhhhhhccCCCCCC
Q 007654 270 RTDPAEEALLSKPENMEPGKSNQETDEVILSEVEDEKPKDVDLLPASERRKRIAQLQARLFHAAAEGAVRVKRRRGPHRG 349 (594)
Q Consensus 270 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 349 (594)
+++.+ +.+++ ..+.
T Consensus 193 ---------~~d~p--------------------~~r~~-----------------------------------~~~~-- 206 (417)
T COG2223 193 ---------MNDVP--------------------EHRAS-----------------------------------VKPQ-- 206 (417)
T ss_pred ---------hCCCh--------------------hhhcc-----------------------------------cccc--
Confidence 00000 00000 0000
Q ss_pred CCCCHHHHhhcHHHHHHHHHHHhhhcchhheecchHHHHHHh-CCCcch--hHHHHHHHhhhhhcccccchhhhhhhccC
Q 007654 350 EDFTLTQALIKADFWLIFFSLLLGSGSGLTVIDNLGQMSQSL-GYDNTH--IFVSMISIWNFLGRVGGGYFSEIIVRDYA 426 (594)
Q Consensus 350 ~d~t~~e~l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~~~-g~~~~~--~~Vsl~si~n~~GRl~~G~lsD~l~r~~~ 426 (594)
.+...+.+.+++|-|.+.+.++..-|+=....+-+.+..++. |.++.+ ...+++.+.+.+-|..+|++|||++.+|.
T Consensus 207 ~~~~~~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv 286 (417)
T COG2223 207 LPAQLKAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRV 286 (417)
T ss_pred chhHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhH
Confidence 012234567899999999999988888777888888888874 777654 58899999999999999999999988553
Q ss_pred CchhHHHHHHHHHHHHHHHHHhcc-------Cc-h----hHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHH
Q 007654 427 YPRPVAMAVAQFVMAIGHIFLGMG-------WP-G----AMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLT 494 (594)
Q Consensus 427 ~~r~~~l~~~~~~~~~~~ll~~~~-------~~-~----~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~ 494 (594)
. .+....++++..++... .+ . .+....+..|++.|+.|-+.|.+-.+ +.|..=|++.
T Consensus 287 ~------~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~-----~~G~v~G~vg 355 (417)
T COG2223 287 T------LAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPK-----ETGAVTGIVG 355 (417)
T ss_pred H------HHHHHHHHHHHHHHHccccccccCcchHHHHHHHHHHHHHhccCcchheeechHHHHh-----hhhHHHHHHH
Confidence 2 22223333332222111 11 1 23444556677788888877776655 8888899999
Q ss_pred hhhhHHHHHHHHHHHHHHHHhhhhcccCcccccccccccccCCCCCCCCCccccCcccHHHHHHHHHHHHHHHHHHHHHH
Q 007654 495 LANPAGSLVFSGLIASYIYDHEAEKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTSMIMSGLCIVAVILSMILV 574 (594)
Q Consensus 495 ~a~~~g~~~~~~~l~G~iyd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~~l~ 574 (594)
...++|++. =|...|..+|.+| .|+..|++....+++++++...++
T Consensus 356 a~G~lGGf~-lp~~~g~~~~~tg---------------------------------~~~~~f~~~~~~~~~a~v~~~~~y 401 (417)
T COG2223 356 AIGGLGGFF-LPLAFGVSLDLTG---------------------------------SYTGAFMLLLAFYLVALVLTWALY 401 (417)
T ss_pred Hhccccccc-hhHHHHHHHHhcc---------------------------------cHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999985 5899999999987 589999999999999999988888
Q ss_pred hhhh
Q 007654 575 HRTT 578 (594)
Q Consensus 575 ~r~r 578 (594)
.|+|
T Consensus 402 ~r~~ 405 (417)
T COG2223 402 ARRR 405 (417)
T ss_pred Hhcc
Confidence 8875
No 28
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.73 E-value=3.6e-16 Score=171.60 Aligned_cols=378 Identities=14% Similarity=0.142 Sum_probs=227.0
Q ss_pred hhCCChhhHHHHHHHHhhhhhc-ccchhhhhchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHhhccc
Q 007654 45 SLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNG 123 (594)
Q Consensus 45 ~lg~sq~~l~~i~~a~~~G~~~-gi~~G~l~D~~gp~~~l~iG~~~~~~Gy~~~~l~~~g~i~~~s~~~l~~~~~l~g~G 123 (594)
++++|.++...+..+..++..+ +++.|.+.||+|+|.++.++.++..++..+....... +++.+.+..++.|.+
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~-----~~~~l~~~r~~~G~~ 144 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGG-----GIALVVFCRVIQGLA 144 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHc-----CchHHHHHHHHHHHh
Confidence 6899999999987667777654 7899999999999999999988877776654333221 345556667777888
Q ss_pred cchhhhhHHHHHHHhcC-CCCCceehhhHhhhhhhHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHhhheeecccCCCC
Q 007654 124 ETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIHAPDHANLIFMVAVGPAMVVIALMFIIRPVGGHR 202 (594)
Q Consensus 124 ~~~~~taal~t~~k~FP-~~RG~~~Gl~~a~~GLSa~i~s~i~~~~f~~~~~~fll~la~~~~~v~l~~~~~ir~~~~~~ 202 (594)
.+..+.+......+||| ++||++.|+...+..++..+-..+...+... + .+.
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~----------------------~---~gw-- 197 (465)
T TIGR00894 145 QGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCES----------------------W---GGW-- 197 (465)
T ss_pred cccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------------------c---CCC--
Confidence 88888888899999998 5799999999998888887765444211000 0 000
Q ss_pred cCCCCCCCchhHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHhhhcchhhhhhcccccCCChhhhhhcCCC
Q 007654 203 QVRPSDSSSFTFIYSVCLLLAAYLMGVMLVEDLVDLNHTVIIIFTVILFVLLFIPIVIPIILSFFLERTDPAEEALLSKP 282 (594)
Q Consensus 203 ~~~~~~~~~f~~~~~~~~~l~~~l~~~~~~~~~~~~s~~~~~~~~~i~~~ll~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 282 (594)
+..|.. .+ .+.++..++... +. ++++
T Consensus 198 ------~~~f~i------------~~----------------~~~~~~~~~~~~---------~~--~~~p--------- 223 (465)
T TIGR00894 198 ------PMIFYV------------FG----------------IVGCAWSLLWFV---------FP--ADDP--------- 223 (465)
T ss_pred ------Ceehhh------------hh----------------HHHHHHHHHHHH---------Hh--cCCc---------
Confidence 000000 00 011111110100 00 0011
Q ss_pred CCCCCCCCCCcchhhhhcccccCCCCccCCCchhHHHHHHHHHHHHHHhhhhhhhhhhhccCCCCCCCCCCHHHHhhcHH
Q 007654 283 ENMEPGKSNQETDEVILSEVEDEKPKDVDLLPASERRKRIAQLQARLFHAAAEGAVRVKRRRGPHRGEDFTLTQALIKAD 362 (594)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~d~t~~e~l~t~~ 362 (594)
+++...+ + +|+. . .++ ..+ .+.+ +. .....+++.+++++
T Consensus 224 -~~~~~~~----~--------------------~~~~-~---i~~-----~~~----~~~~--~~-~~~~~~~~~~~~~~ 262 (465)
T TIGR00894 224 -SIHPCIS----K--------------------FEKK-Y---INS-----SLQ----GQKG--ST-RQSLPIKAIPKSLP 262 (465)
T ss_pred -ccCCCCC----H--------------------HHHH-H---HHh-----hcc----cccC--CC-CCCCCHHHHhcCHH
Confidence 0000000 0 0000 0 000 000 0000 00 01235789999999
Q ss_pred HHHHHHHHHhhhcchhheecchHHHHHH-hCCCcch--hHHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHH--HH
Q 007654 363 FWLIFFSLLLGSGSGLTVIDNLGQMSQS-LGYDNTH--IFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAV--AQ 437 (594)
Q Consensus 363 Fwll~~~~~~~~g~Gl~vi~n~~~i~~~-~g~~~~~--~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~--~~ 437 (594)
+|.+++..++.......+...+....++ +|.+... ...++..++..+++++.|+++||+.+|+...|.....+ ..
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 342 (465)
T TIGR00894 263 VWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGI 342 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 9999998887766655556666666654 6777643 36678899999999999999999987665544322111 11
Q ss_pred HH--HHHHHHHHhc-c-CchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHH
Q 007654 438 FV--MAIGHIFLGM-G-WPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIY 513 (594)
Q Consensus 438 ~~--~~~~~ll~~~-~-~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iy 513 (594)
.. ..+..+.... . ......+...+.+...+......-....|..+ ++.|...|+......+|+.+ .|.+.|.+.
T Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~l~~~i-~p~l~g~~~ 420 (465)
T TIGR00894 343 GGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDLAP-RFLGFIKGITGLPGFIGGLI-ASTLAGNIL 420 (465)
T ss_pred HHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhchhhcCh-hHHHHHHHHHHHHHHHHHHH-HHHhhheee
Confidence 11 1111111111 1 22222333344444444444444444556665 69999999999888888884 788888888
Q ss_pred HhhhhcccCcccccccccccccCCCCCCCCCccccCcccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhh
Q 007654 514 DHEAEKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTSMIMSGLCIVAVILSMILVHRTTNVYS 582 (594)
Q Consensus 514 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~~l~~r~r~~~~ 582 (594)
|.+.. +-|+..|.+.++.++++.++.......++..+.
T Consensus 421 ~~~~~-------------------------------~~~~~~f~~~~~~~~i~~i~~~~~~~~~~~~w~ 458 (465)
T TIGR00894 421 SQDSK-------------------------------NVWLIVFLIMAFVNILCVIFYLIFGSAERQDWA 458 (465)
T ss_pred CCCCc-------------------------------hHHHHHHHHHHHHHHHHHHHeeeeecceecCCC
Confidence 75421 149999999999999998888776655555554
No 29
>TIGR00898 2A0119 cation transport protein.
Probab=99.73 E-value=8e-17 Score=178.33 Aligned_cols=384 Identities=15% Similarity=0.158 Sum_probs=227.3
Q ss_pred CcccccccccHHHHhhhCCC---hhhHHHHHHHHhhhhhc-ccchhhhhchhhhHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 007654 30 GIGYLFGSISPVIKSSLNYN---QKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRA 105 (594)
Q Consensus 30 Gt~Y~fS~ys~~Lk~~lg~s---q~~l~~i~~a~~~G~~~-gi~~G~l~D~~gp~~~l~iG~~~~~~Gy~~~~l~~~g~i 105 (594)
+-.|.++.+.+++++++|++ ..+..++.....+|..+ .++.|.+.||+|+|.++.++.+...++..+..+ .
T Consensus 103 ~~~~~~~~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~-----~ 177 (505)
T TIGR00898 103 GWEYSYDTFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAF-----S 177 (505)
T ss_pred CcEecCCcccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHH-----c
Confidence 45577778999999999999 88888888788888765 678999999999999999988877666654422 2
Q ss_pred CChhHHHHHHHHHhhccccchhhhhHHHHHHHhcCC-CCCceehhhHhhhhhhHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 007654 106 PVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPK-SRGPVVGILKGFAGLGGAILTQVYTMIHAPDHANLIFMVAVGP 184 (594)
Q Consensus 106 ~~~s~~~l~~~~~l~g~G~~~~~taal~t~~k~FP~-~RG~~~Gl~~a~~GLSa~i~s~i~~~~f~~~~~~fll~la~~~ 184 (594)
+++|.+.++-++.|.+.+..+........+++|. +||.+.++...++++|..+...+.. +.. + ...++.+...+
T Consensus 178 --~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~-~~~-~-wr~~~~~~~i~ 252 (505)
T TIGR00898 178 --PNYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAY-FIP-D-WRWLQLAVSLP 252 (505)
T ss_pred --ccHHHHHHHHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHH-Hhh-H-HHHHHHHHHHH
Confidence 2577777777788888888888888899999985 5999999987777777655443321 111 1 11111111111
Q ss_pred HHHHHhhheeecccCCCCcCCCCCCCchhHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHhhhcchhhhhh
Q 007654 185 AMVVIALMFIIRPVGGHRQVRPSDSSSFTFIYSVCLLLAAYLMGVMLVEDLVDLNHTVIIIFTVILFVLLFIPIVIPIIL 264 (594)
Q Consensus 185 ~~v~l~~~~~ir~~~~~~~~~~~~~~~f~~~~~~~~~l~~~l~~~~~~~~~~~~s~~~~~~~~~i~~~ll~~~~~~~~~~ 264 (594)
.++.++..+++ |-..
T Consensus 253 ~~~~~~~~~~~-----------------------------------------------------------------~esp 267 (505)
T TIGR00898 253 TFLFFLLSWFV-----------------------------------------------------------------PESP 267 (505)
T ss_pred HHHHHHHHHhc-----------------------------------------------------------------CCCh
Confidence 11111111110 0000
Q ss_pred cccccCCChhhhhhcCCCCCCCCCCCCCcchhhhhcccccCCCCccCCCchhHHHHHHHHHHHHHHhhhhhhhhhhhccC
Q 007654 265 SFFLERTDPAEEALLSKPENMEPGKSNQETDEVILSEVEDEKPKDVDLLPASERRKRIAQLQARLFHAAAEGAVRVKRRR 344 (594)
Q Consensus 265 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (594)
.+...+.+.++. .+... +....+... .+ ++.. . ...+.+. +
T Consensus 268 ~~l~~~~~~~~a------------------~~~l~-~~~~~~~~~---~~-~~~~-~----------~~~~~~~--~--- 308 (505)
T TIGR00898 268 RWLISQGRIEEA------------------LKILQ-RIAKINGKK---LP-AEVL-S----------LSLEKDL--S--- 308 (505)
T ss_pred HHHHHCCCHHHH------------------HHHHH-HHHHHcCCC---CC-HHHH-h----------hhhhhhh--h---
Confidence 000000000000 00000 000000000 00 0000 0 0000000 0
Q ss_pred CCCCCCCCCHHHHhhcHHHHHHHHHHHhhhcchhheecchHHHHHHhCCCcchhHHHHHHHhhhhhcccccchhhhhhhc
Q 007654 345 GPHRGEDFTLTQALIKADFWLIFFSLLLGSGSGLTVIDNLGQMSQSLGYDNTHIFVSMISIWNFLGRVGGGYFSEIIVRD 424 (594)
Q Consensus 345 ~p~~~~d~t~~e~l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~~~g~~~~~~~Vsl~si~n~~GRl~~G~lsD~l~r~ 424 (594)
++ ....+.++++|++++|...+...+................+.++.+. .....+.++....|+++.++++||++||
T Consensus 309 -~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~l~dr~grr 385 (505)
T TIGR00898 309 -SS-KKQYSFLDLFRTPNLRKTTLCLMMLWFTTAFSYYGLVLDLGNLGGNI-YLDLFISGLVELPAKLITLLLIDRLGRR 385 (505)
T ss_pred -hc-cCCCcHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCh-HHHHHHHHHHHHHHHHHHHHHHHHhCCH
Confidence 00 01357789999999998877766554433222222222223334332 2234466788889999999999999885
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHhc-cCc--hhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHH
Q 007654 425 YAYPRPVAMAVAQFVMAIGHIFLGM-GWP--GAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGS 501 (594)
Q Consensus 425 ~~~~r~~~l~~~~~~~~~~~ll~~~-~~~--~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~ 501 (594)
+. +.+..++.+++++++.. ... ........+.+++.++.+.+...+++|.|..++-++-.|+......+|+
T Consensus 386 ~~------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~ 459 (505)
T TIGR00898 386 YT------MAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGS 459 (505)
T ss_pred HH------HHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHH
Confidence 43 23333444444433332 222 3344556667788888899999999999999999999999998888988
Q ss_pred HHHHHHHHHHHHHhhhhcccCcccccccccccccCCCCCCCCCccccCcccHHHHHHHHHHHHHHHHHHHHH
Q 007654 502 LVFSGLIASYIYDHEAEKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTSMIMSGLCIVAVILSMIL 573 (594)
Q Consensus 502 ~~~~~~l~G~iyd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~~l 573 (594)
. ++|.+.+ .+..+ +..+|.+.+++++++.++.+++
T Consensus 460 ~-i~p~i~~--~~~~~----------------------------------~~~~~~~~~~~~~~~~~~~~~l 494 (505)
T TIGR00898 460 I-ISPFLVY--LGEKW----------------------------------LFLPLVLFGGLALLAGILTLFL 494 (505)
T ss_pred H-HHhHHHH--HHHHH----------------------------------HhhHHHHHHHHHHHHHHHHHcC
Confidence 8 5898887 33322 3457777777777776666554
No 30
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.73 E-value=1.3e-15 Score=162.77 Aligned_cols=321 Identities=15% Similarity=0.176 Sum_probs=194.0
Q ss_pred ccccccHHHHhhhCCChhhHHHHHHHHhhhhhc-ccchhhhhchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHH
Q 007654 34 LFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWA 112 (594)
Q Consensus 34 ~fS~ys~~Lk~~lg~sq~~l~~i~~a~~~G~~~-gi~~G~l~D~~gp~~~l~iG~~~~~~Gy~~~~l~~~g~i~~~s~~~ 112 (594)
....+-|++++++|+|.+|...+..+..++..+ .++.|.+.||+|+|.++.++.++..+++.+... . +++|.
T Consensus 24 ~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~--~-----~~~~~ 96 (381)
T PRK03633 24 VLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGL--M-----VGFWS 96 (381)
T ss_pred hHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--h-----ccHHH
Confidence 344567888899999999999987777788754 788999999999999999999988777765432 1 24666
Q ss_pred HHHHHHhhccccchhhhhHHHHHHHhcC-CCCCceehhhHhhhhhhHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHhh
Q 007654 113 MCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIHAPDHANLIFMVAVGPAMVVIAL 191 (594)
Q Consensus 113 l~~~~~l~g~G~~~~~taal~t~~k~FP-~~RG~~~Gl~~a~~GLSa~i~s~i~~~~f~~~~~~fll~la~~~~~v~l~~ 191 (594)
+.+..++.|.+.+...........+..| ++||++.|+...+..+|..+-..+...+.+..
T Consensus 97 l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~------------------- 157 (381)
T PRK03633 97 WLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTEL------------------- 157 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc-------------------
Confidence 6666677777777665554444555664 67999999888877777765544332110000
Q ss_pred heeecccCCCCcCCCCCCCchhHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHhhhcchhhhhhcccccCC
Q 007654 192 MFIIRPVGGHRQVRPSDSSSFTFIYSVCLLLAAYLMGVMLVEDLVDLNHTVIIIFTVILFVLLFIPIVIPIILSFFLERT 271 (594)
Q Consensus 192 ~~~ir~~~~~~~~~~~~~~~f~~~~~~~~~l~~~l~~~~~~~~~~~~s~~~~~~~~~i~~~ll~~~~~~~~~~~~~~~~~ 271 (594)
. ..+.+ ..+.... ...+ + . +.. .
T Consensus 158 ---~--------------~~~~~------------------------------~~~~~~~--~~~~----~-~-~~~-~- 180 (381)
T PRK03633 158 ---M--------------SVLPW------------------------------VTGLVLA--AILP----L-L-FTR-I- 180 (381)
T ss_pred ---c--------------chHHH------------------------------HHHHHHH--HHHH----H-H-Hhc-c-
Confidence 0 00000 0000000 0000 0 0 000 0
Q ss_pred ChhhhhhcCCCCCCCCCCCCCcchhhhhcccccCCCCccCCCchhHHHHHHHHHHHHHHhhhhhhhhhhhccCCCCCCCC
Q 007654 272 DPAEEALLSKPENMEPGKSNQETDEVILSEVEDEKPKDVDLLPASERRKRIAQLQARLFHAAAEGAVRVKRRRGPHRGED 351 (594)
Q Consensus 272 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~d 351 (594)
+ + +++ +++ + .
T Consensus 181 ~---------~-~~~-----------------~~~---------------------------------------~----~ 190 (381)
T PRK03633 181 L---------N-QQA-----------------ENH---------------------------------------D----S 190 (381)
T ss_pred c---------C-CCC-----------------CCC---------------------------------------C----C
Confidence 0 0 000 000 0 0
Q ss_pred CCHHHHhhcHHHHHHHHHHHhhhcchhhee-cchHHHHHHhCCCcch--hHHHHHHHhhhhhcccccchhhhhhhccCCc
Q 007654 352 FTLTQALIKADFWLIFFSLLLGSGSGLTVI-DNLGQMSQSLGYDNTH--IFVSMISIWNFLGRVGGGYFSEIIVRDYAYP 428 (594)
Q Consensus 352 ~t~~e~l~t~~Fwll~~~~~~~~g~Gl~vi-~n~~~i~~~~g~~~~~--~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~ 428 (594)
.+.++.+|++.||+.....+.. +...... +-+....++.|.+... ..+++..+++.+||+..|+++||+++++.
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~-- 267 (381)
T PRK03633 191 TSIWPMLKLRQARLGVNGCIIS-GIVLGSLYGLMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLV-- 267 (381)
T ss_pred CCHHHHHHhcchHHHHHHHHHH-HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHH--
Confidence 1234567888888654432221 2111111 2234455667777543 47888999999999999999999987432
Q ss_pred hhHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHH
Q 007654 429 RPVAMAVAQFVMAIGHIFLGMGWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLI 508 (594)
Q Consensus 429 r~~~l~~~~~~~~~~~ll~~~~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l 508 (594)
+.....+..++.+.+. .....+....+.|++.+..+......+.|....++.+.-++.......+|.. ++|.+
T Consensus 268 ----l~~~~~~~~~~~~~~~--~~~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~-igp~~ 340 (381)
T PRK03633 268 ----LRVQVFVVILGSIAML--SQAAMAPALFILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSL-LGPSF 340 (381)
T ss_pred ----HHHHHHHHHHHHHHHh--hhHHHHHHHHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHH-HHHHH
Confidence 2223333333333222 1123344556667776666666666678888777777777777777888887 59999
Q ss_pred HHHHHHhhh
Q 007654 509 ASYIYDHEA 517 (594)
Q Consensus 509 ~G~iyd~~~ 517 (594)
.|.+.|..+
T Consensus 341 ~G~l~~~~g 349 (381)
T PRK03633 341 TAMLMQNYS 349 (381)
T ss_pred HHHHHHHhC
Confidence 999999764
No 31
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.73 E-value=3.2e-15 Score=164.85 Aligned_cols=404 Identities=14% Similarity=0.141 Sum_probs=222.1
Q ss_pred cchhHHHHHHHHHHHHhcCcc-cccccccHHHHhhhCCChhhHHHHHHHHhhhhhc-ccchhhhhchhhhHHHHHHHHHH
Q 007654 12 FNNRWLVFVAAMWIQSCAGIG-YLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQ 89 (594)
Q Consensus 12 ~~~Rw~~l~a~~~i~l~~Gt~-Y~fS~ys~~Lk~~lg~sq~~l~~i~~a~~~G~~~-gi~~G~l~D~~gp~~~l~iG~~~ 89 (594)
.+++|..+....+..+..+.. +..+...+++++++|+|+.+.+.+.....++..+ +++.|.+.||+|+|.+++++.++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 94 (496)
T PRK03893 15 NRAQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVL 94 (496)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 345666554444444443333 4556677999999999999999976666666644 78999999999999999999888
Q ss_pred HHHHHHHHHHHHhcCCCChhHHHHHHHHHhhccccchhhhhHHHHHHHhcCC-CCCceehhhHhhhhhhHHHHHHHHHHh
Q 007654 90 NFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPK-SRGPVVGILKGFAGLGGAILTQVYTMI 168 (594)
Q Consensus 90 ~~~Gy~~~~l~~~g~i~~~s~~~l~~~~~l~g~G~~~~~taal~t~~k~FP~-~RG~~~Gl~~a~~GLSa~i~s~i~~~~ 168 (594)
..++...+.+. .++|.+.+..++.|.+.+..+.+......++||+ +||.+.|+......+++.+-..+...+
T Consensus 95 ~~~~~~~~~~~-------~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 167 (496)
T PRK03893 95 FSVGTLACGFA-------PGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLV 167 (496)
T ss_pred HHHHHHHHHHH-------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 87777765432 2467767666777777777788888888899985 589999999998888887666666544
Q ss_pred cCCChHHHHHHHHHHHHHHHHhhheeecccCCCCc--CCCCCCCchhHHHHHHHHHHHHHHHHHHhhhccccch-hHHHH
Q 007654 169 HAPDHANLIFMVAVGPAMVVIALMFIIRPVGGHRQ--VRPSDSSSFTFIYSVCLLLAAYLMGVMLVEDLVDLNH-TVIII 245 (594)
Q Consensus 169 f~~~~~~fll~la~~~~~v~l~~~~~ir~~~~~~~--~~~~~~~~f~~~~~~~~~l~~~l~~~~~~~~~~~~s~-~~~~~ 245 (594)
.+.-.....+.++.++.++.++. .+..|...+ ++++++....-.. +......+ .....
T Consensus 168 ~~~~~w~~~f~~~~~~~~~~~~~---~~~~p~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~ 228 (496)
T PRK03893 168 VPVWGWRALFFIGILPIIFALWL---RKNLPEAEDWKEKHAGKAPVRTMV----------------DILYRGEHRIINIL 228 (496)
T ss_pred hccCCHHHHHHHHHHHHHHHHHH---HHhCCCchhhhhhccccccchhHH----------------HHHhcchhHHHHHH
Confidence 43322333334444444333222 222221110 0000000000000 00000000 00000
Q ss_pred HHHHHHHHhhhcchhhhhhcccccCCChhhhhhcCCCCCCCCCCCCCcchhhhhcccccCCCCccCCCchhHHHHHHHHH
Q 007654 246 FTVILFVLLFIPIVIPIILSFFLERTDPAEEALLSKPENMEPGKSNQETDEVILSEVEDEKPKDVDLLPASERRKRIAQL 325 (594)
Q Consensus 246 ~~~i~~~ll~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (594)
........+.. . + .....+ . -... .
T Consensus 229 ~~~~~~~~~~~----~----~-~~~~~~---~--------------------------------------~~~~-~---- 253 (496)
T PRK03893 229 LTLAAAAALWF----C----F-AGNLQN---A--------------------------------------AIVA-V---- 253 (496)
T ss_pred HHHHHHHHHHH----H----H-Hhhhcc---h--------------------------------------hHHH-H----
Confidence 00000000000 0 0 000000 0 0000 0
Q ss_pred HHHHHhhhhhhhhhhhccCCCCCCCCCCHHHHhhcHHHHHHHHHHHhhhcchhheecchHHHHH-HhCCCcch--hHHHH
Q 007654 326 QARLFHAAAEGAVRVKRRRGPHRGEDFTLTQALIKADFWLIFFSLLLGSGSGLTVIDNLGQMSQ-SLGYDNTH--IFVSM 402 (594)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~p~~~~d~t~~e~l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~-~~g~~~~~--~~Vsl 402 (594)
-..+.... -.....+..+ .+.+.++.+.+..++....+..+...+.++.+ ++|++..+ ...+.
T Consensus 254 ~~~~~~~~---~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~ 319 (496)
T PRK03893 254 LGLLCAAI---FISFMVQSSG-----------KRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFF 319 (496)
T ss_pred HHHHHHHH---HHHHHHHhcc-----------cchhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHHHHHH
Confidence 00000000 0000000000 01123444444444444444344455666774 67887654 37889
Q ss_pred HHHhhhhhcccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHh-ccCch--hHHHHHHHHHhhhhhccchhHHHHHH
Q 007654 403 ISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLG-MGWPG--AMYVGTLLIGLGYGAHWAIVPAAASE 479 (594)
Q Consensus 403 ~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~-~~~~~--~l~~~~~liG~~~G~~~~l~p~i~s~ 479 (594)
.+++..+|++..|+++||++|++. . .....+..+..+++. ..... .+.....+.++...+...+.|.++.|
T Consensus 320 ~~~~~~~g~~~~g~l~dr~g~~~~----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (496)
T PRK03893 320 SGFGAAVGCCVGGFLGDWLGTRKA----Y--VCSLLISQLLIIPVFAIGGANVWVLGLLLFFQQMLGQGISGLLPKLIGG 393 (496)
T ss_pred HHHHHHHHHHHHHHHHHHhcchHH----H--HHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHhcccchhhHHHHHh
Confidence 999999999999999999987442 1 222222222222221 22211 22222233333334456889999999
Q ss_pred hhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHHhhh
Q 007654 480 LFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYDHEA 517 (594)
Q Consensus 480 ~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~~ 517 (594)
.+..++.|+.+|+.+....+|+. ++|.+.|.+.|+.+
T Consensus 394 ~~~~~~~g~~~~~~~~~~~~g~~-lgp~l~g~l~~~~g 430 (496)
T PRK03893 394 YFDTEQRAAGLGFTYNVGALGGA-LAPILGALIAQRLD 430 (496)
T ss_pred hCCHHHhhcccchhhhhhhHHHH-HHHHHHHHHhccCC
Confidence 99999999999999888888887 59999999999765
No 32
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.72 E-value=2.2e-15 Score=155.72 Aligned_cols=331 Identities=21% Similarity=0.313 Sum_probs=240.0
Q ss_pred cccccccccHHHHhhhCCChhhHHHHHHHHhhhhhc-ccchhhhhchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCChh
Q 007654 31 IGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLP 109 (594)
Q Consensus 31 t~Y~fS~ys~~Lk~~lg~sq~~l~~i~~a~~~G~~~-gi~~G~l~D~~gp~~~l~iG~~~~~~Gy~~~~l~~~g~i~~~s 109 (594)
..+.++.+.+.+.+++|.|+++.+.+.....++..+ .++.|.+.||+|+|..+.++.+...+++.+..+. .+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~-------~~ 86 (352)
T cd06174 14 DRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFA-------SS 86 (352)
T ss_pred hhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHh-------cc
Confidence 446677888889999999999999987777777755 7899999999999999999999988888776544 24
Q ss_pred HHHHHHHHHhhccccchhhhhHHHHHHHhcCC-CCCceehhhHhhhhhhHHHHHHHHHHhcCCChHHHHHHHHHHHHHHH
Q 007654 110 LWAMCILIFVGNNGETYFNTAALVSCVQNFPK-SRGPVVGILKGFAGLGGAILTQVYTMIHAPDHANLIFMVAVGPAMVV 188 (594)
Q Consensus 110 ~~~l~~~~~l~g~G~~~~~taal~t~~k~FP~-~RG~~~Gl~~a~~GLSa~i~s~i~~~~f~~~~~~fll~la~~~~~v~ 188 (594)
+|.+....++.|.+.+..+........+++|+ +|+++.++......++..+-..+...+.+.......+.
T Consensus 87 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--------- 157 (352)
T cd06174 87 LWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFL--------- 157 (352)
T ss_pred HHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHH---------
Confidence 66667777777888888888888889999986 79999999988888887666544421110000000000
Q ss_pred HhhheeecccCCCCcCCCCCCCchhHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHhhhcchhhhhhcccc
Q 007654 189 IALMFIIRPVGGHRQVRPSDSSSFTFIYSVCLLLAAYLMGVMLVEDLVDLNHTVIIIFTVILFVLLFIPIVIPIILSFFL 268 (594)
Q Consensus 189 l~~~~~ir~~~~~~~~~~~~~~~f~~~~~~~~~l~~~l~~~~~~~~~~~~s~~~~~~~~~i~~~ll~~~~~~~~~~~~~~ 268 (594)
..++..++.... .
T Consensus 158 --------------------------------------------------------~~~~~~~~~~~~-------~---- 170 (352)
T cd06174 158 --------------------------------------------------------ILAILGLLLALL-------L---- 170 (352)
T ss_pred --------------------------------------------------------HHHHHHHHHHHH-------H----
Confidence 000000000000 0
Q ss_pred cCCChhhhhhcCCCCCCCCCCCCCcchhhhhcccccCCCCccCCCchhHHHHHHHHHHHHHHhhhhhhhhhhhccCCCCC
Q 007654 269 ERTDPAEEALLSKPENMEPGKSNQETDEVILSEVEDEKPKDVDLLPASERRKRIAQLQARLFHAAAEGAVRVKRRRGPHR 348 (594)
Q Consensus 269 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 348 (594)
.
T Consensus 171 ------------------------------------------------------------------------~------- 171 (352)
T cd06174 171 ------------------------------------------------------------------------L------- 171 (352)
T ss_pred ------------------------------------------------------------------------H-------
Confidence 0
Q ss_pred CCCCCHHHHhhcHHHHHHHHHHHhhhcchhheecchHHHHHHh-CCCcch--hHHHHHHHhhhhhcccccchhhhhhhcc
Q 007654 349 GEDFTLTQALIKADFWLIFFSLLLGSGSGLTVIDNLGQMSQSL-GYDNTH--IFVSMISIWNFLGRVGGGYFSEIIVRDY 425 (594)
Q Consensus 349 ~~d~t~~e~l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~~~-g~~~~~--~~Vsl~si~n~~GRl~~G~lsD~l~r~~ 425 (594)
.++ +++|.+.+..++....-..+.....++.++. +.++.. ...++..+.+.++++.+|.++||++||+
T Consensus 172 --------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 242 (352)
T cd06174 172 --------FLL-RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRR 242 (352)
T ss_pred --------HHH-HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 000 6677777777766666666666666666665 665543 3678889999999999999999998854
Q ss_pred CCchhHHHHHHHHHHHHHHHHHhc-cCchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHH
Q 007654 426 AYPRPVAMAVAQFVMAIGHIFLGM-GWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVF 504 (594)
Q Consensus 426 ~~~r~~~l~~~~~~~~~~~ll~~~-~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~ 504 (594)
. .+.....+..++++++.. .+...+++...+.|++.+..+...+..+.|.+..++.++.+|+......+|.. +
T Consensus 243 ~-----~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i 316 (352)
T cd06174 243 L-----LLLIGLLLAALGLLLLALAPSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGA-L 316 (352)
T ss_pred H-----HHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHH-H
Confidence 2 223444444555444433 33456778899999999999999999999999999999999999999999988 5
Q ss_pred HHHHHHHHHHhhhhcccCcccccccccccccCCCCCCCCCccccCcccHHHHHHHHHHHHHHHHHHHH
Q 007654 505 SGLIASYIYDHEAEKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTSMIMSGLCIVAVILSMI 572 (594)
Q Consensus 505 ~~~l~G~iyd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~~ 572 (594)
+|.+.|.++|.. .|+..|.+.+.+++++.++..+
T Consensus 317 ~~~i~g~l~~~~----------------------------------~~~~~~~~~~~~~~i~~i~~~~ 350 (352)
T cd06174 317 GPLLAGLLLDTG----------------------------------GYGGVFLILAALALLAALLLLL 350 (352)
T ss_pred HHHHHHHHhccc----------------------------------CcchHHHHHHHHHHHHHHHhee
Confidence 899999999843 3889999999988888776554
No 33
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.72 E-value=4.5e-15 Score=158.88 Aligned_cols=347 Identities=14% Similarity=0.116 Sum_probs=207.2
Q ss_pred cccccccHHHHhhhCCChhhHHHHHHHHhhhhhc-ccchhhhhchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHH
Q 007654 33 YLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLW 111 (594)
Q Consensus 33 Y~fS~ys~~Lk~~lg~sq~~l~~i~~a~~~G~~~-gi~~G~l~D~~gp~~~l~iG~~~~~~Gy~~~~l~~~g~i~~~s~~ 111 (594)
+..+..-|.+++++|+|.+|.+.+..+..++..+ .++.|.+.||+|+|.++.++.+...++..+.. +. +++|
T Consensus 20 ~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~--~~-----~~~~ 92 (382)
T PRK10091 20 FGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFT--LS-----SSYL 92 (382)
T ss_pred HHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHH--Hh-----CcHH
Confidence 3455577899999999999999987777777755 68899999999999999999988777666432 21 2467
Q ss_pred HHHHHHHhhccccchhhhhHHHHHHHhcCC-CCCceehhhHhhhhhhHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHh
Q 007654 112 AMCILIFVGNNGETYFNTAALVSCVQNFPK-SRGPVVGILKGFAGLGGAILTQVYTMIHAPDHANLIFMVAVGPAMVVIA 190 (594)
Q Consensus 112 ~l~~~~~l~g~G~~~~~taal~t~~k~FP~-~RG~~~Gl~~a~~GLSa~i~s~i~~~~f~~~~~~fll~la~~~~~v~l~ 190 (594)
.+.+.-++.|.+.+...........+++|+ +|+.+.|+...+..++..+-..+...+.+.
T Consensus 93 ~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~------------------- 153 (382)
T PRK10091 93 MLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQE------------------- 153 (382)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhh-------------------
Confidence 777777777777776655555566788986 589888887777777765544332211000
Q ss_pred hheeecccCCCCcCCCCCCCchhHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHhhhcchhhhhhcccccC
Q 007654 191 LMFIIRPVGGHRQVRPSDSSSFTFIYSVCLLLAAYLMGVMLVEDLVDLNHTVIIIFTVILFVLLFIPIVIPIILSFFLER 270 (594)
Q Consensus 191 ~~~~ir~~~~~~~~~~~~~~~f~~~~~~~~~l~~~l~~~~~~~~~~~~s~~~~~~~~~i~~~ll~~~~~~~~~~~~~~~~ 270 (594)
.+....+. ..+++.++.+.. . ..+
T Consensus 154 ---------------------------------------------~gwr~~f~-~~~~~~~~~~~~-----~-~~~---- 177 (382)
T PRK10091 154 ---------------------------------------------FSWRYTFL-LIAVFNIAVLAS-----I-YFW---- 177 (382)
T ss_pred ---------------------------------------------ccHHHHHH-HHHHHHHHHHHH-----H-HHh----
Confidence 00000000 000100000000 0 000
Q ss_pred CChhhhhhcCCCCCCCCCCCCCcchhhhhcccccCCCCccCCCchhHHHHHHHHHHHHHHhhhhhhhhhhhccCCCCCCC
Q 007654 271 TDPAEEALLSKPENMEPGKSNQETDEVILSEVEDEKPKDVDLLPASERRKRIAQLQARLFHAAAEGAVRVKRRRGPHRGE 350 (594)
Q Consensus 271 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 350 (594)
++++++ + ++. + . +
T Consensus 178 --------lp~~~~-~------------------~~~---~-------~---------------------~--------- 190 (382)
T PRK10091 178 --------VPDIRD-E------------------AKG---G-------L---------------------R--------- 190 (382)
T ss_pred --------CCCCCc-c------------------ccc---C-------H---------------------H---------
Confidence 000000 0 000 0 0 0
Q ss_pred CCCHHHHhhcHHHHHHHHHHHhhhcchhheecchHHHHHH-hCCCcch--hHHHHHHHhhhhhcccccchhhhhhhccCC
Q 007654 351 DFTLTQALIKADFWLIFFSLLLGSGSGLTVIDNLGQMSQS-LGYDNTH--IFVSMISIWNFLGRVGGGYFSEIIVRDYAY 427 (594)
Q Consensus 351 d~t~~e~l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~~-~g~~~~~--~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~ 427 (594)
...+.+|++++|.++...+++...-....+...+..++ .|.++.. ...++.++++.+||++.|+++||+++++.
T Consensus 191 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~- 267 (382)
T PRK10091 191 --EQFHFLRSPAPWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRI- 267 (382)
T ss_pred --HHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhH-
Confidence 01235678889988777666543333334445555654 6777643 47889999999999999999999977432
Q ss_pred chhHHHHHHHHHHHHHHHHHh-c-cCchhHHHHHHHHHhhhhhccc-hhHHHHHHhhccCchhhhhhHHHhhhhHHHHHH
Q 007654 428 PRPVAMAVAQFVMAIGHIFLG-M-GWPGAMYVGTLLIGLGYGAHWA-IVPAAASELFGLKKFGALYNFLTLANPAGSLVF 504 (594)
Q Consensus 428 ~r~~~l~~~~~~~~~~~ll~~-~-~~~~~l~~~~~liG~~~G~~~~-l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~ 504 (594)
+.....+..++.+++. . .......+...+.++++++... .....+.+.++.++.|...+ .....+|.. +
T Consensus 268 -----~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~-~ 339 (382)
T PRK10091 268 -----AAVTDFIIVLALLMLFFFGGMKTASLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAAGG--QIAFNLGSA-I 339 (382)
T ss_pred -----HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHHHH--HHHHHHHHH-H
Confidence 2333344444443332 2 2222333444455555544332 22345566677666665432 334567777 5
Q ss_pred HHHHHHHHHHhhhhcccCcccccccccccccCCCCCCCCCccccCcccHHHHHHHHHHHHHHHHHHHH
Q 007654 505 SGLIASYIYDHEAEKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTSMIMSGLCIVAVILSMI 572 (594)
Q Consensus 505 ~~~l~G~iyd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~~ 572 (594)
+|.+.|.++|.++ .|+..|.+.+.++++++.....
T Consensus 340 Gp~~~G~l~~~~~---------------------------------~~~~~~~~~~~~~~~~~~~~~~ 374 (382)
T PRK10091 340 GAYCGGMMLTLGL---------------------------------AYNYVALPAALLSFAAMSSLLL 374 (382)
T ss_pred HHHHhHHHHHccc---------------------------------CcchHHHHHHHHHHHHHHHHHH
Confidence 9999999999864 4999999988777665544443
No 34
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.71 E-value=1.4e-15 Score=164.79 Aligned_cols=178 Identities=16% Similarity=0.139 Sum_probs=117.9
Q ss_pred HHHHhhcHHHHHHHHHHHhhhcchhheecchHHHHHHh----CCCcch--hHHHHHHHhhhhhcccccchhhhhhhccCC
Q 007654 354 LTQALIKADFWLIFFSLLLGSGSGLTVIDNLGQMSQSL----GYDNTH--IFVSMISIWNFLGRVGGGYFSEIIVRDYAY 427 (594)
Q Consensus 354 ~~e~l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~~~----g~~~~~--~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~ 427 (594)
.++.+|++.+|.+.+.+++....-.....+......+. +.+... ...++..+.+.++.+.+|+++||++||+..
T Consensus 216 ~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~ 295 (420)
T PRK09528 216 ALALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNAL 295 (420)
T ss_pred HHHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhh
Confidence 35678899998876655444332222333344444332 333222 356777888999999999999999985532
Q ss_pred chhHHHHHHHHHHHHHHHHHh-ccCchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHH-HhhhhHHHHHHH
Q 007654 428 PRPVAMAVAQFVMAIGHIFLG-MGWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFL-TLANPAGSLVFS 505 (594)
Q Consensus 428 ~r~~~l~~~~~~~~~~~ll~~-~~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~-~~a~~~g~~~~~ 505 (594)
....++..++.+++. ..++..+++...+.|+.++......-..+.|.++.|..++.|+.. .....+|.. ++
T Consensus 296 ------~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~-ig 368 (420)
T PRK09528 296 ------LLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAV-FL 368 (420)
T ss_pred ------HHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHH-HH
Confidence 222333343433333 234445666677778877776666667888999999999888763 455667777 58
Q ss_pred HHHHHHHHHhhhhcccCcccccccccccccCCCCCCCCCccccCcccHHHHHHHHHHHHHHHHHHHH
Q 007654 506 GLIASYIYDHEAEKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTSMIMSGLCIVAVILSMI 572 (594)
Q Consensus 506 ~~l~G~iyd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~~ 572 (594)
|.+.|.++|..| |+.+|.+.+++.+++.++.+.
T Consensus 369 ~~~~G~l~~~~G----------------------------------~~~~f~~~~~~~~i~~~~~~~ 401 (420)
T PRK09528 369 STLAGNLYDSIG----------------------------------FQGTYLILGGIVLLFTLISVF 401 (420)
T ss_pred HHHHHHHHHhhC----------------------------------chHHHHHHHHHHHHHHHHHHH
Confidence 999999999764 899999988877666655544
No 35
>PRK10504 putative transporter; Provisional
Probab=99.70 E-value=1.6e-14 Score=158.57 Aligned_cols=397 Identities=9% Similarity=0.057 Sum_probs=221.6
Q ss_pred hHHHHHHHHHHHHhcCcccccccccHHHHhhhCCChhhHHHHHHHHhhhh-hcccchhhhhchhhhHHHHHHHHHHHHHH
Q 007654 15 RWLVFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGD-SVGFLAGSLCEVLPIWGALLVGALQNFIG 93 (594)
Q Consensus 15 Rw~~l~a~~~i~l~~Gt~Y~fS~ys~~Lk~~lg~sq~~l~~i~~a~~~G~-~~gi~~G~l~D~~gp~~~l~iG~~~~~~G 93 (594)
||...+.+....+..-..+.++.+-|.+.+++|+|+.+..++.....++. ...++.|.+.||+|+|.++.++.+...++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~ 88 (471)
T PRK10504 9 RWQLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLG 88 (471)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHH
Confidence 44433333333333344456677888999999999999988766666665 44778999999999999988887777666
Q ss_pred HHHHHHHHhcCCCChhHHHHHHHHHhhccccchhhhhHHHHHHHhcCC-CCCceehhhHhhhhhhHHHHHHHHHHhcCCC
Q 007654 94 YGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPK-SRGPVVGILKGFAGLGGAILTQVYTMIHAPD 172 (594)
Q Consensus 94 y~~~~l~~~g~i~~~s~~~l~~~~~l~g~G~~~~~taal~t~~k~FP~-~RG~~~Gl~~a~~GLSa~i~s~i~~~~f~~~ 172 (594)
+.+.. + .+ +++.+.+..++.|.|.+...........+++|+ +||++.|+......++..+-..+...+.+..
T Consensus 89 ~~~~~--~---~~--~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~ 161 (471)
T PRK10504 89 SLFCA--L---SG--TLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYA 161 (471)
T ss_pred HHHHH--H---hC--CHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhc
Confidence 66432 2 12 456666666777777777777777777899985 5899999888777777655544443332211
Q ss_pred hHHHHHHHHHHHHHHHHhhheeecccCCCCcCCCCCCCchhHHHH--HHHHHHHHHHHHHHhhhc-cccchhHHHHHHHH
Q 007654 173 HANLIFMVAVGPAMVVIALMFIIRPVGGHRQVRPSDSSSFTFIYS--VCLLLAAYLMGVMLVEDL-VDLNHTVIIIFTVI 249 (594)
Q Consensus 173 ~~~fll~la~~~~~v~l~~~~~ir~~~~~~~~~~~~~~~f~~~~~--~~~~l~~~l~~~~~~~~~-~~~s~~~~~~~~~i 249 (594)
.-...+.+......+..+.... ..|..+. +++++..... .++.+.....+. .++. .+..... .....
T Consensus 162 gw~~~f~~~~~~~~l~~~~~~~--~~~~~~~----~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~ 231 (471)
T PRK10504 162 SWHWIFLINIPVGIIGAIATLM--LMPNYTM----QTRRFDLSGFLLLAVGMATLTLAL--DGSKGLGLSPLA--IAGLV 231 (471)
T ss_pred cHHHHHHHHHHHHHHHHHHHHH--hCCCccc----cCCCCChHHHHHHHHHHHHHHHHH--hcCCcCCcchHH--HHHHH
Confidence 1122222211111122222211 1121111 1111111000 000000000000 0000 0000000 00000
Q ss_pred HHHHhhhcchhhhhhcccccCCChhhhhhcCCCCCCCCCCCCCcchhhhhcccccCCCCccCCCchhHHHHHHHHHHHHH
Q 007654 250 LFVLLFIPIVIPIILSFFLERTDPAEEALLSKPENMEPGKSNQETDEVILSEVEDEKPKDVDLLPASERRKRIAQLQARL 329 (594)
Q Consensus 250 ~~~ll~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (594)
...++.. . . +.
T Consensus 232 ~~~~~~~----~--~-~~-------------------------------------------------------------- 242 (471)
T PRK10504 232 AVGVVAL----L--L-YL-------------------------------------------------------------- 242 (471)
T ss_pred HHHHHHH----H--H-HH--------------------------------------------------------------
Confidence 0000000 0 0 00
Q ss_pred HhhhhhhhhhhhccCCCCCCCCCCHHHHhhcHHHHHHHHHHHhhhcchhheecchHHHH-HH-hCCCcchh--HHHHHHH
Q 007654 330 FHAAAEGAVRVKRRRGPHRGEDFTLTQALIKADFWLIFFSLLLGSGSGLTVIDNLGQMS-QS-LGYDNTHI--FVSMISI 405 (594)
Q Consensus 330 ~~~~~~~~~~~~~~~~p~~~~d~t~~e~l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~-~~-~g~~~~~~--~Vsl~si 405 (594)
.+.++. + +..-..+.+|+++|++.....++.... .....+..+.. +. .|.++... ......+
T Consensus 243 --------~~~~~~--~---~~~~~~~l~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~ 308 (471)
T PRK10504 243 --------LHARNN--N---RALFSLKLFRTRTFSLGLAGSFAGRIG-SGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVL 308 (471)
T ss_pred --------HHHhcC--C---CCccCHHHhcccchHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 000000 0 011112578999999987766665433 44444445543 43 57665433 5566777
Q ss_pred hhhhhcccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHhc-c--C-chhHHHHHHHHHhhhhhccchhHHHHHHhh
Q 007654 406 WNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLGM-G--W-PGAMYVGTLLIGLGYGAHWAIVPAAASELF 481 (594)
Q Consensus 406 ~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~~-~--~-~~~l~~~~~liG~~~G~~~~l~p~i~s~~F 481 (594)
....+++++|.++||++||+.. .....+..++.+++.. . . ...+.+...+.|++.|..++....++.+.+
T Consensus 309 ~~~~~~~~~~~l~~r~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 382 (471)
T PRK10504 309 GSMGMKRIVVQVVNRFGYRRVL------VATTLGLALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDL 382 (471)
T ss_pred HHHHHHHHHHHHHHHcCchHHH------HHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 7888999999999999774421 2223333333322222 1 1 112344566778889988999999999999
Q ss_pred ccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHHhhhh
Q 007654 482 GLKKFGALYNFLTLANPAGSLVFSGLIASYIYDHEAE 518 (594)
Q Consensus 482 G~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~~~ 518 (594)
..++.|..+++.....-+|.. +++.+.|.+.|..+.
T Consensus 383 ~~~~~g~~~~~~~~~~~~g~~-ig~~i~g~ll~~~g~ 418 (471)
T PRK10504 383 PDNLASSGNSLLSMIMQLSMS-IGVTIAGLLLGLFGQ 418 (471)
T ss_pred CHHhccchHHHHHHHHHHHHH-HHHHHHHHHHHHhhh
Confidence 999999999999988888887 589999999998764
No 36
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.70 E-value=3.7e-15 Score=159.56 Aligned_cols=182 Identities=14% Similarity=0.118 Sum_probs=121.9
Q ss_pred HHhhcHHHHHHHHHHHhhhcchhh-eecchHHHHHHhCCCcc------hhHHHHHHHhhhhhcccccchhhhhhhccCCc
Q 007654 356 QALIKADFWLIFFSLLLGSGSGLT-VIDNLGQMSQSLGYDNT------HIFVSMISIWNFLGRVGGGYFSEIIVRDYAYP 428 (594)
Q Consensus 356 e~l~t~~Fwll~~~~~~~~g~Gl~-vi~n~~~i~~~~g~~~~------~~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~ 428 (594)
+.++++++|.......+....+.. +........++.+.+.. ....++.++.+.++++.+|+++||++|++..
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~- 291 (408)
T PRK09874 213 TSLKNPKLVLSLFVTTLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKIL- 291 (408)
T ss_pred HhCcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhH-
Confidence 445677776644333322222221 22223333344433221 1244567788999999999999999875432
Q ss_pred hhHHHHHHHHHHHHHHHHHhc-cCchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHH
Q 007654 429 RPVAMAVAQFVMAIGHIFLGM-GWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGL 507 (594)
Q Consensus 429 r~~~l~~~~~~~~~~~ll~~~-~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~ 507 (594)
.....+..++.+.+.. .++..+++..++.|++.|..+......+.+....++.|+.+++......+|.. ++|.
T Consensus 292 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~-~gp~ 365 (408)
T PRK09874 292 -----ITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNV-TGPL 365 (408)
T ss_pred -----HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHH-hhHH
Confidence 2222333333333322 33445666778889999999888888998998888999999999888888887 5999
Q ss_pred HHHHHHHhhhhcccCcccccccccccccCCCCCCCCCccccCcccHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 007654 508 IASYIYDHEAEKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTSMIMSGLCIVAVILSMILVHRTT 578 (594)
Q Consensus 508 l~G~iyd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~~l~~r~r 578 (594)
+.|.+.|..+ |+..|.+.+++.+++.++.....+|++
T Consensus 366 ~~G~l~~~~g----------------------------------~~~~f~~~~~~~l~~~~~~~~~~~~~~ 402 (408)
T PRK09874 366 MGAAISANYG----------------------------------FRAVFLVTAGVVLFNAVYSWNSLRRRR 402 (408)
T ss_pred HHHHHHhhcc----------------------------------hhHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999988654 899999999999998888876554444
No 37
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.69 E-value=3.9e-15 Score=172.01 Aligned_cols=146 Identities=17% Similarity=0.149 Sum_probs=110.5
Q ss_pred chhHHHHHHHHHHHHhcCc-ccccccccHHHHhhhCCChhhHHHHHHHHhhhhhc-ccchhhhhchhhhHHHHHHHHHHH
Q 007654 13 NNRWLVFVAAMWIQSCAGI-GYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQN 90 (594)
Q Consensus 13 ~~Rw~~l~a~~~i~l~~Gt-~Y~fS~ys~~Lk~~lg~sq~~l~~i~~a~~~G~~~-gi~~G~l~D~~gp~~~l~iG~~~~ 90 (594)
+.+|..++...+..+..|. ....+..-|++++.+|++..+.+++..+..+|..+ .+++|.+.||+|+|.+++++.++.
T Consensus 163 ~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~ 242 (742)
T TIGR01299 163 RFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVN 242 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 3456666555555555543 23456677889999999999999987778888755 678999999999999999988877
Q ss_pred HHHHHHHHHHHhcCCCChhHHHHHHHHHhhccccchhhhhHHHHHHHhcC-CCCCceehhhHhhhhhhHHHHHHHH
Q 007654 91 FIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVY 165 (594)
Q Consensus 91 ~~Gy~~~~l~~~g~i~~~s~~~l~~~~~l~g~G~~~~~taal~t~~k~FP-~~RG~~~Gl~~a~~GLSa~i~s~i~ 165 (594)
.++..+..++ +++|.+.++-++.|+|.+.....+.....+++| ++||.+.++...+..+|+.+-..+.
T Consensus 243 ~i~~ll~afa-------~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la 311 (742)
T TIGR01299 243 GFFAFFSSFV-------QGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMA 311 (742)
T ss_pred HHHHHHHHHH-------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666544322 246666777777788888777888888889998 4699999999999888886665444
No 38
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.69 E-value=4.1e-15 Score=161.93 Aligned_cols=191 Identities=11% Similarity=0.101 Sum_probs=138.9
Q ss_pred HHHHhhcHHHHHHHHHHHhhhcchhheecchHHHHHHhCCCc----------chhHHHHHHHhhhhhcccccchhhhhhh
Q 007654 354 LTQALIKADFWLIFFSLLLGSGSGLTVIDNLGQMSQSLGYDN----------THIFVSMISIWNFLGRVGGGYFSEIIVR 423 (594)
Q Consensus 354 ~~e~l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~~~g~~~----------~~~~Vsl~si~n~~GRl~~G~lsD~l~r 423 (594)
.++.+|+++||.+.+..++....-..+..+.....++.|.++ ....+++..+....+++..|.++||++|
T Consensus 201 ~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~ 280 (418)
T TIGR00889 201 AFILFKNKRMAIFFFFSMLLGAPLQITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGI 280 (418)
T ss_pred HHHHhcCCCeeeHHHHHHHHHhHHHHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 456889999999888877754433333344445556666443 1347788899999999999999999988
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHhc--cCc---hhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHH-hhh
Q 007654 424 DYAYPRPVAMAVAQFVMAIGHIFLGM--GWP---GAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLT-LAN 497 (594)
Q Consensus 424 ~~~~~r~~~l~~~~~~~~~~~ll~~~--~~~---~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~-~a~ 497 (594)
|+. +.+..++..++..++.. ... ..+++..++.|+++|......+.+++|.++.++.|+.+|+.. ...
T Consensus 281 r~~------l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~ 354 (418)
T TIGR00889 281 KKV------MLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCN 354 (418)
T ss_pred HHH------HHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
Confidence 543 23333444444333322 111 245667888999999988899999999999999999999996 567
Q ss_pred hHHHHHHHHHHHHHHHHhhhhcccCcccccccccccccCCCCCCCCCccccCcccHHHHHHHHHHHHHHHHHHHHHHhhh
Q 007654 498 PAGSLVFSGLIASYIYDHEAEKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTSMIMSGLCIVAVILSMILVHRT 577 (594)
Q Consensus 498 ~~g~~~~~~~l~G~iyd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~~l~~r~ 577 (594)
.+|+. ++|.+.|.++|+.+.... ..|+..|.+.++++++++++.....++.
T Consensus 355 ~lg~~-iGp~l~G~l~~~~g~~~~----------------------------~~~~~~f~~~~~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 355 GFGSL-LGYILSGVMVEKMFAYGT----------------------------FDWQTMWLFFAGYIAILAVLFMIFFKYS 405 (418)
T ss_pred hhHHH-HHHHHHHHHHHHhccccC----------------------------CchHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 88887 599999999998763210 1499999999999998888888777655
Q ss_pred hh
Q 007654 578 TN 579 (594)
Q Consensus 578 r~ 579 (594)
++
T Consensus 406 ~~ 407 (418)
T TIGR00889 406 HN 407 (418)
T ss_pred cc
Confidence 43
No 39
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.69 E-value=1.8e-14 Score=155.44 Aligned_cols=345 Identities=8% Similarity=0.027 Sum_probs=211.6
Q ss_pred hhHHHHHHHHHHHHhcCc-ccccccccHHHHhhhCCChhhHHHHHHHHhhhh-hcccchhhhhchhhhHHHHHHHHHHHH
Q 007654 14 NRWLVFVAAMWIQSCAGI-GYLFGSISPVIKSSLNYNQKQIARLGVAKDLGD-SVGFLAGSLCEVLPIWGALLVGALQNF 91 (594)
Q Consensus 14 ~Rw~~l~a~~~i~l~~Gt-~Y~fS~ys~~Lk~~lg~sq~~l~~i~~a~~~G~-~~gi~~G~l~D~~gp~~~l~iG~~~~~ 91 (594)
+-|..+...+....+.++ .|.-.-.-|++++++|+|.+|...+..+..++. ...++.|.+.||+|+|.++.++.++..
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~ 96 (394)
T PRK10213 17 PNWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLT 96 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHH
Confidence 346655555555444444 344444678899999999999999644444444 557899999999999999999999887
Q ss_pred HHHHHHHHHHhcCCCChhHHHHHHHHHhhccccchhhhhHHHHHHHhcC-CCCCceehhhHhhhhhhHHHHHHHHHHhcC
Q 007654 92 IGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIHA 170 (594)
Q Consensus 92 ~Gy~~~~l~~~g~i~~~s~~~l~~~~~l~g~G~~~~~taal~t~~k~FP-~~RG~~~Gl~~a~~GLSa~i~s~i~~~~f~ 170 (594)
++..+... . .++|.+.+.-++.|.+.+..+..+.....++|| ++||.+.|+.-+..+++..+-..+...+.+
T Consensus 97 ~~~~~~~~--~-----~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~ 169 (394)
T PRK10213 97 LSCLLVSF--A-----NSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGE 169 (394)
T ss_pred HHHHHHHH--H-----ChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 77665322 1 257777777777788888777777778889997 568999999998888887655433321100
Q ss_pred CChHHHHHHHHHHHHHHHHhhheeecccCCCCcCCCCCCCchhHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHH
Q 007654 171 PDHANLIFMVAVGPAMVVIALMFIIRPVGGHRQVRPSDSSSFTFIYSVCLLLAAYLMGVMLVEDLVDLNHTVIIIFTVIL 250 (594)
Q Consensus 171 ~~~~~fll~la~~~~~v~l~~~~~ir~~~~~~~~~~~~~~~f~~~~~~~~~l~~~l~~~~~~~~~~~~s~~~~~~~~~i~ 250 (594)
. .+....+. ..+++.
T Consensus 170 ~----------------------------------------------------------------~gw~~~f~-~~~~l~ 184 (394)
T PRK10213 170 L----------------------------------------------------------------IGWRNVFN-AAAVMG 184 (394)
T ss_pred h----------------------------------------------------------------cCHHHHHH-HHHHHH
Confidence 0 00000000 000000
Q ss_pred HHHhhhcchhhhhhcccccCCChhhhhhcCCCCCCCCCCCCCcchhhhhcccccCCCCccCCCchhHHHHHHHHHHHHHH
Q 007654 251 FVLLFIPIVIPIILSFFLERTDPAEEALLSKPENMEPGKSNQETDEVILSEVEDEKPKDVDLLPASERRKRIAQLQARLF 330 (594)
Q Consensus 251 ~~ll~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (594)
+ ++.. .. . .. .++++ ++ ++
T Consensus 185 ~-~~~l----~~---~-~~---------~p~~~-~~------------------~~------------------------ 203 (394)
T PRK10213 185 V-LCIF----WI---I-KS---------LPSLP-GE------------------PS------------------------ 203 (394)
T ss_pred H-HHHH----HH---H-HH---------CCCCC-cc------------------cc------------------------
Confidence 0 0000 00 0 00 00000 00 00
Q ss_pred hhhhhhhhhhhccCCCCCCCCCCHHHHhhcHHHHHHHHHHHhhhcchhheecchHHHH-HHhCCCcch--hHHHHHHHhh
Q 007654 331 HAAAEGAVRVKRRRGPHRGEDFTLTQALIKADFWLIFFSLLLGSGSGLTVIDNLGQMS-QSLGYDNTH--IFVSMISIWN 407 (594)
Q Consensus 331 ~~~~~~~~~~~~~~~p~~~~d~t~~e~l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~-~~~g~~~~~--~~Vsl~si~n 407 (594)
+ ...+.++.+|++.+|.+.+..++.............|.. ++.|.+... ...+..++++
T Consensus 204 ---------------~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~ 265 (394)
T PRK10213 204 ---------------H---QKQNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIAS 265 (394)
T ss_pred ---------------c---chhHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHH
Confidence 0 000124678899999887765554443333444555655 456877653 3567788889
Q ss_pred hhhcccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHH-hccCchhHHHHHHHHHhhhhhccchhHHHHHHhhccCch
Q 007654 408 FLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFL-GMGWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKF 486 (594)
Q Consensus 408 ~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~-~~~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~ 486 (594)
.+|++++|.+.||..| ...+....+......++. ....+..+....++.|++++......+..+.+.. .++.
T Consensus 266 iig~~~~~~l~~r~~~------~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~-~~~~ 338 (394)
T PRK10213 266 FVGTSLSSFILKRSVK------LALAGAPLVLAVSALVLTLWGSDKIVATGVAIIWGLTFALVPVGWSTWITRSL-ADQA 338 (394)
T ss_pred HHHHHHHHHHHhccch------hHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHC-cccH
Confidence 9999888888887322 112222222222222222 2233445666788889999999999998777776 3667
Q ss_pred hhhhhHHHhhhhHHHHHHHHHHHHHHHHhhh
Q 007654 487 GALYNFLTLANPAGSLVFSGLIASYIYDHEA 517 (594)
Q Consensus 487 g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~~ 517 (594)
++..+..+....+|.. +|+.++|.++|+.+
T Consensus 339 ~~~~~~~~~~~~lg~~-~G~~l~G~l~~~~g 368 (394)
T PRK10213 339 EKAGSIQVAVIQLANT-CGAAIGGYALDNIG 368 (394)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHhccC
Confidence 7777777777777776 59999999999764
No 40
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.69 E-value=6.7e-15 Score=159.95 Aligned_cols=359 Identities=11% Similarity=0.060 Sum_probs=217.6
Q ss_pred HhcCccccc-ccccHHHHhhhCCChhhHHHHHHHHhhhhhc-ccchhhhhchhhhHHHHHHHHHHHHHHHHHHHHHHhcC
Q 007654 27 SCAGIGYLF-GSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGR 104 (594)
Q Consensus 27 l~~Gt~Y~f-S~ys~~Lk~~lg~sq~~l~~i~~a~~~G~~~-gi~~G~l~D~~gp~~~l~iG~~~~~~Gy~~~~l~~~g~ 104 (594)
..-|..+.. +..-|++++++|+|..|...+..+..+|..+ +++.|.+.||+|+|.++.+|.++..+|..+++.+ ..
T Consensus 13 ~~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~--~~ 90 (410)
T TIGR00885 13 ALWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPA--AE 90 (410)
T ss_pred HHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH--Hh
Confidence 333444444 3667999999999999999987777777754 8899999999999999999999988888765322 11
Q ss_pred CCChhHHHHHHHHHhhccccchhhhhHHHHHHHhcCC-CCCceehhhHhhhhhhHHHHHHHHHHhcCCC----hHHHHHH
Q 007654 105 APVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPK-SRGPVVGILKGFAGLGGAILTQVYTMIHAPD----HANLIFM 179 (594)
Q Consensus 105 i~~~s~~~l~~~~~l~g~G~~~~~taal~t~~k~FP~-~RG~~~Gl~~a~~GLSa~i~s~i~~~~f~~~----~~~fll~ 179 (594)
. .++|.+....++.|.|.+..+++.-....+..|+ +|+...++.-+++++|+.+-..+...++..+ ....+-.
T Consensus 91 ~--~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~ 168 (410)
T TIGR00885 91 I--MNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDK 168 (410)
T ss_pred h--ccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhh
Confidence 1 2577777777888889999888777777778874 5899999999999998877665554332111 0000000
Q ss_pred HHHHHHHHHHhhheeecccCCCCcC-CCCCCCchhHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHhhhcc
Q 007654 180 VAVGPAMVVIALMFIIRPVGGHRQV-RPSDSSSFTFIYSVCLLLAAYLMGVMLVEDLVDLNHTVIIIFTVILFVLLFIPI 258 (594)
Q Consensus 180 la~~~~~v~l~~~~~ir~~~~~~~~-~~~~~~~f~~~~~~~~~l~~~l~~~~~~~~~~~~s~~~~~~~~~i~~~ll~~~~ 258 (594)
. .+...+. ...|....... |+... ...++..+ +..
T Consensus 169 ~-----------------~~~~~~~~~~~~~~~w~~~---------fl~~a---------------~~~~~~~~-~~~-- 204 (410)
T TIGR00885 169 L-----------------SPEELSAIKHSDLASVQTP---------YMIIG---------------AVVLAVAL-LIM-- 204 (410)
T ss_pred c-----------------CHHHHHHHHHHHHHHHHHH---------HHHHH---------------HHHHHHHH-HHH--
Confidence 0 0000000 00000011111 11110 00000000 000
Q ss_pred hhhhhhcccccCCChhhhhhcCCCCCCCCCCCCCcchhhhhcccccCCCCccCCCchhHHHHHHHHHHHHHHhhhhhhhh
Q 007654 259 VIPIILSFFLERTDPAEEALLSKPENMEPGKSNQETDEVILSEVEDEKPKDVDLLPASERRKRIAQLQARLFHAAAEGAV 338 (594)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (594)
+ .+.++ . +++ ++++.
T Consensus 205 -------~-~~~p~---------~--~~~---------------~~~~~------------------------------- 219 (410)
T TIGR00885 205 -------L-TKMPA---------L--NHS---------------DAKQI------------------------------- 219 (410)
T ss_pred -------H-hcCCC---------C--Ccc---------------ccccc-------------------------------
Confidence 0 00000 0 000 00000
Q ss_pred hhhccCCCCCCCCCCHHHHhhcHHHHHHHHHHHhhhcchhheecchHHHHHHhCCCc--c--hhHHHHHHHhhhhhcccc
Q 007654 339 RVKRRRGPHRGEDFTLTQALIKADFWLIFFSLLLGSGSGLTVIDNLGQMSQSLGYDN--T--HIFVSMISIWNFLGRVGG 414 (594)
Q Consensus 339 ~~~~~~~p~~~~d~t~~e~l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~~~g~~~--~--~~~Vsl~si~n~~GRl~~ 414 (594)
+ ...+.++.+|++++|+..+..++-.+.-..+.+++.+..++.+.+. . ....+.+-..-.+||+++
T Consensus 220 -------~---~~~~~~~~~~~~~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~ 289 (410)
T TIGR00885 220 -------S---FSASLSRLARIRHYREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIG 289 (410)
T ss_pred -------c---chhhHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0012346788999999888888877776667777888877654332 2 225666667789999999
Q ss_pred cchhhhhhhccCCchhHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHH
Q 007654 415 GYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLGMGWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLT 494 (594)
Q Consensus 415 G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~~~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~ 494 (594)
|++.||+++++. +.+..++.++.+++....+........+++|+..+..|...-++..+.+|.+.-..--++++
T Consensus 290 ~~l~~r~~~~~~------l~i~~~~~~~~~ll~~~~~~~~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~ 363 (410)
T TIGR00885 290 TWLISYLAAHKV------LMAYAIIGMALCLGSIFAGGHVGLYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVM 363 (410)
T ss_pred HHHHHHcCHHHH------HHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHH
Confidence 999999866332 23333334444433333333234567788899999999999999999999444222333333
Q ss_pred hhhhHHHHHHHHHHHHHHHHhhh
Q 007654 495 LANPAGSLVFSGLIASYIYDHEA 517 (594)
Q Consensus 495 ~a~~~g~~~~~~~l~G~iyd~~~ 517 (594)
+ .+|+.+ .|.+.|.+.|+.+
T Consensus 364 -~-~~Gga~-~p~l~G~~~d~~~ 383 (410)
T TIGR00885 364 -A-IIGGGI-VPPLQGFIIDMKE 383 (410)
T ss_pred -H-Hhccch-HHHHHHHHHHHhc
Confidence 3 377774 7999999999775
No 41
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.68 E-value=1.3e-14 Score=156.82 Aligned_cols=385 Identities=12% Similarity=0.125 Sum_probs=228.3
Q ss_pred cchhHHHHHHHHHHHHhcCcccccccccHHHHhhhCCChhhHHHHHHHHhhhh-hcccchhhhhchhhhHHHHHHHHHHH
Q 007654 12 FNNRWLVFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGD-SVGFLAGSLCEVLPIWGALLVGALQN 90 (594)
Q Consensus 12 ~~~Rw~~l~a~~~i~l~~Gt~Y~fS~ys~~Lk~~lg~sq~~l~~i~~a~~~G~-~~gi~~G~l~D~~gp~~~l~iG~~~~ 90 (594)
+..+|+.+....++.++.+.. |++.+..+++++|+|..++..+.....+.. ..+++.|.+.||+|+|.++.++.+..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~ 86 (400)
T PRK11646 9 NLGKYFLLIDNMLVVLGFFVV--FPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMR 86 (400)
T ss_pred cccHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHH
Confidence 345688888888887777554 677777899999999999999755544444 55789999999999999999999988
Q ss_pred HHHHHHHHHHHhcCCCChhHHHHHHHHHhhccccchhhhhHHHHHHHhcC-CCCCceehhhHhhhhhhHHHHHHHHHHhc
Q 007654 91 FIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIH 169 (594)
Q Consensus 91 ~~Gy~~~~l~~~g~i~~~s~~~l~~~~~l~g~G~~~~~taal~t~~k~FP-~~RG~~~Gl~~a~~GLSa~i~s~i~~~~f 169 (594)
.++..++.. . +++|.+....++.|.+.+....+......+++| ++||++.|+......++..+-..+...+.
T Consensus 87 ~~~~~~~~~--~-----~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~ 159 (400)
T PRK11646 87 AAGFATMAI--A-----HEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL 159 (400)
T ss_pred HHHHHHHHH--h-----ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777766432 1 246776766666676777666666666778886 57999999988877777655544432111
Q ss_pred CCChHHHHHHHHHHHHHHHHhhheeecccCCCCcCCCCCCCchhHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHH
Q 007654 170 APDHANLIFMVAVGPAMVVIALMFIIRPVGGHRQVRPSDSSSFTFIYSVCLLLAAYLMGVMLVEDLVDLNHTVIIIFTVI 249 (594)
Q Consensus 170 ~~~~~~fll~la~~~~~v~l~~~~~ir~~~~~~~~~~~~~~~f~~~~~~~~~l~~~l~~~~~~~~~~~~s~~~~~~~~~i 249 (594)
... +.. .+.... ....+
T Consensus 160 ---------~~g------------------------------~~~---------~f~~~~---------------~~~~~ 176 (400)
T PRK11646 160 ---------QYD------------------------------FRL---------VCATGA---------------VLFVL 176 (400)
T ss_pred ---------Hhh------------------------------HHH---------HHHHHH---------------HHHHH
Confidence 000 000 000000 00000
Q ss_pred HHHHhhhcchhhhhhcccccCCChhhhhhcCCCCCCCCCCCCCcchhhhhcccccCCCCccCCCchhHHHHHHHHHHHHH
Q 007654 250 LFVLLFIPIVIPIILSFFLERTDPAEEALLSKPENMEPGKSNQETDEVILSEVEDEKPKDVDLLPASERRKRIAQLQARL 329 (594)
Q Consensus 250 ~~~ll~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (594)
..++... +. + + + .++ ++. +
T Consensus 177 ~~i~~~~---------~~--~-~---------~--~~~-----------------~~~-----------~---------- 195 (400)
T PRK11646 177 AAAFNAW---------LL--P-A---------Y--KLS-----------------TVR-----------T---------- 195 (400)
T ss_pred HHHHHHH---------hC--C-c---------c--ccc-----------------ccc-----------h----------
Confidence 0000000 00 0 0 0 000 000 0
Q ss_pred HhhhhhhhhhhhccCCCCCCCCCCHHHHhhcHHHHHHHHHHHhhhcchhheecchHHHHHHhCCCcchh--HHHHHHHhh
Q 007654 330 FHAAAEGAVRVKRRRGPHRGEDFTLTQALIKADFWLIFFSLLLGSGSGLTVIDNLGQMSQSLGYDNTHI--FVSMISIWN 407 (594)
Q Consensus 330 ~~~~~~~~~~~~~~~~p~~~~d~t~~e~l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~~~g~~~~~~--~Vsl~si~n 407 (594)
+ ...++++.+++++||.+.+.++........+........++.+.++... ..++.++..
T Consensus 196 ----------------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~l~~~~~~~~ 256 (400)
T PRK11646 196 ----------------P---VREGMTRVLRDKRFVTYVLTLTGYYMLAVQVMLMLPIMVNDIAGSPSAVKWMYAIEACLS 256 (400)
T ss_pred ----------------h---hHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHhhhhhHHhhcCCchHHHHHHHHHHHHH
Confidence 0 0012456788888887655544332222222233344456655544322 334444444
Q ss_pred hhhcccccchhhh-hhhccCCchhHHHHHHHHHHHHHHHHHhc-cCchhHHHHHHHHHhhhhhccchhHHHHHHhhccCc
Q 007654 408 FLGRVGGGYFSEI-IVRDYAYPRPVAMAVAQFVMAIGHIFLGM-GWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKK 485 (594)
Q Consensus 408 ~~GRl~~G~lsD~-l~r~~~~~r~~~l~~~~~~~~~~~ll~~~-~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~ 485 (594)
..+....+...|+ ... .+ . +.....+..++.+++.. .+...+.+...+.+++++......+.++.|....++
T Consensus 257 ~~~~~~~~~~~~~r~~~----~~-~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~ 330 (400)
T PRK11646 257 LTLLYPIARWSEKRFRL----EH-R-LMAGLLIMSLSMFPIGMVSNLQQLFTLICLFYIGSIIAEPARETLSASLADARA 330 (400)
T ss_pred HHHHHHHHHHHHHhcch----hH-H-HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCccc
Confidence 4333333444443 321 11 1 22333344444443332 233345555677788888888888999999999999
Q ss_pred hhhhhhHHHhhhhHHHHHHHHHHHHHHHHhhhhcccCcccccccccccccCCCCCCCCCccccCcccHHHHHHHHHHHHH
Q 007654 486 FGALYNFLTLANPAGSLVFSGLIASYIYDHEAEKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTSMIMSGLCIV 565 (594)
Q Consensus 486 ~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~ 565 (594)
.|+.+|+......+|.. ++|.++|.++|+.+.. .-+..+|.+...++++
T Consensus 331 ~g~~~g~~~~~~~~g~~-ig~~l~G~l~~~~~~~------------------------------~~~~~~~~~~~~~~~~ 379 (400)
T PRK11646 331 RGSYMGFSRLGLALGGA-IGYIGGGWLFDLGKAL------------------------------NQPELPWMMLGIIGLI 379 (400)
T ss_pred chhhhhHHHHHHHHHHH-hcccchHHHHHHHhhc------------------------------CCcchHHHHHHHHHHH
Confidence 99999999988888887 5999999999987521 0246677776666666
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q 007654 566 AVILSMILVHRTTNVYSHLYG 586 (594)
Q Consensus 566 a~~ls~~l~~r~r~~~~~~~~ 586 (594)
+.+. +....|++|.-|+..|
T Consensus 380 ~~~~-~~~~~~~~~~~~~~~~ 399 (400)
T PRK11646 380 TLLA-LYWQFSQKRIARRMLE 399 (400)
T ss_pred HHHH-HHHHHhhchHHHhhhc
Confidence 6444 4456666666665544
No 42
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.67 E-value=6.1e-15 Score=153.96 Aligned_cols=333 Identities=15% Similarity=0.086 Sum_probs=211.5
Q ss_pred HHhhhCCChhhHHHHHHHHhhhhh-cccchhhhhchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHhh
Q 007654 42 IKSSLNYNQKQIARLGVAKDLGDS-VGFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVG 120 (594)
Q Consensus 42 Lk~~lg~sq~~l~~i~~a~~~G~~-~gi~~G~l~D~~gp~~~l~iG~~~~~~Gy~~~~l~~~g~i~~~s~~~l~~~~~l~ 120 (594)
...+++.|..|+..+.....++.. ..++.|.+.||+|+|.++.++.++..++..++...-. .+..++|.+.+..++.
