Query 007665
Match_columns 594
No_of_seqs 208 out of 2047
Neff 9.8
Searched_HMMs 46136
Date Thu Mar 28 13:41:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007665.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007665hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PTZ00207 hypothetical protein; 100.0 3.8E-49 8.2E-54 416.9 41.8 510 21-573 23-568 (591)
2 TIGR00892 2A0113 monocarboxyla 100.0 1.4E-32 3E-37 291.2 30.2 401 22-555 15-419 (455)
3 KOG2504 Monocarboxylate transp 100.0 2.4E-33 5.2E-38 295.0 23.8 426 22-557 42-476 (509)
4 COG2271 UhpC Sugar phosphate p 100.0 5.1E-32 1.1E-36 265.3 28.9 407 21-562 24-439 (448)
5 PRK09556 uhpT sugar phosphate 100.0 1.9E-31 4.1E-36 284.1 33.7 415 24-557 27-449 (467)
6 TIGR00890 2A0111 Oxalate/Forma 100.0 4.4E-32 9.5E-37 280.8 27.8 370 24-550 2-375 (377)
7 PRK11663 regulatory protein Uh 100.0 6E-31 1.3E-35 277.5 34.7 404 23-561 20-428 (434)
8 PRK09705 cynX putative cyanate 100.0 5.3E-31 1.2E-35 274.2 31.5 361 40-562 24-386 (393)
9 PRK11273 glpT sn-glycerol-3-ph 100.0 9.8E-30 2.1E-34 269.7 35.5 415 14-560 17-438 (452)
10 PRK11551 putative 3-hydroxyphe 100.0 1.3E-29 2.9E-34 265.5 34.4 383 21-557 10-396 (406)
11 PRK14995 methyl viologen resis 100.0 1.8E-29 3.9E-34 270.5 35.0 400 23-509 3-414 (495)
12 PRK03545 putative arabinose tr 100.0 3.2E-29 6.9E-34 261.0 33.9 352 40-557 24-380 (390)
13 TIGR02332 HpaX 4-hydroxyphenyl 100.0 6.3E-30 1.4E-34 267.6 25.6 401 22-546 4-410 (412)
14 PLN00028 nitrate transmembrane 100.0 4.1E-29 8.9E-34 266.0 30.5 379 40-558 51-434 (476)
15 COG2814 AraJ Arabinose efflux 100.0 2.5E-28 5.5E-33 243.2 33.2 375 23-561 10-390 (394)
16 PRK12307 putative sialic acid 100.0 1.3E-28 2.8E-33 259.6 30.6 358 22-508 14-383 (426)
17 TIGR00903 2A0129 major facilit 100.0 1.7E-28 3.6E-33 251.8 30.4 354 40-554 6-362 (368)
18 TIGR01299 synapt_SV2 synaptic 100.0 8.8E-29 1.9E-33 270.2 29.8 150 22-178 163-315 (742)
19 PRK03699 putative transporter; 100.0 6.8E-28 1.5E-32 251.2 33.9 377 23-562 4-385 (394)
20 PRK10406 alpha-ketoglutarate t 100.0 4.7E-28 1E-32 255.4 32.5 388 23-557 19-424 (432)
21 PRK15034 nitrate/nitrite trans 100.0 8.5E-28 1.9E-32 248.2 33.0 386 25-561 33-458 (462)
22 TIGR00893 2A0114 d-galactonate 100.0 2.8E-28 6.1E-33 253.8 29.3 384 40-555 9-397 (399)
23 TIGR00712 glpT glycerol-3-phos 100.0 8.3E-28 1.8E-32 254.0 33.0 409 21-561 22-437 (438)
24 PRK10642 proline/glycine betai 100.0 6.3E-28 1.4E-32 258.3 32.3 394 27-562 17-434 (490)
25 TIGR00887 2A0109 phosphate:H+ 100.0 9E-28 2E-32 258.1 30.6 441 23-567 13-498 (502)
26 PRK10213 nepI ribonucleoside t 100.0 6.2E-27 1.3E-31 243.5 33.1 345 23-508 17-366 (394)
27 PRK03893 putative sialic acid 100.0 6.9E-27 1.5E-31 251.6 34.1 393 23-508 17-428 (496)
28 TIGR00711 efflux_EmrB drug res 100.0 2.9E-27 6.4E-32 253.7 31.1 383 40-509 17-411 (485)
29 COG2223 NarK Nitrate/nitrite t 100.0 1.9E-27 4.1E-32 233.9 26.6 383 23-561 11-405 (417)
30 PRK10504 putative transporter; 100.0 1.6E-26 3.5E-31 246.9 35.8 383 40-509 25-416 (471)
31 TIGR00891 2A0112 putative sial 100.0 1.2E-27 2.6E-32 250.3 26.5 376 21-508 7-390 (405)
32 TIGR00879 SP MFS transporter, 100.0 1.3E-28 2.8E-33 263.3 19.5 405 40-562 43-475 (481)
33 PRK05122 major facilitator sup 100.0 1.2E-26 2.7E-31 242.4 32.8 350 46-558 37-390 (399)
34 PRK10077 xylE D-xylose transpo 100.0 1.1E-26 2.3E-31 248.9 32.0 433 25-568 11-468 (479)
35 PRK15075 citrate-proton sympor 100.0 3.9E-26 8.4E-31 241.0 34.1 358 23-508 12-394 (434)
36 PRK10133 L-fucose transporter; 100.0 3.6E-26 7.8E-31 240.5 33.6 377 23-508 23-407 (438)
37 TIGR00894 2A0114euk Na(+)-depe 100.0 9.7E-28 2.1E-32 255.8 20.6 405 20-556 13-449 (465)
38 PRK03633 putative MFS family t 100.0 2.6E-26 5.5E-31 238.3 29.6 343 40-550 21-365 (381)
39 PRK09952 shikimate transporter 100.0 8.9E-26 1.9E-30 238.2 33.8 384 23-556 19-432 (438)
40 TIGR00881 2A0104 phosphoglycer 100.0 4.3E-27 9.3E-32 243.6 23.3 356 40-508 10-372 (379)
41 PRK10091 MFS transport protein 100.0 9E-26 2E-30 234.2 32.3 353 41-558 19-377 (382)
42 PRK12382 putative transporter; 100.0 7.6E-26 1.6E-30 235.9 30.3 341 50-556 41-388 (392)
43 TIGR00897 2A0118 polyol permea 100.0 1.7E-25 3.7E-30 233.7 32.9 358 47-557 35-401 (402)
44 PRK15402 multidrug efflux syst 99.9 1.5E-25 3.2E-30 234.7 31.5 353 21-508 8-370 (406)
45 TIGR00896 CynX cyanate transpo 99.9 5.4E-26 1.2E-30 233.6 25.7 331 41-508 16-348 (355)
46 PRK10489 enterobactin exporter 99.9 7.4E-26 1.6E-30 237.9 26.8 372 43-568 35-410 (417)
47 TIGR00895 2A0115 benzoate tran 99.9 6.1E-26 1.3E-30 236.7 24.2 377 22-505 13-397 (398)
48 TIGR00900 2A0121 H+ Antiporter 99.9 1.3E-25 2.8E-30 231.3 24.9 340 44-508 18-363 (365)
49 PF06813 Nodulin-like: Nodulin 99.9 1.7E-25 3.7E-30 211.8 23.4 245 24-268 1-249 (250)
50 TIGR00710 efflux_Bcr_CflA drug 99.9 5.9E-25 1.3E-29 228.4 29.5 330 40-505 20-358 (385)
51 TIGR00898 2A0119 cation transp 99.9 9.3E-26 2E-30 243.3 23.5 387 42-563 106-500 (505)
52 TIGR00885 fucP L-fucose:H+ sym 99.9 1.8E-24 4E-29 225.5 32.4 363 35-508 12-381 (410)
53 PRK11043 putative transporter; 99.9 1.9E-24 4.1E-29 226.1 32.3 347 25-508 6-357 (401)
54 PRK11646 multidrug resistance 99.9 2.9E-24 6.4E-29 223.9 32.0 343 25-508 13-359 (400)
55 PRK09874 drug efflux system pr 99.9 5.2E-24 1.1E-28 223.3 34.1 354 43-557 32-398 (408)
56 TIGR00899 2A0120 sugar efflux 99.9 5.1E-24 1.1E-28 220.6 30.5 347 46-555 19-372 (375)
57 cd06174 MFS The Major Facilita 99.9 3.1E-24 6.8E-29 219.5 28.4 333 40-555 14-350 (352)
58 COG2807 CynX Cyanate permease 99.9 9.8E-24 2.1E-28 203.0 28.2 372 24-556 10-384 (395)
59 PRK15403 multidrug efflux syst 99.9 1E-23 2.2E-28 220.7 29.8 356 22-508 11-373 (413)
60 TIGR00883 2A0106 metabolite-pr 99.9 9.1E-24 2E-28 219.9 28.2 343 40-508 8-375 (394)
61 PRK10473 multidrug efflux syst 99.9 3.2E-23 6.9E-28 216.1 31.6 327 41-508 19-349 (392)
62 KOG0569 Permease of the major 99.9 2.8E-23 6.1E-28 213.5 29.4 404 49-575 43-472 (485)
63 PRK10054 putative transporter; 99.9 1.6E-23 3.4E-28 218.1 28.1 347 42-551 25-378 (395)
64 TIGR00902 2A0127 phenyl propri 99.9 5.3E-23 1.1E-27 213.4 31.7 326 44-508 23-355 (382)
65 TIGR00886 2A0108 nitrite extru 99.9 1.3E-23 2.8E-28 216.9 26.3 341 39-493 15-365 (366)
66 PF07690 MFS_1: Major Facilita 99.9 4.1E-25 8.9E-30 226.5 14.9 331 41-499 12-352 (352)
67 KOG2532 Permease of the major 99.9 1.3E-24 2.9E-29 226.1 18.4 373 52-556 65-446 (466)
68 PRK11195 lysophospholipid tran 99.9 5.8E-23 1.3E-27 213.6 30.6 353 45-557 23-380 (393)
69 PRK09528 lacY galactoside perm 99.9 2.8E-23 6E-28 218.5 28.0 367 43-557 29-403 (420)
70 PRK11102 bicyclomycin/multidru 99.9 4.4E-23 9.6E-28 213.8 28.1 325 42-500 8-341 (377)
71 PRK11010 ampG muropeptide tran 99.9 1.6E-22 3.5E-27 215.8 32.7 362 41-557 28-403 (491)
72 PRK11652 emrD multidrug resist 99.9 3.4E-22 7.3E-27 208.5 33.3 332 40-508 23-360 (394)
73 PRK15011 sugar efflux transpor 99.9 7.6E-22 1.6E-26 205.6 33.8 367 23-556 16-390 (393)
74 PF06609 TRI12: Fungal trichot 99.9 9E-22 1.9E-26 207.5 32.9 440 43-564 62-561 (599)
75 TIGR00889 2A0110 nucleoside tr 99.9 3.7E-22 8.1E-27 209.0 29.9 193 345-562 201-407 (418)
76 COG0738 FucP Fucose permease [ 99.9 1.9E-21 4E-26 190.3 32.3 359 35-508 22-384 (422)
77 PRK10207 dipeptide/tripeptide 99.9 1.4E-20 3E-25 200.0 37.7 418 40-560 29-479 (489)
78 PRK11128 putative 3-phenylprop 99.9 3.8E-21 8.2E-26 199.6 31.6 326 44-508 23-355 (382)
79 KOG0252 Inorganic phosphate tr 99.9 1.4E-22 3E-27 199.9 19.3 442 22-568 37-508 (538)
80 KOG2533 Permease of the major 99.9 4.6E-22 1E-26 207.5 23.7 339 51-496 72-419 (495)
81 PRK06814 acylglycerophosphoeth 99.9 2.2E-21 4.7E-26 229.1 31.9 354 50-554 41-419 (1140)
82 TIGR00882 2A0105 oligosacchari 99.9 1E-20 2.2E-25 197.5 33.2 361 47-555 25-393 (396)
83 PRK08633 2-acyl-glycerophospho 99.9 4.5E-21 9.7E-26 227.2 33.7 346 44-505 29-381 (1146)
84 KOG1330 Sugar transporter/spin 99.9 3.3E-23 7.2E-28 205.4 11.2 369 23-509 30-413 (493)
85 PRK11902 ampG muropeptide tran 99.9 3.9E-20 8.6E-25 193.3 33.2 362 36-556 9-389 (402)
86 TIGR00901 2A0125 AmpG-related 99.9 3.2E-21 6.9E-26 198.3 23.9 327 43-491 6-355 (356)
87 KOG0254 Predicted transporter 99.9 6.4E-21 1.4E-25 205.1 25.0 388 60-575 89-501 (513)
88 PRK09584 tppB putative tripept 99.9 1.2E-18 2.5E-23 186.4 35.6 146 46-197 43-193 (500)
89 TIGR00924 yjdL_sub1_fam amino 99.9 8.3E-19 1.8E-23 186.4 34.1 406 49-560 35-471 (475)
90 TIGR00792 gph sugar (Glycoside 99.9 7.1E-20 1.5E-24 193.8 25.6 342 46-508 21-380 (437)
91 KOG3764 Vesicular amine transp 99.9 1.5E-20 3.3E-25 182.4 17.8 343 53-558 99-455 (464)
92 KOG0253 Synaptic vesicle trans 99.9 3.7E-20 8.1E-25 177.2 20.1 422 21-564 73-526 (528)
93 TIGR00805 oat sodium-independe 99.9 1.1E-20 2.3E-25 206.4 17.9 296 41-417 49-397 (633)
94 TIGR02718 sider_RhtX_FptX side 99.8 1.2E-18 2.6E-23 181.4 30.6 365 32-552 7-386 (390)
95 PF00083 Sugar_tr: Sugar (and 99.8 1.2E-24 2.5E-29 231.3 -15.6 383 61-571 47-450 (451)
96 TIGR00806 rfc RFC reduced fola 99.8 4.7E-19 1E-23 179.7 24.7 136 33-176 34-172 (511)
97 KOG4686 Predicted sugar transp 99.8 7.9E-20 1.7E-24 168.8 14.8 359 33-508 49-414 (459)
98 PF05977 MFS_3: Transmembrane 99.8 2.6E-18 5.6E-23 182.3 27.3 360 45-556 30-393 (524)
99 KOG0255 Synaptic vesicle trans 99.8 1.7E-17 3.6E-22 179.6 24.6 385 52-565 110-500 (521)
100 KOG2563 Permease of the major 99.8 1.3E-17 2.7E-22 165.5 20.3 409 19-563 38-456 (480)
101 KOG2615 Permease of the major 99.8 5.8E-18 1.3E-22 163.6 14.8 336 58-509 66-415 (451)
102 PF11700 ATG22: Vacuole efflux 99.8 1.4E-15 3.1E-20 159.8 33.7 188 344-558 273-469 (477)
103 PRK10429 melibiose:sodium symp 99.7 2.7E-16 5.9E-21 167.7 25.5 344 47-508 29-393 (473)
104 TIGR00788 fbt folate/biopterin 99.7 4.8E-16 1E-20 164.9 26.8 357 33-508 33-413 (468)
105 PRK09669 putative symporter Ya 99.7 2E-16 4.4E-21 167.5 23.2 339 47-508 32-388 (444)
106 PRK09848 glucuronide transport 99.7 4.7E-16 1E-20 165.0 26.0 158 344-508 220-388 (448)
107 PF03825 Nuc_H_symport: Nucleo 99.7 7.2E-15 1.6E-19 151.6 32.4 189 345-558 200-396 (400)
108 TIGR01272 gluP glucose/galacto 99.7 7.4E-16 1.6E-20 154.3 23.6 277 117-508 8-290 (310)
109 TIGR01301 GPH_sucrose GPH fami 99.7 8.1E-15 1.7E-19 153.1 31.2 388 48-562 27-476 (477)
110 PF01306 LacY_symp: LacY proto 99.7 2.1E-15 4.4E-20 152.7 24.2 188 344-562 212-405 (412)
111 PRK15462 dipeptide/tripeptide 99.7 6.1E-14 1.3E-18 147.1 34.6 156 40-201 24-185 (493)
112 PF13347 MFS_2: MFS/sugar tran 99.7 2.1E-15 4.6E-20 158.9 19.9 341 46-508 23-384 (428)
113 COG2270 Permeases of the major 99.6 7.4E-15 1.6E-19 145.3 15.5 185 344-557 244-429 (438)
114 PRK11462 putative transporter; 99.6 2.4E-13 5.3E-18 144.1 28.1 124 47-171 32-163 (460)
115 PF03209 PUCC: PUCC protein; 99.6 1.9E-12 4.1E-17 128.9 29.6 373 48-556 3-397 (403)
116 COG2211 MelB Na+/melibiose sym 99.5 1E-12 2.3E-17 134.4 23.2 386 47-561 35-440 (467)
117 PF03137 OATP: Organic Anion T 99.4 3E-14 6.4E-19 152.0 -0.2 385 45-510 23-516 (539)
118 COG3104 PTR2 Dipeptide/tripept 99.4 2E-10 4.4E-15 116.7 26.9 146 55-205 56-206 (498)
119 COG2271 UhpC Sugar phosphate p 99.4 2.8E-12 6.1E-17 127.0 11.2 176 354-560 31-209 (448)
120 COG2814 AraJ Arabinose efflux 99.3 1.3E-11 2.9E-16 123.8 14.4 175 353-558 14-189 (394)
121 TIGR00712 glpT glycerol-3-phos 99.3 6.2E-12 1.3E-16 133.0 11.6 180 350-560 25-209 (438)
122 PRK11663 regulatory protein Uh 99.3 4.5E-12 9.8E-17 133.9 10.6 175 353-558 24-199 (434)
123 TIGR00710 efflux_Bcr_CflA drug 99.3 1.6E-11 3.4E-16 127.5 13.8 161 369-560 22-183 (385)
124 PRK10504 putative transporter; 99.3 1.3E-11 2.9E-16 131.9 12.5 177 352-559 10-187 (471)
125 PF07690 MFS_1: Major Facilita 99.3 6.8E-12 1.5E-16 128.4 9.7 156 372-558 16-173 (352)
126 KOG2325 Predicted transporter/ 99.3 1.7E-10 3.6E-15 118.6 19.4 153 19-174 27-185 (488)
127 TIGR02332 HpaX 4-hydroxyphenyl 99.3 2.5E-11 5.3E-16 127.3 13.7 180 357-561 13-193 (412)
128 PRK10091 MFS transport protein 99.3 2.5E-11 5.4E-16 126.1 13.2 175 353-558 4-179 (382)
129 TIGR00900 2A0121 H+ Antiporter 99.3 1.4E-11 2.9E-16 126.8 11.1 156 371-557 18-179 (365)
130 PRK10054 putative transporter; 99.3 1.9E-11 4.2E-16 127.3 12.1 176 353-560 8-185 (395)
131 PRK10213 nepI ribonucleoside t 99.3 3.1E-11 6.6E-16 125.8 13.6 152 370-552 38-190 (394)
132 TIGR01299 synapt_SV2 synaptic 99.3 4E-11 8.6E-16 132.1 14.7 168 374-560 189-357 (742)
133 TIGR00893 2A0114 d-galactonate 99.3 7.6E-12 1.7E-16 130.0 8.8 157 373-560 15-172 (399)
134 PRK03545 putative arabinose tr 99.3 3.7E-11 8E-16 125.2 13.8 153 374-557 31-184 (390)
135 TIGR00895 2A0115 benzoate tran 99.3 2.3E-11 5.1E-16 126.6 12.1 157 372-559 37-194 (398)
136 TIGR00924 yjdL_sub1_fam amino 99.3 2.5E-11 5.5E-16 129.2 12.3 172 353-555 11-190 (475)
137 TIGR00881 2A0104 phosphoglycer 99.3 6.7E-12 1.5E-16 129.7 6.7 158 371-559 14-173 (379)
138 PRK10473 multidrug efflux syst 99.2 5.6E-11 1.2E-15 123.9 13.4 160 370-560 21-181 (392)
139 TIGR00891 2A0112 putative sial 99.2 1.1E-10 2.3E-15 122.1 14.7 165 356-549 16-181 (405)
140 TIGR00711 efflux_EmrB drug res 99.2 3.6E-11 7.8E-16 129.1 10.6 159 371-560 21-180 (485)
141 PRK15403 multidrug efflux syst 99.2 1.5E-10 3.3E-15 121.3 13.7 161 369-560 33-194 (413)
142 PRK14995 methyl viologen resis 99.2 1E-10 2.2E-15 125.7 12.6 171 358-559 12-184 (495)
143 PRK11273 glpT sn-glycerol-3-ph 99.2 1E-10 2.2E-15 124.3 12.5 157 373-560 50-211 (452)
144 PRK09874 drug efflux system pr 99.2 2.5E-10 5.5E-15 119.5 14.9 175 353-559 15-195 (408)
145 PRK09584 tppB putative tripept 99.2 1.5E-10 3.3E-15 124.0 13.3 180 346-556 14-200 (500)
146 PRK11102 bicyclomycin/multidru 99.2 1.2E-10 2.6E-15 120.6 11.9 158 372-560 11-169 (377)
147 PRK15462 dipeptide/tripeptide 99.2 1.6E-10 3.4E-15 121.6 12.7 172 353-555 10-187 (493)
148 TIGR00903 2A0129 major facilit 99.2 7.6E-11 1.6E-15 121.2 10.1 156 373-560 12-168 (368)
149 PRK11551 putative 3-hydroxyphe 99.2 1.5E-10 3.3E-15 121.2 12.6 155 374-559 37-192 (406)
150 PRK11652 emrD multidrug resist 99.2 3.4E-10 7.3E-15 118.1 14.7 170 359-559 15-185 (394)
151 PRK03699 putative transporter; 99.2 1.5E-10 3.2E-15 120.7 11.9 172 352-553 7-179 (394)
152 PRK15402 multidrug efflux syst 99.2 2.9E-10 6.4E-15 119.1 14.1 161 369-560 30-191 (406)
153 PRK09556 uhpT sugar phosphate 99.2 2.2E-10 4.7E-15 122.3 13.2 156 373-556 50-211 (467)
154 PRK11195 lysophospholipid tran 99.2 1.4E-10 3.1E-15 120.7 11.4 149 351-508 2-150 (393)
155 PLN00028 nitrate transmembrane 99.2 4.9E-10 1.1E-14 119.7 15.7 163 372-557 56-219 (476)
156 PRK11646 multidrug resistance 99.2 2.5E-10 5.3E-15 119.2 12.9 170 356-557 14-185 (400)
157 PRK15011 sugar efflux transpor 99.2 1.7E-09 3.6E-14 112.8 19.1 150 44-200 235-386 (393)
158 PRK10489 enterobactin exporter 99.2 4.5E-11 9.8E-16 125.7 7.1 178 347-555 12-195 (417)
159 TIGR00890 2A0111 Oxalate/Forma 99.1 1.4E-10 3E-15 119.8 10.4 158 369-558 20-178 (377)
160 TIGR00897 2A0118 polyol permea 99.1 2.1E-10 4.7E-15 119.9 11.7 133 370-508 31-168 (402)
161 PRK10642 proline/glycine betai 99.1 4E-09 8.6E-14 113.3 21.5 136 40-179 265-403 (490)
162 TIGR00879 SP MFS transporter, 99.1 3.7E-10 7.9E-15 120.6 13.4 141 384-555 68-215 (481)
163 TIGR00886 2A0108 nitrite extru 99.1 2.3E-10 5E-15 118.0 10.9 146 354-507 3-151 (366)
164 PRK12307 putative sialic acid 99.1 3.4E-10 7.4E-15 119.3 11.6 141 372-543 38-179 (426)
165 KOG2816 Predicted transporter 99.1 6E-09 1.3E-13 108.7 20.3 122 381-509 271-393 (463)
166 cd06174 MFS The Major Facilita 99.1 5.8E-10 1.3E-14 113.8 12.6 166 360-556 7-173 (352)
167 PRK09705 cynX putative cyanate 99.1 1.1E-09 2.4E-14 114.1 14.8 148 371-549 28-176 (393)
168 PRK10207 dipeptide/tripeptide 99.1 4.9E-10 1.1E-14 119.5 12.2 170 353-553 15-190 (489)
169 PRK11043 putative transporter; 99.1 7.2E-10 1.6E-14 115.9 13.3 154 372-556 26-180 (401)
170 PRK15034 nitrate/nitrite trans 99.1 6.2E-10 1.4E-14 115.8 12.5 188 351-558 33-233 (462)
171 PRK12382 putative transporter; 99.1 7.5E-10 1.6E-14 115.4 13.3 151 351-508 14-174 (392)
172 TIGR00899 2A0120 sugar efflux 99.1 6.1E-09 1.3E-13 107.7 19.5 134 50-190 225-359 (375)
173 KOG3626 Organic anion transpor 99.1 1.2E-09 2.6E-14 116.9 14.3 290 43-417 115-459 (735)
174 PF06609 TRI12: Fungal trichot 99.1 8.8E-10 1.9E-14 117.2 12.8 179 348-559 36-219 (599)
175 PRK10077 xylE D-xylose transpo 99.1 1.3E-09 2.8E-14 116.8 14.3 154 383-560 51-217 (479)
176 PRK03893 putative sialic acid 99.1 6.2E-10 1.3E-14 119.9 11.4 160 354-544 22-182 (496)
177 PRK09528 lacY galactoside perm 99.1 5E-10 1.1E-14 117.9 10.2 177 347-557 5-191 (420)
178 KOG1330 Sugar transporter/spin 99.1 5.1E-11 1.1E-15 119.3 2.0 178 355-562 36-214 (493)
179 TIGR00880 2_A_01_02 Multidrug 99.0 5.1E-09 1.1E-13 91.3 14.1 110 74-190 13-123 (141)
180 PRK05122 major facilitator sup 99.0 1.4E-09 3.1E-14 113.6 12.1 165 352-547 15-189 (399)
181 TIGR00889 2A0110 nucleoside tr 99.0 6.8E-09 1.5E-13 108.9 17.2 161 46-209 229-407 (418)
182 TIGR00894 2A0114euk Na(+)-depe 99.0 4.9E-10 1.1E-14 119.6 8.6 148 381-558 70-220 (465)
183 PF03092 BT1: BT1 family; Int 99.0 3.2E-08 7E-13 103.8 21.7 133 44-179 9-149 (433)
184 TIGR00892 2A0113 monocarboxyla 99.0 2.3E-09 5E-14 113.9 13.1 154 371-556 38-193 (455)
185 PRK03633 putative MFS family t 99.0 2.7E-09 5.9E-14 110.7 12.8 151 351-508 5-156 (381)
186 PF01770 Folate_carrier: Reduc 99.0 4E-07 8.7E-12 92.2 27.5 131 41-179 20-154 (412)
187 TIGR00902 2A0127 phenyl propri 99.0 3E-08 6.5E-13 102.9 20.0 138 46-191 226-366 (382)
188 TIGR00880 2_A_01_02 Multidrug 99.0 1.9E-09 4.1E-14 94.0 9.2 135 392-557 3-138 (141)
189 PF05631 DUF791: Protein of un 99.0 1.2E-07 2.6E-12 93.4 22.2 86 50-143 59-145 (354)
190 TIGR00882 2A0105 oligosacchari 99.0 2.4E-09 5.3E-14 111.7 11.1 172 351-556 1-182 (396)
191 KOG3764 Vesicular amine transp 99.0 1.7E-09 3.8E-14 106.1 8.3 150 382-562 101-252 (464)
192 PTZ00207 hypothetical protein; 98.9 9.3E-09 2E-13 110.2 13.1 152 373-558 48-206 (591)
193 TIGR00883 2A0106 metabolite-pr 98.9 3.5E-08 7.7E-13 102.4 17.4 137 41-180 235-375 (394)
194 TIGR00885 fucP L-fucose:H+ sym 98.9 7.4E-09 1.6E-13 108.3 12.2 128 373-507 24-155 (410)
195 TIGR00896 CynX cyanate transpo 98.9 1.1E-08 2.4E-13 105.0 12.5 149 371-549 19-167 (355)
196 COG2223 NarK Nitrate/nitrite t 98.9 2.9E-08 6.2E-13 99.0 14.0 146 31-180 224-375 (417)
197 PRK11010 ampG muropeptide tran 98.9 2.2E-08 4.8E-13 107.3 13.2 156 369-555 29-193 (491)
198 TIGR00901 2A0125 AmpG-related 98.9 2.8E-08 6E-13 102.1 13.5 163 373-559 9-180 (356)
199 TIGR00898 2A0119 cation transp 98.8 7.7E-09 1.7E-13 111.7 9.6 147 375-555 112-262 (505)
200 PRK11902 ampG muropeptide tran 98.8 2.5E-08 5.4E-13 104.3 12.8 150 372-552 19-177 (402)
201 TIGR00887 2A0109 phosphate:H+ 98.8 2.3E-08 4.9E-13 107.8 12.8 116 384-506 53-175 (502)
202 PRK11128 putative 3-phenylprop 98.8 2.7E-07 5.8E-12 95.8 20.1 130 47-183 227-358 (382)
203 PRK06814 acylglycerophosphoeth 98.8 1.6E-08 3.4E-13 120.2 11.4 184 346-556 5-194 (1140)
204 COG3104 PTR2 Dipeptide/tripept 98.8 4.9E-08 1.1E-12 99.6 13.0 149 382-561 56-210 (498)
205 TIGR00806 rfc RFC reduced fola 98.8 4E-08 8.6E-13 100.8 12.3 157 375-561 49-207 (511)
206 PF05977 MFS_3: Transmembrane 98.8 1.8E-08 3.9E-13 107.5 10.3 177 346-553 4-186 (524)
207 PRK09952 shikimate transporter 98.8 4.5E-07 9.7E-12 95.9 21.0 131 46-179 271-405 (438)
208 TIGR01301 GPH_sucrose GPH fami 98.8 2.4E-08 5.1E-13 104.8 9.9 175 372-561 24-222 (477)
209 PRK10133 L-fucose transporter; 98.8 5.5E-08 1.2E-12 102.7 12.9 145 355-506 29-177 (438)
210 PRK10406 alpha-ketoglutarate t 98.8 5.4E-08 1.2E-12 102.8 12.7 152 375-549 45-211 (432)
211 KOG2615 Permease of the major 98.7 6.6E-08 1.4E-12 94.7 10.8 115 385-507 66-181 (451)
212 KOG3098 Uncharacterized conser 98.7 2.8E-06 6.2E-11 87.6 22.8 99 65-171 56-155 (461)
213 TIGR00805 oat sodium-independe 98.7 2E-08 4.4E-13 110.3 7.6 175 374-557 55-281 (633)
214 KOG2532 Permease of the major 98.7 4.7E-08 1E-12 102.5 9.0 150 381-560 67-219 (466)
215 TIGR01272 gluP glucose/galacto 98.7 8.8E-07 1.9E-11 88.9 17.6 120 54-182 172-292 (310)
216 PRK15075 citrate-proton sympor 98.7 2E-07 4.2E-12 98.6 13.3 128 371-505 34-176 (434)
217 KOG0255 Synaptic vesicle trans 98.7 1.4E-07 2.9E-12 102.4 11.5 146 382-562 113-259 (521)
218 KOG0254 Predicted transporter 98.6 3.1E-07 6.7E-12 99.2 12.9 140 390-560 92-232 (513)
219 PF11700 ATG22: Vacuole efflux 98.6 2.5E-06 5.4E-11 90.2 19.2 147 34-180 291-442 (477)
220 PRK08633 2-acyl-glycerophospho 98.6 1.9E-07 4.2E-12 111.3 12.1 155 347-508 4-165 (1146)
221 TIGR02718 sider_RhtX_FptX side 98.6 3E-06 6.5E-11 88.2 19.0 134 49-183 232-369 (390)
222 KOG2533 Permease of the major 98.6 1.9E-07 4.1E-12 98.3 9.8 158 380-561 74-231 (495)
223 COG2270 Permeases of the major 98.5 4.2E-06 9.2E-11 83.8 15.8 141 33-180 261-403 (438)
224 KOG2504 Monocarboxylate transp 98.5 7.1E-07 1.5E-11 94.9 10.5 153 374-558 68-222 (509)
225 TIGR00792 gph sugar (Glycoside 98.4 6.2E-06 1.3E-10 87.2 16.3 116 58-179 255-379 (437)
226 KOG0569 Permease of the major 98.4 2.4E-06 5.3E-11 88.9 11.8 137 390-556 63-204 (485)
227 PF13347 MFS_2: MFS/sugar tran 98.3 1.1E-05 2.5E-10 85.0 15.8 121 51-177 252-381 (428)
228 KOG0252 Inorganic phosphate tr 98.3 7.5E-06 1.6E-10 82.5 12.1 109 384-499 81-197 (538)
229 PF01306 LacY_symp: LacY proto 98.3 1.1E-05 2.5E-10 82.3 13.4 143 59-208 258-404 (412)
230 COG2807 CynX Cyanate permease 98.3 1.1E-05 2.3E-10 79.3 12.4 152 374-556 34-185 (395)
231 PRK09848 glucuronide transport 98.3 2.6E-05 5.7E-10 82.8 16.4 122 52-178 256-386 (448)
232 PF02487 CLN3: CLN3 protein; 98.2 0.00037 8E-09 71.0 22.1 91 75-176 75-165 (402)
233 PF06963 FPN1: Ferroportin1 (F 98.2 0.00067 1.5E-08 70.3 24.4 160 343-507 250-416 (432)
234 PF06813 Nodulin-like: Nodulin 98.2 2.2E-05 4.8E-10 75.0 12.5 132 366-506 16-155 (250)
235 KOG4686 Predicted sugar transp 98.2 5.4E-05 1.2E-09 71.5 14.5 145 25-180 267-414 (459)
236 PF03825 Nuc_H_symport: Nucleo 98.2 0.00015 3.1E-09 75.3 19.5 128 48-181 230-365 (400)
237 PRK09669 putative symporter Ya 98.2 4.2E-06 9.1E-11 88.8 8.0 164 375-557 32-204 (444)
238 KOG4332 Predicted sugar transp 98.1 4.3E-05 9.3E-10 71.4 13.0 98 51-156 63-161 (454)
239 TIGR00788 fbt folate/biopterin 98.1 3E-05 6.5E-10 82.6 13.5 175 356-560 30-211 (468)
240 KOG2325 Predicted transporter/ 98.1 1.9E-05 4E-10 81.9 11.2 191 354-562 36-234 (488)
241 COG0738 FucP Fucose permease [ 98.1 3.6E-05 7.7E-10 76.8 12.6 173 373-557 34-210 (422)
242 PRK10429 melibiose:sodium symp 98.1 6E-06 1.3E-10 88.3 7.5 164 374-556 28-200 (473)
243 PF00083 Sugar_tr: Sugar (and 98.0 6.2E-08 1.3E-12 103.0 -9.5 145 387-560 46-194 (451)
244 PF05631 DUF791: Protein of un 98.0 0.0002 4.3E-09 71.0 15.3 156 378-562 60-221 (354)
245 KOG0253 Synaptic vesicle trans 97.9 0.00013 2.7E-09 71.7 11.5 92 76-174 398-490 (528)
246 PRK11462 putative transporter; 97.9 4.6E-05 1E-09 81.0 9.4 163 375-556 32-203 (460)
247 TIGR00926 2A1704 Peptide:H+ sy 97.9 0.0063 1.4E-07 67.0 25.8 133 46-178 9-148 (654)
248 COG0477 ProP Permeases of the 97.9 0.00034 7.3E-09 69.2 14.7 124 43-171 20-149 (338)
249 COG2211 MelB Na+/melibiose sym 97.8 5.3E-05 1.1E-09 78.4 8.3 168 374-559 34-209 (467)
250 PF05978 UNC-93: Ion channel r 97.8 0.00055 1.2E-08 60.4 12.9 101 65-173 43-144 (156)
251 TIGR00769 AAA ADP/ATP carrier 97.8 0.011 2.4E-07 62.2 24.5 130 48-177 26-188 (472)
252 PF03209 PUCC: PUCC protein; 97.7 0.00041 8.8E-09 70.0 11.7 127 380-508 8-151 (403)
253 KOG0637 Sucrose transporter an 97.7 0.00049 1.1E-08 69.8 12.1 125 47-171 54-196 (498)
254 TIGR00939 2a57 Equilibrative N 97.7 0.011 2.5E-07 61.9 22.6 112 389-505 309-430 (437)
255 KOG3810 Micronutrient transpor 97.6 0.00097 2.1E-08 65.1 12.4 128 43-178 23-154 (433)
256 TIGR00926 2A1704 Peptide:H+ sy 97.6 0.00044 9.5E-09 75.9 11.0 163 370-557 5-182 (654)
257 PF06779 DUF1228: Protein of u 97.6 0.00047 1E-08 53.3 7.9 70 40-109 7-77 (85)
258 KOG2563 Permease of the major 97.5 0.0015 3.3E-08 66.3 13.2 119 382-508 75-202 (480)
259 KOG3762 Predicted transporter 97.5 0.00012 2.5E-09 75.6 5.1 182 347-560 366-550 (618)
260 KOG3762 Predicted transporter 97.4 0.0025 5.4E-08 66.1 12.8 120 52-178 398-520 (618)
261 PF03137 OATP: Organic Anion T 97.3 3.3E-05 7.2E-10 83.0 -1.1 180 374-562 25-255 (539)
262 KOG2816 Predicted transporter 97.2 0.0015 3.2E-08 68.7 9.3 134 397-565 72-207 (463)
263 KOG3574 Acetyl-CoA transporter 97.2 0.049 1.1E-06 54.3 18.5 136 33-170 38-185 (510)
264 PF12832 MFS_1_like: MFS_1 lik 97.1 0.00043 9.4E-09 53.0 3.5 49 370-418 18-66 (77)
265 PF12832 MFS_1_like: MFS_1 lik 97.1 0.0025 5.4E-08 48.8 7.3 57 43-99 18-75 (77)
266 PF03092 BT1: BT1 family; Int 97.0 0.0044 9.5E-08 65.3 10.4 157 376-559 14-177 (433)
267 PF05978 UNC-93: Ion channel r 96.8 0.0078 1.7E-07 53.1 8.7 108 385-499 35-142 (156)
268 PF13000 Acatn: Acetyl-coenzym 96.8 0.3 6.6E-06 50.8 21.0 54 455-509 415-468 (544)
269 KOG1237 H+/oligopeptide sympor 96.6 1.2 2.6E-05 48.4 25.5 105 45-149 58-182 (571)
270 KOG1479 Nucleoside transporter 96.3 0.54 1.2E-05 48.0 19.4 102 387-493 282-391 (406)
271 PRK03612 spermidine synthase; 96.2 0.054 1.2E-06 58.2 12.6 122 381-508 44-171 (521)
272 COG0477 ProP Permeases of the 96.2 0.075 1.6E-06 52.1 12.8 127 375-508 25-158 (338)
273 KOG0637 Sucrose transporter an 95.8 0.025 5.4E-07 57.8 7.1 128 372-501 52-198 (498)
274 KOG3626 Organic anion transpor 95.4 0.01 2.2E-07 64.7 2.8 176 375-562 120-348 (735)
275 PF01733 Nucleoside_tran: Nucl 94.9 0.0087 1.9E-07 59.9 0.7 99 391-495 186-298 (309)
276 PF00854 PTR2: POT family; In 94.9 0.078 1.7E-06 54.7 7.7 107 425-556 3-122 (372)
277 PF03219 TLC: TLC ATP/ADP tran 94.8 6.7 0.00014 41.8 23.8 62 48-109 43-109 (491)
278 PRK03612 spermidine synthase; 94.2 7.8 0.00017 41.9 21.2 146 51-200 41-193 (521)
279 KOG3098 Uncharacterized conser 93.7 2 4.4E-05 45.0 14.8 116 55-170 273-404 (461)
280 PF01770 Folate_carrier: Reduc 93.5 0.52 1.1E-05 48.5 10.0 158 375-562 26-187 (412)
281 PF06779 DUF1228: Protein of u 93.3 0.14 3E-06 39.8 4.2 67 373-445 13-79 (85)
282 KOG3574 Acetyl-CoA transporter 93.2 1 2.2E-05 45.2 11.0 196 354-561 33-240 (510)
283 KOG4332 Predicted sugar transp 92.8 0.4 8.7E-06 45.6 7.3 88 378-475 63-155 (454)
284 TIGR00769 AAA ADP/ATP carrier 92.4 1.6 3.4E-05 46.3 11.9 46 461-507 144-190 (472)
285 PF06963 FPN1: Ferroportin1 (F 91.8 6.7 0.00015 41.0 15.7 126 41-166 274-404 (432)
286 PF00854 PTR2: POT family; In 91.0 1.2 2.5E-05 46.0 9.3 113 90-202 2-120 (372)
287 PF02487 CLN3: CLN3 protein; 90.1 11 0.00023 39.0 15.0 115 55-174 276-391 (402)
288 KOG1479 Nucleoside transporter 83.9 10 0.00022 38.9 10.6 123 367-495 33-162 (406)
289 KOG3880 Predicted small molecu 78.8 25 0.00053 34.7 10.5 55 446-501 343-397 (409)
290 KOG3817 Uncharacterized conser 77.5 19 0.00041 35.6 9.4 51 117-170 158-208 (452)
291 PF07672 MFS_Mycoplasma: Mycop 76.2 77 0.0017 30.6 16.3 23 343-365 85-107 (267)
292 KOG1237 H+/oligopeptide sympor 75.3 8.9 0.00019 41.8 7.5 158 369-556 54-244 (571)
293 COG4262 Predicted spermidine s 74.1 64 0.0014 32.5 12.0 114 356-472 11-132 (508)
294 PF13000 Acatn: Acetyl-coenzym 67.9 15 0.00033 38.7 6.8 84 468-560 141-224 (544)
295 COG5336 Uncharacterized protei 61.8 16 0.00035 29.4 4.3 33 66-98 49-82 (116)
296 PF07672 MFS_Mycoplasma: Mycop 61.0 1.6E+02 0.0035 28.4 12.0 103 66-171 147-256 (267)
297 PF10225 DUF2215: Uncharacteri 59.4 1.7E+02 0.0037 28.1 14.3 55 117-174 32-86 (249)
298 PF02990 EMP70: Endomembrane p 57.0 61 0.0013 35.1 9.4 70 346-416 252-322 (521)
299 PF11947 DUF3464: Protein of u 55.0 32 0.00069 30.1 5.5 32 463-494 112-143 (153)
300 KOG3097 Predicted membrane pro 54.9 36 0.00079 33.9 6.4 88 51-147 51-138 (390)
301 COG3202 ATP/ADP translocase [E 51.8 3.3E+02 0.0071 29.1 29.7 84 25-111 26-114 (509)
302 TIGR00939 2a57 Equilibrative N 51.3 1E+02 0.0023 32.4 9.8 55 118-172 371-426 (437)
303 COG5336 Uncharacterized protei 47.0 12 0.00027 30.0 1.6 31 478-509 39-69 (116)
304 KOG3810 Micronutrient transpor 43.9 66 0.0014 32.5 6.4 88 67-159 279-367 (433)
305 PF07857 DUF1632: CEO family ( 41.2 3.4E+02 0.0073 26.2 11.3 18 366-383 192-209 (254)
306 PF11299 DUF3100: Protein of u 40.8 65 0.0014 30.2 5.4 90 77-170 125-222 (241)
307 PF03219 TLC: TLC ATP/ADP tran 33.3 1E+02 0.0022 33.0 6.4 42 465-507 164-205 (491)
308 PF11947 DUF3464: Protein of u 32.6 93 0.002 27.2 4.8 46 117-165 95-141 (153)
309 PF03547 Mem_trans: Membrane t 31.3 5.8E+02 0.012 26.1 11.7 248 70-365 10-258 (385)
310 COG3202 ATP/ADP translocase [E 29.4 7.3E+02 0.016 26.6 12.2 42 465-507 168-209 (509)
311 COG3256 NorB Nitric oxide redu 28.6 8.1E+02 0.018 26.8 26.8 36 241-276 506-542 (717)
312 KOG3880 Predicted small molecu 28.4 1.9E+02 0.004 28.9 6.5 57 117-173 340-397 (409)
313 TIGR02230 ATPase_gene1 F0F1-AT 26.2 2.7E+02 0.0058 22.5 6.1 29 71-99 54-83 (100)
314 COG4769 Predicted membrane pro 25.2 1.3E+02 0.0028 26.5 4.4 51 71-134 85-135 (181)
315 KOG3097 Predicted membrane pro 24.4 72 0.0016 31.9 3.1 69 395-469 66-134 (390)
316 COG2056 Predicted permease [Ge 22.5 1.7E+02 0.0036 29.6 5.1 31 534-564 189-220 (444)
317 PF06800 Sugar_transport: Suga 22.1 4.2E+02 0.0092 25.7 7.8 12 455-466 47-58 (269)
318 PRK10692 hypothetical protein; 21.5 3E+02 0.0065 21.4 5.2 17 88-104 3-19 (92)
319 KOG2601 Iron transporter [Inor 21.4 6.3E+02 0.014 26.1 8.8 12 497-508 190-201 (503)
320 PF12670 DUF3792: Protein of u 20.8 4.8E+02 0.01 21.5 11.9 57 51-107 28-86 (116)
No 1
>PTZ00207 hypothetical protein; Provisional
Probab=100.00 E-value=3.8e-49 Score=416.95 Aligned_cols=510 Identities=16% Similarity=0.241 Sum_probs=403.6
Q ss_pred HhhhHHHHHHHHHHHHhhhhhhchhhhHHHHHHHhCCCHhHHHHHHHHHhhhhhhhhhhhhhhcccCchHHHHHHHHHHH
Q 007665 21 LRGRWFMMFASFLIMAGAGATYLFGTYSKEIKSTLGYDQTTLNLLSTCKDLGANVGVLSGLLAEVTPPWLVLLVGSAMNF 100 (594)
Q Consensus 21 ~~~~w~~~~~~~l~~~~~g~~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~~~~G~l~Dr~G~r~v~~~g~~l~~ 100 (594)
..+||.+++++++++.+.|..|.++.+.|++++++|+|.++++++.+.....++++++.|++.||+|||+++++|.+++.
T Consensus 23 e~~Rw~~lva~~~~~~~~g~~y~fsv~s~~L~~~lgls~~~l~~i~svg~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~ 102 (591)
T PTZ00207 23 EPRRFALLVLGAFCSICTSFMYAFNLISGAMQARYNLTQRDLSTITTVGIAVGYFLLPYSFIYDYLGPRPIFVLSMTVFC 102 (591)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 46889999999999999999999999999999999999999999665555555677789999999999999999999999
Q ss_pred HHHHHHHHHHhhccCChhHHHHHHHHHHHhhhhhhhhhhhHhHHhhcCCCceeehhHHHHHhhhhHHHHHHHHHHHHhCC
Q 007665 101 GGYFMIWLAVMKKIAKPKVWQMCLYICIGANSQNFANTGSLVTCVKNFPESRGMMLGLMKGFVGLSGAVFTQIYLAIYGN 180 (594)
Q Consensus 101 ig~~l~~~a~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp~~rg~~~gi~~~~~glg~~i~~~l~~~l~~~ 180 (594)
+|+++++++..+... ++++.++++|++.|+|.+..++.+..++.+|||++||+++|+..++.++|+++.+++...++.+
T Consensus 103 iG~ll~ala~~~~i~-~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~ 181 (591)
T PTZ00207 103 LGTLLFALTFQEVIE-GSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFPSNRGAVVAIMKTFTGLGSAILGSIQLAFFSD 181 (591)
T ss_pred HHHHHHHHHhccccc-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999887554443 4799999999999999999999999999999999999999999999999999999998888776
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhccCCCCCC--------CchhH-----------------HHHHHHHHHHHHHHHHHH
Q 007665 181 DAKSMILLIAWLPALVSLVFVYTIRPLKVSSH--------PNELK-----------------VFYEYLYITISLALCLMG 235 (594)
Q Consensus 181 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--------~~~~~-----------------~f~~~~~~~~~~~~~~~~ 235 (594)
+++++++++++.+.+..++...+++.+|+.+. .+++. .|.....+.+++++++.+
T Consensus 182 ~~~~~fl~l~vl~~vv~ll~~~~vr~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~yl~~ 261 (591)
T PTZ00207 182 NTSAYFFFLMSFALVVGILAIVFMRLPPFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIVFLPL 261 (591)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhheeCCcchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHHHHHH
Confidence 67788888899898888888888888864321 12222 455556677788888888
Q ss_pred HhhhhcccCCCCccccchhhHHH-Hhhhhc-chhhhhhhhhhhhcCCCCCCCcccccccccchhhhhhhhhhhccccccc
Q 007665 236 LTIAQKQAHFPHVGYIGSAIAVC-IFVFLP-LFIAFREEFAAWQQRKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQ 313 (594)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (594)
......+.+.++..+...+++++ +++++| +.++.+.... +.+ +.+++. + + +++.++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~v~~~lll~~p~l~ip~~~~~~-~~~---~~~~~~-----~-------~------~~~~~~ 319 (591)
T PTZ00207 262 QGALVAYLKLGSNFKVGFAVTVIVLTVIFPFMAFPLTTFDG-KRP---HDDSDG-----K-------A------KEHVEA 319 (591)
T ss_pred HHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhhhHHHhcc-CCc---CCCccc-----c-------c------cccccc
Confidence 88888888888887777777655 666777 6666654211 111 000000 0 0 000000
Q ss_pred ccccccCCCCCCCCCcCCC-CCCCCCCCCCccHHHhhchHHHHHHHHHHHhhccccceeeccHHHHHHhc-CCCCCc--c
Q 007665 314 TLQTENKKQEPDQTPCCGN-IFKPPKRGEDYGILQALLSIDMLILFLATFCGLGCSLTAIDNLGQIGESL-GYPQHT--I 389 (594)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~s~~~--a 389 (594)
+. +. ++++......+ ....|+.. .++++.+++.+||++++.++|..+.+..+++|+.++.+++ |.+.++ .
T Consensus 320 ~~--~~--~~~~~~~~~~~~~~~~P~~~--~t~~q~l~~~d~Wll~~~~~cg~g~gl~~~~N~~qI~~sl~g~~~~~~~~ 393 (591)
T PTZ00207 320 GE--EV--SAAEDKVVETDVDYIAPQFQ--ETFIEGLKTARLWCLLWSIFCCVGAHFVIIFNARFIYTALAGEAPDDALN 393 (591)
T ss_pred cc--cc--cccccccccccccCCCCCCc--chHHHHHhchhHHHHHHHHHHhhCchheeeecHHHHHHHhcCCCCCccce
Confidence 00 00 00000000000 01223333 3889999999999999999999999999999999999999 874433 3
Q ss_pred hhhHHHHhhhhhHhhhhhccccHHHhhhcc----CCchHHHHHHHHHHHHHHHHHhccCc-chHHHHHHHHHHHhhhhHH
Q 007665 390 NTFVSLVSIWNYFGRVFAGFVSEIILLKYK----VPRPLIMAISLILSAVGDVLIAFPKP-GSVYVASLLVGFSYGAQLT 464 (594)
Q Consensus 390 ~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~----~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~l~G~~~g~~~~ 464 (594)
..+++++++++.+||+..|+++ .+-+|++ ++|...+.+..+ ++++.+++....+ ..+++..++.|+|+|..++
T Consensus 394 ~~~vsL~si~~~~GRl~~g~~~-~~~~~~~~~~r~prt~~l~~~~~-~~~~~lll~~~~p~~~L~~~~~lvg~~~G~~~~ 471 (591)
T PTZ00207 394 TLLTVLNGVGSAVGRLCMSYFE-IWSQKRRAEDRVPITIALFIPSV-CIITMLTLFLTLPKAALPLPYFIAAFANGFMAA 471 (591)
T ss_pred eeehhhhhHHHHhhHHHHHHHH-HHHHhhccccccchhHHHHHHHH-HHHHHHHHHHHCCccHhHHHHHHHHHHhhHhHH
Confidence 3478999999999999999998 4444443 677777777777 6676666665555 7899999999999999999
Q ss_pred HHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhhcccccCCCcccccccchHHHHHHHHH
Q 007665 465 LLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAG 544 (594)
Q Consensus 465 ~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~ 544 (594)
+.+.+++|+|+ ++.|+.|.+..+...+|+++++-.++|.+||+++.++ .+..|.|..||+.+|+++++
T Consensus 472 ~~~~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~-----------~~~~C~G~~C~~~~~~v~~~ 539 (591)
T PTZ00207 472 TIALVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKL-----------GQDVCTERVCVVMPLAFLLG 539 (591)
T ss_pred HHHHHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhC-----------CCCeeCCceeeHhHHHHHHH
Confidence 99999999999 9999999999999999999998999999999976553 24589999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhhccchhHHHHhH
Q 007665 545 VNIFGALITFILVMRTRRYYSGDIYKKFK 573 (594)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 573 (594)
+|+.++++...+..|+|+.+++..+||++
T Consensus 540 ~~~~g~~~s~~l~~R~r~~y~~~~~~~~~ 568 (591)
T PTZ00207 540 LSFLAFITSTYVHLQYRRLCLKALEERRR 568 (591)
T ss_pred HHHHHHHHHhheeeehHHHHHHHHHHHHH
Confidence 99999999999999999998888877664
No 2
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=100.00 E-value=1.4e-32 Score=291.19 Aligned_cols=401 Identities=14% Similarity=0.149 Sum_probs=269.9
Q ss_pred hhhHHHHHHHHHHHHh-hhhhhchhhhHHHHHHHhCCCHhHHHHHHHHHh-hhhhhhhhhhhhhcccCchHHHHHHHHHH
Q 007665 22 RGRWFMMFASFLIMAG-AGATYLFGTYSKEIKSTLGYDQTTLNLLSTCKD-LGANVGVLSGLLAEVTPPWLVLLVGSAMN 99 (594)
Q Consensus 22 ~~~w~~~~~~~l~~~~-~g~~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~-~~~~~~~~~G~l~Dr~G~r~v~~~g~~l~ 99 (594)
.++|.++.++++.... .+..+.++.+.|++++++|.|.++.+++.+.+. ...+.+++.|+++||+|||++++.+.+++
T Consensus 15 ~~~w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~ 94 (455)
T TIGR00892 15 GWGWVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLA 94 (455)
T ss_pred CcchHHHHHHHHHHHHHHhhhcchhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHH
Confidence 4678877776666543 345677888999999999999999999555444 44567899999999999999999999999
Q ss_pred HHHHHHHHHHHhhccCChhHHHHHH-HHHHHhhhhhhhhhhhHhHHhhcCCCceeehhHHHHHhhhhHHHHHHHHHHHHh
Q 007665 100 FGGYFMIWLAVMKKIAKPKVWQMCL-YICIGANSQNFANTGSLVTCVKNFPESRGMMLGLMKGFVGLSGAVFTQIYLAIY 178 (594)
Q Consensus 100 ~ig~~l~~~a~~~~~~~~~~~~l~~-~r~l~G~g~g~~~~~~~~~i~~~fp~~rg~~~gi~~~~~glg~~i~~~l~~~l~ 178 (594)
.+++++++++ ++++.+++ .|++.|++.+...++...++.+|||++|+++.|+...+..+|..+++++.+.+.
T Consensus 95 ~~~~~~~~~~-------~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~r~~a~g~~~~~~~~g~~~~~~l~~~l~ 167 (455)
T TIGR00892 95 SLGMILASFS-------SNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFYRRRPLANGLAMAGSPVFLSTLAPLNQYLF 167 (455)
T ss_pred HHHHHHHHHh-------hhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHhhHHHHHHHHHhcccHHHHHHHHHHHHHH
Confidence 8888877554 56777764 579999999987777778888999989999999999999999998887665544
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHH
Q 007665 179 GNDAKSMILLIAWLPALVSLVFVYTIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVC 258 (594)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (594)
+. .+||..|.....+.++..++.
T Consensus 168 ~~--------------------------------~gwr~~f~~~~~~~~~~~v~~------------------------- 190 (455)
T TIGR00892 168 ES--------------------------------FGWRGSFLILGGLLLHCCVCG------------------------- 190 (455)
T ss_pred HH--------------------------------hChHHHHHHHHHHHHHHHHHH-------------------------
Confidence 32 256655552211111000000
Q ss_pred HhhhhcchhhhhhhhhhhhcCCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCC
Q 007665 259 IFVFLPLFIAFREEFAAWQQRKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPK 338 (594)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (594)
+..+++...+. . ++++. ++ .. +. + ...++.+. .... +
T Consensus 191 --------~~~~~~~~~~~-~----~~~~~---~~---------------~~-~~----~-~~~~~~~~-----~~~~-~ 227 (455)
T TIGR00892 191 --------ALMRPVGPSQR-V----SKSKS---KE---------------GL-PP----D-GSTKKLSK-----KSTA-E 227 (455)
T ss_pred --------HHhCCCCcccc-c----ccccc---cc---------------cC-CC----C-Cccccccc-----cchh-h
Confidence 00111000000 0 00000 00 00 00 0 00000000 0000 0
Q ss_pred CCCCccHHHhhchHHHHHHHHHHHhhccccceeeccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhc
Q 007665 339 RGEDYGILQALLSIDMLILFLATFCGLGCSLTAIDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKY 418 (594)
Q Consensus 339 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~ 418 (594)
...+....+++++|.+|......++.....+....+++.+.++.|+++.+++...++.+++.++++++.|+++||...|.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~ 307 (455)
T TIGR00892 228 KINRFLDFSLFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRP 307 (455)
T ss_pred hhhhhcchHHhcCchHHHHHHHHHHHHHHccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCH
Confidence 00001113678899998877766665555555666778888889999999999999999999999999999999742111
Q ss_pred cCCchHHHHHHHHHHHHHHHHHhcc-CcchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhh
Q 007665 419 KVPRPLIMAISLILSAVGDVLIAFP-KPGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVL 497 (594)
Q Consensus 419 ~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~ 497 (594)
.+...+..+.++.+++.++.... +.+.+++..++.|++.+...+...+++.|.+|++++++.+|+.++...+|+++
T Consensus 308 --~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~i- 384 (455)
T TIGR00892 308 --HVQYLFSFALLFNGLTHLLCALAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLI- 384 (455)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHc-
Confidence 11222333333333333333322 33455667888999999888888999999999999999999999999999976
Q ss_pred hhhHHHhhhhHHHHHhhhhhhcccccCCCcccccccchHHHHHHHHHHHHHHHHHHHH
Q 007665 498 NVIVVGRLYDREAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFI 555 (594)
Q Consensus 498 gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~ 555 (594)
||.+.|.+.|. .++|+..|++.+++.+++.+...+
T Consensus 385 gp~i~G~l~~~-----------------------~g~~~~~f~~~~~~~li~~~~~~~ 419 (455)
T TIGR00892 385 GPPLAGRLVDA-----------------------TKNYKYIFYASGSIVVSAGLFLAI 419 (455)
T ss_pred cccceeeeehh-----------------------cCCcchHHHHhhHHHHHHHHHHHH
Confidence 99999999987 357999999988887776654433
No 3
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.4e-33 Score=295.02 Aligned_cols=426 Identities=20% Similarity=0.266 Sum_probs=311.5
Q ss_pred hhhHHHHHHHHHHHH-hhhhhhchhhhHHHHHHHhCCCHhHHHHHHHHH-hhhhhhhhhhhhhhcccCchHHHHHHHHHH
Q 007665 22 RGRWFMMFASFLIMA-GAGATYLFGTYSKEIKSTLGYDQTTLNLLSTCK-DLGANVGVLSGLLAEVTPPWLVLLVGSAMN 99 (594)
Q Consensus 22 ~~~w~~~~~~~l~~~-~~g~~~~~~~~~~~l~~~~~~s~~~~~~~~~~~-~~~~~~~~~~G~l~Dr~G~r~v~~~g~~l~ 99 (594)
-+.|.+++++++..+ +.|..+.++++.+.++++++.+..+++|+.+.. .+..+.+|+.+.+.||||.|++.++|.++.
T Consensus 42 G~gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~ 121 (509)
T KOG2504|consen 42 GWGWVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVA 121 (509)
T ss_pred CeeeeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHH
Confidence 367899888888875 558899999999999999999999999965554 455566999999999999999999999999
Q ss_pred HHHHHHHHHHHhhccCChhHHHHHH-HHHHHhhhhhhhhhhhHhHHhhcCCCceeehhHHHHHhhhhHHHHHHHHHHHHh
Q 007665 100 FGGYFMIWLAVMKKIAKPKVWQMCL-YICIGANSQNFANTGSLVTCVKNFPESRGMMLGLMKGFVGLSGAVFTQIYLAIY 178 (594)
Q Consensus 100 ~ig~~l~~~a~~~~~~~~~~~~l~~-~r~l~G~g~g~~~~~~~~~i~~~fp~~rg~~~gi~~~~~glg~~i~~~l~~~l~ 178 (594)
.+|.++..++ ++++++++ +.++.|+|.|+.+.++..++..||+|||+.|.|+..++.|+|..++|++...++
T Consensus 122 ~~g~~lssF~-------~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~ 194 (509)
T KOG2504|consen 122 ALGLLLSSFA-------TSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFEKKRALATGIAVSGTGVGTVVFPPLLKYLL 194 (509)
T ss_pred HHHHHHHHHH-------hhHHHHHHHHHHHhhccchhhhcchhhhhhhHhHHHHHHHHhhhhccCCcceeeHHHHHHHHH
Confidence 9999998777 77888775 889999999999999999999999999999999999999999999999999888
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHH
Q 007665 179 GNDAKSMILLIAWLPALVSLVFVYTIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVC 258 (594)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (594)
+..+|+.-.++.....+..++....+|+.++......
T Consensus 195 ~~~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~~------------------------------------------- 231 (509)
T KOG2504|consen 195 SKYGWRGALLIFGGISLNVLVAGALLRPLSPPKKPNE------------------------------------------- 231 (509)
T ss_pred HHhCcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCchh-------------------------------------------
Confidence 7655544444333333333333344443322211000
Q ss_pred HhhhhcchhhhhhhhhhhhcCCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCC
Q 007665 259 IFVFLPLFIAFREEFAAWQQRKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPK 338 (594)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (594)
+++.+. .. ...+ .... ..+++.++..+... +.+...+...++..++.+
T Consensus 232 -------------------~~~~~~-~~---~~~~-------~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 279 (509)
T KOG2504|consen 232 -------------------EKDLRN-SA---ASVE-------STPK-PVELRISERDSGLK-KLSLSNLATLKRGPDKWR 279 (509)
T ss_pred -------------------hhhhcc-cc---cccc-------cccc-ccccccccCCCCCC-cccccchhhhhhCCcccc
Confidence 000000 00 0000 0000 00000000000000 000000000000000000
Q ss_pred --CCCCcc---HHHhhchHHHHHHHHHHHhhccccceeeccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHH
Q 007665 339 --RGEDYG---ILQALLSIDMLILFLATFCGLGCSLTAIDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEI 413 (594)
Q Consensus 339 --~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr 413 (594)
..+... .++++|++.|+.+.+...+.+..++.....+|.+.++.|+++.+++.++++.++.+++||++.|+++|+
T Consensus 280 ~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~ 359 (509)
T KOG2504|consen 280 NSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADK 359 (509)
T ss_pred ccchhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCc
Confidence 001111 268899999999999988888887778888899999999999999999999999999999999999998
Q ss_pred HhhhccCCchHHHHHHHHHHHHHHHHHhccC-cchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchh
Q 007665 414 ILLKYKVPRPLIMAISLILSAVGDVLIAFPK-PGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPL 492 (594)
Q Consensus 414 ~g~r~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~l 492 (594)
...+ +.++..++.+...++...+...+ ...++...+++|++.|......+.++.|+++.++...++|+...+..+
T Consensus 360 ~~~~----~~~~~~~~ll~~gl~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi 435 (509)
T KOG2504|consen 360 PGIR----ALVLFLLTLLIAGLARLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGI 435 (509)
T ss_pred cccc----hHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHH
Confidence 7632 34666677767666665555444 457788899999999999999999999999999999999999999999
Q ss_pred hhhhhhhhHHHhhhhHHHHHhhhhhhcccccCCCcccccccchHHHHHHHHHHHHHHHHHHHHHH
Q 007665 493 GSYVLNVIVVGRLYDREAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFILV 557 (594)
Q Consensus 493 g~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 557 (594)
+..+ ||++.|.++|. +++|...|++.+++.+++....+...
T Consensus 436 ~~l~-gpPiag~~~d~-----------------------tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 436 GALV-GPPIAGLLYDI-----------------------TGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred HHHc-Ccccceeeeec-----------------------cCCeeeehhhcChHHHHHHHHHHHhH
Confidence 9976 99999999998 47799999999999988887776665
No 4
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.1e-32 Score=265.25 Aligned_cols=407 Identities=16% Similarity=0.099 Sum_probs=294.3
Q ss_pred HhhhHHHHHHHHHHHHhhh-hhhchhhhHHHHHHHhCCCHhHHHHHH-HHHhhhhhhhhhhhhhhcccCchHHHHHHHHH
Q 007665 21 LRGRWFMMFASFLIMAGAG-ATYLFGTYSKEIKSTLGYDQTTLNLLS-TCKDLGANVGVLSGLLAEVTPPWLVLLVGSAM 98 (594)
Q Consensus 21 ~~~~w~~~~~~~l~~~~~g-~~~~~~~~~~~l~~~~~~s~~~~~~~~-~~~~~~~~~~~~~G~l~Dr~G~r~v~~~g~~l 98 (594)
++.||.+++..++...+.- ....++...|+++++.++|.+|++++. .++..+++.-.+.|.++||.++|..+.+|+++
T Consensus 24 ~~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLil 103 (448)
T COG2271 24 KRWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLIL 103 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHH
Confidence 4566667777777666654 677899999999999999999999955 55556668899999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccCChhHHHHHHHHHHHhhhhhhhhhhhHhHHhhcCCC-ceeehhHHHHHhhhhHHHHHHHHH--H
Q 007665 99 NFGGYFMIWLAVMKKIAKPKVWQMCLYICIGANSQNFANTGSLVTCVKNFPE-SRGMMLGLMKGFVGLSGAVFTQIY--L 175 (594)
Q Consensus 99 ~~ig~~l~~~a~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp~-~rg~~~gi~~~~~glg~~i~~~l~--~ 175 (594)
.++..++++++ ++...+.++.++.|..+|+..|++..++++|||+ +||+..+++++...+|+.+.+++. .
T Consensus 104 sai~nil~Gfs-------~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la 176 (448)
T COG2271 104 SAIVNILFGFS-------PSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLA 176 (448)
T ss_pred HHHHHHHHhhh-------hHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHH
Confidence 99999988776 6788888999999999999999999999999985 799999999999999999987665 2
Q ss_pred HHhCCChHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhh
Q 007665 176 AIYGNDAKSMILLIAWLPALVSLVFVYTIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAI 255 (594)
Q Consensus 176 ~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (594)
.+.. +.+||..|..-.+++++.+++++
T Consensus 177 ~~~~--------------------------------~~~w~~~f~~pgiiaiival~~~--------------------- 203 (448)
T COG2271 177 FFAF--------------------------------HGGWRAAFYFPGIIAIIVALILL--------------------- 203 (448)
T ss_pred HHHh--------------------------------ccchhHHHHHHHHHHHHHHHHHH---------------------
Confidence 2222 34677776622222221111111
Q ss_pred HHHHhhhhcchhhhhhhhhhhhcCCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCC
Q 007665 256 AVCIFVFLPLFIAFREEFAAWQQRKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFK 335 (594)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (594)
...+++++ +..-|+-+ +.++|..+. . .++...
T Consensus 204 -----------~~~rd~Pq------s~GLP~ie-----------------~~~~d~~e~---~-----------~~~~~~ 235 (448)
T COG2271 204 -----------FLLRDRPQ------SEGLPPIE-----------------EYRGDPLEI---Y-----------EEEKEN 235 (448)
T ss_pred -----------HHhCCCcc------ccCCCCHH-----------------HhhcCchhh---h-----------hhhccC
Confidence 11111100 00001100 000000000 0 000000
Q ss_pred CCCCCCCccHHHhhchHHHHHHHHHHHhhccccceeeccHHHHHHh-cCCCCCcchhhHHHHhhhhhHhhhhhccccHHH
Q 007665 336 PPKRGEDYGILQALLSIDMLILFLATFCGLGCSLTAIDNLGQIGES-LGYPQHTINTFVSLVSIWNYFGRVFAGFVSEII 414 (594)
Q Consensus 336 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~ 414 (594)
++....+.-.+-.++||..|.+.+++++.+..=+.+..|.|.|+.+ .|+|..++....+.+-+++..|.+++||++||+
T Consensus 236 ~~ls~~~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDkl 315 (448)
T COG2271 236 EGLTAWQIFVKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKL 315 (448)
T ss_pred CCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 0011112334567899999999999999888888899999998875 599999999999999999999999999999997
Q ss_pred hhhccCCchHHHHHHHHHHHHHHHHHhccCc---chHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccch
Q 007665 415 LLKYKVPRPLIMAISLILSAVGDVLIAFPKP---GSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASP 491 (594)
Q Consensus 415 g~r~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ 491 (594)
-+.+ |....++..++..++++.+...+. ....+++++.|+...+...++...+.|..|++-.|++.|+...+.-
T Consensus 316 fkgr---R~p~~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Y 392 (448)
T COG2271 316 FKGR---RGPMALIFMLLITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAY 392 (448)
T ss_pred cccc---cchHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHH
Confidence 5332 224444555555555555554332 3455567888988888787888889999999999999999999998
Q ss_pred hhhhhhhhhHHHhhhhHHHHHhhhhhhcccccCCCcccccccchHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 007665 492 LGSYVLNVIVVGRLYDREAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFILVMRTRR 562 (594)
Q Consensus 492 lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 562 (594)
+++..++....|++.|. .+|...|+++.+.++++.++.+.+...+++
T Consensus 393 l~Ga~~a~~~~g~i~d~------------------------~gW~g~Fi~~~~~a~l~~lll~~~~~~~~~ 439 (448)
T COG2271 393 LIGAALAGLPLGYIADT------------------------WGWDGGFIVLSIAALLAILLLLPVWNAEER 439 (448)
T ss_pred HhhHHhcCCcceeeEec------------------------CCCcchHHHHHHHHHHHHHHHHHHHhhcch
Confidence 84445577888888887 579999999999888888877776654443
No 5
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=100.00 E-value=1.9e-31 Score=284.05 Aligned_cols=415 Identities=13% Similarity=-0.002 Sum_probs=261.5
Q ss_pred hHHHHHHHHHHHHhh-hhhhchhhhHHHHHHHhCCCHhHHHHHHHHHhhhh-hhhhhhhhhhcccCchHHHHHHHHHHHH
Q 007665 24 RWFMMFASFLIMAGA-GATYLFGTYSKEIKSTLGYDQTTLNLLSTCKDLGA-NVGVLSGLLAEVTPPWLVLLVGSAMNFG 101 (594)
Q Consensus 24 ~w~~~~~~~l~~~~~-g~~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr~G~r~v~~~g~~l~~i 101 (594)
.|.++...++..... .+...++...|.+++|+|+|.++.+++.+.+.++. +.+++.|+++||+|||+++.++.++.++
T Consensus 27 ~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~ 106 (467)
T PRK09556 27 FMQSYLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAI 106 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHH
Confidence 444555544444443 36778889999999999999999999666665555 6689999999999999999999888888
Q ss_pred HHHHHHHHHhhccCChhHHHHHHHHHHHhhhhhhhhhhhHhHHhhcCC-CceeehhHHHHHhhhhHHHHHHHHHHHHhCC
Q 007665 102 GYFMIWLAVMKKIAKPKVWQMCLYICIGANSQNFANTGSLVTCVKNFP-ESRGMMLGLMKGFVGLSGAVFTQIYLAIYGN 180 (594)
Q Consensus 102 g~~l~~~a~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp-~~rg~~~gi~~~~~glg~~i~~~l~~~l~~~ 180 (594)
+.++.++..+... ++++.+++.|+++|++.+...+....++.+|+| ++||+++|+...+.++|.++++.+...+...
T Consensus 107 ~~~~~~~~~~~~~--~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~ 184 (467)
T PRK09556 107 CMLGFGASLGSGS--VSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANY 184 (467)
T ss_pred HHHHHHHHHhccc--chHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHh
Confidence 7776655433322 679999999999999999999999999999998 5799999999998889998887554322110
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHHh
Q 007665 181 DAKSMILLIAWLPALVSLVFVYTIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCIF 260 (594)
Q Consensus 181 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (594)
.. ..+|+..|.....+++. +.+
T Consensus 185 ----------------------~~-------~~~~~~~f~~~g~~~~~---~~i-------------------------- 206 (467)
T PRK09556 185 ----------------------FF-------DGHVIGMFIFPSIIALI---IGF-------------------------- 206 (467)
T ss_pred ----------------------hc-------cCcchhHHHHHHHHHHH---HHH--------------------------
Confidence 00 11455544421111110 000
Q ss_pred hhhcchhhhhhhhhhhhcCCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCCC
Q 007665 261 VFLPLFIAFREEFAAWQQRKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKRG 340 (594)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (594)
+.....+++++. + ...+++ + ..++ + ..++ .+ + ..+++...
T Consensus 207 ---~~~~~~~~~p~~---~--~~~~~~-----~-------------~~~~---~---~~~~--~~-----~-~~~~~~~~ 246 (467)
T PRK09556 207 ---IGLRYGSDSPEE---L--GWGKAE-----E-------------IFGE---P---ISEE--DK-----E-TESTDMTK 246 (467)
T ss_pred ---HHHHhCCCChhh---c--CCCChh-----h-------------cccC---c---cchh--hh-----c-cccccCcH
Confidence 000111111000 0 000000 0 0000 0 0000 00 0 00000000
Q ss_pred CCccHHHhhchHHHHHHHHHHHhhccccceeeccHHHHHH-hcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhcc
Q 007665 341 EDYGILQALLSIDMLILFLATFCGLGCSLTAIDNLGQIGE-SLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYK 419 (594)
Q Consensus 341 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~ 419 (594)
.+...++.+|+|.+|...+..++..........+.|.|++ +.|+|+.+++...+...++..+|++++|+++||+++|+
T Consensus 247 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~- 325 (467)
T PRK09556 247 WQIFVEYVLKNPVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRR- 325 (467)
T ss_pred HHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCc-
Confidence 0001234789999999888877766666666778898886 47999999999999999999999999999999998773
Q ss_pred CCchHHHHHHHHHHHHH--HHHHhccC-cchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchh-hhh
Q 007665 420 VPRPLIMAISLILSAVG--DVLIAFPK-PGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPL-GSY 495 (594)
Q Consensus 420 ~~~~~~~~~~~~~~~i~--~~~~~~~~-~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~l-g~~ 495 (594)
.... ...+..++ .+.+...+ ....++..++.|++.............|.+|++++|+++|+.+....+ |++
T Consensus 326 ----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~ 400 (467)
T PRK09556 326 ----ALVA-CIALALIIFTLGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDS 400 (467)
T ss_pred ----hHHH-HHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHH
Confidence 2222 11111122 12222222 223344555666544333333445677999999999999999999887 555
Q ss_pred hhhhhHHHhhhhHHHHHhhhhhhcccccCCCcccccccchHHHHHHHHHHHHHHHHHHHHHH
Q 007665 496 VLNVIVVGRLYDREAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFILV 557 (594)
Q Consensus 496 ~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 557 (594)
+ +|.+.|.+.|...+.. ...-....+|+..|++..++.+++.+..+.+.
T Consensus 401 ~-~~~~~G~i~~~~~~g~------------~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 449 (467)
T PRK09556 401 F-AKVGLGMIADPTKNGT------------PIFGYTLTGWAGTFAALDIAAIGCICLMAIVA 449 (467)
T ss_pred H-HhhhHHHHhccccccc------------ccccccccChHHHHHHHHHHHHHHHHHHHHHH
Confidence 4 8999999999210000 00000014599999999888888877666553
No 6
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=100.00 E-value=4.4e-32 Score=280.77 Aligned_cols=370 Identities=20% Similarity=0.256 Sum_probs=269.9
Q ss_pred hHHHHHHHHHHHHhhhhhhchhhhHHHHHHHhCCCHhHHHHHHHHHhhhh-hhhhhhhhhhcccCchHHHHHHHHHHHHH
Q 007665 24 RWFMMFASFLIMAGAGATYLFGTYSKEIKSTLGYDQTTLNLLSTCKDLGA-NVGVLSGLLAEVTPPWLVLLVGSAMNFGG 102 (594)
Q Consensus 24 ~w~~~~~~~l~~~~~g~~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr~G~r~v~~~g~~l~~ig 102 (594)
+|.++...+...+..+..+.++.+.|.+++++|+|.++.+++.+.+.++. +.+++.|+++||+|||+++.++.++.+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~ 81 (377)
T TIGR00890 2 WWYVLVGTVIMCFTSGYVYTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLG 81 (377)
T ss_pred eEEEeHHHHHHHHHhhHHhhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHH
Confidence 46666666666677778888999999999999999999999666666665 66899999999999999999999999999
Q ss_pred HHHHHHHHhhccCChhHHHHHHHHHHHhhhhhhhhhhhHhHHhhcCCCceeehhHHHHHhhhhHHHHHHHHHHHHhCCCh
Q 007665 103 YFMIWLAVMKKIAKPKVWQMCLYICIGANSQNFANTGSLVTCVKNFPESRGMMLGLMKGFVGLSGAVFTQIYLAIYGNDA 182 (594)
Q Consensus 103 ~~l~~~a~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp~~rg~~~gi~~~~~glg~~i~~~l~~~l~~~~~ 182 (594)
.++++++ ++++.+++.|++.|++.+..++.....+.+|+|++|+++.++...+.++|..+++++...+.+.
