Your job contains 1 sequence.
>007659
MTEDSHHTFSSDDSAISTDGSSQTRQRKKRKWDQPAESLINFPLASFGISLPGVPVAPVV
PAPAAAAFFTNPPVASGATVPPVVLQGPLPPKFNQPKVQDELIIAREIVINDSESSVRYK
LTKRHTQEEIQKCTGAVVITRGKYRLPNAPPDGEKPLYLHISAGAHLKETAERILAVDHA
AAMVEEMLKQGHAGFPTLQTVMGNGVQAMSTSVFLGFDADASLNIAARIRGPNLSLTSPY
NWERLFFCWCFRLYMQDQYINHIMNETGATVLLRGRGSGNSEGLQGEEVHQPLHLFLSSN
NPKSLEEAKRLAENLLDTISAECGASRVSSCKVYNAVPPPQQLLTGIQGFGNEQKLNAGS
AVILTSTVNLSSVPLAPSVPGVTTVYSQGMMLQSGGILNSVQPQQNIVGYPQPVSTGGTS
YSGYEGIYPQATPLQQVALALRQSSSPLTSLVAPTASVSSTATTSTTSTAMSEKEKRPPQ
KRKFQELPVGSKGPAKHNQGSEIPNRSELSANLDVRNVSNMPPPSKLVQPVDNGMPHPPP
RNMPPPPPPKFTLLAPTAKLHDKNNSLNKTKSDNIPVVSDTLVKLMEYGEDDDD
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 007659
(594 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2093792 - symbol:RIK "RS2-interacting KH prote... 588 1.7e-115 3
UNIPROTKB|Q32SG5 - symbol:Q32SG5 "Protein RIK" species:45... 467 8.0e-100 3
MGI|MGI:1921450 - symbol:2810403A07Rik "RIKEN cDNA 281040... 257 1.2e-18 2
POMBASE|SPAC30D11.14c - symbol:SPAC30D11.14c "RNA-binding... 135 1.3e-09 2
ASPGD|ASPL0000075827 - symbol:AN4431 species:162425 "Emer... 109 2.5e-09 3
>TAIR|locus:2093792 [details] [associations]
symbol:RIK "RS2-interacting KH protein" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0008150 "biological_process" evidence=ND] [GO:0003723 "RNA
binding" evidence=TAS] InterPro:IPR004087 PROSITE:PS50084
SMART:SM00322 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003723 EMBL:AP001309 eggNOG:NOG304543 EMBL:AY940684
EMBL:AY065141 EMBL:AY081591 IPI:IPI00538701 IPI:IPI00866787
RefSeq:NP_566850.3 UniGene:At.21201 ProteinModelPortal:Q9LIA4
SMR:Q9LIA4 IntAct:Q9LIA4 STRING:Q9LIA4 EnsemblPlants:AT3G29390.1
GeneID:822600 KEGG:ath:AT3G29390 TAIR:At3g29390
HOGENOM:HOG000239854 InParanoid:Q9LIA4 OMA:YPQATPL PhylomeDB:Q9LIA4
ProtClustDB:CLSN2680882 Genevestigator:Q9LIA4 Uniprot:Q9LIA4
Length = 578
Score = 588 (212.0 bits), Expect = 1.7e-115, Sum P(3) = 1.7e-115
Identities = 156/365 (42%), Positives = 195/365 (53%)
Query: 257 DQYINHIMNETGATVLLRGRGSGNSEGLQGEEVHQPLHLFLSSNNPKSLEEAKRLAENLL 316
DQYINHIMNETGATV+LRGRGSG+ E G+E PLHL LS +NPKS+++AKRLAENL+
Sbjct: 218 DQYINHIMNETGATVVLRGRGSGSLENQHGDEAQLPLHLLLSGSNPKSIDDAKRLAENLM 277
Query: 317 DTISAECGASRVSSCKVYNAVPPPQQLLTGIQGFGNEQKLNAGSAVILTSTVNLSSVPLA 376
DTIS E GASRVSS KVY AVPPPQQL++G G E + N S L +++ +++ P A