T Consensus 25 ~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~ 102 (365)
T TIGR00900 25 YVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVAL--LGGLNIWQVYVLAGIL 102 (365)
T ss_pred HHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHH--cCCCcHHHHHHHHHHH
Confidence 455688999999998777777764 4789999999999999999988877676665543321 1112577777666777
Q ss_pred ccccchhhhhHHHHHHHhcC-CCCCceehhhHhhhhhhHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHhhheeecccC
Q 007654 121 NNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIHAPDHANLIFMVAVGPAMVVIALMFIIRPVG 199 (594)
Q Consensus 121 g~G~~~~~taal~t~~k~FP-~~RG~~~Gl~~a~~GLSa~i~s~i~~~~f~~~~~~fll~la~~~~~v~l~~~~~ir~~~ 199 (594)
|.+.+...++......+++| ++||++.|+.-....++..+-..+...+.+ .. +
T Consensus 103 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~--------~~------------------g 156 (365)
T TIGR00900 103 AIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYA--------TL------------------G 156 (365)
T ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH--------Hh------------------h
Confidence 77888888887788889998 579999999998888887655443321100 00 0
Q ss_pred CCCcCCCCCCCchhHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHhhhcchhhhhhcccccCCChhhhhhc
Q 007654 200 GHRQVRPSDSSSFTFIYSVCLLLAAYLMGVMLVEDLVDLNHTVIIIFTVILFVLLFIPIVIPIILSFFLERTDPAEEALL 279 (594)
Q Consensus 200 ~~~~~~~~~~~~f~~~~~~~~~l~~~l~~~~~~~~~~~~s~~~~~~~~~i~~~ll~~~~~~~~~~~~~~~~~~~~~~~~l 279 (594)
. ... +.... ...++..+ +.. ..+. ++
T Consensus 157 ~------------~~~---------~~~~~---------------~~~~~~~~-~~~---------~~~~-~~------- 182 (365)
T TIGR00900 157 I------------KWA---------IWVDA---------------VGFAISAL-LIV---------SVRI-PE------- 182 (365)
T ss_pred H------------HHH---------HHHHH---------------HHHHHHHH-HHH---------hccc-cc-------
Confidence 0 000 00000 00000000 000 0000 00
Q ss_pred CCCCCCCCCCCCCcchhhhhcccccCCCCccCCCchhHHHHHHHHHHHHHHhhhhhhhhhhhccCCCCCCCCCCHHHHhh
Q 007654 280 SKPENMEPGKSNQETDEVILSEVEDEKPKDVDLLPASERRKRIAQLQARLFHAAAEGAVRVKRRRGPHRGEDFTLTQALI 359 (594)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~d~t~~e~l~ 359 (594)
+++++ +++. +. ...++ . ....++.+|
T Consensus 183 --~~~~~-----------------~~~~-~~----~~~~~---------------------~---------~~~~~~~~~ 208 (365)
T TIGR00900 183 --LAASE-----------------IQAL-SN----AVLRD---------------------T---------REGIKFVLK 208 (365)
T ss_pred --CCCcc-----------------cccc-ch----hHHHH---------------------H---------HhHHHHHHc
Confidence 00000 0000 00 00000 0 012456788
Q ss_pred cHHHHHHHHHHHhhhcchhheecchHHHH-HH-hCCCcch--hHHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHH
Q 007654 360 KADFWLIFFSLLLGSGSGLTVIDNLGQMS-QS-LGYDNTH--IFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAV 435 (594)
Q Consensus 360 t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~-~~-~g~~~~~--~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~ 435 (594)
++++|.+.+..++..........+..|.. ++ +|.+..+ ...++.++++.+|++..|.++||.+|++. +..
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~------~~~ 282 (365)
T TIGR00900 209 NPLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMAL------MTG 282 (365)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHH------HHH
Confidence 99999888877766665555553444544 44 5766543 36678889999999999999998876332 222
Q ss_pred HHHHHHHHHHHHhccC--chhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHH
Q 007654 436 AQFVMAIGHIFLGMGW--PGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIY 513 (594)
Q Consensus 436 ~~~~~~~~~ll~~~~~--~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iy 513 (594)
...+..++.+++.... ...+++..++.|+++|........++.|.+..++.|+.+|+......++.. ++|.+.|.++
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~g~~~~g~l~ 361 (365)
T TIGR00900 283 AIFVIGLAILVVGLTPPNFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWP-LGLILAGPLA 361 (365)
T ss_pred HHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 2333333333332222 345667888899999999999999999999999999999999988888887 5899999999
Q ss_pred Hhhh
Q 007654 514 DHEA 517 (594)
Q Consensus 514 d~~~ 517 (594)
|+.|
T Consensus 362 ~~~g 365 (365)
T TIGR00900 362 DHLG 365 (365)
T ss_pred HHcC
Confidence 9753
No 43
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.67 E-value=1.4e-14 Score=153.20 Aligned_cols=342 Identities=15% Similarity=0.109 Sum_probs=203.7
Q ss_pred chhHHHHHHHHHHHHhcCcccccccccHHHHhhhCCChhhHHHHHHHHhhhhhc-ccchhhhhchhhhHHHHHHHHHHHH
Q 007654 13 NNRWLVFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNF 91 (594)
Q Consensus 13 ~~Rw~~l~a~~~i~l~~Gt~Y~fS~ys~~Lk~~lg~sq~~l~~i~~a~~~G~~~-gi~~G~l~D~~gp~~~l~iG~~~~~ 91 (594)
++|+..+++.. ..+..-....+...-|.+++++|+|.+++..+.....++..+ .++.|.+.||+|+|.++.++.++..
T Consensus 3 ~~~~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~ 81 (385)
T TIGR00710 3 AKAFALLLGCL-SILGPLGIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFA 81 (385)
T ss_pred chHHHHHHHHH-HHHHHHHHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHH
Confidence 34444333333 333333334455556888999999999999987666776644 7899999999999999999988877
Q ss_pred HHHHHHHHHHhcCCCChhHHHHHHHHHhhccccchhhhhHHHHHHHhcCC-CCCceehhhHhhhhhhHHHHHHHHHHhcC
Q 007654 92 IGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPK-SRGPVVGILKGFAGLGGAILTQVYTMIHA 170 (594)
Q Consensus 92 ~Gy~~~~l~~~g~i~~~s~~~l~~~~~l~g~G~~~~~taal~t~~k~FP~-~RG~~~Gl~~a~~GLSa~i~s~i~~~~f~ 170 (594)
++..+.... .++|.+.+..++.|.+.+..+++......+++|+ +||++.|+......++..+-..+...+.+
T Consensus 82 ~~~~~~~~~-------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~ 154 (385)
T TIGR00710 82 LSSLGLALS-------NNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILV 154 (385)
T ss_pred HHHHHHHHH-------ccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777654322 2466667667777888888888888888899985 68999999988888887665544321110
Q ss_pred CChHHHHHHHHHHHHHHHHhhheeecccCCCCcCCCCCCCchhHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHH
Q 007654 171 PDHANLIFMVAVGPAMVVIALMFIIRPVGGHRQVRPSDSSSFTFIYSVCLLLAAYLMGVMLVEDLVDLNHTVIIIFTVIL 250 (594)
Q Consensus 171 ~~~~~fll~la~~~~~v~l~~~~~ir~~~~~~~~~~~~~~~f~~~~~~~~~l~~~l~~~~~~~~~~~~s~~~~~~~~~i~ 250 (594)
..+ ....+ .... ....+.
T Consensus 155 --------------------------~~~------------~~~~~---------~~~~---------------~~~~~~ 172 (385)
T TIGR00710 155 --------------------------WLS------------WHAIF---------AFLS---------------LAGILL 172 (385)
T ss_pred --------------------------HcC------------HHHHH---------HHHH---------------HHHHHH
Confidence 000 00000 0000 000000
Q ss_pred HHHhhhcchhhhhhcccccCCChhhhhhcCCCCCCCCCCCCCcchhhhhcccccCCCCccCCCchhHHHHHHHHHHHHHH
Q 007654 251 FVLLFIPIVIPIILSFFLERTDPAEEALLSKPENMEPGKSNQETDEVILSEVEDEKPKDVDLLPASERRKRIAQLQARLF 330 (594)
Q Consensus 251 ~~ll~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (594)
.++... +. + ++++++ +++ + .+ .
T Consensus 173 ~~~~~~---------~~---~---------~~~~~~-----------------~~~--~-----~~--~----------- 194 (385)
T TIGR00710 173 SALIFF---------IL---P---------ETLPYE-----------------ARI--Q-----IS--T----------- 194 (385)
T ss_pred HHHHHH---------hC---C---------CCCCCc-----------------ccC--C-----HH--H-----------
Confidence 000000 00 0 000000 000 0 00 0
Q ss_pred hhhhhhhhhhhccCCCCCCCCCCHHHHhhcHHHHHHHHHHHhhhcchhheecchHHHHH-HhCCCcch--hHHHHHHHhh
Q 007654 331 HAAAEGAVRVKRRRGPHRGEDFTLTQALIKADFWLIFFSLLLGSGSGLTVIDNLGQMSQ-SLGYDNTH--IFVSMISIWN 407 (594)
Q Consensus 331 ~~~~~~~~~~~~~~~p~~~~d~t~~e~l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~-~~g~~~~~--~~Vsl~si~n 407 (594)
. ..+.++.+|++++|.+.+...+..+...........+.+ ..|.++.. ...+...+..
T Consensus 195 ----------~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~ 255 (385)
T TIGR00710 195 ----------Y---------FETFLLLLKSKMFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAM 255 (385)
T ss_pred ----------H---------HHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 0 012356788899998877665554443333333444454 56777653 3667788999
Q ss_pred hhhcccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHh---c-c-C-chhHHHHHHHHHhhhhhccchhHHHHHHhh
Q 007654 408 FLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLG---M-G-W-PGAMYVGTLLIGLGYGAHWAIVPAAASELF 481 (594)
Q Consensus 408 ~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~---~-~-~-~~~l~~~~~liG~~~G~~~~l~p~i~s~~F 481 (594)
.+|+++.|+++||++|++.. .....+..++.+++. . . . ...++....+.|++++..+...+..+.|.+
T Consensus 256 ~~~~~~~g~l~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 329 (385)
T TIGR00710 256 IFGGFLNGRFIKKWGAKSLL------RMGLILFAVSAVLLEITAILGLGSWAMIIGPMMFVGIGNSMISSIAMAYALEDF 329 (385)
T ss_pred HHHHHHHHHHHHhcCHHHHH------HHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 99999999999999875432 112222222222211 1 1 1 223455667789999999999999999998
Q ss_pred ccCchhhhhhHHHhhh-hHHHHHHHHHHHH
Q 007654 482 GLKKFGALYNFLTLAN-PAGSLVFSGLIAS 510 (594)
Q Consensus 482 G~k~~g~nyg~~~~a~-~~g~~~~~~~l~G 510 (594)
+ ++.|+..++..... .+|+. .++ +.|
T Consensus 330 ~-~~~g~~~~~~~~~~~~~g~i-~~~-~~~ 356 (385)
T TIGR00710 330 P-HVAGTASALFGTLRLVLGAI-VGY-LVS 356 (385)
T ss_pred c-ccchHHHHHHHHHHHHHHHH-HHH-HHH
Confidence 6 66788888765443 34444 455 455
No 44
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.67 E-value=1.4e-14 Score=155.36 Aligned_cols=330 Identities=13% Similarity=0.095 Sum_probs=197.5
Q ss_pred cccccccHHHHhhhCCChhhHHHHHHHHhhhhh-cccchhhhhchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHH
Q 007654 33 YLFGSISPVIKSSLNYNQKQIARLGVAKDLGDS-VGFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLW 111 (594)
Q Consensus 33 Y~fS~ys~~Lk~~lg~sq~~l~~i~~a~~~G~~-~gi~~G~l~D~~gp~~~l~iG~~~~~~Gy~~~~l~~~g~i~~~s~~ 111 (594)
+.|+..-|++++++|+|.+|+.++..+..+|.. ..++.|.+.||+|+|.++. +++.....-.+ ..... .+++
T Consensus 8 ~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~-~~~~~~~~~~~--~~~~~----~~~~ 80 (368)
T TIGR00903 8 VTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLF-GSLATFAAAAG--RLLDP----FNYE 80 (368)
T ss_pred HHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHH-HHHHHHHHHHH--HHHHh----ccHH
Confidence 567888899999999999999998777667654 4789999999999988754 44433222111 11111 2466
Q ss_pred HHHHHHHhhccccchhhhhHHHHHHHhcC-CCCCceehhhHhhhhhhHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHh
Q 007654 112 AMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIHAPDHANLIFMVAVGPAMVVIA 190 (594)
Q Consensus 112 ~l~~~~~l~g~G~~~~~taal~t~~k~FP-~~RG~~~Gl~~a~~GLSa~i~s~i~~~~f~~~~~~fll~la~~~~~v~l~ 190 (594)
.+.+.-++.|.|.+. +..+.....+||| ++||++.++...+..+|+.+-..+...+
T Consensus 81 ~l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l---------------------- 137 (368)
T TIGR00903 81 WLLACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKI---------------------- 137 (368)
T ss_pred HHHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------------
Confidence 777777777888875 4555566688887 5799999999999999886654333211
Q ss_pred hheeecccCCCCcCCCCCCCchhHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHhhhcchhhhhhcccccC
Q 007654 191 LMFIIRPVGGHRQVRPSDSSSFTFIYSVCLLLAAYLMGVMLVEDLVDLNHTVIIIFTVILFVLLFIPIVIPIILSFFLER 270 (594)
Q Consensus 191 ~~~~ir~~~~~~~~~~~~~~~f~~~~~~~~~l~~~l~~~~~~~~~~~~s~~~~~~~~~i~~~ll~~~~~~~~~~~~~~~~ 270 (594)
. ...+. + ..+.+ .+ ..+++..++... +.
T Consensus 138 ~----~~~gW---------r---~~f~~--------~~----------------~l~~~~~~~~~~---------~l--- 165 (368)
T TIGR00903 138 Y----TAGGL---------Q---LLIIP--------IA----------------AVAAAGIILVLA---------AL--- 165 (368)
T ss_pred H----Hccch---------H---HHHHH--------HH----------------HHHHHHHHHHHH---------Hc---
Confidence 0 00010 0 10100 00 011111111100 01
Q ss_pred CChhhhhhcCCCCCCCCCCCCCcchhhhhcccccCCCCccCCCchhHHHHHHHHHHHHHHhhhhhhhhhhhccCCCCCCC
Q 007654 271 TDPAEEALLSKPENMEPGKSNQETDEVILSEVEDEKPKDVDLLPASERRKRIAQLQARLFHAAAEGAVRVKRRRGPHRGE 350 (594)
Q Consensus 271 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 350 (594)
+|+++.+ + +.. + .+ . .
T Consensus 166 ---------p~~p~~~-~---------------~~~----~---~~--~---------------------~--------- 181 (368)
T TIGR00903 166 ---------PALPFQA-A---------------EGF----G---FK--D---------------------A--------- 181 (368)
T ss_pred ---------CCCCCCC-C---------------CCc----c---hH--H---------------------H---------
Confidence 1100000 0 000 0 00 0 0
Q ss_pred CCCHHHHhhcHHHHHHHHHHHhhhcchhheecchHHHHHHhCCCcchhHHHHHHHhhhhhcccccchhhhhhhccCCchh
Q 007654 351 DFTLTQALIKADFWLIFFSLLLGSGSGLTVIDNLGQMSQSLGYDNTHIFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRP 430 (594)
Q Consensus 351 d~t~~e~l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~~~g~~~~~~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~ 430 (594)
...+++++|++++|.+++..++....-..+.+-+.++.++.|++... -....+....|-+..++++||+.|+++ |.
T Consensus 182 ~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~~g~s~~~--~~~~~l~~~~g~~g~~~~~d~~~r~~~--r~ 257 (368)
T TIGR00903 182 VKEFGALAGRKDLWIIGAILGFGVALFDNLAIWLEAALRPAGLEDIA--GDAVALAILAGLIGVAVIPDRVARAGL--RS 257 (368)
T ss_pred HHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCChHH--HHHHHHHHHHHHHHHHHhhHHhhhhhh--HH
Confidence 00246789999999999998888777666666788888887876542 222333344455556999999977532 22
Q ss_pred HHHHHHHHHHHHHHHHHhc-cCchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHH
Q 007654 431 VAMAVAQFVMAIGHIFLGM-GWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIA 509 (594)
Q Consensus 431 ~~l~~~~~~~~~~~ll~~~-~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~ 509 (594)
........++++..+++.. .++........+.++..+..++.+..+++|.|..++-|+-.|+.....-+|+.. +|.+.
T Consensus 258 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~-~~~~~ 336 (368)
T TIGR00903 258 IYIRAAALLIAAFFLALAFELNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVA-LALAA 336 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHH-HHHHH
Confidence 2222222223333323322 223233444555667777777778899999999999999999999877788874 77777
Q ss_pred HHHH
Q 007654 510 SYIY 513 (594)
Q Consensus 510 G~iy 513 (594)
+.+.
T Consensus 337 ~~~~ 340 (368)
T TIGR00903 337 MLFI 340 (368)
T ss_pred HHHh
Confidence 7666
No 45
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.67 E-value=2e-14 Score=154.83 Aligned_cols=354 Identities=11% Similarity=0.009 Sum_probs=203.2
Q ss_pred hcchhHHHHHHHHHHHHhcC-cccccccccHHHHhhhCCChhhHHHHHHHHhhhhhc-ccchhhhhchhhhHHHHHHHHH
Q 007654 11 FFNNRWLVFVAAMWIQSCAG-IGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGAL 88 (594)
Q Consensus 11 ~~~~Rw~~l~a~~~i~l~~G-t~Y~fS~ys~~Lk~~lg~sq~~l~~i~~a~~~G~~~-gi~~G~l~D~~gp~~~l~iG~~ 88 (594)
..++.|+..+...+.+++.. ....+...-+++++++|+|+.+++.+.....++..+ .++.|.+.||+|+|.++.++.+
T Consensus 7 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~ 86 (406)
T PRK15402 7 LGRQALLFPLCLVLFEFATYIANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVA 86 (406)
T ss_pred hhHHHHHHHHHHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHH
Confidence 34555655555555554322 223333445779999999999999976666666644 6889999999999999999888
Q ss_pred HHHHHHHHHHHHHhcCCCChhHHHHHHHHHhhccccchhhhhHHHHHHHhcCCC-CCceehhhHhhhhhhHHHHHHHHHH
Q 007654 89 QNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPKS-RGPVVGILKGFAGLGGAILTQVYTM 167 (594)
Q Consensus 89 ~~~~Gy~~~~l~~~g~i~~~s~~~l~~~~~l~g~G~~~~~taal~t~~k~FP~~-RG~~~Gl~~a~~GLSa~i~s~i~~~ 167 (594)
...++..+.... +++|.+....++.|.+.+...........++||++ |+.+.++......++..+-..+..
T Consensus 87 ~~~~~~~~~~~~-------~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~- 158 (406)
T PRK15402 87 FFILTCLAILLA-------QSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGA- 158 (406)
T ss_pred HHHHHHHHHHHH-------ccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 776666654322 14566666666667777766666677777899864 667677666555554433322211
Q ss_pred hcCCChHHHHHHHHHHHHHHHHhhheeecccCCCCcCCCCCCCchhHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHH
Q 007654 168 IHAPDHANLIFMVAVGPAMVVIALMFIIRPVGGHRQVRPSDSSSFTFIYSVCLLLAAYLMGVMLVEDLVDLNHTVIIIFT 247 (594)
Q Consensus 168 ~f~~~~~~fll~la~~~~~v~l~~~~~ir~~~~~~~~~~~~~~~f~~~~~~~~~l~~~l~~~~~~~~~~~~s~~~~~~~~ 247 (594)
.+. +. .+....+. ..+
T Consensus 159 ---------------------~l~----~~--------------------------------------~~w~~~~~-~~~ 174 (406)
T PRK15402 159 ---------------------ALI----HV--------------------------------------LPWRGMFV-LFA 174 (406)
T ss_pred ---------------------HHH----Hc--------------------------------------cCccHHHH-HHH
Confidence 100 00 00000000 001
Q ss_pred HHHHHHhhhcchhhhhhcccccCCChhhhhhcCCCCCCCCCCCCCcchhhhhcccccCCCCccCCCchhHHHHHHHHHHH
Q 007654 248 VILFVLLFIPIVIPIILSFFLERTDPAEEALLSKPENMEPGKSNQETDEVILSEVEDEKPKDVDLLPASERRKRIAQLQA 327 (594)
Q Consensus 248 ~i~~~ll~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (594)
++.++.... . +... ++ +++ +. +++. +.+ +
T Consensus 175 ~~~~~~~~~-----~---~~~~-~~---------~~~-~~----------------~~~~------~~~--~-------- 203 (406)
T PRK15402 175 ALAALSFFG-----L---WRAM-PE---------TAG-RV----------------GEKL------SLK--E-------- 203 (406)
T ss_pred HHHHHHHHH-----H---HHhC-CC---------CCc-cc----------------cccc------cHH--H--------
Confidence 111000000 0 0000 00 000 00 0000 000 0
Q ss_pred HHHhhhhhhhhhhhccCCCCCCCCCCHHHHhhcHHHHHHHHHHHhhhcchhheecchHHHH-HHhCCCcchh--HHHHHH
Q 007654 328 RLFHAAAEGAVRVKRRRGPHRGEDFTLTQALIKADFWLIFFSLLLGSGSGLTVIDNLGQMS-QSLGYDNTHI--FVSMIS 404 (594)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~p~~~~d~t~~e~l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~-~~~g~~~~~~--~Vsl~s 404 (594)
...+.++.++++++|.+.+.+++..............+. +..|.++.+. ......
T Consensus 204 ----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~ 261 (406)
T PRK15402 204 ----------------------LGRDYKLVLKNRRFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVF 261 (406)
T ss_pred ----------------------HHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHH
Confidence 001235678999999988877655443333333334444 3467776532 344566
Q ss_pred HhhhhhcccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHhc------cCchhHHHHHHHHHhhhhhccchhHHHHH
Q 007654 405 IWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLGM------GWPGAMYVGTLLIGLGYGAHWAIVPAAAS 478 (594)
Q Consensus 405 i~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~~------~~~~~l~~~~~liG~~~G~~~~l~p~i~s 478 (594)
++..+|++.+|.++||.++++.. .+..++..++.+++.. .....+.++.++.|++.|..+......+-
T Consensus 262 ~~~~~g~~~~g~l~~r~~~~~~~------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~ 335 (406)
T PRK15402 262 GALIAGNLTLARLTSRRPLRSLI------RMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFGIGLANAGLYRLTL 335 (406)
T ss_pred HHHHHHHHHHHHHHHhcCHHHHH------HHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHhhhHHHHHh
Confidence 78899999999999999774432 2233333333332211 12334566788889988887765544443
Q ss_pred HhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHHhhh
Q 007654 479 ELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYDHEA 517 (594)
Q Consensus 479 ~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~~ 517 (594)
..- .++.|+..+.......++.. +++.+.|.+||..+
T Consensus 336 ~~~-~~~~g~~~~~~~~~~~~~~~-~g~~~~~~l~~~~~ 372 (406)
T PRK15402 336 FSS-DVSKGTVSAAMGMLSMLIFT-VGIELSKHAYLGGG 372 (406)
T ss_pred hhc-cccccHHHHHHHHHHHHHHH-HHHHHHHhcccCCc
Confidence 332 36889999999888888776 58999999998765
No 46
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.66 E-value=1e-14 Score=153.56 Aligned_cols=127 Identities=17% Similarity=0.227 Sum_probs=94.7
Q ss_pred hcCcccccccccHH-HHhhhCCChhhHHHHHHHHhhhhh-cccchhhhhchhhhHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 007654 28 CAGIGYLFGSISPV-IKSSLNYNQKQIARLGVAKDLGDS-VGFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRA 105 (594)
Q Consensus 28 ~~Gt~Y~fS~ys~~-Lk~~lg~sq~~l~~i~~a~~~G~~-~gi~~G~l~D~~gp~~~l~iG~~~~~~Gy~~~~l~~~g~i 105 (594)
...+.|.++.+.|+ +++++|+|..+.+++.....++.. ..++.|.+.||+|+|.++.++.++..++..+.... .
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~--~-- 88 (366)
T TIGR00886 13 SFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLA--V-- 88 (366)
T ss_pred HHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH--h--
Confidence 34455789999996 999999999999998777777764 47899999999999999999999888887765433 1
Q ss_pred CChhHHHHHHHHHhhccccchhhhhHHHHHHHhcC-CCCCceehhhHhhhhhhHHHH
Q 007654 106 PVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAIL 161 (594)
Q Consensus 106 ~~~s~~~l~~~~~l~g~G~~~~~taal~t~~k~FP-~~RG~~~Gl~~a~~GLSa~i~ 161 (594)
. ++|.+.+..++.|.+.+. +..+.....+++| ++||.+.++..+...++..+-
T Consensus 89 -~-~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~ 142 (366)
T TIGR00886 89 -Q-SYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVA 142 (366)
T ss_pred -h-hHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHH
Confidence 0 466666555555555443 4566777889997 579999998876555554433
No 47
>PRK09952 shikimate transporter; Provisional
Probab=99.66 E-value=5.7e-14 Score=153.68 Aligned_cols=181 Identities=12% Similarity=0.096 Sum_probs=114.6
Q ss_pred HHhhcHHHHHHHHHHHhhhcchhh-eecchHHHH-HHhCCCcchh--HHHHHHHhhhhhcccccchhhhhhhccCCchhH
Q 007654 356 QALIKADFWLIFFSLLLGSGSGLT-VIDNLGQMS-QSLGYDNTHI--FVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPV 431 (594)
Q Consensus 356 e~l~t~~Fwll~~~~~~~~g~Gl~-vi~n~~~i~-~~~g~~~~~~--~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~ 431 (594)
+.+|++++|.+.+........+.. ..+...+.. +.+|.+.... ...+.++...++++++|+++||++||+..
T Consensus 244 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~---- 319 (438)
T PRK09952 244 ALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVY---- 319 (438)
T ss_pred HHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHH----
Confidence 366788888775533332222222 223333333 3467665432 33456778899999999999999986432
Q ss_pred HHHHHHHHHHHHHHH--H-h-ccC-chhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHh-hhhHHHHHHH
Q 007654 432 AMAVAQFVMAIGHIF--L-G-MGW-PGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTL-ANPAGSLVFS 505 (594)
Q Consensus 432 ~l~~~~~~~~~~~ll--~-~-~~~-~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~-a~~~g~~~~~ 505 (594)
. ...++..++.+. . . ..+ ...+.+...+.++++|..++..+++++|.|+.++-++-.|+.+. +..+++. ++
T Consensus 320 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~-~~ 396 (438)
T PRK09952 320 I--TGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGG-FT 396 (438)
T ss_pred H--HHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHH-HH
Confidence 1 112222222211 1 1 112 22333455666889999999999999999999887777777653 4456776 58
Q ss_pred HHHHHHHHHhhhhcccCcccccccccccccCCCCCCCCCccccCcccHHHHHHHHHHHHHHHHHHHHHHh
Q 007654 506 GLIASYIYDHEAEKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTSMIMSGLCIVAVILSMILVH 575 (594)
Q Consensus 506 ~~l~G~iyd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~~l~~ 575 (594)
|.+.|.++|.++ +-|...|...++.++++++..+.++.
T Consensus 397 p~i~g~l~~~~~--------------------------------~~~~~~~~~~~~~~~i~~v~~~~~~~ 434 (438)
T PRK09952 397 PFIAAALVTYFG--------------------------------GSWHSVAIYLLAGCLISAMTALLMKD 434 (438)
T ss_pred HHHHHHHHHhcC--------------------------------CCchHHHHHHHHHHHHHHHHHHHccc
Confidence 999999999764 13888888888888888777765543
No 48
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.66 E-value=5e-14 Score=156.26 Aligned_cols=160 Identities=13% Similarity=0.154 Sum_probs=97.0
Q ss_pred CHHHHhhc-HHHHHHHHHHHhhhcchh-heecchHHHHH-HhCCCcch--hHHHHHHHhhhhhcccccchhhhhhhccCC
Q 007654 353 TLTQALIK-ADFWLIFFSLLLGSGSGL-TVIDNLGQMSQ-SLGYDNTH--IFVSMISIWNFLGRVGGGYFSEIIVRDYAY 427 (594)
Q Consensus 353 t~~e~l~t-~~Fwll~~~~~~~~g~Gl-~vi~n~~~i~~-~~g~~~~~--~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~ 427 (594)
++++.+++ ++.|++.+...+....+. .+...+.++.+ .+|++... ...+...+...+|++++|+++||++||+..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~ 319 (490)
T PRK10642 240 SFKEIATKHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFV 319 (490)
T ss_pred CHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH
Confidence 45666653 333333322222222222 23334555564 45776542 355677888999999999999999985421
Q ss_pred chhHHHHHH-HHHHHHHHHHHhc-cCchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHH
Q 007654 428 PRPVAMAVA-QFVMAIGHIFLGM-GWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFS 505 (594)
Q Consensus 428 ~r~~~l~~~-~~~~~~~~ll~~~-~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~ 505 (594)
..... ..+..+..+.... .....++++.++.|+++|..++..+.++.|+|..+.-|+-.|+.+....+++. ++
T Consensus 320 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~-~~ 394 (490)
T PRK10642 320 ----ILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAG-LT 394 (490)
T ss_pred ----HHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHH-HH
Confidence 11111 1111111111222 22344566777788999988999999999999999888888875544444454 47
Q ss_pred HHHHHHHHHhhh
Q 007654 506 GLIASYIYDHEA 517 (594)
Q Consensus 506 ~~l~G~iyd~~~ 517 (594)
|.+.|++.|.++
T Consensus 395 p~i~g~l~~~~~ 406 (490)
T PRK10642 395 PTLAAWLVESTQ 406 (490)
T ss_pred HHHHHHHHHHhC
Confidence 899999988654
No 49
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.65 E-value=5.6e-14 Score=153.16 Aligned_cols=143 Identities=11% Similarity=-0.074 Sum_probs=89.8
Q ss_pred hhcchhHHHHHHHHHHHHhcC-cccccccccHHHHhhhC---CChhhHHHH---HHHHhhhh-hcccchhhhhchhhhHH
Q 007654 10 SFFNNRWLVFVAAMWIQSCAG-IGYLFGSISPVIKSSLN---YNQKQIARL---GVAKDLGD-SVGFLAGSLCEVLPIWG 81 (594)
Q Consensus 10 ~~~~~Rw~~l~a~~~i~l~~G-t~Y~fS~ys~~Lk~~lg---~sq~~l~~i---~~a~~~G~-~~gi~~G~l~D~~gp~~ 81 (594)
+.+.+||..++.+.+...... -.+.++.-++.++++++ .+..|...+ -...-++. ..+++.|.+.||+|+|.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~ 94 (432)
T PRK10406 15 SDTRRRIWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKK 94 (432)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHH
Confidence 445667765555533333222 23457777888999985 555543332 11222333 23678999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCC--CChhHHHHHHHHHhhccccchhhhhHHHHHHHhcC-CCCCceehhhHhh
Q 007654 82 ALLVGALQNFIGYGWVWLIVTGRA--PVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGF 153 (594)
Q Consensus 82 ~l~iG~~~~~~Gy~~~~l~~~g~i--~~~s~~~l~~~~~l~g~G~~~~~taal~t~~k~FP-~~RG~~~Gl~~a~ 153 (594)
++.++.++..++.....++ .+.. ...+.+++.++=++.|.|.+..+.++.....+++| ++||++.++.-.+
T Consensus 95 ~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~ 168 (432)
T PRK10406 95 SMLISVCMMCFGSLVIACL-PGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVT 168 (432)
T ss_pred HHHHHHHHHHHHHHHHhhc-CCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHH
Confidence 9999998877777654322 1110 00123345566677888888888888888899997 5789876665433
No 50
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.65 E-value=2.8e-14 Score=156.49 Aligned_cols=383 Identities=16% Similarity=0.124 Sum_probs=226.1
Q ss_pred ccccccHHHHhhhCCChhhHHHHHHHHhhhhhc-ccchhhhhchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHH
Q 007654 34 LFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWA 112 (594)
Q Consensus 34 ~fS~ys~~Lk~~lg~sq~~l~~i~~a~~~G~~~-gi~~G~l~D~~gp~~~l~iG~~~~~~Gy~~~~l~~~g~i~~~s~~~ 112 (594)
..+..-|.+++++|.|..+..++.....++..+ .++.|.+.||+|+|.++.++.++..++..+.. .. ++++.
T Consensus 20 ~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~-----~~--~~~~~ 92 (485)
T TIGR00711 20 IVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCG-----VA--PNLEL 92 (485)
T ss_pred HHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHh-----Cc--CCHHH
Confidence 345667899999999999999987777777755 67899999999999999999998877776542 22 24677
Q ss_pred HHHHHHhhccccchhhhhHHHHHHHhcC-CCCCceehhhHhhhhhhHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHhh
Q 007654 113 MCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIHAPDHANLIFMVAVGPAMVVIAL 191 (594)
Q Consensus 113 l~~~~~l~g~G~~~~~taal~t~~k~FP-~~RG~~~Gl~~a~~GLSa~i~s~i~~~~f~~~~~~fll~la~~~~~v~l~~ 191 (594)
+.+.-++.|.+.+...+.......+++| ++||++.|+......+++.+-..+...+.+.......+.+.....++.++.
T Consensus 93 l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~ 172 (485)
T TIGR00711 93 MIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVV 172 (485)
T ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHH
Confidence 7777777788888888888888889997 679999999888888887665555443333222222222222222222222
Q ss_pred heeecccCCCCcCCCCCCCchhHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHhhhcchhhhhhcccccCC
Q 007654 192 MFIIRPVGGHRQVRPSDSSSFTFIYSVCLLLAAYLMGVMLVEDLVDLNHTVIIIFTVILFVLLFIPIVIPIILSFFLERT 271 (594)
Q Consensus 192 ~~~ir~~~~~~~~~~~~~~~f~~~~~~~~~l~~~l~~~~~~~~~~~~s~~~~~~~~~i~~~ll~~~~~~~~~~~~~~~~~ 271 (594)
..+..|.+.++++++.|... . . ........+... ..
T Consensus 173 ~~~~~~~~~~~~~~~~d~~g--~----------~-------------------l~~~~~~~~~~~-------~~------ 208 (485)
T TIGR00711 173 AFFILPRDKPAASENFDFLG--L----------L-------------------LLSVGLGSLLYG-------LS------ 208 (485)
T ss_pred HHHHcCCccccccCCCcHHH--H----------H-------------------HHHHHHHHHHHH-------Hh------
Confidence 22222211111111111000 0 0 000000000000 00
Q ss_pred ChhhhhhcCCCCCCCCCCCCCcchhhhhcccccCCCCccCCCchhHHHHHHHHHHHHHHhhhhhhhhhhhccCCCCCCCC
Q 007654 272 DPAEEALLSKPENMEPGKSNQETDEVILSEVEDEKPKDVDLLPASERRKRIAQLQARLFHAAAEGAVRVKRRRGPHRGED 351 (594)
Q Consensus 272 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~d 351 (594)
+ .++ + +... ++.... .......... .-.. +..+++.|
T Consensus 209 ~--------~~~--~-----------------~~~~------~~~~~~-~~~~~~~~~~-~~~~---~~~~~~~~----- 245 (485)
T TIGR00711 209 E--------GPE--R-----------------GWFD------SNEILI-LSITGLVAII-AFVV---WELTDDNP----- 245 (485)
T ss_pred h--------CCC--C-----------------CCCC------chHHHH-HHHHHHHHHH-HHHH---HHHcCCCC-----
Confidence 0 000 0 0000 000000 0000000000 0000 00001111
Q ss_pred CCHHHHhhcHHHHHHHHHHHhhhcchhheecchHHHHHH-hCCCcchh--HHHHHHHhhhhhcccccchhhhhhhccCCc
Q 007654 352 FTLTQALIKADFWLIFFSLLLGSGSGLTVIDNLGQMSQS-LGYDNTHI--FVSMISIWNFLGRVGGGYFSEIIVRDYAYP 428 (594)
Q Consensus 352 ~t~~e~l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~~-~g~~~~~~--~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~ 428 (594)
....+.+|+++||...+..++....-...........++ .|+++.+. ..+..++...++++++|++.||++||+.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~-- 323 (485)
T TIGR00711 246 LVDLRLFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKL-- 323 (485)
T ss_pred ccCHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHH--
Confidence 222468899999988777666544444444445556665 57776533 6677889999999999999999977432
Q ss_pred hhHHHHHHHHHHHHHHHHHh--c-c--CchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHH
Q 007654 429 RPVAMAVAQFVMAIGHIFLG--M-G--WPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLV 503 (594)
Q Consensus 429 r~~~l~~~~~~~~~~~ll~~--~-~--~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~ 503 (594)
+.+...+..++.+++. . . +...+.....+.|++.|..+......+.+.++.++.|+-.|+......+|+.
T Consensus 324 ----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~- 398 (485)
T TIGR00711 324 ----VTIGLILYAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGS- 398 (485)
T ss_pred ----HHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHH-
Confidence 2334444555554433 1 1 1234566678889999988877777888889999999999999888888887
Q ss_pred HHHHHHHHHHHhhh
Q 007654 504 FSGLIASYIYDHEA 517 (594)
Q Consensus 504 ~~~~l~G~iyd~~~ 517 (594)
+++.+.|.++|+..
T Consensus 399 ig~~i~g~~~~~~~ 412 (485)
T TIGR00711 399 IGTALITTILTNRT 412 (485)
T ss_pred HHHHHHHHHHHHHH
Confidence 48889999998643
No 51
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.64 E-value=2.1e-14 Score=159.70 Aligned_cols=115 Identities=14% Similarity=0.048 Sum_probs=85.3
Q ss_pred CCChhhHHHHHHHHhhhhhc-ccchhhhhchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHhhccccc
Q 007654 47 NYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGET 125 (594)
Q Consensus 47 g~sq~~l~~i~~a~~~G~~~-gi~~G~l~D~~gp~~~l~iG~~~~~~Gy~~~~l~~~g~i~~~s~~~l~~~~~l~g~G~~ 125 (594)
+.+..+..++.....+|..+ .++.|.+.||+|+|.++.++.+...++..+..+.... -+..+++.+.++-++.|.+.+
T Consensus 52 ~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~r~l~G~~~g 130 (502)
T TIGR00887 52 PLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGS-SPKSVMATLCFWRFWLGVGIG 130 (502)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCc-ccchHHHHHHHHHHHHHHHHh
Confidence 34555666777777777755 7789999999999999999888877776654433211 111135666777778888899
Q ss_pred hhhhhHHHHHHHhcC-CCCCceehhhHhhhhhhHHHHH
Q 007654 126 YFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILT 162 (594)
Q Consensus 126 ~~~taal~t~~k~FP-~~RG~~~Gl~~a~~GLSa~i~s 162 (594)
..++.+......+|| ++||++.++.-....+|..+-.
T Consensus 131 ~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~ 168 (502)
T TIGR00887 131 GDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGA 168 (502)
T ss_pred hhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHH
Confidence 888889999999998 5699999998888777764443
No 52
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.64 E-value=2.6e-14 Score=154.62 Aligned_cols=335 Identities=13% Similarity=0.014 Sum_probs=197.6
Q ss_pred cccccHHHHhhhCCChhhHHHHHHHHhhhhhc-ccchhhhhchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHH
Q 007654 35 FGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAM 113 (594)
Q Consensus 35 fS~ys~~Lk~~lg~sq~~l~~i~~a~~~G~~~-gi~~G~l~D~~gp~~~l~iG~~~~~~Gy~~~~l~~~g~i~~~s~~~l 113 (594)
...+-|.+.++++.|..+...+.....++..+ .++.|.+.||+|+|.++.++.++..+++.++... ......++|.+
T Consensus 36 ~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~l 113 (417)
T PRK10489 36 LGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALN--AFLPEPSLLAI 113 (417)
T ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHH--HHcCCCcHHHH
Confidence 34456777788889999999987777777754 7889999999999998888877766666554321 11112346666
Q ss_pred HHHHHhhccccchhhhhHHHHHHHhcCC-CCCceehhhHhhhhhhHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHhhh
Q 007654 114 CILIFVGNNGETYFNTAALVSCVQNFPK-SRGPVVGILKGFAGLGGAILTQVYTMIHAPDHANLIFMVAVGPAMVVIALM 192 (594)
Q Consensus 114 ~~~~~l~g~G~~~~~taal~t~~k~FP~-~RG~~~Gl~~a~~GLSa~i~s~i~~~~f~~~~~~fll~la~~~~~v~l~~~ 192 (594)
.+..++.|.+.+...++......+++|+ +|+++.++......++..+-..+...+.+ ..
T Consensus 114 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~--------~~------------ 173 (417)
T PRK10489 114 YLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIA--------AG------------ 173 (417)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHH--------HH------------
Confidence 6555666666666666667777788974 68999888777766665444333321110 00
Q ss_pred eeecccCCCCcCCCCCCCchhHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHhhhcchhhhhhcccccCCC
Q 007654 193 FIIRPVGGHRQVRPSDSSSFTFIYSVCLLLAAYLMGVMLVEDLVDLNHTVIIIFTVILFVLLFIPIVIPIILSFFLERTD 272 (594)
Q Consensus 193 ~~ir~~~~~~~~~~~~~~~f~~~~~~~~~l~~~l~~~~~~~~~~~~s~~~~~~~~~i~~~ll~~~~~~~~~~~~~~~~~~ 272 (594)
+. ...+.+. + ...++..+ +.. ..+ +
T Consensus 174 ------~~------------~~~~~~~--------~----------------~~~~~~~~-~~~---------~l~---~ 198 (417)
T PRK10489 174 ------GV------------AWNYGLA--------A----------------AGTFITLL-PLL---------RLP---A 198 (417)
T ss_pred ------hh------------HHHHHHH--------H----------------HHHHHHHH-HHH---------hCC---C
Confidence 00 0000000 0 00000000 000 000 0
Q ss_pred hhhhhhcCCCCCCCCCCCCCcchhhhhcccccCCCCccCCCchhHHHHHHHHHHHHHHhhhhhhhhhhhccCCCCCCCCC
Q 007654 273 PAEEALLSKPENMEPGKSNQETDEVILSEVEDEKPKDVDLLPASERRKRIAQLQARLFHAAAEGAVRVKRRRGPHRGEDF 352 (594)
Q Consensus 273 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~d~ 352 (594)
.+++++ ++++ +.++ . ..
T Consensus 199 --------~~~~~~----------------~~~~-------~~~~-----------------------~---------~~ 215 (417)
T PRK10489 199 --------LPPPPQ----------------PREH-------PLRS-----------------------L---------LA 215 (417)
T ss_pred --------CCCCCc----------------cccc-------chHH-----------------------H---------HH
Confidence 000000 0000 0000 0 00
Q ss_pred CHHHHhhcHHHHHHHHHHHhhhcchhheecchHHHHHH-hCCCcch--hHHHHHHHhhhhhcccccchhhhhhhccCCch
Q 007654 353 TLTQALIKADFWLIFFSLLLGSGSGLTVIDNLGQMSQS-LGYDNTH--IFVSMISIWNFLGRVGGGYFSEIIVRDYAYPR 429 (594)
Q Consensus 353 t~~e~l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~~-~g~~~~~--~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r 429 (594)
.++..++++.+|.+++..++.... ..+........++ +|.++.. ...++.++++.+|++++|+++||.+++ +
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~----~ 290 (417)
T PRK10489 216 GFRFLLASPVVGGIALLGGLLTMA-SAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPG----L 290 (417)
T ss_pred HHHHHHcChHHHHHHHHHHHHHHH-HhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcc----h
Confidence 124467788887766554433222 2233344555666 6776543 366788899999999999999864321 1
Q ss_pred hHHHHHHHHHHHHHHHHHhccC-chhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHH
Q 007654 430 PVAMAVAQFVMAIGHIFLGMGW-PGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLI 508 (594)
Q Consensus 430 ~~~l~~~~~~~~~~~ll~~~~~-~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l 508 (594)
.+.....+..++.+++...+ ...+.+...+.|++.|.......+++.|.+..++.|+.+|+......+|.. ++|.+
T Consensus 291 --~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~-~g~~l 367 (417)
T PRK10489 291 --LMLLSTLGSFLAVGLFGLMPMWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDA-IGAAL 367 (417)
T ss_pred --HHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHh-HHHHH
Confidence 22333344444444443322 234555667778877776677778899999988899999999888888887 59999
Q ss_pred HHHHHHhhh
Q 007654 509 ASYIYDHEA 517 (594)
Q Consensus 509 ~G~iyd~~~ 517 (594)
.|.+.|..+
T Consensus 368 ~G~l~~~~g 376 (417)
T PRK10489 368 LGGLGAMMT 376 (417)
T ss_pred HHHHHHHhc
Confidence 999999765
No 53
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.64 E-value=3.8e-14 Score=150.54 Aligned_cols=378 Identities=17% Similarity=0.202 Sum_probs=226.0
Q ss_pred ccccccHHHHhhhCCChhhHHHHHHHHhhh-hhcccchhhhhchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHH
Q 007654 34 LFGSISPVIKSSLNYNQKQIARLGVAKDLG-DSVGFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWA 112 (594)
Q Consensus 34 ~fS~ys~~Lk~~lg~sq~~l~~i~~a~~~G-~~~gi~~G~l~D~~gp~~~l~iG~~~~~~Gy~~~~l~~~g~i~~~s~~~ 112 (594)
.|++=.|+|+++.++|.+|+..++++..+. +..=+..|.+.||..||..+.+|-++.++--.++ |.. ++++.
T Consensus 47 nF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~-----Gfs--~s~~~ 119 (448)
T COG2271 47 NFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILF-----GFS--PSLFL 119 (448)
T ss_pred hHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHH-----hhh--hHHHH
Confidence 688999999999999999999985544443 3445678999999999998777766643333332 332 26777
Q ss_pred HHHHHHhhccccchhhhhHHHHHHHhcCC-CCCceehhhHhhhhhhHHHHHHHHH-HhcCCChHHHHHHHHHHHHHHHHh
Q 007654 113 MCILIFVGNNGETYFNTAALVSCVQNFPK-SRGPVVGILKGFAGLGGAILTQVYT-MIHAPDHANLIFMVAVGPAMVVIA 190 (594)
Q Consensus 113 l~~~~~l~g~G~~~~~taal~t~~k~FP~-~RG~~~Gl~~a~~GLSa~i~s~i~~-~~f~~~~~~fll~la~~~~~v~l~ 190 (594)
+.++.++-|.=|++.-.+|-.+-.+|||+ +||+..++--...-.|+++...+.. +++
T Consensus 120 ~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~--------------------- 178 (448)
T COG2271 120 FAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFF--------------------- 178 (448)
T ss_pred HHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHH---------------------
Confidence 77777777776777777999999999996 5999999999999999988875552 110
Q ss_pred hheeecccCCCCcCCCCCCCchhHHHHHHHHHHHHHHHHHHhhhccccchhHHH--HHHHHHHHHhhhcchhhhhhcccc
Q 007654 191 LMFIIRPVGGHRQVRPSDSSSFTFIYSVCLLLAAYLMGVMLVEDLVDLNHTVII--IFTVILFVLLFIPIVIPIILSFFL 268 (594)
Q Consensus 191 ~~~~ir~~~~~~~~~~~~~~~f~~~~~~~~~l~~~l~~~~~~~~~~~~s~~~~~--~~~~i~~~ll~~~~~~~~~~~~~~ 268 (594)
. . + .+...++.. ..++++.+.++. ..+
T Consensus 179 ~-------~-~----------------------------------~~w~~~f~~pgiiaiival~~~~---------~~r 207 (448)
T COG2271 179 A-------F-H----------------------------------GGWRAAFYFPGIIAIIVALILLF---------LLR 207 (448)
T ss_pred H-------h-c----------------------------------cchhHHHHHHHHHHHHHHHHHHH---------HhC
Confidence 0 0 0 001111100 111111111110 111
Q ss_pred cCCChhhhhhcCCCCCCCCCCCCCcchhhhhcccccCCCCccCCCchhHHHHHHHHHHHHHHhhhhhhhhhhhccCCCCC
Q 007654 269 ERTDPAEEALLSKPENMEPGKSNQETDEVILSEVEDEKPKDVDLLPASERRKRIAQLQARLFHAAAEGAVRVKRRRGPHR 348 (594)
Q Consensus 269 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 348 (594)
+.|+++.+ +. +|+...+. .+. + + + .++
T Consensus 208 --d~Pqs~GL-P~--------------------ie~~~~d~-----~e~-----------------~---~-~----~~~ 234 (448)
T COG2271 208 --DRPQSEGL-PP--------------------IEEYRGDP-----LEI-----------------Y---E-E----EKE 234 (448)
T ss_pred --CCccccCC-CC--------------------HHHhhcCc-----hhh-----------------h---h-h----hcc
Confidence 22221221 00 00000000 000 0 0 0 000
Q ss_pred CCCCCHHH-----HhhcHHHHHHHHHHHhhhcchhheecchHHHH-H-HhCCCcc--hhHHHHHHHhhhhhcccccchhh
Q 007654 349 GEDFTLTQ-----ALIKADFWLIFFSLLLGSGSGLTVIDNLGQMS-Q-SLGYDNT--HIFVSMISIWNFLGRVGGGYFSE 419 (594)
Q Consensus 349 ~~d~t~~e-----~l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~-~-~~g~~~~--~~~Vsl~si~n~~GRl~~G~lsD 419 (594)
+++.|.+| .|+++--|++.++.+..--.=..+. .=+|+. . ..+++.. ...++++=++...|-+++||+||
T Consensus 235 ~~~ls~~~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~-dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSD 313 (448)
T COG2271 235 NEGLTAWQIFVKYVLKNKLIWLLALANVFVYVVRYGIN-DWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSD 313 (448)
T ss_pred CCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 11244443 5799999999998887654444433 344443 2 3466654 34899999999999999999999
Q ss_pred hhhhccCCchhHHHHHHHHHHHHHHHHHhccC---chhHHHHHHHHHhh-hhhccchhHHHHHHhhccCc-hhhhhhHHH
Q 007654 420 IIVRDYAYPRPVAMAVAQFVMAIGHIFLGMGW---PGAMYVGTLLIGLG-YGAHWAIVPAAASELFGLKK-FGALYNFLT 494 (594)
Q Consensus 420 ~l~r~~~~~r~~~l~~~~~~~~~~~ll~~~~~---~~~l~~~~~liG~~-~G~~~~l~p~i~s~~FG~k~-~g~nyg~~~ 494 (594)
|+-+.|+-|- .+++ .+...++...+-..+ .....+...++|+- ||=. +.-.+.+--|.+|+ -|+-=|+.-
T Consensus 314 klfkgrR~p~-~~i~--~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPq--mLiGl~a~e~~pK~AaGtA~Gf~G 388 (448)
T COG2271 314 KLFKGRRGPM-ALIF--MLLITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQ--MLIGLAAAEFVPKKAAGTATGFVG 388 (448)
T ss_pred HhcccccchH-HHHH--HHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHH--HHHHHHHhccccHhhccchhchhh
Confidence 9986666542 1222 222222222222222 23344455556665 5544 45555555666666 677777765
Q ss_pred hhhhH-HHHHHHHHHHHHHHHhhhhcccCcccccccccccccCCCCCCCCCccccCcccHHHHHHHHHHHHHHHHHHHHH
Q 007654 495 LANPA-GSLVFSGLIASYIYDHEAEKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTSMIMSGLCIVAVILSMIL 573 (594)
Q Consensus 495 ~a~~~-g~~~~~~~l~G~iyd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~~l 573 (594)
+..-+ |+. ++....|++-|..| +...|++..+.++++.++.+.+
T Consensus 389 lf~Yl~Ga~-~a~~~~g~i~d~~g----------------------------------W~g~Fi~~~~~a~l~~lll~~~ 433 (448)
T COG2271 389 LFAYLIGAA-LAGLPLGYIADTWG----------------------------------WDGGFIVLSIAALLAILLLLPV 433 (448)
T ss_pred hHHHHhhHH-hcCCcceeeEecCC----------------------------------CcchHHHHHHHHHHHHHHHHHH
Confidence 44333 544 45566666666533 6778999999999998888888
Q ss_pred Hhhhhhhhhhh
Q 007654 574 VHRTTNVYSHL 584 (594)
Q Consensus 574 ~~r~r~~~~~~ 584 (594)
.+++++.+++.
T Consensus 434 ~~~~~~~~~~~ 444 (448)
T COG2271 434 WNAEERKIRDE 444 (448)
T ss_pred Hhhcchhhhhh
Confidence 88777766644
No 54
>PRK15075 citrate-proton symporter; Provisional
Probab=99.63 E-value=2.4e-13 Score=148.22 Aligned_cols=119 Identities=12% Similarity=0.001 Sum_probs=85.9
Q ss_pred cccccccHHHHhhhCCChhhHHHH-HHHHhhhh-h-----cccchhhhhchhhhHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 007654 33 YLFGSISPVIKSSLNYNQKQIARL-GVAKDLGD-S-----VGFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRA 105 (594)
Q Consensus 33 Y~fS~ys~~Lk~~lg~sq~~l~~i-~~a~~~G~-~-----~gi~~G~l~D~~gp~~~l~iG~~~~~~Gy~~~~l~~~g~i 105 (594)
..++.+.|+++++++.+++|...+ .....++. + ..++.|.+.||+|+|.+++++.++..++..+.. ..
T Consensus 32 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~l~~-----~~ 106 (434)
T PRK15075 32 FLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVTLSIMASGTLLIA-----FV 106 (434)
T ss_pred HHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHH-----hC
Confidence 457899999999999999886543 32222222 2 246789999999999999999988777666532 22
Q ss_pred CChhHH--------HHHHHHHhhccccchhhhhHHHHHHHhcC-CCCCceehhhHhhhhhhH
Q 007654 106 PVLPLW--------AMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGG 158 (594)
Q Consensus 106 ~~~s~~--------~l~~~~~l~g~G~~~~~taal~t~~k~FP-~~RG~~~Gl~~a~~GLSa 158 (594)
+ +++ ++.+.-++.|.+.+...+++.....+++| ++||++.++......++.
T Consensus 107 ~--~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~ 166 (434)
T PRK15075 107 P--GYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAV 166 (434)
T ss_pred C--cHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHH
Confidence 2 233 23455667788888777778888899997 579999998776655554
No 55
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.63 E-value=1.7e-15 Score=157.50 Aligned_cols=328 Identities=20% Similarity=0.318 Sum_probs=201.7
Q ss_pred ccccH-HHHhhhCCChhhHHHHHHHHhhhh-hcccchhhhhchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHH
Q 007654 36 GSISP-VIKSSLNYNQKQIARLGVAKDLGD-SVGFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAM 113 (594)
Q Consensus 36 S~ys~-~Lk~~lg~sq~~l~~i~~a~~~G~-~~gi~~G~l~D~~gp~~~l~iG~~~~~~Gy~~~~l~~~g~i~~~s~~~l 113 (594)
...-+ .+++++|+|.+|++++.....++. ..+++.|.+.||+|+|.++.++.++..++..... +. + +.|.+
T Consensus 16 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~--~~---~--~~~~~ 88 (352)
T PF07690_consen 16 SPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLA--FA---S--NFWLL 88 (352)
T ss_dssp HHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHH--HH---C--CHHHH
T ss_pred HHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhh--hh---h--hHHHH
Confidence 33344 788999999999999877777766 4588999999999999999999999888844333 22 1 35666
Q ss_pred HHHHHhhccccchhhhhHHHHHHHhcCC-CCCceehhhHhhhhhhHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHhhh
Q 007654 114 CILIFVGNNGETYFNTAALVSCVQNFPK-SRGPVVGILKGFAGLGGAILTQVYTMIHAPDHANLIFMVAVGPAMVVIALM 192 (594)
Q Consensus 114 ~~~~~l~g~G~~~~~taal~t~~k~FP~-~RG~~~Gl~~a~~GLSa~i~s~i~~~~f~~~~~~fll~la~~~~~v~l~~~ 192 (594)
.+..++.|.+.+..+.+......+++|+ +|+++.|+......+|..+-..+...+. +..+
T Consensus 89 ~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~-~~~~------------------ 149 (352)
T PF07690_consen 89 LIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLI-SYFG------------------ 149 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCC-CHCH------------------
T ss_pred hhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhh-hccc------------------
Confidence 6777788888888899999999999986 8999999999999999866655543222 1000
Q ss_pred eeecccCCCCcCCCCCCCchhHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHhhhcchhhhhhcccccCCC
Q 007654 193 FIIRPVGGHRQVRPSDSSSFTFIYSVCLLLAAYLMGVMLVEDLVDLNHTVIIIFTVILFVLLFIPIVIPIILSFFLERTD 272 (594)
Q Consensus 193 ~~ir~~~~~~~~~~~~~~~f~~~~~~~~~l~~~l~~~~~~~~~~~~s~~~~~~~~~i~~~ll~~~~~~~~~~~~~~~~~~ 272 (594)
+...+.+. + ....+..++... +..++++
T Consensus 150 -------------------~~~~~~~~--------~----------------~~~~~~~il~~~---------~~~~~~~ 177 (352)
T PF07690_consen 150 -------------------WRWAFLIS--------A----------------ILSLIAAILFIL---------FLPEPPP 177 (352)
T ss_dssp -------------------HCCHHHHH--------H----------------HHHHHHHHHHHC---------CC---ST
T ss_pred -------------------cccccccc--------c----------------chhhhhhhhHhh---------hhhhccc
Confidence 00000000 0 000001000000 1100000
Q ss_pred hhhhhhcCCCCCCCCCCCCCcchhhhhcccccCCCCccCCCchhHHHHHHHHHHHHHHhhhhhhhhhhhccCCCCCCCCC
Q 007654 273 PAEEALLSKPENMEPGKSNQETDEVILSEVEDEKPKDVDLLPASERRKRIAQLQARLFHAAAEGAVRVKRRRGPHRGEDF 352 (594)
Q Consensus 273 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~d~ 352 (594)
+ .+.+ ++++++ ++ +++ +. .+
T Consensus 178 ~-----------~~~~---------------~~~~~~--------~~---------------------~~~--~~--~~- 197 (352)
T PF07690_consen 178 P-----------RERE---------------SPKESE--------SK---------------------KPK--PL--KP- 197 (352)
T ss_dssp T-----------TT-----------------SSTTTT-------------------------------HHH--CC--CH-
T ss_pred c-----------cccc---------------cccccc--------cc---------------------ccc--cc--cc-
Confidence 0 0000 000000 00 000 00 01
Q ss_pred CHHHHhhcHHHHHHHHHHHhhhcchhheecchHHH--HHHhCCC-cchh--HHHHHHHhhhhhcccccchhhhhhhccCC
Q 007654 353 TLTQALIKADFWLIFFSLLLGSGSGLTVIDNLGQM--SQSLGYD-NTHI--FVSMISIWNFLGRVGGGYFSEIIVRDYAY 427 (594)
Q Consensus 353 t~~e~l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i--~~~~g~~-~~~~--~Vsl~si~n~~GRl~~G~lsD~l~r~~~~ 427 (594)
.+++..+++.+|.+++.+++....-.. .....+. .+..|.+ .... ..++.++...+++++.|.++||+++++..
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 276 (352)
T PF07690_consen 198 GFKSLFKNPVLWILLIAFFLFFFVFSG-FSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRL 276 (352)
T ss_dssp -CTHHHHHHCCHHHHHHHHHHHHHHHH-HHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred ccccccccchhhhhhhhhhHHHHHHHH-hhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHH
Confidence 245678888888555555554323223 3344443 4567887 4433 57889999999999999999998763321
Q ss_pred chhHHHHHHHHHHHHHHHHHhcc-CchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHH
Q 007654 428 PRPVAMAVAQFVMAIGHIFLGMG-WPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSG 506 (594)
Q Consensus 428 ~r~~~l~~~~~~~~~~~ll~~~~-~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~ 506 (594)
........+..++..+.... +....++..++.|+++|..+.....++.|.++.++.|+.+|+..+...+|+. ++|
T Consensus 277 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~-igP 352 (352)
T PF07690_consen 277 ---LIAILLLILGALGLLLLPFSSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGI-IGP 352 (352)
T ss_dssp ---HHHHHHHHHHHHHHCCSHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHH-HHH
T ss_pred ---HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH-HCC
Confidence 11122222222211111112 2345666888899999999999999999999999999999999988888877 365
No 56
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.62 E-value=7e-14 Score=147.31 Aligned_cols=159 Identities=16% Similarity=0.088 Sum_probs=107.0
Q ss_pred CHHHHhhcHH--HHHHHHHHHhhhcchhheecchHHHHH-HhCCCcch--hHHHHHHHhhhhhcccccchhhhhhhccCC
Q 007654 353 TLTQALIKAD--FWLIFFSLLLGSGSGLTVIDNLGQMSQ-SLGYDNTH--IFVSMISIWNFLGRVGGGYFSEIIVRDYAY 427 (594)
Q Consensus 353 t~~e~l~t~~--Fwll~~~~~~~~g~Gl~vi~n~~~i~~-~~g~~~~~--~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~ 427 (594)
+.++.+++++ +|......++.............++.+ ..|.+... ...++..+.+.++++++|+++||++||+..
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~ 288 (394)
T TIGR00883 209 PIRETLTKHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVL 288 (394)
T ss_pred CHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHH
Confidence 3456666655 777766666554444444455666664 46766543 366788899999999999999999885421
Q ss_pred chhHHHHHHHHHHHHHH--HH-Hhc-cCchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHH-hhhhHHHH
Q 007654 428 PRPVAMAVAQFVMAIGH--IF-LGM-GWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLT-LANPAGSL 502 (594)
Q Consensus 428 ~r~~~l~~~~~~~~~~~--ll-~~~-~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~-~a~~~g~~ 502 (594)
+....+....+. +. +.. .+...++....+.|+++|..+......+.|.+..++-++-+|+.+ .+..+|+.
T Consensus 289 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~ 363 (394)
T TIGR00883 289 -----IIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGG 363 (394)
T ss_pred -----HHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhh
Confidence 111111111121 11 111 223345556777899999999999999999999988888888754 45566765
Q ss_pred HHHHHHHHHHHHhhh
Q 007654 503 VFSGLIASYIYDHEA 517 (594)
Q Consensus 503 ~~~~~l~G~iyd~~~ 517 (594)
++|.+.|.++|+.+
T Consensus 364 -~~p~~~g~l~~~~g 377 (394)
T TIGR00883 364 -FAPYIAAALVAMTG 377 (394)
T ss_pred -HHHHHHHHHHHHcC
Confidence 58999999999876
No 57
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.62 E-value=4.9e-13 Score=148.63 Aligned_cols=381 Identities=13% Similarity=0.030 Sum_probs=220.6
Q ss_pred cccccHHHHhhhCCChhhHHHHHHHHhhhh-hcccchhhhhchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHH
Q 007654 35 FGSISPVIKSSLNYNQKQIARLGVAKDLGD-SVGFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAM 113 (594)
Q Consensus 35 fS~ys~~Lk~~lg~sq~~l~~i~~a~~~G~-~~gi~~G~l~D~~gp~~~l~iG~~~~~~Gy~~~~l~~~g~i~~~s~~~l 113 (594)
-++--|++.+++|.|++|++++..+-.++. .+.++.|.+.||+|+|.++.+|.+...+|..+... . .++|++
T Consensus 25 v~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~~~-----a--~~~~~l 97 (495)
T PRK14995 25 LHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAAAF-----S--PTASWL 97 (495)
T ss_pred HHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH-----c--CCHHHH
Confidence 444578999999999999999877777765 45788999999999999999999988888775432 2 246777
Q ss_pred HHHHHhhccccchhhhhHHHHHHHhc-C-CCCCceehhhHhhhhhhHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHhh
Q 007654 114 CILIFVGNNGETYFNTAALVSCVQNF-P-KSRGPVVGILKGFAGLGGAILTQVYTMIHAPDHANLIFMVAVGPAMVVIAL 191 (594)
Q Consensus 114 ~~~~~l~g~G~~~~~taal~t~~k~F-P-~~RG~~~Gl~~a~~GLSa~i~s~i~~~~f~~~~~~fll~la~~~~~v~l~~ 191 (594)
.+.-++.|.|.+..+.+......++| | ++||++.|+.....++++.+-..+...+.+.-.....+.+.....++.++.
T Consensus 98 i~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l 177 (495)
T PRK14995 98 IATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGL 177 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHH
Confidence 76667777777777777777777888 4 579999999999999987665555544433322233332222112222222
Q ss_pred heeecccCCCCcCCCCCCCchhHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHhhhcchhhhhhcccccCC
Q 007654 192 MFIIRPVGGHRQVRPSDSSSFTFIYSVCLLLAAYLMGVMLVEDLVDLNHTVIIIFTVILFVLLFIPIVIPIILSFFLERT 271 (594)
Q Consensus 192 ~~~ir~~~~~~~~~~~~~~~f~~~~~~~~~l~~~l~~~~~~~~~~~~s~~~~~~~~~i~~~ll~~~~~~~~~~~~~~~~~ 271 (594)
..+..|.++.+++++.|.... +....+..++...+.+...+...........+...+++. . +
T Consensus 178 ~~~~l~~~~~~~~~~~d~~g~-----~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~----f----- 239 (495)
T PRK14995 178 TARYVPRQAGRRDQPLNLGHA-----LMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLG----L----F----- 239 (495)
T ss_pred HHHhCCCCCCCCCCCCChHhH-----HHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHH----H----H-----
Confidence 222222211111111111100 000001000111110000000000000000000000000 0 0
Q ss_pred ChhhhhhcCCCCCCCCCCCCCcchhhhhcccccCCCCccCCCchhHHHHHHHHHHHHHHhhhhhhhhhhhccCCCCCCCC
Q 007654 272 DPAEEALLSKPENMEPGKSNQETDEVILSEVEDEKPKDVDLLPASERRKRIAQLQARLFHAAAEGAVRVKRRRGPHRGED 351 (594)
Q Consensus 272 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~d 351 (594)
.. . +.+.+.|
T Consensus 240 --------------------------------------------------------------~~--~-e~~~~~p----- 249 (495)
T PRK14995 240 --------------------------------------------------------------IR--T-QLAASRP----- 249 (495)
T ss_pred --------------------------------------------------------------HH--H-HhcCCCC-----
Confidence 00 0 0000001
Q ss_pred CCHHHHhhcHHHHHHHHHHHhhhcchhheecchHHHHHH-hCCCcchh--HHHHHHHhhhhhcccccchhhhhhhccCCc
Q 007654 352 FTLTQALIKADFWLIFFSLLLGSGSGLTVIDNLGQMSQS-LGYDNTHI--FVSMISIWNFLGRVGGGYFSEIIVRDYAYP 428 (594)
Q Consensus 352 ~t~~e~l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~~-~g~~~~~~--~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~ 428 (594)
.-..+++|++.|+...+..++...+-...........|. .|+++.+. +....++...++.++.|.+.||+++|+
T Consensus 250 ~~~~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~--- 326 (495)
T PRK14995 250 MIDMRLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRL--- 326 (495)
T ss_pred CcCHHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchH---
Confidence 112568899999887766665544332222333344444 57776543 667788999999999999999997733
Q ss_pred hhHHHHHHHHHHHHHHHHHh--c--cCchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHH
Q 007654 429 RPVAMAVAQFVMAIGHIFLG--M--GWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVF 504 (594)
Q Consensus 429 r~~~l~~~~~~~~~~~ll~~--~--~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~ 504 (594)
.+....++..++.+++. . .+....+...++.|++.|..+......+.+....++.|.-.++..+...+|+. +
T Consensus 327 ---~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~-~ 402 (495)
T PRK14995 327 ---VATGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAG-L 402 (495)
T ss_pred ---HHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHH-H
Confidence 12333333444433222 1 12234566778889999998887888888888888899988888888888877 4
Q ss_pred HHHHHHHHHHhhh
Q 007654 505 SGLIASYIYDHEA 517 (594)
Q Consensus 505 ~~~l~G~iyd~~~ 517 (594)
|+.+.|.++|..-
T Consensus 403 G~ai~g~i~~~~~ 415 (495)
T PRK14995 403 GIAIFGLLLSRSY 415 (495)
T ss_pred HHHHHHHHHHHHH
Confidence 8889999988643
No 58
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.62 E-value=3e-13 Score=142.82 Aligned_cols=174 Identities=17% Similarity=0.113 Sum_probs=117.4
Q ss_pred HhhcHHHHHHHHHHHhhhcchhheecchHHHH-HHhCCCcchh--HHHHHHHhhhhhcccccchhhhhhhccCCchhHHH
Q 007654 357 ALIKADFWLIFFSLLLGSGSGLTVIDNLGQMS-QSLGYDNTHI--FVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAM 433 (594)
Q Consensus 357 ~l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~-~~~g~~~~~~--~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l 433 (594)
.++++++|.++...++..+...+......... ++.|.+.... ..++..+.+..+++..|+++||++||+..
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~------ 268 (375)
T TIGR00899 195 LLASRDTRLLFVACTLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLM------ 268 (375)
T ss_pred hhcCcchHHHHHHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHH------
Confidence 56777888777666555443333333444444 4567766533 45566677888999999999999875421
Q ss_pred HHHHHHHHHHHHHHh-ccCchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHH
Q 007654 434 AVAQFVMAIGHIFLG-MGWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYI 512 (594)
Q Consensus 434 ~~~~~~~~~~~ll~~-~~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~i 512 (594)
.....+..+.++.+. ..+...+++...+.|+++|.........+.|.+. ++.++..++......+|.. ++|.+.|.+
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~-~g~~~~g~~ 346 (375)
T TIGR00899 269 LLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGILAGIGMLYFQDLMP-GRAGAATTLYTNTGRVGWI-IAGSVGGIL 346 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc-chhhHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 122222222222222 2233345556677799999888888888899986 5668888888777778877 589999999
Q ss_pred HHhhhhcccCcccccccccccccCCCCCCCCCccccCcccHHHHHHHHHHHHHHHHHHHH
Q 007654 513 YDHEAEKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTSMIMSGLCIVAVILSMI 572 (594)
Q Consensus 513 yd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~~ 572 (594)
.|..+ |+..|.+.+..++++.++..+
T Consensus 347 ~~~~g----------------------------------~~~~~~~~~~~~~~~~~~~~~ 372 (375)
T TIGR00899 347 AERWS----------------------------------YHAVYWFAIVMLIVALFCLLL 372 (375)
T ss_pred HHhcc----------------------------------chhHHHHHHHHHHHHHHHHhe
Confidence 98754 888999988888887776654
No 59
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.61 E-value=6.7e-13 Score=145.63 Aligned_cols=129 Identities=16% Similarity=0.072 Sum_probs=93.9
Q ss_pred ccccccc---HHHHhhh--------CCChhhHHHHHHHHhhhhhc-ccchhhhhchhhhHHHHHHHHHHHHHHHHHHHHH
Q 007654 33 YLFGSIS---PVIKSSL--------NYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLI 100 (594)
Q Consensus 33 Y~fS~ys---~~Lk~~l--------g~sq~~l~~i~~a~~~G~~~-gi~~G~l~D~~gp~~~l~iG~~~~~~Gy~~~~l~ 100 (594)
|..++++ +.+++.+ +++..+.+++.....+|..+ .++.|.+.||+|+|.+++++.++..++.....+.
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~ 105 (479)
T PRK10077 26 YDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWP 105 (479)
T ss_pred cccceehHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhh
Confidence 4444444 4466666 88999999987777777754 7889999999999999999999877776654432
Q ss_pred H---hcCC-CC-hhHHHHHHHHHhhccccchhhhhHHHHHHHhcCC-CCCceehhhHhhhhhhHHHH
Q 007654 101 V---TGRA-PV-LPLWAMCILIFVGNNGETYFNTAALVSCVQNFPK-SRGPVVGILKGFAGLGGAIL 161 (594)
Q Consensus 101 ~---~g~i-~~-~s~~~l~~~~~l~g~G~~~~~taal~t~~k~FP~-~RG~~~Gl~~a~~GLSa~i~ 161 (594)
. .... +. ..++.+.++-++.|.+.+..+..+.....+++|+ +||++.|+.-.+..+|..+-
T Consensus 106 ~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~ 172 (479)
T PRK10077 106 EFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVV 172 (479)
T ss_pred ccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHH
Confidence 1 0000 11 1244455677888889998888888889999984 59999999888777776554
No 60
>PRK11043 putative transporter; Provisional
Probab=99.61 E-value=2.4e-13 Score=146.02 Aligned_cols=346 Identities=14% Similarity=0.063 Sum_probs=195.9
Q ss_pred hHHHHHHHHHHHHhcCcccccccccHHHHhhhCCChhhHHHHHHHHhhhhh-cccchhhhhchhhhHHHHHHHHHHHHHH
Q 007654 15 RWLVFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDS-VGFLAGSLCEVLPIWGALLVGALQNFIG 93 (594)
Q Consensus 15 Rw~~l~a~~~i~l~~Gt~Y~fS~ys~~Lk~~lg~sq~~l~~i~~a~~~G~~-~gi~~G~l~D~~gp~~~l~iG~~~~~~G 93 (594)
.|..+..+++.++...+.+.+.-.-+++++++|+|.+++..+.....++.. .+++.|.+.||+|+|.++.++.++..++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 84 (401)
T PRK11043 5 KGFLVYLAGLSMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALG 84 (401)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHH
Confidence 445555555555555555555555566789999999999998777777765 4789999999999999999988877666
Q ss_pred HHHHHHHHhcCCCChhHHHHHHHHHhhccccchhhhhHHHHHHHhcCCC-CCceehhhHhhhhhhHHHHHHHHHHhcCCC
Q 007654 94 YGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPKS-RGPVVGILKGFAGLGGAILTQVYTMIHAPD 172 (594)
Q Consensus 94 y~~~~l~~~g~i~~~s~~~l~~~~~l~g~G~~~~~taal~t~~k~FP~~-RG~~~Gl~~a~~GLSa~i~s~i~~~~f~~~ 172 (594)
..+... . .++|.+.+..++.|.|.+...........++||++ |+.+.+......++++.+-..+..
T Consensus 85 ~~~~~~--~-----~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~------ 151 (401)
T PRK11043 85 SLGMLW--V-----ESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGA------ 151 (401)
T ss_pred HHHHHH--h-----cCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHH------
Confidence 665432 1 24666665555656666555444445566789875 565555555555555443322221
Q ss_pred hHHHHHHHHHHHHHHHHhhheeecccCCCCcCCCCCCCchhHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHH
Q 007654 173 HANLIFMVAVGPAMVVIALMFIIRPVGGHRQVRPSDSSSFTFIYSVCLLLAAYLMGVMLVEDLVDLNHTVIIIFTVILFV 252 (594)
Q Consensus 173 ~~~fll~la~~~~~v~l~~~~~ir~~~~~~~~~~~~~~~f~~~~~~~~~l~~~l~~~~~~~~~~~~s~~~~~~~~~i~~~ 252 (594)
.+. .. .+....+. ..++..++
T Consensus 152 ----------------~l~----~~--------------------------------------~g~~~~~~-~~~~~~~~ 172 (401)
T PRK11043 152 ----------------WLL----NH--------------------------------------FGWQAIFA-TLFAITLL 172 (401)
T ss_pred ----------------HHH----hc--------------------------------------CChHHHHH-HHHHHHHH
Confidence 100 00 00000000 00000000
Q ss_pred HhhhcchhhhhhcccccCCChhhhhhcCCCCCCCCCCCCCcchhhhhcccccCCCCccCCCchhHHHHHHHHHHHHHHhh
Q 007654 253 LLFIPIVIPIILSFFLERTDPAEEALLSKPENMEPGKSNQETDEVILSEVEDEKPKDVDLLPASERRKRIAQLQARLFHA 332 (594)
Q Consensus 253 ll~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (594)
..+. . . +.. ++ ++ + ++. .
T Consensus 173 ~~~~-----~-~-~~~--~~---------~~--~------------------~~~-----------~------------- 190 (401)
T PRK11043 173 LILP-----T-L-RLK--PS---------KK--A------------------RKQ-----------S------------- 190 (401)
T ss_pred HHHH-----H-H-HcC--CC---------CC--c------------------ccc-----------c-------------
Confidence 0000 0 0 000 00 00 0 000 0
Q ss_pred hhhhhhhhhccCCCCCCCCCCHHHHhhcHHHHHHHHHHHhhhcchhheecchHHHHHHhCCCcchh--HHHHHHHhhhhh
Q 007654 333 AAEGAVRVKRRRGPHRGEDFTLTQALIKADFWLIFFSLLLGSGSGLTVIDNLGQMSQSLGYDNTHI--FVSMISIWNFLG 410 (594)
Q Consensus 333 ~~~~~~~~~~~~~p~~~~d~t~~e~l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~~~g~~~~~~--~Vsl~si~n~~G 410 (594)
+ ...+.++.+|++++|...+.+.+..+.-..+.+....+.++.|.+.... ......++..+|
T Consensus 191 -------------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~g 254 (401)
T PRK11043 191 -------------Q---DALTFKQLLKSKTYLGNVLIFAACSAAFFAWLTGSPFILEQMGYSPADIGLSYVPQTIAFLVG 254 (401)
T ss_pred -------------h---HHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHhHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Confidence 0 0113467888999998776665554443444445555666778776533 344556778889
Q ss_pred cccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHhc--c-CchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchh
Q 007654 411 RVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLGM--G-WPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFG 487 (594)
Q Consensus 411 Rl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~~--~-~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g 487 (594)
++..+.+.||+++++.. + ...+...+..+..+++.. . ....+.+...+.|+++|..+......+.|.+. ++-|
T Consensus 255 ~~~~~~l~~r~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g 330 (401)
T PRK11043 255 GYGCRAALQKWGGEQLL-P--WLLVLFAVSVIAIWLASLLSHPSLVPLLIPFCVMAAANGAIYPIVVAQALRPFP-QATG 330 (401)
T ss_pred HHHHHHHHHHcCHHHHH-H--HHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCc-ccCh
Confidence 99999999998775432 1 112222222222222221 1 22234455667788888888777777777775 6788
Q ss_pred hhhhHHHhhhhHHHHHHHHHHHHHHHHh
Q 007654 488 ALYNFLTLANPAGSLVFSGLIASYIYDH 515 (594)
Q Consensus 488 ~nyg~~~~a~~~g~~~~~~~l~G~iyd~ 515 (594)
+..|+..+....++. .++.+.|.+.|.
