BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007665
(594 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6CGU8|MCH1_YARLI Probable transporter MCH1 OS=Yarrowia lipolytica (strain CLIB 122 /
E 150) GN=MCH1 PE=3 SV=1
Length = 486
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 112/240 (46%), Gaps = 26/240 (10%)
Query: 312 SQTLQTENKKQEPDQTPCCGNIFKPPKRGEDYGILQALLSIDMLILFLATFCGLGCSLTA 371
++++ +E +K+ T C N P G + L+ + LFL F +G
Sbjct: 236 AESMASELRKKAEASTDC--NCDGP---GHEGATLKEFFTDKTAWLFLLCFVFIGGPFEM 290
Query: 372 I-DNLGQIGESL---GYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMA 427
+N+G I +++ + +T VSL + ++ R+ GF SE ++ V RP++++
Sbjct: 291 FQNNMGAILDTVTVENADSPSFSTHVSLFATFSTVSRLVVGFSSEA--MESHVSRPVLLS 348
Query: 428 ISLILSAV------GDVLIAFPKPGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYST 481
+ +++A + F V +++ GFSYG+ TL+ I+++++G+ T
Sbjct: 349 VIALVAACIHLMVPSGIFTVFDNAKYFSVVTIVNGFSYGSSFTLVPTIVTKVWGIANLGT 408
Query: 482 LFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTI 541
++ LA +GS ++ ++YD A ++ M++ C G CY L+F I
Sbjct: 409 IWGSFILALAVGSLGYG-LLFAKVYD--AASEVGVGSMSQ------VCSGVHCYGLTFVI 459
>sp|Q96TW9|MCH1_HANAN Probable transporter MCH1 OS=Hansenula anomala GN=MCH1 PE=3 SV=1
Length = 489
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 92/198 (46%), Gaps = 12/198 (6%)
Query: 319 NKKQEPDQTPCCGNIFKPPKRGEDY------GILQALLSIDMLILFLATFCGLGCSLTAI 372
K ++ + TP + + + +D L+ + I +L + +G S I
Sbjct: 223 RKHEDGENTPLLTDPNQEHENNDDLVPNHKSKFLKFIKDISTYVLLFSLLLSIGPSEMYI 282
Query: 373 DNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLIL 432
N+G + +++ P I+ V++ ++++ R+ G +S+ ++ Y++ R ++ ++L
Sbjct: 283 TNMGSLVKAIT-PNSLISDQVAIHAVFSTLSRLSLGALSDFLVTNYQISRSWLLLSIIVL 341
Query: 433 SAVGDVLIA---FPKPGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLA 489
+ IA F K Y+ S L GFSYG TL +I ++G + + + + +A
Sbjct: 342 GFFTQIFIATSTFVK-DQYYIISALSGFSYGGLFTLYPTVIFSIWGPEIFGSAWGSFMIA 400
Query: 490 SPLGSYVLNVIVVGRLYD 507
+GS +V G +YD
Sbjct: 401 PAIGSTTFG-MVFGLVYD 417
>sp|Q03795|YM30_YEAST Uncharacterized membrane protein YMR155W OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=YMR155W PE=1
SV=1
Length = 547
Score = 42.7 bits (99), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 78/160 (48%), Gaps = 8/160 (5%)
Query: 33 LIMAGAGATYLFGTYSKEIKSTLGYDQTTLNLLSTCKDLGANV-GVLSGLLAEVTPPWLV 91
++ GAG YLF Y+ ++ S + + LS +G+++ G+L+G++ + +P L
Sbjct: 27 VVALGAGTPYLFSFYAPQLLSKCHIPVSASSKLSFSLTIGSSLMGILAGIVVDRSPK-LS 85
Query: 92 LLVGSAMNFGGYFMIWLAVMKKIAKPKVWQMCLY-ICIGANSQNFANTGSLVTCVK-NFP 149
L+GS F Y ++ L + + + + L I G+ S +A+ V C NFP
Sbjct: 86 CLIGSMCVFIAYLILNLCYKHEWSSTFLISLSLVLIGYGSVSGFYAS----VKCANTNFP 141
Query: 150 ESRGMMLGLMKGFVGLSGAVFTQIYLAIYGNDAKSMILLI 189
+ RG GLSG VF+ + ++G + + + + +
Sbjct: 142 QHRGTAGAFPVSLYGLSGMVFSYLCSKLFGENIEHVFIFL 181
Score = 34.3 bits (77), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 55/104 (52%), Gaps = 13/104 (12%)
Query: 393 VSLVSIWNYFGRVFAGFVSEIILLKYKVPR--PLIMA----------ISLILSAVGDVLI 440
V+L+S+ ++ GR+ +G +S+ ++ K+K R +++A IS S++ D +
Sbjct: 368 VTLLSLLSFCGRLSSGPISDFLVKKFKAQRLWNIVIASLLVFLASNKISHDFSSIEDPSL 427