Sbjct: 278 DTISVEFGASRVSSSKVYGAVPPPQQLISGAPGSDQENQ-NLISTYGLMTSIPITAPPYA 336
Query: 377 PS---VPGVTTVYSQGMMLQSGGILNSVQPQQNIVGYPQPVXXXXXXXXXXEGIYPQATP 433
S V T++Y Q ++QS GI N G QPV GIYPQATP
Sbjct: 337 VSSFPVTPATSLYPQFPVMQSLGISNG--------GPSQPVAGGTSYSGYA-GIYPQATP 387
Query: 434 LQQVALALRQSSSPLXXXXXXXXXXXXXXXXXXXXXXXXEKEKRPPQKRKFQELPVGSKG 493
LQQVA L+QS SP+ E E+RPP+KRKFQELP K
Sbjct: 388 LQQVAQVLKQSISPVISTVPPTMLTATSLSIPSDNASN-EMERRPPRKRKFQELPADCKV 446
Query: 494 PAKHNQGSEIPNRSEL--SANL-----DVRNVSNMPPPSKLVQPVDNGMXXXXXXX---- 542
P K Q SE+ ++ SAN R+V PPP + P M
Sbjct: 447 PEKDKQQSELAMTGDVTPSANRVRSPPSPRSVMPPPPPKTIAPPPSKTMSPPSSKSMLPP 506
Query: 543 -----XXXXXXXK--------FTLLAPTAKLHDKNNSLNKTKSDNIPVVSDTLVKLMEYG 589
K FTL ++L D N ++ K + +P DTL+KLMEYG
Sbjct: 507 PPRSKTMSPLSSKSMLPPPPRFTLTTQRSRLQD--NHISVKKPNPVP---DTLIKLMEYG 561
Query: 590 EDDDD 594
+D+DD
Sbjct: 562 DDEDD 566
Score = 485 (175.8 bits), Expect = 1.7e-115, Sum P(3) = 1.7e-115
Identities = 103/147 (70%), Positives = 119/147 (80%)
Query: 92 KFNQPKVQDELIIAREIVINDSESSVRYKLTKRHTQEEIQKCTGAVVITRGKYRLPNAPP 151
K NQPK+QDE+IIAREIVIND+E+S+R++LTKR TQE+IQ+ TGAVVITRGKYR PNAPP
Sbjct: 76 KVNQPKIQDEVIIAREIVINDAEASLRHRLTKRSTQEDIQRSTGAVVITRGKYRPPNAPP 135
Query: 152 DGEKPLYLHISAGAHL--KETAERILAVDHAAAMVEEMLKQ---GHAGFPTLQTVMGNGV 206
DGEKPLYLHISA A L KET ERILAVD AAAM+EEM+KQ G LQTV
Sbjct: 136 DGEKPLYLHISAAAQLQLKETTERILAVDRAAAMIEEMMKQKSISQIGSVGLQTV----- 190
Query: 207 QAMSTSVFLGFDADASLNIAARIRGPN 233
+ +ST V+LGF+AD S N+AARIRGPN
Sbjct: 191 KMLSTCVYLGFEADPSSNVAARIRGPN 217
Score = 100 (40.3 bits), Expect = 1.7e-115, Sum P(3) = 1.7e-115
Identities = 19/40 (47%), Positives = 28/40 (70%)
Query: 1 MTEDSHHTFSSDDSAISTDGSSQTRQRKKRKWDQPAESLI 40
MTED+ + +T+ +S+TRQR+KRKWD+PAE L+
Sbjct: 1 MTEDNDEARVPLSDSSTTNDASRTRQRRKRKWDKPAEQLV 40
>UNIPROTKB|Q32SG5 [details] [associations]
symbol:Q32SG5 "Protein RIK" species:4577 "Zea mays"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR004087
PROSITE:PS50084 SMART:SM00322 GO:GO:0005634 GO:GO:0003723
EMBL:AY940679 RefSeq:NP_001105836.1 UniGene:Zm.14958
ProteinModelPortal:Q32SG5 IntAct:Q32SG5 GeneID:732737
KEGG:zma:732737 Gramene:Q32SG5 Uniprot:Q32SG5
Length = 616
Score = 467 (169.5 bits), Expect = 8.0e-100, Sum P(3) = 8.0e-100
Identities = 97/145 (66%), Positives = 110/145 (75%)
Query: 92 KFNQPKVQDELIIAREIVINDSESSVRYKLTKRHTQEEIQKCTGAVVITRGKYRLPNAPP 151