T Consensus 82 ~~~~~~~-------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-- 152 (377)
T TIGR00890 82 FTFYAIA-------DSLAALYLTYGLASAGVGIAYGIALNTAVKWFPDKRGLASGIIIGGYGLGSFILSPLITSVINL-- 152 (377)
T ss_pred HHHHHHH-------HHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcCcccHHHHHHHHHhcchhHhHHHHHHHHHHhc--
Confidence 8887665 7899999999999999998888888889999999999999999999999988877665543322
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHHhhh
Q 007665 183 KSMILLIAWLPALVSLVFVYTIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCIFVF 262 (594)
Q Consensus 183 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (594)
.+||..|.......+...+
T Consensus 153 ------------------------------~~~~~~f~~~~~~~~~~~~------------------------------- 171 (377)
T TIGR00890 153 ------------------------------EGVPAAFIYMGIIFLLVIV------------------------------- 171 (377)
T ss_pred ------------------------------ccHHHHHHHHHHHHHHHHH-------------------------------
Confidence 3566555421111110000
Q ss_pred hcchhhhhhhhhhhhcCCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCCCCC
Q 007665 263 LPLFIAFREEFAAWQQRKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKRGED 342 (594)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (594)
+.....+++++ + + .+++ ...+ .++
T Consensus 172 -~~~~~~~~~~~-----------~------~------------------------~~~~-----------~~~~---~~~ 195 (377)
T TIGR00890 172 -LGAFLIGYPPG-----------Q------L------------------------IKTN-----------IEVS---VKD 195 (377)
T ss_pred -HHHHheecCch-----------h------c------------------------cccC-----------cccc---hhh
Confidence 00001110000 0 0 0000 0000 001
Q ss_pred ccHHHhhchHHHHHHHHHHHhhccccceeeccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCc
Q 007665 343 YGILQALLSIDMLILFLATFCGLGCSLTAIDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPR 422 (594)
Q Consensus 343 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~ 422 (594)
...++.+|++.+|.+...+++..........+.+++.++.|.++.+++...++..++..+++++.|++.||++||+
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~---- 271 (377)
T TIGR00890 196 YTVWEMLRTPQFWVLYLSFFLNAVSGLLLIGLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQK---- 271 (377)
T ss_pred hhHHHHHcCccHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh----
Confidence 2346778888888877666655444444444566677888888888888999999999999999999999998873
Q ss_pred hHHHHHHHHHHHHHHHHHhccC-c--chHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhh
Q 007665 423 PLIMAISLILSAVGDVLIAFPK-P--GSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNV 499 (594)
Q Consensus 423 ~~~~~~~~~~~~i~~~~~~~~~-~--~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp 499 (594)
.+..+.++..++.+++...+ . ...+...++.|++.+...+..+.++.|.+|+++++++.|+.+....+|+.+ +|
T Consensus 272 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~-~~ 348 (377)
T TIGR00890 272 --TMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIF-GG 348 (377)
T ss_pred --hhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHH-HH
Confidence 34455555555555444332 1 123344567788888878888889999999999999999999999999976 99
Q ss_pred hHHHhhhhHHHHHhhhhhhcccccCCCcccccccchHHHHHHHHHHHHHHH
Q 007665 500 IVVGRLYDREAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGA 550 (594)
Q Consensus 500 ~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~ 550 (594)
.+.|.+.|. .+|+..|.+.+++.++++
T Consensus 349 ~~~g~l~~~------------------------~g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 349 LIASHALTE------------------------IGFEYTFIVTGAFALTSL 375 (377)
T ss_pred HHHHHHHhh------------------------hchhhHHHHHHHHHHHhc
Confidence 999999887 579999998887776654
No 7
>PRK11663 regulatory protein UhpC; Provisional
Probab=100.00 E-value=6e-31 Score=277.48 Aligned_cols=404 Identities=16% Similarity=0.087 Sum_probs=258.5
Q ss_pred hhHHHHHHHHHHHHhh-hhhhchhhhHHHHHHHhCCCHhHHHHHHHHHhhhh-hhhhhhhhhhcccCchHHHHHHHHHHH
Q 007665 23 GRWFMMFASFLIMAGA-GATYLFGTYSKEIKSTLGYDQTTLNLLSTCKDLGA-NVGVLSGLLAEVTPPWLVLLVGSAMNF 100 (594)
Q Consensus 23 ~~w~~~~~~~l~~~~~-g~~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr~G~r~v~~~g~~l~~ 100 (594)
.+|.++...++..++. ...+.++...|++.+++|+|.++.+++.+.+.++. +.+++.|++.||+|||+++.++.++..
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~ 99 (434)
T PRK11663 20 WRRHILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATG 99 (434)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHH
Confidence 3444444444444333 34567788899999999999999999666666555 668999999999999999999999999
Q ss_pred HHHHHHHHHHhhccCChhHHHHHHHHHHHhhhhhhhhhhhHhHHhhcCC-CceeehhHHHHHhhhhHHHHHHHHHHHHhC
Q 007665 101 GGYFMIWLAVMKKIAKPKVWQMCLYICIGANSQNFANTGSLVTCVKNFP-ESRGMMLGLMKGFVGLSGAVFTQIYLAIYG 179 (594)
Q Consensus 101 ig~~l~~~a~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp-~~rg~~~gi~~~~~glg~~i~~~l~~~l~~ 179 (594)
++.+++.++ ++++.+++.|++.|++.|..++....++.+|+| ++|++++|+...+.++|..+++.+.+.+.+
T Consensus 100 ~~~~~~~~~-------~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~ 172 (434)
T PRK11663 100 IINILFGFS-------SSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIAL 172 (434)
T ss_pred HHHHHHHHH-------hHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 988877654 688899999999999999888888899999998 579999999999999999998876655443
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHH
Q 007665 180 NDAKSMILLIAWLPALVSLVFVYTIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCI 259 (594)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (594)
. .+||..|.....+.+...
T Consensus 173 ~--------------------------------~gw~~~f~~~~i~~~~~~----------------------------- 191 (434)
T PRK11663 173 H--------------------------------YGWRYGMMIAGIIAIVVG----------------------------- 191 (434)
T ss_pred c--------------------------------ccHHHHHHHHHHHHHHHH-----------------------------
Confidence 2 356655542111110000
Q ss_pred hhhhcchhhhhhhhhhhhcCCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCC
Q 007665 260 FVFLPLFIAFREEFAAWQQRKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKR 339 (594)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (594)
+...+.++++++. .. .++.. +. +++ ..+ .++ ..+.++.
T Consensus 192 ---~~~~~~~~~~p~~-~~-----~~~~~---~~--------------~~~-------~~~---~~~------~~~~~~~ 229 (434)
T PRK11663 192 ---LFLCWRLRDKPQA-MG-----LPSVG---EW--------------RHD-------ALE---LAQ------QQEGAGL 229 (434)
T ss_pred ---HHHHHHcCCCHhh-cC-----CCCcc---cc--------------ccc-------ccc---cch------hccccCC
Confidence 0000111111100 00 00000 00 000 000 000 0000000
Q ss_pred CCCccH-HHhhchHHHHHHHHHHHhhccccceeeccHHHHHH-hcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhh
Q 007665 340 GEDYGI-LQALLSIDMLILFLATFCGLGCSLTAIDNLGQIGE-SLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLK 417 (594)
Q Consensus 340 ~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r 417 (594)
.....+ ...++++.+|.+.+.+++.......+..++|.+++ +.|++..+++...+.+.+++.+|+++.|+++||+.+|
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~ 309 (434)
T PRK11663 230 SRKEILTKYVLLNPYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNG 309 (434)
T ss_pred ChhhhHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccC
Confidence 000011 23677899998877766655555555667888885 5699999999999999999999999999999999543
Q ss_pred ccCCchHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhh
Q 007665 418 YKVPRPLIMAISLILSAVGDVLIAFPKPGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVL 497 (594)
Q Consensus 418 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~ 497 (594)
.+.........+.+...+.+......+........+.+|++.............|.+|++++|++.|+.++...+|+.+
T Consensus 310 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~- 388 (434)
T PRK11663 310 NRGPMNLIFAAGILLSVGSLWLMPFASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAAL- 388 (434)
T ss_pred CccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHH-
Confidence 2101111112222222222222211111122222333343333233344566789999999999999999999999976
Q ss_pred hhhHHHhhhhHHHHHhhhhhhcccccCCCcccccccchHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 007665 498 NVIVVGRLYDREAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFILVMRTR 561 (594)
Q Consensus 498 gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~ 561 (594)
+|.+.|.+.|. .+|+..|++.+++.+++.+..+...++++
T Consensus 389 ~p~~~g~l~~~------------------------~g~~~~f~~~~~~~~~~~~~~~~~~~~~~ 428 (434)
T PRK11663 389 SGYPLAKVLEI------------------------WHWTGFFVVISIAAGISALLLLPFLNAQA 428 (434)
T ss_pred hcccHHHHHHh------------------------cccHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 99999999987 46999999999888887766655544333
No 8
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=100.00 E-value=5.3e-31 Score=274.20 Aligned_cols=361 Identities=11% Similarity=0.043 Sum_probs=259.5
Q ss_pred hhhchhhhHHHHHHHhCCCHhHHHHHHHHHhhhh-hhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhccCChh
Q 007665 40 ATYLFGTYSKEIKSTLGYDQTTLNLLSTCKDLGA-NVGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIAKPK 118 (594)
Q Consensus 40 ~~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~~~ 118 (594)
..++.+...|.+++|+|+|..+.+++.+.+.++. +.+++.|+++||+|||+++..+.++++++.++++++ ++
T Consensus 24 ~~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a-------~~ 96 (393)
T PRK09705 24 LLTSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELY-------PQ 96 (393)
T ss_pred hhhccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHC-------cc
Confidence 3467889999999999999999999665555555 668999999999999999999999999999988765 78
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhHhHHhhcCCCceeehhHHHHHhhhhHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHH
Q 007665 119 VWQMCLYICIGANSQNFANTGSLVTCVKNFPESRGMMLGLMKGFVGLSGAVFTQIYLAIYGNDAKSMILLIAWLPALVSL 198 (594)
Q Consensus 119 ~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp~~rg~~~gi~~~~~glg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~l 198 (594)
++.+++.|+++|+|.+..++.....+.++||++|++++|++.++...|..+++.+...+.+.
T Consensus 97 ~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~------------------ 158 (393)
T PRK09705 97 SALLLSSALLGGVGIGIIQAVMPSVIKRRFQQRTPLVMGLWSAALMGGGGLGAAITPWLVQH------------------ 158 (393)
T ss_pred hHHHHHHHHHHHhHHHHHhhhhhHHHHHHccccchhHHHHHHHHHHHHHHHHHHHHHHHHHh------------------
Confidence 99999999999999999988888899999998999999999888878888877655433221
Q ss_pred HHHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHHhhhhcchhhhhhhhhhhhc
Q 007665 199 VFVYTIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCIFVFLPLFIAFREEFAAWQQ 278 (594)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (594)
..+||..+..+....+ +..+ ..+...++
T Consensus 159 -------------~~~w~~~~~~~~~~~~---~~~~------------------------------~~~~~~~~------ 186 (393)
T PRK09705 159 -------------SETWYQTLAWWALPAV---VALF------------------------------AWWWQSAR------ 186 (393)
T ss_pred -------------cCCHHHHHHHHHHHHH---HHHH------------------------------HHHHHhcC------
Confidence 1256655542211110 0000 00000000
Q ss_pred CCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCCCCCccHHHhhchHHHHHHH
Q 007665 279 RKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKRGEDYGILQALLSIDMLILF 358 (594)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 358 (594)
+++ + + + ++++ ..++.+|++.+|.+.
T Consensus 187 -----~~~------~------------------------~-----~---------~~~~------~~~~~l~~~~~~~l~ 211 (393)
T PRK09705 187 -----EVA------S------------------------S-----H---------KTTT------TPVRVVFTPRAWTLG 211 (393)
T ss_pred -----CCc------c------------------------c-----c---------CCCc------CCcccccCHhHHHHH
Confidence 000 0 0 0 0000 012345677777766
Q ss_pred HHHHhhccccceeeccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHH
Q 007665 359 LATFCGLGCSLTAIDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDV 438 (594)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~ 438 (594)
+.+++..........+.|.+++++|+++.+++...+++.+++.+|+++.|++.||++||+ ....+..+.+++..
T Consensus 212 ~~~~~~~~~~~~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~------~~~~~~~l~~~~~~ 285 (393)
T PRK09705 212 VYFGLINGGYASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRK------LLMLALVLQLVGFC 285 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchH------HHHHHHHHHHHHHH
Confidence 665555445556667888988889999999999999999999999999999999998763 34445555555544
Q ss_pred HHhccCcchHHHHHHHHHHHhhhhHHHHHHHHHHhcc-CCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhh
Q 007665 439 LIAFPKPGSVYVASLLVGFSYGAQLTLLFIIISELFG-LKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEK 517 (594)
Q Consensus 439 ~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~ 517 (594)
.+.............+.|++.+..++.......+.++ ++++|+.+|+.+....+++.+ +|.+.|++.|.
T Consensus 286 ~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~-gp~~~G~l~~~--------- 355 (393)
T PRK09705 286 GFIWLPLQLPVLWAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGL-APWFSGVLRSI--------- 355 (393)
T ss_pred HHHHccchHHHHHHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH---------
Confidence 4332121112223456688888877777666667775 578899999999999998876 99999999998
Q ss_pred hcccccCCCcccccccchHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 007665 518 GMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFILVMRTRR 562 (594)
Q Consensus 518 ~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 562 (594)
.++|+..|++..+++++..+....+.+|++.
T Consensus 356 --------------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (393)
T PRK09705 356 --------------SGNYLMDWAFHALCVVGLMIITLRFAPARFP 386 (393)
T ss_pred --------------hCCchHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 3679999999988888877776666555544
No 9
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.98 E-value=9.8e-30 Score=269.74 Aligned_cols=415 Identities=13% Similarity=0.125 Sum_probs=256.1
Q ss_pred hHHHHHHHhhhHHHHHHHHHHHHhhh-hhhchhhhHHHHHHHhCCCHhHHHHHHHHHhhh-hhhhhhhhhhhcccCchHH
Q 007665 14 CSFLLQVLRGRWFMMFASFLIMAGAG-ATYLFGTYSKEIKSTLGYDQTTLNLLSTCKDLG-ANVGVLSGLLAEVTPPWLV 91 (594)
Q Consensus 14 ~~~~~~~~~~~w~~~~~~~l~~~~~g-~~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~-~~~~~~~G~l~Dr~G~r~v 91 (594)
.+..+..++++|.++.+.++...... ....++...|.+.++ |+|.++.+++.+...++ .+.+++.|+++||+|||++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~ 95 (452)
T PRK11273 17 AEIDPTYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVF 95 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchh
Confidence 33333344556766555444433332 445567788999988 99999999965555554 4679999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHhhhhhhhhhhhHhHHhhcCC-CceeehhHHHHHhhhhHHHHH
Q 007665 92 LLVGSAMNFGGYFMIWLAVMKKIAKPKVWQMCLYICIGANSQNFANTGSLVTCVKNFP-ESRGMMLGLMKGFVGLSGAVF 170 (594)
Q Consensus 92 ~~~g~~l~~ig~~l~~~a~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp-~~rg~~~gi~~~~~glg~~i~ 170 (594)
++++.++.+++.++++++.. ...+++.+++.|++.|++.+..++.....+.+|+| ++|++++|+...+..+|+.+.
T Consensus 96 l~~~~~~~~i~~~~~~~~~~---~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~ 172 (452)
T PRK11273 96 LPAGLILAAAVMLFMGFVPW---ATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLP 172 (452)
T ss_pred HHHHHHHHHHHHHHHHhhhc---ccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHH
Confidence 99999998888776654311 11357778889999999999888877788899997 569999999988888887655
Q ss_pred HHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccc
Q 007665 171 TQIYLAIYGNDAKSMILLIAWLPALVSLVFVYTIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGY 250 (594)
Q Consensus 171 ~~l~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (594)
+++...... . ..+|+..|.....+.+...+
T Consensus 173 ~~l~~~~~~-----------------------~--------~~gw~~~f~i~~~~~~~~~~------------------- 202 (452)
T PRK11273 173 PLLFLLGMA-----------------------W--------FNDWHAALYMPAFAAILVAL------------------- 202 (452)
T ss_pred HHHHHHHHH-----------------------H--------hccHHHHHHHHHHHHHHHHH-------------------
Confidence 543221100 0 12677666522111110000
Q ss_pred cchhhHHHHhhhhcchhhhhhhhhhhhcCCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcC
Q 007665 251 IGSAIAVCIFVFLPLFIAFREEFAAWQQRKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCC 330 (594)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (594)
...+..+++++. ... ++. ++ .+++. . ++ .+++
T Consensus 203 -------------l~~~~~~~~~~~-~~~----~~~-----~~-------------~~~~~------~-~~--~~~~--- 234 (452)
T PRK11273 203 -------------FAFAMMRDTPQS-CGL----PPI-----EE-------------YKNDY------P-DD--YNEK--- 234 (452)
T ss_pred -------------HHHHHccCCHhh-cCC----CCh-----hh-------------hhhcc------c-cc--cccc---
Confidence 000111111100 000 000 00 00000 0 00 0000
Q ss_pred CCCCCCCCCCCCccHHHhhchHHHHHHHHHHHhhccccceeeccHHHHHHh-cCCCCCcchhhHHHHhhhhhHhhhhhcc
Q 007665 331 GNIFKPPKRGEDYGILQALLSIDMLILFLATFCGLGCSLTAIDNLGQIGES-LGYPQHTINTFVSLVSIWNYFGRVFAGF 409 (594)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~a~~~~~~~~i~~~~g~~~~g~ 409 (594)
.+++....+.-....+|++.+|...+..++.....+....++|.++++ .|++..+++....++.++..+++++.|+
T Consensus 235 ---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~ 311 (452)
T PRK11273 235 ---HEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGW 311 (452)
T ss_pred ---cCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000000000011346789999988777766655555666788999886 5899888888888999999999999999
Q ss_pred ccHHHhhhccCCchHHHHHHHHHHHHHHHHHhc--cC-cchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchh
Q 007665 410 VSEIILLKYKVPRPLIMAISLILSAVGDVLIAF--PK-PGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCG 486 (594)
Q Consensus 410 l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~--~~-~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~ 486 (594)
++||++++++ .........+..++.+.+.. .. ....++..+++|.+..........+..|.+|++.+|+++|+.
T Consensus 312 l~dr~~~~r~---~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~ 388 (452)
T PRK11273 312 MSDKVFRGNR---GATGVFFMTLVTIATIVYWLNPAGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFT 388 (452)
T ss_pred HHHHHccCCc---chHHHHHHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHH
Confidence 9999954321 11222222222233222221 11 222333344445443333333445677999999999999999
Q ss_pred hccchhhhhhhhhhHHHhhhhHHHHHhhhhhhcccccCCCcccccccchHHHHHHHHHHHHHHHHHHHHHHhhh
Q 007665 487 QLASPLGSYVLNVIVVGRLYDREAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFILVMRT 560 (594)
Q Consensus 487 ~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 560 (594)
+....+++.+.+|.+.|.+.|. .+|+..|++++++++++++....+.+.+
T Consensus 389 ~~~~~~g~~~~g~~v~g~l~~~------------------------~g~~~~f~~~~~~~~~~~~~~~~~~~~~ 438 (452)
T PRK11273 389 GLFGYLGGSVAASAIVGYTVDF------------------------FGWDGGFMVMIGGSILAVILLIVVMIGE 438 (452)
T ss_pred HHHHHHHHHHhhhhhHHHHHHH------------------------hcchHHHHHHHHHHHHHHHHHHHHhccc
Confidence 9888888765579999999998 4699999999988888877776654433
No 10
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.98 E-value=1.3e-29 Score=265.48 Aligned_cols=383 Identities=15% Similarity=0.088 Sum_probs=262.6
Q ss_pred HhhhHHHHHHHHHHHHhhh-hhhchhhhHHHHHHHhCCCHhHHHHHHHHHhhhh-hhhhhhhhhhcccCchHHHHHHHHH
Q 007665 21 LRGRWFMMFASFLIMAGAG-ATYLFGTYSKEIKSTLGYDQTTLNLLSTCKDLGA-NVGVLSGLLAEVTPPWLVLLVGSAM 98 (594)
Q Consensus 21 ~~~~w~~~~~~~l~~~~~g-~~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr~G~r~v~~~g~~l 98 (594)
++++|.++..+++..+..+ +.+.++...|.+.+++|.|+++.+++.+...++. +..++.|+++||+|||+++..+.++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 89 (406)
T PRK11551 10 SSRLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVAL 89 (406)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHH
Confidence 4588888777777777665 6778889999999999999999999766666666 5588999999999999999999988
Q ss_pred HHHHHHHHHHHHhhccCChhHHHHHHHHHHHhhhhhhhhhhhHhHHhhcCC-CceeehhHHHHHhhhhHHHHHHHHHHHH
Q 007665 99 NFGGYFMIWLAVMKKIAKPKVWQMCLYICIGANSQNFANTGSLVTCVKNFP-ESRGMMLGLMKGFVGLSGAVFTQIYLAI 177 (594)
Q Consensus 99 ~~ig~~l~~~a~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp-~~rg~~~gi~~~~~glg~~i~~~l~~~l 177 (594)
..++.+++.++ ++++.+++.|++.|++.+...+....++.|++| ++|++++|+...+..+|..+++.+...+
T Consensus 90 ~~~~~~~~~~~-------~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 162 (406)
T PRK11551 90 FGLFSLATAQA-------WDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLA 162 (406)
T ss_pred HHHHHHHHHHh-------ccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88887766544 678899999999999999998888899999997 5799999999998888888876554433
Q ss_pred hCCChHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHH
Q 007665 178 YGNDAKSMILLIAWLPALVSLVFVYTIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAV 257 (594)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (594)
.+ ..+|+..|.......+. ..+.
T Consensus 163 ~~--------------------------------~~~~~~~~~~~~~~~~~---~~~~---------------------- 185 (406)
T PRK11551 163 AG--------------------------------DAAWRHIFYVGGVGPLL---LVPL---------------------- 185 (406)
T ss_pred cc--------------------------------ccCHHHHHHHHHHHHHH---HHHH----------------------
Confidence 22 23455554411111000 0000
Q ss_pred HHhhhhcchhhhhhhhhhhhcCCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCC
Q 007665 258 CIFVFLPLFIAFREEFAAWQQRKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPP 337 (594)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (594)
.....+++++ +.+++ . . .+ .+++
T Consensus 186 -------~~~~l~~~~~-~~~~~-----~-------------------------------~-----~~--------~~~~ 208 (406)
T PRK11551 186 -------LMRWLPESRA-FAQAA-----G-------------------------------A-----GK--------QRAP 208 (406)
T ss_pred -------HHHhCCCChh-HHhcc-----C-------------------------------c-----ch--------hhhh
Confidence 0000111100 00000 0 0 00 0000
Q ss_pred CCCCCccHHHhhchHHHHHHHHHHHhhccccceeeccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhh
Q 007665 338 KRGEDYGILQALLSIDMLILFLATFCGLGCSLTAIDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLK 417 (594)
Q Consensus 338 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r 417 (594)
. .....+..+.+..+.+...+++.....+....+.|.+.++.|+++.+.+...+...++.++++++.|+++||+++|
T Consensus 209 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 285 (406)
T PRK11551 209 V---LRALFGEGRATATLLLWISYFFTLIVLYFLLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPR 285 (406)
T ss_pred h---HHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 0 0000000011222223233333323333455678888888999999999999999999999999999999999887
Q ss_pred ccCCchHHHHHHHHHHHHHHHHHhcc-CcchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhh
Q 007665 418 YKVPRPLIMAISLILSAVGDVLIAFP-KPGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYV 496 (594)
Q Consensus 418 ~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~ 496 (594)
+ .+..+.+...++++.+... +...+.+..++.|++.+...+....+..|.+|+++++++.|+.+....+++.+
T Consensus 286 ~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~ 359 (406)
T PRK11551 286 R------VVLLIYAGILASLAALAAAPSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMA 359 (406)
T ss_pred H------HHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHH
Confidence 3 3334444444444443333 33445556677788877778888899999999999999999999999999976
Q ss_pred hhhhHHHhhhhHHHHHhhhhhhcccccCCCcccccccchHHHHHHHHHHHHHHHHHHHHHH
Q 007665 497 LNVIVVGRLYDREAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFILV 557 (594)
Q Consensus 497 ~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 557 (594)
+|.+.|.++|. .++|...++....+.+++.++.+.+.
T Consensus 360 -g~~~~g~l~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (406)
T PRK11551 360 -GPLLAGQLLAL-----------------------GRSTVGVIGASIPVILVAALAALLLV 396 (406)
T ss_pred -HhhhHhhhhcc-----------------------CCchHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999987 25677777777777666666555443
No 11
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.97 E-value=1.8e-29 Score=270.47 Aligned_cols=400 Identities=15% Similarity=0.079 Sum_probs=278.2
Q ss_pred hhHHHHHHHHHHHHhh-hhhhchhhhHHHHHHHhCCCHhHHHHHHHHHhhhh-hhhhhhhhhhcccCchHHHHHHHHHHH
Q 007665 23 GRWFMMFASFLIMAGA-GATYLFGTYSKEIKSTLGYDQTTLNLLSTCKDLGA-NVGVLSGLLAEVTPPWLVLLVGSAMNF 100 (594)
Q Consensus 23 ~~w~~~~~~~l~~~~~-g~~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr~G~r~v~~~g~~l~~ 100 (594)
++|.++...++..+.. -+....+...|++.+++|.+.++.+|+.+.+.++. .+.++.|+++||+|||++++.+.+++.
T Consensus 3 ~~~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~ 82 (495)
T PRK14995 3 RQWLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFG 82 (495)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 4566655555555544 47888899999999999999999999766666665 568899999999999999999999999
Q ss_pred HHHHHHHHHHhhccCChhHHHHHHHHHHHhhhhhhhhhhhHhHHhhcC-C-CceeehhHHHHHhhhhHHHHHHHHHHHHh
Q 007665 101 GGYFMIWLAVMKKIAKPKVWQMCLYICIGANSQNFANTGSLVTCVKNF-P-ESRGMMLGLMKGFVGLSGAVFTQIYLAIY 178 (594)
Q Consensus 101 ig~~l~~~a~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~f-p-~~rg~~~gi~~~~~glg~~i~~~l~~~l~ 178 (594)
+++++++++ ++++.++++|+++|+|.+...+.....+.+++ | ++|+++.|+.....++|..++|.+.+.+.
T Consensus 83 ~~~~~~~~a-------~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~ 155 (495)
T PRK14995 83 LASLAAAFS-------PTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILL 155 (495)
T ss_pred HHHHHHHHc-------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999988765 78999999999999999998888888888887 5 57999999999999999999999999998
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHhccC-CCCC--CCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhh
Q 007665 179 GNDAKSMILLIAWLPALVSLVFVYTIRPL-KVSS--HPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAI 255 (594)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~--~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (594)
+..+|++.+++..+..+..++......+. +..+ ..++..... . ..+...+..........+ ...+....
T Consensus 156 ~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~~~~~d~~g~~~----~--~~~~~~l~~~~~~~~~~~--~~~~~~~~ 227 (495)
T PRK14995 156 EHFYWGSVFLINVPIVLVVMGLTARYVPRQAGRRDQPLNLGHALM----L--IVAILLLVYSAKTALKGF--LSLWVTSL 227 (495)
T ss_pred ccCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCChHhHHH----H--HHHHHHHHHHHHhccccC--CchHHHHH
Confidence 88888888888766555444433332222 1111 122222211 1 111111111111111111 11111111
Q ss_pred HHHHhhhhcchhhhhhhhhhhhcCCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCC
Q 007665 256 AVCIFVFLPLFIAFREEFAAWQQRKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFK 335 (594)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (594)
.+...... +..+...+. ..+
T Consensus 228 ~~~~~~~~-l~~f~~~e~-----------------------------------------------------------~~~ 247 (495)
T PRK14995 228 TLLTGALL-LGLFIRTQL-----------------------------------------------------------AAS 247 (495)
T ss_pred HHHHHHHH-HHHHHHHHh-----------------------------------------------------------cCC
Confidence 11111111 111111110 000
Q ss_pred CCCCCCCccHHHhhchHHHHHHHHHHHhhccccceeeccHHHHHHh-cCCCCCcchhhHHHHhhhhhHhhhhhccccHHH
Q 007665 336 PPKRGEDYGILQALLSIDMLILFLATFCGLGCSLTAIDNLGQIGES-LGYPQHTINTFVSLVSIWNYFGRVFAGFVSEII 414 (594)
Q Consensus 336 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~ 414 (594)
+ +....+.+|+|.++...+..++..........++|.++|. +|+|+.+++.......++..++.++.|++.||+
T Consensus 248 ~-----p~~~~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~ 322 (495)
T PRK14995 248 R-----PMIDMRLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRL 322 (495)
T ss_pred C-----CCcCHHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 0 1122678888888776666555544444555667888875 699999999999999999999999999999999
Q ss_pred hhhccCCchHHHHHHHHHHHHHHHHHhc-c--C-cchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccc
Q 007665 415 LLKYKVPRPLIMAISLILSAVGDVLIAF-P--K-PGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLAS 490 (594)
Q Consensus 415 g~r~~~~~~~~~~~~~~~~~i~~~~~~~-~--~-~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 490 (594)
++| ..+..+.++.+++..++.. . + .+..+...++.|++.|...+.....+.+..|+++++.+.++.++..
T Consensus 323 g~~------~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 396 (495)
T PRK14995 323 GLR------LVATGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAY 396 (495)
T ss_pred Cch------HHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHH
Confidence 876 3455566666666554432 1 2 2334556788899999888888888889999999999999999999
Q ss_pred hhhhhhhhhhHHHhhhhHH
Q 007665 491 PLGSYVLNVIVVGRLYDRE 509 (594)
Q Consensus 491 ~lg~~~~gp~~~g~l~~~~ 509 (594)
++|+.+ |+.+.|.+++..
T Consensus 397 ~lG~~~-G~ai~g~i~~~~ 414 (495)
T PRK14995 397 ELGAGL-GIAIFGLLLSRS 414 (495)
T ss_pred HHHHHH-HHHHHHHHHHHH
Confidence 999976 999999998754
No 12
>PRK03545 putative arabinose transporter; Provisional
Probab=99.97 E-value=3.2e-29 Score=260.96 Aligned_cols=352 Identities=11% Similarity=0.001 Sum_probs=250.4
Q ss_pred hhhchhhhHHHHHHHhCCCHhHHHHHHHHHhhh-hhhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhccCChh
Q 007665 40 ATYLFGTYSKEIKSTLGYDQTTLNLLSTCKDLG-ANVGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIAKPK 118 (594)
Q Consensus 40 ~~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~-~~~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~~~ 118 (594)
..+....+.|.+++++|.|.++.+++.+.+.++ .+.+++.|.+.||+|||+++..+.+++.+++++++++ ++
T Consensus 24 ~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-------~~ 96 (390)
T PRK03545 24 TEFVPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALA-------WN 96 (390)
T ss_pred HHHHHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHh-------cc
Confidence 344445567999999999999999965555544 4668899999999999999999999999998887665 78
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhHhHHhhcCC-CceeehhHHHHHhhhhHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHH
Q 007665 119 VWQMCLYICIGANSQNFANTGSLVTCVKNFP-ESRGMMLGLMKGFVGLSGAVFTQIYLAIYGNDAKSMILLIAWLPALVS 197 (594)
Q Consensus 119 ~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp-~~rg~~~gi~~~~~glg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 197 (594)
++.+++.|+++|++.+...+....++.+++| ++|++++|+...+.++|..+++++.+.+.+.
T Consensus 97 ~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~----------------- 159 (390)
T PRK03545 97 FTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQY----------------- 159 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHH-----------------
Confidence 9999999999999999888888889999997 5899999999999999999888766544332
Q ss_pred HHHHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHHhhhhcchhhhhhhhhhhh
Q 007665 198 LVFVYTIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCIFVFLPLFIAFREEFAAWQ 277 (594)
Q Consensus 198 l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (594)
.+||..|.....+.+...+. .....+++
T Consensus 160 ---------------~gw~~~f~~~~~~~~l~~~~--------------------------------~~~~~~~~----- 187 (390)
T PRK03545 160 ---------------LGWRTTFLAIGGGALITLLL--------------------------------LIKLLPLL----- 187 (390)
T ss_pred ---------------hcHHHHHHHHHHHHHHHHHH--------------------------------HHHhCCCC-----
Confidence 35666555221111000000 00000000
Q ss_pred cCCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCCCCCccHHHhhchHHHHHH
Q 007665 278 QRKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKRGEDYGILQALLSIDMLIL 357 (594)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 357 (594)
++ + ++ ......++.+|+|.+|..
T Consensus 188 --------~~-----~----------------------------------------~~----~~~~~~~~~~~~~~~~~~ 210 (390)
T PRK03545 188 --------PS-----E----------------------------------------HS----GSLKSLPLLFRRPALVSL 210 (390)
T ss_pred --------CC-----C----------------------------------------Cc----chHHHHHHHHhCcHHHHH
Confidence 00 0 00 000134677888888766
Q ss_pred HHHHHhhccccceeeccHHHHHHh-cCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHH
Q 007665 358 FLATFCGLGCSLTAIDNLGQIGES-LGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVG 436 (594)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~ 436 (594)
.+..++..........+.+++.++ .|+++.+++...+...+++++++++.|+++||+++| .+. .+..+..++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~------~~~-~~~~~~~~~ 283 (390)
T PRK03545 211 YLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSG------FLL-IAIALLLVC 283 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchh------HHH-HHHHHHHHH
Confidence 555444333333334455666665 689999999999999999999999999999998765 222 233333333
Q ss_pred HHHH-hcc-CcchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhh
Q 007665 437 DVLI-AFP-KPGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQL 514 (594)
Q Consensus 437 ~~~~-~~~-~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~ 514 (594)
...+ ... +...+++..++.|++.+...+.....+.+..| +++++++|+.+....+|..+ ||.+.|.++|.
T Consensus 284 ~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~-G~~~~G~~~~~------ 355 (390)
T PRK03545 284 LLLLLPAANSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGA-GALLGNQVSLH------ 355 (390)
T ss_pred HHHHHHHhchHHHHHHHHHHHHHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHH-HHHHHHHHHhc------
Confidence 3222 222 23445556778888877666667777778776 68899999998888998876 99999999988
Q ss_pred hhhhcccccCCCcccccccchHHHHHHHHHHHHHHHHHHHHHH
Q 007665 515 AEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFILV 557 (594)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 557 (594)
.+++..|.+.+++.+++.+......
T Consensus 356 ------------------~g~~~~~~~~~~~~~~~~~~~~~~~ 380 (390)
T PRK03545 356 ------------------LGLSSIGYVGAALALAALVWSILIF 380 (390)
T ss_pred ------------------cChhHHHHHHHHHHHHHHHHHHHHc
Confidence 6899999999988888887766554
No 13
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.97 E-value=6.3e-30 Score=267.62 Aligned_cols=401 Identities=12% Similarity=0.063 Sum_probs=254.3
Q ss_pred hhhHHHHHHHHHHHHhhh-hhhchhhhHHHHHHHhCCCHhHHHHHHHHHhhhh-hhhhhhhhhhcccCchHHHHHHHHHH
Q 007665 22 RGRWFMMFASFLIMAGAG-ATYLFGTYSKEIKSTLGYDQTTLNLLSTCKDLGA-NVGVLSGLLAEVTPPWLVLLVGSAMN 99 (594)
Q Consensus 22 ~~~w~~~~~~~l~~~~~g-~~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr~G~r~v~~~g~~l~ 99 (594)
|.+|..+...++...+.. +....+...|.+++|+|.|.++.+++.+.+.++. +.+++.|++.||+|||+++..+++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~ 83 (412)
T TIGR02332 4 KLFRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLW 83 (412)
T ss_pred eehhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHH
Confidence 345666665555555543 6788888999999999999999999666555554 66899999999999999999999999
Q ss_pred HHHHHHHHHHHhhccCChhHHHHHHHHHHHhhhhhhhhhhhHhHHhhcCCC-ceeehhHHHHHhhhhHHHHHHHHHHHHh
Q 007665 100 FGGYFMIWLAVMKKIAKPKVWQMCLYICIGANSQNFANTGSLVTCVKNFPE-SRGMMLGLMKGFVGLSGAVFTQIYLAIY 178 (594)
Q Consensus 100 ~ig~~l~~~a~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp~-~rg~~~gi~~~~~glg~~i~~~l~~~l~ 178 (594)
.++.++++++ ++++.+++.|++.|++.+...+....++.+|+|+ +|++++|++..+.++|..+++.+.+.+.
T Consensus 84 ~~~~~~~~~~-------~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~ 156 (412)
T TIGR02332 84 GIASTATMFA-------TGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYIL 156 (412)
T ss_pred HHHHHHHHHh-------cCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998887665 7889999999999999999988888889999984 7999999999999999999887765543
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHH
Q 007665 179 GNDAKSMILLIAWLPALVSLVFVYTIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVC 258 (594)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (594)
+.. .-....+||..|......++. ..
T Consensus 157 ~~~--------------------------~~~~~~gwr~~f~~~~~~~l~---~~------------------------- 182 (412)
T TIGR02332 157 ALD--------------------------GLMALKGWQWLFLLEGFPSVI---LG------------------------- 182 (412)
T ss_pred hCC--------------------------CCCCccchhHHHHHHHHHHHH---HH-------------------------
Confidence 210 000023566665521111100 00
Q ss_pred HhhhhcchhhhhhhhhhhhcCCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCC
Q 007665 259 IFVFLPLFIAFREEFAAWQQRKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPK 338 (594)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (594)
....++++|.++. .+. .++ ++ ++...+.. +.++. +.++ +++. ..++ +
T Consensus 183 ----~~~~~~~~~~p~~-----~~~-l~~----~~-------~~~~~~~~-~~~~~---~~~~--~~~~-----~~~~-~ 229 (412)
T TIGR02332 183 ----VMTWFWLDDSPDK-----AKW-LDE----ED-------KKALKEMI-DNDQL---TLEQ--PEGA-----FAHA-A 229 (412)
T ss_pred ----HHHhhccCCCccc-----CCC-CCH----HH-------HHHHHHHH-Hhccc---cccc--cccc-----cccc-c
Confidence 0000111111000 000 000 00 00000000 00000 0000 0000 0000 0
Q ss_pred CCCCccHHHhhchHHHHHHHHHHHhhccccceeeccHHHHHHhc--CCCCCcchhhHHHHhhhhhHhhhhhccccHHHhh
Q 007665 339 RGEDYGILQALLSIDMLILFLATFCGLGCSLTAIDNLGQIGESL--GYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILL 416 (594)
Q Consensus 339 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~ 416 (594)
......+++ ++++.+|...+.+++.......+..++|.++++. |+++.+++.......++..+|+++.|+++||+++
T Consensus 230 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~ 308 (412)
T TIGR02332 230 MPQRSMLRE-IFTPAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKE 308 (412)
T ss_pred ccHHHHHHH-hcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCc
Confidence 000012233 4468888888777777666667778999999874 6777888888999999999999999999999986
Q ss_pred hccCCchHHHHHHHHHHHHHHHHHhccCcch-HHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhh
Q 007665 417 KYKVPRPLIMAISLILSAVGDVLIAFPKPGS-VYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSY 495 (594)
Q Consensus 417 r~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ 495 (594)
|+ .......++..+++.+........ .+....+.+++.....+.......+.+|++++++++|+.+....+|++
T Consensus 309 r~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~ 383 (412)
T TIGR02332 309 RK-----HHTALPYLFAAAGWLLASATDHNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSA 383 (412)
T ss_pred cH-----HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhh
Confidence 53 222223333333332222222212 122222333333333333344456788999999999999999999997
Q ss_pred hhhhhHHHhhhhHHHHHhhhhhhcccccCCCcccccccchHHHHHHHHHHH
Q 007665 496 VLNVIVVGRLYDREAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVN 546 (594)
Q Consensus 496 ~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~ 546 (594)
+ +|.+.|.+.|. .++|+..|++.+++.
T Consensus 384 ~-~p~~~g~i~~~-----------------------~g~~~~~~~~~~~~~ 410 (412)
T TIGR02332 384 L-SPFLIGILKDA-----------------------TGSFNSGLWFVAALL 410 (412)
T ss_pred h-hhhhccccccc-----------------------CCCCchhHHHHHHHH
Confidence 6 99999999987 357999988776643
No 14
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.97 E-value=4.1e-29 Score=266.02 Aligned_cols=379 Identities=13% Similarity=0.104 Sum_probs=241.4
Q ss_pred hhhchhhhHHHHHHHhCCCHhHHHHHHHHHhhhhh-hhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhccCChh
Q 007665 40 ATYLFGTYSKEIKSTLGYDQTTLNLLSTCKDLGAN-VGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIAKPK 118 (594)
Q Consensus 40 ~~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~~~ 118 (594)
..+.++.+.|.+++++|+|..+.+++.+.+.++.. ..++.|+++||+|||+++..+.++.+++.++++++ ++
T Consensus 51 ~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~-------~s 123 (476)
T PLN00028 51 STFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLV-------SS 123 (476)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHh-------cC
Confidence 55678888999999999999999997666666664 57899999999999999999999888887766554 57
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhHhHHhhcCC-CceeehhHHHHHhhhhHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHH
Q 007665 119 VWQMCLYICIGANSQNFANTGSLVTCVKNFP-ESRGMMLGLMKGFVGLSGAVFTQIYLAIYGNDAKSMILLIAWLPALVS 197 (594)
Q Consensus 119 ~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp-~~rg~~~gi~~~~~glg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 197 (594)
+..+++.|++.|++.+.. .....++.+|+| ++||+++|+......+|+.+++.+.. .+..
T Consensus 124 ~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~------------------~i~~ 184 (476)
T PLN00028 124 ATGFIAVRFFIGFSLATF-VSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMP------------------LVFP 184 (476)
T ss_pred HHHHHHHHHHHHHHHHhh-HHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHH------------------HHHH
Confidence 888888999999998764 345567899998 57999999988776677766654331 1111
Q ss_pred HHHHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHHhhhhcchhhhhhhhhhhh
Q 007665 198 LVFVYTIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCIFVFLPLFIAFREEFAAWQ 277 (594)
Q Consensus 198 l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (594)
.+ ... ......+||..|.....+++ ++.+.. +.+.++
T Consensus 185 ~~----~~~-~~~~~~gWr~~f~i~g~l~l---~~~l~~------------------------------~~~~~~----- 221 (476)
T PLN00028 185 LI----KDA-GAPSFTAWRIAFFVPGLLHI---IMGILV------------------------------LTLGQD----- 221 (476)
T ss_pred HH----Hhc-CCcchhhhHHHHHHHHHHHH---HHHHHH------------------------------HHHcCc-----
Confidence 11 000 00012478888873222211 111000 001100
Q ss_pred cCCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCCCCCccHHHhhchHHHHHH
Q 007665 278 QRKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKRGEDYGILQALLSIDMLIL 357 (594)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 357 (594)
.++... .+ .++ + .+.++......+++.++++.+|.+
T Consensus 222 -------~p~~~~-~~-------------~~~--------~---------------~~~~~~~~~~~~~~~~~~~~~~~~ 257 (476)
T PLN00028 222 -------LPDGNY-RE-------------LKK--------S---------------GTMPKDSFSKVLRYGVTNYRTWIL 257 (476)
T ss_pred -------CCCCch-hh-------------HHh--------c---------------CccccccHHHHHHHHHcCchhHHH
Confidence 000000 00 000 0 000000001234667888998888
Q ss_pred HHHHHhhccccceeeccHHHHHHh-cCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccC-CchHHHHHHHHHHHH
Q 007665 358 FLATFCGLGCSLTAIDNLGQIGES-LGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKV-PRPLIMAISLILSAV 435 (594)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~-~~~~~~~~~~~~~~i 435 (594)
.+.+++.......+..++|.++.+ .|+++.+++.+.++..+++.++++++|+++||++||+.. .|..+..+..++..+
T Consensus 258 ~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i 337 (476)
T PLN00028 258 ALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGV 337 (476)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHH
Confidence 777665555445555667877754 699999999999999999999999999999999987432 233444444444333
Q ss_pred HHHHHhccC-cchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhh
Q 007665 436 GDVLIAFPK-PGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQL 514 (594)
Q Consensus 436 ~~~~~~~~~-~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~ 514 (594)
..+++.... .....+..++++++.+...+....+..+.. ++++|+++|+.+....+|+.+ +|.+ ++..
T Consensus 338 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~g~lg~~i-~~~l----~~~~----- 406 (476)
T PLN00028 338 FCIWLGRANSLGAAIVVMILFSIFVQAACGATFGIVPFVS-RRSLGVISGLTGAGGNVGAVL-TQLL----FFTG----- 406 (476)
T ss_pred HHHHhcccchHHHHHHHHHHHHHHHHHhhhhhcccCcccC-hhhchhhhhhhhccccHHHHH-HHHH----HHhc-----
Confidence 333333222 223333455566665555555555555554 579999999987777776654 4443 3320
Q ss_pred hhhhcccccCCCcccccccchHHHHHHHHHHHHHHHHHHHHHHh
Q 007665 515 AEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFILVM 558 (594)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 558 (594)
+..+|+..|++.+++.++++++.++++.
T Consensus 407 ----------------~~~~y~~~f~~~~~~~~i~~~~~~~~~~ 434 (476)
T PLN00028 407 ----------------SSYSTETGISLMGVMIIACTLPVAFIHF 434 (476)
T ss_pred ----------------CCccHhhHHHHHHHHHHHHHHHHHheec
Confidence 0257999999999998888887777653
No 15
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.97 E-value=2.5e-28 Score=243.20 Aligned_cols=375 Identities=17% Similarity=0.152 Sum_probs=281.9
Q ss_pred hhHHHHHHHHHHHHhhh-hhhchhhhHHHHHHHhCCCHhHHHHH-HHHHhhhhhhhhhhhhhhcccCchHHHHHHHHHHH
Q 007665 23 GRWFMMFASFLIMAGAG-ATYLFGTYSKEIKSTLGYDQTTLNLL-STCKDLGANVGVLSGLLAEVTPPWLVLLVGSAMNF 100 (594)
Q Consensus 23 ~~w~~~~~~~l~~~~~g-~~~~~~~~~~~l~~~~~~s~~~~~~~-~~~~~~~~~~~~~~G~l~Dr~G~r~v~~~g~~l~~ 100 (594)
..|..+....+..++.+ .-+......|++.+|+|+|..+.++. +.+.....+.+|+...+.||+.||++++..+.+|.
T Consensus 10 ~~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi 89 (394)
T COG2814 10 PMWLALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFI 89 (394)
T ss_pred cchHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHH
Confidence 44454444445555555 57888889999999999999999995 55544555779999999999999999999999999
Q ss_pred HHHHHHHHHHhhccCChhHHHHHHHHHHHhhhhhhhhhhhHhHHhhcCC-CceeehhHHHHHhhhhHHHHHHHHHHHHhC
Q 007665 101 GGYFMIWLAVMKKIAKPKVWQMCLYICIGANSQNFANTGSLVTCVKNFP-ESRGMMLGLMKGFVGLSGAVFTQIYLAIYG 179 (594)
Q Consensus 101 ig~~l~~~a~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp-~~rg~~~gi~~~~~glg~~i~~~l~~~l~~ 179 (594)
++.++++++ +||+.+++.|++.|+..|..++.+..+..+..| +||+++++++..+..++..++.|+++++-+
T Consensus 90 ~~n~l~alA-------p~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~ 162 (394)
T COG2814 90 VSNLLSALA-------PSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQ 162 (394)
T ss_pred HHHHHHHHh-------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 999999888 899999999999999999999999999999996 689999999999999999999988876543
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHH
Q 007665 180 NDAKSMILLIAWLPALVSLVFVYTIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCI 259 (594)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (594)
..+||..|.....+++...+++..
T Consensus 163 --------------------------------~~GWR~~F~~ia~l~ll~~~~~~~------------------------ 186 (394)
T COG2814 163 --------------------------------LFGWRATFLAIAVLALLALLLLWK------------------------ 186 (394)
T ss_pred --------------------------------HhhHHHHHHHHHHHHHHHHHHHHH------------------------
Confidence 237888877433332221111100
Q ss_pred hhhhcchhhhhhhhhhhhcCCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCC
Q 007665 260 FVFLPLFIAFREEFAAWQQRKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKR 339 (594)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (594)
.+| |++ ..+++.
T Consensus 187 --~lP--------------------~~~----------------------------------------------~~~~~~ 198 (394)
T COG2814 187 --LLP--------------------PSE----------------------------------------------ISGSLP 198 (394)
T ss_pred --hCC--------------------Ccc----------------------------------------------CCCCCC
Confidence 000 000 000000
Q ss_pred CCCccHHHhhchHHHHHHHHHHHhhccccceeeccHHHHHHhc-CCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhc
Q 007665 340 GEDYGILQALLSIDMLILFLATFCGLGCSLTAIDNLGQIGESL-GYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKY 418 (594)
Q Consensus 340 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~ 418 (594)
.+..+..+++|+|..|...+..++.+...+..+.++.+++++. |+|....++.+.+++++..+|+.++|++.|| +.|
T Consensus 199 ~~~~~~~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~- 276 (394)
T COG2814 199 GPLRTLLRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPR- 276 (394)
T ss_pred cchhHHHHHhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cch-
Confidence 1112347889999999999998888888888888887777764 8999999999999999999999999999999 544
Q ss_pred cCCchHHHHHHHHHHHHHHHHHhcc-C-cchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhh
Q 007665 419 KVPRPLIMAISLILSAVGDVLIAFP-K-PGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYV 496 (594)
Q Consensus 419 ~~~~~~~~~~~~~~~~i~~~~~~~~-~-~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~ 496 (594)
..+.....+..+.++.+... + .+...+..++.|+.............++ ..++....+.++.....++|..+
T Consensus 277 -----~~l~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~ 350 (394)
T COG2814 277 -----RALIAALLLLALALLALTFTGASPALALALLFLWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIAL 350 (394)
T ss_pred -----hHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHH
Confidence 23444445555554444432 2 3344444555676666555555555555 33599999999999999999986
Q ss_pred hhhhHHHhhhhHHHHHhhhhhhcccccCCCcccccccchHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 007665 497 LNVIVVGRLYDREAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFILVMRTR 561 (594)
Q Consensus 497 ~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~ 561 (594)
|..+.|.++|+ .+|....++.+.+.+++.++.+...++.|
T Consensus 351 -GA~lGG~v~~~------------------------~g~~~~~~~~a~l~~~a~~~~~~~~~~~~ 390 (394)
T COG2814 351 -GAALGGLVLDA------------------------LGYAATGWVGAALLLLALLLALLSARKDR 390 (394)
T ss_pred -HHHHHHHHHHh------------------------hchHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 99999999998 68999999999998888887766654443
No 16
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.97 E-value=1.3e-28 Score=259.64 Aligned_cols=358 Identities=16% Similarity=0.110 Sum_probs=239.8
Q ss_pred hhhHHHHHHHHHHHHhhh-hhhchhhhHHHHHHHhCCCHhHHHHHHHHHhhhh-hhhhhhhhhhcccCchHHHHHHHHHH
Q 007665 22 RGRWFMMFASFLIMAGAG-ATYLFGTYSKEIKSTLGYDQTTLNLLSTCKDLGA-NVGVLSGLLAEVTPPWLVLLVGSAMN 99 (594)
Q Consensus 22 ~~~w~~~~~~~l~~~~~g-~~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr~G~r~v~~~g~~l~ 99 (594)
+.+|..+....+..+..+ ..+......|.+++++|+|+.+.+++.+...++. +.+++.|+++||+|||+++.++.++.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~ 93 (426)
T PRK12307 14 RPQKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAY 93 (426)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHH
Confidence 344554455555555554 4556677889999999999999999766666666 55889999999999999999999999
Q ss_pred HHHHHHHHHHHhhccCChhHHHHHHHHHHHhhhhhhhhhhhHhHHhhcCC-CceeehhHHHHHhhhhHHHHHHHHHHHHh
Q 007665 100 FGGYFMIWLAVMKKIAKPKVWQMCLYICIGANSQNFANTGSLVTCVKNFP-ESRGMMLGLMKGFVGLSGAVFTQIYLAIY 178 (594)
Q Consensus 100 ~ig~~l~~~a~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp-~~rg~~~gi~~~~~glg~~i~~~l~~~l~ 178 (594)
.++.++++++ ++++.++++|+++|+|.+..++....++.|++| ++|+++.|+...+.++|..+++.+...+.
T Consensus 94 ~~~~~~~~~~-------~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~ 166 (426)
T PRK12307 94 SVGTGLSGLA-------SGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFA 166 (426)
T ss_pred HHHHHHHHHH-------hHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHc
Confidence 9998887665 688999999999999999999999999999998 56999999999999999988876665544
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHH
Q 007665 179 GNDAKSMILLIAWLPALVSLVFVYTIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVC 258 (594)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (594)
+.. +||..|...... .+..
T Consensus 167 ~~~--------------------------------~w~~~f~i~~~~----~~~~------------------------- 185 (426)
T PRK12307 167 EAY--------------------------------GWRAAFFVGLLP----VLLV------------------------- 185 (426)
T ss_pred ccC--------------------------------CHHHHHHHHHHH----HHHH-------------------------
Confidence 333 455444310000 0000
Q ss_pred Hhhhhcchhhhhh---hhhhhhcCCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCC
Q 007665 259 IFVFLPLFIAFRE---EFAAWQQRKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFK 335 (594)
Q Consensus 259 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (594)
+.++. +..++.+++ . + ++ + + . .+
T Consensus 186 --------~~~~~~~p~~~~~~~~~------------~----------------~-~~----~-~---~---------~~ 211 (426)
T PRK12307 186 --------IYIRARAPESKEWEEAK------------L----------------S-GK----G-K---H---------SQ 211 (426)
T ss_pred --------HHHHHHCCCChHHHHhh------------h----------------h-cc----c-c---c---------cc
Confidence 00000 000000000 0 0 00 0 0 0 00
Q ss_pred CCCCCCCccHHHhhchHHHHHHHHH---HHhhccccceeeccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccH
Q 007665 336 PPKRGEDYGILQALLSIDMLILFLA---TFCGLGCSLTAIDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSE 412 (594)
Q Consensus 336 ~~~~~~~~~~~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~d 412 (594)
..........++.++++.++..... .++..+..+.+..++|.+.++.|+++.+.+...+...+++.+++++.|++.|
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~d 291 (426)
T PRK12307 212 SAWSVFSLSMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCAD 291 (426)
T ss_pred cchhhhhHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000011245677888877654332 2222222233455778888888999888898899999999999999999999
Q ss_pred HHhhhccCCchHHHHHHHHHHHHHHHHHh-ccCcchHHHHHHHHHHHh--hhhHHHHHHHHHHhccCCccccccchhhcc
Q 007665 413 IILLKYKVPRPLIMAISLILSAVGDVLIA-FPKPGSVYVASLLVGFSY--GAQLTLLFIIISELFGLKYYSTLFNCGQLA 489 (594)
Q Consensus 413 r~g~r~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~l~G~~~--g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 489 (594)
|++||+ .+..+.++..+..+.+. ........+..+++|.+. .+..+..+.++.|.+|++++|++.|+.+..
T Consensus 292 r~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~ 365 (426)
T PRK12307 292 RIGLKK------TFSIGLLMSFLFIFPLFRIPQDNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNL 365 (426)
T ss_pred HhccHH------HHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHH
Confidence 998773 44445444444433332 222222223333444432 233456778889999999999999999999
Q ss_pred chhhhhhhhhhHHHhhhhH
Q 007665 490 SPLGSYVLNVIVVGRLYDR 508 (594)
Q Consensus 490 ~~lg~~~~gp~~~g~l~~~ 508 (594)
..+++.+ +|.+.|.+.|.
T Consensus 366 ~~~~~~~-gp~~~g~l~~~ 383 (426)
T PRK12307 366 AATSGTF-NSMAATWLGIT 383 (426)
T ss_pred HhHHHHH-HHHHHHHHHHc
Confidence 9999875 99999999887
No 17
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.97 E-value=1.7e-28 Score=251.78 Aligned_cols=354 Identities=13% Similarity=0.024 Sum_probs=236.0
Q ss_pred hhhchhhhHHHHHHHhCCCHhHHHHHHHHHhhhh-hhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhccCChh
Q 007665 40 ATYLFGTYSKEIKSTLGYDQTTLNLLSTCKDLGA-NVGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIAKPK 118 (594)
Q Consensus 40 ~~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~~~ 118 (594)
....++...|.+++|+|+|.++.+++.+.+.++. +.+++.|+++||+|||++++.+.+.+..+.+.. . . .++
T Consensus 6 ~~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~-~-----~-~~~ 78 (368)
T TIGR00903 6 IWVTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRL-L-----D-PFN 78 (368)
T ss_pred HHHHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHH-H-----H-hcc
Confidence 3456888999999999999999999766655655 668899999999999988765555444432211 1 1 147
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhHhHHhhcCC-CceeehhHHHHHhhhhHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHH
Q 007665 119 VWQMCLYICIGANSQNFANTGSLVTCVKNFP-ESRGMMLGLMKGFVGLSGAVFTQIYLAIYGNDAKSMILLIAWLPALVS 197 (594)
Q Consensus 119 ~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp-~~rg~~~gi~~~~~glg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 197 (594)
+..+++.|+++|+|.+. .......+.+|+| ++|++++++...+..+|..+++.+...+.+
T Consensus 79 ~~~l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~------------------ 139 (368)
T TIGR00903 79 YEWLLACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYT------------------ 139 (368)
T ss_pred HHHHHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------
Confidence 89999999999999986 4566666789997 679999999999999999998766554433
Q ss_pred HHHHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHHhhhhcchhhhhhhhhhhh
Q 007665 198 LVFVYTIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCIFVFLPLFIAFREEFAAWQ 277 (594)
Q Consensus 198 l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (594)
..+||..|.....++++..+.. .+.++|. +++
T Consensus 140 --------------~~gWr~~f~~~~~l~~~~~~~~--------------------------------~~~lp~~-p~~- 171 (368)
T TIGR00903 140 --------------AGGLQLLIIPIAAVAAAGIILV--------------------------------LAALPAL-PFQ- 171 (368)
T ss_pred --------------ccchHHHHHHHHHHHHHHHHHH--------------------------------HHHcCCC-CCC-
Confidence 2366665552211111100000 0011110 000
Q ss_pred cCCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCCCCCccHHHhhchHHHHHH
Q 007665 278 QRKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKRGEDYGILQALLSIDMLIL 357 (594)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 357 (594)
++ + ..+.++ ....+++++|+|.+|.+
T Consensus 172 -------~~-------------------------------~--------------~~~~~~--~~~~~~~ll~~~~~~~~ 197 (368)
T TIGR00903 172 -------AA-------------------------------E--------------GFGFKD--AVKEFGALAGRKDLWII 197 (368)
T ss_pred -------CC-------------------------------C--------------CcchHH--HHHHHHHHHcChhHHHH
Confidence 00 0 000000 00135788999999999
Q ss_pred HHHHHhhccccceeeccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHH
Q 007665 358 FLATFCGLGCSLTAIDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGD 437 (594)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~ 437 (594)
.+.+++.....+.+..|+|+++++.|++.. ++...++..+.+.++ .++++||..||. .|........++.++..
T Consensus 198 ~~~~~~~~~~~~~~~~wlp~~L~~~g~s~~-~~~~~~l~~~~g~~g---~~~~~d~~~r~~--~r~~~~~~~~~~~a~~~ 271 (368)
T TIGR00903 198 GAILGFGVALFDNLAIWLEAALRPAGLEDI-AGDAVALAILAGLIG---VAVIPDRVARAG--LRSIYIRAAALLIAAFF 271 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCChH-HHHHHHHHHHHHHHH---HHHhhHHhhhhh--hHHHHHHHHHHHHHHHH
Confidence 998888888888888999999998888754 555555555555554 588999987652 12222222333333333
Q ss_pred HHHhccC-cchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhh
Q 007665 438 VLIAFPK-PGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAE 516 (594)
Q Consensus 438 ~~~~~~~-~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~ 516 (594)
..+.... .........+.+++....++....+.+|.+|++.+|++.|+.+....+++.+ +|.+.+.+..
T Consensus 272 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~-~~~~~~~~~~--------- 341 (368)
T TIGR00903 272 LALAFELNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVA-LALAAMLFIS--------- 341 (368)
T ss_pred HHHHHccccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHH-HHHHHHHHhc---------
Confidence 3333222 3333444556677777777778889999999999999999999999999965 7888877662
Q ss_pred hhcccccCCCcccccccchHHHHHHHHHHHHHHHHHHH
Q 007665 517 KGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITF 554 (594)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 554 (594)
+....|.+.++..+++++...
T Consensus 342 -----------------~~~~~f~~~~~~~~i~~~~~~ 362 (368)
T TIGR00903 342 -----------------SAEAYFTFLAILITIAFAIAL 362 (368)
T ss_pred -----------------CHHHHHHHHHHHHHHHHHHHH
Confidence 256677777777777776653
No 18
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.97 E-value=8.8e-29 Score=270.20 Aligned_cols=150 Identities=17% Similarity=0.100 Sum_probs=125.9
Q ss_pred hhhHHHHHHHHHHHHhhh-hhhchhhhHHHHHHHhCCCHhHHHHHHHHHhhhh-hhhhhhhhhhcccCchHHHHHHHHHH
Q 007665 22 RGRWFMMFASFLIMAGAG-ATYLFGTYSKEIKSTLGYDQTTLNLLSTCKDLGA-NVGVLSGLLAEVTPPWLVLLVGSAMN 99 (594)
Q Consensus 22 ~~~w~~~~~~~l~~~~~g-~~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr~G~r~v~~~g~~l~ 99 (594)
+.+|.+++...+..+..+ .....+...|.++++++++..+.+++.+...++. +..+++|+++||+|||++++++++++
T Consensus 163 ~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~ 242 (742)
T TIGR01299 163 RFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVN 242 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 456766655555555555 4567788899999999999999999776666776 45889999999999999999999999
Q ss_pred HHHHHHHHHHHhhccCChhHHHHHHHHHHHhhhhhhhhhhhHhHHhhcCC-CceeehhHHHHHhhhhHHHHHHHHHHHHh
Q 007665 100 FGGYFMIWLAVMKKIAKPKVWQMCLYICIGANSQNFANTGSLVTCVKNFP-ESRGMMLGLMKGFVGLSGAVFTQIYLAIY 178 (594)
Q Consensus 100 ~ig~~l~~~a~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp-~~rg~~~gi~~~~~glg~~i~~~l~~~l~ 178 (594)
+++.++++++ ++++.++++|++.|+|.+...+....++.+++| ++||++++++..++.+|.++++.+...+.
T Consensus 243 ~i~~ll~afa-------~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il 315 (742)
T TIGR01299 243 GFFAFFSSFV-------QGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAII 315 (742)
T ss_pred HHHHHHHHHH-------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9888877655 688999999999999999999999999999998 57999999999999999988887765554
No 19
>PRK03699 putative transporter; Provisional
Probab=99.97 E-value=6.8e-28 Score=251.23 Aligned_cols=377 Identities=16% Similarity=0.141 Sum_probs=259.6
Q ss_pred hhHHHHHHHHHHHHhhh-hhhchhhhHHHHHHHhCCCHhHHHHHHHHHhhhh-hhhhhhhhhhcccCchHHHHHHHHHHH
Q 007665 23 GRWFMMFASFLIMAGAG-ATYLFGTYSKEIKSTLGYDQTTLNLLSTCKDLGA-NVGVLSGLLAEVTPPWLVLLVGSAMNF 100 (594)
Q Consensus 23 ~~w~~~~~~~l~~~~~g-~~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr~G~r~v~~~g~~l~~ 100 (594)
+||+....+++..+..+ ....++...|++++++|+|.++.+++.+...++. +..++.|++.||+|||+++..+.++..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~ 83 (394)
T PRK03699 4 NRIKLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMI 83 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 44554444444555444 5678899999999999999999999666656665 558899999999999999999999988
Q ss_pred HHHHHHHHHHhhccCChhHHHHHHHHHHHhhhhhhhhhhhHhHHhhcCCC-ceeehhHHHHHhhhhHHHHHHHHHHHHhC
Q 007665 101 GGYFMIWLAVMKKIAKPKVWQMCLYICIGANSQNFANTGSLVTCVKNFPE-SRGMMLGLMKGFVGLSGAVFTQIYLAIYG 179 (594)
Q Consensus 101 ig~~l~~~a~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp~-~rg~~~gi~~~~~glg~~i~~~l~~~l~~ 179 (594)
++.+++.++ ++++.+++.|+++|++.+...+.....+.+++|+ +|++++++.....++|+.+++.+.+.+..
T Consensus 84 i~~~l~~~~-------~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 156 (394)
T PRK03699 84 LAVAGLMFS-------HSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLA 156 (394)
T ss_pred HHHHHHHHc-------chHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 888777554 6788889999999999998888888889999984 69999999888888888887765544332
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHH
Q 007665 180 NDAKSMILLIAWLPALVSLVFVYTIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCI 259 (594)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (594)
. ..+||..|.....+.+...++
T Consensus 157 ~-------------------------------~~gw~~~f~~~~~~~~~~~~~--------------------------- 178 (394)
T PRK03699 157 R-------------------------------SIEWYWVYACIGLVYVAIFIL--------------------------- 178 (394)
T ss_pred c-------------------------------cccHHHHHHHHHHHHHHHHHH---------------------------
Confidence 1 236666665221111000000
Q ss_pred hhhhcchhhhhhhhhhhhcCCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCC
Q 007665 260 FVFLPLFIAFREEFAAWQQRKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKR 339 (594)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (594)
.+ ..+.+ +++ + ++ +++ ..+. .
T Consensus 179 ------~~-~~~~p----------~~~------~------------------------~~----~~~------~~~~-~- 199 (394)
T PRK03699 179 ------TL-FSEFP----------ALG------K------------------------HA----PKA------DKPV-A- 199 (394)
T ss_pred ------HH-hcCCc----------ccc------c------------------------cC----ccc------cCcc-c-
Confidence 00 00000 000 0 00 000 0000 0
Q ss_pred CCCccHHHhhchHHHHHHHHHHHhhccccceeeccHHHHHH-hcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhc
Q 007665 340 GEDYGILQALLSIDMLILFLATFCGLGCSLTAIDNLGQIGE-SLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKY 418 (594)
Q Consensus 340 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~ 418 (594)
+ ...++.+|.+.+..++.......+..+.|.+.+ ..|+|+.+++...+.+.++..+|+++.|+++||+++|+
T Consensus 200 ------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~ 272 (394)
T PRK03699 200 ------K-EKWGIGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQR 272 (394)
T ss_pred ------c-ccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhh
Confidence 0 011345566665555554444556678898886 46999999999999999999999999999999998873
Q ss_pred cCCchHHHHHHHHHHHHHHHHHhcc-CcchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhh
Q 007665 419 KVPRPLIMAISLILSAVGDVLIAFP-KPGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVL 497 (594)
Q Consensus 419 ~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~ 497 (594)
.+.....+.++...++... +.....+..++.|++.+..++...+...+..+ +++++..|.......+|+.+
T Consensus 273 ------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i- 344 (394)
T PRK03699 273 ------ILTVLAGLALVLMYLFVNTDDPSHLLYAILGLGFFSSAIYTTIITLGSQQTK-VASPKLVNFILTCGTIGTML- 344 (394)
T ss_pred ------HHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHH-
Confidence 2333333334433333332 33444556677888888888887777777665 55678888888888899876
Q ss_pred hhhHHHhhhhHHHHHhhhhhhcccccCCCcccccccchHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 007665 498 NVIVVGRLYDREAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFILVMRTRR 562 (594)
Q Consensus 498 gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 562 (594)
+|.+.|.+.|. .+++..+++.+++++++.+....+.+-.|+
T Consensus 345 ~p~~~G~l~~~------------------------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (394)
T PRK03699 345 TFVVTSPIVAH------------------------FGLQAALLTANGLYAVVFVMCILLGFVSKH 385 (394)
T ss_pred HHHHHHHHHHH------------------------hCchhhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999987 568889998888888887776666554444
No 20
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.97 E-value=4.7e-28 Score=255.44 Aligned_cols=388 Identities=12% Similarity=-0.055 Sum_probs=231.9
Q ss_pred hhHHHHHHHHHHHHhh-hhhhchhhhHHHHHHHhC---CCHhHHHHH---HHHHhhhh-hhhhhhhhhhcccCchHHHHH
Q 007665 23 GRWFMMFASFLIMAGA-GATYLFGTYSKEIKSTLG---YDQTTLNLL---STCKDLGA-NVGVLSGLLAEVTPPWLVLLV 94 (594)
Q Consensus 23 ~~w~~~~~~~l~~~~~-g~~~~~~~~~~~l~~~~~---~s~~~~~~~---~~~~~~~~-~~~~~~G~l~Dr~G~r~v~~~ 94 (594)
++|..+..+.+..+.. -+.+.++...|.+.++++ .+..+.+.. .....++. +.++++|+++||+|||+++.+
T Consensus 19 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~ 98 (432)
T PRK10406 19 RRIWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLI 98 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHH
Confidence 4555544444444444 477789999999999985 555554332 22222333 558899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhc-cCChhHHHHHHHHHHHhhhhhhhhhhhHhHHhhcCC-CceeehhHHHHHhhhhHHHHHHH
Q 007665 95 GSAMNFGGYFMIWLAVMKK-IAKPKVWQMCLYICIGANSQNFANTGSLVTCVKNFP-ESRGMMLGLMKGFVGLSGAVFTQ 172 (594)
Q Consensus 95 g~~l~~ig~~l~~~a~~~~-~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp-~~rg~~~gi~~~~~glg~~i~~~ 172 (594)
+.+++++++++++++.+.. ....++..++++|+++|+|.|..++...+++.|++| ++||++.++...+...|..+++.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~ 178 (432)
T PRK10406 99 SVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALL 178 (432)
T ss_pred HHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHH
Confidence 9999999998876541000 000123467889999999999999999999999997 67999998877766555555432
Q ss_pred HHHHHhCCChHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccc
Q 007665 173 IYLAIYGNDAKSMILLIAWLPALVSLVFVYTIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIG 252 (594)
Q Consensus 173 l~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (594)
+...+. . .+. .......+||..|...... ++..+
T Consensus 179 ~~~~~~------------------~-----~~~-~~~~~~~gWr~~F~i~~~~----~ll~~------------------ 212 (432)
T PRK10406 179 VVVVLQ------------------Q-----TLE-DAELREWGWRIPFALGAVL----AVVAL------------------ 212 (432)
T ss_pred HHHHHH------------------H-----hCC-HHHHhccchHHHHHHHHHH----HHHHH------------------
Confidence 221100 0 000 0000134788877621111 00000
Q ss_pred hhhHHHHhhhhcchhhhhhhhhhhhcCCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCC
Q 007665 253 SAIAVCIFVFLPLFIAFREEFAAWQQRKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGN 332 (594)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (594)
.++.. .+ +.++ .+ .
T Consensus 213 ---------------~~~~~-----~~----e~~~----~~------------------------~-------------- 226 (432)
T PRK10406 213 ---------------WLRRQ-----LD----ETSQ----QE------------------------T-------------- 226 (432)
T ss_pred ---------------HHHhc-----CC----CCch----HH------------------------H--------------
Confidence 00000 00 0000 00 0
Q ss_pred CCCCCCCCCCccHHHhhchHHHHHHHHHHHhh-ccccceeeccHHHHHHh-cCCCCCcchhhHHHHhhhhhHhhhhhccc
Q 007665 333 IFKPPKRGEDYGILQALLSIDMLILFLATFCG-LGCSLTAIDNLGQIGES-LGYPQHTINTFVSLVSIWNYFGRVFAGFV 410 (594)
Q Consensus 333 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~g~s~~~a~~~~~~~~i~~~~g~~~~g~l 410 (594)
...+ +..++++++|++.+|...+..++. ....+.+..++|.++++ .|++..+++...++..++..++.++.|++
T Consensus 227 ~~~~----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l 302 (432)
T PRK10406 227 RALK----EAGSLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGAL 302 (432)
T ss_pred hhhc----ccccHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000 012357788888888765554432 33344566778888764 69988888888888888888999999999
Q ss_pred cHHHhhhccCCchHHHHHHHHHHHHHHH-HH--hc-cCcchH-HHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccch
Q 007665 411 SEIILLKYKVPRPLIMAISLILSAVGDV-LI--AF-PKPGSV-YVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNC 485 (594)
Q Consensus 411 ~dr~g~r~~~~~~~~~~~~~~~~~i~~~-~~--~~-~~~~~~-~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~ 485 (594)
+||++||+ . +..+.++.++... .. .. .+.... .....+.+++.+...+..+.+.+|.||+++|++++|+
T Consensus 303 ~Dr~grr~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~ 376 (432)
T PRK10406 303 SDKIGRRT-----S-MLCFGSLAALFTVPILSALQNVSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGL 376 (432)
T ss_pred HHHcCchH-----H-HHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhH
Confidence 99998874 2 2222222222111 11 11 111121 1122222334444445667788999999999999999
Q ss_pred hhccchh-hhhhhhhhHHHhhhhHHHHHhhhhhhcccccCCCcccccccchHHHHHHHHHHHHHHHHHHHHHH
Q 007665 486 GQLASPL-GSYVLNVIVVGRLYDREAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFILV 557 (594)
Q Consensus 486 ~~~~~~l-g~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 557 (594)
.+...++ .+.. .|.+.+. .+. .+.|...+++.+++.+++++..+++.
T Consensus 377 ~~~~g~~~~g~~-~p~~~~~-l~~-----------------------~g~~~~~~~~~~~~~~i~~~~~~~l~ 424 (432)
T PRK10406 377 SYAVANALFGGS-AEYVALS-LKS-----------------------IGMETAFFWYVTLMAVVAFLVSLMLH 424 (432)
T ss_pred HHHHHHHHHHhH-HHHHHHH-HHH-----------------------hCCCcHHHHHHHHHHHHHHHHHHHhh
Confidence 9876554 2333 6766664 454 24577777777777777766665543
No 21
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.97 E-value=8.5e-28 Score=248.17 Aligned_cols=386 Identities=13% Similarity=0.142 Sum_probs=250.4
Q ss_pred HHHHHHHHHHH-HhhhhhhchhhhHHHHHH-HhCCCHhHHHHH-HHHHhhhhhhhhhhhhhhcccCchHHHHHHHHHHHH
Q 007665 25 WFMMFASFLIM-AGAGATYLFGTYSKEIKS-TLGYDQTTLNLL-STCKDLGANVGVLSGLLAEVTPPWLVLLVGSAMNFG 101 (594)
Q Consensus 25 w~~~~~~~l~~-~~~g~~~~~~~~~~~l~~-~~~~s~~~~~~~-~~~~~~~~~~~~~~G~l~Dr~G~r~v~~~g~~l~~i 101 (594)
|..+..+.+.. .+....+.+++..+.+.+ ++|+|.+|.+++ +.....+.+..++.|++.||+|+|+++.+++++..+
T Consensus 33 ~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i 112 (462)
T PRK15034 33 RRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILII 112 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHH
Confidence 34444444433 334467788988888866 899999999995 455556667788999999999999999999999998
Q ss_pred HHHHHHHHHhhccCChhHHHHHHHHHHHhhhhhhhhhhhHhHHhhcCCC-ceeehhHHHHHhhhhHHHHHHHHHHHHhCC
Q 007665 102 GYFMIWLAVMKKIAKPKVWQMCLYICIGANSQNFANTGSLVTCVKNFPE-SRGMMLGLMKGFVGLSGAVFTQIYLAIYGN 180 (594)
Q Consensus 102 g~~l~~~a~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp~-~rg~~~gi~~~~~glg~~i~~~l~~~l~~~ 180 (594)
.++..+++..... +++..+++.|++.|++ +..+++....+++|||+ +||+++|+..+...+|..+...+.
T Consensus 113 ~~~~~~~a~~~~~--~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~------ 183 (462)
T PRK15034 113 PCVWLGIAVQNPN--TPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVA------ 183 (462)
T ss_pred HHHHHHHHHcccC--CCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHH------
Confidence 8887765422222 5799999999999998 66888899999999985 699999998766567766655433
Q ss_pred ChHHHHHHHHHHHHHHHH--HHHHHhccCCC--CCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhH
Q 007665 181 DAKSMILLIAWLPALVSL--VFVYTIRPLKV--SSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIA 256 (594)
Q Consensus 181 ~~~~~~~~~~~~~~~~~l--~~~~~~~~~~~--~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (594)
|.++.+ +...-.+..+. ....+|+.....+..+.++.++.
