Query 007655
Match_columns 594
No_of_seqs 301 out of 1526
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 07:12:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007655.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007655hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4fo0_A Actin-related protein 8 100.0 1.9E-95 7E-100 822.3 30.8 530 5-578 1-590 (593)
2 4am6_A Actin-like protein ARP8 100.0 8.1E-92 2.8E-96 771.7 24.0 514 15-578 37-652 (655)
3 3qb0_A Actin-related protein 4 100.0 9.5E-69 3.2E-73 585.1 25.1 377 172-577 62-497 (498)
4 3dwl_A Actin-related protein 3 100.0 3.9E-68 1.3E-72 574.3 17.6 326 172-578 72-422 (427)
5 2fxu_A Alpha-actin-1, actin, a 100.0 2.4E-61 8.2E-66 514.8 25.2 322 172-578 50-375 (375)
6 1k8k_B ARP2, actin-like protei 100.0 8.5E-63 2.9E-67 529.3 12.2 320 172-575 53-388 (394)
7 1k8k_A ARP3, actin-like protei 100.0 2.3E-57 7.8E-62 490.8 24.7 326 172-578 58-413 (418)
8 1jce_A ROD shape-determining p 99.9 3.9E-27 1.3E-31 247.4 20.2 280 173-557 41-331 (344)
9 3h1q_A Ethanolamine utilizatio 99.7 3.7E-17 1.3E-21 165.5 8.7 214 192-550 59-272 (272)
10 2v7y_A Chaperone protein DNAK; 99.6 1.4E-15 4.8E-20 167.9 11.4 224 239-552 112-350 (509)
11 3qfu_A 78 kDa glucose-regulate 99.5 6.4E-15 2.2E-19 156.8 6.8 91 239-330 156-255 (394)
12 1dkg_D Molecular chaperone DNA 99.5 2.1E-14 7.1E-19 152.5 5.7 224 239-552 138-381 (383)
13 3i33_A Heat shock-related 70 k 99.4 3E-14 1E-18 152.4 5.0 91 239-330 161-263 (404)
14 1yuw_A Heat shock cognate 71 k 99.1 7.2E-10 2.5E-14 123.4 13.2 91 239-330 142-242 (554)
15 2ych_A Competence protein PILM 99.0 2.3E-09 8E-14 113.2 14.2 90 256-363 156-252 (377)
16 2kho_A Heat shock protein 70; 99.0 6.1E-10 2.1E-14 125.2 8.7 139 215-362 120-276 (605)
17 3d2f_A Heat shock protein homo 99.0 1.8E-09 6E-14 122.8 11.3 91 239-330 141-246 (675)
18 4gni_A Putative heat shock pro 98.9 5.2E-09 1.8E-13 111.9 10.8 111 214-331 134-255 (409)
19 4a2a_A Cell division protein F 98.8 3.6E-08 1.2E-12 105.8 12.4 90 254-361 171-265 (419)
20 4b9q_A Chaperone protein DNAK; 98.7 8.3E-08 2.8E-12 107.8 11.9 109 215-330 120-241 (605)
21 2fsj_A Hypothetical protein TA 98.4 4.8E-07 1.6E-11 94.6 8.8 137 172-332 78-240 (346)
22 1nbw_A Glycerol dehydratase re 97.7 0.00021 7.2E-09 77.4 13.2 72 272-361 392-468 (607)
23 2d0o_A DIOL dehydratase-reacti 97.7 0.00017 5.7E-09 77.9 11.7 93 251-361 369-466 (610)
24 3js6_A Uncharacterized PARM pr 97.2 0.00056 1.9E-08 71.5 7.6 68 265-332 154-232 (355)
25 2zgy_A Plasmid segregation pro 97.1 0.00045 1.5E-08 71.0 6.2 71 261-331 136-212 (320)
26 4apw_A ALP12; actin-like prote 96.8 0.0014 4.7E-08 67.7 6.3 67 265-331 149-219 (329)
27 1t6c_A Exopolyphosphatase; alp 85.7 2.5 8.7E-05 42.8 9.1 42 283-326 137-178 (315)
28 3cet_A Conserved archaeal prot 80.6 1.2 4E-05 45.5 4.1 25 284-308 127-151 (334)
29 4ehu_A Activator of 2-hydroxyi 78.8 0.31 1.1E-05 48.2 -0.9 66 471-551 188-253 (276)
30 3mdq_A Exopolyphosphatase; str 78.4 2.3 7.8E-05 43.1 5.5 41 284-326 131-171 (315)
31 3cer_A Possible exopolyphospha 77.0 2 6.8E-05 44.2 4.6 43 284-326 146-192 (343)
32 1u6z_A Exopolyphosphatase; alp 69.5 6.4 0.00022 42.7 6.6 40 285-326 138-177 (513)
33 3hi0_A Putative exopolyphospha 67.2 8.7 0.0003 41.6 7.0 39 284-324 140-178 (508)
34 3aap_A Ectonucleoside triphosp 46.6 16 0.00055 37.5 4.5 35 284-318 140-176 (353)
35 2ews_A Pantothenate kinase; PA 45.1 2.9 0.0001 41.8 -1.4 72 470-550 214-286 (287)
36 2i7n_A Pantothenate kinase 1; 35.5 12 0.00041 38.6 1.4 74 470-549 283-357 (360)
37 3js6_A Uncharacterized PARM pr 34.0 3.6 0.00012 42.3 -2.8 45 491-551 289-335 (355)
38 2zgy_A Plasmid segregation pro 31.2 6.1 0.00021 39.7 -1.7 47 493-550 273-319 (320)
39 2fsj_A Hypothetical protein TA 31.0 6 0.00021 40.4 -1.8 32 20-52 23-54 (346)
40 4apw_A ALP12; actin-like prote 30.6 15 0.00052 37.1 1.2 46 492-551 278-323 (329)
41 2gup_A ROK family protein; sug 24.1 1.3E+02 0.0046 28.9 6.9 52 255-309 87-143 (292)
42 1hux_A Activator of (R)-2-hydr 23.7 8.2 0.00028 37.9 -2.3 54 494-559 210-263 (270)
43 2e1z_A Propionate kinase; TDCD 23.6 32 0.0011 36.0 2.1 31 284-315 210-240 (415)
44 3djc_A Type III pantothenate k 23.0 1.2E+02 0.0041 29.6 6.1 48 286-333 4-52 (266)
45 1g99_A Acetate kinase; alpha/b 20.6 37 0.0013 35.4 1.9 31 284-315 202-232 (408)
46 3cj1_A Ectonucleoside triphosp 20.6 73 0.0025 33.8 4.2 35 284-318 190-225 (456)
No 1
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.9e-95 Score=822.26 Aligned_cols=530 Identities=30% Similarity=0.516 Sum_probs=382.1
Q ss_pred cccCchhhhhhcCCC-EEEEcCCCceeeeecCCCCCCCccceeEEEecCCCCcccchhhhccccc--cchhhhhHHHHHH
Q 007655 5 KTVVPSQLIAERGSN-LVVINPGSANIRIGLAQHDTPLNIPHCIARRTSQVPKRNVVDQMLNSQV--TTSQHVERERAYD 81 (594)
Q Consensus 5 ~~~~~~~~~~~~~~~-~iVihpGS~~lriG~asd~~P~~ip~~iA~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 81 (594)
++|+|++..++++++ ||||||||++||||||+|..|++||||||||+++.......+..+.... ..+..+++.....
T Consensus 1 ~p~~~~~~~~~~~~~~iIVIdpGS~~~riG~A~d~~P~~iP~~iar~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (593)
T 4fo0_A 1 GPLVPESLQEQIQSNFIIVIHPGSTTLRIGRATDTLPASIPHVIARRHKQQGQPLYKDSWLLREGLNKPESNEQRQNGLK 80 (593)
T ss_dssp CCCCCGGGTTTSGGGGEEEEECCSSEEEEEETTCSSCEEEECCEEEECSSTTCCCCBCCSSCCTTTTSTTHHHHHHHHHH
T ss_pred CCCCCCccccccCCCCEEEEeCCCCCeEeeecCCCCCCeeeEEEEEECCCCCCCcccccccccccccccchhhhhhhhHH
Confidence 589999999988765 9999999999999999999999999999999876333333222221111 1122222333333
Q ss_pred HHHhhcCCCcchhhhhcCCCCcccccccccccccccccccccccccccCCCCCCCcccccccccccCcccccCCCCCccc
Q 007655 82 VIASLMKIPFLDEEVANNSFPRKMGRVDAFNQQNSRKDVAFSWTNVYEKEPMPSTALESSSSMNHGIIKESMGQHRNTDI 161 (594)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~e~~~~~~~~~~ 161 (594)
.+.+.++.. +..+++|+. ++++|++++||++.+||.+++++++.+
T Consensus 81 ~~~~~~~~~----------------------------------~~~~~~r~~-~~s~~~~~~~n~~~~p~~i~~~~~~~~ 125 (593)
T 4fo0_A 81 MVDQAIWSK----------------------------------KMSNGTRRI-PVSPEQARSYNKQMRPAILDHCSGNKW 125 (593)
T ss_dssp HHHHHHHHS----------------------------------CCTTSCCCC-CCCHHHHHHHHTTCCCEEEESSCSCCC
T ss_pred HHHHHHHHH----------------------------------hhhcccccC-CCcHHHhhhhhccCCCcccCCCCcccc
Confidence 222222111 112334444 499999999999999999988755543
Q ss_pred cccccccccCCceEEccccccCCCCCCceEEcceecCeeeec--CCCChhhcHHHHHHHHHHHHhhhcCCCCCCCcccce
Q 007655 162 KELNSSERKFREFICGEEALRVSPTEPYCIHRPIRRGHLNIS--QHYPMQQVLEDLYAIWDWILTEKLHIPRSERNLYSA 239 (594)
Q Consensus 162 ~~~~~~~~~~~~~~vGdeAl~~~~~~~~~l~~Pi~~G~~n~~--~~~s~~~~~~dle~iw~~~l~~~L~i~~~d~~~y~~ 239 (594)
.+ ....+++|||+||+++++.+.|.|+|||+||.||++ +|.|++.+|+|||.||+|+|+++|+|++++++.|.+
T Consensus 126 ~~----~~~~~~~~vG~~al~~~~~~~~~l~~Pi~~G~~n~~~~~~~s~~~~wdd~e~iw~~~~~~~L~i~~~d~~~~pv 201 (593)
T 4fo0_A 126 TN----TSHHPEYLVGEEALYVNPLDCYNIHWPIRRGQLNIHPGPGGSLTAVLADIEVIWSHAIQKYLEIPLKDLKYYRC 201 (593)
T ss_dssp CC----CTTCCSEEETHHHHTSCTTSSEEEECSEETTEECCCSSTTCSHHHHHHHHHHHHHHHHHHTSCCCGGGGGGCEE
T ss_pred cc----ccccccccccHHHhhcCCcccceEecCcccCccccccCCccchhcCHHHHHHHHHHHHHHhcCCCchhccCCcE
Confidence 22 234578999999999987889999999999999997 556999999999999999999999999998777756
Q ss_pred eeecCCCCChHHHHHHHHHHHHhcCCCeEEEeehhhHHhhhcCCceEEEEEeCCCceEEEEeeCCeeccCCcEEecchHH
Q 007655 240 ILVLPESFDNREIKEMLSIVLRDLRFASAVVHQEGLAAVFGNGLSTACVVNMGAQVTSVICVEDGVALPNTEKTLPFGGE 319 (594)
Q Consensus 240 VLvip~~~~~~~vr~l~ellfE~~~f~~v~~~~esvla~ygaG~stg~VVDiG~~~TsV~pV~dG~vl~~s~~~l~~GG~ 319 (594)
||+.|+.+.+.++++|+++|||.|+||++|++++++||+||+|++||||||||++.|+|+||+||+++.++++++++||+
T Consensus 202 lltep~~~~~~~re~~~eilFE~f~~pa~~~~~~~vla~ya~G~~tglVVDiG~~~T~v~PV~dG~~l~~~~~rl~~GG~ 281 (593)
T 4fo0_A 202 ILLIPDIYNKQHVKELVNMILMKMGFSGIVVHQESVCATYGSGLSSTCIVDVGDQKTSVCCVEDGVSHRNTRLCLAYGGS 281 (593)
T ss_dssp EEEECSSCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHTCSEEEEEEECSSCEEEEEEESSCBCGGGCEEESCCHH
T ss_pred EEEeCCCCCHHHHHHHHHHHHHhcCCCeEEeechHHHHHHHCCCCceEEEEeCCCceeeeeeECCEEehhheEEecccHH
Confidence 66666666777767799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCCcccccccchhhHHHHHHHHHhcccccCCccccceeeecccCCCCCCC-ceeEee---eeccC
Q 007655 320 DISRCLLWTQRHHQTWPQIRTDILTKAMDLLMLNRIKESYCEIKEGEIDAVAVVHSYEDGMPPGS-HKTRLI---ALNVP 395 (594)
Q Consensus 320 dit~~l~~lL~~~~~~p~~~~~~l~~~~d~~l~e~lKe~~c~v~~~~~~~~~~~~~~~~~~p~~~-~k~~~~---~~~~a 395 (594)
+||++|.+||+.++ +| +.+.++.+..|++++++|||++|||+.+....... .+....|++. .++.++ +...+
T Consensus 282 ~lt~~L~~lL~~~~-~~-~~~~~~~~~~d~~~v~~iKe~~c~v~~d~~~~~~~--~~~~~~p~~~~~~~~~~~~~E~~~~ 357 (593)
T 4fo0_A 282 DVSRCFYWLMQRAG-FP-YRECQLTNKMDCLLLQHLKETFCHLDQDISGLQDH--EFQIRHPDSPALLYQFRLGDEKLQA 357 (593)
T ss_dssp HHHHHHHHHHHHTT-CS-CTTCCTTCHHHHHHHHHHHHHHCBCCTTCCSCEEE--EEEECCTTSCEEEEEEEECTHHHHH
T ss_pred HHHHHHHHHHHhcC-CC-ccccccccchhHHHHHHHHHHhcccccchHHhhhh--hhhcccCCCCceeeEEeccchhhcC
Confidence 99999999998775 33 55667778899999999999999999764432211 1112245432 344443 45689
Q ss_pred CCcCCCCcccCCCCCCCC---CCCCCCCcc---------------------------ccccCCccccCC-CCCCCCCCCC
Q 007655 396 PMGLFYPKLLVPDVYPPP---PRSWFNDYE---------------------------DMLEDTWHTDFP-RRSDISDNFY 444 (594)
Q Consensus 396 P~~lf~p~~~~~e~~~~p---~~~~~~~~e---------------------------d~~~d~~~~~~~-~r~~~~E~lf 444 (594)
|+++|+|.++..+..... .+. ..+++ ...+++..+.++ +|+.++|.+|
T Consensus 358 p~~lf~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~~~~e~~~~pe~lf 436 (593)
T 4fo0_A 358 PMALFYPATFGIVGQKMTTLQHRS-QGDPEDPHDEHYLLATQSKQEQSAKATADRKSASKPIGFEGDLRGQSSDLPERLH 436 (593)
T ss_dssp HHTTTSGGGGCCCSSCCEEECC----------------------------------------------------------
T ss_pred chhhcChhhhcccccccchhhhhc-ccCcccchhhhhhhhcccchhhhhhcccccccccCCCCcccccccccccCchhcc
Confidence 999999998864321100 000 00000 112233334343 7899999998
Q ss_pred -CCCCCCCCCC-------CCCCcc--------CCCCCcccCCCHHHHHHHHHhccCChhHHHHHhcCeEEEcCCCCcCCh
Q 007655 445 -PGINVGLPMW-------ESYPVL--------TTKPKKEEKIGLAEAVTSSILSTGRIDLQRKLFCSIQLIGGVALTGGL 508 (594)
Q Consensus 445 -p~~~~~~~~~-------~~~~~~--------~~~~~~~~~~~L~~~I~~sI~~~~~~d~r~~L~~nIvL~GG~S~ipGf 508 (594)
|....+.... ...... .......+..||+++|++||.+|+..|+|++||+|||||||+|++|||
T Consensus 437 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gL~~aI~~SI~~~~~~D~r~~L~~NIvltGG~s~~pGf 516 (593)
T 4fo0_A 437 SQEVDLGSAQGDGLMAGNDSEEALTALMSRKTAISLFEGKALGLDKAILHSIDCCSSDDTKKKMYSSILVVGGGLMFHKA 516 (593)
T ss_dssp ----------------------------------CHHHHSCCCHHHHHHHHHHTCSSHHHHHHHHHEEEEESSTTCCBTH
T ss_pred CcccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhCCcHHHHHHHhCCEEEEchhhchhcH
Confidence 4322110000 000000 000112345799999999999994469999999999999999999999
Q ss_pred HHHHHHHHhhhCCCCCC--cceEEEcCCC--CCCceeEEeceeeecccCCccccceeHHHHHHcCCCeeeeccc
Q 007655 509 IPAVEERVLHAIPSNEA--IDMVEVLQSR--TNPTYVSWKGGAVLGILDFGRDAWIHREDWIRNGIHIGSGRKY 578 (594)
Q Consensus 509 ~eRL~~eL~~~~p~~~~--~~~V~v~~~~--~dp~~~aW~GgSIla~L~sf~~~wITr~eyee~G~~il~~K~~ 578 (594)
.+||++||+.++|...+ +.+|+|++.+ .||++++|+||||||+|++|+++||||+||+|+|++||++||.