T Consensus 331 ~~~g~~~~~~~~~~~-~~~~~~g~l~~~ 357 (401)
T PRK11043 331 KAAALQNTLQLGLCF-LASLLVSALIST 357 (401)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHccCC
Confidence 888888766555555 366778877763
No 61
>PRK10054 putative transporter; Provisional
Probab=99.60 E-value=2.6e-13 Score=146.43 Aligned_cols=145 Identities=10% Similarity=0.019 Sum_probs=91.7
Q ss_pred hhcchhHHHHHHHHHHHHhcCcccccccccHHHHhhhCCChhhHHHHHHHHhhh-hhcccchhhhhchhhhHHHHHHHHH
Q 007654 10 SFFNNRWLVFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLG-DSVGFLAGSLCEVLPIWGALLVGAL 88 (594)
Q Consensus 10 ~~~~~Rw~~l~a~~~i~l~~Gt~Y~fS~ys~~Lk~~lg~sq~~l~~i~~a~~~G-~~~gi~~G~l~D~~gp~~~l~iG~~ 88 (594)
+..+|+...+..+.++ ...|....+...++.+++++|+|.+|+.++.....++ ....++.|.+.||+|+|.++.++.+
T Consensus 3 ~~~~~~~~~l~~~~~~-~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~ 81 (395)
T PRK10054 3 LSLRRSTSALLASSLL-LTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAIT 81 (395)
T ss_pred CCCCchHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHH
Confidence 3444444344433333 3444445556677889999999999999975544444 4558899999999999999999998
Q ss_pred HHHHHHHHHHHHHhcCCCChhHHHHHHHHHhhccccchhhhhHHHHHHHhcC-CCCCceehhhHhhhhhhHHHHH
Q 007654 89 QNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILT 162 (594)
Q Consensus 89 ~~~~Gy~~~~l~~~g~i~~~s~~~l~~~~~l~g~G~~~~~taal~t~~k~FP-~~RG~~~Gl~~a~~GLSa~i~s 162 (594)
...+++.++. +.+ ++|.+.+...+.+.+.+...++.-.-..+.+| ++||++.|+.-....++..+-.
T Consensus 82 ~~~~~~~~~~--~~~-----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp 149 (395)
T PRK10054 82 AFASGFIAIP--LVN-----NVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGP 149 (395)
T ss_pred HHHHHHHHHH--HHh-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHH
Confidence 8777776542 222 34554433333333333333333333456665 4689998888777777665543
No 62
>PRK10133 L-fucose transporter; Provisional
Probab=99.58 E-value=1.3e-12 Score=143.34 Aligned_cols=358 Identities=13% Similarity=0.156 Sum_probs=203.8
Q ss_pred cccccccHHHHhhhCCChhhHHHHHHHHhhhhhc-ccchhhhhchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHH
Q 007654 33 YLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLW 111 (594)
Q Consensus 33 Y~fS~ys~~Lk~~lg~sq~~l~~i~~a~~~G~~~-gi~~G~l~D~~gp~~~l~iG~~~~~~Gy~~~~l~~~g~i~~~s~~ 111 (594)
-.=+.+-|++|+.+|+|.+|..++.....+|..+ +++.|.+.||+|+|.++.+|.+...+|..+.... ... ++++
T Consensus 43 ~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~--~~a--~~~~ 118 (438)
T PRK10133 43 NLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPA--AEI--MNYT 118 (438)
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHH--Hhc--CCHH
Confidence 3455678999999999999999987777777754 8899999999999999999999988888764321 112 3577
Q ss_pred HHHHHHHhhccccchhhhhHHHHHHHhcCCCCC-ceehhhHhhhhhhHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHh
Q 007654 112 AMCILIFVGNNGETYFNTAALVSCVQNFPKSRG-PVVGILKGFAGLGGAILTQVYTMIHAPDHANLIFMVAVGPAMVVIA 190 (594)
Q Consensus 112 ~l~~~~~l~g~G~~~~~taal~t~~k~FP~~RG-~~~Gl~~a~~GLSa~i~s~i~~~~f~~~~~~fll~la~~~~~v~l~ 190 (594)
.+.+.-++.|.|.+..++++-....++.|++|+ ...++.-+++++|+.+=..+...+.
T Consensus 119 ~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~--------------------- 177 (438)
T PRK10133 119 LFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLI--------------------- 177 (438)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------------
Confidence 777777888888888888777766676776655 4678888888887755543332110
Q ss_pred hheeecccCCCCc-C--CCCCCCchhHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHhhhcchhhhhhccc
Q 007654 191 LMFIIRPVGGHRQ-V--RPSDSSSFTFIYSVCLLLAAYLMGVMLVEDLVDLNHTVIIIFTVILFVLLFIPIVIPIILSFF 267 (594)
Q Consensus 191 ~~~~ir~~~~~~~-~--~~~~~~~f~~~~~~~~~l~~~l~~~~~~~~~~~~s~~~~~~~~~i~~~ll~~~~~~~~~~~~~ 267 (594)
.... +...... . ..++.......+. .-+-..|+. ...++.++++.. . +.
T Consensus 178 -~~~~-~~~~~~~~~~l~~~~~~~w~~~~~-~~w~~~f~~-----------------~~~v~~~~~~~~-----~---~~ 229 (438)
T PRK10133 178 -LSNV-PHQSQDVLDKMTPEQLSAYKHSLV-LSVQTPYMI-----------------IVAIVLLVALLI-----M---LT 229 (438)
T ss_pred -hcCC-cccchhhhhccChhhHHHHHHHHH-HHHHHHHHH-----------------HHHHHHHHHHHH-----H---Hh
Confidence 0000 0000000 0 0000000000000 000000100 000111000000 0 00
Q ss_pred ccCCChhhhhhcCCCCCCCCCCCCCcchhhhhcccccCCCCccCCCchhHHHHHHHHHHHHHHhhhhhhhhhhhccCCCC
Q 007654 268 LERTDPAEEALLSKPENMEPGKSNQETDEVILSEVEDEKPKDVDLLPASERRKRIAQLQARLFHAAAEGAVRVKRRRGPH 347 (594)
Q Consensus 268 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 347 (594)
. .++ .++ + ++++++ .+ +
T Consensus 230 ~-~p~---------~~~-~-----------------~~~~~~--------------------------------~~--~- 246 (438)
T PRK10133 230 K-FPA---------LQS-D-----------------NHSDAK--------------------------------QG--S- 246 (438)
T ss_pred c-CCC---------CCc-c-----------------cccccc--------------------------------cc--c-
Confidence 0 000 000 0 000000 00 0
Q ss_pred CCCCCCHHHHhhcHHHHHHHHHHHhhhcchhheecchHHH-HH-HhCCCcch--hHHHHHHHhhhhhcccccchhhhhhh
Q 007654 348 RGEDFTLTQALIKADFWLIFFSLLLGSGSGLTVIDNLGQM-SQ-SLGYDNTH--IFVSMISIWNFLGRVGGGYFSEIIVR 423 (594)
Q Consensus 348 ~~~d~t~~e~l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i-~~-~~g~~~~~--~~Vsl~si~n~~GRl~~G~lsD~l~r 423 (594)
.-.+.++.+|+++||...+..++..+.-....+-..+. .+ ..|.++.. ...+.+.++..+||+..|++.||+++
T Consensus 247 --~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~ 324 (438)
T PRK10133 247 --FSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAP 324 (438)
T ss_pred --hhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCH
Confidence 00123567899999987766655543322222223333 34 35777653 47899999999999999999999988
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHH
Q 007654 424 DYAYPRPVAMAVAQFVMAIGHIFLGMGWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLV 503 (594)
Q Consensus 424 ~~~~~r~~~l~~~~~~~~~~~ll~~~~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~ 503 (594)
++.. .....+.++++++....+....+....+.|++.|..+...-+...|.++ |+-++-=+++.... +|+.
T Consensus 325 ~~~l------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~glg~~~i~P~~~s~a~~~~~-~~~~~as~l~~~~~-~g~~- 395 (438)
T PRK10133 325 HKVL------AAYALIAMALCLISAFAGGHVGLIALTLCSAFMSIQYPTIFSLGIKNLG-QDTKYGSSFIVMTI-IGGG- 395 (438)
T ss_pred HHHH------HHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHcccc-hhhccchhHHhHHh-ccch-
Confidence 5432 2222222223322222221123456788999999999999999999998 55666666665433 4555
Q ss_pred HHHHHHHHHHHhhh
Q 007654 504 FSGLIASYIYDHEA 517 (594)
Q Consensus 504 ~~~~l~G~iyd~~~ 517 (594)
+.|.+.|.+.|..|
T Consensus 396 ~~~~i~G~l~~~~g 409 (438)
T PRK10133 396 IVTPVMGFVSDAAG 409 (438)
T ss_pred HHHHHHHHHHHhcc
Confidence 36789999999764
No 63
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.56 E-value=2.3e-12 Score=138.04 Aligned_cols=139 Identities=15% Similarity=0.076 Sum_probs=99.0
Q ss_pred hhHHHHHHHHHHHHhcCcccccccccHHHHhhhCCChhhHHHHHHHHhhhhhc-ccchhhhhchhhhHHHHHHHHHHHHH
Q 007654 14 NRWLVFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFI 92 (594)
Q Consensus 14 ~Rw~~l~a~~~i~l~~Gt~Y~fS~ys~~Lk~~lg~sq~~l~~i~~a~~~G~~~-gi~~G~l~D~~gp~~~l~iG~~~~~~ 92 (594)
||.+. +.-..+.....+.+.+..+-|++++++|+|..+.+++.....++..+ .++.|.+.||+|+|..+.+|.+...+
T Consensus 2 ~~~~~-~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i 80 (392)
T PRK10473 2 SRFLL-CSFALVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFII 80 (392)
T ss_pred chHHH-HHHHHHHHHHHHHHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHH
Confidence 45443 23333333344445555889999999999999999876666666655 68899999999999999999988877
Q ss_pred HHHHHHHHHhcCCCChhHHHHHHHHHhhccccchhhhhHHHHHHHhcC-CCCCceehhhHhhhhhhHHH
Q 007654 93 GYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAI 160 (594)
Q Consensus 93 Gy~~~~l~~~g~i~~~s~~~l~~~~~l~g~G~~~~~taal~t~~k~FP-~~RG~~~Gl~~a~~GLSa~i 160 (594)
++.+.... ++++.+....++.|.+.+..+........+++| ++|+++.|+.-+...+++.+
T Consensus 81 ~~~~~~~~-------~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~ 142 (392)
T PRK10473 81 ASLLCSLA-------ETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVL 142 (392)
T ss_pred HHHHHHHh-------CcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH
Confidence 77764322 135555555556667777777777777788897 67999988877666555443
No 64
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.56 E-value=1.5e-12 Score=139.52 Aligned_cols=140 Identities=11% Similarity=-0.015 Sum_probs=90.2
Q ss_pred hcchhHHHHHHHHHHHHhcCcccccccccHHHHhhhCCChhhHHHHHHHHhhhhh-cccchhhhhchhhhHHHHHHHHHH
Q 007654 11 FFNNRWLVFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDS-VGFLAGSLCEVLPIWGALLVGALQ 89 (594)
Q Consensus 11 ~~~~Rw~~l~a~~~i~l~~Gt~Y~fS~ys~~Lk~~lg~sq~~l~~i~~a~~~G~~-~gi~~G~l~D~~gp~~~l~iG~~~ 89 (594)
.+..||+.+...+.. +..-..+.+...-|++.+++|+|..++..+..+..++.. ..++.|.+.||+|+|.++.++.++
T Consensus 4 ~~~~~~l~~~~~~~~-~~~~~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~ 82 (394)
T PRK11652 4 QRNVNLLFMLVLLVA-VGQMAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSI 82 (394)
T ss_pred hhhHHHHHHHHHHHH-HHHHHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHH
Confidence 334455443333322 222333444455578899999999999998666666664 478899999999999999999888
Q ss_pred HHHHHHHHHHHHhcCCCChhHHHHHHHHHhhccccchhhhhHHHHHHHhcC-CCCCceehhhHhhhhhhH
Q 007654 90 NFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGG 158 (594)
Q Consensus 90 ~~~Gy~~~~l~~~g~i~~~s~~~l~~~~~l~g~G~~~~~taal~t~~k~FP-~~RG~~~Gl~~a~~GLSa 158 (594)
..++....... ++++.+.+.-++.|.+.+.....+.....+.+| ++|+.+.++...+..++.
T Consensus 83 ~~~~~~~~~~~-------~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (394)
T PRK11652 83 FILGTLVALFA-------HSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSP 145 (394)
T ss_pred HHHHHHHHHHH-------ccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 77776654321 246666666666666666555544444556677 467776666544444443
No 65
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.55 E-value=2.4e-12 Score=143.26 Aligned_cols=183 Identities=14% Similarity=0.173 Sum_probs=114.6
Q ss_pred HHHHhhcHHHHHHHHHHHhhhcchhheecchHHHH-HHhCCCcchh--HHH-HHHHhhhhhcccccchhhhhhhccCCch
Q 007654 354 LTQALIKADFWLIFFSLLLGSGSGLTVIDNLGQMS-QSLGYDNTHI--FVS-MISIWNFLGRVGGGYFSEIIVRDYAYPR 429 (594)
Q Consensus 354 ~~e~l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~-~~~g~~~~~~--~Vs-l~si~n~~GRl~~G~lsD~l~r~~~~~r 429 (594)
+++.++++++|.+....++.........+...+.. +..|++..+. ..+ +..++..+|.+++|+++||+++++.
T Consensus 215 l~~~~~~~~~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~--- 291 (491)
T PRK11010 215 LRDFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRA--- 291 (491)
T ss_pred HHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH---
Confidence 45667778888665554333222222223344554 4578887654 333 4457899999999999999988542
Q ss_pred hHHHH-HHHHHHHHHHHHHhcc-Cc-hhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHH
Q 007654 430 PVAMA-VAQFVMAIGHIFLGMG-WP-GAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSG 506 (594)
Q Consensus 430 ~~~l~-~~~~~~~~~~ll~~~~-~~-~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~ 506 (594)
..+. +...+..+..+++... .+ ..+.....+..+++|..++.+.++..++...+.-++.||+......+|..+ .+
T Consensus 292 -l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~-~~ 369 (491)
T PRK11010 292 -LMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVY-VG 369 (491)
T ss_pred -HHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHH-HH
Confidence 1211 1112222222222222 22 223444555455555555555666667777667788899988888888875 56
Q ss_pred HHHHHHHHhhhhcccCcccccccccccccCCCCCCCCCccccCcccHHHHHHHHHHHHHHHHHHHHHHh
Q 007654 507 LIASYIYDHEAEKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTSMIMSGLCIVAVILSMILVH 575 (594)
Q Consensus 507 ~l~G~iyd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~~l~~ 575 (594)
.+.|.++|..| |+..|.+.+.+++++++++..++.
T Consensus 370 ~~~G~l~~~~G----------------------------------~~~~f~~~~~~~l~~l~~~~~~~~ 404 (491)
T PRK11010 370 PVAGWFVEAHG----------------------------------WPTFYLFSVAAAVPGLLLLLVCRQ 404 (491)
T ss_pred HHHHHHHHHhC----------------------------------hHHHHHHHHHHHHHHHHHHHHHHh
Confidence 78999999764 899999999999999888877643
No 66
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.53 E-value=2.8e-12 Score=137.51 Aligned_cols=157 Identities=8% Similarity=-0.037 Sum_probs=112.5
Q ss_pred CHHHHhhcHHHHHHHHHHHhhhcchhheecchHHHHHHhCCCcchh--HHHHHHHhhhhhcccccchhhhhhhccCCchh
Q 007654 353 TLTQALIKADFWLIFFSLLLGSGSGLTVIDNLGQMSQSLGYDNTHI--FVSMISIWNFLGRVGGGYFSEIIVRDYAYPRP 430 (594)
Q Consensus 353 t~~e~l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~~~g~~~~~~--~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~ 430 (594)
+.++.+|+++||.+.+..++..++-..+.+...+..++.|.+.... ..++..+...++.+.+|.+.||+++++
T Consensus 197 ~~~~~l~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~----- 271 (382)
T TIGR00902 197 AFIALLKNPMNLRFLAAVCLIQGAHAAYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARD----- 271 (382)
T ss_pred hHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHH-----
Confidence 3568899999999988888877776677777788888888877533 445566666666666666666554422
Q ss_pred HHHHHHHHHHHHHHHHHhc-cCchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHH-hhhhHHHHHHHHHH
Q 007654 431 VAMAVAQFVMAIGHIFLGM-GWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLT-LANPAGSLVFSGLI 508 (594)
Q Consensus 431 ~~l~~~~~~~~~~~ll~~~-~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~-~a~~~g~~~~~~~l 508 (594)
.+.+..++..+..++... .+...++....+-|+++|..+......+.+. ..++.++-.++.. ++.++|.. ++|.+
T Consensus 272 -~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~-~g~~~ 348 (382)
T TIGR00902 272 -LLLISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIA-IFTAF 348 (382)
T ss_pred -HHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHH-HHHHH
Confidence 234445555555444433 3344577788999999999999999999988 6667777777754 46778877 58999
Q ss_pred HHHHHHhhh
Q 007654 509 ASYIYDHEA 517 (594)
Q Consensus 509 ~G~iyd~~~ 517 (594)
.|.++|+.+
T Consensus 349 ~G~l~~~~g 357 (382)
T TIGR00902 349 AGFIYPTLG 357 (382)
T ss_pred HHHHHHhcc
Confidence 999999874
No 67
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.53 E-value=5e-12 Score=135.84 Aligned_cols=179 Identities=11% Similarity=0.106 Sum_probs=117.2
Q ss_pred CHHHHhhcHHHHHHHHHHHhhhcchhheecchHHHHHHh----CCCcc--hhHHHHHHHhhhhhcccccchhhhhhhccC
Q 007654 353 TLTQALIKADFWLIFFSLLLGSGSGLTVIDNLGQMSQSL----GYDNT--HIFVSMISIWNFLGRVGGGYFSEIIVRDYA 426 (594)
Q Consensus 353 t~~e~l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~~~----g~~~~--~~~Vsl~si~n~~GRl~~G~lsD~l~r~~~ 426 (594)
+.+|.+|++++|.+.+..++....-....+......++. +.+.. ....++..+.+.++.+..|.+.||++||+.
T Consensus 207 ~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~ 286 (396)
T TIGR00882 207 LALELFRQRKFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNA 286 (396)
T ss_pred HHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchh
Confidence 357889999999876654443322112222233333432 22222 235677788899999999999999988543
Q ss_pred CchhHHHHHHHHHHHHHHHHHh-ccCchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhH-HHhhhhHHHHHH
Q 007654 427 YPRPVAMAVAQFVMAIGHIFLG-MGWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNF-LTLANPAGSLVF 504 (594)
Q Consensus 427 ~~r~~~l~~~~~~~~~~~ll~~-~~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~-~~~a~~~g~~~~ 504 (594)
. .+...+.+++..++. ..++..+++...+-|++++......-..+.+.++.|.-++.++. ......+|+. +
T Consensus 287 l------~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~-~ 359 (396)
T TIGR00882 287 L------LIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMI-F 359 (396)
T ss_pred H------HHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHH-H
Confidence 2 333333444433322 33444566667777887766655555667788888887777766 3456677887 5
Q ss_pred HHHHHHHHHHhhhhcccCcccccccccccccCCCCCCCCCccccCcccHHHHHHHHHHHHHHHHHHHH
Q 007654 505 SGLIASYIYDHEAEKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTSMIMSGLCIVAVILSMI 572 (594)
Q Consensus 505 ~~~l~G~iyd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~~ 572 (594)
++.+.|.++|..| |+.+|.+.+.+.++..+.+..
T Consensus 360 ~~~l~G~l~~~~G----------------------------------~~~~f~~~~~~~~i~~~~~~~ 393 (396)
T TIGR00882 360 LSTLAGNMYDSIG----------------------------------FQGAYLVLGCIVLLFTLISVF 393 (396)
T ss_pred HHHhHHHHHHhcc----------------------------------cHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999875 899999998888877776654
No 68
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.52 E-value=2e-12 Score=137.13 Aligned_cols=125 Identities=12% Similarity=0.088 Sum_probs=95.4
Q ss_pred cccccccHHHHhhhCCChhhHHHHHHHHhhhhhc-ccchhhhhchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHH
Q 007654 33 YLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLW 111 (594)
Q Consensus 33 Y~fS~ys~~Lk~~lg~sq~~l~~i~~a~~~G~~~-gi~~G~l~D~~gp~~~l~iG~~~~~~Gy~~~~l~~~g~i~~~s~~ 111 (594)
..|.-.-|++.+++|+|.+|++.+..+..++..+ .++.|.+.||+|+|.++.++.++..++..++... .+++
T Consensus 8 ~~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~-------~~~~ 80 (377)
T PRK11102 8 DMYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALA-------QTID 80 (377)
T ss_pred HHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHH-------ccHH
Confidence 4556677888899999999999986666676644 7899999999999999999998877777765432 1356
Q ss_pred HHHHHHHhhccccchhhhhHHHHHHHhcCC-CCCceehhhHhhhhhhHHHHHHH
Q 007654 112 AMCILIFVGNNGETYFNTAALVSCVQNFPK-SRGPVVGILKGFAGLGGAILTQV 164 (594)
Q Consensus 112 ~l~~~~~l~g~G~~~~~taal~t~~k~FP~-~RG~~~Gl~~a~~GLSa~i~s~i 164 (594)
.+.+..++.|.+.+..+........+++|+ +||++.|+.-.+.+++..+-..+
T Consensus 81 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 134 (377)
T PRK11102 81 QLIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPII 134 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666666666777777777777777888984 59999999888777776554433
No 69
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.52 E-value=1.3e-11 Score=132.89 Aligned_cols=150 Identities=13% Similarity=0.080 Sum_probs=100.9
Q ss_pred cchHHHHH-HhCCCcch--hHHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHH-hccCchhHHH
Q 007654 382 DNLGQMSQ-SLGYDNTH--IFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFL-GMGWPGAMYV 457 (594)
Q Consensus 382 ~n~~~i~~-~~g~~~~~--~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~-~~~~~~~l~~ 457 (594)
.......+ ..+++... ...++..+...++++++|+++||++||+.. . .......+..... ...++..+.+
T Consensus 237 ~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~----~--~~~~~~~~~~~~~~~~~~~~~~l~ 310 (393)
T PRK15011 237 INMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLM----R--VAAVAGVCFYAGMLMAHSPAILLG 310 (393)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHH----H--HHHHHHHHHHHHHHHHhhHHHHHH
Confidence 34444554 46777643 355666777888999999999999885421 1 1111111111111 1233334445
Q ss_pred HHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHHhhhhcccCcccccccccccccCC
Q 007654 458 GTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYDHEAEKQHQPHHHLLNAGSIFTSM 537 (594)
Q Consensus 458 ~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~~~~~~~~~~~~~~~~~~~~~~ 537 (594)
...+.++++|...+..+....|.+. ++-|+..++......+|.. ++|.+.|.++|+.+
T Consensus 311 ~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~~~~~~~~~~~lg~~-~g~~l~G~i~~~~g-------------------- 368 (393)
T PRK15011 311 LQLLNAIYIGILGGIGMLYFQDLMP-GQAGSATTLYTNTSRVGWI-IAGSLAGIVAEIWN-------------------- 368 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCC-CCcchHHHHHHHHHHHHHH-HHHHHHHHHHHHhh--------------------
Confidence 5566677888888888888999996 5689888887777777777 58999999999764
Q ss_pred CCCCCCCccccCcccHHHHHHHHHHHHHHHHHHHHH
Q 007654 538 PRVDEPLKCEGSICYFLTSMIMSGLCIVAVILSMIL 573 (594)
Q Consensus 538 ~~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~~l 573 (594)
|+..|.+...++++++++.+.+
T Consensus 369 --------------~~~~~~~~~~~~~~~~~~~~~~ 390 (393)
T PRK15011 369 --------------YHAVFWFALVMIIATLFCLLRI 390 (393)
T ss_pred --------------hHHHHHHHHHHHHHHHHHHHhh
Confidence 8889988887777766665543
No 70
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.49 E-value=4.6e-12 Score=154.19 Aligned_cols=159 Identities=14% Similarity=0.086 Sum_probs=114.9
Q ss_pred HHHHhhcHHHHHHHHHHHhhhcchhheecchHHHHHH-hCCCcc--hhHHHHHHHhhhhhcccccchhhhhhhccCCchh
Q 007654 354 LTQALIKADFWLIFFSLLLGSGSGLTVIDNLGQMSQS-LGYDNT--HIFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRP 430 (594)
Q Consensus 354 ~~e~l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~~-~g~~~~--~~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~ 430 (594)
++++.+++.+|.+.+.+++....+.++...+..+.++ +|.+.. ....+.++++..+|.++.|+++|+..+++..+..
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~ 297 (1140)
T PRK06814 218 LKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIG 297 (1140)
T ss_pred HHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHH
Confidence 4667899999999998887777766666777777776 577654 3477899999999999999999876554332211
Q ss_pred HHHHHHHHHHHHHHHHH-----------------h-ccCchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhH
Q 007654 431 VAMAVAQFVMAIGHIFL-----------------G-MGWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNF 492 (594)
Q Consensus 431 ~~l~~~~~~~~~~~ll~-----------------~-~~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~ 492 (594)
. +...+..+.+.+. . ..+...+++..+++|++.|......++++.+.+..++.|+.+|+
T Consensus 298 ~---~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~ 374 (1140)
T PRK06814 298 A---LLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAA 374 (1140)
T ss_pred H---HHHHHHHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHH
Confidence 1 1111111111010 0 02333566778889999999999999999999999999999999
Q ss_pred HHhhhhHHHHHHHHHHHHHHHHhh
Q 007654 493 LTLANPAGSLVFSGLIASYIYDHE 516 (594)
Q Consensus 493 ~~~a~~~g~~~~~~~l~G~iyd~~ 516 (594)
..+...++.. +++.+.|.++|..
T Consensus 375 ~~~~~~~~~~-ig~~~~g~l~~~~ 397 (1140)
T PRK06814 375 NNVLNAAFMV-AGTIILALLQALG 397 (1140)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHhc
Confidence 9988888776 5888999998744
No 71
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.47 E-value=1.3e-11 Score=149.80 Aligned_cols=342 Identities=14% Similarity=0.053 Sum_probs=198.3
Q ss_pred ccccHHHHhhhCCChhh--HHHHHHHHhhhh-hcccchhhhhchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHH
Q 007654 36 GSISPVIKSSLNYNQKQ--IARLGVAKDLGD-SVGFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWA 112 (594)
Q Consensus 36 S~ys~~Lk~~lg~sq~~--l~~i~~a~~~G~-~~gi~~G~l~D~~gp~~~l~iG~~~~~~Gy~~~~l~~~g~i~~~s~~~ 112 (594)
.+..+.+...++.++++ ..++..+..++. .+++++|.+.||+|+|.++.++.++..++..+..++..- .++|.
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~----~~~~~ 105 (1146)
T PRK08633 30 ILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYL----GWFWL 105 (1146)
T ss_pred HHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHH----ccHHH
Confidence 44455666667776654 344555555555 457899999999999999888876655554443322211 13677
Q ss_pred HHHHHHhhccccchhhhhHHHHHHHhcC-CCCCceehhhHhhhhhhHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHhh
Q 007654 113 MCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIHAPDHANLIFMVAVGPAMVVIAL 191 (594)
Q Consensus 113 l~~~~~l~g~G~~~~~taal~t~~k~FP-~~RG~~~Gl~~a~~GLSa~i~s~i~~~~f~~~~~~fll~la~~~~~v~l~~ 191 (594)
+.+..++.|.+.++..++......+++| ++||.+.|+.-....+|..+-..+...+.
T Consensus 106 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~---------------------- 163 (1146)
T PRK08633 106 AFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLF---------------------- 163 (1146)
T ss_pred HHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHH----------------------
Confidence 7777777778888888888888889997 56999999988887777644433332110
Q ss_pred heeecccCCCCcCCCCC-CCchhHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHhhhcchhhhhhcccccC
Q 007654 192 MFIIRPVGGHRQVRPSD-SSSFTFIYSVCLLLAAYLMGVMLVEDLVDLNHTVIIIFTVILFVLLFIPIVIPIILSFFLER 270 (594)
Q Consensus 192 ~~~ir~~~~~~~~~~~~-~~~f~~~~~~~~~l~~~l~~~~~~~~~~~~s~~~~~~~~~i~~~ll~~~~~~~~~~~~~~~~ 270 (594)
..+. +. .+++ ...+.......+ ...++.+ ++. . ..++.
T Consensus 164 ~~~~---~~----~~~~~~~~~~~~~~~~~------------------------~~~~~~~--~~~-------~-~~~~~ 202 (1146)
T PRK08633 164 ESVN---GN----TPSEILGRIAPAGLVLL------------------------AVAVLGL--IFA-------Y-RLPKV 202 (1146)
T ss_pred Hhhc---cc----cccccccchHHHHHHHH------------------------HHHHHHH--HHH-------h-cCcCC
Confidence 0000 00 0000 000111000000 0000000 000 0 00000
Q ss_pred CChhhhhhcCCCCCCCCCCCCCcchhhhhcccccCCCCccCCCchhHHHHHHHHHHHHHHhhhhhhhhhhhccCCCCCCC
Q 007654 271 TDPAEEALLSKPENMEPGKSNQETDEVILSEVEDEKPKDVDLLPASERRKRIAQLQARLFHAAAEGAVRVKRRRGPHRGE 350 (594)
Q Consensus 271 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 350 (594)
++ ..... +++. ... .. . . .
T Consensus 203 ~~-----------~~~~~---------------~~~~-~~~----~~-~---------------------~--------~ 221 (1146)
T PRK08633 203 PA-----------AAPEV---------------FDKK-KYL----FP-K---------------------L--------L 221 (1146)
T ss_pred CC-----------CCccc---------------cccc-ccc----cH-H---------------------H--------H
Confidence 00 00000 0000 000 00 0 0 0
Q ss_pred CCCHHHHhhcHHHHHHHHHHHhhhcchhheecchHHHHHH-hCCCcc-h--hHHHHHHHhhhhhcccccchhhhhhhccC
Q 007654 351 DFTLTQALIKADFWLIFFSLLLGSGSGLTVIDNLGQMSQS-LGYDNT-H--IFVSMISIWNFLGRVGGGYFSEIIVRDYA 426 (594)
Q Consensus 351 d~t~~e~l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~~-~g~~~~-~--~~Vsl~si~n~~GRl~~G~lsD~l~r~~~ 426 (594)
...+++.++++.+|.+.+.+++.......+...+.+..++ +|.+.. . ...++..++..+|.+++|+++||.++++.
T Consensus 222 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~ 301 (1146)
T PRK08633 222 WRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGL 301 (1146)
T ss_pred HHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccc
Confidence 0124567888999988877777666655555666666654 677655 3 36678888999999999999998876443
Q ss_pred CchhHHHHHHHHHHHHHHHHHhc-cCchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHH
Q 007654 427 YPRPVAMAVAQFVMAIGHIFLGM-GWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFS 505 (594)
Q Consensus 427 ~~r~~~l~~~~~~~~~~~ll~~~-~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~ 505 (594)
. .+..++++++.+++.. .+...+.+..++.|+++|........++.+.+..++-|+.+++..+...+|.. ++
T Consensus 302 ~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~-~~ 374 (1146)
T PRK08633 302 V------PLGALGLALSLFLLPTAPSLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGML-LF 374 (1146)
T ss_pred h------hHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHH-HH
Confidence 2 2223333333333332 23345667788889999999988999999999999999999998877777775 35
Q ss_pred HHHHHHH
Q 007654 506 GLIASYI 512 (594)
Q Consensus 506 ~~l~G~i 512 (594)
+.+.+.+
T Consensus 375 ~~~~~~l 381 (1146)
T PRK08633 375 LALTTLF 381 (1146)
T ss_pred HHHHHHH
Confidence 5444433
No 72
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.46 E-value=2.4e-11 Score=131.08 Aligned_cols=116 Identities=12% Similarity=0.015 Sum_probs=81.0
Q ss_pred HHhhhCCChhhHHHHHHHHhhhhhcccchhhhhchh-----hhH-HHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHH
Q 007654 42 IKSSLNYNQKQIARLGVAKDLGDSVGFLAGSLCEVL-----PIW-GALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCI 115 (594)
Q Consensus 42 Lk~~lg~sq~~l~~i~~a~~~G~~~gi~~G~l~D~~-----gp~-~~l~iG~~~~~~Gy~~~~l~~~g~i~~~s~~~l~~ 115 (594)
|++ .|+|-+|+..+...... -.+.++.|.+.||+ |+| ..+.++.+...+...++. +.. +..++|.+..
T Consensus 26 l~~-~g~~~~~ig~~~~~~~~-~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~--~~~--~~~~~~~l~~ 99 (402)
T PRK11902 26 MTV-EGLDIQTIGFFSLVGQA-YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMA--FCP--PHAALWPLAG 99 (402)
T ss_pred HHH-cCCCHHHHHHHHHHHHH-HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHH--hcC--ccchHHHHHH
Confidence 454 59999999998665555 46789999999999 554 456666665545555432 222 1235777665
Q ss_pred HHHhhccccchhhhhHHHHHHHhcCCC-CCceehhhHhhhhhhHHHHHH
Q 007654 116 LIFVGNNGETYFNTAALVSCVQNFPKS-RGPVVGILKGFAGLGGAILTQ 163 (594)
Q Consensus 116 ~~~l~g~G~~~~~taal~t~~k~FP~~-RG~~~Gl~~a~~GLSa~i~s~ 163 (594)
+.++.+...+..+.+.-....+++|++ ||++.++...+++++..+-..
T Consensus 100 ~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~ 148 (402)
T PRK11902 100 LAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGG 148 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhH
Confidence 555555566677777778888999865 999999998888887655543
No 73
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.45 E-value=5.2e-11 Score=127.53 Aligned_cols=157 Identities=11% Similarity=0.040 Sum_probs=101.9
Q ss_pred CHHHHhhcHHHHHHHHHHHhhhcchhheecchHHHHHHhCCCcch--hHHHHHHHhhhhhcccccchhhhhhhccCCchh
Q 007654 353 TLTQALIKADFWLIFFSLLLGSGSGLTVIDNLGQMSQSLGYDNTH--IFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRP 430 (594)
Q Consensus 353 t~~e~l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~~~g~~~~~--~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~ 430 (594)
+.++.+|++.||.+.+..++....-..+.+...+..++.|.+... ...++..+.+..+++..|.+.||+++++.
T Consensus 197 ~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~---- 272 (382)
T PRK11128 197 AWKALLKEPTVWRFLLCVSLLQGSHAAYYGFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDL---- 272 (382)
T ss_pred hHHHHHcChhHHHHHHHHHHHHHHhHhHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH----
Confidence 467899999999887766655444334445556666778877643 35566667777778888888877766332
Q ss_pred HHHHHHHHHHHHHHHHHh-ccCchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHH-hhhhHHHHHHHHHH
Q 007654 431 VAMAVAQFVMAIGHIFLG-MGWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLT-LANPAGSLVFSGLI 508 (594)
Q Consensus 431 ~~l~~~~~~~~~~~ll~~-~~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~-~a~~~g~~~~~~~l 508 (594)
+.+...+..++.+++. ..++..+++..++.|+++|......-..+.+.- ..+.++.++... ....+|.. ++|.+
T Consensus 273 --l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~-ig~~i 348 (382)
T PRK11128 273 --LLLSAICGVVRWGLMGSTTALPWLIVIQILHCGTFTVCHLAAMRYIAARP-GSEVIRLQALYSALAMGGSIA-IMTVL 348 (382)
T ss_pred --HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-HhhhHHHHHHHHHHHHHHHHH-HHHHH
Confidence 2334444444443333 233445667788888888876555555555553 345677777664 44455655 58999
Q ss_pred HHHHHHhhh
Q 007654 509 ASYIYDHEA 517 (594)
Q Consensus 509 ~G~iyd~~~ 517 (594)
+|.++|+.+
T Consensus 349 ~G~l~~~~g 357 (382)
T PRK11128 349 SGFLYQHLG 357 (382)
T ss_pred HHHHHHhcc
Confidence 999999875
No 74
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.42 E-value=9.1e-12 Score=137.40 Aligned_cols=367 Identities=14% Similarity=0.191 Sum_probs=229.0
Q ss_pred HhhhCCChhhHHHHHHHHhhhhhc-ccchhhhhchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHhhc
Q 007654 43 KSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGN 121 (594)
Q Consensus 43 k~~lg~sq~~l~~i~~a~~~G~~~-gi~~G~l~D~~gp~~~l~iG~~~~~~Gy~~~~l~~~g~i~~~s~~~l~~~~~l~g 121 (594)
+.+++||.+|-+++=.+...|... -+|+|.++||+|.|.++..+.++..++..++=++..- ++|.+++.=++.|
T Consensus 65 ~~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~-----~~~~~~~~R~lqG 139 (466)
T KOG2532|consen 65 AGEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASI-----GFYLLLVLRFLQG 139 (466)
T ss_pred CceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHh-----cchhhHHHHHHhH
Confidence 568999999999998888888876 5678999999999999999999988888876444322 2444455667778
Q ss_pred cccchhhhhHHHHHHHhcC-CCCCceehhhHhhhhhhHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHhhheeecccCC
Q 007654 122 NGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIHAPDHANLIFMVAVGPAMVVIALMFIIRPVGG 200 (594)
Q Consensus 122 ~G~~~~~taal~t~~k~FP-~~RG~~~Gl~~a~~GLSa~i~s~i~~~~f~~~~~~fll~la~~~~~v~l~~~~~ir~~~~ 200 (594)
.+.+..+++.-.-..||+| ++|++..+++.++.-+|..+--++.... +
T Consensus 140 l~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~l----------------------c--------- 188 (466)
T KOG2532|consen 140 LGQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLL----------------------C--------- 188 (466)
T ss_pred HHHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHH----------------------h---------
Confidence 8888888888888999997 6899999999999877765554333211 1
Q ss_pred CCcCCCCCCCchhHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHhhhcchhhhhhcccccCCChhhhhhcC
Q 007654 201 HRQVRPSDSSSFTFIYSVCLLLAAYLMGVMLVEDLVDLNHTVIIIFTVILFVLLFIPIVIPIILSFFLERTDPAEEALLS 280 (594)
Q Consensus 201 ~~~~~~~~~~~f~~~~~~~~~l~~~l~~~~~~~~~~~~s~~~~~~~~~i~~~ll~~~~~~~~~~~~~~~~~~~~~~~~l~ 280 (594)
+...+.+..++ ..+++-++.... |.- +..
T Consensus 189 --------------------------------~s~~GW~sifY-~~g~~g~i~~~~---------w~~---------~~~ 217 (466)
T KOG2532|consen 189 --------------------------------ESSLGWPSIFY-VFGIVGLIWFIL---------WFL---------FYS 217 (466)
T ss_pred --------------------------------ccCCCCchHHH-HHHHHHHHHHHH---------HHH---------Hhc
Confidence 11123333332 111111111111 000 000
Q ss_pred CCCCCCCCCCCCcchhhhhcccccCCCCccCCCchhHHHHHHHHHHHHHHhhhhhhhhhhhccCCCCCCCCCCHHHHhhc
Q 007654 281 KPENMEPGKSNQETDEVILSEVEDEKPKDVDLLPASERRKRIAQLQARLFHAAAEGAVRVKRRRGPHRGEDFTLTQALIK 360 (594)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~d~t~~e~l~t 360 (594)
|.|+++...+++| +..+++.+ .++..++..+..+++++++
T Consensus 218 d~P~~h~~is~~E-----l~~I~~~k-----------------------------------~~~~~~~~~~vP~~~i~ts 257 (466)
T KOG2532|consen 218 DSPSKHPNISEKE-----LKYIEKGK-----------------------------------SEAHVKKKPPVPYKAILTS 257 (466)
T ss_pred CCcccCCCCCHHH-----HHHHHhcc-----------------------------------cccccCCCCCCCHHHHHcC
Confidence 1111111100000 00000000 0000111136778999999
Q ss_pred HHHHHHHHHHHhhhcchhheecchHHHHHH-hCCCcc--hhHHHHHHHhhhhhcccccchhhhhhhccCCc----hhHHH
Q 007654 361 ADFWLIFFSLLLGSGSGLTVIDNLGQMSQS-LGYDNT--HIFVSMISIWNFLGRVGGGYFSEIIVRDYAYP----RPVAM 433 (594)
Q Consensus 361 ~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~~-~g~~~~--~~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~----r~~~l 433 (594)
+.+|.+|+..++..-.=..++.....-.++ ++++.. ..+.++=-+...+-++++|.++||+.+| ..+ |..+-
T Consensus 258 ~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~-~ls~t~~rkifn 336 (466)
T KOG2532|consen 258 PPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFR-ILSETTVRKIFN 336 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCchHhHHHHHH
Confidence 999999999888755544444444444444 687754 3467788899999999999999999885 433 44455
Q ss_pred HHHHHHHHHHHHHHhccC--ch-----hHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHH
Q 007654 434 AVAQFVMAIGHIFLGMGW--PG-----AMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSG 506 (594)
Q Consensus 434 ~~~~~~~~~~~ll~~~~~--~~-----~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~ 506 (594)
.+++...++.++.+...+ .. .+.++..+.|++.++..-. ...-.++|-+...|+......+.++ ++|
T Consensus 337 ~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~~~-----~~~~apq~a~~l~g~~~~~~~~~~~-~~P 410 (466)
T KOG2532|consen 337 TIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGFYKN-----HQDIAPQHAGFVMGIINFVGALAGF-IAP 410 (466)
T ss_pred hHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhhhHhh-----hhhccchHHHHHHHHHHHHHHHHHH-HHH
Confidence 566666665554443322 21 2333334444444443322 2222678889999999888888887 589
Q ss_pred HHHHHHHHhhhhcccCcccccccccccccCCCCCCCCCccccCcccHHHHHHHHHHHHHHHHHHHHHH
Q 007654 507 LIASYIYDHEAEKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTSMIMSGLCIVAVILSMILV 574 (594)
Q Consensus 507 ~l~G~iyd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~~l~ 574 (594)
.+.|.+-. +... +-.+..|++.+++.+++.+.-.+..
T Consensus 411 ~~vg~~~~-~~t~------------------------------~eW~~VF~i~a~i~~~~~i~f~~f~ 447 (466)
T KOG2532|consen 411 LLVGIIVT-DNTR------------------------------EEWRIVFLIAAGILIVGNIIFLFFG 447 (466)
T ss_pred HheeeEeC-CCCH------------------------------HHHHHHHHHHHHHHHHhchheeEee
Confidence 98887773 2111 2499999999999998875555543
No 75
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.42 E-value=9.3e-12 Score=131.42 Aligned_cols=137 Identities=14% Similarity=0.079 Sum_probs=91.9
Q ss_pred HHHhhcHH---HHHHHHHHHhhhcchhheecchHHHHHHhCCCcchh--HHHHHH-HhhhhhcccccchhhhhhhccCCc
Q 007654 355 TQALIKAD---FWLIFFSLLLGSGSGLTVIDNLGQMSQSLGYDNTHI--FVSMIS-IWNFLGRVGGGYFSEIIVRDYAYP 428 (594)
Q Consensus 355 ~e~l~t~~---Fwll~~~~~~~~g~Gl~vi~n~~~i~~~~g~~~~~~--~Vsl~s-i~n~~GRl~~G~lsD~l~r~~~~~ 428 (594)
++.++++. +|.+.+..++...+...+.....+..+++|.++.+. ..++.+ +...+|.+++|+++||++|++..
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l- 278 (356)
T TIGR00901 200 REFFQRKNMIQALLLLLLIVLYKLGDSAATVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYAL- 278 (356)
T ss_pred HHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHH-
Confidence 45556654 777766655554444445566777777888877653 344444 57789999999999999885542
Q ss_pred hhHHHHHHHHHHHHHHHHH--h-cc---------CchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhh
Q 007654 429 RPVAMAVAQFVMAIGHIFL--G-MG---------WPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLA 496 (594)
Q Consensus 429 r~~~l~~~~~~~~~~~ll~--~-~~---------~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a 496 (594)
....++..++..++ . .. ....+....++.++++|..+.....++.|.+-.++-|+.+|+....
T Consensus 279 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~ 353 (356)
T TIGR00901 279 -----LLFGIVQALTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSL 353 (356)
T ss_pred -----HHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHH
Confidence 22222223332221 1 11 1223555566779999999999999999999999999999998765
Q ss_pred h
Q 007654 497 N 497 (594)
Q Consensus 497 ~ 497 (594)
.
T Consensus 354 ~ 354 (356)
T TIGR00901 354 S 354 (356)
T ss_pred H
Confidence 4
No 76
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.40 E-value=4.3e-10 Score=120.56 Aligned_cols=374 Identities=15% Similarity=0.174 Sum_probs=243.4
Q ss_pred hhHHHHHHHHHHHHhcCcc-cccccccHHHHhhhCCChhhHHH-HHHHHhhhhhcccchhhhhchhhhHHHHHHHHHHHH
Q 007654 14 NRWLVFVAAMWIQSCAGIG-YLFGSISPVIKSSLNYNQKQIAR-LGVAKDLGDSVGFLAGSLCEVLPIWGALLVGALQNF 91 (594)
Q Consensus 14 ~Rw~~l~a~~~i~l~~Gt~-Y~fS~ys~~Lk~~lg~sq~~l~~-i~~a~~~G~~~gi~~G~l~D~~gp~~~l~iG~~~~~ 91 (594)
+.|..+.+=.+...+.||. |.-+--=|++.+.+|.|..+... ++...-.....+++-..+.||+.+|.+++...+++.
T Consensus 10 ~~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi 89 (394)
T COG2814 10 PMWLALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFI 89 (394)
T ss_pred cchHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHH
Confidence 3354444444455555655 77777789999999999999988 465555555668999999999999999988888887
Q ss_pred HHHHHHHHHHhcCCCChhHHHHHHHHHhhccccchhhhhHHHHHHHhcC-CCCCceehhhHhhhhhhHHHHHHHHHHhcC
Q 007654 92 IGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIHA 170 (594)
Q Consensus 92 ~Gy~~~~l~~~g~i~~~s~~~l~~~~~l~g~G~~~~~taal~t~~k~FP-~~RG~~~Gl~~a~~GLSa~i~s~i~~~~f~ 170 (594)
+|-.+..++ ++++.+.+-=++.|...+.+..-+...+.|-=| +|||.+.|++..+.-++-.+=.++..
T Consensus 90 ~~n~l~alA-------p~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt---- 158 (394)
T COG2814 90 VSNLLSALA-------PSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGT---- 158 (394)
T ss_pred HHHHHHHHh-------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHH----
Confidence 777765443 468888877777778778776677777777775 68999999998776555332222221
Q ss_pred CChHHHHHHHHHHHHHHHHhhheeecccCCCCcCCCCCCCchhHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHH
Q 007654 171 PDHANLIFMVAVGPAMVVIALMFIIRPVGGHRQVRPSDSSSFTFIYSVCLLLAAYLMGVMLVEDLVDLNHTVIIIFTVIL 250 (594)
Q Consensus 171 ~~~~~fll~la~~~~~v~l~~~~~ir~~~~~~~~~~~~~~~f~~~~~~~~~l~~~l~~~~~~~~~~~~s~~~~~~~~~i~ 250 (594)
. +.++.+.-.++.....+.+
T Consensus 159 ------------------~------------------------------------------ig~~~GWR~~F~~ia~l~l 178 (394)
T COG2814 159 ------------------F------------------------------------------LGQLFGWRATFLAIAVLAL 178 (394)
T ss_pred ------------------H------------------------------------------HHHHhhHHHHHHHHHHHHH
Confidence 0 1122222222211111111
Q ss_pred HHHhhhcchhhhhhcccccCCChhhhhhcCCCCCCCCCCCCCcchhhhhcccccCCCCccCCCchhHHHHHHHHHHHHHH
Q 007654 251 FVLLFIPIVIPIILSFFLERTDPAEEALLSKPENMEPGKSNQETDEVILSEVEDEKPKDVDLLPASERRKRIAQLQARLF 330 (594)
Q Consensus 251 ~~ll~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (594)
+.++.. + ..++ |++.+ ++++
T Consensus 179 l~~~~~---------~----------~~lP-~~~~~-----------------~~~~----------------------- 198 (394)
T COG2814 179 LALLLL---------W----------KLLP-PSEIS-----------------GSLP----------------------- 198 (394)
T ss_pred HHHHHH---------H----------HhCC-CccCC-----------------CCCC-----------------------
Confidence 111111 0 0011 00000 0000
Q ss_pred hhhhhhhhhhhccCCCCCCCCCCHHHHhhcHHHHHHHHHHHhhhcchhheecchHHHHHHh-CCCcch--hHHHHHHHhh
Q 007654 331 HAAAEGAVRVKRRRGPHRGEDFTLTQALIKADFWLIFFSLLLGSGSGLTVIDNLGQMSQSL-GYDNTH--IFVSMISIWN 407 (594)
Q Consensus 331 ~~~~~~~~~~~~~~~p~~~~d~t~~e~l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~~~-g~~~~~--~~Vsl~si~n 407 (594)
.+-.+..+.+|+|+-|...++.++..+...+...=++|+.++. |.+... ...-+++++.
T Consensus 199 ------------------~~~~~~~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~ 260 (394)
T COG2814 199 ------------------GPLRTLLRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAG 260 (394)
T ss_pred ------------------cchhHHHHHhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHH
Confidence 0011235689999999999999999999999999999999985 666654 3667899999
Q ss_pred hhhcccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHhc--cCchhHHHHHHHHHhhhhhccchhHHHHHHhhccCc
Q 007654 408 FLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLGM--GWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKK 485 (594)
Q Consensus 408 ~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~~--~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~ 485 (594)
.+|-++.|.++|| +.++ .. ....+++.+..+.+.. ..+........+.|+..+........-.++ ...++
T Consensus 261 ~~Gn~~gGrl~dr-~~~~-----~l-~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~ 332 (394)
T COG2814 261 FIGNLLGGRLADR-GPRR-----AL-IAALLLLALALLALTFTGASPALALALLFLWGFAFSPALQGLQTRLAR-LAPDA 332 (394)
T ss_pred HHHHHHHhhhccc-cchh-----HH-HHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhhhhhhHHHHHhcc-cCCCc
Confidence 9999999999998 3322 22 2222333333333322 223344445555677777766777777777 55577
Q ss_pred hhhhhhHHHhhhhHHHHHHHHHHHHHHHHhhhhcccCcccccccccccccCCCCCCCCCccccCcccHHHHHHHHHHHHH
Q 007654 486 FGALYNFLTLANPAGSLVFSGLIASYIYDHEAEKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTSMIMSGLCIV 565 (594)
Q Consensus 486 ~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~ 565 (594)
-..--++...+.-+|-. .|..+.|.++|+.| |..+..+.+.+.++
T Consensus 333 ~~~a~sl~~aa~nlgia-~GA~lGG~v~~~~g----------------------------------~~~~~~~~a~l~~~ 377 (394)
T COG2814 333 ADLAGSLNVAAFNLGIA-LGAALGGLVLDALG----------------------------------YAATGWVGAALLLL 377 (394)
T ss_pred hHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhc----------------------------------hHHHHHHHHHHHHH
Confidence 65555555555555544 46678899999854 89999999999999
Q ss_pred HHHHHHHHHhhhhh
Q 007654 566 AVILSMILVHRTTN 579 (594)
Q Consensus 566 a~~ls~~l~~r~r~ 579 (594)
++++.++..+++||
T Consensus 378 a~~~~~~~~~~~~~ 391 (394)
T COG2814 378 ALLLALLSARKDRR 391 (394)
T ss_pred HHHHHHHHHhcccc
Confidence 99998887776654
No 77
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.32 E-value=8.1e-11 Score=127.48 Aligned_cols=157 Identities=14% Similarity=0.187 Sum_probs=105.6
Q ss_pred HHHHhhcHHHHHHHHHHHhhhcchhheecchHHHH-HH-hCCCcc-hhHHHHHHHhhhhhcccccchhhhhhhccCCchh
Q 007654 354 LTQALIKADFWLIFFSLLLGSGSGLTVIDNLGQMS-QS-LGYDNT-HIFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRP 430 (594)
Q Consensus 354 ~~e~l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~-~~-~g~~~~-~~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~ 430 (594)
+++.++++.||.+.+..++.... ....+...+.. +. ++.+.. ....++..+...++.+++|+++||++||+..
T Consensus 215 ~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~--- 290 (437)
T TIGR00792 215 FKALFKNDQLLILCLAYLFYNLA-FNIKNGVQVYYFTYVLGDPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILF--- 290 (437)
T ss_pred HHHHhCCHHHHHHHHHHHHHHHH-HHHHcchhheeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH---
Confidence 46778999999987766654333 22222222222 21 231111 2355667899999999999999999875432
Q ss_pred HHHHHHHHHHHHHHHHHhc--cCchhHHHHHHHHHhhhhhccchhHHHHHHh-------hccCchhhhhhHHHhhhhHHH
Q 007654 431 VAMAVAQFVMAIGHIFLGM--GWPGAMYVGTLLIGLGYGAHWAIVPAAASEL-------FGLKKFGALYNFLTLANPAGS 501 (594)
Q Consensus 431 ~~l~~~~~~~~~~~ll~~~--~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~-------FG~k~~g~nyg~~~~a~~~g~ 501 (594)
.+...+.+++.+++.. .+...+++..++.|+++|..+....++++|. .|.|+-|..+|+.....-+|.
T Consensus 291 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~ 367 (437)
T TIGR00792 291 ---AGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQ 367 (437)
T ss_pred ---HHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHH
Confidence 2233334444433322 2233456677788999999999999998887 467788999999988888888
Q ss_pred HHHHHHHHHHHHHhhhh
Q 007654 502 LVFSGLIASYIYDHEAE 518 (594)
Q Consensus 502 ~~~~~~l~G~iyd~~~~ 518 (594)
. +++.+.|.+.|..|-
T Consensus 368 ~-lg~~i~g~ll~~~G~ 383 (437)
T TIGR00792 368 A-LAGFLVGLILGIIGY 383 (437)
T ss_pred H-HHHHHHHHHHHHcCC
Confidence 7 589999999998763
No 78
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.30 E-value=5.8e-10 Score=119.58 Aligned_cols=175 Identities=14% Similarity=0.102 Sum_probs=120.7
Q ss_pred HHHHhhcHHHHHHHHHHHhhhcchhheecchHHHHHHhCCCcchh--HHHHHH-HhhhhhcccccchhhhhhhccCCchh
Q 007654 354 LTQALIKADFWLIFFSLLLGSGSGLTVIDNLGQMSQSLGYDNTHI--FVSMIS-IWNFLGRVGGGYFSEIIVRDYAYPRP 430 (594)
Q Consensus 354 ~~e~l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~~~g~~~~~~--~Vsl~s-i~n~~GRl~~G~lsD~l~r~~~~~r~ 430 (594)
.++.+|++.+|.+....++...+-....+...+..++.|++.+++ ..++.+ +...+|.+..|++.||+++++..
T Consensus 201 ~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l--- 277 (390)
T TIGR02718 201 LFRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTF--- 277 (390)
T ss_pred HHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHH---
Confidence 467889999988777666655444444455667788899887654 444554 46778999999999999885432
Q ss_pred HHHHHHHHHHHHH-HHHHh--c----cCchhHHHHHHHHHhhhhhccchhHHHHHHhhcc-CchhhhhhHHHhhhhHHHH
Q 007654 431 VAMAVAQFVMAIG-HIFLG--M----GWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGL-KKFGALYNFLTLANPAGSL 502 (594)
Q Consensus 431 ~~l~~~~~~~~~~-~ll~~--~----~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~-k~~g~nyg~~~~a~~~g~~ 502 (594)
....++..+. .+.+. . ..+..++....+.+++.|..+..+...+.+..+. ++.|+.+++......+|..
T Consensus 278 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~ 354 (390)
T TIGR02718 278 ---ILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGEL 354 (390)
T ss_pred ---HHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHH
Confidence 1111211111 11111 1 1122233344555678888888888888888887 7889999999988899988
Q ss_pred HHHHHHHHHHHHhhhhcccCcccccccccccccCCCCCCCCCccccCcccHHHHHHHHHHHHHHHHH
Q 007654 503 VFSGLIASYIYDHEAEKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTSMIMSGLCIVAVIL 569 (594)
Q Consensus 503 ~~~~~l~G~iyd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~l 569 (594)
++|.+.|.++|..| |+..|.+++++++++.++
T Consensus 355 -~g~~~~G~l~~~~G----------------------------------~~~~f~~~~~~~l~a~~~ 386 (390)
T TIGR02718 355 -IASSIAGYLTDRFG----------------------------------YAGGFLSGTVLAVLAILL 386 (390)
T ss_pred -HHHHHHHHHHHHHc----------------------------------cHHHHHHHHHHHHHHHHH
Confidence 59999999999875 888998888777666544
No 79
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.28 E-value=2.8e-09 Score=113.24 Aligned_cols=367 Identities=16% Similarity=0.154 Sum_probs=228.3
Q ss_pred HHHHHHHHHHHhcCcccccccccHHHHhhhCCChhhHHHHHHHHhhhhh-cccchhhhhchhhhHHHHHHHHHHHHHHHH
Q 007654 17 LVFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDS-VGFLAGSLCEVLPIWGALLVGALQNFIGYG 95 (594)
Q Consensus 17 ~~l~a~~~i~l~~Gt~Y~fS~ys~~Lk~~lg~sq~~l~~i~~a~~~G~~-~gi~~G~l~D~~gp~~~l~iG~~~~~~Gy~ 95 (594)
++++.+++.+-..-+.- =.+--|++|+.+++|+.|..++-.+--.|=. .++|.|++.+|+|.|..+++|..+..+|..
T Consensus 15 ~v~~t~lFfl~G~~~~l-~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~ 93 (422)
T COG0738 15 FVLLTSLFFLWGFITCL-NDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAA 93 (422)
T ss_pred HHHHHHHHHHHHHHhhc-chhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 45555555444333332 2456799999999999999998766555532 388999999999999999999999999999
Q ss_pred HHHHHHhcCCCChhHHHHHHHHHhhccccchhhhhHHHHHHHhcCC-CCCceehhhHhhhhhhHHHHHHHHHHhcCCChH
Q 007654 96 WVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPK-SRGPVVGILKGFAGLGGAILTQVYTMIHAPDHA 174 (594)
Q Consensus 96 ~~~l~~~g~i~~~s~~~l~~~~~l~g~G~~~~~taal~t~~k~FP~-~RG~~~Gl~~a~~GLSa~i~s~i~~~~f~~~~~ 174 (594)
++|=+-..+ ++-..+.-.++-+.|.+...|++-.-.....|. +.-.=..+.-+++|||+.+-..+...+...+
T Consensus 94 lF~pAa~~~----~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~-- 167 (422)
T COG0738 94 LFWPAASSK----SYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSG-- 167 (422)
T ss_pred HHhhhhhhh----hHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhh--
Confidence 988554332 233333444566779999999999999999975 4455568899999999988877665332100
Q ss_pred HHHHHHHHHHHHHHHhhheeecccCCCCcCCCCCCCchhHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHh
Q 007654 175 NLIFMVAVGPAMVVIALMFIIRPVGGHRQVRPSDSSSFTFIYSVCLLLAAYLMGVMLVEDLVDLNHTVIIIFTVILFVLL 254 (594)
Q Consensus 175 ~fll~la~~~~~v~l~~~~~ir~~~~~~~~~~~~~~~f~~~~~~~~~l~~~l~~~~~~~~~~~~s~~~~~~~~~i~~~ll 254 (594)
+ +.. .++++ ..+.. .+++..++..+ ..++.++. ++
T Consensus 168 -------~---------~~~---------~~~~~------------~~~~~------~~~~~~v~~pY-l~~~~~lv-ll 202 (422)
T COG0738 168 -------V---------ALT---------MSAAQ------------ILAIK------GADASSVQFPY-LILAGLLV-LL 202 (422)
T ss_pred -------h---------hhc---------cCHHH------------HHHHH------HHHHHhhhhHH-HHHHHHHH-HH
Confidence 0 000 00000 00000 00001111111 11111111 11
Q ss_pred hhcchhhhhhcccccCCChhhhhhcCCCCCCCCCCCCCcchhhhhcccccCCCCccCCCchhHHHHHHHHHHHHHHhhhh
Q 007654 255 FIPIVIPIILSFFLERTDPAEEALLSKPENMEPGKSNQETDEVILSEVEDEKPKDVDLLPASERRKRIAQLQARLFHAAA 334 (594)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (594)
.. .. .. .+.|+.+++ +++ +.
T Consensus 203 ~v----~~---~~-----------~k~p~~~~~----------------~~~--~~------------------------ 222 (422)
T COG0738 203 AV----LI---LL-----------SKLPDLQVA----------------APS--LG------------------------ 222 (422)
T ss_pred HH----HH---Hh-----------ccCCcCCcc----------------ccc--cc------------------------
Confidence 11 00 00 011111000 000 00
Q ss_pred hhhhhhhccCCCCCCCCCCHHHHhhcHHHHHHHHHHHhhhcchhheecchHHHHHH-hCCCcc--hhHHHHHHHhhhhhc
Q 007654 335 EGAVRVKRRRGPHRGEDFTLTQALIKADFWLIFFSLLLGSGSGLTVIDNLGQMSQS-LGYDNT--HIFVSMISIWNFLGR 411 (594)
Q Consensus 335 ~~~~~~~~~~~p~~~~d~t~~e~l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~~-~g~~~~--~~~Vsl~si~n~~GR 411 (594)
+ + .+.+..+++|++.+|+-.+..++=.|.=.++=+.+.+.+.+ .|.+.. +.++|.+-.+-.+||
T Consensus 223 ------~----~---~~~~~~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGR 289 (422)
T COG0738 223 ------A----S---GSAGLSSLFQNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGR 289 (422)
T ss_pred ------c----c---ccchHHHHHhChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHH
Confidence 0 1 12267889999999999999999999999999999999988 566654 348999999999999
Q ss_pred ccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhh
Q 007654 412 VGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLGMGWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYN 491 (594)
Q Consensus 412 l~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~~~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg 491 (594)
++.-++..|+..++ .+.+.+.....+ ++.....+...-..+..++|+-.+..|...=++..+..| +|=+.-=+
T Consensus 290 Fig~~lm~~~~~~k-----~Laf~a~~~ill-~~~~~l~~g~v~~~~l~~ig~F~simfPTIfslal~~l~-~~ts~~s~ 362 (422)
T COG0738 290 FIGSALMSRIKPEK-----YLAFYALIAILL-LLAVALIGGVVALYALFLIGLFNSIMFPTIFSLALKNLG-EHTSVGSG 362 (422)
T ss_pred HHHHHHHHHhCHHH-----HHHHHHHHHHHH-HHHHHHhcChHHHHHHHHHHHHhHHHHHHHHHHHHhccC-ccccccce
Confidence 76666665664422 222222111111 111122222334457888999999999999999999999 66555555
Q ss_pred HHHhhhhHHHHHHHHHHHHHHHHhhh
Q 007654 492 FLTLANPAGSLVFSGLIASYIYDHEA 517 (594)
Q Consensus 492 ~~~~a~~~g~~~~~~~l~G~iyd~~~ 517 (594)
++.++. +|+.+ -|.+.|.+-|+.+
T Consensus 363 ~l~mai-vGGAi-iP~l~G~i~d~~g 386 (422)
T COG0738 363 LLVMAI-VGGAI-IPPLQGVIADMFG 386 (422)
T ss_pred eeeehe-ecchH-HHHHHHHHHHhhh
Confidence 555554 66664 5999999999886
No 80
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.28 E-value=1.2e-09 Score=118.03 Aligned_cols=132 Identities=13% Similarity=0.116 Sum_probs=93.1
Q ss_pred hHHHHHHHHHHHHhcCcccccccccHHHHhhhCCChhhHHHHHHHHhhhh-hcccchhhhhchhhhHHHHHHHHHHHHHH
Q 007654 15 RWLVFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGD-SVGFLAGSLCEVLPIWGALLVGALQNFIG 93 (594)
Q Consensus 15 Rw~~l~a~~~i~l~~Gt~Y~fS~ys~~Lk~~lg~sq~~l~~i~~a~~~G~-~~gi~~G~l~D~~gp~~~l~iG~~~~~~G 93 (594)
.+..+..+.++.......+.+.+ +++.++++.++.++.++..+..++. .++++.|.+.||+|+|.++.++.+...++
T Consensus 4 ~f~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~ 81 (393)
T PRK11195 4 GFYAIMAAQFFSALADNALLFAA--IALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLG 81 (393)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHH--HHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHH
Confidence 34556666666555444444433 4567789999999988766665555 45899999999999999999988877666
Q ss_pred HHHHHHHHhcCCCChhHHHHHHHHHhhccccchhhhhHHHHHHHhcC-CCCCceehhhHhhhhhhH
Q 007654 94 YGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGG 158 (594)
Q Consensus 94 y~~~~l~~~g~i~~~s~~~l~~~~~l~g~G~~~~~taal~t~~k~FP-~~RG~~~Gl~~a~~GLSa 158 (594)
....... + +. ...-++.|.+.++.+.+......+++| ++|+++.|+.-....++.
T Consensus 82 ~~~~~~~-----~--~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~ 137 (393)
T PRK11195 82 CLLMLFG-----I--HP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAI 137 (393)
T ss_pred HHHHHHH-----H--HH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHH
Confidence 5543221 1 12 122245677888899999999999998 569999999876655544
No 81
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.24 E-value=5.4e-09 Score=113.66 Aligned_cols=122 Identities=14% Similarity=0.124 Sum_probs=84.0
Q ss_pred cccccccHHHHhhhCCChhhHHHH-HHHHhhhhhcccchhhhhchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHH
Q 007654 33 YLFGSISPVIKSSLNYNQKQIARL-GVAKDLGDSVGFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLW 111 (594)
Q Consensus 33 Y~fS~ys~~Lk~~lg~sq~~l~~i-~~a~~~G~~~gi~~G~l~D~~gp~~~l~iG~~~~~~Gy~~~~l~~~g~i~~~s~~ 111 (594)
..+.--=|++.+++|.|+++.+.. ++....+....++.|.+.||+|+|.++.++.+...++..+.. . . .+++
T Consensus 33 ~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~--~---a--~~~~ 105 (413)
T PRK15403 33 DLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATL--F---T--TSMT 105 (413)
T ss_pred HhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHH--H---c--CCHH
Confidence 333444446788999999999985 444433334578899999999999999988877666555432 2 1 2466
Q ss_pred HHHHHHHhhccccchhhhhHHHHHHHhcCC-CCCceehhhHhhhhhhHHHH
Q 007654 112 AMCILIFVGNNGETYFNTAALVSCVQNFPK-SRGPVVGILKGFAGLGGAIL 161 (594)
Q Consensus 112 ~l~~~~~l~g~G~~~~~taal~t~~k~FP~-~RG~~~Gl~~a~~GLSa~i~ 161 (594)
.+.+.-++.|.+.++..+........+||+ +|+++.++......++..+-
T Consensus 106 ~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 156 (413)
T PRK15403 106 QFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIG 156 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 666666666666665555555556678886 47888888877777776544
No 82
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.16 E-value=1.9e-08 Score=110.84 Aligned_cols=364 Identities=15% Similarity=0.099 Sum_probs=205.3
Q ss_pred ccHHHHhhhC--CChhhHHHH----HHHHhhhhhc-ccchhhhhchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCChhH
Q 007654 38 ISPVIKSSLN--YNQKQIARL----GVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPL 110 (594)
Q Consensus 38 ys~~Lk~~lg--~sq~~l~~i----~~a~~~G~~~-gi~~G~l~D~~gp~~~l~iG~~~~~~Gy~~~~l~~~g~i~~~s~ 110 (594)
+.+.+.+++| .|.++++++ ..+--+|..+ .+..|.+.|++|+|.++++..++..++-.++.++..- .++
T Consensus 41 ~n~t~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~----~~~ 116 (485)
T KOG0569|consen 41 INETLIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSA----PSF 116 (485)
T ss_pred HHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHh----hhH
Confidence 3455667888 556666664 3344455555 5678999999999999999888887777776555332 235
Q ss_pred HHHHHHHHhhccccchhhhhHHHHHHHhcCCC-CCceehhhHhhhhhhHHHHHHHHH-Hhc-CCChHHHHHHHHHHHHHH
Q 007654 111 WAMCILIFVGNNGETYFNTAALVSCVQNFPKS-RGPVVGILKGFAGLGGAILTQVYT-MIH-APDHANLIFMVAVGPAMV 187 (594)
Q Consensus 111 ~~l~~~~~l~g~G~~~~~taal~t~~k~FP~~-RG~~~Gl~~a~~GLSa~i~s~i~~-~~f-~~~~~~fll~la~~~~~v 187 (594)
.++.+-=++.|..++........--..-=|++ ||.+.-+.--++.++-.+-.++.. .++ .+|...+++.+..+|..+
T Consensus 117 e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~ 196 (485)
T KOG0569|consen 117 EMLILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALL 196 (485)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHH
Confidence 55444556677777776666666666777976 999887777776666544433332 244 345567777777777777
Q ss_pred HHhhheeecccCCCCcCCCCCCCchhHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHhhhcchhhhhhccc
Q 007654 188 VIALMFIIRPVGGHRQVRPSDSSSFTFIYSVCLLLAAYLMGVMLVEDLVDLNHTVIIIFTVILFVLLFIPIVIPIILSFF 267 (594)
Q Consensus 188 ~l~~~~~ir~~~~~~~~~~~~~~~f~~~~~~~~~l~~~l~~~~~~~~~~~~s~~~~~~~~~i~~~ll~~~~~~~~~~~~~ 267 (594)
.++..+++-.-| + |++.. .-+.+++-+ .+
T Consensus 197 ~l~~l~~~PESP----------k--------------~Ll~~-----k~~~~~A~~-sl--------------------- 225 (485)
T KOG0569|consen 197 QLALLPFLPESP----------K--------------YLLIK-----KGDEEEARK-AL--------------------- 225 (485)
T ss_pred HHHHHhcCCCCc----------c--------------hHHHH-----cCCHHHHHH-HH---------------------
Confidence 766655432111 1 11111 000000000 00
Q ss_pred ccCCChhhhhhcCCCCCCCCCCCCCcchhhhhcccccCCCCccCCCchhHHHHHHHHHHHHHHhhhhhhhhhhhccCCCC
Q 007654 268 LERTDPAEEALLSKPENMEPGKSNQETDEVILSEVEDEKPKDVDLLPASERRKRIAQLQARLFHAAAEGAVRVKRRRGPH 347 (594)
Q Consensus 268 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 347 (594)
+.++.. +|++.+. .++.. +. .+.+.++
T Consensus 226 ---------~~y~G~--------------------~~~~~~~-----e~~~~-------------e~-----~~~~~~~- 252 (485)
T KOG0569|consen 226 ---------KFYRGK--------------------EDVEAEI-----EEMLR-------------EI-----EEEELEK- 252 (485)
T ss_pred ---------HHHhCC--------------------CcchhHH-----HHHHH-------------HH-----HHhcccc-
Confidence 000000 0000000 00000 00 0000001
Q ss_pred CCCCCCHHHHhhcHH----HHHHHHHHHhhhcchhheecc-hHHHHHHhCCCcchh--HHHHHHHhhhhhcccccchhhh
Q 007654 348 RGEDFTLTQALIKAD----FWLIFFSLLLGSGSGLTVIDN-LGQMSQSLGYDNTHI--FVSMISIWNFLGRVGGGYFSEI 420 (594)
Q Consensus 348 ~~~d~t~~e~l~t~~----Fwll~~~~~~~~g~Gl~vi~n-~~~i~~~~g~~~~~~--~Vsl~si~n~~GRl~~G~lsD~ 420 (594)
..+.|++|++++++ .++.....++-..+|...+.. .-.|.++.|.+...+ .-...++.|....+.+.++.||
T Consensus 253 -~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~ 331 (485)
T KOG0569|consen 253 -KKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDR 331 (485)
T ss_pred -ccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 24678888887633 455566666667788777764 455777889887533 4557899999999999999999
Q ss_pred hhhccCCchhHHHHHHHHHHHHHHHH-------HhccCchh---HHHHHHHHHhhhhhccc-hhHHHHHHhhccCchhhh
Q 007654 421 IVRDYAYPRPVAMAVAQFVMAIGHIF-------LGMGWPGA---MYVGTLLIGLGYGAHWA-IVPAAASELFGLKKFGAL 489 (594)
Q Consensus 421 l~r~~~~~r~~~l~~~~~~~~~~~ll-------~~~~~~~~---l~~~~~liG~~~G~~~~-l~p~i~s~~FG~k~~g~n 489 (594)
++| |+..+.... ++.+..++ .....+.. ...+..+..+.|+...+ +-..+++|+|...+=++-
T Consensus 332 ~gR-----RpLll~~~~-~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa 405 (485)
T KOG0569|consen 332 LGR-----RPLLLISLS-LMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAA 405 (485)
T ss_pred cCC-----cHHHHHHHH-HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHH
Confidence 998 333332222 22222111 11111111 22333444445554433 334678999999888887
Q ss_pred hhHHHhhhhHHHHHHHHHHHHHHHHhhh
Q 007654 490 YNFLTLANPAGSLVFSGLIASYIYDHEA 517 (594)
Q Consensus 490 yg~~~~a~~~g~~~~~~~l~G~iyd~~~ 517 (594)
..+......+..++. ...+-.+++.-|
T Consensus 406 ~s~~~~~~w~~~fiv-~~~fp~l~~~~g 432 (485)
T KOG0569|consen 406 QSVATAVNWLSNFIV-GFAFPPLQNVIG 432 (485)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHhc
Confidence 777777766666653 355555666554
No 83
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.10 E-value=6e-07 Score=99.71 Aligned_cols=126 Identities=11% Similarity=0.038 Sum_probs=89.7
Q ss_pred ccccHHHHhh--hCCChhhHHHH-HHHHhhhhhcccchhhhhch-hhhHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHH
Q 007654 36 GSISPVIKSS--LNYNQKQIARL-GVAKDLGDSVGFLAGSLCEV-LPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLW 111 (594)
Q Consensus 36 S~ys~~Lk~~--lg~sq~~l~~i-~~a~~~G~~~gi~~G~l~D~-~gp~~~l~iG~~~~~~Gy~~~~l~~~g~i~~~s~~ 111 (594)
+....-+.++ +|+|+.|...+ +..........+++|.+.|| +|+|.++.+|.+...+|+.++.+. + +++
T Consensus 31 ~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~-----~--~~~ 103 (475)
T TIGR00924 31 GILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMS-----I--YPD 103 (475)
T ss_pred HHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhc-----c--cHh
Confidence 3344557777 99999999996 44444444557889999999 799999999999999998865432 1 244
Q ss_pred HHHHHHHhhccccchhhhhHHHHHHHhcCC----CCCceehhhHhhhhhhHHHHHHHHHHh
Q 007654 112 AMCILIFVGNNGETYFNTAALVSCVQNFPK----SRGPVVGILKGFAGLGGAILTQVYTMI 168 (594)
Q Consensus 112 ~l~~~~~l~g~G~~~~~taal~t~~k~FP~----~RG~~~Gl~~a~~GLSa~i~s~i~~~~ 168 (594)
.+.+...+.|.|.+.+..+......++||+ +|+.+.++.-...-+|+++=..+...+
T Consensus 104 ~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l 164 (475)
T TIGR00924 104 LIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVI 164 (475)
T ss_pred HHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHH
Confidence 444444455677777777777777899974 388898887777777776555544433
No 84
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.07 E-value=2.7e-07 Score=103.18 Aligned_cols=158 Identities=13% Similarity=0.080 Sum_probs=94.5
Q ss_pred ccccc-ccHHHHhhhCCChhhHHHHHHHHhhhh-hcccchhhhhch-hhhHHHHHHHHHHHHHHHHHHHHHHhcCCCChh
Q 007654 33 YLFGS-ISPVIKSSLNYNQKQIARLGVAKDLGD-SVGFLAGSLCEV-LPIWGALLVGALQNFIGYGWVWLIVTGRAPVLP 109 (594)
Q Consensus 33 Y~fS~-ys~~Lk~~lg~sq~~l~~i~~a~~~G~-~~gi~~G~l~D~-~gp~~~l~iG~~~~~~Gy~~~~l~~~g~i~~~s 109 (594)
|.+.. ....+++++|+|+++...+........ ...+++|.+.|| +|+|.++.+|.+...+|+.++.+. . . .
T Consensus 38 y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~--~---~-~ 111 (500)
T PRK09584 38 YGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWS--G---H-D 111 (500)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHh--c---c-c
Confidence 44443 345567899999998877533333333 335689999999 599999999999988888765432 1 1 2
Q ss_pred HHHHHHHHHhhccccchhhhhHHHHHHHhcCCC---CCceehhhHhhhhhhHHHHHHHHHHhcCCChHHHHHHHHHHHHH
Q 007654 110 LWAMCILIFVGNNGETYFNTAALVSCVQNFPKS---RGPVVGILKGFAGLGGAILTQVYTMIHAPDHANLIFMVAVGPAM 186 (594)
Q Consensus 110 ~~~l~~~~~l~g~G~~~~~taal~t~~k~FP~~---RG~~~Gl~~a~~GLSa~i~s~i~~~~f~~~~~~fll~la~~~~~ 186 (594)
.+.+.+...+.+.|.+...........++||++ |+.+.++.-.+..+|+.+-..+...+.+.-.-...+.+......
T Consensus 112 ~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~ 191 (500)
T PRK09584 112 AGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGML 191 (500)
T ss_pred HHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHH
Confidence 333333334455667766666667778899854 34466766667777775544444333222122334444444444
Q ss_pred HHHhhheeec
Q 007654 187 VVIALMFIIR 196 (594)
Q Consensus 187 v~l~~~~~ir 196 (594)
++++...+.+
T Consensus 192 i~~i~~~~~~ 201 (500)
T PRK09584 192 ITVVNFAFCQ 201 (500)
T ss_pred HHHHHHHHhH
Confidence 4444433333
No 85
>PRK09669 putative symporter YagG; Provisional
Probab=99.05 E-value=1.8e-08 Score=110.37 Aligned_cols=157 Identities=11% Similarity=0.056 Sum_probs=101.5
Q ss_pred HHHHhhcHHHHHHHHHHHhhhcchhheecchHHHHHHh--CCCcch-hHHHHHHHhhhhhcccccchhhhhhhccCCchh
Q 007654 354 LTQALIKADFWLIFFSLLLGSGSGLTVIDNLGQMSQSL--GYDNTH-IFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRP 430 (594)
Q Consensus 354 ~~e~l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~~~--g~~~~~-~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~ 430 (594)
.++.+|++.||.+.+..++... +....+......... +.+... .......+...++-+++++++||++|++..