T Consensus 184 ------------p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~------------------------ 227 (462)
T PRK15034 184 ------------PLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIA------------------------ 227 (462)
T ss_pred ------------HHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHH------------------------
Confidence 222111 11100000000 00123444443222221111100
Q ss_pred HHHhhhhcchhhhhhhhhhhhcCCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCC
Q 007665 257 VCIFVFLPLFIAFREEFAAWQQRKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKP 336 (594)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (594)
.++..++ ++ +
T Consensus 228 ---------~~~~~~~------------~~------------------------------------------------~- 237 (462)
T PRK15034 228 ---------AWSGMND------------IA------------------------------------------------S- 237 (462)
T ss_pred ---------HHHhCCC------------cc------------------------------------------------c-
Confidence 0111100 00 0
Q ss_pred CCCCCCccHHHhhchHHHHHHHHHHHhhccccceeeccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhh
Q 007665 337 PKRGEDYGILQALLSIDMLILFLATFCGLGCSLTAIDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILL 416 (594)
Q Consensus 337 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~ 416 (594)
++......++.+|+|+.|.+.+.+++.++.+..+.+++|++.++ .++.........+..+...+.++++|+++||+|+
T Consensus 238 -~~~~~~~~~~vlk~~~~Wllslly~~tFG~fvg~s~~lp~~~~~-~~~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~ 315 (462)
T PRK15034 238 -SRASIADQLPVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKT-QFPDVNILRLAFFGPFIGAIARSVGGAISDKFGG 315 (462)
T ss_pred -cccCHHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH-HcChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCc
Confidence 00011234678999999999999999888888787788988876 4443333333445678899999999999999998
Q ss_pred hccCCchHHHHHHHHHHHHHHHH--HhccC----c-chHHHH----HHHHHHHhhhhHHHHHHHHHHhccC---------
Q 007665 417 KYKVPRPLIMAISLILSAVGDVL--IAFPK----P-GSVYVA----SLLVGFSYGAQLTLLFIIISELFGL--------- 476 (594)
Q Consensus 417 r~~~~~~~~~~~~~~~~~i~~~~--~~~~~----~-~~~~~~----~~l~G~~~g~~~~~~~~~~~~~~~~--------- 476 (594)
|+ .+.++++.+.+..+. +..+. + ....+. .+..|+|.|..| .++.++||+
T Consensus 316 ~~------vl~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvf----k~ip~~f~~~~~~~~~~~ 385 (462)
T PRK15034 316 VR------VTLINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTF----QMIAVIFRQITIYRVKMK 385 (462)
T ss_pred hH------HHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHH----HhhHHHHhhhhhhccccc
Confidence 73 334444433333221 11221 1 112222 233345555444 444445542
Q ss_pred ------------CccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhhcccccCCCcccccccchHHHHHHHHH
Q 007665 477 ------------KYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAG 544 (594)
Q Consensus 477 ------------~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~ 544 (594)
++.|.+.|++.....+|+++ -|.+.|..++. +++|...|+.+.+
T Consensus 386 ~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~-~p~~~g~~~~~-----------------------~g~~~~~~~~~~~ 441 (462)
T PRK15034 386 GGSDEQAQREAVTETAAALGFISAIGAVGGFF-IPQAFGMSLNM-----------------------TGSPVGAMKVFLI 441 (462)
T ss_pred ccchhHHhhHHHHHHHHHHHHHHHHHHcccch-hhHHHHHHHHH-----------------------cCCcHHHHHHHHH
Confidence 26788899999999999987 58899999887 5789999999999
Q ss_pred HHHHHHHHHHHHHhhhh
Q 007665 545 VNIFGALITFILVMRTR 561 (594)
Q Consensus 545 ~~~~~~~~~~~~~~~~~ 561 (594)
..+++.++.+..+.|+.
T Consensus 442 ~~~~~~~~~w~~y~r~~ 458 (462)
T PRK15034 442 FYIVCVLLTWLVYGRRK 458 (462)
T ss_pred HHHHHHHHHHHHhccCC
Confidence 99999999998876553
No 22
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.97 E-value=2.8e-28 Score=253.77 Aligned_cols=384 Identities=14% Similarity=0.029 Sum_probs=255.6
Q ss_pred hhhchhhhHHHHHHHhCCCHhHHHHHHHHHhhhh-hhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhccCChh
Q 007665 40 ATYLFGTYSKEIKSTLGYDQTTLNLLSTCKDLGA-NVGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIAKPK 118 (594)
Q Consensus 40 ~~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~~~ 118 (594)
+.+.++...|.+++++|.|..+.+++.+...++. +..++.|+++||+|||+++.++.++..++.++++++ ++
T Consensus 9 ~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~-------~~ 81 (399)
T TIGR00893 9 DRANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFA-------GA 81 (399)
T ss_pred HHHhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHH-------cC
Confidence 4567788889999999999999999766666665 568899999999999999999999998888877655 67
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhHhHHhhcCC-CceeehhHHHHHhhhhHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHH
Q 007665 119 VWQMCLYICIGANSQNFANTGSLVTCVKNFP-ESRGMMLGLMKGFVGLSGAVFTQIYLAIYGNDAKSMILLIAWLPALVS 197 (594)
Q Consensus 119 ~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp-~~rg~~~gi~~~~~glg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 197 (594)
++.+++.|++.|++.+...+....++.|++| ++|++++|+.....++|..+++.+.+.+.+..
T Consensus 82 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~---------------- 145 (399)
T TIGR00893 82 YVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHF---------------- 145 (399)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhC----------------
Confidence 8999999999999999999999999999998 57999999999999999999887766544432
Q ss_pred HHHHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHHhhhhcchhhhhhhhhhhh
Q 007665 198 LVFVYTIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCIFVFLPLFIAFREEFAAWQ 277 (594)
Q Consensus 198 l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (594)
+|+..|.......+...+. .....+++++
T Consensus 146 ----------------~~~~~~~~~~~~~~~~~~~--------------------------------~~~~~~~~~~--- 174 (399)
T TIGR00893 146 ----------------SWQWAFIIEGVLGIIWGVL--------------------------------WLKFIPDPPQ--- 174 (399)
T ss_pred ----------------CchHHHHHHHHHHHHHHHH--------------------------------hhheecCCCC---
Confidence 4554443111110000000 0000111000
Q ss_pred cCCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCCCCCccHHHhhchHHHHHH
Q 007665 278 QRKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKRGEDYGILQALLSIDMLIL 357 (594)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 357 (594)
+.+ ...+ ++ +.. ..+ . ...+ . ..++++.......++.+++|.++..
T Consensus 175 --~~~-~~~~----~~-------~~~----~~~--~----~~~~--~--------~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (399)
T TIGR00893 175 --KAK-WLTE----EE-------KYI----VVG--G----LLAE--Q--------QGKGPSTPKKYQIKELLKDRRVWGL 220 (399)
T ss_pred --ccc-cCCH----HH-------Hhh----cch--h----hccc--c--------ccccccCCCccchHHHhcCHHHHHH
Confidence 000 0000 00 000 000 0 0000 0 0000111122345788899999988
Q ss_pred HHHHHhhccccceeeccHHHHHHh-cCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCch--HHHHHHHHHHH
Q 007665 358 FLATFCGLGCSLTAIDNLGQIGES-LGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRP--LIMAISLILSA 434 (594)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~--~~~~~~~~~~~ 434 (594)
.+..++.......+..+.|.+.++ .|.++.+++...+...+++.+++++.|+++||++||+..... .....+.++.+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (399)
T TIGR00893 221 ALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLS 300 (399)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHH
Confidence 887777666666666778887764 688888899999999999999999999999999988410000 01111111111
Q ss_pred HHHHHHhccCcchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhh
Q 007665 435 VGDVLIAFPKPGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQL 514 (594)
Q Consensus 435 i~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~ 514 (594)
+........+.....+...+.+.+.....+....+..|.+|++++++++|+.+....+++.+ +|.+.|.+.|.
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~-~~~i~g~l~~~------ 373 (399)
T TIGR00893 301 LLMFATNYVNIPYAALALVALGFFGLGAGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIV-GPIVIGAIAAT------ 373 (399)
T ss_pred HHHHHhccchhHHHHHHHHHHHHhchhhhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhh-hhHHhhhhccC------
Confidence 11111111112222333333333333367888899999999999999999999999999976 99999999987
Q ss_pred hhhhcccccCCCcccccccchHHHHHHHHHHHHHHHHHHHH
Q 007665 515 AEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFI 555 (594)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~ 555 (594)
.++|+..|++.+++.+++.+..+.
T Consensus 374 -----------------~g~~~~~~~~~~~~~~~~~~~~~~ 397 (399)
T TIGR00893 374 -----------------TGSFAGALMVVAALALIGALSYLL 397 (399)
T ss_pred -----------------CCchhHHHHHHHHHHHHHHHHHHH
Confidence 234999999888888777766543
No 23
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.97 E-value=8.3e-28 Score=254.01 Aligned_cols=409 Identities=13% Similarity=0.125 Sum_probs=255.2
Q ss_pred HhhhHHHHHHHHHHHHhhh-hhhchhhhHHHHHHHhCCCHhHHHHHHHHHhhhh-hhhhhhhhhhcccCchHHHHHHHHH
Q 007665 21 LRGRWFMMFASFLIMAGAG-ATYLFGTYSKEIKSTLGYDQTTLNLLSTCKDLGA-NVGVLSGLLAEVTPPWLVLLVGSAM 98 (594)
Q Consensus 21 ~~~~w~~~~~~~l~~~~~g-~~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr~G~r~v~~~g~~l 98 (594)
++.+|.++....+...... ..+.+....|.+++ +|+|+++.+++.+.+.++. +..++.|+++||+|||++++.+.++
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~ 100 (438)
T TIGR00712 22 KRLRWQVFLGIFFGYAAYYLVRKNFALAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLIL 100 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccHHhhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHH
Confidence 3345666554444444332 45556667788876 5999999999665555555 5688999999999999999999888
Q ss_pred HHHHHHHHHHHHhhccCChhHHHHHHHHHHHhhhhhhhhhhhHhHHhhcCC-CceeehhHHHHHhhhhHHHHHHHHHHHH
Q 007665 99 NFGGYFMIWLAVMKKIAKPKVWQMCLYICIGANSQNFANTGSLVTCVKNFP-ESRGMMLGLMKGFVGLSGAVFTQIYLAI 177 (594)
Q Consensus 99 ~~ig~~l~~~a~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp-~~rg~~~gi~~~~~glg~~i~~~l~~~l 177 (594)
.+++.+++... ... ..++..+++.|++.|++.+..++.....+.+++| ++||+++|+...+.++|+.+++++....
T Consensus 101 ~~~~~~~~~~~--~~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~ 177 (438)
T TIGR00712 101 SAAVMLLMGFV--PWA-TSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLG 177 (438)
T ss_pred HHHHHHHHhcc--ccc-cchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHH
Confidence 88887765432 111 1356777889999999999888888888999997 5799999999999889988887665432
Q ss_pred hCCChHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHH
Q 007665 178 YGNDAKSMILLIAWLPALVSLVFVYTIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAV 257 (594)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (594)
... ..+||..|.......++..+
T Consensus 178 ~~~-------------------------------~~~w~~~f~~~~~~~~i~~~-------------------------- 200 (438)
T TIGR00712 178 MAW-------------------------------FNDWHAALYFPAICAIIVAL-------------------------- 200 (438)
T ss_pred HHH-------------------------------hhhhHHHHHHHHHHHHHHHH--------------------------
Confidence 211 12566665522111110000
Q ss_pred HHhhhhcchhhhhhhhhhhhcCCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCC
Q 007665 258 CIFVFLPLFIAFREEFAAWQQRKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPP 337 (594)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (594)
...+..+++++. ... ++.+ + .++|.++ + . . ++ .+.+
T Consensus 201 ------~~~~~~~~~~~~-~~~----~~~~-----~-------------~~~~~~~----~-----~--~---~~-~~~~ 236 (438)
T TIGR00712 201 ------FAFAMMRDTPQS-CGL----PPIE-----E-------------YRNDYPD----D-----Y--N---EK-AEQE 236 (438)
T ss_pred ------HHHHhccCCHHh-cCC----CCch-----h-------------ccccccc----c-----c--c---cc-cccc
Confidence 000111111100 000 0000 0 0000000 0 0 0 00 0000
Q ss_pred CCCCCccHHHhhchHHHHHHHHHHHhhccccceeeccHHHHHHh-cCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhh
Q 007665 338 KRGEDYGILQALLSIDMLILFLATFCGLGCSLTAIDNLGQIGES-LGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILL 416 (594)
Q Consensus 338 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~ 416 (594)
...++...+..+|++.+|...+..++.....+.+..+.|.++++ .|+++.++++...++.+.++++++++|+++||+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~ 316 (438)
T TIGR00712 237 LTAKEIFMQYVLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFK 316 (438)
T ss_pred cchHHHHHHHHccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 00000111346789999988776666555555666788898886 59999999999999999999999999999999975
Q ss_pred hccCCchHHHHHHHHHHHHHHHHHhcc---CcchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhh
Q 007665 417 KYKVPRPLIMAISLILSAVGDVLIAFP---KPGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLG 493 (594)
Q Consensus 417 r~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg 493 (594)
+++ ............++...+... +....+...+..|++.............|.+|++++|++.|+.+....++
T Consensus 317 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g 393 (438)
T TIGR00712 317 GNR---GATGVFFMTLVTIAVIVYWMNPAGNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLG 393 (438)
T ss_pred Ccc---cHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhh
Confidence 431 111111111122222222211 12222223334444332222233346779999999999999999888887
Q ss_pred hhhhhhhHHHhhhhHHHHHhhhhhhcccccCCCcccccccchHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 007665 494 SYVLNVIVVGRLYDREAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFILVMRTR 561 (594)
Q Consensus 494 ~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~ 561 (594)
+..++|.+.|.+.|. .+|...|++..++.+++.++.+++.+++|
T Consensus 394 g~~~gp~l~G~l~~~------------------------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (438)
T TIGR00712 394 GSVAASAIVGYTVDF------------------------FGWDGGFMVMIGGSILAVILLIVVMIGEK 437 (438)
T ss_pred hhhhcchhHHHHHHh------------------------ccchHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 544489999999998 56999999999888888888887776654
No 24
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.97 E-value=6.3e-28 Score=258.33 Aligned_cols=394 Identities=13% Similarity=0.049 Sum_probs=235.8
Q ss_pred HHHHHHHHHHhh-hhhhchhhhHHHHHHHhCCCHhH-HHHH-----HHHHhhhh-hhhhhhhhhhcccCchHHHHHHHHH
Q 007665 27 MMFASFLIMAGA-GATYLFGTYSKEIKSTLGYDQTT-LNLL-----STCKDLGA-NVGVLSGLLAEVTPPWLVLLVGSAM 98 (594)
Q Consensus 27 ~~~~~~l~~~~~-g~~~~~~~~~~~l~~~~~~s~~~-~~~~-----~~~~~~~~-~~~~~~G~l~Dr~G~r~v~~~g~~l 98 (594)
++..+.+..+.. .+...++...|.+.++|+.+..+ .+++ .+...++. +.+++.|+++||+|||+++.+++++
T Consensus 17 ~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~l 96 (490)
T PRK10642 17 AITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVI 96 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHH
Confidence 333334444444 36778888999999998654322 1221 23333444 5688999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccCChhHHH--------HHHHHHHHhhhhhhhhhhhHhHHhhcCC-CceeehhHHHHHhhhhHHHH
Q 007665 99 NFGGYFMIWLAVMKKIAKPKVWQ--------MCLYICIGANSQNFANTGSLVTCVKNFP-ESRGMMLGLMKGFVGLSGAV 169 (594)
Q Consensus 99 ~~ig~~l~~~a~~~~~~~~~~~~--------l~~~r~l~G~g~g~~~~~~~~~i~~~fp-~~rg~~~gi~~~~~glg~~i 169 (594)
+++++++++++ +++.. ++++|+++|+|.|..++.+..++.||+| ++||++.++...+..+|..+
T Consensus 97 ~~i~~~~~a~~-------~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~l 169 (490)
T PRK10642 97 MSISTFCIGLI-------PSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVL 169 (490)
T ss_pred HHHHHHHHHhc-------ccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHH
Confidence 99999988765 56653 7789999999999999999999999997 67999999988777777766
Q ss_pred HHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCcc
Q 007665 170 FTQIYLAIYGNDAKSMILLIAWLPALVSLVFVYTIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVG 249 (594)
Q Consensus 170 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (594)
++.+...+.. .+.-... .+.+||..|.....+ ++..+
T Consensus 170 g~~~~~~~~~------------------~~~~~~~------~~~gWR~~f~i~~~~----~l~~~--------------- 206 (490)
T PRK10642 170 GAGVVVLIST------------------IVGEANF------LDWGWRIPFFIALPL----GIIGL--------------- 206 (490)
T ss_pred HHHHHHHHHH------------------hcCHHHh------cCccHHHHHHHHHHH----HHHHH---------------
Confidence 6543321110 0000000 134777777621111 00000
Q ss_pred ccchhhHHHHhhhhcchhhhhhhhhhhhcCCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCc
Q 007665 250 YIGSAIAVCIFVFLPLFIAFREEFAAWQQRKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPC 329 (594)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (594)
.+....+|. +++..++.+ .++ + + .+ .
T Consensus 207 --------------~~~~~~~es-p~~~~~~~~------------------------~~~---~----~-~~--~----- 232 (490)
T PRK10642 207 --------------YLRHALEET-PAFQQHVDK------------------------LEQ---G----D-RE--G----- 232 (490)
T ss_pred --------------HHHHcCCCC-hhHHHHHHh------------------------hhh---h----c-cc--c-----
Confidence 000001111 111000000 000 0 0 00 0
Q ss_pred CCCCCCCCCCCCCccHHHhhch-HHHHHHH-HHHHhhccccceeeccHHHHHH-hcCCCCCcchhhHHHHhhhhhHhhhh
Q 007665 330 CGNIFKPPKRGEDYGILQALLS-IDMLILF-LATFCGLGCSLTAIDNLGQIGE-SLGYPQHTINTFVSLVSIWNYFGRVF 406 (594)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~a~~~~~~~~i~~~~g~~~ 406 (594)
..++ +..++++.+++ +..+... ...++.....+.+..++|++++ ..|++..++........++..++.++
T Consensus 233 ---~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~ 305 (490)
T PRK10642 233 ---LQDG----PKVSFKEIATKHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPV 305 (490)
T ss_pred ---cccc----ccCCHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 0000 01133445542 2222222 2222222334455567888886 46888877777778888999999999
Q ss_pred hccccHHHhhhccCCchHHHHHHHHH-HHHHHH--HHhccC-cchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccc
Q 007665 407 AGFVSEIILLKYKVPRPLIMAISLIL-SAVGDV--LIAFPK-PGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTL 482 (594)
Q Consensus 407 ~g~l~dr~g~r~~~~~~~~~~~~~~~-~~i~~~--~~~~~~-~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~ 482 (594)
.|+++||+|||+ .+..+.++ .+.+.. .....+ ...+++..++.|++.+...+..+.+..+.+|++.|+++
T Consensus 306 ~g~l~dr~grr~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~ 379 (490)
T PRK10642 306 MGLLSDRFGRRP------FVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSA 379 (490)
T ss_pred HHHHHHHhccHH------HHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHH
Confidence 999999999873 33333332 222222 111222 23344556677777777777788888899999999999
Q ss_pred cchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhhcccccCCCcccccccchHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 007665 483 FNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFILVMRTRR 562 (594)
Q Consensus 483 ~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 562 (594)
.|+.+....+++.+ +|.+.|++.+. .+++...+++..+.++++.+..+++ +|+++
T Consensus 380 ~g~~~~~~~~~g~~-~p~i~g~l~~~-----------------------~~~~~~~~~~~~~~~~i~~~~~~~~-pes~~ 434 (490)
T PRK10642 380 LAAAFNISVLVAGL-TPTLAAWLVES-----------------------TQNLMMPAYYLMVVAVIGLITGVTM-KETAN 434 (490)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHH-----------------------hCCchHHHHHHHHHHHHHHHHHHHh-ccccC
Confidence 99755545555544 89999998876 2345666666666666666655544 55544
No 25
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.96 E-value=9e-28 Score=258.07 Aligned_cols=441 Identities=12% Similarity=0.015 Sum_probs=244.0
Q ss_pred hhHHHHHHHHHHHHhhh-hhhchhhhHHHHHHHh-----CCCHhHHHHHHHHHhhhh-hhhhhhhhhhcccCchHHHHHH
Q 007665 23 GRWFMMFASFLIMAGAG-ATYLFGTYSKEIKSTL-----GYDQTTLNLLSTCKDLGA-NVGVLSGLLAEVTPPWLVLLVG 95 (594)
Q Consensus 23 ~~w~~~~~~~l~~~~~g-~~~~~~~~~~~l~~~~-----~~s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr~G~r~v~~~g 95 (594)
.++.++..+.+..+..+ +....+...|.+.+++ +.+..+.+++.....++. +..++.|+++||+|||+++.++
T Consensus 13 ~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~ 92 (502)
T TIGR00887 13 QHFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGME 92 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHH
Confidence 44444444444445555 4556677777776642 355667778777777766 4588999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHhhhhhhhhhhhHhHHhhcCC-CceeehhHHHHHhhhhHHHHHHHHH
Q 007665 96 SAMNFGGYFMIWLAVMKKIAKPKVWQMCLYICIGANSQNFANTGSLVTCVKNFP-ESRGMMLGLMKGFVGLSGAVFTQIY 174 (594)
Q Consensus 96 ~~l~~ig~~l~~~a~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp-~~rg~~~gi~~~~~glg~~i~~~l~ 174 (594)
.+++.++.++++++... ....++..++++|+++|++.|..++....++.|++| ++||+++++......+|..+++.+.
T Consensus 93 ~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~ 171 (502)
T TIGR00887 93 LIIMIIATVASGLSPGS-SPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVA 171 (502)
T ss_pred HHHHHHHHHHHHHccCc-ccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998877554110 000136788999999999999999999999999998 5799999999998888888877655
Q ss_pred HHHhCCChHHHHHHHHHHHHHHHHHHHHHhcc---CC----------CCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhc
Q 007665 175 LAIYGNDAKSMILLIAWLPALVSLVFVYTIRP---LK----------VSSHPNELKVFYEYLYITISLALCLMGLTIAQK 241 (594)
Q Consensus 175 ~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~----------~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~ 241 (594)
..+... +... .. +..+.+||..+..-...+ +..
T Consensus 172 ~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~----~i~-------- 217 (502)
T TIGR00887 172 LIVLAG----------------------FKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPA----LLA-------- 217 (502)
T ss_pred HHHHHH----------------------hccccccccccccccccccchhcccHHHHHHHHHHHH----HHH--------
Confidence 432210 0000 00 000124554443100000 000
Q ss_pred ccCCCCccccchhhHHHHhhhhcchhhhhhhhhhhhcCCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCC
Q 007665 242 QAHFPHVGYIGSAIAVCIFVFLPLFIAFREEFAAWQQRKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKK 321 (594)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (594)
.+..+..+|+++|...+++.++.. ++...+..+++.++ +
T Consensus 218 ----------------------~~~~~~lpESpr~l~~~~~~~~~a-------------~~~~~~~~~~~~~~---~--- 256 (502)
T TIGR00887 218 ----------------------LYFRLTIPETPRYTADVAKDVEQA-------------ASDMSAVLQVKIEA---E--- 256 (502)
T ss_pred ----------------------HHHHHhCCCCHHHHHHhCcchHHH-------------HHHHHHHhcccccc---C---
Confidence 000011123333321111100000 00000000000000 0
Q ss_pred CCCCCCCcCCCCCCCCCCCCCccHHHhhch---HHH----HHHHHHHHhhccccceeeccHHHHHHhcCCCCCcchh---
Q 007665 322 QEPDQTPCCGNIFKPPKRGEDYGILQALLS---IDM----LILFLATFCGLGCSLTAIDNLGQIGESLGYPQHTINT--- 391 (594)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~--- 391 (594)
.++.+. ..++++ ..+.++++++++ +.. +......++.....+....+.|.++++.|+++.+++.
T Consensus 257 --~~~~~~---~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~~G~~~~~~~~~~~ 330 (502)
T TIGR00887 257 --PDEVEK---ASTAVE-VPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSAIGYSPPAATNNAY 330 (502)
T ss_pred --cccccc---hhcccc-chhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHcCCCCccchhHH
Confidence 000000 000000 001234555542 111 1111222222223345566788999988987654321
Q ss_pred ---------hHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhcc----CcchHHHHHHHHH-H
Q 007665 392 ---------FVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAFP----KPGSVYVASLLVG-F 457 (594)
Q Consensus 392 ---------~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~~l~G-~ 457 (594)
...+..++.+++.+++++++||+|||. ++..+.++..++..++... +........++.. +
T Consensus 331 ~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~------~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 404 (502)
T TIGR00887 331 EELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKP------IQLMGFFILTVLFFVLGFAYNHLSTHGFLAIYVLAQFF 404 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchh------HHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHH
Confidence 233445567778999999999999883 3444444444443333211 1111111111211 2
Q ss_pred HhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhhcccccCCCcccccccchHH
Q 007665 458 SYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGMTRAMVKDLTCIGRQCYRL 537 (594)
Q Consensus 458 ~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 537 (594)
+..+..+..+.+.+|.+|.+.|+++.|+.+..+.+++++ +|.+.+++.|.....++. ....++..
T Consensus 405 ~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~--------------~~~~~~~~ 469 (502)
T TIGR00887 405 ANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAII-GQFGFLYLAQHGDPTKGY--------------PTGIWMGH 469 (502)
T ss_pred HhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHH-HHHHhhhhhccccccccc--------------cccccchH
Confidence 122234556677899999999999999999999999976 899999998752100000 00024567
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhccchh
Q 007665 538 SFTILAGVNIFGALITFILVMRTRRYYSGD 567 (594)
Q Consensus 538 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 567 (594)
.|++++++++++.+.. ++.+|+|+++.+|
T Consensus 470 ~~~i~~~~~~~~~i~~-~~lpEt~~~~lee 498 (502)
T TIGR00887 470 VLEIFALFMFLGILFT-LLIPETKGKSLEE 498 (502)
T ss_pred HHHHHHHHHHHHHHHh-eEeccCCCCCHHh
Confidence 8888888888776654 4557777755443
No 26
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.96 E-value=6.2e-27 Score=243.51 Aligned_cols=345 Identities=10% Similarity=0.068 Sum_probs=235.6
Q ss_pred hhHHHHHHHHHHHHh-hhhhhchhhhHHHHHHHhCCCHhHHHHHH-HHHhhhhhhhhhhhhhhcccCchHHHHHHHHHHH
Q 007665 23 GRWFMMFASFLIMAG-AGATYLFGTYSKEIKSTLGYDQTTLNLLS-TCKDLGANVGVLSGLLAEVTPPWLVLLVGSAMNF 100 (594)
Q Consensus 23 ~~w~~~~~~~l~~~~-~g~~~~~~~~~~~l~~~~~~s~~~~~~~~-~~~~~~~~~~~~~G~l~Dr~G~r~v~~~g~~l~~ 100 (594)
+.|..+......... ....|....+.|++.+++|.+.++.++.. .......+.+++.|++.||+|||++++.+.+++.
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~ 96 (394)
T PRK10213 17 PNWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLT 96 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHH
Confidence 455543433333322 23445555578999999999999999954 4444455679999999999999999999999999
Q ss_pred HHHHHHHHHHhhccCChhHHHHHHHHHHHhhhhhhhhhhhHhHHhhcCC-CceeehhHHHHHhhhhHHHHHHHHHHHHhC
Q 007665 101 GGYFMIWLAVMKKIAKPKVWQMCLYICIGANSQNFANTGSLVTCVKNFP-ESRGMMLGLMKGFVGLSGAVFTQIYLAIYG 179 (594)
Q Consensus 101 ig~~l~~~a~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp-~~rg~~~gi~~~~~glg~~i~~~l~~~l~~ 179 (594)
++.+++.++ ++++.+++.|+++|++.+...+....++.|++| ++|+++.++...+.++|..+++++.+.+.+
T Consensus 97 ~~~~~~~~~-------~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~ 169 (394)
T PRK10213 97 LSCLLVSFA-------NSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGE 169 (394)
T ss_pred HHHHHHHHH-------ChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 988777554 689999999999999999999999999999997 579999999999999999998877765543
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHH
Q 007665 180 NDAKSMILLIAWLPALVSLVFVYTIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCI 259 (594)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (594)
. .+||..|.....+++ ++.+
T Consensus 170 ~--------------------------------~gw~~~f~~~~~l~~---~~~l------------------------- 189 (394)
T PRK10213 170 L--------------------------------IGWRNVFNAAAVMGV---LCIF------------------------- 189 (394)
T ss_pred h--------------------------------cCHHHHHHHHHHHHH---HHHH-------------------------
Confidence 3 355555542111100 0000
Q ss_pred hhhhcchhhhhhhhhhhhcCCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCC
Q 007665 260 FVFLPLFIAFREEFAAWQQRKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKR 339 (594)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (594)
.+....+ + ++. + ++
T Consensus 190 ----~~~~~~p-~------------~~~-----~-----------------------------------------~~--- 203 (394)
T PRK10213 190 ----WIIKSLP-S------------LPG-----E-----------------------------------------PS--- 203 (394)
T ss_pred ----HHHHHCC-C------------CCc-----c-----------------------------------------cc---
Confidence 0000000 0 000 0 00
Q ss_pred CCCccHHHhhchHHHHHHHHHHHhhccccceeeccH-HHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhc
Q 007665 340 GEDYGILQALLSIDMLILFLATFCGLGCSLTAIDNL-GQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKY 418 (594)
Q Consensus 340 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~ 418 (594)
......++.+|+|.+|...+..++.....+....+. |.+.++.|+++.+.+......++++.+++++.+++.||.+++
T Consensus 204 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~~- 282 (394)
T PRK10213 204 HQKQNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVKL- 282 (394)
T ss_pred cchhHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccchh-
Confidence 000123567889998876655444433333333444 666667899998899999999999999999999998884332
Q ss_pred cCCchHHHHHHHHHHHHHHHHHhcc-CcchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhh
Q 007665 419 KVPRPLIMAISLILSAVGDVLIAFP-KPGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVL 497 (594)
Q Consensus 419 ~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~ 497 (594)
.+.....+..+..+++.... +.+.+....++.|++.+...+..++.+.+..| ++.+...+......++|..+
T Consensus 283 -----~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~- 355 (394)
T PRK10213 283 -----ALAGAPLVLAVSALVLTLWGSDKIVATGVAIIWGLTFALVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTC- 355 (394)
T ss_pred -----HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHH-
Confidence 22232222233333332222 33455666788899998888888888888886 66777777777778888876
Q ss_pred hhhHHHhhhhH
Q 007665 498 NVIVVGRLYDR 508 (594)
Q Consensus 498 gp~~~g~l~~~ 508 (594)
||.+.|.++|.
T Consensus 356 G~~l~G~l~~~ 366 (394)
T PRK10213 356 GAAIGGYALDN 366 (394)
T ss_pred HHHHHHHHHhc
Confidence 99999999987
No 27
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.96 E-value=6.9e-27 Score=251.57 Aligned_cols=393 Identities=14% Similarity=0.107 Sum_probs=243.9
Q ss_pred hhHHHHHHHHHHHHhhh-hhhchhhhHHHHHHHhCCCHhHHHHHHHHHhhhh-hhhhhhhhhhcccCchHHHHHHHHHHH
Q 007665 23 GRWFMMFASFLIMAGAG-ATYLFGTYSKEIKSTLGYDQTTLNLLSTCKDLGA-NVGVLSGLLAEVTPPWLVLLVGSAMNF 100 (594)
Q Consensus 23 ~~w~~~~~~~l~~~~~g-~~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr~G~r~v~~~g~~l~~ 100 (594)
++|..+....+..+..+ +....+...|.+.+++|.|..+.+++.+...++. +.+++.|+++||+|||++++.+.++..
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 96 (496)
T PRK03893 17 AQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFS 96 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 45555554445544444 4556777889999999999999999655555555 558899999999999999999999998
Q ss_pred HHHHHHHHHHhhccCChhHHHHHHHHHHHhhhhhhhhhhhHhHHhhcCC-CceeehhHHHHHhhhhHHHHHHHHHHHHhC
Q 007665 101 GGYFMIWLAVMKKIAKPKVWQMCLYICIGANSQNFANTGSLVTCVKNFP-ESRGMMLGLMKGFVGLSGAVFTQIYLAIYG 179 (594)
Q Consensus 101 ig~~l~~~a~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp-~~rg~~~gi~~~~~glg~~i~~~l~~~l~~ 179 (594)
++.++++++ ++++.+++.|++.|++.+..++....++.+++| ++|+++.++...+..+|..+++.+...+.+
T Consensus 97 ~~~~~~~~~-------~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 169 (496)
T PRK03893 97 VGTLACGFA-------PGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVP 169 (496)
T ss_pred HHHHHHHHH-------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 988877654 688999999999999999999888899999998 579999999999999999999999998888
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHhccCCCCC-C----CchhHHHHHHH-----HHHH--HHHHHHHHHhhhhcccCCCC
Q 007665 180 NDAKSMILLIAWLPALVSLVFVYTIRPLKVSS-H----PNELKVFYEYL-----YITI--SLALCLMGLTIAQKQAHFPH 247 (594)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~----~~~~~~f~~~~-----~~~~--~~~~~~~~~~~~~~~~~~~~ 247 (594)
..+|++.++++..+....++........++.+ . ...+..+.... .... .............. ..
T Consensus 170 ~~~w~~~f~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 245 (496)
T PRK03893 170 VWGWRALFFIGILPIIFALWLRKNLPEAEDWKEKHAGKAPVRTMVDILYRGEHRIINILLTLAAAAALWFCFAG----NL 245 (496)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHhCCCchhhhhhccccccchhHHHHHhcchhHHHHHHHHHHHHHHHHHHHHh----hh
Confidence 87888877776665544433222211111100 0 01111111000 0000 00000000000000 00
Q ss_pred ccccchhhHHHHhhhhcchhhhhhhhhhhhcCCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCC
Q 007665 248 VGYIGSAIAVCIFVFLPLFIAFREEFAAWQQRKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQT 327 (594)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (594)
...+......+........+ ..+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~-~~~-------------------------------------------------------- 268 (496)
T PRK03893 246 QNAAIVAVLGLLCAAIFISF-MVQ-------------------------------------------------------- 268 (496)
T ss_pred cchhHHHHHHHHHHHHHHHH-HHH--------------------------------------------------------
Confidence 00000000000000000000 000
Q ss_pred CcCCCCCCCCCCCCCccHHHhhchHHHHHHHHHHHhhccccceeeccHHHHHH-hcCCCCCcchhhHHHHhhhhhHhhhh
Q 007665 328 PCCGNIFKPPKRGEDYGILQALLSIDMLILFLATFCGLGCSLTAIDNLGQIGE-SLGYPQHTINTFVSLVSIWNYFGRVF 406 (594)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~a~~~~~~~~i~~~~g~~~ 406 (594)
.. + .+.+.........+......+....++|.+++ +.|+++.+++.+.+...++..+|+++
T Consensus 269 ------~~-~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~ 330 (496)
T PRK03893 269 ------SS-G-----------KRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCV 330 (496)
T ss_pred ------hc-c-----------cchhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 00 0 00112222222222222222334456788885 77999999999999999999999999
Q ss_pred hccccHHHhhhccCCchHHHHHHHHHHHHHHHHHh-ccCcc--hHHHHHHHHHHHhhhhHHHHHHHHHHhccCCcccccc
Q 007665 407 AGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIA-FPKPG--SVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLF 483 (594)
Q Consensus 407 ~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~--~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~ 483 (594)
.|+++||+++|+ .+..+..+..+..+++. ..... ......++.+.......+..+.++.+.+|++++|+++
T Consensus 331 ~g~l~dr~g~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 404 (496)
T PRK03893 331 GGFLGDWLGTRK------AYVCSLLISQLLIIPVFAIGGANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGL 404 (496)
T ss_pred HHHHHHHhcchH------HHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhccc
Confidence 999999998773 33444444333333222 22221 1222223333333334567778899999999999999
Q ss_pred chhhccchhhhhhhhhhHHHhhhhH
Q 007665 484 NCGQLASPLGSYVLNVIVVGRLYDR 508 (594)
Q Consensus 484 g~~~~~~~lg~~~~gp~~~g~l~~~ 508 (594)
|+.+....+|+.+ +|.+.|.+.|.
T Consensus 405 ~~~~~~~~~g~~l-gp~l~g~l~~~ 428 (496)
T PRK03893 405 GFTYNVGALGGAL-APILGALIAQR 428 (496)
T ss_pred chhhhhhhHHHHH-HHHHHHHHhcc
Confidence 9999999999876 99999999987
No 28
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.96 E-value=2.9e-27 Score=253.74 Aligned_cols=383 Identities=16% Similarity=0.106 Sum_probs=262.7
Q ss_pred hhhchhhhHHHHHHHhCCCHhHHHHHHHHHhhhh-hhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhccCChh
Q 007665 40 ATYLFGTYSKEIKSTLGYDQTTLNLLSTCKDLGA-NVGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIAKPK 118 (594)
Q Consensus 40 ~~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~~~ 118 (594)
+....+...|.+.+++|.+.++.+|+.+.+.++. +..++.|+++||+|||++++.+.+++.++.++++++ ++
T Consensus 17 ~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-------~~ 89 (485)
T TIGR00711 17 DSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVA-------PN 89 (485)
T ss_pred HHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCc-------CC
Confidence 4556778899999999999999999766666666 558899999999999999999999999998877544 68
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhHhHHhhcCC-CceeehhHHHHHhhhhHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHH
Q 007665 119 VWQMCLYICIGANSQNFANTGSLVTCVKNFP-ESRGMMLGLMKGFVGLSGAVFTQIYLAIYGNDAKSMILLIAWLPALVS 197 (594)
Q Consensus 119 ~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp-~~rg~~~gi~~~~~glg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 197 (594)
++.+++.|+++|++.+...+....++.+++| ++|+++.++...+..+|..+++.+.+.+.+..+|++.+++..+..+..
T Consensus 90 ~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~ 169 (485)
T TIGR00711 90 LELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIV 169 (485)
T ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHH
Confidence 8999999999999999999999999999997 679999999999999999999999888888777777777765554444
Q ss_pred HHHHH-HhccCCCCCC--CchhHHHHHHHHHHHHHHHHHHHHhhhh-cccCCCCccccchhhHHHHhhhhcchhhhhhhh
Q 007665 198 LVFVY-TIRPLKVSSH--PNELKVFYEYLYITISLALCLMGLTIAQ-KQAHFPHVGYIGSAIAVCIFVFLPLFIAFREEF 273 (594)
Q Consensus 198 l~~~~-~~~~~~~~~~--~~~~~~f~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (594)
++... +.+..++.+. .+|..... ... +...+...... ....+.++............... .+..++.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~d~~g~~l----~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 240 (485)
T TIGR00711 170 VVVAFFILPRDKPAASENFDFLGLLL----LSV--GLGSLLYGLSEGPERGWFDSNEILILSITGLVAII---AFVVWEL 240 (485)
T ss_pred HHHHHHHcCCccccccCCCcHHHHHH----HHH--HHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHH---HHHHHHH
Confidence 33333 2222222111 12222111 111 11111111111 00011000000000000000000 0000000
Q ss_pred hhhhcCCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCCCCCccHHHhhchHH
Q 007665 274 AAWQQRKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKRGEDYGILQALLSID 353 (594)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 353 (594)
..+++ ....+.+|+|.
T Consensus 241 -----------------------------------------------------------~~~~~-----~~~~~~~~~~~ 256 (485)
T TIGR00711 241 -----------------------------------------------------------TDDNP-----LVDLRLFKYRN 256 (485)
T ss_pred -----------------------------------------------------------cCCCC-----ccCHHHHcCCC
Confidence 00000 11146778888
Q ss_pred HHHHHHHHHhhccccceeeccHHHHHHh-cCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHH
Q 007665 354 MLILFLATFCGLGCSLTAIDNLGQIGES-LGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLIL 432 (594)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 432 (594)
++...+..++.....+....++|.++++ .|+++.+++.......++..+++++.|++.||++|| ..+..+..+
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~------~~~~~g~~~ 330 (485)
T TIGR00711 257 FTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPR------KLVTIGLIL 330 (485)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcH------HHHHHHHHH
Confidence 8877666655555545555677888876 699999999999999999999999999999999877 345666666
Q ss_pred HHHHHHHHhc-c--C-c-chHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhh
Q 007665 433 SAVGDVLIAF-P--K-P-GSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYD 507 (594)
Q Consensus 433 ~~i~~~~~~~-~--~-~-~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~ 507 (594)
.+++..++.. . . + .......++.|++.+..++.......+.+|++++|++.|+.++...+|+.+ |+.+.|.+.+
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~i-g~~i~g~~~~ 409 (485)
T TIGR00711 331 YAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSI-GTALITTILT 409 (485)
T ss_pred HHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 6666665541 1 1 1 334555778899998888777777888899999999999999999999976 9999999987
Q ss_pred HH
Q 007665 508 RE 509 (594)
Q Consensus 508 ~~ 509 (594)
..
T Consensus 410 ~~ 411 (485)
T TIGR00711 410 NR 411 (485)
T ss_pred HH
Confidence 53
No 29
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.96 E-value=1.9e-27 Score=233.90 Aligned_cols=383 Identities=17% Similarity=0.134 Sum_probs=264.0
Q ss_pred hhHHHHHHHHHHHH-hhhhhhchhhhHHHHHHHhCCCHhHHHHH-HHHHhhhhhhhhhhhhhhcccCchHHHHHHHHHHH
Q 007665 23 GRWFMMFASFLIMA-GAGATYLFGTYSKEIKSTLGYDQTTLNLL-STCKDLGANVGVLSGLLAEVTPPWLVLLVGSAMNF 100 (594)
Q Consensus 23 ~~w~~~~~~~l~~~-~~g~~~~~~~~~~~l~~~~~~s~~~~~~~-~~~~~~~~~~~~~~G~l~Dr~G~r~v~~~g~~l~~ 100 (594)
.++..+.++.+... +...-+.++++.+.+++++|+|++|.+++ .+-...+.+..++.|.+.||||.|++..++.++..
T Consensus 11 ~~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~ 90 (417)
T COG2223 11 IARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLL 90 (417)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHH
Confidence 33344444433332 33355678899999999999999999994 55566777889999999999999999999999999
Q ss_pred HHHHHHHHHHhhccCChhHHHHHHHHHHHhhhhhhhhhhhHhHHhhcCCC-ceeehhHHHHHhhhhHHHHHHHHHHHHhC
Q 007665 101 GGYFMIWLAVMKKIAKPKVWQMCLYICIGANSQNFANTGSLVTCVKNFPE-SRGMMLGLMKGFVGLSGAVFTQIYLAIYG 179 (594)
Q Consensus 101 ig~~l~~~a~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp~-~rg~~~gi~~~~~glg~~i~~~l~~~l~~ 179 (594)
+-++..+++.+ .++++++++++++.|++.+ .+...+..+++|||+ ++|.++|+...+ .+|..+...+.
T Consensus 91 IP~~~~~~a~~----~~~~~~ll~~gll~G~~Ga-sFav~m~~~s~~fP~~~qG~AlGI~g~G-N~G~av~q~~~----- 159 (417)
T COG2223 91 IPCLGLAFAVT----YPSTWQLLVIGLLLGLAGA-SFAVGMPNASFFFPKEKQGLALGIAGAG-NLGVAVAQLVA----- 159 (417)
T ss_pred HHHHHHHHHcc----CCchHHHHHHHHHHhcccc-eehcccccccccCChhhhhHHHHHhccc-cccHHHHHHHH-----
Confidence 98877766532 2567899999999999876 556788899999985 689999998844 57776654333
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHH
Q 007665 180 NDAKSMILLIAWLPALVSLVFVYTIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCI 259 (594)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (594)
|.++...+.. .|+.....+....++..+
T Consensus 160 -------------P~v~~~~g~~-----------~w~~~~~i~~~~l~v~~v---------------------------- 187 (417)
T COG2223 160 -------------PLVAVAFGFL-----------AWRNVAGIYVVALAIAAV---------------------------- 187 (417)
T ss_pred -------------HHHHHHHhhH-----------HHHHHHHHHHHHHHHHHH----------------------------
Confidence 3333322100 144333211111000000
Q ss_pred hhhhcchhhhhhhhhhhhcCCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCC
Q 007665 260 FVFLPLFIAFREEFAAWQQRKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKR 339 (594)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (594)
..++..++. +++ +...+.
T Consensus 188 ----~~~~~~~d~-------------p~~---------------------------------------------r~~~~~ 205 (417)
T COG2223 188 ----LAWLGMNDV-------------PEH---------------------------------------------RASVKP 205 (417)
T ss_pred ----HHHHHhCCC-------------hhh---------------------------------------------hccccc
Confidence 000011100 000 000000
Q ss_pred CCCccHHHhhchHHHHHHHHHHHhhccccceeeccHHHHHHh-cCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhc
Q 007665 340 GEDYGILQALLSIDMLILFLATFCGLGCSLTAIDNLGQIGES-LGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKY 418 (594)
Q Consensus 340 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~ 418 (594)
..+...+...++++.|.+.+.++...+.+..+..++|.|+++ .|+++.+++.........+.+.|+++|+++||+|.++
T Consensus 206 ~~~~~~~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~r 285 (417)
T COG2223 206 QLPAQLKAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRR 285 (417)
T ss_pred cchhHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchh
Confidence 000345678889999999999999999999999999999985 5999999999999999999999999999999999774
Q ss_pred cCCchHHHHHHHHHHHHHHHHHhccC--------cchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccc
Q 007665 419 KVPRPLIMAISLILSAVGDVLIAFPK--------PGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLAS 490 (594)
Q Consensus 419 ~~~~~~~~~~~~~~~~i~~~~~~~~~--------~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 490 (594)
.+......++++...+.... ........+..+++.|..-.....+++.+|+ ++.|.+.|++....
T Consensus 286 ------v~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~-~~~G~v~G~vga~G 358 (417)
T COG2223 286 ------VTLAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFP-KETGAVTGIVGAIG 358 (417)
T ss_pred ------HHHHHHHHHHHHHHHHHccccccccCcchHHHHHHHHHHHHHhccCcchheeechHHHH-hhhhHHHHHHHHhc
Confidence 33444444445444433221 1122222333344444444444455555664 68999999999999
Q ss_pred hhhhhhhhhhHHHhhhhHHHHHhhhhhhcccccCCCcccccccchHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 007665 491 PLGSYVLNVIVVGRLYDREAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFILVMRTR 561 (594)
Q Consensus 491 ~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~ 561 (594)
.+|++. -|...|..+|. +++|...|+++..+.+++.+.....+.|.|
T Consensus 359 ~lGGf~-lp~~~g~~~~~-----------------------tg~~~~~f~~~~~~~~~a~v~~~~~y~r~~ 405 (417)
T COG2223 359 GLGGFF-LPLAFGVSLDL-----------------------TGSYTGAFMLLLAFYLVALVLTWALYARRR 405 (417)
T ss_pred cccccc-hhHHHHHHHHh-----------------------cccHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999986 58899999988 578999999999999999988887765553
No 30
>PRK10504 putative transporter; Provisional
Probab=99.96 E-value=1.6e-26 Score=246.94 Aligned_cols=383 Identities=10% Similarity=-0.003 Sum_probs=255.5
Q ss_pred hhhchhhhHHHHHHHhCCCHhHHHHHHHHHhhhh-hhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhccCChh
Q 007665 40 ATYLFGTYSKEIKSTLGYDQTTLNLLSTCKDLGA-NVGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIAKPK 118 (594)
Q Consensus 40 ~~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~~~ 118 (594)
+.+.++...|.+.+++|.|..+.+++.+.+.++. +..++.|+++||+|||++++.+.+++.++.+++.++ ++
T Consensus 25 ~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~-------~~ 97 (471)
T PRK10504 25 DTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCALS-------GT 97 (471)
T ss_pred hHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHh-------CC
Confidence 4556677889999999999999999666666665 568899999999999999999988888887766543 67
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhHhHHhhcCCC-ceeehhHHHHHhhhhHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHH
Q 007665 119 VWQMCLYICIGANSQNFANTGSLVTCVKNFPE-SRGMMLGLMKGFVGLSGAVFTQIYLAIYGNDAKSMILLIAWLPALVS 197 (594)
Q Consensus 119 ~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp~-~rg~~~gi~~~~~glg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 197 (594)
++.+++.|+++|++.+...+.....+.+++|+ +|+++.|+......+|..+++.+.+.+.+..+|++.+.+..+.....
T Consensus 98 ~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~ 177 (471)
T PRK10504 98 LNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIG 177 (471)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHH
Confidence 88889999999999999988888889999984 68999999999888999999999988888777777777765444433
Q ss_pred HHHHHHhccCCCC--CCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHHhhhhcchhhhhhhhhh
Q 007665 198 LVFVYTIRPLKVS--SHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCIFVFLPLFIAFREEFAA 275 (594)
Q Consensus 198 l~~~~~~~~~~~~--~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (594)
.+......+..+. +..+|..... .. .....+........ . +.........+.......+..+..+++
T Consensus 178 ~~~~~~~~~~~~~~~~r~~~~~~~~----~~--~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 246 (471)
T PRK10504 178 AIATLMLMPNYTMQTRRFDLSGFLL----LA--VGMATLTLALDGSK-G--LGLSPLAIAGLVAVGVVALLLYLLHAR-- 246 (471)
T ss_pred HHHHHHhCCCccccCCCCChHHHHH----HH--HHHHHHHHHHhcCC-c--CCcchHHHHHHHHHHHHHHHHHHHHHh--
Confidence 3333222211111 1122222211 11 11111111111110 0 000000001011111111111111110
Q ss_pred hhcCCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCCCCCccHHHhhchHHHH
Q 007665 276 WQQRKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKRGEDYGILQALLSIDML 355 (594)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 355 (594)
..+++ ....+++|||.++
T Consensus 247 ---------------------------------------------------------~~~~~-----~~~~~l~~~~~~~ 264 (471)
T PRK10504 247 ---------------------------------------------------------NNNRA-----LFSLKLFRTRTFS 264 (471)
T ss_pred ---------------------------------------------------------cCCCC-----ccCHHHhcccchH
Confidence 00000 1114578899988
Q ss_pred HHHHHHHhhccccceeeccHHHHHHh-cCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHH
Q 007665 356 ILFLATFCGLGCSLTAIDNLGQIGES-LGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSA 434 (594)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 434 (594)
......++............|++++. .|.++.++++......++..++.++.|++.||+++|+ ++..+..+..
T Consensus 265 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~------~~~~~~~~~~ 338 (471)
T PRK10504 265 LGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRR------VLVATTLGLA 338 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchH------HHHHHHHHHH
Confidence 87776666554444444567888874 7999999999999999999999999999999998773 4455555454
Q ss_pred HHHHHHhcc--Ccc--hHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHH
Q 007665 435 VGDVLIAFP--KPG--SVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDRE 509 (594)
Q Consensus 435 i~~~~~~~~--~~~--~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~ 509 (594)
++..++... ..+ ...+..++.|++.+..++....+..+.+|++.+|.++|+.++...+|..+ |+.+.|.+.+..
T Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~i-g~~i~g~ll~~~ 416 (471)
T PRK10504 339 LVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSI-GVTIAGLLLGLF 416 (471)
T ss_pred HHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHH-HHHHHHHHHHHh
Confidence 444433322 122 22334566778888888888888999999999999999999999999976 999999998874
No 31
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.96 E-value=1.2e-27 Score=250.29 Aligned_cols=376 Identities=14% Similarity=0.110 Sum_probs=237.6
Q ss_pred HhhhHHHHHHHHHHHHhhh-hhhchhhhHHHHHHHhCCCHhHHHHHHHHHhhhh-hhhhhhhhhhcccCchHHHHHHHHH
Q 007665 21 LRGRWFMMFASFLIMAGAG-ATYLFGTYSKEIKSTLGYDQTTLNLLSTCKDLGA-NVGVLSGLLAEVTPPWLVLLVGSAM 98 (594)
Q Consensus 21 ~~~~w~~~~~~~l~~~~~g-~~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr~G~r~v~~~g~~l 98 (594)
.+++|..+.+.++..+..+ ..+.++...|++++++|+|..+.+++.+...++. +.+++.|.++||+|||++++++.++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~ 86 (405)
T TIGR00891 7 TRAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVL 86 (405)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 4577887777777766665 6777888999999999999999999665555555 6689999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccCChhHHHHHHHHHHHhhhhhhhhhhhHhHHhhcCC-CceeehhHHHHHhhhhHHHHHHHHHHHH
Q 007665 99 NFGGYFMIWLAVMKKIAKPKVWQMCLYICIGANSQNFANTGSLVTCVKNFP-ESRGMMLGLMKGFVGLSGAVFTQIYLAI 177 (594)
Q Consensus 99 ~~ig~~l~~~a~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp-~~rg~~~gi~~~~~glg~~i~~~l~~~l 177 (594)
..++.+++.++ ++++.+++.|++.|++.+..++....++.|++| ++|+++.|+...+.++|..+++.+...+
T Consensus 87 ~~~~~~~~~~~-------~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l 159 (405)
T TIGR00891 87 FSAGTLACGFA-------PGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLV 159 (405)
T ss_pred HHHHHHHHHHh-------ccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888877654 688999999999999999999999999999997 5799999999999999999988766654
Q ss_pred hCCChHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHH
Q 007665 178 YGNDAKSMILLIAWLPALVSLVFVYTIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAV 257 (594)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (594)
.+... .+|+..|..... ..+..+
T Consensus 160 ~~~~~------------------------------~~w~~~f~~~~~----~~~~~~----------------------- 182 (405)
T TIGR00891 160 VPVWG------------------------------DGWRALFFISIL----PIIFAL----------------------- 182 (405)
T ss_pred HHhcC------------------------------ccHHHHHHHHHH----HHHHHH-----------------------
Confidence 43211 124444331000 000000
Q ss_pred HHhhhhcchhhhhhhhhhhhcCCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCC
Q 007665 258 CIFVFLPLFIAFREEFAAWQQRKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPP 337 (594)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (594)
......+ +++.+.+++++ +. + .++...+..+ ++. ..+.+
T Consensus 183 ------~~~~~~~-~~~~~~~~~~~--~~------~------~~~~~~~~~~----------~~~----------~~~~~ 221 (405)
T TIGR00891 183 ------WLRKNIP-EAEDWKEKHAG--KA------L------VRTMVDILYG----------GEH----------RIANI 221 (405)
T ss_pred ------HHHHhCC-CChhHHHHhhh--hh------h------hhhHHHHHhc----------cch----------hhhhh
Confidence 0000000 00000000000 00 0 0000000000 000 00000
Q ss_pred CCCCCccHHHhh-ch-HHHHHHHHHHHhhccccceeeccHHHHHH-hcCCCCCcchhhHHHHhhhhhHhhhhhccccHHH
Q 007665 338 KRGEDYGILQAL-LS-IDMLILFLATFCGLGCSLTAIDNLGQIGE-SLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEII 414 (594)
Q Consensus 338 ~~~~~~~~~~~l-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~ 414 (594)
........++.. ++ +.+..+................++|.+.+ +.|+++.+++.+.+...++..+++++.|++.||+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~ 301 (405)
T TIGR00891 222 VMTLAAAMVQSAGKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWL 301 (405)
T ss_pred hhhhhHHhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 000000001111 11 11222222221111222233445676665 5699999999999999999999999999999999
Q ss_pred hhhccCCchHHHHHHHHHHHH-HHHHHhccCc-chHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchh
Q 007665 415 LLKYKVPRPLIMAISLILSAV-GDVLIAFPKP-GSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPL 492 (594)
Q Consensus 415 g~r~~~~~~~~~~~~~~~~~i-~~~~~~~~~~-~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~l 492 (594)
+||+ .+..+.++..+ ...+...... ..+.+..++.+++.+..++..+.++.|.+|++++|+++|+.+....+
T Consensus 302 g~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 375 (405)
T TIGR00891 302 GRRK------AYVCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNL 375 (405)
T ss_pred Cchh------hhHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHH
Confidence 8874 23333333322 2222222222 33344446667777777788888999999999999999999999999
Q ss_pred hhhhhhhhHHHhhhhH
Q 007665 493 GSYVLNVIVVGRLYDR 508 (594)
Q Consensus 493 g~~~~gp~~~g~l~~~ 508 (594)
++.+ +|++.|.+.|.
T Consensus 376 g~~~-g~~~~g~l~~~ 390 (405)
T TIGR00891 376 GGAL-APIIGALLAQR 390 (405)
T ss_pred HHHH-HHHHHHHHHHh
Confidence 9876 99999999998
No 32
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.96 E-value=1.3e-28 Score=263.28 Aligned_cols=405 Identities=14% Similarity=0.071 Sum_probs=246.3
Q ss_pred hhhchhhhHHHHHHHhCCC--------HhHHHHHHHHHhhhh-hhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHH
Q 007665 40 ATYLFGTYSKEIKSTLGYD--------QTTLNLLSTCKDLGA-NVGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAV 110 (594)
Q Consensus 40 ~~~~~~~~~~~l~~~~~~s--------~~~~~~~~~~~~~~~-~~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~ 110 (594)
+...++...|.+..+++.+ ..+.+++.+.+.++. +.++++|+++||+|||++++++.+++.++.+++.+.
T Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~- 121 (481)
T TIGR00879 43 DTGVIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLA- 121 (481)
T ss_pred ccchhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHh-
Confidence 3445666678888887777 889999665555555 669999999999999999999999999988776443
Q ss_pred hhccCChhHHHHHHHHHHHhhhhhhhhhhhHhHHhhcCC-CceeehhHHHHHhhhhHHHHHHHHH---HHHhCCChHHHH
Q 007665 111 MKKIAKPKVWQMCLYICIGANSQNFANTGSLVTCVKNFP-ESRGMMLGLMKGFVGLSGAVFTQIY---LAIYGNDAKSMI 186 (594)
Q Consensus 111 ~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp-~~rg~~~gi~~~~~glg~~i~~~l~---~~l~~~~~~~~~ 186 (594)
. ...+++.++++|+++|+|.+..++....++.|++| ++|++++++...+..+|..+++.+. ....+...|++.
T Consensus 122 -~--~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~ 198 (481)
T TIGR00879 122 -A--FALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIP 198 (481)
T ss_pred -c--cccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHH
Confidence 1 11346688899999999999999999999999997 5799999999999999998887665 222222333333
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHHhhhhcch
Q 007665 187 LLIAWLPALVSLVFVYTIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCIFVFLPLF 266 (594)
Q Consensus 187 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (594)
+++...+.+..++...+++
T Consensus 199 f~~~~~~~~~~~~~~~~l~------------------------------------------------------------- 217 (481)
T TIGR00879 199 LGLQLIPAGLLFLGLFFLP------------------------------------------------------------- 217 (481)
T ss_pred HHHHHHHHHHHHHHHhcCC-------------------------------------------------------------
Confidence 3332222222211111111
Q ss_pred hhhhhhhhhhhcCCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCCCCCccHH
Q 007665 267 IAFREEFAAWQQRKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKRGEDYGIL 346 (594)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (594)
+.+ .+...+++.++.+....+.......+.......+...... .. ..+.+.......+
T Consensus 218 ----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--------------~~~~~~~~~~~~~ 275 (481)
T TIGR00879 218 ----ESP-RWLVGKGRVEEARKSLARLRGTSGEDKELLDELELIDIKR---SI--------------EKRSVQPSWGSLF 275 (481)
T ss_pred ----CCh-HHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHH---HH--------------HHhhccccHHHHH
Confidence 100 0000000000000000000000000000000000000000 00 0000000001111
Q ss_pred Hhh---chHHHHHHHHHHHhhccccceeeccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCch
Q 007665 347 QAL---LSIDMLILFLATFCGLGCSLTAIDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRP 423 (594)
Q Consensus 347 ~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~ 423 (594)
+.. +.+.++...+.++..........++.|.+.++.|++..+++....+..++.++++++.|+++||++||+
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~----- 350 (481)
T TIGR00879 276 SSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRP----- 350 (481)
T ss_pred hcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchH-----
Confidence 111 234445555555544444445556678888888999888888889999999999999999999998873
Q ss_pred HHHHHHHHHHHHHHHHHh---cc--C------cchHHHHHHHHHHHhhhhH-HHHHHHHHHhccCCccccccchhhccch
Q 007665 424 LIMAISLILSAVGDVLIA---FP--K------PGSVYVASLLVGFSYGAQL-TLLFIIISELFGLKYYSTLFNCGQLASP 491 (594)
Q Consensus 424 ~~~~~~~~~~~i~~~~~~---~~--~------~~~~~~~~~l~G~~~g~~~-~~~~~~~~~~~~~~~~g~~~g~~~~~~~ 491 (594)
.+..+.++.+++++++. .. . .........+++.+.+... +....+..|.+|+++++++.|+.+....
T Consensus 351 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 429 (481)
T TIGR00879 351 -LLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANW 429 (481)
T ss_pred -HHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHH
Confidence 34445555555544443 11 1 1112223333333333323 4455677999999999999999999999
Q ss_pred hhhhhhhhhHHHhhhhHHHHHhhhhhhcccccCCCcccccccchHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 007665 492 LGSYVLNVIVVGRLYDREAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFILVMRTRR 562 (594)
Q Consensus 492 lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 562 (594)
+++++ +|.+.+.+.+. .+|...|++.+++++++.++..++.+++|+
T Consensus 430 lg~~i-~~~~~~~~~~~------------------------~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~ 475 (481)
T TIGR00879 430 LANFI-VGFLFPTMLES------------------------IGVGGVFIFFGGLNVLGLIFVYFFLPETKG 475 (481)
T ss_pred HHHHH-HHHHHHHHHHh------------------------cCccceehhHHHHHHHHHHHHheecccCCC
Confidence 99986 88899999887 468889999998888888887776665554
No 33
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.96 E-value=1.2e-26 Score=242.36 Aligned_cols=350 Identities=13% Similarity=0.051 Sum_probs=231.1
Q ss_pred hhHHHHHHHhCCCHhHHHHHHHHHhhhh-hhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHH-hhccCChhHHHHH
Q 007665 46 TYSKEIKSTLGYDQTTLNLLSTCKDLGA-NVGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAV-MKKIAKPKVWQMC 123 (594)
Q Consensus 46 ~~~~~l~~~~~~s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~-~~~~~~~~~~~l~ 123 (594)
.+...+++++|.|..+.+++.+.+.++. +++++.|+++||+|||++++.+.++..++.+.+.++. .......++..++
T Consensus 37 ~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 116 (399)
T PRK05122 37 VLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLAAWPVLSLLLLL 116 (399)
T ss_pred HHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHH
Confidence 3333478999999999999666655555 6699999999999999999999998888766654431 1111112567788
Q ss_pred HHHHHHhhhhhhhhhhhHhHHhhcCC-CceeehhHHHHHhhhhHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHH
Q 007665 124 LYICIGANSQNFANTGSLVTCVKNFP-ESRGMMLGLMKGFVGLSGAVFTQIYLAIYGNDAKSMILLIAWLPALVSLVFVY 202 (594)
Q Consensus 124 ~~r~l~G~g~g~~~~~~~~~i~~~fp-~~rg~~~gi~~~~~glg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~l~~~~ 202 (594)
+.|+++|++.+...+....++.+++| ++|++++|+...+..+|..+++++.+.+.+..
T Consensus 117 ~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~--------------------- 175 (399)
T PRK05122 117 LGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWG--------------------- 175 (399)
T ss_pred HHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcc---------------------
Confidence 99999999999998888888889986 67999999988888888888877665554432
Q ss_pred HhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHHhhhhcchhhhhhhhhhhhcCCCC
Q 007665 203 TIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCIFVFLPLFIAFREEFAAWQQRKQP 282 (594)
Q Consensus 203 ~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (594)
+|+..+...... .+.. . +..++.+ +
T Consensus 176 -----------g~~~~~~~~~~~----~~~~--~------------------------------~~~~~~~-----~--- 200 (399)
T PRK05122 176 -----------GLAGLGLLIMLL----ALLG--L------------------------------LLARPRP-----A--- 200 (399)
T ss_pred -----------cHHHHHHHHHHH----HHHH--H------------------------------HHHhcCC-----C---
Confidence 343332200000 0000 0 0000000 0
Q ss_pred CCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCCCCCccHHHhhchHHHHHHHHHHH
Q 007665 283 TPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKRGEDYGILQALLSIDMLILFLATF 362 (594)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 362 (594)
+++ .++++ .+.++.+++ +|.......
T Consensus 201 -~~~-----------------------------------------------~~~~~----~~~~~~~~~--~~~~~~~~~ 226 (399)
T PRK05122 201 -VPP-----------------------------------------------VKGER----LPFRRVLGR--VWPYGMGLA 226 (399)
T ss_pred -CCC-----------------------------------------------CCccc----hhHHHHHHH--HHHHHHHHH
Confidence 000 00000 011222221 121111111
Q ss_pred hhccccceeeccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhc
Q 007665 363 CGLGCSLTAIDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAF 442 (594)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~ 442 (594)
+..........+.+.++++.|+ .+.+...+.+.++.++++++.|++.||+++|+ .+..+..+.+++..++..
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~------~~~~~~~~~~~~~~~~~~ 298 (399)
T PRK05122 227 LASIGFGTIATFITLYYAARGW--DGAALALTLFGVAFVGARLLFGNLINRLGGLR------VAIVSLLVEILGLLLLWL 298 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHccc--ccchHHHHHHHHHHHHHHHHHHHHHHHhccHH------HHHHHHHHHHHHHHHHHH
Confidence 1111112233455666777666 34566778888999999999999999998763 444555555555554443
Q ss_pred cC-cchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhhccc
Q 007665 443 PK-PGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGMTR 521 (594)
Q Consensus 443 ~~-~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~ 521 (594)
.+ .+..++..++.|++.+..++.......+.+|++++|+++|+.+....++..+ +|++.|.+.|.
T Consensus 299 ~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~-~~~~~g~l~~~------------- 364 (399)
T PRK05122 299 APSPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGI-TGPLAGLVASW------------- 364 (399)
T ss_pred hccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH-------------
Confidence 33 3445556778899988888877778889999999999999999999999865 78899999887
Q ss_pred ccCCCcccccccchHHHHHHHHHHHHHHHHHHHHHHh
Q 007665 522 AMVKDLTCIGRQCYRLSFTILAGVNIFGALITFILVM 558 (594)
Q Consensus 522 ~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 558 (594)
.+|+..|++.+++++++.+....+.+
T Consensus 365 -----------~g~~~~~~~~~~~~~~~~~~~~~~~~ 390 (399)
T PRK05122 365 -----------FGYPSIFLAAALAALLGLALTWLLYR 390 (399)
T ss_pred -----------cCHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 57999999998888888776665543
No 34
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.96 E-value=1.1e-26 Score=248.94 Aligned_cols=433 Identities=13% Similarity=0.069 Sum_probs=246.6
Q ss_pred HHHHHHHHHHHHhhh-hhhchhhhHHHHHHHh--------CCCHhHHHHHHHHHhhhh-hhhhhhhhhhcccCchHHHHH
Q 007665 25 WFMMFASFLIMAGAG-ATYLFGTYSKEIKSTL--------GYDQTTLNLLSTCKDLGA-NVGVLSGLLAEVTPPWLVLLV 94 (594)
Q Consensus 25 w~~~~~~~l~~~~~g-~~~~~~~~~~~l~~~~--------~~s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr~G~r~v~~~ 94 (594)
+.....+.+..+..+ +...++...|.++++| +.+..+.+++.+.+.++. +.+++.|+++||+|||+++++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~ 90 (479)
T PRK10077 11 FSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKI 90 (479)
T ss_pred HHHHHHHHHHHHhcCcccceehHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHH
Confidence 333333334444444 4556666778888877 889999999766666766 558899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhh---c-c-CChhHHHHHHHHHHHhhhhhhhhhhhHhHHhhcCC-CceeehhHHHHHhhhhHHH
Q 007665 95 GSAMNFGGYFMIWLAVMK---K-I-AKPKVWQMCLYICIGANSQNFANTGSLVTCVKNFP-ESRGMMLGLMKGFVGLSGA 168 (594)
Q Consensus 95 g~~l~~ig~~l~~~a~~~---~-~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp-~~rg~~~gi~~~~~glg~~ 168 (594)
+.+++.++.++++++... . . ..+.+..++++|+++|++.|..++....++.|++| ++||+++|+...+..+|..
T Consensus 91 ~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~ 170 (479)
T PRK10077 91 AAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQL 170 (479)
T ss_pred HHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHH
Confidence 999999887776542100 0 0 01235677899999999999999999999999998 5799999999988888877
Q ss_pred HHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCc
Q 007665 169 VFTQIYLAIYGNDAKSMILLIAWLPALVSLVFVYTIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHV 248 (594)
Q Consensus 169 i~~~l~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (594)
+.+.+...+.... ........+||..|.......++ ..+
T Consensus 171 ~~~~~~~~~~~~~------------------------~~~~~~~~gWr~~f~~~~~~~~~---~~~-------------- 209 (479)
T PRK10077 171 VVYFVNYFIARSG------------------------DASWLNTDGWRYMFASEAIPALL---FLM-------------- 209 (479)
T ss_pred HHHHHHHHHhccC------------------------cccccccCChHHHHHHHHHHHHH---HHH--------------
Confidence 7654332221100 00000124666665521111100 000
Q ss_pred cccchhhHHHHhhhhcchhhhhhhhhhhhcCCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCC
Q 007665 249 GYIGSAIAVCIFVFLPLFIAFREEFAAWQQRKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTP 328 (594)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (594)
..+.+++. +++...+.+.++.+ .......++.+.+. ...+ .
T Consensus 210 ----------------~~~~l~~s-~~~l~~~~~~~~~~--------------~~~~~~~~~~~~~~-~~~~---~---- 250 (479)
T PRK10077 210 ----------------LLYFVPET-PRYLMSRGKQEQAE--------------GILRKIMGNTLATQ-ALQE---I---- 250 (479)
T ss_pred ----------------HHHcCCCC-cHHHHHcCCHHHHH--------------HHHHHHcCChhHHH-HHHH---H----
Confidence 00111111 11110000000000 00000000000000 0000 0
Q ss_pred cCCCCCCCCCCCCCccHHHhhchHHHHH---HHHHHHhhccccceeeccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhh
Q 007665 329 CCGNIFKPPKRGEDYGILQALLSIDMLI---LFLATFCGLGCSLTAIDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRV 405 (594)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~ 405 (594)
....++++. ..+..+.-..... .....+..........++.|.+.++.|++...+.......++.+.++.+
T Consensus 251 --~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~ 324 (479)
T PRK10077 251 --KHSLDHGRK----TGGKLLMFGVGVIVIGVMLSVFQQFVGINVVLYYAPEIFKTLGASTDIALLQTIIVGVINLTFTV 324 (479)
T ss_pred --HHHHHHhhh----hhhhhcchhHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHH
Confidence 000000000 0000111000011 1111111111222334456788888898887777777888999999999
Q ss_pred hhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhc---cCcc--hHHHHHHHHHHHhhhhH-HHHHHHHHHhccCCcc
Q 007665 406 FAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAF---PKPG--SVYVASLLVGFSYGAQL-TLLFIIISELFGLKYY 479 (594)
Q Consensus 406 ~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~---~~~~--~~~~~~~l~G~~~g~~~-~~~~~~~~~~~~~~~~ 479 (594)
++++++||++|| .++..+.++.+++.+.+.. .+.. ......++++++.+..+ +..+.+++|.+|+++|
T Consensus 325 ~~g~l~dr~g~r------~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r 398 (479)
T PRK10077 325 LAIMTVDKFGRK------PLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIR 398 (479)
T ss_pred HHHHHHHHhcCh------HHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHH
Confidence 999999999887 3556666666666554432 1211 22223444454444333 5667899999999999
Q ss_pred ccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhhcccccCCCcccccccchHHHHHHHHHHHHHHHHHHHHHHhh
Q 007665 480 STLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFILVMR 559 (594)
Q Consensus 480 g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 559 (594)
+++.|+.+....+++++ ++.+.+.+.+.....+ ..++...|++.++++++++++.+.+.+|
T Consensus 399 ~~~~g~~~~~~~~g~~~-~~~~~p~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~e 459 (479)
T PRK10077 399 GKALAIAVAAQWIANYF-VSWTFPMMDKNSWLVA------------------HFHNGFSYWIYGCMGVLAALFMWKFVPE 459 (479)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHhHHHHhccchhh------------------hccCccHHHHHHHHHHHHHHHHHhcccc
Confidence 99999999999998876 6666655442110000 1456788888888888888777777777
Q ss_pred hhhccchhH
Q 007665 560 TRRYYSGDI 568 (594)
Q Consensus 560 ~~~~~~~~~ 568 (594)
+|+++.+|.
T Consensus 460 ~~~~~~~~~ 468 (479)
T PRK10077 460 TKGKTLEEM 468 (479)
T ss_pred CCCCCHHHH
Confidence 766544333
No 35
>PRK15075 citrate-proton symporter; Provisional
Probab=99.96 E-value=3.9e-26 Score=241.00 Aligned_cols=358 Identities=11% Similarity=0.022 Sum_probs=221.8
Q ss_pred hhHHHHHHHHHHHHhhh-hhhchhhhHHHHHHHhCCCHhHHHH-HHHHHhhh------hhhhhhhhhhhcccCchHHHHH
Q 007665 23 GRWFMMFASFLIMAGAG-ATYLFGTYSKEIKSTLGYDQTTLNL-LSTCKDLG------ANVGVLSGLLAEVTPPWLVLLV 94 (594)
Q Consensus 23 ~~w~~~~~~~l~~~~~g-~~~~~~~~~~~l~~~~~~s~~~~~~-~~~~~~~~------~~~~~~~G~l~Dr~G~r~v~~~ 94 (594)
.||......++..+... +...++...|.++++++.++.+.++ ..+....+ .+.+++.|+++||+|||++++.
T Consensus 12 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~ 91 (434)
T PRK15075 12 SKARAILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIV 91 (434)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHH
Confidence 34444444444445444 7788999999999999998887654 32222211 1346789999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccCChhHH--------HHHHHHHHHhhhhhhhhhhhHhHHhhcCC-CceeehhHHHHHhhhh
Q 007665 95 GSAMNFGGYFMIWLAVMKKIAKPKVW--------QMCLYICIGANSQNFANTGSLVTCVKNFP-ESRGMMLGLMKGFVGL 165 (594)
Q Consensus 95 g~~l~~ig~~l~~~a~~~~~~~~~~~--------~l~~~r~l~G~g~g~~~~~~~~~i~~~fp-~~rg~~~gi~~~~~gl 165 (594)
+.+++.++.++++++ +++. .++++|+++|++.+...+....++.|++| ++||+++++...+..+
T Consensus 92 ~~~~~~~~~~l~~~~-------~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~ 164 (434)
T PRK15075 92 TLSIMASGTLLIAFV-------PGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQV 164 (434)
T ss_pred HHHHHHHHHHHHHhC-------CcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHH
Confidence 999999998887654 4544 46789999999999988888899999997 5799999998888777
Q ss_pred HHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCC
Q 007665 166 SGAVFTQIYLAIYGNDAKSMILLIAWLPALVSLVFVYTIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHF 245 (594)
Q Consensus 166 g~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (594)
|..+++.+...+... +.. ......+||..|..... . .+.
T Consensus 165 g~~~g~~~g~~l~~~----------------------~~~--~~~~~~gWr~~f~~~~~----~---~~~---------- 203 (434)
T PRK15075 165 AVVFAALLGYLLNQW----------------------LSP--AQMAEWGWRIPFLIGCL----I---VPF---------- 203 (434)
T ss_pred HHHHHHHHHHHHHHh----------------------CCH--HHHhccchHHHHHHHHH----H---HHH----------
Confidence 776665444322100 000 00013578877762100 0 000
Q ss_pred CCccccchhhHHHHhhhhcchhhhhhhhhhhhcCCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCC
Q 007665 246 PHVGYIGSAIAVCIFVFLPLFIAFREEFAAWQQRKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPD 325 (594)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (594)
.+..++.. + +.++ .. + +
T Consensus 204 --------------------~~~~~~~~-----~----e~~~----~~--------------------~---~------- 220 (434)
T PRK15075 204 --------------------IFLIRRSL-----E----ETEE----FL--------------------A---R------- 220 (434)
T ss_pred --------------------HHHHHHhc-----C----CCHH----HH--------------------H---h-------
Confidence 00011000 0 0000 00 0 0
Q ss_pred CCCcCCCCCCCCCCCCCccHHHhhchHHHHHHHHH-HHhhccccceeeccHHHHHHh-cCCCCCcchhhHHHHhhhhhHh
Q 007665 326 QTPCCGNIFKPPKRGEDYGILQALLSIDMLILFLA-TFCGLGCSLTAIDNLGQIGES-LGYPQHTINTFVSLVSIWNYFG 403 (594)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~g~s~~~a~~~~~~~~i~~~~g 403 (594)
.++++ .....++..+++..+..... .++.....+....+.|.|+++ .|+++.+++....+..+++.++
T Consensus 221 --------~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 290 (434)
T PRK15075 221 --------KHRPS--MREIFRSLAANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIW 290 (434)
T ss_pred --------hhccc--cccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 00000 00112333455555543222 222333344456678888876 6999888888888899999999
Q ss_pred hhhhccccHHHhhhccCCchHHHHHHHHHHH-HHHHH--HhccCc--chHHHHHHHHHHHhhhhHHHHHHHHHHhccCCc
Q 007665 404 RVFAGFVSEIILLKYKVPRPLIMAISLILSA-VGDVL--IAFPKP--GSVYVASLLVGFSYGAQLTLLFIIISELFGLKY 478 (594)
Q Consensus 404 ~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-i~~~~--~~~~~~--~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~ 478 (594)
+++.|+++||++||+ . +..+.++.. ..... .....+ ........+.+++.+...+....+..|.+|++.
T Consensus 291 ~~~~g~l~Dr~g~r~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~ 364 (434)
T PRK15075 291 LPIGGALSDRIGRRP-----V-LIAFTVLAILTAYPALSWLVAAPSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEV 364 (434)
T ss_pred HHHHHHHHHHhcchH-----H-HHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCc
Confidence 999999999999874 2 222222221 12111 111122 122333455667777666667778899999999
Q ss_pred cccccchhhc-cchhhhhhhhhhHHHhhhhH
Q 007665 479 YSTLFNCGQL-ASPLGSYVLNVIVVGRLYDR 508 (594)
Q Consensus 479 ~g~~~g~~~~-~~~lg~~~~gp~~~g~l~~~ 508 (594)
++++.|+.+. +..+++.+ +|.+.|.+.|.
