Query 007664
Match_columns 594
No_of_seqs 110 out of 121
Neff 4.0
Searched_HMMs 13730
Date Mon Mar 25 07:26:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007664.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/007664hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1fxka_ a.2.5.1 (A:) Prefoldin 58.6 36 0.0026 27.2 10.0 29 500-528 74-102 (107)
2 d2pv4a1 a.286.1.1 (A:1-144) Un 26.1 13 0.00095 32.4 1.9 18 128-145 114-131 (144)
3 d1ufza_ a.5.9.1 (A:) HBS1-like 19.1 28 0.002 27.9 2.4 41 123-163 24-67 (83)
4 d2efla1 a.238.1.4 (A:1-288) Fo 13.1 3.7E+02 0.027 22.7 21.5 147 402-564 117-264 (288)
5 d1qsda_ a.7.5.1 (A:) Tubulin c 11.5 3.5E+02 0.025 21.5 8.4 62 387-451 13-81 (102)
6 d1nlwa_ a.38.1.1 (A:) Mad prot 7.7 3.9E+02 0.028 19.4 6.0 35 391-425 42-76 (79)
7 d1k1fa_ a.147.1.1 (A:) Bcr-Abl 7.3 2.3E+02 0.017 21.3 4.3 25 515-539 29-53 (67)
8 d1seta1 a.2.7.1 (A:1-110) Sery 7.1 4.8E+02 0.035 19.9 9.2 57 498-560 28-84 (110)
9 d1r5qa_ a.186.1.1 (A:) Circadi 6.2 42 0.0031 27.3 -0.6 8 345-352 54-61 (98)
10 d1xkpc1 d.198.1.1 (C:2-127) Ch 5.6 1E+02 0.0076 26.0 1.5 14 131-144 63-77 (126)
No 1
>d1fxka_ a.2.5.1 (A:) Prefoldin beta subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=58.58 E-value=36 Score=27.18 Aligned_cols=29 Identities=7% Similarity=0.270 Sum_probs=13.9
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Q 007664 500 VKSAKSKKEAAESRLRAVEAEMETLRSKV 528 (594)
Q Consensus 500 L~a~~a~kkelEsqLe~~EaEa~~L~~KV 528 (594)
++-+....+.++.++..++.++..+..++
T Consensus 74 ~e~l~~~i~~l~~q~~~l~~~l~~~~~~l 102 (107)
T d1fxka_ 74 LETLQLREKTIERQEERVMKKLQEMQVNI 102 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334444445555555555555554444
No 2
>d2pv4a1 a.286.1.1 (A:1-144) Uncharacterized protein Sama2622 {Shewanella amazonensis [TaxId: 60478]}
Probab=26.14 E-value=13 Score=32.43 Aligned_cols=18 Identities=44% Similarity=0.756 Sum_probs=15.6
Q ss_pred hhhHHHHHHHHHHHhhHH
Q 007664 128 LDGALKECVRQLRQAREE 145 (594)
Q Consensus 128 LD~ALKeCmrQLr~~rEE 145 (594)
+|..||+|++||..+|-+
T Consensus 114 ~~~~lKd~~KqLKKAR~D 131 (144)
T d2pv4a1 114 AEAALKESVKKLKKARTD 131 (144)
T ss_dssp HHTHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHccC
Confidence 578999999999988853
No 3
>d1ufza_ a.5.9.1 (A:) HBS1-like protein {Mouse (Mus musculus) [TaxId: 10090]}
Probab=19.12 E-value=28 Score=27.86 Aligned_cols=41 Identities=20% Similarity=0.484 Sum_probs=30.4
Q ss_pred hhhhchhhH-HHHHHHHHHHhhHH--HHHHHHHHHHHHhhhHhh
Q 007664 123 NRVSHLDGA-LKECVRQLRQAREE--QEQRIQETVSKQNLEWES 163 (594)
Q Consensus 123 ~rv~hLD~A-LKeCmrQLr~~rEE--qEqki~eav~kks~e~e~ 163 (594)
..++.+|.| |-.||.|+|.+==+ -++.|.+||++---.+++
T Consensus 24 ~~Ls~~d~aRL~SCldqmR~VvGDsvpe~~lv~avlk~dydvek 67 (83)
T d1ufza_ 24 HQLSEIDQARLYSCLDHMREVLGDAVPDDILTEAILKHKFDVQK 67 (83)
T ss_dssp HHCCHHHHHHHHHHHHHHHHHTTTTSCHHHHHHHHHHTTSCHHH
T ss_pred hhcCHHHHHHHHHHHHHHHHHHcccCCHHHHHHHHHHccCCHHH
Confidence 446778888 99999999976544 577888888876544443
No 4