T Consensus 517 ~~RL~~eL~~~~p~~~~~~~~~v~v~~~p~~~d~~~~aW~GgSilasL~~f~~~wItk~EYeE~G~~il~~kc~ 590 (593)
T 4fo0_A 517 QEFLQHRILNKMPPSFRRIIENVDVITRPKDMDPRLIAWKGGAVLACLDTTQELWIYQREWQRFGVRMLRERAA 590 (593)
T ss_dssp HHHHHHHHHHHSCHHHHHHSSCCEEESSGGGCCTTTHHHHHHHHHHHCGGGGGTCEEHHHHHHHTTHHHHHHCS
T ss_pred HHHHHHHHHHhCcchhccccceEEEECCCCCCCCceeeehhhHHHhcCccHHHeeECHHHHHhhCcHHHhhcCC
Confidence 99999999999986532 2356777643 6999999999999999999999999999999999999999995
No 2
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=100.00 E-value=8.1e-92 Score=771.67 Aligned_cols=514 Identities=21% Similarity=0.368 Sum_probs=383.6
Q ss_pred hcCCCEEEEcCCCceeeeecCCCCCCCccceeEEEecCCCCcccchhhhccccccchhhhhHHHHHHHHHhhcCCCcchh
Q 007655 15 ERGSNLVVINPGSANIRIGLAQHDTPLNIPHCIARRTSQVPKRNVVDQMLNSQVTTSQHVERERAYDVIASLMKIPFLDE 94 (594)
Q Consensus 15 ~~~~~~iVihpGS~~lriG~asd~~P~~ip~~iA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (594)
..+++||||||||+|||||||||++|++||||||||++....+.... ...+....+..++++..+.+|++.||.+
T Consensus 37 ~~~~~~IVIHpGS~~lRIG~AsD~~P~~ip~~iA~~~~~~~~~~~~~-~~~~~~~~~~~~~f~~~~~~~~~~~k~r---- 111 (655)
T 4am6_A 37 NDPTATIVIHPGSNSIKIGFPKDDHPVVVPNCVAVPKKWLDLENSEH-VENVCLQREQSEEFNNIKSEMEKNFRER---- 111 (655)
T ss_dssp CCGGGEEEEECCSSEEEEECTTSSSCEEEESCEEEEGGGSCCSSSCC-CCTTCCCSCCCHHHHHHHHHHHHHHHHH----
T ss_pred cCCCCeEEEcCCCcceeeeecCCCCCcccceeEEeccccccCCCccc-cCccccchhhhHHHHHHHHHHHHHHHHH----
Confidence 45799999999999999999999999999999999976421110000 0000012234467777777777776532
Q ss_pred hhhcCCCCcccccccccccccccccccccccccccCCCCCCCcccccccccccCcccccCCCCCccccccccccccCCce
Q 007655 95 EVANNSFPRKMGRVDAFNQQNSRKDVAFSWTNVYEKEPMPSTALESSSSMNHGIIKESMGQHRNTDIKELNSSERKFREF 174 (594)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 174 (594)
|+.||||+.| |++|++++||++.+||.|++|||+...+|... .+++
T Consensus 112 ------------------------------mr~~k~r~~p-n~~e~~~~fN~~~~Pe~i~~~nDp~~~~W~~~---~~d~ 157 (655)
T 4am6_A 112 ------------------------------MRYYKRKVPG-NAHEQVVSFNENSKPEIISEKNDPSPIEWIFD---DSKL 157 (655)
T ss_dssp ------------------------------HHHHSCCCST-TCCSSTTCCEEEECSCCCCSSSSCCSCCCBCC---TTSC
T ss_pred ------------------------------HhhcCCCCCC-CCHHHHHHhcCCCCCeECCCCCCccccccccC---CCCE
Confidence 4556777776 99999999999999999999988877666432 2689
Q ss_pred EEccccccCCCCCCceEEcceecCeeeec--CCCChhhcHHHHHHHHHHHHh-hhcCCCCC---CCcccceeeecCCCCC
Q 007655 175 ICGEEALRVSPTEPYCIHRPIRRGHLNIS--QHYPMQQVLEDLYAIWDWILT-EKLHIPRS---ERNLYSAILVLPESFD 248 (594)
Q Consensus 175 ~vGdeAl~~~~~~~~~l~~Pi~~G~~n~~--~~~s~~~~~~dle~iw~~~l~-~~L~i~~~---d~~~y~~VLvip~~~~ 248 (594)
|||+||+.+. .+.+.++|||++|.++.+ +|.|+|.+|+++|.||+|+|. ++|+++++ ++ +||+++++++
T Consensus 158 ~VGdEA~~~~-r~~l~l~~PI~~GvI~~~s~Dy~s~q~~WD~mE~Iw~y~f~~~~L~V~p~~~~e~----pVLLTEPpln 232 (655)
T 4am6_A 158 YYGSDALRCV-DEKFVIRKPFRGGSFNVKSPYYKSLAELISDVTKLLEHALNSETLNVKPTKFNQY----KVVLVIPDIF 232 (655)
T ss_dssp EEHHHHHTBC-TTTEEEECSEETTEECTTCSSCSSHHHHHHHHHHHHHHHHBSSSCBCCGGGGGGC----EEEEEECTTC
T ss_pred EEehHHhhCC-ccCeEEeccccCCEecccCCccccccccHHHHHHHHHHHhccccccccccccCCC----cEEEEeCCCC
Confidence 9999999864 368999999999999854 677999999999999999998 48999886 45 7888888887
Q ss_pred hHHHH-HHHHHHHHhcCCCeEEEeehhhHHhhhcC-CceEEEEEeCCCceEEEEeeCCeeccCCcEEecchHHHHHHHHH
Q 007655 249 NREIK-EMLSIVLRDLRFASAVVHQEGLAAVFGNG-LSTACVVNMGAQVTSVICVEDGVALPNTEKTLPFGGEDISRCLL 326 (594)
Q Consensus 249 ~~~vr-~l~ellfE~~~f~~v~~~~esvla~ygaG-~stg~VVDiG~~~TsV~pV~dG~vl~~s~~~l~~GG~dit~~l~ 326 (594)
++..| +|+++|||.||||+++++++++||+||+| .++|||||+|++.|+|+||+||+++.+++.++++||+++|++|.
T Consensus 233 p~~~REkm~EIlFE~fgvpavyl~~qavlAlyasGl~ttGLVVDiG~g~T~VvPV~eG~vl~~ai~rL~iGG~dLT~yL~ 312 (655)
T 4am6_A 233 KKSHVETFIRVLLTELQFQAVAIIQESLATCYGAGISTSTCVVNIGAAETRIACVDEGTVLEHSAITLDYGGDDITRLFA 312 (655)
T ss_dssp CHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHSCCSSCEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhhcCCCeeeeccHHHHHHHhCCCCCceEEEcCCCceEEEEEEeCCEEEhhheeeecchHHHHHHHHH
Confidence 77766 49999999999999999999999999999 69999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCcccccccchhhHHHHHHHHHhcccccCCccccceeeecccCCCCCC-CceeEee---eeccCCCcCCCC
Q 007655 327 WTQRHHQTWPQIRTDILTKAMDLLMLNRIKESYCEIKEGEIDAVAVVHSYEDGMPPG-SHKTRLI---ALNVPPMGLFYP 402 (594)
Q Consensus 327 ~lL~~~~~~p~~~~~~l~~~~d~~l~e~lKe~~c~v~~~~~~~~~~~~~~~~~~p~~-~~k~~~~---~~~~aP~~lf~p 402 (594)
++|+.++. | |++++|++..+++++++|||++|||+..++.. +.+..+. ..|++ +.||.++ +.++||++||+|
T Consensus 313 kLL~~rgy-p-y~~~~f~t~~e~eiVrdIKEk~CyVs~~Di~~-q~~~f~~-r~P~~~~~ky~i~vgdErflaPe~lF~P 388 (655)
T 4am6_A 313 LFLLQSDF-P-LQDWKIDSKHGWLLAERLKKNFTTFQDADVAV-QLYNFMN-RSPNQPTEKYEFKLFDEVMLAPLALFFP 388 (655)
T ss_dssp HHHHHTTC-S-CCSCCTTSHHHHHHHHHHHHHHCCCCGGGCCS-EEEEEEE-CCSSSCEEEEEEEESSHHHHHHHGGGST
T ss_pred HHHHHcCC-C-ccccCCCCcchHHHHHHHHHheEEEcccchhh-hhhccee-ccCCCCCcceEEEECCeehhCchhcCCh
Confidence 99988763 3 35667888899999999999999997655532 2222221 23443 4566664 567999999999
Q ss_pred cccCCCCCCCCC----CCCCC----CccccccCCccccCCCCCCCCCCCCCCCCCCCCC-------------CCCCCccC
Q 007655 403 KLLVPDVYPPPP----RSWFN----DYEDMLEDTWHTDFPRRSDISDNFYPGINVGLPM-------------WESYPVLT 461 (594)
Q Consensus 403 ~~~~~e~~~~p~----~~~~~----~~ed~~~d~~~~~~~~r~~~~E~lfp~~~~~~~~-------------~~~~~~~~ 461 (594)
.++..+...... +.+++ .|++.++|+.++.-. .......++.....+.. .+..+...
T Consensus 389 ei~~~~~~~~~~~~~~~~~~~~s~d~y~~~~nd~~S~~q~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (655)
T 4am6_A 389 QIFKLIRTSSHKNSSLEFQLPESRDLFTNELNDWNSLSQF--ESKEGNLYCDLNDDLKILNRILDAHNIIDQLQDKPENY 466 (655)
T ss_dssp HHHHHTSCCCCCCHHHHTTSCCCBCTTTCCBCSCCCHHHH--HHHTTCCGGGCCSHHHHHHHHHHHHHHHHHHHTSSCSC
T ss_pred hhcccccccccccchhhhhcCccccccCCCCCCccchhHH--hhhccccCCCCccHhhhhhhhhcccccccccccCCccc
Confidence 999755432211 12333 244455554443100 00000011100000000 00000000
Q ss_pred CCCCcccCCCHHHHHHHHHhccCC-hhHH--HHHhcCeEEEcCCCCcCChHHHHHHHHhhhCCCCC--------------
Q 007655 462 TKPKKEEKIGLAEAVTSSILSTGR-IDLQ--RKLFCSIQLIGGVALTGGLIPAVEERVLHAIPSNE-------------- 524 (594)
Q Consensus 462 ~~~~~~~~~~L~~~I~~sI~~~~~-~d~r--~~L~~nIvL~GG~S~ipGf~eRL~~eL~~~~p~~~-------------- 524 (594)
........+||++||++||.++|. .|.+ ++||+||+||||||+||||+..|++||....|...
T Consensus 467 ~~~~~~~~~pLdkAIi~SIt~a~~~~d~~k~~~~y~nilivGggski~g~~~~L~dri~i~rp~~~s~~~~~~~~~~~~~ 546 (655)
T 4am6_A 467 GNTLKENFAPLEKAIVQSIANASITADVTRMNSFYSNILIVGGSSKIPALDFILTDRINIWRPSLLSSASFPQFYKKLTK 546 (655)
T ss_dssp SCSSCCCCCCHHHHHHHHHHHHHHTSCGGGHHHHHTCEEEESTTCCCTTHHHHHHHHHHHHSCSTTTBTTHHHHHHHHHH
T ss_pred ccccccccccHHHHHHHHHHhhhccccHHHHHHHhhcEEEEcCcccCccHHHHHHHHHHhhCcccccccccHHHHHHHHH
Confidence 011113467999999999995432 3655 59999999999999999999999999987555321
Q ss_pred --------------------------------------------------CcceEEEcC--CCCCCceeEEeceeeeccc
Q 007655 525 --------------------------------------------------AIDMVEVLQ--SRTNPTYVSWKGGAVLGIL 552 (594)
Q Consensus 525 --------------------------------------------------~~~~V~v~~--~~~dp~~~aW~GgSIla~L 552 (594)
.+-+|+|++ +++||++++|+||||||+|
T Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~V~~~p~~~d~~~~~W~GgSvla~l 626 (655)
T 4am6_A 547 EIKDLEGHYVNAPDKTEDENKQILQAQIKEKIVEELEEQHQNIEHQNGNEHIFPVSIIPPPRDMNPALIIWKGASVLAQI 626 (655)
T ss_dssp HHHHHHSTTCSCCSSSCCSSTTSTTHHHHHHHHHHHHHHHHHHHHTTSCCCBCCCCEECCCTTSCGGGHHHHHHHHHTTS
T ss_pred hhhhhhhhhccccccccccchhhhhhhhhhhhhhhhhhhhhhhhhccccCCceeeEEeCCccccCcceeEEecceeeeec
Confidence 011356665 4478999999999999999
Q ss_pred CCccccceeHHHHHHcCCCeeeeccc
Q 007655 553 DFGRDAWIHREDWIRNGIHIGSGRKY 578 (594)
Q Consensus 553 ~sf~~~wITr~eyee~G~~il~~K~~ 578 (594)
++|++||||++||+|+|++||++||+
T Consensus 627 ~~f~e~wIt~~Eyde~G~~il~~k~~ 652 (655)
T 4am6_A 627 KLVEELFITNSDWDVHGSRILQYKCI 652 (655)
T ss_dssp HHHHHHCEEHHHHHHHGGGGGGTSCS
T ss_pred ccHhheeecHHHHhhhcchheEeccc
Confidence 99999999999999999999999985
No 3
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.5e-69 Score=585.09 Aligned_cols=377 Identities=20% Similarity=0.292 Sum_probs=275.0
Q ss_pred CceEEccccccCCCCCCceEEcceecCeeeecCCCChhhcHHHHHHHHHHHHhhhcCCCCCCCcccceeeecCCCCChHH
Q 007655 172 REFICGEEALRVSPTEPYCIHRPIRRGHLNISQHYPMQQVLEDLYAIWDWILTEKLHIPRSERNLYSAILVLPESFDNRE 251 (594)
Q Consensus 172 ~~~~vGdeAl~~~~~~~~~l~~Pi~~G~~n~~~~~s~~~~~~dle~iw~~~l~~~L~i~~~d~~~y~~VLvip~~~~~~~ 251 (594)
++++||+++.... +..+.++|||++|.+. ||+++|.||+|+|.+.|++.+.++. +|||++++++++.
T Consensus 62 ~~~~vG~e~~~~~-r~~l~l~~Pi~~GvI~---------dwd~~E~iw~~~f~~~L~v~p~~~~---pvlltep~~n~~~ 128 (498)
T 3qb0_A 62 NKKIFSEQSIGIP-RKDYELKPIIENGLVI---------DWDTAQEQWQWALQNELYLNSNSGI---PALLTEPVWNSTE 128 (498)
T ss_dssp CCEECCTTGGGSC-CTTEEEEESEETTEES---------CHHHHHHHHHHHHHHTSCCSCCTTC---CEEEEECTTCCHH
T ss_pred ccEEEecHHHhcC-cCceEEeccCcCCEEc---------cHHHHHHHHHHHHHhhhCCCcccCC---ceEEEeCCCCcHH
Confidence 3467999754432 4689999999999998 9999999999999889999888772 5899999998887
Q ss_pred HHH-HHHHHHHhcCCCeEEEeehhhHHhhhcCCceEEEEEeCCCceEEEEeeCCeeccCCcEEecchHHHHHHHHHHHHH
Q 007655 252 IKE-MLSIVLRDLRFASAVVHQEGLAAVFGNGLSTACVVNMGAQVTSVICVEDGVALPNTEKTLPFGGEDISRCLLWTQR 330 (594)
Q Consensus 252 vr~-l~ellfE~~~f~~v~~~~esvla~ygaG~stg~VVDiG~~~TsV~pV~dG~vl~~s~~~l~~GG~dit~~l~~lL~ 330 (594)
.|+ |+++|||.|||++++++.+++||+||+|++||||||+|++.|+|+||+||+++++++.++++||+++|++|.++|+
T Consensus 129 ~Re~~~eilFE~f~vpav~l~~~~vlalya~G~~tglVVDiG~g~T~vvPI~~G~~l~~ai~rl~vgG~~lt~~L~~lL~ 208 (498)
T 3qb0_A 129 NRKKSLEVLLEGMQFEACYLAPTSTCVSFAAGRPNCLVVDIGHDTCSVSPIVDGMTLSKSTRRNFIAGKFINHLIKKALE 208 (498)
T ss_dssp HHHHHHHHHHTTSCCSEEEEEEHHHHHHHHHTCSSEEEEEECSSCEEEEEEETTEECGGGCEEESCSHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhhcCCCeEeecchHHHHHHHcCCCeEEEEEcCCCcEEEEEEeCCEEccccceeccccHHHHHHHHHHHHH
Confidence 774 9999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hcCCCCCcc-----------cccc------cchh-hHHHHHHHHHhcccccCC-cccc------ceeeecccCCCCCCCc
Q 007655 331 HHQTWPQIR-----------TDIL------TKAM-DLLMLNRIKESYCEIKEG-EIDA------VAVVHSYEDGMPPGSH 385 (594)
Q Consensus 331 ~~~~~p~~~-----------~~~l------~~~~-d~~l~e~lKe~~c~v~~~-~~~~------~~~~~~~~~~~p~~~~ 385 (594)
..+..|.|. .+.+ .+.. +.+++++|||++|||+.+ +.+. ......|+ +||++.
T Consensus 209 ~~~i~P~~~i~~k~~~~~~~~~~~~~~~s~~~~~~~~~iv~~iKE~~c~Va~~~~~~~~~~~~~~~~~~~ye--LPDG~~ 286 (498)
T 3qb0_A 209 PKEIIPLFAIKQRKPEFIKKTFDYEVDKSLYDYANNRGFFQECKETLCHICPTKTLEETKTELSSTAKRSIE--SPWNEE 286 (498)
T ss_dssp TSCCCCSTTEEECSSSCEECCCSSCCCHHHHHHHHHHTHHHHHHHHTCCCCSSCHHHHHHHHHHTCCCEEEE--CSSSCE
T ss_pred hccccchhhhcccccccccccCCCccCccHHHHHHHHHHHHHHHHhhEEecCCccHhHHhhhccCcCceEEE--CCCCCE
Confidence 654333321 1111 1122 456999999999999874 2221 11233455 888764
Q ss_pred eeEee-e-eccCCCcCCCCcccCCCCCCCCCCCCCCCccccccCCccccC-CCCCCCCCCCC-CCCCCCCC--CCCCCCc
Q 007655 386 KTRLI-A-LNVPPMGLFYPKLLVPDVYPPPPRSWFNDYEDMLEDTWHTDF-PRRSDISDNFY-PGINVGLP--MWESYPV 459 (594)
Q Consensus 386 k~~~~-~-~~~aP~~lf~p~~~~~e~~~~p~~~~~~~~ed~~~d~~~~~~-~~r~~~~E~lf-p~~~~~~~--~~~~~~~ 459 (594)
. .+. + ...+|+.||+|.++...... |... .....+.. -.. +.+.. .+... ........ ..+.++.
T Consensus 287 i-~lg~E~Rf~~pE~LF~P~~~g~~~~~-~~~~-----~~~~~~~~-~~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 357 (498)
T 3qb0_A 287 I-VFDNETRYGFAEELFLPKEDDIPANW-PRSN-----SGVVKTWR-NDYVPLKRT-KPSGVNKSDKKVTPTEEKEQEAV 357 (498)
T ss_dssp E-EECHHHHHHHHHTTTSCCGGGSCTTS-CCCS-----SSCCCCCS-CCCCCCCBC-C----------------------
T ss_pred E-EECchHhhhCchhhCCHhHcCCcccc-cccc-----cccccccc-ccccccccc-ccccccccccccccccccccccc
Confidence 3 332 4 56789999999876321000 0000 00011111 000 00000 00000 00000000 0000000
Q ss_pred -------------------cC-----CCCCcccCCCHHHHHHHHHhccCChhHHHHHhcCeEEEcCCCCcCChHHHHHHH
Q 007655 460 -------------------LT-----TKPKKEEKIGLAEAVTSSILSTGRIDLQRKLFCSIQLIGGVALTGGLIPAVEER 515 (594)
Q Consensus 460 -------------------~~-----~~~~~~~~~~L~~~I~~sI~~~~~~d~r~~L~~nIvL~GG~S~ipGf~eRL~~e 515 (594)
.+ ......+..||+++|.+||++| |.|+|+.||+||+|+||+|++|||.+||++|
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~e~i~~sI~~c-d~d~r~~L~~nIvLsGGst~~pGf~~Rl~~E 436 (498)
T 3qb0_A 358 SKSTSPAANSADTPNETGKRPLEEEKPPKENNELIGLADLVYSSIMSS-DVDLRATLAHNVVLTGGTSSIPGLSDRLMTE 436 (498)
T ss_dssp -------------------------------CCSCCHHHHHHHHHHTS-CTTTHHHHHTTEEEESGGGGSTTHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccccccCCCchHHHHHHHHhC-CHHHHHHHhcCEEEeCCccCchhHHHHHHHH
Confidence 00 0000125689999999999999 9999999999999999999999999999999
Q ss_pred HhhhCCCCCCcceEEEcCC--CCCCceeEEeceeeecccCCccccceeHHHHHHcCC-Ceeeecc
Q 007655 516 VLHAIPSNEAIDMVEVLQS--RTNPTYVSWKGGAVLGILDFGRDAWIHREDWIRNGI-HIGSGRK 577 (594)
Q Consensus 516 L~~~~p~~~~~~~V~v~~~--~~dp~~~aW~GgSIla~L~sf~~~wITr~eyee~G~-~il~~K~ 577 (594)
|..+.| ..+ |+|... +.+|.+++|+||||||+|++|++|||||+||+|.|+ +|++|||
T Consensus 437 l~~l~p-~~~---i~v~~~~~~~er~~s~WiGgsilasl~~f~~~witk~EY~E~G~~~iv~~kc 497 (498)
T 3qb0_A 437 LNKILP-SLK---FRILTTGHTIERQYQSWLGGSILTSLGTFHQLWVGKKEYEEVGVERLLNDRF 497 (498)
T ss_dssp HHHHST-TSC---CCEECCSCTGGGGSHHHHHHHHHHTCHHHHHTSEEHHHHHTTCCHHHHHHTT
T ss_pred HHHhCC-CCe---eEEEcCCCCCccCccEEcccEEEecCcchhceEEEHHHHhhhCcHhhccccC
Confidence 999999 544 455542 268999999999999999999999999999999999 9999988
No 4
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.9e-68 Score=574.33 Aligned_cols=326 Identities=20% Similarity=0.305 Sum_probs=262.0
Q ss_pred CceEEccccccCCCCCCceEEcceecCeeeecCCCChhhcHHHHHHHHHHHHhhhcCCCCCCCcccceeeecCCCCChHH
Q 007655 172 REFICGEEALRVSPTEPYCIHRPIRRGHLNISQHYPMQQVLEDLYAIWDWILTEKLHIPRSERNLYSAILVLPESFDNRE 251 (594)
Q Consensus 172 ~~~~vGdeAl~~~~~~~~~l~~Pi~~G~~n~~~~~s~~~~~~dle~iw~~~l~~~L~i~~~d~~~y~~VLvip~~~~~~~ 251 (594)
++++||+||+... ...+.++|||++|.+. |||++|.||+|+|++.|++++.++ +||++++++++..