T Consensus 365 rg~~~g~~~~~~~~~~g~~-~p~~~g~i~~~ 394 (434)
T PRK15075 365 RTAGFSLAYSLATAIFGGF-TPAISTWLIHV 394 (434)
T ss_pred cchheeHHHHHHHHHHhhh-HHHHHHHHHHh
Confidence 9999998654 44444554 89999999887
No 36
>PRK10133 L-fucose transporter; Provisional
Probab=99.96 E-value=3.6e-26 Score=240.48 Aligned_cols=377 Identities=12% Similarity=0.056 Sum_probs=237.7
Q ss_pred hhHHHHHHHHHHHHhhh-hhhchhhhHHHHHHHhCCCHhHHHHHHHHHhhhh-hhhhhhhhhhcccCchHHHHHHHHHHH
Q 007665 23 GRWFMMFASFLIMAGAG-ATYLFGTYSKEIKSTLGYDQTTLNLLSTCKDLGA-NVGVLSGLLAEVTPPWLVLLVGSAMNF 100 (594)
Q Consensus 23 ~~w~~~~~~~l~~~~~g-~~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr~G~r~v~~~g~~l~~ 100 (594)
+.+..++...++.+..+ .....+.+.|++++++|+|+.+.+++.+.+.++. +.+++.|++.||+|||+++.++.+++.
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~ 102 (438)
T PRK10133 23 SYIIPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYA 102 (438)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 34443333333344444 4567788899999999999999999666666655 668999999999999999999999999
Q ss_pred HHHHHHHHHHhhccCChhHHHHHHHHHHHhhhhhhhhhhhHhHHhhcCCCc-eeehhHHHHHhhhhHHHHHHHHHHHHhC
Q 007665 101 GGYFMIWLAVMKKIAKPKVWQMCLYICIGANSQNFANTGSLVTCVKNFPES-RGMMLGLMKGFVGLSGAVFTQIYLAIYG 179 (594)
Q Consensus 101 ig~~l~~~a~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp~~-rg~~~gi~~~~~glg~~i~~~l~~~l~~ 179 (594)
++.+++..+ . .+++++.++++|+++|+|.|...+.....+.++.|++ |+..+++.+..+++|..+++.+...+..
T Consensus 103 ~~~~l~~~~--~--~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~ 178 (438)
T PRK10133 103 LGAALFWPA--A--EIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLIL 178 (438)
T ss_pred HHHHHHHHH--H--hcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 998775321 1 1168999999999999999999999888888887754 5567999999999999888766544321
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHhcc-CCCCC--CCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhH
Q 007665 180 NDAKSMILLIAWLPALVSLVFVYTIRP-LKVSS--HPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIA 256 (594)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~--~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (594)
.... +............. ..+.. ..+|+..|.....+...+ ..
T Consensus 179 ~~~~---------~~~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~--~~----------------------- 224 (438)
T PRK10133 179 SNVP---------HQSQDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLV--AL----------------------- 224 (438)
T ss_pred cCCc---------ccchhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHH--HH-----------------------
Confidence 0000 00000000000000 00000 014444443111110000 00
Q ss_pred HHHhhhhcchhhhhhhhhhhhcCCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCC
Q 007665 257 VCIFVFLPLFIAFREEFAAWQQRKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKP 336 (594)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (594)
.+..++.++ .++ + + . .++
T Consensus 225 ---------~~~~~~~p~---------~~~------~------------------------~-----~---------~~~ 242 (438)
T PRK10133 225 ---------LIMLTKFPA---------LQS------D------------------------N-----H---------SDA 242 (438)
T ss_pred ---------HHHHhcCCC---------CCc------c------------------------c-----c---------ccc
Confidence 000000000 000 0 0 0 000
Q ss_pred CCCCCCccHHHhhchHHHHHHHHHHHhhccccceeeccHHHHH-H-hcCCCCCcchhhHHHHhhhhhHhhhhhccccHHH
Q 007665 337 PKRGEDYGILQALLSIDMLILFLATFCGLGCSLTAIDNLGQIG-E-SLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEII 414 (594)
Q Consensus 337 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~ 414 (594)
+........++++++|.++...+..++..........+.+.++ + ..|+++.+++..+..+.++.++|+++++++.||+
T Consensus 243 ~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~ 322 (438)
T PRK10133 243 KQGSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRF 322 (438)
T ss_pred cccchhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 0000012336778899888766665555555444555666664 5 4699999999999999999999999999999999
Q ss_pred hhhccCCchHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhh
Q 007665 415 LLKYKVPRPLIMAISLILSAVGDVLIAFPKPGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGS 494 (594)
Q Consensus 415 g~r~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~ 494 (594)
++|+ .+..+.++.++++++.........+....+.|++.+..+|...+...+.+| ++.+++.++..+ ..+++
T Consensus 323 g~~~------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~glg~~~i~P~~~s~a~~~~~-~~~~~as~l~~~-~~~g~ 394 (438)
T PRK10133 323 APHK------VLAAYALIAMALCLISAFAGGHVGLIALTLCSAFMSIQYPTIFSLGIKNLG-QDTKYGSSFIVM-TIIGG 394 (438)
T ss_pred CHHH------HHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHcccc-hhhccchhHHhH-Hhccc
Confidence 8873 344444444444333332222233456778999999999999999999887 567888888864 44566
Q ss_pred hhhhhhHHHhhhhH
Q 007665 495 YVLNVIVVGRLYDR 508 (594)
Q Consensus 495 ~~~gp~~~g~l~~~ 508 (594)
.+ +|++.|.+.|.
T Consensus 395 ~~-~~~i~G~l~~~ 407 (438)
T PRK10133 395 GI-VTPVMGFVSDA 407 (438)
T ss_pred hH-HHHHHHHHHHh
Confidence 55 67899999887
No 37
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.96 E-value=9.7e-28 Score=255.79 Aligned_cols=405 Identities=14% Similarity=0.105 Sum_probs=260.8
Q ss_pred HHhhhHHHHHHHHHHHHh-hhhhhchhhhHHHHHH----------------------HhCCCHhHHHHHHHHHhhhh-hh
Q 007665 20 VLRGRWFMMFASFLIMAG-AGATYLFGTYSKEIKS----------------------TLGYDQTTLNLLSTCKDLGA-NV 75 (594)
Q Consensus 20 ~~~~~w~~~~~~~l~~~~-~g~~~~~~~~~~~l~~----------------------~~~~s~~~~~~~~~~~~~~~-~~ 75 (594)
+.+.||.++...+..... ..+...++...+.+++ |++++..+.+++.+.+.++. +.
T Consensus 13 ~~~~r~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~ 92 (465)
T TIGR00894 13 FCSFRLFLSFLLHICNVIIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKWSGALQGLILSSHFYGQIII 92 (465)
T ss_pred ccCcHHHHHHHHHHHHHHHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCCCHHHhhHHHHHHHHHHHHH
Confidence 456777766665555443 3455666666666665 89999999999666666665 55
Q ss_pred hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHhhhhhhhhhhhHhHHhhcCC-Cceee
Q 007665 76 GVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIAKPKVWQMCLYICIGANSQNFANTGSLVTCVKNFP-ESRGM 154 (594)
Q Consensus 76 ~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp-~~rg~ 154 (594)
+++.|+++||+|||+++..+.++..++.+++.++.. .++..+++.|+++|++.+...+....++.+|+| ++|++
T Consensus 93 ~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~ 167 (465)
T TIGR00894 93 QIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAG-----GGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSR 167 (465)
T ss_pred HcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHH-----cCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHH
Confidence 889999999999999999999988888776644311 346778899999999999999999999999998 57999
Q ss_pred hhHHHHHhhhhHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHH
Q 007665 155 MLGLMKGFVGLSGAVFTQIYLAIYGNDAKSMILLIAWLPALVSLVFVYTIRPLKVSSHPNELKVFYEYLYITISLALCLM 234 (594)
Q Consensus 155 ~~gi~~~~~glg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 234 (594)
++|+...+..+|..+++++.+.+.+.. .+|+..|......++ ++.+
T Consensus 168 ~~~~~~~~~~~g~~i~~~l~~~l~~~~-------------------------------~gw~~~f~i~~~~~~---~~~~ 213 (465)
T TIGR00894 168 LLGMSTSGFQLGTFIFLPISGWLCESW-------------------------------GGWPMIFYVFGIVGC---AWSL 213 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcc-------------------------------CCCCeehhhhhHHHH---HHHH
Confidence 999999999999999887765543321 256655552111110 0100
Q ss_pred HHhhhhcccCCCCccccchhhHHHHhhhhcchhhhhhhhhhhhcCCCCCCCcccccccccchhhhhhhhhhhcccccccc
Q 007665 235 GLTIAQKQAHFPHVGYIGSAIAVCIFVFLPLFIAFREEFAAWQQRKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQT 314 (594)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (594)
.+ +...++.+ +.+.... + +++. +.++
T Consensus 214 ~~------------------------------~~~~~~~p-----~~~~~~~------~-----~~~~---~i~~----- 239 (465)
T TIGR00894 214 LW------------------------------FVFPADDP-----SIHPCIS------K-----FEKK---YINS----- 239 (465)
T ss_pred HH------------------------------HHHhcCCc-----ccCCCCC------H-----HHHH---HHHh-----
Confidence 00 00000000 0000000 0 0000 0000
Q ss_pred cccccCCCCCCCCCcCCCCCCCCCCCCCccHHHhhchHHHHHHHHHHHhhccccceeeccHHHHHHh-cCCCCCcchhhH
Q 007665 315 LQTENKKQEPDQTPCCGNIFKPPKRGEDYGILQALLSIDMLILFLATFCGLGCSLTAIDNLGQIGES-LGYPQHTINTFV 393 (594)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~a~~~~ 393 (594)
..++ ...+. .....+++.++++.+|.+.+..++.....+.+..++|.|+++ +|++..++++..
T Consensus 240 ---~~~~-----------~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~ 303 (465)
T TIGR00894 240 ---SLQG-----------QKGST--RQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLS 303 (465)
T ss_pred ---hccc-----------ccCCC--CCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHH
Confidence 0000 00000 011346889999999999888887777667777888988865 699999999999
Q ss_pred HHHhhhhhHhhhhhccccHHHhhhccCCchHH----HHHHHHHHHHHHHHHhc-cCc-chHHHHHHHHHHHhhhhHHHHH
Q 007665 394 SLVSIWNYFGRVFAGFVSEIILLKYKVPRPLI----MAISLILSAVGDVLIAF-PKP-GSVYVASLLVGFSYGAQLTLLF 467 (594)
Q Consensus 394 ~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~----~~~~~~~~~i~~~~~~~-~~~-~~~~~~~~l~G~~~g~~~~~~~ 467 (594)
++..++..++.++.|+++||+++|+...+... ..++..+..+..+.... ... ....+...+.+.+.+...+...
T Consensus 304 ~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 383 (465)
T TIGR00894 304 SLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVL 383 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhh
Confidence 99999999999999999999987643222211 11111111111111221 222 2223334444444444444444
Q ss_pred HHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhhcccccCCCcccccccchHHHHHHHHHHHH
Q 007665 468 IIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNI 547 (594)
Q Consensus 468 ~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~ 547 (594)
....+..| +..|.+.|+.++...+++++ +|.+.|.+.|... .++|...|.+.+++.+
T Consensus 384 ~~~~~~~~-~~~g~~~g~~~~~~~l~~~i-~p~l~g~~~~~~~---------------------~~~~~~~f~~~~~~~~ 440 (465)
T TIGR00894 384 INSLDLAP-RFLGFIKGITGLPGFIGGLI-ASTLAGNILSQDS---------------------KNVWLIVFLIMAFVNI 440 (465)
T ss_pred hchhhcCh-hHHHHHHHHHHHHHHHHHHH-HHHhhheeeCCCC---------------------chHHHHHHHHHHHHHH
Confidence 45556665 68999999999999999976 8889998876510 1358999999998888
Q ss_pred HHHHHHHHH
Q 007665 548 FGALITFIL 556 (594)
Q Consensus 548 ~~~~~~~~~ 556 (594)
++.++...+
T Consensus 441 i~~i~~~~~ 449 (465)
T TIGR00894 441 LCVIFYLIF 449 (465)
T ss_pred HHHHHeeee
Confidence 887666544
No 38
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.95 E-value=2.6e-26 Score=238.31 Aligned_cols=343 Identities=11% Similarity=0.030 Sum_probs=235.8
Q ss_pred hhhchhhhHHHHHHHhCCCHhHHHHHHHHHhhhh-hhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhccCChh
Q 007665 40 ATYLFGTYSKEIKSTLGYDQTTLNLLSTCKDLGA-NVGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIAKPK 118 (594)
Q Consensus 40 ~~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~~~ 118 (594)
.....+.+.|.+.+++|.|..+++++.+.+.++. +.+++.|+++||+|||+++..+.++..++...++++ ++
T Consensus 21 ~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~~-------~~ 93 (381)
T PRK03633 21 AIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGLM-------VG 93 (381)
T ss_pred hhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------cc
Confidence 3445667789999999999999999766666665 568899999999999999999999999988776654 68
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhHhHHhhcCC-CceeehhHHHHHhhhhHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHH
Q 007665 119 VWQMCLYICIGANSQNFANTGSLVTCVKNFP-ESRGMMLGLMKGFVGLSGAVFTQIYLAIYGNDAKSMILLIAWLPALVS 197 (594)
Q Consensus 119 ~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp-~~rg~~~gi~~~~~glg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 197 (594)
++.+++.|+++|++.+...+.....+.++.| ++|++++|+...+..+|..+++.+.+.+.+...+..
T Consensus 94 ~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~------------ 161 (381)
T PRK03633 94 FWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELMSVL------------ 161 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchH------------
Confidence 8999999999999999887776666667775 689999999999999999988877655433211000
Q ss_pred HHHHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHHhhhhcchhhhhhhhhhhh
Q 007665 198 LVFVYTIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCIFVFLPLFIAFREEFAAWQ 277 (594)
Q Consensus 198 l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (594)
.|... ... .++ +++. ..+.+
T Consensus 162 ----------------~~~~~-----~~~--~~~-------------------------------~~~~-~~~~~----- 181 (381)
T PRK03633 162 ----------------PWVTG-----LVL--AAI-------------------------------LPLL-FTRIL----- 181 (381)
T ss_pred ----------------HHHHH-----HHH--HHH-------------------------------HHHH-Hhccc-----
Confidence 11000 000 000 0000 00000
Q ss_pred cCCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCCCCCccHHHhhchHHHHHH
Q 007665 278 QRKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKRGEDYGILQALLSIDMLIL 357 (594)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 357 (594)
++ . . ++++ ..+.++.+|+|.++..
T Consensus 182 -------~~-------------------------------~-----~---------~~~~----~~~~~~~~~~~~~~~~ 205 (381)
T PRK03633 182 -------NQ-------------------------------Q-----A---------ENHD----STSIWPMLKLRQARLG 205 (381)
T ss_pred -------CC-------------------------------C-----C---------CCCC----CCCHHHHHHhcchHHH
Confidence 00 0 0 0000 0123566777777754
Q ss_pred HHHHHhhccccceeeccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHH
Q 007665 358 FLATFCGLGCSLTAIDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGD 437 (594)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~ 437 (594)
....+...........++|.+.++.|+++.+.+...+...++..++++..|++.||+++|+ .+..+..+..++.
T Consensus 206 ~~~~~~~~~~~~~~~~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~------~l~~~~~~~~~~~ 279 (381)
T PRK03633 206 VNGCIISGIVLGSLYGLMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLL------VLRVQVFVVILGS 279 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHH------HHHHHHHHHHHHH
Confidence 4333222222223334578888888999888899999999999999999999999998773 3444444444444
Q ss_pred HHHhccCcchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhh
Q 007665 438 VLIAFPKPGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEK 517 (594)
Q Consensus 438 ~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~ 517 (594)
.... .....+....+.|++.+..++.....+.|..|+++++...+..+...++|+.+ ||.+.|.+.|.
T Consensus 280 ~~~~--~~~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~i-gp~~~G~l~~~--------- 347 (381)
T PRK03633 280 IAML--SQAAMAPALFILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLL-GPSFTAMLMQN--------- 347 (381)
T ss_pred HHHh--hhHHHHHHHHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH---------
Confidence 3332 12223344566677666677777788888888888888888888888999876 99999999988
Q ss_pred hcccccCCCcccccccchHHHHHHHHHHHHHHH
Q 007665 518 GMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGA 550 (594)
Q Consensus 518 ~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~ 550 (594)
.+++..|.+.+.+.++..
T Consensus 348 ---------------~g~~~~f~~~~~~~l~~~ 365 (381)
T PRK03633 348 ---------------YSDNLLFIMIASVSFIYL 365 (381)
T ss_pred ---------------hCccHHHHHHHHHHHHHH
Confidence 468888888776665443
No 39
>PRK09952 shikimate transporter; Provisional
Probab=99.95 E-value=8.9e-26 Score=238.22 Aligned_cols=384 Identities=13% Similarity=0.064 Sum_probs=236.1
Q ss_pred hhHHHHHHHHHHHHhhh-hhhchhhhHHH-HHHHh--CCCHhHHHHHHH-----HHhhhh-hhhhhhhhhhcccCchHHH
Q 007665 23 GRWFMMFASFLIMAGAG-ATYLFGTYSKE-IKSTL--GYDQTTLNLLST-----CKDLGA-NVGVLSGLLAEVTPPWLVL 92 (594)
Q Consensus 23 ~~w~~~~~~~l~~~~~g-~~~~~~~~~~~-l~~~~--~~s~~~~~~~~~-----~~~~~~-~~~~~~G~l~Dr~G~r~v~ 92 (594)
++|.++..+++..+..+ +...++.+.|. +.+++ +.++. .+++.+ ...++. +.+++.|+++||+|||+++
T Consensus 19 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l 97 (438)
T PRK09952 19 RARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRML 97 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHH
Confidence 33445454445544443 66777777764 55665 67766 455321 112222 4467899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCChhHH--------HHHHHHHHHhhhhhhhhhhhHhHHhhcCC-CceeehhHHHHHhh
Q 007665 93 LVGSAMNFGGYFMIWLAVMKKIAKPKVW--------QMCLYICIGANSQNFANTGSLVTCVKNFP-ESRGMMLGLMKGFV 163 (594)
Q Consensus 93 ~~g~~l~~ig~~l~~~a~~~~~~~~~~~--------~l~~~r~l~G~g~g~~~~~~~~~i~~~fp-~~rg~~~gi~~~~~ 163 (594)
+++.+++++++++++++ +++. .++++|+++|++.|..++....++.|++| ++||+..+....+.
T Consensus 98 ~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~ 170 (438)
T PRK09952 98 MLTVWMMGIATALIGLL-------PSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGY 170 (438)
T ss_pred HHHHHHHHHHHHHHhcC-------CcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHH
Confidence 99999999998887665 5554 57789999999999999999999999998 57999999988888
Q ss_pred hhHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhccc
Q 007665 164 GLSGAVFTQIYLAIYGNDAKSMILLIAWLPALVSLVFVYTIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQA 243 (594)
Q Consensus 164 glg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 243 (594)
.+|..+++.+...+... .. .......+||..|...... .+..
T Consensus 171 ~~G~~l~~~~~~~l~~~-----------------------~~-~~~~~~~gWr~~f~~~~~~----~l~~---------- 212 (438)
T PRK09952 171 GVGLLLSTGLVSLISMM-----------------------TT-DEQFLSWGWRIPFLFSIVL----VLIA---------- 212 (438)
T ss_pred HHHHHHHHHHHHHHHHh-----------------------CC-HHHhhccChHHHHHHHHHH----HHHH----------
Confidence 88877776544332110 00 0000134777776621111 0000
Q ss_pred CCCCccccchhhHHHHhhhhcchhhhhh---hhhhhhcCCCCCCCcccccccccchhhhhhhhhhhcccccccccccccC
Q 007665 244 HFPHVGYIGSAIAVCIFVFLPLFIAFRE---EFAAWQQRKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENK 320 (594)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (594)
+.+++ |.+++++++ + +.+
T Consensus 213 -----------------------~~l~~~~~es~~~~~~~------------~------------------------~~~ 233 (438)
T PRK09952 213 -----------------------LWVRNGMEESAEFEQQQ------------H------------------------EQA 233 (438)
T ss_pred -----------------------HHHHHhCCCChhHHHHH------------h------------------------hcc
Confidence 00010 000000000 0 000
Q ss_pred CCCCCCCCcCCCCCCCCCCCCCccHHHhhchHHHHHHHH-HHHhhccccceeeccHHHHHH-hcCCCCCcchhhHHHHhh
Q 007665 321 KQEPDQTPCCGNIFKPPKRGEDYGILQALLSIDMLILFL-ATFCGLGCSLTAIDNLGQIGE-SLGYPQHTINTFVSLVSI 398 (594)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~a~~~~~~~~i 398 (594)
..++ + ....+..+++|..|...+ ..++.....+....+.|.+.+ ..|++.........+.++
T Consensus 234 ------------~~~~-~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~ 297 (438)
T PRK09952 234 ------------AAKK-R---IPVIEALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGG 297 (438)
T ss_pred ------------cccc-c---CCHHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Confidence 0000 0 001123556776666543 233333333445556777765 468877655455556677
Q ss_pred hhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHh--c-c-Cc-chHHHHHHHHHHHhhhhHHHHHHHHHHh
Q 007665 399 WNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIA--F-P-KP-GSVYVASLLVGFSYGAQLTLLFIIISEL 473 (594)
Q Consensus 399 ~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~--~-~-~~-~~~~~~~~l~G~~~g~~~~~~~~~~~~~ 473 (594)
...++.++.|+++||++||+ .+..+.++.+++.+.+. . . +. .......++.+++.+...+..+.+.+|.
T Consensus 298 ~~~i~~~~~g~l~Dr~grr~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~ 371 (438)
T PRK09952 298 LSCLTIPCFAWLADRFGRRR------VYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEM 371 (438)
T ss_pred HHHHHHHHHHHHHHHhCchH------HHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88889999999999999873 23333333333322111 1 1 12 2223344556778787788888999999
Q ss_pred ccCCccccccchhhcc-chhhhhhhhhhHHHhhhhHHHHHhhhhhhcccccCCCcccccccchHHHHHHHHHHHHHHHHH
Q 007665 474 FGLKYYSTLFNCGQLA-SPLGSYVLNVIVVGRLYDREAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALI 552 (594)
Q Consensus 474 ~~~~~~g~~~g~~~~~-~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~ 552 (594)
+|.++|+++.|+.+.. ..+++.+ +|.+.+.+.|.. .++|...+.+..++.+++.+.
T Consensus 372 ~p~~~r~tg~g~~~~~~~~lgg~~-~p~i~g~l~~~~----------------------~~~~~~~~~~~~~~~~i~~v~ 428 (438)
T PRK09952 372 FGASYRYSGAGVGYQVASVVGGGF-TPFIAAALVTYF----------------------GGSWHSVAIYLLAGCLISAMT 428 (438)
T ss_pred CCcchhHHHHhHHHHHHHHHHHHH-HHHHHHHHHHhc----------------------CCCchHHHHHHHHHHHHHHHH
Confidence 9999999999986554 4577765 899999998861 135888888888888887776
Q ss_pred HHHH
Q 007665 553 TFIL 556 (594)
Q Consensus 553 ~~~~ 556 (594)
.+.+
T Consensus 429 ~~~~ 432 (438)
T PRK09952 429 ALLM 432 (438)
T ss_pred HHHc
Confidence 6544
No 40
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.95 E-value=4.3e-27 Score=243.56 Aligned_cols=356 Identities=17% Similarity=0.150 Sum_probs=236.2
Q ss_pred hhhchhhhHHHHHHHhCCCHhHHHHHHHHHhhhh-hhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhccCChh
Q 007665 40 ATYLFGTYSKEIKSTLGYDQTTLNLLSTCKDLGA-NVGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIAKPK 118 (594)
Q Consensus 40 ~~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~~~ 118 (594)
....++...|.+++++|.|..+.+++.+...++. +..++.|+++||+|||++++++.++..++.+++.++ ++
T Consensus 10 ~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-------~~ 82 (379)
T TIGR00881 10 VRKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFS-------TS 82 (379)
T ss_pred hHHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHh-------hh
Confidence 4567788889999999999999999766666665 558899999999999999999999999998887665 67
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhHhHHhhcCC-CceeehhHHHHHhhhhHHHHHHHHHHH-HhCCChHHHHHHHHHHHHHH
Q 007665 119 VWQMCLYICIGANSQNFANTGSLVTCVKNFP-ESRGMMLGLMKGFVGLSGAVFTQIYLA-IYGNDAKSMILLIAWLPALV 196 (594)
Q Consensus 119 ~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp-~~rg~~~gi~~~~~glg~~i~~~l~~~-l~~~~~~~~~~~~~~~~~~~ 196 (594)
++.+++.|++.|++.+...+....++.+++| ++|+++.|+...+..+|..+++++... +.+
T Consensus 83 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~----------------- 145 (379)
T TIGR00881 83 LWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAE----------------- 145 (379)
T ss_pred HHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHh-----------------
Confidence 8899999999999999999999999999998 579999999999998998888743322 211
Q ss_pred HHHHHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHHhhhhcchhhhhhhhhhh
Q 007665 197 SLVFVYTIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCIFVFLPLFIAFREEFAAW 276 (594)
Q Consensus 197 ~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (594)
..+|+..|.....+.+...+. ..+..+++++..
T Consensus 146 ---------------~~~~~~~~~~~~~~~~~~~~~--------------------------------~~~~~~~~~~~~ 178 (379)
T TIGR00881 146 ---------------LYSWHWVFIVPGIIAIIVSLI--------------------------------CFLLLRDSPQSC 178 (379)
T ss_pred ---------------cCCchhHHHHHHHHHHHHHHH--------------------------------HheeeCCCcccc
Confidence 235665554111111000000 001111110000
Q ss_pred hcCCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCCCCCccHHHhhchHHHHH
Q 007665 277 QQRKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKRGEDYGILQALLSIDMLI 356 (594)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 356 (594)
.. ++.+ + + + . ++ .++++. ..+++....+...++.+|+|.+|.
T Consensus 179 ~~-----~~~~-----~----------------~--~----~-~~--~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 220 (379)
T TIGR00881 179 GL-----PPAE-----E----------------M--P----N-EE--PDGDAE---KKEEELTKKQIFLQYVLLNKVLWY 220 (379)
T ss_pred cc-----Cccc-----c----------------C--c----c-cc--cccccc---cccccccchHHHHHHHHhcchHHH
Confidence 00 0000 0 0 0 0 00 000000 000001111123467788999998
Q ss_pred HHHHHHhhccccceeeccHHHHHHh-cCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHH
Q 007665 357 LFLATFCGLGCSLTAIDNLGQIGES-LGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAV 435 (594)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i 435 (594)
+.+..++.......+..+.|.+.++ .|+++.+++...+...++..+++++.|++.||..+|+ +............+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~---~~~~~~~~~~~~~~ 297 (379)
T TIGR00881 221 ISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGR---RGPLAVFFMALIIV 297 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCc---chHHHHHHHHHHHH
Confidence 8777666655555566677777764 6999999999999999999999999999999875442 11222222222222
Q ss_pred HHHHHhcc-C--cchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhH
Q 007665 436 GDVLIAFP-K--PGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDR 508 (594)
Q Consensus 436 ~~~~~~~~-~--~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~ 508 (594)
+....... . .....+..++.|+......+....+..|.+|++++|++.|+.+....+++.+ +|.+.|.+.|.
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~-~~~~~g~l~~~ 372 (379)
T TIGR00881 298 SLLVYWLNPAANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGIL-AGLPLGYLADG 372 (379)
T ss_pred HHHHHhcCcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhh-hhhhHHHHHHh
Confidence 22222221 1 2233344556666555555666778899999999999999999999999976 99999999987
No 41
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.95 E-value=9e-26 Score=234.24 Aligned_cols=353 Identities=13% Similarity=0.060 Sum_probs=234.6
Q ss_pred hhchhhhHHHHHHHhCCCHhHHHHHHHHHhhhh-hhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhccCChhH
Q 007665 41 TYLFGTYSKEIKSTLGYDQTTLNLLSTCKDLGA-NVGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIAKPKV 119 (594)
Q Consensus 41 ~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~~~~ 119 (594)
.+......|.+++|+|.|.++.+++.+...++. +.+++.|+++||+|||+++.++.++.+++.++++++ +++
T Consensus 19 ~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~-------~~~ 91 (382)
T PRK10091 19 EFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLS-------SSY 91 (382)
T ss_pred HHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHh-------CcH
Confidence 345666789999999999999999666655555 568999999999999999999999999998887655 789
Q ss_pred HHHHHHHHHHhhhhhhhhhhhHhHHhhcCCC-ceeehhHHHHHhhhhHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHH
Q 007665 120 WQMCLYICIGANSQNFANTGSLVTCVKNFPE-SRGMMLGLMKGFVGLSGAVFTQIYLAIYGNDAKSMILLIAWLPALVSL 198 (594)
Q Consensus 120 ~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp~-~rg~~~gi~~~~~glg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~l 198 (594)
+.+++.|+++|++.+...+.....+.+++|+ +|++++++...+..+|..+++++.+.+.+.
T Consensus 92 ~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~------------------ 153 (382)
T PRK10091 92 LMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQE------------------ 153 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhh------------------
Confidence 9999999999999998887777888999975 689999999988889998888766554332
Q ss_pred HHHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHHhhhhcchhhhhhhhhhhhc
Q 007665 199 VFVYTIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCIFVFLPLFIAFREEFAAWQQ 278 (594)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (594)
.+||..|.....+.+...+. .....++.
T Consensus 154 --------------~gwr~~f~~~~~~~~~~~~~--------------------------------~~~~lp~~------ 181 (382)
T PRK10091 154 --------------FSWRYTFLLIAVFNIAVLAS--------------------------------IYFWVPDI------ 181 (382)
T ss_pred --------------ccHHHHHHHHHHHHHHHHHH--------------------------------HHHhCCCC------
Confidence 35665555211111000000 00000000
Q ss_pred CCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCCCCCccHHHhhchHHHHHHH
Q 007665 279 RKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKRGEDYGILQALLSIDMLILF 358 (594)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 358 (594)
+ + + .+. + .....+.+|++.+|...
T Consensus 182 -------~------~------------------------~---------------~~~-~---~~~~~~~~~~~~~~~~~ 205 (382)
T PRK10091 182 -------R------D------------------------E---------------AKG-G---LREQFHFLRSPAPWLIF 205 (382)
T ss_pred -------C------c------------------------c---------------ccc-C---HHHHHHHhcChHHHHHH
Confidence 0 0 0 000 0 00113456777777765
Q ss_pred HHHHhhccccceeeccHHHHHH-hcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHH
Q 007665 359 LATFCGLGCSLTAIDNLGQIGE-SLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGD 437 (594)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~ 437 (594)
...++.....+....+.+.+++ ..|+++.+.+...++..++.++++++.|++.||+++|+ ++..+..+..++.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~------~~~~~~~~~~i~~ 279 (382)
T PRK10091 206 AATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLR------IAAVTDFIIVLAL 279 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchh------HHHHHHHHHHHHH
Confidence 5544433222222334444554 57999999999999999999999999999999998763 4445555555555
Q ss_pred HHHhc-cC-cchHHHHHHHHHHHhhhhHHHHHH-HHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhh
Q 007665 438 VLIAF-PK-PGSVYVASLLVGFSYGAQLTLLFI-IISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQL 514 (594)
Q Consensus 438 ~~~~~-~~-~~~~~~~~~l~G~~~g~~~~~~~~-~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~ 514 (594)
+++.. .+ .+...+..++.+++.+...+.... ...+..+.+..+.+ ..+....+|..+ ||.+.|.++|.
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~-Gp~~~G~l~~~------ 350 (382)
T PRK10091 280 LMLFFFGGMKTASLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAA--GGQIAFNLGSAI-GAYCGGMMLTL------ 350 (382)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHH--HHHHHHHHHHHH-HHHHhHHHHHc------
Confidence 44332 22 233333444555555444443333 34444444555543 335667888876 99999999997
Q ss_pred hhhhcccccCCCcccccccchHHHHHHHHHHHHHHHHHHHHHHh
Q 007665 515 AEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFILVM 558 (594)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 558 (594)
..+|+..+.+.+++++++........+
T Consensus 351 -----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (382)
T PRK10091 351 -----------------GLAYNYVALPAALLSFAAMSSLLLYGR 377 (382)
T ss_pred -----------------ccCcchHHHHHHHHHHHHHHHHHHHhh
Confidence 368999999888777766665555543
No 42
>PRK12382 putative transporter; Provisional
Probab=99.95 E-value=7.6e-26 Score=235.85 Aligned_cols=341 Identities=14% Similarity=0.016 Sum_probs=224.8
Q ss_pred HHHHHhCCCHhHHHHHHHHHhhhh-hhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHH-hhccCChhHHHHHHHHH
Q 007665 50 EIKSTLGYDQTTLNLLSTCKDLGA-NVGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAV-MKKIAKPKVWQMCLYIC 127 (594)
Q Consensus 50 ~l~~~~~~s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~-~~~~~~~~~~~l~~~r~ 127 (594)
.+++++|.|..+.+++.+.+.++. +.+++.|+++||+|||++++.+.+...++.+...++. ......++++.+++.|+
T Consensus 41 ~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 120 (392)
T PRK12382 41 FVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSAPFKFALLVVGRL 120 (392)
T ss_pred HHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHH
Confidence 468899999999999555555554 6699999999999999999999887776654322111 01111247888899999
Q ss_pred HHhhhhhhhhhhhHhHHhhcCC-CceeehhHHHHHhhhhHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHhcc
Q 007665 128 IGANSQNFANTGSLVTCVKNFP-ESRGMMLGLMKGFVGLSGAVFTQIYLAIYGNDAKSMILLIAWLPALVSLVFVYTIRP 206 (594)
Q Consensus 128 l~G~g~g~~~~~~~~~i~~~fp-~~rg~~~gi~~~~~glg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 206 (594)
++|++.+...+...+.+.+++| ++|++++|+...+..+|..+++++.+.+.+..
T Consensus 121 l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~------------------------- 175 (392)
T PRK12382 121 ILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHF------------------------- 175 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhcc-------------------------
Confidence 9999999888888888899997 67999999998888888888877665544322
Q ss_pred CCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHHhhhhcchhhhhhhhhhhhcCCCCCCCc
Q 007665 207 LKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCIFVFLPLFIAFREEFAAWQQRKQPTPAS 286 (594)
Q Consensus 207 ~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (594)
+|+..+. +.....+.. . +..++. ++. ++
T Consensus 176 -------g~~~~~~----~~~~~~~~~--~------------------------------~~~~~~------~~~---~~ 203 (392)
T PRK12382 176 -------GFAALAL----TTMVLPLLA--W------------------------------AFNGTV------RKV---PA 203 (392)
T ss_pred -------ChHHHHH----HHHHHHHHH--H------------------------------HHHHhc------cCC---CC
Confidence 3332221 000000000 0 000000 000 00
Q ss_pred ccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCCCCCccHHHhh---chHHHHHHHHHHHh
Q 007665 287 AVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKRGEDYGILQAL---LSIDMLILFLATFC 363 (594)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~~~~~~~~~ 363 (594)
+ ..+++ +.++.+ +.+.+.....
T Consensus 204 -------------------------------~--------------~~~~~------~~~~~~~~~~~~~~~~~l~---- 228 (392)
T PRK12382 204 -------------------------------H--------------AGERP------SLWSVVGLIWKPGLGLALQ---- 228 (392)
T ss_pred -------------------------------C--------------cccCc------hHHHHHHHHHHhHHHHHHH----
Confidence 0 00000 011111 1222211111
Q ss_pred hccccceeeccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhcc
Q 007665 364 GLGCSLTAIDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAFP 443 (594)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~~ 443 (594)
.........+.+.++++.+++ +.+.......++..+++++.|++.||+++|+ .+..+..+..++.+++...
T Consensus 229 -~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~------~~~~~~~~~~~~~~~~~~~ 299 (392)
T PRK12382 229 -GVGFAVIGTFVSLYFASKGWA--MAGFTLTAFGGAFVLMRVLFGWMPDRFGGVK------VAIVSLLVETVGLLLLWLA 299 (392)
T ss_pred -HHHHhHHHHHHHHHHHhcCCc--hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCe------ehHHHHHHHHHHHHHHHHc
Confidence 111112234556777777764 3556677788888999999999999998764 2334444555555444433
Q ss_pred C-cchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhhcccc
Q 007665 444 K-PGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGMTRA 522 (594)
Q Consensus 444 ~-~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~ 522 (594)
+ ....++..++.|++.+...+.......+.++++++|+++|+.++...+++.+ +|.+.|.+.|.
T Consensus 300 ~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i-g~~~~g~l~~~-------------- 364 (392)
T PRK12382 300 PTAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGV-SGPLAGMLATS-------------- 364 (392)
T ss_pred ccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH--------------
Confidence 3 3344556778888888888888888889999999999999999999999876 99999999988
Q ss_pred cCCCcccccccchHHHHHHHHHHHHHHHHHHHHH
Q 007665 523 MVKDLTCIGRQCYRLSFTILAGVNIFGALITFIL 556 (594)
Q Consensus 523 ~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 556 (594)
.+|+..|.+.+++.+++.++....
T Consensus 365 ----------~g~~~~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 365 ----------FGYPSVFLAGAISAVLGIIVTILS 388 (392)
T ss_pred ----------hCchHHHHHHHHHHHHHHHHHHhh
Confidence 579999999998888887766544
No 43
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.95 E-value=1.7e-25 Score=233.74 Aligned_cols=358 Identities=11% Similarity=0.044 Sum_probs=235.6
Q ss_pred hHHHHHHHhCCCHhHHHHHHHHHhhhh-hhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHH
Q 007665 47 YSKEIKSTLGYDQTTLNLLSTCKDLGA-NVGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIAKPKVWQMCLY 125 (594)
Q Consensus 47 ~~~~l~~~~~~s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~~~~~~l~~~ 125 (594)
+.+.+.+++|.|.++.+++.+.+.++. +..++.|++.||+|||+++..+.++..++.+++.+ .. ..+++++.+++.
T Consensus 35 ~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~--~~-~~~~~~~~l~~~ 111 (402)
T TIGR00897 35 WLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIV--FG-LGHANYPLILLF 111 (402)
T ss_pred hHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHH--Hh-ccCccHHHHHHH
Confidence 345566889999999999655555554 66999999999999999999999998888665421 11 111467788889
Q ss_pred HHHHhhhhhhhhhhhHhHHhhcCC-CceeehhHHHHHhhhhHHH-HHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHH
Q 007665 126 ICIGANSQNFANTGSLVTCVKNFP-ESRGMMLGLMKGFVGLSGA-VFTQIYLAIYGNDAKSMILLIAWLPALVSLVFVYT 203 (594)
Q Consensus 126 r~l~G~g~g~~~~~~~~~i~~~fp-~~rg~~~gi~~~~~glg~~-i~~~l~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~ 203 (594)
|++.|+|.+...+.....+.+++| ++|++++|+...+.++|.. +++.+.+.+.+.
T Consensus 112 ~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~----------------------- 168 (402)
T TIGR00897 112 YGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPA----------------------- 168 (402)
T ss_pred HHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-----------------------
Confidence 999999998877777777788876 6899999999998888864 555444433322
Q ss_pred hccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHHhhhhcchhhhhhhhhhhhcCCCCC
Q 007665 204 IRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCIFVFLPLFIAFREEFAAWQQRKQPT 283 (594)
Q Consensus 204 ~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (594)
.+|+..++......... .. + ..+..++++
T Consensus 169 ---------~g~~~~~~~~~~~~~~~--~~------------------------~------~~~~~~~~~---------- 197 (402)
T TIGR00897 169 ---------FGEMNTLWSALAFVLTG--GV------------------------I------ALFSNKDIF---------- 197 (402)
T ss_pred ---------cchHHHHHHHHHHHHHH--HH------------------------H------HHhccCCCC----------
Confidence 23322222110000000 00 0 000001000
Q ss_pred CCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCCCCCccHHHhhchHHHHHHHHHHHh
Q 007665 284 PASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKRGEDYGILQALLSIDMLILFLATFC 363 (594)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 363 (594)
++.+ + + + +++........++.+|+|.+|...+..++
T Consensus 198 ~~~~-----~------------------------~-----~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (402)
T TIGR00897 198 TPQH-----M------------------------Q-----T----------REKFSELGKAATILFTNPNVLLGGMVRII 233 (402)
T ss_pred Cccc-----c------------------------c-----C----------CcchhhHHHHHHHHHcChhHHHHHHHHHH
Confidence 0000 0 0 0 00000001124567899999887776666
Q ss_pred hccccceeeccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHH---HHHH
Q 007665 364 GLGCSLTAIDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVG---DVLI 440 (594)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~---~~~~ 440 (594)
.....+.+..+.|.+.+++|+++.+++...+...+++.++++..|+++||++||+ .....+.+...++ +...
T Consensus 234 ~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~-----~~~~~~~l~~~~~~~~l~~~ 308 (402)
T TIGR00897 234 NTIGLFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMN-----TVRWFGGVGCGIFTLALYYI 308 (402)
T ss_pred HHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchh-----HHHHHHHHHHHHHHHHHHHH
Confidence 5555556667889888889999999888889999999999999999999998764 2222222222221 1111
Q ss_pred hc--c-CcchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhh
Q 007665 441 AF--P-KPGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEK 517 (594)
Q Consensus 441 ~~--~-~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~ 517 (594)
.. . +....++..++.|++.+...+ ......+.. ++++|+++|+.+....+++.+ +|++.|.++|.
T Consensus 309 ~~~~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~-~~~~g~~~g~~~~~~~lg~~~-gp~i~g~l~~~--------- 376 (402)
T TIGR00897 309 PQHFGHSFAVALIIAIALGIFLAGYVP-LAAVFPTLA-PKHKGAAMSVLNLSAGLSAFL-APAIAVLFIGF--------- 376 (402)
T ss_pred HHccCCcHHHHHHHHHHHHHHHHHHHH-HHHHHHhhC-cchhHHHHHHHHHHHHHHHHH-HHHHHHHHHhh---------
Confidence 11 1 223344566777887776544 345556654 578999999999999999976 99999999988
Q ss_pred hcccccCCCcccccccchHHHHHHHHHHHHHHHHHHHHHH
Q 007665 518 GMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFILV 557 (594)
Q Consensus 518 ~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 557 (594)
.++...|++.+++.+++.++..+++
T Consensus 377 ---------------~g~~~~~~~~a~~~~i~~~~~~~~~ 401 (402)
T TIGR00897 377 ---------------FGAIGVVWIFAALYVVSAFLTAFIR 401 (402)
T ss_pred ---------------cchHHHHHHHHHHHHHHHHHHHHhc
Confidence 4688899999888888887777653
No 44
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.95 E-value=1.5e-25 Score=234.72 Aligned_cols=353 Identities=15% Similarity=-0.013 Sum_probs=233.6
Q ss_pred HhhhHHHHHHHHHHHHhhh-hhhchhhhHHHHHHHhCCCHhHHHHHHHHHhhhh-hhhhhhhhhhcccCchHHHHHHHHH
Q 007665 21 LRGRWFMMFASFLIMAGAG-ATYLFGTYSKEIKSTLGYDQTTLNLLSTCKDLGA-NVGVLSGLLAEVTPPWLVLLVGSAM 98 (594)
Q Consensus 21 ~~~~w~~~~~~~l~~~~~g-~~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr~G~r~v~~~g~~l 98 (594)
.++.|+..+...+..+... ....+.+..|.+.+++|.|..+.++..+.+.++. +..++.|+++||+|||++++++.++
T Consensus 8 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~ 87 (406)
T PRK15402 8 GRQALLFPLCLVLFEFATYIANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAF 87 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHH
Confidence 3555655555555544332 3444556678899999999999999655555555 5688999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccCChhHHHHHHHHHHHhhhhhhhhhhhHhHHhhcCCC-ceeehhHHHHHhhhhHHHHHHHHHHHH
Q 007665 99 NFGGYFMIWLAVMKKIAKPKVWQMCLYICIGANSQNFANTGSLVTCVKNFPE-SRGMMLGLMKGFVGLSGAVFTQIYLAI 177 (594)
Q Consensus 99 ~~ig~~l~~~a~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp~-~rg~~~gi~~~~~glg~~i~~~l~~~l 177 (594)
..++.++++.+ ++++.+++.|+++|++.+...+.....+.|++|+ +|+++.++......++..+++.+.+.+
T Consensus 88 ~~~~~~~~~~~-------~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l 160 (406)
T PRK15402 88 FILTCLAILLA-------QSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAAL 160 (406)
T ss_pred HHHHHHHHHHH-------ccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88887776554 6788889999999999998888888889999985 678888988777777777776655443
Q ss_pred hCCChHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHH
Q 007665 178 YGNDAKSMILLIAWLPALVSLVFVYTIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAV 257 (594)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (594)
.+ ..+|+..|.....+.+ +..+
T Consensus 161 ~~--------------------------------~~~w~~~~~~~~~~~~---~~~~----------------------- 182 (406)
T PRK15402 161 IH--------------------------------VLPWRGMFVLFAALAA---LSFF----------------------- 182 (406)
T ss_pred HH--------------------------------ccCccHHHHHHHHHHH---HHHH-----------------------
Confidence 32 2356665542111110 0000
Q ss_pred HHhhhhcchhhhhhhhhhhhcCCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCC
Q 007665 258 CIFVFLPLFIAFREEFAAWQQRKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPP 337 (594)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (594)
......+++ + ++. + .+.+
T Consensus 183 ------~~~~~~~~~-~---------~~~-------------------------------~---------------~~~~ 200 (406)
T PRK15402 183 ------GLWRAMPET-A---------GRV-------------------------------G---------------EKLS 200 (406)
T ss_pred ------HHHHhCCCC-C---------ccc-------------------------------c---------------cccc
Confidence 000000000 0 000 0 0000
Q ss_pred CCCCCccHHHhhchHHHHHHHHHHHhhccccceeeccHHHHHH-hcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhh
Q 007665 338 KRGEDYGILQALLSIDMLILFLATFCGLGCSLTAIDNLGQIGE-SLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILL 416 (594)
Q Consensus 338 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~ 416 (594)
........++.+++|.+|...+..++............|.+++ +.|+++.+.+.......++..+|+++.|+++||+++
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~ 280 (406)
T PRK15402 201 LKELGRDYKLVLKNRRFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPL 280 (406)
T ss_pred HHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCH
Confidence 0000123467788998887766654443332333344566654 578988888888777888899999999999999987
Q ss_pred hccCCchHHHHHHHHHHHHHHHHHhc-----c-CcchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccc
Q 007665 417 KYKVPRPLIMAISLILSAVGDVLIAF-----P-KPGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLAS 490 (594)
Q Consensus 417 r~~~~~~~~~~~~~~~~~i~~~~~~~-----~-~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 490 (594)
|+ .+..+.++.+++..++.. . +...+.+..++.|++.+...+......... +++++|+..+..+...
T Consensus 281 ~~------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~ 353 (406)
T PRK15402 281 RS------LIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFGIGLANAGLYRLTLFS-SDVSKGTVSAAMGMLS 353 (406)
T ss_pred HH------HHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHhhhHHHHHhhh-ccccccHHHHHHHHHH
Confidence 63 445555555555444332 1 123345566778888887776665554443 3489999999999999
Q ss_pred hhhhhhhhhhHHHhhhhH
Q 007665 491 PLGSYVLNVIVVGRLYDR 508 (594)
Q Consensus 491 ~lg~~~~gp~~~g~l~~~ 508 (594)
.++..+ |+.+.+.+++.
T Consensus 354 ~~~~~~-g~~~~~~l~~~ 370 (406)
T PRK15402 354 MLIFTV-GIELSKHAYLG 370 (406)
T ss_pred HHHHHH-HHHHHHhcccC
Confidence 998875 99999999887
No 45
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.95 E-value=5.4e-26 Score=233.61 Aligned_cols=331 Identities=16% Similarity=0.090 Sum_probs=231.1
Q ss_pred hhchhhhHHHHHHHhCCCHhHHHHHHHHHhhhh-hhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhccCChhH
Q 007665 41 TYLFGTYSKEIKSTLGYDQTTLNLLSTCKDLGA-NVGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIAKPKV 119 (594)
Q Consensus 41 ~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~~~~ 119 (594)
...++...|.+++++|+|.++.+++.+.+.++. +.+++.|++.||+|||+++.++.++..++.+.+ .+ +++
T Consensus 16 ~~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~-------~~~ 87 (355)
T TIGR00896 16 LTSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SA-------PGT 87 (355)
T ss_pred cccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-Hh-------ccH
Confidence 346788899999999999999999766666665 568999999999999999999998877776554 22 567
Q ss_pred HHHHHHHHHHhhhhhhhhhhhHhHHhhcCCCceeehhHHHHHhhhhHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHH
Q 007665 120 WQMCLYICIGANSQNFANTGSLVTCVKNFPESRGMMLGLMKGFVGLSGAVFTQIYLAIYGNDAKSMILLIAWLPALVSLV 199 (594)
Q Consensus 120 ~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp~~rg~~~gi~~~~~glg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~l~ 199 (594)
+.+++.|++.|+|.+...+.....+.+++|++|++++|+...+.++|..+++.+...+.+..
T Consensus 88 ~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~------------------ 149 (355)
T TIGR00896 88 ALLFAGTALIGVGIAIINVLLPSLIKRDFPQRVGLMTGLYSMALMGGAALAAAATVPLAQHS------------------ 149 (355)
T ss_pred HHHHHHHHHHHHHHHHHhccchHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh------------------
Confidence 88889999999999988777777888999989999999999988888888776554332210
Q ss_pred HHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHHhhhhcchhhhhhhhhhhhcC
Q 007665 200 FVYTIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCIFVFLPLFIAFREEFAAWQQR 279 (594)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (594)
...||..|...... ..+.. . ....+. +
T Consensus 150 ------------~~~w~~~f~~~~~~---~~~~~--------------------------~------~~~~~~------~ 176 (355)
T TIGR00896 150 ------------GGHWQQALAWWALP---ALLAL--------------------------L------AWIPQV------R 176 (355)
T ss_pred ------------hhhHHHHHHHHHHH---HHHHH--------------------------H------HHhhhh------c
Confidence 11355555411110 00000 0 000000 0
Q ss_pred CCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCCCCCccHHHhhchHHHHHHHH
Q 007665 280 KQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKRGEDYGILQALLSIDMLILFL 359 (594)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 359 (594)
+ +++ + + .+.+ +...++.+|+|.+|.+.+
T Consensus 177 ~---~~~------~------------------------~---------------~~~~----~~~~~~~~~~~~~~~~~~ 204 (355)
T TIGR00896 177 R---RVA------A------------------------N---------------QTTT----RLTPVRIWRSPLAWQVTV 204 (355)
T ss_pred c---ccC------C------------------------C---------------CCCC----CCCCchhhcCHhHHHHHH
Confidence 0 000 0 0 0000 012245678888887666
Q ss_pred HHHhhccccceeeccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHH
Q 007665 360 ATFCGLGCSLTAIDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVL 439 (594)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~ 439 (594)
..++.....+....++|.++++.|+|..+++...++..++.++++++.|++.||+++|+ ..+..+.++.+++.+.
T Consensus 205 ~~~~~~~~~~~~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~-----~~~~~~~~~~~~~~~~ 279 (355)
T TIGR00896 205 FFGLQSGLYYSLIGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQR-----GIVAVLAVLQLVGLCG 279 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccch-----HHHHHHHHHHHHHHHH
Confidence 55554445555567789999889999999999999999999999999999999995442 3444555555555554
Q ss_pred HhccCcchHHHHHHHHHHHhhhhHHHHHHHHHHhcc-CCccccccchhhccchhhhhhhhhhHHHhhhhH
Q 007665 440 IAFPKPGSVYVASLLVGFSYGAQLTLLFIIISELFG-LKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDR 508 (594)
Q Consensus 440 ~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~ 508 (594)
+............++.|++.+..++...+.+.+..+ +++++..+|+.+....+++.+ +|.+.|.+.|.
T Consensus 280 ~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-gp~~~G~l~~~ 348 (355)
T TIGR00896 280 LLFAPMHGLWAWALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAAL-GPLFVGVLHDI 348 (355)
T ss_pred HHHhhhhHHHHHHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 443322222335678899999888887776665554 567788899988888888765 99999999988
No 46
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.95 E-value=7.4e-26 Score=237.87 Aligned_cols=372 Identities=11% Similarity=-0.014 Sum_probs=248.0
Q ss_pred chhhhHHHHHHHhCCCHhHHHHHHHHHhhhh-hhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHH
Q 007665 43 LFGTYSKEIKSTLGYDQTTLNLLSTCKDLGA-NVGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIAKPKVWQ 121 (594)
Q Consensus 43 ~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~~~~~~ 121 (594)
......|.+.++++.+..+.+++.+...++. +.+++.|+++||+|||++++.+.++.+++.+...+. ....+++++.
T Consensus 35 ~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 112 (417)
T PRK10489 35 LLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALN--AFLPEPSLLA 112 (417)
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHH--HHcCCCcHHH
Confidence 3455678888889999999999766666665 558899999999999999999888877776654321 1112256888
Q ss_pred HHHHHHHHhhhhhhhhhhhHhHHhhcCC-CceeehhHHHHHhhhhHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHH
Q 007665 122 MCLYICIGANSQNFANTGSLVTCVKNFP-ESRGMMLGLMKGFVGLSGAVFTQIYLAIYGNDAKSMILLIAWLPALVSLVF 200 (594)
Q Consensus 122 l~~~r~l~G~g~g~~~~~~~~~i~~~fp-~~rg~~~gi~~~~~glg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~l~~ 200 (594)
+++.|+++|++.+...++....+.+++| ++|+++.++.....++|..+++.+.+.+.+..
T Consensus 113 l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~------------------- 173 (417)
T PRK10489 113 IYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAG------------------- 173 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHH-------------------
Confidence 8899999999988888888888999997 57899999998888899988887766554322
Q ss_pred HHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHHhhhhcchhhhhhhhhhhhcCC
Q 007665 201 VYTIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCIFVFLPLFIAFREEFAAWQQRK 280 (594)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (594)
+|++.|...... ..+.. +. .+..++.
T Consensus 174 -------------~~~~~~~~~~~~---~~~~~------------------------~~------~~~l~~~-------- 199 (417)
T PRK10489 174 -------------GVAWNYGLAAAG---TFITL------------------------LP------LLRLPAL-------- 199 (417)
T ss_pred -------------hhHHHHHHHHHH---HHHHH------------------------HH------HHhCCCC--------
Confidence 334333310000 00000 00 0000000
Q ss_pred CCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCCCCCccHHHhhchHHHHHHHHH
Q 007665 281 QPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKRGEDYGILQALLSIDMLILFLA 360 (594)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 360 (594)
++.. ++ .+++.......++..+++|.++...+.
T Consensus 200 ----~~~~---~~----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (417)
T PRK10489 200 ----PPPP---QP----------------------------------------REHPLRSLLAGFRFLLASPVVGGIALL 232 (417)
T ss_pred ----CCCC---cc----------------------------------------cccchHHHHHHHHHHHcChHHHHHHHH
Confidence 0000 00 000000001123456777777655444
Q ss_pred HHhhccccceeeccHHHHHHh-cCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHH
Q 007665 361 TFCGLGCSLTAIDNLGQIGES-LGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVL 439 (594)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~-~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~ 439 (594)
.++... ......+.|.+.++ .|+++.+.+.+.+...++..++.++.+++.||.+++ ..+..+.++.++++++
T Consensus 233 ~~~~~~-~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~------~~l~~~~~~~~~~~~~ 305 (417)
T PRK10489 233 GGLLTM-ASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPG------LLMLLSTLGSFLAVGL 305 (417)
T ss_pred HHHHHH-HHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcc------hHHHHHHHHHHHHHHH
Confidence 333222 22344567888887 799999999999999999999999999999874332 3445555555566555
Q ss_pred HhccCc-chHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhh
Q 007665 440 IAFPKP-GSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKG 518 (594)
Q Consensus 440 ~~~~~~-~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~ 518 (594)
+...+. ....+..++.|++.+...+...++..+.+|++++|+++|+.+....+|..+ ||.+.|.+.|.
T Consensus 306 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~-g~~l~G~l~~~---------- 374 (417)
T PRK10489 306 FGLMPMWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAI-GAALLGGLGAM---------- 374 (417)
T ss_pred HHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhH-HHHHHHHHHHH----------
Confidence 543332 334556677888877766777788899999999999999999999999876 99999999987
Q ss_pred cccccCCCcccccccchHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhH
Q 007665 519 MTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFILVMRTRRYYSGDI 568 (594)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (594)
.++...+...+++.++..++.....++.|+.+++++
T Consensus 375 --------------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (417)
T PRK10489 375 --------------MTPVASASASGFGLLIIGVLLLLVLGELRRFRQTPP 410 (417)
T ss_pred --------------hchhhHHHHHHHHHHHHHHHHHHhcccccccccccc
Confidence 567777777776666665555555556655444443
No 47
>TIGR00895 2A0115 benzoate transport.
Probab=99.95 E-value=6.1e-26 Score=236.70 Aligned_cols=377 Identities=17% Similarity=0.146 Sum_probs=239.5
Q ss_pred hhhHHHHHHHHHHHHhhh-hhhchhhhHHHHHHHhCCCHhHHHHHHHHHhhhh-hhhhhhhhhhcccCchHHHHHHHHHH
Q 007665 22 RGRWFMMFASFLIMAGAG-ATYLFGTYSKEIKSTLGYDQTTLNLLSTCKDLGA-NVGVLSGLLAEVTPPWLVLLVGSAMN 99 (594)
Q Consensus 22 ~~~w~~~~~~~l~~~~~g-~~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr~G~r~v~~~g~~l~ 99 (594)
+++|..+..+++..+..+ ....++.+.|.+.+++|.+..+.+++.+...++. +..++.|+++||+|||+++..+.++.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~ 92 (398)
T TIGR00895 13 RYQWRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLF 92 (398)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHH
Confidence 345656555555555544 4566778899999999999999999666665655 55889999999999999999999988
Q ss_pred HHHHHHHHHHHhhccCChhHHHHHHHHHHHhhhhhhhhhhhHhHHhhcCC-CceeehhHHHHHhhhhHHHHHHHHHHHHh
Q 007665 100 FGGYFMIWLAVMKKIAKPKVWQMCLYICIGANSQNFANTGSLVTCVKNFP-ESRGMMLGLMKGFVGLSGAVFTQIYLAIY 178 (594)
Q Consensus 100 ~ig~~l~~~a~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp-~~rg~~~gi~~~~~glg~~i~~~l~~~l~ 178 (594)
.++.+++.++ ++++.+++.|++.|++.+..++....++.|++| ++|+++.|+...+..+|..+++.+.+.+.
T Consensus 93 ~~~~~~~~~~-------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 165 (398)
T TIGR00895 93 SVFTLLCALA-------TNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLI 165 (398)
T ss_pred HHHHHHHHHc-------cchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHh
Confidence 8887776543 678888899999999999999999999999998 57999999999999999999887776655
Q ss_pred CCChHHHHHHHH-HHHHHHHHHHHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHH
Q 007665 179 GNDAKSMILLIA-WLPALVSLVFVYTIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAV 257 (594)
Q Consensus 179 ~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (594)
+..+|+..+++. ..+.+..++...+.
T Consensus 166 ~~~g~~~~~~~~~~~~~~~~~~~~~~~----------------------------------------------------- 192 (398)
T TIGR00895 166 PVFGWRSLFYVGGIAPLLLLLLLMRFL----------------------------------------------------- 192 (398)
T ss_pred hcccceeehhhhhhHHHHHHHHHHHhC-----------------------------------------------------
Confidence 443333222222 11111111111111
Q ss_pred HHhhhhcchhhhhhhhhhhhcCCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCC
Q 007665 258 CIFVFLPLFIAFREEFAAWQQRKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPP 337 (594)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (594)
++.+ .+..++ +++ + .+....+..++.+.+. +++. +++ ..+++
T Consensus 193 ------------~~~~-~~~~~~---~~~------~------~~~~~~~~~~~~~~~~--~~~~--~~~------~~~~~ 234 (398)
T TIGR00895 193 ------------PESI-DFLVSK---RPE------T------VRRIVNAIAPQMQAEA--QSAL--PEQ------KATQG 234 (398)
T ss_pred ------------CCCC-hHHHhc---CHH------H------HHHHHHHHHHhccccc--cccc--ccc------ccccc
Confidence 0000 000000 000 0 0000000000000000 0000 000 00000
Q ss_pred CCCCCccHHHhhc---hHHHHHHHHHHHhhccccceeeccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHH
Q 007665 338 KRGEDYGILQALL---SIDMLILFLATFCGLGCSLTAIDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEII 414 (594)
Q Consensus 338 ~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~ 414 (594)
. .....+..++ .+..+.+++..++..........+.|++.++.|+++.+++...+...++..+++++.|+++||+
T Consensus 235 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 312 (398)
T TIGR00895 235 T--KRSVFKALFQGKTARITVLLWLLYFMLLVGVYFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRL 312 (398)
T ss_pred h--hhHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 0 0001111221 2333333333333333333445567777778899999999999999999999999999999999
Q ss_pred hhhccCCchHHHHHHHHHHHHHHHHHh-ccCcchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhh
Q 007665 415 LLKYKVPRPLIMAISLILSAVGDVLIA-FPKPGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLG 493 (594)
Q Consensus 415 g~r~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg 493 (594)
++| .......+..+....+.. ..+....++..++.|++.+...+....++.|.+|+++++++.|+.+....++
T Consensus 313 ~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g 386 (398)
T TIGR00895 313 GPR------VTALLLLLGAVFAVLVGSTLFSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLG 386 (398)
T ss_pred chH------HHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHH
Confidence 876 222222222222222222 2334456667788999999999999999999999999999999999999999
Q ss_pred hhhhhhhHHHhh
Q 007665 494 SYVLNVIVVGRL 505 (594)
Q Consensus 494 ~~~~gp~~~g~l 505 (594)
+.+ +|.+.|.+
T Consensus 387 ~~~-g~~~~G~l 397 (398)
T TIGR00895 387 AII-GPILAGYL 397 (398)
T ss_pred HHH-HHHhHHhc
Confidence 876 99888875
No 48
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.94 E-value=1.3e-25 Score=231.30 Aligned_cols=340 Identities=14% Similarity=0.059 Sum_probs=236.9
Q ss_pred hhhhHHHHHHHhCCCHhHHHHHHHHHhhhh-hhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHH
Q 007665 44 FGTYSKEIKSTLGYDQTTLNLLSTCKDLGA-NVGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIAKPKVWQM 122 (594)
Q Consensus 44 ~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~~~~~~l 122 (594)
.....|.+..+++.+..+.+++.+...++. +.+++.|+++||+|||++++.+.++..++.++..++ ......+++.+
T Consensus 18 ~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 95 (365)
T TIGR00900 18 TQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFV--ALLGGLNIWQV 95 (365)
T ss_pred HHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHH--HHcCCCcHHHH
Confidence 445567788889999999999766666665 568999999999999999999998888877766544 11111278899
Q ss_pred HHHHHHHhhhhhhhhhhhHhHHhhcCC-CceeehhHHHHHhhhhHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHH
Q 007665 123 CLYICIGANSQNFANTGSLVTCVKNFP-ESRGMMLGLMKGFVGLSGAVFTQIYLAIYGNDAKSMILLIAWLPALVSLVFV 201 (594)
Q Consensus 123 ~~~r~l~G~g~g~~~~~~~~~i~~~fp-~~rg~~~gi~~~~~glg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~l~~~ 201 (594)
++.|++.|++.+...+....++.|++| ++|+++.|+...+.++|..+++.+.+.+.+..
T Consensus 96 ~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~-------------------- 155 (365)
T TIGR00900 96 YVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATL-------------------- 155 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHh--------------------
Confidence 999999999999999999999999998 57999999999999999998887665544322
Q ss_pred HHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHHhhhhcchhhhhhhhhhhhcCCC
Q 007665 202 YTIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCIFVFLPLFIAFREEFAAWQQRKQ 281 (594)
Q Consensus 202 ~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (594)
+|+..|.......+ +..+ +.+..+.+++ +
T Consensus 156 ------------g~~~~~~~~~~~~~---~~~~------------------------------~~~~~~~~~~----~-- 184 (365)
T TIGR00900 156 ------------GIKWAIWVDAVGFA---ISAL------------------------------LIVSVRIPEL----A-- 184 (365)
T ss_pred ------------hHHHHHHHHHHHHH---HHHH------------------------------HHHhcccccC----C--
Confidence 45544431111000 0000 0000110000 0
Q ss_pred CCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCCCCCccHHHhhchHHHHHHHHHH
Q 007665 282 PTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKRGEDYGILQALLSIDMLILFLAT 361 (594)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 361 (594)
+++ + + + ..++.........++.+|+|.++...+..
T Consensus 185 ---~~~-----~------------------------~-----~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (365)
T TIGR00900 185 ---ASE-----I------------------------Q-----A--------LSNAVLRDTREGIKFVLKNPLLRTLLLLA 219 (365)
T ss_pred ---Ccc-----c------------------------c-----c--------cchhHHHHHHhHHHHHHcCcHHHHHHHHH
Confidence 000 0 0 0 00000000012345677888888776665
Q ss_pred Hhhccccceee-ccHHHHHHh-cCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHH
Q 007665 362 FCGLGCSLTAI-DNLGQIGES-LGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVL 439 (594)
Q Consensus 362 ~~~~~~~~~~~-~~~~~~~~~-~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~ 439 (594)
++......... ...|.+.++ .|.++.+.+.......++..+++++.+++.||++|| ..+..+..+..++...
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~~~~~~~~~~~~~~ 293 (365)
T TIGR00900 220 LLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRM------ALMTGAIFVIGLAILV 293 (365)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchh------HHHHHHHHHHHHHHHH
Confidence 55444433333 566777775 699989999999999999999999999999998776 3444444455555444
Q ss_pred HhccC--cchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhH
Q 007665 440 IAFPK--PGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDR 508 (594)
Q Consensus 440 ~~~~~--~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~ 508 (594)
+.... .+..++..++.|++.+...+....+..|.+|++++++++|+.+....++..+ +|.+.|.+.|.
T Consensus 294 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-g~~~~g~l~~~ 363 (365)
T TIGR00900 294 VGLTPPNFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPL-GLILAGPLADH 363 (365)
T ss_pred HHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 44332 3445566788899999888888999999999999999999999999999876 99999999886
No 49
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.94 E-value=1.7e-25 Score=211.78 Aligned_cols=245 Identities=43% Similarity=0.817 Sum_probs=226.0
Q ss_pred hHHHHHHHHHHHHhhhhhhchhhhHHHHHHHhCCCHhHHHHHHHHHhhhhhhhhhhhhhhcccCchHHHHHHHHHHHHHH
Q 007665 24 RWFMMFASFLIMAGAGATYLFGTYSKEIKSTLGYDQTTLNLLSTCKDLGANVGVLSGLLAEVTPPWLVLLVGSAMNFGGY 103 (594)
Q Consensus 24 ~w~~~~~~~l~~~~~g~~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~ 103 (594)
||..++++.+++.+.|..|.|+.+.|++++.+|+|++|++.++++..+|..++++.|.+.|++|+|.++++|.+...+|+
T Consensus 1 rW~~l~a~~~v~~~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G~~~G~l~d~~gp~~~l~iG~~~~~~GY 80 (250)
T PF06813_consen 1 RWLSLVASIWVQLCSGTTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYFGILAGLLYDRFGPWVVLLIGAVLGFVGY 80 (250)
T ss_pred ChhhHHHHHHHHHhcCcccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhccHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999899999999999999999999999999999
Q ss_pred HHHHHHHhhccCChhHHHHHHHHHHHhhhhhhhhhhhHhHHhhcCCCceeehhHHHHHhhhhHHHHHHHHHHHHhCCChH
Q 007665 104 FMIWLAVMKKIAKPKVWQMCLYICIGANSQNFANTGSLVTCVKNFPESRGMMLGLMKGFVGLSGAVFTQIYLAIYGNDAK 183 (594)
Q Consensus 104 ~l~~~a~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp~~rg~~~gi~~~~~glg~~i~~~l~~~l~~~~~~ 183 (594)
.+.++++.+.+..++++.++++.++.|.|.+...+++.....+.||++||++.|+..+..|+++.+...+...+.+++..
T Consensus 81 ~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~~RG~vvgilk~~~GLSaai~t~i~~~~f~~~~~ 160 (250)
T PF06813_consen 81 GLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPRSRGTVVGILKGFFGLSAAIFTQIYSAFFGDDPS 160 (250)
T ss_pred HHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCccccCceehhhhHHHHhHHHHHHHHHHHHcCCChH
Confidence 99999999988767899999999999999999889999988999999999999999999999999999999999999889
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCC----CCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHH
Q 007665 184 SMILLIAWLPALVSLVFVYTIRPLKV----SSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCI 259 (594)
Q Consensus 184 ~~~~~~~~~~~~~~l~~~~~~~~~~~----~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (594)
.+++++++.|..+.++.+.++|+.|+ .++.++++.|.....+.++++++++...+.+++.+.++..+....+++++
T Consensus 161 ~fll~la~~~~~v~l~~~~~vr~~~~~~~~~~~~~~~~~F~~~~~i~l~la~yLl~~~i~~~~~~~s~~~~~~~~~il~l 240 (250)
T PF06813_consen 161 SFLLFLAVLPAVVCLVAMFFVRPVPPSPSRTRQPSESKRFLFFFAIALALAIYLLVISILQNFVKLSRAARVIFAVILLL 240 (250)
T ss_pred HHHHHHHHHHHHHHHHHhhheeccCCccccccCcchhHHHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHH
Confidence 99999999999999999999998875 24567788888888888889999999999888888888888888888888
Q ss_pred hhhhcchhh
Q 007665 260 FVFLPLFIA 268 (594)
Q Consensus 260 ~~~~~~~~~ 268 (594)
++.+|+.++
T Consensus 241 lL~~Pl~i~ 249 (250)
T PF06813_consen 241 LLLLPLAIP 249 (250)
T ss_pred HHHhhhhcc
Confidence 888888764
No 50
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.94 E-value=5.9e-25 Score=228.43 Aligned_cols=330 Identities=16% Similarity=0.066 Sum_probs=224.3
Q ss_pred hhhchhhhHHHHHHHhCCCHhHHHHHHHHHhhhh-hhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhccCChh
Q 007665 40 ATYLFGTYSKEIKSTLGYDQTTLNLLSTCKDLGA-NVGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIAKPK 118 (594)
Q Consensus 40 ~~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~~~ 118 (594)
....+....|.+++++|.|.++.+++.+.+.++. +.+++.|++.||+|||+++..+.++..++.+++.++ ++
T Consensus 20 ~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~-------~~ 92 (385)
T TIGR00710 20 GIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALS-------NN 92 (385)
T ss_pred HHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHH-------cc
Confidence 3445556779999999999999999766666665 558899999999999999999999999888877654 67
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhHhHHhhcCC-CceeehhHHHHHhhhhHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHH
Q 007665 119 VWQMCLYICIGANSQNFANTGSLVTCVKNFP-ESRGMMLGLMKGFVGLSGAVFTQIYLAIYGNDAKSMILLIAWLPALVS 197 (594)
Q Consensus 119 ~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp-~~rg~~~gi~~~~~glg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 197 (594)
++.+++.|++.|++.+...+....++.|++| ++|+++.|+......+|..+++.+.+.+.+.
T Consensus 93 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~----------------- 155 (385)
T TIGR00710 93 IETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVW----------------- 155 (385)
T ss_pred HHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------
Confidence 8888999999999999999999999999998 5699999999999999988887766554332
Q ss_pred HHHHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHHhhhhcchhhhhhhhhhhh
Q 007665 198 LVFVYTIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCIFVFLPLFIAFREEFAAWQ 277 (594)
Q Consensus 198 l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (594)
.+|+..+.......+...+. ..+..+++ +
T Consensus 156 ---------------~~~~~~~~~~~~~~~~~~~~--------------------------------~~~~~~~~-~--- 184 (385)
T TIGR00710 156 ---------------LSWHAIFAFLSLAGILLSAL--------------------------------IFFILPET-L--- 184 (385)
T ss_pred ---------------cCHHHHHHHHHHHHHHHHHH--------------------------------HHHhCCCC-C---
Confidence 24555444111110000000 00000000 0
Q ss_pred cCCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCCCCCccHHHhhchHHHHHH
Q 007665 278 QRKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKRGEDYGILQALLSIDMLIL 357 (594)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 357 (594)
++ + + +++........++.+|++.+|..
T Consensus 185 -------~~------~------------------------~----------------~~~~~~~~~~~~~~~~~~~~~~~ 211 (385)
T TIGR00710 185 -------PY------E------------------------A----------------RIQISTYFETFLLLLKSKMFWGY 211 (385)
T ss_pred -------CC------c------------------------c----------------cCCHHHHHHHHHHHHcCchhHHH
Confidence 00 0 0 00000001234567788888876
Q ss_pred HHHHHhhccccceeeccHHHHHH-hcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHH
Q 007665 358 FLATFCGLGCSLTAIDNLGQIGE-SLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVG 436 (594)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~ 436 (594)
.+..............+.|.+++ ..|+++.+.+...+...++..+++++.|++.||+++|+ .+..+.++..++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~------~~~~~~~~~~~~ 285 (385)
T TIGR00710 212 ALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKS------LLRMGLILFAVS 285 (385)
T ss_pred HHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH------HHHHHHHHHHHH
Confidence 66554444333444455676665 67999999999999999999999999999999998874 233344444443
Q ss_pred HHHHhc---c--Cc-chHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhh
Q 007665 437 DVLIAF---P--KP-GSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRL 505 (594)
Q Consensus 437 ~~~~~~---~--~~-~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l 505 (594)
.+++.. . .. .......++.|++.+...+.......|.+| ++++++.++.+.....++.+.+| +.+.+
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~-~~~~~ 358 (385)
T TIGR00710 286 AVLLEITAILGLGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGY-LVSLI 358 (385)
T ss_pred HHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHH-HHHhc
Confidence 333221 1 11 223344567788888888888888888876 67899999988777665555455 55533
No 51
>TIGR00898 2A0119 cation transport protein.
Probab=99.94 E-value=9.3e-26 Score=243.28 Aligned_cols=387 Identities=15% Similarity=0.167 Sum_probs=241.0
Q ss_pred hchhhhHHHHHHHhCCC---HhHHHHHHHHHhhhhh-hhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhccCCh
Q 007665 42 YLFGTYSKEIKSTLGYD---QTTLNLLSTCKDLGAN-VGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIAKP 117 (594)
Q Consensus 42 ~~~~~~~~~l~~~~~~s---~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~~ 117 (594)
|.++.+.|.+.+|++++ ..+.+++.+.+.++.. ..++.|+++||+|||++++++.++..++.++++++ +
T Consensus 106 ~~~~~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~-------~ 178 (505)
T TIGR00898 106 YSYDTFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFS-------P 178 (505)
T ss_pred ecCCcccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHc-------c
Confidence 34446778899999999 8999997777777764 58899999999999999999999998888777654 7
Q ss_pred hHHHHHHHHHHHhhhhhhhhhhhHhHHhhcCC-CceeehhHHHHHhhhhHHHHHHHHHHHHhCCChHHHHHHHHHHHHHH
Q 007665 118 KVWQMCLYICIGANSQNFANTGSLVTCVKNFP-ESRGMMLGLMKGFVGLSGAVFTQIYLAIYGNDAKSMILLIAWLPALV 196 (594)
Q Consensus 118 ~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp-~~rg~~~gi~~~~~glg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~ 196 (594)
+++.+++.|++.|++.+...+....++.|++| ++|+++.++...++++|.++++.+...+.+ |++.+++...+.+.
T Consensus 179 ~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr~~~~~~~i~~~~ 255 (505)
T TIGR00898 179 NYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD---WRWLQLAVSLPTFL 255 (505)
T ss_pred cHHHHHHHHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHH
Confidence 89999999999999999999999999999997 569999999988888887776655433221 44444333333322
Q ss_pred HHHHHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHHhhhhcchhhhhhhhhhh
Q 007665 197 SLVFVYTIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCIFVFLPLFIAFREEFAAW 276 (594)
Q Consensus 197 ~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (594)
.++...+++ +.++|
T Consensus 256 ~~~~~~~~~------------------------------------------------------------------esp~~ 269 (505)
T TIGR00898 256 FFLLSWFVP------------------------------------------------------------------ESPRW 269 (505)
T ss_pred HHHHHHhcC------------------------------------------------------------------CChHH
Confidence 222221111 11111
Q ss_pred hcCCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCCCCCccHHHhhchHHHHH
Q 007665 277 QQRKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKRGEDYGILQALLSIDMLI 356 (594)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 356 (594)
...+.+.++. +....+..+++..+...+....+.+ + ..+++ .+..+.++++++|.++.