Query: 441 AFPKP-GSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLF 483
K ++ V S + G+S+G I+++ FG YSTL+
Sbjct: 428 RASKSFKNISVCSAIFGYSFGVLFGTFPSIVADRFGTNGYSTLW 471
>sp|Q4WVT3|MCH1_ASPFU Probable transporter mch1 OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=mch1 PE=3
SV=1
Length = 619
Score = 40.0 bits (92), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 58/119 (48%), Gaps = 10/119 (8%)
Query: 444 KPGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVG 503
PG +V + L+G YG+ +L+ IIIS ++G++ + T + + G+ + VI
Sbjct: 505 HPGLSHVTTALIGLGYGSAFSLVPIIISVVWGVENFGTNWGIVAMVPAAGAAMWGVI--- 561
Query: 504 RLYDREAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFILVMRTRR 562
Y R Q A G + D C G +CY + + ++++ A++ +IL R R
Sbjct: 562 --YSRG--YQDATDGGNGS--PDGQCHGWRCYGF-WAVGCTLSVWVAVVAWILAWRGWR 613
>sp|Q4IM48|MCH1_GIBZE Probable transporter MCH1 OS=Gibberella zeae (strain PH-1 / ATCC
MYA-4620 / FGSC 9075 / NRRL 31084) GN=MCH1 PE=3 SV=1
Length = 572
Score = 38.1 bits (87), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 82/193 (42%), Gaps = 32/193 (16%)
Query: 372 IDNLGQIGESLGYPQ-----HTIN--TFVSLVSIWNYFGRVFAGFVSEI----------- 413
I+NLG I +L P+ H + T VS+ I N R+F G ++++
Sbjct: 348 INNLGTIIGTLTPPEMEGWSHRTSAATHVSIFGITNTASRIFIGTLTDLLAPYPHTQHVQ 407
Query: 414 -------ILLKYKVPRPLIMAISLILSAVGDVLIAF----PKPGSVYVASLLVGFSYGAQ 462
+ ++ + R MA + ++G +++A ++ S LVG YGA
Sbjct: 408 GPSTRSAVSSRFSISRVAFMAFFASMLSIGLLILASGLVQNHAERFWLVSGLVGAGYGAI 467
Query: 463 LTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGMTRA 522
+L ++++ ++G++ ++T + + GS ++ + + +G R
Sbjct: 468 FSLTPLMVTIIWGVENFATNYGLIGMLPAAGSTFWGLVYSATYQNGANKSKAGPEGSDR- 526
Query: 523 MVKDLTCIGRQCY 535
DL C G QCY
Sbjct: 527 --DDLFCYGEQCY 537
>sp|Q9P3K8|MCH1_NEUCR Probable transporter MCH1 OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=mch-1
PE=3 SV=1
Length = 598
Score = 37.7 bits (86), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 449 YVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDR 508
+VAS LVG YGA +L III+ ++G++ ++T + + LG+ +V +Y +
Sbjct: 481 WVASGLVGAGYGAVFSLTPIIITVIWGVENFATNWGIVAMFPALGATFWG-LVYSAVY-Q 538
Query: 509 EAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILA 543
+++ A G + +D C G +CY +F +A
Sbjct: 539 SGVEKAASNG--QGGEEDQFCYGSECYASAFWAMA 571
>sp|Q8RAH7|MNMA1_THETN tRNA-specific 2-thiouridylase MnmA 1 OS=Thermoanaerobacter
tengcongensis (strain DSM 15242 / JCM 11007 / NBRC
100824 / MB4) GN=mnmA1 PE=3 SV=1
Length = 364
Score = 36.6 bits (83), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 10/86 (11%)
Query: 367 CSLTAIDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIM 426
CSL AI + ++ E LG P +T+N +S V ++ ++ F+ E LK + P P +
Sbjct: 54 CSLKAIHDAKKVAEILGIPHYTVN--LSEV----FYDKIVKYFIDE--YLKGRTPNPCVF 105
Query: 427 AISLILSAVGDVLIAFPKPGSVYVAS 452
I GD+L + G+ Y+A+
Sbjct: 106 CNRFI--KFGDLLEKAHELGAYYIAT 129
>sp|P37662|YHJX_ECOLI Inner membrane protein YhjX OS=Escherichia coli (strain K12)
GN=yhjX PE=1 SV=1
Length = 402
Score = 36.2 bits (82), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 8/87 (9%)
Query: 393 VSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAFPKPGSV--YV 450
V+++SI N GR+ G +S+ K+ R ++ I ++S VG + F +V +