T Consensus 72 ~~~~vG~ea~~~~-~~~l~~~~Pi~~GvI~---------dwd~~e~iw~~~~~~~L~v~~~~~----pvlltep~~~~~~ 137 (427)
T 3dwl_A 72 LDFFIGNDALKKA-SAGYSLDYPIRHGQIE---------NWDHMERFWQQSLFKYLRCEPEDH----YFLLTEPPLNPPE 137 (427)
T ss_dssp SCCEETHHHHHTH-HHHCCCCCSEETTEEC---------CHHHHHHHHHHHHHTTSCCCGGGC----EEEEEECTTCCHH
T ss_pred CCeEEchHHhhCc-ccCcEEecCcccCeec---------cHHHHHHHHHHHHhHhhCCCCcCC----cEEEEcCCCCCHH
Confidence 5789999999865 2378999999999998 999999999999999999998887 7999999998888
Q ss_pred HHH-HHHHHHHhcCCCeEEEeehhhHHhhhcC--------CceEEEEEeCCCceEEEEeeCCeeccCCcEEecchHHHHH
Q 007655 252 IKE-MLSIVLRDLRFASAVVHQEGLAAVFGNG--------LSTACVVNMGAQVTSVICVEDGVALPNTEKTLPFGGEDIS 322 (594)
Q Consensus 252 vr~-l~ellfE~~~f~~v~~~~esvla~ygaG--------~stg~VVDiG~~~TsV~pV~dG~vl~~s~~~l~~GG~dit 322 (594)
.|+ ++|++||.||||+++++.+++||+||+| .+||||||+|++.|+|+||+||+++.+++.++++||+++|
T Consensus 138 ~re~~~ei~FE~~~~p~v~l~~~~vla~~a~G~~~~~~~~~~tglVVDiG~g~T~v~PV~~G~~l~~~~~rl~~gG~~lt 217 (427)
T 3dwl_A 138 NRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLTGTVVDSGDGVTHIIPVAEGYVIGSSIKTMPLAGRDVT 217 (427)
T ss_dssp HHHHHHHHHTTTTCCSEEEEEEHHHHHHHGGGGSTTTCSCCCCEEEEEESSSCEEEEEEETTEECGGGCEEESCCHHHHH
T ss_pred HHHHHHHHHHHhccCceeeecchHHHHHHhcCCcccccCCCceEEEEECCCCceEEEEEECCEEehhhheeccccHHHHH
Confidence 775 9999999999999999999999999999 6899999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCcccccccchhhHHHHHHHHHhcccccCCccccceeeecccCCCCCCCceeEeeeeccCCCcCCCC
Q 007655 323 RCLLWTQRHHQTWPQIRTDILTKAMDLLMLNRIKESYCEIKEGEIDAVAVVHSYEDGMPPGSHKTRLIALNVPPMGLFYP 402 (594)
Q Consensus 323 ~~l~~lL~~~~~~p~~~~~~l~~~~d~~l~e~lKe~~c~v~~~~~~~~~~~~~~~~~~p~~~~k~~~~~~~~aP~~lf~p 402 (594)
++|.++|+.++. . ..+.+++++|||++|||+.+... ....+.. .+.. ++...+.
T Consensus 218 ~~L~~lL~~~~~-------~---~~~~~~~~~IKe~~cyv~~d~~~---e~~~~~~-~~~~-----~~~~~l~------- 271 (427)
T 3dwl_A 218 YFVQSLLRDRNE-------P---DSSLKTAERIKEECCYVCPDIVK---EFSRFDR-EPDR-----YLKYASE------- 271 (427)
T ss_dssp HHHHHTTC------------------CHHHHHHHHHHCCCCSCHHH---HHHHTTC-----------CCBCC--------
T ss_pred HHHHHHHHHcCC-------C---chhHHHHHHHHHhcCcccCCHHH---HHHHhhc-Cccc-----cceeEee-------
Confidence 999999876642 1 35678999999999999864110 0011110 1100 0000000
Q ss_pred cccCCCCCCCCCCCCCCCccccccCCc--cccCC-CCCCCCCCCC-CCCCCCCCCCCCCCccCCCCCccc-CCCHHHHHH
Q 007655 403 KLLVPDVYPPPPRSWFNDYEDMLEDTW--HTDFP-RRSDISDNFY-PGINVGLPMWESYPVLTTKPKKEE-KIGLAEAVT 477 (594)
Q Consensus 403 ~~~~~e~~~~p~~~~~~~~ed~~~d~~--~~~~~-~r~~~~E~lf-p~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~~I~ 477 (594)
.+++. .+.++ +||.++|.|| |+..+ .+ ..||+++|.
T Consensus 272 ----------------------~~~g~~~~i~ig~erf~~pE~LF~P~~~g-----------------~~~~~gI~~~i~ 312 (427)
T 3dwl_A 272 ----------------------SITGHSTTIDVGFERFLAPEIFFNPEIAS-----------------SDFLTPLPELVD 312 (427)
T ss_dssp ------------------------------CBCCTHHHHSGGGGTCGGGTC-----------------SSCCSCHHHHHH
T ss_pred ----------------------CCCCCeeEEEEChHhhhChhhccCchhcC-----------------CccCCCccHHHH
Confidence 01111 23333 6899999999 65544 23 469999999
Q ss_pred HHHhccCChhHHHHHhcCeEEEcCCCCcCChHHHHHHHHhhhCCCCC-----------CcceEEEcCCCCCCceeEEece
Q 007655 478 SSILSTGRIDLQRKLFCSIQLIGGVALTGGLIPAVEERVLHAIPSNE-----------AIDMVEVLQSRTNPTYVSWKGG 546 (594)
Q Consensus 478 ~sI~~~~~~d~r~~L~~nIvL~GG~S~ipGf~eRL~~eL~~~~p~~~-----------~~~~V~v~~~~~dp~~~aW~Gg 546 (594)
+||++| |+|+|++||+||+|+||+|++|||.+||++||+.+.|... .--+|+|.. +.+|++++|+||
T Consensus 313 ~sI~~c-~~dlr~~L~~nIvLtGG~sl~~G~~~RL~~El~~l~~~~~~~~~~~~~~~p~~~~vkv~~-~~~r~~s~WiGG 390 (427)
T 3dwl_A 313 NVVQSS-PIDVRKGLYKNIVLSGGSTLFKNFGNRLQRDLKRIVDERIHRSEMLSGAKSGGVDVNVIS-HKRQRNAVWFGG 390 (427)
T ss_dssp HHHHTS-CHHHHHHHHHCEEEESGGGCSTTTTHHHHHHHHHHHTTC-------------CCCCCEEC-CTTCTTHHHHHH
T ss_pred HHHHhC-CHHHHHHHhCCEEEEccCcCCCChHHHHHHHHHHhhhhhccccccccccCCCceeEEEec-CCccccceecCc
Confidence 999999 9999999999999999999999999999999998874311 001456665 358999999999
Q ss_pred eeecccCCccccceeHHHHHHcCCCeeeeccc
Q 007655 547 AVLGILDFGRDAWIHREDWIRNGIHIGSGRKY 578 (594)
Q Consensus 547 SIla~L~sf~~~wITr~eyee~G~~il~~K~~ 578 (594)
||||+|++|+++||||+||+|+|++|++||+.
T Consensus 391 Silasl~~f~~~witk~EYeE~G~~iv~~~~~ 422 (427)
T 3dwl_A 391 SLLAQTPEFGSYCHTKADYEEYGASIARRYQI 422 (427)
T ss_dssp HHHHHSTTHHHHSEEHHHHHHSCGGGGSCCCC
T ss_pred eeeccccchhheeEEHHHHhhhChHhheeccc
Confidence 99999999999999999999999999998864
No 5
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=100.00 E-value=2.4e-61 Score=514.85 Aligned_cols=322 Identities=19% Similarity=0.373 Sum_probs=261.6
Q ss_pred CceEEccccccCCCCCCceEEcceecCeeeecCCCChhhcHHHHHHHHHHHHhhhcCCCCCCCcccceeeecCCCCChHH
Q 007655 172 REFICGEEALRVSPTEPYCIHRPIRRGHLNISQHYPMQQVLEDLYAIWDWILTEKLHIPRSERNLYSAILVLPESFDNRE 251 (594)
Q Consensus 172 ~~~~vGdeAl~~~~~~~~~l~~Pi~~G~~n~~~~~s~~~~~~dle~iw~~~l~~~L~i~~~d~~~y~~VLvip~~~~~~~ 251 (594)
++++||++|...+ ..+.++|||++|.+. ||+++|.||+|+|++.|+++++++ +|+++++++.+..
T Consensus 50 ~~~~vG~~a~~~~--~~~~~~~Pi~~G~i~---------d~d~~e~i~~~~~~~~L~~~~~~~----~vvit~p~~~~~~ 114 (375)
T 2fxu_A 50 KDSYVGDEAQSKR--GILTLKYPIEHGIIT---------NWDDMEKIWHHTFYNELRVAPEEH----PTLLTEAPLNPKA 114 (375)
T ss_dssp -CCEEHHHHHHHT--TSEEEECSEETTEEC---------CHHHHHHHHHHHHHTTSCCCGGGS----CEEEEECTTCCHH
T ss_pred CCeEechhHhhcC--cccceeccccCCccc---------CHHHHHHHHHHHHHHhcCCCCcCC----cEEEEeCCCCcHH
Confidence 4578999998874 569999999999998 999999999999988999988776 5888888877766
Q ss_pred HHH-HHHHHHHhcCCCeEEEeehhhHHhhhcCCceEEEEEeCCCceEEEEeeCCeeccCCcEEecchHHHHHHHHHHHHH
Q 007655 252 IKE-MLSIVLRDLRFASAVVHQEGLAAVFGNGLSTACVVNMGAQVTSVICVEDGVALPNTEKTLPFGGEDISRCLLWTQR 330 (594)
Q Consensus 252 vr~-l~ellfE~~~f~~v~~~~esvla~ygaG~stg~VVDiG~~~TsV~pV~dG~vl~~s~~~l~~GG~dit~~l~~lL~ 330 (594)
.|+ +++++||.+|+++++++++++||+||+|++++||||+|+++|+|+||+||+++.++..++++||+++|++|.++|.
T Consensus 115 ~r~~~~e~~fe~~g~~~~~~~~e~~aaa~a~g~~~~lVvDiG~gtt~v~~v~~G~~~~~~~~~~~~GG~~lt~~l~~~l~ 194 (375)
T 2fxu_A 115 NREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILT 194 (375)
T ss_dssp HHHHHHHHHHHTTCCSEEEEEEHHHHHHHHTTCSSEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCcceEEEccchheeeeecCCCeEEEEEcCCCceEEeEeECCEEeccceEEeccCHHHHHHHHHHHHH
Confidence 665 9999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hcCCCCCcccccccchhhHHHHHHHHHhcccccCCccccceeeecccCCCCCC-CceeEeeeeccCCCcCCCCcccCCCC
Q 007655 331 HHQTWPQIRTDILTKAMDLLMLNRIKESYCEIKEGEIDAVAVVHSYEDGMPPG-SHKTRLIALNVPPMGLFYPKLLVPDV 409 (594)
Q Consensus 331 ~~~~~p~~~~~~l~~~~d~~l~e~lKe~~c~v~~~~~~~~~~~~~~~~~~p~~-~~k~~~~~~~~aP~~lf~p~~~~~e~ 409 (594)
.++. ++....+...+++||+++|+++.+.... ..... ...+ ...+.
T Consensus 195 ~~~~-------~~~~~~~~~~~e~iK~~~~~v~~~~~~e---~~~~~--~~~~~~~~~~--------------------- 241 (375)
T 2fxu_A 195 ERGY-------SFVTTAEREIVRDIKEKLCYVALDFENE---MATAA--SSSSLEKSYE--------------------- 241 (375)
T ss_dssp HHTC-------CCCSHHHHHHHHHHHHHHCCCCSSHHHH---HHHHH--HCSTTCEEEE---------------------
T ss_pred hcCC-------CCCcHHHHHHHHHHHHHHHhhcccHHHH---HHhhc--ccCccCeEEE---------------------
Confidence 7642 3444567889999999999997531100 00000 0000 00010
Q ss_pred CCCCCCCCCCCccccccCCccccCC-CCCCCCCCCC-CCCCCCCCCCCCCCccCCCCCcccCCCHHHHHHHHHhccCChh
Q 007655 410 YPPPPRSWFNDYEDMLEDTWHTDFP-RRSDISDNFY-PGINVGLPMWESYPVLTTKPKKEEKIGLAEAVTSSILSTGRID 487 (594)
Q Consensus 410 ~~~p~~~~~~~~ed~~~d~~~~~~~-~r~~~~E~lf-p~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~I~~sI~~~~~~d 487 (594)
++|+..+.++ +|+.++|.|| |...+ .+..+|+++|.++|.+| +.|
T Consensus 242 ---------------lpdg~~i~i~~erf~~~E~lf~p~~~~-----------------~~~~~i~~~i~~~i~~~-~~~ 288 (375)
T 2fxu_A 242 ---------------LPDGQVITIGNERFRCPETLFQPSFIG-----------------MESAGIHETTYNSIMKC-DID 288 (375)
T ss_dssp ---------------CTTSCEEEESTHHHHHHHTTTCGGGGT-----------------CCSCCHHHHHHHHHHTS-CHH
T ss_pred ---------------CCCCCEEEEChhheechHhhCCCccCC-----------------CCCCCHHHHHHHHHHhC-CHH
Confidence 1122223233 5777888888 55443 35679999999999999 899
Q ss_pred HHHHHhcCeEEEcCCCCcCChHHHHHHHHhhhCCCCCCcceEEEcCCCCCCceeEEeceeeecccCCccccceeHHHHHH
Q 007655 488 LQRKLFCSIQLIGGVALTGGLIPAVEERVLHAIPSNEAIDMVEVLQSRTNPTYVSWKGGAVLGILDFGRDAWIHREDWIR 567 (594)
Q Consensus 488 ~r~~L~~nIvL~GG~S~ipGf~eRL~~eL~~~~p~~~~~~~V~v~~~~~dp~~~aW~GgSIla~L~sf~~~wITr~eyee 567 (594)
+|+++++||+|+||+|++|||.+||++||..+.|...++ +|.. +.+|.+++|+|||++|++++|+++||||+||+|
T Consensus 289 ~~~~l~~~IvLtGG~s~~pG~~~rl~~el~~~~p~~~~v---~v~~-~~~p~~~~w~G~si~a~l~~f~~~~itk~ey~e 364 (375)
T 2fxu_A 289 IRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKI---KIIA-PPERKYSVWIGGSILASLSTFQQMWITKQEYDE 364 (375)
T ss_dssp HHHHHHTCEEEESGGGCSTTHHHHHHHHHHHHSCTTCCC---CEEC-CTTTTSHHHHHHHHHHHCGGGGGGSEEHHHHHH
T ss_pred HHHHHHhCcEeeCCCCCCccHHHHHHHHHHHhCCCCeeE---EEEc-CCCCCccEEcchHHhhCcccHhhceeeHHHHhh
Confidence 999999999999999999999999999999998876543 4443 358999999999999999999999999999999
Q ss_pred cCCCeeeeccc
Q 007655 568 NGIHIGSGRKY 578 (594)
Q Consensus 568 ~G~~il~~K~~ 578 (594)
+|+++++|||+
T Consensus 365 ~G~~~~~~k~~ 375 (375)
T 2fxu_A 365 AGPSIVHRKCF 375 (375)
T ss_dssp HCGGGGC----
T ss_pred hChHHHhhhcc
Confidence 99999999986
No 6
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=100.00 E-value=8.5e-63 Score=529.32 Aligned_cols=320 Identities=21% Similarity=0.381 Sum_probs=133.1
Q ss_pred CceEEccccccCCCCCCceEEcceecCeeeecCCCChhhcHHHHHHHHHHHH-hhhcCCCCCCCcccceeeecCCCCChH
Q 007655 172 REFICGEEALRVSPTEPYCIHRPIRRGHLNISQHYPMQQVLEDLYAIWDWIL-TEKLHIPRSERNLYSAILVLPESFDNR 250 (594)
Q Consensus 172 ~~~~vGdeAl~~~~~~~~~l~~Pi~~G~~n~~~~~s~~~~~~dle~iw~~~l-~~~L~i~~~d~~~y~~VLvip~~~~~~ 250 (594)
++++||++|...+ ..+.+++||++|.+. ||++++.||+|+| ++.|+++++++ +||++++++++.
T Consensus 53 ~~~~vG~ea~~~~--~~~~~~~Pi~~G~i~---------dwd~~e~i~~~~~~~~~L~~~~~~~----~vllt~p~~~~~ 117 (394)
T 1k8k_B 53 KDLMVGDEASELR--SMLEVNYPMENGIVR---------NWDDMKHLWDYTFGPEKLNIDTRNC----KILLTEPPMNPT 117 (394)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCeEEChHHHhcC--CCceeeccccCCEEe---------cHHHHHHHHHHHhcccccCcCCCCC----cEEEEECCCCCH
Confidence 4678999998874 578999999999998 9999999999999 88999988887 688888888777
Q ss_pred HHHH-HHHHHHHhcCCCeEEEeehhhHHhhhcCCceEEEEEeCCCceEEEEeeCCeeccCCcEEecchHHHHHHHHHHHH
Q 007655 251 EIKE-MLSIVLRDLRFASAVVHQEGLAAVFGNGLSTACVVNMGAQVTSVICVEDGVALPNTEKTLPFGGEDISRCLLWTQ 329 (594)
Q Consensus 251 ~vr~-l~ellfE~~~f~~v~~~~esvla~ygaG~stg~VVDiG~~~TsV~pV~dG~vl~~s~~~l~~GG~dit~~l~~lL 329 (594)
..|+ +++++||.|||++++++.+++||+||+|+++|||||+|+++|+|+||+||+++.++..++++||+++|++|.++|
T Consensus 118 ~~r~~~~e~~fe~~~~~~~~~~~~~~~a~~a~g~~~~lVVDiG~g~T~v~pv~~G~~~~~~~~~~~~GG~~lt~~l~~~l 197 (394)
T 1k8k_B 118 KNREKIVEVMFETYQFSGVYVAIQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFSLPHLTRRLDIAGRDITRYLIKLL 197 (394)
T ss_dssp ------------------------------------CCEEEECSSCEEEECEETTEECSTTCEEESCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhccCCCeEEEEhhHHHHHHhCCCceEEEEEcCCCceEeeeeECCEEcccceEEeeccHHHHHHHHHHHH
Confidence 6665 999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCCCcccccccchhhHHHHHHHHHhcccccCCccccceeeecccCCCCCCCceeEeeeeccCCCcCCCCcccCCCC
Q 007655 330 RHHQTWPQIRTDILTKAMDLLMLNRIKESYCEIKEGEIDAVAVVHSYEDGMPPGSHKTRLIALNVPPMGLFYPKLLVPDV 409 (594)
Q Consensus 330 ~~~~~~p~~~~~~l~~~~d~~l~e~lKe~~c~v~~~~~~~~~~~~~~~~~~p~~~~k~~~~~~~~aP~~lf~p~~~~~e~ 409 (594)
+.++. ++.+..+++.+++||+++|+++.+.......... ..+. ...+.