T Consensus 222 ~~~~~~n~~~~~l~~~~~~~~~-~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~--- 297 (444)
T PRK09669 222 LKLLLGNSQWRIMFIFNVVLLT-AVVTRGGATLYYVNYVLLRPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAF--- 297 (444)
T ss_pred HHHHhCCchHHHHHHHHHHHHH-HHHHHhhhhheeeeeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHH---
Confidence 4678899999998776654422 222222222222121 111111 233344567778889999999999885432
Q ss_pred HHHHHHHHHHHH-HHHHHh--ccCchhHHHHHHHHHhhhhhccchhHHHHHHhh-------ccCchhhhhhHHHhhhhHH
Q 007654 431 VAMAVAQFVMAI-GHIFLG--MGWPGAMYVGTLLIGLGYGAHWAIVPAAASELF-------GLKKFGALYNFLTLANPAG 500 (594)
Q Consensus 431 ~~l~~~~~~~~~-~~ll~~--~~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~F-------G~k~~g~nyg~~~~a~~~g 500 (594)
. ...++..+ +..++. ..+...+++..++.|+++|+...+..++++|.. |.|.-|..|+......-+|
T Consensus 298 -~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg 374 (444)
T PRK09669 298 -K--WTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLG 374 (444)
T ss_pred -H--HHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHH
Confidence 1 11221111 221222 223445677788899999999999999999887 7788888999888887888
Q ss_pred HHHHHHHHHHHHHHhhhh
Q 007654 501 SLVFSGLIASYIYDHEAE 518 (594)
Q Consensus 501 ~~~~~~~l~G~iyd~~~~ 518 (594)
.. +++.+.|.++|..|-
T Consensus 375 ~a-lg~~i~g~ll~~~Gy 391 (444)
T PRK09669 375 LA-IGGAVVGWILAWVDY 391 (444)
T ss_pred HH-HHHHHHHHHHHHcCC
Confidence 77 589999999998874
No 86
>PRK09848 glucuronide transporter; Provisional
Probab=99.05 E-value=1e-08 Score=112.27 Aligned_cols=157 Identities=12% Similarity=0.104 Sum_probs=99.2
Q ss_pred HHHHhhcHHHHHHHHHHHhhhcchhheecchHHHHHH-hCCCcchh-HHHH-HHHhhhhhcccccchhhhhhhccCCchh
Q 007654 354 LTQALIKADFWLIFFSLLLGSGSGLTVIDNLGQMSQS-LGYDNTHI-FVSM-ISIWNFLGRVGGGYFSEIIVRDYAYPRP 430 (594)
Q Consensus 354 ~~e~l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~~-~g~~~~~~-~Vsl-~si~n~~GRl~~G~lsD~l~r~~~~~r~ 430 (594)
.++++|++.|+.+.++.++....-...........++ +|.++... ...+ ..+...++.++++.++||+++++.
T Consensus 221 ~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~---- 296 (448)
T PRK09848 221 LQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNT---- 296 (448)
T ss_pred HHHHhCCchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHH----
Confidence 4678899999998877766544333332222223333 34433222 2122 245566778888889988876432
Q ss_pred HHHHHHHHHHHHHHHHHhcc---CchhHHHHHHHHHhhhhhccchhHHHHHHh-------hccCchhhhhhHHHhhhhHH
Q 007654 431 VAMAVAQFVMAIGHIFLGMG---WPGAMYVGTLLIGLGYGAHWAIVPAAASEL-------FGLKKFGALYNFLTLANPAG 500 (594)
Q Consensus 431 ~~l~~~~~~~~~~~ll~~~~---~~~~l~~~~~liG~~~G~~~~l~p~i~s~~-------FG~k~~g~nyg~~~~a~~~g 500 (594)
+.+...+..++.+++... +...+++..++.|++.|..+....++++|. .|.|+-|..+|+.....-+|
T Consensus 297 --~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg 374 (448)
T PRK09848 297 --FLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCG 374 (448)
T ss_pred --HHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHH
Confidence 233334444444333222 223455566778899988888888887665 36677899999988888888
Q ss_pred HHHHHHHHHHHHHHhhh
Q 007654 501 SLVFSGLIASYIYDHEA 517 (594)
Q Consensus 501 ~~~~~~~l~G~iyd~~~ 517 (594)
.. +++.+.|.+.|..|
T Consensus 375 ~a-ig~~i~g~~l~~~G 390 (448)
T PRK09848 375 QA-IGGSIPAFILGLSG 390 (448)
T ss_pred HH-HHHHHHHHHHHHcC
Confidence 87 58889999988766
No 87
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.04 E-value=8e-07 Score=99.16 Aligned_cols=118 Identities=15% Similarity=0.117 Sum_probs=84.7
Q ss_pred cccHHHHhhhCCChhhHHHH-HHHHhhhhhcccchhhhhch-hhhHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHH
Q 007654 37 SISPVIKSSLNYNQKQIARL-GVAKDLGDSVGFLAGSLCEV-LPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMC 114 (594)
Q Consensus 37 ~ys~~Lk~~lg~sq~~l~~i-~~a~~~G~~~gi~~G~l~D~-~gp~~~l~iG~~~~~~Gy~~~~l~~~g~i~~~s~~~l~ 114 (594)
.....+++.+|+++++.+++ +....+.....+++|++.|| +|+|.++.+|.+...+|+....+. . . +...+.
T Consensus 36 ~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~--~---~-~~~ll~ 109 (489)
T PRK10207 36 ILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMS--L---L-KPDLIF 109 (489)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHh--c---c-chhHHH
Confidence 44556788899999999886 44444444557789999999 899999999999999999876543 1 1 112233
Q ss_pred HHHHhhccccchhhhhHHHHHHHhcCCC---CCceehhhHhhhhhhHHH
Q 007654 115 ILIFVGNNGETYFNTAALVSCVQNFPKS---RGPVVGILKGFAGLGGAI 160 (594)
Q Consensus 115 ~~~~l~g~G~~~~~taal~t~~k~FP~~---RG~~~Gl~~a~~GLSa~i 160 (594)
+..++.+.|.+...........+.||++ |+.+-++.-....+|+++
T Consensus 110 ~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~ 158 (489)
T PRK10207 110 IALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLI 158 (489)
T ss_pred HHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHH
Confidence 3444556788877777777888999753 466777777777777654
No 88
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.02 E-value=2.3e-08 Score=107.58 Aligned_cols=150 Identities=17% Similarity=0.153 Sum_probs=106.0
Q ss_pred hhcchhHHHHHHHHHHHHhcCcc-cccccccHHHHhhhCCChhhHHHHH-HHHhhhhhcccchhhhhchhhhHHHHHHHH
Q 007654 10 SFFNNRWLVFVAAMWIQSCAGIG-YLFGSISPVIKSSLNYNQKQIARLG-VAKDLGDSVGFLAGSLCEVLPIWGALLVGA 87 (594)
Q Consensus 10 ~~~~~Rw~~l~a~~~i~l~~Gt~-Y~fS~ys~~Lk~~lg~sq~~l~~i~-~a~~~G~~~gi~~G~l~D~~gp~~~l~iG~ 87 (594)
+++.+||+.|++..+.+.+.|-. -.|+..+....+-|| |.+..++.+ +...+..-+++++=++.||+|-|.++++|+
T Consensus 38 rVy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt 116 (480)
T KOG2563|consen 38 RVYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGT 116 (480)
T ss_pred ccchhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHH
Confidence 68899999999999999988876 467777777888898 555555553 344455567888999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCChhHH--HHHHHHHhhccccchhhhhHHHHHHHhcC-CCCCceehhhHhhhhhhHHHH
Q 007654 88 LQNFIGYGWVWLIVTGRAPVLPLW--AMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAIL 161 (594)
Q Consensus 88 ~~~~~Gy~~~~l~~~g~i~~~s~~--~l~~~~~l~g~G~~~~~taal~t~~k~FP-~~RG~~~Gl~~a~~GLSa~i~ 161 (594)
+++.+|..+=-.+....+++ .+| ..-.-..+.+..+-++..-+-+-+.-||| |+|-.|..+-.-.-=||.++-
T Consensus 117 ~ln~iGa~Ir~iss~p~v~~-~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg 192 (480)
T KOG2563|consen 117 VLNGIGAWIRLISSLPFVPP-LFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVG 192 (480)
T ss_pred HHHHHHHHHhhhccCccccc-cchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHH
Confidence 99999987643333333433 344 22245566666777777766788999996 678776554332222665444
No 89
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.97 E-value=3.4e-07 Score=96.40 Aligned_cols=344 Identities=15% Similarity=0.127 Sum_probs=208.2
Q ss_pred HHHHHHHHHHHHhcCcc-cccccccHHHHhhhCCChhhHHHHHHH-HhhhhhcccchhhhhchhhhHHHHHHHHHHHHHH
Q 007654 16 WLVFVAAMWIQSCAGIG-YLFGSISPVIKSSLNYNQKQIARLGVA-KDLGDSVGFLAGSLCEVLPIWGALLVGALQNFIG 93 (594)
Q Consensus 16 w~~l~a~~~i~l~~Gt~-Y~fS~ys~~Lk~~lg~sq~~l~~i~~a-~~~G~~~gi~~G~l~D~~gp~~~l~iG~~~~~~G 93 (594)
|+.+.+-+++....=+. -+-+--=+++++++|.|-++..++++. ....+.++++...+..|+|++-.+..+-++...|
T Consensus 11 ~~li~gIvlia~NLR~~itsvgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G 90 (395)
T COG2807 11 LLLLAGIVLIAFNLRPAITSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAG 90 (395)
T ss_pred hHHHHHHHHHHhccchhhhhhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHH
Confidence 55555555544433222 233444467788999999999988544 3344467889999999999999999988887777
Q ss_pred HHHHHHHHhcCCCChhHHHHHHHHHhhccccchhhhhHHHHHH-HhcCCCCCceehhhHhhhhhhHHHHHHHHHHhcCCC
Q 007654 94 YGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCV-QNFPKSRGPVVGILKGFAGLGGAILTQVYTMIHAPD 172 (594)
Q Consensus 94 y~~~~l~~~g~i~~~s~~~l~~~~~l~g~G~~~~~taal~t~~-k~FP~~RG~~~Gl~~a~~GLSa~i~s~i~~~~f~~~ 172 (594)
..+ ... .+.+.+..-.++.|.|.+..|. -+...+ |+||+|-|..+|+-..-.+.++++-+.+..-+
T Consensus 91 ~~i-----R~~---~~~~~L~~gt~l~G~gIav~nV-LLPslIK~~Fpk~~~~mtglYs~sl~~~aaLaa~lavpl---- 157 (395)
T COG2807 91 ILI-----RSL---GGLPLLFLGTLLAGAGIAVINV-LLPSLIKRDFPKRVGLMTGLYSTSLGAGAALAAALAVPL---- 157 (395)
T ss_pred HHH-----Hhc---ccHHHHHHHHHHHHhhHHHHHH-hhhHHHHhhcccchhhHHhHHHHHHHHHHHHHhhhhhHH----
Confidence 663 111 1345556566666766665543 222233 67999999999998888888876665333100
Q ss_pred hHHHHHHHHHHHHHHHHhhheeecccCCCCcCCCCCCCchhHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHH
Q 007654 173 HANLIFMVAVGPAMVVIALMFIIRPVGGHRQVRPSDSSSFTFIYSVCLLLAAYLMGVMLVEDLVDLNHTVIIIFTVILFV 252 (594)
Q Consensus 173 ~~~fll~la~~~~~v~l~~~~~ir~~~~~~~~~~~~~~~f~~~~~~~~~l~~~l~~~~~~~~~~~~s~~~~~~~~~i~~~ 252 (594)
.++..+...+. ..++.-..+
T Consensus 158 -----------------------------------------------------------a~~~~gW~~aL-~~WAl~all 177 (395)
T COG2807 158 -----------------------------------------------------------AQHSGGWRGAL-GFWALLALL 177 (395)
T ss_pred -----------------------------------------------------------HHhhccHHHHH-HHHHHHHHH
Confidence 00000111111 112211111
Q ss_pred HhhhcchhhhhhcccccCCChhhhhhcCCCCCCCCCCCCCcchhhhhcccccCCCCccCCCchhHHHHHHHHHHHHHHhh
Q 007654 253 LLFIPIVIPIILSFFLERTDPAEEALLSKPENMEPGKSNQETDEVILSEVEDEKPKDVDLLPASERRKRIAQLQARLFHA 332 (594)
Q Consensus 253 ll~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (594)
-++. |.+...++ +.. +++
T Consensus 178 Al~~---------WlPq~~r~-----------~~~----------------~~~-------------------------- 195 (395)
T COG2807 178 ALLI---------WLPQALRE-----------QAA----------------SIA-------------------------- 195 (395)
T ss_pred HHHH---------Hhhhcccc-----------ccc----------------ccc--------------------------
Confidence 0111 22111000 000 000
Q ss_pred hhhhhhhhhccCCCCCCCCCCHHHHhhcHHHHHHHHHHHhhhcchhheecchHHHHHHhCCCcchh--HHHHHHHhhhhh
Q 007654 333 AAEGAVRVKRRRGPHRGEDFTLTQALIKADFWLIFFSLLLGSGSGLTVIDNLGQMSQSLGYDNTHI--FVSMISIWNFLG 410 (594)
Q Consensus 333 ~~~~~~~~~~~~~p~~~~d~t~~e~l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~~~g~~~~~~--~Vsl~si~n~~G 410 (594)
. ..++-....|++.=|.+-+-|-+.+..--.++.=+.+|..+.|+++.+. .+|+..+.....
T Consensus 196 -------------~---~~~~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~ 259 (395)
T COG2807 196 -------------T---KLVSVRKVWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPT 259 (395)
T ss_pred -------------c---ccccccccccCchhHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHH
Confidence 0 0011123678899999887777777777777788999999999998654 899999998888
Q ss_pred cccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHhhhhhccchhHHHHHHhhccCch-hhh
Q 007654 411 RVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLGMGWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKF-GAL 489 (594)
Q Consensus 411 Rl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~~~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~-g~n 489 (594)
-+..-.+.+|. ++ .|++. ....+++.+|..-+...+....++-.++.|++.|+.|.+.=.++.+..-..+- +.-
T Consensus 260 ~ll~P~la~R~--~n--~r~~~-~~~~~~~l~G~~G~~~~P~~~~~lw~~llG~G~G~~F~laL~li~~rs~~a~~Aa~L 334 (395)
T COG2807 260 ALLIPLLARRS--KN--QRPLV-VLALLLMLVGLVGLLLAPGQLPILWALLLGLGQGGAFPLALTLILLRSSDAAIAAAL 334 (395)
T ss_pred HHHHHHHHHHh--cc--cchHH-HHHHHHHHHHHHHHHHhhhhHHHHHHHHHhCccchHHHHHHHHHHhhcCChHHHHHH
Confidence 88888888762 22 33333 33444445554333222222222236999999999999998888888754442 333
Q ss_pred hhHHH-hhhhHHHHHHHHHHHHHHHHhhh
Q 007654 490 YNFLT-LANPAGSLVFSGLIASYIYDHEA 517 (594)
Q Consensus 490 yg~~~-~a~~~g~~~~~~~l~G~iyd~~~ 517 (594)
-|+.. .++.+++ ++|.+.|+++|.+|
T Consensus 335 SgmaQg~GYllAa--~GP~l~G~lhDa~g 361 (395)
T COG2807 335 SGMAQGVGYLLAA--FGPWLFGFLHDATG 361 (395)
T ss_pred HHHhhhhhHHHHh--hhhhhHhHHHHhcC
Confidence 33332 3455555 48999999999987
No 90
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=98.96 E-value=1.9e-08 Score=117.00 Aligned_cols=190 Identities=16% Similarity=0.152 Sum_probs=128.1
Q ss_pred HHHHhhcHHHHHHHHHHHhhhcch---hheecchHH-HHHHhCCCcch--hHHHHHHHhhhhhcccccchhhhhhhccCC
Q 007654 354 LTQALIKADFWLIFFSLLLGSGSG---LTVIDNLGQ-MSQSLGYDNTH--IFVSMISIWNFLGRVGGGYFSEIIVRDYAY 427 (594)
Q Consensus 354 ~~e~l~t~~Fwll~~~~~~~~g~G---l~vi~n~~~-i~~~~g~~~~~--~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~ 427 (594)
+.+.-.++..|.+++++.++...- ..+++.+-+ +.+++|.+... ...+++.++..+|.+++|+++||++||+..
T Consensus 156 l~~~~~~~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~l 235 (742)
T TIGR01299 156 IQECGHGRFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCL 235 (742)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH
Confidence 344556788887776666554322 223343333 44567877653 377899999999999999999999995532
Q ss_pred chhHHHHHHHHHHHHHHHHHh-ccCchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHH
Q 007654 428 PRPVAMAVAQFVMAIGHIFLG-MGWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSG 506 (594)
Q Consensus 428 ~r~~~l~~~~~~~~~~~ll~~-~~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~ 506 (594)
.+..++..++.++.. ..+...+++.-++.|++.|+.+.+.+.+++|++..++-|..++++.+.+.+|.. +++
T Consensus 236 ------ii~lil~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~i-la~ 308 (742)
T TIGR01299 236 ------LICLSVNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGI-YAA 308 (742)
T ss_pred ------HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH-HHH
Confidence 223333333333332 234456778889999999999999999999999999999999999999999887 477
Q ss_pred HHHHHHHHhhhhcccCcccccccccccccCCCCCCCCCccccCcccHHHHHHHHHHHHHHHHHHH
Q 007654 507 LIASYIYDHEAEKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTSMIMSGLCIVAVILSM 571 (594)
Q Consensus 507 ~l~G~iyd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~ 571 (594)
.++..+....+-+.. . ...+....+|..|.+.+..+++++++..
T Consensus 309 ~la~~il~~~G~~~~------------------~---g~~~~~~gWR~l~~i~~lp~ll~ll~~~ 352 (742)
T TIGR01299 309 AMAWAIIPHYGWSFQ------------------M---GSAYQFHSWRVFVIVCAFPCVFAIGALT 352 (742)
T ss_pred HHHHHHHHhccchhc------------------c---ccccccccHHHHHHHHHHHHHHHHHHHH
Confidence 777666654432110 0 0011233588888887776666555443
No 91
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.91 E-value=1.3e-07 Score=102.96 Aligned_cols=160 Identities=19% Similarity=0.276 Sum_probs=114.1
Q ss_pred CHHHHhhcHHHHHHHHHHHhhhcchhheecchHHHHHH-hCCCc-chhHHHHHHHhhhhhcccccchhhhhhhccCCchh
Q 007654 353 TLTQALIKADFWLIFFSLLLGSGSGLTVIDNLGQMSQS-LGYDN-THIFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRP 430 (594)
Q Consensus 353 t~~e~l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~~-~g~~~-~~~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~ 430 (594)
.+++.+|+++|+.++.+.++....-.+..+......+. +|.+. ......+..+...++-+++++++||+++++.+
T Consensus 217 ~~~~~~~nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~--- 293 (428)
T PF13347_consen 217 SLRSLFRNRPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNEGLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVY--- 293 (428)
T ss_pred chhhhcccchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHHccceeeh---
Confidence 35778899999999888887644433333333344444 34443 23466678899999999999999999987754
Q ss_pred HHHHHHHHHHHHHHHHH--hc-cCchhHHHHHHHHHhhhhhccchhHHHHHHhh-------ccCchhhhhhHHHhhhhHH
Q 007654 431 VAMAVAQFVMAIGHIFL--GM-GWPGAMYVGTLLIGLGYGAHWAIVPAAASELF-------GLKKFGALYNFLTLANPAG 500 (594)
Q Consensus 431 ~~l~~~~~~~~~~~ll~--~~-~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~F-------G~k~~g~nyg~~~~a~~~g 500 (594)
....++.+++.+++ .. .+...+++..++.|+++|..+.+..++.+|.- |.|+-|..+++.....-++
T Consensus 294 ---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~ 370 (428)
T PF13347_consen 294 ---IIGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIG 370 (428)
T ss_pred ---hhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHH
Confidence 33333344443332 22 45667888999999999999999999999876 5677899999988777777
Q ss_pred HHHHHHHHHHHHHHhhhhc
Q 007654 501 SLVFSGLIASYIYDHEAEK 519 (594)
Q Consensus 501 ~~~~~~~l~G~iyd~~~~~ 519 (594)
.. +++.+.|.+.+..|-.
T Consensus 371 ~~-la~~i~g~~l~~~Gy~ 388 (428)
T PF13347_consen 371 QG-LAGAIVGLLLALVGYD 388 (428)
T ss_pred HH-HHHHHHHHHHHHhCcC
Confidence 76 4777888888877643
No 92
>PRK10504 putative transporter; Provisional
Probab=98.90 E-value=1.9e-08 Score=110.47 Aligned_cols=177 Identities=16% Similarity=0.299 Sum_probs=138.3
Q ss_pred cHHHHHHHHHHHhhhcchhheecchHHHHHHhCCCcch--hHHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHH
Q 007654 360 KADFWLIFFSLLLGSGSGLTVIDNLGQMSQSLGYDNTH--IFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQ 437 (594)
Q Consensus 360 t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~~~g~~~~~--~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~ 437 (594)
.+.+|++++.+++......++......+.+++|.+..+ ..++...+...++.+.+|.++||++||+.. ....
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~------~~~~ 82 (471)
T PRK10504 9 RWQLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIF------FTAI 82 (471)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHH------HHHH
Confidence 35789999988887766666677788888999998764 367888899999999999999999985432 2223
Q ss_pred HHHHHHHHHHhc-cCchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHHhh
Q 007654 438 FVMAIGHIFLGM-GWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYDHE 516 (594)
Q Consensus 438 ~~~~~~~ll~~~-~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~ 516 (594)
++..++.++... .+...+++.-++.|++.|..+......+.|++..++.++.+|+...+..+|.. ++|.+.|.+.|+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~g~~~~g~l~~~~ 161 (471)
T PRK10504 83 VLFTLGSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPL-LGPALGGLLVEYA 161 (471)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHH-hhhHHHHHHHhhc
Confidence 333334333322 33446777888999999999999999999999999999999999988888887 5999999998865
Q ss_pred hhcccCcccccccccccccCCCCCCCCCccccCcccHHHHHHHHHHHHHHHHHHHHHHhhh
Q 007654 517 AEKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTSMIMSGLCIVAVILSMILVHRT 577 (594)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~~l~~r~ 577 (594)
+ |+..|.+....+.++.+++.....|.
T Consensus 162 g----------------------------------w~~~f~~~~~~~~l~~~~~~~~~~~~ 188 (471)
T PRK10504 162 S----------------------------------WHWIFLINIPVGIIGAIATLMLMPNY 188 (471)
T ss_pred c----------------------------------HHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 3 89999999888888877776655443
No 93
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.90 E-value=1.5e-07 Score=104.75 Aligned_cols=344 Identities=16% Similarity=0.158 Sum_probs=189.5
Q ss_pred HHhhhCCChhhHHHHHHHHhhhh-hcccchhhhhchhhh-HHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHh
Q 007654 42 IKSSLNYNQKQIARLGVAKDLGD-SVGFLAGSLCEVLPI-WGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFV 119 (594)
Q Consensus 42 Lk~~lg~sq~~l~~i~~a~~~G~-~~gi~~G~l~D~~gp-~~~l~iG~~~~~~Gy~~~~l~~~g~i~~~s~~~l~~~~~l 119 (594)
+++.++....|++.+.+...+|= .+.+|+|++.||+++ +.....+.+...++++..| + .++|.+.+.=++
T Consensus 72 ~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~------~--~s~~~~ialr~l 143 (495)
T KOG2533|consen 72 LKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAA------V--HSFPGLIALRFL 143 (495)
T ss_pred CccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHH------H--hhhHHHHHHHHH
Confidence 67889999999999866666665 447899999999995 4444444444334444332 1 246666654444
Q ss_pred hccccchhhhhHHHHHHHhcC-CCCCceehhhHhhhhhhHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHhhheeeccc
Q 007654 120 GNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIHAPDHANLIFMVAVGPAMVVIALMFIIRPV 198 (594)
Q Consensus 120 ~g~G~~~~~taal~t~~k~FP-~~RG~~~Gl~~a~~GLSa~i~s~i~~~~f~~~~~~fll~la~~~~~v~l~~~~~ir~~ 198 (594)
.|.-++....+.+...-.||. ++||+..|+.-+.-++|+.+=+.|..++++=|..
T Consensus 144 lGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~------------------------ 199 (495)
T KOG2533|consen 144 LGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGS------------------------ 199 (495)
T ss_pred HHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCC------------------------
Confidence 445555566688888889995 6899999999999999998888777765421000
Q ss_pred CCCCcCCCCCCCchhHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHH-HhhhcchhhhhhcccccCCChhhhh
Q 007654 199 GGHRQVRPSDSSSFTFIYSVCLLLAAYLMGVMLVEDLVDLNHTVIIIFTVILFV-LLFIPIVIPIILSFFLERTDPAEEA 277 (594)
Q Consensus 199 ~~~~~~~~~~~~~f~~~~~~~~~l~~~l~~~~~~~~~~~~s~~~~~~~~~i~~~-ll~~~~~~~~~~~~~~~~~~~~~~~ 277 (594)
.. .......+.+ .+++.++ -+...+ +++ ++|++..
T Consensus 200 ------~~--~~gW~~~FiI---------------------------~G~i~~~~gi~~f~-------~lp--~~P~~~~ 235 (495)
T KOG2533|consen 200 ------GG--LAGWRWLFII---------------------------EGVITLVLGIVVFF-------FLP--DNPSKAW 235 (495)
T ss_pred ------CC--cCCceeehhH---------------------------HHHHHHHHHheEEE-------Eec--CChhhcc
Confidence 00 0000011100 0100000 001111 111 1111000
Q ss_pred hcCCCCCCCCCCCCCcchhhh-hcccccCCCCccCCCchhHHHHHHHHHHHHHHhhhhhhhhhhhccCCCCCCCCCCHHH
Q 007654 278 LLSKPENMEPGKSNQETDEVI-LSEVEDEKPKDVDLLPASERRKRIAQLQARLFHAAAEGAVRVKRRRGPHRGEDFTLTQ 356 (594)
Q Consensus 278 ~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~d~t~~e 356 (594)
++. ++++.. +.+.++++ ++.. .+.-+-..++|
T Consensus 236 fl~------------~~ek~~~~~~~~~~~----------------------------------~~~~-~~~~~~~~~~~ 268 (495)
T KOG2533|consen 236 FLT------------DEEKELVVERLRESP----------------------------------SGGI-ENKFKWKGFKE 268 (495)
T ss_pred ccc------------hHHHHHHHHHHHhcc----------------------------------CCCc-ccccCHHHHHH
Confidence 100 000000 00000000 0000 00012346789
Q ss_pred HhhcHHHHHHHHHHHhhhcchhheecchHHHHHH-hCCCcch--hHHHHHHHhhhhhcccccchhhhhhhccCCchhHHH
Q 007654 357 ALIKADFWLIFFSLLLGSGSGLTVIDNLGQMSQS-LGYDNTH--IFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAM 433 (594)
Q Consensus 357 ~l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~~-~g~~~~~--~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l 433 (594)
+++++..|.+.+..+|....--...+-+.-+.++ .|++..+ .+-..+.+.+.+|=+++|++|||+.. -...|..+.
T Consensus 269 a~~dp~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~-~~~~~~~~~ 347 (495)
T KOG2533|consen 269 ALKDPGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKT-IFARRLLFI 347 (495)
T ss_pred HHhchhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhh-hHHHHHHHH
Confidence 9999999999999999888777777777777777 3466543 35667889999999999999999741 011133344
Q ss_pred HHHHHHHHHHHHHHhccC-chhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhh--hHHHHHHHHHHHH
Q 007654 434 AVAQFVMAIGHIFLGMGW-PGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLAN--PAGSLVFSGLIAS 510 (594)
Q Consensus 434 ~~~~~~~~~~~ll~~~~~-~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~--~~g~~~~~~~l~G 510 (594)
...++...+++..+...+ ....+. ++-+|......+..+.+.+=.++..-|++-+.+.. ..+... +....+
T Consensus 348 ~~~~~~~~~g~~~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s-~~~~~~ 421 (495)
T KOG2533|consen 348 VFLCLYAIIGAISLLAAAVLPGAYG-----AFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGS-AGAISG 421 (495)
T ss_pred HHHHHHHHHHHHHHHhhccchHHhH-----HHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhH-HHHhhh
Confidence 555566666644333222 222221 12223333445566667776777777777765442 223332 334556
Q ss_pred HHHHh
Q 007654 511 YIYDH 515 (594)
Q Consensus 511 ~iyd~ 515 (594)
.+|-.
T Consensus 422 ~~~~~ 426 (495)
T KOG2533|consen 422 QLFRS 426 (495)
T ss_pred hhccc
Confidence 66543
No 94
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.90 E-value=6.7e-08 Score=106.97 Aligned_cols=156 Identities=12% Similarity=0.111 Sum_probs=100.8
Q ss_pred HHHhhcHHHHHHHHHHHhhhcchhheecchHHHH-HHhCCCcc--hhHHHHHHHhhhhhcccccchhhhhhhccCCchhH
Q 007654 355 TQALIKADFWLIFFSLLLGSGSGLTVIDNLGQMS-QSLGYDNT--HIFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPV 431 (594)
Q Consensus 355 ~e~l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~-~~~g~~~~--~~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~ 431 (594)
+..++++.|+.+....++... +....+...... +....+.. ....++.++...++-+++++++||+++|+..
T Consensus 225 ~~~~~n~~~~~ll~~~~~~~~-~~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~---- 299 (473)
T PRK10429 225 ALIYKNDQLSCLLGMALAYNI-ASNIINGFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILW---- 299 (473)
T ss_pred HHHhcCHHHHHHHHHHHHHHH-HHHHHhhheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHH----
Confidence 445688888887776665543 222222222211 11111221 1244556678888999999999999885542
Q ss_pred HHHHHHHHHHHHHHHH-----h-ccCchhHHHHHHHHHhhhhhccchhHHHHHHh-------hccCchhhhhhHHHhhhh
Q 007654 432 AMAVAQFVMAIGHIFL-----G-MGWPGAMYVGTLLIGLGYGAHWAIVPAAASEL-------FGLKKFGALYNFLTLANP 498 (594)
Q Consensus 432 ~l~~~~~~~~~~~ll~-----~-~~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~-------FG~k~~g~nyg~~~~a~~ 498 (594)
.+...+.+++.+.+ . ..+...+.+..++.|+++|..+.+.+++++|. .|.|.-|..|+......-
T Consensus 300 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K 377 (473)
T PRK10429 300 --AGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVK 377 (473)
T ss_pred --HHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHH
Confidence 12222222222211 1 12233466677888999999999999999998 888889999999988877
Q ss_pred HHHHHHHHHHHHHHHHhhhh
Q 007654 499 AGSLVFSGLIASYIYDHEAE 518 (594)
Q Consensus 499 ~g~~~~~~~l~G~iyd~~~~ 518 (594)
+|.. +++.+.|.+.|..|-
T Consensus 378 ~~~a-l~~~i~g~~l~~~Gy 396 (473)
T PRK10429 378 GGSA-FAAFFIGVVLGLIGY 396 (473)
T ss_pred HHHH-HHHHHHHHHHHHcCC
Confidence 7776 488999999997764
No 95
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.85 E-value=2.8e-08 Score=107.33 Aligned_cols=132 Identities=13% Similarity=0.200 Sum_probs=105.2
Q ss_pred heecchHHHHHHhCCCcch--hHHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHhc-cCchhH
Q 007654 379 TVIDNLGQMSQSLGYDNTH--IFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLGM-GWPGAM 455 (594)
Q Consensus 379 ~vi~n~~~i~~~~g~~~~~--~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~~-~~~~~l 455 (594)
+....+.++.+++|.++++ ..+++..+...++++.+|.++||++||+. +.....+..++.++... .+...+
T Consensus 38 ~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~------~~~~~~~~~~~~~~~~~~~~~~~l 111 (394)
T PRK10213 38 LPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYV------VILFAVLLTLSCLLVSFANSFSLL 111 (394)
T ss_pred HHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHH------HHHHHHHHHHHHHHHHHHChHHHH
Confidence 3345677888899988764 37889999999999999999999988553 23334444444444333 445578
Q ss_pred HHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHHhhh
Q 007654 456 YVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYDHEA 517 (594)
Q Consensus 456 ~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~~ 517 (594)
++.-++.|++.|..+...+.+++|+|..|+.++..++...+..+|.. ++|.+.+.+.+..+
T Consensus 112 ~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~-ig~~l~~~l~~~~g 172 (394)
T PRK10213 112 LIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALV-IAAPLGSFLGELIG 172 (394)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhcC
Confidence 88889999999999999999999999999999999999999988877 59999999987653
No 96
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.83 E-value=2.9e-07 Score=96.57 Aligned_cols=153 Identities=15% Similarity=0.099 Sum_probs=109.1
Q ss_pred HHhhcHHHHHHHHHHHhhhcchhheecchHHHHHH---hCCCcc--hhHHHHHHHhhhhhcccccchhhhhhhccCCchh
Q 007654 356 QALIKADFWLIFFSLLLGSGSGLTVIDNLGQMSQS---LGYDNT--HIFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRP 430 (594)
Q Consensus 356 e~l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~~---~g~~~~--~~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~ 430 (594)
+.+|++.+|+..+.+++-.|.-..+.+......++ .|+++. ...++.+..+-.+||++.+.++||+++++..
T Consensus 135 ~~~~~~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l--- 211 (310)
T TIGR01272 135 SAFQFTHLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYL--- 211 (310)
T ss_pred hHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHH---
Confidence 46788999999898888888777776667766654 366654 3478999999999999999999999874421
Q ss_pred HHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHH
Q 007654 431 VAMAVAQFVMAIGHIFLGMGWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIAS 510 (594)
Q Consensus 431 ~~l~~~~~~~~~~~ll~~~~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G 510 (594)
.+...+.+++.+++...+......+..++|++.+..+...-+...+.++ ++-++.-+++. ...+|+. +.|.+.|
T Consensus 212 ---~~~~~l~~~~~~l~~~~~~~~~~~~~~l~g~~~s~i~P~~~s~a~~~~~-~~~~~asai~~-~~~~Gg~-i~P~l~G 285 (310)
T TIGR01272 212 ---AFNAFLAVLLSIGAALTHGYVAMWFVLALGLFNSIMFPTIFSLALNALG-RHTSQGSGILC-LAIVGGA-IVPLLQG 285 (310)
T ss_pred ---HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-hhhhhhHHHHH-HHHhcch-HHHHHHH
Confidence 2222333333333322222223347778899999999998888889888 55666667654 4447776 4799999
Q ss_pred HHHHhhh
Q 007654 511 YIYDHEA 517 (594)
Q Consensus 511 ~iyd~~~ 517 (594)
.+.|+.+
T Consensus 286 ~lad~~g 292 (310)
T TIGR01272 286 SLADCLG 292 (310)
T ss_pred HHHHhcc
Confidence 9999775
No 97
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.82 E-value=9.3e-08 Score=101.12 Aligned_cols=173 Identities=14% Similarity=0.154 Sum_probs=128.4
Q ss_pred cHHHHHHHHHHHhhhcch-hheecchHHHHHHhCCCcchh--HHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHH
Q 007654 360 KADFWLIFFSLLLGSGSG-LTVIDNLGQMSQSLGYDNTHI--FVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVA 436 (594)
Q Consensus 360 t~~Fwll~~~~~~~~g~G-l~vi~n~~~i~~~~g~~~~~~--~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~ 436 (594)
+++++.+...+.+....+ .++......+.+++|.++.+. ..++..+.+.++.+.+|.++||++||+.. ...
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~------~~~ 76 (385)
T TIGR00710 3 AKAFALLLGCLSILGPLGIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVL------LLG 76 (385)
T ss_pred chHHHHHHHHHHHHHHHHHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHH------HHH
Confidence 345555555555554444 444455666778889887643 78899999999999999999999885432 333
Q ss_pred HHHHHHHHHHHh-ccCchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHHh
Q 007654 437 QFVMAIGHIFLG-MGWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYDH 515 (594)
Q Consensus 437 ~~~~~~~~ll~~-~~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~ 515 (594)
..+..++.++.. ..+...+.+..++.|++.|........++.|++..++-++.+|+......+|.. ++|.+.+.+.|.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~g~~~~~~l~~~ 155 (385)
T TIGR00710 77 LFIFALSSLGLALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPA-VAPLLGGYILVW 155 (385)
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 444444444433 234456777888999999999999999999999989999999999999989887 589999988886
Q ss_pred hhhcccCcccccccccccccCCCCCCCCCccccCcccHHHHHHHHHHHHHHHHHHHHH
Q 007654 516 EAEKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTSMIMSGLCIVAVILSMIL 573 (594)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~~l 573 (594)
.+ ++..|.+.+..+++..++..+.
T Consensus 156 ~~----------------------------------~~~~~~~~~~~~~~~~~~~~~~ 179 (385)
T TIGR00710 156 LS----------------------------------WHAIFAFLSLAGILLSALIFFI 179 (385)
T ss_pred cC----------------------------------HHHHHHHHHHHHHHHHHHHHHh
Confidence 53 7888988888777766665543
No 98
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.80 E-value=7.1e-08 Score=110.87 Aligned_cols=125 Identities=15% Similarity=0.082 Sum_probs=96.2
Q ss_pred cccccHHHHhhhCCChhhHHHHHHHHhhhhhc-ccchhhhhchhhhHHHHHHHHHHHHHHHHHHHHHH--hcCC------
Q 007654 35 FGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIV--TGRA------ 105 (594)
Q Consensus 35 fS~ys~~Lk~~lg~sq~~l~~i~~a~~~G~~~-gi~~G~l~D~~gp~~~l~iG~~~~~~Gy~~~~l~~--~g~i------ 105 (594)
.+.--++++++++++.+|..++..+.++|..+ .++.|++.||++++..+.+|.++.++|-.++.+.- .+..
T Consensus 52 ~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~ 131 (633)
T TIGR00805 52 VNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTV 131 (633)
T ss_pred HHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCccccccc
Confidence 34445789999999999999999899999855 78999999999998888889988888887765431 0000
Q ss_pred ----------------------------------C--ChhHHHHHHHHHhhccccchhhhhHHHHHHHhcC-CCCCceeh
Q 007654 106 ----------------------------------P--VLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVG 148 (594)
Q Consensus 106 ----------------------------------~--~~s~~~l~~~~~l~g~G~~~~~taal~t~~k~FP-~~RG~~~G 148 (594)
. ...++.+.+.-++.|.|.+..++........|+| ++|++..|
T Consensus 132 ~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~ 211 (633)
T TIGR00805 132 SSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIG 211 (633)
T ss_pred cccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHH
Confidence 0 0123444467788899999999999999999997 56899999
Q ss_pred hhHhhhhhhHH
Q 007654 149 ILKGFAGLGGA 159 (594)
Q Consensus 149 l~~a~~GLSa~ 159 (594)
+......+|..
T Consensus 212 i~~~~~~iG~~ 222 (633)
T TIGR00805 212 ILESIAVFGPA 222 (633)
T ss_pred HHHHHHHhhhH
Confidence 88777666664
No 99
>PRK10054 putative transporter; Provisional
Probab=98.79 E-value=5.9e-08 Score=104.85 Aligned_cols=176 Identities=10% Similarity=0.037 Sum_probs=125.0
Q ss_pred cHHHHHHHHHHHhhhcchhheecchHHHH-HHhCCCcch--hHHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHH
Q 007654 360 KADFWLIFFSLLLGSGSGLTVIDNLGQMS-QSLGYDNTH--IFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVA 436 (594)
Q Consensus 360 t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~-~~~g~~~~~--~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~ 436 (594)
++++|++.+..++....--++..-+.+.. +++|.+..+ ..+++..+...++++.+|.++||++||+.. ...
T Consensus 6 ~~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~------~~~ 79 (395)
T PRK10054 6 RRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYM------LLA 79 (395)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhH------HHH
Confidence 35689888877776554444455555555 457888764 377888899999999999999999985432 222
Q ss_pred HHHHHHHHHHHhc-cCchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHHh
Q 007654 437 QFVMAIGHIFLGM-GWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYDH 515 (594)
Q Consensus 437 ~~~~~~~~ll~~~-~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~ 515 (594)
..+..++.+++.. .+...+++...+.|.+++......+..++|.++.++.++.+|+......+|.. ++|.+.+.+++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~-igp~l~~~l~~- 157 (395)
T PRK10054 80 ITAFASGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWT-VGPPLGTLLVM- 157 (395)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH-
Confidence 3333344433333 23334444556777777877888899999999999999999999998888887 58999998874
Q ss_pred hhhcccCcccccccccccccCCCCCCCCCccccCcccHHHHHHHHHHHHHHHHHHHHHHhhh
Q 007654 516 EAEKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTSMIMSGLCIVAVILSMILVHRT 577 (594)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~~l~~r~ 577 (594)
. .++.+|.+.+.++++++++..+...|.
T Consensus 158 ~----------------------------------g~~~~f~~~~~~~~i~~i~~~~~~~~~ 185 (395)
T PRK10054 158 Q----------------------------------SINLPFWLAAICSAFPLVFIQIWVQRS 185 (395)
T ss_pred h----------------------------------ccCcHHHHHHHHHHHHHHHHHHHHhcc
Confidence 2 277889988888877766655544333
No 100
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.79 E-value=1.7e-08 Score=104.92 Aligned_cols=148 Identities=18% Similarity=0.327 Sum_probs=116.5
Q ss_pred HHHHHhCCCcch--hHHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHhc-cCchhHHHHHHHH
Q 007654 386 QMSQSLGYDNTH--IFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLGM-GWPGAMYVGTLLI 462 (594)
Q Consensus 386 ~i~~~~g~~~~~--~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~~-~~~~~l~~~~~li 462 (594)
.+.+++|.+..+ ...++..+.+.++.+.+|.++||++||+ .+....++.+++.++... .+...+.+..++.
T Consensus 22 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 95 (352)
T PF07690_consen 22 YLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRR------VLIIGLLLFALGSLLLAFASNFWLLLIARFLL 95 (352)
T ss_dssp HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHH------HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred HHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCee------eEeehhhhhhhHHHHhhhhhhHHHHhhhcccc
Confidence 566677877654 3788999999999999999999998855 234444555555333222 4433788899999
Q ss_pred HhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHHhhhhcccCcccccccccccccCCCCCCC
Q 007654 463 GLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYDHEAEKQHQPHHHLLNAGSIFTSMPRVDE 542 (594)
Q Consensus 463 G~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 542 (594)
|++.|........++.|++..++.++.+++...+..+|.. ++|.+.+.+.|..+
T Consensus 96 g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~-~g~~l~~~l~~~~~------------------------- 149 (352)
T PF07690_consen 96 GIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSI-LGPLLGGFLISYFG------------------------- 149 (352)
T ss_dssp HHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHH-HHHHHHHHCCCHCH-------------------------
T ss_pred ccccccccccccccccccchhhhhhhccccccchhhhhhh-cccchhhhhhhccc-------------------------
Confidence 9999999999999999999999999999999999999997 58999998886654
Q ss_pred CCccccCcccHHHHHHHHHHHHHHHHHHHHHH
Q 007654 543 PLKCEGSICYFLTSMIMSGLCIVAVILSMILV 574 (594)
Q Consensus 543 ~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~~l~ 574 (594)
++..|.+.+.+++++.++..++.
T Consensus 150 ---------~~~~~~~~~~~~~~~~il~~~~~ 172 (352)
T PF07690_consen 150 ---------WRWAFLISAILSLIAAILFILFL 172 (352)
T ss_dssp ---------HCCHHHHHHHHHHHHHHHHHCCC
T ss_pred ---------cccccccccchhhhhhhhHhhhh
Confidence 78889999999988877544433
No 101
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.79 E-value=6.6e-08 Score=107.36 Aligned_cols=171 Identities=19% Similarity=0.271 Sum_probs=128.9
Q ss_pred HHHHHHHHHHHhhhcchhheecchHHHHHH---hCCCcch--hHHHHHHHhhhhhcccccchhhh-hhhccCCchhHHHH
Q 007654 361 ADFWLIFFSLLLGSGSGLTVIDNLGQMSQS---LGYDNTH--IFVSMISIWNFLGRVGGGYFSEI-IVRDYAYPRPVAMA 434 (594)
Q Consensus 361 ~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~~---~g~~~~~--~~Vsl~si~n~~GRl~~G~lsD~-l~r~~~~~r~~~l~ 434 (594)
+.+|.++...++-..+--++..++....++ +|.+..+ ..++.+++...++++.+|+++|| ++||+. +.
T Consensus 10 ~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~------l~ 83 (475)
T TIGR00924 10 KPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKT------MV 83 (475)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHH------HH
Confidence 457777777776555545556667777665 6777643 47899999999999999999999 788554 24
Q ss_pred HHHHHHHHHHHHHhcc-CchhHHHHHHHHHhhhhhccchhHHHHHHhhccCc---hhhhhhHHHhhhhHHHHHHHHHHHH
Q 007654 435 VAQFVMAIGHIFLGMG-WPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKK---FGALYNFLTLANPAGSLVFSGLIAS 510 (594)
Q Consensus 435 ~~~~~~~~~~ll~~~~-~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~---~g~nyg~~~~a~~~g~~~~~~~l~G 510 (594)
....+.+++++++... ....++++..+.|++.|......+++++|.|..++ -++.+++.+.+..+|+. ++|.+.|
T Consensus 84 ~~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~-ig~~l~g 162 (475)
T TIGR00924 84 LGGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSF-ISPLLAG 162 (475)
T ss_pred HHHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHH-HHHHHHH
Confidence 4455566666555443 34456678888999999999999999999998654 67789999999999998 5999999
Q ss_pred HHHHhhhhcccCcccccccccccccCCCCCCCCCccccCcccHHHHHHHHHHHHHHHHHHHH
Q 007654 511 YIYDHEAEKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTSMIMSGLCIVAVILSMI 572 (594)
Q Consensus 511 ~iyd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~~ 572 (594)
.+.|+. .|+..|.+.+..++++++.-++
T Consensus 163 ~l~~~~----------------------------------g~~~~f~~~~~~~~~~~l~~~~ 190 (475)
T TIGR00924 163 VIAENY----------------------------------GYHVGFNLAAVGMVIGLLTFFA 190 (475)
T ss_pred HHHHhc----------------------------------ChHHHHHHHHHHHHHHHHHHHH
Confidence 998865 3999999988766666544433
No 102
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=98.76 E-value=7.5e-08 Score=100.45 Aligned_cols=171 Identities=10% Similarity=-0.032 Sum_probs=122.4
Q ss_pred HHHHHHHHHhhhcchhheecchHHHHHHhCCCcch--hHHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHHHHH
Q 007654 363 FWLIFFSLLLGSGSGLTVIDNLGQMSQSLGYDNTH--IFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVM 440 (594)
Q Consensus 363 Fwll~~~~~~~~g~Gl~vi~n~~~i~~~~g~~~~~--~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~ 440 (594)
||+++...++......+....+..+.++.+.+..+ ...++..+...++.+.+|.++||++||+.. .....+.
T Consensus 1 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~------~~~~~~~ 74 (365)
T TIGR00900 1 FRLLFAAQLISLIGTAITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVM------IGADLIR 74 (365)
T ss_pred CeehHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHH------HHHHHHH
Confidence 45555555555444444444445566677776553 377889999999999999999999985532 2222222
Q ss_pred HHHHHHH-hcc-----CchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHH
Q 007654 441 AIGHIFL-GMG-----WPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYD 514 (594)
Q Consensus 441 ~~~~ll~-~~~-----~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd 514 (594)
.++.++. ... +...+++...+.|++.|.......++++|++..++.++.+|+...+..+|.. ++|.+.+.+++
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~g~~l~~~l~~ 153 (365)
T TIGR00900 75 AVLVAVLPFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYI-VGPGIGGLMYA 153 (365)
T ss_pred HHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHH-HHHHHHHHHHH
Confidence 2222221 111 4456777888899999999999999999999999999999999999999987 59999999998
Q ss_pred hhhhcccCcccccccccccccCCCCCCCCCccccCcccHHHHHHHHHHHHHHHHHHHHHH
Q 007654 515 HEAEKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTSMIMSGLCIVAVILSMILV 574 (594)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~~l~ 574 (594)
..+ ++..|.+.+..++++.++...+.
T Consensus 154 ~~g----------------------------------~~~~~~~~~~~~~~~~~~~~~~~ 179 (365)
T TIGR00900 154 TLG----------------------------------IKWAIWVDAVGFAISALLIVSVR 179 (365)
T ss_pred Hhh----------------------------------HHHHHHHHHHHHHHHHHHHHhcc
Confidence 764 78888888777666655544443
No 103
>PRK11663 regulatory protein UhpC; Provisional
Probab=98.76 E-value=1.2e-07 Score=103.73 Aligned_cols=172 Identities=15% Similarity=0.163 Sum_probs=123.9
Q ss_pred hcHHHHHHHHHHHhhhcchhheecchHHHHHHhCCCcch--hHHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHH
Q 007654 359 IKADFWLIFFSLLLGSGSGLTVIDNLGQMSQSLGYDNTH--IFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVA 436 (594)
Q Consensus 359 ~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~~~g~~~~~--~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~ 436 (594)
|..-++.+++.+++.......+.....++.+++|.+..+ ..+++..+...++++.+|+++||++||+.. .+.
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~------~~~ 94 (434)
T PRK11663 21 RRHILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFM------GIG 94 (434)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhH------HHH
Confidence 334555555555554443334444566777888988754 378899999999999999999999885532 333
Q ss_pred HHHHHHHHHHHhc-cCchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHHh
Q 007654 437 QFVMAIGHIFLGM-GWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYDH 515 (594)
Q Consensus 437 ~~~~~~~~ll~~~-~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~ 515 (594)
.++..++.++... .+...+.+.-++.|++.|..+.....++.|+|..|+.|+..|+...+..+|+. ++|.+.+.+.|.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~-~~~~~~~~l~~~ 173 (434)
T PRK11663 95 LIATGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGA-LIPLVVGAIALH 173 (434)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHc
Confidence 4444444444332 23344555666789999999999999999999988999999999999999988 589999999875
Q ss_pred hhhcccCcccccccccccccCCCCCCCCCccccCcccHHHHHHHHHHHHHHHHHHH
Q 007654 516 EAEKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTSMIMSGLCIVAVILSM 571 (594)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~ 571 (594)
.+ +|..|.+.+..+++..++..
T Consensus 174 ~g----------------------------------w~~~f~~~~i~~~~~~~~~~ 195 (434)
T PRK11663 174 YG----------------------------------WRYGMMIAGIIAIVVGLFLC 195 (434)
T ss_pred cc----------------------------------HHHHHHHHHHHHHHHHHHHH
Confidence 43 89999988776665444333
No 104
>PRK10091 MFS transport protein AraJ; Provisional
Probab=98.76 E-value=1.2e-07 Score=101.66 Aligned_cols=170 Identities=12% Similarity=0.110 Sum_probs=131.8
Q ss_pred cHHHHHHHHHHHhhhcchhheecchHHHHHHhCCCcch--hHHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHH
Q 007654 360 KADFWLIFFSLLLGSGSGLTVIDNLGQMSQSLGYDNTH--IFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQ 437 (594)
Q Consensus 360 t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~~~g~~~~~--~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~ 437 (594)
++.+|.+....++......++...+.++.++.|.+.++ ..++...++..++++.+|+++||++||+.. ....
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~------~~~~ 75 (382)
T PRK10091 2 KKVILSLALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHIL------LFLV 75 (382)
T ss_pred cchHHHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHH------HHHH
Confidence 35678777777766666566777778888899988654 488999999999999999999999885532 3334
Q ss_pred HHHHHHHHHHh-ccCchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHHhh
Q 007654 438 FVMAIGHIFLG-MGWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYDHE 516 (594)
Q Consensus 438 ~~~~~~~ll~~-~~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~ 516 (594)
.+..++.++.. ..+...+++.-++.|++.|......+.++.|++..++.++..++...+..+|.. ++|.+.+.+.|..
T Consensus 76 ~~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~g~~l~~~l~~~~ 154 (382)
T PRK10091 76 ALCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANL-LGIPLGTYLSQEF 154 (382)
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHH-HhccHHHHHhhhc
Confidence 44444444433 344567888889999999999999999999999988899999999888888887 4888988888754
Q ss_pred hhcccCcccccccccccccCCCCCCCCCccccCcccHHHHHHHHHHHHHHHHHH
Q 007654 517 AEKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTSMIMSGLCIVAVILS 570 (594)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls 570 (594)
+ +|.+|.+.+..+++..+..
T Consensus 155 g----------------------------------wr~~f~~~~~~~~~~~~~~ 174 (382)
T PRK10091 155 S----------------------------------WRYTFLLIAVFNIAVLASI 174 (382)
T ss_pred c----------------------------------HHHHHHHHHHHHHHHHHHH
Confidence 3 8899999888776665543
No 105
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.74 E-value=1.4e-07 Score=105.38 Aligned_cols=177 Identities=17% Similarity=0.223 Sum_probs=123.3
Q ss_pred HHHhhcH-HHHHHHHHHHhhhcchhheecchHHHH-HHhCCCcchh--HHHHHHHhhhhhcccccchhhh-hhhccCCch
Q 007654 355 TQALIKA-DFWLIFFSLLLGSGSGLTVIDNLGQMS-QSLGYDNTHI--FVSMISIWNFLGRVGGGYFSEI-IVRDYAYPR 429 (594)
Q Consensus 355 ~e~l~t~-~Fwll~~~~~~~~g~Gl~vi~n~~~i~-~~~g~~~~~~--~Vsl~si~n~~GRl~~G~lsD~-l~r~~~~~r 429 (594)
.+.+|++ .+|.++...++...+--.+...+.... +++|.+..+. .++.+........+++|+++|| ++||+.
T Consensus 14 ~~~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~--- 90 (500)
T PRK09584 14 LNAFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRV--- 90 (500)
T ss_pred hhhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHH---
Confidence 3566777 499999888877655444555555555 5688876533 4444554545555789999999 588553
Q ss_pred hHHHHHHHHHHHHHHHHHhcc--CchhHHHHHHHHHhhhhhccchhHHHHHHhhccCc--hhhhhhHHHhhhhHHHHHHH
Q 007654 430 PVAMAVAQFVMAIGHIFLGMG--WPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKK--FGALYNFLTLANPAGSLVFS 505 (594)
Q Consensus 430 ~~~l~~~~~~~~~~~ll~~~~--~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~--~g~nyg~~~~a~~~g~~~~~ 505 (594)
+.....+..++.+++... ....++++.++.|++.|......+.+++|.|..++ .+..+++.+.+..+|+. ++
T Consensus 91 ---~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~-~g 166 (500)
T PRK09584 91 ---IMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSF-FS 166 (500)
T ss_pred ---HHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHH-HH
Confidence 234444555555444332 23346667788899999999999999999997543 44578888888889988 59
Q ss_pred HHHHHHHHHhhhhcccCcccccccccccccCCCCCCCCCccccCcccHHHHHHHHHHHHHHHHHHHH
Q 007654 506 GLIASYIYDHEAEKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTSMIMSGLCIVAVILSMI 572 (594)
Q Consensus 506 ~~l~G~iyd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~~ 572 (594)
|.+.|++.|+.+ |+..|.+.++..+++++..+.
T Consensus 167 p~i~g~l~~~~g----------------------------------~~~~F~i~~i~~~i~~i~~~~ 199 (500)
T PRK09584 167 MLATPWLAAKYG----------------------------------WSVAFALSVVGMLITVVNFAF 199 (500)
T ss_pred HHHHHHHHHhhC----------------------------------HHHHHHHHHHHHHHHHHHHHH
Confidence 999999998653 999999987766666554444
No 106
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.74 E-value=6.2e-06 Score=89.78 Aligned_cols=160 Identities=16% Similarity=0.224 Sum_probs=103.5
Q ss_pred CHHHHhhcHHHHHHHHHHHhhhcchhheecchHHH-HHHhC-CCcchhHHHHHHHhhhhhcccccchhhhhhhccCCchh
Q 007654 353 TLTQALIKADFWLIFFSLLLGSGSGLTVIDNLGQM-SQSLG-YDNTHIFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRP 430 (594)
Q Consensus 353 t~~e~l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i-~~~~g-~~~~~~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~ 430 (594)
+.++++|+|+++...+..++ .+......++..++ .+++| .+... .-.+.+ .+.+.-+..=.+++|+.||.+..+
T Consensus 199 ~~~~llk~~~~~~Fll~~~l-~~~~~~~~~~f~~~yl~~~gg~~~~~-~g~~~~-l~~~aEi~~f~~~~~~~~r~g~~~- 274 (400)
T PF03825_consen 199 DALKLLKNPRFLVFLLAAFL-IGISHAAYYTFFSIYLQELGGYSGST-IGILWA-LGVVAEIPFFFFSGRFLKRFGIKW- 274 (400)
T ss_pred HHHHHhcCccHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcccchhhH-HHHHHH-HHHHHHHHHHHHHHHHHHhcCHHH-
Confidence 34679999999876655544 45555555555554 67777 33332 112223 334567777788899988887532
Q ss_pred HHHHHHHHHHHHHHHHHhcc-CchhHHHH-----HHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHH-hhhhHHHHH
Q 007654 431 VAMAVAQFVMAIGHIFLGMG-WPGAMYVG-----TLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLT-LANPAGSLV 503 (594)
Q Consensus 431 ~~l~~~~~~~~~~~ll~~~~-~~~~l~~~-----~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~-~a~~~g~~~ 503 (594)
.+.++.+..++=..+++.. ++...... -.+=|++||..+......+.+....+.-++-.++.. +..++|..
T Consensus 275 -ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~- 352 (400)
T PF03825_consen 275 -LLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGA- 352 (400)
T ss_pred -HHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHH-
Confidence 2233333333323333333 33222222 234599999999999999999998777788888765 45788887
Q ss_pred HHHHHHHHHHHhhhh
Q 007654 504 FSGLIASYIYDHEAE 518 (594)
Q Consensus 504 ~~~~l~G~iyd~~~~ 518 (594)
++..+.|++||+.+.
T Consensus 353 iG~~igG~l~~~~g~ 367 (400)
T PF03825_consen 353 IGSLIGGWLYDAFGA 367 (400)
T ss_pred HHHHHHHHHHHHhcc
Confidence 488999999999873
No 107
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.74 E-value=1.7e-07 Score=101.95 Aligned_cols=156 Identities=11% Similarity=0.039 Sum_probs=117.5
Q ss_pred chhheecchHHHHHHhCCCcch--hHHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHhc-cCc
Q 007654 376 SGLTVIDNLGQMSQSLGYDNTH--IFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLGM-GWP 452 (594)
Q Consensus 376 ~Gl~vi~n~~~i~~~~g~~~~~--~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~~-~~~ 452 (594)
+..++...+.+|.++++.+... ..++++.++.+++++.+|.++||++||+.. .....+..++.++... .+.
T Consensus 31 ~~~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l------~~~~~~~~~~~~~~~~a~~~ 104 (413)
T PRK15403 31 TTDLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVL------ITGALIFTLACAATLFTTSM 104 (413)
T ss_pred HHHhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHH------HHHHHHHHHHHHHHHHcCCH
Confidence 4556666777888899887653 488999999999999999999999985532 2233444444443333 344
Q ss_pred hhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHHhhhhcccCcccccccccc
Q 007654 453 GAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYDHEAEKQHQPHHHLLNAGS 532 (594)
Q Consensus 453 ~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~~~~~~~~~~~~~~~~~ 532 (594)
..++++-++.|++.|........++.|.|..++-++..++...+..+|.. ++|.+.+.+.|..+
T Consensus 105 ~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~lg~~l~~~~g--------------- 168 (413)
T PRK15403 105 TQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPI-IGPLSGAALMHFVH--------------- 168 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcC---------------
Confidence 56777888889988776667778899999988899999999998888887 58888888776532
Q ss_pred cccCCCCCCCCCccccCcccHHHHHHHHHHHHHHHHHHHH
Q 007654 533 IFTSMPRVDEPLKCEGSICYFLTSMIMSGLCIVAVILSMI 572 (594)
Q Consensus 533 ~~~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~~ 572 (594)
+|..|.+.++..+++.++..+
T Consensus 169 -------------------w~~~f~~~~~~~~i~~~~~~~ 189 (413)
T PRK15403 169 -------------------WKVLFAIIAVMGLIAFVGLLL 189 (413)
T ss_pred -------------------HHHHHHHHHHHHHHHHHHHHH
Confidence 899999988877777655443
No 108
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.71 E-value=2.7e-11 Score=132.10 Aligned_cols=106 Identities=23% Similarity=0.191 Sum_probs=78.5
Q ss_pred hhHHHHHHHHhhhhhc-ccchhhhhchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCC-hhHHHHHHHHHhhccccchhh
Q 007654 51 KQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPV-LPLWAMCILIFVGNNGETYFN 128 (594)
Q Consensus 51 ~~l~~i~~a~~~G~~~-gi~~G~l~D~~gp~~~l~iG~~~~~~Gy~~~~l~~~g~i~~-~s~~~l~~~~~l~g~G~~~~~ 128 (594)
.+...+.....+|..+ +++.|.+.||+|+|.++.++.++..+|..+.. ..+. .+++.+++.-++.|.|.+..+
T Consensus 46 ~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~-----~~~~~~~~~~~~~~R~~~G~~~g~~~ 120 (451)
T PF00083_consen 46 LLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIA-----FAPSYNNFWMLLIGRFLIGFGIGGAY 120 (451)
T ss_pred HHHHHHHHHHHhhhccccccccccccccccccccccccccccccccccc-----cccccccccccccccccccccccccc
Confidence 3456677888888876 67899999999999999999998878877542 2220 145666666667778888776
Q ss_pred hhHHHHHHHhcC-CCCCceehhhHhhhhhhHHHH
Q 007654 129 TAALVSCVQNFP-KSRGPVVGILKGFAGLGGAIL 161 (594)
Q Consensus 129 taal~t~~k~FP-~~RG~~~Gl~~a~~GLSa~i~ 161 (594)
+.......+.=| ++||....+.-.++.+|..+-
T Consensus 121 ~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~ 154 (451)
T PF00083_consen 121 VVSPIYISEIAPPKHRGFLSSLFQLFWALGILLA 154 (451)
T ss_pred cccccccccccccccccccccccccccccccccc
Confidence 666666666666 579999999988887776443
No 109
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=98.70 E-value=2.8e-07 Score=95.13 Aligned_cols=170 Identities=22% Similarity=0.372 Sum_probs=125.8
Q ss_pred HHHHHHHHhhhcchhheecchHHHHHHhCCCcch--hHHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHHHHHH
Q 007654 364 WLIFFSLLLGSGSGLTVIDNLGQMSQSLGYDNTH--IFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMA 441 (594)
Q Consensus 364 wll~~~~~~~~g~Gl~vi~n~~~i~~~~g~~~~~--~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~ 441 (594)
|.+....++..............+.++.+.+..+ ...++..+...++++.+|.++||++||+. +.....+..
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~------~~~~~~~~~ 75 (352)
T cd06174 2 LLLFLGFFLSGLDRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRV------LLLGLLLFA 75 (352)
T ss_pred HHHHHHHHHHHHhhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchh------hHHHHHHHH
Confidence 4454544444433334444455566677777654 36788999999999999999999988663 234444445
Q ss_pred HHHHHHhc-cCchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHHhhhhcc
Q 007654 442 IGHIFLGM-GWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYDHEAEKQ 520 (594)
Q Consensus 442 ~~~ll~~~-~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~~~~~ 520 (594)
++.++... .+...+++...+.|++.|..+...+.++.|++..|+.++.+++......+|.. ++|.+.+.+.|..+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~--- 151 (352)
T cd06174 76 LGSLLLAFASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGAL-LGPLLGGLLAESLG--- 151 (352)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHH-HHHHHHHHHHHHhh---
Confidence 55444332 34556778888999999999999999999999999999999999999999988 58999999988653
Q ss_pred cCcccccccccccccCCCCCCCCCccccCcccHHHHHHHHHHHHHHHHHHHHHH
Q 007654 521 HQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTSMIMSGLCIVAVILSMILV 574 (594)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~~l~ 574 (594)
++..|.+.+...+++.++...+.
T Consensus 152 -------------------------------~~~~~~~~~~~~~~~~~~~~~~~ 174 (352)
T cd06174 152 -------------------------------WRWLFLILAILGLLLALLLLFLL 174 (352)
T ss_pred -------------------------------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 77788888777777666655443
No 110
>PRK03699 putative transporter; Provisional
Probab=98.66 E-value=3.4e-07 Score=98.53 Aligned_cols=171 Identities=12% Similarity=0.153 Sum_probs=126.2
Q ss_pred HHHHHHHHHHHhhhcchhheecchHHHHHHhCCCcch--hHHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHHH
Q 007654 361 ADFWLIFFSLLLGSGSGLTVIDNLGQMSQSLGYDNTH--IFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQF 438 (594)
Q Consensus 361 ~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~~~g~~~~~--~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~ 438 (594)
+-+|..++.+++..+.-.+.-..+.++.++++.+..+ ...++..+...+|++.+|+++||++||+.. ....+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~------~~~~~ 80 (394)
T PRK03699 7 KLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQL------IFGFA 80 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH------HHHHH
Confidence 5677777777766665555555677888888988764 377889999999999999999999986532 33334
Q ss_pred HHHHHHHHHhc-cCchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHHhhh
Q 007654 439 VMAIGHIFLGM-GWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYDHEA 517 (594)
Q Consensus 439 ~~~~~~ll~~~-~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~~ 517 (594)
+..++.++... .+...+++...+.|++.|..+......+.|.|..|+-+...++......+|+.+ +|.+.+.+.+.+.
T Consensus 81 ~~~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~-~~~~~~~l~~~~~ 159 (394)
T PRK03699 81 LMILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMI-FPIIAAYLLARSI 159 (394)
T ss_pred HHHHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHH-HHHHHHHHHhccc
Confidence 44444444333 334456777888999999999999999999998888888888887788888774 7888888765432
Q ss_pred hcccCcccccccccccccCCCCCCCCCccccCcccHHHHHHHHHHHHHHHHHHH
Q 007654 518 EKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTSMIMSGLCIVAVILSM 571 (594)
Q Consensus 518 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~ 571 (594)
-+|..|.+.+.++++..++.+
T Consensus 160 ---------------------------------gw~~~f~~~~~~~~~~~~~~~ 180 (394)
T PRK03699 160 ---------------------------------EWYWVYACIGLVYVAIFILTL 180 (394)
T ss_pred ---------------------------------cHHHHHHHHHHHHHHHHHHHH
Confidence 388999988777666554433
No 111
>TIGR00893 2A0114 d-galactonate transporter.
Probab=98.64 E-value=1.4e-07 Score=98.79 Aligned_cols=148 Identities=16% Similarity=0.200 Sum_probs=114.2
Q ss_pred HHHHHHhCCCcch--hHHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHh-ccCchhHHHHHHH
Q 007654 385 GQMSQSLGYDNTH--IFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLG-MGWPGAMYVGTLL 461 (594)
Q Consensus 385 ~~i~~~~g~~~~~--~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~-~~~~~~l~~~~~l 461 (594)
..+.+++|.++.+ ...++..+.+.++.+.+|+++||++||+.. .....+..++.++.. ..+...+++.-.+
T Consensus 18 ~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 91 (399)
T TIGR00893 18 PMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTL------AVFIVIWGVFTGLQAFAGAYVSLYILRVL 91 (399)
T ss_pred HHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceee------HHHHHHHHHHHHHHHHHcCHHHHHHHHHH
Confidence 3455677887654 478899999999999999999999986654 222333333333332 2345567788899
Q ss_pred HHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHHhhhhcccCcccccccccccccCCCCCC
Q 007654 462 IGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYDHEAEKQHQPHHHLLNAGSIFTSMPRVD 541 (594)
Q Consensus 462 iG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (594)
.|++.|..+...+.+++|++..|+-++..++......+|.. ++|.+.+.+.|..+
T Consensus 92 ~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~-~~~~~~~~l~~~~~------------------------ 146 (399)
T TIGR00893 92 LGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGI-IGGPLVGWILIHFS------------------------ 146 (399)
T ss_pred HHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHH-HHHHHHHHHHHhCC------------------------
Confidence 99999999999999999999999999999999999999887 58889998887543
Q ss_pred CCCccccCcccHHHHHHHHHHHHHHHHHHHHH
Q 007654 542 EPLKCEGSICYFLTSMIMSGLCIVAVILSMIL 573 (594)
Q Consensus 542 ~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~~l 573 (594)
++..|.+.+..+++..++....
T Consensus 147 ----------~~~~~~~~~~~~~~~~~~~~~~ 168 (399)
T TIGR00893 147 ----------WQWAFIIEGVLGIIWGVLWLKF 168 (399)
T ss_pred ----------chHHHHHHHHHHHHHHHHhhhe
Confidence 8889998888777666655543
No 112
>PRK09528 lacY galactoside permease; Reviewed
Probab=98.64 E-value=1.5e-07 Score=102.07 Aligned_cols=177 Identities=14% Similarity=0.175 Sum_probs=112.2
Q ss_pred HHhhcHHHHHHHHHHHhhhcchhheecchHHHHHH-hCCCcchh--HHHHHHHhhhhhcccccchhhhhhhccCCchhHH
Q 007654 356 QALIKADFWLIFFSLLLGSGSGLTVIDNLGQMSQS-LGYDNTHI--FVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVA 432 (594)
Q Consensus 356 e~l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~~-~g~~~~~~--~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~ 432 (594)
++.|+++||.+++.+++...+--.+...+....++ +|++..+. .+++..+...++++.+|+++||++||+.. .
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~----~ 80 (420)
T PRK09528 5 YYLKNPNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHL----L 80 (420)
T ss_pred hhhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHH----H
Confidence 46788999999988887766544455555555555 78887644 89999999999999999999999985542 1
Q ss_pred HHHHHHHHHHHHHHH-hcc---C-c--hhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHH
Q 007654 433 MAVAQFVMAIGHIFL-GMG---W-P--GAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFS 505 (594)
Q Consensus 433 l~~~~~~~~~~~ll~-~~~---~-~--~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~ 505 (594)
..........+.+.. ... . . ....++.++.|.++.......+..+.+ + .++.|..||.......+|.. ++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~g~~~g~~~~~~~~g~~-i~ 157 (420)
T PRK09528 81 WIISGLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIER-V-SRRSGFEYGRARMWGSLGWA-LC 157 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHH-H-HhhccccchhhHHhhhHHHH-HH
Confidence 111111111111111 100 0 0 112233444455555555556565543 3 35678888888877778877 48
Q ss_pred HHHHHHHHHhhhhcccCcccccccccccccCCCCCCCCCccccCcccHHHHHHHHHHHHHHHHHHHHHH
Q 007654 506 GLIASYIYDHEAEKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTSMIMSGLCIVAVILSMILV 574 (594)
Q Consensus 506 ~~l~G~iyd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~~l~ 574 (594)
|.+.|.++|.+ ++..|++.+.++++++++.+.+.
T Consensus 158 ~~~~g~l~~~~-----------------------------------~~~~f~~~~~~~~~~~~~~~~~~ 191 (420)
T PRK09528 158 AFIAGILFNIN-----------------------------------PQINFWLGSGSALILLVLLFFAK 191 (420)
T ss_pred HHHHHHHHhcC-----------------------------------chHhHHHHHHHHHHHHHHHhccc
Confidence 89999998741 46778887777776665554443
No 113
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.63 E-value=1.5e-05 Score=86.55 Aligned_cols=184 Identities=17% Similarity=0.214 Sum_probs=115.4
Q ss_pred HHHHhhcHHHHHHHHHHHhhhcchhheecchHHHH-HHhCCCcc---h---hHHHHHHHhhhhhcccccchhhhhhhccC
Q 007654 354 LTQALIKADFWLIFFSLLLGSGSGLTVIDNLGQMS-QSLGYDNT---H---IFVSMISIWNFLGRVGGGYFSEIIVRDYA 426 (594)
Q Consensus 354 ~~e~l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~-~~~g~~~~---~---~~Vsl~si~n~~GRl~~G~lsD~l~r~~~ 426 (594)
..+.+|+++||.+.+ +.+++.+--.+..|--++. ++.-.+.. + ...|+=-+..+..=.++.++-+|++.|+.
T Consensus 213 ~~~l~k~~~fw~~~l-~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~ 291 (412)
T PF01306_consen 213 VLSLFKMRNFWFFVL-FVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNL 291 (412)
T ss_dssp HHHHTTSHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH
T ss_pred HHHHhcchhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhH
Confidence 356789999998644 5555554444444333333 22222221 1 13444445555555556666666655332
Q ss_pred CchhHHHHHHHHHHHHHHHHHh-ccCchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHH-HhhhhHHHHHH
Q 007654 427 YPRPVAMAVAQFVMAIGHIFLG-MGWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFL-TLANPAGSLVF 504 (594)
Q Consensus 427 ~~r~~~l~~~~~~~~~~~ll~~-~~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~-~~a~~~g~~~~ 504 (594)
+.++..++.+=.+... ..++..+.+.=.+=|+.++...--.==.+++.|..|-.++.|.+- ..+..+|..++
T Consensus 292 ------Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~ 365 (412)
T PF01306_consen 292 ------LLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIIL 365 (412)
T ss_dssp ------HHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHH
T ss_pred ------HHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHH
Confidence 2333444444333333 344555666667778887776666666788999988889999886 47788888875
Q ss_pred HHHHHHHHHHhhhhcccCcccccccccccccCCCCCCCCCccccCcccHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 007654 505 SGLIASYIYDHEAEKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTSMIMSGLCIVAVILSMILVHRTTN 579 (594)
Q Consensus 505 ~~~l~G~iyd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~~l~~r~r~ 579 (594)
+.++|.+||+-| |+.+|.+++++.+..++++..+.+++|+
T Consensus 366 -s~~~G~lyd~~G----------------------------------~~~tylimg~iv~~~~li~~f~l~~~~~ 405 (412)
T PF01306_consen 366 -SPLAGYLYDRIG----------------------------------FQHTYLIMGLIVLPFTLISAFTLKKDKK 405 (412)
T ss_dssp -HHHHHHHHHHHH----------------------------------HHHHHHHHHHHHHHHHHHHHHHS--SSS
T ss_pred -hhhHHhhHhhcC----------------------------------cHHHHHHHHHHHHHHHHHheeeecCCCc
Confidence 569999999997 8999999999888888888887766654
No 114
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.63 E-value=0.00018 Score=80.42 Aligned_cols=129 Identities=16% Similarity=0.079 Sum_probs=81.5
Q ss_pred cccccccccH-HHHhhhCCChhhHHHHHHHHhhhhh-cccchhhhhchh-hhHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 007654 31 IGYLFGSISP-VIKSSLNYNQKQIARLGVAKDLGDS-VGFLAGSLCEVL-PIWGALLVGALQNFIGYGWVWLIVTGRAPV 107 (594)
Q Consensus 31 t~Y~fS~ys~-~Lk~~lg~sq~~l~~i~~a~~~G~~-~gi~~G~l~D~~-gp~~~l~iG~~~~~~Gy~~~~l~~~g~i~~ 107 (594)
+.|.+..+-+ -+.+++|+++++...+........+ ..+++|.+.||+ |+|.++.+|.++..+|+.++. ..+. .
T Consensus 24 s~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~--~~~~--~ 99 (493)
T PRK15462 24 SFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLG--ASEI--H 99 (493)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHH--Hhhc--c
Confidence 4565544433 4577899999999987444445544 467999999999 999999999999999987543 2111 1
Q ss_pred hhHHHHHHHHHhhccccchhhhhHHHHHHHhcCC---CCCceehhhHhhhhhhHHHHHHHH
Q 007654 108 LPLWAMCILIFVGNNGETYFNTAALVSCVQNFPK---SRGPVVGILKGFAGLGGAILTQVY 165 (594)
Q Consensus 108 ~s~~~l~~~~~l~g~G~~~~~taal~t~~k~FP~---~RG~~~Gl~~a~~GLSa~i~s~i~ 165 (594)
.....+.... ...|.+...+..-....+.||+ +|+.+.++.-....+++.+-..+.
T Consensus 100 ~~~~~l~l~l--i~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~ 158 (493)
T PRK15462 100 PSFLYLSLAI--IVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIAC 158 (493)
T ss_pred hhHHHHHHHH--HHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHH
Confidence 1122212112 2233444333333445688985 488888888777777765444443
No 115
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=98.63 E-value=7.1e-07 Score=96.14 Aligned_cols=171 Identities=11% Similarity=-0.017 Sum_probs=122.1
Q ss_pred cHHHHHHHHHHHhhhc----chhheecchHHHHHHhCCCcch--hHHHHHHHhhhhhcccccchhhhhhhccCCchhHHH
Q 007654 360 KADFWLIFFSLLLGSG----SGLTVIDNLGQMSQSLGYDNTH--IFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAM 433 (594)
Q Consensus 360 t~~Fwll~~~~~~~~g----~Gl~vi~n~~~i~~~~g~~~~~--~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l 433 (594)
++++|++.+.+.+... +.-++...+.++.++++.+... ..++...+...++.+..|.++||++||+..
T Consensus 8 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l------ 81 (406)
T PRK15402 8 GRQALLFPLCLVLFEFATYIANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVM------ 81 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHH------
Confidence 3677777776666654 3444555667788888888654 377899999999999999999999885432
Q ss_pred HHHHHHHHHHHHHHh-ccCchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHH
Q 007654 434 AVAQFVMAIGHIFLG-MGWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYI 512 (594)
Q Consensus 434 ~~~~~~~~~~~ll~~-~~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~i 512 (594)
.....+..++.++.. ..+...+++...+.|++.|......+..+.|.|..++-++..++......++.. ++|.+.+.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~i~~~l 160 (406)
T PRK15402 82 LAGVAFFILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPL-LGPLVGAAL 160 (406)
T ss_pred HHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 233333344433332 334456777888889999988888899999999877767767777666666665 588888888
Q ss_pred HHhhhhcccCcccccccccccccCCCCCCCCCccccCcccHHHHHHHHHHHHHHHHHHH
Q 007654 513 YDHEAEKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTSMIMSGLCIVAVILSM 571 (594)
Q Consensus 513 yd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~ 571 (594)
.|.. .++..|.+.+++++++.+...