K +Q K+ DE +IAREIVIND++ SVRYKLTKR TQEEIQKCT V+ITRGKY PN P
Sbjct: 100 KLSQAKIPDE-VIAREIVINDADPSVRYKLTKRQTQEEIQKCTNTVIITRGKYHPPNLLP 158
Query: 152 DGEKPLYLHISAGAHLKETAERILAVDHAAAMVEEMLKQGHAGFPT---LQTVMGNGVQA 208
DGEKPLYLHISAG+ LK+TAERI AVD AA+M+EE+LKQG + G V+
Sbjct: 159 DGEKPLYLHISAGSQLKDTAERIKAVDRAASMIEEILKQGTTSESISVPFSSSTGQAVRP 218
Query: 209 MSTSVFLGFDADASLNIAARIRGPN 233
S SVFLGFDAD SLNI ARIRGPN
Sbjct: 219 FSASVFLGFDADPSLNITARIRGPN 243
Score = 460 (167.0 bits), Expect = 8.0e-100, Sum P(3) = 8.0e-100
Identities = 122/285 (42%), Positives = 155/285 (54%)
Query: 257 DQYINHIMNETGATVLLRGRGSGNSEGLQGEEVHQPLHLFLSSNNPKSLEEAKRLAENLL 316
DQYINHIM ETG TV+LRG+ S N E QPLHL+L+S + K+LE AK LAENLL
Sbjct: 244 DQYINHIMKETGVTVVLRGKDSENLGSCHSEASQQPLHLYLTSMHLKNLEAAKVLAENLL 303
Query: 317 DTISAECGASRVSSCKVYNAVPPPQQLLTGIQGFGNEQKLN--AGSAVILTSTVNLSSVP 374
DT++AE GASR+SS KVY AVPPPQQLL G+ G + ++ G V+ +T + +S
Sbjct: 304 DTVAAEFGASRISSSKVYGAVPPPQQLLAGVDTSGTKSDVHYIVGPNVLSGATHSFASTG 363
Query: 375 -LAPSVPGVTTVYSQGMMLQSGGILNSVQPQQNIVGYPQPVXXXXXXXXXXEGIYPQATP 433
+AP V TV QSG S P + + YP P IYPQATP
Sbjct: 364 VIAPVVAPAVTV-------QSGAPTYSGVPLPSNMAYPIPPANGGAFYSGYGDIYPQATP 416
Query: 434 LQQVALALRQSSSPLXXXXXXXXXXXXXXXXXXXXXXXXEKEKRPPQKRKFQELPVGSKG 493
LQQ+A L+ +SS E +KR +RKFQELPV SKG
Sbjct: 417 LQQLAFTLKHASSS-ATQAVPVTSTPTSMATKGNSILDAEMDKR--SRRKFQELPV-SKG 472
Query: 494 PAKHNQGSEIPNRSELSANLDVR-NV--SNMPPPSKLVQPVDNGM 535
PA +Q S+ ++ + LD N+ S++ PP K V P NGM
Sbjct: 473 PATESQNSQQGSKF-VKTGLDSSGNIGSSSIAPPKK-VHPGSNGM 515
Score = 97 (39.2 bits), Expect = 8.0e-100, Sum P(3) = 8.0e-100
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 1 MTEDSHHTFSSDDSAISTDGSSQTRQRKKRKWDQPAESLINFPLASFGIS 50
MTED H + D+ A S Q+ +RKKRKWDQPAE L++ + + +S
Sbjct: 1 MTEDRAHKVA-DEPAAS---GRQSPERKKRKWDQPAEDLVSAAVTAAAVS 46
>MGI|MGI:1921450 [details] [associations]
symbol:2810403A07Rik "RIKEN cDNA 2810403A07 gene"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] MGI:MGI:1921450
EMBL:AK173057 EMBL:AK012969 EMBL:AK020778 EMBL:AK038617
EMBL:AK083018 EMBL:AK164337 EMBL:AK170490 EMBL:BC006621
IPI:IPI00112125 IPI:IPI00473448 IPI:IPI00855074 IPI:IPI00855148
RefSeq:NP_083090.2 UniGene:Mm.251800 ProteinModelPortal:Q3TCX3
SMR:Q3TCX3 STRING:Q3TCX3 PhosphoSite:Q3TCX3 PRIDE:Q3TCX3
Ensembl:ENSMUST00000029696 GeneID:74200 KEGG:mmu:74200