T Consensus 270 l~~~~~~~~a--------------~~~l~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~--~~~~~~~~l~~~~~~~~ 327 (505)
T TIGR00898 270 LISQGRIEEA--------------LKILQRIAKINGKKLPAEVLSLSLE-----K-DLSSS--KKQYSFLDLFRTPNLRK 327 (505)
T ss_pred HHHCCCHHHH--------------HHHHHHHHHHcCCCCCHHHHhhhhh-----h-hhhhc--cCCCcHHHHhCChHHHH
Confidence 1100000000 0000000000000000000000000 0 00000 01245688899998877
Q ss_pred HHHHHHhhccccceeeccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHH
Q 007665 357 LFLATFCGLGCSLTAIDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVG 436 (594)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~ 436 (594)
..+...+.+.......+..+.+.+..+.+ ......+.++..+++.++.+++.||+|||. .+.++.++.+++
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~i~~~~~~~~l~dr~grr~------~~~~~~~~~~~~ 398 (505)
T TIGR00898 328 TTLCLMMLWFTTAFSYYGLVLDLGNLGGN---IYLDLFISGLVELPAKLITLLLIDRLGRRY------TMAASLLLAGVA 398 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccccCCC---hHHHHHHHHHHHHHHHHHHHHHHHHhCCHH------HHHHHHHHHHHH
Confidence 65554433222111111222223333433 223345667788899999999999998873 455555555555
Q ss_pred HHHHhcc-Cc--chHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHh
Q 007665 437 DVLIAFP-KP--GSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQ 513 (594)
Q Consensus 437 ~~~~~~~-~~--~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~ 513 (594)
.+++... +. .......++.+++.+..++..+.+.+|.+|++.|+++.|+.+....+|+++ +|++.+ +.+.
T Consensus 399 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i-~p~i~~-~~~~----- 471 (505)
T TIGR00898 399 LLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSII-SPFLVY-LGEK----- 471 (505)
T ss_pred HHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHH-HhHHHH-HHHH-----
Confidence 5544432 22 233444556667777788888899999999999999999999999999976 898887 4332
Q ss_pred hhhhhcccccCCCcccccccchHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 007665 514 LAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFILVMRTRRY 563 (594)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 563 (594)
++...+++.+++.+++.++.+++ ++++++
T Consensus 472 --------------------~~~~~~~~~~~~~~~~~~~~~~l-pet~~~ 500 (505)
T TIGR00898 472 --------------------WLFLPLVLFGGLALLAGILTLFL-PETKGV 500 (505)
T ss_pred --------------------HHhhHHHHHHHHHHHHHHHHHcC-cCCCCC
Confidence 35667788887777777666554 455543
No 52
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.94 E-value=1.8e-24 Score=225.53 Aligned_cols=363 Identities=11% Similarity=0.028 Sum_probs=237.6
Q ss_pred HHhhhhh-hchhhhHHHHHHHhCCCHhHHHHHHHHHhhhh-hhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhh
Q 007665 35 MAGAGAT-YLFGTYSKEIKSTLGYDQTTLNLLSTCKDLGA-NVGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMK 112 (594)
Q Consensus 35 ~~~~g~~-~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~ 112 (594)
.+..|.. ...+.+.|.+++++|+|..+.+++.+...++. +.+++.|++.||+|||+++++|.++++++.+++..+ .
T Consensus 12 f~~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~--~ 89 (410)
T TIGR00885 12 FALWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPA--A 89 (410)
T ss_pred HHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH--H
Confidence 3444533 34468889999999999999999766666665 568999999999999999999999999998775332 1
Q ss_pred ccCChhHHHHHHHHHHHhhhhhhhhhhhHhHHhhcCC-CceeehhHHHHHhhhhHHHHHHHHHHHHhCCCh--HHHHHHH
Q 007665 113 KIAKPKVWQMCLYICIGANSQNFANTGSLVTCVKNFP-ESRGMMLGLMKGFVGLSGAVFTQIYLAIYGNDA--KSMILLI 189 (594)
Q Consensus 113 ~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp-~~rg~~~gi~~~~~glg~~i~~~l~~~l~~~~~--~~~~~~~ 189 (594)
..++++.+++.|++.|+|.|...+....++.+..| ++|++.+++.+...++|..+++.+...+..... +......
T Consensus 90 --~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~ 167 (410)
T TIGR00885 90 --EIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLD 167 (410)
T ss_pred --hhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhh
Confidence 11578889999999999999999988888888887 568999999999999999999877765542210 0000000
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHHhhhhcchhhh
Q 007665 190 AWLPALVSLVFVYTIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCIFVFLPLFIAF 269 (594)
Q Consensus 190 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (594)
...+...... ......+||.+|.....+.+. ..+. +..
T Consensus 168 ~~~~~~~~~~--------~~~~~~~w~~~fl~~a~~~~~---~~~~-------------------------------~~~ 205 (410)
T TIGR00885 168 KLSPEELSAI--------KHSDLASVQTPYMIIGAVVLA---VALL-------------------------------IML 205 (410)
T ss_pred hcCHHHHHHH--------HHHHHHHHHHHHHHHHHHHHH---HHHH-------------------------------HHH
Confidence 0000000000 000013577777622211110 0000 000
Q ss_pred hhhhhhhhcCCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCCCCCccHHHhh
Q 007665 270 REEFAAWQQRKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKRGEDYGILQAL 349 (594)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 349 (594)
.+. ++ .+. + + ..++ ......++.+
T Consensus 206 ~~~------p~----~~~-----~------------------------~--------------~~~~---~~~~~~~~~~ 229 (410)
T TIGR00885 206 TKM------PA----LNH-----S------------------------D--------------AKQI---SFSASLSRLA 229 (410)
T ss_pred hcC------CC----CCc-----c------------------------c--------------cccc---cchhhHHHHH
Confidence 000 00 000 0 0 0000 0001235678
Q ss_pred chHHHHHHHHHHHhhccccceeeccHHHHHHhc--CCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHH
Q 007665 350 LSIDMLILFLATFCGLGCSLTAIDNLGQIGESL--GYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMA 427 (594)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~ 427 (594)
|+|.++...+..++..+.......+++.+.++. +.+...++...+.+..+..+||++++++.||+++|+ .+.
T Consensus 230 ~~~~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~------~l~ 303 (410)
T TIGR00885 230 RIRHYREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHK------VLM 303 (410)
T ss_pred hChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH------HHH
Confidence 889888877777777666666667778887765 344445566677777889999999999999997763 455
Q ss_pred HHHHHHHHHHHHHhccCcchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhh
Q 007665 428 ISLILSAVGDVLIAFPKPGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYD 507 (594)
Q Consensus 428 ~~~~~~~i~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~ 507 (594)
++.++.++..++....+........++.|++.+..||...+...+..+++....+.++.... +|+.+ .|++.|.+.|
T Consensus 304 i~~~~~~~~~ll~~~~~~~~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~~--~Gga~-~p~l~G~~~d 380 (410)
T TIGR00885 304 AYAIIGMALCLGSIFAGGHVGLYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMAI--IGGGI-VPPLQGFIID 380 (410)
T ss_pred HHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHH--hccch-HHHHHHHHHH
Confidence 55555555555544444434456678889999999999999999999866554444544433 78776 7999999999
Q ss_pred H
Q 007665 508 R 508 (594)
Q Consensus 508 ~ 508 (594)
.
T Consensus 381 ~ 381 (410)
T TIGR00885 381 M 381 (410)
T ss_pred H
Confidence 6
No 53
>PRK11043 putative transporter; Provisional
Probab=99.94 E-value=1.9e-24 Score=226.05 Aligned_cols=347 Identities=14% Similarity=0.044 Sum_probs=227.7
Q ss_pred HHHHHHHHHHHHhhhhhhchhhhHHHHHHHhCCCHhHHHHHHHHHhhhh-hhhhhhhhhhcccCchHHHHHHHHHHHHHH
Q 007665 25 WFMMFASFLIMAGAGATYLFGTYSKEIKSTLGYDQTTLNLLSTCKDLGA-NVGVLSGLLAEVTPPWLVLLVGSAMNFGGY 103 (594)
Q Consensus 25 w~~~~~~~l~~~~~g~~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~ 103 (594)
+.++...++..........+....|++++++|.++++.+++.+.+.++. +.++++|+++||+|||+++..+.++..++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 85 (401)
T PRK11043 6 GFLVYLAGLSMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGS 85 (401)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHH
Confidence 3333433343333334455566678889999999999999666666665 568899999999999999999999888887
Q ss_pred HHHHHHHhhccCChhHHHHHHHHHHHhhhhhhhhhhhHhHHhhcCCC-ceeehhHHHHHhhhhHHHHHHHHHHHHhCCCh
Q 007665 104 FMIWLAVMKKIAKPKVWQMCLYICIGANSQNFANTGSLVTCVKNFPE-SRGMMLGLMKGFVGLSGAVFTQIYLAIYGNDA 182 (594)
Q Consensus 104 ~l~~~a~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp~-~rg~~~gi~~~~~glg~~i~~~l~~~l~~~~~ 182 (594)
+++.++ ++++.+++.|+++|++.+...+.....+.+++|+ +++++.+......+++..+++.+.+.+.+.
T Consensus 86 ~~~~~~-------~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~-- 156 (401)
T PRK11043 86 LGMLWV-------ESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNH-- 156 (401)
T ss_pred HHHHHh-------cCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--
Confidence 776544 6788999999999999888777777888999985 578888888777778888887666554432
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHHhhh
Q 007665 183 KSMILLIAWLPALVSLVFVYTIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCIFVF 262 (594)
Q Consensus 183 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (594)
.+|+..|.......+...+.
T Consensus 157 ------------------------------~g~~~~~~~~~~~~~~~~~~------------------------------ 176 (401)
T PRK11043 157 ------------------------------FGWQAIFATLFAITLLLILP------------------------------ 176 (401)
T ss_pred ------------------------------CChHHHHHHHHHHHHHHHHH------------------------------
Confidence 35555544111110000000
Q ss_pred hcchhhhhhhhhhhhcCCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCCCCC
Q 007665 263 LPLFIAFREEFAAWQQRKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKRGED 342 (594)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (594)
.+..+++ ++ + + +++ .++
T Consensus 177 ---~~~~~~~------------~~------~------------------------~---------------~~~---~~~ 193 (401)
T PRK11043 177 ---TLRLKPS------------KK------A------------------------R---------------KQS---QDA 193 (401)
T ss_pred ---HHHcCCC------------CC------c------------------------c---------------ccc---hHH
Confidence 0001100 00 0 0 000 011
Q ss_pred ccHHHhhchHHHHHHHHHHHhhccccceeeccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCc
Q 007665 343 YGILQALLSIDMLILFLATFCGLGCSLTAIDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPR 422 (594)
Q Consensus 343 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~ 422 (594)
...++.+|+|.+|...+...+.......+..+.|.+.++.|+++.+.+.......++..+|+++.+++.||+++|+.
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~--- 270 (401)
T PRK11043 194 LTFKQLLKSKTYLGNVLIFAACSAAFFAWLTGSPFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQL--- 270 (401)
T ss_pred HHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHH---
Confidence 24567788888876554444333333444556788888889999888888888888999999999999999987641
Q ss_pred hHHHHHHHHHHHHHHHHHhc--c-CcchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhh
Q 007665 423 PLIMAISLILSAVGDVLIAF--P-KPGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNV 499 (594)
Q Consensus 423 ~~~~~~~~~~~~i~~~~~~~--~-~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp 499 (594)
.........+..+.+..... . +.....+...+.|++.+..++.......+..| +++|++.|+.++....++.. ++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~-~~ 348 (401)
T PRK11043 271 LPWLLVLFAVSVIAIWLASLLSHPSLVPLLIPFCVMAAANGAIYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFL-AS 348 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHH-HH
Confidence 11122222222222222221 1 12233444567788888888877777777775 68999999999887777765 77
Q ss_pred hHHHhhhhH
Q 007665 500 IVVGRLYDR 508 (594)
Q Consensus 500 ~~~g~l~~~ 508 (594)
.+.|.+.|.
T Consensus 349 ~~~g~l~~~ 357 (401)
T PRK11043 349 LLVSALIST 357 (401)
T ss_pred HHHHHccCC
Confidence 788888765
No 54
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.94 E-value=2.9e-24 Score=223.90 Aligned_cols=343 Identities=12% Similarity=0.123 Sum_probs=227.4
Q ss_pred HHHHHHHHHHHHhhhhhhchhhhHHHHHHHhCCCHhHHHHHHHHHh-hhhhhhhhhhhhhcccCchHHHHHHHHHHHHHH
Q 007665 25 WFMMFASFLIMAGAGATYLFGTYSKEIKSTLGYDQTTLNLLSTCKD-LGANVGVLSGLLAEVTPPWLVLLVGSAMNFGGY 103 (594)
Q Consensus 25 w~~~~~~~l~~~~~g~~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~-~~~~~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~ 103 (594)
++.+...++..... ...++.+.+.+++++|.|..+++++..... ...+.+++.|+++||+|||+++..+.++..++.
T Consensus 13 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~ 90 (400)
T PRK11646 13 YFLLIDNMLVVLGF--FVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGF 90 (400)
T ss_pred HHHHHHHHHHHHHH--HHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHH
Confidence 55555444443332 334666666788999999999999555544 444668999999999999999999999999988
Q ss_pred HHHHHHHhhccCChhHHHHHHHHHHHhhhhhhhhhhhHhHHhhcCC-CceeehhHHHHHhhhhHHHHHHHHHHHHhCCCh
Q 007665 104 FMIWLAVMKKIAKPKVWQMCLYICIGANSQNFANTGSLVTCVKNFP-ESRGMMLGLMKGFVGLSGAVFTQIYLAIYGNDA 182 (594)
Q Consensus 104 ~l~~~a~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp-~~rg~~~gi~~~~~glg~~i~~~l~~~l~~~~~ 182 (594)
+++.+. ++++.+++.|+++|++.+...+...+.+.+++| ++|+++.|+......+|..+++.+.+.+. ..
T Consensus 91 ~~~~~~-------~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~- 161 (400)
T PRK11646 91 ATMAIA-------HEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QY- 161 (400)
T ss_pred HHHHHh-------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hh-
Confidence 876544 678888999999999998888888888999997 58999999999999999999887766543 21
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHHhhh
Q 007665 183 KSMILLIAWLPALVSLVFVYTIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCIFVF 262 (594)
Q Consensus 183 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (594)
+|+..|.......+...+..
T Consensus 162 -------------------------------g~~~~f~~~~~~~~~~~i~~----------------------------- 181 (400)
T PRK11646 162 -------------------------------DFRLVCATGAVLFVLAAAFN----------------------------- 181 (400)
T ss_pred -------------------------------hHHHHHHHHHHHHHHHHHHH-----------------------------
Confidence 44444431111000000000
Q ss_pred hcchhhhhhhhhhhhcCCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCCCCC
Q 007665 263 LPLFIAFREEFAAWQQRKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKRGED 342 (594)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (594)
.+..+ +. + ++ + .+++ ..
T Consensus 182 ---~~~~~-~~-----~-----~~-------------------------------~---------------~~~~---~~ 198 (400)
T PRK11646 182 ---AWLLP-AY-----K-----LS-------------------------------T---------------VRTP---VR 198 (400)
T ss_pred ---HHhCC-cc-----c-----cc-------------------------------c---------------cchh---hH
Confidence 00000 00 0 00 0 0000 01
Q ss_pred ccHHHhhchHHHHHHHHHHHhhccccceeeccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHH-HhhhccCC
Q 007665 343 YGILQALLSIDMLILFLATFCGLGCSLTAIDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEI-ILLKYKVP 421 (594)
Q Consensus 343 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr-~g~r~~~~ 421 (594)
..+++.+++|.++...+..+...........+.|.+.++.+.++.+.+.+.++..+....+....+.+.|| ++.+
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~---- 274 (400)
T PRK11646 199 EGMTRVLRDKRFVTYVLTLTGYYMLAVQVMLMLPIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLE---- 274 (400)
T ss_pred HHHHHHHcCchHHHHHHHHHHHHHHHHHHHHhhhhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchh----
Confidence 23466778888776544433322222223345788888876677778887777777666555444555554 3322
Q ss_pred chHHHHHHHHHHHHHHHHHhccC-cchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhh
Q 007665 422 RPLIMAISLILSAVGDVLIAFPK-PGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVI 500 (594)
Q Consensus 422 ~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~ 500 (594)
..+..+.++.+++.+++...+ .....+..++.+++.+...+...+++.+..|++++|+++|+.+....+|..+ ||.
T Consensus 275 --~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~i-g~~ 351 (400)
T PRK11646 275 --HRLMAGLLIMSLSMFPIGMVSNLQQLFTLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAI-GYI 351 (400)
T ss_pred --HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHh-ccc
Confidence 223455555556555544333 2334445567788888777888899999999999999999999999999876 999
Q ss_pred HHHhhhhH
Q 007665 501 VVGRLYDR 508 (594)
Q Consensus 501 ~~g~l~~~ 508 (594)
+.|.++|.
T Consensus 352 l~G~l~~~ 359 (400)
T PRK11646 352 GGGWLFDL 359 (400)
T ss_pred chHHHHHH
Confidence 99999987
No 55
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.94 E-value=5.2e-24 Score=223.29 Aligned_cols=354 Identities=15% Similarity=0.127 Sum_probs=229.6
Q ss_pred chhhhHHHHHHHhCCCHhHH-----HHHHHHHh-hhhhhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhccCC
Q 007665 43 LFGTYSKEIKSTLGYDQTTL-----NLLSTCKD-LGANVGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIAK 116 (594)
Q Consensus 43 ~~~~~~~~l~~~~~~s~~~~-----~~~~~~~~-~~~~~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~ 116 (594)
.+..+.|.+.+++|.+..+. +++.+... ...+.+++.|+++||+|||++++.+.++..++.+++.+.
T Consensus 32 ~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~------- 104 (408)
T PRK09874 32 LVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMGLA------- 104 (408)
T ss_pred HhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHHHHH-------
Confidence 45567888889999986553 55444444 444668999999999999999999998888887766543
Q ss_pred hhHHHHHHHHHHHhhhhhhhhhhhHhHHhhcCC-CceeehhHHHHHhhhhHHHHHHHHHHHHhCCChHHHHHHHHHHHHH
Q 007665 117 PKVWQMCLYICIGANSQNFANTGSLVTCVKNFP-ESRGMMLGLMKGFVGLSGAVFTQIYLAIYGNDAKSMILLIAWLPAL 195 (594)
Q Consensus 117 ~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp-~~rg~~~gi~~~~~glg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~ 195 (594)
++++.+++.|++.|++.+. .+.....+.+++| ++|+++.|+...+..+|..+++.+.+.+.+.
T Consensus 105 ~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~--------------- 168 (408)
T PRK09874 105 QNIWQFLILRALLGLLGGF-VPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADS--------------- 168 (408)
T ss_pred hhHHHHHHHHHHHHHhhhh-HHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------
Confidence 6788899999999998664 5666677888887 5799999999888888888887666554332
Q ss_pred HHHHHHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHHhhhhcchhhhhhhhhh
Q 007665 196 VSLVFVYTIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCIFVFLPLFIAFREEFAA 275 (594)
Q Consensus 196 ~~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (594)
.+|+..|.....+.+. ..+ ......+++.
T Consensus 169 -----------------~~~~~~~~~~~~~~~~---~~~-----------------------------~~~~~~~~~~-- 197 (408)
T PRK09874 169 -----------------YGLRPVFFITASVLFL---CFL-----------------------------VTLFCIRENF-- 197 (408)
T ss_pred -----------------hCHHHHHHHHHHHHHH---HHH-----------------------------HHHHHhccCc--
Confidence 2455444411111000 000 0000011000
Q ss_pred hhcCCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCCCCCccHHHhhchHHHH
Q 007665 276 WQQRKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKRGEDYGILQALLSIDML 355 (594)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 355 (594)
++. + + .++ .+.....+.++++.++
T Consensus 198 --------~~~------~------------------------~---------------~~~---~~~~~~~~~~~~~~~~ 221 (408)
T PRK09874 198 --------QPV------S------------------------K---------------KEM---LHMREVVTSLKNPKLV 221 (408)
T ss_pred --------ccc------c------------------------c---------------hhh---hHHHHHHHhCcCCchH
Confidence 000 0 0 000 0001123445556554
Q ss_pred HHHHH-HHhhccccceeeccHHHHHHhcCCCCCc----chhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHH
Q 007665 356 ILFLA-TFCGLGCSLTAIDNLGQIGESLGYPQHT----INTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISL 430 (594)
Q Consensus 356 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~s~~~----a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~ 430 (594)
...+. .+............++.+.++.+.+..+ .+...++.+++..++++..|+++||++||+ .+..+.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~------~~~~~~ 295 (408)
T PRK09874 222 LSLFVTTLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEK------ILITAL 295 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccch------hHHHHH
Confidence 42222 2211111112233455666655433332 344556677888899999999999998773 344444
Q ss_pred HHHHHHHHHHhcc-CcchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHH
Q 007665 431 ILSAVGDVLIAFP-KPGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDRE 509 (594)
Q Consensus 431 ~~~~i~~~~~~~~-~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~ 509 (594)
.+..++.+.+... +.+.+++..++.|++.+...+...+.+.+..+++++|+.+|+.+....+|..+ ||.+.|.+.|.
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~-gp~~~G~l~~~- 373 (408)
T PRK09874 296 IFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVT-GPLMGAAISAN- 373 (408)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHh-hHHHHHHHHhh-
Confidence 4444444443332 34455566778899999888888888889999999999999999999999876 99999999887
Q ss_pred HHHhhhhhhcccccCCCcccccccchHHHHHHHHHHHHHHHHHHHHHH
Q 007665 510 AMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFILV 557 (594)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 557 (594)
.+|+..|++.+++.+++.+..+...
T Consensus 374 -----------------------~g~~~~f~~~~~~~l~~~~~~~~~~ 398 (408)
T PRK09874 374 -----------------------YGFRAVFLVTAGVVLFNAVYSWNSL 398 (408)
T ss_pred -----------------------cchhHHHHHHHHHHHHHHHHHHHHH
Confidence 5799999999988888877665543
No 56
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.93 E-value=5.1e-24 Score=220.64 Aligned_cols=347 Identities=12% Similarity=0.074 Sum_probs=222.0
Q ss_pred hhHHHHHHHhCCCHhHHHHHHHHHhh-hhhhhhhhhhhhcccCchHHHHH-HHHHHHHHHHHHHHHHhhccCChhHHHHH
Q 007665 46 TYSKEIKSTLGYDQTTLNLLSTCKDL-GANVGVLSGLLAEVTPPWLVLLV-GSAMNFGGYFMIWLAVMKKIAKPKVWQMC 123 (594)
Q Consensus 46 ~~~~~l~~~~~~s~~~~~~~~~~~~~-~~~~~~~~G~l~Dr~G~r~v~~~-g~~l~~ig~~l~~~a~~~~~~~~~~~~l~ 123 (594)
.+.+.+++++|.|..+.+++.+.+.+ +.+.+++.|+++||+|||+.+++ +.++..++.++++++ ++++.++
T Consensus 19 ~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~-------~~~~~l~ 91 (375)
T TIGR00899 19 TLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAWN-------RNYFLLL 91 (375)
T ss_pred HHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHhc-------chHHHHH
Confidence 33345788999999999996555544 55679999999999999987655 445545555555433 6788888
Q ss_pred HHHHHHhhhhhhhhhhhHhHHhhcCCC-ceeeh--hHHHHHhhhhHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHH
Q 007665 124 LYICIGANSQNFANTGSLVTCVKNFPE-SRGMM--LGLMKGFVGLSGAVFTQIYLAIYGNDAKSMILLIAWLPALVSLVF 200 (594)
Q Consensus 124 ~~r~l~G~g~g~~~~~~~~~i~~~fp~-~rg~~--~gi~~~~~glg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~l~~ 200 (594)
+.|++.|.+.+...+.....+.++.|+ +|+++ .++...+.++|..+++++.+.+.+..
T Consensus 92 ~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~------------------- 152 (375)
T TIGR00899 92 VLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGF------------------- 152 (375)
T ss_pred HHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhc-------------------
Confidence 889888877777777777777787764 45543 57777777888888887766554432
Q ss_pred HHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHHhhhhcchhhhhhhhhhhhcCC
Q 007665 201 VYTIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCIFVFLPLFIAFREEFAAWQQRK 280 (594)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (594)
+|+..|.......+...+.. ....++.
T Consensus 153 -------------~~~~~f~~~~~~~~~~~~~~--------------------------------~~~~~~~-------- 179 (375)
T TIGR00899 153 -------------GFTVMFLTAALAFVLCGVLV--------------------------------WLFLPSY-------- 179 (375)
T ss_pred -------------ccHHHHHHHHHHHHHHHHHH--------------------------------HHhCCCc--------
Confidence 45554441111100000000 0001100
Q ss_pred CCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCCCCCccHHHhhchHHHHHHHHH
Q 007665 281 QPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKRGEDYGILQALLSIDMLILFLA 360 (594)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 360 (594)
++ + +++ .+ + ....++.++++.++.+...
T Consensus 180 ----~~------~------------------------~~~-------------~~-~----~~~~~~~~~~~~~~~~~~~ 207 (375)
T TIGR00899 180 ----PR------G------------------------APG-------------AL-T----RLEVRGLLASRDTRLLFVA 207 (375)
T ss_pred ----cc------C------------------------ccc-------------cc-C----cchhhhhhcCcchHHHHHH
Confidence 00 0 000 00 0 0011234556666655444
Q ss_pred HHhhccccceeeccHHHHHH-hcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHH
Q 007665 361 TFCGLGCSLTAIDNLGQIGE-SLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVL 439 (594)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~-~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~ 439 (594)
.++..........+.|.+.+ +.|.++.+.+.......+...+++++.|++.||+++|+ .+..+.++..+....
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~------~~~~~~~~~~~~~~~ 281 (375)
T TIGR00899 208 CTLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRR------LMLLAALAGVAFYTG 281 (375)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchh------HHHHHHHHHHHHHHH
Confidence 43333322223345566664 57999888888888877888889999999999998773 333343333333333
Q ss_pred Hhcc-CcchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhh
Q 007665 440 IAFP-KPGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKG 518 (594)
Q Consensus 440 ~~~~-~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~ 518 (594)
+... +.+..+...++.|++.+...+....+..|..| ++++++.|+.+....+|..+ +|.+.|.+.|.
T Consensus 282 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~-g~~~~g~~~~~---------- 349 (375)
T TIGR00899 282 LAADNSLWALLMLQLLNAIFIGILAGIGMLYFQDLMP-GRAGAATTLYTNTGRVGWII-AGSVGGILAER---------- 349 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc-chhhHHHHHHHHHHHHHHHH-HHHHHHHHHHh----------
Confidence 3222 23444455667788888877777788888887 45679999999988899875 99999999887
Q ss_pred cccccCCCcccccccchHHHHHHHHHHHHHHHHHHHH
Q 007665 519 MTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFI 555 (594)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~ 555 (594)
.+|+..|.+.+++.+++.++..+
T Consensus 350 --------------~g~~~~~~~~~~~~~~~~~~~~~ 372 (375)
T TIGR00899 350 --------------WSYHAVYWFAIVMLIVALFCLLL 372 (375)
T ss_pred --------------ccchhHHHHHHHHHHHHHHHHhe
Confidence 57999999988888777776544
No 57
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.93 E-value=3.1e-24 Score=219.53 Aligned_cols=333 Identities=23% Similarity=0.259 Sum_probs=258.4
Q ss_pred hhhchhhhHHHHHHHhCCCHhHHHHHHHHHhhhh-hhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhccCChh
Q 007665 40 ATYLFGTYSKEIKSTLGYDQTTLNLLSTCKDLGA-NVGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIAKPK 118 (594)
Q Consensus 40 ~~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~~~ 118 (594)
....++...|.+.+++|.+..+.+++.+...+.. +..++.|+++||+|||+.+..+.++..++.+++.++ ++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~-------~~ 86 (352)
T cd06174 14 DRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFA-------SS 86 (352)
T ss_pred hhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHh-------cc
Confidence 4456677788899999999999999766666665 568999999999999999999999999998877654 67
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhHhHHhhcCCC-ceeehhHHHHHhhhhHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHH
Q 007665 119 VWQMCLYICIGANSQNFANTGSLVTCVKNFPE-SRGMMLGLMKGFVGLSGAVFTQIYLAIYGNDAKSMILLIAWLPALVS 197 (594)
Q Consensus 119 ~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp~-~rg~~~gi~~~~~glg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 197 (594)
++.+++.|++.|++.+...+....++.|++|+ +|+++.++.....++|..+++.+.+.+.+..
T Consensus 87 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~---------------- 150 (352)
T cd06174 87 LWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESL---------------- 150 (352)
T ss_pred HHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHh----------------
Confidence 88899999999999999999999999999985 7999999999999999999887766554432
Q ss_pred HHHHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHHhhhhcchhhhhhhhhhhh
Q 007665 198 LVFVYTIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCIFVFLPLFIAFREEFAAWQ 277 (594)
Q Consensus 198 l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (594)
+|+..+.......+...+.. .
T Consensus 151 ----------------~~~~~~~~~~~~~~~~~~~~---------------------------------~---------- 171 (352)
T cd06174 151 ----------------GWRWLFLILAILGLLLALLL---------------------------------L---------- 171 (352)
T ss_pred ----------------hHHHHHHHHHHHHHHHHHHH---------------------------------H----------
Confidence 34444331111000000000 0
Q ss_pred cCCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCCCCCccHHHhhchHHHHHH
Q 007665 278 QRKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKRGEDYGILQALLSIDMLIL 357 (594)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 357 (594)
.+ .|.++..
T Consensus 172 ----------------------------------------------------------------------~~-~~~~~~~ 180 (352)
T cd06174 172 ----------------------------------------------------------------------FL-LRLLLLL 180 (352)
T ss_pred ----------------------------------------------------------------------HH-HHHHHHH
Confidence 00 0445555
Q ss_pred HHHHHhhccccceeeccHHHHHHhc-CCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHH
Q 007665 358 FLATFCGLGCSLTAIDNLGQIGESL-GYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVG 436 (594)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~-g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~ 436 (594)
.+..++..........+.+.+.++. +.++.+.+...+...++..+++++.+++.||++||+ ..+..+..+..++
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-----~~~~~~~~~~~i~ 255 (352)
T cd06174 181 ALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRR-----LLLLIGLLLAALG 255 (352)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-----HHHHHHHHHHHHH
Confidence 5555555555555566777777765 889999999999999999999999999999998873 1556666666666
Q ss_pred HHHHhccC-cchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhh
Q 007665 437 DVLIAFPK-PGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLA 515 (594)
Q Consensus 437 ~~~~~~~~-~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~ 515 (594)
.+.+...+ .+..++..++.|++.+...+....+..|.+|++++++.+|+.+....++..+ +|.+.|.+.|.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~i~g~l~~~------- 327 (352)
T cd06174 256 LLLLALAPSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGAL-GPLLAGLLLDT------- 327 (352)
T ss_pred HHHHHHhccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcc-------
Confidence 66555443 4556677889999999999999999999999999999999999999999976 89999999886
Q ss_pred hhhcccccCCCcccccccchHHHHHHHHHHHHHHHHHHHH
Q 007665 516 EKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFI 555 (594)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~ 555 (594)
.+|+..+++.+++.+++.+....
T Consensus 328 -----------------~~~~~~~~~~~~~~~i~~i~~~~ 350 (352)
T cd06174 328 -----------------GGYGGVFLILAALALLAALLLLL 350 (352)
T ss_pred -----------------cCcchHHHHHHHHHHHHHHHhee
Confidence 57999999999988888776543
No 58
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.93 E-value=9.8e-24 Score=203.02 Aligned_cols=372 Identities=15% Similarity=0.097 Sum_probs=270.2
Q ss_pred hHHHHHHHHHHHHhh-hhhhchhhhHHHHHHHhCCCHhHHHHHHHHHhhh-hhhhhhhhhhhcccCchHHHHHHHHHHHH
Q 007665 24 RWFMMFASFLIMAGA-GATYLFGTYSKEIKSTLGYDQTTLNLLSTCKDLG-ANVGVLSGLLAEVTPPWLVLLVGSAMNFG 101 (594)
Q Consensus 24 ~w~~~~~~~l~~~~~-g~~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~-~~~~~~~G~l~Dr~G~r~v~~~g~~l~~i 101 (594)
.|+.+....++.+.. ......++..+++++|+|.|.+..+.+++...+. +.++++..++..|+|.++.+..++++.++
T Consensus 10 ~~~li~gIvlia~NLR~~itsvgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~ 89 (395)
T COG2807 10 PLLLLAGIVLIAFNLRPAITSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAA 89 (395)
T ss_pred chHHHHHHHHHHhccchhhhhhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHH
Confidence 355555444444333 3677889999999999999999999987776554 47899999999999999999999999999
Q ss_pred HHHHHHHHHhhccCChhHHHHHHHHHHHhhhhhhhhhhhHhHHhhcCCCceeehhHHHHHhhhhHHHHHHHHHHHHhCCC
Q 007665 102 GYFMIWLAVMKKIAKPKVWQMCLYICIGANSQNFANTGSLVTCVKNFPESRGMMLGLMKGFVGLSGAVFTQIYLAIYGND 181 (594)
Q Consensus 102 g~~l~~~a~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp~~rg~~~gi~~~~~glg~~i~~~l~~~l~~~~ 181 (594)
|.++=.. .+...++..-.+.|.|.+.....-...+-++|||+-+..+|++....++|+++++.+.--+.+.
T Consensus 90 G~~iR~~--------~~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~~~~mtglYs~sl~~~aaLaa~lavpla~~- 160 (395)
T COG2807 90 GILIRSL--------GGLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKRVGLMTGLYSTSLGAGAALAAALAVPLAQH- 160 (395)
T ss_pred HHHHHhc--------ccHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccchhhHHhHHHHHHHHHHHHHhhhhhHHHHh-
Confidence 9776421 2456677888999999999988888999999999999999999999999988887544221111
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHHhh
Q 007665 182 AKSMILLIAWLPALVSLVFVYTIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCIFV 261 (594)
Q Consensus 182 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (594)
..+|+.........++. .+++
T Consensus 161 ------------------------------~~gW~~aL~~WAl~all---Al~~-------------------------- 181 (395)
T COG2807 161 ------------------------------SGGWRGALGFWALLALL---ALLI-------------------------- 181 (395)
T ss_pred ------------------------------hccHHHHHHHHHHHHHH---HHHH--------------------------
Confidence 13576664422222110 0000
Q ss_pred hhcchhhhhhhhhhhhcCCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCCCC
Q 007665 262 FLPLFIAFREEFAAWQQRKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKRGE 341 (594)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (594)
+++...+ ++ .+ . .+.+
T Consensus 182 ----WlPq~~r-----~~-----~~------~----------------------------------------~~~~---- 197 (395)
T COG2807 182 ----WLPQALR-----EQ-----AA------S----------------------------------------IATK---- 197 (395)
T ss_pred ----Hhhhccc-----cc-----cc------c----------------------------------------cccc----
Confidence 1111000 00 00 0 0000
Q ss_pred CccHHHhhchHHHHHHHHHHHhhccccceeeccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCC
Q 007665 342 DYGILQALLSIDMLILFLATFCGLGCSLTAIDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVP 421 (594)
Q Consensus 342 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~ 421 (594)
..+...++|+|.-|.+.+.+.++...++..+.|+|.++.++|+|+.+++.+.+...+.+....+...++.+|...+
T Consensus 198 ~~~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~---- 273 (395)
T COG2807 198 LVSVRKVWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQ---- 273 (395)
T ss_pred cccccccccCchhHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhccc----
Confidence 0111457899999999999999999999999999999999999999999999999999999999999999985443
Q ss_pred chHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHhhhhHHHHHHHHHHhcc-CCccccccchhhccchhhhhhhhhh
Q 007665 422 RPLIMAISLILSAVGDVLIAFPKPGSVYVASLLVGFSYGAQLTLLFIIISELFG-LKYYSTLFNCGQLASPLGSYVLNVI 500 (594)
Q Consensus 422 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~lg~~~~gp~ 500 (594)
+.+......++.++++-+.+......+...+++|+|.|..|+..-..+.+... ++..+.-+|+.+..+.+-... ||.
T Consensus 274 -r~~~~~~~~~~l~G~~G~~~~P~~~~~lw~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~-GP~ 351 (395)
T COG2807 274 -RPLVVLALLLMLVGLVGLLLAPGQLPILWALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAF-GPW 351 (395)
T ss_pred -chHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhh-hhh
Confidence 35566666666666665544433333334689999999999988887776654 556777777777666555544 999
Q ss_pred HHHhhhhHHHHHhhhhhhcccccCCCcccccccchHHHHHHHHHHHHHHHHHHHHH
Q 007665 501 VVGRLYDREAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFIL 556 (594)
Q Consensus 501 ~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 556 (594)
++|+++|. +++|+...+....+.++..+..+..
T Consensus 352 l~G~lhDa-----------------------~gsw~~~~~~l~~~~i~m~i~Gl~a 384 (395)
T COG2807 352 LFGFLHDA-----------------------TGSWSAPLVLLALATLLMLIFGLRA 384 (395)
T ss_pred hHhHHHHh-----------------------cCChHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999 5899999888877666555544433
No 59
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.93 E-value=1e-23 Score=220.67 Aligned_cols=356 Identities=12% Similarity=-0.007 Sum_probs=219.7
Q ss_pred hhhHHHHHHHHHHHHhh--hhhhchhhhHHHHHHHhCCCHhHHHHHHHHHhhh-hhhhhhhhhhhcccCchHHHHHHHHH
Q 007665 22 RGRWFMMFASFLIMAGA--GATYLFGTYSKEIKSTLGYDQTTLNLLSTCKDLG-ANVGVLSGLLAEVTPPWLVLLVGSAM 98 (594)
Q Consensus 22 ~~~w~~~~~~~l~~~~~--g~~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~-~~~~~~~G~l~Dr~G~r~v~~~g~~l 98 (594)
+..|..++..+...... .....+....|++.++++.+..+.++..+.+.++ .+.+++.|+++||+|||++++.+.++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 90 (413)
T PRK15403 11 HAATLFFPMALILYDFAAYLTTDLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALI 90 (413)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHH
Confidence 34455544444433322 2456677778899999999999999944444444 46689999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccCChhHHHHHHHHHHHhhhhhhhhhhhHhHHhhcCCC-ceeehhHHHHHhhhhHHHHHHHHHHHH
Q 007665 99 NFGGYFMIWLAVMKKIAKPKVWQMCLYICIGANSQNFANTGSLVTCVKNFPE-SRGMMLGLMKGFVGLSGAVFTQIYLAI 177 (594)
Q Consensus 99 ~~ig~~l~~~a~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp~-~rg~~~gi~~~~~glg~~i~~~l~~~l 177 (594)
+.++.+++.++ ++++.+++.|+++|++.+...+....++.|++|+ +|++++++...+..+|..+++.+.+.+
T Consensus 91 ~~~~~~~~~~a-------~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l 163 (413)
T PRK15403 91 FTLACAATLFT-------TSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAAL 163 (413)
T ss_pred HHHHHHHHHHc-------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99988877654 6889999999999999987666777788899985 689999999998889988887665544
Q ss_pred hCCChHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHH
Q 007665 178 YGNDAKSMILLIAWLPALVSLVFVYTIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAV 257 (594)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (594)
.+. .+||..|.......++..+..
T Consensus 164 ~~~--------------------------------~gw~~~f~~~~~~~~i~~~~~------------------------ 187 (413)
T PRK15403 164 MHF--------------------------------VHWKVLFAIIAVMGLIAFVGL------------------------ 187 (413)
T ss_pred HHh--------------------------------cCHHHHHHHHHHHHHHHHHHH------------------------
Confidence 322 356666552211111000000
Q ss_pred HHhhhhcchhhhhhhhhhhhcCCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCC
Q 007665 258 CIFVFLPLFIAFREEFAAWQQRKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPP 337 (594)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (594)
....++.++ ++ + .+..
T Consensus 188 --------~~~lp~~~~----------~~------~----------------------------------------~~~~ 203 (413)
T PRK15403 188 --------LLAMPETVK----------RG------A----------------------------------------VPFS 203 (413)
T ss_pred --------HHhCCCCcc----------cc------C----------------------------------------CCCC
Confidence 000000000 00 0 0000
Q ss_pred CCCCCccHHHhhchHHHHHHHHHHHhhccccceeeccHHHHHHhc-CCCCCcchhhHHHHhhhhhHhhhhhcccc-HHHh
Q 007665 338 KRGEDYGILQALLSIDMLILFLATFCGLGCSLTAIDNLGQIGESL-GYPQHTINTFVSLVSIWNYFGRVFAGFVS-EIIL 415 (594)
Q Consensus 338 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~s~~~a~~~~~~~~i~~~~g~~~~g~l~-dr~g 415 (594)
........++.+|||.+|...+.+++.......+....|.++++. |+++.+.++.......+..++..+.+.+. |+.+
T Consensus 204 ~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~ 283 (413)
T PRK15403 204 AKSVLRDFRNVFRNRLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTE 283 (413)
T ss_pred hHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCc
Confidence 000012446788999999877766665555455556678888765 89988888887777777777766666544 3332
Q ss_pred hhccCCchHHHHHHHHHHHHHHHHHhccCcc-hHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhh
Q 007665 416 LKYKVPRPLIMAISLILSAVGDVLIAFPKPG-SVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGS 494 (594)
Q Consensus 416 ~r~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~ 494 (594)
+|.......+..++.++..++.. ...+.. ..++..+++++|.+...+......-.. ....+|++.++.+.....+.
T Consensus 284 ~~~~~~~~~~~~ig~~l~~~~~~--~~~~~~~~~~~~~~l~~~G~~~~~p~~~~~al~~-~~~~~G~a~a~~~~~~~~~~ 360 (413)
T PRK15403 284 PRFIWRAVPIQLVGLALLIVGNL--LWPHVWLWSVLGTSLYAFGIGLIFPTLFRFTLFS-NNLPKGTVSASLNMVILMVM 360 (413)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHH--HccccHHHHHHHHHHHHHHHHHHhHHHHHHHhcc-CCCCCcHHHHHHHHHHHHHH
Confidence 22100000011112111111111 112222 235566777888887776666433211 12357999998888777776
Q ss_pred hhhhhhHHHhhhhH
Q 007665 495 YVLNVIVVGRLYDR 508 (594)
Q Consensus 495 ~~~gp~~~g~l~~~ 508 (594)
.+ ++...|++.+.
T Consensus 361 ~~-~~~~~g~~~~~ 373 (413)
T PRK15403 361 AV-SVEIGRWLWFN 373 (413)
T ss_pred HH-HHHHHHHHHHc
Confidence 65 77777777655
No 60
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.93 E-value=9.1e-24 Score=219.87 Aligned_cols=343 Identities=14% Similarity=0.054 Sum_probs=217.0
Q ss_pred hhhchhhhHHHHHHHhC--CCHhHHHHHHHH--Hh---hh-hhhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHh
Q 007665 40 ATYLFGTYSKEIKSTLG--YDQTTLNLLSTC--KD---LG-ANVGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVM 111 (594)
Q Consensus 40 ~~~~~~~~~~~l~~~~~--~s~~~~~~~~~~--~~---~~-~~~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~ 111 (594)
+.+.++...+.+.+++. .++++.++..+. +. +. .+.+++.|+++||+|||+++.++.++..++.++++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~-- 85 (394)
T TIGR00883 8 DFYLYGFAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLL-- 85 (394)
T ss_pred HHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhC--
Confidence 55667777788877654 455655552221 11 12 2347899999999999999999999999998877554
Q ss_pred hccCChhH--------HHHHHHHHHHhhhhhhhhhhhHhHHhhcCC-CceeehhHHHHHhhhhHHHHHHHHHHHHhCCCh
Q 007665 112 KKIAKPKV--------WQMCLYICIGANSQNFANTGSLVTCVKNFP-ESRGMMLGLMKGFVGLSGAVFTQIYLAIYGNDA 182 (594)
Q Consensus 112 ~~~~~~~~--------~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp-~~rg~~~gi~~~~~glg~~i~~~l~~~l~~~~~ 182 (594)
+++ ..+++.|+++|++.+...+....++.|++| ++|+++.++...+..+|..+++.+...+...
T Consensus 86 -----~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~-- 158 (394)
T TIGR00883 86 -----PSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYL-- 158 (394)
T ss_pred -----CChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHh--
Confidence 333 246789999999999998888999999997 5799999999888888888877554322110
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHHhhh
Q 007665 183 KSMILLIAWLPALVSLVFVYTIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCIFVF 262 (594)
Q Consensus 183 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (594)
... ......+||..|....... +..+ .
T Consensus 159 ---------------------~~~-~~~~~~~w~~~~~~~~~~~----~~~~---------------------------~ 185 (394)
T TIGR00883 159 ---------------------LGD-DALLEWGWRIPFLVSAVLV----LIGL---------------------------Y 185 (394)
T ss_pred ---------------------cCH-HHhhccchHHHHHHHHHHH----HHHH---------------------------H
Confidence 000 0001346776665211110 0000 0
Q ss_pred hcchhhhhhhhhhhhcCCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCCCCC
Q 007665 263 LPLFIAFREEFAAWQQRKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKRGED 342 (594)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (594)
+....+++ +.+. . +++ .++ ...
T Consensus 186 --~~~~~~~~-~~~~---------------~------------------------~~~-------------~~~---~~~ 207 (394)
T TIGR00883 186 --LRRNLEET-PVFE---------------K------------------------AQE-------------KHK---KKR 207 (394)
T ss_pred --HHHhcCCC-hhHH---------------H------------------------HHh-------------ccc---ccc
Confidence 00000000 0000 0 000 000 001
Q ss_pred ccHHHhhchHH--HHHHHHHHHhhccccceeeccHHHHHH-hcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhcc
Q 007665 343 YGILQALLSID--MLILFLATFCGLGCSLTAIDNLGQIGE-SLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYK 419 (594)
Q Consensus 343 ~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~ 419 (594)
.+.++.++++. ++......++..........+.|.+.+ +.|.++.+.+.......+.+.+++++.|+++||++||+
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~- 286 (394)
T TIGR00883 208 GPIRETLTKHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRP- 286 (394)
T ss_pred CCHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHH-
Confidence 23355555554 555555544444444445566788874 56899888999999999999999999999999998874
Q ss_pred CCchHHHHHHHHHHHHHHH-HHhc--cC-cchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchh-hccchhhh
Q 007665 420 VPRPLIMAISLILSAVGDV-LIAF--PK-PGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCG-QLASPLGS 494 (594)
Q Consensus 420 ~~~~~~~~~~~~~~~i~~~-~~~~--~~-~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~-~~~~~lg~ 494 (594)
.+...+.+....+.. .... .+ ........++.|++.+...+...+.+.|.+|+++++++.|+. +....+++
T Consensus 287 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~ 362 (394)
T TIGR00883 287 ----VLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFG 362 (394)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHh
Confidence 222222222222211 1111 12 233445567778888888888999999999999999999985 44556777
Q ss_pred hhhhhhHHHhhhhH
Q 007665 495 YVLNVIVVGRLYDR 508 (594)
Q Consensus 495 ~~~gp~~~g~l~~~ 508 (594)
.+ +|.+.|.+.|.
T Consensus 363 ~~-~p~~~g~l~~~ 375 (394)
T TIGR00883 363 GF-APYIAAALVAM 375 (394)
T ss_pred hH-HHHHHHHHHHH
Confidence 55 89999999988
No 61
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.93 E-value=3.2e-23 Score=216.10 Aligned_cols=327 Identities=12% Similarity=0.074 Sum_probs=205.9
Q ss_pred hhchhhhHHHHHHHhCCCHhHHHHHHHHHhhhh-hhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhccCChhH
Q 007665 41 TYLFGTYSKEIKSTLGYDQTTLNLLSTCKDLGA-NVGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIAKPKV 119 (594)
Q Consensus 41 ~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~~~~ 119 (594)
...+....|.+.+++|.|..+.+++.+.+.++. +.+++.|+++||+|||++++.+.+++.++..++..+ +++
T Consensus 19 ~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~-------~~~ 91 (392)
T PRK10473 19 IDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLA-------ETS 91 (392)
T ss_pred HHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHh-------CcH
Confidence 334556789999999999999999766666665 558899999999999999999999988888776544 577
Q ss_pred HHHHHHHHHHhhhhhhhhhhhHhHHhhcCC-CceeehhHHHHHhhhhHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHH
Q 007665 120 WQMCLYICIGANSQNFANTGSLVTCVKNFP-ESRGMMLGLMKGFVGLSGAVFTQIYLAIYGNDAKSMILLIAWLPALVSL 198 (594)
Q Consensus 120 ~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp-~~rg~~~gi~~~~~glg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~l 198 (594)
+.+++.|+++|++.+..++....++.+++| ++|+++.|+......+|..+++.+...+.+.
T Consensus 92 ~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~------------------ 153 (392)
T PRK10473 92 SLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLK------------------ 153 (392)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC------------------
Confidence 888899999999999888888899999997 6799999999888878877776554443322
Q ss_pred HHHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHHhhhhcchhhhhhhhhhhhc
Q 007665 199 VFVYTIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCIFVFLPLFIAFREEFAAWQQ 278 (594)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (594)
.+|+..+.....+.+...++. ....++++
T Consensus 154 --------------~g~~~~~~~~~~~~~i~~~~~--------------------------------~~~~~~~~----- 182 (392)
T PRK10473 154 --------------FPWQSLFYTMAAMGILVLLLS--------------------------------LFILKETR----- 182 (392)
T ss_pred --------------cChHHHHHHHHHHHHHHHHHH--------------------------------HHHcCCCC-----
Confidence 355555442111111000000 00011100
Q ss_pred CCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCCCCCccHHHhhchHHHHHHH
Q 007665 279 RKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKRGEDYGILQALLSIDMLILF 358 (594)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 358 (594)
++ + + + .+ .......++.++++.++...
T Consensus 183 ------~~-------------------------------~-~---~---------~~---~~~~~~~~~~~~~~~~~~~~ 209 (392)
T PRK10473 183 ------PA-------------------------------R-A---P---------AA---SSKPRENSESLLNRFFLSRL 209 (392)
T ss_pred ------Cc-------------------------------c-c---C---------Cc---cchHHHHHHHHhCHHHHHHH
Confidence 00 0 0 0 00 00011235667788776544
Q ss_pred HHHHhhccccceeeccHHHHHH-hcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHH
Q 007665 359 LATFCGLGCSLTAIDNLGQIGE-SLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGD 437 (594)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~ 437 (594)
+...+.......+....|.+.+ +.|+++.+.+...+..+++.++++++.+++.||+++|+ .+..+.++..++.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~------~~~~~~~~~~~~~ 283 (392)
T PRK10473 210 VITTLSVTVILTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRT------LMLTSQVLFLAAG 283 (392)
T ss_pred HHHHHHHHHHHHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH------HHHHHHHHHHHHH
Confidence 4433332222223334455554 56999888898999999999999999999999998873 4455555555555
Q ss_pred HHHhccC-cchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhH
Q 007665 438 VLIAFPK-PGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDR 508 (594)
Q Consensus 438 ~~~~~~~-~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~ 508 (594)
+.+.... ....+....+.+.+.+..++.. ...+..|.++++ |.......++..+ ++.+.+.+.+.
T Consensus 284 ~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~~~~~~~~~~~~---g~~~~~~~~~~~~-g~~~~~~l~~~ 349 (392)
T PRK10473 284 ITLALSPSHAVSLFGITLICAGFSVGFGVA--MSQALGPFSLRA---GVASSTLGIAQVC-GSSLWIWLAAV 349 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHH--HHHHhccCcccc---cHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 5444332 2223333444444444434332 333444543332 4444444555544 67677777776
No 62
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.93 E-value=2.8e-23 Score=213.48 Aligned_cols=404 Identities=15% Similarity=0.113 Sum_probs=262.7
Q ss_pred HHHHHHhC--CCHhHHHH----HHHHHhhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHH
Q 007665 49 KEIKSTLG--YDQTTLNL----LSTCKDLGANV-GVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIAKPKVWQ 121 (594)
Q Consensus 49 ~~l~~~~~--~s~~~~~~----~~~~~~~~~~~-~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~~~~~~ 121 (594)
..+.+.+| .++++..+ +.+.+.+|.++ +...|+++||+|||..+.++.++..++.+++.++.. . +++.+
T Consensus 43 ~t~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~--~--~~~e~ 118 (485)
T KOG0569|consen 43 ETLIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKS--A--PSFEM 118 (485)
T ss_pred HHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHH--h--hhHHH
Confidence 44455666 45554443 45556667655 779999999999999999999999888888766533 2 67899
Q ss_pred HHHHHHHHhhhhhhhhhhhHhHHhhcCCC-ceeehhHHHHHhhhhHHHHHHHHH-HHHhCC-ChHHHHHHHHHHHHHHHH
Q 007665 122 MCLYICIGANSQNFANTGSLVTCVKNFPE-SRGMMLGLMKGFVGLSGAVFTQIY-LAIYGN-DAKSMILLIAWLPALVSL 198 (594)
Q Consensus 122 l~~~r~l~G~g~g~~~~~~~~~i~~~fp~-~rg~~~gi~~~~~glg~~i~~~l~-~~l~~~-~~~~~~~~~~~~~~~~~l 198 (594)
++++|++.|+..|........++.|.-|+ .||....+...+..+|..++..++ ..++.+ ..|++++.....|.+..+
T Consensus 119 li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l 198 (485)
T KOG0569|consen 119 LILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQL 198 (485)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999996 599999998888888877765444 244443 557888888777777776
Q ss_pred HHHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHHhhhhcchhhhhhhhhhhhc
Q 007665 199 VFVYTIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCIFVFLPLFIAFREEFAAWQQ 278 (594)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (594)
+...++.+.|. |+ +. ...++
T Consensus 199 ~~l~~~PESPk---------~L---l~------------------------------------------~k~~~------ 218 (485)
T KOG0569|consen 199 ALLPFLPESPK---------YL---LI------------------------------------------KKGDE------ 218 (485)
T ss_pred HHHhcCCCCcc---------hH---HH------------------------------------------HcCCH------
Confidence 65555433322 11 00 00000
Q ss_pred CCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCCCCCccHHHhhchHHHHH--
Q 007665 279 RKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKRGEDYGILQALLSIDMLI-- 356 (594)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-- 356 (594)
++++.++..++.+.+.+.+.+...+ .. ..++.+..+..+++++++++....
T Consensus 219 -------------------~~A~~sl~~y~G~~~~~~~~e~~~~------e~--~~~~~~~~~~~sl~~~~~~~~lR~~~ 271 (485)
T KOG0569|consen 219 -------------------EEARKALKFYRGKEDVEAEIEEMLR------EI--EEEELEKKKQISLRQLLKNPTLRRPL 271 (485)
T ss_pred -------------------HHHHHHHHHHhCCCcchhHHHHHHH------HH--HHhccccccCCcHHHHhcCcchhHHH
Confidence 0001111111111000000000000 00 000001112356778887765432
Q ss_pred --HHHHHHhh-ccccceeeccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHH
Q 007665 357 --LFLATFCG-LGCSLTAIDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILS 433 (594)
Q Consensus 357 --~~~~~~~~-~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 433 (594)
.....+.. ........++...++++.|+++.++.......++.+.+..+++.++.||+||| +++..+..++
T Consensus 272 ~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRR------pLll~~~~~~ 345 (485)
T KOG0569|consen 272 LIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRR------PLLLISLSLM 345 (485)
T ss_pred HHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc------HHHHHHHHHH
Confidence 22223333 33444555566778889999999999999999999999999999999999988 4666666666
Q ss_pred HHHHHHHhcc------C-cchH---HHHHHHHHHHhhhhH-HHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHH
Q 007665 434 AVGDVLIAFP------K-PGSV---YVASLLVGFSYGAQL-TLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVV 502 (594)
Q Consensus 434 ~i~~~~~~~~------~-~~~~---~~~~~l~G~~~g~~~-~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~ 502 (594)
.+..+++... . ++.. .+..+++.++++... |+.+-+.+|++|.+.|++++......+++++++. ...+
T Consensus 346 ~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv-~~~f 424 (485)
T KOG0569|consen 346 AVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIV-GFAF 424 (485)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHH-HHHH
Confidence 5554444321 1 2222 233344444444433 4455688999999999999999999999999874 4466
Q ss_pred HhhhhHHHHHhhhhhhcccccCCCcccccccchHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhHHHHhHHH
Q 007665 503 GRLYDREAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFILVMRTRRYYSGDIYKKFKEQ 575 (594)
Q Consensus 503 g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 575 (594)
-.+.+. .+. ..|++..+.+.+..+..++..+|||++...|+.+..+++
T Consensus 425 p~l~~~-----------------------~g~--~~filF~i~~~~~~i~~~~~lPETkgr~~~eI~~~~~~~ 472 (485)
T KOG0569|consen 425 PPLQNV-----------------------IGP--YVFILFVIPLAIFLIYLYRYLPETKGRTPYEIIEELEKR 472 (485)
T ss_pred HHHHHH-----------------------hcc--hhhHHHHHHHHHHHHHHHHhCcccCCCCHHHHHHHHHhC
Confidence 666555 123 677888888999999999999999998776766554433
No 63
>PRK10054 putative transporter; Provisional
Probab=99.93 E-value=1.6e-23 Score=218.06 Aligned_cols=347 Identities=12% Similarity=0.027 Sum_probs=225.8
Q ss_pred hchhhhHHHHHHHhCCCHhHHHHHHHHH-hhhhhhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhccCChhHH
Q 007665 42 YLFGTYSKEIKSTLGYDQTTLNLLSTCK-DLGANVGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIAKPKVW 120 (594)
Q Consensus 42 ~~~~~~~~~l~~~~~~s~~~~~~~~~~~-~~~~~~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~~~~~ 120 (594)
..++.+.+.+++++|+|..+.+++.+.+ ..+.+.+++.|+++||+|||++++++.++..++.++..+. ++++
T Consensus 25 ~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~-------~~~~ 97 (395)
T PRK10054 25 ATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLV-------NNVT 97 (395)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHH-------hHHH
Confidence 3455566678899999999999955554 4444668999999999999999999999888887766544 6777
Q ss_pred HHHHHHHHHhhhhhhhhhhhHhHHhhcCC-CceeehhHHHHHhhhhHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHH
Q 007665 121 QMCLYICIGANSQNFANTGSLVTCVKNFP-ESRGMMLGLMKGFVGLSGAVFTQIYLAIYGNDAKSMILLIAWLPALVSLV 199 (594)
Q Consensus 121 ~l~~~r~l~G~g~g~~~~~~~~~i~~~fp-~~rg~~~gi~~~~~glg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~l~ 199 (594)
.+++.|.+.|.+.+...+.......|.+| ++|+++.|+......+|..+++++.+.+..
T Consensus 98 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-------------------- 157 (395)
T PRK10054 98 LVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-------------------- 157 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------------
Confidence 77788888887777666777777888886 579999999999888999988766554321
Q ss_pred HHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHHhhhhcchhhhhhhhhhhhcC
Q 007665 200 FVYTIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCIFVFLPLFIAFREEFAAWQQR 279 (594)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (594)
.+|+..|.......++ ..+ ...+.+++.+
T Consensus 158 -------------~g~~~~f~~~~~~~~i---~~i-----------------------------~~~~~~~~~~------ 186 (395)
T PRK10054 158 -------------QSINLPFWLAAICSAF---PLV-----------------------------FIQIWVQRSE------ 186 (395)
T ss_pred -------------hccCcHHHHHHHHHHH---HHH-----------------------------HHHHHHhccc------
Confidence 2455555421111000 000 0001111100
Q ss_pred CCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCCCCCccHHHhhchHHHHHHHH
Q 007665 280 KQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKRGEDYGILQALLSIDMLILFL 359 (594)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 359 (594)
+++ + + .++ +..+.++.+|+|.+|...+
T Consensus 187 -----~~~-----~------------------------~---------------~~~----~~~~~~~~~~~~~~~~~~~ 213 (395)
T PRK10054 187 -----KAI-----A------------------------T---------------ETG----SVWSPSVLLQDKALLWFTC 213 (395)
T ss_pred -----ccc-----c------------------------c---------------chh----hhhhhhhhccCceehHHHH
Confidence 000 0 0 000 0011256678888877666
Q ss_pred HHHhhccccceeeccHHHHHH---hcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHH
Q 007665 360 ATFCGLGCSLTAIDNLGQIGE---SLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVG 436 (594)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~---~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~ 436 (594)
..++.......+..+.+.+.. +.+.+....+..+....+.....+...|.+.||.++| ..+..++.+..++
T Consensus 214 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~------~~l~~~~~~~~~~ 287 (395)
T PRK10054 214 SGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIR------PLMTAGTLCFVIG 287 (395)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCch------hHHHHHHHHHHHH
Confidence 555443333333334455543 3355555666777777777777777788888887665 3445555555666
Q ss_pred HHHHhcc-Cc-chHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhh
Q 007665 437 DVLIAFP-KP-GSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQL 514 (594)
Q Consensus 437 ~~~~~~~-~~-~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~ 514 (594)
...+... ++ +.+.+..++.|++.+...+.....+.+..|++.+++.++..+ ...+|..+ ||.+.|.++|.
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~-Gp~~~G~l~~~------ 359 (395)
T PRK10054 288 LVGFIFSGNSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAI-NPLVSGVILTT------ 359 (395)
T ss_pred HHHHHHcchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceehHhHHH-HHHHHHHH-HHHHHHHHHHH------
Confidence 5544432 22 334556778888887777777788889999999999988654 55577765 99999999998
Q ss_pred hhhhcccccCCCcccccccchHHHHHHHHHHHHHHHH
Q 007665 515 AEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGAL 551 (594)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~ 551 (594)
.++...|.+.+++..++.+
T Consensus 360 ------------------~g~~~~~~~~~~~~~~~~~ 378 (395)
T PRK10054 360 ------------------LPPWSLFVILALAIVAAWL 378 (395)
T ss_pred ------------------cChhhHHHHHHHHHHHHHH
Confidence 5677777776554444433
No 64
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.93 E-value=5.3e-23 Score=213.42 Aligned_cols=326 Identities=11% Similarity=0.009 Sum_probs=227.7
Q ss_pred hhhhHHHHHHHhCCCHhHHHHHHHH-HhhhhhhhhhhhhhhcccCchHHH----HHHHHHHHHHHHHHHHHHhhccCChh
Q 007665 44 FGTYSKEIKSTLGYDQTTLNLLSTC-KDLGANVGVLSGLLAEVTPPWLVL----LVGSAMNFGGYFMIWLAVMKKIAKPK 118 (594)
Q Consensus 44 ~~~~~~~l~~~~~~s~~~~~~~~~~-~~~~~~~~~~~G~l~Dr~G~r~v~----~~g~~l~~ig~~l~~~a~~~~~~~~~ 118 (594)
+.++.|.+.+++|.|.++++++.+. .....+.+++.|+++||+|||... .++..++.+. .+ ... ++
T Consensus 23 ~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~~--~~-----~~~--~~ 93 (382)
T TIGR00902 23 FLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAAA--FS-----AGA--HN 93 (382)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHH--HH-----Hhh--hh
Confidence 4455678889999999999995544 445556799999999999985433 2222222221 11 111 57
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhHhHHhhcCCCceeehhHHHHHhhhhHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHH
Q 007665 119 VWQMCLYICIGANSQNFANTGSLVTCVKNFPESRGMMLGLMKGFVGLSGAVFTQIYLAIYGNDAKSMILLIAWLPALVSL 198 (594)
Q Consensus 119 ~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp~~rg~~~gi~~~~~glg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~l 198 (594)
++.+++.|+++|.+.+...+...++.. +++++|+++.|....+.++|.++++++.+.+.+.
T Consensus 94 ~~~l~~~~~l~~~~~~~~~p~~~al~~-~~~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~------------------ 154 (382)
T TIGR00902 94 AWLLFIAIGLFALFFSAGMPIGDALAN-TWQKQFGLDYGKVRLIGSAAFIIGSALFGGLIGM------------------ 154 (382)
T ss_pred HHHHHHHHHHHHHHHccchhHHHHHHH-HHHHHcCCCccHHHHHHHHHHHHHHHHHHHHHHH------------------
Confidence 889999999999888877777666654 4567899999999988899999988777665543
Q ss_pred HHHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHHhhhhcchhhhhhhhhhhhc
Q 007665 199 VFVYTIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCIFVFLPLFIAFREEFAAWQQ 278 (594)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (594)
.+|+..|...... ..+..+ . +..+++.
T Consensus 155 --------------~g~~~~f~~~~~~---~~~~~~-~------------------------------~~~~~~~----- 181 (382)
T TIGR00902 155 --------------FDEQNILAILTAG---LAFMLI-G------------------------------FLIKPTI----- 181 (382)
T ss_pred --------------cChhHHHHHHHHH---HHHHHH-H------------------------------HHcCCCC-----
Confidence 3555554411100 000000 0 0001000
Q ss_pred CCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCCCCCccHHHhhchHHHHHHH
Q 007665 279 RKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKRGEDYGILQALLSIDMLILF 358 (594)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 358 (594)
+++ + + + ..++ .......++.+|+|.+|.+.
T Consensus 182 ------~~~-----~------------------------~------~-------~~~~--~~~~~~~~~~l~~~~~~~~l 211 (382)
T TIGR00902 182 ------PPK-----D------------------------A------I-------PEDE--SQGDSAFIALLKNPMNLRFL 211 (382)
T ss_pred ------CCC-----c------------------------c------c-------cccc--cccchhHHHHHcChHHHHHH
Confidence 000 0 0 0 0000 00112357889999999988
Q ss_pred HHHHhhccccceeeccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHH
Q 007665 359 LATFCGLGCSLTAIDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDV 438 (594)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~ 438 (594)
+..++.......+..+.|.+.++.|.++.+.+...++..++.+++.++.+++.||++.| .++.++.++..+...
T Consensus 212 ~~~~l~~~~~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~------~~l~~~~~~~~~~~~ 285 (382)
T TIGR00902 212 AAVCLIQGAHAAYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSAR------DLLLISAIACVGRWA 285 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHH------HHHHHHHHHHHHHHH
Confidence 87777666666677788888899999999999999999999999999999999998876 456677777777777
Q ss_pred HHhccC-cchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhh-ccchhhhhhhhhhHHHhhhhH
Q 007665 439 LIAFPK-PGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQ-LASPLGSYVLNVIVVGRLYDR 508 (594)
Q Consensus 439 ~~~~~~-~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~-~~~~lg~~~~gp~~~g~l~~~ 508 (594)
++...+ .+.++...++.|++.+...+....++.+. |++++++.+++.+ ...++|..+ +|.+.|.++|.
T Consensus 286 ~~~~~~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~-g~~~~G~l~~~ 355 (382)
T TIGR00902 286 IIGAIEAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAI-FTAFAGFIYPT 355 (382)
T ss_pred HHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHh
Confidence 666444 35566678999999999999988899987 8889999999976 466788865 99999999998
No 65
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.92 E-value=1.3e-23 Score=216.88 Aligned_cols=341 Identities=17% Similarity=0.130 Sum_probs=215.4
Q ss_pred hhhhchhhhHHH-HHHHhCCCHhHHHHHHHHHhhhh-hhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhccCC
Q 007665 39 GATYLFGTYSKE-IKSTLGYDQTTLNLLSTCKDLGA-NVGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIAK 116 (594)
Q Consensus 39 g~~~~~~~~~~~-l~~~~~~s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~ 116 (594)
...+.++.+.|+ +++++|+|..+.+++.+...++. +.+++.|+++||+|||++++++.++..++.++++++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~------- 87 (366)
T TIGR00886 15 SVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLA------- 87 (366)
T ss_pred HHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH-------
Confidence 355677888895 99999999999999766666655 568899999999999999999999999998877655
Q ss_pred h-hHHHHHHHHHHHhhhhhhhhhhhHhHHhhcCC-CceeehhHHHHHhhhhHHHHHHHHHHHHhCCChHHHHHHHHHHHH
Q 007665 117 P-KVWQMCLYICIGANSQNFANTGSLVTCVKNFP-ESRGMMLGLMKGFVGLSGAVFTQIYLAIYGNDAKSMILLIAWLPA 194 (594)
Q Consensus 117 ~-~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp-~~rg~~~gi~~~~~glg~~i~~~l~~~l~~~~~~~~~~~~~~~~~ 194 (594)
+ +++.+++.|+++|++.+. +.....++.+++| ++|+++.++......+|..+++.+...+..
T Consensus 88 ~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~--------------- 151 (366)
T TIGR00886 88 VQSYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIG--------------- 151 (366)
T ss_pred hhhHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHH---------------
Confidence 6 788999999999998664 5567788999997 579999999887666777666544322110
Q ss_pred HHHHHHHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHHhhhhcchhhhhhhhh
Q 007665 195 LVSLVFVYTIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCIFVFLPLFIAFREEFA 274 (594)
Q Consensus 195 ~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (594)
.+..........+|++.|... .++...+..+ ......+++++
T Consensus 152 -------~~~~~~~~~~~~~w~~~~~~~--~~~~~~~~~~-----------------------------~~~~~~~~~~~ 193 (366)
T TIGR00886 152 -------SLIFGAGLPAHLAWGWAFVIV--PAGILLLPAL-----------------------------LIFFVGADTPP 193 (366)
T ss_pred -------HHHhcccccccccccchhHHH--HHHHHHHHHH-----------------------------HHHHhcccCCc
Confidence 011111111134788777311 0100000000 00001111100
Q ss_pred hhhcCCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCCCCCccHHHhhchHHH
Q 007665 275 AWQQRKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKRGEDYGILQALLSIDM 354 (594)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 354 (594)
. +++ + .+ .+.+. . ....+.......++.+++|.+
T Consensus 194 ~--------~~~------~-----------------~~-----~~~~~-~---------~~~~~~~~~~~~~~~~~~~~~ 227 (366)
T TIGR00886 194 G--------KPA------T-----------------GK-----LSFKG-A---------RWSVGTGALGDQLKVFRDRHT 227 (366)
T ss_pred c--------ccc------c-----------------hh-----ccccc-c---------cccccchhHHHHHHHHhccch
Confidence 0 000 0 00 00000 0 000000001144678889999
Q ss_pred HHHHHHHHhhccccceeeccHHHHHHh-cCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHH
Q 007665 355 LILFLATFCGLGCSLTAIDNLGQIGES-LGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILS 433 (594)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 433 (594)
|...+.+++..........+.|.++++ .|+++.+++...++..+.+.++++++|+++||+++|+ ....+.++.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~------~~~~~~~~~ 301 (366)
T TIGR00886 228 WILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGAR------KLLMSFLGV 301 (366)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccch------hHHHHHHHH
Confidence 888777776655555666777888865 5999999998999999999999999999999998863 222223333
Q ss_pred HHHHHHHh--cc---CcchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhh
Q 007665 434 AVGDVLIA--FP---KPGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLG 493 (594)
Q Consensus 434 ~i~~~~~~--~~---~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg 493 (594)
+.+..++. .. +....+....+.+++.|...+......++.++ +++|+++|+.+...++|
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 302 AMGAFLVVLGLVSPLSLAVFIVLFVALFFFSGAGNGSTFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred HHHHHHHHhcCCCcchHHHHHHHHHHHHHHhccccchhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 33333222 22 12222333444555555556666677777776 79999999988877765
No 66
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.92 E-value=4.1e-25 Score=226.48 Aligned_cols=331 Identities=19% Similarity=0.233 Sum_probs=222.6
Q ss_pred hhchhhhHH-HHHHHhCCCHhHHHHHHHHHhhhh-hhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhccCChh
Q 007665 41 TYLFGTYSK-EIKSTLGYDQTTLNLLSTCKDLGA-NVGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIAKPK 118 (594)
Q Consensus 41 ~~~~~~~~~-~l~~~~~~s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~~~ 118 (594)
...+....| .+.+++|.|..+++++.+.+.++. +.+++.|+++||+|||+++.++.++.+++..+..++ ++
T Consensus 12 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~-------~~ 84 (352)
T PF07690_consen 12 FSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFA-------SN 84 (352)
T ss_dssp HHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHH-------CC
T ss_pred HHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhh-------hh
Confidence 334566667 889999999999999666665555 669999999999999999999999999985555433 45
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhHhHHhhcCCC-ceeehhHHHHHhhhhHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHH
Q 007665 119 VWQMCLYICIGANSQNFANTGSLVTCVKNFPE-SRGMMLGLMKGFVGLSGAVFTQIYLAIYGNDAKSMILLIAWLPALVS 197 (594)
Q Consensus 119 ~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp~-~rg~~~gi~~~~~glg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 197 (594)
++.+++.|++.|++.+...+....++.+++|+ +|++++|+...+.++|..+++.+.+.+.+.
T Consensus 85 ~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~----------------- 147 (352)
T PF07690_consen 85 FWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISY----------------- 147 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH-----------------
T ss_pred HHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhc-----------------
Confidence 66888999999999999999999999999985 899999999999999999988777655432
Q ss_pred HHHHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHHhhhhcchhhhhhhhhhhh
Q 007665 198 LVFVYTIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCIFVFLPLFIAFREEFAAWQ 277 (594)
Q Consensus 198 l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (594)
.+|+..|.....+.+...++ . .....++++.
T Consensus 148 ---------------~~~~~~~~~~~~~~~~~~il---~-----------------------------~~~~~~~~~~-- 178 (352)
T PF07690_consen 148 ---------------FGWRWAFLISAILSLIAAIL---F-----------------------------ILFLPEPPPP-- 178 (352)
T ss_dssp ---------------CHHCCHHHHHHHHHHHHHHH---H-----------------------------HCCC---STT--
T ss_pred ---------------cccccccccccchhhhhhhh---H-----------------------------hhhhhhcccc--
Confidence 24555544211111000000 0 0000100000
Q ss_pred cCCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCCCCCc-cHHHhhchHHHHH
Q 007665 278 QRKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKRGEDY-GILQALLSIDMLI 356 (594)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~ 356 (594)
.. + + + +++++ .+...+.. .++..++++.+|.
T Consensus 179 -------~~------~------------------------~-~---~~~~~-------~~~~~~~~~~~~~~~~~~~~~~ 210 (352)
T PF07690_consen 179 -------RE------R------------------------E-S---PKESE-------SKKPKPLKPGFKSLFKNPVLWI 210 (352)
T ss_dssp -------TT---------------------------------S---STTTT---------HHHCCCH-CTHHHHHHCCHH
T ss_pred -------cc------c------------------------c-c---ccccc-------cccccccccccccccccchhhh
Confidence 00 0 0 0 00000 00000001 1356677777764
Q ss_pred HHHHHHhhccccceeeccHHHH-HHhcCCC-CCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHH
Q 007665 357 LFLATFCGLGCSLTAIDNLGQI-GESLGYP-QHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSA 434 (594)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~-~~~~g~s-~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 434 (594)
.....++..........+.|.+ .+..|++ ..+.+...++..+...+++++.|+++||+++|+ ..........
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~------~~~~~~~~~~ 284 (352)
T PF07690_consen 211 LLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRR------RLLIAILLLI 284 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHH------HHHHHHHHHH
T ss_pred hhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHH------HHHHHHHHHH
Confidence 4444444333334455667776 4567888 678888899999999999999999999988653 2223333333
Q ss_pred HHHHHHhc---c-CcchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhh
Q 007665 435 VGDVLIAF---P-KPGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNV 499 (594)
Q Consensus 435 i~~~~~~~---~-~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp 499 (594)
+....+.. . +....+...++.|++.+...+....+..+.+|++++|++.|+.+...++++.+ ||
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~i-gP 352 (352)
T PF07690_consen 285 LGALGLLLLPFSSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGII-GP 352 (352)
T ss_dssp HHHHHHCCSHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHH-HH
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH-CC
Confidence 33333322 1 22445557788999999999999999999999999999999999999999865 66
No 67
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.92 E-value=1.3e-24 Score=226.11 Aligned_cols=373 Identities=14% Similarity=0.161 Sum_probs=260.9
Q ss_pred HHHhCCCHhHHHHHHHHHhhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHh
Q 007665 52 KSTLGYDQTTLNLLSTCKDLGANV-GVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIAKPKVWQMCLYICIGA 130 (594)
Q Consensus 52 ~~~~~~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~~~~~~l~~~r~l~G 130 (594)
+.++++|.+|-+++.+....|.+. +.+.|+++||||.|+++..+.++.++++++.-++.. .+++.+++.|++||
T Consensus 65 ~~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~-----~~~~~~~~~R~lqG 139 (466)
T KOG2532|consen 65 AGEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAAS-----IGFYLLLVLRFLQG 139 (466)
T ss_pred CceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHH-----hcchhhHHHHHHhH
Confidence 457899999999977777777765 779999999999999999999999999999877632 35567789999999
Q ss_pred hhhhhhhhhhHhHHhhcCC-CceeehhHHHHHhhhhHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHhccCCC
Q 007665 131 NSQNFANTGSLVTCVKNFP-ESRGMMLGLMKGFVGLSGAVFTQIYLAIYGNDAKSMILLIAWLPALVSLVFVYTIRPLKV 209 (594)
Q Consensus 131 ~g~g~~~~~~~~~i~~~fp-~~rg~~~gi~~~~~glg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 209 (594)
++.|..+++...+..+|.| ++|++..++..++..+|.++.-++.+.+.+.
T Consensus 140 l~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s----------------------------- 190 (466)
T KOG2532|consen 140 LGQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCES----------------------------- 190 (466)
T ss_pred HHHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcc-----------------------------
Confidence 9999999999999999998 6899999999999999998888777665432
Q ss_pred CCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHHhhhhcchhhhhhhhhhhhcCCCCCCCcccc
Q 007665 210 SSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCIFVFLPLFIAFREEFAAWQQRKQPTPASAVV 289 (594)
Q Consensus 210 ~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (594)
..+|+..|+.+..++ .++.+++... ..+ +|.++.