T Consensus 198 ~~~~~-------~~~~~~~~~~ae~iK~~~~~v~~d~~~~~~~~~~-~~~~---~~~~~--------------------- 245 (394)
T 1k8k_B 198 LLRGY-------AFNHSADFETVRMIKEKLCYVGYNIEQEQKLALE-TTVL---VESYT--------------------- 245 (394)
T ss_dssp HHTTC-------CCCTTTTHHHHHHHHHHHCCCCSSHHHHHHHHHH-CSTT---CEEEE---------------------
T ss_pred HhcCC-------CCCcHHHHHHHHHHHHhheeEecCHHHHHHhhcc-CCcC---ceEEE---------------------
Confidence 87642 3444568899999999999997531100000000 0000 00010
Q ss_pred CCCCCCCCCCCccccccCCccccCC-CCCCCCCCCC-CCCCCCCCCCCCCCccCCCCCcccCCCHHHHHHHHHhccCChh
Q 007655 410 YPPPPRSWFNDYEDMLEDTWHTDFP-RRSDISDNFY-PGINVGLPMWESYPVLTTKPKKEEKIGLAEAVTSSILSTGRID 487 (594)
Q Consensus 410 ~~~p~~~~~~~~ed~~~d~~~~~~~-~r~~~~E~lf-p~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~I~~sI~~~~~~d 487 (594)
++|+..+.++ +|+.++|.|| |...+ .+..+|+++|.++|.+| +.|
T Consensus 246 ---------------lpdg~~i~i~~erf~~~E~Lf~p~~~~-----------------~~~~~i~~~i~~~i~~~-~~d 292 (394)
T 1k8k_B 246 ---------------LPDGRIIKVGGERFEAPEALFQPHLIN-----------------VEGVGVAELLFNTIQAA-DID 292 (394)
T ss_dssp ---------------CTTSCEEEECTHHHHTGGGGTCGGGGT-----------------CCSCCHHHHHHHHHHHS-CTT
T ss_pred ---------------CCCCCEEEECchhhcChHhhCCchhcc-----------------CCCCCHHHHHHHHHHhC-CHH
Confidence 1122223233 5788899998 55443 35679999999999999 899
Q ss_pred HHHHHhcCeEEEcCCCCcCChHHHHHHHHhhhC-----------CCCCCcceEEEcCCCCCCceeEEeceeeecccCCcc
Q 007655 488 LQRKLFCSIQLIGGVALTGGLIPAVEERVLHAI-----------PSNEAIDMVEVLQSRTNPTYVSWKGGAVLGILDFGR 556 (594)
Q Consensus 488 ~r~~L~~nIvL~GG~S~ipGf~eRL~~eL~~~~-----------p~~~~~~~V~v~~~~~dp~~~aW~GgSIla~L~sf~ 556 (594)
+|++|++||+|+||+|++|||.+||++||..+. |... +|+|.. +.+|.+++|+||||+|+|++|+
T Consensus 293 ~r~~l~~nIvLtGG~s~~~G~~~rl~~el~~~~~~~~~~~~~~~p~~~---~v~v~~-~~~~~~~~w~Ggsilasl~~f~ 368 (394)
T 1k8k_B 293 TRSEFYKHIVLSGGSTMYPGLPSRLERELKQLYLERVLKGDVEKLSKF---KIRIED-PPRRKHMVFLGGAVLADIMKDK 368 (394)
T ss_dssp THHHHHTTCEEESGGGCSTTHHHHHHHHHHHHHHHHTCSSCCCTTCCC---CC---------------------------
T ss_pred HHHHHHhCEEEeCcccccccHHHHHHHHHHHHHhhhhcccccCCCCce---EEEEec-CCCcceeEEhhhHHhhCCcCCc
Confidence 999999999999999999999999999999876 5544 346654 3578999999999999999999
Q ss_pred -ccceeHHHHHHcCCCeeee
Q 007655 557 -DAWIHREDWIRNGIHIGSG 575 (594)
Q Consensus 557 -~~wITr~eyee~G~~il~~ 575 (594)
++||||+||+|+|+++++|
T Consensus 369 ~~~~itk~eY~e~G~~~~~~ 388 (394)
T 1k8k_B 369 DNFWMTRQEYQEKGVRVLEK 388 (394)
T ss_dssp --------------------
T ss_pred cceeecHHHHhhhCHHHHHh
Confidence 9999999999999999976
No 7
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=100.00 E-value=2.3e-57 Score=490.77 Aligned_cols=326 Identities=19% Similarity=0.292 Sum_probs=257.9
Q ss_pred CceEEccccccCCCCCCceEEcceecCeeeecCCCChhhcHHHHHHHHHHHHhhhcCCCCCCCcccceeeecCCCCChHH
Q 007655 172 REFICGEEALRVSPTEPYCIHRPIRRGHLNISQHYPMQQVLEDLYAIWDWILTEKLHIPRSERNLYSAILVLPESFDNRE 251 (594)
Q Consensus 172 ~~~~vGdeAl~~~~~~~~~l~~Pi~~G~~n~~~~~s~~~~~~dle~iw~~~l~~~L~i~~~d~~~y~~VLvip~~~~~~~ 251 (594)
++++||++|...+ ++.+++||++|.+. ||++++.||+|+|.+.|+++++++ +++++++++.+..
T Consensus 58 ~~~~vG~~a~~~~---~~~~~~pi~~G~i~---------d~d~~e~i~~~~~~~~L~~~~~~~----~vvit~p~~~~~~ 121 (418)
T 1k8k_A 58 LDFFIGDEAIEKP---TYATKWPIRHGIVE---------DWDLMERFMEQVIFKYLRAEPEDH----YFLLTEPPLNTPE 121 (418)
T ss_dssp GCEEEGGGGTSCT---TSEEECCEETTEES---------CHHHHHHHHHHHHHTTTCCCGGGC----CEEEEECTTCCHH
T ss_pred cCeEEChHHHhcC---CCEEeccccCCEEC---------CHHHHHHHHHHHHHhccCCCCCCC----cEEEEeCCCCCHH
Confidence 4689999999874 59999999999998 999999999999988899988776 5777777776666
Q ss_pred HH-HHHHHHHHhcCCCeEEEeehhhHHhhh---------cCCceEEEEEeCCCceEEEEeeCCeeccCCcEEecchHHHH
Q 007655 252 IK-EMLSIVLRDLRFASAVVHQEGLAAVFG---------NGLSTACVVNMGAQVTSVICVEDGVALPNTEKTLPFGGEDI 321 (594)
Q Consensus 252 vr-~l~ellfE~~~f~~v~~~~esvla~yg---------aG~stg~VVDiG~~~TsV~pV~dG~vl~~s~~~l~~GG~di 321 (594)
.| .+.+++||.+||++++++.+++||+|+ .|. +|||||+|+++|+|+||++|+++.++..++++||+++
T Consensus 122 ~r~~~~e~~fe~~g~~~~~l~~ep~aa~~a~~~~~~~~~~~~-~glVvDiG~gtt~v~~v~~G~~~~~~~~~~~lGG~~l 200 (418)
T 1k8k_A 122 NREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTL-TGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDI 200 (418)
T ss_dssp HHHHHHHHHHHTSCCSEEEEEEHHHHHHHHGGGSTTCCSCCC-CEEEEEESSSCEEEEEEETTEECGGGCEEESCSHHHH
T ss_pred HHHHHHHHHHHhcCCCEEEEechHHHHhhhhhcccccCCCCC-eEEEEEcCCCceEEEEeECCEEcccceEEEeCcHHHH
Confidence 55 599999999999999999999999999 576 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCcccccccchhhHHHHHHHHHhcccccCCccccceeeecccCCCCCC-CceeEeeeeccCCCcCC
Q 007655 322 SRCLLWTQRHHQTWPQIRTDILTKAMDLLMLNRIKESYCEIKEGEIDAVAVVHSYEDGMPPG-SHKTRLIALNVPPMGLF 400 (594)
Q Consensus 322 t~~l~~lL~~~~~~p~~~~~~l~~~~d~~l~e~lKe~~c~v~~~~~~~~~~~~~~~~~~p~~-~~k~~~~~~~~aP~~lf 400 (594)
|++|.++|..++. ++....++..++++|+++|++..+.... ...+.. .+.. ...+.+.. +.
T Consensus 201 t~~l~~~l~~~~~-------~~~~~~~~~~~e~iK~~~~~v~~~~~~e---~~~~~~-~~~~~~~~~~lpd------~~- 262 (418)
T 1k8k_A 201 TYFIQQLLRDREV-------GIPPEQSLETAKAVKERYSYVCPDLVKE---FNKYDT-DGSKWIKQYTGIN------AI- 262 (418)
T ss_dssp HHHHHHHHHTTCC-------CCCGGGHHHHHHHHHHHHCCCCSCHHHH---HHHHHH-SGGGTCEEEEEEC------TT-
T ss_pred HHHHHHHHHhcCC-------CCCCHHHHHHHHHHHHhhchhcccHHHH---HHhhcc-cccccceeEECCC------CC-
Confidence 9999999976542 2334467899999999999997531100 000000 0000 00111110 00
Q ss_pred CCcccCCCCCCCCCCCCCCCccccccCCccccCC-CCCCCCCCCC-CCCCCCCCCCCCCCccCCCCCccc-CCCHHHHHH
Q 007655 401 YPKLLVPDVYPPPPRSWFNDYEDMLEDTWHTDFP-RRSDISDNFY-PGINVGLPMWESYPVLTTKPKKEE-KIGLAEAVT 477 (594)
Q Consensus 401 ~p~~~~~e~~~~p~~~~~~~~ed~~~d~~~~~~~-~r~~~~E~lf-p~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~~I~ 477 (594)
.. ....+.++ +|+.++|.|| |...+ .+ ..+|+++|.
T Consensus 263 -----~~-------------------~~~~i~l~~erf~~~E~lF~P~~~~-----------------~~~~~~i~~~i~ 301 (418)
T 1k8k_A 263 -----SK-------------------KEFSIDVGYERFLGPEIFFHPEFAN-----------------PDFTQPISEVVD 301 (418)
T ss_dssp -----TC-------------------CEEEEEECTHHHHHHHTTTCGGGTC-----------------TTCCCCHHHHHH
T ss_pred -----CC-------------------cccEEEeChHHhhCcHhhCCCccCC-----------------CCCCCCHHHHHH
Confidence 00 00012222 4777788888 55433 12 368999999
Q ss_pred HHHhccCChhHHHHHhcCeEEEcCCCCcCChHHHHHHHHhhhC----------------CCCCCcceEEEcCCCCCCcee
Q 007655 478 SSILSTGRIDLQRKLFCSIQLIGGVALTGGLIPAVEERVLHAI----------------PSNEAIDMVEVLQSRTNPTYV 541 (594)
Q Consensus 478 ~sI~~~~~~d~r~~L~~nIvL~GG~S~ipGf~eRL~~eL~~~~----------------p~~~~~~~V~v~~~~~dp~~~ 541 (594)
++|.+| +.|+|+++++||+|+||+|++|||.+||++||...+ |... +|+|.. +.+|.++
T Consensus 302 ~si~~~-~~~~~~~l~~~IvL~GG~s~~pg~~~rl~~el~~~~~~~~~~~~~~~~~~~~p~~~---~v~v~~-~~~~~~~ 376 (418)
T 1k8k_A 302 EVIQNC-PIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPI---DVQVIT-HHMQRYA 376 (418)
T ss_dssp HHHHHS-CGGGTTHHHHCEEEESGGGCSTTHHHHHHHHHHHHHHHHHHHHHHHC----CCCCC---CCCEEC-CTTCTTH
T ss_pred HHHHcC-CHHHHHHHHhceEEeCCccccccHHHHHHHHHHHhhccccccccccccccCCCCce---eEEEeC-CCccccc
Confidence 999999 899999999999999999999999999999998875 3333 346664 3589999
Q ss_pred EEeceeeecccCCccccceeHHHHHHcCCCeeeeccc
Q 007655 542 SWKGGAVLGILDFGRDAWIHREDWIRNGIHIGSGRKY 578 (594)
Q Consensus 542 aW~GgSIla~L~sf~~~wITr~eyee~G~~il~~K~~ 578 (594)
+|+||||||+|++|+++||||+||+|+|+++++|||+
T Consensus 377 ~w~Ggsilasl~~f~~~~itk~ey~e~G~~~~~~~~~ 413 (418)
T 1k8k_A 377 VWFGGSMLASTPEFYQVCHTKKDYEEIGPSICRHNPV 413 (418)
T ss_dssp HHHHHHHHTTSHHHHHHSEEHHHHHHHCGGGGGCCCC
T ss_pred eeHhHHHHHcCccHhheEEEHHHHhhhCHHHHhhhcc
Confidence 9999999999999999999999999999999999764
No 8
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=99.95 E-value=3.9e-27 Score=247.44 Aligned_cols=280 Identities=16% Similarity=0.178 Sum_probs=192.7
Q ss_pred ceEEccccccCCCC--CCceEEcceecCeeeecCCCChhhcHHHHHHHHHHHHhhhcCCC-CCCCcccceeeecCCCCCh
Q 007655 173 EFICGEEALRVSPT--EPYCIHRPIRRGHLNISQHYPMQQVLEDLYAIWDWILTEKLHIP-RSERNLYSAILVLPESFDN 249 (594)
Q Consensus 173 ~~~vGdeAl~~~~~--~~~~l~~Pi~~G~~n~~~~~s~~~~~~dle~iw~~~l~~~L~i~-~~d~~~y~~VLvip~~~~~ 249 (594)
.++||++|.+.... .+..+.+|+++|.+. +|+.++.+|.+++.+..... ..+. ..|+-+|..|+.
T Consensus 41 ~~~vG~~A~~~~~~~~~~~~~~~p~~~g~i~---------~~~~~~~i~~~~l~~~~~~~~~~~~---~~vitvP~~~~~ 108 (344)
T 1jce_A 41 ILKVGLEAKNMIGKTPATIKAIRPMRDGVIA---------DYTVALVMLRYFINKAKGGMNLFKP---RVVIGVPIGITD 108 (344)
T ss_dssp EEEESHHHHTTTTCCCTTEEEECCEETTEES---------SHHHHHHHHHHHHHHHHTSCCSCCC---EEEEEECTTCCH
T ss_pred EEEEcHHHHHhcccCCCCeEEEecCCCCeeC---------ChHHHHHHHHHHHHHHhhccccCCC---eEEEEECCCCCH
Confidence 35788888765322 467788999999987 89999999999995433322 2222 244445555666
Q ss_pred HHHHHHHHHHHHhcCCCeEEEeehhhHHhhhcCC-----ceEEEEEeCCCceEEEEeeCCeeccCCcEEecchHHHHHHH
Q 007655 250 REIKEMLSIVLRDLRFASAVVHQEGLAAVFGNGL-----STACVVNMGAQVTSVICVEDGVALPNTEKTLPFGGEDISRC 324 (594)
Q Consensus 250 ~~vr~l~ellfE~~~f~~v~~~~esvla~ygaG~-----stg~VVDiG~~~TsV~pV~dG~vl~~s~~~l~~GG~dit~~ 324 (594)
.+.+.+.+ +++..|++.+.++.|++||+|++|. .+.+|||+|+++|.|+++..|.++. ...+++||+++|+.
T Consensus 109 ~~r~~~~~-a~~~aG~~~~~li~ep~Aaa~~~~~~~~~~~~~lVvDiGggttdvsv~~~~~~~~--~~~~~lGG~~id~~ 185 (344)
T 1jce_A 109 VERRAILD-AGLEAGASKVFLIEEPMAAAIGSNLNVEEPSGNMVVDIGGGTTEVAVISLGSIVT--WESIRIAGDEMDEA 185 (344)
T ss_dssp HHHHHHHH-HHHHTTCSEEEEEEHHHHHHHHTTCCTTSSSCEEEEEECSSCEEEEEEETTEEEE--EEEESCSHHHHHHH
T ss_pred HHHHHHHH-HHHHcCCCeEeccCCHHHHHHhcCCCCCCCceEEEEEeCCCeEEEEEEEcCCEEe--eCCCCccChhHHHH
Confidence 55434555 6899999999999999999999987 5799999999999999999998774 45789999999999
Q ss_pred HHHHHHhcCCCCCcccccccchhhHHHHHHHHHhcccccCCccccceeeecccCCCCCCC-ceeEeeeeccCCCcCCCCc
Q 007655 325 LLWTQRHHQTWPQIRTDILTKAMDLLMLNRIKESYCEIKEGEIDAVAVVHSYEDGMPPGS-HKTRLIALNVPPMGLFYPK 403 (594)
Q Consensus 325 l~~lL~~~~~~p~~~~~~l~~~~d~~l~e~lKe~~c~v~~~~~~~~~~~~~~~~~~p~~~-~k~~~~~~~~aP~~lf~p~ 403 (594)
|.+.+..+- .+ ..+...+|++|+++|+..................+.++. ....+..
T Consensus 186 l~~~l~~~~--------~~--~~~~~~ae~~K~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~------------ 243 (344)
T 1jce_A 186 IVQYVRETY--------RV--AIGERTAERVKIEIGNVFPSKENDELETTVSGIDLSTGLPRKLTLKG------------ 243 (344)
T ss_dssp HHHHHHHHH--------CE--ECCHHHHHHHHHHHCBCSCCHHHHHCEEEEEEEETTTTEEEEEEEEH------------
T ss_pred HHHHHHHHh--------Cc--ccCHHHHHHHHHHHhccCccccCCcceEEEeccccCCCCceeEEEeH------------
Confidence 998876431 11 134678999999999865421000000000000000110 0000000
Q ss_pred ccCCCCCCCCCCCCCCCccccccCCccccCCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCCcccCCCHHHHHHHHHhcc
Q 007655 404 LLVPDVYPPPPRSWFNDYEDMLEDTWHTDFPRRSDISDNFYPGINVGLPMWESYPVLTTKPKKEEKIGLAEAVTSSILST 483 (594)
Q Consensus 404 ~~~~e~~~~p~~~~~~~~ed~~~d~~~~~~~~r~~~~E~lfp~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~I~~sI~~~ 483 (594)
+++ +.+|. .....+.+.|.+++.++
T Consensus 244 -------------------------------~~~---~~~~~---------------------~~~~~i~~~i~~~l~~~ 268 (344)
T 1jce_A 244 -------------------------------GEV---REALR---------------------SVVVAIVESVRTTLEKT 268 (344)
T ss_dssp -------------------------------HHH---HHHTH---------------------HHHHHHHHHHHHHHHTS
T ss_pred -------------------------------HHH---HHHHH---------------------HHHHHHHHHHHHHHHhC
Confidence 000 00110 01235788999999998
Q ss_pred CChhHHHHHh-cCeEEEcCCCCcCChHHHHHHHHhhhCCCCCCcceEEEcCCCCCCceeEEeceeeecc-cCCccc
Q 007655 484 GRIDLQRKLF-CSIQLIGGVALTGGLIPAVEERVLHAIPSNEAIDMVEVLQSRTNPTYVSWKGGAVLGI-LDFGRD 557 (594)
Q Consensus 484 ~~~d~r~~L~-~nIvL~GG~S~ipGf~eRL~~eL~~~~p~~~~~~~V~v~~~~~dp~~~aW~GgSIla~-L~sf~~ 557 (594)
+.+++++++ ++|+|+||+|++|||.++|++++.. +|.+. .+|.+++|+||+++|. +++|++
T Consensus 269 -~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~~~~---------~v~~~---~~p~~ava~Gaa~~a~~~~~~~~ 331 (344)
T 1jce_A 269 -PPELVSDIIERGIFLTGGGSLLRGLDTLLQKETGI---------SVIRS---EEPLTAVAKGAGMVLDKVNILKK 331 (344)
T ss_dssp -CHHHHHHHHHHCEEEESGGGCSBTHHHHHHHHHSS---------CEEEC---SSTTTHHHHHHHHGGGCHHHHTT
T ss_pred -CchhccchhhCcEEEECccccchHHHHHHHHHHCC---------Ccccc---CChHHHHHHHHHHHHhChHHHHH
Confidence 788888888 7999999999999999999999852 23443 4788999999999998 466643
No 9
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.68 E-value=3.7e-17 Score=165.47 Aligned_cols=214 Identities=17% Similarity=0.149 Sum_probs=155.6
Q ss_pred EcceecCeeeecCCCChhhcHHHHHHHHHHHHhhhcCCCCCCCcccceeeecCCCCChHHHHHHHHHHHHhcCCCeEEEe
Q 007655 192 HRPIRRGHLNISQHYPMQQVLEDLYAIWDWILTEKLHIPRSERNLYSAILVLPESFDNREIKEMLSIVLRDLRFASAVVH 271 (594)
Q Consensus 192 ~~Pi~~G~~n~~~~~s~~~~~~dle~iw~~~l~~~L~i~~~d~~~y~~VLvip~~~~~~~vr~l~ellfE~~~f~~v~~~ 271 (594)
..|+++|.+. +|+.++.+|++++.........+.. .++++.+.......++.++.+++.+|++...+.