UCSC:uc008pwe.2 UCSC:uc008pwf.2 UCSC:uc008pwg.2 eggNOG:NOG304543
GeneTree:ENSGT00510000047412 HOGENOM:HOG000067879
HOVERGEN:HBG099830 InParanoid:Q3TCX3 OMA:TGQSPMS OrthoDB:EOG4N30NT
NextBio:340086 Bgee:Q3TCX3 CleanEx:MM_2810403A07RIK
Genevestigator:Q3TCX3 Uniprot:Q3TCX3
Length = 612
Score = 257 (95.5 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 83/257 (32%), Positives = 129/257 (50%)
Query: 97 KVQDELIIAREIVINDSESSVRYKLTKRHTQEEIQKCTGAVVITRGKYRLPNAPPD---G 153
K +D+L++A E+ IND + R LT+ TQ+EI + +GA V TRG++ G
Sbjct: 99 KSKDDLVVA-EVEINDVPLTCRNLLTRGQTQDEISRLSGAAVSTRGRFMTTEEKAKVGPG 157
Query: 154 EKPLYLHISAGAHLKETAERILAVDHAAAMVEEMLKQGHAGFPTLQTVMGNGVQAMSTSV 213
++PLYLH+ +T E VD A ++E++ G T + NG + +V
Sbjct: 158 DRPLYLHVQG-----QTRE---LVDRAVNRIKEIITNGVVKAATGTSPTFNGA---TVTV 206
Query: 214 FLGFDADASLNIAARIRGPNLSLTSPYNWERLFFCW-----CFRLYMQDQ-----YINHI 263
+ A L+ A + P+ Y ++LF F + + + Y+ HI
Sbjct: 207 YHQPAPIAQLSPAINQK-PSFQSGMHYVQDKLFVGLEHAVPTFNVKEKVEGPGCSYLQHI 265
Query: 264 MNETGATVLLRGRGSGNSEGLQGEEVHQPLHLFLSSNNPKSLEEAKRLAENLLDTISAEC 323
ETGA V LRG+GSG E G E +P+++++S P+ L AK+L ENLL T+ AE
Sbjct: 266 QIETGAKVFLRGKGSGCIEPASGREAFEPMYIYISHPKPEGLAAAKKLCENLLQTVHAEY 325
Query: 324 GASRVSSCKVYNAVPPP 340
SR + ++ AVP P
Sbjct: 326 --SRFVN-QINTAVPLP 339
Score = 40 (19.1 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 7/9 (77%), Positives = 7/9 (77%)
Query: 334 YNAVPPPQQ 342
Y VPPPQQ
Sbjct: 366 YPVVPPPQQ 374
>POMBASE|SPAC30D11.14c [details] [associations]
symbol:SPAC30D11.14c "RNA-binding protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003723 "RNA binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0045292 "mRNA
cis splicing, via spliceosome" evidence=NAS] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 SMART:SM00322 PomBase:SPAC30D11.14c
GO:GO:0005634 EMBL:CU329670 GO:GO:0003723 GO:GO:0045292
eggNOG:NOG304543 PIR:T38585 RefSeq:NP_593203.1
ProteinModelPortal:Q09911 EnsemblFungi:SPAC30D11.14c.1
GeneID:2542249 KEGG:spo:SPAC30D11.14c OMA:DIDINDQ OrthoDB:EOG4VDT7M
NextBio:20803314 Uniprot:Q09911
Length = 534
Score = 135 (52.6 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 40/145 (27%), Positives = 69/145 (47%)
Query: 256 QDQYINHIMNETGATVLLRGRGSGNSEGLQGEEVHQPLHLFLSSNNPKSLEEAKRLAENL 315
Q Y+ HI ET V ++G+GS E E +P+HL + S++P +++ AK L E+L
Sbjct: 313 QGAYVKHIQQETRTRVQIKGQGSAFIEPSTNRESDEPIHLCIMSHDPNAIQRAKVLCEDL 372