T Consensus 191 --~~GW~sifY~~g~~g---~i~~~~w~~~-----------------------------~~d------------~P~~h~ 224 (466)
T KOG2532|consen 191 --SLGWPSIFYVFGIVG---LIWFILWFLF-----------------------------YSD------------SPSKHP 224 (466)
T ss_pred --CCCCchHHHHHHHHH---HHHHHHHHHH-----------------------------hcC------------CcccCC
Confidence 257888887443332 2222222111 110 010000
Q ss_pred cccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCCCCCccHHHhhchHHHHHHHHHHHhhccccc
Q 007665 290 IVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKRGEDYGILQALLSIDMLILFLATFCGLGCSL 369 (594)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 369 (594)
.. ++.+..++++... .++.+...+.++++.++++.+|.+++..++.....+
T Consensus 225 ~i--------s~~El~~I~~~k~---------------------~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~ 275 (466)
T KOG2532|consen 225 NI--------SEKELKYIEKGKS---------------------EAHVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFY 275 (466)
T ss_pred CC--------CHHHHHHHHhccc---------------------ccccCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHH
Confidence 00 0000111110000 000011134678999999999999999999888888
Q ss_pred eeeccHHHHHHh-cCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhc---cCCchHHHHHHHHHHHHHHHHHhccCc
Q 007665 370 TAIDNLGQIGES-LGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKY---KVPRPLIMAISLILSAVGDVLIAFPKP 445 (594)
Q Consensus 370 ~~~~~~~~~~~~-~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~---~~~~~~~~~~~~~~~~i~~~~~~~~~~ 445 (594)
.+..+.|.|+.+ ++++..+.|++.++..+...+..+++|.++||+.+|. +..|+..-.++....++.++.+.+.+.
T Consensus 276 ~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~ 355 (466)
T KOG2532|consen 276 LLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSD 355 (466)
T ss_pred HHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCC
Confidence 888899999985 6999999999999999999999999999999997751 123445555666666666665554432
Q ss_pred --chHHHHHHHHHHHh-hhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhhcccc
Q 007665 446 --GSVYVASLLVGFSY-GAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGMTRA 522 (594)
Q Consensus 446 --~~~~~~~~l~G~~~-g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~ 522 (594)
....+.+.....+. |...+....-..+. .+++.+..+|+.+....+++++ +|.+.|.+.... .
T Consensus 356 ~~~~~a~~~l~~~~~~~g~~~~Gf~~~~~~~-apq~a~~l~g~~~~~~~~~~~~-~P~~vg~~~~~~--t---------- 421 (466)
T KOG2532|consen 356 EHRLLAVILLTIAIGLSGFNISGFYKNHQDI-APQHAGFVMGIINFVGALAGFI-APLLVGIIVTDN--T---------- 421 (466)
T ss_pred CcchHHHHHHHHHHHHcccchhhhHhhhhhc-cchHHHHHHHHHHHHHHHHHHH-HHHheeeEeCCC--C----------
Confidence 21222222222222 22223333333333 4699999999999999999976 999999998421 0
Q ss_pred cCCCcccccccchHHHHHHHHHHHHHHHHHHHHH
Q 007665 523 MVKDLTCIGRQCYRLSFTILAGVNIFGALITFIL 556 (594)
Q Consensus 523 ~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 556 (594)
...|+..|.+.+++.+++.+...++
T Consensus 422 ---------~~eW~~VF~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 422 ---------REEWRIVFLIAAGILIVGNIIFLFF 446 (466)
T ss_pred ---------HHHHHHHHHHHHHHHHHhchheeEe
Confidence 1469999999999998888655444
No 68
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.92 E-value=5.8e-23 Score=213.65 Aligned_cols=353 Identities=12% Similarity=0.017 Sum_probs=222.5
Q ss_pred hhhHHHHHHHhCCCHhHHHHHHHHHhhhh-hhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHH
Q 007665 45 GTYSKEIKSTLGYDQTTLNLLSTCKDLGA-NVGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIAKPKVWQMC 123 (594)
Q Consensus 45 ~~~~~~l~~~~~~s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~~~~~~l~ 123 (594)
....+.+.++++.+..+.+++.+.+.+.. +++++.|+++||+|||++++.+.+++.++.+++.++ ++. +
T Consensus 23 ~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~-------~~~---~ 92 (393)
T PRK11195 23 LFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFG-------IHP---L 92 (393)
T ss_pred HHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHH-------HHH---H
Confidence 33445667899999999999665555554 679999999999999999999999998887766443 232 6
Q ss_pred HHHHHHhhhhhhhhhhhHhHHhhcCC-CceeehhHHHHHhhhhHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHH
Q 007665 124 LYICIGANSQNFANTGSLVTCVKNFP-ESRGMMLGLMKGFVGLSGAVFTQIYLAIYGNDAKSMILLIAWLPALVSLVFVY 202 (594)
Q Consensus 124 ~~r~l~G~g~g~~~~~~~~~i~~~fp-~~rg~~~gi~~~~~glg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~l~~~~ 202 (594)
+.|+++|++.+..+|...+++.|++| ++|+++.|+......+|.+++|.+.+.+.+.. ++..+++........++.
T Consensus 93 ~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~-~~~~~~i~~~~~~~~~~~-- 169 (393)
T PRK11195 93 LAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADPH-AEAALAVCALIYLLAALF-- 169 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH--
Confidence 78999999999999999999999998 57999999999988888899888877665421 111111110000000000
Q ss_pred HhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHHhhhhcchhhhhhhhhhhhcCCCC
Q 007665 203 TIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCIFVFLPLFIAFREEFAAWQQRKQP 282 (594)
Q Consensus 203 ~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (594)
...+++. +.++
T Consensus 170 ---------------------------------------------------------------~~~l~~~-~~~~----- 180 (393)
T PRK11195 170 ---------------------------------------------------------------NLFIPRL-GARR----- 180 (393)
T ss_pred ---------------------------------------------------------------HhcCCCC-cccc-----
Confidence 0000000 0000
Q ss_pred CCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCCCCCccHHHhhchHHHHHHHHHHH
Q 007665 283 TPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKRGEDYGILQALLSIDMLILFLATF 362 (594)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 362 (594)
++. ++ + .. ...+ ......+.++++|.++......+
T Consensus 181 --~~~----~~-------------------------------~-~~---~~~~----~~~~~~~~l~~~~~~~~~~~~~~ 215 (393)
T PRK11195 181 --PGQ----SW-------------------------------N-PI---ALLR----DFFHACRVLWRDKLGRFSLAGTT 215 (393)
T ss_pred --ccc----CC-------------------------------C-HH---HHHH----HHHHHHHHHHhCchhHHHHHHHH
Confidence 000 00 0 00 0000 00011245566666554433332
Q ss_pred hhccccceeeccHHHHHH-hcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHh
Q 007665 363 CGLGCSLTAIDNLGQIGE-SLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIA 441 (594)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~-~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~ 441 (594)
+.........+..+.+.+ .+|+++.+.+...+..+++..+|.++.+++.||.++|+ .+..+..+ .+..+.+.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~------~~~~g~~~-~~~~~~~~ 288 (393)
T PRK11195 216 LFWGAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLR------VLPAGILM-GLVVLLMA 288 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc------hHHHHHHH-HHHHHHHH
Confidence 222222233334455555 46999999999999999999999999988888765442 23333322 23222233
Q ss_pred ccC-cchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCc-cccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhhc
Q 007665 442 FPK-PGSVYVASLLVGFSYGAQLTLLFIIISELFGLKY-YSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGM 519 (594)
Q Consensus 442 ~~~-~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~-~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~ 519 (594)
..+ .+...+..++.|++.+...+...+.+.+..+++. +|.+.++.++..+++..+ +..+.+.+ +.
T Consensus 289 ~~~~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~-~~~~~~~~-~~----------- 355 (393)
T PRK11195 289 LQHSLLPAYPLLILIGALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLL-MLGLYSLL-VK----------- 355 (393)
T ss_pred HHhHHHHHHHHHHHHHHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHH-HHHHHHHH-HH-----------
Confidence 222 2334455667888888877777788887755544 699999999999999875 77777754 44
Q ss_pred ccccCCCcccccccchHHHHHHHHHHHHHHHHHHHHHH
Q 007665 520 TRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFILV 557 (594)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 557 (594)
.+-+..+++.+...++++.+.+..+
T Consensus 356 -------------~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (393)
T PRK11195 356 -------------LGVPVVAVIVGFGLLVALAMALLWR 380 (393)
T ss_pred -------------cCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 4567777777766666666555544
No 69
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.92 E-value=2.8e-23 Score=218.49 Aligned_cols=367 Identities=15% Similarity=0.069 Sum_probs=213.3
Q ss_pred chhhhHHHHHHHhCCCHhHHHHHH-HHHhhhhhhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHH-HHhhccCChhHH
Q 007665 43 LFGTYSKEIKSTLGYDQTTLNLLS-TCKDLGANVGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWL-AVMKKIAKPKVW 120 (594)
Q Consensus 43 ~~~~~~~~l~~~~~~s~~~~~~~~-~~~~~~~~~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~-a~~~~~~~~~~~ 120 (594)
..+.+...+++++|+|..+.+++. .......+.+++.|+++||+|||++++++..+..++...... ........+...
T Consensus 29 ~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (420)
T PRK09528 29 WFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYVFAPLLQYNILL 108 (420)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355566667888999999999954 444455577999999999999999998876665554332211 100000000111
Q ss_pred HHHHHHHHHhhhhhhhhhhhHhHHhhcCCCceeehhHHHHHhhhhHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHH
Q 007665 121 QMCLYICIGANSQNFANTGSLVTCVKNFPESRGMMLGLMKGFVGLSGAVFTQIYLAIYGNDAKSMILLIAWLPALVSLVF 200 (594)
Q Consensus 121 ~l~~~r~l~G~g~g~~~~~~~~~i~~~fp~~rg~~~gi~~~~~glg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~l~~ 200 (594)
..++.+++.|.+.....+.. ....+.+++++|+..|......++|..+++++.+.+.+.
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-------------------- 167 (420)
T PRK09528 109 GAIVGGIYLGFGFLAGAGAI-EAYIERVSRRSGFEYGRARMWGSLGWALCAFIAGILFNI-------------------- 167 (420)
T ss_pred HHHHHHHHhhhhhccchhhh-hhHHHHHHhhccccchhhHHhhhHHHHHHHHHHHHHHhc--------------------
Confidence 11223333333222222111 112233455688888988888889988888766544321
Q ss_pred HHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHHhhhhcchhhhhhhhhhhhcCC
Q 007665 201 VYTIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCIFVFLPLFIAFREEFAAWQQRK 280 (594)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (594)
+|+..|....... .+.. .+.+..++++++
T Consensus 168 -------------~~~~~f~~~~~~~---~~~~------------------------------~~~~~~~~~~~~----- 196 (420)
T PRK09528 168 -------------NPQINFWLGSGSA---LILL------------------------------VLLFFAKPDAPS----- 196 (420)
T ss_pred -------------CchHhHHHHHHHH---HHHH------------------------------HHHhcccccccc-----
Confidence 3444433111000 0000 000111110000
Q ss_pred CCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCCCCCccHHHhhchHHHHHHHHH
Q 007665 281 QPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKRGEDYGILQALLSIDMLILFLA 360 (594)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 360 (594)
++ + ..++ + ..++ +.......++.+|+|.+|.+.+.
T Consensus 197 ----~~------~------------------------~~~~--~--------~~~~-~~~~~~~~~~~l~~~~~~~l~l~ 231 (420)
T PRK09528 197 ----TA------K------------------------VANA--L--------GANA-SAVSLKDALALLKLPKFWFLVLY 231 (420)
T ss_pred ----hh------h------------------------hccc--h--------hccc-ccccHHHHHHHccCCCeEeehHH
Confidence 00 0 0000 0 0000 00011234567788887765544
Q ss_pred HHhhccccceeeccHHHHHHh----cCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHH
Q 007665 361 TFCGLGCSLTAIDNLGQIGES----LGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVG 436 (594)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~----~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~ 436 (594)
.+...........+.|.++.+ .+.+..+.+.+.++..++..++.+++|++.||+++|+ .+..+.++.+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~------~~~~~~~l~~~~ 305 (420)
T PRK09528 232 VIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKN------ALLLAGTIMAVR 305 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcch------hhHHHHHHHHHH
Confidence 333222222222345555543 3455566778888889999999999999999999873 344555555555
Q ss_pred HHHHhcc-CcchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccch-hhccchhhhhhhhhhHHHhhhhHHHHHhh
Q 007665 437 DVLIAFP-KPGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNC-GQLASPLGSYVLNVIVVGRLYDREAMKQL 514 (594)
Q Consensus 437 ~~~~~~~-~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~-~~~~~~lg~~~~gp~~~g~l~~~~~~~~~ 514 (594)
.+++... +++.++...++.|++.+...+....++.+.+|++.+++.++. .+....+|+.+ +|.+.|.+.|.
T Consensus 306 ~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~i-g~~~~G~l~~~------ 378 (420)
T PRK09528 306 IIGSGFATGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVF-LSTLAGNLYDS------ 378 (420)
T ss_pred HHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHH-HHHHHHHHHHh------
Confidence 5555433 345555566777777777667777888999999999988876 56677888865 89999999998
Q ss_pred hhhhcccccCCCcccccccchHHHHHHHHHHHHHHHHHHHHHH
Q 007665 515 AEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFILV 557 (594)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 557 (594)
.+|+..|.+.+++.++..++.+...
T Consensus 379 ------------------~G~~~~f~~~~~~~~i~~~~~~~~~ 403 (420)
T PRK09528 379 ------------------IGFQGTYLILGGIVLLFTLISVFTL 403 (420)
T ss_pred ------------------hCchHHHHHHHHHHHHHHHHHHHHh
Confidence 5799999998888777665555443
No 70
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.92 E-value=4.4e-23 Score=213.85 Aligned_cols=325 Identities=12% Similarity=0.026 Sum_probs=206.3
Q ss_pred hchhhhHHHHHHHhCCCHhHHHHHHHHHhhhh-hhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhccCChhHH
Q 007665 42 YLFGTYSKEIKSTLGYDQTTLNLLSTCKDLGA-NVGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIAKPKVW 120 (594)
Q Consensus 42 ~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~~~~~ 120 (594)
..+.+..|.+.+++|+|.++.+++.+.+.++. +.+++.|+++||+|||+++..+.++..++..++.++ ++++
T Consensus 8 ~~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~-------~~~~ 80 (377)
T PRK11102 8 DMYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALA-------QTID 80 (377)
T ss_pred HHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHH-------ccHH
Confidence 34667789999999999999999666666655 568899999999999999999999999998887654 6788
Q ss_pred HHHHHHHHHhhhhhhhhhhhHhHHhhcCC-CceeehhHHHHHhhhhHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHH
Q 007665 121 QMCLYICIGANSQNFANTGSLVTCVKNFP-ESRGMMLGLMKGFVGLSGAVFTQIYLAIYGNDAKSMILLIAWLPALVSLV 199 (594)
Q Consensus 121 ~l~~~r~l~G~g~g~~~~~~~~~i~~~fp-~~rg~~~gi~~~~~glg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~l~ 199 (594)
.+++.|++.|++.+...+....++.+++| ++|++++++...+..+|..+++.+.+.+.+.
T Consensus 81 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~------------------- 141 (377)
T PRK11102 81 QLIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVW------------------- 141 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------------
Confidence 88999999999999888888899999998 5699999999988889988887666544332
Q ss_pred HHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHHhhhhcchhhhhhhhhhhhcC
Q 007665 200 FVYTIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCIFVFLPLFIAFREEFAAWQQR 279 (594)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (594)
.+|+..|.....+.+...++ ..+..+++.
T Consensus 142 -------------~~~~~~~~~~~~~~~~~~~~--------------------------------~~~~~~~~~------ 170 (377)
T PRK11102 142 -------------FSWHAIFWVLALAAILAAAL--------------------------------VFFFIPETL------ 170 (377)
T ss_pred -------------cChHHHHHHHHHHHHHHHHH--------------------------------HHHhCCccC------
Confidence 24555544111111000000 000011000
Q ss_pred CCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCCCCCccHHHhhchHHHHHHHH
Q 007665 280 KQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKRGEDYGILQALLSIDMLILFL 359 (594)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 359 (594)
++ + + + .+.+........++.++++.++...+
T Consensus 171 ------~~-----~------------------------~-----~---------~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (377)
T PRK11102 171 ------PK-----E------------------------R-----R---------QPFHLRTTIRNFASLFRHKRVLGYML 201 (377)
T ss_pred ------cc-----c------------------------c-----c---------CCCChHHHHHHHHHHHcChHHHHHHH
Confidence 00 0 0 0 00000000123456778888776655
Q ss_pred HHHhhccccceeeccHHHHHH-hcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHH-HH
Q 007665 360 ATFCGLGCSLTAIDNLGQIGE-SLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAV-GD 437 (594)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i-~~ 437 (594)
..++.......+..+.|.++. ..|+++.+.+....+..++.++++++.|++.||+++|+ .+..+..+..+ +.
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~------~~~~~~~~~~~~~~ 275 (377)
T PRK11102 202 ASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALN------MLRFGLWIQFIMGI 275 (377)
T ss_pred HHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHH------HHHHHHHHHHHHHH
Confidence 554444333444445566554 46999999999999999999999999999999999874 33333332222 22
Q ss_pred H--HHhccC-c-chHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccc-hhhhhhhhhh
Q 007665 438 V--LIAFPK-P-GSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLAS-PLGSYVLNVI 500 (594)
Q Consensus 438 ~--~~~~~~-~-~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~-~lg~~~~gp~ 500 (594)
. .....+ . +...+...+.+.+.+.........+.|..| +++|++.++.+... .++.. .+++
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~-~g~~ 341 (377)
T PRK11102 276 WLVVSALLDLGFWALVVGVAAFVGCVSMISSNAMAVILDEFP-HMAGTASSLAGTLRFGIGAI-VGAL 341 (377)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhcccc-ccchHHHHHHHHHHHHHHHH-HHHH
Confidence 2 111111 1 222223333444444444444455666665 78888888876543 34443 2543
No 71
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.92 E-value=1.6e-22 Score=215.84 Aligned_cols=362 Identities=12% Similarity=0.037 Sum_probs=233.5
Q ss_pred hhchhhhHHHHHHHhCCCHhHHHHHHHHHhhhhhhhhhhhhhhccc-----CchHH-HHHHHHHHHHHHHHHHHHHhhcc
Q 007665 41 TYLFGTYSKEIKSTLGYDQTTLNLLSTCKDLGANVGVLSGLLAEVT-----PPWLV-LLVGSAMNFGGYFMIWLAVMKKI 114 (594)
Q Consensus 41 ~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-----G~r~v-~~~g~~l~~ig~~l~~~a~~~~~ 114 (594)
....+...|.+.++.|.|.++++.++..... .++.+++|+++||+ |||+. ++++.++..++...+++. .
T Consensus 28 ~~~~~~~l~~~l~~~g~~~~~ig~~~~~~~~-~~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~----~ 102 (491)
T PRK11010 28 LALTSGTLQAWMTVENIDLKTIGFFSLVGQA-YVFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFL----E 102 (491)
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-HHHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHc----C
Confidence 3345556788888899999999996444333 25789999999999 99986 556666655665544332 1
Q ss_pred CChhHHHHHHHHHHHhhhhhhhhhhhHhHHhhcCC-CceeehhHHHHHhhhhHHHHHHHHHHHHhCCChHHHHHHHHHHH
Q 007665 115 AKPKVWQMCLYICIGANSQNFANTGSLVTCVKNFP-ESRGMMLGLMKGFVGLSGAVFTQIYLAIYGNDAKSMILLIAWLP 193 (594)
Q Consensus 115 ~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp-~~rg~~~gi~~~~~glg~~i~~~l~~~l~~~~~~~~~~~~~~~~ 193 (594)
+.++++.+.+.+++.|++.+...+...+++.|++| ++|+++.++...+..+|..+++.+...+.+.
T Consensus 103 ~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~------------- 169 (491)
T PRK11010 103 PGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADR------------- 169 (491)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------------
Confidence 22467888889999999999888888899999997 6899999999999989988887555443321
Q ss_pred HHHHHHHHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHHhhhhcchhhhhhhh
Q 007665 194 ALVSLVFVYTIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCIFVFLPLFIAFREEF 273 (594)
Q Consensus 194 ~~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (594)
..+||..|.....+.+. ..+ ..+..+|.+
T Consensus 170 ------------------~~GWr~~f~i~a~l~ll---~~l------------------------------~~~~~~e~~ 198 (491)
T PRK11010 170 ------------------YLGWQGMYWLMAALLIP---CII------------------------------ATLLAPEPT 198 (491)
T ss_pred ------------------ccCHHHHHHHHHHHHHH---HHH------------------------------HHHhcCCCc
Confidence 13677776622211100 000 000011100
Q ss_pred hhhhcCCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCCCCCccHHHhhchHH
Q 007665 274 AAWQQRKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKRGEDYGILQALLSID 353 (594)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 353 (594)
+ .. + . .++.+......+++.++++.
T Consensus 199 ~----------~~------~------------------------~---------------~~~~~~~~~~~l~~~~~~~~ 223 (491)
T PRK11010 199 D----------TI------P------------------------V---------------PKTLEQAVVAPLRDFFGRNN 223 (491)
T ss_pred c----------cc------c------------------------c---------------ccchhhhHHHHHHHHHcCcC
Confidence 0 00 0 0 00000000123456777777
Q ss_pred HHHHHHHHHhhccccceeeccHHHHH-HhcCCCCCcchhhHH-HHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHH
Q 007665 354 MLILFLATFCGLGCSLTAIDNLGQIG-ESLGYPQHTINTFVS-LVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLI 431 (594)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~a~~~~~-~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 431 (594)
+|.+.+..++..........+.++++ +..|+|+.+.+.... ...++.++|.+++|+++||+++|+ . +.++.+
T Consensus 224 ~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~-----~-l~i~~~ 297 (491)
T PRK11010 224 AWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFR-----A-LMIFGI 297 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH-----H-HHHHHH
Confidence 77655443333222222334455555 468999999998874 556899999999999999999763 2 222222
Q ss_pred HHHHH---HHHHhccC-c-chHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhh
Q 007665 432 LSAVG---DVLIAFPK-P-GSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLY 506 (594)
Q Consensus 432 ~~~i~---~~~~~~~~-~-~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~ 506 (594)
+.++. +..+.... + ..+....++..++.|...+...++..+..+++..++.+|+.+....+|..+ ++.+.|.++
T Consensus 298 l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~-~~~~~G~l~ 376 (491)
T PRK11010 298 LQGVSNAGYWLLSITDKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVY-VGPVAGWFV 376 (491)
T ss_pred HHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 22222 22222222 2 223334455555556556667788888999999999999999999999876 566899999
Q ss_pred hHHHHHhhhhhhcccccCCCcccccccchHHHHHHHHHHHHHHHHHHHHHH
Q 007665 507 DREAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFILV 557 (594)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 557 (594)
|. .+|+..|.+..++++++.+....++
T Consensus 377 ~~------------------------~G~~~~f~~~~~~~l~~l~~~~~~~ 403 (491)
T PRK11010 377 EA------------------------HGWPTFYLFSVAAAVPGLLLLLVCR 403 (491)
T ss_pred HH------------------------hChHHHHHHHHHHHHHHHHHHHHHH
Confidence 97 5799999999999988887776664
No 72
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.92 E-value=3.4e-22 Score=208.50 Aligned_cols=332 Identities=13% Similarity=0.023 Sum_probs=215.8
Q ss_pred hhhchhhhHHHHHHHhCCCHhHHHHHHHHHhhhh-hhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhccCChh
Q 007665 40 ATYLFGTYSKEIKSTLGYDQTTLNLLSTCKDLGA-NVGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIAKPK 118 (594)
Q Consensus 40 ~~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~~~ 118 (594)
....+....|++.+++|+|..+.+++.+.+.++. +..++.|+++||+|||+++..+.++..++.+++.++ ++
T Consensus 23 ~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~-------~~ 95 (394)
T PRK11652 23 AQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFA-------HS 95 (394)
T ss_pred HHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHH-------cc
Confidence 3445566789999999999999999665555555 568899999999999999999999988887776544 67
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhHhHHhhcCC-CceeehhHHHHHhhhhHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHH
Q 007665 119 VWQMCLYICIGANSQNFANTGSLVTCVKNFP-ESRGMMLGLMKGFVGLSGAVFTQIYLAIYGNDAKSMILLIAWLPALVS 197 (594)
Q Consensus 119 ~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp-~~rg~~~gi~~~~~glg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 197 (594)
++.+++.|++.|++.+...+.......++++ ++|+++.++...+..++..+++.+.+.+.+
T Consensus 96 ~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~------------------ 157 (394)
T PRK11652 96 LTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTT------------------ 157 (394)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------------------
Confidence 8889999999999998877777777888887 578999999888877887777765544332
Q ss_pred HHHHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHHhhhhcchhhhhhhhhhhh
Q 007665 198 LVFVYTIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCIFVFLPLFIAFREEFAAWQ 277 (594)
Q Consensus 198 l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (594)
..+|+..|.......+. ..+ ...+..+|+
T Consensus 158 --------------~~g~~~~f~~~~~~~~~---~~~-----------------------------~~~~~~~~~----- 186 (394)
T PRK11652 158 --------------LFGWRACYLFLLLLGAG---VTF-----------------------------SMARWMPET----- 186 (394)
T ss_pred --------------ccChHHHHHHHHHHHHH---HHH-----------------------------HHHHhCCcc-----
Confidence 23566655521111100 000 000001100
Q ss_pred cCCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCCCCCccHHHhhchHHHHHH
Q 007665 278 QRKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKRGEDYGILQALLSIDMLIL 357 (594)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 357 (594)
++ + + .++++ .....++.+|+|.+|..
T Consensus 187 -------~~------~------------------------~---------------~~~~~--~~~~~~~~~~~~~~~~~ 212 (394)
T PRK11652 187 -------RP------A------------------------D---------------ARRTR--VLASYRTLLSNRRFNCY 212 (394)
T ss_pred -------Cc------c------------------------c---------------cchhH--HHHHHHHHHcChHHHHH
Confidence 00 0 0 00000 11234667788887765
Q ss_pred HHHHHhhccccceeeccHHHHHHh-cCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHH
Q 007665 358 FLATFCGLGCSLTAIDNLGQIGES-LGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVG 436 (594)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~ 436 (594)
.+..+........+....+.+.++ .|+++.+.+.......++..++.++.+++.||++++. .....+.+...+.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~-----~~~~~~~~~~~~~ 287 (394)
T PRK11652 213 LLMLIGTLAGIAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLM-----WQSVICCLLAGLL 287 (394)
T ss_pred HHHHHHHHHHHHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHH
Confidence 544333222222222334556665 7888888888877777788888888888888776331 2222222222222
Q ss_pred HHHHhc---cCcchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhH
Q 007665 437 DVLIAF---PKPGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDR 508 (594)
Q Consensus 437 ~~~~~~---~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~ 508 (594)
...... .+.+.+....++.|++.+..++.......+.+| +++|++.++.+....+|+.+ ++.+.+.+.+.
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~-~~~~~~~~~~~ 360 (394)
T PRK11652 288 MWIPGWFGVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGL-AALLSAMLPQT 360 (394)
T ss_pred HHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHH-HHHHHHHccCC
Confidence 222211 122345556778888888888888888888886 68899999999888898875 88777776544
No 73
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.91 E-value=7.6e-22 Score=205.58 Aligned_cols=367 Identities=11% Similarity=0.075 Sum_probs=212.9
Q ss_pred hhHHHHHHHHHHHHhhhhhhchhhhHHHHHHHhCCCHhHHHHH-HHHHhhhhhhhhhhhhhhcccCchHHHH-HHHHHHH
Q 007665 23 GRWFMMFASFLIMAGAGATYLFGTYSKEIKSTLGYDQTTLNLL-STCKDLGANVGVLSGLLAEVTPPWLVLL-VGSAMNF 100 (594)
Q Consensus 23 ~~w~~~~~~~l~~~~~g~~~~~~~~~~~l~~~~~~s~~~~~~~-~~~~~~~~~~~~~~G~l~Dr~G~r~v~~-~g~~l~~ 100 (594)
+.|..++..++..+..+ ...+...+.+++++|+|.++++++ +.....+.+.+++.|.+.||+|||+.++ .+.++..
T Consensus 16 ~~~~~~~~~~~~~~~~~--~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~dr~g~r~~~~~~~~~~~~ 93 (393)
T PRK15011 16 TSTAFLIVAFLTGIAGA--LQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGRSDKRGDRKSLIVFCCLLGV 93 (393)
T ss_pred hhHHHHHHHHHHHHHHH--HHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHH
Confidence 44555555444333322 233445556789999999999995 4555667767665555599999998754 4445545
Q ss_pred HHHHHHHHHHhhccCChhHHHHHHHH-HHHhhhhhhhhhhhHhHHhhcCCC-ce--eehhHHHHHhhhhHHHHHHHHHHH
Q 007665 101 GGYFMIWLAVMKKIAKPKVWQMCLYI-CIGANSQNFANTGSLVTCVKNFPE-SR--GMMLGLMKGFVGLSGAVFTQIYLA 176 (594)
Q Consensus 101 ig~~l~~~a~~~~~~~~~~~~l~~~r-~l~G~g~g~~~~~~~~~i~~~fp~-~r--g~~~gi~~~~~glg~~i~~~l~~~ 176 (594)
++.++..++ ++++.+++.+ ++.|.+ +...+....++.++.|+ +| +...++..++.++|..+++++.+.
T Consensus 94 ~~~~~~~~~-------~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~ 165 (393)
T PRK15011 94 LACTLFAWN-------RNYFVLLFVGVFLSSFG-STANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYA 165 (393)
T ss_pred HHHHHHHHh-------hHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 555444333 5677766554 445544 44556665666666653 23 233467777788898888877765
Q ss_pred HhCCChHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhH
Q 007665 177 IYGNDAKSMILLIAWLPALVSLVFVYTIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIA 256 (594)
Q Consensus 177 l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (594)
+.+. .+||..|.......+...+
T Consensus 166 l~~~--------------------------------~gw~~~f~~~~~~~~~~~~------------------------- 188 (393)
T PRK15011 166 LAMG--------------------------------FSFTVMYLSAAVAFIVCGV------------------------- 188 (393)
T ss_pred HHHh--------------------------------cChHHHHHHHHHHHHHHHH-------------------------
Confidence 5443 3555555411111100000
Q ss_pred HHHhhhhcchhhhhhhhhhhhcCCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCC
Q 007665 257 VCIFVFLPLFIAFREEFAAWQQRKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKP 336 (594)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (594)
+.....++. ++ +++ + + .+ ..+.
T Consensus 189 -------~~~~~~~~~------~~---~~~------~------------------------~-----~~-------~~~~ 210 (393)
T PRK15011 189 -------MVWLFLPSM------RK---ELP------L------------------------A-----TG-------TLEA 210 (393)
T ss_pred -------HHHhhcCcc------CC---CCc------c------------------------c-----cc-------cccc
Confidence 000001100 00 000 0 0 00 0000
Q ss_pred CCCCCCccHHHhhchHHHHHHHHHHHhhccccceeeccHHHHHH-hcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHh
Q 007665 337 PKRGEDYGILQALLSIDMLILFLATFCGLGCSLTAIDNLGQIGE-SLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIIL 415 (594)
Q Consensus 337 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g 415 (594)
.+ + +.+..+......+........+..+.|.+.+ +.|+++.+++.+.+...++..+++++.|+++||++
T Consensus 211 ~~--------~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g 280 (393)
T PRK15011 211 PR--------R--NRRDTLLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLG 280 (393)
T ss_pred cc--------c--ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 00 0 0011122222222222222223346777775 56999888888888878888999999999999999
Q ss_pred hhccCCchHHHHHHHHHHHHHHHHHhcc-CcchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhh
Q 007665 416 LKYKVPRPLIMAISLILSAVGDVLIAFP-KPGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGS 494 (594)
Q Consensus 416 ~r~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~ 494 (594)
+|+ .+..+.+...+.+..+... +++...+..++.+++.|...+..+.+..|.+| +++|++.++.+....+|.
T Consensus 281 ~~~------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~~~~~~~~~~~lg~ 353 (393)
T PRK15011 281 KRF------LMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNAIYIGILGGIGMLYFQDLMP-GQAGSATTLYTNTSRVGW 353 (393)
T ss_pred hHH------HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CCcchHHHHHHHHHHHHH
Confidence 873 2333333333333322222 23334444555666666666666777888887 569999999888888998
Q ss_pred hhhhhhHHHhhhhHHHHHhhhhhhcccccCCCcccccccchHHHHHHHHHHHHHHHHHHHHH
Q 007665 495 YVLNVIVVGRLYDREAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFIL 556 (594)
Q Consensus 495 ~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 556 (594)
.+ +|.+.|.+.|. .+|+..|++..++.+++.++.+..
T Consensus 354 ~~-g~~l~G~i~~~------------------------~g~~~~~~~~~~~~~~~~~~~~~~ 390 (393)
T PRK15011 354 II-AGSLAGIVAEI------------------------WNYHAVFWFALVMIIATLFCLLRI 390 (393)
T ss_pred HH-HHHHHHHHHHH------------------------hhhHHHHHHHHHHHHHHHHHHHhh
Confidence 76 99999999987 469999988888777776665544
No 74
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.91 E-value=9e-22 Score=207.51 Aligned_cols=440 Identities=13% Similarity=0.088 Sum_probs=270.6
Q ss_pred chhhhHHHHHHHhCCCHhHHHHHHHHHhhhh-hhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHH
Q 007665 43 LFGTYSKEIKSTLGYDQTTLNLLSTCKDLGA-NVGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIAKPKVWQ 121 (594)
Q Consensus 43 ~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~~~~~~ 121 (594)
..+...+.+.+|+|-+ ...+|+++...++. +..++.|+++|.||||.+++.+.++..+|.++++.+ ++...
T Consensus 62 ~~a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA-------~~~~~ 133 (599)
T PF06609_consen 62 LPASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATA-------QNMNT 133 (599)
T ss_pred ccHHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcC-------CcHHH
Confidence 4456678888999865 66777666666655 568899999999999999999999999999998655 88999
Q ss_pred HHHHHHHHhhhhhhhhhhhHhHHhhcCC-CceeehhHHHHHhhhhHHHHHHHHHHHHhCCChHHHHHHHHHHHH-HHHHH
Q 007665 122 MCLYICIGANSQNFANTGSLVTCVKNFP-ESRGMMLGLMKGFVGLSGAVFTQIYLAIYGNDAKSMILLIAWLPA-LVSLV 199 (594)
Q Consensus 122 l~~~r~l~G~g~g~~~~~~~~~i~~~fp-~~rg~~~gi~~~~~glg~~i~~~l~~~l~~~~~~~~~~~~~~~~~-~~~l~ 199 (594)
++++..+.|+|.|..... ...++|..| |.|+...++.....-....+++.+...+.....|||.+++..... +..+.
T Consensus 134 ~iag~~l~GvgaG~~~~~-~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl 212 (599)
T PF06609_consen 134 FIAGMVLYGVGAGVQELA-ALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVL 212 (599)
T ss_pred HHHHHHHHHHhhHHHHHH-HHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHH
Confidence 999999999998877644 445789998 568776666555443333355666666665566776666655433 33334
Q ss_pred HHHHhccCCCCCC----CchhHHHHHHHHHHHHHHHHHHHHhhhh-----c-ccCCCCccccchhhHHHHhhhhcchhhh
Q 007665 200 FVYTIRPLKVSSH----PNELKVFYEYLYITISLALCLMGLTIAQ-----K-QAHFPHVGYIGSAIAVCIFVFLPLFIAF 269 (594)
Q Consensus 200 ~~~~~~~~~~~~~----~~~~~~f~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (594)
..++++++++.+. ..+++.+..+.+++..+.+..+...+.. . +..|.++......++-.+++.+. .+
T Consensus 213 ~~~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~Lv~F---~~ 289 (599)
T PF06609_consen 213 IFFFYFPPPRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLLVAF---VV 289 (599)
T ss_pred HHHHhCCCchhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHHHHHH---HH
Confidence 4456665553221 2234445566666655444443333332 2 12333333332222211111111 11
Q ss_pred hhhhhhhhcCCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCCCCCccHHHhh
Q 007665 270 REEFAAWQQRKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKRGEDYGILQAL 349 (594)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 349 (594)
-|.. ..+ +++.-+.+++
T Consensus 290 wE~~-------------------------------------------------------------~~~--~~Pl~P~~Lf 306 (599)
T PF06609_consen 290 WEWF-------------------------------------------------------------GAP--KDPLFPHRLF 306 (599)
T ss_pred hhhh-------------------------------------------------------------ccC--CCCcCCHHHh
Confidence 1110 000 0113336788
Q ss_pred ch-HHHHHHHHHHHhhccccceeeccHHHHHHh-cCCCC---CcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchH
Q 007665 350 LS-IDMLILFLATFCGLGCSLTAIDNLGQIGES-LGYPQ---HTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPL 424 (594)
Q Consensus 350 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~---~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~ 424 (594)
|+ |.+....+..++....++......|+.... .+-|+ ...+......+.+..+|.++.|.+.-+++|- ++
T Consensus 307 ~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~-----Kw 381 (599)
T PF06609_consen 307 KDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHI-----KW 381 (599)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccch-----hH
Confidence 87 556665555555433344444445555443 34333 2466777788888899999999988776532 25
Q ss_pred HHHHHHHHHHHHHHHHhcc---CcchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhH
Q 007665 425 IMAISLILSAVGDVLIAFP---KPGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIV 501 (594)
Q Consensus 425 ~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~ 501 (594)
.+.++.+++.+.+.++... +....+...++.|++.|....+.....+-..|+++.|++.|+..+.+.+|+.+ |..+
T Consensus 382 ~li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsI-g~aI 460 (599)
T PF06609_consen 382 QLIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSI-GYAI 460 (599)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHH-HHHH
Confidence 6666666666554444432 23445667888999998877777777777889999999999999999999977 7777
Q ss_pred HHhhhhHHHHHh------------hh------------h----------hhcccccCCC-----cccccccchHHHHHHH
Q 007665 502 VGRLYDREAMKQ------------LA------------E----------KGMTRAMVKD-----LTCIGRQCYRLSFTIL 542 (594)
Q Consensus 502 ~g~l~~~~~~~~------------~~------------~----------~~~~~~~~~~-----~~~~~~~~~~~~f~~~ 542 (594)
...++.....+. +. . +|.+.+-.+- +..+. .+|+.+++..
T Consensus 461 y~~I~~n~~~~~l~~~v~~a~~~aglp~~sl~~li~a~~~~~~~a~~~iPGit~~i~~a~~~A~~~aYa-~ay~~V~~~s 539 (599)
T PF06609_consen 461 YNAIFTNKLPKELPKYVAPAALAAGLPESSLPALIEALAAGNLEALAAIPGITPEIIAAVVAAFQEAYA-HAYRYVYYSS 539 (599)
T ss_pred HHHHHHhhhhHhHHHHHHHHHHhcCCChhhHHHHHHHHhccChhHHhhCCCCCHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 776665432110 00 0 0111111000 01111 3688899999
Q ss_pred HHHHHHHHHHHHHHHhhhhhcc
Q 007665 543 AGVNIFGALITFILVMRTRRYY 564 (594)
Q Consensus 543 ~~~~~~~~~~~~~~~~~~~~~~ 564 (594)
..+.+++++.++++.-..+..+
T Consensus 540 iaFG~vaiiaa~fl~d~~~~mt 561 (599)
T PF06609_consen 540 IAFGVVAIIAALFLGDIDKYMT 561 (599)
T ss_pred HHHHHHHHHHHHHcCChHHhhc
Confidence 9999999988888864444333
No 75
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.91 E-value=3.7e-22 Score=209.02 Aligned_cols=193 Identities=12% Similarity=0.091 Sum_probs=141.0
Q ss_pred HHHhhchHHHHHHHHHHHhhccccceeeccHHHHHHhcCCCC--------CcchhhHHHHhhhhhHhhhhhccccHHHhh
Q 007665 345 ILQALLSIDMLILFLATFCGLGCSLTAIDNLGQIGESLGYPQ--------HTINTFVSLVSIWNYFGRVFAGFVSEIILL 416 (594)
Q Consensus 345 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~--------~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~ 416 (594)
.++.+|+|.++.+.+..++..........+.+.+.++.|.++ .+.+...++..+..+++++..|+++||+++
T Consensus 201 ~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~ 280 (418)
T TIGR00889 201 AFILFKNKRMAIFFFFSMLLGAPLQITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGI 280 (418)
T ss_pred HHHHhcCCCeeeHHHHHHHHHhHHHHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 356788888877766655543332233344566777777654 455888899999999999999999999988
Q ss_pred hccCCchHHHHHHHHHHHHHHHHHhccC--c---chHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhh-ccc
Q 007665 417 KYKVPRPLIMAISLILSAVGDVLIAFPK--P---GSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQ-LAS 490 (594)
Q Consensus 417 r~~~~~~~~~~~~~~~~~i~~~~~~~~~--~---~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~-~~~ 490 (594)
| .++..+.++.+++..++.... . ..+++..++.|++.+...+....++.|.+|++++++++|+.+ ...
T Consensus 281 r------~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~ 354 (418)
T TIGR00889 281 K------KVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCN 354 (418)
T ss_pred H------HHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
Confidence 7 356666666666655444322 1 234456778888888877888889999999999999999997 567
Q ss_pred hhhhhhhhhhHHHhhhhHHHHHhhhhhhcccccCCCcccccccchHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 007665 491 PLGSYVLNVIVVGRLYDREAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFILVMRTRR 562 (594)
Q Consensus 491 ~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 562 (594)
.+|+.+ ||++.|.++|...... ..+|+.+|.+.+++.+++.++.+++.++.++
T Consensus 355 ~lg~~i-Gp~l~G~l~~~~g~~~------------------~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~~ 407 (418)
T TIGR00889 355 GFGSLL-GYILSGVMVEKMFAYG------------------TFDWQTMWLFFAGYIAILAVLFMIFFKYSHN 407 (418)
T ss_pred hhHHHH-HHHHHHHHHHHhcccc------------------CCchHHHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 888865 9999999998721000 1359999999999888888888887765533
No 76
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.91 E-value=1.9e-21 Score=190.32 Aligned_cols=359 Identities=14% Similarity=0.076 Sum_probs=247.8
Q ss_pred HHhhhh-hhchhhhHHHHHHHhCCCHhHHHHHHHHHhhhh-hhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhh
Q 007665 35 MAGAGA-TYLFGTYSKEIKSTLGYDQTTLNLLSTCKDLGA-NVGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMK 112 (594)
Q Consensus 35 ~~~~g~-~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~ 112 (594)
.+..|. .-.-+++.|.+++.|+++..|.+++-.++..+. +.+++.|.+.+|+|+|+.+++|+.++++|+.+.+=+
T Consensus 22 Ffl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pA--- 98 (422)
T COG0738 22 FFLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPA--- 98 (422)
T ss_pred HHHHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhh---
Confidence 344453 445678999999999999999999766666666 558899999999999999999999999998887533
Q ss_pred ccCChhHHHHHHHHHHHhhhhhhhhhhhHhHHhhcCCC-ceeehhHHHHHhhhhHHHHHHHHHHHHhCCChHHHHHHHHH
Q 007665 113 KIAKPKVWQMCLYICIGANSQNFANTGSLVTCVKNFPE-SRGMMLGLMKGFVGLSGAVFTQIYLAIYGNDAKSMILLIAW 191 (594)
Q Consensus 113 ~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp~-~rg~~~gi~~~~~glg~~i~~~l~~~l~~~~~~~~~~~~~~ 191 (594)
...++|..+++.-++.|.|.+...+.+..+++...|+ +...-+++..+.+++|..++|++++.++..+. . .- ..
T Consensus 99 -a~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~-~-~~--~~ 173 (422)
T COG0738 99 -ASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGV-A-LT--MS 173 (422)
T ss_pred -hhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhh-h-hc--cC
Confidence 2236788888999999999999999999999999964 56677999999999999999999887654320 0 00 00
Q ss_pred HHHHHHHHHHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHHhhhhcchhhhhh
Q 007665 192 LPALVSLVFVYTIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCIFVFLPLFIAFRE 271 (594)
Q Consensus 192 ~~~~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (594)
.+......... ...++.+|. .++..+ .++.... ...+
T Consensus 174 ~~~~~~~~~~~---------~~~v~~pYl---~~~~~l--vll~v~~-----------------------------~~~k 210 (422)
T COG0738 174 AAQILAIKGAD---------ASSVQFPYL---ILAGLL--VLLAVLI-----------------------------LLSK 210 (422)
T ss_pred HHHHHHHHHHH---------HHhhhhHHH---HHHHHH--HHHHHHH-----------------------------Hhcc
Confidence 00000000000 012344443 111111 1100000 0000
Q ss_pred hhhhhhcCCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCCCCCccHHHhhch
Q 007665 272 EFAAWQQRKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKRGEDYGILQALLS 351 (594)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 351 (594)
.|+.+ . . ..+..+ .......+++|+
T Consensus 211 -------------~p~~~----------------------------~-----~--------~~~~~~-~~~~~~~~l~~~ 235 (422)
T COG0738 211 -------------LPDLQ----------------------------V-----A--------APSLGA-SGSAGLSSLFQN 235 (422)
T ss_pred -------------CCcCC----------------------------c-----c--------cccccc-cccchHHHHHhC
Confidence 00000 0 0 000000 001145889999
Q ss_pred HHHHHHHHHHHhhccccceeeccHHHHHHh-cCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHH
Q 007665 352 IDMLILFLATFCGLGCSLTAIDNLGQIGES-LGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISL 430 (594)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~ 430 (594)
|.++.-.+..|++.+...+.-++++.|..+ .|.+..+++..++.+.++.++||+++.++..|+... ..++...
T Consensus 236 ~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~------k~Laf~a 309 (422)
T COG0738 236 KHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPE------KYLAFYA 309 (422)
T ss_pred hHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH------HHHHHHH
Confidence 999999999999999999999999999988 789999999999999999999999999888888544 2344444
Q ss_pred HHHHHHHHHHhccCcchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhH
Q 007665 431 ILSAVGDVLIAFPKPGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDR 508 (594)
Q Consensus 431 ~~~~i~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~ 508 (594)
+...+.++.....+........++.|+.++..||...+...+..| ++...+.++. ....+|+++ -|++.|++.|.
T Consensus 310 ~~~ill~~~~~l~~g~v~~~~l~~ig~F~simfPTIfslal~~l~-~~ts~~s~~l-~maivGGAi-iP~l~G~i~d~ 384 (422)
T COG0738 310 LIAILLLLAVALIGGVVALYALFLIGLFNSIMFPTIFSLALKNLG-EHTSVGSGLL-VMAIVGGAI-IPPLQGVIADM 384 (422)
T ss_pred HHHHHHHHHHHHhcChHHHHHHHHHHHHhHHHHHHHHHHHHhccC-ccccccceee-eeheecchH-HHHHHHHHHHh
Confidence 333333333333344445556788999999999999999999998 6655555554 444555555 59999999998
No 77
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.90 E-value=1.4e-20 Score=200.01 Aligned_cols=418 Identities=12% Similarity=0.069 Sum_probs=240.5
Q ss_pred hhhch-hhhHHHHHHHhCCCHhHHHHHHHHH-hhhhhhhhhhhhhhcc-cCchHHHHHHHHHHHHHHHHHHHHHhhccCC
Q 007665 40 ATYLF-GTYSKEIKSTLGYDQTTLNLLSTCK-DLGANVGVLSGLLAEV-TPPWLVLLVGSAMNFGGYFMIWLAVMKKIAK 116 (594)
Q Consensus 40 ~~~~~-~~~~~~l~~~~~~s~~~~~~~~~~~-~~~~~~~~~~G~l~Dr-~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~ 116 (594)
..|.. +.+...+++++|.+.++.+++...+ ....+..+++|+++|| +|||+++++|.+++.+++++++++
T Consensus 29 ~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~------- 101 (489)
T PRK10207 29 GYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMS------- 101 (489)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHh-------
Confidence 33433 4455667889999999999955444 4555667899999999 999999999999999999888654
Q ss_pred hh-HHHHHHHHHHHhhhhhhhhhhhHhHHhhcCC-C--ceeehhHHHHHhhhhHHHHHHHHHHHHhCCChHHHHHHHHHH
Q 007665 117 PK-VWQMCLYICIGANSQNFANTGSLVTCVKNFP-E--SRGMMLGLMKGFVGLSGAVFTQIYLAIYGNDAKSMILLIAWL 192 (594)
Q Consensus 117 ~~-~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp-~--~rg~~~gi~~~~~glg~~i~~~l~~~l~~~~~~~~~~~~~~~ 192 (594)
.+ ...+++.|+++|+|.|...+.....+.|+|| + +|+++.++...+.++|+.+++.+.+.+.+..+|++.+++...
T Consensus 102 ~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i 181 (489)
T PRK10207 102 LLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGA 181 (489)
T ss_pred ccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHH
Confidence 22 2335578999999999999998999999996 3 357789999999999999999999888887778777777543
Q ss_pred HHHHHHHHHHHhccCCCCC-------CCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHHhhhhcc
Q 007665 193 PALVSLVFVYTIRPLKVSS-------HPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCIFVFLPL 265 (594)
Q Consensus 193 ~~~~~l~~~~~~~~~~~~~-------~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (594)
.....++...+.+...++. ..+++.... ...+... ..+........ . + .....+........
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l--~~~~~~~--~~~~~~~~~~~-~--~----~~~~~~~~~~~i~~ 250 (489)
T PRK10207 182 GLIIALLVYFACRGMVKDIGSEPDHKPMSFSKLLL--VLLGSVV--MIFVCAWLMHN-V--E----VANLVLIVLSIVVT 250 (489)
T ss_pred HHHHHHHHHHHcchhhcccCCCCCccchhhhhHHH--HHHHHHH--HHHHHHHHHhh-h--h----HHHHHHHHHHHHHH
Confidence 3333333333333221110 112222111 1111111 11111111110 0 0 00000111111111
Q ss_pred hhhhhhhhhhhhcCCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCCCCCccH
Q 007665 266 FIAFREEFAAWQQRKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKRGEDYGI 345 (594)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (594)
..++.++. +.
T Consensus 251 ~~f~~~~~-------------------------------------------------------------~~--------- 260 (489)
T PRK10207 251 IIFFREAF-------------------------------------------------------------KL--------- 260 (489)
T ss_pred HHHHHHHh-------------------------------------------------------------cC---------
Confidence 11111110 00
Q ss_pred HHhhchHHHHHHHH--HHHhhccccceeeccHHHHHHh-cCCCCC----cchhhHHHHhhhhhHhhhhhccccHHHhhhc
Q 007665 346 LQALLSIDMLILFL--ATFCGLGCSLTAIDNLGQIGES-LGYPQH----TINTFVSLVSIWNYFGRVFAGFVSEIILLKY 418 (594)
Q Consensus 346 ~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~g~s~~----~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~ 418 (594)
.+..|+|.+....+ ...+.+.......+.++.+.++ ...+.. ..+.+.++..+..++..++.+++.||+++|.
T Consensus 261 ~~~~r~r~~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl~~r~ 340 (489)
T PRK10207 261 DKTGRNKMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHLGSKG 340 (489)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHHhhCC
Confidence 01233443332221 1222222222233445555553 221100 1122334445566677778889999998874
Q ss_pred c-CCchHHHHHHHHHHHHHHHHH-------hcc----CcchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchh
Q 007665 419 K-VPRPLIMAISLILSAVGDVLI-------AFP----KPGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCG 486 (594)
Q Consensus 419 ~-~~~~~~~~~~~~~~~i~~~~~-------~~~----~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~ 486 (594)
. .....-+.++.++..++++.+ ... +.+++....++.|+|.+...+...+.+.+..|++.+|.++|+.
T Consensus 341 ~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~ 420 (489)
T PRK10207 341 KDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGMW 420 (489)
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHH
Confidence 2 222223455656666555422 111 1234555678899999999999999999999999999999999
Q ss_pred hccchhhhhhhhhhHHHhhhhHHHHHhhhhhhcccccCCCcccccccchHHHHHHHHHHHHHHHHHHHHHHhhh
Q 007665 487 QLASPLGSYVLNVIVVGRLYDREAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFILVMRT 560 (594)
Q Consensus 487 ~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 560 (594)
++..++|+.+ |..+.+.........+.. .....|...|...++..+++.++.+.+.++-
T Consensus 421 ~l~~~ig~~l-g~~l~~~~~~~~~~~~~~--------------~~~~~~~~~f~~~~~~~~~~~v~~~~~~~~~ 479 (489)
T PRK10207 421 FLTQAAAFLL-GGYVATFTAVPDNITDPL--------------ETLPVYTNVFGKIGLVTLGVAVVMALMVPWL 479 (489)
T ss_pred HHHHHHHHHH-HHHHHHHhccccccccch--------------hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999875 665554332110000000 0012367778877777776666665554433
No 78
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.90 E-value=3.8e-21 Score=199.60 Aligned_cols=326 Identities=13% Similarity=-0.011 Sum_probs=212.8
Q ss_pred hhhhHHHHHHHhCCCHhHHHHHHHHHhhh-hhhhhhhhhhhcccCch----HHHHHHHHHHHHHHHHHHHHHhhccCChh
Q 007665 44 FGTYSKEIKSTLGYDQTTLNLLSTCKDLG-ANVGVLSGLLAEVTPPW----LVLLVGSAMNFGGYFMIWLAVMKKIAKPK 118 (594)
Q Consensus 44 ~~~~~~~l~~~~~~s~~~~~~~~~~~~~~-~~~~~~~G~l~Dr~G~r----~v~~~g~~l~~ig~~l~~~a~~~~~~~~~ 118 (594)
+..+.|.+.+++|.|..+++++.+.+.+. .+.+++.|++.||+||| +.+.++..+... .+.. .+++
T Consensus 23 ~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~-------~~~~--~~~~ 93 (382)
T PRK11128 23 FLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLFAV-------AFWF--GAHS 93 (382)
T ss_pred HhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHHHH-------HHHH--hccc
Confidence 44556777889999999999965555555 46699999999999994 333222221111 1111 1257
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhHhHHhhcCCCceeehhHHHHHhhhhHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHH
Q 007665 119 VWQMCLYICIGANSQNFANTGSLVTCVKNFPESRGMMLGLMKGFVGLSGAVFTQIYLAIYGNDAKSMILLIAWLPALVSL 198 (594)
Q Consensus 119 ~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp~~rg~~~gi~~~~~glg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~l 198 (594)
++.+++.|++.|++.+...+...+++.++ +++|+++.|.......+|..++|++.+.+.+.
T Consensus 94 ~~~l~i~~~l~g~~~~~~~~~~~a~~~~~-~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~------------------ 154 (382)
T PRK11128 94 FWLLFVAIGLFNLFFSPLVPLTDALANTW-QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSW------------------ 154 (382)
T ss_pred HHHHHHHHHHHHHHHcccccHHHHHHHHH-HhhccCCcchHHHHHHHHHHHHHHHHHHHHHH------------------
Confidence 88888999999998887777666665554 66788999998888889999988777665543
Q ss_pred HHHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHHhhhhcchhhhhhhhhhhhc
Q 007665 199 VFVYTIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCIFVFLPLFIAFREEFAAWQQ 278 (594)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (594)
.+||..|...... ..+.. ++ ....++.
T Consensus 155 --------------~g~~~~f~~~~~~---~~~~~-----------------------------~~--~~~~~~~----- 181 (382)
T PRK11128 155 --------------FGEQAILWILTAG---VASML-----------------------------LG--QLLRPTI----- 181 (382)
T ss_pred --------------cChhHHHHHHHHH---HHHHH-----------------------------HH--HHccCCC-----
Confidence 2555544311100 00000 00 0000000
Q ss_pred CCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCCCCCccHHHhhchHHHHHHH
Q 007665 279 RKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKRGEDYGILQALLSIDMLILF 358 (594)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 358 (594)
+++ + + + .++ ......+.++.+|+|.+|...
T Consensus 182 -----~~~------~------------------------~-----~--------~~~--~~~~~~~~~~i~~~~~~~~~~ 211 (382)
T PRK11128 182 -----MPQ------G------------------------E-----S--------RQQ--ESAGWPAWKALLKEPTVWRFL 211 (382)
T ss_pred -----CCc------c------------------------c-----c--------ccc--cccccchHHHHHcChhHHHHH
Confidence 000 0 0 0 000 000113468899999999877
Q ss_pred HHHHhhccccceeeccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHH
Q 007665 359 LATFCGLGCSLTAIDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDV 438 (594)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~ 438 (594)
+..++............+.+.++.|+++.+.+...++..++..+..++.|++.||+++|+ .+..+.++.+++.+
T Consensus 212 ~~~~l~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~------~l~~~~~~~~~~~~ 285 (382)
T PRK11128 212 LCVSLLQGSHAAYYGFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARD------LLLLSAICGVVRWG 285 (382)
T ss_pred HHHHHHHHHhHhHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH------HHHHHHHHHHHHHH
Confidence 665554444444455667777888999888999988888999999999999999988773 45566666666665
Q ss_pred HHhccC-cchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhh-ccchhhhhhhhhhHHHhhhhH
Q 007665 439 LIAFPK-PGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQ-LASPLGSYVLNVIVVGRLYDR 508 (594)
Q Consensus 439 ~~~~~~-~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~-~~~~lg~~~~gp~~~g~l~~~ 508 (594)
++...+ .+.+++..++.|++.+...+....+..+. +++++++.++..+ ....+|..+ ||.+.|.++|.
T Consensus 286 ~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~i-g~~i~G~l~~~ 355 (382)
T PRK11128 286 LMGSTTALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAI-MTVLSGFLYQH 355 (382)
T ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHh
Confidence 554433 35556677888998888777777777776 4566788888876 445566554 89999999998
No 79
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.90 E-value=1.4e-22 Score=199.87 Aligned_cols=442 Identities=15% Similarity=0.050 Sum_probs=255.0
Q ss_pred hhhHHHHHHHHHHHHhhh-hhhchhhhHHHHHHHh-C-------CCHhHHHHHHHHHhhhhhh-hhhhhhhhcccCchHH
Q 007665 22 RGRWFMMFASFLIMAGAG-ATYLFGTYSKEIKSTL-G-------YDQTTLNLLSTCKDLGANV-GVLSGLLAEVTPPWLV 91 (594)
Q Consensus 22 ~~~w~~~~~~~l~~~~~g-~~~~~~~~~~~l~~~~-~-------~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~v 91 (594)
+++...+..+-+..+..+ +.++++...|-+...+ | ++..-.+.+....++|.++ +++.|++.||+|||++
T Consensus 37 w~~fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~v 116 (538)
T KOG0252|consen 37 WKHFKAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKV 116 (538)
T ss_pred HHHHHHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhh
Confidence 344444444444445555 6788888888776533 2 3445566688888899977 8899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHhhhhhhhhhhhHhHHhhcCC-CceeehhHHHHHhhhhHHHHH
Q 007665 92 LLVGSAMNFGGYFMIWLAVMKKIAKPKVWQMCLYICIGANSQNFANTGSLVTCVKNFP-ESRGMMLGLMKGFVGLSGAVF 170 (594)
Q Consensus 92 ~~~g~~l~~ig~~l~~~a~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp-~~rg~~~gi~~~~~glg~~i~ 170 (594)
+...+++++++++++++..+......-...++++|++.|+|.|.-||.+.++.+|.-- ++||.-.+.+.+..+.|.+.+
T Consensus 117 YG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG 196 (538)
T KOG0252|consen 117 YGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAG 196 (538)
T ss_pred hhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhc
Confidence 9999999999998776543332222235778899999999999999999888888885 579999999888888877666
Q ss_pred HHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCch-hHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCcc
Q 007665 171 TQIYLAIYGNDAKSMILLIAWLPALVSLVFVYTIRPLKVSSHPNE-LKVFYEYLYITISLALCLMGLTIAQKQAHFPHVG 249 (594)
Q Consensus 171 ~~l~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (594)
+.+.. ++...+.++.+....... +..|+....++.+.++.++
T Consensus 197 ~ivt~----------------------Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~l--------------- 239 (538)
T KOG0252|consen 197 GIVAL----------------------IVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVL--------------- 239 (538)
T ss_pred cHHHH----------------------HHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHH---------------
Confidence 53321 111223333332211111 1222211112111111110
Q ss_pred ccchhhHHHHhhhhcchhhhhhhhhhhhcCCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCc
Q 007665 250 YIGSAIAVCIFVFLPLFIAFREEFAAWQQRKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPC 329 (594)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (594)
+..+. -++.++++.... .+..++.++ .++..+.+.+ +++.
T Consensus 240 --------------y~Rl~-M~Et~~Y~al~~------------~~~~~a~~d----~~k~~~~~~~---------~~~~ 279 (538)
T KOG0252|consen 240 --------------YFRLK-MPETARYTALVS------------KKLKQAAGD----MKKVLSVDIE---------AEST 279 (538)
T ss_pred --------------Hhhhc-CCcchhHHHHhh------------cCHhhhhhc----cccccccccc---------hhhc
Confidence 00110 111122211100 000000000 0000000000 0000
Q ss_pred CCCCCCCCCCCCCccHHHhhchHHH---HHHHHHHHhhccccceeeccHHHHHHhcCCCCCcchh--------hHHHHhh
Q 007665 330 CGNIFKPPKRGEDYGILQALLSIDM---LILFLATFCGLGCSLTAIDNLGQIGESLGYPQHTINT--------FVSLVSI 398 (594)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~--------~~~~~~i 398 (594)
.+.....++. ....+.+.+..+.. ......-|+.-...+..--+...+++..|+.+.+... .-.+..+
T Consensus 280 ~~~~~~~~~~-~~~~F~~~f~~~hg~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~ 358 (538)
T KOG0252|consen 280 AESDVPPPSN-SFGLFSRLFLRWHGKHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAV 358 (538)
T ss_pred cccCCCCccc-ccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHH
Confidence 0000111111 11123333333321 1222233333334444444567788888876665544 1123333
Q ss_pred -hhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhccCc-----chHHH-HHHHHHHHhhhhHHHHHHHHH
Q 007665 399 -WNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAFPKP-----GSVYV-ASLLVGFSYGAQLTLLFIIIS 471 (594)
Q Consensus 399 -~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~~~~-----~~~~~-~~~l~G~~~g~~~~~~~~~~~ 471 (594)
....|..+..+++|+.||| ++.+.++.++++.++.+..+.. ..+.+ ..+..-++.-+.-.....+.+
T Consensus 359 ~~~vPGyw~tv~~id~iGRk------~iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpa 432 (538)
T KOG0252|consen 359 CSTVPGYWFTVYFIDIIGRK------YIQLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPA 432 (538)
T ss_pred HccCCceeEEEEEeehhhhH------HHHHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeeh
Confidence 3344888889999999988 6888898888888777764322 11222 222222333333344445678
Q ss_pred HhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhhcccccCCCcccccccchHHHHHHHHHHHHHHHH
Q 007665 472 ELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGAL 551 (594)
Q Consensus 472 ~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~ 551 (594)
|.||.+.||+.+|+....+-.|+.+ +...++++.++.... ..+++.+|++++++++++.+
T Consensus 433 E~FParvR~t~hGIsAA~GK~GAiv-g~~~F~~~t~~~yp~-------------------~~g~~~v~~i~~~~~~~gi~ 492 (538)
T KOG0252|consen 433 EIFPARVRSTCHGISAASGKAGAIV-GAFGFLYLTDHNYPP-------------------NIGVRNVFIILAGCMLLGIL 492 (538)
T ss_pred hhchHHHhhhhhhHHHHhccchHHH-HHHHhhHhhhccCCc-------------------cccchHHHHHHHHHHHHhHh
Confidence 9999999999999999999999876 877777776642100 25799999999999999998
Q ss_pred HHHHHHhhhhhccchhH
Q 007665 552 ITFILVMRTRRYYSGDI 568 (594)
Q Consensus 552 ~~~~~~~~~~~~~~~~~ 568 (594)
..+++. |+++++.+++
T Consensus 493 ~T~l~p-Etk~~~leei 508 (538)
T KOG0252|consen 493 FTLLIP-ETKGKSLEEI 508 (538)
T ss_pred eeEEee-cccccCHHHh
Confidence 888876 8888777555
No 80
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.90 E-value=4.6e-22 Score=207.45 Aligned_cols=339 Identities=15% Similarity=0.047 Sum_probs=212.2
Q ss_pred HHHHhCCCHhHHHHHHHHHhhhh-hhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHH
Q 007665 51 IKSTLGYDQTTLNLLSTCKDLGA-NVGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIAKPKVWQMCLYICIG 129 (594)
Q Consensus 51 l~~~~~~s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~~~~~~l~~~r~l~ 129 (594)
+++|.+....+++++.+.+.++. ++.+++|.|.||++..+.+....+..++-.++.+.. +|++.+++.|++.
T Consensus 72 ~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~-------~s~~~~ialr~ll 144 (495)
T KOG2533|consen 72 LKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAV-------HSFPGLIALRFLL 144 (495)
T ss_pred CccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHH-------hhhHHHHHHHHHH
Confidence 45899999999999665555555 668899999999998887777666555544443332 7899999999999
Q ss_pred hhhhhhhhhhhHhHHhhcCC-CceeehhHHHHHhhhhHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHhccCC
Q 007665 130 ANSQNFANTGSLVTCVKNFP-ESRGMMLGLMKGFVGLSGAVFTQIYLAIYGNDAKSMILLIAWLPALVSLVFVYTIRPLK 208 (594)
Q Consensus 130 G~g~g~~~~~~~~~i~~~fp-~~rg~~~gi~~~~~glg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 208 (594)
|+.++..+|+...++..||. ++||+.+|++.+..++|+++++.+..++.+- ..
T Consensus 145 Gl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~--------------------------~~ 198 (495)
T KOG2533|consen 145 GLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKL--------------------------NG 198 (495)
T ss_pred HHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhh--------------------------cC
Confidence 99999999999999999996 5899999999999999999999887765320 00
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHHhhhhcchhhhhhhhhhhhcCCCCCCCccc
Q 007665 209 VSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCIFVFLPLFIAFREEFAAWQQRKQPTPASAV 288 (594)
Q Consensus 209 ~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (594)
.....+||+.|..-..+.+..++.. ++.++-.+++.+...+
T Consensus 199 ~~~~~gW~~~FiI~G~i~~~~gi~~------------------------------f~~lp~~P~~~~fl~~--------- 239 (495)
T KOG2533|consen 199 SGGLAGWRWLFIIEGVITLVLGIVV------------------------------FFFLPDNPSKAWFLTD--------- 239 (495)
T ss_pred CCCcCCceeehhHHHHHHHHHHheE------------------------------EEEecCChhhccccch---------
Confidence 0113577777762222211111111 1111000000000000
Q ss_pred ccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCCCCCccHHHhhchHHHHHHHHHHHhhcccc
Q 007665 289 VIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKRGEDYGILQALLSIDMLILFLATFCGLGCS 368 (594)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 368 (594)
+ |+ ... .++..+++ . ...+++ .+...+++++++|..|.+.+..++.....
T Consensus 240 ---~-------ek-~~~-~~~~~~~~-----~------------~~~~~~-~~~~~~~~a~~dp~vw~~~l~~~~~~lv~ 289 (495)
T KOG2533|consen 240 ---E-------EK-ELV-VERLRESP-----S------------GGIENK-FKWKGFKEALKDPGVWPFSLCYFFLKLVN 289 (495)
T ss_pred ---H-------HH-HHH-HHHHHhcc-----C------------CCcccc-cCHHHHHHHHhchhHHHHHHHHHHHhhcc
Confidence 0 00 000 00000000 0 000001 23467899999999999999999999998
Q ss_pred ceeeccHHHHHHh-cCCCCCcchhhHHHHhhhhhHhhhhhccccHHH----hhhccCCchHHHHHHHHHHHHHHHHHhcc
Q 007665 369 LTAIDNLGQIGES-LGYPQHTINTFVSLVSIWNYFGRVFAGFVSEII----LLKYKVPRPLIMAISLILSAVGDVLIAFP 443 (594)
Q Consensus 369 ~~~~~~~~~~~~~-~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~----g~r~~~~~~~~~~~~~~~~~i~~~~~~~~ 443 (594)
+.+.+++|.++++ .|+|..++..+...+.++++++.+++|+++||. .+|. ......++...++...+...
T Consensus 290 ~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~-----~~~~~~~~~~~~g~~~l~~~ 364 (495)
T KOG2533|consen 290 YGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRL-----LFIVFLCLYAIIGAISLLAA 364 (495)
T ss_pred ccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHH-----HHHHHHHHHHHHHHHHHHhh
Confidence 9999999999998 569999999999999999999999999999994 3331 33333444445553443333
Q ss_pred C-cchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCc-cccccchhhccchhhhhh
Q 007665 444 K-PGSVYVASLLVGFSYGAQLTLLFIIISELFGLKY-YSTLFNCGQLASPLGSYV 496 (594)
Q Consensus 444 ~-~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~-~g~~~g~~~~~~~lg~~~ 496 (594)
. .............+.+...+......++....+. +-+..+....+.+.++.+
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~ 419 (495)
T KOG2533|consen 365 AVLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAI 419 (495)
T ss_pred ccchHHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHh
Confidence 2 3333333333344455555555555555554332 222333333444444433
No 81
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.90 E-value=2.2e-21 Score=229.13 Aligned_cols=354 Identities=11% Similarity=0.012 Sum_probs=225.0
Q ss_pred HHHHHhCCCHhH-HHHHHHHHhhh-hhhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHH
Q 007665 50 EIKSTLGYDQTT-LNLLSTCKDLG-ANVGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIAKPKVWQMCLYIC 127 (594)
Q Consensus 50 ~l~~~~~~s~~~-~~~~~~~~~~~-~~~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~~~~~~l~~~r~ 127 (594)
.+.++.+.+... .++....+.+. .++++++|+++||||||+++........+...+..+++ .. ++++.+++.|+
T Consensus 41 ~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~--~~--~s~~~l~~~~~ 116 (1140)
T PRK06814 41 GLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGF--HL--NSVPLLFAALF 116 (1140)
T ss_pred HhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHH--HH--hhHHHHHHHHH
Confidence 444555544444 55555455444 47799999999999999986432221111111111111 11 57899999999
Q ss_pred HHhhhhhhhhhhhHhHHhhcCC-CceeehhHHHHHhhhhHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHhcc
Q 007665 128 IGANSQNFANTGSLVTCVKNFP-ESRGMMLGLMKGFVGLSGAVFTQIYLAIYGNDAKSMILLIAWLPALVSLVFVYTIRP 206 (594)
Q Consensus 128 l~G~g~g~~~~~~~~~i~~~fp-~~rg~~~gi~~~~~glg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 206 (594)
++|++.++..+...+++.+++| ++|++++|+..++.++|.++++.+++.+....+|++.++......+..++.
T Consensus 117 l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~------ 190 (1140)
T PRK06814 117 LMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVLGWLA------ 190 (1140)
T ss_pred HHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHH------
Confidence 9999999999999999999997 579999999999999999999988877665443333321111111100000
Q ss_pred CCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHHhhhhcchhhhhhhhhhhhcCCCCCCCc
Q 007665 207 LKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCIFVFLPLFIAFREEFAAWQQRKQPTPAS 286 (594)
Q Consensus 207 ~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (594)
.+.+.+.+ + . ++.
T Consensus 191 -----------------------------------------------------------~~~~~~~~-----~-~--~~~ 203 (1140)
T PRK06814 191 -----------------------------------------------------------SLFIPKTG-----N-A--APD 203 (1140)
T ss_pred -----------------------------------------------------------HhhCCCCC-----C-C--CCC
Confidence 00000000 0 0 000
Q ss_pred ccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCCCCCccHHHhhchHHHHHHHHHHHhhcc
Q 007665 287 AVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKRGEDYGILQALLSIDMLILFLATFCGLG 366 (594)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 366 (594)
. . ............++.+.+++.+|...+..++...
T Consensus 204 ------~------------------------~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (1140)
T PRK06814 204 ------L------------------------K--------------IDRNIIRSTITLLKYAKADKRIWLAILGISWFWL 239 (1140)
T ss_pred ------C------------------------e--------------eccchHHHHHHHHHHHhcCchHHHHHHHHHHHHH
Confidence 0 0 0000000001235677788888887777666555
Q ss_pred ccceeeccHHHHHHh-cCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhc---
Q 007665 367 CSLTAIDNLGQIGES-LGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAF--- 442 (594)
Q Consensus 367 ~~~~~~~~~~~~~~~-~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~--- 442 (594)
....+..++|.|.++ +|.++.+++.+++..+++.++|.++.|+++|+..++. . +..+.++.++..+.+..
T Consensus 240 ~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~-----~-~~~~~~~~~~~~~~l~~~~~ 313 (1140)
T PRK06814 240 VGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLL-----Y-VPIGALLMGLFGLDLAFASS 313 (1140)
T ss_pred HHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeee-----e-ehHHHHHHHHHHHHHHhccc
Confidence 545555678888875 5899999999999999999999999999998765442 1 11111121111111111
Q ss_pred ------------------cCcchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHh
Q 007665 443 ------------------PKPGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGR 504 (594)
Q Consensus 443 ------------------~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~ 504 (594)
.+.+.+++..+++|++.+...+...+++.+.+|++++|+++|+.++...++..+ ++++.|.
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~i-g~~~~g~ 392 (1140)
T PRK06814 314 SVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVA-GTIILAL 392 (1140)
T ss_pred ccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHH-HHHHHHH
Confidence 223445566788899999888889999999999999999999999999998876 8888888
Q ss_pred hhhHHHHHhhhhhhcccccCCCcccccccchHHHHHHHHHHHHHHHHHHH
Q 007665 505 LYDREAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITF 554 (594)
Q Consensus 505 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 554 (594)
+.+. ..++...+++.+++.++..+..+
T Consensus 393 l~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~ 419 (1140)
T PRK06814 393 LQAL-----------------------GFSIPWIILFIALANLIVAILIL 419 (1140)
T ss_pred HHHh-----------------------ccCHHHHHHHHHHHHHHHHHHHH
Confidence 8755 24677776666555444444333
No 82
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.90 E-value=1e-20 Score=197.48 Aligned_cols=361 Identities=12% Similarity=0.045 Sum_probs=218.2
Q ss_pred hHHHHHHHhCCCHhHHHHHHHH-HhhhhhhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHH-HHhhccCChhHHHHHH
Q 007665 47 YSKEIKSTLGYDQTTLNLLSTC-KDLGANVGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWL-AVMKKIAKPKVWQMCL 124 (594)
Q Consensus 47 ~~~~l~~~~~~s~~~~~~~~~~-~~~~~~~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~-a~~~~~~~~~~~~l~~ 124 (594)
+.+.+++++|.|..+.+++.+. .....+.+++.|+++||+|||++++.+.+...++.....+ ........+.+..+++
T Consensus 25 ~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (396)
T TIGR00882 25 FPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPLLQSNILVGAIV 104 (396)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 3344577899999999995444 4455577999999999999999998877665554332211 1111000012333456
Q ss_pred HHHHHhhhhhhhhhhhHhHHhhcCCCceeehhHHHHHhhhhHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHh
Q 007665 125 YICIGANSQNFANTGSLVTCVKNFPESRGMMLGLMKGFVGLSGAVFTQIYLAIYGNDAKSMILLIAWLPALVSLVFVYTI 204 (594)
Q Consensus 125 ~r~l~G~g~g~~~~~~~~~i~~~fp~~rg~~~gi~~~~~glg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~ 204 (594)
.+++.|++.+...+....+..+. .++++...|......++|.++++.+.+.+.+
T Consensus 105 ~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~------------------------- 158 (396)
T TIGR00882 105 GGLYLGFVFSAGAGAIEAYIEKV-SRNSNFEYGKARMFGCVGWALCASIAGILFS------------------------- 158 (396)
T ss_pred HHHHHHHHhccchhhHHHHHHHh-hhhcccccchhhhhcccHHHHHHHHHhhhhc-------------------------
Confidence 67888887776666555444443 2345567777777777888887766543322
Q ss_pred ccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHHhhhhcchhhhhhhhhhhhcCCCCCC
Q 007665 205 RPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCIFVFLPLFIAFREEFAAWQQRKQPTP 284 (594)
Q Consensus 205 ~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (594)
.+|+..|.....++++..+. .+..+++.+
T Consensus 159 --------~~~~~~f~~~~~~~~~~~~~---------------------------------~~~~~~~~~---------- 187 (396)
T TIGR00882 159 --------IDPQIVFWLGSGFALILMLL---------------------------------LMFAKPKAP---------- 187 (396)
T ss_pred --------cCchHHHHHHHHHHHHHHHH---------------------------------HHHhCCCCc----------
Confidence 24555544211111100000 000010000
Q ss_pred CcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCCCCCccHHHhhchHHHHHHHHHHHhh
Q 007665 285 ASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKRGEDYGILQALLSIDMLILFLATFCG 364 (594)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 364 (594)
++ + +.++ .. ..++ +..+..+.++.+|+|.+|.+.+..++.
T Consensus 188 -~~-----~------------------------~~~~--~~-------~~~~-~~~~~~~~~~~l~~~~~~~~~l~~~~~ 227 (396)
T TIGR00882 188 -SS-----A------------------------TVAN--AL-------GANA-SAFSLKLALELFRQRKFWMFVLYVVGV 227 (396)
T ss_pred -hh-----h------------------------hhhc--cc-------cccc-CCCCHHHHHHHHcCCcHHHHHHHHHHH
Confidence 00 0 0000 00 0000 001113457888999887765554443
Q ss_pred ccccceeeccHHHHHHhc----CCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHH
Q 007665 365 LGCSLTAIDNLGQIGESL----GYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLI 440 (594)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~----g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~ 440 (594)
.........+.+.+.++. +.+....+...++..+...++.+..|++.||+++|+ .+.++.++.++...+.