T Consensus 59 ~~~l~~g~i~---------d~~~~~~~l~~~~~~~~~~~~~~~~---~~v~tvp~~~~~~~~~~~~~~~~~~g~~~~~i~ 126 (272)
T 3h1q_A 59 ASVVKDGLVV---------DYIGAIQIVRELKAKVERLLGSELF---QAATAIPPGTVGRNAEACGHVVAGAGLELVTLV 126 (272)
T ss_dssp CCCCBTTBCT---------THHHHHHHHHHHHHHHHHHSSSCCC---EEEEECCSCC---CTTHHHHHHHHTTCEEEEEE
T ss_pred ccccCCCEEE---------cHHHHHHHHHHHHHHHHHhcCCccC---eEEEEcCCCCCHHHHHHHHHHHHHcCCeeeecc
Confidence 4689999987 9999999999998643222111221 233443433333334577888999999999999
Q ss_pred ehhhHHhhhcCCceEEEEEeCCCceEEEEeeCCeeccCCcEEecchHHHHHHHHHHHHHhcCCCCCcccccccchhhHHH
Q 007655 272 QEGLAAVFGNGLSTACVVNMGAQVTSVICVEDGVALPNTEKTLPFGGEDISRCLLWTQRHHQTWPQIRTDILTKAMDLLM 351 (594)
Q Consensus 272 ~esvla~ygaG~stg~VVDiG~~~TsV~pV~dG~vl~~s~~~l~~GG~dit~~l~~lL~~~~~~p~~~~~~l~~~~d~~l 351 (594)
.++.|+++++|..+++|||+|+++|.++++.+|.++. ...+++||.++|+.+.+.+. .+...
T Consensus 127 ~e~~A~a~~~~~~~~~viDiGggst~~~~~~~g~~~~--~~~~~~Gg~~~~~~l~~~l~----------------~~~~~ 188 (272)
T 3h1q_A 127 DEPVAAARALGINDGIVVDIGGGTTGIAVIEKGKITA--TFDEPTGGTHLSLVLAGSYK----------------IPFEE 188 (272)
T ss_dssp CHHHHHHHHHTCSSEEEEEECSSCEEEEEEETTEEEE--ECCBSCCHHHHHHHHHHHHT----------------CCHHH
T ss_pred cHHHHHHHHHcCCCEEEEEECCCcEEEEEEECCEEEE--EecCCCcHHHHHHHHHHHhC----------------CCHHH
Confidence 9999999999999999999999999999999999874 35789999999999987763 23467
Q ss_pred HHHHHHhcccccCCccccceeeecccCCCCCCCceeEeeeeccCCCcCCCCcccCCCCCCCCCCCCCCCccccccCCccc
Q 007655 352 LNRIKESYCEIKEGEIDAVAVVHSYEDGMPPGSHKTRLIALNVPPMGLFYPKLLVPDVYPPPPRSWFNDYEDMLEDTWHT 431 (594)
Q Consensus 352 ~e~lKe~~c~v~~~~~~~~~~~~~~~~~~p~~~~k~~~~~~~~aP~~lf~p~~~~~e~~~~p~~~~~~~~ed~~~d~~~~ 431 (594)
++++|+++|.-. .+. + ++
T Consensus 189 ae~~k~~~~~~~-----------~~~-------------~------------~~-------------------------- 206 (272)
T 3h1q_A 189 AETIKKDFSRHR-----------EIM-------------R------------VV-------------------------- 206 (272)
T ss_dssp HHHHHHSSTTHH-----------HHH-------------H------------HH--------------------------
T ss_pred HHHHHHhcCCHH-----------HHH-------------H------------HH--------------------------
Confidence 899998876100 000 0 00
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCCcccCCCHHHHHHHHHhccCChhHHHHHhcCeEEEcCCCCcCChHHH
Q 007655 432 DFPRRSDISDNFYPGINVGLPMWESYPVLTTKPKKEEKIGLAEAVTSSILSTGRIDLQRKLFCSIQLIGGVALTGGLIPA 511 (594)
Q Consensus 432 ~~~~r~~~~E~lfp~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~I~~sI~~~~~~d~r~~L~~nIvL~GG~S~ipGf~eR 511 (594)
. .-...+.+.|.+++.++ + ...+|+|+||+|++|||.++
T Consensus 207 -------------~---------------------~~~~~i~~~i~~~l~~~-~------~~~~ivL~GG~a~~~~l~~~ 245 (272)
T 3h1q_A 207 -------------R---------------------PVIEKMALIVKEVIKNY-D------QTLPVYVVGGTAYLTGFSEE 245 (272)
T ss_dssp -------------H---------------------HHHHHHHHHHHHHTTTS-C------SSCCEEEESGGGGSTTHHHH
T ss_pred -------------H---------------------HHHHHHHHHHHHHHHhc-C------CCCEEEEECCccchhhHHHH
Confidence 0 00124667777777777 4 23599999999999999999
Q ss_pred HHHHHhhhCCCCCCcceEEEcCCCCCCceeEEeceeeec
Q 007655 512 VEERVLHAIPSNEAIDMVEVLQSRTNPTYVSWKGGAVLG 550 (594)
Q Consensus 512 L~~eL~~~~p~~~~~~~V~v~~~~~dp~~~aW~GgSIla 550 (594)
|++++.. +|.+ +.+|.+++|+||+++|
T Consensus 246 l~~~l~~---------~v~~---~~~p~~a~a~Gaal~a 272 (272)
T 3h1q_A 246 FSRFLGK---------EVQV---PIHPLLVTPLGIALFG 272 (272)
T ss_dssp HHHHHSS---------CCBC---CSSGGGHHHHHHHTTC
T ss_pred HHHHhCC---------Cccc---cCChHHHHHHHHHhcC
Confidence 9999842 1222 3588999999998865
No 10
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=99.61 E-value=1.4e-15 Score=167.89 Aligned_cols=224 Identities=17% Similarity=0.175 Sum_probs=139.8
Q ss_pred eeeecCCCCChHHHHHHHHHHHHhcCCCeEEEeehhhHHhhhcCC-----ceEEEEEeCCCceEEEEee--CCee-ccCC
Q 007655 239 AILVLPESFDNREIKEMLSIVLRDLRFASAVVHQEGLAAVFGNGL-----STACVVNMGAQVTSVICVE--DGVA-LPNT 310 (594)
Q Consensus 239 ~VLvip~~~~~~~vr~l~ellfE~~~f~~v~~~~esvla~ygaG~-----stg~VVDiG~~~TsV~pV~--dG~v-l~~s 310 (594)
.|+-+|..|+..+.+.+.+ +++..|++.+.++.++.||++++|. .+.+|||+|+++|.|+.+. +|.. +..+
T Consensus 112 ~VitvPa~~~~~qr~a~~~-a~~~AGl~~~~li~Ep~AAAlay~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~ 190 (509)
T 2v7y_A 112 AVITVPAYFNDAQRQATKD-AGRIAGLEVERIINEPTAAALAYGLDKEEDQTILVYDLGGGTFDVSILELGDGVFEVKAT 190 (509)
T ss_dssp EEEEECTTCCHHHHHHHHH-HHHHTTCEEEEEEEHHHHHHHHTTGGGSCSEEEEEEEECSSCEEEEEEEEETTEEEEEEE
T ss_pred EEEEECCCCCHHHHHHHHH-HHHHcCCCeEEEecCHHHHHHHHhhccCCCCEEEEEECCCCeEEEEEEEEcCCeEEEEEe
Confidence 5666777777665444555 5689999999999999999999987 3789999999999999776 4643 2233
Q ss_pred cEEecchHHHHHHHHHHHHHhcCCCCCcccccccc-----hhhHHHHHHHHHhcccccCCccccceeeecccCCCCCCCc
Q 007655 311 EKTLPFGGEDISRCLLWTQRHHQTWPQIRTDILTK-----AMDLLMLNRIKESYCEIKEGEIDAVAVVHSYEDGMPPGSH 385 (594)
Q Consensus 311 ~~~l~~GG~dit~~l~~lL~~~~~~p~~~~~~l~~-----~~d~~l~e~lKe~~c~v~~~~~~~~~~~~~~~~~~p~~~~ 385 (594)
....++||+++|+.|.+.+...-.- .+ ..++.. ..-+..+|++|+.+|......+.. ...+. .+++..
T Consensus 191 ~g~~~lGG~d~d~~l~~~l~~~~~~-~~-~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~l---~~~~~--~~~G~~ 263 (509)
T 2v7y_A 191 AGDNHLGGDDFDQVIIDYLVNQFKQ-EH-GIDLSKDKMALQRLKDAAEKAKKELSGVTQTQISL---PFISA--NENGPL 263 (509)
T ss_dssp EEETTCSHHHHHHHHHHHHHHHHHH-HH-SCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEE---EEEEE--ETTEEE
T ss_pred cCCCCcCHHHHHHHHHHHHHHHHHH-Hh-CCCcccCHHHHHHHHHHHHHHHHhcCCCCcEEEEE---ecccc--CCCCCe
Confidence 3457899999999998776442000 00 011111 012467899999988653221110 00000 000100
Q ss_pred ee--EeeeeccCCCcCCCCcccCCCCCCCCCCCCCCCccccccCCccccCCCCCCCCCCCCCCCCCCCCCCCCCCccCCC
Q 007655 386 KT--RLIALNVPPMGLFYPKLLVPDVYPPPPRSWFNDYEDMLEDTWHTDFPRRSDISDNFYPGINVGLPMWESYPVLTTK 463 (594)
Q Consensus 386 k~--~~~~~~~aP~~lf~p~~~~~e~~~~p~~~~~~~~ed~~~d~~~~~~~~r~~~~E~lfp~~~~~~~~~~~~~~~~~~ 463 (594)
.. .+.. + .+ |.++..
T Consensus 264 ~~~~~itr----------------~---------------------------~f---e~l~~~----------------- 280 (509)
T 2v7y_A 264 HLEMTLTR----------------A---------------------------KF---EELSAH----------------- 280 (509)
T ss_dssp EEEEEEEH----------------H---------------------------HH---HHHTHH-----------------
T ss_pred eEEEEEEH----------------H---------------------------HH---HHHHHH-----------------
Confidence 00 0000 0 00 001100
Q ss_pred CCcccCCCHHHHHHHHHhccCChhHHHHHhcCeEEEcCCCCcCChHHHHHHHHhhhCCCCCCcceEEEcCCCCCCceeEE
Q 007655 464 PKKEEKIGLAEAVTSSILSTGRIDLQRKLFCSIQLIGGVALTGGLIPAVEERVLHAIPSNEAIDMVEVLQSRTNPTYVSW 543 (594)
Q Consensus 464 ~~~~~~~~L~~~I~~sI~~~~~~d~r~~L~~nIvL~GG~S~ipGf~eRL~~eL~~~~p~~~~~~~V~v~~~~~dp~~~aW 543 (594)
-...+.+.|.+++..+ . +.....++|+|+||+|.+||+.++|++++.. + +. ...+|..++|
T Consensus 281 ----~~~~i~~~i~~~L~~a-~--~~~~~i~~VvLvGG~s~~p~v~~~l~~~f~~--~-------~~---~~~~p~~aVa 341 (509)
T 2v7y_A 281 ----LVERTMGPVRQALQDA-G--LTPADIDKVILVGGSTRIPAVQEAIKRELGK--E-------PH---KGVNPDEVVA 341 (509)
T ss_dssp ----HHHTTHHHHHHHHHHH-T--CCGGGCSEEEEESGGGGCHHHHHHHHHHHSS--C-------CB---CCSCTTTHHH
T ss_pred ----HHHHHHHHHHHHHHHc-C--CChhHCcEEEEECCcccChHHHHHHHHHhCC--C-------cC---cCCCchhhhH
Confidence 0124667777888776 3 2344568999999999999999999998842 1 11 1357889999
Q ss_pred eceeeeccc
Q 007655 544 KGGAVLGIL 552 (594)
Q Consensus 544 ~GgSIla~L 552 (594)
.||+++|..
T Consensus 342 ~Gaa~~a~~ 350 (509)
T 2v7y_A 342 IGAAIQGGV 350 (509)
T ss_dssp HHHHHHHHH
T ss_pred hhHHHHHHH
Confidence 999999863
No 11
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=99.52 E-value=6.4e-15 Score=156.78 Aligned_cols=91 Identities=19% Similarity=0.226 Sum_probs=68.7
Q ss_pred eeeecCCCCChHHHHHHHHHHHHhcCCCeEEEeehhhHHhhhcCCce------EEEEEeCCCceEEEEee--CCeeccCC
Q 007655 239 AILVLPESFDNREIKEMLSIVLRDLRFASAVVHQEGLAAVFGNGLST------ACVVNMGAQVTSVICVE--DGVALPNT 310 (594)
Q Consensus 239 ~VLvip~~~~~~~vr~l~ellfE~~~f~~v~~~~esvla~ygaG~st------g~VVDiG~~~TsV~pV~--dG~vl~~s 310 (594)
.|+-+|..|+..+. +.+.-+++..|++.+.++.|+.||++++|... .+|||+|+++|.|+.+. +|..-..+
T Consensus 156 ~vitvP~~~~~~~r-~~~~~a~~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~vlV~D~Gggt~dvsv~~~~~~~~~~~~ 234 (394)
T 3qfu_A 156 AVVTVPAYFNDAQR-QATKDAGTIAGLNVLRIVNEPTAAAIAYGLDKSDKEHQIIVYDLGGGTFDVSLLSIENGVFEVQA 234 (394)
T ss_dssp EEEEECTTCCHHHH-HHHHHHHHHTTCEEEEEEEHHHHHHHHTTTTSCSSCEEEEEEEECSSCEEEEEEEEETTEEEEEE
T ss_pred EEEEECCCCCHHHH-HHHHHHHHHcCCceEEEecCHHHHHHHHhhccCCCCceEEEEEcCCCceeEEEEEEeCCEEEEEE
Confidence 46667777777654 44444558999999999999999999987643 49999999999887764 55432222
Q ss_pred -cEEecchHHHHHHHHHHHHH
Q 007655 311 -EKTLPFGGEDISRCLLWTQR 330 (594)
Q Consensus 311 -~~~l~~GG~dit~~l~~lL~ 330 (594)
....++||+++|+.|.+.+.
T Consensus 235 ~~~~~~lGG~~~d~~l~~~l~ 255 (394)
T 3qfu_A 235 TSGDTHLGGEDFDYKIVRQLI 255 (394)
T ss_dssp EEEETTCSHHHHHHHHHHHHH
T ss_pred EcCCCCCChHHHHHHHHHHHH
Confidence 33479999999999987763
No 12
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=99.47 E-value=2.1e-14 Score=152.48 Aligned_cols=224 Identities=16% Similarity=0.124 Sum_probs=139.8
Q ss_pred eeeecCCCCChHHHHHHHHHHHHhcCCCeEEEeehhhHHhhhcCCc------eEEEEEeCCCceEEEEeeCC------ee
Q 007655 239 AILVLPESFDNREIKEMLSIVLRDLRFASAVVHQEGLAAVFGNGLS------TACVVNMGAQVTSVICVEDG------VA 306 (594)
Q Consensus 239 ~VLvip~~~~~~~vr~l~ellfE~~~f~~v~~~~esvla~ygaG~s------tg~VVDiG~~~TsV~pV~dG------~v 306 (594)
.|+.+|..|+..+.+.+.+ +++..|++.+.++.+++||++++|.. +.+|||+|+++|.++.+..| ..
T Consensus 138 ~vitvP~~~~~~~r~~~~~-a~~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~lVvD~Gggttdvsv~~~~~~~~~~~~ 216 (383)
T 1dkg_D 138 AVITVPAYFNDAQRQATKD-AGRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTF 216 (383)
T ss_dssp EEECBCTTCCHHHHHHHHH-HHHHTTCEESCCCBHHHHHHHHHTCCC-CCEEEEEEEEECSSCEEEEEEEEEC----CCC
T ss_pred EEEEECCCCCHHHHHHHHH-HHHHcCCceEEEeccHHHHHHHHHhccCCCCcEEEEEEcCCCeEEEEEEEEEecCCCCeE
Confidence 4666677677665444555 57899999999999999999888763 68999999999999987644 32
Q ss_pred cc-CCcEEecchHHHHHHHHHHHHHhcCCCCCcccccccc-----hhhHHHHHHHHHhcccccCCccccceeeecccCCC
Q 007655 307 LP-NTEKTLPFGGEDISRCLLWTQRHHQTWPQIRTDILTK-----AMDLLMLNRIKESYCEIKEGEIDAVAVVHSYEDGM 380 (594)
Q Consensus 307 l~-~s~~~l~~GG~dit~~l~~lL~~~~~~p~~~~~~l~~-----~~d~~l~e~lKe~~c~v~~~~~~~~~~~~~~~~~~ 380 (594)
.. .+....++||+++|+.|.+++...-. .-...++.. ..-+..+|++|+.+|......+.. ...+. .
T Consensus 217 ~v~~~~~~~~lGG~~id~~l~~~l~~~~~--~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i---~~~~~--~ 289 (383)
T 1dkg_D 217 EVLATNGDTHLGGEDFDSRLINYLVEEFK--KDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNL---PYITA--D 289 (383)
T ss_dssp EEEEEEEESSCSHHHHHHHHHHHHHHHHH--HHHCCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEE---EEEEE--E
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHHHHHH--HHhCCCcccCHHHHHHHHHHHHHHHHHhCCCCceEEEE---ecccc--c
Confidence 11 12345789999999999887654200 000001111 012467899999998654211110 00000 1
Q ss_pred CCCCce--eEeeeeccCCCcCCCCcccCCCCCCCCCCCCCCCccccccCCccccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 007655 381 PPGSHK--TRLIALNVPPMGLFYPKLLVPDVYPPPPRSWFNDYEDMLEDTWHTDFPRRSDISDNFYPGINVGLPMWESYP 458 (594)
Q Consensus 381 p~~~~k--~~~~~~~~aP~~lf~p~~~~~e~~~~p~~~~~~~~ed~~~d~~~~~~~~r~~~~E~lfp~~~~~~~~~~~~~ 458 (594)
+++... ..+.. + .+ |.+|..
T Consensus 290 ~~G~~~~~~~it~----------------~---------------------------~~---~~~~~~------------ 311 (383)
T 1dkg_D 290 ATGPKHMNIKVTR----------------A---------------------------KL---ESLVED------------ 311 (383)
T ss_dssp TTEEEEEEEEEEH----------------H---------------------------HH---HHHSHH------------
T ss_pred CCCCeeEEEEEeH----------------H---------------------------HH---HHHHHH------------
Confidence 111000 00000 0 00 001100
Q ss_pred ccCCCCCcccCCCHHHHHHHHHhccCChhHHHHHhcCeEEEcCCCCcCChHHHHHHHHhhhCCCCCCcceEEEcCCCCCC
Q 007655 459 VLTTKPKKEEKIGLAEAVTSSILSTGRIDLQRKLFCSIQLIGGVALTGGLIPAVEERVLHAIPSNEAIDMVEVLQSRTNP 538 (594)
Q Consensus 459 ~~~~~~~~~~~~~L~~~I~~sI~~~~~~d~r~~L~~nIvL~GG~S~ipGf~eRL~~eL~~~~p~~~~~~~V~v~~~~~dp 538 (594)
....+.++|.+++.++ + +.....++|+|+||+|++||+.++|++++.. ++. ...+|
T Consensus 312 ---------~~~~i~~~i~~~l~~~-~--~~~~~i~~IvL~GG~s~~p~l~~~l~~~~~~---------~v~---~~~~p 367 (383)
T 1dkg_D 312 ---------LVNRSIELLKVALQDA-G--LSVSDIDDVILVGGQTRMPMVQKKVAEFFGK---------EPR---KDVNP 367 (383)
T ss_dssp ---------HHHHHHHHHHHHHHTT-T--CCTTTCCEEEEESGGGGSHHHHHHHHHHHSS---------CCB---CSSCT
T ss_pred ---------HHHHHHHHHHHHHHHc-C--CCHhhCCEEEEecCccccHHHHHHHHHHhCC---------CCC---CCcCh
Confidence 1125678888888887 3 2334568999999999999999999999852 111 13578
Q ss_pred ceeEEeceeeeccc
Q 007655 539 TYVSWKGGAVLGIL 552 (594)
Q Consensus 539 ~~~aW~GgSIla~L 552 (594)
..++|+||+++|.+
T Consensus 368 ~~ava~Gaa~~a~~ 381 (383)
T 1dkg_D 368 DEAVAIGAAVQGGV 381 (383)
T ss_dssp TTHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHh
Confidence 89999999999875
No 13
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=99.45 E-value=3e-14 Score=152.39 Aligned_cols=91 Identities=19% Similarity=0.281 Sum_probs=69.9
Q ss_pred eeeecCCCCChHHHHHHHHHHHHhcCCCeEEEeehhhHHhhhcCCce---------EEEEEeCCCceEEEEee--CCee-
Q 007655 239 AILVLPESFDNREIKEMLSIVLRDLRFASAVVHQEGLAAVFGNGLST---------ACVVNMGAQVTSVICVE--DGVA- 306 (594)
Q Consensus 239 ~VLvip~~~~~~~vr~l~ellfE~~~f~~v~~~~esvla~ygaG~st---------g~VVDiG~~~TsV~pV~--dG~v- 306 (594)
.|+-+|..|+..+. +.+.-+++..|++.+.++.|+.||++++|... .+|||+|+++|.++.+. +|..