T Consensus 161 ~~~~----------------------------------~w~~~~~~~~~~~~~~~~~~~ 185 (406)
T PRK15402 161 IHVL----------------------------------PWRGMFVLFAALAALSFFGLW 185 (406)
T ss_pred HHcc----------------------------------CccHHHHHHHHHHHHHHHHHH
Confidence 7744 378889888887777655443
No 116
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.63 E-value=3.6e-06 Score=92.48 Aligned_cols=128 Identities=13% Similarity=0.013 Sum_probs=99.3
Q ss_pred CcccccccccHHHHhhhCCChhh-HHHHHHHHhhhh-hcccchhhhhchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 007654 30 GIGYLFGSISPVIKSSLNYNQKQ-IARLGVAKDLGD-SVGFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPV 107 (594)
Q Consensus 30 Gt~Y~fS~ys~~Lk~~lg~sq~~-l~~i~~a~~~G~-~~gi~~G~l~D~~gp~~~l~iG~~~~~~Gy~~~~l~~~g~i~~ 107 (594)
----..++-.|.|++.+|+|.+| .+.|..+...+= .+-+++|++.||+|+|.++.++.+...+-..++..+
T Consensus 40 e~R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa------- 112 (511)
T TIGR00806 40 QFRPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLG------- 112 (511)
T ss_pred HhhchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH-------
Confidence 33445677789999999999999 777755555554 458899999999999999999988766655554321
Q ss_pred hhHHHHHHHHHhhccccchhhhhHHHHHHHhcC-CCCCceehhhHhhhhhhHHHHHHHH
Q 007654 108 LPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVY 165 (594)
Q Consensus 108 ~s~~~l~~~~~l~g~G~~~~~taal~t~~k~FP-~~RG~~~Gl~~a~~GLSa~i~s~i~ 165 (594)
.+++.|.+.=++-|.+.+... +......+||| ++||+++|+..++.-+|.++-..+.
T Consensus 113 ~Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ 170 (511)
T TIGR00806 113 TSVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLG 170 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 246777766667777888777 99999999998 5699999999999888887766554
No 117
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.62 E-value=5e-07 Score=95.79 Aligned_cols=156 Identities=15% Similarity=0.192 Sum_probs=120.4
Q ss_pred hhheecchHHHHHHhCCCcchh--HHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHh-ccCch
Q 007654 377 GLTVIDNLGQMSQSLGYDNTHI--FVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLG-MGWPG 453 (594)
Q Consensus 377 Gl~vi~n~~~i~~~~g~~~~~~--~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~-~~~~~ 453 (594)
.-++...+.++.+++|.++.+. ..++..+...++++.+|.++||++||+. +.....+..++.++.. ..+..
T Consensus 7 ~~~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~------~~~~~~~~~i~~~~~~~~~~~~ 80 (377)
T PRK11102 7 IDMYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPV------ILGGTLVFALAAVACALAQTID 80 (377)
T ss_pred HHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHH------HHHHHHHHHHHHHHHHHHccHH
Confidence 3445567778888999887643 7789999999999999999999987442 2333444444443333 23445
Q ss_pred hHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHHhhhhcccCccccccccccc
Q 007654 454 AMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYDHEAEKQHQPHHHLLNAGSI 533 (594)
Q Consensus 454 ~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~~~~~~~~~~~~~~~~~~ 533 (594)
.+++...+.|++.|........++.|.+..++.++..++......+|.. ++|.+.+.+.|..+
T Consensus 81 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~l~~~~~---------------- 143 (377)
T PRK11102 81 QLIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPL-LAPIIGGWLLVWFS---------------- 143 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHcC----------------
Confidence 6777888899999999999999999999999999999999999888887 58999999988654
Q ss_pred ccCCCCCCCCCccccCcccHHHHHHHHHHHHHHHHHHHHH
Q 007654 534 FTSMPRVDEPLKCEGSICYFLTSMIMSGLCIVAVILSMIL 573 (594)
Q Consensus 534 ~~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~~l 573 (594)
++..|.+.+.++++..++..+.
T Consensus 144 ------------------~~~~~~~~~~~~~~~~~~~~~~ 165 (377)
T PRK11102 144 ------------------WHAIFWVLALAAILAAALVFFF 165 (377)
T ss_pred ------------------hHHHHHHHHHHHHHHHHHHHHh
Confidence 7888988888877766655543
No 118
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.62 E-value=9.8e-07 Score=96.49 Aligned_cols=153 Identities=13% Similarity=0.108 Sum_probs=110.5
Q ss_pred chHHHHHHhCCCcch--hHHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHhc-----cCchhH
Q 007654 383 NLGQMSQSLGYDNTH--IFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLGM-----GWPGAM 455 (594)
Q Consensus 383 n~~~i~~~~g~~~~~--~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~~-----~~~~~l 455 (594)
...|..++.|.+..+ ...++..++..++.+.+|+++||++||+.. .....+.+++.++... .+...+
T Consensus 48 ~~~p~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~l 121 (438)
T TIGR00712 48 LAMPYLVEQGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFL------PAGLILSAAVMLLMGFVPWATSSIAIM 121 (438)
T ss_pred hhhHHHHHcCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceeh------HHHHHHHHHHHHHHhccccccchHHHH
Confidence 344566667877654 377899999999999999999999986533 2233333334333221 122245
Q ss_pred HHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHHhhhhcccCccccccccccccc
Q 007654 456 YVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYDHEAEKQHQPHHHLLNAGSIFT 535 (594)
Q Consensus 456 ~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~~~~~~~~~~~~~~~~~~~~ 535 (594)
++.-.+.|++.|..+......+.|+|..|+.|+..|+..++..+|+.+ ++.+.+...+.+.
T Consensus 122 ~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~-~~~l~~~~~~~~~------------------ 182 (438)
T TIGR00712 122 FVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGI-PPLLVLLGMAWFN------------------ 182 (438)
T ss_pred HHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHH-HHHHHHHHHHHhh------------------
Confidence 566678899999999988999999999999999999999888888874 6767776555332
Q ss_pred CCCCCCCCCccccCcccHHHHHHHHHHHHHHHHHHHHHHh
Q 007654 536 SMPRVDEPLKCEGSICYFLTSMIMSGLCIVAVILSMILVH 575 (594)
Q Consensus 536 ~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~~l~~ 575 (594)
-+|.+|++.+..+++..++..++.+
T Consensus 183 ---------------~w~~~f~~~~~~~~i~~~~~~~~~~ 207 (438)
T TIGR00712 183 ---------------DWHAALYFPAICAIIVALFAFAMMR 207 (438)
T ss_pred ---------------hhHHHHHHHHHHHHHHHHHHHHhcc
Confidence 3899999998888887666655443
No 119
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.62 E-value=8.8e-07 Score=94.95 Aligned_cols=170 Identities=11% Similarity=0.128 Sum_probs=123.6
Q ss_pred HHHHHHHHHHHhhhcchhheecchHHHHHHhCCCcchh--HHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHHH
Q 007654 361 ADFWLIFFSLLLGSGSGLTVIDNLGQMSQSLGYDNTHI--FVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQF 438 (594)
Q Consensus 361 ~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~~~g~~~~~~--~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~ 438 (594)
+..|++....+++.....+++....++.++++.++.+. ..++..+...++.+.+|.++||++||+.. .....
T Consensus 8 ~~l~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~------~~~~~ 81 (394)
T PRK11652 8 NLLFMLVLLVAVGQMAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVI------LVGMS 81 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHH------HHHHH
Confidence 34455555666666555566667788889999887643 78899999999999999999999885532 22333
Q ss_pred HHHHHHHHHh-ccCchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHHhhh
Q 007654 439 VMAIGHIFLG-MGWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYDHEA 517 (594)
Q Consensus 439 ~~~~~~ll~~-~~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~~ 517 (594)
+..++.++.. ..+...+++..++.|++.|........++.|.+..++.+...++...+..++.. ++|.+.+.+.|..+
T Consensus 82 ~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~i~~~l~~~~g 160 (394)
T PRK11652 82 IFILGTLVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPL-LAPLIGGLLTTLFG 160 (394)
T ss_pred HHHHHHHHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhccC
Confidence 3344433332 234456777888889999888777788899999888899999988888888776 58989988877543
Q ss_pred hcccCcccccccccccccCCCCCCCCCccccCcccHHHHHHHHHHHHHHHHHHH
Q 007654 518 EKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTSMIMSGLCIVAVILSM 571 (594)
Q Consensus 518 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~ 571 (594)
++.+|.+.+..+++..++..
T Consensus 161 ----------------------------------~~~~f~~~~~~~~~~~~~~~ 180 (394)
T PRK11652 161 ----------------------------------WRACYLFLLLLGAGVTFSMA 180 (394)
T ss_pred ----------------------------------hHHHHHHHHHHHHHHHHHHH
Confidence 88899887766655444433
No 120
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.61 E-value=2.1e-05 Score=87.55 Aligned_cols=187 Identities=18% Similarity=0.254 Sum_probs=134.5
Q ss_pred CHHHHhhcHHHHHHHHHHHhhhcchhheecchHHHH-H-HhCCCcchh--HHHHHHHhhhhhcccccchhhhhhhccCCc
Q 007654 353 TLTQALIKADFWLIFFSLLLGSGSGLTVIDNLGQMS-Q-SLGYDNTHI--FVSMISIWNFLGRVGGGYFSEIIVRDYAYP 428 (594)
Q Consensus 353 t~~e~l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~-~-~~g~~~~~~--~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~ 428 (594)
|++++-|.++.+...++.++-. -|+..+..++.+. + .+|++..+. ..-+..+....|-+++|++.||++.|.+
T Consensus 273 t~k~~~~~~~~~~fLia~~l~~-dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~-- 349 (477)
T PF11700_consen 273 TFKEIRKLRQLFLFLIAYFLYS-DGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTK-- 349 (477)
T ss_pred HHHHHHhChHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchh--
Confidence 5667777777777666666544 4444444444444 3 479888764 4557889999999999999999988522
Q ss_pred hhHHHHH--HHHHHHHHHHHH-----hccCchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHH
Q 007654 429 RPVAMAV--AQFVMAIGHIFL-----GMGWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGS 501 (594)
Q Consensus 429 r~~~l~~--~~~~~~~~~ll~-----~~~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~ 501 (594)
|.....+ ..++...+++-+ ...++..+|+..+++|+..|+..+.-=++.+|+=-..+-++-||+..+..=..+
T Consensus 350 ~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss 429 (477)
T PF11700_consen 350 RTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASS 429 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHH
Confidence 1222111 112222222100 133455799999999999999999999999999999999999999988877777
Q ss_pred HHHHHHHHHHHHHhhhhcccCcccccccccccccCCCCCCCCCccccCcccHHHHHHHHHHHHHHHHHHHHHHhh
Q 007654 502 LVFSGLIASYIYDHEAEKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTSMIMSGLCIVAVILSMILVHR 576 (594)
Q Consensus 502 ~~~~~~l~G~iyd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~~l~~r 576 (594)
. +||.+.|.+-|.++ ..|..|.....+.++++++-..+..+
T Consensus 430 ~-lGPll~g~i~~~tg---------------------------------~~r~g~~~l~~lf~~gl~ll~~v~~~ 470 (477)
T PF11700_consen 430 W-LGPLLFGLITDATG---------------------------------SQRYGFLFLLVLFLIGLILLFFVDVE 470 (477)
T ss_pred H-HHHHHHHHHHHHhC---------------------------------CchhHHHHHHHHHHHHHHHHhhccch
Confidence 7 59999999999986 47888888888888887776554443
No 121
>PRK03545 putative arabinose transporter; Provisional
Probab=98.61 E-value=6.9e-07 Score=95.82 Aligned_cols=149 Identities=11% Similarity=0.117 Sum_probs=116.6
Q ss_pred chHHHHHHhCCCcchh--HHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHh-ccCchhHHHHH
Q 007654 383 NLGQMSQSLGYDNTHI--FVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLG-MGWPGAMYVGT 459 (594)
Q Consensus 383 n~~~i~~~~g~~~~~~--~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~-~~~~~~l~~~~ 459 (594)
-..++.+++|.+..+. .+++..+...++.+.+|.++||++||+. +.....+.+++.++.. ..+...+++.-
T Consensus 31 ~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~------~~~~~~~~~~~~~~~~~~~~~~~l~~~r 104 (390)
T PRK03545 31 LLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKL------LIGLFVLFIASHVLSALAWNFTVLLISR 104 (390)
T ss_pred chHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHH------HHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 3677888899887653 7888999999999999999999998543 2334444555544433 34445677777
Q ss_pred HHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHHhhhhcccCcccccccccccccCCCC
Q 007654 460 LLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYDHEAEKQHQPHHHLLNAGSIFTSMPR 539 (594)
Q Consensus 460 ~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (594)
++.|++.|..+.....++.|.+..++-++..|+...+..+|.. ++|.+.+.+.+..+
T Consensus 105 ~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~-ig~~l~~~l~~~~g---------------------- 161 (390)
T PRK03545 105 IGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMV-LGLPLGRVIGQYLG---------------------- 161 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHH-HHhhHHHHHHHHhc----------------------
Confidence 8889999988899999999999989999999999999999887 58999998887654
Q ss_pred CCCCCccccCcccHHHHHHHHHHHHHHHHHHHH
Q 007654 540 VDEPLKCEGSICYFLTSMIMSGLCIVAVILSMI 572 (594)
Q Consensus 540 ~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~~ 572 (594)
+|..|.+.+.++++..++...
T Consensus 162 ------------w~~~f~~~~~~~~l~~~~~~~ 182 (390)
T PRK03545 162 ------------WRTTFLAIGGGALITLLLLIK 182 (390)
T ss_pred ------------HHHHHHHHHHHHHHHHHHHHH
Confidence 889999998887776555444
No 122
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.60 E-value=3.8e-07 Score=98.47 Aligned_cols=147 Identities=13% Similarity=0.139 Sum_probs=111.7
Q ss_pred cHHHHHHHHHHHhhhcchhheecchHHHHHHhCCCcch--hHHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHH
Q 007654 360 KADFWLIFFSLLLGSGSGLTVIDNLGQMSQSLGYDNTH--IFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQ 437 (594)
Q Consensus 360 t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~~~g~~~~~--~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~ 437 (594)
+++||.+++..++..-...++...+.++.++++.++.. ..++.+.+...+.-+.+|++.||++||+.. ....
T Consensus 2 ~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl------~~~~ 75 (393)
T PRK11195 2 SKGFYAIMAAQFFSALADNALLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVM------FIAN 75 (393)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhh------HHHH
Confidence 57899999998887665555666677788888876643 367889999999999999999999997653 2222
Q ss_pred HHHHHHHHHHhccCchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHHh
Q 007654 438 FVMAIGHIFLGMGWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYDH 515 (594)
Q Consensus 438 ~~~~~~~ll~~~~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~ 515 (594)
.+..++.++...... .++.-++.|++.|......-+++.|++..++.++..|++.....+|.. ++|.++|.++|.
T Consensus 76 ~~~~~~~~~~~~~~~--~~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~-~Gp~lgG~l~~~ 150 (393)
T PRK11195 76 GIKLLGCLLMLFGIH--PLLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAIL-LGTVLGGALADP 150 (393)
T ss_pred HHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 223333222211111 244557789999999999999999999999999999999988888777 599999999983
No 123
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.60 E-value=1.4e-05 Score=88.63 Aligned_cols=123 Identities=17% Similarity=0.219 Sum_probs=83.8
Q ss_pred HhcCcc-cccccccHHHHhhhCCChhhHHHHHHHHhhhhhcccchhhhhchhh-----hHHHHHHHHHHH-HHHHHHHHH
Q 007654 27 SCAGIG-YLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSVGFLAGSLCEVLP-----IWGALLVGALQN-FIGYGWVWL 99 (594)
Q Consensus 27 l~~Gt~-Y~fS~ys~~Lk~~lg~sq~~l~~i~~a~~~G~~~gi~~G~l~D~~g-----p~~~l~iG~~~~-~~Gy~~~~l 99 (594)
++-|.. -....-.+-+++++|+|.+|++.+.....+.-.+-+++|.+.|++| +|+.++++.++. ++.+..
T Consensus 36 ~~qGl~~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~--- 112 (468)
T TIGR00788 36 FVKGIAGLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPFAGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGL--- 112 (468)
T ss_pred HHhhHHHHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHh---
Confidence 344444 3344667778999999999998887777777778788999999998 788888887765 233332
Q ss_pred HHhcCCCChhHHHHHHHHHhhccccchhhhhHHHHHHHhcCCCCCceehhhHhhhh
Q 007654 100 IVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAG 155 (594)
Q Consensus 100 ~~~g~i~~~s~~~l~~~~~l~g~G~~~~~taal~t~~k~FP~~RG~~~Gl~~a~~G 155 (594)
.. ..++ .........++.+++.+..|.++=.-.++..|++++...++...+++
T Consensus 113 -l~-~~~~-~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~~~~~~~~~~~s~~~~ 165 (468)
T TIGR00788 113 -LP-GKVS-SAKVAAAFIFLAALAKALYDVLVDSLYSERIRESPSAGPSLVSWMWG 165 (468)
T ss_pred -cc-cccc-hHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhhcCCCcCCCeeeHHHH
Confidence 11 1112 22222235667788888889999888999999555554445544444
No 124
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.58 E-value=1.9e-06 Score=91.73 Aligned_cols=107 Identities=23% Similarity=0.300 Sum_probs=82.7
Q ss_pred hCCChhhHHHHHHHHhhhh-hcccchhhhhchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHhhcccc
Q 007654 46 LNYNQKQIARLGVAKDLGD-SVGFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGE 124 (594)
Q Consensus 46 lg~sq~~l~~i~~a~~~G~-~~gi~~G~l~D~~gp~~~l~iG~~~~~~Gy~~~~l~~~g~i~~~s~~~l~~~~~l~g~G~ 124 (594)
++-.++|+.++=-++.+-. ....+.|.+.||.|.|...++|-+..++.-.++ ++.+ ++|.+.+-=.+-|.|+
T Consensus 101 ~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilF--afg~-----sy~~l~vAR~LQgvgs 173 (464)
T KOG3764|consen 101 LDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILF--AFGN-----SYPMLFVARSLQGVGS 173 (464)
T ss_pred ccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHH--HHcc-----hhHHHHHHHHHhhhhH
Confidence 4444555555533333333 458889999999999999999999877666654 2322 5777666778889999
Q ss_pred chhhhhHHHHHHHhcCCC--CCceehhhHhhhhhhHH
Q 007654 125 TYFNTAALVSCVQNFPKS--RGPVVGILKGFAGLGGA 159 (594)
Q Consensus 125 ~~~~taal~t~~k~FP~~--RG~~~Gl~~a~~GLSa~ 159 (594)
++++|+.+.-.++.||++ ||.+.|+..++.+||-.
T Consensus 174 A~~~tsglamlAd~f~~d~er~~vmGialgfislG~l 210 (464)
T KOG3764|consen 174 AFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVL 210 (464)
T ss_pred HHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccce
Confidence 999999999999999964 79999999999999853
No 125
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.57 E-value=1.5e-05 Score=89.65 Aligned_cols=96 Identities=22% Similarity=0.244 Sum_probs=67.0
Q ss_pred hhCCChhhHHHHHHHHhhhh-hcccchhhhhchhhhHHHHHHHHHHHHHHHHHHH-HHHhcCCCChhHHHHHHHHHhhcc
Q 007654 45 SLNYNQKQIARLGVAKDLGD-SVGFLAGSLCEVLPIWGALLVGALQNFIGYGWVW-LIVTGRAPVLPLWAMCILIFVGNN 122 (594)
Q Consensus 45 ~lg~sq~~l~~i~~a~~~G~-~~gi~~G~l~D~~gp~~~l~iG~~~~~~Gy~~~~-l~~~g~i~~~s~~~l~~~~~l~g~ 122 (594)
++.=|...+.++.++..+-. .+++++|.+.||+.+|-+++..-+...+....+. +...|.. ++|.++++.++.|.
T Consensus 39 ~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~---~~~~Ll~~~fl~g~ 115 (524)
T PF05977_consen 39 QLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLL---SPWLLLILTFLLGI 115 (524)
T ss_pred HHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcC---CHHHHHHHHHHHHH
Confidence 34445556666666666665 4699999999999999888887776655544432 3445543 57888888888888
Q ss_pred ccchhhhhHHHHHHHhcCCCC
Q 007654 123 GETYFNTAALVSCVQNFPKSR 143 (594)
Q Consensus 123 G~~~~~taal~t~~k~FP~~R 143 (594)
+.++.+.+--...-+--|+++
T Consensus 116 ~~a~~~PA~~A~ip~lV~~~~ 136 (524)
T PF05977_consen 116 GSAFFNPAWQAIIPELVPKED 136 (524)
T ss_pred HHHHHHHHHHHHHHHhccHhh
Confidence 888776666655556677654
No 126
>PRK10489 enterobactin exporter EntS; Provisional
Probab=98.56 E-value=5.5e-07 Score=97.47 Aligned_cols=160 Identities=13% Similarity=0.012 Sum_probs=107.0
Q ss_pred HHhhcHHHHHHHHHHHhhhcchhheecchHHHHHHhCCCcch--hHHHHHHHhhhhhcccccchhhhhhhccCCchhHHH
Q 007654 356 QALIKADFWLIFFSLLLGSGSGLTVIDNLGQMSQSLGYDNTH--IFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAM 433 (594)
Q Consensus 356 e~l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~~~g~~~~~--~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l 433 (594)
...|+++|+.+++..++.....-+...-...+.++++.++.+ ...+...+...++.+.+|.++||++||+.......+
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~ 91 (417)
T PRK10489 12 LLKTHPAFRAVFIARFISIFGLGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGT 91 (417)
T ss_pred HHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHH
Confidence 445788899887775554333222233344445677766543 377889999999999999999999997654211111
Q ss_pred HHHHHHHHHHHHHHh-ccCchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHH
Q 007654 434 AVAQFVMAIGHIFLG-MGWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYI 512 (594)
Q Consensus 434 ~~~~~~~~~~~ll~~-~~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~i 512 (594)
... ....++...+. ..+...+++..++.|++.|.........+.|.+..++.++..++......+|.. ++|.++|.+
T Consensus 92 ~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~g~~l~g~l 169 (417)
T PRK10489 92 CGL-GFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSV-ISPALGGLL 169 (417)
T ss_pred HHH-HHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHH-hHHHHHHHH
Confidence 110 11111111111 122345666777888888887777788899999988889999998888888887 599999999
Q ss_pred HHhhh
Q 007654 513 YDHEA 517 (594)
Q Consensus 513 yd~~~ 517 (594)
+|..+
T Consensus 170 ~~~~~ 174 (417)
T PRK10489 170 IAAGG 174 (417)
T ss_pred HHHHh
Confidence 98654
No 127
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=98.56 E-value=2.3e-06 Score=91.66 Aligned_cols=174 Identities=14% Similarity=0.148 Sum_probs=123.7
Q ss_pred cHHHHHHHHHHHhhhcchhheecchHHHHHHhCCCcch-------hHHHHHHHhhhhhcccccchhhhhhhccCCchhHH
Q 007654 360 KADFWLIFFSLLLGSGSGLTVIDNLGQMSQSLGYDNTH-------IFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVA 432 (594)
Q Consensus 360 t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~~~g~~~~~-------~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~ 432 (594)
+++++.+|+..++..-.-.++..-+..+.+++|.+..+ ...++..+...++.+.+|.++||++||+..
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~----- 87 (408)
T PRK09874 13 KRNLTVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIML----- 87 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHH-----
Confidence 45788887777665444444555677777888877532 256778889999999999999999885432
Q ss_pred HHHHHHHHHHHHHHHhc-cCchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHH
Q 007654 433 MAVAQFVMAIGHIFLGM-GWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASY 511 (594)
Q Consensus 433 l~~~~~~~~~~~ll~~~-~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~ 511 (594)
.....+..++.+++.. .+...+++..++.|++.+ ........+.|.+..++.++..++...+..+|.. ++|.+.|.
T Consensus 88 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~ 164 (408)
T PRK09874 88 -LRSALGMGIVMVLMGLAQNIWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGAL-LGPLAGGL 164 (408)
T ss_pred -HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 2333444444433332 334467777788888754 5566777888999888889999999888888887 58999999
Q ss_pred HHHhhhhcccCcccccccccccccCCCCCCCCCccccCcccHHHHHHHHHHHHHHHHHHHHHHh
Q 007654 512 IYDHEAEKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTSMIMSGLCIVAVILSMILVH 575 (594)
Q Consensus 512 iyd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~~l~~ 575 (594)
+.|..+ ++.+|.+.+.+++++.++..+..+
T Consensus 165 l~~~~~----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~ 194 (408)
T PRK09874 165 LADSYG----------------------------------LRPVFFITASVLFLCFLVTLFCIR 194 (408)
T ss_pred HHHHhC----------------------------------HHHHHHHHHHHHHHHHHHHHHHhc
Confidence 988653 888999988887777666655443
No 128
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=98.55 E-value=6.4e-07 Score=93.72 Aligned_cols=150 Identities=16% Similarity=0.226 Sum_probs=110.5
Q ss_pred chHHHHHHhCCCcch--hHHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHhc-cCchhHHHHH
Q 007654 383 NLGQMSQSLGYDNTH--IFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLGM-GWPGAMYVGT 459 (594)
Q Consensus 383 n~~~i~~~~g~~~~~--~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~~-~~~~~l~~~~ 459 (594)
-..++.+++|.+..+ ...++..++..++++.+|.++||++||+.. .+...+..++.++... .+...+++.-
T Consensus 25 ~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (377)
T TIGR00890 25 LAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVA------MLGGILYGLGFTFYAIADSLAALYLTY 98 (377)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchh------HHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344566678887764 388999999999999999999999996653 2333444444444332 3344566777
Q ss_pred HHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHHhhhhcccCcccccccccccccCCCC
Q 007654 460 LLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYDHEAEKQHQPHHHLLNAGSIFTSMPR 539 (594)
Q Consensus 460 ~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (594)
.+.|++.|..+......+.|+|. |+-++..++...+..+|+.+ .+.+.+.+.|..
T Consensus 99 ~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~----------------------- 153 (377)
T TIGR00890 99 GLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFI-LSPLITSVINLE----------------------- 153 (377)
T ss_pred HHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhH-HHHHHHHHHhcc-----------------------
Confidence 78999999888888888899995 78899999999998888875 445666665533
Q ss_pred CCCCCccccCcccHHHHHHHHHHHHHHHHHHHHHH
Q 007654 540 VDEPLKCEGSICYFLTSMIMSGLCIVAVILSMILV 574 (594)
Q Consensus 540 ~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~~l~ 574 (594)
-+|..|.+.+.++++..++..+..
T Consensus 154 -----------~~~~~f~~~~~~~~~~~~~~~~~~ 177 (377)
T TIGR00890 154 -----------GVPAAFIYMGIIFLLVIVLGAFLI 177 (377)
T ss_pred -----------cHHHHHHHHHHHHHHHHHHHHHhe
Confidence 389999999888887766665543
No 129
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.54 E-value=3.4e-07 Score=100.46 Aligned_cols=152 Identities=12% Similarity=0.209 Sum_probs=117.2
Q ss_pred cchHHHHHHhCCCcch--hHHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHhc-cCchhHHHH
Q 007654 382 DNLGQMSQSLGYDNTH--IFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLGM-GWPGAMYVG 458 (594)
Q Consensus 382 ~n~~~i~~~~g~~~~~--~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~~-~~~~~l~~~ 458 (594)
.....+.+++|.+..+ ...+...+++.++.+.+|+++||++||+. +.....+..++.++... .+...+.+.
T Consensus 23 ~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~------~~~~~~~~~~~~~~~~~~~~~~~l~~~ 96 (485)
T TIGR00711 23 VAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRL------FLISTFAFTLGSLLCGVAPNLELMIIF 96 (485)
T ss_pred HHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHH------HHHHHHHHHHHHHHHhCcCCHHHHHHH
Confidence 3456677788887653 47889999999999999999999988543 23344445555544443 344567788
Q ss_pred HHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHHhhhhcccCcccccccccccccCCC
Q 007654 459 TLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYDHEAEKQHQPHHHLLNAGSIFTSMP 538 (594)
Q Consensus 459 ~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~~~~~~~~~~~~~~~~~~~~~~~ 538 (594)
-.+.|++.|........++.|.+..++-++..++...+..+|.. ++|.+.|.+.|+.+
T Consensus 97 ~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~-~g~~~~~~l~~~~~--------------------- 154 (485)
T TIGR00711 97 RVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPA-LGPTLGGWIIENYH--------------------- 154 (485)
T ss_pred HHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhh-hhhccHhHhccCcC---------------------
Confidence 88999999999999999999999999999999999999888887 58999998887543
Q ss_pred CCCCCCccccCcccHHHHHHHHHHHHHHHHHHHHHH
Q 007654 539 RVDEPLKCEGSICYFLTSMIMSGLCIVAVILSMILV 574 (594)
Q Consensus 539 ~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~~l~ 574 (594)
++..|.+...+++++.++..+..
T Consensus 155 -------------w~~~f~~~~~~~~~~~~~~~~~~ 177 (485)
T TIGR00711 155 -------------WRWIFLINVPIGIIVVVVAFFIL 177 (485)
T ss_pred -------------ceehhhhhhHHHHHHHHHHHHHc
Confidence 67788888777777766665543
No 130
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.53 E-value=5.7e-05 Score=85.70 Aligned_cols=129 Identities=20% Similarity=0.195 Sum_probs=76.2
Q ss_pred hhHHHHHHHHHHHHhcC--cccccccccHHHHhhhCCChhhHHHHHHHHhhhhhc-ccchhhhhchhhhHHHHHHHHHHH
Q 007654 14 NRWLVFVAAMWIQSCAG--IGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQN 90 (594)
Q Consensus 14 ~Rw~~l~a~~~i~l~~G--t~Y~fS~ys~~Lk~~lg~sq~~l~~i~~a~~~G~~~-gi~~G~l~D~~gp~~~l~iG~~~~ 90 (594)
+|.+..++++.++.++. ..+..+.--+++-..+|=+ ++..+++++-.++... ..+.|.+.|.+|+|..+++|.++.
T Consensus 40 ~~~i~~~~~~~~~~~~~~~~~~~~a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~ 118 (599)
T PF06609_consen 40 PRFIASFAAFSLAVIAAYFVLVLPASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLG 118 (599)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHH
Confidence 45554444444444432 1222222224566667665 4556677777777644 567999999999999999999998
Q ss_pred HHHHHHHHHHHhcCCCChhHHHHHHHHHhhccccchhhhhHHHHHHHhcCC-CCCceehhhH
Q 007654 91 FIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPK-SRGPVVGILK 151 (594)
Q Consensus 91 ~~Gy~~~~l~~~g~i~~~s~~~l~~~~~l~g~G~~~~~taal~t~~k~FP~-~RG~~~Gl~~ 151 (594)
.+|..+. ...+ +.-.+..-..+.|.|.+......+. ...--|. .|+...++..
T Consensus 119 vvG~Iv~-----atA~--~~~~~iag~~l~GvgaG~~~~~~~~-isEl~p~k~R~~~~~~~~ 172 (599)
T PF06609_consen 119 VVGSIVC-----ATAQ--NMNTFIAGMVLYGVGAGVQELAALA-ISELVPNKWRGLGLAIAS 172 (599)
T ss_pred HhHHHHh-----hcCC--cHHHHHHHHHHHHHhhHHHHHHHHH-HHHhcccchhhhHhHHHH
Confidence 8888753 3322 3445555555555565554433333 2344575 4776555443
No 131
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=98.53 E-value=9.2e-07 Score=97.50 Aligned_cols=149 Identities=10% Similarity=0.148 Sum_probs=108.0
Q ss_pred chHHHHHHhCCCcch--hHHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHhc-cCchhHHHHH
Q 007654 383 NLGQMSQSLGYDNTH--IFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLGM-GWPGAMYVGT 459 (594)
Q Consensus 383 n~~~i~~~~g~~~~~--~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~~-~~~~~l~~~~ 459 (594)
...++.+++|.+..+ ...+++.+...++.+++|+++||++||+.. .....+..++.++... .+...+++..
T Consensus 41 ~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l------~~~~~~~~~~~~~~~~~~~~~~l~~~~ 114 (455)
T TIGR00892 41 FFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVV------IAGGLLASLGMILASFSSNVIELYLTA 114 (455)
T ss_pred hHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHH------HhhHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 456677788887654 367788888899999999999999885532 2333334444444333 2233344333
Q ss_pred -HHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHHhhhhcccCcccccccccccccCCC
Q 007654 460 -LLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYDHEAEKQHQPHHHLLNAGSIFTSMP 538 (594)
Q Consensus 460 -~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~~~~~~~~~~~~~~~~~~~~~~~ 538 (594)
++.|++.|..+.....++.++|. |+-++..|+..++..+|.. ++|.+.|.+.|..+
T Consensus 115 ~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~-~~~~l~~~l~~~~g--------------------- 171 (455)
T TIGR00892 115 GFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLS-TLAPLNQYLFESFG--------------------- 171 (455)
T ss_pred HHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHH-HHHHHHHHHHHHhC---------------------
Confidence 56799988776666778899995 7889999999999999887 57889999998654
Q ss_pred CCCCCCccccCcccHHHHHHHHHHHHHHHHHHHHH
Q 007654 539 RVDEPLKCEGSICYFLTSMIMSGLCIVAVILSMIL 573 (594)
Q Consensus 539 ~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~~l 573 (594)
+|.+|.+.+++++++++..+++
T Consensus 172 -------------wr~~f~~~~~~~~~~~v~~~~~ 193 (455)
T TIGR00892 172 -------------WRGSFLILGGLLLHCCVCGALM 193 (455)
T ss_pred -------------hHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999998887776554444
No 132
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=98.51 E-value=2.4e-06 Score=93.88 Aligned_cols=172 Identities=16% Similarity=0.169 Sum_probs=110.7
Q ss_pred HHHHHHHHhhhcchhhe---ecchHHHHHHhCCCcchh--HHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHHH
Q 007654 364 WLIFFSLLLGSGSGLTV---IDNLGQMSQSLGYDNTHI--FVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQF 438 (594)
Q Consensus 364 wll~~~~~~~~g~Gl~v---i~n~~~i~~~~g~~~~~~--~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~ 438 (594)
|.++...++....-.+. ++..-|..++.|.++.+. .++...+...++.+.+|+++||++||+. +....+
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~------l~~~~~ 101 (452)
T PRK11273 28 WQIFLGIFFGYAAYYLVRKNFALAMPYLVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVF------LPAGLI 101 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchh------HHHHHH
Confidence 55555555543222211 122233333337776543 7899999999999999999999998653 233334
Q ss_pred HHHHHHHHHhcc-----CchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHH
Q 007654 439 VMAIGHIFLGMG-----WPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIY 513 (594)
Q Consensus 439 ~~~~~~ll~~~~-----~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iy 513 (594)
+..++.+++... +...+++...+.|++.|..+.....++.|+|..|+-|+..|+...+..+|+.+.+|.+...+.
T Consensus 102 ~~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~ 181 (452)
T PRK11273 102 LAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMA 181 (452)
T ss_pred HHHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 444444333221 223455666788999998888778889999998889999999888888876544554322222
Q ss_pred HhhhhcccCcccccccccccccCCCCCCCCCccccCcccHHHHHHHHHHHHHHHHHHHHHHh
Q 007654 514 DHEAEKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTSMIMSGLCIVAVILSMILVH 575 (594)
Q Consensus 514 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~~l~~ 575 (594)
... -++..|++.+.++++..++.++..+
T Consensus 182 ~~~----------------------------------gw~~~f~i~~~~~~~~~~l~~~~~~ 209 (452)
T PRK11273 182 WFN----------------------------------DWHAALYMPAFAAILVALFAFAMMR 209 (452)
T ss_pred Hhc----------------------------------cHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 211 3889999988877776665555443
No 133
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=98.51 E-value=1.7e-06 Score=94.00 Aligned_cols=157 Identities=12% Similarity=0.098 Sum_probs=114.6
Q ss_pred ecchHH-HHHHhCCCcchh--HHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHhc-cCchhHH
Q 007654 381 IDNLGQ-MSQSLGYDNTHI--FVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLGM-GWPGAMY 456 (594)
Q Consensus 381 i~n~~~-i~~~~g~~~~~~--~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~~-~~~~~l~ 456 (594)
++...+ +.+++|.+..+. ..+++.++.+++.+..|+++||++||+.. ....++..++.++... .+...++
T Consensus 27 ~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~------~~~~~~~~~~~~~~~~~~~~~~l~ 100 (412)
T TIGR02332 27 IGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWI------AGIMVLWGIASTATMFATGPESLY 100 (412)
T ss_pred HHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHH------HHHHHHHHHHHHHHHHhcCHHHHH
Confidence 333333 446778776643 78999999999999999999999995532 3334444444444333 4455788
Q ss_pred HHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHHhhhhcccCcccccccccccccC
Q 007654 457 VGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYDHEAEKQHQPHHHLLNAGSIFTS 536 (594)
Q Consensus 457 ~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~~~~~~~~~~~~~~~~~~~~~ 536 (594)
+.-++.|++.|+.+.....+++|+|..|+-|+..|+...+..+|.. +++.+.+.+.+.++-
T Consensus 101 ~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~-~~~~~~~~l~~~~~~------------------ 161 (412)
T TIGR02332 101 LLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMA-LGLILSGYILALDGL------------------ 161 (412)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhCCCC------------------
Confidence 8889999999999888888999999988999999999999999887 588899988764320
Q ss_pred CCCCCCCCccccCcccHHHHHHHHHHHHHHHHHHHH
Q 007654 537 MPRVDEPLKCEGSICYFLTSMIMSGLCIVAVILSMI 572 (594)
Q Consensus 537 ~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~~ 572 (594)
.+..-+|.+|.+.+..+++.+++..+
T Consensus 162 ----------~~~~gwr~~f~~~~~~~l~~~~~~~~ 187 (412)
T TIGR02332 162 ----------MALKGWQWLFLLEGFPSVILGVMTWF 187 (412)
T ss_pred ----------CCccchhHHHHHHHHHHHHHHHHHhh
Confidence 01124999999987776654444433
No 134
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.50 E-value=1.2e-06 Score=92.13 Aligned_cols=146 Identities=16% Similarity=0.210 Sum_probs=102.6
Q ss_pred HHHHHHHHHHHhhhcchhheecchHH-HHHHhCCCcch--hHHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHH
Q 007654 361 ADFWLIFFSLLLGSGSGLTVIDNLGQ-MSQSLGYDNTH--IFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQ 437 (594)
Q Consensus 361 ~~Fwll~~~~~~~~g~Gl~vi~n~~~-i~~~~g~~~~~--~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~ 437 (594)
+.||..++.+++......++..-..+ +.+++|.+..+ ...++..+...++.+.+|.++||++||+. +.+..
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~------~~~~~ 74 (366)
T TIGR00886 1 RNLFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYT------TTLSL 74 (366)
T ss_pred CchHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHH------HHHHH
Confidence 36899999888776666665555554 66788988764 37789999999999999999999988553 23444
Q ss_pred HHHHHHHHHHhc-c-CchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHH
Q 007654 438 FVMAIGHIFLGM-G-WPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYD 514 (594)
Q Consensus 438 ~~~~~~~ll~~~-~-~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd 514 (594)
++..++.++... . +...+++..++.|++.+ .+.....+++|++..|+-++..++......+|.. +++.+.+.+.+
T Consensus 75 ~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~-~~~~i~~~l~~ 151 (366)
T TIGR00886 75 LLLAIPCLWAGLAVQSYSVLLLLRLFIGIAGG-SFASCMPWISFFFPKKIQGTALGLAAGWGNMGGG-VAQFVMPPIIG 151 (366)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHhch-hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHH-HHHHHHHHHHH
Confidence 555555544433 3 44456777888898844 5566778899999988889988887755445544 24444444443
No 135
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.50 E-value=2.4e-06 Score=91.55 Aligned_cols=156 Identities=12% Similarity=0.139 Sum_probs=117.1
Q ss_pred hheecchHHHHHHhCCCcchh--HHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHhc-cCchh
Q 007654 378 LTVIDNLGQMSQSLGYDNTHI--FVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLGM-GWPGA 454 (594)
Q Consensus 378 l~vi~n~~~i~~~~g~~~~~~--~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~~-~~~~~ 454 (594)
-++..-+.++.+++|.+..+. ..++..+...++.+..|+++||++||+. +.....+..++.++... .+...
T Consensus 20 ~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~------l~~~~~~~~i~~~~~~~~~~~~~ 93 (392)
T PRK10473 20 DMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPV------AIPGAALFIIASLLCSLAETSSL 93 (392)
T ss_pred HHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHH------HHHHHHHHHHHHHHHHHhCcHHH
Confidence 344456778888898887543 7788899999999999999999988542 23333444444443332 33445
Q ss_pred HHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHHhhhhcccCcccccccccccc
Q 007654 455 MYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYDHEAEKQHQPHHHLLNAGSIF 534 (594)
Q Consensus 455 l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~~~~~~~~~~~~~~~~~~~ 534 (594)
+++.-.+.|++.|..+.....++.|.+..++-++..++......++.. ++|.+.+.+.|..
T Consensus 94 ~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~-~~~~i~~~l~~~~------------------ 154 (392)
T PRK10473 94 FLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPV-LAPVLGHLIMLKF------------------ 154 (392)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhCc------------------
Confidence 666778889999999999999999999999999999998888778776 5888888777643
Q ss_pred cCCCCCCCCCccccCcccHHHHHHHHHHHHHHHHHHHHHH
Q 007654 535 TSMPRVDEPLKCEGSICYFLTSMIMSGLCIVAVILSMILV 574 (594)
Q Consensus 535 ~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~~l~ 574 (594)
.++..|.+.+..+++..+++.+..
T Consensus 155 ----------------g~~~~~~~~~~~~~i~~~~~~~~~ 178 (392)
T PRK10473 155 ----------------PWQSLFYTMAAMGILVLLLSLFIL 178 (392)
T ss_pred ----------------ChHHHHHHHHHHHHHHHHHHHHHc
Confidence 388999999888777776665443
No 136
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=98.50 E-value=2.6e-06 Score=90.47 Aligned_cols=147 Identities=16% Similarity=0.217 Sum_probs=105.7
Q ss_pred HHHHHHHHHhhhcchhheecchHHHHHHhCCCcch--hHHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHHHHH
Q 007654 363 FWLIFFSLLLGSGSGLTVIDNLGQMSQSLGYDNTH--IFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVM 440 (594)
Q Consensus 363 Fwll~~~~~~~~g~Gl~vi~n~~~i~~~~g~~~~~--~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~ 440 (594)
+...++..++....-.++.....++.++.|.+..+ ...++..+...++.+.+|.++||++||+.. .....+.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~------~~~~~~~ 87 (405)
T TIGR00891 14 FSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPM------VTSIVLF 87 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH------HHHHHHH
Confidence 33444444433332223333344565678887654 378899999999999999999999985532 2333444
Q ss_pred HHHHHHHhc-cCchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHHhh
Q 007654 441 AIGHIFLGM-GWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYDHE 516 (594)
Q Consensus 441 ~~~~ll~~~-~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~ 516 (594)
.++.++... .+...+++.-++.|++.|..+.....++.|.+..++-++..|+..++..+|.. +++.+.+.+.+..
T Consensus 88 ~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~l~~~l~~~~ 163 (405)
T TIGR00891 88 SAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAV-VAAQVYSLVVPVW 163 (405)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHH-HHHHHHHHHHHhc
Confidence 444433332 34456777889999999999999999999999999999999999999999987 5888888887654
No 137
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.49 E-value=1.7e-06 Score=96.54 Aligned_cols=149 Identities=21% Similarity=0.281 Sum_probs=104.9
Q ss_pred HHHHHHHHHHHhhhcchhheecchHHHH-HHhCCCcchh--HHHHHHHhhhhhcccccchhhh-hhhccCCchhHHHHHH
Q 007654 361 ADFWLIFFSLLLGSGSGLTVIDNLGQMS-QSLGYDNTHI--FVSMISIWNFLGRVGGGYFSEI-IVRDYAYPRPVAMAVA 436 (594)
Q Consensus 361 ~~Fwll~~~~~~~~g~Gl~vi~n~~~i~-~~~g~~~~~~--~Vsl~si~n~~GRl~~G~lsD~-l~r~~~~~r~~~l~~~ 436 (594)
+.+|+++..-++-..+--++...+.... +++|.+.++. .++.+.....+.-+++|+++|| +|||+.. ...
T Consensus 14 ~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~------~~g 87 (489)
T PRK10207 14 RPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTI------VLG 87 (489)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHH------HHH
Confidence 5567766666554433333333344333 4578776543 6677777888888899999999 8996643 444
Q ss_pred HHHHHHHHHHHhcc--CchhHHHHHHHHHhhhhhccchhHHHHHHhhccCc--hhhhhhHHHhhhhHHHHHHHHHHHHHH
Q 007654 437 QFVMAIGHIFLGMG--WPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKK--FGALYNFLTLANPAGSLVFSGLIASYI 512 (594)
Q Consensus 437 ~~~~~~~~ll~~~~--~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~--~g~nyg~~~~a~~~g~~~~~~~l~G~i 512 (594)
.++..+++++.... .+..++++-++.|++.|...+..+++++|.|..++ .+.-|++.+.+..+|+. ++|.+.|.+
T Consensus 88 ~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~-~g~~l~g~l 166 (489)
T PRK10207 88 AIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSL-ISLSLAPVI 166 (489)
T ss_pred HHHHHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHH-HHHHHHHHH
Confidence 45555565443332 23346678888999999999999999999997653 46689999999999998 589999998
Q ss_pred HHhh
Q 007654 513 YDHE 516 (594)
Q Consensus 513 yd~~ 516 (594)
-|+.
T Consensus 167 ~~~~ 170 (489)
T PRK10207 167 ADKF 170 (489)
T ss_pred HHhh
Confidence 7754
No 138
>PRK11043 putative transporter; Provisional
Probab=98.49 E-value=2.2e-06 Score=92.03 Aligned_cols=159 Identities=11% Similarity=0.103 Sum_probs=116.2
Q ss_pred hcchhheecchHHHHHHhCCCcchh--HHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHhc-c
Q 007654 374 SGSGLTVIDNLGQMSQSLGYDNTHI--FVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLGM-G 450 (594)
Q Consensus 374 ~g~Gl~vi~n~~~i~~~~g~~~~~~--~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~~-~ 450 (594)
..+--++.....++.+++|.++.+. ..++..+...++.+.+|+++||++||+.. .....+..++.++... .
T Consensus 19 ~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~------~~~~~~~~~~~~~~~~~~ 92 (401)
T PRK11043 19 FLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVL------LAGLSLFALGSLGMLWVE 92 (401)
T ss_pred HHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHH------HHHHHHHHHHHHHHHHhc
Confidence 3333444556667778888887643 78899999999999999999999885532 3333344444433333 3
Q ss_pred CchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHHhhhhcccCcccccccc
Q 007654 451 WPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYDHEAEKQHQPHHHLLNA 530 (594)
Q Consensus 451 ~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~~~~~~~~~~~~~~~ 530 (594)
+...+.+.-.+.|++.|........++.|.|..++.+..++.......++.. ++|.+.|.+.|+.+
T Consensus 93 ~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~i~~~l~~~~g------------- 158 (401)
T PRK11043 93 SAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPA-LAPLLGAWLLNHFG------------- 158 (401)
T ss_pred CHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcCC-------------
Confidence 3445666778889988888888889999999988888888888877777776 58999999988654
Q ss_pred cccccCCCCCCCCCccccCcccHHHHHHHHHHHHHHHHHHHHH
Q 007654 531 GSIFTSMPRVDEPLKCEGSICYFLTSMIMSGLCIVAVILSMIL 573 (594)
Q Consensus 531 ~~~~~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~~l 573 (594)
++..|.+...+.++..++..++
T Consensus 159 ---------------------~~~~~~~~~~~~~~~~~~~~~~ 180 (401)
T PRK11043 159 ---------------------WQAIFATLFAITLLLILPTLRL 180 (401)
T ss_pred ---------------------hHHHHHHHHHHHHHHHHHHHHc
Confidence 8888888877777666555443
No 139
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=98.48 E-value=2.3e-06 Score=91.83 Aligned_cols=123 Identities=20% Similarity=0.213 Sum_probs=93.4
Q ss_pred HHHHHHhCCCcch--hHHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHh-ccCchhHHHHHHH
Q 007654 385 GQMSQSLGYDNTH--IFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLG-MGWPGAMYVGTLL 461 (594)
Q Consensus 385 ~~i~~~~g~~~~~--~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~-~~~~~~l~~~~~l 461 (594)
.++.+++|.++.+ ...+...+...++.+.+|+++||++||+.. .....+..++.++.. ..+...+.+.-.+
T Consensus 39 ~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 112 (406)
T PRK11551 39 PRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRIL------IVSVALFGLFSLATAQAWDFPSLLVARLL 112 (406)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhH------HHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 3566778887654 377889999999999999999999986543 222223333332222 3444567778889
Q ss_pred HHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHH
Q 007654 462 IGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYD 514 (594)
Q Consensus 462 iG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd 514 (594)
.|++.|..+.....++.|.|..|+.++..|+...+..+|.. +++.+.+.+.+
T Consensus 113 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~-~~~~~~~~~~~ 164 (406)
T PRK11551 113 TGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGA-LASVIGVLAAG 164 (406)
T ss_pred HHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcc
Confidence 99999999999999999999999999999999999988887 57877766554
No 140
>TIGR00895 2A0115 benzoate transport.
Probab=98.48 E-value=1.6e-06 Score=91.61 Aligned_cols=127 Identities=17% Similarity=0.182 Sum_probs=97.1
Q ss_pred hHHHHHHhCCCcch--hHHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHh-ccCchhHHHHHH
Q 007654 384 LGQMSQSLGYDNTH--IFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLG-MGWPGAMYVGTL 460 (594)
Q Consensus 384 ~~~i~~~~g~~~~~--~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~-~~~~~~l~~~~~ 460 (594)
...+.+++|.+... ...++..+...++.+.+|+++||++||+.. ....++..++.++.. ..+...+++..+
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (398)
T TIGR00895 40 APAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVL------LWSILLFSVFTLLCALATNVTQLLILRF 113 (398)
T ss_pred HHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHH------HHHHHHHHHHHHHHHHccchHHHHHHHH
Confidence 44555677877653 366788899999999999999999885432 333334444443333 234446777888
Q ss_pred HHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHHhhh
Q 007654 461 LIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYDHEA 517 (594)
Q Consensus 461 liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~~ 517 (594)
+.|++.|..+.....+++|.+..++-++..|+...+..+|.. +++.+.|.+.|..+
T Consensus 114 ~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~-~~~~~~~~l~~~~g 169 (398)
T TIGR00895 114 LAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAA-VGGFLAGWLIPVFG 169 (398)
T ss_pred HHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHH-HHHHHHHHHhhccc
Confidence 999999999999999999999989999999999999989887 58889988887553
No 141
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.48 E-value=1.8e-06 Score=96.16 Aligned_cols=170 Identities=18% Similarity=0.294 Sum_probs=112.7
Q ss_pred HHHHHHHHHHHhhhcchhheecchHHHHH-HhCCCcch--hHHHHHHHhhhhhcccccchhhhh-hhccCCchhHHHHHH
Q 007654 361 ADFWLIFFSLLLGSGSGLTVIDNLGQMSQ-SLGYDNTH--IFVSMISIWNFLGRVGGGYFSEII-VRDYAYPRPVAMAVA 436 (594)
Q Consensus 361 ~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~-~~g~~~~~--~~Vsl~si~n~~GRl~~G~lsD~l-~r~~~~~r~~~l~~~ 436 (594)
+.+|.++...+.-..+--++..-+....+ .+|++..+ ...+.+.+...++.+.+|+++||+ |||+. +.+.
T Consensus 9 ~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~------iliG 82 (493)
T PRK15462 9 RAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMA------VMLG 82 (493)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHH------HHHH
Confidence 44555555444433322222233333333 46887654 367888889999999999999998 88553 2444
Q ss_pred HHHHHHHHHHHhcc--CchhHHHHHHHHHhhhhhccchhHHHHHHhhccC--chhhhhhHHHhhhhHHHHHHHHHHHHHH
Q 007654 437 QFVMAIGHIFLGMG--WPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLK--KFGALYNFLTLANPAGSLVFSGLIASYI 512 (594)
Q Consensus 437 ~~~~~~~~ll~~~~--~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k--~~g~nyg~~~~a~~~g~~~~~~~l~G~i 512 (594)
..++.++++++... .+..++++..++.++.|...+..+++++|.|..+ .-.+-+++.+.+..+|+. ++|.+.|.+
T Consensus 83 ~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~-iap~l~g~L 161 (493)
T PRK15462 83 ALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSI-IAPIACGYA 161 (493)
T ss_pred HHHHHHHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHH-HHHHHHHHH
Confidence 55556665544332 2234556666777888888888899999999764 355567777777778887 589999998
Q ss_pred HHhhhhcccCcccccccccccccCCCCCCCCCccccCcccHHHHHHHHHHHHHHHHHHH
Q 007654 513 YDHEAEKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTSMIMSGLCIVAVILSM 571 (594)
Q Consensus 513 yd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~ 571 (594)
.++.+ |+..|.+++...+++++..+
T Consensus 162 ~~~~G----------------------------------w~~~F~iaaigm~l~li~~~ 186 (493)
T PRK15462 162 QEEYS----------------------------------WAMGFGLAAVGMIAGLVIFL 186 (493)
T ss_pred HhhhC----------------------------------hHHHHHHHHHHHHHHHHHHH
Confidence 77553 89999887666555555443
No 142
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.47 E-value=1.4e-06 Score=97.17 Aligned_cols=154 Identities=12% Similarity=0.096 Sum_probs=115.7
Q ss_pred eecchHHHHHHhCCCcch--hHHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHhc-cCchhHH
Q 007654 380 VIDNLGQMSQSLGYDNTH--IFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLGM-GWPGAMY 456 (594)
Q Consensus 380 vi~n~~~i~~~~g~~~~~--~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~~-~~~~~l~ 456 (594)
+..-+.+|.++++.+..+ ..++.+.++.+.+.+.+|.++||++||+.. .....+..++.++... .+...+.
T Consensus 25 v~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l------~~~~~~~~~~~~~~~~a~~~~~li 98 (495)
T PRK14995 25 LHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLL------MLGGTLFGLASLAAAFSPTASWLI 98 (495)
T ss_pred HHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH------HHHHHHHHHHHHHHHHcCCHHHHH
Confidence 333466788888876543 478899999999999999999999985532 3444445555544433 4455677
Q ss_pred HHHHHHHhhhhhccchhHHHHHHhh-ccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHHhhhhcccCccccccccccccc
Q 007654 457 VGTLLIGLGYGAHWAIVPAAASELF-GLKKFGALYNFLTLANPAGSLVFSGLIASYIYDHEAEKQHQPHHHLLNAGSIFT 535 (594)
Q Consensus 457 ~~~~liG~~~G~~~~l~p~i~s~~F-G~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~~~~~~~~~~~~~~~~~~~~ 535 (594)
++-++.|++.|......-.++.+.| ..|+-++-.|+......+|.. ++|.+.|.+.|+.+
T Consensus 99 ~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~-~gp~lgg~l~~~~g------------------ 159 (495)
T PRK14995 99 ATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAA-FGPLVGGILLEHFY------------------ 159 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhhccCC------------------
Confidence 7778899999887766666677777 668899999999999999987 59999999988653
Q ss_pred CCCCCCCCCccccCcccHHHHHHHHHHHHHHHHHHHHHH
Q 007654 536 SMPRVDEPLKCEGSICYFLTSMIMSGLCIVAVILSMILV 574 (594)
Q Consensus 536 ~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~~l~ 574 (594)
+|..|++...++++.+++..+..
T Consensus 160 ----------------wr~~f~i~~~~~~~~~~l~~~~l 182 (495)
T PRK14995 160 ----------------WGSVFLINVPIVLVVMGLTARYV 182 (495)
T ss_pred ----------------hHHHHHHHHHHHHHHHHHHHHhC
Confidence 88999998888777766665544
No 143
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.46 E-value=3.2e-05 Score=86.69 Aligned_cols=378 Identities=17% Similarity=0.165 Sum_probs=211.7
Q ss_pred hhHHHHHHHHhhhhhc-ccchhhhhchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHhhccccchhhh
Q 007654 51 KQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNT 129 (594)
Q Consensus 51 ~~l~~i~~a~~~G~~~-gi~~G~l~D~~gp~~~l~iG~~~~~~Gy~~~~l~~~g~i~~~s~~~l~~~~~l~g~G~~~~~t 129 (594)
.+.++++....+|+.. .++.|.+.|++|+|.+++++.++..+|+.+...+. +++++.+-=++.|.|.|....
T Consensus 89 ~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~-------~~~~l~~GR~l~G~g~G~~~~ 161 (513)
T KOG0254|consen 89 VRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAP-------SWYQLIVGRILTGLGVGGASV 161 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhh-------hHHHHHHHHHHhccchhhhhh
Confidence 3457888899999865 78899999999999999999999999999876552 466777777777888887654
Q ss_pred hHHHHHHHhcCC-CCCceehhhHhhhhhhHHHHHHHHHHhcCCC--hHHHHHHHHHHHHHHHHhhheeecccCCCCcCCC
Q 007654 130 AALVSCVQNFPK-SRGPVVGILKGFAGLGGAILTQVYTMIHAPD--HANLIFMVAVGPAMVVIALMFIIRPVGGHRQVRP 206 (594)
Q Consensus 130 aal~t~~k~FP~-~RG~~~Gl~~a~~GLSa~i~s~i~~~~f~~~--~~~fll~la~~~~~v~l~~~~~ir~~~~~~~~~~ 206 (594)
.+-.-...-=|. .||..+.+..-.+..+ ..+..+...+.+.+ .....+.++..|.++..++++++ | +.+
T Consensus 162 ~~piy~sEiap~~~RG~l~~~~~l~~~~G-i~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~-p-esp----- 233 (513)
T KOG0254|consen 162 LAPVYISEIAPAHIRGTLVSLYQLFITIG-ILLGYCINYGTSKVYAGWRIPLGLALIPAVILALGMLFL-P-ESP----- 233 (513)
T ss_pred cchhhHhhcCChhhhHHHHHHHHHHHHHH-HHHHHHHhhhhccCCccHHHHHHHHHHHHHHHHHHHHhC-C-CCh-----
Confidence 333333333365 6999999888888744 44544444444443 45566666666666666663332 2 100
Q ss_pred CCCCchhHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHhhhcchhhhhhcccccCCChhhhhhcCCCCCCC
Q 007654 207 SDSSSFTFIYSVCLLLAAYLMGVMLVEDLVDLNHTVIIIFTVILFVLLFIPIVIPIILSFFLERTDPAEEALLSKPENME 286 (594)
Q Consensus 207 ~~~~~f~~~~~~~~~l~~~l~~~~~~~~~~~~s~~~~~~~~~i~~~ll~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 286 (594)
+ .+ +- .+........ + . . ++.- +++
T Consensus 234 ---~----------~L----~~-------~g~~~~a~~~-----l--~-----------~------------l~g~-~~~ 258 (513)
T KOG0254|consen 234 ---R----------WL----IE-------KGRLEEAKRS-----L--K-----------R------------LRGL-SPE 258 (513)
T ss_pred ---H----------HH----HH-------cCChHHHHHH-----H--H-----------H------------HhCC-CCc
Confidence 0 00 00 0000000000 0 0 0 0000 000
Q ss_pred CCCCCCcchhhhhcccccCCCCccCCCchhHHHHHHHHHHHHHHhhhhhhhhhhhccCCCCCCCCCCHH----HHhhcHH
Q 007654 287 PGKSNQETDEVILSEVEDEKPKDVDLLPASERRKRIAQLQARLFHAAAEGAVRVKRRRGPHRGEDFTLT----QALIKAD 362 (594)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~d~t~~----e~l~t~~ 362 (594)
+ .+ . +.++.+.. ...+. . . .. .+..+. ...+++-
T Consensus 259 ~------~~--------------------~----~~~~~~~~-~~~~~--~---~----~~--~~~~~~~l~~~~~~~~~ 296 (513)
T KOG0254|consen 259 D------VE--------------------V----ELELLKIK-LLVEA--E---V----AE--GKASWGELFSPKVRKRL 296 (513)
T ss_pred c------hH--------------------H----HHHHHHHH-HHHhh--h---c----cc--ccccHHHhcCcchHHHH
Confidence 0 00 0 00000000 00000 0 0 00 000111 2345566
Q ss_pred HHHHHHHHHhhhcchhheecchHHHHHHhCCCcc-hhHHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHHHHHH
Q 007654 363 FWLIFFSLLLGSGSGLTVIDNLGQMSQSLGYDNT-HIFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMA 441 (594)
Q Consensus 363 Fwll~~~~~~~~g~Gl~vi~n~~~i~~~~g~~~~-~~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~ 441 (594)
++...+..+-....-..++.-..+|.+..|.+.. .....+.++.|.++-++..++-||++||. ++......+.
T Consensus 297 ~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~~~~~~~~~~v~~~~t~~~~~lvd~~gRr~------lll~s~~~m~ 370 (513)
T KOG0254|consen 297 IIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDTFLASIILGVVNFLGTLVATYLVDRFGRRK------LLLFGAAGMS 370 (513)
T ss_pred HHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccHH------HHHHhHHHHH
Confidence 6666666666664446667778888888888754 45566788889999999999999998843 2234444444
Q ss_pred HHHHHHhc------c----C---chhHHHHHHHHHhhhhhccchhHH-HHHHhhccCchhhhhhHHHhhhhHHHHHHHHH
Q 007654 442 IGHIFLGM------G----W---PGAMYVGTLLIGLGYGAHWAIVPA-AASELFGLKKFGALYNFLTLANPAGSLVFSGL 507 (594)
Q Consensus 442 ~~~ll~~~------~----~---~~~l~~~~~liG~~~G~~~~l~p~-i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~ 507 (594)
++++++.. . . .........+.-.+|...++-.|. +.+|.|-.|.=++-.++.....-+.+++.
T Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v--- 447 (513)
T KOG0254|consen 371 ICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLI--- 447 (513)
T ss_pred HHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHH---
Confidence 44443221 1 1 112223333344567777788887 66999998877776666655544443322
Q ss_pred HHHHHHHhhhhcccCcccccccccccccCCCCCCCCCccccCcccHHHHHHHHHHHHHHHH-HHHHHHhhhhhhh
Q 007654 508 IASYIYDHEAEKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTSMIMSGLCIVAVI-LSMILVHRTTNVY 581 (594)
Q Consensus 508 l~G~iyd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~-ls~~l~~r~r~~~ 581 (594)
...|...... .+ ....|.+..+.|.++.+ ........||...
T Consensus 448 --~~~~~~~~~~---------------------------~~---~~~~f~~f~~~~~~~~~~fv~~~~pETkg~s 490 (513)
T KOG0254|consen 448 --SFFFPFITEA---------------------------LG---IGGTFGYFGGICLLSLIIFVFFFVPETKGLT 490 (513)
T ss_pred --HHHHHHHHHh---------------------------cc---ccchHHHHHHHHHHHHHHHheEEcccCCCCc
Confidence 3333322210 00 45667777777777777 4555555565433
No 144
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=98.46 E-value=9.6e-07 Score=92.43 Aligned_cols=149 Identities=15% Similarity=0.187 Sum_probs=108.9
Q ss_pred HHHHHHhCCCcch--hHHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHhc-cCchhHHHHHHH
Q 007654 385 GQMSQSLGYDNTH--IFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLGM-GWPGAMYVGTLL 461 (594)
Q Consensus 385 ~~i~~~~g~~~~~--~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~~-~~~~~l~~~~~l 461 (594)
..+.+++|.+..+ ...++..+...++.+.+|+++||++||+.. ....++..++.++... .+...+++.-++
T Consensus 19 ~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (379)
T TIGR00881 19 PYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFL------PIGLILCAIVNLFFGFSTSLWVMAALWAL 92 (379)
T ss_pred HHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehh------HHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 3455677887754 378899999999999999999999986532 3334444445444332 344567778888
Q ss_pred HHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHH-HHHHHHHhhhhcccCcccccccccccccCCCCC
Q 007654 462 IGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGL-IASYIYDHEAEKQHQPHHHLLNAGSIFTSMPRV 540 (594)
Q Consensus 462 iG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~-l~G~iyd~~~~~~~~~~~~~~~~~~~~~~~~~~ 540 (594)
.|++.|..+.....+++|++..++-++..++...+..+|..+ +|. +.+.+.+..
T Consensus 93 ~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~------------------------ 147 (379)
T TIGR00881 93 NGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGL-LPPLVLFGIAELY------------------------ 147 (379)
T ss_pred HHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHH-HHHHHHHHHHhcC------------------------
Confidence 899999999999999999999989999999999888888874 774 444443322
Q ss_pred CCCCccccCcccHHHHHHHHHHHHHHHHHHHHHH
Q 007654 541 DEPLKCEGSICYFLTSMIMSGLCIVAVILSMILV 574 (594)
Q Consensus 541 ~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~~l~ 574 (594)
.++..|.+.+.++++..++..+..
T Consensus 148 ----------~~~~~~~~~~~~~~~~~~~~~~~~ 171 (379)
T TIGR00881 148 ----------SWHWVFIVPGIIAIIVSLICFLLL 171 (379)
T ss_pred ----------CchhHHHHHHHHHHHHHHHHheee
Confidence 377788888777766555555443
No 145
>PRK12382 putative transporter; Provisional
Probab=98.45 E-value=1.8e-06 Score=92.46 Aligned_cols=153 Identities=15% Similarity=0.133 Sum_probs=106.8
Q ss_pred HhhcHHHHHHHHHHHhhhcchhheecchHH-HHHHhCCCcch--hHHHHHHHhhhhhcccccchhhhhhhccCCchhHHH
Q 007654 357 ALIKADFWLIFFSLLLGSGSGLTVIDNLGQ-MSQSLGYDNTH--IFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAM 433 (594)
Q Consensus 357 ~l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~-i~~~~g~~~~~--~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l 433 (594)
...++.+|.+++..++.....-+...-+.. +.+++|.+... ..+++..+...++++.+|.++||++||+..
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l------ 84 (392)
T PRK12382 11 SSANFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSA------ 84 (392)
T ss_pred CcccccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHH------
Confidence 446778888877766654432233333332 45678988764 388999999999999999999999985532
Q ss_pred HHHHHHHHHH---HHHHhc------cCchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHH
Q 007654 434 AVAQFVMAIG---HIFLGM------GWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVF 504 (594)
Q Consensus 434 ~~~~~~~~~~---~ll~~~------~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~ 504 (594)
....++..++ ..+... .+...+++.-++.|++.+.........+.|.+..|+.++..++...+...|.. +
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~-~ 163 (392)
T PRK12382 85 LQGMLACGLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALA-A 163 (392)
T ss_pred HHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHH-H
Confidence 2111222221 111111 12235677788899999988877788899999999999999998888777766 5
Q ss_pred HHHHHHHHHHhh
Q 007654 505 SGLIASYIYDHE 516 (594)
Q Consensus 505 ~~~l~G~iyd~~ 516 (594)
+|.+.+.+++..
T Consensus 164 g~~~~~~l~~~~ 175 (392)
T PRK12382 164 GAPLGLLLHSHF 175 (392)
T ss_pred HHHHHHHHHhcc
Confidence 898988888754
No 146
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=98.43 E-value=1.9e-06 Score=93.00 Aligned_cols=152 Identities=15% Similarity=0.119 Sum_probs=105.7
Q ss_pred hcHHHHHHHHHHHhhhcchhheecchHHHHHHhCCCcch--hHHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHH
Q 007654 359 IKADFWLIFFSLLLGSGSGLTVIDNLGQMSQSLGYDNTH--IFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVA 436 (594)
Q Consensus 359 ~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~~~g~~~~~--~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~ 436 (594)
++...|.....+....+.+ +..+...++.+++|.+..+ ..++++.++..++.+.+|.+.||++||+.. ...
T Consensus 12 ~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l------~~~ 84 (402)
T TIGR00897 12 PLNLLWGYIGVVVFMTGDG-LEQGWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTM------MIG 84 (402)
T ss_pred CchhhHHHHHHHHHHHhhh-hHHHhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHH------HHH
Confidence 3344444444455555555 3445667888899888754 378999999999999999999999885532 223
Q ss_pred HHHHHHHHHHH---hc--cCchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHH
Q 007654 437 QFVMAIGHIFL---GM--GWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASY 511 (594)
Q Consensus 437 ~~~~~~~~ll~---~~--~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~ 511 (594)
..+..++.+++ .. .+...+++...+.|++++.........+.+.+..|+-|+..|+...+..+|..+++|.+.+.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~ 164 (402)
T TIGR00897 85 LLLWCVGHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSY 164 (402)
T ss_pred HHHHHHHHHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33333333221 22 23344566777778888877666677788999899999999999988888864468888888
Q ss_pred HHHhhh
Q 007654 512 IYDHEA 517 (594)
Q Consensus 512 iyd~~~ 517 (594)
+.|..+
T Consensus 165 l~~~~g 170 (402)
T TIGR00897 165 AIPAFG 170 (402)
T ss_pred cccccc
Confidence 887654
No 147
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.41 E-value=2.1e-06 Score=92.22 Aligned_cols=171 Identities=16% Similarity=0.135 Sum_probs=111.1
Q ss_pred cHHHHHHHHHHHhhhcchhheecchHHHHH-HhCCCcchh--HHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHH
Q 007654 360 KADFWLIFFSLLLGSGSGLTVIDNLGQMSQ-SLGYDNTHI--FVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVA 436 (594)
Q Consensus 360 t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~-~~g~~~~~~--~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~ 436 (594)
||+||.+....++....--.+...+....+ ++|.+..+. .+++..+...++++.+|+++||++||+..... ...
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~---~~~ 77 (396)
T TIGR00882 1 NTNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWI---ISG 77 (396)
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHH---HHH
Confidence 689999987777665554444445555554 468887644 88999999999999999999999986643111 111
Q ss_pred HHHHHHHHHHHhccC------chhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHH
Q 007654 437 QFVMAIGHIFLGMGW------PGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIAS 510 (594)
Q Consensus 437 ~~~~~~~~ll~~~~~------~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G 510 (594)
..+.....+.+...+ ...+.+..++.|++++.........+.|. .|+.+.+||.......+|.. ++|.+.|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~g~~-~g~~~~g 154 (396)
T TIGR00882 78 LLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKV--SRNSNFEYGKARMFGCVGWA-LCASIAG 154 (396)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHh--hhhcccccchhhhhcccHHH-HHHHHHh
Confidence 111111111111111 11234455677888888888887777764 35556777877777777776 5888888
Q ss_pred HHHHhhhhcccCcccccccccccccCCCCCCCCCccccCcccHHHHHHHHHHHHHHHHHHH
Q 007654 511 YIYDHEAEKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTSMIMSGLCIVAVILSM 571 (594)
Q Consensus 511 ~iyd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~ 571 (594)
.++|. + ++..|.+.+.++++..++.+
T Consensus 155 ~l~~~-~----------------------------------~~~~f~~~~~~~~~~~~~~~ 180 (396)
T TIGR00882 155 ILFSI-D----------------------------------PQIVFWLGSGFALILMLLLM 180 (396)
T ss_pred hhhcc-C----------------------------------chHHHHHHHHHHHHHHHHHH
Confidence 88753 1 67788888877777665543
No 148
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.37 E-value=6.7e-06 Score=89.04 Aligned_cols=171 Identities=15% Similarity=0.206 Sum_probs=118.0
Q ss_pred hcHHHHHHHHHHHhhhcchhheecchHH-HHHHhCCCcchh--HHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHH
Q 007654 359 IKADFWLIFFSLLLGSGSGLTVIDNLGQ-MSQSLGYDNTHI--FVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAV 435 (594)
Q Consensus 359 ~t~~Fwll~~~~~~~~g~Gl~vi~n~~~-i~~~~g~~~~~~--~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~ 435 (594)
+-++.+++ ...++...+.-++..-+.. +.+++|.+.... ..++..+...+.++.+|.++||++||+. +..
T Consensus 9 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~------l~~ 81 (400)
T PRK11646 9 NLGKYFLL-IDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPM------IVT 81 (400)
T ss_pred cccHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHH------HHH
Confidence 33554444 4444433333333333333 345678876543 6777788888889999999999988443 233
Q ss_pred HHHHHHHHHHHHh-ccCchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHH
Q 007654 436 AQFVMAIGHIFLG-MGWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYD 514 (594)
Q Consensus 436 ~~~~~~~~~ll~~-~~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd 514 (594)
...+..++.++.. ..+...+++..++.|++.|.......+++.|.+..++.++.+|+......+|.. ++|.+.|.+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~-ig~~l~g~l~- 159 (400)
T PRK11646 82 GMLMRAAGFATMAIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAV-IGALLGSWLL- 159 (400)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH-
Confidence 4444444444333 234445777778889988877777888999999999999999999999999887 5999999998
Q ss_pred hhhhcccCcccccccccccccCCCCCCCCCccccCcccHHHHHHHHHHHHHHHHHHHH
Q 007654 515 HEAEKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTSMIMSGLCIVAVILSMI 572 (594)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~~ 572 (594)
..+ ++..|.+.+..++++.++..+
T Consensus 160 ~~g----------------------------------~~~~f~~~~~~~~~~~i~~~~ 183 (400)
T PRK11646 160 QYD----------------------------------FRLVCATGAVLFVLAAAFNAW 183 (400)
T ss_pred Hhh----------------------------------HHHHHHHHHHHHHHHHHHHHH
Confidence 332 788898887777666555443
No 149
>PRK03893 putative sialic acid transporter; Provisional
Probab=98.36 E-value=5.8e-06 Score=91.33 Aligned_cols=149 Identities=15% Similarity=0.212 Sum_probs=111.3
Q ss_pred HHHHHHHHHHHhhhcchhheecchHHHHHHhCCCcch--hHHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHHH
Q 007654 361 ADFWLIFFSLLLGSGSGLTVIDNLGQMSQSLGYDNTH--IFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQF 438 (594)
Q Consensus 361 ~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~~~g~~~~~--~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~ 438 (594)
+.++.+++..++......+...-..++.+++|.+..+ ..++...+...++.+..|+++||++||+. +.....
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~------~~~~~~ 93 (496)
T PRK03893 20 KAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLA------MVISIV 93 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHH------HHHHHH
Confidence 4666777666654444444444456677788888754 37888999999999999999999988543 233344
Q ss_pred HHHHHHHHHhc-cCchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHHhh
Q 007654 439 VMAIGHIFLGM-GWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYDHE 516 (594)
Q Consensus 439 ~~~~~~ll~~~-~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~ 516 (594)
+..++.++... .+...+++..++.|++.|..+.....++.|.|..|+-++-.++...+..+|.. ++|.+.+.+.+..
T Consensus 94 ~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~-~~~~~~~~l~~~~ 171 (496)
T PRK03893 94 LFSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAV-VAAQVYSLVVPVW 171 (496)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhccC
Confidence 44444443332 34456778889999999999999999999999999899999999999889887 5899999887744
No 150
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=98.35 E-value=8.6e-06 Score=87.84 Aligned_cols=148 Identities=15% Similarity=0.267 Sum_probs=109.5
Q ss_pred HHHHHHHHHHHhhhcchhhe--ecc-hHHHHHHhCCCcch--hHHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHH
Q 007654 361 ADFWLIFFSLLLGSGSGLTV--IDN-LGQMSQSLGYDNTH--IFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAV 435 (594)
Q Consensus 361 ~~Fwll~~~~~~~~g~Gl~v--i~n-~~~i~~~~g~~~~~--~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~ 435 (594)
+.-|++...++++.....++ ++- +.+|.+++|.+..+ ..+++..++..++.+..|.++||++||+. +..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~------l~~ 79 (393)
T PRK09705 6 PLNFMLLVLVLIGLNMRPLLTSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRS------VAI 79 (393)
T ss_pred chHHHHHHHHHHHHHcchhhhccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHH------HHH
Confidence 45577777777776555333 222 33455567887654 38889999999999999999999999654 245
Q ss_pred HHHHHHHHHHHHhc-cCchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHH
Q 007654 436 AQFVMAIGHIFLGM-GWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYD 514 (594)
Q Consensus 436 ~~~~~~~~~ll~~~-~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd 514 (594)
..++.+++.++... .+...+++.-++.|++.|......+.++.|+|. ++.+...|....+..+|.. +++.+.+.+.+
T Consensus 80 ~~~l~~~~~~~~~~a~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~-~g~~~~~~l~~ 157 (393)
T PRK09705 80 SLLLIAVGALMRELYPQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGG-LGAAITPWLVQ 157 (393)
T ss_pred HHHHHHHHHHHHHHCcchHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 55556666655443 345567888999999999999999999999996 7789998888877777776 47777777776
Q ss_pred hh
Q 007654 515 HE 516 (594)
Q Consensus 515 ~~ 516 (594)
+.