T Consensus 228 ~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~------~l~~~~~l~~l~~~~~ 301 (396)
T TIGR00882 228 ACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKN------ALLIAGTIMSVRIIGS 301 (396)
T ss_pred HHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccch------hHHHHHHHHHHHHHHH
Confidence 332223333456665543 444455677788888899999999999999998873 3455555555555554
Q ss_pred hc-cCcchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccch-hhccchhhhhhhhhhHHHhhhhHHHHHhhhhhh
Q 007665 441 AF-PKPGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNC-GQLASPLGSYVLNVIVVGRLYDREAMKQLAEKG 518 (594)
Q Consensus 441 ~~-~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~-~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~ 518 (594)
.. .+++.++...++.|++..........+..+.++++.+++..+. .+....+|+.+ +|.+.|++.|.
T Consensus 302 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~-~~~l~G~l~~~---------- 370 (396)
T TIGR00882 302 SFATTALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIF-LSTLAGNMYDS---------- 370 (396)
T ss_pred HhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHH-HHHhHHHHHHh----------
Confidence 43 3445556667777877766655566677788888888887776 56778888876 89999999998
Q ss_pred cccccCCCcccccccchHHHHHHHHHHHHHHHHHHHH
Q 007665 519 MTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFI 555 (594)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~ 555 (594)
.+|+..|.+.+++.++..+...+
T Consensus 371 --------------~G~~~~f~~~~~~~~i~~~~~~~ 393 (396)
T TIGR00882 371 --------------IGFQGAYLVLGCIVLLFTLISVF 393 (396)
T ss_pred --------------cccHHHHHHHHHHHHHHHHHHHH
Confidence 57999999998888777766654
No 83
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.89 E-value=4.5e-21 Score=227.16 Aligned_cols=346 Identities=13% Similarity=0.036 Sum_probs=218.5
Q ss_pred hhhhHHHHHHHhCCCHhH--HHHHHHHHhhhh-hhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhccCChhHH
Q 007665 44 FGTYSKEIKSTLGYDQTT--LNLLSTCKDLGA-NVGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIAKPKVW 120 (594)
Q Consensus 44 ~~~~~~~l~~~~~~s~~~--~~~~~~~~~~~~-~~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~~~~~ 120 (594)
...+.+.+..+++.+... .+++.+.+.++. ++++++|+++||+|||++++++.++..++.+++.++. .. ++++
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~--~~--~~~~ 104 (1146)
T PRK08633 29 KILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAY--YL--GWFW 104 (1146)
T ss_pred HHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHH--HH--ccHH
Confidence 344455666777776444 566555555555 6689999999999999999998877666655543331 11 4688
Q ss_pred HHHHHHHHHhhhhhhhhhhhHhHHhhcCC-CceeehhHHHHHhhhhHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHH
Q 007665 121 QMCLYICIGANSQNFANTGSLVTCVKNFP-ESRGMMLGLMKGFVGLSGAVFTQIYLAIYGNDAKSMILLIAWLPALVSLV 199 (594)
Q Consensus 121 ~l~~~r~l~G~g~g~~~~~~~~~i~~~fp-~~rg~~~gi~~~~~glg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~l~ 199 (594)
.+++.|+++|++.+...++..+++.+++| ++|++++|+...+..+|.++++.+.+.+.....
T Consensus 105 ~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~----------------- 167 (1146)
T PRK08633 105 LAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVN----------------- 167 (1146)
T ss_pred HHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhc-----------------
Confidence 89999999999999999999999999997 579999999999999999888877765543200
Q ss_pred HHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHHhhhhcchhhhhhhhhhhhcC
Q 007665 200 FVYTIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCIFVFLPLFIAFREEFAAWQQR 279 (594)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (594)
. ........|.+.+. ...+...+..+.. .+.+++. +.
T Consensus 168 -----~-~~~~~~~~~~~~~~---~~~~~~~~~~~~~-----------------------------~~~~~~~-~~---- 204 (1146)
T PRK08633 168 -----G-NTPSEILGRIAPAG---LVLLAVAVLGLIF-----------------------------AYRLPKV-PA---- 204 (1146)
T ss_pred -----c-ccccccccchHHHH---HHHHHHHHHHHHH-----------------------------HhcCcCC-CC----
Confidence 0 00000001111111 1100000000000 0000000 00
Q ss_pred CCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCCCCCccHHHhhchHHHHHHHH
Q 007665 280 KQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKRGEDYGILQALLSIDMLILFL 359 (594)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 359 (594)
... . .+ +. ............++.+++++.+|...+
T Consensus 205 -----~~~------------------------------~--~~---~~-----~~~~~~~~~~~~~~~l~~~~~~~~~~~ 239 (1146)
T PRK08633 205 -----AAP------------------------------E--VF---DK-----KKYLFPKLLWRNLKLLRSDRVLWLAII 239 (1146)
T ss_pred -----CCc------------------------------c--cc---cc-----cccccHHHHHHHHHHHhcCcHHHHHHH
Confidence 000 0 00 00 000000000123456777888887666
Q ss_pred HHHhhccccceeeccHHHHHH-hcCCCCC-cchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHH
Q 007665 360 ATFCGLGCSLTAIDNLGQIGE-SLGYPQH-TINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGD 437 (594)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~-~~g~s~~-~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~ 437 (594)
..++.......+..++|.+++ .+|+++. +.+++.+...++.++|.+++|+++||++++. .+.++.++.+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~------~~~~~~~~~~~~~ 313 (1146)
T PRK08633 240 GLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELG------LVPLGALGLALSL 313 (1146)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEcc------chhHHHHHHHHHH
Confidence 555544444445556677765 4699888 8899999999999999999999999987653 3334444444444
Q ss_pred HHHhcc-CcchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhh
Q 007665 438 VLIAFP-KPGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRL 505 (594)
Q Consensus 438 ~~~~~~-~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l 505 (594)
+++... +.+.+++..+++|++.+...+...+++.+.+|++.+|+++|+.++...++.++ ++.+.+.+
T Consensus 314 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~-~~~~~~~l 381 (1146)
T PRK08633 314 FLLPTAPSLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLL-FLALTTLF 381 (1146)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHH-HHHHHHHH
Confidence 444332 33445566788899988888888899999999999999999999999888864 66454444
No 84
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.89 E-value=3.3e-23 Score=205.37 Aligned_cols=369 Identities=13% Similarity=0.034 Sum_probs=229.5
Q ss_pred hhHHHHHHHHHHHHhh-hhhhchhhhHHHHHHHhCCCHhHHHHHHHHHhhh-hhhhhhhhhhhcccCchHHHHHHHHHHH
Q 007665 23 GRWFMMFASFLIMAGA-GATYLFGTYSKEIKSTLGYDQTTLNLLSTCKDLG-ANVGVLSGLLAEVTPPWLVLLVGSAMNF 100 (594)
Q Consensus 23 ~~w~~~~~~~l~~~~~-g~~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~-~~~~~~~G~l~Dr~G~r~v~~~g~~l~~ 100 (594)
+.++.+...+++.+.. .+.|..+...+.+++.||+++++.+++.+...+. .+++|+.|.++|||.||+++.+|..++.
T Consensus 30 ~~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~ 109 (493)
T KOG1330|consen 30 SPTLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWT 109 (493)
T ss_pred cchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHH
Confidence 4445555555555555 5889999999999999999999999976665555 4779999999999999999999999999
Q ss_pred HHHHHHHHHHhhccCChhHHHHHHHHHHHhhhhhhhhhhhHhHHhhcCCC-ceeehhHHHHHhhhhHHHHHHHHHHHHhC
Q 007665 101 GGYFMIWLAVMKKIAKPKVWQMCLYICIGANSQNFANTGSLVTCVKNFPE-SRGMMLGLMKGFVGLSGAVFTQIYLAIYG 179 (594)
Q Consensus 101 ig~~l~~~a~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp~-~rg~~~gi~~~~~glg~~i~~~l~~~l~~ 179 (594)
++++.++++ ..||++.++|.+.|+|.+...+.+...++|.||+ +|++++++.+.+..+|+.++-.+.+.+.+
T Consensus 110 ~Av~~~~fs-------~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~ 182 (493)
T KOG1330|consen 110 LAVFASGFS-------NHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVAS 182 (493)
T ss_pred HHHHHHHHH-------HHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeecc
Confidence 999998776 6799999999999999999999999999999985 89999999988888887776433332211
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHH
Q 007665 180 NDAKSMILLIAWLPALVSLVFVYTIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCI 259 (594)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (594)
. ...||+.|+...++++..++..+
T Consensus 183 ~-------------------------------~~~Wr~af~~~avl~vi~~~L~~------------------------- 206 (493)
T KOG1330|consen 183 L-------------------------------TFWWRWAFRGSAVLGVIVGLLVF------------------------- 206 (493)
T ss_pred C-------------------------------ccceEEEEEeehHHHHHHHHHHH-------------------------
Confidence 1 23488887733333222221111
Q ss_pred hhhhcchhhhhhhhhhhhcCCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCC
Q 007665 260 FVFLPLFIAFREEFAAWQQRKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKR 339 (594)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (594)
++.++ |++. +.++ .|.+. ....+..
T Consensus 207 -------~f~~e-------------P~rg-a~~~---------------~~~~~-------------------~~~~~~t 231 (493)
T KOG1330|consen 207 -------LFVRE-------------PERG-ARDE---------------VDGEN-------------------KMVKPFT 231 (493)
T ss_pred -------hhccC-------------cccc-cccc---------------cccCC-------------------cCCCCcc
Confidence 11111 1100 0000 00000 0001111
Q ss_pred CCCccHHHhhchHHHHHHHHHHHhhccccceeeccHHHHHH----hcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHh
Q 007665 340 GEDYGILQALLSIDMLILFLATFCGLGCSLTAIDNLGQIGE----SLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIIL 415 (594)
Q Consensus 340 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g 415 (594)
...+..+.+.|++.+-...+.+....+..-.+.+|.|.+.+ -.|.+.++...+..+..+++.+|.+++|.++||+.
T Consensus 232 s~~kDl~~l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~ 311 (493)
T KOG1330|consen 232 SVWKDLKVLAKIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLS 311 (493)
T ss_pred chHHHHHHHHccCceeeehHHHHHHHHhccccchhhhhHHHHHHHHhCCccccchhhhhHHHhhchhhheehHHHHHHHH
Confidence 11123344455555433333332222222233445554443 34777777778889999999999999999999987
Q ss_pred hhccC-CchH---HHHHHHHHHHHHHHHHhcc-Cc--chHHHHHHHHHHHhh-hhHHHHHHHHHHhccCCccccccchhh
Q 007665 416 LKYKV-PRPL---IMAISLILSAVGDVLIAFP-KP--GSVYVASLLVGFSYG-AQLTLLFIIISELFGLKYYSTLFNCGQ 487 (594)
Q Consensus 416 ~r~~~-~~~~---~~~~~~~~~~i~~~~~~~~-~~--~~~~~~~~l~G~~~g-~~~~~~~~~~~~~~~~~~~g~~~g~~~ 487 (594)
|+++- .+.. +........++.++.+... .. ....+.++++|.... ..++...-+..++.|+++|.+++.+-.
T Consensus 312 ~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~~~~~il~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~ 391 (493)
T KOG1330|consen 312 RIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTSSSMIFGLILFLVGETISWFNWATNNPIFLEVVPPSRRTTAYALDT 391 (493)
T ss_pred HhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcccccccceeeEecCcccccHHHHHHH
Confidence 65421 1111 1111111222222222211 11 222233344444322 123344456778899999999999987
Q ss_pred ccchhhhhhhhhhHHHhhhhHH
Q 007665 488 LASPLGSYVLNVIVVGRLYDRE 509 (594)
Q Consensus 488 ~~~~lg~~~~gp~~~g~l~~~~ 509 (594)
...-+.+-.-+|++.|.+.|+-
T Consensus 392 ~~~h~fgd~~~p~ivGilsd~l 413 (493)
T KOG1330|consen 392 VFEHIFGDAASPYIVGILSDKL 413 (493)
T ss_pred HHHHHhccCCCcceehhHHHHh
Confidence 7665544443677999998873
No 85
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.88 E-value=3.9e-20 Score=193.34 Aligned_cols=362 Identities=11% Similarity=0.005 Sum_probs=217.1
Q ss_pred Hhhhhhhch-hhhHHHHHHHhCCCHhHHHHHHHHHhhhhhhhhhhhhhhccc-----CchH-HHHHHHHHHHHHHHHHHH
Q 007665 36 AGAGATYLF-GTYSKEIKSTLGYDQTTLNLLSTCKDLGANVGVLSGLLAEVT-----PPWL-VLLVGSAMNFGGYFMIWL 108 (594)
Q Consensus 36 ~~~g~~~~~-~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-----G~r~-v~~~g~~l~~ig~~l~~~ 108 (594)
+..|..+.+ ....|.+-++.|+|.++++++...... .++.+++|+++||+ |||| .+.++.++.+++..++++
T Consensus 9 ~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~-~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~ 87 (402)
T PRK11902 9 FASGLPLALTSGTLQAWMTVEGLDIQTIGFFSLVGQA-YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAF 87 (402)
T ss_pred HHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH-HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHh
Confidence 344443333 345577777889999999997666554 47799999999999 8876 677777777766665533
Q ss_pred HHhhccCChhHHHHHHHHHHHhhhhhhhhhhhHhHHhhcCCC-ceeehhHHHHHhhhhHHHHHHHHHHHHhCCChHHHHH
Q 007665 109 AVMKKIAKPKVWQMCLYICIGANSQNFANTGSLVTCVKNFPE-SRGMMLGLMKGFVGLSGAVFTQIYLAIYGNDAKSMIL 187 (594)
Q Consensus 109 a~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp~-~rg~~~gi~~~~~glg~~i~~~l~~~l~~~~~~~~~~ 187 (594)
. . ...+++.+++..++.++..+...+...+++.|++|+ +|+++.++...+.++|..+++.+...+.+.
T Consensus 88 ~--~--~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~------- 156 (402)
T PRK11902 88 C--P--PHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADR------- 156 (402)
T ss_pred c--C--ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhc-------
Confidence 2 1 113567777777778888888888888999999985 699999999999889988887665443321
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHHhhhhcchh
Q 007665 188 LIAWLPALVSLVFVYTIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCIFVFLPLFI 267 (594)
Q Consensus 188 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (594)
..+||..|.....+.+ +..+ . ..
T Consensus 157 ------------------------~~gw~~~f~i~a~~~l---~~~l-----------------------------~-~~ 179 (402)
T PRK11902 157 ------------------------VLGWGNTYLLMAGLML---AGAL-----------------------------T-TL 179 (402)
T ss_pred ------------------------ccCHHHHHHHHHHHHH---HHHH-----------------------------H-HH
Confidence 1266666652211100 0000 0 00
Q ss_pred hhhhhhhhhhcCCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCCCCCccHHH
Q 007665 268 AFREEFAAWQQRKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKRGEDYGILQ 347 (594)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (594)
..+++ +. +++ + .++.+......+++
T Consensus 180 ~~~e~-~~---------~~~-----~----------------------------------------~~~~~~~~~~~~~~ 204 (402)
T PRK11902 180 WAPEP-EV---------PAR-----P----------------------------------------PRSLGEAVVGPLRD 204 (402)
T ss_pred hcCCC-cc---------ccc-----c----------------------------------------cchhHHHHHHHHHH
Confidence 01100 00 000 0 00000001124567
Q ss_pred hhchHHHHHHHHHHHhhccccceee-ccHHHHHHhcCCCCCcchhhHHHHh-hhhhHhhhhhccccHHHhhhccCCchHH
Q 007665 348 ALLSIDMLILFLATFCGLGCSLTAI-DNLGQIGESLGYPQHTINTFVSLVS-IWNYFGRVFAGFVSEIILLKYKVPRPLI 425 (594)
Q Consensus 348 ~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~s~~~a~~~~~~~~-i~~~~g~~~~g~l~dr~g~r~~~~~~~~ 425 (594)
.+|+|.+|.+.+..++......... ...+.+.++.|+++.+.+......+ ++..+|.+++|++.||+++|+ .
T Consensus 205 l~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~------~ 278 (402)
T PRK11902 205 FFSRRGAWALLLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYR------S 278 (402)
T ss_pred HHhCcCHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHH------H
Confidence 8899988876655444322211111 2233444568999888888876655 468999999999999998773 2
Q ss_pred HHHHHHHHHHH---HHHHhcc-Cc-chHHHHHHH----HHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhh
Q 007665 426 MAISLILSAVG---DVLIAFP-KP-GSVYVASLL----VGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYV 496 (594)
Q Consensus 426 ~~~~~~~~~i~---~~~~~~~-~~-~~~~~~~~l----~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~ 496 (594)
+..+..+..+. +..+... +. +.++...++ .|++.+...+....++.+.+| ++.++..+....++..+
T Consensus 279 l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~~ 354 (402)
T PRK11902 279 LMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFS----ATQYALLSALASVGRVY 354 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCc----HHHHHHHHHHHHHHHHH
Confidence 23333322222 2222222 22 333333333 334444444445555555554 44556666666777765
Q ss_pred hhhhHHHhhhhHHHHHhhhhhhcccccCCCcccccccchHHHHHHHHHHHHHHHHHHHHH
Q 007665 497 LNVIVVGRLYDREAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFIL 556 (594)
Q Consensus 497 ~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 556 (594)
++.+.|.++|. .+|+..|.+.+++++++.++....
T Consensus 355 -~~~~~G~l~~~------------------------~G~~~~f~~~~~~~~~~~~~~~~~ 389 (402)
T PRK11902 355 -VGPTSGYLVEA------------------------YGWPGFYLMTVVIALPGLALLWLM 389 (402)
T ss_pred -HHHHHHHHHHH------------------------hChHHHHHHHHHHHHHHHHHHHHH
Confidence 34589999998 679999999888887776655333
No 86
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.88 E-value=3.2e-21 Score=198.28 Aligned_cols=327 Identities=11% Similarity=0.019 Sum_probs=206.2
Q ss_pred chhhhHHHHHHHhCCCHhHHHHHHHHHhhhhhhhhhhhhhhccc-----CchHHH-HHHHHHHHHHHHHHHHHHhhccCC
Q 007665 43 LFGTYSKEIKSTLGYDQTTLNLLSTCKDLGANVGVLSGLLAEVT-----PPWLVL-LVGSAMNFGGYFMIWLAVMKKIAK 116 (594)
Q Consensus 43 ~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-----G~r~v~-~~g~~l~~ig~~l~~~a~~~~~~~ 116 (594)
..+...|.+.+|+|+|.+++++.+....... ..+++|+++||+ ||||.+ +.+.++.++.....++. .+.
T Consensus 6 ~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~-~~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~----~~~ 80 (356)
T TIGR00901 6 LVGNTLPYWLRSKNVSLKTIGFFSLVGLPYS-LKFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFL----VPS 80 (356)
T ss_pred hHHhHHHHHHHHcCCCHHHHHHHHHHHHHHH-HHHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcC----Ccc
Confidence 3456778899999999999999765544443 389999999998 899975 55666655554443221 111
Q ss_pred hhHHHHHHHHHHHhhhhhhhhhhhHhHHhhcCC-CceeehhHHHHHhhhhHHHHHHHHHHHHhCCChHHHHHHHHHHHHH
Q 007665 117 PKVWQMCLYICIGANSQNFANTGSLVTCVKNFP-ESRGMMLGLMKGFVGLSGAVFTQIYLAIYGNDAKSMILLIAWLPAL 195 (594)
Q Consensus 117 ~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp-~~rg~~~gi~~~~~glg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~ 195 (594)
.+++.+....++.+++.+...++..+++.|++| ++|+++.|+...+..+|.++++.+...+.+..+
T Consensus 81 ~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g------------- 147 (356)
T TIGR00901 81 TDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEF------------- 147 (356)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcc-------------
Confidence 345666677778888888888888889999997 679999999999999998888766654432211
Q ss_pred HHHHHHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHHhhhhcchhhhhhhhhh
Q 007665 196 VSLVFVYTIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCIFVFLPLFIAFREEFAA 275 (594)
Q Consensus 196 ~~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (594)
.++....+||..|.......+ +. ..+.+...+|++.
T Consensus 148 -----------~~~~~~~~wr~~f~i~ai~~l---~~------------------------------~~~~~~~~~e~~~ 183 (356)
T TIGR00901 148 -----------ANTGLITLWGYIFFWTALLIL---PG------------------------------LLVTLFLAKEPQE 183 (356)
T ss_pred -----------cccccccccHHHHHHHHHHHH---HH------------------------------HHHHHHhccCCCc
Confidence 000012347776652111100 00 0000111111000
Q ss_pred hhcCCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCCCCCccHHHhhchHH--
Q 007665 276 WQQRKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKRGEDYGILQALLSID-- 353 (594)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-- 353 (594)
+++ + .++++.......++.++++.
T Consensus 184 --------~~~------~----------------------------------------~~~~~~~~~~~~~~~~~~~~~~ 209 (356)
T TIGR00901 184 --------DAS------V----------------------------------------PKPLTQAVLKPIREFFQRKNMI 209 (356)
T ss_pred --------ccc------c----------------------------------------chhHHHHHHHHHHHHHHhcCch
Confidence 000 0 00000000113355666664
Q ss_pred -HHHHHHHHHhhccccceeeccHHHHHHhcCCCCCcchhhHHHHh-hhhhHhhhhhccccHHHhhhccCCchHHHHHHHH
Q 007665 354 -MLILFLATFCGLGCSLTAIDNLGQIGESLGYPQHTINTFVSLVS-IWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLI 431 (594)
Q Consensus 354 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~-i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 431 (594)
++.+.+..++..........+.|++.+++|+++.+.+....+.+ +...+|.+++|++.||+++|+ .+..+.+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~------~l~~~~~ 283 (356)
T TIGR00901 210 QALLLLLLIVLYKLGDSAATVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILY------ALLLFGI 283 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHH------HHHHHHH
Confidence 66555555544444445566788888889999988888877665 678899999999999999874 2334444
Q ss_pred HHHHHHHHHhc-c----------C-cchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccch
Q 007665 432 LSAVGDVLIAF-P----------K-PGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASP 491 (594)
Q Consensus 432 ~~~i~~~~~~~-~----------~-~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ 491 (594)
+.+++..++.. . + .+.+....++.+++.+...+...+++.+.+|++++|+.+|+.+...+
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 284 VQALTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 44443332221 1 1 12344455677899999999999999999999999999998876543
No 87
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.88 E-value=6.4e-21 Score=205.12 Aligned_cols=388 Identities=16% Similarity=0.102 Sum_probs=247.9
Q ss_pred hHHHHHHHHHhhhh-hhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHhhhhhhhhh
Q 007665 60 TTLNLLSTCKDLGA-NVGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIAKPKVWQMCLYICIGANSQNFANT 138 (594)
Q Consensus 60 ~~~~~~~~~~~~~~-~~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~~~~~~l~~~r~l~G~g~g~~~~ 138 (594)
.+.+|+.+...+++ +.+++.|+++|++|||+.++++.+++.+|+++++++ +++.+++++|+++|+|.|....
T Consensus 89 ~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a-------~~~~~l~~GR~l~G~g~G~~~~ 161 (513)
T KOG0254|consen 89 VRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALA-------PSWYQLIVGRILTGLGVGGASV 161 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh-------hhHHHHHHHHHHhccchhhhhh
Confidence 35588877777777 558899999999999999999999999999999887 7899999999999999999999
Q ss_pred hhHhHHhhcCCC-ceeehhHHHHHhhhhHHHHHHHHHHHHhCCC--hHHHHHHHHHHHHHHHHHHHHHhccCCCC--CCC
Q 007665 139 GSLVTCVKNFPE-SRGMMLGLMKGFVGLSGAVFTQIYLAIYGND--AKSMILLIAWLPALVSLVFVYTIRPLKVS--SHP 213 (594)
Q Consensus 139 ~~~~~i~~~fp~-~rg~~~gi~~~~~glg~~i~~~l~~~l~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~ 213 (594)
....+++|.-|+ .||...++......+|..++ .+.+...++. .|+..+.++..|++...++++++.+.|.. +..
T Consensus 162 ~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g 240 (513)
T KOG0254|consen 162 LAPVYISEIAPAHIRGTLVSLYQLFITIGILLG-YCINYGTSKVYAGWRIPLGLALIPAVILALGMLFLPESPRWLIEKG 240 (513)
T ss_pred cchhhHhhcCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhhccCCccHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHcC
Confidence 999999999985 79999999988887666555 5555555543 67777777777777666663333211100 000
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHHhhhhcchhhhhhhhhhhhcCCCCCCCcccccccc
Q 007665 214 NELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCIFVFLPLFIAFREEFAAWQQRKQPTPASAVVIVFE 293 (594)
Q Consensus 214 ~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (594)
....... . . ..++ .. .+. +
T Consensus 241 ~~~~a~~--------~--l----------------------------------~~l~-------g~----~~~------~ 259 (513)
T KOG0254|consen 241 RLEEAKR--------S--L----------------------------------KRLR-------GL----SPE------D 259 (513)
T ss_pred ChHHHHH--------H--H----------------------------------HHHh-------CC----CCc------c
Confidence 0000000 0 0 0000 00 000 0
Q ss_pred cchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCCCCCccHH----HhhchHHHHHHHHHHHhhccccc
Q 007665 294 QTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKRGEDYGIL----QALLSIDMLILFLATFCGLGCSL 369 (594)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~l~~~~~~~~~~~~~~~~~~~~ 369 (594)
. +.+..+.+.+ . ..+ ....+. +..+. ...+++.++...+..+.+.....
T Consensus 260 --~----~~~~~~~~~~---~---~~~------------~~~~~~---~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~ 312 (513)
T KOG0254|consen 260 --V----EVELELLKIK---L---LVE------------AEVAEG---KASWGELFSPKVRKRLIIGLLLQLFQQLTGIN 312 (513)
T ss_pred --h----HHHHHHHHHH---H---HHh------------hhcccc---cccHHHhcCcchHHHHHHHHHHHHHHHHhCCc
Confidence 0 0000000000 0 000 000000 00111 22334555556666666666667
Q ss_pred eeeccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhcc-----C
Q 007665 370 TAIDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAFP-----K 444 (594)
Q Consensus 370 ~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~~-----~ 444 (594)
...++.+++++..|.+... .....+.++.+.++.+++.++.||+||| .++..+...+.++.+++... .
T Consensus 313 ~~~~Y~~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr------~lll~s~~~m~~~~~~~~~~~~~~~~ 385 (513)
T KOG0254|consen 313 YVFYYSTTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRR------KLLLFGAAGMSICLVILAVVGVFALY 385 (513)
T ss_pred eEEeehHHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccH------HHHHHhHHHHHHHHHHHHHHHHHhcc
Confidence 7888889999999887554 5556778888888888999999999988 46677777777766655421 0
Q ss_pred --------cchHHHHHHHHHHHhhhhHHHHH-HHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhh
Q 007665 445 --------PGSVYVASLLVGFSYGAQLTLLF-IIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLA 515 (594)
Q Consensus 445 --------~~~~~~~~~l~G~~~g~~~~~~~-~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~ 515 (594)
.+...+..+++-.++...+...+ .+.+|.||.+.|+++.++....+++.++++ ...+-.+.+.
T Consensus 386 ~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v-~~~~~~~~~~------- 457 (513)
T KOG0254|consen 386 YPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLI-SFFFPFITEA------- 457 (513)
T ss_pred CCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHH-HHHHHHHHHh-------
Confidence 11122222333333333344444 578999999999999999999998888653 2222222222
Q ss_pred hhhcccccCCCcccccccchHHHHHHHHHHHHHHHH-HHHHHHhhhhhccchhHHHHhHHH
Q 007665 516 EKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGAL-ITFILVMRTRRYYSGDIYKKFKEQ 575 (594)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 575 (594)
.+....|....+++.+..+ ..++..+|+|+++.++.++...+.
T Consensus 458 -----------------~~~~~~f~~f~~~~~~~~~~fv~~~~pETkg~sleei~~~~~~~ 501 (513)
T KOG0254|consen 458 -----------------LGIGGTFGYFGGICLLSLIIFVFFFVPETKGLTLEEINELFEEG 501 (513)
T ss_pred -----------------ccccchHHHHHHHHHHHHHHHheEEcccCCCCcHHHHHHHHHcC
Confidence 1135667777777777777 777888999999887777766544
No 88
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.86 E-value=1.2e-18 Score=186.37 Aligned_cols=146 Identities=8% Similarity=0.027 Sum_probs=112.7
Q ss_pred hhHHHHHHHhCCCHhHHHHHHHHHhhhh-hhhhhhhhhhcc-cCchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHH
Q 007665 46 TYSKEIKSTLGYDQTTLNLLSTCKDLGA-NVGVLSGLLAEV-TPPWLVLLVGSAMNFGGYFMIWLAVMKKIAKPKVWQMC 123 (594)
Q Consensus 46 ~~~~~l~~~~~~s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr-~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~~~~~~l~ 123 (594)
.....+++++|++.++.+++...+.... ...+++|+++|| +|||++++++.+++.+++.+++++ . ++...+.
T Consensus 43 ~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~-----~-~~~~~l~ 116 (500)
T PRK09584 43 IMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWS-----G-HDAGIVY 116 (500)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHh-----c-ccHHHHH
Confidence 3445567899999999888544444333 445799999999 599999999999999997776543 1 2345566
Q ss_pred HHHHHHhhhhhhhhhhhHhHHhhcCCC-c--eeehhHHHHHhhhhHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHH
Q 007665 124 LYICIGANSQNFANTGSLVTCVKNFPE-S--RGMMLGLMKGFVGLSGAVFTQIYLAIYGNDAKSMILLIAWLPALVS 197 (594)
Q Consensus 124 ~~r~l~G~g~g~~~~~~~~~i~~~fp~-~--rg~~~gi~~~~~glg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 197 (594)
+.|+++|+|.|...+....++.++||+ + |+.+.++...+..+|+.+++.+.+.+.+..+|++.++++.+.....
T Consensus 117 ~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~ 193 (500)
T PRK09584 117 MGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLIT 193 (500)
T ss_pred HHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHH
Confidence 788999999998888888899999974 2 4567888888889999999999999888777888777776544443
No 89
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.86 E-value=8.3e-19 Score=186.40 Aligned_cols=406 Identities=12% Similarity=0.039 Sum_probs=225.9
Q ss_pred HHHHHH--hCCCHhHHHHHHHHHh-hhhhhhhhhhhhhcc-cCchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHH
Q 007665 49 KEIKST--LGYDQTTLNLLSTCKD-LGANVGVLSGLLAEV-TPPWLVLLVGSAMNFGGYFMIWLAVMKKIAKPKVWQMCL 124 (594)
Q Consensus 49 ~~l~~~--~~~s~~~~~~~~~~~~-~~~~~~~~~G~l~Dr-~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~~~~~~l~~ 124 (594)
..++++ +|++..+.+++...+. ...+..+++|+++|| +|||++++++.++.+++.++.+++ +++..+++
T Consensus 35 ~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~-------~~~~~~~~ 107 (475)
T TIGR00924 35 VYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMS-------IYPDLIFY 107 (475)
T ss_pred HHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhc-------ccHhHHHH
Confidence 344565 9999999999555544 444668899999999 899999999999999998776543 45677788
Q ss_pred HHHHHhhhhhhhhhhhHhHHhhcCCC----ceeehhHHHHHhhhhHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHH
Q 007665 125 YICIGANSQNFANTGSLVTCVKNFPE----SRGMMLGLMKGFVGLSGAVFTQIYLAIYGNDAKSMILLIAWLPALVSLVF 200 (594)
Q Consensus 125 ~r~l~G~g~g~~~~~~~~~i~~~fp~----~rg~~~gi~~~~~glg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~l~~ 200 (594)
.+++.|+|.|...+.....+.+++|+ +|+++.++...+..+|..+++.+.+.+.+..+|++.+.+........++.
T Consensus 108 ~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~ 187 (475)
T TIGR00924 108 GLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLT 187 (475)
T ss_pred HHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHH
Confidence 99999999999888888899999963 38889999999999999999888777665444444333332221111111
Q ss_pred HHHhccCCC----CCC-Cchh-HHH-HHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHHhhhhcchhhhhhhh
Q 007665 201 VYTIRPLKV----SSH-PNEL-KVF-YEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCIFVFLPLFIAFREEF 273 (594)
Q Consensus 201 ~~~~~~~~~----~~~-~~~~-~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (594)
..+.+...+ .+. .+.+ ... .....+ ...+.. ..
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~----------------------------------~~---- 227 (475)
T TIGR00924 188 FFAGRHMLRDIGSVPDPLSGQGKTYGKLLLAL--LAALAL----------------------------------VF---- 227 (475)
T ss_pred HHHcccccccCCCCCCCcchhhhhhHHHHHHH--HHHHHH----------------------------------HH----
Confidence 111110000 000 0000 000 000000 000000 00
Q ss_pred hhhhcCCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCCCCCccHHHhhchHH
Q 007665 274 AAWQQRKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKRGEDYGILQALLSID 353 (594)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 353 (594)
.......+.+. .+. ......-..-.. ......+++ .+..+..|...
T Consensus 228 ---------------------------~~~~~~~~~~~-~~~-~~~~~~~~~~~~-~~~~~~~~~----~~~~~~~~~~~ 273 (475)
T TIGR00924 228 ---------------------------FCAWLMHHVVI-ANI-LLMTVTLAVIIF-FFRLAFKPR----LDAVARNKMYA 273 (475)
T ss_pred ---------------------------HHHHHHhccHH-HHH-HHHHHHHHHHHH-HHHHHHhcc----CCHHHHhHHHH
Confidence 00000000000 000 000000000000 000000000 00011112223
Q ss_pred HHHHHHHHHhhccccceeeccHHHHHHh-cCCCCCc----chhhHHHHhhhhhHhhhhhccccHHHhhhccCCch-HHHH
Q 007665 354 MLILFLATFCGLGCSLTAIDNLGQIGES-LGYPQHT----INTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRP-LIMA 427 (594)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~----a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~-~~~~ 427 (594)
+..+++...+.+..+....+.++.+.++ .+.+... .+.+.++..+.-++..++..++-.|..||.+..+. .-+.
T Consensus 274 ~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~ 353 (475)
T TIGR00924 274 YIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFT 353 (475)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHH
Confidence 3333333333333322333334444443 2222111 44566666666666655554444556654221111 1236
Q ss_pred HHHHHHHHHHHHHhc----------cCcchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhh
Q 007665 428 ISLILSAVGDVLIAF----------PKPGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVL 497 (594)
Q Consensus 428 ~~~~~~~i~~~~~~~----------~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~ 497 (594)
++.++..+++..+.. .+.+++....++.++|.....+...+++.+..|++.+|+.+|+..+...+|..+
T Consensus 354 ~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l- 432 (475)
T TIGR00924 354 LGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLL- 432 (475)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH-
Confidence 677777777665542 234566777899999999999999999999999999999999999999998876
Q ss_pred hhhHHHhhhhHHHHHhhhhhhcccccCCCcccccccchHHHHHHHHHHHHHHHHHHHHHHhhh
Q 007665 498 NVIVVGRLYDREAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFILVMRT 560 (594)
Q Consensus 498 gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 560 (594)
++.+.....+. .++...|...++++++..++.+++.++.
T Consensus 433 ~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (475)
T TIGR00924 433 GGYLATFGAVP------------------------QGVTGVFGKIGLVTLLVGVVMALMVPWL 471 (475)
T ss_pred HHHHHHHHhcc------------------------cchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77666655544 4577777777777776666665555443
No 90
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.86 E-value=7.1e-20 Score=193.80 Aligned_cols=342 Identities=13% Similarity=0.065 Sum_probs=209.4
Q ss_pred hhHHHHHHHhCCCHhHHHHHHHHH-hhhhhhhhhhhhhhcc----cCchH-HHHHHHHHHHHHHHHHHHHHhhccCChhH
Q 007665 46 TYSKEIKSTLGYDQTTLNLLSTCK-DLGANVGVLSGLLAEV----TPPWL-VLLVGSAMNFGGYFMIWLAVMKKIAKPKV 119 (594)
Q Consensus 46 ~~~~~l~~~~~~s~~~~~~~~~~~-~~~~~~~~~~G~l~Dr----~G~r~-v~~~g~~l~~ig~~l~~~a~~~~~~~~~~ 119 (594)
.+.+.+.+++|++..+++++.+.. ....+..|+.|.++|| +|||| .++.+.+++.++.++++.... .......
T Consensus 21 ~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~-~~~~~~~ 99 (437)
T TIGR00792 21 YLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPD-FSATGKL 99 (437)
T ss_pred HHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCC-CCcchHH
Confidence 456677889999999999955554 4555779999999998 67754 566777787777666643211 0011124
Q ss_pred HHHHHHHHHHhhhhhhhhhhhHhHHhhcC-C-CceeehhHHHHHhhhhHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHH
Q 007665 120 WQMCLYICIGANSQNFANTGSLVTCVKNF-P-ESRGMMLGLMKGFVGLSGAVFTQIYLAIYGNDAKSMILLIAWLPALVS 197 (594)
Q Consensus 120 ~~l~~~r~l~G~g~g~~~~~~~~~i~~~f-p-~~rg~~~gi~~~~~glg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 197 (594)
..+++.+++.+++.+....+..+...+.. + ++|++..++...+..+|+.+.+.+...+ ...
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l-----------------~~~ 162 (437)
T TIGR00792 100 VYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPL-----------------VSY 162 (437)
T ss_pred HHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------HHH
Confidence 55566788888888877666667777766 3 5799999987777667766655333211 100
Q ss_pred HHHHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHHhhhhcchhhhhhhhhhhh
Q 007665 198 LVFVYTIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCIFVFLPLFIAFREEFAAWQ 277 (594)
Q Consensus 198 l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (594)
+ . ......+|+..+.....+++ +..+ ......+|++
T Consensus 163 -----~-~--~~~~~~g~~~~~~i~~~l~~---~~~~-----------------------------~~~~~~~e~~---- 198 (437)
T TIGR00792 163 -----F-G--GGDDKFGWFMFALVLALIGV---VSLI-----------------------------ICFFGTKERY---- 198 (437)
T ss_pred -----h-C--CCcccccHHHHHHHHHHHHH---HHHH-----------------------------HHHcCCEecC----
Confidence 0 0 00113467666542221111 0000 0001111100
Q ss_pred cCCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCCCCCccHHHhhchHHHHHH
Q 007665 278 QRKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKRGEDYGILQALLSIDMLIL 357 (594)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 357 (594)
++. + + .++++.......++.+++|.++.+
T Consensus 199 ------~~~------~------------------------~---------------~~~~~~~~~~~~~~l~~~~~~~~~ 227 (437)
T TIGR00792 199 ------SEI------P------------------------K---------------NIEKKLSLKQIFKALFKNDQLLIL 227 (437)
T ss_pred ------CCC------C------------------------c---------------ccccCCCHHHHHHHHhCCHHHHHH
Confidence 000 0 0 000000011245677889998887
Q ss_pred HHHHHhhccccceeeccHHHHHHh-cCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHH
Q 007665 358 FLATFCGLGCSLTAIDNLGQIGES-LGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVG 436 (594)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~ 436 (594)
.+..++............+++.+. .+ ++.+.+.+..+..++.+++.+++++++||+++|+ .+..+.++.+++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~------~~~~~~~~~~~~ 300 (437)
T TIGR00792 228 CLAYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKI------LFAGGILLMVLG 300 (437)
T ss_pred HHHHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHH------HHHHHHHHHHHH
Confidence 666555443333322233444443 24 4455666777789999999999999999998773 445555555555
Q ss_pred HHHHhcc-C-cchHHHHHHHHHHHhhhhHHHHHHHHHHhcc-------CCccccccchhhccchhhhhhhhhhHHHhhhh
Q 007665 437 DVLIAFP-K-PGSVYVASLLVGFSYGAQLTLLFIIISELFG-------LKYYSTLFNCGQLASPLGSYVLNVIVVGRLYD 507 (594)
Q Consensus 437 ~~~~~~~-~-~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~-------~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~ 507 (594)
.+.+... + .+...+..++.|++.+...+...++++|..+ +++.|..+|+.+....++..+ ++.+.|.+.|
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~l-g~~i~g~ll~ 379 (437)
T TIGR00792 301 YLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQAL-AGFLVGLILG 379 (437)
T ss_pred HHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 5544432 2 2344555677888888888888888888764 567899999999999999976 8999999987
Q ss_pred H
Q 007665 508 R 508 (594)
Q Consensus 508 ~ 508 (594)
.
T Consensus 380 ~ 380 (437)
T TIGR00792 380 I 380 (437)
T ss_pred H
Confidence 6
No 91
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.86 E-value=1.5e-20 Score=182.40 Aligned_cols=343 Identities=18% Similarity=0.193 Sum_probs=230.1
Q ss_pred HHhCCCHhHHHHHHHHHhhh-hhhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHhh
Q 007665 53 STLGYDQTTLNLLSTCKDLG-ANVGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIAKPKVWQMCLYICIGAN 131 (594)
Q Consensus 53 ~~~~~s~~~~~~~~~~~~~~-~~~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~~~~~~l~~~r~l~G~ 131 (594)
++++-.++++|++.....+. .++.|+.|.+.||+|+|-.+++|+.++...++++++. .+++++++.|.+||+
T Consensus 99 ~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg-------~sy~~l~vAR~LQgv 171 (464)
T KOG3764|consen 99 ISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFG-------NSYPMLFVARSLQGV 171 (464)
T ss_pred cCccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHc-------chhHHHHHHHHHhhh
Confidence 45666778899955444444 4669999999999999999999999999999998776 789999999999999
Q ss_pred hhhhhhhhhHhHHhhcCCC--ceeehhHHHHHhhhhHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHhccCCC
Q 007665 132 SQNFANTGSLVTCVKNFPE--SRGMMLGLMKGFVGLSGAVFTQIYLAIYGNDAKSMILLIAWLPALVSLVFVYTIRPLKV 209 (594)
Q Consensus 132 g~g~~~~~~~~~i~~~fp~--~rg~~~gi~~~~~glg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 209 (594)
|.++..++..++++|.||+ +|++++|+..++.++|-.++|+.++.+.+-.
T Consensus 172 gsA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~---------------------------- 223 (464)
T KOG3764|consen 172 GSAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFA---------------------------- 223 (464)
T ss_pred hHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhc----------------------------
Confidence 9999999999999999985 4899999999999999999998888766533
Q ss_pred CCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHHhhhhcchhhhhhhhhhhhcCCCCCCCcccc
Q 007665 210 SSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCIFVFLPLFIAFREEFAAWQQRKQPTPASAVV 289 (594)
Q Consensus 210 ~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (594)
+.+.+|.....+. + .-. ++.+...+ +.+
T Consensus 224 ----Gk~aPFlVL~~v~------L-ld~--------------------------~L~l~vi~-------------p~~-- 251 (464)
T KOG3764|consen 224 ----GKSAPFLVLAIVL------L-LDG--------------------------ALQLLVIE-------------PTE-- 251 (464)
T ss_pred ----CCcCcHHHHHHHH------H-HHH--------------------------HHHHheeC-------------ccc--
Confidence 3333443111110 0 000 00000000 000
Q ss_pred cccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCCCCCccHHHhhchHHHHHHHHH-HHhhcccc
Q 007665 290 IVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKRGEDYGILQALLSIDMLILFLA-TFCGLGCS 368 (594)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~ 368 (594)
.++....+...+++++++|..+..... .+++++.
T Consensus 252 --------------------------------------------~~~~~~~~~~~~~~Ll~dP~I~~~agai~~~n~~l- 286 (464)
T KOG3764|consen 252 --------------------------------------------MDPDSTEQGTPMWSLLMDPYILLIAGAITFSNSSL- 286 (464)
T ss_pred --------------------------------------------cCccccccCccHHHHHhCchHhhhhcchhhccchH-
Confidence 000001112456899999998876654 3333322
Q ss_pred ceeeccHHHHH-HhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHH--hccCc
Q 007665 369 LTAIDNLGQIG-ESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLI--AFPKP 445 (594)
Q Consensus 369 ~~~~~~~~~~~-~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~--~~~~~ 445 (594)
-.+--.++.+. ++..-+..+.++.+...++...+|..+.|.+.||++..+ |++....++ .++.... ...+.
T Consensus 287 afLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~-----wl~~~~gl~-~~G~~~~~iP~~~~ 360 (464)
T KOG3764|consen 287 AFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLR-----WLLSLGGLA-TVGVSSGPIPFATS 360 (464)
T ss_pred HHhCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhcCchh-----HHHHHHHHH-HHHHHhchhHhhhh
Confidence 22233344433 455644558888899999999999999999999997431 443333322 2222222 22222
Q ss_pred -chHHHHHHHHHHHhhhhHHHHHHHHHHhccC---C---ccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhh
Q 007665 446 -GSVYVASLLVGFSYGAQLTLLFIIISELFGL---K---YYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKG 518 (594)
Q Consensus 446 -~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~---~---~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~ 518 (594)
..+++..+..+++.+..-+........+... + .+|..+++......+|-++ ||.+.|.+++.
T Consensus 361 ~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~-GP~~gg~iv~~---------- 429 (464)
T KOG3764|consen 361 IAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAI-GPTFGGSLVEA---------- 429 (464)
T ss_pred HHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhc-cccccchheee----------
Confidence 2344444445555444443333333333332 2 5678888889999999876 99999999888
Q ss_pred cccccCCCcccccccchHHHHHHHHHHHHHHHHHHHHHHh
Q 007665 519 MTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFILVM 558 (594)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 558 (594)
.++++...+.++.+++-..+..+++.
T Consensus 430 --------------iGF~wl~~iig~~n~iyapvl~ll~~ 455 (464)
T KOG3764|consen 430 --------------IGFEWLMTIIGILNLIYAPVLLLLRI 455 (464)
T ss_pred --------------hhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78999999999998888877766654
No 92
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.86 E-value=3.7e-20 Score=177.22 Aligned_cols=422 Identities=12% Similarity=0.066 Sum_probs=254.1
Q ss_pred HhhhHHHHHHHHHHHHhh-hhhhchhhhHHHHHHHhCCCHhHHHHHHHHHhhhhhh-hhhhhhhhcccCchHHHHHHHHH
Q 007665 21 LRGRWFMMFASFLIMAGA-GATYLFGTYSKEIKSTLGYDQTTLNLLSTCKDLGANV-GVLSGLLAEVTPPWLVLLVGSAM 98 (594)
Q Consensus 21 ~~~~w~~~~~~~l~~~~~-g~~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~v~~~g~~l 98 (594)
.+.+|.....+....+.. +-....+.+.|.+.+.++.+..+.++++.....+... +..+|.++|++|||+.+.+..+.
T Consensus 73 grfq~yl~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~ 152 (528)
T KOG0253|consen 73 GRFQWYLFFVAGMGWMADAMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLV 152 (528)
T ss_pred ccchhhHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHH
Confidence 445676655444443333 3455667788999999999999999999888888865 67999999999999999886666
Q ss_pred HHHHHHHHHHHHhhccCChhHHHHHHHHHHHhhhhhhhhhhhHhHHhhcCCC-ceeehhHHHHHhhhhHHHHHHHHHHHH
Q 007665 99 NFGGYFMIWLAVMKKIAKPKVWQMCLYICIGANSQNFANTGSLVTCVKNFPE-SRGMMLGLMKGFVGLSGAVFTQIYLAI 177 (594)
Q Consensus 99 ~~ig~~l~~~a~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp~-~rg~~~gi~~~~~glg~~i~~~l~~~l 177 (594)
.++...+.+. ++|+..++++|.+.|+|.|. +|...++-.+.-|. +|++.+=+. ..+.+|.+.-..+...+
T Consensus 153 t~v~~~is~~-------spnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~v 223 (528)
T KOG0253|consen 153 TGVFGVISGA-------SPNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGV 223 (528)
T ss_pred HHHHHHhhcC-------CCCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHH
Confidence 5555444322 27899999999999999998 66666665666674 677766555 88889999988888888
Q ss_pred hCCChHHHHHHHHHHHHHHHHHHHHHhccCCCCC-CCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhH
Q 007665 178 YGNDAKSMILLIAWLPALVSLVFVYTIRPLKVSS-HPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIA 256 (594)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (594)
+.+.+|+|+.+....|+.........+.+.|... ..+.+..-. .
T Consensus 224 m~~~gwr~~l~~~~~pl~~~a~f~~w~~ESpRf~~~~G~~~kAl--e--------------------------------- 268 (528)
T KOG0253|consen 224 MSNFGWRYLLFTSSTPLMFAARFLVWVYESPRFYLAKGDDYKAL--E--------------------------------- 268 (528)
T ss_pred HHhhhHHHHHHHHHhHHHHHHHHHhhcccCcchhhhcCChHHHH--H---------------------------------
Confidence 8888888877777677665555433332222110 001100000 0
Q ss_pred HHHhhhhcchhhhhhhhhhhhcCCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCC-CC
Q 007665 257 VCIFVFLPLFIAFREEFAAWQQRKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNI-FK 335 (594)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 335 (594)
..++..+-.. ..-|.........+++++|+ .+.++.+.. .+
T Consensus 269 ------------tL~kiArmNg---~qlplgvl~~s~~~~~e~e~-----------------------~~~~~~~~~a~k 310 (528)
T KOG0253|consen 269 ------------TLHKIARMNG---KQLPLGVLESSAIDRQEQEE-----------------------SDLDDSKSSAAK 310 (528)
T ss_pred ------------HHHHHHHhcC---CCCCcceeeeehhhhhhhhh-----------------------hchhhhhhcccc
Confidence 0000000000 00000000000000000000 000000000 01
Q ss_pred CCCCCCCccHHHh----hc--hHHHHHHHHHHHhhccccceeec-----------------cHHHHHHh-cCCCCCcch-
Q 007665 336 PPKRGEDYGILQA----LL--SIDMLILFLATFCGLGCSLTAID-----------------NLGQIGES-LGYPQHTIN- 390 (594)
Q Consensus 336 ~~~~~~~~~~~~~----l~--~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~-~g~s~~~a~- 390 (594)
+++. ....+ +| +-..|.+++... +.+++.+- ..|+..+. .+-......
T Consensus 311 e~rg----~~~nLlsp~lrkttlllw~iwfgna---fsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~d 383 (528)
T KOG0253|consen 311 EVRG----GTTNLLSPKLRKTTLLLWRIWFGNA---FSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKD 383 (528)
T ss_pred cccc----chHhhcChHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhH
Confidence 1110 11111 11 122233333222 22222111 12233332 111111111
Q ss_pred -hhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhccC-cchHHHHHHHHHHHhhhhHHHHHH
Q 007665 391 -TFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAFPK-PGSVYVASLLVGFSYGAQLTLLFI 468 (594)
Q Consensus 391 -~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~l~G~~~g~~~~~~~~ 468 (594)
.-.-+.......|-++.+++.||+|||. .++.+.+++++..+++.... .....+..+..-++..+.|.+.+.
T Consensus 384 YrdllitslaefPGlLIt~~iverlGRKk------TMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYv 457 (528)
T KOG0253|consen 384 YRDLLITSLAEFPGLLITGVIVERLGRKK------TMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYV 457 (528)
T ss_pred HHHHHHHHHhhCCchhHHHHHHHHhcchh------HHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEE
Confidence 1245667888999999999999999984 67777777777766665443 344444556666788888999999
Q ss_pred HHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhhcccccCCCcccccccchHHHHHHHHHHHHH
Q 007665 469 IISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIF 548 (594)
Q Consensus 469 ~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~ 548 (594)
+..|+||...|+++.|+...+..+|+++ .|++. ...+. +-..+..+.++++++
T Consensus 458 YtPEVyPTavRatgvGtcSsmaRIggI~-~p~iA-~~~e~-------------------------s~sl~i~vy~~~~il 510 (528)
T KOG0253|consen 458 YTPEVYPTAVRATGVGTCSSMARIGGIF-SPVIA-MRAEL-------------------------STSLPIFVYGALFIL 510 (528)
T ss_pred ecCcccchhhhhcchhhhhhHHhhhhhh-hhHHH-HHhcc-------------------------ceeehHHHHHHHHHH
Confidence 9999999999999999999999999965 88665 33333 344556778888899
Q ss_pred HHHHHHHHHhhhhhcc
Q 007665 549 GALITFILVMRTRRYY 564 (594)
Q Consensus 549 ~~~~~~~~~~~~~~~~ 564 (594)
+.++..++..++|.+.
T Consensus 511 agIavcffPiEtkGR~ 526 (528)
T KOG0253|consen 511 AGIAVCFFPIETKGRS 526 (528)
T ss_pred HHHHheeeeeccCCCC
Confidence 9999999998888753
No 93
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.85 E-value=1.1e-20 Score=206.41 Aligned_cols=296 Identities=11% Similarity=0.084 Sum_probs=185.0
Q ss_pred hhchhhhHHHHHHHhCCCHhHHHHHHHHHhhhh-hhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHh--h-----
Q 007665 41 TYLFGTYSKEIKSTLGYDQTTLNLLSTCKDLGA-NVGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVM--K----- 112 (594)
Q Consensus 41 ~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~--~----- 112 (594)
....+...++++++|+++.++.+++.+.+.++. +..++.|++.||+|||+++.+|.+++++|.+++++..- +
T Consensus 49 ~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~ 128 (633)
T TIGR00805 49 NGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYS 128 (633)
T ss_pred HHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCcccc
Confidence 345567789999999999999999777777776 55889999999999999999999999999998865420 0
Q ss_pred -------c-----------c-----------------C--ChhHHHHHHHHHHHhhhhhhhhhhhHhHHhhcCC-Cceee
Q 007665 113 -------K-----------I-----------------A--KPKVWQMCLYICIGANSQNFANTGSLVTCVKNFP-ESRGM 154 (594)
Q Consensus 113 -------~-----------~-----------------~--~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp-~~rg~ 154 (594)
. . . +..+.++++.|+++|+|.+..++....++.|++| ++|++
T Consensus 129 ~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~ 208 (633)
T TIGR00805 129 TTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPL 208 (633)
T ss_pred ccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHH
Confidence 0 0 0 0125567789999999999999999999999997 57999
Q ss_pred hhHHHHHhhhhHHHHHHHHHHHHhCCC-hHHHHHHHHHHHHHHHHHHHHHhccCC-CCCCCchhH--HHHH-HHHHHHHH
Q 007665 155 MLGLMKGFVGLSGAVFTQIYLAIYGND-AKSMILLIAWLPALVSLVFVYTIRPLK-VSSHPNELK--VFYE-YLYITISL 229 (594)
Q Consensus 155 ~~gi~~~~~glg~~i~~~l~~~l~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~--~f~~-~~~~~~~~ 229 (594)
++|++..+..+|..+++.+.+.+.+.+ +|+ .....+ .....++|| .|+. +.+.++..
T Consensus 209 ~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~------------------~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~ 270 (633)
T TIGR00805 209 YIGILESIAVFGPAFGYLLGSFCLQIYVDTG------------------SVNTEDVILTPTDPRWIGAWWIGFLICGGVA 270 (633)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHhcccccc------------------cCCCCCCCCCCCCccHHHHHHHHHHHHHHHH
Confidence 999999999899988876665543211 000 000000 001122332 2331 11211111
Q ss_pred HHHHHHHhhhhcccCCCCccccchhhHHHHhhhhcchhhhhhhhhhhhcCCCCCCCcccccccccchhhhhhhhhhhccc
Q 007665 230 ALCLMGLTIAQKQAHFPHVGYIGSAIAVCIFVFLPLFIAFREEFAAWQQRKQPTPASAVVIVFEQTTLVATKSEILEIES 309 (594)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (594)
.+. .+++.. +.++.+... ++.+.+.. + +
T Consensus 271 ~l~-----------------------------~v~l~~-~p~~lp~~~-~~~~~~~~------~---------------~ 298 (633)
T TIGR00805 271 LLT-----------------------------SIPFFF-FPKALPKEG-KRVNVDVH------E---------------T 298 (633)
T ss_pred HHH-----------------------------HHHHHh-CccccCCcc-cccchhhh------h---------------h
Confidence 110 111111 111100000 00000000 0 0
Q ss_pred ccccccccccCCCCCCCCCcCCCCCCCCCCCCCccHHHhhchHHHHHHHHHHHhhccccceeeccHHHHHHh-cCCCCCc
Q 007665 310 DHSQTLQTENKKQEPDQTPCCGNIFKPPKRGEDYGILQALLSIDMLILFLATFCGLGCSLTAIDNLGQIGES-LGYPQHT 388 (594)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~ 388 (594)
+ ..++. +++.. . .............+++++||.++...+..++.......+..++|.++++ +|+++.+
T Consensus 299 ---~----~~~~~-~~~~~--~-~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~ 367 (633)
T TIGR00805 299 ---E----KLEKS-EDKSR--K-KNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNGYITFLPKYLENQYGISSAE 367 (633)
T ss_pred ---h----ccccc-ccccc--h-hhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHH
Confidence 0 00000 00000 0 0000000011345789999999999888888777777788899999985 6999999
Q ss_pred chhhHHHHhh-hhhHhhhhhccccHHHhhh
Q 007665 389 INTFVSLVSI-WNYFGRVFAGFVSEIILLK 417 (594)
Q Consensus 389 a~~~~~~~~i-~~~~g~~~~g~l~dr~g~r 417 (594)
+++++.+..+ +.++|.+++|+++||++.+
T Consensus 368 ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~ 397 (633)
T TIGR00805 368 ANFLIGVVNLPAAGLGYLIGGFIMKKFKLN 397 (633)
T ss_pred HHHHhhhhhhhHHHHHHhhhhheeeeeccc
Confidence 9999887776 5689999999999999754
No 94
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.85 E-value=1.2e-18 Score=181.44 Aligned_cols=365 Identities=10% Similarity=0.000 Sum_probs=216.5
Q ss_pred HHHHHhhhhhh-chhhhHHHHHHHhCCCHhHHHHHHHH--Hhhhh-hhhhhh-hhhhcccCchHHHHHHHHHHHHHHHHH
Q 007665 32 FLIMAGAGATY-LFGTYSKEIKSTLGYDQTTLNLLSTC--KDLGA-NVGVLS-GLLAEVTPPWLVLLVGSAMNFGGYFMI 106 (594)
Q Consensus 32 ~l~~~~~g~~~-~~~~~~~~l~~~~~~s~~~~~~~~~~--~~~~~-~~~~~~-G~l~Dr~G~r~v~~~g~~l~~ig~~l~ 106 (594)
...++..|..+ ....+.|.+.++.|.|.+++++++.. ..... +.+|+. ++..||+||||..+++..+..... +.
T Consensus 7 ~~ly~~~g~~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~-~~ 85 (390)
T TIGR02718 7 GLLYLSQGIPIGLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSAC-LA 85 (390)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHH-HH
Confidence 34455566553 33467788889999999999996422 23333 558877 447999999999766654322211 11
Q ss_pred HHHHhhccCChhHHHHHHHHHHHhhhhhhhhhhhHhHHhhcCC-CceeehhHHHHHhhhhHHHHHHHHHHHHhCCChHHH
Q 007665 107 WLAVMKKIAKPKVWQMCLYICIGANSQNFANTGSLVTCVKNFP-ESRGMMLGLMKGFVGLSGAVFTQIYLAIYGNDAKSM 185 (594)
Q Consensus 107 ~~a~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp-~~rg~~~gi~~~~~glg~~i~~~l~~~l~~~~~~~~ 185 (594)
.++...... .....++..-++.++..+...+..-.+..++.+ ++++...+....+..+|..+++.+...+.+
T Consensus 86 ~~~~~~~~~-~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~------ 158 (390)
T TIGR02718 86 SLALVGPDV-AGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFG------ 158 (390)
T ss_pred HHHcCCcch-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH------
Confidence 112111111 112222333344445555555555555667775 446777777777777777777654443332
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHHhhhhcc
Q 007665 186 ILLIAWLPALVSLVFVYTIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCIFVFLPL 265 (594)
Q Consensus 186 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (594)
..+|+..|.....+.+.. . ++.
T Consensus 159 --------------------------~~gw~~~f~~~a~l~~~~---~-----------------------------~~~ 180 (390)
T TIGR02718 159 --------------------------KFGQRPAFLLVACVPLAS---L-----------------------------VCV 180 (390)
T ss_pred --------------------------HhCHHHHHHHHHHHHHHH---H-----------------------------HHH
Confidence 236666665221111000 0 000
Q ss_pred hhhhhhhhhhhhcCCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCCCCCccH
Q 007665 266 FIAFREEFAAWQQRKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKRGEDYGI 345 (594)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (594)
+..++++ +++ + ++ +..+....
T Consensus 181 -~~~~~~~-----------~~~-----~----------------------------------------~~--~~~~~~~~ 201 (390)
T TIGR02718 181 -LWLKDRA-----------VAS-----P----------------------------------------EA--PLARRASL 201 (390)
T ss_pred -HHcCCCC-----------cCc-----c----------------------------------------cc--chhhHHHH
Confidence 0111000 000 0 00 00011235
Q ss_pred HHhhchHHHHHHHHHHHhhccccceeeccHHHHHHhcCCCCCcchhhHHHHh-hhhhHhhhhhccccHHHhhhccCCchH
Q 007665 346 LQALLSIDMLILFLATFCGLGCSLTAIDNLGQIGESLGYPQHTINTFVSLVS-IWNYFGRVFAGFVSEIILLKYKVPRPL 424 (594)
Q Consensus 346 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~-i~~~~g~~~~g~l~dr~g~r~~~~~~~ 424 (594)
++.+|+|.+|......++..........+.+.+.++.|+++.+.+....... +...++.++.|++.||+++|+
T Consensus 202 ~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~------ 275 (390)
T TIGR02718 202 FRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWR------ 275 (390)
T ss_pred HHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHH------
Confidence 6788888887766655555444444455667888889999999999888776 466788999999999999874
Q ss_pred HHHHHHHHHHH-HHHHHhcc-----C-cchHHHHHHHHHHHhhhhHHHHHHHHHHhccC-Cccccccchhhccchhhhhh
Q 007665 425 IMAISLILSAV-GDVLIAFP-----K-PGSVYVASLLVGFSYGAQLTLLFIIISELFGL-KYYSTLFNCGQLASPLGSYV 496 (594)
Q Consensus 425 ~~~~~~~~~~i-~~~~~~~~-----~-~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~ 496 (594)
.+..+.++..+ ........ . ....+....+.+++.+..++.......+..++ +++++.+++.+...++|..+
T Consensus 276 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~ 355 (390)
T TIGR02718 276 TFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELI 355 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHH
Confidence 23333333212 11111111 1 11223333455667777777777777777776 88999999999999999976
Q ss_pred hhhhHHHhhhhHHHHHhhhhhhcccccCCCcccccccchHHHHHHHHHHHHHHHHH
Q 007665 497 LNVIVVGRLYDREAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALI 552 (594)
Q Consensus 497 ~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~ 552 (594)
+|.+.|.++|. .+|+..|.+.+++.+++.++
T Consensus 356 -g~~~~G~l~~~------------------------~G~~~~f~~~~~~~l~a~~~ 386 (390)
T TIGR02718 356 -ASSIAGYLTDR------------------------FGYAGGFLSGTVLAVLAILL 386 (390)
T ss_pred -HHHHHHHHHHH------------------------HccHHHHHHHHHHHHHHHHH
Confidence 99999999998 57889998888777666544
No 95
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.84 E-value=1.2e-24 Score=231.34 Aligned_cols=383 Identities=16% Similarity=0.141 Sum_probs=224.7
Q ss_pred HHHHHHHHHhhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhccCCh---hHHHHHHHHHHHhhhhhhh
Q 007665 61 TLNLLSTCKDLGANV-GVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIAKP---KVWQMCLYICIGANSQNFA 136 (594)
Q Consensus 61 ~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~~---~~~~l~~~r~l~G~g~g~~ 136 (594)
+.+++.+...++..+ +++.|.++||+|||++++++.++..++.++.+++ + +++.++++|++.|++.|..
T Consensus 47 ~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~-------~~~~~~~~~~~~R~~~G~~~g~~ 119 (451)
T PF00083_consen 47 LSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFA-------PSYNNFWMLLIGRFLIGFGIGGA 119 (451)
T ss_pred HHHHHHHHHHhhhccccccccccccccccccccccccccccccccccccc-------ccccccccccccccccccccccc
Confidence 456677777777755 7799999999999999999999999999887665 5 7899999999999999999
Q ss_pred hhhhHhHHhhcCC-CceeehhHHHHHhhhhHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCch
Q 007665 137 NTGSLVTCVKNFP-ESRGMMLGLMKGFVGLSGAVFTQIYLAIYGNDAKSMILLIAWLPALVSLVFVYTIRPLKVSSHPNE 215 (594)
Q Consensus 137 ~~~~~~~i~~~fp-~~rg~~~gi~~~~~glg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 215 (594)
++....++.|..| ++||+..++...++.+|..++..+...+..... +..|
T Consensus 120 ~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~-----------------------------~~~W 170 (451)
T PF00083_consen 120 YVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSD-----------------------------NWGW 170 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccc-----------------------------cccc
Confidence 9999999999997 579999999988887887665433322110000 1234
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHHhhhhcchhhhhhhhhhhhcCCCCCCCcccccccccc
Q 007665 216 LKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCIFVFLPLFIAFREEFAAWQQRKQPTPASAVVIVFEQT 295 (594)
Q Consensus 216 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (594)
|..+..-... .+..+. .....+|.++|...+.+.++.+..
T Consensus 171 r~~~~~~~~~---------------------------------~l~~~~-~~~~~pESP~wL~~~~~~~~A~~~------ 210 (451)
T PF00083_consen 171 RILLIFGAIP---------------------------------SLLVLL-LRFFLPESPRWLLSKGRDEEAEKV------ 210 (451)
T ss_pred cccccccccc---------------------------------cccccc-cccccccccceecccccccccccc------
Confidence 4433200000 000000 112234444444333322211100
Q ss_pred hhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCCCCCccHHHhhchHH-----HHHHHHHHHhhccccce
Q 007665 296 TLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKRGEDYGILQALLSID-----MLILFLATFCGLGCSLT 370 (594)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~~~~~~~~~~~~ 370 (594)
..+.+++++.+. +.++..++.++.++ .+.+++++++++. +..+.+..+........
T Consensus 211 --------l~~~~~~~~~~~---------~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~ 271 (451)
T PF00083_consen 211 --------LRKLRGKEIEDE---------EIEEIKAEKKESQE--SKASWRDLFRNKKYRKRLLIALLLQFFQQFSGINF 271 (451)
T ss_pred --------cccccccccccc---------cccccccccccccc--cceeeeecccccccccccccccccccccccccccc
Confidence 000000000000 00000000000000 0022344444432 11122222222222233
Q ss_pred eeccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHh-----ccCc
Q 007665 371 AIDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIA-----FPKP 445 (594)
Q Consensus 371 ~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~-----~~~~ 445 (594)
..++.+.+.+..|.++. -.......+...++.+++.++.||+|||. ++..+..+++++.+.+. ..+.
T Consensus 272 ~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~------~~i~~~~~~~~~~~~~~~~~~~~~~~ 343 (451)
T PF00083_consen 272 IFYYSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRK------LLIIGLLLMAICSLILGIIFFLGVSS 343 (451)
T ss_pred ccccccccccccccccc--ccccccccccccccccccccccccccccc------cccccccccccccccccccccccccc
Confidence 44455667777777666 22334556777788888889999999984 34444444444433332 1111
Q ss_pred -----chHHHHHHHHHHHhh-hhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhhc
Q 007665 446 -----GSVYVASLLVGFSYG-AQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGM 519 (594)
Q Consensus 446 -----~~~~~~~~l~G~~~g-~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~ 519 (594)
....+...+...+.+ +..+....+.+|.||.+.|+++.|+......+++++ +|.+...+.+.
T Consensus 344 ~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i-~~~~~~~~~~~----------- 411 (451)
T PF00083_consen 344 SSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFI-IPFLFPYLFNN----------- 411 (451)
T ss_pred ccccccccceeeeeccccccccccccccccccccccccccccccccccccccccccc-ccccccccccc-----------
Confidence 112222222223333 223444577899999999999999999999999876 78777777766
Q ss_pred ccccCCCcccccccchHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhHHHH
Q 007665 520 TRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFILVMRTRRYYSGDIYKK 571 (594)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 571 (594)
.+....+.+.+++++++.+..+++.+|+|+++.+|+++.
T Consensus 412 -------------~~~~~~~~i~~~~~~i~~i~~~~~lpET~g~~l~ei~~~ 450 (451)
T PF00083_consen 412 -------------LGGWGVFLIFAGVCLIAIIFVYFFLPETKGKTLEEIQEM 450 (451)
T ss_pred -------------ccccccchhhHHHHHHHHhheeEEEeeCCCCCHHHHHhh
Confidence 233566777778888888888888999999888777654
No 96
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.84 E-value=4.7e-19 Score=179.68 Aligned_cols=136 Identities=13% Similarity=-0.030 Sum_probs=117.7
Q ss_pred HHHHhhhhhhchhhhHHHHHHHhCCCHhH-HHHHH-HHHhhhhhhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHH
Q 007665 33 LIMAGAGATYLFGTYSKEIKSTLGYDQTT-LNLLS-TCKDLGANVGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAV 110 (594)
Q Consensus 33 l~~~~~g~~~~~~~~~~~l~~~~~~s~~~-~~~~~-~~~~~~~~~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~ 110 (594)
+..+..-.....+...|.+.+|+|+|.+| .+.+. .++..+.++.+++|.++||+|.|+++.++.+..++.+++..++
T Consensus 34 ~fGF~~e~R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa- 112 (511)
T TIGR00806 34 FYGFMAQFRPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLG- 112 (511)
T ss_pred HHHHHHHhhchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH-
Confidence 33444446677888999999999999999 88854 4444555778999999999999999999999999999888776
Q ss_pred hhccCChhHHHHHHHHHHHhhhhhhhhhhhHhHHhhcCC-CceeehhHHHHHhhhhHHHHHHHHHHH
Q 007665 111 MKKIAKPKVWQMCLYICIGANSQNFANTGSLVTCVKNFP-ESRGMMLGLMKGFVGLSGAVFTQIYLA 176 (594)
Q Consensus 111 ~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp-~~rg~~~gi~~~~~glg~~i~~~l~~~ 176 (594)
+++..+.+.|++.|++.|..+ +...++.+||| ++|+++.|+..++..+|.++++++...
T Consensus 113 ------~Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql 172 (511)
T TIGR00806 113 ------TSVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL 172 (511)
T ss_pred ------HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 688999999999999999999 88999999998 579999999999999999999877765
No 97
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.83 E-value=7.9e-20 Score=168.79 Aligned_cols=359 Identities=15% Similarity=0.106 Sum_probs=227.7
Q ss_pred HHHHhhhhhhchh---hhHHHHHHHhCCCHhHHHHHHHHHhhhh-hhhhhhhhhhcc-cCchHHHHHHHHHHHHHHHHHH
Q 007665 33 LIMAGAGATYLFG---TYSKEIKSTLGYDQTTLNLLSTCKDLGA-NVGVLSGLLAEV-TPPWLVLLVGSAMNFGGYFMIW 107 (594)
Q Consensus 33 l~~~~~g~~~~~~---~~~~~l~~~~~~s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr-~G~r~v~~~g~~l~~ig~~l~~ 107 (594)
++....|..++|. ....+++.+.+++.++..++-+.+..-. +...++|++.|| +|.|...++=..+..+|-++++
T Consensus 49 mc~lgfgsyfcyd~p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa 128 (459)
T KOG4686|consen 49 MCLLGFGSYFCYDAPGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFA 128 (459)
T ss_pred HHHhcccceeecCCchhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 3344556666663 4556677788888888887544444444 447799999997 5888777776666777777764
Q ss_pred HHHhhccCChhHHHHHHHHHHHhhhhhhhhhhhHhHHhhcCC-CceeehhHHHHHhhhhHHHHHHHHHHHHhCCChHHHH
Q 007665 108 LAVMKKIAKPKVWQMCLYICIGANSQNFANTGSLVTCVKNFP-ESRGMMLGLMKGFVGLSGAVFTQIYLAIYGNDAKSMI 186 (594)
Q Consensus 108 ~a~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp-~~rg~~~gi~~~~~glg~~i~~~l~~~l~~~~~~~~~ 186 (594)
+. .+. +.+|++..+|++.|+|.-.....-..++.-||. |+-+.++|+..+..-+|+.+--.+...+.+.-.
T Consensus 129 ~G---gi~-~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~~---- 200 (459)
T KOG4686|consen 129 AG---GIS-HAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTMG---- 200 (459)
T ss_pred hc---hHH-HHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHHH----
Confidence 32 222 689999999999999988777777788889996 789999999877766777653333222221100
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHHhhhhcch
Q 007665 187 LLIAWLPALVSLVFVYTIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCIFVFLPLF 266 (594)
Q Consensus 187 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (594)
+..| ..+-. .+++++........ ..+.+++-..
T Consensus 201 ------------------~~~~---~~ghT-----------~LG~~l~~~~~tc~---------------~slical~lg 233 (459)
T KOG4686|consen 201 ------------------RMFP---GVGHT-----------LLGLWLCFEVKTCK---------------QSLICALSLG 233 (459)
T ss_pred ------------------Hhcc---cchHH-----------HHHHHHHHHHHHHH---------------HHHHHHHHhh
Confidence 0000 00000 01111111100000 0000110000
Q ss_pred hhhhhhhhhhhcCCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCCCCCccHH
Q 007665 267 IAFREEFAAWQQRKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKRGEDYGIL 346 (594)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (594)
+ ..++.++...+++ ... -++|+-...
T Consensus 234 ~-~D~rAerilh~e~------------------------------------g~~-------------Ge~pkLtdv---- 259 (459)
T KOG4686|consen 234 L-SDDRAERILHLEE------------------------------------GFL-------------GEEPKLTDV---- 259 (459)
T ss_pred h-hhhHHHHHHhhhc------------------------------------Ccc-------------cCCcccccc----
Confidence 0 0111000000000 000 000110000
Q ss_pred HhhchHHHHHHHHHHHhhccccceeeccHHHHHHh-cCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHH
Q 007665 347 QALLSIDMLILFLATFCGLGCSLTAIDNLGQIGES-LGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLI 425 (594)
Q Consensus 347 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~ 425 (594)
.-..|.||.+...+++.+...+.++..-|.++++ .|+|+..++.+.+.+...+.+..++.|.++||+|++. +.
T Consensus 260 -~~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~-----~w 333 (459)
T KOG4686|consen 260 -NTFYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNL-----WW 333 (459)
T ss_pred -cccCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhccee-----hh
Confidence 0125778998888888776666666666777775 5999999999999999999999999999999999875 55
Q ss_pred HHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhh
Q 007665 426 MAISLILSAVGDVLIAFPKPGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRL 505 (594)
Q Consensus 426 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l 505 (594)
+..+++...++-..+.+. .+..++...+.|+.+.......+..++.+.|.++.|+++|+++...++|-.+ .|.+.|++
T Consensus 334 v~~a~~~tl~~H~~l~Ft-~lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~-i~Iiag~i 411 (459)
T KOG4686|consen 334 VASACILTLLGHSGLFFT-FLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAF-IPIIAGFI 411 (459)
T ss_pred HHHHHHHHHHHhhhHHhh-hccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhH-Hhhhhhee
Confidence 566666666665555433 3345667788899888777767777888899999999999999999999876 79999999
Q ss_pred hhH
Q 007665 506 YDR 508 (594)
Q Consensus 506 ~~~ 508 (594)
.|.
T Consensus 412 ~d~ 414 (459)
T KOG4686|consen 412 ADG 414 (459)
T ss_pred ecC
Confidence 988
No 98
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.83 E-value=2.6e-18 Score=182.28 Aligned_cols=360 Identities=13% Similarity=0.067 Sum_probs=234.2
Q ss_pred hhhHHHHHHHhCCCHhHHHHHHHHHhhhh-hhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHH
Q 007665 45 GTYSKEIKSTLGYDQTTLNLLSTCKDLGA-NVGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIAKPKVWQMC 123 (594)
Q Consensus 45 ~~~~~~l~~~~~~s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~~~~~~l~ 123 (594)
.+..+.+.-+..-|...++++.....+-. ++++++|.++||+.||++++.+-++..+..++.++. ......+.+.++
T Consensus 30 ~va~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l--~~~~~~~~~~Ll 107 (524)
T PF05977_consen 30 TVALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVL--AFFGLLSPWLLL 107 (524)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHH--HHhCcCCHHHHH
Confidence 33345555566678888998766665555 679999999999999999999988876665544332 122224678888
Q ss_pred HHHHHHhhhhhhhhhhhHhHHhhcCCC-ceeehhHHHHHhhhhHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHH
Q 007665 124 LYICIGANSQNFANTGSLVTCVKNFPE-SRGMMLGLMKGFVGLSGAVFTQIYLAIYGNDAKSMILLIAWLPALVSLVFVY 202 (594)
Q Consensus 124 ~~r~l~G~g~g~~~~~~~~~i~~~fp~-~rg~~~gi~~~~~glg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~l~~~~ 202 (594)
+.-++.|++.++..|+-.+++.+..|+ +...+.++......++-+++|.+++.++...+-.+.+.++....+..++
T Consensus 108 ~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~--- 184 (524)
T PF05977_consen 108 ILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISIL--- 184 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHH---
Confidence 999999999999999999999999985 6788999988888888888887776554322111111111111000000
Q ss_pred HhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHHhhhhcchhhhhhhhhhhhcCCCC
Q 007665 203 TIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCIFVFLPLFIAFREEFAAWQQRKQP 282 (594)
Q Consensus 203 ~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (594)
++ ...+++.