T Consensus 161 ~vitvPa~~~~~~r-~~~~~a~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~~vlV~D~GgGT~dvsv~~~~~~~~~ 239 (404)
T 3i33_A 161 AVITVPAYFNDSQR-QATKDAGTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFE 239 (404)
T ss_dssp EEEEECTTCCHHHH-HHHHHHHHHHTCEEEEEEEHHHHHHHHTTTTSSCSSSSCCEEEEEEECSSCEEEEEEEEETTEEE
T ss_pred EEEEECCCCCHHHH-HHHHHHHHHcCCCeEEEeccHHHHHHHHHhhcccccCCCceEEEEECCCCcEEEEEEEEeCCeEE
Confidence 47777777877664 44455588999999999999999999887543 49999999999998774 5443
Q ss_pred ccCCcEEecchHHHHHHHHHHHHH
Q 007655 307 LPNTEKTLPFGGEDISRCLLWTQR 330 (594)
Q Consensus 307 l~~s~~~l~~GG~dit~~l~~lL~ 330 (594)
+..+....++||+++|+.|.+.+.
T Consensus 240 v~~~~~~~~lGG~~~d~~l~~~l~ 263 (404)
T 3i33_A 240 VKSTAGDTHLGGEDFDNRMVSHLA 263 (404)
T ss_dssp EEEEEEETTCSHHHHHHHHHHHHH
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHH
Confidence 222334578999999999987663
No 14
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=99.05 E-value=7.2e-10 Score=123.37 Aligned_cols=91 Identities=18% Similarity=0.265 Sum_probs=71.7
Q ss_pred eeeecCCCCChHHHHHHHHHHHHhcCCCeEEEeehhhHHhhhcCC-------ceEEEEEeCCCceEEEEee--CCee-cc
Q 007655 239 AILVLPESFDNREIKEMLSIVLRDLRFASAVVHQEGLAAVFGNGL-------STACVVNMGAQVTSVICVE--DGVA-LP 308 (594)
Q Consensus 239 ~VLvip~~~~~~~vr~l~ellfE~~~f~~v~~~~esvla~ygaG~-------stg~VVDiG~~~TsV~pV~--dG~v-l~ 308 (594)
+|+-+|..|+..+ |+.+.-+++..|++.+.++.++.||++++|. .+.+|+|+|+++|.|+.+. +|.. +.
T Consensus 142 ~VitVPa~f~~~q-r~a~~~A~~~AGl~~~~li~EP~AAAlay~~~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~ 220 (554)
T 1yuw_A 142 AVVTVPAYFNDSQ-RQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIAAGIFEVK 220 (554)
T ss_dssp EEEEECTTCCHHH-HHHHHHHHHTTTCEEEEEEEHHHHHHHHTTCSTTCSSCEEEEEEEECSSCEEEEEEEEETTEEEEE
T ss_pred EEEEECCCCCHHH-HHHHHHHHHHcCCCeEEEeCcHHHHHHHHHhhccCCCCcEEEEEEcCCCeEEEEEEEEcCCcEEEE
Confidence 5777777888766 4444447789999999999999999988874 4589999999999999886 7754 22
Q ss_pred CCcEEecchHHHHHHHHHHHHH
Q 007655 309 NTEKTLPFGGEDISRCLLWTQR 330 (594)
Q Consensus 309 ~s~~~l~~GG~dit~~l~~lL~ 330 (594)
.+.....+||+++++.|.+.+.
T Consensus 221 a~~g~~~lGG~d~d~~l~~~l~ 242 (554)
T 1yuw_A 221 STAGDTHLGGEDFDNRMVNHFI 242 (554)
T ss_dssp EEEEETTCSHHHHHHHHHHHHH
T ss_pred EEeCCCCCCHHHHHHHHHHHHH
Confidence 3344578999999999887654
No 15
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=99.01 E-value=2.3e-09 Score=113.18 Aligned_cols=90 Identities=20% Similarity=0.347 Sum_probs=70.9
Q ss_pred HHHHHHhcCCCeEEEeehhhHHhhhcCC-------ceEEEEEeCCCceEEEEeeCCeeccCCcEEecchHHHHHHHHHHH
Q 007655 256 LSIVLRDLRFASAVVHQEGLAAVFGNGL-------STACVVNMGAQVTSVICVEDGVALPNTEKTLPFGGEDISRCLLWT 328 (594)
Q Consensus 256 ~ellfE~~~f~~v~~~~esvla~ygaG~-------stg~VVDiG~~~TsV~pV~dG~vl~~s~~~l~~GG~dit~~l~~l 328 (594)
+.-+++..|+.-..+..+++|+++++|. ...+|||+|+++|.|+.+.+|.++. ...+++||+++|+.+.+.
T Consensus 156 ~~~~~~~aGl~~~~i~~ep~Aaa~~~~~~~~~~~~~~~~vvDiGggttdi~i~~~g~~~~--~~~~~~GG~~i~~~i~~~ 233 (377)
T 2ych_A 156 VLEALRGAGLVPVVLDVKPFAGLYPLEARLAEEPDRVFLVLDIGAESTSLVLLRGDKPLA--VRVLTLSGKDFTEAIARS 233 (377)
T ss_dssp HHHHHHHTTCEEEEEEEHHHHTTGGGHHHHHTSTTCEEEEEEECSSCEEEEEEETTEEEE--EEEESCSHHHHHHHHHHH
T ss_pred HHHHHHHCCCceEEEecchHHHHHHHHhhcccccCCeEEEEEECCCcEEEEEEECCEEEE--EEeeechHHHHHHHHHHH
Confidence 3445688999999999999999887652 2369999999999999999998874 357899999999998763
Q ss_pred HHhcCCCCCcccccccchhhHHHHHHHHHhccccc
Q 007655 329 QRHHQTWPQIRTDILTKAMDLLMLNRIKESYCEIK 363 (594)
Q Consensus 329 L~~~~~~p~~~~~~l~~~~d~~l~e~lKe~~c~v~ 363 (594)
+ + .+...+|++|+++++..
T Consensus 234 ~---~-------------~~~~~aE~~K~~~~~~~ 252 (377)
T 2ych_A 234 F---N-------------LDLLAAEEVKRTYGMAT 252 (377)
T ss_dssp T---T-------------CCHHHHHHHHHHTC---
T ss_pred h---C-------------CCHHHHHHHHhhccccc
Confidence 2 1 23567999999988654
No 16
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=98.98 E-value=6.1e-10 Score=125.23 Aligned_cols=139 Identities=18% Similarity=0.157 Sum_probs=90.1
Q ss_pred HHHHHHHHHhhhcCCCCCCCcccceeeecCCCCChHHHHHHHHHHHHhcCCCeEEEeehhhHHhhhcCCc------eEEE
Q 007655 215 LYAIWDWILTEKLHIPRSERNLYSAILVLPESFDNREIKEMLSIVLRDLRFASAVVHQEGLAAVFGNGLS------TACV 288 (594)
Q Consensus 215 le~iw~~~l~~~L~i~~~d~~~y~~VLvip~~~~~~~vr~l~ellfE~~~f~~v~~~~esvla~ygaG~s------tg~V 288 (594)
|..+++.+- ..|+.+..+ +|+-+|..|+..+ |+.+.-+.+..|+..+.++.++.||++++|.. ..+|
T Consensus 120 L~~l~~~ae-~~l~~~v~~-----~VitVPa~f~d~q-r~a~~~A~~~AGl~v~~li~EP~AAAlay~l~~~~~~~~vlV 192 (605)
T 2kho_A 120 LKKMKKTAE-DYLGEPVTE-----AVITVPAYFNDAQ-RQATKDAGRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAV 192 (605)
T ss_dssp HHHHHHHHH-HHHCSCCCE-----EEEEECTTCCHHH-HHHHHHHHHTTTCEEEEEEEHHHHHHHHTTTTSSSSEEEEEE
T ss_pred HHHHHHHHH-HHhCCCCcE-----EEEEECCCCCHHH-HHHHHHHHHHcCCceEEEecCHHHHHHHhhhcccCCCCEEEE
Confidence 355555542 456543322 5777888787665 44445557889999999999999999888753 3799
Q ss_pred EEeCCCceEEEEee------CCee-ccCCcEEecchHHHHHHHHHHHHHhcCCCCCcccccccc-h----hhHHHHHHHH
Q 007655 289 VNMGAQVTSVICVE------DGVA-LPNTEKTLPFGGEDISRCLLWTQRHHQTWPQIRTDILTK-A----MDLLMLNRIK 356 (594)
Q Consensus 289 VDiG~~~TsV~pV~------dG~v-l~~s~~~l~~GG~dit~~l~~lL~~~~~~p~~~~~~l~~-~----~d~~l~e~lK 356 (594)
+|+|+++|.|+.+. +|.. +..+.....+||+++++.|.+.+...-.- .+ ..++.. . .-+..+|++|
T Consensus 193 ~DlGGGT~Dvsi~~~~~~~~~g~~~v~a~~gd~~lGG~d~D~~l~~~l~~~~~~-~~-~~~~~~~~~~~~~L~~~aE~~K 270 (605)
T 2kho_A 193 YDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKK-DQ-GIDLRNDPLAMQRLKEAAEKAK 270 (605)
T ss_dssp EEECSSCEEEEEEEEECTTTSCEEEEEEEEEESSCSGGGTHHHHHHHHHHHHHH-HH-SCCSTTCHHHHHHHHHHHHHHH
T ss_pred EECCCCeEEEEEEEEEecCCCCeEEEEEECCCCCccHHHHHHHHHHHHHHHHHH-Hh-CCCcccCHHHHHHHHHHHHHHH
Confidence 99999999999886 4543 12223446899999999998766432000 00 001110 0 1135688899
Q ss_pred Hhcccc
Q 007655 357 ESYCEI 362 (594)
Q Consensus 357 e~~c~v 362 (594)
+.++..
T Consensus 271 ~~ls~~ 276 (605)
T 2kho_A 271 IELSSA 276 (605)
T ss_dssp HHTTSS
T ss_pred HHcCCC
Confidence 888754
No 17
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=98.95 E-value=1.8e-09 Score=122.76 Aligned_cols=91 Identities=14% Similarity=0.193 Sum_probs=70.5
Q ss_pred eeeecCCCCChHHHHHHHHHHHHhcCCCeEEEeehhhHHhhhcCC------------ceEEEEEeCCCceEEEEee--CC
Q 007655 239 AILVLPESFDNREIKEMLSIVLRDLRFASAVVHQEGLAAVFGNGL------------STACVVNMGAQVTSVICVE--DG 304 (594)
Q Consensus 239 ~VLvip~~~~~~~vr~l~ellfE~~~f~~v~~~~esvla~ygaG~------------stg~VVDiG~~~TsV~pV~--dG 304 (594)
+|+-+|..|+..+ |+.+.-+.+..|+..+.++.++.||++++|. .+.+|+|+|+++|.|+.+. +|
T Consensus 141 ~VITVPa~f~~~q-R~a~~~Aa~~AGl~~~~li~EP~AAAlaygl~~~~~~~~~~~~~~vlV~DlGGGT~Dvsv~~~~~g 219 (675)
T 3d2f_A 141 VCIAVPPWYTEEQ-RYNIADAARIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKKG 219 (675)
T ss_dssp EEEEECTTCCHHH-HHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHCSCCCCSSSCCEEEEEEEECSSCEEEEEEEEETT
T ss_pred EEEEECCCCCHHH-HHHHHHHHHHcCCceEEEEcchHHHHHHHhhhccccccccCCCcEEEEEEcCCCcEEEEEEEecCC
Confidence 5777787888765 4444446688999999999999999877653 3589999999999998885 67
Q ss_pred ee-ccCCcEEecchHHHHHHHHHHHHH
Q 007655 305 VA-LPNTEKTLPFGGEDISRCLLWTQR 330 (594)
Q Consensus 305 ~v-l~~s~~~l~~GG~dit~~l~~lL~ 330 (594)
.. +..+.....+||+++++.|.+.+.
T Consensus 220 ~~~V~a~~gd~~lGG~d~D~~l~~~l~ 246 (675)
T 3d2f_A 220 QLKVLGTACDKHFGGRDFDLAITEHFA 246 (675)
T ss_dssp EEEEEEEEEETTCSHHHHHHHHHHHHH
T ss_pred eEEEEEEcCCCCccHHHHHHHHHHHHH
Confidence 54 333334578999999999987664
No 18
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=98.87 E-value=5.2e-09 Score=111.85 Aligned_cols=111 Identities=17% Similarity=0.206 Sum_probs=79.4
Q ss_pred HHHHHHHHHHhhhcCCCCCCCcccceeeecCCCCChHHHHHHHHHHHHhcCCCeEEEeehhhHHhhhcCCc--------e
Q 007655 214 DLYAIWDWILTEKLHIPRSERNLYSAILVLPESFDNREIKEMLSIVLRDLRFASAVVHQEGLAAVFGNGLS--------T 285 (594)
Q Consensus 214 dle~iw~~~l~~~L~i~~~d~~~y~~VLvip~~~~~~~vr~l~ellfE~~~f~~v~~~~esvla~ygaG~s--------t 285 (594)
.|+.+++++- ..++.+..+ .|+.+|..|+..+ |+.+.-+.+..|+..+.++.|+.||+++++.. +
T Consensus 134 ~L~~l~~~a~-~~~~~~~~~-----~vitvPa~~~~~~-r~~~~~a~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~ 206 (409)
T 4gni_A 134 YLRRLVGAAS-EYLGKKVTS-----AVITIPTNFTEKQ-KAALIAAAAAADLEVLQLISEPAAAVLAYDARPEATISDKI 206 (409)
T ss_dssp HHHHHHHHHH-HHHTSCCCE-----EEEEECTTCCHHH-HHHHHHHHHHTTCEEEEEEEHHHHHHHHTTC------CCEE
T ss_pred HHHHHHHHHH-HHhCCCCCe-----EEEEECCCCCHHH-HHHHHHHHHHcCCCeEEEEcCHHHHHHHHhcccccCCCCCE
Confidence 3566666653 455543322 5777888888765 34555567888999999999999999998864 4
Q ss_pred EEEEEeCCCceEEEEe--eCCeec-cCCcEEecchHHHHHHHHHHHHHh
Q 007655 286 ACVVNMGAQVTSVICV--EDGVAL-PNTEKTLPFGGEDISRCLLWTQRH 331 (594)
Q Consensus 286 g~VVDiG~~~TsV~pV--~dG~vl-~~s~~~l~~GG~dit~~l~~lL~~ 331 (594)
.+|||+|+++|.++-+ .+|..- ..+....++||+++|+.|.+.+..
T Consensus 207 vlv~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~i~~~l~~ 255 (409)
T 4gni_A 207 IVVADLGGSRSDVTVLASRSGMYTILATVHDYEYHGIALDKVLIDHFSK 255 (409)
T ss_dssp EEEEEECSSCEEEEEEEEETTEEEEEEEEEESSSSHHHHHHHHHHHHHH
T ss_pred EEEEECCCCceEEEEEEEeCCeEEEEEecCCCCcCHHHHHHHHHHHHHH
Confidence 8999999999999875 344321 111234799999999999877653
No 19
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=98.75 E-value=3.6e-08 Score=105.80 Aligned_cols=90 Identities=18% Similarity=0.180 Sum_probs=73.6
Q ss_pred HHHHHHHHhcCCCeEEEeehhhHHhhhcCCc-----eEEEEEeCCCceEEEEeeCCeeccCCcEEecchHHHHHHHHHHH
Q 007655 254 EMLSIVLRDLRFASAVVHQEGLAAVFGNGLS-----TACVVNMGAQVTSVICVEDGVALPNTEKTLPFGGEDISRCLLWT 328 (594)
Q Consensus 254 ~l~ellfE~~~f~~v~~~~esvla~ygaG~s-----tg~VVDiG~~~TsV~pV~dG~vl~~s~~~l~~GG~dit~~l~~l 328 (594)
+-..-+++..|+.-..++.+++||+++++.. ..+|||+|+++|.|+-+.+|.+.. ...+++||+++|+.+...
T Consensus 171 ~n~~~~~~~AGL~v~~lv~ep~Aaa~a~l~~~~~~~gv~vvDiGggttdisi~~~g~~~~--~~~i~~GG~~it~dIa~~ 248 (419)
T 4a2a_A 171 EMFYNFLQDTVKSPFQLKSSLVSTAEGVLTTPEKDRGVVVVNLGYNFTGLIAYKNGVPIK--ISYVPVGMKHVIKDVSAV 248 (419)
T ss_dssp HHHHHHHHTTSCSCEEEEEHHHHHHHHHCCHHHHHHCEEEEEECSSSEEEEEEETTEEEE--EEEESCCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCcEEEEEEHHHHHHHHhhccccccCCEEEEEECCCcEEEEEEECCEEEE--EEecccHHHHHHHHHHHH
Confidence 3334457889999999999999999988652 589999999999999999998874 356899999999999865
Q ss_pred HHhcCCCCCcccccccchhhHHHHHHHHHhccc
Q 007655 329 QRHHQTWPQIRTDILTKAMDLLMLNRIKESYCE 361 (594)
Q Consensus 329 L~~~~~~p~~~~~~l~~~~d~~l~e~lKe~~c~ 361 (594)
+. .+...+|++|.++..
T Consensus 249 l~----------------~~~~~AE~iK~~~g~ 265 (419)
T 4a2a_A 249 LD----------------TSFEESERLIITHGN 265 (419)
T ss_dssp HT----------------CCHHHHHHHHHHHCC
T ss_pred HC----------------CCHHHHHHHHHHhcc
Confidence 42 235679999998764
No 20
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=98.65 E-value=8.3e-08 Score=107.84 Aligned_cols=109 Identities=21% Similarity=0.235 Sum_probs=77.6
Q ss_pred HHHHHHHHHhhhcCCCCCCCcccceeeecCCCCChHHHHHHHHHHHHhcCCCeEEEeehhhHHhhhcCC------ceEEE
Q 007655 215 LYAIWDWILTEKLHIPRSERNLYSAILVLPESFDNREIKEMLSIVLRDLRFASAVVHQEGLAAVFGNGL------STACV 288 (594)
Q Consensus 215 le~iw~~~l~~~L~i~~~d~~~y~~VLvip~~~~~~~vr~l~ellfE~~~f~~v~~~~esvla~ygaG~------stg~V 288 (594)
|..+.+.+- ..|+.+..+ +|+-+|..|+..+ |+.+.-+.+..|+..+.++.++.||++++|. .+-+|
T Consensus 120 L~~lk~~ae-~~lg~~v~~-----~VITVPa~f~~~q-r~a~~~Aa~~AGl~v~~li~EP~AAAlaygl~~~~~~~~vlV 192 (605)
T 4b9q_A 120 LKKMKKTAE-DYLGEPVTE-----AVITVPAYFNDAQ-RQATKDAGRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAV 192 (605)
T ss_dssp HHHHHHHHH-HHHTSCCCE-----EEEEECTTCCHHH-HHHHHHHHHHTTCEEEEEEEHHHHHHHHHHTTSCCSSEEEEE
T ss_pred HHHHHHHHH-HHhCCCCCe-----EEEEECCCCCHHH-HHHHHHHHHHcCCceEEEeCcHHHHHHHhhhhccCCCCEEEE
Confidence 345555543 556654332 5777787887665 4566666788999999999999999988764 35699
Q ss_pred EEeCCCceEEEEeeCCe------e-ccCCcEEecchHHHHHHHHHHHHH
Q 007655 289 VNMGAQVTSVICVEDGV------A-LPNTEKTLPFGGEDISRCLLWTQR 330 (594)
Q Consensus 289 VDiG~~~TsV~pV~dG~------v-l~~s~~~l~~GG~dit~~l~~lL~ 330 (594)
+|+|++++.|+.+.-+- . +..+.....+||+++++.|.+.+.