Sbjct: 256 VTVISIANLSGRLVLGILSD------KIARIRVITIGQVISLVGMAALLFAPLNAVTFFA 309
Query: 451 ASLLVGFSYGAQLTLLFIIISELFGLK 477
A V F++G +T+ ++SE FGL
Sbjct: 310 AIACVAFNFGGTITVFPSLVSEFFGLN 336
>sp|Q6BN11|MCH1_DEBHA Probable transporter MCH1 OS=Debaryomyces hansenii (strain ATCC
36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=MCH1 PE=3 SV=2
Length = 486
Score = 35.8 bits (81), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 76/168 (45%), Gaps = 13/168 (7%)
Query: 15 SFLLQVLRGRWFMMFASFLIMAGAGATYLFGTYSKEIKSTLGYDQTTLNLLSTCKDLGAN 74
SF + + + F S +G+ LF +S + G + +N +++ +G
Sbjct: 20 SFHVSIANLKKISFFISLFSCLTSGSIMLFSLFSSSLHELYGINYLHINFIASLSAIGMY 79
Query: 75 VGV-LSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIAKPKVWQMCLY---IC--- 127
+ + + G LA+ P L+ L+ YF + V+K + V ++ LY IC
Sbjct: 80 LCLPVLGYLADCYGPSLLSLISIWFFVPSYF-VNSQVIKSLEYNNVMKIHLYAFGICFFF 138
Query: 128 --IGANSQNFANTGSLVTCVKNFPESRGMMLGLMKGFVGLSGAVFTQI 173
+ +S F+ SL+TC K +PE +G+ + L GLS + +Q+
Sbjct: 139 IGLATSSLYFS---SLLTCAKIYPEHKGLAISLPVTCYGLSTLLGSQL 183
>sp|Q7RTY0|MOT13_HUMAN Monocarboxylate transporter 13 OS=Homo sapiens GN=SLC16A13 PE=2
SV=1
Length = 426
Score = 35.0 bits (79), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 67/160 (41%), Gaps = 18/160 (11%)
Query: 329 CCGNIFKPPKRGEDYGILQALLSIDMLILFLATFCGLGCSLTAID--------NLGQIGE 380
CG + +PP ED + + L L F +LT I+ +L +
Sbjct: 184 ACGALLRPPSLAEDPAVGGPRAQLTSL-LHHGPFLRYTVALTLINTGYFIPYLHLVAHLQ 242
Query: 381 SLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLI 440
L + +S+V+I + GRV +G++ + VP P+ + L + G L
Sbjct: 243 DLDWDPLPAAFLLSVVAISDLVGRVVSGWLGD------AVPGPVTRLLMLWTTLTGVSLA 296
Query: 441 AFP---KPGSVYVASLLVGFSYGAQLTLLFIIISELFGLK 477
FP P ++ ++ GF+ GA L F ++ EL G +
Sbjct: 297 LFPVAQAPTALVALAVAYGFTSGALAPLAFSVLPELIGTR 336
>sp|Q59MJ2|MCH1_CANAL Probable transporter MCH1 OS=Candida albicans (strain SC5314 / ATCC
MYA-2876) GN=MCH1 PE=3 SV=1
Length = 436
Score = 33.9 bits (76), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 57/137 (41%), Gaps = 3/137 (2%)
Query: 38 AGATYLFGTYSKEIKSTLGYDQTTLNLLSTCKDLGANVGV-LSGLLAEVTPPWLVLLVGS 96
AG+ LF Y+ LG +N++S+ LG + + G LA+ P L+ L
Sbjct: 40 AGSILLFTLYTSSFHEVLGLSYLQINMISSLSALGMYFCLPVLGYLADSYGPALLSLFSI 99
Query: 97 AMNFGGYFMIWLAVMKKIAKPKVWQMCLYICIGANSQNFANTGSLVTCVKNFPESRGMML 156
YF+ + + V C+ C + + SL+TC + P+ +G+ +
Sbjct: 100 WFFCPSYFVN--SYLVSTQSGSVIGFCVCFCFIGLATSSLYFSSLITCARICPDHKGLAI 157
Query: 157 GLMKGFVGLSGAVFTQI 173
L GLS + QI
Sbjct: 158 SLPITCYGLSALLGAQI 174
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.140 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 204,218,772
Number of Sequences: 539616
Number of extensions: 8124397
Number of successful extensions: 24984
Number of sequences better than 100.0: 32
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 24941
Number of HSP's gapped (non-prelim): 58
length of query: 594
length of database: 191,569,459
effective HSP length: 123
effective length of query: 471
effective length of database: 125,196,691
effective search space: 58967641461
effective search space used: 58967641461
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 64 (29.3 bits)