>d2efla1 a.238.1.4 (A:1-288) Formin-binding protein 1, FNBP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=13.07 E-value=3.7e+02 Score=22.69 Aligned_cols=147 Identities=11% Similarity=0.105 Sum_probs=65.6
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhhhhhhhhhhHHHH
Q 007664 402 EEELENMRAEKSELEMDLKESQRRLETSQNQLKEAELKLEELETQLAFANKSKQAVEVEMKAAIAARGVAESKLSVVEAE 481 (594)
Q Consensus 402 EeKleklEaEK~eLE~aL~~~~~qle~S~~~L~Eae~kL~ELQ~QL~~aN~sk~~~e~~ve~~~~~~~~lEskl~~~eaE 481 (594)
.....++..+.......+.+++..+...|..+..+...+..++.. ......++.-+..+......++.-++.+
T Consensus 117 ~~~~~k~~k~~~~~~~~l~k~k~~Y~~~~~e~e~~~~~~~~~~~~-------~~~~~~~~~K~~~k~~~~~~~~~~a~~~ 189 (288)
T d2efla1 117 FHDGRKAQQHIETCWKQLESSKRRFERDCKEADRAQQYFEKMDAD-------INVTKADVEKARQQAQIRHQMAEDSKAD 189 (288)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-------TTSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc-------cccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444444444455555555555555555554443333332221 1111122222233333334444445555
Q ss_pred HHHHHHHHHhhHHHHH-HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhcHHHHHHhHHHHHHHhhhh
Q 007664 482 MKTQLALANKSKQAAE-EEVKSAKSKKEAAESRLRAVEAEMETLRSKVISLEDEVEKERALSEENIANFQKSKDELSKVK 560 (594)
Q Consensus 482 ik~~L~la~eS~s~~~-eeL~a~~a~kkelEsqLe~~EaEa~~L~~KV~sLE~EIekERalS~E~~aKC~~LEeeLsr~k 560 (594)
....+...+.....++ +.|-..-. .+..++.+ .+..-...|..=..-+..+......-|..|...+....
T Consensus 190 Y~~~v~~~n~~~~~~~~~~~~~~~~-------~~q~~e~~--r~~~~k~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~id 260 (288)
T d2efla1 190 YSSILQKFNHEQHEYYHTHIPNIFQ-------KIQEMEER--RIVRMGESMKTYAEVDRQVIPIIGKCLDGIVKAAESID 260 (288)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHH-------HHHHHHHH--HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHH--HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHCC
Confidence 5544555554444432 22322222 22222222 22222233333345566666777777888888888776
Q ss_pred HHHH
Q 007664 561 QEIE 564 (594)
Q Consensus 561 ~e~e 564 (594)
..-+
T Consensus 261 ~~~D 264 (288)
T d2efla1 261 QKND 264 (288)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4433
No 5
>d1qsda_ a.7.5.1 (A:) Tubulin chaperone cofactor A {Baker's yeast (Saccharomyces cerevisiae), Rbl2p [TaxId: 4932]}
Probab=11.50 E-value=3.5e+02 Score=21.54 Aligned_cols=62 Identities=19% Similarity=0.243 Sum_probs=45.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhh-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 007664 387 IKAELEVLIHRTAELEEELENMRAE-------KSELEMDLKESQRRLETSQNQLKEAELKLEELETQLAFAN 451 (594)
Q Consensus 387 l~~ElE~~~~qvaeLEeKleklEaE-------K~eLE~aL~~~~~qle~S~~~L~Eae~kL~ELQ~QL~~aN 451 (594)
|--|...+...+..-+.++++|+++ ....+..|.+++.=+--++.+|..+ ..+|+.-|+..+
T Consensus 13 L~KE~~~Y~kE~~~q~~kv~k~kad~~~dey~iKkq~evL~Es~~mipd~~~RL~~a---~~~L~~~l~~~~ 81 (102)
T d1qsda_ 13 LTKEEGYYQQELKDQEAHVAKLKEDKSVDPYDLKKQEEVLDDTKRLLPTLYEKIREF---KEDLEQFLKTYQ 81 (102)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHhhHHHHHHHHH---HHHHHHHHHHcC
Confidence 3447778888999999999999864 2346677888888888888888877 666666665544