T Consensus 193 ~DlGGGT~Dvsi~~~~~~~~~~~~evla~~gd~~lGG~d~D~~l~~~l~ 241 (605)
T 4b9q_A 193 YDLGGGAFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLV 241 (605)
T ss_dssp EEECSSCEEEEEEEEEESSSCEEEEEEEEEEETTCSHHHHHHHHHHHHH
T ss_pred EECCCCeEEEEEEEEecCCCCceEEEEEecCCCCcChHHHHHHHHHHHH
Confidence 99999999999875332 1 111223467899999999987664
No 21
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=98.40 E-value=4.8e-07 Score=94.62 Aligned_cols=137 Identities=15% Similarity=0.169 Sum_probs=93.1
Q ss_pred CceEEccccccCCCCCCceEEcceecCeeeecCCCChhhcHHHHHHHHHHHHhhhcC-CCCCCCccccee--eecCCCCC
Q 007655 172 REFICGEEALRVSPTEPYCIHRPIRRGHLNISQHYPMQQVLEDLYAIWDWILTEKLH-IPRSERNLYSAI--LVLPESFD 248 (594)
Q Consensus 172 ~~~~vGdeAl~~~~~~~~~l~~Pi~~G~~n~~~~~s~~~~~~dle~iw~~~l~~~L~-i~~~d~~~y~~V--Lvip~~~~ 248 (594)
+.|+||++|. +|++.|.+. + +..+.++.+++.+... -.... .+.| +-+|..+.
T Consensus 78 ~~~~vG~~A~-----------~~l~~~~~~---------~-~~~~~ll~~~l~~~~~~~~~~~---~~vvL~i~vP~~~~ 133 (346)
T 2fsj_A 78 GKYASGNNIR-----------VPQGDGRLA---------S-KEAFPLIAAALWESGIHNDGSP---VDLVIGSGTPLGTF 133 (346)
T ss_dssp GGGCCSSCCB-----------CCSSTTCTT---------S-TTTHHHHHHHHHHHCCCC---C---EEEEEEEEECGGGH
T ss_pred cEEEEcccee-----------cccCCCccc---------C-hhHHHHHHHHHHHhhhccCCCc---eEEEEcccCCHHHH
Confidence 5688999988 577888876 5 5667777777754331 11111 1234 43444344
Q ss_pred hHHHHHHHHHHHHh-------------cCCCeEEEeehhhHHhhhc--CC------ceEEEEEeCCCceEEEEee--CCe
Q 007655 249 NREIKEMLSIVLRD-------------LRFASAVVHQEGLAAVFGN--GL------STACVVNMGAQVTSVICVE--DGV 305 (594)
Q Consensus 249 ~~~vr~l~ellfE~-------------~~f~~v~~~~esvla~yga--G~------stg~VVDiG~~~TsV~pV~--dG~ 305 (594)
..+.+.+.+.+... +++..+.+++|+.+|++++ +. .+.+|||||+++|.|+-+. +|.
T Consensus 134 ~~er~a~~~~~~~~~~~v~~~~G~~~~i~v~~v~li~Ep~AAa~~~l~~~~~~~~~~~vlVvDIGgGTtDv~vi~~~~g~ 213 (346)
T 2fsj_A 134 DLEVKAAKEALENKVLTVTGPEGEVRQFNITRLIMRPQGVGAALYLLNQGIIEQQPGYGVVIDVGSRTTDVLTINLMDME 213 (346)
T ss_dssp HHHHHHHHHHHTTEEEEEECGGGCEEEEEEEEEEEEETTHHHHHHHHHHTSSCCCSSEEEEEEECSSCEEEEEEETTTTE
T ss_pred HHHHHHHHHHHcCCCcEEEeCCCceEEEEEEEEEEEccHHHHHHHhhccccccccCCcEEEEECCCCcEEEEEEEecCCE
Confidence 43433455554332 2357799999999999985 31 3459999999999999998 887
Q ss_pred eccCCcEEecchHHHHHHHHHHHHHhc
Q 007655 306 ALPNTEKTLPFGGEDISRCLLWTQRHH 332 (594)
Q Consensus 306 vl~~s~~~l~~GG~dit~~l~~lL~~~ 332 (594)
.+..+...+++||+++++.+.+.++..
T Consensus 214 ~v~~~s~~~~lGg~~i~~~I~~~i~~~ 240 (346)
T 2fsj_A 214 PVVELSFSLQIGVGDAISALSRKIAKE 240 (346)
T ss_dssp ECGGGCEEESCCHHHHHHHHHHHHHHH
T ss_pred EEeecCCCcchhHHHHHHHHHHHHHHH
Confidence 655556788999999999998877543
No 22
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=97.74 E-value=0.00021 Score=77.40 Aligned_cols=72 Identities=22% Similarity=0.223 Sum_probs=57.1
Q ss_pred ehhhHHhhhc----CCc-eEEEEEeCCCceEEEEeeCCeeccCCcEEecchHHHHHHHHHHHHHhcCCCCCcccccccch
Q 007655 272 QEGLAAVFGN----GLS-TACVVNMGAQVTSVICVEDGVALPNTEKTLPFGGEDISRCLLWTQRHHQTWPQIRTDILTKA 346 (594)
Q Consensus 272 ~esvla~yga----G~s-tg~VVDiG~~~TsV~pV~dG~vl~~s~~~l~~GG~dit~~l~~lL~~~~~~p~~~~~~l~~~ 346 (594)
-++++|.+|+ ++. -.|+||+|+++|+++-+.+|..+. ...+++||+++|..+..-|..
T Consensus 392 ~ep~AA~laaLTedE~elGvaiIDmGgGTTd~sVf~~g~lv~--a~~ip~gG~~VT~DIA~~Lg~--------------- 454 (607)
T 1nbw_A 392 VEANMAIAGALTTPGCAAPLAILDLGAGSTDAAIVNAEGQIT--AVHLAGAGNMVSLLIKTELGL--------------- 454 (607)
T ss_dssp CHHHHHHHHHTTSTTCCSSEEEEEECSSEEEEEEECSSSCEE--EEEEECCHHHHHHHHHHHHTC---------------
T ss_pred ccHHHhhhhhcCCCCCcCCeEEEEeCCCcceEEEEcCCcEEE--EEEeccchHHHHHHHHHHhCC---------------
Confidence 6777777776 333 479999999999999999988774 457999999999999876631
Q ss_pred hhHHHHHHHHHhccc
Q 007655 347 MDLLMLNRIKESYCE 361 (594)
Q Consensus 347 ~d~~l~e~lKe~~c~ 361 (594)
-|...+|+||. +..
T Consensus 455 ~d~~~AErIK~-YG~ 468 (607)
T 1nbw_A 455 EDLSLAEAIKK-YPL 468 (607)
T ss_dssp SCHHHHHHHHH-SCE
T ss_pred CCHHHHHHhcc-cCc
Confidence 24688999998 643
No 23
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=97.70 E-value=0.00017 Score=77.94 Aligned_cols=93 Identities=16% Similarity=0.219 Sum_probs=66.0
Q ss_pred HHHHHHHHHHHhcCCCeEEEeehhhHHhhhc----CCc-eEEEEEeCCCceEEEEeeCCeeccCCcEEecchHHHHHHHH
Q 007655 251 EIKEMLSIVLRDLRFASAVVHQEGLAAVFGN----GLS-TACVVNMGAQVTSVICVEDGVALPNTEKTLPFGGEDISRCL 325 (594)
Q Consensus 251 ~vr~l~ellfE~~~f~~v~~~~esvla~yga----G~s-tg~VVDiG~~~TsV~pV~dG~vl~~s~~~l~~GG~dit~~l 325 (594)
.++.+.+.+=+.++++-=.=.-++++|.+|+ ++. -.|+||+|+++|+++-+.+|..+. ...+++||+++|..+
T Consensus 369 ~m~NI~~cVer~~gL~veV~g~ep~AAglaaLTeDE~eLGvaiIDmGGGTTd~sVf~~G~lv~--a~~ip~gG~~VT~DI 446 (610)
T 2d0o_A 369 QMAMIAREIEQKLNIDVQIGGAEAEAAILGALTTPGTTRPLAILDLGAGSTDASIINPKGDII--ATHLAGAGDMVTMII 446 (610)
T ss_dssp CHHHHHHHHHHHHCCEEEEEEEHHHHHHHHHTTSTTCCSSEEEEEECSSEEEEEEECTTCCEE--EEEEECSHHHHHHHH
T ss_pred HHHHHHHHHHhccCCcceeccccHHHhhhhhcCCCCCcCCeEEEEeCCCcceEEEEcCCcEEE--EEEeccchHHHHHHH
Confidence 3445555554554652111116777777776 333 479999999999999999998774 457999999999999
Q ss_pred HHHHHhcCCCCCcccccccchhhHHHHHHHHHhccc
Q 007655 326 LWTQRHHQTWPQIRTDILTKAMDLLMLNRIKESYCE 361 (594)
Q Consensus 326 ~~lL~~~~~~p~~~~~~l~~~~d~~l~e~lKe~~c~ 361 (594)
..-|.. -|...+|+||. +..
T Consensus 447 A~~Lgt---------------~d~~~AErIK~-YG~ 466 (610)
T 2d0o_A 447 ARELGL---------------EDRYLAEEIKK-YPL 466 (610)
T ss_dssp HHHHTC---------------CCHHHHHHHHH-SCE
T ss_pred HHHhCC---------------CCHHHHHHhcc-cCc
Confidence 876631 24678999998 653
No 24
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=97.18 E-value=0.00056 Score=71.52 Aligned_cols=68 Identities=7% Similarity=0.102 Sum_probs=59.0
Q ss_pred CCeEEEeehhhHHhhhcCC-----------ceEEEEEeCCCceEEEEeeCCeeccCCcEEecchHHHHHHHHHHHHHhc
Q 007655 265 FASAVVHQEGLAAVFGNGL-----------STACVVNMGAQVTSVICVEDGVALPNTEKTLPFGGEDISRCLLWTQRHH 332 (594)
Q Consensus 265 f~~v~~~~esvla~ygaG~-----------stg~VVDiG~~~TsV~pV~dG~vl~~s~~~l~~GG~dit~~l~~lL~~~ 332 (594)
+..|.+++|+++|+|+++. ...+|||||+.+|.++.+.+|.++......+++||..+++.+.+.++..
T Consensus 154 I~~V~v~pE~~~a~~~~~~~~~~~~~~~~~~~~~vvDiGggTtd~~v~~~~~~~~~~s~s~~~G~~~~~~~i~~~l~~~ 232 (355)
T 3js6_A 154 VKGVKIVAQPMGTLLDLNMENGKVFKAFTEGKYSVLDFGSGTTIIDTYQNMKRVEEESFVINKGTIDFYKRIASHVSKK 232 (355)
T ss_dssp EEEEEEEEHHHHHHHHTTEETTEECHHHHTCEEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHHTC--
T ss_pred EEEEEEEeCcHHHHHHHHHccCccccccccCcEEEEEeCCCcEEEEEEcCCEEccccccCcchHHHHHHHHHHHHHHHh
Confidence 4789999999999999863 3579999999999999999999988878889999999999999888653
No 25
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=97.13 E-value=0.00045 Score=70.97 Aligned_cols=71 Identities=10% Similarity=0.122 Sum_probs=58.2
Q ss_pred HhcCCCeEEEeehhhHHhhhcC-----CceEEEEEeCCCceEEEEeeCCee-ccCCcEEecchHHHHHHHHHHHHHh
Q 007655 261 RDLRFASAVVHQEGLAAVFGNG-----LSTACVVNMGAQVTSVICVEDGVA-LPNTEKTLPFGGEDISRCLLWTQRH 331 (594)
Q Consensus 261 E~~~f~~v~~~~esvla~ygaG-----~stg~VVDiG~~~TsV~pV~dG~v-l~~s~~~l~~GG~dit~~l~~lL~~ 331 (594)
+.++|..+.++.|+++|+++.+ ....+|||||+++|.++.+.+|.+ +..+...+++||+++++.+.+.+..
T Consensus 136 ~~~~i~~v~~~~e~~aa~~~~~~~~~~~~~~~vvDiGggttd~~v~~~g~~~v~~~~~~~~lGg~~~~~~I~~~l~~ 212 (320)
T 2zgy_A 136 DTFTIKDVKVMPESIPAGYEVLQELDELDSLLIIDLGGTTLDISQVMGKLSGISKIYGDSSLGVSLVTSAVKDALSL 212 (320)
T ss_dssp CCCEEEEEEEEESSHHHHHHHHHHSCTTCEEEEEEECSSCEEEEEEEGGGCCEEEEEEECSCCTHHHHHHHHHHTTC
T ss_pred cEEEEEEEEEecCcHHHHHhhhccccCCCCEEEEEcCCCeEEEEEEeCCeeEEeeecCCccccHHHHHHHHHHHHHH
Confidence 3456788999999999998864 246799999999999999999876 4334467799999999999987754
No 26
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=96.78 E-value=0.0014 Score=67.74 Aligned_cols=67 Identities=13% Similarity=0.125 Sum_probs=57.6
Q ss_pred CCeEEEeehhhHHhhhcC----CceEEEEEeCCCceEEEEeeCCeeccCCcEEecchHHHHHHHHHHHHHh
Q 007655 265 FASAVVHQEGLAAVFGNG----LSTACVVNMGAQVTSVICVEDGVALPNTEKTLPFGGEDISRCLLWTQRH 331 (594)
Q Consensus 265 f~~v~~~~esvla~ygaG----~stg~VVDiG~~~TsV~pV~dG~vl~~s~~~l~~GG~dit~~l~~lL~~ 331 (594)
+..|.+.+|++.|.|... ..+.+|||||+++|.++.+.+|.++......+++||+++++.+.+.++.
T Consensus 149 I~~v~v~pe~~ga~~~~~~~~~~~~v~vvDiGggTtd~~v~~~g~~~~~~~~~~~~G~~~~~~~i~~~l~~ 219 (329)
T 4apw_A 149 ITDITIKAEGSGVLFLEQENFKNKNVAVIDFGGLNMGFSLYRNCVVNPSERFIEEHGVKDLIIRVGDALTD 219 (329)
T ss_dssp EEEEEEEEHHHHHHHHSCCCCTTCEEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHTSSSS
T ss_pred EeEEEEEeccHHHHhhcchhhccCCEEEEEeCCCcEEEEEEECCEEeeccccchhhHHHHHHHHHHHHHHh
Confidence 467999999999998762 2467999999999999999999988776778999999999999876654
No 27
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=85.72 E-value=2.5 Score=42.84 Aligned_cols=42 Identities=19% Similarity=0.294 Sum_probs=36.2
Q ss_pred CceEEEEEeCCCceEEEEeeCCeeccCCcEEecchHHHHHHHHH
Q 007655 283 LSTACVVNMGAQVTSVICVEDGVALPNTEKTLPFGGEDISRCLL 326 (594)
Q Consensus 283 ~stg~VVDiG~~~TsV~pV~dG~vl~~s~~~l~~GG~dit~~l~ 326 (594)
...++|||||.++|.++-+.+|.+. ....+++|+-.+++.|.
T Consensus 137 ~~~~lvvDIGGGStEl~~~~~~~~~--~~~Sl~~G~v~l~e~~~ 178 (315)
T 1t6c_A 137 EGEVCVVDQGGGSTEYVFGKGYKVR--EVISLPIGIVNLTETFF 178 (315)
T ss_dssp CSEEEEEEEETTEEEEEEEETTEEE--EEEEECCCHHHHHHHHC
T ss_pred CCCEEEEEeCCCcEEEEEEeCCcee--eEEEEeccHHHHHHHhc
Confidence 4579999999999999999998775 35679999999998764
No 28
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=80.56 E-value=1.2 Score=45.54 Aligned_cols=25 Identities=24% Similarity=0.501 Sum_probs=23.3
Q ss_pred ceEEEEEeCCCceEEEEeeCCeecc
Q 007655 284 STACVVNMGAQVTSVICVEDGVALP 308 (594)
Q Consensus 284 stg~VVDiG~~~TsV~pV~dG~vl~ 308 (594)
.++++||||..+|.|+|+.+|.++.
T Consensus 127 ~~~llvDIGsTTTDIipi~~G~pl~ 151 (334)
T 3cet_A 127 ENCILVDMGSTTTDIIPIVEGKVVA 151 (334)
T ss_dssp SSEEEEEECSSCEEEEEEETTEECC
T ss_pred CCEEEEEcCcchhhhhhhcCCeecc
Confidence 5799999999999999999999975
No 29
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=78.79 E-value=0.31 Score=48.25 Aligned_cols=66 Identities=20% Similarity=0.302 Sum_probs=44.4
Q ss_pred CHHHHHHHHHhccCChhHHHHHhcCeEEEcCCCCcCChHHHHHHHHhhhCCCCCCcceEEEcCCCCCCceeEEeceeeec
Q 007655 471 GLAEAVTSSILSTGRIDLQRKLFCSIQLIGGVALTGGLIPAVEERVLHAIPSNEAIDMVEVLQSRTNPTYVSWKGGAVLG 550 (594)
Q Consensus 471 ~L~~~I~~sI~~~~~~d~r~~L~~nIvL~GG~S~ipGf~eRL~~eL~~~~p~~~~~~~V~v~~~~~dp~~~aW~GgSIla 550 (594)
++.++|.+.+... -.+......|+|+||.+..|++.++|++++.. ++.+. .+|.+.+=+||+++|
T Consensus 188 ~~~~~v~~~l~~~---~~~~~~~~~vvl~GGva~n~~lr~~l~~~~g~---------~~~~p---~~p~~~~A~GAAl~A 252 (276)
T 4ehu_A 188 GIHTSVAKRVSSL---VKRIGVQRNVVMVGGVARNSGIVRAMAREINT---------EIIVP---DIPQLTGALGAALYA 252 (276)
T ss_dssp HHHHHHHHHHHHH---HHHHCCCSSEEEESGGGGCHHHHHHHHHHHTS---------CEECC---SSGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH---HHhcccCCeEEEecCccchHHHHHHHHHHHCC---------CeeeC---CCcchHHHHHHHHHH
Confidence 4555555554332 22334457899999999999999999987732 23332 367777778999888
Q ss_pred c
Q 007655 551 I 551 (594)
Q Consensus 551 ~ 551 (594)
.
T Consensus 253 ~ 253 (276)
T 4ehu_A 253 F 253 (276)
T ss_dssp H
T ss_pred H
Confidence 4
No 30
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=78.39 E-value=2.3 Score=43.15 Aligned_cols=41 Identities=12% Similarity=0.243 Sum_probs=35.0
Q ss_pred ceEEEEEeCCCceEEEEeeCCeeccCCcEEecchHHHHHHHHH
Q 007655 284 STACVVNMGAQVTSVICVEDGVALPNTEKTLPFGGEDISRCLL 326 (594)
Q Consensus 284 stg~VVDiG~~~TsV~pV~dG~vl~~s~~~l~~GG~dit~~l~ 326 (594)
..++|||||.++|.++-+.+|.+. ....+++|.--+++.|.
T Consensus 131 ~~~lviDIGGGStEl~~~~~~~~~--~~~Sl~lG~vrl~e~f~ 171 (315)
T 3mdq_A 131 HISLAMDIGGGSVEFIIGNKNEIL--WKQSFEIGGQRLIDRFH 171 (315)
T ss_dssp CCEEEEEECSSCEEEEEECSSCEE--EEEEESCCHHHHHHHSC
T ss_pred CCEEEEEeCCCceEEEEEECCeEe--eeEEEechhhHHHHHhc
Confidence 569999999999999999998776 35689999998887653
No 31
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=76.98 E-value=2 Score=44.18 Aligned_cols=43 Identities=16% Similarity=0.227 Sum_probs=33.6
Q ss_pred ceEEEEEeCCCceEEEEeeC--Ceec--cCCcEEecchHHHHHHHHH
Q 007655 284 STACVVNMGAQVTSVICVED--GVAL--PNTEKTLPFGGEDISRCLL 326 (594)
Q Consensus 284 stg~VVDiG~~~TsV~pV~d--G~vl--~~s~~~l~~GG~dit~~l~ 326 (594)
..++|||||.++|.++-+.+ +.+. ......+++|+..+|+.+.