T Consensus 158 ~~ 159 (393)
T PRK09705 158 HS 159 (393)
T ss_pred hc
Confidence 53
No 151
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.35 E-value=3.4e-06 Score=75.03 Aligned_cols=132 Identities=12% Similarity=0.198 Sum_probs=99.9
Q ss_pred HHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHhc-cCchhHHHHHHHHHhhhhhccchhHHHHHH
Q 007654 401 SMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLGM-GWPGAMYVGTLLIGLGYGAHWAIVPAAASE 479 (594)
Q Consensus 401 sl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~~-~~~~~l~~~~~liG~~~G~~~~l~p~i~s~ 479 (594)
+..++.+.++++.+|++.||++||+.. .....+..++.++... .+...+.+...+.|++.|.........+.|
T Consensus 5 ~~~~~~~~~~~~~~g~~~d~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 78 (141)
T TIGR00880 5 AGYALGQLIYSPLSGLLTDRFGRKPVL------LVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIAD 78 (141)
T ss_pred EeehhHHHHHHhhHHHHHhhcchhHHH------HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 456788899999999999999885532 2333333344333322 344456677889999999999999999999
Q ss_pred hhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHHhhhhcccCcccccccccccccCCCCCCCCCccccCcccHHHHHHH
Q 007654 480 LFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYDHEAEKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTSMIM 559 (594)
Q Consensus 480 ~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f~i~ 559 (594)
.+..++.++..++......+|.. ++|.+.+.+.|.. .++..|.+.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~----------------------------------~~~~~~~~~ 123 (141)
T TIGR00880 79 IYPPEERGVALGLMSAGIALGPL-LGPPLGGVLAQFL----------------------------------GWRAPFLFL 123 (141)
T ss_pred HCChhhhhHHHHHHHHhHHHHHH-HhHHhHHHHhccc----------------------------------chHHHHHHH
Confidence 99999999999999999989887 5899999888644 377888888
Q ss_pred HHHHHHHHHHHHHH
Q 007654 560 SGLCIVAVILSMIL 573 (594)
Q Consensus 560 ~~~~~~a~~ls~~l 573 (594)
...++++.+....+
T Consensus 124 ~~~~~~~~~~~~~~ 137 (141)
T TIGR00880 124 AILALAAFILLAFL 137 (141)
T ss_pred HHHHHHHHHHHhhc
Confidence 87777766665543
No 152
>PRK11462 putative transporter; Provisional
Probab=98.34 E-value=0.00013 Score=80.87 Aligned_cols=158 Identities=11% Similarity=0.069 Sum_probs=87.2
Q ss_pred HHHHhhcHHHHHHHHHHHhhhcchhheecchHHHHHH-hCCCcc-hhHHHHHHHhhhhhcccccchhhhhhhccCCchhH
Q 007654 354 LTQALIKADFWLIFFSLLLGSGSGLTVIDNLGQMSQS-LGYDNT-HIFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPV 431 (594)
Q Consensus 354 ~~e~l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~~-~g~~~~-~~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~ 431 (594)
+++.++++.|+.+....++....-...........+- .|.+.. .....+..+.+.+|-++++.++||+++|+..
T Consensus 221 l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~---- 296 (460)
T PRK11462 221 LRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWILGTPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIF---- 296 (460)
T ss_pred HHHHhCChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHH----
Confidence 3567788888877655433322111111112222222 222221 2355677788889999999999999875321
Q ss_pred HHHHHHHHHHHHHHHHhccC--chhHHHHHHHHHhhhhhccchhHHHHHHh-------hccCchhhhhhHHHhhhhHHHH
Q 007654 432 AMAVAQFVMAIGHIFLGMGW--PGAMYVGTLLIGLGYGAHWAIVPAAASEL-------FGLKKFGALYNFLTLANPAGSL 502 (594)
Q Consensus 432 ~l~~~~~~~~~~~ll~~~~~--~~~l~~~~~liG~~~G~~~~l~p~i~s~~-------FG~k~~g~nyg~~~~a~~~g~~ 502 (594)
. .........+.+++.... ...+++...+.|+..|....+..++++|. .|.|+=|..|+......=+|..
T Consensus 297 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~a 375 (460)
T PRK11462 297 W-WTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLA 375 (460)
T ss_pred H-HHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHH
Confidence 1 111111111222222222 22345556667877777666655666654 6788888888776555555555
Q ss_pred HHHHHHHHHHHHhhh
Q 007654 503 VFSGLIASYIYDHEA 517 (594)
Q Consensus 503 ~~~~~l~G~iyd~~~ 517 (594)
+++.+.|.+.+..|
T Consensus 376 -lg~~i~g~iL~~~G 389 (460)
T PRK11462 376 -FGGALIGWMLAYGG 389 (460)
T ss_pred -HHHHHHHHHHHHcC
Confidence 46777888887665
No 153
>PRK12307 putative sialic acid transporter; Provisional
Probab=98.33 E-value=8e-06 Score=88.29 Aligned_cols=127 Identities=13% Similarity=0.157 Sum_probs=96.5
Q ss_pred chHHHHHHhCCCcch--hHHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHhc-cCchhHHHHH
Q 007654 383 NLGQMSQSLGYDNTH--IFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLGM-GWPGAMYVGT 459 (594)
Q Consensus 383 n~~~i~~~~g~~~~~--~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~~-~~~~~l~~~~ 459 (594)
....|.++.|.++.+ ...++..+...+|.+.+|+++||++||+. +.....+..++.++... .+...+++.-
T Consensus 40 ~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~------l~~~~~~~~~~~~~~~~~~~~~~l~~~r 113 (426)
T PRK12307 40 IMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPL------MMWSIVAYSVGTGLSGLASGVIMLTLSR 113 (426)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHH------HHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 334455678887654 37788999999999999999999988543 23444444455444332 3345677888
Q ss_pred HHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHHhh
Q 007654 460 LLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYDHE 516 (594)
Q Consensus 460 ~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~ 516 (594)
.+.|++.|..+.....++.|.|..|+-++..|+...+..+|.. +++.+.+.+.|..
T Consensus 114 ~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~-~~~~l~~~l~~~~ 169 (426)
T PRK12307 114 FIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNI-IAAYFMPSFAEAY 169 (426)
T ss_pred HHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHH-HHHHHHHHHcccC
Confidence 9999999999999999999999999999999999988888887 4777777776543
No 154
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.32 E-value=9.3e-05 Score=82.82 Aligned_cols=121 Identities=22% Similarity=0.132 Sum_probs=89.8
Q ss_pred ccccccHHHH-hhhCCChhhHHHHHHHHhhhhhc-ccchhhhhchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHH
Q 007654 34 LFGSISPVIK-SSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLW 111 (594)
Q Consensus 34 ~fS~ys~~Lk-~~lg~sq~~l~~i~~a~~~G~~~-gi~~G~l~D~~gp~~~l~iG~~~~~~Gy~~~~l~~~g~i~~~s~~ 111 (594)
.-+.|+.... +.++.+....++......+|..+ +++.|.+.|++|+|.+++++.++..++-.+. ... ++++
T Consensus 100 ~~~~~s~~~~~~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~-----a~a--~~~~ 172 (521)
T KOG0255|consen 100 GSSVYSIVSEWNLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILT-----AFA--PNYW 172 (521)
T ss_pred CCCcccccchhceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHH-----HHh--CcHH
Confidence 3445555554 56777777777777777888866 6679999999999999999888765555432 222 3688
Q ss_pred HHHHHHHhhccccchhhhhHHHHHHHhc-CCCCCceehhhHhhhhhhHHHHH
Q 007654 112 AMCILIFVGNNGETYFNTAALVSCVQNF-PKSRGPVVGILKGFAGLGGAILT 162 (594)
Q Consensus 112 ~l~~~~~l~g~G~~~~~taal~t~~k~F-P~~RG~~~Gl~~a~~GLSa~i~s 162 (594)
.++++=++.|++.+..++.+....+.++ |++|+.+..+ ..++-.++.+..
T Consensus 173 ~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~ 223 (521)
T KOG0255|consen 173 MFLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLP 223 (521)
T ss_pred HHHHHHHHHHhhccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHH
Confidence 8888888999988888899999999999 5779999888 555555554443
No 155
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=98.31 E-value=8.6e-06 Score=89.89 Aligned_cols=153 Identities=15% Similarity=0.105 Sum_probs=103.0
Q ss_pred HHHHHHHHHHHhhhcchhheec----chHHHHHHhCCCcchh--HHHHHHHhhhhhcccccchhhhhhhccCCchhHHHH
Q 007654 361 ADFWLIFFSLLLGSGSGLTVID----NLGQMSQSLGYDNTHI--FVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMA 434 (594)
Q Consensus 361 ~~Fwll~~~~~~~~g~Gl~vi~----n~~~i~~~~g~~~~~~--~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~ 434 (594)
+.+|..+...+++...-.+.=+ -..++.+++|.+..+. ..+.+.+..+++.+.+|+++||++||+......+ .
T Consensus 25 ~~~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~-~ 103 (467)
T PRK09556 25 KPFMQSYLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLI-L 103 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHH-H
Confidence 4466666666655443222112 2445667888877643 7889999999999999999999999665321111 1
Q ss_pred HHHHHHHHHHHHHhc-cCchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHH
Q 007654 435 VAQFVMAIGHIFLGM-GWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIY 513 (594)
Q Consensus 435 ~~~~~~~~~~ll~~~-~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iy 513 (594)
.......++.++... .+...+.+.-++.|++.|..+.....+++|+|..++.|+..|+...+..+|..+ ++.+...+.
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l-~~~i~~~~~ 182 (467)
T PRK09556 104 SAICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAG-AGGVALWGA 182 (467)
T ss_pred HHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhH-HHHHHHHHH
Confidence 111111222211111 234456677788899999999999999999999999999999999888888874 777766655
Q ss_pred Hh
Q 007654 514 DH 515 (594)
Q Consensus 514 d~ 515 (594)
+.
T Consensus 183 ~~ 184 (467)
T PRK09556 183 NY 184 (467)
T ss_pred Hh
Confidence 43
No 156
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.26 E-value=1.1e-05 Score=85.12 Aligned_cols=125 Identities=15% Similarity=0.239 Sum_probs=94.2
Q ss_pred hHHHHHHhCCCcchh--HHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHhccCchhHHHHHHH
Q 007654 384 LGQMSQSLGYDNTHI--FVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLGMGWPGAMYVGTLL 461 (594)
Q Consensus 384 ~~~i~~~~g~~~~~~--~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~~~~~~~l~~~~~l 461 (594)
+.++.+++|.+..+. ..++..+...++.+.+|.++||++||+.. .....+..++.+.....+...+++..++
T Consensus 23 lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~------~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 96 (355)
T TIGR00896 23 LPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSV------AAGLLLIAAGILIRSAPGTALLFAGTAL 96 (355)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHH------HHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 345667788887643 78999999999999999999999986532 2222333334333333344566778888
Q ss_pred HHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHHhh
Q 007654 462 IGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYDHE 516 (594)
Q Consensus 462 iG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~ 516 (594)
.|++.|......+.++.|.|. ++-++..|+...+..+|.. +++.+.+.+.|..
T Consensus 97 ~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~-i~~~~~~~l~~~~ 149 (355)
T TIGR00896 97 IGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAA-LAAAATVPLAQHS 149 (355)
T ss_pred HHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHH-HHHHHHHHHHHhh
Confidence 999999999999999999994 7889999998888888887 4788888887654
No 157
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.26 E-value=8.8e-06 Score=99.29 Aligned_cols=155 Identities=12% Similarity=0.144 Sum_probs=110.6
Q ss_pred HHhhcHHHHHHHHHHHhhhcchhheecchHHHH-HHhCCCcc----hhHHHHHHHhhhhhcccccchhhhhhhccCCchh
Q 007654 356 QALIKADFWLIFFSLLLGSGSGLTVIDNLGQMS-QSLGYDNT----HIFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRP 430 (594)
Q Consensus 356 e~l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~-~~~g~~~~----~~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~ 430 (594)
+.+++++|+.++++.++......++..-+.+.. .+.+.+.. ....+++.+...++.+.+|+++||++||+..
T Consensus 4 ~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l--- 80 (1146)
T PRK08633 4 NLLKIIGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVI--- 80 (1146)
T ss_pred chhhhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHH---
Confidence 467899999999888886555444433333333 23444332 2356788888999999999999999996532
Q ss_pred HHHHH-HHHHHHHHHHH-HhccCchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHH
Q 007654 431 VAMAV-AQFVMAIGHIF-LGMGWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLI 508 (594)
Q Consensus 431 ~~l~~-~~~~~~~~~ll-~~~~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l 508 (594)
.... ..++..+...+ ........+++.-++.|++.|.......++++|++..++.++..|+..++..+|.. +++.+
T Consensus 81 -~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~-lg~~l 158 (1146)
T PRK08633 81 -RIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAIL-AGTAL 158 (1146)
T ss_pred -HHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHH-HHHHH
Confidence 1111 11111111111 12233456777888999999999999999999999999999999999999999887 59999
Q ss_pred HHHHHHh
Q 007654 509 ASYIYDH 515 (594)
Q Consensus 509 ~G~iyd~ 515 (594)
+|.+.+.
T Consensus 159 ~~~l~~~ 165 (1146)
T PRK08633 159 FSFLFES 165 (1146)
T ss_pred HHHHHHh
Confidence 9999886
No 158
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.26 E-value=7.7e-06 Score=87.91 Aligned_cols=148 Identities=13% Similarity=0.066 Sum_probs=106.6
Q ss_pred chHHHHHHhCCCcchh--HHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHhc-cCchhHHHHH
Q 007654 383 NLGQMSQSLGYDNTHI--FVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLGM-GWPGAMYVGT 459 (594)
Q Consensus 383 n~~~i~~~~g~~~~~~--~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~~-~~~~~l~~~~ 459 (594)
-+.++.+++|.++.+. ..+.+.+...++.+.+|+++||++||+.. .........+.+.... .+...+.+.=
T Consensus 13 ~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~------~~~~~~~~~~~~~~~~~~~~~~l~~~R 86 (368)
T TIGR00903 13 VLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFL------FGSLATFAAAAGRLLDPFNYEWLLACQ 86 (368)
T ss_pred hHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHH------HHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 3456777888887653 78889999999999999999999874321 1122222222221222 3445677888
Q ss_pred HHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHHhhhhcccCcccccccccccccCCCC
Q 007654 460 LLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYDHEAEKQHQPHHHLLNAGSIFTSMPR 539 (594)
Q Consensus 460 ~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (594)
++.|++.|...... ..++|+|-.|+-++..++...+..+|.. +++.+.+.+.+..
T Consensus 87 ~l~G~g~~~~~~~~-~~~~~~~~~~~r~~a~~~~~~~~~lG~~-l~~~~~~~l~~~~----------------------- 141 (368)
T TIGR00903 87 LLAALGQPFLLNAF-APAASQIREERRDLVISLLSFAMYLGII-FALAAGLKIYTAG----------------------- 141 (368)
T ss_pred HHHHhHhHHHHHHH-HHHHHHcCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHcc-----------------------
Confidence 88999998654334 4458999999999999999999999998 4888888877643
Q ss_pred CCCCCccccCcccHHHHHHHHHHHHHHHHHHHH
Q 007654 540 VDEPLKCEGSICYFLTSMIMSGLCIVAVILSMI 572 (594)
Q Consensus 540 ~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~~ 572 (594)
-+|..|++.+.++++..++..+
T Consensus 142 -----------gWr~~f~~~~~l~~~~~~~~~~ 163 (368)
T TIGR00903 142 -----------GLQLLIIPIAAVAAAGIILVLA 163 (368)
T ss_pred -----------chHHHHHHHHHHHHHHHHHHHH
Confidence 2899999988887776655544
No 159
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.25 E-value=0.00021 Score=79.44 Aligned_cols=184 Identities=15% Similarity=0.055 Sum_probs=112.0
Q ss_pred HHHHHHHHHHHhhhcchhheecc-hHHHHHHh-CCCc-c-hh------HHHHHHHhhhhhcccccchhhhhhhccCC-ch
Q 007654 361 ADFWLIFFSLLLGSGSGLTVIDN-LGQMSQSL-GYDN-T-HI------FVSMISIWNFLGRVGGGYFSEIIVRDYAY-PR 429 (594)
Q Consensus 361 ~~Fwll~~~~~~~~g~Gl~vi~n-~~~i~~~~-g~~~-~-~~------~Vsl~si~n~~GRl~~G~lsD~l~r~~~~-~r 429 (594)
+.+|.+.++.++.+.+=..+... ...++++. +.++ . +. .-+.-.+.|++--.+++++.+++.|+... .+
T Consensus 258 ~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~ 337 (477)
T TIGR01301 258 RPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAGKR 337 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchh
Confidence 56777777777765544433333 33344442 2221 1 00 12222233333333666777777776542 34
Q ss_pred hHHHHHHHHHHHHHHHH--Hhcc------C--------------chhHHHHHHHHHhhhhhccchhHHHHHHhhc--cCc
Q 007654 430 PVAMAVAQFVMAIGHIF--LGMG------W--------------PGAMYVGTLLIGLGYGAHWAIVPAAASELFG--LKK 485 (594)
Q Consensus 430 ~~~l~~~~~~~~~~~ll--~~~~------~--------------~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG--~k~ 485 (594)
.|... ..+.+++++. +... . ...+.+...++|++|...+++==++++++=- .++
T Consensus 338 ~~~~s--~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~ 415 (477)
T TIGR01301 338 LWGIV--NIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNLGAG 415 (477)
T ss_pred HHHHH--HHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCC
Confidence 44433 3333333322 2111 0 1456778889999999999887788888776 468
Q ss_pred hhhhhhHHHhhhhHHHHHHHHHHHHHHHHhhhhcccCcccccccccccccCCCCCCCCCccccCcccHHHHHHHHHHHHH
Q 007654 486 FGALYNFLTLANPAGSLVFSGLIASYIYDHEAEKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTSMIMSGLCIV 565 (594)
Q Consensus 486 ~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~ 565 (594)
.|..-|++-.+..+..++ .....|.+.+..+. --...|.+.++..++
T Consensus 416 ~G~~mgilN~~I~lpQii-~sl~~g~~~~~~g~--------------------------------~~~~~~~~~gv~~~~ 462 (477)
T TIGR01301 416 QGLSMGVLNLAIVIPQII-VSLGSGPWDQLFGG--------------------------------GNLPAFVVGAVAAFV 462 (477)
T ss_pred CcchhhHHHHHHHHHHHH-HHHHHHHHHHHcCC--------------------------------CCeeHHHHHHHHHHH
Confidence 899999999998888886 45677776665541 145688888888888
Q ss_pred HHHHHHHHHhhhhh
Q 007654 566 AVILSMILVHRTTN 579 (594)
Q Consensus 566 a~~ls~~l~~r~r~ 579 (594)
|.++++++.-|.++
T Consensus 463 aa~~~~~~~~~~~~ 476 (477)
T TIGR01301 463 SGLLALILLPRPRV 476 (477)
T ss_pred HHHHHHHhCCCCCC
Confidence 98988887776653
No 160
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=98.24 E-value=2e-05 Score=85.03 Aligned_cols=105 Identities=28% Similarity=0.441 Sum_probs=81.6
Q ss_pred hHHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHhc-cC-c--hhHHHHHHHHHhhhhhccchh
Q 007654 398 IFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLGM-GW-P--GAMYVGTLLIGLGYGAHWAIV 473 (594)
Q Consensus 398 ~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~~-~~-~--~~l~~~~~liG~~~G~~~~l~ 473 (594)
...++..+...++.+.+|+++||++||+.. .+...+..++.++... .. . ..+++.-.+.|++.|..+...
T Consensus 75 ~~~~~~~~~~~i~~~~~g~l~d~~grr~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~ 148 (481)
T TIGR00879 75 LVVSIFLVGGFIGALFAGWLSDRFGRKKSL------LIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALV 148 (481)
T ss_pred HHHHHHHHHHHHHHHHhhHhhhhhhhHHHH------HHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHH
Confidence 378899999999999999999999985432 3333344444433321 22 2 257778899999999999999
Q ss_pred HHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHH
Q 007654 474 PAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIA 509 (594)
Q Consensus 474 p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~ 509 (594)
..+++|++..|+-++..++...+..+|.. +++.+.
T Consensus 149 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~-~~~~~~ 183 (481)
T TIGR00879 149 PMYLSEIAPKALRGALTSLYQLAITFGIL-VAYGFG 183 (481)
T ss_pred HHHHHccCChhhhhhhhhHHHHHHHHHHH-HHHHHH
Confidence 99999999999999999999888888887 477665
No 161
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=98.23 E-value=1.5e-05 Score=85.47 Aligned_cols=123 Identities=15% Similarity=0.204 Sum_probs=89.7
Q ss_pred HHHHhCCCcch--hHHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHHHHHHHH---HHHHh-cc-----CchhH
Q 007654 387 MSQSLGYDNTH--IFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIG---HIFLG-MG-----WPGAM 455 (594)
Q Consensus 387 i~~~~g~~~~~--~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~---~ll~~-~~-----~~~~l 455 (594)
+.+++|.++.+ ...++..+...++.+.+|.++||++||+.. ....++..++ +.+.. .. ....+
T Consensus 42 i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 115 (399)
T PRK05122 42 VHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAV------VFGLCGCALSGLLYLLAGLLAAWPVLSLLLL 115 (399)
T ss_pred HHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchH------HHHHHHHHHHHHHHHHhhhhhccchhHHHHH
Confidence 45677877654 378899999999999999999999996653 2222222222 11111 11 12246
Q ss_pred HHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHHhh
Q 007654 456 YVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYDHE 516 (594)
Q Consensus 456 ~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~ 516 (594)
++.-++.|++.|.........+.|.+..|+.++.-++...+..+|.. +++.+.+.+.+..
T Consensus 116 ~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~-~g~~l~~~l~~~~ 175 (399)
T PRK05122 116 LLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALA-IGAPLGVLLYHWG 175 (399)
T ss_pred HHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHH-HHHHHHHHHHHcc
Confidence 67778999999999888888899999999999999988777777765 5888888888754
No 162
>PTZ00207 hypothetical protein; Provisional
Probab=98.22 E-value=1.4e-05 Score=90.71 Aligned_cols=144 Identities=13% Similarity=0.130 Sum_probs=99.4
Q ss_pred HHHHHHHHHHHhhhcchhheecch--HHHHHHhCCCcchh-HHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHH
Q 007654 361 ADFWLIFFSLLLGSGSGLTVIDNL--GQMSQSLGYDNTHI-FVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQ 437 (594)
Q Consensus 361 ~~Fwll~~~~~~~~g~Gl~vi~n~--~~i~~~~g~~~~~~-~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~ 437 (594)
++||++...+.+...+|.++..++ .++.+++|++..+. .++-.+..-....+.+|+++||+++|+ .+.+..
T Consensus 25 ~Rw~~lva~~~~~~~~g~~y~fsv~s~~L~~~lgls~~~l~~i~svg~~~g~~~lp~G~L~Dr~G~R~------vllig~ 98 (591)
T PTZ00207 25 RRFALLVLGAFCSICTSFMYAFNLISGAMQARYNLTQRDLSTITTVGIAVGYFLLPYSFIYDYLGPRP------IFVLSM 98 (591)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHH------HHHHHH
Confidence 556677777777766777666544 56777789887643 222223333445667899999998744 234555
Q ss_pred HHHHHHHHHHhcc-------CchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHH
Q 007654 438 FVMAIGHIFLGMG-------WPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIAS 510 (594)
Q Consensus 438 ~~~~~~~ll~~~~-------~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G 510 (594)
++..++.++.... +...+++.-++.|++-|..+......+.++| +++-|...|+...+.++|+.++++...+
T Consensus 99 ll~~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~F-p~~RG~a~Gi~~~~~gLGsaI~~~l~~~ 177 (591)
T PTZ00207 99 TVFCLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVF-PSNRGAVVAIMKTFTGLGSAILGSIQLA 177 (591)
T ss_pred HHHHHHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-hhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5666666554332 3345667777889888888888888999999 5888999999999999999876765444
Q ss_pred H
Q 007654 511 Y 511 (594)
Q Consensus 511 ~ 511 (594)
.
T Consensus 178 l 178 (591)
T PTZ00207 178 F 178 (591)
T ss_pred H
Confidence 3
No 163
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=98.17 E-value=4e-05 Score=85.09 Aligned_cols=180 Identities=14% Similarity=0.128 Sum_probs=108.5
Q ss_pred HHHHHHHHHHHhhhcchhheecchHHHHHHhCCCcchh--HHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHHH
Q 007654 361 ADFWLIFFSLLLGSGSGLTVIDNLGQMSQSLGYDNTHI--FVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQF 438 (594)
Q Consensus 361 ~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~~~g~~~~~~--~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~ 438 (594)
+.++..|+.+++....-..+..-..++.+++|.+..+. ..++..++..+|.+++|+++||++||+.. ....+
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~------~~~~~ 109 (476)
T PLN00028 36 RAFHLSWISFFTCFVSTFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGS------AFLLM 109 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHH------HHHHH
Confidence 34444444444443332222223455677889876543 56677888899999999999999985432 22333
Q ss_pred HHHHHHHHHhc-cCchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHHhhh
Q 007654 439 VMAIGHIFLGM-GWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYDHEA 517 (594)
Q Consensus 439 ~~~~~~ll~~~-~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~~ 517 (594)
+..++.++... .+...+++.-++.|++.|... .....++|+|-.|+-|.-.|+......+|+. +++.+.+.+.+.-.
T Consensus 110 ~~~~~~~~~~~~~s~~~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~-~~~~~~~~i~~~~~ 187 (476)
T PLN00028 110 LTAPAVFCMSLVSSATGFIAVRFFIGFSLATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGG-VTQLLMPLVFPLIK 187 (476)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 33444433332 334456666778888887643 3456789999888889888887655445554 34445544444221
Q ss_pred hcccCcccccccccccccCCCCCCCCCccccCcccHHHHHHHHHHHHHHHHHHHHH
Q 007654 518 EKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTSMIMSGLCIVAVILSMIL 573 (594)
Q Consensus 518 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~~l 573 (594)
.. .|.+..-+|.+|.+.++++++..++..++
T Consensus 188 ~~-------------------------~~~~~~gWr~~f~i~g~l~l~~~l~~~~~ 218 (476)
T PLN00028 188 DA-------------------------GAPSFTAWRIAFFVPGLLHIIMGILVLTL 218 (476)
T ss_pred hc-------------------------CCcchhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 00 01111249999999988887666555543
No 164
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.15 E-value=0.00012 Score=77.57 Aligned_cols=145 Identities=14% Similarity=0.117 Sum_probs=94.2
Q ss_pred ccccccHHHHhhhCCChhhHHHHHHHHhhhhhc-ccchhhhhchhhhHHHHHHHHHHH-HHHHHHHHHHHhcCCCChhHH
Q 007654 34 LFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQN-FIGYGWVWLIVTGRAPVLPLW 111 (594)
Q Consensus 34 ~fS~ys~~Lk~~lg~sq~~l~~i~~a~~~G~~~-gi~~G~l~D~~gp~~~l~iG~~~~-~~Gy~~~~l~~~g~i~~~s~~ 111 (594)
.=|..++.+.+..|.+..|..+++..-+.|... ...+|+..|+.|+|....+-.+.. ..||+ +|.- +++.
T Consensus 96 ~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~i------s~~s--pnf~ 167 (528)
T KOG0253|consen 96 LLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVI------SGAS--PNFA 167 (528)
T ss_pred HHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHh------hcCC--CCee
Confidence 347789999999999999999999999999966 678999999999988654433321 12333 4543 3455
Q ss_pred HHHHHHHhhccccchhhhhHHHHHHHhc-C-CCCCceehhhHhhhhhhHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHH
Q 007654 112 AMCILIFVGNNGETYFNTAALVSCVQNF-P-KSRGPVVGILKGFAGLGGAILTQVYTMIHAPDHANLIFMVAVGPAMVVI 189 (594)
Q Consensus 112 ~l~~~~~l~g~G~~~~~taal~t~~k~F-P-~~RG~~~Gl~~a~~GLSa~i~s~i~~~~f~~~~~~fll~la~~~~~v~l 189 (594)
.+|+|-.+-++|.+- +.- ..+----| | .+|++-+=.. +++..+..+-..+.-..-+.-...+++|+.-+|.....
T Consensus 168 ~L~~f~~l~~~g~gg-~pv-~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~gwr~~l~~~~~pl~~~a 244 (528)
T KOG0253|consen 168 SLCVFRALWGFGVGG-LPV-DSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFGWRYLLFTSSTPLMFAA 244 (528)
T ss_pred hhhHHHHHHhccCCC-ccH-hHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHHHH
Confidence 667666666666664 222 22222234 7 4788776555 88888876666665443333345566666555554443
No 165
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.14 E-value=2.1e-05 Score=96.37 Aligned_cols=160 Identities=8% Similarity=0.022 Sum_probs=108.3
Q ss_pred HHHhhcHHHHHHHHHHHhhhcchhheecchHHHHH-HhCCCc----c---hhHHHHHHHhhhhhcccccchhhhhhhccC
Q 007654 355 TQALIKADFWLIFFSLLLGSGSGLTVIDNLGQMSQ-SLGYDN----T---HIFVSMISIWNFLGRVGGGYFSEIIVRDYA 426 (594)
Q Consensus 355 ~e~l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~-~~g~~~----~---~~~Vsl~si~n~~GRl~~G~lsD~l~r~~~ 426 (594)
++++|+++|+.+|+..++....--+.-..+..+.. .+..+. . ....+++.+...+.-+++|+++||++||+.
T Consensus 5 ~~l~~~~~f~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~ 84 (1140)
T PRK06814 5 LYLMKSRRFAPLFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKL 84 (1140)
T ss_pred hhhhhccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHH
Confidence 35789999999988877765332222222222221 221111 1 124556777788889999999999998553
Q ss_pred CchhHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHH
Q 007654 427 YPRPVAMAVAQFVMAIGHIFLGMGWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSG 506 (594)
Q Consensus 427 ~~r~~~l~~~~~~~~~~~ll~~~~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~ 506 (594)
.. +......+...++.+.+...+...+++..++.|++.+..+...-+++.|+|..++.++-.|++..+..+|.. ++|
T Consensus 85 ~~--~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~-igp 161 (1140)
T PRK06814 85 AK--ILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAIL-LGT 161 (1140)
T ss_pred HH--HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHH-HHH
Confidence 21 111111122222222222345567888999999999999999999999999999999999999999999887 599
Q ss_pred HHHHHHHHhhh
Q 007654 507 LIASYIYDHEA 517 (594)
Q Consensus 507 ~l~G~iyd~~~ 517 (594)
.+.|.+.+..+
T Consensus 162 ~l~g~l~~~~~ 172 (1140)
T PRK06814 162 IIGGLATISGN 172 (1140)
T ss_pred HHHHHHHhccc
Confidence 99999998553
No 166
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.12 E-value=0.00039 Score=75.06 Aligned_cols=122 Identities=17% Similarity=0.214 Sum_probs=95.5
Q ss_pred HhCCCcchh--HHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHhhhh
Q 007654 390 SLGYDNTHI--FVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLGMGWPGAMYVGTLLIGLGYG 467 (594)
Q Consensus 390 ~~g~~~~~~--~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~~~~~~~l~~~~~liG~~~G 467 (594)
++|.+..+. +--..++....|-++.|++.||++.|+.. +....++..+....+....+..+++..+++|+..|
T Consensus 282 ~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl-----~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G 356 (438)
T COG2270 282 DLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVL-----MIGLVILSIAALYLIFLEGELDFWILGLLVGTSLG 356 (438)
T ss_pred HcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceee-----hHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcc
Confidence 568877664 44567888899999999999999886433 22222233333323333445678889999999999
Q ss_pred hccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHHhhh
Q 007654 468 AHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYDHEA 517 (594)
Q Consensus 468 ~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~~ 517 (594)
+..+.-=+..++..-.++-++-||+-.+..=.+++ ++|++.+.+-|.++
T Consensus 357 ~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~-~gp~lv~v~t~iTg 405 (438)
T COG2270 357 GAQASSRSYLARLVPKGKEGRFFGLYALTGRAASF-LGPFLVAVITQITG 405 (438)
T ss_pred hHHHHHHHHHHHhCCCccccceeehhhhhhhHHHH-HHHHHHHHHHHHhc
Confidence 99999999999999999999999999888878888 69999999999997
No 167
>PRK03633 putative MFS family transporter protein; Provisional
Probab=98.12 E-value=1.9e-05 Score=84.43 Aligned_cols=150 Identities=18% Similarity=0.156 Sum_probs=109.6
Q ss_pred hcHHHHHHHHHHHhhhcchhheecchHHHHHHhCCCcch--hHHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHH
Q 007654 359 IKADFWLIFFSLLLGSGSGLTVIDNLGQMSQSLGYDNTH--IFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVA 436 (594)
Q Consensus 359 ~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~~~g~~~~~--~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~ 436 (594)
.++++|+++...++....-..+..-+.++.+++|.+..+ ...+...+.+.++++.+|+++||++||+.. ...
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~------~~~ 77 (381)
T PRK03633 4 YTRPVLLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSY------YLA 77 (381)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH------HHH
Confidence 457799998888775544344445566777788887654 388999999999999999999999995542 223
Q ss_pred HHHHHHHHHHHh-ccCchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHHh
Q 007654 437 QFVMAIGHIFLG-MGWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYDH 515 (594)
Q Consensus 437 ~~~~~~~~ll~~-~~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~ 515 (594)
..+..++.++.. ..+...+.+.-++.|++.|..+......+.+.+-.++-++..|....+..+|.. ++|.+.+.+.+.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~g~~~~~~l~~~ 156 (381)
T PRK03633 78 SLIFAAGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTV-LGQLLVSKVSTE 156 (381)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhccccc
Confidence 333344443333 234456777888889999988877777777887778889999998888888887 488888877654
No 168
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=98.11 E-value=6.1e-05 Score=81.27 Aligned_cols=174 Identities=13% Similarity=0.169 Sum_probs=145.8
Q ss_pred HHHHHHHHHHHhhhcchhheecchHHHHHHhCCCcchh--HHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHHH
Q 007654 361 ADFWLIFFSLLLGSGSGLTVIDNLGQMSQSLGYDNTHI--FVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQF 438 (594)
Q Consensus 361 ~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~~~g~~~~~~--~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~ 438 (594)
..-|.+.+.-|+....-.+...-+.||+++++.+..++ .||+++..-.+|-+....+.||+.||+ .+....+
T Consensus 13 ~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~------lLl~~l~ 86 (394)
T COG2814 13 LALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRR------LLLGLLA 86 (394)
T ss_pred HHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHH------HHHHHHH
Confidence 45667777777777788888899999999999987644 899999999999999999999997744 3455566
Q ss_pred HHHHHHHHHhc-cCchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHHhhh
Q 007654 439 VMAIGHIFLGM-GWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYDHEA 517 (594)
Q Consensus 439 ~~~~~~ll~~~-~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~~ 517 (594)
+..++.++.+. .+...+.++=++.|++-|..|++...+++|.=..++-++-=++++++..++-. +|.++..++=|.-|
T Consensus 87 lFi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v-~GvPLGt~ig~~~G 165 (394)
T COG2814 87 LFIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATV-LGVPLGTFLGQLFG 165 (394)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHH-HhccHHHHHHHHhh
Confidence 67777766544 44567888999999999999999999999999999999999999999988776 69999999999886
Q ss_pred hcccCcccccccccccccCCCCCCCCCccccCcccHHHHHHHHHHHHHHHHHHHHHHh
Q 007654 518 EKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTSMIMSGLCIVAVILSMILVH 575 (594)
Q Consensus 518 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~~l~~ 575 (594)
+|.+|.+.+.+++++.+.-....-
T Consensus 166 ----------------------------------WR~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 166 ----------------------------------WRATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred ----------------------------------HHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999998887666555444
No 169
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=98.11 E-value=3.4e-05 Score=84.78 Aligned_cols=170 Identities=17% Similarity=0.125 Sum_probs=109.9
Q ss_pred HHhhhcchhheecchHH-HHHHh--------CCCcch--hHHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHHH
Q 007654 370 LLLGSGSGLTVIDNLGQ-MSQSL--------GYDNTH--IFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQF 438 (594)
Q Consensus 370 ~~~~~g~Gl~vi~n~~~-i~~~~--------g~~~~~--~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~ 438 (594)
..+..|-...+++...+ +.+.. +.++.. ..++++.++..+|-+++|+++||++||+.. .+...
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~------~~~~~ 93 (479)
T PRK10077 20 GGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSL------KIAAV 93 (479)
T ss_pred HHHhcCcccceehHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH------HHHHH
Confidence 33445555555655544 33333 444332 478999999999999999999999996643 23333
Q ss_pred HHHHHHHHHhc----------cC---chhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHH
Q 007654 439 VMAIGHIFLGM----------GW---PGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFS 505 (594)
Q Consensus 439 ~~~~~~ll~~~----------~~---~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~ 505 (594)
+..++.+.... .+ ...+++.-++.|++.|+.+...+++++|++..|+-|+..|+...+..+|..+ +
T Consensus 94 l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~-~ 172 (479)
T PRK10077 94 LFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLV-V 172 (479)
T ss_pred HHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHH-H
Confidence 33333322211 11 1245677789999999999999999999999999999999988888888774 6
Q ss_pred HHHHHHHHHhhhhcccCcccccccccccccCCCCCCCCCccccCcccHHHHHHHHHHHHHHHHHHHH
Q 007654 506 GLIASYIYDHEAEKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTSMIMSGLCIVAVILSMI 572 (594)
Q Consensus 506 ~~l~G~iyd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~~ 572 (594)
+.+.+.+.+...... . +..-+|..|.+.+...++.+++..+
T Consensus 173 ~~~~~~~~~~~~~~~-------------------------~-~~~gWr~~f~~~~~~~~~~~~~~~~ 213 (479)
T PRK10077 173 YFVNYFIARSGDASW-------------------------L-NTDGWRYMFASEAIPALLFLMLLYF 213 (479)
T ss_pred HHHHHHHhccCcccc-------------------------c-ccCChHHHHHHHHHHHHHHHHHHHc
Confidence 544433332211000 0 1124899999887776665544433
No 170
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.11 E-value=4.2e-05 Score=86.77 Aligned_cols=176 Identities=18% Similarity=0.186 Sum_probs=119.4
Q ss_pred hcHHHHHHHHHHHhhhcch---hhee-cchHHHHHHhCCCcch-hHHHHHHHhhhhhcccccchhhhhhhccCCchhHHH
Q 007654 359 IKADFWLIFFSLLLGSGSG---LTVI-DNLGQMSQSLGYDNTH-IFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAM 433 (594)
Q Consensus 359 ~t~~Fwll~~~~~~~~g~G---l~vi-~n~~~i~~~~g~~~~~-~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l 433 (594)
++++|+..+..+.+..-+. +..- +-+.+|.+++|-++.. -.+....+.++++-.+.|.+||.+|||+ ++
T Consensus 38 ~s~~~i~~~~~~~~~~~~~~~~~~~~a~~l~~I~~diG~~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~------~~ 111 (599)
T PF06609_consen 38 RSPRFIASFAAFSLAVIAAYFVLVLPASILPYINADIGGSDNWSWFSTAWTLASAVSFPFVGRLSDLFGRRY------FF 111 (599)
T ss_pred eCHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHhcCCCccchHHHHHHHHHHHHHHHhhHHHHHHhcchH------HH
Confidence 6678888876665543322 2222 2356788899877654 3677888999999999999999999954 44
Q ss_pred HHHHHHHHHHHHHHhccC-chhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHH
Q 007654 434 AVAQFVMAIGHIFLGMGW-PGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYI 512 (594)
Q Consensus 434 ~~~~~~~~~~~ll~~~~~-~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~i 512 (594)
....++..+|+++-.... ...+..+..+.|++.|... +....++|.--.|+-+.-+.+......+... .+|.++..+
T Consensus 112 i~g~~l~vvG~Iv~atA~~~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~-~~~~ia~~~ 189 (599)
T PF06609_consen 112 IIGSLLGVVGSIVCATAQNMNTFIAGMVLYGVGAGVQE-LAALAISELVPNKWRGLGLAIASIPFIITTW-ISPLIAQLF 189 (599)
T ss_pred HHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHhhHHHH-HHHHHHHHhcccchhhhHhHHHHHHHHhhhc-ccHHHHHHh
Confidence 667777788877665433 4468889999999998876 5567799999888765544444433322222 244333332
Q ss_pred HHhhhhcccCcccccccccccccCCCCCCCCCccccCcccHHHHHHHHHHHHHHHHHHHHHHhh
Q 007654 513 YDHEAEKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTSMIMSGLCIVAVILSMILVHR 576 (594)
Q Consensus 513 yd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~~l~~r 576 (594)
..+ ..+|..|++....+.+++++..+..++
T Consensus 190 ~~~----------------------------------~~WRw~~~~~~i~~~i~~vl~~~fY~P 219 (599)
T PF06609_consen 190 AAH----------------------------------SGWRWIFYIFIIWSGIALVLIFFFYFP 219 (599)
T ss_pred ccC----------------------------------CCcchHHHHHHHHHHHHHHHHHHHhCC
Confidence 211 148999999999988888877765544
No 171
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.10 E-value=5.5e-05 Score=83.70 Aligned_cols=187 Identities=18% Similarity=0.197 Sum_probs=122.4
Q ss_pred hhcHHHHHHHHHHHhhhcchhheecchHHHHH-HhCCCcchh--HHHHHHHhhhhhcccccchhhhhhhccCCchhHHHH
Q 007654 358 LIKADFWLIFFSLLLGSGSGLTVIDNLGQMSQ-SLGYDNTHI--FVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMA 434 (594)
Q Consensus 358 l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~-~~g~~~~~~--~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~ 434 (594)
+.++.+|+-++.++++-..=.+.-.-..++.+ +++.+..+. .+++..+..+++|+..|.+.||+|.|+.. .
T Consensus 31 ~a~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~------~ 104 (462)
T PRK15034 31 IARRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWT------V 104 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHH------H
Confidence 45578898888877654443333333444444 678887654 78899999999999999999999885532 2
Q ss_pred HHHHHHHHHHHHHhc------cCchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHH----hhhhHHHHHH
Q 007654 435 VAQFVMAIGHIFLGM------GWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLT----LANPAGSLVF 504 (594)
Q Consensus 435 ~~~~~~~~~~ll~~~------~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~----~a~~~g~~~~ 504 (594)
+..++..+..++... .+...+++.-++.|++ |+.|...-..++++|-.|+.|+..|+.. ++..++..+
T Consensus 105 ~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l- 182 (462)
T PRK15034 105 FSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLV- 182 (462)
T ss_pred HHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHH-
Confidence 222333333333332 3445788888999998 8899999999999998888999999984 444444443
Q ss_pred HHHHHH-HHHHhhhhcccCcccccccccccccCCCCCCCCCccccCcccHHHHHHHHHHHHHHHHHHHHH
Q 007654 505 SGLIAS-YIYDHEAEKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTSMIMSGLCIVAVILSMIL 573 (594)
Q Consensus 505 ~~~l~G-~iyd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~~l 573 (594)
.|.+.+ .+++..|..... ... .+..-.+.++.+...+.+++.++.++.
T Consensus 183 ~p~~i~~~l~~~~G~~~~~----------------~~~-----g~~~~~~~~~~~~~~~~iv~~i~~~~~ 231 (462)
T PRK15034 183 APLVIFVPVFAFLGVNGVP----------------QAD-----GSVMSLANAAWIWVPLLAIATIAAWSG 231 (462)
T ss_pred HHHHHHHHHHHHhcccccc----------------ccc-----cchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 444332 355555422100 000 013357888888888888777777765
No 172
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.06 E-value=5.2e-05 Score=84.64 Aligned_cols=160 Identities=16% Similarity=0.108 Sum_probs=109.6
Q ss_pred hhcchhheecc-hHHHHHHhCCCcchh-HHHHHHHhhhhhcccccchhhhh-----hhccCCchhHHHHHHHHHHHHHHH
Q 007654 373 GSGSGLTVIDN-LGQMSQSLGYDNTHI-FVSMISIWNFLGRVGGGYFSEII-----VRDYAYPRPVAMAVAQFVMAIGHI 445 (594)
Q Consensus 373 ~~g~Gl~vi~n-~~~i~~~~g~~~~~~-~Vsl~si~n~~GRl~~G~lsD~l-----~r~~~~~r~~~l~~~~~~~~~~~l 445 (594)
..|...++++. +..+.++.|.+..++ .++.++..- +++++||.++||+ |||+ .|. ...++..+++..
T Consensus 23 ~~gl~~~~~~~~l~~~l~~~g~~~~~ig~~~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr----~~l-l~~~i~~~~~~~ 96 (491)
T PRK11010 23 ASGLPLALTSGTLQAWMTVENIDLKTIGFFSLVGQAY-VFKFLWSPLMDRYTPPFLGRRR----GWL-LATQLLLLVAIA 96 (491)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHcccccCCCCch----HHH-HHHHHHHHHHHH
Confidence 34444444444 444556667776543 444444443 6899999999998 5533 233 444444444433
Q ss_pred HHhcc----CchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHHhhhhccc
Q 007654 446 FLGMG----WPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYDHEAEKQH 521 (594)
Q Consensus 446 l~~~~----~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~~~~~~ 521 (594)
.+... +...+.+..++.+++.+..-....+++.|+|-.|+.|+.-++...+..+|.. +++.+.+.+.|+..
T Consensus 97 ~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~l-lg~~l~~~l~~~~~---- 171 (491)
T PRK11010 97 AMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAML-VSGGLALWLADRYL---- 171 (491)
T ss_pred HHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHH-HHHHHHHHHHhccc----
Confidence 33222 2234666777889999988889999999999999999999999999999887 57888888887321
Q ss_pred CcccccccccccccCCCCCCCCCccccCcccHHHHHHHHHHHHHHHHHHHH
Q 007654 522 QPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTSMIMSGLCIVAVILSMI 572 (594)
Q Consensus 522 ~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~~ 572 (594)
.+|..|.+.+.++++..+..++
T Consensus 172 -----------------------------GWr~~f~i~a~l~ll~~l~~~~ 193 (491)
T PRK11010 172 -----------------------------GWQGMYWLMAALLIPCIIATLL 193 (491)
T ss_pred -----------------------------CHHHHHHHHHHHHHHHHHHHHh
Confidence 3999999998887777665554
No 173
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.05 E-value=0.00016 Score=78.51 Aligned_cols=153 Identities=20% Similarity=0.260 Sum_probs=96.0
Q ss_pred chHHHHHHhCCCcchh------HH----HHHHHhhhh-hcccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHhcc-
Q 007654 383 NLGQMSQSLGYDNTHI------FV----SMISIWNFL-GRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLGMG- 450 (594)
Q Consensus 383 n~~~i~~~~g~~~~~~------~V----sl~si~n~~-GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~~~- 450 (594)
|.+.|.++.|..+.+. .| -++..+..+ |-.+..+++|+++|++.. ...+.++.+-++.+...
T Consensus 326 ~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq------~~GF~~~~i~~~~~~~~y 399 (538)
T KOG0252|consen 326 FQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQ------LMGFFIMTIFFFVIAGPY 399 (538)
T ss_pred HHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHH------HhhHHHHHHHHHHHcCCc
Confidence 6778888888754321 12 356666666 889999999999996532 33333444433333321
Q ss_pred -----Cchh--HH-HHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHHhhhhcccC
Q 007654 451 -----WPGA--MY-VGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYDHEAEKQHQ 522 (594)
Q Consensus 451 -----~~~~--l~-~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~~~~~~~ 522 (594)
.... +| +.-.+--++=++...+. -+|.|-.|-=|+-||+--...=.|+++ +...++..-|++-..
T Consensus 400 ~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfiv---paE~FParvR~t~hGIsAA~GK~GAiv-g~~~F~~~t~~~yp~--- 472 (538)
T KOG0252|consen 400 NQLENTIGFVVLYSLTFFFGNFGPNATTFIV---PAEIFPARVRSTCHGISAASGKAGAIV-GAFGFLYLTDHNYPP--- 472 (538)
T ss_pred ccccccCceeehHHHHHHHHhcCCCceeEEe---ehhhchHHHhhhhhhHHHHhccchHHH-HHHHhhHhhhccCCc---
Confidence 1111 22 12222223333333344 468899999999999987766678874 766666666644110
Q ss_pred cccccccccccccCCCCCCCCCccccCcccHHHHHHHHHHHHHHHHHHHHHH
Q 007654 523 PHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTSMIMSGLCIVAVILSMILV 574 (594)
Q Consensus 523 ~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~~l~ 574 (594)
. .-++.+|.+.++++.++.+.++++-
T Consensus 473 ----------------~----------~g~~~v~~i~~~~~~~gi~~T~l~p 498 (538)
T KOG0252|consen 473 ----------------N----------IGVRNVFIILAGCMLLGILFTLLIP 498 (538)
T ss_pred ----------------c----------ccchHHHHHHHHHHHHhHheeEEee
Confidence 0 1489999999999999999988876
No 174
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=98.05 E-value=7e-05 Score=78.97 Aligned_cols=145 Identities=8% Similarity=-0.062 Sum_probs=94.7
Q ss_pred HHHhCCCcch--hHHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHhc-cCchhHHHHHHHHHh
Q 007654 388 SQSLGYDNTH--IFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLGM-GWPGAMYVGTLLIGL 464 (594)
Q Consensus 388 ~~~~g~~~~~--~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~~-~~~~~l~~~~~liG~ 464 (594)
.+++|.++.. ..+++..+...+..+.+|.++||++||+.. . ....++..++.++... .+...+++...+.|.
T Consensus 25 ~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~----~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 99 (375)
T TIGR00899 25 SEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGL----I-LFCCLLAALACLLFAWNRNYFLLLVLGVLLSS 99 (375)
T ss_pred HcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHH----H-HHHHHHHHHHHHHHHhcchHHHHHHHHHHHHh
Confidence 4567887654 367888889999999999999999885532 2 2222223333323332 333345555566676
Q ss_pred hhhhccchhHHHHHHhhccCchh--hhhhHHHhhhhHHHHHHHHHHHHHHHHhhhhcccCcccccccccccccCCCCCCC
Q 007654 465 GYGAHWAIVPAAASELFGLKKFG--ALYNFLTLANPAGSLVFSGLIASYIYDHEAEKQHQPHHHLLNAGSIFTSMPRVDE 542 (594)
Q Consensus 465 ~~G~~~~l~p~i~s~~FG~k~~g--~nyg~~~~a~~~g~~~~~~~l~G~iyd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 542 (594)
..+........++.|+...+.-+ ..++....+..+|.. ++|.+.+.+.|..+
T Consensus 100 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-ig~~~~~~l~~~~~------------------------- 153 (375)
T TIGR00899 100 FASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWV-IGPPLAFWLALGFG------------------------- 153 (375)
T ss_pred hhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHH-HhhhHHHHHHHhcc-------------------------
Confidence 66666666666677776433322 236777777778876 58999999887653
Q ss_pred CCccccCcccHHHHHHHHHHHHHHHHHHHH
Q 007654 543 PLKCEGSICYFLTSMIMSGLCIVAVILSMI 572 (594)
Q Consensus 543 ~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~~ 572 (594)
+|..|.+.+..+++..++...
T Consensus 154 ---------~~~~f~~~~~~~~~~~~~~~~ 174 (375)
T TIGR00899 154 ---------FTVMFLTAALAFVLCGVLVWL 174 (375)
T ss_pred ---------cHHHHHHHHHHHHHHHHHHHH
Confidence 899999988877766665554
No 175
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.05 E-value=2.1e-05 Score=86.57 Aligned_cols=135 Identities=12% Similarity=0.119 Sum_probs=102.8
Q ss_pred HHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHH--hc-cCchhHHHHHHHHHhhhhhccchhHH
Q 007654 399 FVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFL--GM-GWPGAMYVGTLLIGLGYGAHWAIVPA 475 (594)
Q Consensus 399 ~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~--~~-~~~~~l~~~~~liG~~~G~~~~l~p~ 475 (594)
..+.+.++..++.+..|+++||++||+.. ....++..++.++. .. .....+++.-++.|++.|..+...+.
T Consensus 81 ~~s~~~~~~~~~~~~~g~l~dr~g~r~~l------~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~ 154 (465)
T TIGR00894 81 ILSSHFYGQIIIQIPVGYLAGKYVFKWSI------GIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHK 154 (465)
T ss_pred HHHHHHHHHHHHHcchHHHHHHhCcchhh------HHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHH
Confidence 78899999999999999999999986643 22233333333222 21 22345777888999999999999999
Q ss_pred HHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHHhhhhcccCcccccccccccccCCCCCCCCCccccCcccHHH
Q 007654 476 AASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYDHEAEKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLT 555 (594)
Q Consensus 476 i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~ 555 (594)
+++|+|..|+-|+-.|+...+..+|.. +++.+.+.+.|... .++..
T Consensus 155 ~~~~~~~~~~r~~~~~~~~~~~~~g~~-i~~~l~~~l~~~~~---------------------------------gw~~~ 200 (465)
T TIGR00894 155 IIVKWAPPKERSRLLGMSTSGFQLGTF-IFLPISGWLCESWG---------------------------------GWPMI 200 (465)
T ss_pred HHHhcCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhccC---------------------------------CCCee
Confidence 999999999999999999999999988 58999999887531 27888
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 007654 556 SMIMSGLCIVAVILSMIL 573 (594)
Q Consensus 556 f~i~~~~~~~a~~ls~~l 573 (594)
|++.+..+++..++...+
T Consensus 201 f~i~~~~~~~~~~~~~~~ 218 (465)
T TIGR00894 201 FYVFGIVGCAWSLLWFVF 218 (465)
T ss_pred hhhhhHHHHHHHHHHHHH
Confidence 988877766555444443
No 176
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=98.01 E-value=6.2e-05 Score=83.77 Aligned_cols=164 Identities=11% Similarity=0.074 Sum_probs=89.0
Q ss_pred hcCcccccccccHHH-HhhhCCChhhHHHHHHHHhhhhhc-ccchhhhhchhhhHHHHHHHHHHHHH-HHHHHHHHHhcC
Q 007654 28 CAGIGYLFGSISPVI-KSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFI-GYGWVWLIVTGR 104 (594)
Q Consensus 28 ~~Gt~Y~fS~ys~~L-k~~lg~sq~~l~~i~~a~~~G~~~-gi~~G~l~D~~gp~~~l~iG~~~~~~-Gy~~~~l~~~g~ 104 (594)
.....|.+..|.|+. ++.+|++..+...+.....+|..+ .+..|.+.||+|+|.++.++.+...+ ++..+....++
T Consensus 262 ~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~- 340 (490)
T PRK10642 262 TNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSN- 340 (490)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCC-
Confidence 345667778888885 467899988766666666666655 55689999999999988888764332 33322222111
Q ss_pred CCChhHHHHHHHHHhhccccchhhhhHHHHHHHhcCC-CCCceehhhHhhhhhhHHHHHHHHHHhcCCChH-HHHHHHHH
Q 007654 105 APVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPK-SRGPVVGILKGFAGLGGAILTQVYTMIHAPDHA-NLIFMVAV 182 (594)
Q Consensus 105 i~~~s~~~l~~~~~l~g~G~~~~~taal~t~~k~FP~-~RG~~~Gl~~a~~GLSa~i~s~i~~~~f~~~~~-~fll~la~ 182 (594)
+.+.+....++.+.+.+...........+.||. .||++.|+.-...-+++.+.+.+.....+...+ ....++..
T Consensus 341 ----~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~ 416 (490)
T PRK10642 341 ----VIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLM 416 (490)
T ss_pred ----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHH
Confidence 233333222322322222222223333467985 599988875544444444444333322221111 22222334
Q ss_pred HHHHHHHhhheeec
Q 007654 183 GPAMVVIALMFIIR 196 (594)
Q Consensus 183 ~~~~v~l~~~~~ir 196 (594)
.+.++.++..++++
T Consensus 417 ~~~~i~~~~~~~~p 430 (490)
T PRK10642 417 VVAVIGLITGVTMK 430 (490)
T ss_pred HHHHHHHHHHHHhc
Confidence 45566666666553
No 177
>PRK15011 sugar efflux transporter B; Provisional
Probab=97.96 E-value=0.00011 Score=79.26 Aligned_cols=158 Identities=12% Similarity=0.064 Sum_probs=85.2
Q ss_pred cccccccccH-HHHhhhCCChhhHHHHHHHHhhhhh-cccchhhhhchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCh
Q 007654 31 IGYLFGSISP-VIKSSLNYNQKQIARLGVAKDLGDS-VGFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVL 108 (594)
Q Consensus 31 t~Y~fS~ys~-~Lk~~lg~sq~~l~~i~~a~~~G~~-~gi~~G~l~D~~gp~~~l~iG~~~~~~Gy~~~~l~~~g~i~~~ 108 (594)
..+.|..+.| -+++++|+++.+...+.....+... ..++.|.+.||+++|....++.+...+.+..+ ...+
T Consensus 231 ~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~--~~~~----- 303 (393)
T PRK15011 231 TNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGM--LMAH----- 303 (393)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHH--HHHh-----
Confidence 3444555555 4677899999988875333333333 36789999999999887777665544443322 2222
Q ss_pred hHHHHHHHHHhhccccchhhhhHHHHHHHhcCCCCCceehhhHhhhhhhHHHHHHHHHHhcCCChHHHHHHHHHHHHHHH
Q 007654 109 PLWAMCILIFVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAILTQVYTMIHAPDHANLIFMVAVGPAMVV 188 (594)
Q Consensus 109 s~~~l~~~~~l~g~G~~~~~taal~t~~k~FP~~RG~~~Gl~~a~~GLSa~i~s~i~~~~f~~~~~~fll~la~~~~~v~ 188 (594)
+.+.+....++.+.+.+...........+.+|++||++.++.-....++..+-+.+.-.+.+...-...+.+.....+++
T Consensus 304 ~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~ 383 (393)
T PRK15011 304 SPAILLGLQLLNAIYIGILGGIGMLYFQDLMPGQAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIAT 383 (393)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 22332223333333333332333334456789999999999776666666555444432222111122333344444445
Q ss_pred Hhhheee
Q 007654 189 IALMFII 195 (594)
Q Consensus 189 l~~~~~i 195 (594)
++..+++
T Consensus 384 ~~~~~~~ 390 (393)
T PRK15011 384 LFCLLRI 390 (393)
T ss_pred HHHHHhh
Confidence 5444443
No 178
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=97.95 E-value=0.0001 Score=79.00 Aligned_cols=129 Identities=15% Similarity=0.059 Sum_probs=90.1
Q ss_pred cchHHHHHHhCCCcchh--HHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHh-ccCchhHHHH
Q 007654 382 DNLGQMSQSLGYDNTHI--FVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLG-MGWPGAMYVG 458 (594)
Q Consensus 382 ~n~~~i~~~~g~~~~~~--~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~-~~~~~~l~~~ 458 (594)
.-+..+.+++|.+..+. .+++.++...++.+++|.++||.+|+....|... . ...+.. .+... ..+...+++.
T Consensus 25 p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~-~-~~~~~~--~~~~~~~~~~~~l~i~ 100 (382)
T PRK11128 25 PFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLA-L-LTLLFA--VAFWFGAHSFWLLFVA 100 (382)
T ss_pred hhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHH-H-HHHHHH--HHHHHhcccHHHHHHH
Confidence 34566778888887643 8899999999999999999999988433222221 1 111111 11122 2334455667
Q ss_pred HHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHHhhh
Q 007654 459 TLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYDHEA 517 (594)
Q Consensus 459 ~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~~ 517 (594)
..+.|++.+...+...+++.++ .++.++.+|.......+|.. ++|.+.|.++|+.+
T Consensus 101 ~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~-igp~lgg~l~~~~g 156 (382)
T PRK11128 101 IGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFV-IGSALTGKLVSWFG 156 (382)
T ss_pred HHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHH-HHHHHHHHHHHHcC
Confidence 7778988888888877777776 46678888888877778766 59999999999875
No 179
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=97.95 E-value=8.2e-05 Score=79.81 Aligned_cols=147 Identities=14% Similarity=0.063 Sum_probs=97.2
Q ss_pred HHHHHHHHhhhcchhheecchHHHHHHhCCCcchh--HHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHHHHHH
Q 007654 364 WLIFFSLLLGSGSGLTVIDNLGQMSQSLGYDNTHI--FVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMA 441 (594)
Q Consensus 364 wll~~~~~~~~g~Gl~vi~n~~~i~~~~g~~~~~~--~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~ 441 (594)
|.+++.+++-..+--+++.-+..+.+++|.+..++ .+++..+...++-+++|.++||.+|+... +... .....+..
T Consensus 7 ~~l~~~~~~~~~~~~~~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~-~~~~-~~~~~l~~ 84 (382)
T TIGR00902 7 RWLALGFFGYFCAYGIFLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIA-LRLL-ALASAIFA 84 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHH-HHHH-HHHHHHHH
Confidence 33444444333322334445777888999987654 77888999999999999999998763221 1111 11111111
Q ss_pred HHHHHHh-ccCchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHHhhh
Q 007654 442 IGHIFLG-MGWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYDHEA 517 (594)
Q Consensus 442 ~~~ll~~-~~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~~ 517 (594)
+ ++.. ..+...+++..++.|..++....+.-+++.|+ .|+.++.||.+.....+|.. ++|.+.|.+.|..+
T Consensus 85 ~--~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~-~g~~l~g~l~~~~g 156 (382)
T TIGR00902 85 A--AFSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFI-IGSALFGGLIGMFD 156 (382)
T ss_pred H--HHHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHH-HHHHHHHHHHHHcC
Confidence 1 1111 23344566666677888888888877777664 57889999999988888887 59999999999865
No 180
>PRK09952 shikimate transporter; Provisional
Probab=97.89 E-value=0.00029 Score=77.23 Aligned_cols=103 Identities=19% Similarity=0.204 Sum_probs=74.9
Q ss_pred HhhhhhcccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHhccCc-h--------hHHHHHHHHHhhhhhccchhHH
Q 007654 405 IWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLGMGWP-G--------AMYVGTLLIGLGYGAHWAIVPA 475 (594)
Q Consensus 405 i~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~~~~~-~--------~l~~~~~liG~~~G~~~~l~p~ 475 (594)
++..+|.++.|+++||++||+.. .+...+..++.++....+. . .+.+.-.+.|++.|+++.....
T Consensus 75 ~~~~~g~~~~G~l~Dr~Grr~~l------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~ 148 (438)
T PRK09952 75 LFRPLGGVVFGHFGDRLGRKRML------MLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAAL 148 (438)
T ss_pred HHHhhHHHHHHHHHHhhccHHHH------HHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHH
Confidence 44667788899999999996532 3344445555444443322 1 3666778899999999999999
Q ss_pred HHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHH
Q 007654 476 AASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYD 514 (594)
Q Consensus 476 i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd 514 (594)
+++|.+..|+-|...+....+..+|.. +++.+.+.+..
T Consensus 149 ~~~e~~p~~~rg~~~~~~~~g~~~G~~-l~~~~~~~l~~ 186 (438)
T PRK09952 149 LAVESAPKNKKAFYSSGVQVGYGVGLL-LSTGLVSLISM 186 (438)
T ss_pred HHHHhCCCCCCcHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 999999999888888888888888776 46656555543
No 181
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=97.87 E-value=0.00018 Score=78.33 Aligned_cols=146 Identities=14% Similarity=0.085 Sum_probs=103.5
Q ss_pred HHHHHHHHHHhhhcchhheecchHH-HHHHhCCCcch--hHHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHHH
Q 007654 362 DFWLIFFSLLLGSGSGLTVIDNLGQ-MSQSLGYDNTH--IFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQF 438 (594)
Q Consensus 362 ~Fwll~~~~~~~~g~Gl~vi~n~~~-i~~~~g~~~~~--~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~ 438 (594)
.|+++...++ ..|....+++-+-+ +.++.+.+..+ ...+...++..++.+..|++.||++||+.. .+..+
T Consensus 4 ~~~~~~~~f~-~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~------~~g~~ 76 (410)
T TIGR00885 4 PFALITSLFA-LWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGI------LLGLF 76 (410)
T ss_pred HHHHHHHHHH-HHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHH------HHHHH
Confidence 4565554433 44544444433333 44457887654 377889999999999999999999985542 44455
Q ss_pred HHHHHHHHHhc----cCchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHH
Q 007654 439 VMAIGHIFLGM----GWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYD 514 (594)
Q Consensus 439 ~~~~~~ll~~~----~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd 514 (594)
+.+++.+++.. .+...+.+..++.|++.|.........+.+....++.++.-++......+|+. ++|.+.+.+..
T Consensus 77 l~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~-~g~~i~~~l~~ 155 (410)
T TIGR00885 77 LYALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSI-IGMVVAQQLIL 155 (410)
T ss_pred HHHHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHh
Confidence 55666554321 23345677888999999999998888888888777888888888888888887 58888888864
Q ss_pred h
Q 007654 515 H 515 (594)
Q Consensus 515 ~ 515 (594)
.
T Consensus 156 ~ 156 (410)
T TIGR00885 156 S 156 (410)
T ss_pred c
Confidence 3
No 182
>TIGR00898 2A0119 cation transport protein.
Probab=97.83 E-value=8e-05 Score=82.62 Aligned_cols=144 Identities=17% Similarity=0.216 Sum_probs=104.9
Q ss_pred HHHHHHhCCC---cc--hhHHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHhc-cCchhHHHH
Q 007654 385 GQMSQSLGYD---NT--HIFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLGM-GWPGAMYVG 458 (594)
Q Consensus 385 ~~i~~~~g~~---~~--~~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~~-~~~~~l~~~ 458 (594)
.+|.++.+.+ +. ....+++.++..+|.+++|.++||++||+. +.+..++..++.++... .+...+++.
T Consensus 113 ~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~------~~~~~~~~~i~~~~~~~~~~~~~~~~~ 186 (505)
T TIGR00898 113 STIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKV------LLLSTLVTAVSGVLTAFSPNYTVFLVF 186 (505)
T ss_pred ccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHH------HHHHHHHHHHHHHHHHHcccHHHHHHH
Confidence 3455566665 32 347899999999999999999999998543 23334444444443333 344567788
Q ss_pred HHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHHhhhhcccCcccccccccccccCCC
Q 007654 459 TLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYDHEAEKQHQPHHHLLNAGSIFTSMP 538 (594)
Q Consensus 459 ~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~~~~~~~~~~~~~~~~~~~~~~~ 538 (594)
-++.|++.|+.+.....+++|++..|+-+...++...+..+|.. +++.+++.+.
T Consensus 187 r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~-~~~~~~~~~~------------------------- 240 (505)
T TIGR00898 187 RLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLV-LLPLVAYFIP------------------------- 240 (505)
T ss_pred HHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHH-HHHHHHHHhh-------------------------
Confidence 88999999999999999999999999999888888888888776 4676554332
Q ss_pred CCCCCCccccCcccHHHHHHHHHHHHHHHHHHHH
Q 007654 539 RVDEPLKCEGSICYFLTSMIMSGLCIVAVILSMI 572 (594)
Q Consensus 539 ~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~~ 572 (594)
-+|..|.+.+..+++..+..++
T Consensus 241 ------------~wr~~~~~~~i~~~~~~~~~~~ 262 (505)
T TIGR00898 241 ------------DWRWLQLAVSLPTFLFFLLSWF 262 (505)
T ss_pred ------------HHHHHHHHHHHHHHHHHHHHHh
Confidence 1778888888777776665543
No 183
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=97.82 E-value=0.00023 Score=79.44 Aligned_cols=110 Identities=18% Similarity=0.258 Sum_probs=83.5
Q ss_pred hHHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHhc-cC------chhHHHHHHHHHhhhhhcc
Q 007654 398 IFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLGM-GW------PGAMYVGTLLIGLGYGAHW 470 (594)
Q Consensus 398 ~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~~-~~------~~~l~~~~~liG~~~G~~~ 470 (594)
...+...++..+|.+++|+++||++||+.. .+..++..++.++... .. ...+++.-++.|++.|+.+
T Consensus 60 ~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~------~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~ 133 (502)
T TIGR00887 60 AVNGSASIGTLAGQLFFGWLADKLGRKRVY------GMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDY 133 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccHHHH------HHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhh
Confidence 378889999999999999999999996543 2222333333322221 11 2357788889999999999
Q ss_pred chhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHH
Q 007654 471 AIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYD 514 (594)
Q Consensus 471 ~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd 514 (594)
...|.+++|+|..|+-|+..++......+|.. +++.+...+..
T Consensus 134 ~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~-~g~~~~~~~~~ 176 (502)
T TIGR00887 134 PLSAIITSEFATKKWRGAMMAAVFAMQGFGIL-AGAIVALIVLA 176 (502)
T ss_pred HHHHHHHHHhcChhhHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 99999999999999999999999988888886 47766655443
No 184
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=97.78 E-value=0.00027 Score=77.10 Aligned_cols=120 Identities=13% Similarity=0.066 Sum_probs=67.4
Q ss_pred cccccccccHH-HHhhhCCChhhHHHH-HHHHhhhhhcccchhhhhchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCh
Q 007654 31 IGYLFGSISPV-IKSSLNYNQKQIARL-GVAKDLGDSVGFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVL 108 (594)
Q Consensus 31 t~Y~fS~ys~~-Lk~~lg~sq~~l~~i-~~a~~~G~~~gi~~G~l~D~~gp~~~l~iG~~~~~~Gy~~~~l~~~g~i~~~ 108 (594)
..|.+..|-|+ +++++|+++++...+ ++....+...+++.|.+.||+++|.+..++.+...+....+...... .+.
T Consensus 258 ~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~-~~~- 335 (432)
T PRK10406 258 CFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQN-VSS- 335 (432)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHc-CCc-
Confidence 45666677666 567799999888774 44444444557788999999999877776665432222222111111 111
Q ss_pred hHHHHHHHHHhhccccchhhhhHHHHHHHhcCC-CCCceehhhHhh
Q 007654 109 PLWAMCILIFVGNNGETYFNTAALVSCVQNFPK-SRGPVVGILKGF 153 (594)
Q Consensus 109 s~~~l~~~~~l~g~G~~~~~taal~t~~k~FP~-~RG~~~Gl~~a~ 153 (594)
+++.+. +..++..+.++.....-....+.||. +||++.|+.-+.
T Consensus 336 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~ 380 (432)
T PRK10406 336 PYAAFG-LVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAV 380 (432)
T ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHH
Confidence 222221 22222222222222222335688985 699999998654
No 185
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=97.77 E-value=0.00013 Score=80.12 Aligned_cols=146 Identities=21% Similarity=0.380 Sum_probs=114.2
Q ss_pred hCCCcchh--HHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHhcc---CchhHHHHHHHHHhh
Q 007654 391 LGYDNTHI--FVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLGMG---WPGAMYVGTLLIGLG 465 (594)
Q Consensus 391 ~g~~~~~~--~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~~~---~~~~l~~~~~liG~~ 465 (594)
+|++.+++ .++.++-..-+--++.||++||+.-+++ .+++..+++.+|++++... .+..++++.++++++
T Consensus 56 Lg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~-----tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG 130 (498)
T COG3104 56 LGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRR-----TIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVG 130 (498)
T ss_pred CCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhH-----HHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhc
Confidence 66776543 7788888888889999999999844332 2366778888999887654 356899999999999
Q ss_pred hhhccchhHHHHHHhhccCchh--hhhhHHHhhhhHHHHHHHHHHHHHHHHhhhhcccCcccccccccccccCCCCCCCC
Q 007654 466 YGAHWAIVPAAASELFGLKKFG--ALYNFLTLANPAGSLVFSGLIASYIYDHEAEKQHQPHHHLLNAGSIFTSMPRVDEP 543 (594)
Q Consensus 466 ~G~~~~l~p~i~s~~FG~k~~g--~nyg~~~~a~~~g~~~~~~~l~G~iyd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 543 (594)
+|..=+-...+++|.+..++-- .-+++.|.+.-+|++ ++|.+.+++-+..
T Consensus 131 ~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl-~~p~i~~~~~~~~--------------------------- 182 (498)
T COG3104 131 TGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSL-IAPIITGLLAINY--------------------------- 182 (498)
T ss_pred cccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHH-HHHHHHHHHHHhh---------------------------
Confidence 9999999999999999977633 335566788889998 5999999888765
Q ss_pred CccccCcccHHHHHHHHHHHHHHHHHHHHHHhh
Q 007654 544 LKCEGSICYFLTSMIMSGLCIVAVILSMILVHR 576 (594)
Q Consensus 544 ~~C~G~~Cy~~~f~i~~~~~~~a~~ls~~l~~r 576 (594)
||...|-+++....++++.-+..+++
T Consensus 183 -------g~~~gF~~aavGm~~gl~~f~~~~r~ 208 (498)
T COG3104 183 -------GWHVGFGLAAVGMIIGLVIFLLGRRH 208 (498)
T ss_pred -------CHHHHHHHHHHHHHHHHHHHHHccch
Confidence 58999988888777777666665544
No 186
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=97.76 E-value=7.7e-05 Score=85.98 Aligned_cols=125 Identities=16% Similarity=0.186 Sum_probs=96.6
Q ss_pred HHHHHHhCCCcch--hHHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHhcc------------
Q 007654 385 GQMSQSLGYDNTH--IFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLGMG------------ 450 (594)
Q Consensus 385 ~~i~~~~g~~~~~--~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~~~------------ 450 (594)
.+|-+..+.++.+ ..+|.+.+++.++.+..|++.||.+|++-+ .+..++++++.++++..
T Consensus 57 ~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i------~~g~ll~~lg~ll~alphf~~~~y~~~~~ 130 (633)
T TIGR00805 57 TTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVI------GIGCAIMGLGSFLLSLPHFLSGRYSYSTT 130 (633)
T ss_pred hhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEE------EecHHHHHHHHHHHhChHHhcCCcccccc
Confidence 3444456777654 388999999999999999999999885543 33344444554443211
Q ss_pred ----------------------------------------CchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhh
Q 007654 451 ----------------------------------------WPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALY 490 (594)
Q Consensus 451 ----------------------------------------~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~ny 490 (594)
....++++=++.|++.|..+.+.+.++.|.+..++-+...
T Consensus 131 ~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~ 210 (633)
T TIGR00805 131 VSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYI 210 (633)
T ss_pred ccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHH
Confidence 0124667889999999999999999999999999999999
Q ss_pred hHHHhhhhHHHHHHHHHHHHHHHHhh
Q 007654 491 NFLTLANPAGSLVFSGLIASYIYDHE 516 (594)
Q Consensus 491 g~~~~a~~~g~~~~~~~l~G~iyd~~ 516 (594)
|++..+..+|.. +++.+.|.+.+..
T Consensus 211 ~i~~~~~~iG~~-lG~llgg~l~~~~ 235 (633)
T TIGR00805 211 GILESIAVFGPA-FGYLLGSFCLQIY 235 (633)
T ss_pred HHHHHHHHhhhH-HHHHHHHHHHhcc
Confidence 999999999887 5999999887654
No 187
>TIGR00901 2A0125 AmpG-related permease.
Probab=97.76 E-value=0.00046 Score=72.81 Aligned_cols=160 Identities=14% Similarity=0.056 Sum_probs=104.1
Q ss_pred hHHHHHHhCCCcchh-HHHHHHHhhhhhcccccchhhhhhh-ccCCchhHHHHHHHHHHHHHHHHHhcc----CchhHHH
Q 007654 384 LGQMSQSLGYDNTHI-FVSMISIWNFLGRVGGGYFSEIIVR-DYAYPRPVAMAVAQFVMAIGHIFLGMG----WPGAMYV 457 (594)
Q Consensus 384 ~~~i~~~~g~~~~~~-~Vsl~si~n~~GRl~~G~lsD~l~r-~~~~~r~~~l~~~~~~~~~~~ll~~~~----~~~~l~~ 457 (594)
+..+.++.|.+.++. ..+...+...+ ++++|.++||+.. +.+..|++. ....++.++..+.+... ....++.
T Consensus 11 ~~~~~~~~g~s~~~~g~~~~~~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l-~~~~~~~~~~~~~l~~~~~~~~l~~l~~ 88 (356)
T TIGR00901 11 LPYWLRSKNVSLKTIGFFSLVGLPYSL-KFLWSPLVDTVYLPFFGRRRSWL-VLTQVLLLSLLLILSFLVPSTDLPLLAG 88 (356)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHH-HHHHHHHHhcccCCCCCccHHHH-HHHHHHHHHHHHHHHcCCcchhHHHHHH
Confidence 445667889888754 33444444444 9999999999831 112123333 33333343333232222 1123444
Q ss_pred HHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHHhhhhcccCcccccccccccccCC
Q 007654 458 GTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYDHEAEKQHQPHHHLLNAGSIFTSM 537 (594)
Q Consensus 458 ~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~~~~~~~~~~~~~~~~~~~~~~ 537 (594)
...+.+++.+......-+++.|++..|+-+..-|+...+..+|.. +++.+.+.+++..+..+
T Consensus 89 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~-~~~~l~~~l~~~~g~~~----------------- 150 (356)
T TIGR00901 89 LAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGML-LSGSLALVLASPEFANT----------------- 150 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHH-HHHHHHHHHhhhccccc-----------------
Confidence 555667777777777788899999999999999999999999887 58889998887765211
Q ss_pred CCCCCCCccccCcccHHHHHHHHHHHHHHHHHHHH
Q 007654 538 PRVDEPLKCEGSICYFLTSMIMSGLCIVAVILSMI 572 (594)
Q Consensus 538 ~~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~~ 572 (594)
..+..+|..|.+.++..+++++..++
T Consensus 151 ---------~~~~~wr~~f~i~ai~~l~~~~~~~~ 176 (356)
T TIGR00901 151 ---------GLITLWGYIFFWTALLILPGLLVTLF 176 (356)
T ss_pred ---------ccccccHHHHHHHHHHHHHHHHHHHH
Confidence 12457999999998877776655544
No 188
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=97.70 E-value=0.00037 Score=73.25 Aligned_cols=102 Identities=22% Similarity=0.311 Sum_probs=75.1
Q ss_pred hhhhhcccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHhccCc---------hhHHHHHHHHHhhhhhccchhHHH
Q 007654 406 WNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLGMGWP---------GAMYVGTLLIGLGYGAHWAIVPAA 476 (594)
Q Consensus 406 ~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~~~~~---------~~l~~~~~liG~~~G~~~~l~p~i 476 (594)
...+|.+++|+++||++||+.. .+...+..++.++....+. ..+.+.-.+.|++.|..+...+.+
T Consensus 47 ~~~i~~~~~G~l~dr~g~r~~l------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~ 120 (394)
T TIGR00883 47 ARPLGAIVFGHFGDRIGRKKTL------VITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALY 120 (394)
T ss_pred HhhhHHHHhhhhhhhhhhHHHH------HHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHH
Confidence 3356889999999999985532 3444445555544433221 135667788899999999999999
Q ss_pred HHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHH
Q 007654 477 ASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYD 514 (594)
Q Consensus 477 ~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd 514 (594)
++|++-.|+-+...++...+..+|.. +++.+.+.+.+
T Consensus 121 ~~~~~~~~~r~~~~~~~~~~~~~G~~-i~~~~~~~~~~ 157 (394)
T TIGR00883 121 LAEYAPPGKRGFYGSFQQVGAPVGLL-LAALTVLLLSY 157 (394)
T ss_pred hhhcCCcccchHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 99999999999999998888888877 47777666554
No 189
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=97.68 E-value=0.00048 Score=74.34 Aligned_cols=158 Identities=16% Similarity=0.111 Sum_probs=105.2
Q ss_pred hhhcchhheecchHH-HHHHhCCCcchh-HHHHHHHhhhhhcccccchhhhh-----hhccCCchhHHHHHHHHHHHHHH
Q 007654 372 LGSGSGLTVIDNLGQ-MSQSLGYDNTHI-FVSMISIWNFLGRVGGGYFSEII-----VRDYAYPRPVAMAVAQFVMAIGH 444 (594)
Q Consensus 372 ~~~g~Gl~vi~n~~~-i~~~~g~~~~~~-~Vsl~si~n~~GRl~~G~lsD~l-----~r~~~~~r~~~l~~~~~~~~~~~ 444 (594)
+..|...+++...-| +.+++|++.+++ .++.+..- .+.+++||.++||+ +|||. |. .+...+++++.