No 6
>d1nlwa_ a.38.1.1 (A:) Mad protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.73 E-value=3.9e+02 Score=19.40 Aligned_cols=35 Identities=14% Similarity=0.170 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 007664 391 LEVLIHRTAELEEELENMRAEKSELEMDLKESQRR 425 (594)
Q Consensus 391 lE~~~~qvaeLEeKleklEaEK~eLE~aL~~~~~q 425 (594)
|..++.-|..|+.++..+..++..|......++.+
T Consensus 42 L~~A~~yI~~L~~~~~~l~~~~~~L~~~~~~L~~~ 76 (79)
T d1nlwa_ 42 LTKAKLHIKKLEDSDRKAVHQIDQLQREQRHLKRQ 76 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66777788888888888877776666555444433
No 7
>d1k1fa_ a.147.1.1 (A:) Bcr-Abl oncoprotein oligomerization domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.33 E-value=2.3e+02 Score=21.31 Aligned_cols=25 Identities=36% Similarity=0.593 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHH
Q 007664 515 RAVEAEMETLRSKVISLEDEVEKER 539 (594)
Q Consensus 515 e~~EaEa~~L~~KV~sLE~EIekER 539 (594)
.+++.|++.-+..|.-||.++-+||
T Consensus 29 ~diE~eLerCk~~irrLeqel~~Er 53 (67)
T d1k1fa_ 29 GDIEQELERAKASIRRLEQEVNQER 53 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3566777777777777777777776
No 8
>d1seta1 a.2.7.1 (A:1-110) Seryl-tRNA synthetase (SerRS) {Thermus thermophilus, strain hb27 [TaxId: 274]}
Probab=7.12 E-value=4.8e+02 Score=19.92 Aligned_cols=57 Identities=19% Similarity=0.228 Sum_probs=31.3
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhcHHHHHHhHHHHHHHhhhh
Q 007664 498 EEVKSAKSKKEAAESRLRAVEAEMETLRSKVISLEDEVEKERALSEENIANFQKSKDELSKVK 560 (594)
Q Consensus 498 eeL~a~~a~kkelEsqLe~~EaEa~~L~~KV~sLE~EIekERalS~E~~aKC~~LEeeLsr~k 560 (594)
.++-.+..+++.+..++..+.++-..++..|..+-.+= ..++..+.+.|-+++...+
T Consensus 28 d~i~~ld~~rr~l~~~~e~l~~~rN~~sk~i~k~~~~~------~~~l~~~~k~lk~~i~~le 84 (110)
T d1seta1 28 EALLALDREVQELKKRLQEVQTERNQVAKRVPKAPPEE------KEALIARGKALGEEAKRLE 84 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCHHH------HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc------hHHHHHHHHHHHHHHHHHH
Confidence 34444556666777777777777777776665443210 1234445555555555443
No 9
>d1r5qa_ a.186.1.1 (A:) Circadian clock protein KaiA, C-terminal domain {Cyanobacterium (Nostoc sp. PCC 7120) [TaxId: 103690]}
Probab=6.20 E-value=42 Score=27.30 Aligned_cols=8 Identities=38% Similarity=1.028 Sum_probs=0.0
Q ss_pred ccccchhH
Q 007664 345 DINLMDDF 352 (594)
Q Consensus 345 di~LMDDF 352 (594)
+|+|||+|
T Consensus 54 HmeLmDeF 61 (98)
T d1r5qa_ 54 HMELIDEF 61 (98)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
No 10
>d1xkpc1 d.198.1.1 (C:2-127) Chaperone protein YscB {Yersinia pestis [TaxId: 632]}
Probab=5.64 E-value=1e+02 Score=25.99 Aligned_cols=14 Identities=29% Similarity=0.387 Sum_probs=0.0
Q ss_pred HHHHHHHH-HHHhhH
Q 007664 131 ALKECVRQ-LRQARE 144 (594)
Q Consensus 131 ALKeCmrQ-Lr~~rE 144 (594)
+||-||+| ++-+|.
T Consensus 63 ~LK~lmQq~l~w~R~ 77 (126)
T d1xkpc1 63 LLRSLMQQALAWAKR 77 (126)
T ss_dssp HHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHhc
Done!