T Consensus 146 ~~~lviDIGGGStel~~~~~~~~~~~~~~~~~~SlplG~v~lt~~~~ 192 (343)
T 3cer_A 146 APYLVVDLGGGSTELVIGGDGVSAPTTQVQGAFSMNIGSVRMTERHL 192 (343)
T ss_dssp SSEEEEEECSSCEEEEECCCSSSSCTTSCSEEEEESCCHHHHHHHTC
T ss_pred CCEEEEEeCCCceEEEEeecCccCcccccceeEEEehhHHHHHHHhc
Confidence 46999999999999998877 3321 1135689999999998763
No 32
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=69.50 E-value=6.4 Score=42.68 Aligned_cols=40 Identities=13% Similarity=0.206 Sum_probs=34.8
Q ss_pred eEEEEEeCCCceEEEEeeCCeeccCCcEEecchHHHHHHHHH
Q 007655 285 TACVVNMGAQVTSVICVEDGVALPNTEKTLPFGGEDISRCLL 326 (594)
Q Consensus 285 tg~VVDiG~~~TsV~pV~dG~vl~~s~~~l~~GG~dit~~l~ 326 (594)
.++|||||.++|.++-..+|.+. ....+++|.--+|+.|.
T Consensus 138 ~~lviDIGGGStEl~~~~~~~~~--~~~Sl~lG~vrlte~f~ 177 (513)
T 1u6z_A 138 RKLVIDIGGGSTELVIGENFEPI--LVESRRMGCVSFAQLYF 177 (513)
T ss_dssp CEEEEEECSSCEEEEEEETTEEE--EEEEESCCHHHHHHHHS
T ss_pred CEEEEEECCCcEEEEEEeCCeee--EEEEEeccHHHHHHHHc
Confidence 69999999999999999888875 35679999999988763
No 33
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=67.22 E-value=8.7 Score=41.59 Aligned_cols=39 Identities=23% Similarity=0.321 Sum_probs=33.8
Q ss_pred ceEEEEEeCCCceEEEEeeCCeeccCCcEEecchHHHHHHH
Q 007655 284 STACVVNMGAQVTSVICVEDGVALPNTEKTLPFGGEDISRC 324 (594)
Q Consensus 284 stg~VVDiG~~~TsV~pV~dG~vl~~s~~~l~~GG~dit~~ 324 (594)
..++|||||.++|.++-+.+|.+. ....+++|.--+++.
T Consensus 140 ~~~lvvDIGGGStEl~~~~~~~~~--~~~Sl~lG~vrl~e~ 178 (508)
T 3hi0_A 140 PDGIAGDLGGGSLELIDIKDKSCG--EGITLPLGGLRLSEQ 178 (508)
T ss_dssp CEEEEEEECSSCEEEEEEETTEEC--CCEEESCCHHHHHHH
T ss_pred CCeEEEEeCCCceEEEEeeCCeee--eEEEecceEEehhhc
Confidence 467999999999999999999876 457899999888874
No 34
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=46.61 E-value=16 Score=37.47 Aligned_cols=35 Identities=14% Similarity=0.208 Sum_probs=25.9
Q ss_pred ceEEEEEeCCCceEEEEeeC--CeeccCCcEEecchH
Q 007655 284 STACVVNMGAQVTSVICVED--GVALPNTEKTLPFGG 318 (594)
Q Consensus 284 stg~VVDiG~~~TsV~pV~d--G~vl~~s~~~l~~GG 318 (594)
.+++|||||.++|.|+-..+ +.+.......+++||
T Consensus 140 ~t~~v~DiGGGStei~~~~~~~~~~~~~~~~sl~lG~ 176 (353)
T 3aap_A 140 KSVGVMDMGGASVQIVFPMPKNAEISKHNQVELNIYG 176 (353)
T ss_dssp SCEEEEEECSSEEEEEEECCCCTTSCGGGEEEEEETT
T ss_pred ccEEEEEeCCCceEEEEecCCccccCCCceEEEEECC
Confidence 47999999999999998744 334333346778877
No 35
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=45.11 E-value=2.9 Score=41.82 Aligned_cols=72 Identities=14% Similarity=0.021 Sum_probs=46.0
Q ss_pred CCHHHHHHHHHhccCChhHHHHHhcCeEEEcC-CCCcCChHHHHHHHHhhhCCCCCCcceEEEcCCCCCCceeEEeceee
Q 007655 470 IGLAEAVTSSILSTGRIDLQRKLFCSIQLIGG-VALTGGLIPAVEERVLHAIPSNEAIDMVEVLQSRTNPTYVSWKGGAV 548 (594)
Q Consensus 470 ~~L~~~I~~sI~~~~~~d~r~~L~~nIvL~GG-~S~ipGf~eRL~~eL~~~~p~~~~~~~V~v~~~~~dp~~~aW~GgSI 548 (594)
.+|..+|.+.|...+-.-.++.=..+|+++|| .+..|++.++|++.+... . .++.++ .++++..=+||++
T Consensus 214 asl~~sV~~~I~~la~~~a~~~~i~~Vvf~Gg~l~~n~~l~~~l~~~~~~~-~-----~~~~~p---~~~~~~gAlGAaL 284 (287)
T 2ews_A 214 AAVIGVVGEVVTTMAITVAREFKTENIVYIGSSFHNNALLRKVVEDYTVLR-G-----CKPYYV---ENGAFSGAIGALY 284 (287)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCEEEEESGGGTTCHHHHHHHHHHHHHT-T-----CEEEEC---TTGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCchhcCHHHHHHHHHHHhhC-C-----ceEEEC---CCccHHHHHHHHH
Confidence 35666666666433111112223357999999 899999999999876542 1 134443 4788888888877
Q ss_pred ec
Q 007655 549 LG 550 (594)
Q Consensus 549 la 550 (594)
++
T Consensus 285 ~~ 286 (287)
T 2ews_A 285 LE 286 (287)
T ss_dssp TC
T ss_pred hC
Confidence 65
No 36
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=35.53 E-value=12 Score=38.58 Aligned_cols=74 Identities=11% Similarity=0.031 Sum_probs=48.2
Q ss_pred CCHHHHHHHHHhccCChhHHHHHhcCeEEEcC-CCCcCChHHHHHHHHhhhCCCCCCcceEEEcCCCCCCceeEEeceee
Q 007655 470 IGLAEAVTSSILSTGRIDLQRKLFCSIQLIGG-VALTGGLIPAVEERVLHAIPSNEAIDMVEVLQSRTNPTYVSWKGGAV 548 (594)
Q Consensus 470 ~~L~~~I~~sI~~~~~~d~r~~L~~nIvL~GG-~S~ipGf~eRL~~eL~~~~p~~~~~~~V~v~~~~~dp~~~aW~GgSI 548 (594)
.+|..+|.+.|...+-.-.++.=..+|+++|| .+.-|++.+.|+..|.--..... ++.++ .+++++.=+||++
T Consensus 283 ~gll~sVa~~I~~lA~l~A~~~~i~~IvftGgfla~n~~~~~~L~~~l~~ws~g~~---~~~~~---~~~~y~GAlGAaL 356 (360)
T 2i7n_A 283 RATLVTITNNIGSIARMCALNENIDRVVFVGNFLRINMVSMKLLAYAMDFWSKGQL---KALFL---EHEGYFGAVGALL 356 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCCEEEESGGGCSSSHHHHHHHHHHHHHTTTSC---CEEEE---TTTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCcccccCHHHHHHHHHHHhhhhcCCe---eEEEc---CCccHHHHHHHHH
Confidence 46777777776554111124444568999999 89999999999999863222111 34444 3677887777765
Q ss_pred e
Q 007655 549 L 549 (594)
Q Consensus 549 l 549 (594)
+
T Consensus 357 ~ 357 (360)
T 2i7n_A 357 E 357 (360)
T ss_dssp H
T ss_pred H
Confidence 4
No 37
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=34.04 E-value=3.6 Score=42.34 Aligned_cols=45 Identities=18% Similarity=0.116 Sum_probs=30.4
Q ss_pred HHhcCeEEEcCCCCcCC--hHHHHHHHHhhhCCCCCCcceEEEcCCCCCCceeEEeceeeecc
Q 007655 491 KLFCSIQLIGGVALTGG--LIPAVEERVLHAIPSNEAIDMVEVLQSRTNPTYVSWKGGAVLGI 551 (594)
Q Consensus 491 ~L~~nIvL~GG~S~ipG--f~eRL~~eL~~~~p~~~~~~~V~v~~~~~dp~~~aW~GgSIla~ 551 (594)
+.+..|+|+||+|.++| +.+.|++++ |. . .+|+++.=+|..+++.
T Consensus 289 ~~~~~Ivl~GGGa~l~~~~l~~~i~~~~----~~---------~---~~p~~anA~G~~~~~~ 335 (355)
T 3js6_A 289 NSIDRIIVTGGGANIHFDSLSHYYSDVF----EK---------A---DDSQFSNVRGYEKLGE 335 (355)
T ss_dssp TSCSEEEEESTTHHHHHHHHHHHSSSCE----EC---------C---SSGGGHHHHHHHHHHH
T ss_pred hhccEEEEECcchhcchhhHHHHHHHHC----CC---------C---CCcHHHHHHHHHHHHH
Confidence 34578999999998877 555444322 11 1 4788888888777664
No 38
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=31.19 E-value=6.1 Score=39.72 Aligned_cols=47 Identities=21% Similarity=0.294 Sum_probs=29.7
Q ss_pred hcCeEEEcCCCCcCChHHHHHHHHhhhCCCCCCcceEEEcCCCCCCceeEEeceeeec
Q 007655 493 FCSIQLIGGVALTGGLIPAVEERVLHAIPSNEAIDMVEVLQSRTNPTYVSWKGGAVLG 550 (594)
Q Consensus 493 ~~nIvL~GG~S~ipGf~eRL~~eL~~~~p~~~~~~~V~v~~~~~dp~~~aW~GgSIla 550 (594)
...|+|+||+|.+ +.+.|++ .++... .++.+. .+|.+++=+|+.+++
T Consensus 273 ~~~vvl~GGga~l--l~~~l~~----~~~~~~--~~~~~~---~~P~~a~A~G~~~~~ 319 (320)
T 2zgy_A 273 YTHVMVIGGGAEL--ICDAVKK----HTQIRD--ERFFKT---NNSQYDLVNGMYLIG 319 (320)
T ss_dssp CCEEEEESTTHHH--HHHHHHH----TSCCCG--GGEECC---SCGGGHHHHHHHHHH
T ss_pred CCeEEEECChHHH--HHHHHHH----HhCCCC--CceeeC---CCcHHHHHHHHHHhc
Confidence 3679999999987 5544444 333210 023433 478888888877665
No 39
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=31.00 E-value=6 Score=40.41 Aligned_cols=32 Identities=13% Similarity=0.138 Sum_probs=24.4
Q ss_pred EEEEcCCCceeeeecCCCCCCCccceeEEEecC
Q 007655 20 LVVINPGSANIRIGLAQHDTPLNIPHCIARRTS 52 (594)
Q Consensus 20 ~iVihpGS~~lriG~asd~~P~~ip~~iA~~~~ 52 (594)
+|-|+.|..|.++-. .+-.-..+|++||....
T Consensus 23 ~igiDlG~~~tkv~~-~~g~~~~~PSvva~~~~ 54 (346)
T 2fsj_A 23 VVGLDVGYGDTKVIG-VDGKRIIFPSRWAVTET 54 (346)
T ss_dssp EEEEEECSSEEEEEC-GGGCEEEEESCEEEECC
T ss_pred EEEEecCCcceeEEe-cCCCEEEecceeeeccc
Confidence 589999999999974 33334467999997653
No 40
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=30.58 E-value=15 Score=37.10 Aligned_cols=46 Identities=17% Similarity=0.303 Sum_probs=30.5
Q ss_pred HhcCeEEEcCCCCcCChHHHHHHHHhhhCCCCCCcceEEEcCCCCCCceeEEeceeeecc
Q 007655 492 LFCSIQLIGGVALTGGLIPAVEERVLHAIPSNEAIDMVEVLQSRTNPTYVSWKGGAVLGI 551 (594)
Q Consensus 492 L~~nIvL~GG~S~ipGf~eRL~~eL~~~~p~~~~~~~V~v~~~~~dp~~~aW~GgSIla~ 551 (594)
+...|+|+||+|++ +.+.|++++ +. ++.+. .+|.++.=+|.-.++.
T Consensus 278 ~~~~IvltGGGA~l--~~~~l~~~~----~~-----~v~v~---~~P~~a~a~G~~~~~~ 323 (329)
T 4apw_A 278 QLDSLIFIGGTTQK--LKEQISKTY----PN-----NSIIT---NNSQWTTCEGLYKVAV 323 (329)
T ss_dssp SCSEEEEESTTHHH--HHHHHHHHS----TT-----CEECC---SSGGGHHHHHHHHHHH
T ss_pred HccEEEEECChHHH--HHHHHHHHc----CC-----CCEec---CCChhhHHHHHHHHHh
Confidence 46889999999998 556666554 21 23443 3788887777655543
No 41
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=24.09 E-value=1.3e+02 Score=28.94 Aligned_cols=52 Identities=10% Similarity=0.138 Sum_probs=40.5
Q ss_pred HHHHHHHhcCCCeEEEeehhhHHhhhc-----CCceEEEEEeCCCceEEEEeeCCeeccC
Q 007655 255 MLSIVLRDLRFASAVVHQEGLAAVFGN-----GLSTACVVNMGAQVTSVICVEDGVALPN 309 (594)
Q Consensus 255 l~ellfE~~~f~~v~~~~esvla~yga-----G~stg~VVDiG~~~TsV~pV~dG~vl~~ 309 (594)
+.+.| +.|++| |++.+++-++++|. +..+.++|-+|.+ +-..-|.+|.++..
T Consensus 87 l~~~l-~~~~~p-v~v~NDa~aaa~~e~~~~~~~~~~v~l~~GtG-iG~giv~~G~l~~G 143 (292)
T 2gup_A 87 WYEAL-SSYQLP-VHLENDANCVGLSELLAHPELENAACVVIGTG-IGGAMIINGRLHRG 143 (292)
T ss_dssp HHHHT-GGGCCC-EEEEEHHHHHHHHHHHHCTTCSSEEEEEESSS-EEEEEEETTEEECC
T ss_pred HHHHH-HHcCCC-EEEechHHHHHHHHHHhcCCCCeEEEEEECCc-eEEEEEECCEEEec
Confidence 55666 788887 88999999998873 5578999999986 45666778887754
No 42
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=23.74 E-value=8.2 Score=37.94 Aligned_cols=54 Identities=24% Similarity=0.316 Sum_probs=37.3
Q ss_pred cCeEEEcCCCCcCChHHHHHHHHhhhCCCCCCcceEEEcCCCCCCceeEEeceeeecccCCccccc
Q 007655 494 CSIQLIGGVALTGGLIPAVEERVLHAIPSNEAIDMVEVLQSRTNPTYVSWKGGAVLGILDFGRDAW 559 (594)
Q Consensus 494 ~nIvL~GG~S~ipGf~eRL~~eL~~~~p~~~~~~~V~v~~~~~dp~~~aW~GgSIla~L~sf~~~w 559 (594)
..|+++||+++-+++.+.|++.+.. +|.+. ..+.+..=+||+++|....-...|
T Consensus 210 ~~i~~~GG~a~n~~~~~~~~~~lg~---------~v~~p---~~~~~~~AlGAAl~A~~~~~~~~~ 263 (270)
T 1hux_A 210 KDVVMTGGVAQNYGVRGALEEGLGV---------EIKTS---PLAQYNGALGAALYAYKKAAKSAW 263 (270)
T ss_dssp SSEEEESGGGGCHHHHHHHHHHHCS---------CEECC---GGGGGHHHHHHHHHHHHHTTC---
T ss_pred CeEEEeCccccCHHHHHHHHHHHCC---------CeEeC---CCcchHhHHHHHHHHHHhhhcccc
Confidence 6799999999999999999988853 23332 356666677999888653334555
No 43
>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A*
Probab=23.59 E-value=32 Score=35.98 Aligned_cols=31 Identities=23% Similarity=0.370 Sum_probs=24.5
Q ss_pred ceEEEEEeCCCceEEEEeeCCeeccCCcEEec
Q 007655 284 STACVVNMGAQVTSVICVEDGVALPNTEKTLP 315 (594)
Q Consensus 284 stg~VVDiG~~~TsV~pV~dG~vl~~s~~~l~ 315 (594)
..-+|.-+|.+. |+|.|.+|.++..+.--.+
T Consensus 210 ~~lIv~HLGnGa-Si~Ai~~GksVDTsMG~Tp 240 (415)
T 2e1z_A 210 SGLIVAHLGNGA-SICAVRNGQSVDTSMGMTP 240 (415)
T ss_dssp CEEEEEEESSSE-EEEEEETTEEEEESCCSST
T ss_pred cCEEEEEeCCch-hhhheeCCEEEecCCCCCC
Confidence 367889999986 9999999999976643333
No 44
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=23.00 E-value=1.2e+02 Score=29.58 Aligned_cols=48 Identities=8% Similarity=-0.001 Sum_probs=34.8
Q ss_pred EEEEEeCCCceEEEEeeCCeeccCCcEEec-chHHHHHHHHHHHHHhcC
Q 007655 286 ACVVNMGAQVTSVICVEDGVALPNTEKTLP-FGGEDISRCLLWTQRHHQ 333 (594)
Q Consensus 286 g~VVDiG~~~TsV~pV~dG~vl~~s~~~l~-~GG~dit~~l~~lL~~~~ 333 (594)
-++||||.+.+....+.+|..+...+...+ ...+.+...+..++...+
T Consensus 4 lL~IDIGNT~iK~gl~d~~~l~~~~r~~T~~~t~de~~~~l~~ll~~~~ 52 (266)
T 3djc_A 4 ILCIDVGNSHIYGGVFDGDEIKLRFRHTSKVSTSDELGIFLKSVLRENN 52 (266)
T ss_dssp EEEEEECSSEEEEEEEETTEEEEEEEEECSCCCHHHHHHHHHHHHHTTT
T ss_pred EEEEEECCCeEEEEEEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHcC
Confidence 489999999999999988877755444333 446667667777776543
No 45
>1g99_A Acetate kinase; alpha/beta, askha (acetate and sugar kinases, HSC70, actin) superfamily, conserved epsilon conformation; HET: ADP; 2.50A {Methanosarcina thermophila} SCOP: c.55.1.2 c.55.1.2 PDB: 1tuu_A* 1tuy_A*
Probab=20.62 E-value=37 Score=35.43 Aligned_cols=31 Identities=19% Similarity=0.331 Sum_probs=24.4
Q ss_pred ceEEEEEeCCCceEEEEeeCCeeccCCcEEec
Q 007655 284 STACVVNMGAQVTSVICVEDGVALPNTEKTLP 315 (594)
Q Consensus 284 stg~VVDiG~~~TsV~pV~dG~vl~~s~~~l~ 315 (594)
..-+|.-+|.+. |+|.|.+|.++..+.--.+
T Consensus 202 ~~lIv~HLGnGa-Si~Ai~~GksVDTsMG~Tp 232 (408)
T 1g99_A 202 TKIITCHLGNGS-SITAVEGGKSVETSMGFTP 232 (408)
T ss_dssp CEEEEEEESSSE-EEEEEETTEEEEESCCSST
T ss_pred CCEEEEEeCCcc-chhheECCEEEEeCCCCCC
Confidence 367888999986 9999999999976644333
No 46
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=20.57 E-value=73 Score=33.77 Aligned_cols=35 Identities=20% Similarity=0.270 Sum_probs=24.0
Q ss_pred ceEEEEEeCCCceEEEEeeCCee-ccCCcEEecchH
Q 007655 284 STACVVNMGAQVTSVICVEDGVA-LPNTEKTLPFGG 318 (594)
Q Consensus 284 stg~VVDiG~~~TsV~pV~dG~v-l~~s~~~l~~GG 318 (594)
.+..|+|+|.++|.|+-+.++.. -+.....+.++|
T Consensus 190 ~t~gvlDlGGgStqi~~~~~~~~~~~~~~~~l~l~g 225 (456)
T 3cj1_A 190 GTLGAMDLGGASTQITFETTSPSEDPGNEVHLRLYG 225 (456)
T ss_dssp CCCEEEEECSSEEEEEEECCSCCSCGGGEEEEEETT
T ss_pred CceEEEEcCCCceEEEeccCCccCCCCceEEEEeCC
Confidence 46789999999999999876642 123334455444
Done!