Query: 316 LDTISAECGA--------SRVSSCKVYNAVPPPQQLLTGIQGFGNE--QKLNAGSAVILT 365
+ ++ + A + + YN PP + + E Q NA A ++T
Sbjct: 373 IASVHQQYKAWKSQPKDRDQNQGNRAYN--PPNRNQAFSARDSRQEKTQPTNASPAPLVT 430
Query: 366 STVNLSSVPLAPSV------PGVTT 384
++ + S+P P + PGVT+
Sbjct: 431 PSLPVPSIPAVPGMEAMAMPPGVTS 455
Score = 83 (34.3 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 20/66 (30%), Positives = 37/66 (56%)
Query: 98 VQDELIIAREIVINDSESSVRYKLTKRHTQEEIQKCTGAVVITRGKYRLPNAP--PDGEK 155
++ + + +++ IN+ + RY L + T EI+ +G + ++G+Y PN D +
Sbjct: 160 IEGDGVFMQDVEINNVRN--RYILVRASTLSEIENKSGVQLFSKGRY-YPNKALATDKDP 216
Query: 156 PLYLHI 161
PLYLHI
Sbjct: 217 PLYLHI 222
>ASPGD|ASPL0000075827 [details] [associations]
symbol:AN4431 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 GO:GO:0003723 EMBL:BN001303
EnsemblFungi:CADANIAT00006023 HOGENOM:HOG000188522 OMA:QIKGRGS
Uniprot:C8V8Q8
Length = 466
Score = 109 (43.4 bits), Expect = 2.5e-09, Sum P(3) = 2.5e-09
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 259 YINHIMNETGATVLLRGRGSGNSEGLQGEEVHQPLHLFLSSNNPKSLEEAKRLAENLLDT 318
Y+ HI +T V ++GRGSG E G E ++L ++ +P ++ AK L E+LL+
Sbjct: 255 YVKHIQQQTRCKVQIKGRGSGFLEPSTGRESDDAMYLHVAGPDPNEVQRAKALCEDLLNN 314
Query: 319 I 319
+
Sbjct: 315 V 315
Score = 108 (43.1 bits), Expect = 2.5e-09, Sum P(3) = 2.5e-09
Identities = 32/86 (37%), Positives = 49/86 (56%)
Query: 106 REIVINDSESSVRYKLTKRHTQEEIQKCTGAVVITRGKYRLPNAPPDGEKP-LYLHISAG 164
++I IND + RY LTK TQ+ I+ TGA V TRG Y + P LYLH+++
Sbjct: 123 KDIEINDLRN--RYTLTKGSTQKMIKDETGADVTTRGNYYPDKSMATAANPPLYLHVTST 180
Query: 165 AHLKETAERILAVDHAAAMVEEMLKQ 190
+ KE E+ A A++E+++K+
Sbjct: 181 S--KEGLEK------AVALIEDLMKK 198
Score = 38 (18.4 bits), Expect = 2.5e-09, Sum P(3) = 2.5e-09
Identities = 7/10 (70%), Positives = 8/10 (80%)
Query: 334 YNAVPPPQQL 343
Y+AVPPP L
Sbjct: 457 YSAVPPPPGL 466
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.130 0.371 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 594 510 0.00087 119 3 11 23 0.46 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 5
No. of states in DFA: 610 (65 KB)
Total size of DFA: 272 KB (2144 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 44.20u 0.11s 44.31t Elapsed: 00:00:03
Total cpu time: 44.20u 0.11s 44.31t Elapsed: 00:00:03
Start: Fri May 10 06:39:53 2013 End: Fri May 10 06:39:56 2013