T Consensus 9 ~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~-~~~~~l~g~~~Dr~~~~~~g~rr~----~l-~~~~~~~~l~~ 82 (402)
T PRK11902 9 FASGLPLALTSGTLQAWMTVEGLDIQTIGFFSLVGQA-YIFKFLWAPLMDRYTPPLLGRRRG----WL-LLTQVGLAASI 82 (402)
T ss_pred HHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH-HHHHHHHHHHHHcccccCCCcchh----HH-HHHHHHHHHHH
Confidence 344555555555544 557889998765 33444433 58889999999999 55333 23 33344444443
Q ss_pred HHHhcc-C---chhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHHhhhhcc
Q 007654 445 IFLGMG-W---PGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYDHEAEKQ 520 (594)
Q Consensus 445 ll~~~~-~---~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~~~~~ 520 (594)
..+... + ...+++..++.++..........+++.|++-.|+-++.-++...+..+|.. +++.+.+.+.+...
T Consensus 83 ~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i-~g~~l~~~l~~~~~--- 158 (402)
T PRK11902 83 AAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAML-VSGGLALWLADRVL--- 158 (402)
T ss_pred HHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHH-HHhHHHHHHHhccc---
Confidence 333222 1 223444545667777777788899999999888889988998888888877 47788888877431
Q ss_pred cCcccccccccccccCCCCCCCCCccccCcccHHHHHHHHHHHHHHHHH
Q 007654 521 HQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTSMIMSGLCIVAVIL 569 (594)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~l 569 (594)
-+|..|.+.+++.++..+.
T Consensus 159 ------------------------------gw~~~f~i~a~~~l~~~l~ 177 (402)
T PRK11902 159 ------------------------------GWGNTYLLMAGLMLAGALT 177 (402)
T ss_pred ------------------------------CHHHHHHHHHHHHHHHHHH
Confidence 2788999988877655443
No 190
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=97.66 E-value=0.00049 Score=73.77 Aligned_cols=149 Identities=12% Similarity=0.066 Sum_probs=91.7
Q ss_pred HHHHHHHHHHHHhcCcccccccccHHHHhhhCCChhhHHHH-HHHHhhhhhc-ccchhhhhchhhhHHHHHHHHHHHHHH
Q 007654 16 WLVFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKQIARL-GVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIG 93 (594)
Q Consensus 16 w~~l~a~~~i~l~~Gt~Y~fS~ys~~Lk~~lg~sq~~l~~i-~~a~~~G~~~-gi~~G~l~D~~gp~~~l~iG~~~~~~G 93 (594)
|..++...+.+...+..|.|. ++.++| .|++.+++..+ ++.+.++..+ .++.|++.||+|+|..+.++.+.....
T Consensus 211 ~~~~~~~~l~~~~~~~~~~~~--~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~ 287 (390)
T TIGR02718 211 WSLLALALLSAMTAVSGFGLS--KLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSL 287 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHh--hHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 556666666777777777753 455655 79999999986 4444445544 568999999999988877776654333
Q ss_pred HHHHHHHHhcCCCChhHHHHHHHHHhhccccchhhhhHHHHHHHhcC--CCCCceehhhHhhhhhhHHHHHHHHHHh
Q 007654 94 YGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP--KSRGPVVGILKGFAGLGGAILTQVYTMI 168 (594)
Q Consensus 94 y~~~~l~~~g~i~~~s~~~l~~~~~l~g~G~~~~~taal~t~~k~FP--~~RG~~~Gl~~a~~GLSa~i~s~i~~~~ 168 (594)
.. .+.........++.+.+.....+.+.+.+....+.....++..+ ++||+..++..+..+++..+-+.+.-..
T Consensus 288 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l 363 (390)
T TIGR02718 288 AL-LWFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYL 363 (390)
T ss_pred HH-HHHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22 23332222111123333333333444444444444555566664 4689999999999999887766655433
No 191
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=97.65 E-value=0.00028 Score=72.35 Aligned_cols=147 Identities=20% Similarity=0.257 Sum_probs=102.3
Q ss_pred cHHHHHHHHHHHhhhcchhheecchHHHHHH-hCCCcchh--HHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHH
Q 007654 360 KADFWLIFFSLLLGSGSGLTVIDNLGQMSQS-LGYDNTHI--FVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVA 436 (594)
Q Consensus 360 t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~~-~g~~~~~~--~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~ 436 (594)
.+.||+++++.++-.-+-.-.|.--....++ .|.++.++ ..|..-.-++.--.+.|.++||.|++- |+++-+
T Consensus 263 ~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~-----~wv~~a 337 (459)
T KOG4686|consen 263 YPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNL-----WWVASA 337 (459)
T ss_pred CccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhccee-----hhHHHH
Confidence 4789999998887655444444333333344 48876532 556666666777889999999999843 344666
Q ss_pred HHHHHHHHHHHhccCchhHHHHHHHHHhhhhh----ccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHH
Q 007654 437 QFVMAIGHIFLGMGWPGAMYVGTLLIGLGYGA----HWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYI 512 (594)
Q Consensus 437 ~~~~~~~~ll~~~~~~~~l~~~~~liG~~~G~----~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~i 512 (594)
.+....++..+.+... .-|.+..+.|++|-- .|.+.|.++.|. ..|+-||+++.---+|-. +.|.++|.+
T Consensus 338 ~~~tl~~H~~l~Ft~l-sPy~~m~~lGLsysllAcslWP~va~~vpE~----qLGTaygf~qsIqNLgla-~i~Iiag~i 411 (459)
T KOG4686|consen 338 CILTLLGHSGLFFTFL-SPYTSMTFLGLSYSLLACSLWPCVASLVPEE----QLGTAYGFIQSIQNLGLA-FIPIIAGFI 411 (459)
T ss_pred HHHHHHHhhhHHhhhc-cHHHHHHHHhhhHHHHHHHHhhhhhhhCCHH----HhcchHHHHHHHHhhhhh-HHhhhhhee
Confidence 6777777765544332 235677788998864 677788888775 788999998877767655 578999999
Q ss_pred HHhhh
Q 007654 513 YDHEA 517 (594)
Q Consensus 513 yd~~~ 517 (594)
.|+.+
T Consensus 412 ~d~~g 416 (459)
T KOG4686|consen 412 ADGDG 416 (459)
T ss_pred ecCCC
Confidence 99765
No 192
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=97.63 E-value=0.00026 Score=77.29 Aligned_cols=148 Identities=11% Similarity=0.114 Sum_probs=89.4
Q ss_pred HHHHHHHHHHHHhcCcccccccccHHHHhhhCCCh--------hhHHHHHHHHhhhh-hcccchhhhhchhhhHHHHHHH
Q 007654 16 WLVFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQ--------KQIARLGVAKDLGD-SVGFLAGSLCEVLPIWGALLVG 86 (594)
Q Consensus 16 w~~l~a~~~i~l~~Gt~Y~fS~ys~~Lk~~lg~sq--------~~l~~i~~a~~~G~-~~gi~~G~l~D~~gp~~~l~iG 86 (594)
|..++..++++......| .|.+...++.|+++ ++...+.....++. ...++.|.+.||+|+|.++.++
T Consensus 211 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~ 287 (418)
T TIGR00889 211 AIFFFFSMLLGAPLQITN---IFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLS 287 (418)
T ss_pred eeHHHHHHHHHhHHHHHH---HhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHH
Confidence 344555555544443333 44455455667665 33344322333333 3467899999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHhhccccchhhhhHHHHHHHhcC-CCCCceehhhH-hhhhhhHHHHHHH
Q 007654 87 ALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILK-GFAGLGGAILTQV 164 (594)
Q Consensus 87 ~~~~~~Gy~~~~l~~~g~i~~~s~~~l~~~~~l~g~G~~~~~taal~t~~k~FP-~~RG~~~Gl~~-a~~GLSa~i~s~i 164 (594)
.++..+++.++.. .... ...++.+.+..++.|.+.+..+.+...-..+++| ++||++.|+.- ...++++.+-+.+
T Consensus 288 ~~~~~v~~~l~~~--~~~~-~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l 364 (418)
T TIGR00889 288 LVAWALRFGFFAY--GDPE-YFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYIL 364 (418)
T ss_pred HHHHHHHHHHHHH--cCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 9887777654422 1111 1124444555556666666666666777788999 46999999995 5677777655555
Q ss_pred HHHhc
Q 007654 165 YTMIH 169 (594)
Q Consensus 165 ~~~~f 169 (594)
.-..+
T Consensus 365 ~G~l~ 369 (418)
T TIGR00889 365 SGVMV 369 (418)
T ss_pred HHHHH
Confidence 54333
No 193
>PRK15075 citrate-proton symporter; Provisional
Probab=97.61 E-value=0.0012 Score=72.23 Aligned_cols=119 Identities=14% Similarity=0.134 Sum_probs=67.5
Q ss_pred CcccccccccHHH-HhhhCCChhhHHHHHHHHhhhhhc-ccchhhhhchhhhHHHHHHHHHHHH-HHHHHHHHHHhcCCC
Q 007654 30 GIGYLFGSISPVI-KSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNF-IGYGWVWLIVTGRAP 106 (594)
Q Consensus 30 Gt~Y~fS~ys~~L-k~~lg~sq~~l~~i~~a~~~G~~~-gi~~G~l~D~~gp~~~l~iG~~~~~-~Gy~~~~l~~~g~i~ 106 (594)
...|....|.|.. ++.+|+++.+...+.....++..+ .+.+|++.||+|+|.+..++.+... .++..+...... +
T Consensus 252 ~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~--~ 329 (434)
T PRK15075 252 VSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAA--P 329 (434)
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcC--C
Confidence 3355566677774 556899998877766555555533 5678999999999888777654432 233221111111 1
Q ss_pred ChhHHHHHHHHHhhccccchhhhhHHHHHHHhcCC-CCCceehhhHh
Q 007654 107 VLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPK-SRGPVVGILKG 152 (594)
Q Consensus 107 ~~s~~~l~~~~~l~g~G~~~~~taal~t~~k~FP~-~RG~~~Gl~~a 152 (594)
+++.+....++.+.+.+...........+.+|+ .||++.|+.-+
T Consensus 330 --~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~ 374 (434)
T PRK15075 330 --SFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYS 374 (434)
T ss_pred --chHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHH
Confidence 222222212222223333333334455677885 59999998644
No 194
>PRK10133 L-fucose transporter; Provisional
Probab=97.55 E-value=0.001 Score=73.08 Aligned_cols=145 Identities=16% Similarity=0.133 Sum_probs=98.2
Q ss_pred HHHHHHHHHHHhhhcchhheecchHHHHHHhCCCcchh--HHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHHH
Q 007654 361 ADFWLIFFSLLLGSGSGLTVIDNLGQMSQSLGYDNTHI--FVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQF 438 (594)
Q Consensus 361 ~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~~~g~~~~~~--~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~ 438 (594)
..|++++++++.....=.....-..++-++++.++.+. .++.+.+...++-+..|.++||++||+.. .....
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l------~~g~~ 99 (438)
T PRK10133 26 IPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGI------ITGLF 99 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH------HHHHH
Confidence 36677776665544333333333444555678887543 77899999999999999999999996542 34444
Q ss_pred HHHHHHHHH---h-ccCchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhh-hhhHHHhhhhHHHHHHHHHHHHHHH
Q 007654 439 VMAIGHIFL---G-MGWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGA-LYNFLTLANPAGSLVFSGLIASYIY 513 (594)
Q Consensus 439 ~~~~~~ll~---~-~~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~-nyg~~~~a~~~g~~~~~~~l~G~iy 513 (594)
+..++.+++ . ..+...+.++-++.|++.|........++.|.. .++-+. .-++....+.+|.. ++|.+.+.+-
T Consensus 100 ~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~-~~~~~~~~~s~~~~~~~~G~~-~g~~~g~~l~ 177 (438)
T PRK10133 100 LYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLG-PESSGHFRLNLAQTFNSFGAI-IAVVFGQSLI 177 (438)
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhC-ChhhHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 455555443 2 233446777888899999999999999999864 455553 56677777777776 4776665543
No 195
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=97.54 E-value=0.00063 Score=60.21 Aligned_cols=97 Identities=19% Similarity=0.210 Sum_probs=72.9
Q ss_pred cccchhhhhchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHhhccccchhhhhHHHHHHHhcCC-CCC
Q 007654 66 VGFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPK-SRG 144 (594)
Q Consensus 66 ~gi~~G~l~D~~gp~~~l~iG~~~~~~Gy~~~~l~~~g~i~~~s~~~l~~~~~l~g~G~~~~~taal~t~~k~FP~-~RG 144 (594)
.+++.|.+.||+|+|..+.++.....++....... .++|.+....++.|.+.+..++.......+.+|+ +||
T Consensus 14 ~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 86 (141)
T TIGR00880 14 YSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALS-------SNITVLIIARFLQGFGAAFALVAGAALIADIYPPEERG 86 (141)
T ss_pred HHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHh-------ccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChhhhh
Confidence 36788999999999999988888877776654322 1356656566666777777777777777888984 699
Q ss_pred ceehhhHhhhhhhHHHHHHHHHHhc
Q 007654 145 PVVGILKGFAGLGGAILTQVYTMIH 169 (594)
Q Consensus 145 ~~~Gl~~a~~GLSa~i~s~i~~~~f 169 (594)
++.|+......++..+-..+.....
T Consensus 87 ~~~~~~~~~~~~g~~~~~~~~~~~~ 111 (141)
T TIGR00880 87 VALGLMSAGIALGPLLGPPLGGVLA 111 (141)
T ss_pred HHHHHHHHhHHHHHHHhHHhHHHHh
Confidence 9999999888888877766665554
No 196
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=97.53 E-value=0.094 Score=56.85 Aligned_cols=155 Identities=17% Similarity=0.158 Sum_probs=97.3
Q ss_pred CCCcc--hhHHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHh--ccCchhHHHHHHHHHhhhh
Q 007654 392 GYDNT--HIFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLG--MGWPGAMYVGTLLIGLGYG 467 (594)
Q Consensus 392 g~~~~--~~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~--~~~~~~l~~~~~liG~~~G 467 (594)
|++.. +..-++.+.+-.+|=+..|++..+- ....|...+-......+...+++. ..++..+..+..++|++.|
T Consensus 240 gmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~---~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~G 316 (403)
T PF03209_consen 240 GMSVGETTRLTAFWGGGTLLGMLLAGFLLSRR---LGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLGNG 316 (403)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhh
Confidence 55543 3367788888888888888876532 222222222222222222222222 2345678899999999999
Q ss_pred hccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHHhhhhcccCcccccccccccccCCCCCCCCCccc
Q 007654 468 AHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYDHEAEKQHQPHHHLLNAGSIFTSMPRVDEPLKCE 547 (594)
Q Consensus 468 ~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~ 547 (594)
....-.=+..-|.=...+-|.--|....+.+++-. ++..+.|.+.|-...-.. .. +
T Consensus 317 ~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~G-lg~~~GG~~~D~~~~~~~--------------~~--~------- 372 (403)
T PF03209_consen 317 LFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARG-LGTFLGGALRDLVRALFG--------------NS--P------- 372 (403)
T ss_pred HHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcc--------------CC--c-------
Confidence 88777777788888778888777777777777665 588899999997642110 00 0
Q ss_pred cCcccHHHHHHHHHHHHHHHHHHHHHH
Q 007654 548 GSICYFLTSMIMSGLCIVAVILSMILV 574 (594)
Q Consensus 548 G~~Cy~~~f~i~~~~~~~a~~ls~~l~ 574 (594)
.--|...|.+=+.+.++++++..-+.
T Consensus 373 -~~aY~~VF~lEa~ll~~a~~ll~~l~ 398 (403)
T PF03209_consen 373 -ALAYGVVFALEAVLLLAALVLLGRLD 398 (403)
T ss_pred -chHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 12588888877776655555444333
No 197
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=97.46 E-value=0.002 Score=71.22 Aligned_cols=156 Identities=10% Similarity=0.105 Sum_probs=120.8
Q ss_pred HHHHHhCCCcch---hHHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHhc-cCchhHHHHHHH
Q 007654 386 QMSQSLGYDNTH---IFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLGM-GWPGAMYVGTLL 461 (594)
Q Consensus 386 ~i~~~~g~~~~~---~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~~-~~~~~l~~~~~l 461 (594)
+|.+++|++.++ ...+.+...-.+..+.+|+++||++-|+.+ .+..+.-.+..+++.. .....+.+.=++
T Consensus 51 ~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL------~l~~l~Wsl~t~L~~fa~Sl~~L~i~R~l 124 (511)
T TIGR00806 51 YLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVL------VLQALSFVCVWLLLLLGTSVWHMQLMEVF 124 (511)
T ss_pred HHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455678888776 378999999999999999999999774432 2222222222223222 234467888889
Q ss_pred HHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHHhhhhcccCcccccccccccccCCCCCC
Q 007654 462 IGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYDHEAEKQHQPHHHLLNAGSIFTSMPRVD 541 (594)
Q Consensus 462 iG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (594)
.|++.|..+ .+-..++.+|-.|++++-.++.-.+..+|..+ ++.+.+.+ ...
T Consensus 125 lGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~I-a~~L~qll-~s~------------------------- 176 (511)
T TIGR00806 125 YSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFL-SSVLGQLL-VTL------------------------- 176 (511)
T ss_pred HHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH-Hhc-------------------------
Confidence 999999999 99999999999999999999999999999984 77777773 222
Q ss_pred CCCccccCcccHHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 007654 542 EPLKCEGSICYFLTSMIMSGLCIVAVILSMILVHRTTNVY 581 (594)
Q Consensus 542 ~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~~l~~r~r~~~ 581 (594)
|.+-|+.-.+|+.+...+++++++++-...|+.|
T Consensus 177 ------gWr~y~~Ln~Isl~s~~~a~~~a~~LP~~~~sl~ 210 (511)
T TIGR00806 177 ------GWISYSTLNIISLVFMTFSVFLALFLKRPKRSLF 210 (511)
T ss_pred ------CchhHHHHHHHHHHHHHHHHHHHHhCCCCchhhh
Confidence 2346999999999999999999999987777654
No 198
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=97.45 E-value=0.0022 Score=71.49 Aligned_cols=168 Identities=15% Similarity=0.105 Sum_probs=106.8
Q ss_pred ecchHHHHHHhCCCcchh--HHHHHHHhhhhhcccccchhhh----hhhccCCchhHHHHHHHHHHHHHHHHHhccCc--
Q 007654 381 IDNLGQMSQSLGYDNTHI--FVSMISIWNFLGRVGGGYFSEI----IVRDYAYPRPVAMAVAQFVMAIGHIFLGMGWP-- 452 (594)
Q Consensus 381 i~n~~~i~~~~g~~~~~~--~Vsl~si~n~~GRl~~G~lsD~----l~r~~~~~r~~~l~~~~~~~~~~~ll~~~~~~-- 452 (594)
..++.++.+.+|.+.... ...+-.+...+..+++|++||| +|||+ ++.+. ......++.+++.....
T Consensus 24 ~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRr----p~il~-g~~~~~~~l~ll~~~~~~~ 98 (477)
T TIGR01301 24 LSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRR----PFIAA-GAALVAFAVILIGFAADIG 98 (477)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChH----HHHHH-HHHHHHHHHHHHHhCchhh
Confidence 467888888999987533 6678888999999999999996 66643 33322 22223333333322110
Q ss_pred ----------------hhHHHHHHHHHhhhhhccchhHHHHHHhhccCch--hhhhhHHHhhhhHHHHHHHHHHHHHH--
Q 007654 453 ----------------GAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKF--GALYNFLTLANPAGSLVFSGLIASYI-- 512 (594)
Q Consensus 453 ----------------~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~--g~nyg~~~~a~~~g~~~~~~~l~G~i-- 512 (594)
..+.++..+..++......-+.++++|.+..++- +.-+++......+|+. +++.+.|..
T Consensus 99 ~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~i-lg~~~g~~~~~ 177 (477)
T TIGR01301 99 HLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNV-LGYAAGAYSGL 177 (477)
T ss_pred hhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhH
Confidence 1223333445567777888889999999987753 5678888888888887 477666643
Q ss_pred HHhhhhcccCcccccccccccccCCCCCCCCCccccCcccHHHHHHHHHHHHHHHHHHHHHHh
Q 007654 513 YDHEAEKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTSMIMSGLCIVAVILSMILVH 575 (594)
Q Consensus 513 yd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~~l~~ 575 (594)
++..+.. .++..+.-..-++..|++.+++.++.++++++..+
T Consensus 178 ~~~~~~~---------------------~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~ 219 (477)
T TIGR01301 178 YKIFPFT---------------------KTEACGVSCANLKSCFLIDIILLAILTYIALSAVK 219 (477)
T ss_pred HHhcccc---------------------cccccccccchHHHHHHHHHHHHHHHHHHHeeeee
Confidence 2222210 01112233446899999998888887777776443
No 199
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=97.39 E-value=0.03 Score=62.00 Aligned_cols=158 Identities=14% Similarity=0.186 Sum_probs=89.6
Q ss_pred HHHHhhcHHHHHHHHHHHhhhcchhheecchHHHHHHhCCCcchh---HHHHHHHhhhh-hcccccchhhhhhhccCCch
Q 007654 354 LTQALIKADFWLIFFSLLLGSGSGLTVIDNLGQMSQSLGYDNTHI---FVSMISIWNFL-GRVGGGYFSEIIVRDYAYPR 429 (594)
Q Consensus 354 ~~e~l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~~~g~~~~~~---~Vsl~si~n~~-GRl~~G~lsD~l~r~~~~~r 429 (594)
....+|++.|-++.++..+. ..+.-+.+..-.-......+..+. .+...+.++.+ +-+++-.+++|+++|+.+
T Consensus 229 ~~~~~~Nrp~~~~l~~~l~~-~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~-- 305 (467)
T COG2211 229 FLLIFKNRPLLLLLLMNLLL-FIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLF-- 305 (467)
T ss_pred HHHHHccchHHHHHHHHHHH-HHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHH--
Confidence 34567888877777744443 222111111111111222232222 33443444444 478888899888885532
Q ss_pred hHHHHHHHHHHHHHHHHHhcc---CchhHHHHHHHHHhhhhhccchhHHHHHHh-------hccCchhhhhhHHHhhhhH
Q 007654 430 PVAMAVAQFVMAIGHIFLGMG---WPGAMYVGTLLIGLGYGAHWAIVPAAASEL-------FGLKKFGALYNFLTLANPA 499 (594)
Q Consensus 430 ~~~l~~~~~~~~~~~ll~~~~---~~~~l~~~~~liG~~~G~~~~l~p~i~s~~-------FG~k~~g~nyg~~~~a~~~ 499 (594)
....++.+++.+++... ....+++..++.+++.+....+..++++|. =|.|.=|..|+.+...-=+
T Consensus 306 ----~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~ 381 (467)
T COG2211 306 ----LIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKL 381 (467)
T ss_pred ----HHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHH
Confidence 33455555555443322 233455555777888888888888888875 3667788889988755445
Q ss_pred HHHHHHHHHHHHHHHhhhhc
Q 007654 500 GSLVFSGLIASYIYDHEAEK 519 (594)
Q Consensus 500 g~~~~~~~l~G~iyd~~~~~ 519 (594)
|.. ++..+.|.+-+.-|-.
T Consensus 382 g~a-la~~~~g~~L~~~Gyv 400 (467)
T COG2211 382 GLA-LAGFIPGWILGAIGYV 400 (467)
T ss_pred HHH-HHHHHHHHHHHHcCCC
Confidence 554 3556677777766644
No 200
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=97.34 E-value=0.0031 Score=68.21 Aligned_cols=147 Identities=18% Similarity=0.208 Sum_probs=110.7
Q ss_pred hHHHHHHhCCCcchh--HHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHhccC-chhHHHHHH
Q 007654 384 LGQMSQSLGYDNTHI--FVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLGMGW-PGAMYVGTL 460 (594)
Q Consensus 384 ~~~i~~~~g~~~~~~--~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~~~~-~~~l~~~~~ 460 (594)
...|.++.|++.++. +-|.++|.=.++..++|.+|||-..|+-. .+.+++.++..+++...+ ...+.+.-.
T Consensus 52 ~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm------~~gLilsai~nil~Gfs~s~~~~~~l~~ 125 (448)
T COG2271 52 MPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFM------AFGLILSAIVNILFGFSPSLFLFAVLWV 125 (448)
T ss_pred cHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceee------hHHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 344666677887765 78999999999999999999988665533 444555555554554433 234555666
Q ss_pred HHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHH--HHHHHhhhhcccCcccccccccccccCCC
Q 007654 461 LIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIA--SYIYDHEAEKQHQPHHHLLNAGSIFTSMP 538 (594)
Q Consensus 461 liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~--G~iyd~~~~~~~~~~~~~~~~~~~~~~~~ 538 (594)
+=|+-.|..|.-.--++..+|..|.=|+.+++--++--+|+.+ -|.+. +.+.++.
T Consensus 126 lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal-~~~~~~la~~~~~~---------------------- 182 (448)
T COG2271 126 LNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGAL-APLVALLAFFAFHG---------------------- 182 (448)
T ss_pred HHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccch-HHHHHHHHHHHhcc----------------------
Confidence 7789999999999999999999999999999999999999886 56677 7777655
Q ss_pred CCCCCCccccCcccHHHHHHHHHHHHHHHHHHH
Q 007654 539 RVDEPLKCEGSICYFLTSMIMSGLCIVAVILSM 571 (594)
Q Consensus 539 ~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~ 571 (594)
..|.+|++-++++++-.+..+
T Consensus 183 ------------~w~~~f~~pgiiaiival~~~ 203 (448)
T COG2271 183 ------------GWRAAFYFPGIIAIIVALILL 203 (448)
T ss_pred ------------chhHHHHHHHHHHHHHHHHHH
Confidence 389999999887654433333
No 201
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.28 E-value=0.00068 Score=72.63 Aligned_cols=140 Identities=16% Similarity=0.184 Sum_probs=116.9
Q ss_pred HHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHhccC-chhHHHHHHHHHhhhhhccchhHHHH
Q 007654 399 FVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLGMGW-PGAMYVGTLLIGLGYGAHWAIVPAAA 477 (594)
Q Consensus 399 ~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~~~~-~~~l~~~~~liG~~~G~~~~l~p~i~ 477 (594)
..+..++.+.+--.+.|.+.||+++ ++| +++...++..+-+++++++ ...++++=.+=|++....+..-=+++
T Consensus 111 LFaskA~~qllvnp~~G~l~~~iGy--~ip----m~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsglaml 184 (464)
T KOG3764|consen 111 LFASKALVQLLVNPFFGNLIDRIGY--KIP----MVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSGLAML 184 (464)
T ss_pred HHHHHHHHHHHhcccchhhHHHhcc--ccH----HHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhhHHHH
Confidence 6677888888889999999999987 333 3455556666666777655 45788888999999999999999999
Q ss_pred HHhhccCch-hhhhhHHHhhhhHHHHHHHHHHHHHHHHhhhhcccCcccccccccccccCCCCCCCCCccccCcccHHHH
Q 007654 478 SELFGLKKF-GALYNFLTLANPAGSLVFSGLIASYIYDHEAEKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTS 556 (594)
Q Consensus 478 s~~FG~k~~-g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f 556 (594)
+|.|..+|= |+--|+......+|-. ++|...|.+||.-| |+.+|
T Consensus 185 Ad~f~~d~er~~vmGialgfislG~l-vgPpfGGilYe~~G----------------------------------k~aPF 229 (464)
T KOG3764|consen 185 ADVFPEDNERGSVMGIALGFISLGVL-VGPPFGGILYEFAG----------------------------------KSAPF 229 (464)
T ss_pred HHHcccchhhhHHHHHHHHHHhccce-ecCCcccchHhhcC----------------------------------CcCcH
Confidence 999986654 9999999999999887 59999999999876 78899
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhh
Q 007654 557 MIMSGLCIVAVILSMILVHRTTN 579 (594)
Q Consensus 557 ~i~~~~~~~a~~ls~~l~~r~r~ 579 (594)
+|.++++++...+-+.+...+|.
T Consensus 230 lVL~~v~Lld~~L~l~vi~p~~~ 252 (464)
T KOG3764|consen 230 LVLAIVLLLDGALQLLVIEPTEM 252 (464)
T ss_pred HHHHHHHHHHHHHHHheeCcccc
Confidence 99999999999999998887664
No 202
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=97.26 E-value=0.0024 Score=72.07 Aligned_cols=147 Identities=16% Similarity=0.200 Sum_probs=101.5
Q ss_pred HHHhhcHHHHHHHHHHHhhhcchhheecchHHHHHHhC-------CCcchhHHHHHHHhhh----hhcccccchhhhhhh
Q 007654 355 TQALIKADFWLIFFSLLLGSGSGLTVIDNLGQMSQSLG-------YDNTHIFVSMISIWNF----LGRVGGGYFSEIIVR 423 (594)
Q Consensus 355 ~e~l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~~~g-------~~~~~~~Vsl~si~n~----~GRl~~G~lsD~l~r 423 (594)
+.-+|+++|..+|+.-.+ +|++...+..+ .+.+...|++...+.. +--+..|.+.||+.|
T Consensus 4 ~aplr~~~Fr~lw~a~~i---------S~lG~~~~~va~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~dr 74 (524)
T PF05977_consen 4 FAPLRNRNFRRLWIAQLI---------SNLGDWMQTVALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDR 74 (524)
T ss_pred cccccCchHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 456899999999998775 45555444332 2233446666555544 445678999999987
Q ss_pred ccCCchhHHHHHHHHHHHHHHH---HH-h--ccCchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhh
Q 007654 424 DYAYPRPVAMAVAQFVMAIGHI---FL-G--MGWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLAN 497 (594)
Q Consensus 424 ~~~~~r~~~l~~~~~~~~~~~l---l~-~--~~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~ 497 (594)
|+-. ....++.++..+ ++ . ..++..+++.++++|++........-+++.|....++..+-.++..+..
T Consensus 75 rril------i~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~ 148 (524)
T PF05977_consen 75 RRIL------ILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISF 148 (524)
T ss_pred hHHH------HHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHH
Confidence 5532 333333222211 11 1 2345568888999999999999999999999999889888888887777
Q ss_pred hHHHHHHHHHHHHHHHHhhh
Q 007654 498 PAGSLVFSGLIASYIYDHEA 517 (594)
Q Consensus 498 ~~g~~~~~~~l~G~iyd~~~ 517 (594)
-++-. +||.++|.++...|
T Consensus 149 niar~-iGPalgG~Lva~~G 167 (524)
T PF05977_consen 149 NIARI-IGPALGGILVAFFG 167 (524)
T ss_pred HHHHh-ccchHHHHHHHHHH
Confidence 77666 59999999998776
No 203
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=97.23 E-value=0.0014 Score=71.58 Aligned_cols=129 Identities=16% Similarity=0.151 Sum_probs=91.8
Q ss_pred hhHHHHHHHHHHHHhcCc-ccccccccHHHHhhhCCChhhHHHHHHH-HhhhhhcccchhhhhchhhhHHHHHHHHHHHH
Q 007654 14 NRWLVFVAAMWIQSCAGI-GYLFGSISPVIKSSLNYNQKQIARLGVA-KDLGDSVGFLAGSLCEVLPIWGALLVGALQNF 91 (594)
Q Consensus 14 ~Rw~~l~a~~~i~l~~Gt-~Y~fS~ys~~Lk~~lg~sq~~l~~i~~a-~~~G~~~gi~~G~l~D~~gp~~~l~iG~~~~~ 91 (594)
+.|+.++.-.++++..=. -|+=.-=-+.+++.+|++.++.-++++. ..+.+..+++.|++.|||-++.++.+|.....
T Consensus 30 ~~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~ 109 (493)
T KOG1330|consen 30 SPTLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWT 109 (493)
T ss_pred cchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHH
Confidence 345555555555543211 1222223467888999999999998544 44455679999999999999998888888765
Q ss_pred HHHHHHHHHHhcCCCChhHHHHHHHHHhhccccchhhhhHHHHHHHhcC-CCCCceehh
Q 007654 92 IGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGI 149 (594)
Q Consensus 92 ~Gy~~~~l~~~g~i~~~s~~~l~~~~~l~g~G~~~~~taal~t~~k~FP-~~RG~~~Gl 149 (594)
..-... +.+ ..+|++.++=.+.|.|-....+.+-.--..+|| ++|+++-|+
T Consensus 110 ~Av~~~-----~fs--~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~i 161 (493)
T KOG1330|consen 110 LAVFAS-----GFS--NHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGI 161 (493)
T ss_pred HHHHHH-----HHH--HHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHH
Confidence 444432 322 258998888888889999888888888889999 479987655
No 204
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=97.19 E-value=0.0025 Score=71.37 Aligned_cols=128 Identities=16% Similarity=0.048 Sum_probs=96.2
Q ss_pred hHHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHhc-cCchhHHHHHHHHHhhhhhccchhHHH
Q 007654 398 IFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLGM-GWPGAMYVGTLLIGLGYGAHWAIVPAA 476 (594)
Q Consensus 398 ~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~~-~~~~~l~~~~~liG~~~G~~~~l~p~i 476 (594)
...+++-++..+|-+++|.+||++|||.. +.+..++..++.+..+. .+...+.+.=.+.|++.++.+.+...+
T Consensus 122 ~~~s~~~~G~~vG~~i~g~lsD~~GRk~~------~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~~~~~~ 195 (521)
T KOG0255|consen 122 LGQSLFFLGVLVGSLIFGPLSDRFGRKPV------LLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLTVGFGL 195 (521)
T ss_pred HHHHHHHHHHHHHHhhheehHhhcccHHH------HHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhHHhHhh
Confidence 36788999999999999999999999543 24444444444444443 445578889999999999999999999
Q ss_pred HHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHHhhhhcccCcccccccccccccCCCCCCCCCccccCcccHHHH
Q 007654 477 ASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYDHEAEKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTS 556 (594)
Q Consensus 477 ~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f 556 (594)
++|+++.|+=+..-.+ ...+..++. +.+.+.+++.. -+|..+
T Consensus 196 ~~E~~~~~~R~~~~~~-~~~~~~~~~-~~~~~~a~~~~------------------------------------~Wr~~~ 237 (521)
T KOG0255|consen 196 VAEIVSPKQRGLALTL-GGFFFVGGL-MLPAGAAYITR------------------------------------DWRWLF 237 (521)
T ss_pred heeecCcchhhHHHHH-HHHHHHHHH-HHHHHHHHHHh------------------------------------hHHHHH
Confidence 9999999997776666 444445555 36777777765 288888
Q ss_pred HHHHHHHHHHHHH
Q 007654 557 MIMSGLCIVAVIL 569 (594)
Q Consensus 557 ~i~~~~~~~a~~l 569 (594)
.+....+++.+++
T Consensus 238 ~~~~~~~~~~~~~ 250 (521)
T KOG0255|consen 238 WIISIPSGLFLLL 250 (521)
T ss_pred HHHHHHHHHHHHH
Confidence 8888877777666
No 205
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.08 E-value=0.0019 Score=72.19 Aligned_cols=142 Identities=15% Similarity=0.205 Sum_probs=105.7
Q ss_pred hHHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHhhhhhccchhHHHH
Q 007654 398 IFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLGMGWPGAMYVGTLLIGLGYGAHWAIVPAAA 477 (594)
Q Consensus 398 ~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~~~~~~~l~~~~~liG~~~G~~~~l~p~i~ 477 (594)
...+++.++-.+|.+.+|.+.||+.- ++ ........-.+++.+-....+...+...=++.|+.-++.|...-+++
T Consensus 85 ~~~t~F~v~Yii~~~p~~~L~~r~~l----s~-~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~l 159 (495)
T KOG2533|consen 85 VLDTVFYVGYIIGQFPSGLLGDRFPL----SK-GLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAIL 159 (495)
T ss_pred hHHHHHHHHHHHHHhhHHHHHHhCCh----HH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHH
Confidence 47899999999999999999998842 11 11121112122221112234445566677889999999999999999
Q ss_pred HHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHHhhhhcccCcccccccccccccCCCCCCCCCccccCcccHHHHH
Q 007654 478 SELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYDHEAEKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTSM 557 (594)
Q Consensus 478 s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f~ 557 (594)
+.+|+.++.|...|+.+....+|++ ++.+++..++..++.. +...||..|+
T Consensus 160 g~wy~~~e~g~r~~~~~a~~~~g~i-~ggliA~g~~~~~~~~----------------------------~~~gW~~~Fi 210 (495)
T KOG2533|consen 160 GNWYGKSERGLRMGIWYASASLGNI-FGGLIAYGVFKLNGSG----------------------------GLAGWRWLFI 210 (495)
T ss_pred HhhcChhhhhhhHHHHHHhcchhhH-HHHHHHHHhhhhcCCC----------------------------CcCCceeehh
Confidence 9999999999999999999999998 6888988888755421 2247999999
Q ss_pred HHHHHHHHHHHHHHHH
Q 007654 558 IMSGLCIVAVILSMIL 573 (594)
Q Consensus 558 i~~~~~~~a~~ls~~l 573 (594)
|.++++++.-+++++.
T Consensus 211 I~G~i~~~~gi~~f~~ 226 (495)
T KOG2533|consen 211 IEGVITLVLGIVVFFF 226 (495)
T ss_pred HHHHHHHHHHheEEEE
Confidence 9998887766655543
No 206
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=97.01 E-value=0.0062 Score=65.92 Aligned_cols=154 Identities=14% Similarity=0.153 Sum_probs=89.6
Q ss_pred HhCCCcch--hHHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHh-ccC---c---hhHHHHHH
Q 007654 390 SLGYDNTH--IFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLG-MGW---P---GAMYVGTL 460 (594)
Q Consensus 390 ~~g~~~~~--~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~-~~~---~---~~l~~~~~ 460 (594)
.+|.++.. ...++..++.++..++.|+++||.++|++-.|++.+... ....++.+++. ..+ . ..+.+..+
T Consensus 29 ~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (437)
T TIGR00792 29 VLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGA-IPFSIVLVLLFTTPDFSATGKLVYAYITYI 107 (437)
T ss_pred ccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhH-HHHHHHHHHHHhCCCCCcchHHHHHHHHHH
Confidence 46777654 378889999999999999999998766555566664433 33333333322 221 1 12333445
Q ss_pred HHHhhhhhccchhHHHHHHhhc-cCchhhhhhHHHhhhhHHHHHHHHHHHHHHHHhhhhcccCcccccccccccccCCCC
Q 007654 461 LIGLGYGAHWAIVPAAASELFG-LKKFGALYNFLTLANPAGSLVFSGLIASYIYDHEAEKQHQPHHHLLNAGSIFTSMPR 539 (594)
Q Consensus 461 liG~~~G~~~~l~p~i~s~~FG-~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (594)
+.+++++....-+-++..|... .++-++..++-..+..+|+.+ .+.+.+.+....+...
T Consensus 108 ~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l-~~~~~~~l~~~~~~~~------------------- 167 (437)
T TIGR00792 108 LLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLL-VAVIVLPLVSYFGGGD------------------- 167 (437)
T ss_pred HHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCCc-------------------
Confidence 5677776544444455566542 345556666655555566553 4445555554332100
Q ss_pred CCCCCccccCcccHHHHHHHHHHHHHHHHHHHH
Q 007654 540 VDEPLKCEGSICYFLTSMIMSGLCIVAVILSMI 572 (594)
Q Consensus 540 ~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~~ 572 (594)
....|+..|.+.++++++..+++.+
T Consensus 168 --------~~~g~~~~~~i~~~l~~~~~~~~~~ 192 (437)
T TIGR00792 168 --------DKFGWFMFALVLALIGVVSLIICFF 192 (437)
T ss_pred --------ccccHHHHHHHHHHHHHHHHHHHHc
Confidence 0125888888888877766555543
No 207
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=96.95 E-value=0.0091 Score=69.13 Aligned_cols=152 Identities=24% Similarity=0.353 Sum_probs=108.4
Q ss_pred HhCCCcc--hhHHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHhccC---------chhHHHH
Q 007654 390 SLGYDNT--HIFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLGMGW---------PGAMYVG 458 (594)
Q Consensus 390 ~~g~~~~--~~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~~~~---------~~~l~~~ 458 (594)
.+|.+.+ ...+..+.-...+-.++.|++.|+.-.++. .+.+..++..+|+.++.... ...++++
T Consensus 17 ~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~-----tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~g 91 (654)
T TIGR00926 17 FLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFK-----TILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLG 91 (654)
T ss_pred HcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHH-----HHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHH
Confidence 3566543 235666777777778889999998755332 23455566667776554321 1236778
Q ss_pred HHHHHhhhhhccchhHHHHHHhhccC---chhhhhhHHHhhhhHHHHHHHHHHHHHHHHhhhhcccCccccccccccccc
Q 007654 459 TLLIGLGYGAHWAIVPAAASELFGLK---KFGALYNFLTLANPAGSLVFSGLIASYIYDHEAEKQHQPHHHLLNAGSIFT 535 (594)
Q Consensus 459 ~~liG~~~G~~~~l~p~i~s~~FG~k---~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~~~~~~~~~~~~~~~~~~~~ 535 (594)
.+++.++.|+.=+.+.++..|.|..+ .+-.-|.+.+.+.-+|+. +++.+.+++.+..
T Consensus 92 LaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSl-is~~i~~~l~~~~------------------- 151 (654)
T TIGR00926 92 LALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSL-ISTIITPILRGDV------------------- 151 (654)
T ss_pred HHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhh-------------------
Confidence 99999999999999999999999754 367788888888889988 4777887776533
Q ss_pred CCCCCCCCCcccc-CcccHHHHHHHHHHHHHHHHHHHHHHh
Q 007654 536 SMPRVDEPLKCEG-SICYFLTSMIMSGLCIVAVILSMILVH 575 (594)
Q Consensus 536 ~~~~~~~~~~C~G-~~Cy~~~f~i~~~~~~~a~~ls~~l~~ 575 (594)
.|.| ..||..+|.+.+++.++++++-+.-.+
T Consensus 152 ---------~~fg~~~~~~~aF~i~~i~m~ia~lvf~~g~k 183 (654)
T TIGR00926 152 ---------GCFGCQDCYPLAFGVPAILMILALIVFMAGSK 183 (654)
T ss_pred ---------cccccCcchHHHHHHHHHHHHHHHHHHHHhcc
Confidence 2444 359999999999988888776655433
No 208
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=96.94 E-value=0.0045 Score=67.48 Aligned_cols=152 Identities=16% Similarity=0.244 Sum_probs=83.5
Q ss_pred hhcHHHHHHHHHHHhhhcchhheecchHHHHHH-hCCCcchh--HHHHHHHhhhhhcccccchhhhhhhccCCchhHHHH
Q 007654 358 LIKADFWLIFFSLLLGSGSGLTVIDNLGQMSQS-LGYDNTHI--FVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMA 434 (594)
Q Consensus 358 l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~~-~g~~~~~~--~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~ 434 (594)
.|+++||.+-..+++--.+=-....-.....++ .|++.+++ ..|+.++...+..++.|.++||++.|++. ...
T Consensus 4 ~~~~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~L----l~~ 79 (412)
T PF01306_consen 4 FKNKNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHL----LWF 79 (412)
T ss_dssp CHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHH----HHH
T ss_pred ccCchHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHH----HHH
Confidence 477888866555444333322333444566664 89988764 78899999999999999999999886653 222
Q ss_pred HHHHHHHHHHHHH-hccC--chhHHHH----HHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHH
Q 007654 435 VAQFVMAIGHIFL-GMGW--PGAMYVG----TLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGL 507 (594)
Q Consensus 435 ~~~~~~~~~~ll~-~~~~--~~~l~~~----~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~ 507 (594)
+..++...+-++. ...+ ...++++ .+.+|+.+.+..++.=+.+-|. .|.++-.||=.=+...+|-. .+..
T Consensus 80 i~~l~~l~~pff~~v~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~--sr~~~feYG~~R~wGSig~a-i~s~ 156 (412)
T PF01306_consen 80 IAILLLLFGPFFIYVFGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAERV--SRRNGFEYGRARMWGSIGFA-IASL 156 (412)
T ss_dssp HHHHHHTCHHHHHHTHHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHH--HHHHSS-HHHHHHHHHHHHH-HHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHH--HHHhcCCcchHHHHhhHHHH-HHHH
Confidence 2222222222221 1111 1123333 3344556666666665554443 35566666665444444444 3566
Q ss_pred HHHHHHHhh
Q 007654 508 IASYIYDHE 516 (594)
Q Consensus 508 l~G~iyd~~ 516 (594)
++|.+++.+
T Consensus 157 ~~G~L~~i~ 165 (412)
T PF01306_consen 157 LAGILFNIN 165 (412)
T ss_dssp HHHHHHHHH
T ss_pred HhheeeeeC
Confidence 788888865
No 209
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=96.92 E-value=0.0023 Score=69.74 Aligned_cols=95 Identities=19% Similarity=0.317 Sum_probs=62.1
Q ss_pred HH-HHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHhccCc-h---hHHHHHHHHHhhhhhccchh
Q 007654 399 FV-SMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLGMGWP-G---AMYVGTLLIGLGYGAHWAIV 473 (594)
Q Consensus 399 ~V-sl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~~~~~-~---~l~~~~~liG~~~G~~~~l~ 473 (594)
.| ..-.++|.+|+++.||+.||+|||+.+-....+.+.+.+ +++ +-.....+ . ++..-=.++|++-|+.+.+-
T Consensus 88 ~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~-~~~-~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlS 165 (538)
T KOG0252|consen 88 LVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSA-LSG-LSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLS 165 (538)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHH-Hhc-cCCCCCCCcchhhHHHHHHHHhhccccCCCcch
Confidence 44 466788999999999999999998876433322222111 111 00112223 1 33334467899999999999
Q ss_pred HHHHHHhhccCchhhhhhHHHh
Q 007654 474 PAAASELFGLKKFGALYNFLTL 495 (594)
Q Consensus 474 p~i~s~~FG~k~~g~nyg~~~~ 495 (594)
..++||+=-.|.=|+.-+.++.
T Consensus 166 AtI~SE~an~~~RGa~iaavFa 187 (538)
T KOG0252|consen 166 ATIMSESANKKTRGAFIAAVFA 187 (538)
T ss_pred HHHhhhhhhhccccceeEEEEE
Confidence 9999998776666665555543
No 210
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=96.87 E-value=0.024 Score=60.44 Aligned_cols=168 Identities=17% Similarity=0.240 Sum_probs=107.4
Q ss_pred HHHHHHHHhhhcchhheecchHHHHHH----hCCCcchh--HHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHH
Q 007654 364 WLIFFSLLLGSGSGLTVIDNLGQMSQS----LGYDNTHI--FVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQ 437 (594)
Q Consensus 364 wll~~~~~~~~g~Gl~vi~n~~~i~~~----~g~~~~~~--~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~ 437 (594)
|++.....+...--=..+..++|+..+ .|.+.+.+ ..++=-++-..--++. -++.||.+..|.. +...
T Consensus 11 ~~li~gIvlia~NLR~~itsvgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a----~~Lar~~g~er~l--~~~L 84 (395)
T COG2807 11 LLLLAGIVLIAFNLRPAITSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAA----PRLARRFGEERSL--FLAL 84 (395)
T ss_pred hHHHHHHHHHHhccchhhhhhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhh----HHHHHHHhhHHHH--HHHH
Confidence 555555555544444455566666654 46655432 2222222222222223 3555555545543 4555
Q ss_pred HHHHHHHHHHhccCchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHHhhh
Q 007654 438 FVMAIGHIFLGMGWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYDHEA 517 (594)
Q Consensus 438 ~~~~~~~ll~~~~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~~ 517 (594)
++.++|.++=.......++.++.++|.+.+-...+.|.++.|.|+ |+-+..-|+-.++-.+++. +++-+.-.+-++.+
T Consensus 85 lli~~G~~iR~~~~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fp-k~~~~mtglYs~sl~~~aa-Laa~lavpla~~~~ 162 (395)
T COG2807 85 LLIAAGILIRSLGGLPLLFLGTLLAGAGIAVINVLLPSLIKRDFP-KRVGLMTGLYSTSLGAGAA-LAAALAVPLAQHSG 162 (395)
T ss_pred HHHHHHHHHHhcccHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcc-cchhhHHhHHHHHHHHHHH-HHhhhhhHHHHhhc
Confidence 666677766544555679999999999999999999999999997 8888888887777777665 35555544444432
Q ss_pred hcccCcccccccccccccCCCCCCCCCccccCcccHHHHHHHHHHHHHHHHHHHH
Q 007654 518 EKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTSMIMSGLCIVAVILSMI 572 (594)
Q Consensus 518 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~~ 572 (594)
..+.++...+..+++++++=+-
T Consensus 163 ---------------------------------gW~~aL~~WAl~allAl~~WlP 184 (395)
T COG2807 163 ---------------------------------GWRGALGFWALLALLALLIWLP 184 (395)
T ss_pred ---------------------------------cHHHHHHHHHHHHHHHHHHHhh
Confidence 4999999999999887665443
No 211
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=96.62 E-value=0.25 Score=54.48 Aligned_cols=107 Identities=23% Similarity=0.322 Sum_probs=76.7
Q ss_pred cccHHHHhhhCCChhhHHHHHHHHhhhhhcccchhhhhchhh-----hHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHH
Q 007654 37 SISPVIKSSLNYNQKQIARLGVAKDLGDSVGFLAGSLCEVLP-----IWGALLVGALQNFIGYGWVWLIVTGRAPVLPLW 111 (594)
Q Consensus 37 ~ys~~Lk~~lg~sq~~l~~i~~a~~~G~~~gi~~G~l~D~~g-----p~~~l~iG~~~~~~Gy~~~~l~~~g~i~~~s~~ 111 (594)
.-.+-+|+++|+|.+|++.+....++--.+-++.|++.|.+| +|+=+++|+++..+++..+. ...+.. .+..
T Consensus 11 ~~~~~l~~~l~ls~~~~~~~~~~~~lPw~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~-~~~~~~--~s~~ 87 (433)
T PF03092_consen 11 AIYPFLKDDLGLSPAQLQRLSSLASLPWSIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLA-LLPASE--SSAA 87 (433)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHhCchHHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHH-hccccc--chhh
Confidence 345679999999999999999888888888999999999997 57778888888765555432 223322 2344
Q ss_pred HHHHHHHhhccccchhhhhH---HHHHHHhcCCCCCce
Q 007654 112 AMCILIFVGNNGETYFNTAA---LVSCVQNFPKSRGPV 146 (594)
Q Consensus 112 ~l~~~~~l~g~G~~~~~taa---l~t~~k~FP~~RG~~ 146 (594)
...++.++...|..+.|.++ ++-.++.-|..||..
T Consensus 88 ~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~l 125 (433)
T PF03092_consen 88 IAVVLLFLASFGYAFADVAADALVVELARREPESRGDL 125 (433)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHH
Confidence 44456666777777776644 455667778776654
No 212
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=96.58 E-value=0.041 Score=61.17 Aligned_cols=178 Identities=17% Similarity=0.138 Sum_probs=107.2
Q ss_pred hcHHHHHHHHHHHhhhcchhheecchHHHHHH-hCCCcchh--HHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHH
Q 007654 359 IKADFWLIFFSLLLGSGSGLTVIDNLGQMSQS-LGYDNTHI--FVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAV 435 (594)
Q Consensus 359 ~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~~-~g~~~~~~--~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~ 435 (594)
.+....++...++ ..|..-.+..-+.++.++ +|.+.++. ++++..+--.+--+ ||.++|++.. .+..|.+.+.+
T Consensus 24 ~~~~~~~~~~~y~-~qGl~~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i-~G~rRr~~l~~ 100 (468)
T TIGR00788 24 PRVVLAIGLQVLF-VKGIAGLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPL-FGYTKRWYLVL 100 (468)
T ss_pred cchHHHHHHHHHH-HhhHHHHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCC-CCccchHHHHH
Confidence 3344455554443 444444444566667764 79998754 77888888888544 9999999952 12223334444
Q ss_pred HHHHH-HHHHHHHhccC--chhHHHHHHHHHhhhhhccchhHHHHHHhhccCch---hhhhhHHHhhhhHHHHHHHHHHH
Q 007654 436 AQFVM-AIGHIFLGMGW--PGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKF---GALYNFLTLANPAGSLVFSGLIA 509 (594)
Q Consensus 436 ~~~~~-~~~~ll~~~~~--~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~---g~nyg~~~~a~~~g~~~~~~~l~ 509 (594)
..++. +++...+...+ .....+...+++++....-...=.++.|..- +.- +.+....+....+|.. +++.+.
T Consensus 101 ~~~l~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~-vg~~l~ 178 (468)
T TIGR00788 101 SGLLGSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGL-ISSLLG 178 (468)
T ss_pred HHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHH-HHHHHH
Confidence 44443 23322222211 1122235667788888777778888888886 433 2344454544456666 588889
Q ss_pred HHHHHhhhhcccCcccccccccccccCCCCCCCCCccccCcccHHHHHHHHHHHHHHHHHHHHHHh
Q 007654 510 SYIYDHEAEKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTSMIMSGLCIVAVILSMILVH 575 (594)
Q Consensus 510 G~iyd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~~l~~ 575 (594)
|.+.|..+ .+..|.+++++.++..+...+++.
T Consensus 179 G~l~~~~~----------------------------------~~~~f~~~a~l~ll~~~~~~~~~E 210 (468)
T TIGR00788 179 GPLLDKTL----------------------------------TRILFLITAALLLLQLFVSNLSKE 210 (468)
T ss_pred HHHHHhcC----------------------------------cchHHHHHHHHHHHHHHHHHhccc
Confidence 98888764 667888888877776554455444
No 213
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=96.58 E-value=1.7 Score=48.33 Aligned_cols=147 Identities=16% Similarity=0.184 Sum_probs=85.9
Q ss_pred HhhhCCChhhHHHH-HHHHhhhhhcccchhhhhchh-hhHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHhh
Q 007654 43 KSSLNYNQKQIARL-GVAKDLGDSVGFLAGSLCEVL-PIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVG 120 (594)
Q Consensus 43 k~~lg~sq~~l~~i-~~a~~~G~~~gi~~G~l~D~~-gp~~~l~iG~~~~~~Gy~~~~l~~~g~i~~~s~~~l~~~~~l~ 120 (594)
++.+|+||++-..+ +....+-=...+++|++.||+ |.|-++.+|+++..+|+..+. +++.. . ...+++-..+.
T Consensus 53 ~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~--~~~~~-~--~~gl~i~L~~I 127 (498)
T COG3104 53 GDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLA--ISSVS-G--PGGLYIGLALI 127 (498)
T ss_pred cccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHh--ccccc-c--ccHHHHHHHHH
Confidence 33367999988775 444333323478999999999 999999999999999999854 33311 1 11233222223
Q ss_pred ccccchhhhhHHHHHHHhcCC--CCCceehhhHhhhh--hhHHHHHHHHHHhcCCChH-HHHHHHHHHHHHHHHhhheee
Q 007654 121 NNGETYFNTAALVSCVQNFPK--SRGPVVGILKGFAG--LGGAILTQVYTMIHAPDHA-NLIFMVAVGPAMVVIALMFII 195 (594)
Q Consensus 121 g~G~~~~~taal~t~~k~FP~--~RG~~~Gl~~a~~G--LSa~i~s~i~~~~f~~~~~-~fll~la~~~~~v~l~~~~~i 195 (594)
+.|.|.+=+.+-.-.-+-+|+ .| +-.|...=+.| +| ++++++-......+.. ..-+-++.+....+++..++.
T Consensus 128 ~iG~Gl~K~NiS~llg~ly~~~Dpr-rD~gFt~fY~~iNiG-sl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~ 205 (498)
T COG3104 128 IVGTGLFKPNISSLLGELYPKDDPR-RDGGFTLFYMGINIG-SLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLG 205 (498)
T ss_pred HhccccccccHHHHHHHhcCCCCcc-cCCCccEEEEEeehH-HHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc
Confidence 367777655555555566862 34 44443332322 34 3555555544444333 233444555666666666655
Q ss_pred c
Q 007654 196 R 196 (594)
Q Consensus 196 r 196 (594)
|
T Consensus 206 ~ 206 (498)
T COG3104 206 R 206 (498)
T ss_pred c
Confidence 5
No 214
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=96.50 E-value=0.0078 Score=64.41 Aligned_cols=108 Identities=19% Similarity=0.228 Sum_probs=79.9
Q ss_pred HHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHhccCc-hhHHHHHHHHHhhhhhccchhHHHH
Q 007654 399 FVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLGMGWP-GAMYVGTLLIGLGYGAHWAIVPAAA 477 (594)
Q Consensus 399 ~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~~~~~-~~l~~~~~liG~~~G~~~~l~p~i~ 477 (594)
.=|.+++..++.-..||-+||+.||| +..+ +.....++..++++.... ..+..+=.+.|+.- +..++.-+++
T Consensus 73 lGSsF~ilQ~~sS~~~G~~SD~yGRk-----pvll-~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~k-gnl~v~rAii 145 (451)
T KOG2615|consen 73 LGSSFSILQFISSPLWGCLSDRYGRK-----PVLL-ACLIGVALSYLLWALSRNFAAFVLARFLGGIFK-GNLSVIRAII 145 (451)
T ss_pred HhhHHHHHHHHhhhhhhhhhhhhCch-----HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc-CchHHHHHHH
Confidence 44789999999999999999999993 3332 223333444444443332 23333344555544 5789999999
Q ss_pred HHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHH
Q 007654 478 SELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYD 514 (594)
Q Consensus 478 s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd 514 (594)
+|.+-.|+-+.-.+.+.+++.+|-+ +||.+.|++-.
T Consensus 146 sdV~sek~r~l~ms~v~~a~~lGfi-lGPmIGgyla~ 181 (451)
T KOG2615|consen 146 SDVVSEKYRPLGMSLVGTAFGLGFI-LGPMIGGYLAQ 181 (451)
T ss_pred HhhcChhhccceeeeeehhhhcchh-hcchhhhHHHh
Confidence 9999999999999999999999987 59999999887
No 215
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=96.40 E-value=0.044 Score=59.78 Aligned_cols=154 Identities=19% Similarity=0.177 Sum_probs=98.6
Q ss_pred hhhcchhHH-HHHHHHHHHHhcCcccccccccHHHHhhhCCChhhHHHHHHHHhhhh-hcccchhhhhchhhhHHHHHHH
Q 007654 9 VSFFNNRWL-VFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGD-SVGFLAGSLCEVLPIWGALLVG 86 (594)
Q Consensus 9 ~~~~~~Rw~-~l~a~~~i~l~~Gt~Y~fS~ys~~Lk~~lg~sq~~l~~i~~a~~~G~-~~gi~~G~l~D~~gp~~~l~iG 86 (594)
+-.+.+|.+ -++.+.+++...+..|.|. +..+++.-|++......+-..+.+.. .+.+..+++..|+|++.++.++
T Consensus 202 ~llk~~~~~~Fll~~~l~~~~~~~~~~f~--~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a 279 (400)
T PF03825_consen 202 KLLKNPRFLVFLLAAFLIGISHAAYYTFF--SIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLA 279 (400)
T ss_pred HHhcCccHHHHHHHHHHHHHHHHHHHHHH--HHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 333445554 5567777788889888886 44477665566665554322333334 3466789999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCChhHHHHHHHH----HhhccccchhhhhHHHHHHHhcCCC-CCceehhhHh-hhhhhHHH
Q 007654 87 ALQNFIGYGWVWLIVTGRAPVLPLWAMCILI----FVGNNGETYFNTAALVSCVQNFPKS-RGPVVGILKG-FAGLGGAI 160 (594)
Q Consensus 87 ~~~~~~Gy~~~~l~~~g~i~~~s~~~l~~~~----~l~g~G~~~~~taal~t~~k~FP~~-RG~~~Gl~~a-~~GLSa~i 160 (594)
.+...+=+. .+.-..+ +.|...... .+=|..-+.++.+++.-..++.|++ |+++-|+..+ .+|+|+.+
T Consensus 280 ~~~~~vR~~----l~a~~~~--~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~i 353 (400)
T PF03825_consen 280 LVAYAVRWL----LYAYFSD--PWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAI 353 (400)
T ss_pred HHHHHHHHH----HHHHhcC--CcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHH
Confidence 885444444 3332211 122222111 2234445566888999999999964 8999999665 57999988
Q ss_pred HHHHHHHhcC
Q 007654 161 LTQVYTMIHA 170 (594)
Q Consensus 161 ~s~i~~~~f~ 170 (594)
-+.+.-..++
T Consensus 354 G~~igG~l~~ 363 (400)
T PF03825_consen 354 GSLIGGWLYD 363 (400)
T ss_pred HHHHHHHHHH
Confidence 7777655553
No 216
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=96.37 E-value=0.016 Score=65.02 Aligned_cols=117 Identities=21% Similarity=0.284 Sum_probs=82.6
Q ss_pred hheecchHHHHHHhC---CC--cc-----hhHHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHH
Q 007654 378 LTVIDNLGQMSQSLG---YD--NT-----HIFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFL 447 (594)
Q Consensus 378 l~vi~n~~~i~~~~g---~~--~~-----~~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~ 447 (594)
..+..++....++.. .. .. ...+|...+.+.+|.+.+|.++|++|||+.. .++.++..+|-++.
T Consensus 63 ~g~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l------~~~~~~~~iG~ii~ 136 (513)
T KOG0254|consen 63 IGGISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTL------LLAVVLFLIGAIII 136 (513)
T ss_pred cccchhhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH------HHHHHHHHHHHHHH
Confidence 455666666655532 11 11 3589999999999999999999999996653 44455555565544
Q ss_pred hc-cCchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHH
Q 007654 448 GM-GWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAG 500 (594)
Q Consensus 448 ~~-~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g 500 (594)
.. .+...+.++-++.|++.|+...+.|..++|+=..+.=|..=....+...+|
T Consensus 137 ~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~G 190 (513)
T KOG0254|consen 137 ALAPSWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIG 190 (513)
T ss_pred HHhhhHHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHH
Confidence 43 355679999999999999999999999999976555444444444444443
No 217
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=96.32 E-value=0.027 Score=59.02 Aligned_cols=118 Identities=16% Similarity=0.110 Sum_probs=79.0
Q ss_pred cHHHHh--hhCCChhhHHHHHHHHhhhhhc-ccchhhhhchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHH
Q 007654 39 SPVIKS--SLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCI 115 (594)
Q Consensus 39 s~~Lk~--~lg~sq~~l~~i~~a~~~G~~~-gi~~G~l~D~~gp~~~l~iG~~~~~~Gy~~~~l~~~g~i~~~s~~~l~~ 115 (594)
..-+++ .+|++.++........-.+... .+.++.+.||+|++..+.++.++..++..+.+.. . . .+.+..
T Consensus 164 ~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~--~---~--~~~~~~ 236 (310)
T TIGR01272 164 VNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALT--H---G--YVAMWF 236 (310)
T ss_pred HHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHc--C---C--HHHHHH
Confidence 344554 3799988888863333333333 5678999999998888788887776666544321 1 1 122222
Q ss_pred HHHhhccccchhhhhHHHHHHHhcCCCCCceehhhHhhhhhhHHHHHHHH
Q 007654 116 LIFVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAILTQVY 165 (594)
Q Consensus 116 ~~~l~g~G~~~~~taal~t~~k~FP~~RG~~~Gl~~a~~GLSa~i~s~i~ 165 (594)
+. +.|++.+..+........+.+|++.|.++++. ..-.+|+++...+.
T Consensus 237 ~~-l~g~~~s~i~P~~~s~a~~~~~~~~~~asai~-~~~~~Gg~i~P~l~ 284 (310)
T TIGR01272 237 VL-ALGLFNSIMFPTIFSLALNALGRHTSQGSGIL-CLAIVGGAIVPLLQ 284 (310)
T ss_pred HH-HHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHH-HHHHhcchHHHHHH
Confidence 22 34578888888989999999999989999886 45557777766544
No 218
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=96.28 E-value=0.017 Score=65.06 Aligned_cols=168 Identities=16% Similarity=0.219 Sum_probs=115.0
Q ss_pred HHHHHHHHhhhcchhheecchH----HHHHHhCCCcc--hhHHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHH
Q 007654 364 WLIFFSLLLGSGSGLTVIDNLG----QMSQSLGYDNT--HIFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQ 437 (594)
Q Consensus 364 wll~~~~~~~~g~Gl~vi~n~~----~i~~~~g~~~~--~~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~ 437 (594)
|...+..++..+..-.+++..+ .+.++.+.+.. +...|+..-...+.-.+++.+.||++.|. .. .+..
T Consensus 45 WvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~-----v~-i~G~ 118 (509)
T KOG2504|consen 45 WVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRT-----VM-IAGG 118 (509)
T ss_pred eeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchH-----HH-HHHH
Confidence 4444444445555555555555 33344555554 33566666666666677888888876633 33 4555
Q ss_pred HHHHHHHHHHhccC-c-hhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHHh
Q 007654 438 FVMAIGHIFLGMGW-P-GAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYDH 515 (594)
Q Consensus 438 ~~~~~~~ll~~~~~-~-~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~ 515 (594)
++..+|+++..+.. . ..+..-.++.|+++|..+.-...++..||- |+=+.-=|+...+.++|..+| |.+--++.|.
T Consensus 119 ~v~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~-kkR~lA~Gia~~GsG~G~~~~-~~l~~~l~~~ 196 (509)
T KOG2504|consen 119 LVAALGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFE-KKRALATGIAVSGTGVGTVVF-PPLLKYLLSK 196 (509)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhhhhhHhH-HHHHHHHhhhhccCCcceeeH-HHHHHHHHHH
Confidence 66777776655433 2 334446677799999999999999999996 888888899999999999987 5688899998
Q ss_pred hhhcccCcccccccccccccCCCCCCCCCccccCcccHHHHHHHHHHHHHHHHHHHHH
Q 007654 516 EAEKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTSMIMSGLCIVAVILSMIL 573 (594)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~~l 573 (594)
.| +|.++.+...+++-.++....+
T Consensus 197 ~G----------------------------------~r~~~l~~~~~~l~~~~~~~~~ 220 (509)
T KOG2504|consen 197 YG----------------------------------WRGALLIFGGISLNVLVAGALL 220 (509)
T ss_pred hC----------------------------------cHHHHHHHHHHHHHHHHHHHHc
Confidence 86 7888888888875555444443
No 219
>PRK09669 putative symporter YagG; Provisional
Probab=96.28 E-value=0.04 Score=60.34 Aligned_cols=156 Identities=15% Similarity=0.083 Sum_probs=84.3
Q ss_pred HhCCCcch--hHHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHhccC---c---hhHHHHHHH
Q 007654 390 SLGYDNTH--IFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLGMGW---P---GAMYVGTLL 461 (594)
Q Consensus 390 ~~g~~~~~--~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~~~~---~---~~l~~~~~l 461 (594)
.+|.+... ...++..++.++.-++.|+++||...|++-.|+|.+...........+++...+ . ..+++...+
T Consensus 39 ~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~~~~~~~l 118 (444)
T PRK09669 39 VFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKIIYACVTYIL 118 (444)
T ss_pred hcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHH
Confidence 46777654 378889999999999999999998766666677775433332222222233221 1 123334455
Q ss_pred HHhhhhhccchhHHHHHHhhc-cCchhhhhhHHHhhhhHHHHHHHHHHHHHHHHhhhhcccCcccccccccccccCCCCC
Q 007654 462 IGLGYGAHWAIVPAAASELFG-LKKFGALYNFLTLANPAGSLVFSGLIASYIYDHEAEKQHQPHHHLLNAGSIFTSMPRV 540 (594)
Q Consensus 462 iG~~~G~~~~l~p~i~s~~FG-~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~~~~~~~~~~~~~~~~~~~~~~~~~ 540 (594)
.+.+|....--+-++.+|..- .++-++..++-.....+|..+ ++.+...+....+...
T Consensus 119 ~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i-~~~~~~pl~~~~~~~~-------------------- 177 (444)
T PRK09669 119 LSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLI-VSVIALPLVDILGKGD-------------------- 177 (444)
T ss_pred HHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCCc--------------------
Confidence 566676655555566666652 122333333333333333332 2222222222222100
Q ss_pred CCCCccccCcccHHHHHHHHHHHHHHHHHHHHH
Q 007654 541 DEPLKCEGSICYFLTSMIMSGLCIVAVILSMIL 573 (594)
Q Consensus 541 ~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~~l 573 (594)
-...|+..+.+.+.++++..+++.+.
T Consensus 178 -------~~~g~~~~~~i~~ii~~v~~~~~~~~ 203 (444)
T PRK09669 178 -------EQKGYFYAMMVMGLLGVVLFFCCFFM 203 (444)
T ss_pred -------hhhhHHHHHHHHHHHHHHHHHHHhCC
Confidence 01368888888888777766655543
No 220
>PRK09848 glucuronide transporter; Provisional
Probab=96.16 E-value=0.027 Score=61.75 Aligned_cols=86 Identities=17% Similarity=0.162 Sum_probs=54.5
Q ss_pred HHhhhCCChhhHHHHHHHHhhhhh-cccchhhhhchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHhh
Q 007654 42 IKSSLNYNQKQIARLGVAKDLGDS-VGFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVG 120 (594)
Q Consensus 42 Lk~~lg~sq~~l~~i~~a~~~G~~-~gi~~G~l~D~~gp~~~l~iG~~~~~~Gy~~~~l~~~g~i~~~s~~~l~~~~~l~ 120 (594)
+++.+|.+......+.+...++.. ..++.+.+.||+|+|.++.+|.++..+|+.+++.. +..++|.+....++.
T Consensus 255 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~-----~~~~~~~~~~~~~l~ 329 (448)
T PRK09848 255 VRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWV-----SVWSLPVALVALAIA 329 (448)
T ss_pred EeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHc-----CchhHHHHHHHHHHH
Confidence 355677766544444444344443 35678999999999999999998888888776532 222456555445555
Q ss_pred ccccchhhhhHH
Q 007654 121 NNGETYFNTAAL 132 (594)
Q Consensus 121 g~G~~~~~taal 132 (594)
+.|.+...+...
T Consensus 330 g~G~~~~~~~~~ 341 (448)
T PRK09848 330 SIGQGVTMTVMW 341 (448)
T ss_pred HHHHHHHHHHHH
Confidence 666665554433
No 221
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=96.13 E-value=0.02 Score=61.94 Aligned_cols=143 Identities=18% Similarity=0.212 Sum_probs=83.5
Q ss_pred ccccccH-HHHhhhCCChhhHHHH-HHHHhhhhhcccchhhhhchhhh-HHHHHHHHHHHHHHHHHHHHHHhcCCCChhH
Q 007654 34 LFGSISP-VIKSSLNYNQKQIARL-GVAKDLGDSVGFLAGSLCEVLPI-WGALLVGALQNFIGYGWVWLIVTGRAPVLPL 110 (594)
Q Consensus 34 ~fS~ys~-~Lk~~lg~sq~~l~~i-~~a~~~G~~~gi~~G~l~D~~gp-~~~l~iG~~~~~~Gy~~~~l~~~g~i~~~s~ 110 (594)
.||.|=| -++++|++|..+-..+ ..+..+|...=..+|.+.||+|+ |+++..-.++. ++-....+..++.-..++.
T Consensus 236 gfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~-~~~~~l~~~~~~~~~~~~~ 314 (417)
T COG2223 236 GFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMA-LAAALLSLFLTGFGHGGSF 314 (417)
T ss_pred HHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHH-HHHHHHHccccccccCcch
Confidence 4444433 3788999999988776 55556666667889999999987 44433333332 2322222222221101121
Q ss_pred H-HHH---HHHHhhccccchhhhhHHHHHHHhcCCCCCceehhhHhhhhhhHHHHHHHHHHhcC--CC-hHHHHHHHH
Q 007654 111 W-AMC---ILIFVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAILTQVYTMIHA--PD-HANLIFMVA 181 (594)
Q Consensus 111 ~-~l~---~~~~l~g~G~~~~~taal~t~~k~FP~~RG~~~Gl~~a~~GLSa~i~s~i~~~~f~--~~-~~~fll~la 181 (594)
+ ... ...+..|.|.+ ++-.-.-.-||++-|.++|+.-+.-|+|++++.+..-..++ ++ ...|.++..
T Consensus 315 ~~~~~~~l~l~~~~G~GnG----svfk~Ip~if~~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~ 388 (417)
T COG2223 315 VVFVAVFLALFVFAGLGNG----SVFKMIPVIFPKETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLA 388 (417)
T ss_pred HHHHHHHHHHHHHhccCcc----hheeechHHHHhhhhHHHHHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHH
Confidence 1 111 12222333333 44445556789999999999999999999888777766653 33 334444443
No 222
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=95.83 E-value=0.7 Score=49.92 Aligned_cols=65 Identities=12% Similarity=0.191 Sum_probs=53.0
Q ss_pred CchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHHhh
Q 007654 451 WPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYDHE 516 (594)
Q Consensus 451 ~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~ 516 (594)
.+..++.++.+--++--..-...-.++..+-+...=|+.-|+..+...++=. +||.+.|.++.=.
T Consensus 351 ~~~~l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRa-iGPlv~g~i~~Ws 415 (451)
T KOG2615|consen 351 TPVVLYLGSTLKSFSTASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARA-IGPLVSGVIFSWS 415 (451)
T ss_pred cchhhhHHHHHHHHHHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHH-hhhhhhheeEEEe
Confidence 3567888888888887777777778888888888899999999988888877 5998888777533
No 223
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=95.82 E-value=1.4 Score=48.27 Aligned_cols=131 Identities=12% Similarity=0.156 Sum_probs=74.0
Q ss_pred HHHhhc--HHHHHHHHHHHhhhcchhheecchHHHH-HHhCCC-cch----hHHHHHHHhhhhhcccccchhhhhhhccC
Q 007654 355 TQALIK--ADFWLIFFSLLLGSGSGLTVIDNLGQMS-QSLGYD-NTH----IFVSMISIWNFLGRVGGGYFSEIIVRDYA 426 (594)
Q Consensus 355 ~e~l~t--~~Fwll~~~~~~~~g~Gl~vi~n~~~i~-~~~g~~-~~~----~~Vsl~si~n~~GRl~~G~lsD~l~r~~~ 426 (594)
+++.++ ...|-+|+++.. +|-..+.|-.|.. ++..-+ ... ..-++..+.++++-+..|++..++.+
T Consensus 241 ~~~y~~~~ll~WSlWWa~at---cgy~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~--- 314 (412)
T PF01770_consen 241 KSCYSNPRLLLWSLWWAFAT---CGYYQVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDR--- 314 (412)
T ss_pred HHHhcCchHHHHHHHHHHHH---hHHHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHH---
Confidence 344433 457889998763 3433333444433 223111 111 13355666677788888888544333
Q ss_pred CchhHHHHHHHHHHHHHHHHHhc-cCchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhH
Q 007654 427 YPRPVAMAVAQFVMAIGHIFLGM-GWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNF 492 (594)
Q Consensus 427 ~~r~~~l~~~~~~~~~~~ll~~~-~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~ 492 (594)
.....+....++.+...++... .+....+.+-++.+..|-...++.-+-++..--.+.||-.+|+
T Consensus 315 -~~~l~l~~~S~l~a~~L~lm~~t~~Iwv~Y~~yIif~~~y~fliTiA~~qIA~~l~~e~yaLVFGi 380 (412)
T PF01770_consen 315 -WGELALGVFSLLQAGLLFLMSFTGNIWVCYAGYIIFRSLYMFLITIASFQIAKNLSEERYALVFGI 380 (412)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccceeeeeee
Confidence 1223344444444433333333 3345678888888888988888888878777766665555554
No 224
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=95.45 E-value=0.24 Score=55.35 Aligned_cols=131 Identities=15% Similarity=0.114 Sum_probs=81.6
Q ss_pred hhhhcchhHH--HHHHHHHHHHhcCcccccccccHHHHhhhCCChhhHHHHHHHHhhhhhc-ccchhhhhchhhhH--HH
Q 007654 8 FVSFFNNRWL--VFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIW--GA 82 (594)
Q Consensus 8 ~~~~~~~Rw~--~l~a~~~i~l~~Gt~Y~fS~ys~~Lk~~lg~sq~~l~~i~~a~~~G~~~-gi~~G~l~D~~gp~--~~ 82 (594)
+|+..+.|-+ -|++-.+-+-...|. .+...--.++.+|++++|+..+.+..++.+.. .++.|++.||+||| .+
T Consensus 274 ~k~~~~~~~~~~fLia~~l~~dg~~ti--~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~ 351 (477)
T PF11700_consen 274 FKEIRKLRQLFLFLIAYFLYSDGVNTI--ISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRT 351 (477)
T ss_pred HHHHHhChHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHH
Confidence 4444444433 344434444333333 33334446678999999999988888887765 67899999999998 55
Q ss_pred HHHHHHHH----HHHHHHHHHHHhcCCCChhHHHHHHHHHhhccccchhhhhHHHHHHHhcCCCC
Q 007654 83 LLVGALQN----FIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPKSR 143 (594)
Q Consensus 83 l~iG~~~~----~~Gy~~~~l~~~g~i~~~s~~~l~~~~~l~g~G~~~~~taal~t~~k~FP~~R 143 (594)
+.+..+.. ..|+.+++.. .....+-|.++++.++.|...|..++++=..-.|-=|+.|
T Consensus 352 l~~~l~~~~~i~~~g~~G~~~~---~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~ 413 (477)
T PF11700_consen 352 LLISLILWIIIPLYGLFGFWPS---FFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGR 413 (477)
T ss_pred HHHHHHHHHHHHHHHHHHhhhc---ccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCch
Confidence 44444332 2222222211 2212356777788888888888777777777777778654
No 225
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=95.20 E-value=0.2 Score=54.60 Aligned_cols=143 Identities=17% Similarity=0.235 Sum_probs=93.0
Q ss_pred HHHHHHHHHHHhcCcccccccccHHHHhhhCCChhhHHHHHHHHhhhhhc-ccchhhhhchhhhHHHHHHHHHHHHHHHH
Q 007654 17 LVFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYG 95 (594)
Q Consensus 17 ~~l~a~~~i~l~~Gt~Y~fS~ys~~Lk~~lg~sq~~l~~i~~a~~~G~~~-gi~~G~l~D~~gp~~~l~iG~~~~~~Gy~ 95 (594)
+-|++-.+.+=...|.-+++. ---++.+||++.|+-.+++..++.+.. +++.|++-||+|+|.++.+|-+...+-..
T Consensus 256 ~FLiA~~~~~DGv~til~~~~--~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~ 333 (438)
T COG2270 256 LFLIARFFYIDGVNTILAMGG--VFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAAL 333 (438)
T ss_pred HHHHHHHHHHhhHHHHHHHHH--HHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHH
Confidence 345555555555555544432 113558999999999998888888855 88999999999999998888887544433
Q ss_pred HHHHHHhcCCCChhHHHHHHHHHhhccccchhhhhHHHHHHHhcCCCC-CceehhhHhhhhhhHHHHHHHHHHhc
Q 007654 96 WVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPKSR-GPVVGILKGFAGLGGAILTQVYTMIH 169 (594)
Q Consensus 96 ~~~l~~~g~i~~~s~~~l~~~~~l~g~G~~~~~taal~t~~k~FP~~R-G~~~Gl~~a~~GLSa~i~s~i~~~~f 169 (594)
++..... ...+|. ++++.|...|-....+=.--.|+.|++| |.--|+- +.+|=.++++.+.--+++
T Consensus 334 --~~~~~~~--~~~f~i---~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFgly-altgra~S~~gp~lv~v~ 400 (438)
T COG2270 334 --YLIFLEG--ELDFWI---LGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLY-ALTGRAASFLGPFLVAVI 400 (438)
T ss_pred --HHHHccc--cHHHHH---HHHHHHHhcchHHHHHHHHHHHhCCCccccceeehh-hhhhhHHHHHHHHHHHHH
Confidence 2222222 223554 4555556666667777888899998654 6655553 334445556655555544
No 226
>PRK10429 melibiose:sodium symporter; Provisional
Probab=95.05 E-value=0.12 Score=57.31 Aligned_cols=60 Identities=18% Similarity=0.089 Sum_probs=36.7
Q ss_pred ccchhhhhchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHhhccccchhh
Q 007654 67 GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFN 128 (594)
Q Consensus 67 gi~~G~l~D~~gp~~~l~iG~~~~~~Gy~~~~l~~~g~i~~~s~~~l~~~~~l~g~G~~~~~ 128 (594)
.++.+.+.||+|+|.++.++.++..++...++.. +..+..+.|.+.+..++.+.+.+..+
T Consensus 283 ~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~l~g~~~~~~~ 342 (473)
T PRK10429 283 LILFPRLVKSLSRRILWAGASIFPVLSCGVLLLM--GLAAPHNALLIVIAGILLNIGTALFW 342 (473)
T ss_pred HHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHH--hccCchhHHHHHHHHHHHHHHHHHHH
Confidence 5678999999999999888887766666554332 11122234544444455555555443
No 227
>PF13347 MFS_2: MFS/sugar transport protein
Probab=94.91 E-value=0.18 Score=54.94 Aligned_cols=115 Identities=17% Similarity=0.231 Sum_probs=72.0
Q ss_pred hhhhhhcchh-HHHHHHHHHH-HHhcCcccccccccHHHHhhhCCChhhHHHHHHHHhhhhhc-ccchhhhhchhhhHHH
Q 007654 6 ERFVSFFNNR-WLVFVAAMWI-QSCAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGA 82 (594)
Q Consensus 6 ~~~~~~~~~R-w~~l~a~~~i-~l~~Gt~Y~fS~ys~~Lk~~lg~sq~~l~~i~~a~~~G~~~-gi~~G~l~D~~gp~~~ 82 (594)
+..|+..+|| |+.++...+. +++.+..-.+..| -.+..+|.+ ...+.+.....++... .++.+.+.||+|+|-+
T Consensus 216 ~~~~~~~~nr~~~~l~~~~~~~~~~~~~~~~~~~y--~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~ 292 (428)
T PF13347_consen 216 DSLRSLFRNRPFRILLLAFFLQWLAFALMNTFLPY--YFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKV 292 (428)
T ss_pred cchhhhcccchHHHHHHHHHHHHhhhhhhhhHHHH--HHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceee
Confidence 3345555555 5544444444 4444444444433 344445555 4445555555555544 6778999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHhhccccchhh
Q 007654 83 LLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFN 128 (594)
Q Consensus 83 l~iG~~~~~~Gy~~~~l~~~g~i~~~s~~~l~~~~~l~g~G~~~~~ 128 (594)
..+|.+...+++.+++..-. .+.|.+.+..++.|.|.+..+
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~i~~~l~gi~~~~~~ 333 (428)
T PF13347_consen 293 YIIGLLLAALGFLLLFFLGP-----GSPWLVLILFILAGIGYGAFF 333 (428)
T ss_pred hhhhHHHHHHHHHHHHHHHh-----hhHHHHHHHHHHhHhhhcccc
Confidence 99999999888888776643 245666666666666666443
No 228
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=94.52 E-value=0.011 Score=67.08 Aligned_cols=77 Identities=17% Similarity=0.107 Sum_probs=0.0
Q ss_pred HHHHHHHHHhcCcccccccccHHHHhhhCCChhhHHHHHHHHhhhhhc-ccchhhhhchhhhHHHHHHHHHHHHHHHHHH
Q 007654 19 FVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWV 97 (594)
Q Consensus 19 l~a~~~i~l~~Gt~Y~fS~ys~~Lk~~lg~sq~~l~~i~~a~~~G~~~-gi~~G~l~D~~gp~~~l~iG~~~~~~Gy~~~ 97 (594)
+....++| ..-.-|.=++-+ .+++||+++.+|...|..+-|++..+ .++..++-+|..+.--+.+|+++.++|..++
T Consensus 8 ~~~~~~~q-~~~~g~~~~~lt-tiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~ 85 (539)
T PF03137_consen 8 LCLLGLFQ-MMVSGYVNSSLT-TIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLF 85 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHH-HHHHHHHHHHHH-HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHH
Confidence 33444556 445556666665 89999999999999999999999965 5667777766533223466777777777764
No 229
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=94.48 E-value=0.4 Score=53.55 Aligned_cols=138 Identities=11% Similarity=0.053 Sum_probs=86.6
Q ss_pred CcccccccccHHHHhhhCCChhhHHHHHHHHhhhh-hcccchhhhhchhhhHHHHHHHHHHHHHHHHHHH--HHHhcCC-
Q 007654 30 GIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGD-SVGFLAGSLCEVLPIWGALLVGALQNFIGYGWVW--LIVTGRA- 105 (594)
Q Consensus 30 Gt~Y~fS~ys~~Lk~~lg~sq~~l~~i~~a~~~G~-~~gi~~G~l~D~~gp~~~l~iG~~~~~~Gy~~~~--l~~~g~i- 105 (594)
...++=..||..+-++-|+++.+...+.++..+-. .+.+.+.++.||+|+|+.++++..++.+-...+- +...+..
T Consensus 284 sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~ 363 (485)
T KOG0569|consen 284 SGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFG 363 (485)
T ss_pred cCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 34556678899999999999998888755555555 4478899999999999999998887755544432 1222222
Q ss_pred CChhHHHH-HHHHHhhccccchhhhhHHHHHHHhcCC-CCCceehhhHhhhhhhHHHHHHHHHHh
Q 007654 106 PVLPLWAM-CILIFVGNNGETYFNTAALVSCVQNFPK-SRGPVVGILKGFAGLGGAILTQVYTMI 168 (594)
Q Consensus 106 ~~~s~~~l-~~~~~l~g~G~~~~~taal~t~~k~FP~-~RG~~~Gl~~a~~GLSa~i~s~i~~~~ 168 (594)
+..++..+ +.+..+..++.|.. .-+.--...-||. .|..+........=++.++....+.-.
T Consensus 364 ~~~~y~~i~~~~~~~~~f~~G~g-pi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l 427 (485)
T KOG0569|consen 364 SWLSYLCIAAIFLFIISFAIGPG-PIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPL 427 (485)
T ss_pred hHHHHHHHHHHHHHHHhhhcCCC-chhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111111 22334444444422 2233345677874 699888888777777766665555443
No 230
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=94.36 E-value=1.9 Score=48.03 Aligned_cols=121 Identities=12% Similarity=0.167 Sum_probs=84.2
Q ss_pred CCCcch--hHHHHHHHhhhhhccccc-chhhhhhhccCCchhHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHhhhhh
Q 007654 392 GYDNTH--IFVSMISIWNFLGRVGGG-YFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLGMGWPGAMYVGTLLIGLGYGA 468 (594)
Q Consensus 392 g~~~~~--~~Vsl~si~n~~GRl~~G-~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~~~~~~~l~~~~~liG~~~G~ 468 (594)
|.+..+ .+.++.++.+..+-++.. .++-.++-++ .+.+......+..+++.+....+.+.....+..--+.
T Consensus 273 ~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~------~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~~~~~~~ 346 (463)
T KOG2816|consen 273 GWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKR------LISLGLLSEFLQLLLFAFATETWMMFAAGVVVALAGI 346 (463)
T ss_pred CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh------HhhHHHHHHHHHHHHHHHhccchhhhHHHHHHHhhcc
Confidence 444432 367777888888877777 5553333322 3355555566666666666544444455555555566
Q ss_pred ccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHHhhhhc
Q 007654 469 HWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYDHEAEK 519 (594)
Q Consensus 469 ~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~~~~ 519 (594)
.+..+=++++.+=+.+..|++++++...-.+.+. ++|.+++.+|-.+-..
T Consensus 347 ~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~-~~~~~~~~i~~~t~~~ 396 (463)
T KOG2816|consen 347 VFPAIRAFASILVSPEEQGKVFGIISGIEGLSGV-VSPALYGNIFALTLDD 396 (463)
T ss_pred hhHHHHhHHHhhcccccccchhhHHHHHHHHhhh-hhHHHHHHHHHHHHHh
Confidence 7777778889999999999999999999988887 5899999999887643
No 231
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=94.35 E-value=0.0043 Score=67.64 Aligned_cols=99 Identities=25% Similarity=0.384 Sum_probs=77.9
Q ss_pred hHHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHhcc----CchhHHHHHHHHHhhhhhccchh
Q 007654 398 IFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLGMG----WPGAMYVGTLLIGLGYGAHWAIV 473 (594)
Q Consensus 398 ~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~~~----~~~~l~~~~~liG~~~G~~~~l~ 473 (594)
...+...++..+|-++.|+++||+|||+.. .+...+..++.++.... +...+.++-.+.|++.|+...+.
T Consensus 50 ~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~ 123 (451)
T PF00083_consen 50 LLTSSFFIGAIVGALIFGFLADRYGRKPAL------IISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVS 123 (451)
T ss_pred HHHHHHHhhhcccccccccccccccccccc------cccccccccccccccccccccccccccccccccccccccccccc
Confidence 367888899999999999999999997654 33344444554443332 35567788899999999999999
Q ss_pred HHHHHHhhccCchhhhhhHHHhhhhHHHH
Q 007654 474 PAAASELFGLKKFGALYNFLTLANPAGSL 502 (594)
Q Consensus 474 p~i~s~~FG~k~~g~nyg~~~~a~~~g~~ 502 (594)
|..+.|.=..|+=|..-.+...+..+|..
T Consensus 124 ~~~~~E~~~~~~R~~~~~~~~~~~~~G~~ 152 (451)
T PF00083_consen 124 PIYISEIAPPKHRGFLSSLFQLFWALGIL 152 (451)
T ss_pred ccccccccccccccccccccccccccccc
Confidence 99999999988888888888777777655
No 232
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=94.17 E-value=0.014 Score=63.84 Aligned_cols=145 Identities=14% Similarity=0.192 Sum_probs=97.6
Q ss_pred HhCCCcch--hHHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHhc-cCchhHHHHHHHHHhhh
Q 007654 390 SLGYDNTH--IFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLGM-GWPGAMYVGTLLIGLGY 466 (594)
Q Consensus 390 ~~g~~~~~--~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~~-~~~~~l~~~~~liG~~~ 466 (594)
..+.++.. ..-.++.+.-.+.-.+.|++.||.-|++-. .+...+-.++.+.-.+ ..-..+.+.=.+.|++-
T Consensus 62 ~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~------~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGe 135 (493)
T KOG1330|consen 62 YFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVI------AVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIGE 135 (493)
T ss_pred hcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEE------eeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccch
Confidence 34444432 244566777777788999999999775533 2211111111111111 22235667888899999
Q ss_pred hhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHHhhhhcccCcccccccccccccCCCCCCCCCcc
Q 007654 467 GAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYDHEAEKQHQPHHHLLNAGSIFTSMPRVDEPLKC 546 (594)
Q Consensus 467 G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C 546 (594)
.....+.|++++|.|--.+=|+-+|+.+.+.++|+. +|-...+.+-+.+.
T Consensus 136 As~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsg-lG~vvgs~va~~~~----------------------------- 185 (493)
T KOG1330|consen 136 ASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSG-LGYVVGSVVASLTF----------------------------- 185 (493)
T ss_pred hhhcccchhHhhhcCcchhhhHHHHHhhhhcccccc-eeEEeeeeeccCcc-----------------------------
Confidence 999999999999999999999999999999999987 46434333333332
Q ss_pred ccCcccHHHHHHHHHHHHHHHHHHHHHH
Q 007654 547 EGSICYFLTSMIMSGLCIVAVILSMILV 574 (594)
Q Consensus 547 ~G~~Cy~~~f~i~~~~~~~a~~ls~~l~ 574 (594)
-+|.+|.+++.+.++..++..+..
T Consensus 186 ----~Wr~af~~~avl~vi~~~L~~~f~ 209 (493)
T KOG1330|consen 186 ----WWRWAFRGSAVLGVIVGLLVFLFV 209 (493)
T ss_pred ----ceEEEEEeehHHHHHHHHHHHhhc
Confidence 278888888888887766666533
No 233
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=93.93 E-value=0.92 Score=44.29 Aligned_cols=112 Identities=21% Similarity=0.280 Sum_probs=76.8
Q ss_pred hhHHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHh--cc-CchhHHHHHHHHHhhhhhccchh
Q 007654 397 HIFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLG--MG-WPGAMYVGTLLIGLGYGAHWAIV 473 (594)
Q Consensus 397 ~~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~--~~-~~~~l~~~~~liG~~~G~~~~l~ 473 (594)
....+...+....+.+.+|.++||.+|| +........ ..++.++.. .. ....+.+...+.|++.|......
T Consensus 42 ~~~~~~~~~~~~~~~~~~g~l~d~~g~~----~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 115 (338)
T COG0477 42 GLLLSAFFLGYAIGSLLAGPLGDRYGRR----KVLIIGLLL--FLLGTLLLALAPNVGLALLLILRLLQGLGGGGLLPVA 115 (338)
T ss_pred HHHHHHHHHHHHHHhhhhhhccccccch----HHHHHHHHH--HHHHHHHHHhCccchHHHHHHHHHHHHhhhHHHHHHH
Confidence 4477888888899999999999999775 222222211 222222222 12 23345556666899999999999
Q ss_pred HHHHHHhhcc-CchhhhhhHHHh-hhhHHHHHHHHHHHHHHHHh
Q 007654 474 PAAASELFGL-KKFGALYNFLTL-ANPAGSLVFSGLIASYIYDH 515 (594)
Q Consensus 474 p~i~s~~FG~-k~~g~nyg~~~~-a~~~g~~~~~~~l~G~iyd~ 515 (594)
..+++|.+.. ++.+..++.... ...+|.. ++|.+.+.+.+.
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 158 (338)
T COG0477 116 SALLSEWFPEATERGLAVGLVTLGAGALGLA-LGPLLAGLLLGA 158 (338)
T ss_pred HHHHHHhcCchhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 9999999986 577888888777 3555655 577777777776
No 234
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=93.70 E-value=4.8 Score=45.07 Aligned_cols=143 Identities=16% Similarity=0.067 Sum_probs=87.5
Q ss_pred hcchhHHHHHHHHHHHHhcCcc---cccccccHHHHhhhCCChhhHHHHHHHHhhhh-hcccchhhhhchhhh-HHHHHH
Q 007654 11 FFNNRWLVFVAAMWIQSCAGIG---YLFGSISPVIKSSLNYNQKQIARLGVAKDLGD-SVGFLAGSLCEVLPI-WGALLV 85 (594)
Q Consensus 11 ~~~~Rw~~l~a~~~i~l~~Gt~---Y~fS~ys~~Lk~~lg~sq~~l~~i~~a~~~G~-~~gi~~G~l~D~~gp-~~~l~i 85 (594)
..+.+|..+....+.++..+.. |.=|.|.-..|-..+-+.+...++..+..+|. ++++..|....|.+. |.++.+
T Consensus 28 ~~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~ 107 (488)
T KOG2325|consen 28 ERKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIV 107 (488)
T ss_pred ccCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHH
Confidence 3456788777777666666554 33444443333346666666777544455555 568889999888875 778888
Q ss_pred HHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHhhccccchhhhhHHHH--HHHhcCCCCCceehhhHhhhhhh
Q 007654 86 GALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVS--CVQNFPKSRGPVVGILKGFAGLG 157 (594)
Q Consensus 86 G~~~~~~Gy~~~~l~~~g~i~~~s~~~l~~~~~l~g~G~~~~~taal~t--~~k~FP~~RG~~~Gl~~a~~GLS 157 (594)
|.+...+|-.++ ++++.+- +...|+|.+.-++.|.|.+. .+.+-+ +.++.|++|-++......++-+|
T Consensus 108 s~ii~~~g~llY-~~l~~~~-~~~~y~mL~~R~l~Gvg~~n--~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg 177 (488)
T KOG2325|consen 108 SFLIAIIGNLLY-LALAYVP-NGVKYLMLVARILTGVGVGN--FAVLRAYIADASTVEDRPRAFAATSGGFVLG 177 (488)
T ss_pred HHHHHHHHHHHH-HHHHhcc-cchHHHHHHHHHHcCcCccc--HHHHHHHHHhccCccchHHHHHHhhhHHHHH
Confidence 988888888764 4444443 22344444444445556553 355554 44668888877665555433333
No 235
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=93.38 E-value=0.31 Score=54.37 Aligned_cols=136 Identities=13% Similarity=0.189 Sum_probs=99.4
Q ss_pred HHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHh---ccCchhHHHHHHHHHhhhhhccchhHH
Q 007654 399 FVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLG---MGWPGAMYVGTLLIGLGYGAHWAIVPA 475 (594)
Q Consensus 399 ~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~---~~~~~~l~~~~~liG~~~G~~~~l~p~ 475 (594)
..|-+..+-.++.+-.|++.||+|.|+.. ....++.+++-++.. ......+.+.=++-|+++|..+..+..
T Consensus 78 i~ss~~~G~i~~~iP~g~l~~k~G~r~v~------~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~~pa~~~ 151 (466)
T KOG2532|consen 78 IFSSFFWGYILGQIPGGYLADKFGARRVF------FISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVLFPAIGS 151 (466)
T ss_pred HHHHHHHHHHHHHcCcHHHHHHcCchHHH------HHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHHHhhhhc
Confidence 44555566667788889999999885532 333334444433322 112225677888899999999999999
Q ss_pred HHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHHhhhhcccCcccccccccccccCCCCCCCCCccccCcccHHH
Q 007654 476 AASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYDHEAEKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLT 555 (594)
Q Consensus 476 i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~ 555 (594)
++++++-++.-++-.++++.+.-+|..+ +-.+.|.+-+... -.+.+
T Consensus 152 i~~~W~P~~Ers~~~ail~~g~q~g~v~-~mp~sg~lc~s~~---------------------------------GW~si 197 (466)
T KOG2532|consen 152 ILAKWAPPNERSTFIAILTAGSQLGTII-TMPVSGLLCESSL---------------------------------GWPSI 197 (466)
T ss_pred eeeeECCHHHHHHHHHHHHHHHHHHHHH-HHHhHHHHhccCC---------------------------------CCchH
Confidence 9999999999999999999999999885 6668998888722 38999
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 007654 556 SMIMSGLCIVAVILSMILV 574 (594)
Q Consensus 556 f~i~~~~~~~a~~ls~~l~ 574 (594)
|++.+.++++-.++-.++.
T Consensus 198 fY~~g~~g~i~~~~w~~~~ 216 (466)
T KOG2532|consen 198 FYVFGIVGLIWFILWFLFY 216 (466)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 9999888766555444433
No 236
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=92.93 E-value=1.7 Score=48.38 Aligned_cols=90 Identities=16% Similarity=0.119 Sum_probs=62.5
Q ss_pred hCCCcch--hHHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHhccC------chhHHHHHHHH
Q 007654 391 LGYDNTH--IFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLGMGW------PGAMYVGTLLI 462 (594)
Q Consensus 391 ~g~~~~~--~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~~~~------~~~l~~~~~li 462 (594)
.|+++.. ....+--+..++.=.+.|.++||..+|++-.|||++..+.....+..+++...+ ....++.-++.
T Consensus 43 ~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~vtY~l~ 122 (467)
T COG2211 43 FGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALVTYMLL 122 (467)
T ss_pred cCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHHHHHHH
Confidence 4566543 366777888999999999999999988888899998877666666655554432 12355566777
Q ss_pred Hhhhhhcc----chhHHHHHHh
Q 007654 463 GLGYGAHW----AIVPAAASEL 480 (594)
Q Consensus 463 G~~~G~~~----~l~p~i~s~~ 480 (594)
+++|-... ++.|.++.|.
T Consensus 123 ~l~YT~vniPy~al~~~iT~d~ 144 (467)
T COG2211 123 GLGYTLVNIPYGALGPEITQDP 144 (467)
T ss_pred HHHHHheeCchhhcchhhcCCH
Confidence 88887643 4445555443
No 237
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=92.61 E-value=1.9 Score=47.01 Aligned_cols=128 Identities=17% Similarity=0.071 Sum_probs=78.3
Q ss_pred HHHhCCCcc--hhHHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHHHHHHHH-------HHHHhc-----c-Cc
Q 007654 388 SQSLGYDNT--HIFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIG-------HIFLGM-----G-WP 452 (594)
Q Consensus 388 ~~~~g~~~~--~~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~-------~ll~~~-----~-~~ 452 (594)
..|++.+.. ...|++=-+... -|..+|+.||+-..-.++.|+=.+....++.+.+ .+.+.. . +.
T Consensus 7 IvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~ 85 (403)
T PF03209_consen 7 IVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPF 85 (403)
T ss_pred HHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHccccccccccc
Confidence 456776653 224444333333 4999999999876112222222222222222222 222222 0 11
Q ss_pred ----hhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHHhhh
Q 007654 453 ----GAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYDHEA 517 (594)
Q Consensus 453 ----~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~~ 517 (594)
....++..++|++.+..-+-+-++.+|.=..++=++-=++++..-.+|-+ .+..+.|.+-|...
T Consensus 86 ~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~i-v~ai~~g~lL~~~s 153 (403)
T PF03209_consen 86 WLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGII-VSAIVFGRLLDPFS 153 (403)
T ss_pred HHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHH-HHHHHHHHHccccC
Confidence 23566788889999999999999999999999988888888777666655 47778888777654
No 238
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=92.13 E-value=0.55 Score=50.28 Aligned_cols=105 Identities=23% Similarity=0.381 Sum_probs=78.5
Q ss_pred HHHHHHHHHHHHHHH--hc-cCc-------hhHHHHHHHHHhhhhhccchhHHHHHHhhccCc---hhhhhhHHHhhhhH
Q 007654 433 MAVAQFVMAIGHIFL--GM-GWP-------GAMYVGTLLIGLGYGAHWAIVPAAASELFGLKK---FGALYNFLTLANPA 499 (594)
Q Consensus 433 l~~~~~~~~~~~ll~--~~-~~~-------~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~---~g~nyg~~~~a~~~ 499 (594)
+.+..++.++|++++ .. ... ..++++-.+++++.|+.=+..+++.+|.|-.++ -..-|++.|.+.-+
T Consensus 4 I~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~ 83 (372)
T PF00854_consen 4 ILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINI 83 (372)
T ss_dssp HHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhh
Confidence 355667777787663 22 211 368999999999999999999999999998552 44567778888888
Q ss_pred HHHHHHHHHHHHHHHhhhhcccCcccccccccccccCCCCCCCCCccccCcccHHHHHHHHHHHHHHHHHHHH
Q 007654 500 GSLVFSGLIASYIYDHEAEKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTSMIMSGLCIVAVILSMI 572 (594)
Q Consensus 500 g~~~~~~~l~G~iyd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~~ 572 (594)
|+. +++.+.+++.|+. +|...|.+.++..++++++-+.
T Consensus 84 G~~-~~~~~~~~i~~~~----------------------------------~~~~~f~i~~~~~~~~~~~f~~ 121 (372)
T PF00854_consen 84 GSL-FSPTLVPYIQQNY----------------------------------GWFLGFGIPAIGMLLALIVFLS 121 (372)
T ss_dssp HHH-HHHHCCCHHHHCS-----------------------------------HHHHHHHHHHHHHHHHHHHHC
T ss_pred hhH-hhcccchhhcccc----------------------------------chhhhhhHHHHHHHHHHHHHHh
Confidence 887 4777777777644 6999999998888777665554
No 239
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=91.96 E-value=2.7 Score=45.05 Aligned_cols=146 Identities=12% Similarity=0.133 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHhhhcchhheecchHHHHHHhCCCcchh---HHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHH
Q 007654 361 ADFWLIFFSLLLGSGSGLTVIDNLGQMSQSLGYDNTHI---FVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQ 437 (594)
Q Consensus 361 ~~Fwll~~~~~~~~g~Gl~vi~n~~~i~~~~g~~~~~~---~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~ 437 (594)
++|...+.....+-...-.++ =...++.|++..++ ++.-+ ..+.+-..+.|.+.||+|||+.. .+.+
T Consensus 37 r~yl~vY~La~~aDWLQGpY~---Y~LY~~yg~~~~qIa~Lf~~Gf-~Ss~i~g~~~G~laD~~Grk~~c------l~~c 106 (354)
T PF05631_consen 37 RKYLLVYLLAMAADWLQGPYL---YALYESYGFSEHQIAILFVAGF-ASSAIFGTFVGSLADRYGRKKAC------LLFC 106 (354)
T ss_pred HHHHHHHHHHHHHHHhhcchh---HHHHHHcCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcCchHHH------HHHH
Confidence 556555554444322221222 23445567765543 22222 22344456778899999996642 2334
Q ss_pred HHHHHHHHHHhccCchhHHHHHHHHHhhhhhccchhHHHHHHhhccCc-----hhhhhhHHH-hhhhHHHHHHHHHHHHH
Q 007654 438 FVMAIGHIFLGMGWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKK-----FGALYNFLT-LANPAGSLVFSGLIASY 511 (594)
Q Consensus 438 ~~~~~~~ll~~~~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~-----~g~nyg~~~-~a~~~g~~~~~~~l~G~ 511 (594)
++-.++++.-...+...++++-++-|++.--.++.+=+-.-.-...+. .+..++.+. ..+.+-++ .+..++-.
T Consensus 107 ily~~scl~k~~~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI-~aGv~a~~ 185 (354)
T PF05631_consen 107 ILYSLSCLTKHSSNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAI-GAGVVANV 185 (354)
T ss_pred HHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHH-HHhHHHHH
Confidence 445555555555666689999999999999888877664432233344 455555554 44544344 24444444
Q ss_pred HHHhhh
Q 007654 512 IYDHEA 517 (594)
Q Consensus 512 iyd~~~ 517 (594)
.-|..+
T Consensus 186 l~~~~~ 191 (354)
T PF05631_consen 186 LADWFG 191 (354)
T ss_pred HHHHhC
Confidence 445443
No 240
>PRK03612 spermidine synthase; Provisional
Probab=91.55 E-value=3.2 Score=47.05 Aligned_cols=58 Identities=24% Similarity=0.315 Sum_probs=38.8
Q ss_pred HHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHH
Q 007654 455 MYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYD 514 (594)
Q Consensus 455 l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd 514 (594)
++...++.++..|+.+.+.--+..+.- .++.|.+-|-++.+..+|+. +|.++.|.+.=
T Consensus 113 ~~~~~~~~~~l~G~~~Pl~~~~~~~~~-~~~~g~~~g~ly~~ntlGa~-~G~l~~~~vLl 170 (521)
T PRK03612 113 LYVLVLLIGLLIGMEIPLLMRILQRIR-DQHLGHNVATVLAADYLGAL-VGGLAFPFLLL 170 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcc-ccchhhhhhhhHhHHhHHHH-HHHHHHHHHHH
Confidence 344556778889988766666655532 24567777777777777777 47777776654
No 241
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=91.50 E-value=2.8 Score=45.61 Aligned_cols=103 Identities=14% Similarity=0.108 Sum_probs=80.2
Q ss_pred hhhhhcccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHhc----cCchhHHHHHHHHHhhhhhccchhHHHHHHhh
Q 007654 406 WNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLGM----GWPGAMYVGTLLIGLGYGAHWAIVPAAASELF 481 (594)
Q Consensus 406 ~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~~----~~~~~l~~~~~liG~~~G~~~~l~p~i~s~~F 481 (594)
+=+.+-+-.|++-+|+++|+++ .+...++++++.++.. .....+..+..++|.+-|..=...=+.++...
T Consensus 60 gYf~~~lpa~~~~kk~gyk~gi------~lgL~l~avg~~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg 133 (422)
T COG0738 60 GYFIMSLPAGLLIKKLGYKAGI------VLGLLLYAVGAALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLG 133 (422)
T ss_pred HHHHHhccHHHHHHHhhhHHHH------HHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhC
Confidence 3455667788888888886653 6667778888877642 22335666677888898888888888888998
Q ss_pred ccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHHh
Q 007654 482 GLKKFGALYNFLTLANPAGSLVFSGLIASYIYDH 515 (594)
Q Consensus 482 G~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~ 515 (594)
-.++-...-+++...+++|+.+ +|.+.+++-++
T Consensus 134 ~~~~a~~rlnl~q~fn~lGa~~-gp~~g~~lils 166 (422)
T COG0738 134 KPESAAFRLNLAQAFNGLGAIL-GPLLGSSLILS 166 (422)
T ss_pred CchhHHHHHHHHHHhhhhHHHH-HHHHHHHHHHh
Confidence 8888999999999999999995 99999999985
No 242
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=90.56 E-value=0.61 Score=49.86 Aligned_cols=86 Identities=19% Similarity=0.118 Sum_probs=65.1
Q ss_pred cccccccccHHHHhhhCCChhhHHHHHHHHhhhh-hcccchhhhhchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCChh
Q 007654 31 IGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGD-SVGFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLP 109 (594)
Q Consensus 31 t~Y~fS~ys~~Lk~~lg~sq~~l~~i~~a~~~G~-~~gi~~G~l~D~~gp~~~l~iG~~~~~~Gy~~~~l~~~g~i~~~s 109 (594)
..|.|.+| +++|++..|++.+=+++...+ .+|.+.|.+.||+|+|-.+++-+++..+...+ .+.+ .
T Consensus 54 GpY~Y~LY-----~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~------k~~~--~ 120 (354)
T PF05631_consen 54 GPYLYALY-----ESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLT------KHSS--N 120 (354)
T ss_pred cchhHHHH-----HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHH------Hhcc--c
Confidence 45888777 369999999999765665555 56999999999999999999888887666653 3332 4
Q ss_pred HHHHHHHHHhhccccchhhh
Q 007654 110 LWAMCILIFVGNNGETYFNT 129 (594)
Q Consensus 110 ~~~l~~~~~l~g~G~~~~~t 129 (594)
++.+.+--+++|.+.+..++
T Consensus 121 ~~~L~~GRvlgGiaTSLLfS 140 (354)
T PF05631_consen 121 YPVLLLGRVLGGIATSLLFS 140 (354)
T ss_pred cHHHHHHHHHHHHHHHHHHH
Confidence 67767677888887775544
No 243
>PRK11462 putative transporter; Provisional
Probab=90.52 E-value=4.1 Score=45.12 Aligned_cols=50 Identities=10% Similarity=0.050 Sum_probs=37.3
Q ss_pred HhCCCcch--hHHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHHHH
Q 007654 390 SLGYDNTH--IFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFV 439 (594)
Q Consensus 390 ~~g~~~~~--~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~ 439 (594)
..|.++.. ....+--++.++-=++.|++|||...|++-.|||.+.....+
T Consensus 39 ~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~ 90 (460)
T PRK11462 39 IFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPF 90 (460)
T ss_pred hhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHH
Confidence 35776653 366778888999999999999998777777788886644333
No 244
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=90.28 E-value=0.88 Score=50.72 Aligned_cols=119 Identities=23% Similarity=0.293 Sum_probs=83.7
Q ss_pred HHhhhCCChhhHHH-HHHHHhhhhhcccchh-hhhchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHh
Q 007654 42 IKSSLNYNQKQIAR-LGVAKDLGDSVGFLAG-SLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFV 119 (594)
Q Consensus 42 Lk~~lg~sq~~l~~-i~~a~~~G~~~gi~~G-~l~D~~gp~~~l~iG~~~~~~Gy~~~~l~~~g~i~~~s~~~l~~~~~l 119 (594)
+|.+++|++++.+. .+.+..++.....+.. .+.-..|-+.++.+|.+....+..++... - ..|+++...++
T Consensus 268 l~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~--~-----~~w~~~~~~v~ 340 (463)
T KOG2816|consen 268 LKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFA--T-----ETWMMFAAGVV 340 (463)
T ss_pred EeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHh--c-----cchhhhHHHHH
Confidence 78899999999996 4666666664444433 66666777778999999887777765322 1 35777766665
Q ss_pred hccccchhhhhHHHHHHHh-cCCCCCceehhhHhhhhhhHHHHHHHHHHh
Q 007654 120 GNNGETYFNTAALVSCVQN-FPKSRGPVVGILKGFAGLGGAILTQVYTMI 168 (594)
Q Consensus 120 ~g~G~~~~~taal~t~~k~-FP~~RG~~~Gl~~a~~GLSa~i~s~i~~~~ 168 (594)
.+.+ +...++--.-..|+ .|+++|++-++....-+|++.+.+.+|..+
T Consensus 341 ~~~~-~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i 389 (463)
T KOG2816|consen 341 VALA-GIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNI 389 (463)
T ss_pred HHhh-cchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHH
Confidence 5533 23333433334444 589999999999999999998888888655
No 245
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=89.27 E-value=1.8 Score=45.21 Aligned_cols=154 Identities=12% Similarity=0.177 Sum_probs=88.7
Q ss_pred hhhhcchhHHHHHHHHHHHHhcCcccccccccHHHHhhhCCChhhHHHH-HHHHhhhhhcccchhhhhchhhhHHHH-HH
Q 007654 8 FVSFFNNRWLVFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKQIARL-GVAKDLGDSVGFLAGSLCEVLPIWGAL-LV 85 (594)
Q Consensus 8 ~~~~~~~Rw~~l~a~~~i~l~~Gt~Y~fS~ys~~Lk~~lg~sq~~l~~i-~~a~~~G~~~gi~~G~l~D~~gp~~~l-~i 85 (594)
|+..+..-|.....+++--.+-=..|+ +=.--.++|+|+|..+.+.| ++.-.+........|.+.||+|..... +.
T Consensus 259 v~~f~ppfw~~~iicv~yyva~fPFi~--lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~ 336 (459)
T KOG4686|consen 259 VNTFYPPFWVLVIICVLYYVAWFPFIT--LGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVAS 336 (459)
T ss_pred ccccCccHHHHHHHHHHHHHHHHHHhh--hhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHH
Confidence 445555667766666554433222221 11233688999999888886 777777777788899999999995443 33
Q ss_pred HHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHhhccccchhhhhHHHHHHHhc-CCC-CCceehhhHhhhhhhHHHHHH
Q 007654 86 GALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNF-PKS-RGPVVGILKGFAGLGGAILTQ 163 (594)
Q Consensus 86 G~~~~~~Gy~~~~l~~~g~i~~~s~~~l~~~~~l~g~G~~~~~taal~t~~k~F-P~~-RG~~~Gl~~a~~GLSa~i~s~ 163 (594)
+.++...|-.++ +++-.. |+.-+++. |.+-+ ...|++=.|+..- |++ -|++-|...+-.-|+=++.+-
T Consensus 337 a~~~tl~~H~~l--~Ft~ls---Py~~m~~l----GLsys-llAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~I 406 (459)
T KOG4686|consen 337 ACILTLLGHSGL--FFTFLS---PYTSMTFL----GLSYS-LLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPI 406 (459)
T ss_pred HHHHHHHHhhhH--Hhhhcc---HHHHHHHH----hhhHH-HHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhh
Confidence 444444555543 333321 33333422 22111 1123344455443 865 699999888888887666655
Q ss_pred HHHHhcCCCh
Q 007654 164 VYTMIHAPDH 173 (594)
Q Consensus 164 i~~~~f~~~~ 173 (594)
|..-+-.+|.
T Consensus 407 iag~i~d~~g 416 (459)
T KOG4686|consen 407 IAGFIADGDG 416 (459)
T ss_pred hhheeecCCC
Confidence 5443333343
No 246
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=89.08 E-value=1.5 Score=41.59 Aligned_cols=86 Identities=14% Similarity=0.018 Sum_probs=61.2
Q ss_pred hcccchhhhhchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHhhccccchhhhhHHHHHHHhcC-CCC
Q 007654 65 SVGFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSR 143 (594)
Q Consensus 65 ~~gi~~G~l~D~~gp~~~l~iG~~~~~~Gy~~~~l~~~g~i~~~s~~~l~~~~~l~g~G~~~~~taal~t~~k~FP-~~R 143 (594)
...++...+.++.|||+++++|.+. |..+-+++- - ++.|.+....++.|.|.+...++--....++-. ++|
T Consensus 52 ~s~l~~P~iv~~lg~K~sm~lg~~~----y~~y~~~~~--~--~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~~ 123 (156)
T PF05978_consen 52 ISCLFAPSIVNKLGPKWSMILGSLG----YAIYIASFF--Y--PNSYTLYPASALLGFGAALLWTAQGTYLTSYSTEETI 123 (156)
T ss_pred HHHHhHHHHHHHHhhHHHHHHHHHH----HHHHHHHHH--h--hhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHHH
Confidence 3456677889999999999999984 444333321 1 235666677888889999888887766667664 458
Q ss_pred CceehhhHhhhhhhH
Q 007654 144 GPVVGILKGFAGLGG 158 (594)
Q Consensus 144 G~~~Gl~~a~~GLSa 158 (594)
++-.|+-.+.+-.|.
T Consensus 124 ~~~~~ifw~i~~~s~ 138 (156)
T PF05978_consen 124 GRNTGIFWAIFQSSL 138 (156)
T ss_pred hhHHHHHHHHHHHHH
Confidence 988888877777653
No 247
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=87.72 E-value=3.8 Score=45.56 Aligned_cols=155 Identities=15% Similarity=0.288 Sum_probs=111.2
Q ss_pred hhhhcchhHHHHHHHHHHHHhcCcccccccccHHHHhh--hCCChhhHHHH-HHHHhhhhhc-ccchhhhhc---hhhhH
Q 007654 8 FVSFFNNRWLVFVAAMWIQSCAGIGYLFGSISPVIKSS--LNYNQKQIARL-GVAKDLGDSV-GFLAGSLCE---VLPIW 80 (594)
Q Consensus 8 ~~~~~~~Rw~~l~a~~~i~l~~Gt~Y~fS~ys~~Lk~~--lg~sq~~l~~i-~~a~~~G~~~-gi~~G~l~D---~~gp~ 80 (594)
+.+..+++++.++.=.+.-...-+.|=.++|-..+.-. .+.+...+-.+ ++...+|... |++.+.+-+ ++|.+
T Consensus 233 ~~~l~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~ 312 (461)
T KOG3098|consen 233 TFKLLKTPKMLLLFPFFFYTGLETSFWISIYPTCISFTRKLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRK 312 (461)
T ss_pred HHHHhcCHhHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccC
Confidence 33444555665555555555566777788998888765 44444444444 6666677755 666666654 45778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCC-----------hhHHHHHHHHHhhccccchhhhhHHHHHHHhcCCCCCceehh
Q 007654 81 GALLVGALQNFIGYGWVWLIVTGRAPV-----------LPLWAMCILIFVGNNGETYFNTAALVSCVQNFPKSRGPVVGI 149 (594)
Q Consensus 81 ~~l~iG~~~~~~Gy~~~~l~~~g~i~~-----------~s~~~l~~~~~l~g~G~~~~~taal~t~~k~FP~~RG~~~Gl 149 (594)
.+..+|.+.+..++.+..+.+-...|- +++....+.+++.|.|.++.++...+.+..-+|++|-.+-.+
T Consensus 313 ~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~~~~~~~~fsi 392 (461)
T KOG3098|consen 313 PTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLYPDDRAQAFSL 392 (461)
T ss_pred cchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCchHHHHHH
Confidence 899999999999999888777665531 123233356677788999999999999999999999999999
Q ss_pred hHhhhhhhHHHHH
Q 007654 150 LKGFAGLGGAILT 162 (594)
Q Consensus 150 ~~a~~GLSa~i~s 162 (594)
.|-+.++.+.+..
T Consensus 393 ~kfyq~~~s~v~~ 405 (461)
T KOG3098|consen 393 FKFYQSVASCVAF 405 (461)
T ss_pred HHHHHHHHHHHHh
Confidence 9999888886643
No 248
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=87.67 E-value=13 Score=38.04 Aligned_cols=130 Identities=18% Similarity=0.277 Sum_probs=67.9
Q ss_pred HHHHhhhcchhheecc--hHHHHHHhCCCcchh-HH-HHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHHHHHHHH
Q 007654 368 FSLLLGSGSGLTVIDN--LGQMSQSLGYDNTHI-FV-SMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIG 443 (594)
Q Consensus 368 ~~~~~~~g~Gl~vi~n--~~~i~~~~g~~~~~~-~V-sl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~ 443 (594)
..+.+...+|..+... ..++-+.+|++.++. .+ ..-.++..+| +.+|.+.|+.+. + ..+.+..+...+|
T Consensus 7 a~~~v~~~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp-----~-~~l~iG~~~~~~G 79 (250)
T PF06813_consen 7 ASIWVQLCSGTTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGP-----W-VVLLIGAVLGFVG 79 (250)
T ss_pred HHHHHHHhcCcccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcch-----H-HHHHHHHHHHHHH
Confidence 3444445566555532 334445578886543 33 3344555666 888999997753 2 2335556666667
Q ss_pred HHHH--hc-cC-c-hhHHHHHHHHHhh-hhhccchhH--HHHHHhhccCchhhhhhHHHhhhhHHHHHHH
Q 007654 444 HIFL--GM-GW-P-GAMYVGTLLIGLG-YGAHWAIVP--AAASELFGLKKFGALYNFLTLANPAGSLVFS 505 (594)
Q Consensus 444 ~ll~--~~-~~-~-~~l~~~~~liG~~-~G~~~~l~p--~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~ 505 (594)
+.++ .. +. + ..++...+...++ .|..|--.. ....+.| ++|=|+.=|++-...++++.+++
T Consensus 80 Y~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NF-P~~RG~vvgilk~~~GLSaai~t 148 (250)
T PF06813_consen 80 YGLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNF-PRSRGTVVGILKGFFGLSAAIFT 148 (250)
T ss_pred HHHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhC-ccccCceehhhhHHHHhHHHHHH
Confidence 6443 21 11 1 1122222222222 233332222 3334777 46778888887777777666554
No 249
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=85.97 E-value=3.7 Score=39.95 Aligned_cols=111 Identities=23% Similarity=0.232 Sum_probs=67.2
Q ss_pred ccHHHHhhhCCCh--hhHHHHHHHHhhhhhc-ccchhhhhchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHH
Q 007654 38 ISPVIKSSLNYNQ--KQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMC 114 (594)
Q Consensus 38 ys~~Lk~~lg~sq--~~l~~i~~a~~~G~~~-gi~~G~l~D~~gp~~~l~iG~~~~~~Gy~~~~l~~~g~i~~~s~~~l~ 114 (594)
..+.+...++.+. .+...+.....++... .++.|.+.|++|+|....++......+..... +... .+.+.+.
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~~~ 98 (338)
T COG0477 24 ALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLA--LAPN---VGLALLL 98 (338)
T ss_pred HHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHH--hCcc---chHHHHH
Confidence 3444445555554 3555555555555544 37999999999988666666654334422221 1121 1345555
Q ss_pred HHHHhhccccchhhhhHHHHHHHhcCC--CCCceehhhHhh
Q 007654 115 ILIFVGNNGETYFNTAALVSCVQNFPK--SRGPVVGILKGF 153 (594)
Q Consensus 115 ~~~~l~g~G~~~~~taal~t~~k~FP~--~RG~~~Gl~~a~ 153 (594)
..-.+.|.+.+..+........+++|+ +|+...++....
T Consensus 99 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (338)
T COG0477 99 ILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLG 139 (338)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHH
Confidence 444446667777777778888888996 677777766653
No 250
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=85.79 E-value=65 Score=36.02 Aligned_cols=87 Identities=13% Similarity=-0.098 Sum_probs=60.7
Q ss_pred hhhcccchhhhhchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHhhccccchhhhhHHHHHHHhcCC-
Q 007654 63 GDSVGFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPK- 141 (594)
Q Consensus 63 G~~~gi~~G~l~D~~gp~~~l~iG~~~~~~Gy~~~~l~~~g~i~~~s~~~l~~~~~l~g~G~~~~~taal~t~~k~FP~- 141 (594)
...+.++++-++|+.+||+.+.+|+.....=...++ . ++-|.++.-..+.|.|.+..+++-=.-...|..+
T Consensus 63 ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl----~----~N~y~~yfssallG~Gaallw~GqG~ylt~~st~~ 134 (461)
T KOG3098|consen 63 FTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFL----F----PNSYYLYFSSALLGFGAALLWTGQGGYLTSNSTRE 134 (461)
T ss_pred HHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHH----h----cchHHHHHHHHHhhhhHHheecccceehhhcCChh
Confidence 334567889999999999999999986533333221 1 1334556667777888888777777777888864
Q ss_pred CCCceehhhHhhhhhh
Q 007654 142 SRGPVVGILKGFAGLG 157 (594)
Q Consensus 142 ~RG~~~Gl~~a~~GLS 157 (594)
++.+-+++.-+.+=.|
T Consensus 135 tie~Nisi~Wai~~~~ 150 (461)
T KOG3098|consen 135 TIERNISIFWAIGQSS 150 (461)
T ss_pred hHHHHHHHHHHHHHHH
Confidence 5788888876664444
No 251
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=84.98 E-value=6.3 Score=37.34 Aligned_cols=103 Identities=11% Similarity=0.073 Sum_probs=65.2
Q ss_pred HHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHhhhhhccchhHHHHHH
Q 007654 400 VSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLGMGWPGAMYVGTLLIGLGYGAHWAIVPAAASE 479 (594)
Q Consensus 400 Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~~~~~~~l~~~~~liG~~~G~~~~l~p~i~s~ 479 (594)
.++.-...++.-++...+.++++.|+. +++..+.-.+=...+.......++.++++.|++.+-.|.--...+.+
T Consensus 43 lai~Y~~~~~s~l~~P~iv~~lg~K~s------m~lg~~~y~~y~~~~~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~ 116 (156)
T PF05978_consen 43 LAILYGSFAISCLFAPSIVNKLGPKWS------MILGSLGYAIYIASFFYPNSYTLYPASALLGFGAALLWTAQGTYLTS 116 (156)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHhhHHH------HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHH
Confidence 333334444444566777778876432 34333333322222333445678999999999999999999999998
Q ss_pred hhccCchhhhhhHHHhhhhHHHHHHHHHHH
Q 007654 480 LFGLKKFGALYNFLTLANPAGSLVFSGLIA 509 (594)
Q Consensus 480 ~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~ 509 (594)
.-=.++-++|.|+...-.-.+.+ +|..+.
T Consensus 117 ~s~~~~~~~~~~ifw~i~~~s~i-~G~~~~ 145 (156)
T PF05978_consen 117 YSTEETIGRNTGIFWAIFQSSLI-FGNLFL 145 (156)
T ss_pred cCCHHHHhhHHHHHHHHHHHHHH-HHHHHH
Confidence 88778888888876655544433 354333
No 252
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=80.72 E-value=17 Score=40.01 Aligned_cols=154 Identities=19% Similarity=0.249 Sum_probs=79.9
Q ss_pred HHHH-HhCCCcchh--HHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHhc--c---CchhHHH
Q 007654 386 QMSQ-SLGYDNTHI--FVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLGM--G---WPGAMYV 457 (594)
Q Consensus 386 ~i~~-~~g~~~~~~--~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~~~~~~~~ll~~~--~---~~~~l~~ 457 (594)
++.+ ++|.++++. +.++.++ =-.-..++|.+||-+-- .+..|...+.+..++..++.+.+.. . ......+
T Consensus 14 ~~l~~~l~ls~~~~~~~~~~~~l-Pw~~Kp~~g~lsD~~pi-~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~ 91 (433)
T PF03092_consen 14 PFLKDDLGLSPAQLQRLSSLASL-PWSIKPLYGLLSDSFPI-FGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVV 91 (433)
T ss_pred HHHHHHcCCCHHHHHHHHHHHhC-chHHhhhHHhhcccccc-cCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHH
Confidence 3444 478887643 2233322 22457899999998731 1222223334444444333322221 1 1222333
Q ss_pred HHHHHHhhhhhccchhHHHHHHhhc--cCchhhhhhHHHhhhhHHHHHHHHHHHHHHHHhhhhcccCccccccccccccc
Q 007654 458 GTLLIGLGYGAHWAIVPAAASELFG--LKKFGALYNFLTLANPAGSLVFSGLIASYIYDHEAEKQHQPHHHLLNAGSIFT 535 (594)
Q Consensus 458 ~~~liG~~~G~~~~l~p~i~s~~FG--~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~~~~~~~~~~~~~~~~~~~~ 535 (594)
...+.-+++-..--+.=+++.|.=- ++.-|.+-...+..-.+|++ ++..+.|...|+.+
T Consensus 92 ~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~l-v~~~l~G~l~~~~~------------------ 152 (433)
T PF03092_consen 92 LLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSL-VGSLLSGPLLDSFG------------------ 152 (433)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHH-HHHHhhhhhhhcCC------------------
Confidence 4444445554444444455555531 11134445555556666666 36677788888654
Q ss_pred CCCCCCCCCccccCcccHHHHHHHHHHHHHHHHHHHHHHhh
Q 007654 536 SMPRVDEPLKCEGSICYFLTSMIMSGLCIVAVILSMILVHR 576 (594)
Q Consensus 536 ~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~~l~~r 576 (594)
++..|.+++.+..+.++.++.+...
T Consensus 153 ----------------~~~~f~i~~~~~~l~~~~~~~~~~e 177 (433)
T PF03092_consen 153 ----------------PQGVFLISAALPLLMLIVALFLLEE 177 (433)
T ss_pred ----------------CeEEehHHHHHHHHHHHHHHHhhhh
Confidence 4555677777777776666665553
No 253
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=79.02 E-value=5.9 Score=46.21 Aligned_cols=59 Identities=8% Similarity=0.079 Sum_probs=49.4
Q ss_pred HHHhhhCCChhhHHHH-HHHHhhhhhcccchhhhhchh-hhHHHHHHHHHHHHHHHHHHHH
Q 007654 41 VIKSSLNYNQKQIARL-GVAKDLGDSVGFLAGSLCEVL-PIWGALLVGALQNFIGYGWVWL 99 (594)
Q Consensus 41 ~Lk~~lg~sq~~l~~i-~~a~~~G~~~gi~~G~l~D~~-gp~~~l~iG~~~~~~Gy~~~~l 99 (594)
-+.+.+|+++++.+.+ +....+...+++++|.+.|++ |++.++++|.++..+|+.++.+
T Consensus 13 Yl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai 73 (654)
T TIGR00926 13 YFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSF 73 (654)
T ss_pred HHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHh
Confidence 3667799999988885 666666667799999999998 9999999999999999987653
No 254
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=71.99 E-value=3.1 Score=39.28 Aligned_cols=43 Identities=26% Similarity=0.419 Sum_probs=30.2
Q ss_pred hHHHHHHHHHhhhhhccchh-HHHHHHhhccCchhhhhhHHHhh
Q 007654 454 AMYVGTLLIGLGYGAHWAIV-PAAASELFGLKKFGALYNFLTLA 496 (594)
Q Consensus 454 ~l~~~~~liG~~~G~~~~l~-p~i~s~~FG~k~~g~nyg~~~~a 496 (594)
.+.++..++|++||..=+-- |---..++|.+++-.||+-+.-+
T Consensus 104 ~~~Fg~gllGisYGilSaSWD~~r~GSllG~~e~~~N~~r~~~a 147 (153)
T PF11947_consen 104 LVFFGLGLLGISYGILSASWDPEREGSLLGWEEFKRNWGRMWEA 147 (153)
T ss_pred HHHHHHHHHhhhhhhcccccCCCCCCCcccHHHHHHhHHHHHHH
Confidence 35567788899998753332 22356678999999999887654
No 255
>PF12832 MFS_1_like: MFS_1 like family
Probab=68.17 E-value=5.6 Score=32.90 Aligned_cols=43 Identities=16% Similarity=0.272 Sum_probs=34.6
Q ss_pred hHHHHHHhCCCcchh--HHHHHHHhhhhhcccccchhhhhhhccC
Q 007654 384 LGQMSQSLGYDNTHI--FVSMISIWNFLGRVGGGYFSEIIVRDYA 426 (594)
Q Consensus 384 ~~~i~~~~g~~~~~~--~Vsl~si~n~~GRl~~G~lsD~l~r~~~ 426 (594)
..-..+++|+++.++ ..++.-+...++..++|++.||.+|++.
T Consensus 23 l~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~ 67 (77)
T PF12832_consen 23 LPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKV 67 (77)
T ss_pred hhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHH
Confidence 344556789988754 7788899999999999999999988553
No 256
>PF12832 MFS_1_like: MFS_1 like family
Probab=64.88 E-value=9.8 Score=31.46 Aligned_cols=47 Identities=26% Similarity=0.263 Sum_probs=34.4
Q ss_pred HHhhhCCChhhHHHHHHHHhhhh-hcccchhhhhchhhhHHHHHHHHHH
Q 007654 42 IKSSLNYNQKQIARLGVAKDLGD-SVGFLAGSLCEVLPIWGALLVGALQ 89 (594)
Q Consensus 42 Lk~~lg~sq~~l~~i~~a~~~G~-~~gi~~G~l~D~~gp~~~l~iG~~~ 89 (594)
+| +.|+|..|+..+.....+-. ...++.|.+.||++.+-..+.++..
T Consensus 27 ~~-~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 27 LK-QLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred hh-hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHH
Confidence 44 59999999999744444444 4577899999999986665555543
No 257
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=63.22 E-value=20 Score=39.13 Aligned_cols=89 Identities=19% Similarity=0.242 Sum_probs=54.8
Q ss_pred cchhhhhchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHH-HHh-hccccchhhhhHHHHHHHhcCCC-CC
Q 007654 68 FLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCIL-IFV-GNNGETYFNTAALVSCVQNFPKS-RG 144 (594)
Q Consensus 68 i~~G~l~D~~gp~~~l~iG~~~~~~Gy~~~~l~~~g~i~~~s~~~l~~~-~~l-~g~G~~~~~taal~t~~k~FP~~-RG 144 (594)
++.|.+.||+|+|.++..--+++ |..++-+. +.+-+..-..+++.+ .++ ++++..+.|| -.-||.+ |+
T Consensus 399 LIt~~iverlGRKkTMal~l~~f--~iflfll~-~c~~rn~~tvllf~arafisg~fqvaYvYt------PEVyPTavRa 469 (528)
T KOG0253|consen 399 LITGVIVERLGRKKTMALSLILF--GIFLFLLT-TCKTRNAYTVLLFTARAFISGAFQVAYVYT------PEVYPTAVRA 469 (528)
T ss_pred hHHHHHHHHhcchhHHHHHHHHH--HHHHHHHH-HhcCcchhHHHHHHHHHHHhchheEEEEec------Ccccchhhhh
Confidence 46899999999999987766654 44333222 222221112233432 223 4556666666 4668865 99
Q ss_pred ceehhhHhhhhhhHHHHHHHH
Q 007654 145 PVVGILKGFAGLGGAILTQVY 165 (594)
Q Consensus 145 ~~~Gl~~a~~GLSa~i~s~i~ 165 (594)
+.+|.-.+.-=.++.+-+.|.
T Consensus 470 tgvGtcSsmaRIggI~~p~iA 490 (528)
T KOG0253|consen 470 TGVGTCSSMARIGGIFSPVIA 490 (528)
T ss_pred cchhhhhhHHhhhhhhhhHHH
Confidence 999999888888875444444
No 258
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=53.34 E-value=39 Score=28.68 Aligned_cols=65 Identities=22% Similarity=0.228 Sum_probs=48.2
Q ss_pred cccccccHHHHhhhCCChhhHHHHHHHHhhhhhccc-chhhhhchhhhHHHHHHHHHHHHHHHHHH
Q 007654 33 YLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSVGF-LAGSLCEVLPIWGALLVGALQNFIGYGWV 97 (594)
Q Consensus 33 Y~fS~ys~~Lk~~lg~sq~~l~~i~~a~~~G~~~gi-~~G~l~D~~gp~~~l~iG~~~~~~Gy~~~ 97 (594)
++|.-.=|.++++.++|.+|...++++.-+|=..|- ...++-++..++..+.+|.+...+....+
T Consensus 9 FayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~m 74 (85)
T PF06779_consen 9 FAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAM 74 (85)
T ss_pred HHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 567777899999999999999999999888876654 45555666566667777776655544443
No 259
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=48.21 E-value=28 Score=39.64 Aligned_cols=182 Identities=15% Similarity=0.138 Sum_probs=96.2
Q ss_pred HHhhcHHHHHHHHHHHhhhcchhheecchHHHH-HHhCCCcchhHHHHHHHhhhhhcccccchhhhhhhccCCchhHHHH
Q 007654 356 QALIKADFWLIFFSLLLGSGSGLTVIDNLGQMS-QSLGYDNTHIFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMA 434 (594)
Q Consensus 356 e~l~t~~Fwll~~~~~~~~g~Gl~vi~n~~~i~-~~~g~~~~~~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~ 434 (594)
+++.+++.-++ +......|.|...+-|.-.+- |+.+..+ ..-++.++-|-.|-|..=++|=|+.++.+-.| ++.
T Consensus 366 ~~~~s~~~llf-f~~av~mG~g~~lv~tFLfWHled~~~~~--~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~--v~~ 440 (618)
T KOG3762|consen 366 KVFASPHILLF-FFVAVVMGAGVGLVFTFLFWHLEDLGGIK--TLFGVVSALCHAGEILFYFFSFKLIEKIGHVN--VMY 440 (618)
T ss_pred HHhcCCCEEeh-hHHHHHHHHHHHHHHHHHHHHHhhcCCcc--eeeeehhhhhccchHHHHHHHHHHHHHhcccc--eee
Confidence 45556554442 223333444444444433433 4444222 23334555555666555444444444333222 223
Q ss_pred HHHHHHHHHHHHHhcc-CchhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhh-hhHHHHHHHHHHHHHH
Q 007654 435 VAQFVMAIGHIFLGMG-WPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLA-NPAGSLVFSGLIASYI 512 (594)
Q Consensus 435 ~~~~~~~~~~ll~~~~-~~~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a-~~~g~~~~~~~l~G~i 512 (594)
+.+++..+=.+.+... +++....-=++=|.+++..|...-+.++..=-++-=.+--|++-.. .++|-- +|.+++|.+
T Consensus 441 lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g-~GslIGG~~ 519 (618)
T KOG3762|consen 441 LGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKG-LGSLIGGFV 519 (618)
T ss_pred ehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcc-hhhhhhhhh
Confidence 3333333333333333 3433333446679999999999999999887665545555544321 233332 355666777
Q ss_pred HHhhhhcccCcccccccccccccCCCCCCCCCccccCcccHHHHHHHHHHHHHHHHHHHHHHhhh
Q 007654 513 YDHEAEKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFLTSMIMSGLCIVAVILSMILVHRT 577 (594)
Q Consensus 513 yd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~~l~~r~ 577 (594)
..+.+ -+.+|.+.+..|++.+++-+.+.++.
T Consensus 520 v~~fg----------------------------------~~ttf~~~giAcl~~l~~~~~iq~~l 550 (618)
T KOG3762|consen 520 VERFG----------------------------------ARTTFRIFGIACLVTLALFISIQLLL 550 (618)
T ss_pred heeeh----------------------------------hHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 76665 36777777777777776666555443
No 260
>COG4603 ABC-type uncharacterized transport system, permease component [General function prediction only]
Probab=46.14 E-value=1.5e+02 Score=32.07 Aligned_cols=108 Identities=20% Similarity=0.249 Sum_probs=63.8
Q ss_pred hHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHHhhhh--cccCccccccccc
Q 007654 454 AMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYDHEAE--KQHQPHHHLLNAG 531 (594)
Q Consensus 454 ~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~~~--~~~~~~~~~~~~~ 531 (594)
......++.|...|+.|+..|.+..-+||... .=.-+++.+ +..++.+-++-|..+|.++. .|...
T Consensus 113 l~~p~a~l~g~~~G~~wa~ipg~Lka~f~~nE---VIttiMlNy-Ia~~l~~~lV~~~~~~p~~~~~~~T~~-------- 180 (356)
T COG4603 113 LALPLALLAGAAGGGLWALIPGLLKARFGVNE---VITTIMLNY-IAVYLLNYLVEGPLRDPAGTNFPQTRP-------- 180 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCccH---HHHHHHHHH-HHHHHHHHHHcCcccCCCcCCCccCcc--------
Confidence 44557778899999999999999999998654 222233333 22333344455566665552 22110
Q ss_pred ccccCCCCCCCCCccccCcccHH-HHHHHHHHHHHHHHHHHHHHhhhhhhhh
Q 007654 532 SIFTSMPRVDEPLKCEGSICYFL-TSMIMSGLCIVAVILSMILVHRTTNVYS 582 (594)
Q Consensus 532 ~~~~~~~~~~~~~~C~G~~Cy~~-~f~i~~~~~~~a~~ls~~l~~r~r~~~~ 582 (594)
-++. .=..+.-.+. .+.....+.++++++..++.+||+.-|+
T Consensus 181 -------i~~~--a~lp~~~~~~~~~~~g~lial~~av~~~~ll~kT~~G~~ 223 (356)
T COG4603 181 -------IPDA--ARLPSLFLASGRLHWGFLLALAAAVLVWFLLKKTVFGYE 223 (356)
T ss_pred -------Cchh--hcCCccccccchHHHHHHHHHHHHHHHHHHHHHccCCeE
Confidence 0000 0001111111 5666666777788888999999987666
No 261
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=44.90 E-value=1e+02 Score=34.77 Aligned_cols=112 Identities=17% Similarity=0.167 Sum_probs=70.1
Q ss_pred HHHHHHHHHHhhhcchhheecchHHHHHHh--CCCcc--hhHHHHHHHhhhhhcccccchhhhhhhccCCchhHHHHHHH
Q 007654 362 DFWLIFFSLLLGSGSGLTVIDNLGQMSQSL--GYDNT--HIFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQ 437 (594)
Q Consensus 362 ~Fwll~~~~~~~~g~Gl~vi~n~~~i~~~~--g~~~~--~~~Vsl~si~n~~GRl~~G~lsD~l~r~~~~~r~~~l~~~~ 437 (594)
..|+..+..++..-.--.+...+-|-.+++ +.+.+ -..++..+++-+++-+..|+=+-|.++- +.| +.+..
T Consensus 35 si~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~-k~P----li~s~ 109 (488)
T KOG2325|consen 35 SIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSV-KKP----LIVSF 109 (488)
T ss_pred hHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCc-ccC----HHHHH
Confidence 346665655555544444555666666663 33322 2378899999999999999999776542 223 35667
Q ss_pred HHHHHHHHHH-h--c-cC--chhHHHHHHHHHhhhhhccchhHHHHH
Q 007654 438 FVMAIGHIFL-G--M-GW--PGAMYVGTLLIGLGYGAHWAIVPAAAS 478 (594)
Q Consensus 438 ~~~~~~~ll~-~--~-~~--~~~l~~~~~liG~~~G~~~~l~p~i~s 478 (594)
+++++|+++. . . .+ ...+.++=++.|++.|..-.+=.+++.
T Consensus 110 ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~a~lR~Y~a~ 156 (488)
T KOG2325|consen 110 LIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNFAVLRAYIAD 156 (488)
T ss_pred HHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccHHHHHHHHHh
Confidence 7778887664 2 1 11 235666788889988865544444433
No 262
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=41.26 E-value=51 Score=36.72 Aligned_cols=154 Identities=16% Similarity=0.188 Sum_probs=77.0
Q ss_pred hhhhhhhhcchh-HHHHHHHHHHHHhcCcccccccccHHHHhhhCCChhhHHHHHHHHhhhh-hcccchhhhhchhhh-H
Q 007654 4 FQERFVSFFNNR-WLVFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGD-SVGFLAGSLCEVLPI-W 80 (594)
Q Consensus 4 ~~~~~~~~~~~R-w~~l~a~~~i~l~~Gt~Y~fS~ys~~Lk~~lg~sq~~l~~i~~a~~~G~-~~gi~~G~l~D~~gp-~ 80 (594)
|.+.+|+..+|| +++++. .-.+..|..|+++..-.+.-.--||++.....++.-..+++ ..++..|.+.||... +
T Consensus 255 f~~si~~~~~n~~F~il~~--~ygi~~g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk 332 (480)
T KOG2563|consen 255 FPKSIKSCFKNRQFIILAI--CYGIGLGLFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFK 332 (480)
T ss_pred HHHHHHHHHcCccHHHHHH--HHhhhHHHHHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHH
Confidence 444555555555 444443 34455567777777777333345688755555655544444 557899999999866 3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHhhccccchhhhhHHHHHHHhcCCCCCceehhhHhhhhhhHHH
Q 007654 81 GALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAI 160 (594)
Q Consensus 81 ~~l~iG~~~~~~Gy~~~~l~~~g~i~~~s~~~l~~~~~l~g~G~~~~~taal~t~~k~FP~~RG~~~Gl~~a~~GLSa~i 160 (594)
-+..+-...-..+-.++ ...+..- -.+++.......++-++.+..=..-=...---||..-|+-+|++. ++|-+
T Consensus 333 ~~~~v~~~~~~v~~~~l-~~~t~~~-~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~----~~gq~ 406 (480)
T KOG2563|consen 333 LTTLVLYLFALVGTLML-LTCTLFL-GDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLN----LSGQI 406 (480)
T ss_pred HHHHHHHHHHHHHHHHH-HHhhccC-CceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEE----eehhH
Confidence 33222222222332222 1222221 112333223444454444422111111122358988888888774 45555
Q ss_pred HHHHH
Q 007654 161 LTQVY 165 (594)
Q Consensus 161 ~s~i~ 165 (594)
+..++
T Consensus 407 f~~~~ 411 (480)
T KOG2563|consen 407 FGVIL 411 (480)
T ss_pred HHHHH
Confidence 54444
No 263
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=37.24 E-value=96 Score=36.70 Aligned_cols=75 Identities=12% Similarity=0.173 Sum_probs=47.6
Q ss_pred hhhhhhhhcchhHHHHHHHHHHHHhcCccccccccc-HHHHhhhCCChhhHHHH-HHHHhhhhhccc-chhhhhchhhh
Q 007654 4 FQERFVSFFNNRWLVFVAAMWIQSCAGIGYLFGSIS-PVIKSSLNYNQKQIARL-GVAKDLGDSVGF-LAGSLCEVLPI 79 (594)
Q Consensus 4 ~~~~~~~~~~~Rw~~l~a~~~i~l~~Gt~Y~fS~ys-~~Lk~~lg~sq~~l~~i-~~a~~~G~~~gi-~~G~l~D~~gp 79 (594)
|+...|+...|+..++..-..+.-... .-.|..|- +-|..|||.++++.|.+ +.....+...|+ ++|++.-|+-+
T Consensus 381 fp~s~~~ll~N~if~~~~l~~~~~~~~-~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl 458 (735)
T KOG3626|consen 381 FPKSIKRLLSNPIFMLVVLASVIESLA-ITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKL 458 (735)
T ss_pred HHHHHHHHhcCchHHHHHHHHHHHHHH-HhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecc
Confidence 556777888887653332222221111 11344454 45677899999999996 666666666655 69999998854
No 264
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=32.47 E-value=1.4e+02 Score=27.99 Aligned_cols=23 Identities=13% Similarity=0.160 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhh
Q 007654 560 SGLCIVAVILSMILVHRTTNVYS 582 (594)
Q Consensus 560 ~~~~~~a~~ls~~l~~r~r~~~~ 582 (594)
+...++++++++++.+|++|..+
T Consensus 107 ~~~~~lg~~l~fl~~r~ysRkl~ 129 (150)
T COG3086 107 IFGAFLGLALGFLLARRYSRKLA 129 (150)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhh
Confidence 34556788888988888776554
No 265
>PF10283 zf-CCHH: Zinc-finger (CX5CX6HX5H) motif; InterPro: IPR019406 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. C2H2-type (classical) zinc fingers (Znf) were the first class to be characterised. They contain a short beta hairpin and an alpha helix (beta/beta/alpha structure), where a single zinc atom is held in place by Cys(2)His(2) (C2H2) residues in a tetrahedral array. C2H2 Znf's can be divided into three groups based on the number and pattern of fingers: triple-C2H2 (binds single ligand), multiple-adjacent-C2H2 (binds multiple ligands), and separated paired-C2H2 []. C2H2 Znf's are the most common DNA-binding motifs found in eukaryotic transcription factors, and have also been identified in prokaryotes []. Transcription factors usually contain several Znf's (each with a conserved beta/beta/alpha structure) capable of making multiple contacts along the DNA, where the C2H2 Znf motifs recognise DNA sequences by binding to the major groove of DNA via a short alpha-helix in the Znf, the Znf spanning 3-4 bases of the DNA []. C2H2 Znf's can also bind to RNA and protein targets []. This entry represents a C2H2-type Znf motif that in humans is part of the APLF (aprataxin- and PNK-like) forkead association domain-containing protein []. The Znf is highly conserved both in primary sequence and in the spacing between the putative zinc coordinating residues, and is configured CX5CX6HX5H. Many of the proteins containing this Znf are involved in DNA strand break repair and/or contain domains implicated in DNA metabolism. This Znf motif appears to be specialised for the non-covalent binding of poly ADP-ribose; Aprataxin also appears to covalently bind poly ADP-ribose, but not through its Znf motif [].; PDB: 2KQC_A 2KUO_A 2KQE_A 2KQD_A 2KQB_A.
Probab=30.55 E-value=18 Score=23.74 Aligned_cols=10 Identities=40% Similarity=0.926 Sum_probs=5.1
Q ss_pred cc-ccCcccHH
Q 007654 545 KC-EGSICYFL 554 (594)
Q Consensus 545 ~C-~G~~Cy~~ 554 (594)
.| +|..|||.
T Consensus 2 ~C~YG~~CYRk 12 (26)
T PF10283_consen 2 PCKYGAKCYRK 12 (26)
T ss_dssp E-TTGGG-S--
T ss_pred CCCcchhhhcC
Confidence 48 89999984
No 266
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=25.82 E-value=9.3e+02 Score=26.60 Aligned_cols=53 Identities=15% Similarity=0.223 Sum_probs=33.1
Q ss_pred hHHHHHHHHHhhccccchhhhhHHHHHHHhcCCCCCceehhhHhhhhhhHHHHHHHH
Q 007654 109 PLWAMCILIFVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAILTQVY 165 (594)
Q Consensus 109 s~~~l~~~~~l~g~G~~~~~taal~t~~k~FP~~RG~~~Gl~~a~~GLSa~i~s~i~ 165 (594)
.++..++..++.|.+.+.. ...+..-+..||.+ -++....+-|++|.+-+.+.
T Consensus 105 ~f~~~~~~v~~~g~~~~~~-q~s~~gla~~fp~~---~~~a~~~G~g~aGv~~s~~~ 157 (437)
T TIGR00939 105 FFVTTMASVVIINSGMALL-QGSLFGLAGVFPST---YSSAVMSGQGLAGVLTSLAM 157 (437)
T ss_pred HHHHHHHHHHHHHhhhhhh-cccchhhcccCCHH---HHHHHHhcchhHHHHHHHHH
Confidence 3555555666667776654 45566677789954 35556667788886655443
No 267
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=25.39 E-value=5e+02 Score=28.71 Aligned_cols=93 Identities=16% Similarity=0.205 Sum_probs=58.8
Q ss_pred hhHHHHHHHHHhhhhhccchhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHHhhhhcccCcccccccccc
Q 007654 453 GAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYDHEAEKQHQPHHHLLNAGS 532 (594)
Q Consensus 453 ~~l~~~~~liG~~~G~~~~l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd~~~~~~~~~~~~~~~~~~ 532 (594)
..+.+.=+.-|++..++.+-+.++-+.. ..+||=+.=+..=.+..+|.. ++. +.|.+-=..+
T Consensus 95 ~~mq~~q~~yg~~~a~evay~sYiys~v-~~~~yq~vts~~raa~l~g~~-~s~-~lgQllvs~~--------------- 156 (412)
T PF01770_consen 95 LAMQLMQFFYGLATAAEVAYYSYIYSVV-DKEHYQKVTSYTRAATLVGRF-ISS-LLGQLLVSFG--------------- 156 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHheeec-CHHHHHHHHHHHHHHHHHHHH-HHH-HHHHHHHHhc---------------
Confidence 3455566666777777666666655544 446665555444455545444 243 3344333322
Q ss_pred cccCCCCCCCCCccccCcccHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 007654 533 IFTSMPRVDEPLKCEGSICYFLTSMIMSGLCIVAVILSMILVHRTTN 579 (594)
Q Consensus 533 ~~~~~~~~~~~~~C~G~~Cy~~~f~i~~~~~~~a~~ls~~l~~r~r~ 579 (594)
...|..-++++.+...+++++++++-..+|+
T Consensus 157 ----------------~~sy~~L~~isl~~~~~a~~~~~fLP~~~~S 187 (412)
T PF01770_consen 157 ----------------GVSYFQLNYISLASVSLALLIALFLPMPKRS 187 (412)
T ss_pred ----------------CCCHHHHHHHHHHHHHHHHHHHHHcCCCCcc
Confidence 1269999999999999999999998887765
No 268
>PF10225 DUF2215: Uncharacterized conserved protein (DUF2215); InterPro: IPR024233 This entry represents a domain that is found in a number of different proteins, including a family of transmembrane proteins.
Probab=25.15 E-value=7.4e+02 Score=25.25 Aligned_cols=36 Identities=19% Similarity=0.248 Sum_probs=27.7
Q ss_pred hHHHHHHHhcCCCCCceehhhHhhhhhhHHHHHHHHH
Q 007654 130 AALVSCVQNFPKSRGPVVGILKGFAGLGGAILTQVYT 166 (594)
Q Consensus 130 aal~t~~k~FP~~RG~~~Gl~~a~~GLSa~i~s~i~~ 166 (594)
-.+--..|-.| +|....+++.++.++|..++-++..
T Consensus 52 i~~~~~~k~lP-rk~~~~~~l~gg~~~~~y~l~~~~~ 87 (249)
T PF10225_consen 52 ILLFQLSKLLP-RKSMFYAVLYGGWSFGLYFLQQLWE 87 (249)
T ss_pred HHHHHHHHHcc-CcchhHHHHhhhhHHHHHHHHHHHH
Confidence 34555679999 7777788888888898877777765
No 269
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=21.84 E-value=1.2e+03 Score=26.28 Aligned_cols=42 Identities=17% Similarity=0.301 Sum_probs=32.5
Q ss_pred hhHHHHHHhhccCchhhhhhHHHhhhhHHHHHHHHHHHHHHHH
Q 007654 472 IVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYD 514 (594)
Q Consensus 472 l~p~i~s~~FG~k~~g~nyg~~~~a~~~g~~~~~~~l~G~iyd 514 (594)
++=.+..|.+-.+.-.+-|+++..+..+|.+ +++.+..++.+
T Consensus 149 lFW~fandi~t~~qakRfy~l~~~ganlg~i-~sg~~~~~~~~ 190 (472)
T TIGR00769 149 LFWGFANQITTIDEAKRFYALFGLGANVALI-FSGRTIKYFSK 190 (472)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 3445677888888888999999999999888 48777766654
No 270
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=21.49 E-value=92 Score=35.62 Aligned_cols=52 Identities=21% Similarity=0.134 Sum_probs=41.3
Q ss_pred HhhhCCChhhHHHH-HHHHhhhhhcccchhhhhchhhhHHHHHHHHHHHHHHH
Q 007654 43 KSSLNYNQKQIARL-GVAKDLGDSVGFLAGSLCEVLPIWGALLVGALQNFIGY 94 (594)
Q Consensus 43 k~~lg~sq~~l~~i-~~a~~~G~~~gi~~G~l~D~~gp~~~l~iG~~~~~~Gy 94 (594)
-+++|++..+.-++ ++.-.+.....+++|.+.||+-.+-.+++|+.+..+..
T Consensus 38 ~kQLGl~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~r~~r~lllgsl~~~v~a 90 (618)
T KOG3762|consen 38 FKQLGLNPAVVGTLTGTLPLVEFLAAPLWGFLADRYRKRRPLLLGSLLLSVTA 90 (618)
T ss_pred HHHcCCCHHHhhhhhhHHHHHHHHhHHHHHHHHHHHHhcCchhHHHHHHHHHH
Confidence 35799999999996 66666666678899999999998888888887644433
Done!