T Consensus 185 ----------------------------------------------------------~l----~~~~~~~--------- 193 (524)
T PF05977_consen 185 ----------------------------------------------------------AL----LRWKPPP--------- 193 (524)
T ss_pred ----------------------------------------------------------HH----HHccccc---------
Confidence 00 0001000
Q ss_pred CCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCCCCCccHHHhhchHHHHHHHHHHH
Q 007665 283 TPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKRGEDYGILQALLSIDMLILFLATF 362 (594)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 362 (594)
++. + . ..+.....-...++...++|......+..+
T Consensus 194 -~~~------~------------------------~--------------~~e~~~~~l~~G~ryv~~~~~l~~~l~~~~ 228 (524)
T PF05977_consen 194 -PPS------S------------------------L--------------PRERFFSALREGLRYVRSSPPLRSVLLRSF 228 (524)
T ss_pred -ccc------c------------------------c--------------chhhhhhhHHHHHHHHhcchHHHHHHHHHH
Confidence 000 0 0 000000000112233444555544333222
Q ss_pred hhccccceeeccHHHHHH-hcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHh
Q 007665 363 CGLGCSLTAIDNLGQIGE-SLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIA 441 (594)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~-~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~ 441 (594)
+.......+...+|.+.+ .+|.++...|++.+..+++.++|.++.+.+.+|+.++ .++..+.++.+++++.+.
T Consensus 229 ~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~------~lv~~~~~~~a~~~~~la 302 (524)
T PF05977_consen 229 LFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSR------RLVLLASLLFALALLLLA 302 (524)
T ss_pred HHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcc------hhhHHHHHHHHHHHHHHh
Confidence 222222223344677765 4688888899999999999999999988877766543 345566666666666666
Q ss_pred ccC-cchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhhcc
Q 007665 442 FPK-PGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGMT 520 (594)
Q Consensus 442 ~~~-~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~ 520 (594)
..+ .+...+..++.|++.........+.+.+..|++.+|+++++..+....+..+ |..+.|.+.|.
T Consensus 303 l~~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~l-Gsll~G~la~~------------ 369 (524)
T PF05977_consen 303 LSPSFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPL-GSLLWGFLADH------------ 369 (524)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHH-HHHHHHHHHHH------------
Confidence 544 3455666788899888888888899999999999999999998887777665 89999999888
Q ss_pred cccCCCcccccccchHHHHHHHHHHHHHHHHHHHHH
Q 007665 521 RAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFIL 556 (594)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 556 (594)
.+.+.++.+.+++.+++.++....
T Consensus 370 ------------~g~~~al~~a~~~lll~~~~~~~~ 393 (524)
T PF05977_consen 370 ------------FGVRTALLIAGAALLLSALIALRF 393 (524)
T ss_pred ------------hCHHHHHHHHHHHHHHHHHHHHHh
Confidence 567777777776666666555443
No 99
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.79 E-value=1.7e-17 Score=179.56 Aligned_cols=385 Identities=17% Similarity=0.117 Sum_probs=225.7
Q ss_pred HHHhCCCHhHHHHHHHHHhhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHh
Q 007665 52 KSTLGYDQTTLNLLSTCKDLGANV-GVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIAKPKVWQMCLYICIGA 130 (594)
Q Consensus 52 ~~~~~~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~~~~~~l~~~r~l~G 130 (594)
.+.+..+.....+..+.+.+|... .++.|.++||+|||++++++.++..++.++.+++ ++++.+++.|+++|
T Consensus 110 ~~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a-------~~~~~~~~~Rfl~G 182 (521)
T KOG0255|consen 110 WNLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFA-------PNYWMFLIFRFLSG 182 (521)
T ss_pred hceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHh-------CcHHHHHHHHHHHH
Confidence 356666777777777777788766 5599999999999999999999999998888776 89999999999999
Q ss_pred hhhhhhhhhhHhHHhhcC-CCceeehhHHHHHhhhhHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHhccCCC
Q 007665 131 NSQNFANTGSLVTCVKNF-PESRGMMLGLMKGFVGLSGAVFTQIYLAIYGNDAKSMILLIAWLPALVSLVFVYTIRPLKV 209 (594)
Q Consensus 131 ~g~g~~~~~~~~~i~~~f-p~~rg~~~gi~~~~~glg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 209 (594)
++.+..+.....++.|++ |++|+.+..+ ....-.++.+++++.+++.+ .|+++.++...|....++.
T Consensus 183 ~~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~--------- 250 (521)
T KOG0255|consen 183 FFGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLL--------- 250 (521)
T ss_pred hhccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHH---------
Confidence 999999999999999999 5789999999 55555777777766666555 4444444444343332221
Q ss_pred CCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHHhhhhcchhhhhhhhhhhhcCCCCCCCcccc
Q 007665 210 SSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCIFVFLPLFIAFREEFAAWQQRKQPTPASAVV 289 (594)
Q Consensus 210 ~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (594)
+++.+|.++|+..+.+.++....
T Consensus 251 ---------------------------------------------------------~~l~~Es~rwl~~~g~~~~a~~~ 273 (521)
T KOG0255|consen 251 ---------------------------------------------------------WFLPPESPRWLLSKGRIDEAIKI 273 (521)
T ss_pred ---------------------------------------------------------HHccCcChHHHHHcCchHHHHHH
Confidence 11122223332221111100000
Q ss_pred cccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCCCCCccHHHhhchHHHHHHHHHHHhhccccc
Q 007665 290 IVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKRGEDYGILQALLSIDMLILFLATFCGLGCSL 369 (594)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 369 (594)
.....+.++...+..+ . .+.... ....+.....+.....++++.|++....+...+......
T Consensus 274 -----------l~~~a~~n~~~~~~~~-~-----~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~ 335 (521)
T KOG0255|consen 274 -----------LKKIAKLNGRKLSVKE-L-----LRLELL-LRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFVFS 335 (521)
T ss_pred -----------HHHHHhhcCCCCCcHH-H-----HHHHHH-hhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHHHHHh
Confidence 0000000000000000 0 000000 000000001112346777887754332222222221111
Q ss_pred eeeccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhccC-c-c-
Q 007665 370 TAIDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAFPK-P-G- 446 (594)
Q Consensus 370 ~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~~~-~-~- 446 (594)
...+-+......+|.+ ........+.....+....+...|++||| .....+..+..++++...... . .
T Consensus 336 ~~y~gl~~~~~~lg~~---~~~~~~~~~~~~~p~~~~~~~~~~~~gR~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (521)
T KOG0255|consen 336 LVYYGLSLNVSGLGGN---IYLNFTLSGLVELPAYFRNGLLLPEFGRR------PPLFLSLFLAGIGLLLFGWLPDDLGG 406 (521)
T ss_pred HHHHhhhhhhhhcCch---HHHHHHHHHHHHhhHHHHHHHHHHHhCcH------HHHHHHHHHHHHHHHHHHHhhccchh
Confidence 1111122222333322 22334444557777777888999999777 566777777777766655432 2 2
Q ss_pred -hHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhhcccccCC
Q 007665 447 -SVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGMTRAMVK 525 (594)
Q Consensus 447 -~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~ 525 (594)
...+...+..++.+..+.....+..|++|...|+.+.+...+...+++++ +|.+.-.....
T Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~-ap~~~~~~~~~----------------- 468 (521)
T KOG0255|consen 407 WLHWILPLLGKFFIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSIL-APLFPLLLRQM----------------- 468 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhhh-----------------
Confidence 23444455556667777778899999999999999999999999999865 77554333222
Q ss_pred CcccccccchHHHHHHHHHHHHHHHHHHHHHHhhhhhccc
Q 007665 526 DLTCIGRQCYRLSFTILAGVNIFGALITFILVMRTRRYYS 565 (594)
Q Consensus 526 ~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 565 (594)
.....+.+.+.+..+..+++..+.++++....
T Consensus 469 --------~~~~~~~~~~~~~~l~~~~~~~~lpet~~~~l 500 (521)
T KOG0255|consen 469 --------FPLLGLILFGWLALLLGLLSLLLLPETKGKPL 500 (521)
T ss_pred --------cccchHHHHHHHHHHHHHHHHhcCcccCCCCC
Confidence 11122222455666666667667778777543
No 100
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.78 E-value=1.3e-17 Score=165.45 Aligned_cols=409 Identities=17% Similarity=0.122 Sum_probs=259.3
Q ss_pred HHHhhhHHHHHHHHHHHHhhhh-hhchhhhHHHHHHHhCCCHhHHHHHHHHHhhhh-hhhhhhhhhhcccCchHHHHHHH
Q 007665 19 QVLRGRWFMMFASFLIMAGAGA-TYLFGTYSKEIKSTLGYDQTTLNLLSTCKDLGA-NVGVLSGLLAEVTPPWLVLLVGS 96 (594)
Q Consensus 19 ~~~~~~w~~~~~~~l~~~~~g~-~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr~G~r~v~~~g~ 96 (594)
+..++||.++++..+...+++. .-.|+....+..+.++ +....-|.+..+.+-. .+++++-|+.|++|-|...++|.
T Consensus 38 rVy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt 116 (480)
T KOG2563|consen 38 RVYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGT 116 (480)
T ss_pred ccchhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHH
Confidence 4678999999988888888874 4577888888888888 7677777776665555 56999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhccCChhHH--HHHHHHHHHhhhhhhhhhhhHhHHhhcCC-CceeehhHHHHHhhhhHHHHHHHH
Q 007665 97 AMNFGGYFMIWLAVMKKIAKPKVW--QMCLYICIGANSQNFANTGSLVTCVKNFP-ESRGMMLGLMKGFVGLSGAVFTQI 173 (594)
Q Consensus 97 ~l~~ig~~l~~~a~~~~~~~~~~~--~l~~~r~l~G~g~g~~~~~~~~~i~~~fp-~~rg~~~gi~~~~~glg~~i~~~l 173 (594)
.+.++|..+-..+...+.. +.++ ....+..+.+.+..+....+..+..-||| ++|..|..+-..+..+|.+++-.+
T Consensus 117 ~ln~iGa~Ir~iss~p~v~-~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~ll 195 (480)
T KOG2563|consen 117 VLNGIGAWIRLISSLPFVP-PLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLL 195 (480)
T ss_pred HHHHHHHHHhhhccCcccc-ccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhc
Confidence 9999998887655433332 3444 55578888898888888777788888996 789999988877777887776432
Q ss_pred HHHHhCCChHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccch
Q 007665 174 YLAIYGNDAKSMILLIAWLPALVSLVFVYTIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGS 253 (594)
Q Consensus 174 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (594)
-..+. ...+..+...|.-.-. +..+.++ +++.+
T Consensus 196 ppilV--------------------------~~~~~~~~~~~~~~~~-f~~~~~l-~~l~l------------------- 228 (480)
T KOG2563|consen 196 PPILV--------------------------PSSKDSEDNSWLFFTL-FLGVECL-AALLL------------------- 228 (480)
T ss_pred cceec--------------------------CCCCCcchhHHHHHHH-HHHHHHH-HHHHH-------------------
Confidence 21111 1111111112221100 1111110 00100
Q ss_pred hhHHHHhhhhcchhhhhhhhhhhhcCCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCC
Q 007665 254 AIAVCIFVFLPLFIAFREEFAAWQQRKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNI 333 (594)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (594)
+.....+++ ....|+.. . .
T Consensus 229 ----------~l~~~~~~~--------~P~tPps~----s------------------------~--------------- 247 (480)
T KOG2563|consen 229 ----------ALVLFVFTK--------KPPTPPSA----S------------------------Q--------------- 247 (480)
T ss_pred ----------HHHHHhcCC--------CCCCCCch----h------------------------H---------------
Confidence 000111110 00011100 0 0
Q ss_pred CCCCCCCCCccHHHhhchHHHHHHHHHHHhhccccceeeccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHH
Q 007665 334 FKPPKRGEDYGILQALLSIDMLILFLATFCGLGCSLTAIDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEI 413 (594)
Q Consensus 334 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr 413 (594)
..+.+..-..+.++.++|++|.++.+.+....+..+.....+...+...|++...+|.......+++++|.++.|.+.||
T Consensus 248 ~~~~~~~f~~si~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dk 327 (480)
T KOG2563|consen 248 AALQDASFPKSIKSCFKNRQFIILAICYGIGLGLFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADK 327 (480)
T ss_pred hhhhcCcHHHHHHHHHcCccHHHHHHHHhhhHHHHHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhh
Confidence 00001112356789999999998888887776655544433333334458888889999999999999999999999999
Q ss_pred HhhhccCCchHHHHHHHHHHHHH-HHHHhcc----CcchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhc
Q 007665 414 ILLKYKVPRPLIMAISLILSAVG-DVLIAFP----KPGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQL 488 (594)
Q Consensus 414 ~g~r~~~~~~~~~~~~~~~~~i~-~~~~~~~----~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 488 (594)
..+-+ ....+......++ +.+.... ....++....++|++.-...|+...+..|..-+..-++..|+.++
T Consensus 328 tk~fk-----~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~ 402 (480)
T KOG2563|consen 328 TKKFK-----LTTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNL 402 (480)
T ss_pred hhhHH-----HHHHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEe
Confidence 85432 2222222223333 2222211 234566677888998888888877788888888999999999999
Q ss_pred cchhhhhhhhhhHHHhhhhHHHHHhhhhhhcccccCCCcccccccchHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 007665 489 ASPLGSYVLNVIVVGRLYDREAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFILVMRTRRY 563 (594)
Q Consensus 489 ~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 563 (594)
..++-++++ ..+.+...+... . ...+...-+.+...+++++++..++++..|+.
T Consensus 403 ~gq~f~~~~-~~~~~~~~~~~~---~-----------------~~~~~~~~i~~~~~~~l~~~lva~~r~~y~R~ 456 (480)
T KOG2563|consen 403 SGQIFGVIL-VFIMGILAEDLG---P-----------------PGNTFPANIFLTVSALLGAILVAFFRPDYRRL 456 (480)
T ss_pred ehhHHHHHH-HHHHHHHhhccC---C-----------------CCCCccchhHhHHHHHHHHHHHhhhhhhHHhH
Confidence 888877653 445555544310 0 01244455666666777777777776655553
No 101
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.77 E-value=5.8e-18 Score=163.63 Aligned_cols=336 Identities=17% Similarity=0.086 Sum_probs=199.7
Q ss_pred CHhHHHHHHHHHhhhh-hhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHhhhhhhh
Q 007665 58 DQTTLNLLSTCKDLGA-NVGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIAKPKVWQMCLYICIGANSQNFA 136 (594)
Q Consensus 58 s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~~~~~~l~~~r~l~G~g~g~~ 136 (594)
+..-.|.+++.+.+.. +.++.+|.++||+|||+++++|++..++...+.+++ .|+..+...|++.|+.-|..
T Consensus 66 ~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S-------~~F~afv~aR~l~Gi~kgnl 138 (451)
T KOG2615|consen 66 SVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALS-------RNFAAFVLARFLGGIFKGNL 138 (451)
T ss_pred cchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHhhhhccCch
Confidence 3445666777766666 458999999999999999999999988887777655 78844455699999998865
Q ss_pred hhhhHhHHhhcCC-CceeehhHHHHHhhhhHHHHHHHHHHHHhC-C-ChHHHHHHHHHHHHHHHHHHHHHhccCCCCCCC
Q 007665 137 NTGSLVTCVKNFP-ESRGMMLGLMKGFVGLSGAVFTQIYLAIYG-N-DAKSMILLIAWLPALVSLVFVYTIRPLKVSSHP 213 (594)
Q Consensus 137 ~~~~~~~i~~~fp-~~rg~~~gi~~~~~glg~~i~~~l~~~l~~-~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 213 (594)
....++++|.++ |+|+++++.++..+++|-+++|.+++++.. . -...++++. |.....+
T Consensus 139 -~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~al---P~~~v~i-------------- 200 (451)
T KOG2615|consen 139 -SVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFAL---PCLLVFI-------------- 200 (451)
T ss_pred -HHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHH---HHHHHHH--------------
Confidence 466789999996 679999999999999999998877776543 0 001111110 1100000
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHHhhhhcchhhhhhhhhhhhcCCCCCCCcccccccc
Q 007665 214 NELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCIFVFLPLFIAFREEFAAWQQRKQPTPASAVVIVFE 293 (594)
Q Consensus 214 ~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (594)
+... ....+.+.+|--+..+++ . ++
T Consensus 201 ------------------~a~~-------------------~v~~~~~~lpETL~~rk~------~------------~~ 225 (451)
T KOG2615|consen 201 ------------------LAAG-------------------DVTFFPWFLPETLPLRKR------N------------DE 225 (451)
T ss_pred ------------------HHHH-------------------HHHHHHHhCCccccchhh------c------------cc
Confidence 0000 000111111100000000 0 00
Q ss_pred cchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCCCCCccHHHhhchHH------HH-HHHHHHHhhcc
Q 007665 294 QTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKRGEDYGILQALLSID------ML-ILFLATFCGLG 366 (594)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~------~~-~~~~~~~~~~~ 366 (594)
+ ++.+...++ +++....+ . .....++||+. .| .+.+-++....
T Consensus 226 ~------------------~~~~~~~~~--~~~~~~~~-~---------~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~ 275 (451)
T KOG2615|consen 226 H------------------STLQEAADD--RLALLKFA-R---------IFKVAALRNPPLLDFISVLRIFGLHYFLYLE 275 (451)
T ss_pred c------------------cchhhhhhh--hhhhcchh-h---------hhhhhhhcCccccchHHHHHHHHHHHHHHHH
Confidence 0 000000000 00000000 0 00011111111 11 11111121111
Q ss_pred ccceeeccHHHHH--HhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhcc-
Q 007665 367 CSLTAIDNLGQIG--ESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAFP- 443 (594)
Q Consensus 367 ~~~~~~~~~~~~~--~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~~- 443 (594)
.+ ....+....+ +..|+++.+.|.+++..++.+.+-........||...- ....+.....++.-.++++...
T Consensus 276 l~-s~~~~t~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~----~~a~l~~~l~~~vP~~llls~~~ 350 (451)
T KOG2615|consen 276 LF-SGLENTVLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGN----IKAVLLFSLLLIVPAFLLLSLAR 350 (451)
T ss_pred HH-HHHHhhHHHhhcCccCCChhhheeeeehhhHHHHHHHHhccccccccccc----hhhHHHHHHHHHHHHHHHHhccc
Confidence 11 1112223334 34689999999999999998888888777777776411 1133344444444444444433
Q ss_pred CcchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHH
Q 007665 444 KPGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDRE 509 (594)
Q Consensus 444 ~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~ 509 (594)
.+..++....+..++.....+....+.....|.+++|++.|+......++-++ ||++.|.+....
T Consensus 351 ~~~~l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRai-GPlv~g~i~~Ws 415 (451)
T KOG2615|consen 351 TPVVLYLGSTLKSFSTASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAI-GPLVSGVIFSWS 415 (451)
T ss_pred cchhhhHHHHHHHHHHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHh-hhhhhheeEEEe
Confidence 35677888888889888888999999999999999999999999999999986 999998988773
No 102
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.76 E-value=1.4e-15 Score=159.77 Aligned_cols=188 Identities=16% Similarity=0.212 Sum_probs=147.1
Q ss_pred cHHHhhchHHHHHHHHHHHhhccccceeeccHHHHHH-hcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCc
Q 007665 344 GILQALLSIDMLILFLATFCGLGCSLTAIDNLGQIGE-SLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPR 422 (594)
Q Consensus 344 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~ 422 (594)
++++..|.|+...++++.++..-....+......|.+ .+|++..+...+..+..+..++|.+++|++.||+|.|.+
T Consensus 273 t~k~~~~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~--- 349 (477)
T PF11700_consen 273 TFKEIRKLRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTK--- 349 (477)
T ss_pred HHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchh---
Confidence 4566667788777777777665555555555566665 679999998888899999999999999999999997721
Q ss_pred hHHHHHHHHHHHHHHHHHh--------ccCcchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhh
Q 007665 423 PLIMAISLILSAVGDVLIA--------FPKPGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGS 494 (594)
Q Consensus 423 ~~~~~~~~~~~~i~~~~~~--------~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~ 494 (594)
+.++........+....+. ..+.+.+++..++.|++.|..++..-++.+++.|+++.++.+|+..+.....+
T Consensus 350 ~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss 429 (477)
T PF11700_consen 350 RTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASS 429 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHH
Confidence 2333332223233333332 33456788889999999999999999999999999999999999999999999
Q ss_pred hhhhhhHHHhhhhHHHHHhhhhhhcccccCCCcccccccchHHHHHHHHHHHHHHHHHHHHHHh
Q 007665 495 YVLNVIVVGRLYDREAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFILVM 558 (594)
Q Consensus 495 ~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 558 (594)
++ ||+++|.+.|. +++.|..+....++.++++++...+..
T Consensus 430 ~l-GPll~g~i~~~-----------------------tg~~r~g~~~l~~lf~~gl~ll~~v~~ 469 (477)
T PF11700_consen 430 WL-GPLLFGLITDA-----------------------TGSQRYGFLFLLVLFLIGLILLFFVDV 469 (477)
T ss_pred HH-HHHHHHHHHHH-----------------------hCCchhHHHHHHHHHHHHHHHHhhccc
Confidence 86 99999999998 467999999999999999887766543
No 103
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.75 E-value=2.7e-16 Score=167.70 Aligned_cols=344 Identities=10% Similarity=0.030 Sum_probs=190.3
Q ss_pred hHHHHHHHhCCCHhHHHHH-HHHHhhhhhhhhhhhhhhc----ccCc-hHHHHHHHHHHHHHHHHHHHHHhhccCChhHH
Q 007665 47 YSKEIKSTLGYDQTTLNLL-STCKDLGANVGVLSGLLAE----VTPP-WLVLLVGSAMNFGGYFMIWLAVMKKIAKPKVW 120 (594)
Q Consensus 47 ~~~~l~~~~~~s~~~~~~~-~~~~~~~~~~~~~~G~l~D----r~G~-r~v~~~g~~l~~ig~~l~~~a~~~~~~~~~~~ 120 (594)
+...+.+.+|++..+++.+ ...-..-.+..|+.|.++| |+|| |+.++.|.+.++++..+++.. ........+.
T Consensus 29 l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~-p~~~~~~~~~ 107 (473)
T PRK10429 29 LMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSA-HLFEGTAQYV 107 (473)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcC-CCCCccHHHH
Confidence 4455678889999999994 4555555677999999999 6699 556666777777776555321 0001111233
Q ss_pred HHHHHHHHHhhhhhhhhhhhHhHHhhcC--CCceeehhHHHHHhhhhHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHH
Q 007665 121 QMCLYICIGANSQNFANTGSLVTCVKNF--PESRGMMLGLMKGFVGLSGAVFTQIYLAIYGNDAKSMILLIAWLPALVSL 198 (594)
Q Consensus 121 ~l~~~r~l~G~g~g~~~~~~~~~i~~~f--p~~rg~~~gi~~~~~glg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~l 198 (594)
.+++..++.+++..+...+..+.+.+.- |++|.+..++-..+..+|+.+.+.+.. |.+ .
T Consensus 108 ~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~-----------------~~~-~- 168 (473)
T PRK10429 108 FVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTL-----------------PFV-N- 168 (473)
T ss_pred HHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------HHH-H-
Confidence 4445566667777777777777778876 357998888855555566555432221 111 0
Q ss_pred HHHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHHhhhhcchhhhhhhhhhhhc
Q 007665 199 VFVYTIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCIFVFLPLFIAFREEFAAWQQ 278 (594)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (594)
... ..+.+..+.....+ .++..+.. .+...+..+|+.
T Consensus 169 ----~~g------~~~~~~g~~~~~~i---~~~~~~~~-------------------------~~~~~~~~~e~~----- 205 (473)
T PRK10429 169 ----YVG------GGDRGFGFQMFTLV---LIAFFIVS-------------------------TIITLRNVHEVY----- 205 (473)
T ss_pred ----HhC------CCchhhhHHHHHHH---HHHHHHHH-------------------------HHHHHcCceecC-----
Confidence 000 01111122211111 11000000 000000011100
Q ss_pred CCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCCCCCccHHHhhchHHHHHHH
Q 007665 279 RKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKRGEDYGILQALLSIDMLILF 358 (594)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 358 (594)
+++. + + ..++++......++.+++||.++.+.
T Consensus 206 -----~~~~-----~------------------------~--------------~~~~~~~~~~~~~~~~~~n~~~~~ll 237 (473)
T PRK10429 206 -----SSDN-----Q------------------------V--------------SAEGSHLTLKDIVALIYKNDQLSCLL 237 (473)
T ss_pred -----Cccc-----c------------------------c--------------cccccCCCHHHHHHHHhcCHHHHHHH
Confidence 0000 0 0 00000001112335566888887766
Q ss_pred HHHHhhccccceeeccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHH
Q 007665 359 LATFCGLGCSLTAIDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDV 438 (594)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~ 438 (594)
...++............+++.+....+....+.+.++..++.+++.++.++++||+|+|+ .+..+.++.+++.+
T Consensus 238 ~~~~~~~~~~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~------~~~~~~~~~~~~~~ 311 (473)
T PRK10429 238 GMALAYNIASNIINGFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRI------LWAGASIFPVLSCG 311 (473)
T ss_pred HHHHHHHHHHHHHhhheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHH------HHHHHHHHHHHHHH
Confidence 655544332222222233333433223444555666677888999999999999999874 33444444333332
Q ss_pred HHh----c-cC-cchHHHHHHHHHHHhhhhHHHHHHHHHHhcc-------CCccccccchhhccchhhhhhhhhhHHHhh
Q 007665 439 LIA----F-PK-PGSVYVASLLVGFSYGAQLTLLFIIISELFG-------LKYYSTLFNCGQLASPLGSYVLNVIVVGRL 505 (594)
Q Consensus 439 ~~~----~-~~-~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~-------~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l 505 (594)
.+. . .. .+.+++..++.|++.+...+..+++++|..+ .+..|..+|.......++..+ ++.+.|.+
T Consensus 312 ~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al-~~~i~g~~ 390 (473)
T PRK10429 312 VLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAF-AAFFIGVV 390 (473)
T ss_pred HHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 221 1 12 2344555677888999888888899998854 455666889988999999876 89999998
Q ss_pred hhH
Q 007665 506 YDR 508 (594)
Q Consensus 506 ~~~ 508 (594)
.+.
T Consensus 391 l~~ 393 (473)
T PRK10429 391 LGL 393 (473)
T ss_pred HHH
Confidence 875
No 104
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.75 E-value=4.8e-16 Score=164.86 Aligned_cols=357 Identities=12% Similarity=0.056 Sum_probs=208.4
Q ss_pred HHHHhhhhh-hchhhhHHHHHHHhCCCHhHHHHHHHHHhhhhhhhhhhhhhhcccC-----chHHHHHHHHHHH-HHHHH
Q 007665 33 LIMAGAGAT-YLFGTYSKEIKSTLGYDQTTLNLLSTCKDLGANVGVLSGLLAEVTP-----PWLVLLVGSAMNF-GGYFM 105 (594)
Q Consensus 33 l~~~~~g~~-~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~~~~G~l~Dr~G-----~r~v~~~g~~l~~-ig~~l 105 (594)
...++.|.. .......|.+++++|+|.++++.+.+...+.-.+.+++|+++||++ ||+.++++.++.. ++ .
T Consensus 33 ~~y~~qGl~~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~--~ 110 (468)
T TIGR00788 33 QVLFVKGIAGLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPFAGVMSDTFPLFGYTKRWYLVLSGLLGSAIL--Y 110 (468)
T ss_pred HHHHHhhHHHHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccchHHHHHHHHHHHHHH--H
Confidence 344555543 3344567888899999999998876666666677888999999998 7777777766653 22 1
Q ss_pred HHHHHhhccCChhH-HHHHHHHHHHhhhhhhhhhhhHhHHhhcCCCceee---hhHHHHHhhhhHHHHHHHHHHHHhCCC
Q 007665 106 IWLAVMKKIAKPKV-WQMCLYICIGANSQNFANTGSLVTCVKNFPESRGM---MLGLMKGFVGLSGAVFTQIYLAIYGND 181 (594)
Q Consensus 106 ~~~a~~~~~~~~~~-~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp~~rg~---~~gi~~~~~glg~~i~~~l~~~l~~~~ 181 (594)
..++ . . ++. ....+..++.+++.+.....+-.+..|..+++++. +.++.....++|.++++.+.+.+.+..
T Consensus 111 ~~l~---~-~-~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~ 185 (468)
T TIGR00788 111 GLLP---G-K-VSSAKVAAAFIFLAALAKALYDVLVDSLYSERIRESPSAGPSLVSWMWGASATGGLISSLLGGPLLDKT 185 (468)
T ss_pred Hhcc---c-c-cchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhhcCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 1111 1 1 233 33334788999999999888888889988744333 333333444578888777776655543
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHHhh
Q 007665 182 AKSMILLIAWLPALVSLVFVYTIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCIFV 261 (594)
Q Consensus 182 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (594)
.|+..+++.....+..++...++
T Consensus 186 ~~~~~f~~~a~l~ll~~~~~~~~--------------------------------------------------------- 208 (468)
T TIGR00788 186 LTRILFLITAALLLLQLFVSNLS--------------------------------------------------------- 208 (468)
T ss_pred CcchHHHHHHHHHHHHHHHHHhc---------------------------------------------------------
Confidence 33333222211111111111111
Q ss_pred hhcchhhhhhhhhhhhcCCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCCCC
Q 007665 262 FLPLFIAFREEFAAWQQRKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKRGE 341 (594)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (594)
+|++ + ...+...+ + +.... . ....... ++....
T Consensus 209 --------~E~~-~------~~~~~~~~---~------------------------~~~~~-~---~~~~~~~-~~~~~~ 241 (468)
T TIGR00788 209 --------KERR-A------FVRPRIGT---Y------------------------LEMNM-A---LLTLGVL-ANVKVQ 241 (468)
T ss_pred --------cccc-c------cccccccc---c------------------------chhhh-h---hhhhhHH-HHHHHH
Confidence 1100 0 00000000 0 00000 0 0000000 000000
Q ss_pred CccHHHhhchHHHHHHHHHHHh--hccccceeeccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhcc
Q 007665 342 DYGILQALLSIDMLILFLATFC--GLGCSLTAIDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYK 419 (594)
Q Consensus 342 ~~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~ 419 (594)
....++.+++|.+|...+..++ ..........++ ...+.+|+++.+.+......++++++|..+.+.+.+|++.|
T Consensus 242 ~~~l~~~l~~~~i~~~l~fifl~~~~~~~~~~~~f~-~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r-- 318 (468)
T TIGR00788 242 ILGLRGAIQLLEIAKPLIFIFLSYANLPGASGSVFC-ATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYR-- 318 (468)
T ss_pred HHHHHHHHhcHHHHHHHHHHHHHHhhcCCCCceeEE-EEcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHH--
Confidence 1134556778888764443333 222111111111 11235799999999999999988888888888777666554
Q ss_pred CCchHHHHHHHHHHHHHHHHHh-c----------cCcchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhc
Q 007665 420 VPRPLIMAISLILSAVGDVLIA-F----------PKPGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQL 488 (594)
Q Consensus 420 ~~~~~~~~~~~~~~~i~~~~~~-~----------~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 488 (594)
.++.++.++.+++.+... . ..........++.+++.+..+.....++.+..|+++.|+.+++.+.
T Consensus 319 ----~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s 394 (468)
T TIGR00788 319 ----LLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLAS 394 (468)
T ss_pred ----HHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHH
Confidence 456666666666543321 0 1112334456788888888888889999999999999999999999
Q ss_pred cchhhhhhhhhhHHHhhhhH
Q 007665 489 ASPLGSYVLNVIVVGRLYDR 508 (594)
Q Consensus 489 ~~~lg~~~~gp~~~g~l~~~ 508 (594)
..++|..+ ++.+.|.+.+.
T Consensus 395 ~~~lg~~v-~~~~gg~l~~~ 413 (468)
T TIGR00788 395 ILHLGSSV-SGFLGVLLMET 413 (468)
T ss_pred HHHHHHHH-HHHHHHHHHHH
Confidence 99999976 88888888776
No 105
>PRK09669 putative symporter YagG; Provisional
Probab=99.74 E-value=2e-16 Score=167.53 Aligned_cols=339 Identities=12% Similarity=0.070 Sum_probs=190.0
Q ss_pred hHHHHHHHhCCCHhHHHHH-HHHHhhhhhhhhhhhhhhcc----cCch-HHHHHHHHHHHHHHHHHHHHHhhccCChhHH
Q 007665 47 YSKEIKSTLGYDQTTLNLL-STCKDLGANVGVLSGLLAEV----TPPW-LVLLVGSAMNFGGYFMIWLAVMKKIAKPKVW 120 (594)
Q Consensus 47 ~~~~l~~~~~~s~~~~~~~-~~~~~~~~~~~~~~G~l~Dr----~G~r-~v~~~g~~l~~ig~~l~~~a~~~~~~~~~~~ 120 (594)
+.+.+.+++|+|..+++.+ ......-++..|+.|.++|| +||| +.++.+.+.+++...+++... .......+.
T Consensus 32 l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p-~~~~~~~~~ 110 (444)
T PRK09669 32 LAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTP-DFGATGKII 110 (444)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCC-CCCcchHHH
Confidence 4556788999999999994 55555666789999999999 7775 555567677767665543321 011112344
Q ss_pred HHHHHHHHHhhhhhhhhhhhHhHHhhcCC--CceeehhHHHHHhhhhHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHH
Q 007665 121 QMCLYICIGANSQNFANTGSLVTCVKNFP--ESRGMMLGLMKGFVGLSGAVFTQIYLAIYGNDAKSMILLIAWLPALVSL 198 (594)
Q Consensus 121 ~l~~~r~l~G~g~g~~~~~~~~~i~~~fp--~~rg~~~gi~~~~~glg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~l 198 (594)
.+++..++.+++......+-.+...++.+ ++|.+..++-..+..+|+.+++.+.. |+...
T Consensus 111 ~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~-----------------pl~~~- 172 (444)
T PRK09669 111 YACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIAL-----------------PLVDI- 172 (444)
T ss_pred HHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------HHHHH-
Confidence 55555666666665666666677788774 56888888876666666666543221 11110
Q ss_pred HHHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHHhhhhcchhhhhhhhhhhhc
Q 007665 199 VFVYTIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCIFVFLPLFIAFREEFAAWQQ 278 (594)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (594)
.. ..+...+|+..+..+..+ ..+..+ .+ .+..+|+.
T Consensus 173 -----~~--~~~~~~g~~~~~~i~~ii---~~v~~~--------------------------~~---~~~~~e~~----- 208 (444)
T PRK09669 173 -----LG--KGDEQKGYFYAMMVMGLL---GVVLFF--------------------------CC---FFMTKERY----- 208 (444)
T ss_pred -----hC--CCchhhhHHHHHHHHHHH---HHHHHH--------------------------HH---hCCeEEec-----
Confidence 00 000112344333211111 000000 00 00011100
Q ss_pred CCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCCCCCccHHHhhchHHHHHHH
Q 007665 279 RKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKRGEDYGILQALLSIDMLILF 358 (594)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 358 (594)
+++ ++++.......++.+|||.++.+.
T Consensus 209 -----~~~------------------------------------------------~~~~~~~~~~~~~~~~n~~~~~l~ 235 (444)
T PRK09669 209 -----TPE------------------------------------------------VDNSSSVWKDLKLLLGNSQWRIMF 235 (444)
T ss_pred -----CCC------------------------------------------------CcCCCCHHHHHHHHhCCchHHHHH
Confidence 000 000001113457788999988876
Q ss_pred HHHHhhccccceeeccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHH-HH
Q 007665 359 LATFCGLGCSLTAIDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAV-GD 437 (594)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i-~~ 437 (594)
...++.............++.+..--++...+.+.....+..+++.+++++++||+++|+ ....+.++.++ +.
T Consensus 236 ~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~------~~~~~~~~~~~~~~ 309 (444)
T PRK09669 236 IFNVVLLTAVVTRGGATLYYVNYVLLRPDLATLFLVTGMIAGLFGALLSERLLGKFDRVR------AFKWTIVAFVILSA 309 (444)
T ss_pred HHHHHHHHHHHHHhhhhheeeeeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHH------HHHHHHHHHHHHHH
Confidence 654443222111111112222222112223344555667888889999999999998874 23333333332 22
Q ss_pred HHHhcc--CcchHHHHHHHHHHHhhhhHHHHHHHHHHhcc-------CCccccccchhhccchhhhhhhhhhHHHhhhhH
Q 007665 438 VLIAFP--KPGSVYVASLLVGFSYGAQLTLLFIIISELFG-------LKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDR 508 (594)
Q Consensus 438 ~~~~~~--~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~-------~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~ 508 (594)
.+.... +.+.+++..++.|++.+...+..+++++|..+ .+..|..+|..+....+|..+ |+.+.|.+++.
T Consensus 310 ~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~al-g~~i~g~ll~~ 388 (444)
T PRK09669 310 LIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAI-GGAVVGWILAW 388 (444)
T ss_pred HHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 222222 23345666788999999999999999998874 344566778888888999876 99999999876
No 106
>PRK09848 glucuronide transporter; Provisional
Probab=99.74 E-value=4.7e-16 Score=165.03 Aligned_cols=158 Identities=9% Similarity=0.048 Sum_probs=109.8
Q ss_pred cHHHhhchHHHHHHHHHHHhhccccceeeccHHHHHHh-cCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCc
Q 007665 344 GILQALLSIDMLILFLATFCGLGCSLTAIDNLGQIGES-LGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPR 422 (594)
Q Consensus 344 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~ 422 (594)
.+++++|||.++...+..++............+++.++ +|.++...++......++..++.++.+++.||+++|
T Consensus 220 ~~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~----- 294 (448)
T PRK09848 220 SLQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKK----- 294 (448)
T ss_pred HHHHHhCCchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH-----
Confidence 35678899999887766665544444444445666664 466554444444444667788899999999999876
Q ss_pred hHHHHHHHHHHHHHHHHHhccC---cchHHHHHHHHHHHhhhhHHHHHHHHHHhccC-------Cccccccchhhccchh
Q 007665 423 PLIMAISLILSAVGDVLIAFPK---PGSVYVASLLVGFSYGAQLTLLFIIISELFGL-------KYYSTLFNCGQLASPL 492 (594)
Q Consensus 423 ~~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~-------~~~g~~~g~~~~~~~l 492 (594)
..+.++.++.+++.+.+.... .+..++..++.|+|.+...+...++.+|..+. ++.|..+|+.+....+
T Consensus 295 -~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~kl 373 (448)
T PRK09848 295 -NTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKC 373 (448)
T ss_pred -HHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHH
Confidence 345566666666655544322 23344556778899888888888888887753 3568899999999999
Q ss_pred hhhhhhhhHHHhhhhH
Q 007665 493 GSYVLNVIVVGRLYDR 508 (594)
Q Consensus 493 g~~~~gp~~~g~l~~~ 508 (594)
|..+ |+.+.|.+.+.
T Consensus 374 g~ai-g~~i~g~~l~~ 388 (448)
T PRK09848 374 GQAI-GGSIPAFILGL 388 (448)
T ss_pred HHHH-HHHHHHHHHHH
Confidence 9976 88899888765
No 107
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.73 E-value=7.2e-15 Score=151.57 Aligned_cols=189 Identities=20% Similarity=0.183 Sum_probs=138.1
Q ss_pred HHHhhchHHHHHHHHHHHhhccccceeeccHHHHHHhcC-CCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCch
Q 007665 345 ILQALLSIDMLILFLATFCGLGCSLTAIDNLGQIGESLG-YPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRP 423 (594)
Q Consensus 345 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~ 423 (594)
..+++|+|.+..+.+..++..........+.+.++++.| ++....+...++..++.++.-...+++..|+|.|
T Consensus 200 ~~~llk~~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~------ 273 (400)
T PF03825_consen 200 ALKLLKNPRFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIK------ 273 (400)
T ss_pred HHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH------
Confidence 367899999988777766665555555566778889987 7777788888888888888888888888887665
Q ss_pred HHHHHHHHHHHHHHHHHhcc-Ccc-hHHHHH----HHHHHHhhhhHHHHHHHHHHhccCCccccccchhhc-cchhhhhh
Q 007665 424 LIMAISLILSAVGDVLIAFP-KPG-SVYVAS----LLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQL-ASPLGSYV 496 (594)
Q Consensus 424 ~~~~~~~~~~~i~~~~~~~~-~~~-~~~~~~----~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~-~~~lg~~~ 496 (594)
.++.++.+..++=..++... ++. ..++.. .+.|+.++..+.....++.+..|++.+++++++.+. ..++|+.+
T Consensus 274 ~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~i 353 (400)
T PF03825_consen 274 WLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAI 353 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHH
Confidence 56777777777766666544 332 223222 458999999999999999999999999999999865 46888876
Q ss_pred hhhhHHHhhhhHHHHHhhhhhhcccccCCCcccccccchHHHHHHHHHHHHHHHHHHHHHHh
Q 007665 497 LNVIVVGRLYDREAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFILVM 558 (594)
Q Consensus 497 ~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 558 (594)
|..+.|+++|....+. ...|...+.+.+++.++..++.+.+.+
T Consensus 354 -G~~igG~l~~~~g~~~------------------~~~~~~~~~v~a~~~~~~~~~f~~~fk 396 (400)
T PF03825_consen 354 -GSLIGGWLYDAFGARG------------------MFDWSAVFLVFAVMALVILVLFVILFK 396 (400)
T ss_pred -HHHHHHHHHHHhcchh------------------hhhHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 9999999999842221 134556666666665555555554433
No 108
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.73 E-value=7.4e-16 Score=154.35 Aligned_cols=277 Identities=13% Similarity=0.073 Sum_probs=183.4
Q ss_pred hhHHHHHHHHHHHhhhhhhhhhhhHhHHhhcCC-CceeehhHHHHHhhhhHHHHHHHHHHHHhCCChHHHHHHHHHHHHH
Q 007665 117 PKVWQMCLYICIGANSQNFANTGSLVTCVKNFP-ESRGMMLGLMKGFVGLSGAVFTQIYLAIYGNDAKSMILLIAWLPAL 195 (594)
Q Consensus 117 ~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp-~~rg~~~gi~~~~~glg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~ 195 (594)
.+|..+++.-++.|.|.+...+.+..++++..| +++.+.+++.++.+++|..++|.+.+.+........
T Consensus 8 ~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~---------- 77 (310)
T TIGR01272 8 RYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDL---------- 77 (310)
T ss_pred hHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcch----------
Confidence 578899999999999999999999999999986 578999999999999999999888776542210000
Q ss_pred HHHHHHHHhccCCC--CCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHHhhhhcchhhhhhhh
Q 007665 196 VSLVFVYTIRPLKV--SSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCIFVFLPLFIAFREEF 273 (594)
Q Consensus 196 ~~l~~~~~~~~~~~--~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (594)
...... ....+|+.+|. .++....+..+.+ ...+ .
T Consensus 78 --------~~~~~~~~~~~~~~~~~yl---~ia~~~~~~~i~~------------------------------~~~~-~- 114 (310)
T TIGR01272 78 --------SMQVATANAEAAKVHTPYL---LLAGALAVLAIIF------------------------------AFLP-L- 114 (310)
T ss_pred --------hhhhhhhhHHHHHHHHHHH---HHHHHHHHHHHHH------------------------------HHcc-C-
Confidence 000000 00024455544 2211111111000 0000 0
Q ss_pred hhhhcCCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCCCCCccHHHhhchHH
Q 007665 274 AAWQQRKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKRGEDYGILQALLSID 353 (594)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 353 (594)
++. +++ + +++ ..+++. ...++.+|+|.
T Consensus 115 -----p~~--~~~------~------------------------------~~~------~~~~~~----~~~~~~~~~~~ 141 (310)
T TIGR01272 115 -----PEL--QEA------D------------------------------VAR------VSSGDT----TQKTSAFQFTH 141 (310)
T ss_pred -----CCC--Ccc------c------------------------------ccc------cccccc----cchhhHHhhHH
Confidence 000 000 0 000 000000 01134677888
Q ss_pred HHHHHHHHHhhccccceeeccHHHHHHh---cCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHH
Q 007665 354 MLILFLATFCGLGCSLTAIDNLGQIGES---LGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISL 430 (594)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~ 430 (594)
+++..+..++..+.......|++.|+.+ .|+++.+++...+.+..+.++||++.+++.||+++|+ .+.++.
T Consensus 142 ~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~------~l~~~~ 215 (310)
T TIGR01272 142 LVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGR------YLAFNA 215 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHH------HHHHHH
Confidence 8888888888888888888899999874 4899999999999999999999999999999998763 344555
Q ss_pred HHHHHHHHHHhccCcchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhH
Q 007665 431 ILSAVGDVLIAFPKPGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDR 508 (594)
Q Consensus 431 ~~~~i~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~ 508 (594)
++.+++.++....+.........+.|++.+..+|...+...+.+| ++.+++.++. ....+|+.+ .|++.|.+.|.
T Consensus 216 ~l~~~~~~l~~~~~~~~~~~~~~l~g~~~s~i~P~~~s~a~~~~~-~~~~~asai~-~~~~~Gg~i-~P~l~G~lad~ 290 (310)
T TIGR01272 216 FLAVLLSIGAALTHGYVAMWFVLALGLFNSIMFPTIFSLALNALG-RHTSQGSGIL-CLAIVGGAI-VPLLQGSLADC 290 (310)
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-hhhhhhHHHH-HHHHhcchH-HHHHHHHHHHh
Confidence 555555444433333333345668899999999999988888887 4567777775 566688876 89999999997
No 109
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.72 E-value=8.1e-15 Score=153.09 Aligned_cols=388 Identities=13% Similarity=0.006 Sum_probs=211.6
Q ss_pred HHHHHHHhCCCHhHHHHHH-HHHhhhhhhhhhhhhhhc----ccCchHHHHHH-HHHHHHHHHHHHHHHhh--cc-----
Q 007665 48 SKEIKSTLGYDQTTLNLLS-TCKDLGANVGVLSGLLAE----VTPPWLVLLVG-SAMNFGGYFMIWLAVMK--KI----- 114 (594)
Q Consensus 48 ~~~l~~~~~~s~~~~~~~~-~~~~~~~~~~~~~G~l~D----r~G~r~v~~~g-~~l~~ig~~l~~~a~~~--~~----- 114 (594)
.+.+.+++|.+..+.+++. .....+.+.+|+.|.++| |+|||+.++++ .+...++..+.+++-.. ..
T Consensus 27 l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~ 106 (477)
T TIGR01301 27 LTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHLFGDNLD 106 (477)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhhcccccc
Confidence 4446688999999999954 444555577999999999 59999998875 44555554444332100 00
Q ss_pred -CChhH--HHHHHHHHHHhhhhhhhhhhhHhHHhhcCCC-ce--eehhHHHHHhhhhHHHHHHHHHHHHhCCChHHHHHH
Q 007665 115 -AKPKV--WQMCLYICIGANSQNFANTGSLVTCVKNFPE-SR--GMMLGLMKGFVGLSGAVFTQIYLAIYGNDAKSMILL 188 (594)
Q Consensus 115 -~~~~~--~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp~-~r--g~~~gi~~~~~glg~~i~~~l~~~l~~~~~~~~~~~ 188 (594)
.+... +.+++.-.+..++.....++..+++.|.+|+ +| +.+.++.....++|+.+++.+.+......
T Consensus 107 ~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~------- 179 (477)
T TIGR01301 107 KKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYK------- 179 (477)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH-------
Confidence 00011 2223333445567777778888999999974 33 68999988888899888775554310000
Q ss_pred HHHHHHHHHHHHHHHhccCCCCC--CCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHHhhhhcch
Q 007665 189 IAWLPALVSLVFVYTIRPLKVSS--HPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCIFVFLPLF 266 (594)
Q Consensus 189 ~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (594)
..| +.. ..+.. ..+-+..|. ++.+..+.. .+...
T Consensus 180 --~~~---------~~~-~~~~~~~~~~~~~~F~----i~a~~l~i~----------------------------~l~t~ 215 (477)
T TIGR01301 180 --IFP---------FTK-TEACGVSCANLKSCFL----IDIILLAIL----------------------------TYIAL 215 (477)
T ss_pred --hcc---------ccc-ccccccccchHHHHHH----HHHHHHHHH----------------------------HHHHe
Confidence 000 000 00000 012233333 111110000 01111
Q ss_pred hhhhhhhhhhhcCCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCCCCCccHH
Q 007665 267 IAFREEFAAWQQRKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKRGEDYGIL 346 (594)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (594)
+..+|++.. +++ + . + +.+ . .+.++......++
T Consensus 216 ~~v~E~~~~--------~~~------~-----------------~--~---~~~---~---------~~~~~~~~~~~~~ 247 (477)
T TIGR01301 216 SAVKENPLI--------GSD------D-----------------F--I---NSE---A---------APPSKHGEEAFFG 247 (477)
T ss_pred eeeeccCCC--------ccc------c-----------------c--h---hhh---c---------ccccccchhhhHH
Confidence 112221000 000 0 0 0 000 0 0000000001122
Q ss_pred Hhhc-----hHHHHHHHHHHHhhccccceeeccHHHHHH-h-cCCCCCc------c---h-hhHHHHhhhhhHhhhhhcc
Q 007665 347 QALL-----SIDMLILFLATFCGLGCSLTAIDNLGQIGE-S-LGYPQHT------I---N-TFVSLVSIWNYFGRVFAGF 409 (594)
Q Consensus 347 ~~l~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~g~s~~~------a---~-~~~~~~~i~~~~g~~~~g~ 409 (594)
+.++ .+.+|.+.+..++.+...+.+..+.+++.. + .+-++.. + + +.....++.+.+..++..+
T Consensus 248 ~i~~~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~ 327 (477)
T TIGR01301 248 ELFGAFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEK 327 (477)
T ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3332 356788888888877766666655555543 2 2322211 1 1 2233444444455555555
Q ss_pred ccHHHhhhccCCchHHHHHHHHHHHHHHHHHhccC----------------------cchHHHHHHHHHHHhhhhHHHHH
Q 007665 410 VSEIILLKYKVPRPLIMAISLILSAVGDVLIAFPK----------------------PGSVYVASLLVGFSYGAQLTLLF 467 (594)
Q Consensus 410 l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~~~----------------------~~~~~~~~~l~G~~~g~~~~~~~ 467 (594)
+.+|+|+| +....++.++.++++....+.+ .+...+...++|+..+.....-+
T Consensus 328 l~~~~g~~-----k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPf 402 (477)
T TIGR01301 328 LCRGWGAG-----KRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPF 402 (477)
T ss_pred HHHHhccc-----hhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhH
Confidence 55666532 2344555555555544332111 13455667889999999999999
Q ss_pred HHHHHhccC--CccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhhcccccCCCcccccccchHHHHHHHHHH
Q 007665 468 IIISELFGL--KYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGV 545 (594)
Q Consensus 468 ~~~~~~~~~--~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~ 545 (594)
+++++..+. ++.|..+|+.|.+..+...+ ..+..|.+.+.. .++...++.+.++.
T Consensus 403 al~s~~~~~~~~~~G~~mgilN~~I~lpQii-~sl~~g~~~~~~----------------------g~~~~~~~~~~gv~ 459 (477)
T TIGR01301 403 ALASIRSSNLGAGQGLSMGVLNLAIVIPQII-VSLGSGPWDQLF----------------------GGGNLPAFVVGAVA 459 (477)
T ss_pred HHHHHHccccCCCCcchhhHHHHHHHHHHHH-HHHHHHHHHHHc----------------------CCCCeeHHHHHHHH
Confidence 999999984 56799999999999998876 565677744431 02456788888888
Q ss_pred HHHHHHHHHHHHhhhhh
Q 007665 546 NIFGALITFILVMRTRR 562 (594)
Q Consensus 546 ~~~~~~~~~~~~~~~~~ 562 (594)
.+++++.++++.++.++
T Consensus 460 ~~~aa~~~~~~~~~~~~ 476 (477)
T TIGR01301 460 AFVSGLLALILLPRPRV 476 (477)
T ss_pred HHHHHHHHHHhCCCCCC
Confidence 88998888887776543
No 110
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.71 E-value=2.1e-15 Score=152.71 Aligned_cols=188 Identities=17% Similarity=0.220 Sum_probs=139.2
Q ss_pred cHHHhhchHHHHHHHHHHHhhccccceeeccHHHHHHhc----CCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhcc
Q 007665 344 GILQALLSIDMLILFLATFCGLGCSLTAIDNLGQIGESL----GYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYK 419 (594)
Q Consensus 344 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~ 419 (594)
...+++|+|++|.+.+........+..+-...+.|++++ +.+....|.+.++-.+..++...+.+++.+|+|.|+
T Consensus 212 ~~~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~- 290 (412)
T PF01306_consen 212 DVLSLFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKN- 290 (412)
T ss_dssp HHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH-
T ss_pred HHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHh-
Confidence 356889999999877765544444444444456666543 334455677888889999999999999999999884
Q ss_pred CCchHHHHHHHHHHHHHHHHHhccC-cchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchh-hccchhhhhhh
Q 007665 420 VPRPLIMAISLILSAVGDVLIAFPK-PGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCG-QLASPLGSYVL 497 (594)
Q Consensus 420 ~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~-~~~~~lg~~~~ 497 (594)
.+.++.+++++=.......+ ++.+.+.-.+.++-.+.......-++.+.+|+|..++.+.+. +...+++..++
T Consensus 291 -----~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~ 365 (412)
T PF01306_consen 291 -----LLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIIL 365 (412)
T ss_dssp -----HHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHH
T ss_pred -----HHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHH
Confidence 45566566666666666544 456666778889888888888889999999999999999886 67889998874
Q ss_pred hhhHHHhhhhHHHHHhhhhhhcccccCCCcccccccchHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 007665 498 NVIVVGRLYDREAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFILVMRTRR 562 (594)
Q Consensus 498 gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 562 (594)
+.+.|.++|+ .+++.+|++++++.++..+++.+..++.++
T Consensus 366 -s~~~G~lyd~------------------------~G~~~tylimg~iv~~~~li~~f~l~~~~~ 405 (412)
T PF01306_consen 366 -SPLAGYLYDR------------------------IGFQHTYLIMGLIVLPFTLISAFTLKKDKK 405 (412)
T ss_dssp -HHHHHHHHHH------------------------HHHHHHHHHHHHHHHHHHHHHHHHS--SSS
T ss_pred -hhhHHhhHhh------------------------cCcHHHHHHHHHHHHHHHHHheeeecCCCc
Confidence 6699999999 679999999999888888888777655544
No 111
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.70 E-value=6.1e-14 Score=147.15 Aligned_cols=156 Identities=13% Similarity=0.046 Sum_probs=109.1
Q ss_pred hhhchhhhHHH-HHHHhCCCHhHHHHHHHHHhhh-hhhhhhhhhhhccc-CchHHHHHHHHHHHHHHHHHHHHHhhccCC
Q 007665 40 ATYLFGTYSKE-IKSTLGYDQTTLNLLSTCKDLG-ANVGVLSGLLAEVT-PPWLVLLVGSAMNFGGYFMIWLAVMKKIAK 116 (594)
Q Consensus 40 ~~~~~~~~~~~-l~~~~~~s~~~~~~~~~~~~~~-~~~~~~~G~l~Dr~-G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~ 116 (594)
..|.+..+.|. +++++|+++.+.+.+...+... .+..+++|+++||+ |||+++++|.++..++.++++.. .
T Consensus 24 s~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~--~---- 97 (493)
T PRK15462 24 SFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGAS--E---- 97 (493)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHh--h----
Confidence 44445444444 4678999999999955554444 45677999999999 99999999999999987655321 0
Q ss_pred hhHHHHHHHHHHHhhhhhhhhhhhHhHHhhcCCC---ceeehhHHHHHhhhhHHHHHHHHHHHHhCCChHHHHHHHHHHH
Q 007665 117 PKVWQMCLYICIGANSQNFANTGSLVTCVKNFPE---SRGMMLGLMKGFVGLSGAVFTQIYLAIYGNDAKSMILLIAWLP 193 (594)
Q Consensus 117 ~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp~---~rg~~~gi~~~~~glg~~i~~~l~~~l~~~~~~~~~~~~~~~~ 193 (594)
.+...+.+...+.++|.|...+...+++.|.||+ +|..+.++...+..+|+.++|.+.+.+.+..+|++.+.++...
T Consensus 98 ~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaig 177 (493)
T PRK15462 98 IHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVG 177 (493)
T ss_pred cchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHH
Confidence 1112233333344455666666666788999973 5888999988888899999999999888776777766666544
Q ss_pred HHHHHHHH
Q 007665 194 ALVSLVFV 201 (594)
Q Consensus 194 ~~~~l~~~ 201 (594)
.+..++..
T Consensus 178 m~l~li~~ 185 (493)
T PRK15462 178 MIAGLVIF 185 (493)
T ss_pred HHHHHHHH
Confidence 44444433
No 112
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.67 E-value=2.1e-15 Score=158.93 Aligned_cols=341 Identities=15% Similarity=0.125 Sum_probs=215.8
Q ss_pred hhHHHHHHHhCCCHhHHHHH-HHHHhhhhhhhhhhhhhhc----ccCchHHH-HHHHHHHHHHHHHHHHH-HhhccCChh
Q 007665 46 TYSKEIKSTLGYDQTTLNLL-STCKDLGANVGVLSGLLAE----VTPPWLVL-LVGSAMNFGGYFMIWLA-VMKKIAKPK 118 (594)
Q Consensus 46 ~~~~~l~~~~~~s~~~~~~~-~~~~~~~~~~~~~~G~l~D----r~G~r~v~-~~g~~l~~ig~~l~~~a-~~~~~~~~~ 118 (594)
.+.+.+.+.+|++...++.+ ...-...++..|+.|.++| |+||||.+ ++|.++.+++..+++.. ..+......
T Consensus 23 ~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~ 102 (428)
T PF13347_consen 23 YLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAK 102 (428)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhH
Confidence 44566788899999999994 4445556677999999999 89977654 46778888887776533 111111112
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhHhHHhhcCC--CceeehhHHHHHhhhhHHHHHHHHHHHHhCCChHHHHHHHHHHHHHH
Q 007665 119 VWQMCLYICIGANSQNFANTGSLVTCVKNFP--ESRGMMLGLMKGFVGLSGAVFTQIYLAIYGNDAKSMILLIAWLPALV 196 (594)
Q Consensus 119 ~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp--~~rg~~~gi~~~~~glg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~ 196 (594)
...+++..++..++..+...+..+...+..+ ++|.+..+.-..+..+|..+.+.+...+.
T Consensus 103 ~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~------------------ 164 (428)
T PF13347_consen 103 LVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILV------------------ 164 (428)
T ss_pred HHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhh------------------
Confidence 3344566666688888888887888889885 46999888877766666654443322111
Q ss_pred HHHHHHHhccCCCCCC-CchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHHhhhhcchhhhhhhhhh
Q 007665 197 SLVFVYTIRPLKVSSH-PNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCIFVFLPLFIAFREEFAA 275 (594)
Q Consensus 197 ~l~~~~~~~~~~~~~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (594)
........ .+|+.... ..+++..+..+ ......||+
T Consensus 165 --------~~~g~~~~~~~~~~~~~---v~~iv~~v~~~-----------------------------i~~~~~ke~--- 201 (428)
T PF13347_consen 165 --------SWFGGGDTSNGYRWMAL---VLAIVGLVFFL-----------------------------ITFFFVKER--- 201 (428)
T ss_pred --------hhhccCccchHHHHHHH---HHHHHHHHHhh-----------------------------hhhheeeec---
Confidence 00000000 13333322 11111100000 000111110
Q ss_pred hhcCCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCCCCCccHHHhhchHHHH
Q 007665 276 WQQRKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKRGEDYGILQALLSIDML 355 (594)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 355 (594)
+. + . ..++++.+.....++.++||.++
T Consensus 202 ---------~~------~------------------------~--------------~~~~~~~~~~~~~~~~~~nr~~~ 228 (428)
T PF13347_consen 202 ---------SV------E------------------------V--------------TEQEKKISLRDSLRSLFRNRPFR 228 (428)
T ss_pred ---------cc------c------------------------c--------------cccccccccccchhhhcccchHH
Confidence 00 0 0 00111111223457888999998
Q ss_pred HHHHHHHhhccccceeeccHHHHHHhc-CCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHH
Q 007665 356 ILFLATFCGLGCSLTAIDNLGQIGESL-GYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSA 434 (594)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 434 (594)
.+....++............+++.+.. |.+ ...+.+..+..++..++.+++++++||+|+|+ .+..+.++.+
T Consensus 229 ~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~------~~~~~~~~~~ 301 (428)
T PF13347_consen 229 ILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKK------VYIIGLLLAA 301 (428)
T ss_pred HHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHcccee------ehhhhHHHHH
Confidence 888877776555555555566777754 544 55677778889999999999999999999874 3455555555
Q ss_pred HHHHHHhc---cCcchHHHHHHHHHHHhhhhHHHHHHHHHHhcc-------CCccccccchhhccchhhhhhhhhhHHHh
Q 007665 435 VGDVLIAF---PKPGSVYVASLLVGFSYGAQLTLLFIIISELFG-------LKYYSTLFNCGQLASPLGSYVLNVIVVGR 504 (594)
Q Consensus 435 i~~~~~~~---~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~-------~~~~g~~~g~~~~~~~lg~~~~gp~~~g~ 504 (594)
++.+++.. .+.+..++..++.|++.+..+....++.+|+.+ .++.|..+|+.+....++..+ ++.+.|.
T Consensus 302 ~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~l-a~~i~g~ 380 (428)
T PF13347_consen 302 LGFLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGL-AGAIVGL 380 (428)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHH-HHHHHHH
Confidence 55554432 245677788899999999999888899888876 355788888888899998876 8888888
Q ss_pred hhhH
Q 007665 505 LYDR 508 (594)
Q Consensus 505 l~~~ 508 (594)
+.+.
T Consensus 381 ~l~~ 384 (428)
T PF13347_consen 381 LLAL 384 (428)
T ss_pred HHHH
Confidence 8765
No 113
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.62 E-value=7.4e-15 Score=145.33 Aligned_cols=185 Identities=18% Similarity=0.197 Sum_probs=141.0
Q ss_pred cHHHhhchHHHHHHHHHHHhhccccceeeccHHHHHH-hcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCc
Q 007665 344 GILQALLSIDMLILFLATFCGLGCSLTAIDNLGQIGE-SLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPR 422 (594)
Q Consensus 344 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~ 422 (594)
++++..+++++..+.++.++..-....++.....+.. ++|++..+..++....++..++|.++.|++.||++.|.
T Consensus 244 t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~---- 319 (438)
T COG2270 244 TFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKP---- 319 (438)
T ss_pred HHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCce----
Confidence 4566666676666666655554444455555556666 67999998888889999999999999999999998773
Q ss_pred hHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHH
Q 007665 423 PLIMAISLILSAVGDVLIAFPKPGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVV 502 (594)
Q Consensus 423 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~ 502 (594)
.++....++..+++..+....+..+++...++|+..|..++..=++..+.+|+++-++.+|+.++....++++ ||.+.
T Consensus 320 -vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~-gp~lv 397 (438)
T COG2270 320 -VLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFL-GPFLV 397 (438)
T ss_pred -eehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHH-HHHHH
Confidence 2333333334444444444445667777899999999999999999999999999999999999999999975 99999
Q ss_pred HhhhhHHHHHhhhhhhcccccCCCcccccccchHHHHHHHHHHHHHHHHHHHHHH
Q 007665 503 GRLYDREAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFILV 557 (594)
Q Consensus 503 g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 557 (594)
+.+.+. +++-|..+....++.+++.+....++
T Consensus 398 ~v~t~i-----------------------Tg~~r~g~~~i~vll~iGl~~L~~v~ 429 (438)
T COG2270 398 AVITQI-----------------------TGSSRAGVLSIIVLLLIGLLLLLRVK 429 (438)
T ss_pred HHHHHH-----------------------hcchhhHHHHHHHHHHhhHhhEEeec
Confidence 999988 46677777777777777776555444
No 114
>PRK11462 putative transporter; Provisional
Probab=99.62 E-value=2.4e-13 Score=144.09 Aligned_cols=124 Identities=11% Similarity=-0.067 Sum_probs=82.6
Q ss_pred hHHHHHHHhCCCHhHHHHH-HHHHhhhhhhhhhhhhhhcc----cCchHHH-HHHHHHHHHHHHHHHHHHhhccCChhHH
Q 007665 47 YSKEIKSTLGYDQTTLNLL-STCKDLGANVGVLSGLLAEV----TPPWLVL-LVGSAMNFGGYFMIWLAVMKKIAKPKVW 120 (594)
Q Consensus 47 ~~~~l~~~~~~s~~~~~~~-~~~~~~~~~~~~~~G~l~Dr----~G~r~v~-~~g~~l~~ig~~l~~~a~~~~~~~~~~~ 120 (594)
+...+.+.+|++...++++ ...-..-++.-|+.|.++|| +||||.+ ++|.+.+.++..+++... ....+..+.
T Consensus 32 l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p-~~s~~~~~~ 110 (460)
T PRK11462 32 MMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTP-DLSMNGKMI 110 (460)
T ss_pred HHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCC-CCCcchHHH
Confidence 3445678899999999994 44445556779999999996 6887554 456677777766654321 111111133
Q ss_pred HHHHHHHHHhhhhhhhhhhhHhHHhhcCC--CceeehhHHHHHhhhhHHHHHH
Q 007665 121 QMCLYICIGANSQNFANTGSLVTCVKNFP--ESRGMMLGLMKGFVGLSGAVFT 171 (594)
Q Consensus 121 ~l~~~r~l~G~g~g~~~~~~~~~i~~~fp--~~rg~~~gi~~~~~glg~~i~~ 171 (594)
.+++..++..++..+...+-.++..+.-+ ++|.+..++-..+..+|..+++
T Consensus 111 y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~ 163 (460)
T PRK11462 111 YAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLST 163 (460)
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455566677777777666677777664 5799999987777666666654
No 115
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.59 E-value=1.9e-12 Score=128.87 Aligned_cols=373 Identities=16% Similarity=0.102 Sum_probs=233.6
Q ss_pred HHHHHHHhCCCHhHHHHHHHHHhhhhhhhhhhhhhhcccC-----chHHH-HHHHHHHHHHHHHHHHHHhhccC------
Q 007665 48 SKEIKSTLGYDQTTLNLLSTCKDLGANVGVLSGLLAEVTP-----PWLVL-LVGSAMNFGGYFMIWLAVMKKIA------ 115 (594)
Q Consensus 48 ~~~l~~~~~~s~~~~~~~~~~~~~~~~~~~~~G~l~Dr~G-----~r~v~-~~g~~l~~ig~~l~~~a~~~~~~------ 115 (594)
+-.+..|++++..-.+.+.....+...+.+..|..+|+.+ ||..+ ..|.+++..+..+...+..-...
T Consensus 3 NRVMIvEL~vpA~lv~~lval~~~~ap~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~ 82 (403)
T PF03209_consen 3 NRVMIVELGVPAWLVALLVALHYLVAPLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSS 82 (403)
T ss_pred chhHHHHhccHHHHHHHHHHHHHHHHHHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccc
Confidence 3456788999998888866665666667999999999999 77554 45556666665555444322222
Q ss_pred -ChhHHHH--HHHHHHHhhhhhhhhhhhHhHHhhcCC-CceeehhHHHHHhhhhHHHHHHHHHHHHhCCChH-HHHHHHH
Q 007665 116 -KPKVWQM--CLYICIGANSQNFANTGSLVTCVKNFP-ESRGMMLGLMKGFVGLSGAVFTQIYLAIYGNDAK-SMILLIA 190 (594)
Q Consensus 116 -~~~~~~l--~~~r~l~G~g~g~~~~~~~~~i~~~fp-~~rg~~~gi~~~~~glg~~i~~~l~~~l~~~~~~-~~~~~~~ 190 (594)
+...+.. ...-.+.|+|.+...++-.+.+.|.-| ++|+++.+++....-+|.++.+.+.+.++++++. +..-.++
T Consensus 83 ~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~ 162 (403)
T PF03209_consen 83 GPFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQ 162 (403)
T ss_pred cccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHH
Confidence 1122322 235577899988888888899999996 6899999999888878888888777777765432 1111111
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHHhhhhcchhhhh
Q 007665 191 WLPALVSLVFVYTIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCIFVFLPLFIAFR 270 (594)
Q Consensus 191 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (594)
..+.+..++ .. + ...+
T Consensus 163 ~~a~i~~~l-----------------------------------~~----------------------------i-a~wg 178 (403)
T PF03209_consen 163 GVALIALLL-----------------------------------NL----------------------------I-ALWG 178 (403)
T ss_pred HHHHHHHHH-----------------------------------HH----------------------------H-HHHh
Confidence 111110000 00 0 0011
Q ss_pred hhhhhhhcCCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCCCCCccHHHhhc
Q 007665 271 EEFAAWQQRKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKRGEDYGILQALL 350 (594)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 350 (594)
.|++. ++. + +..++|+......+++...
T Consensus 179 ~E~r~---------~~~------------------------------~-------------~~~~~~~~~f~~a~~~~~~ 206 (403)
T PF03209_consen 179 QEPRR---------SRR------------------------------A-------------AAAERPRPPFREAWRQVWA 206 (403)
T ss_pred cccCC---------ccc------------------------------c-------------cCCCCCCccHHHHHHHHHh
Confidence 11000 000 0 0000111111234456666
Q ss_pred hHHHHHHHHHHHhhccccceeeccH-HHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHH
Q 007665 351 SIDMLILFLATFCGLGCSLTAIDNL-GQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAIS 429 (594)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~ 429 (594)
+|....++...++....+++=-..+ |+=-+.+|++..+...+......+..+|..+.|++..|-. .+......+
T Consensus 207 ~~~a~~f~~fl~l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~-----~~~~~a~~G 281 (403)
T PF03209_consen 207 SPQARRFFVFLFLGTLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRL-----GKKRTAALG 281 (403)
T ss_pred CCChhHHHHHHHHHHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-----CchHHHHHH
Confidence 6665555544444333222211112 2233457999999999999999999999999998876321 122345667
Q ss_pred HHHHHHHHHHHhc----cCcchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhh
Q 007665 430 LILSAVGDVLIAF----PKPGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRL 505 (594)
Q Consensus 430 ~~~~~i~~~~~~~----~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l 505 (594)
+..+++++.++.. .+++.+....+++|++.|......-+.+.+...+++.|...|.....+.++..+ +..+.|.+
T Consensus 282 ~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Gl-g~~~GG~~ 360 (403)
T PF03209_consen 282 CLLGALAFALIILAGPLGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGL-GTFLGGAL 360 (403)
T ss_pred HHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 7777776665432 235677778899999999888777888889999999999999999988888765 88888888
Q ss_pred hhHHHHHhhhhhhcccccCCCcccccccchHHHHHHHHHHHHHHHHHHHHH
Q 007665 506 YDREAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFIL 556 (594)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 556 (594)
.|....-.+ + ....+|...|.+=+++.++++.+...+
T Consensus 361 ~D~~~~~~~----------~----~~~~aY~~VF~lEa~ll~~a~~ll~~l 397 (403)
T PF03209_consen 361 RDLVRALFG----------N----SPALAYGVVFALEAVLLLAALVLLGRL 397 (403)
T ss_pred HHHHHHhcc----------C----CcchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 886322110 0 012568888888877777776655444
No 116
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.54 E-value=1e-12 Score=134.42 Aligned_cols=386 Identities=14% Similarity=0.094 Sum_probs=220.7
Q ss_pred hHHHHHHHhCCCHhHHHHHH-HHHhhhhhhhhhhhhhhcc----cCchH-HHHHHHHHHHHHHHHHHHHHhhccCChhHH
Q 007665 47 YSKEIKSTLGYDQTTLNLLS-TCKDLGANVGVLSGLLAEV----TPPWL-VLLVGSAMNFGGYFMIWLAVMKKIAKPKVW 120 (594)
Q Consensus 47 ~~~~l~~~~~~s~~~~~~~~-~~~~~~~~~~~~~G~l~Dr----~G~r~-v~~~g~~l~~ig~~l~~~a~~~~~~~~~~~ 120 (594)
+.-.+.+.+|++...++.+. ..=.+=++.-|+.|.+.|| +|||| -++.|.+-+++.+.+++.+.. .....+..
T Consensus 35 Ll~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~-~~~~~k~~ 113 (467)
T COG2211 35 LLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPD-FSMTGKLI 113 (467)
T ss_pred HHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCC-cccCcchH
Confidence 34456789999999999844 4444555679999999997 56654 566666777777777755421 11112344
Q ss_pred HHHHHHHHHhhhhhhhhhhhHhHHhhcC--CCceeehhHHHHHhhhhHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHH
Q 007665 121 QMCLYICIGANSQNFANTGSLVTCVKNF--PESRGMMLGLMKGFVGLSGAVFTQIYLAIYGNDAKSMILLIAWLPALVSL 198 (594)
Q Consensus 121 ~l~~~r~l~G~g~g~~~~~~~~~i~~~f--p~~rg~~~gi~~~~~glg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~l 198 (594)
..++-..+.+++...+..+-.+...+.- |++|.+..+.-..+..+|..+...+.. | +..+
T Consensus 114 ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~-----------------p-lv~~ 175 (467)
T COG2211 114 YALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFP-----------------P-LVKL 175 (467)
T ss_pred HHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------H-HHHH
Confidence 4556677778888877766667777766 467988888877766666555432221 1 1111
Q ss_pred HHHHHhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCccccchhhHHHHhhhhcchhhhhhhhhhhhc
Q 007665 199 VFVYTIRPLKVSSHPNELKVFYEYLYITISLALCLMGLTIAQKQAHFPHVGYIGSAIAVCIFVFLPLFIAFREEFAAWQQ 278 (594)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (594)
+ . +.+....|. ..+...++..++..+ ++ +.-.+|+.
T Consensus 176 ~-----g------~~~~~~g~~---~~~~~~~vi~~i~~l----------------------~~---~~~v~ER~----- 211 (467)
T COG2211 176 F-----G------GGDKALGYQ---GTALVLGVIGVILLL----------------------FC---FFNVKERV----- 211 (467)
T ss_pred h-----C------CCcchhhHH---HHHHHHHHHHHHHHH----------------------HH---HHHhhccc-----
Confidence 1 1 111122222 111111111111100 00 00011110
Q ss_pred CCCCCCCcccccccccchhhhhhhhhhhcccccccccccccCCCCCCCCCcCCCCCCCCCCCCCccHHHhhchHHHHHHH
Q 007665 279 RKQPTPASAVVIVFEQTTLVATKSEILEIESDHSQTLQTENKKQEPDQTPCCGNIFKPPKRGEDYGILQALLSIDMLILF 358 (594)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 358 (594)
.++ .+ .+...+......+...++|+.+..+.
T Consensus 212 -----~~~-------------------------------~~-------------~~~~~~~~~~~~~~~~~~Nrp~~~~l 242 (467)
T COG2211 212 -----VET-------------------------------QP-------------TKTGVKLKLKDSFLLIFKNRPLLLLL 242 (467)
T ss_pred -----Ccc-------------------------------cc-------------CcccccccHHHHHHHHHccchHHHHH
Confidence 000 00 00000111112334677888887777
Q ss_pred HHHHhhccccceeeccHHHHHH-hcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHH
Q 007665 359 LATFCGLGCSLTAIDNLGQIGE-SLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGD 437 (594)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~ 437 (594)
+.+.+.............+|.+ .+|.++......+.....+..++.++...+++|+|+| .++..+.++.+++.
T Consensus 243 ~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk------~~~~~~~~~~~i~~ 316 (467)
T COG2211 243 LMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKK------KLFLIGLLLLAVGY 316 (467)
T ss_pred HHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchH------HHHHHHHHHHHHHH
Confidence 7555544333222222334444 2466666666777788888888899999999999988 46677777777776
Q ss_pred HHHhccC---cchHHHHHHHHHHHhhhhHHHHHHHHHHhcc-------CCccccccchhhccchhhhhhhhhhHHHhhhh
Q 007665 438 VLIAFPK---PGSVYVASLLVGFSYGAQLTLLFIIISELFG-------LKYYSTLFNCGQLASPLGSYVLNVIVVGRLYD 507 (594)
Q Consensus 438 ~~~~~~~---~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~-------~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~ 507 (594)
+++.+.. ....++..++.+++.+...++.+++++|..+ .+.-|..++....+.-+|..+ +..+.|++.+
T Consensus 317 ~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~al-a~~~~g~~L~ 395 (467)
T COG2211 317 LLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLAL-AGFIPGWILG 395 (467)
T ss_pred HHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 6655433 2345555688889999988888888887765 456788888888888888876 6778888776
Q ss_pred HHHHHhhhhhhcccccCC-CcccccccchHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 007665 508 REAMKQLAEKGMTRAMVK-DLTCIGRQCYRLSFTILAGVNIFGALITFILVMRTR 561 (594)
Q Consensus 508 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~ 561 (594)
... ++... .++.....+.+..+.+.-++..+..+....+++-++
T Consensus 396 ~~G----------yv~~~~~Q~~~al~gI~~~~~~~Pa~l~l~~~i~~~~y~L~~ 440 (467)
T COG2211 396 AIG----------YVPNVSAQSASALFGIRFLFIILPALLLLLAAIIIFFYKLNE 440 (467)
T ss_pred HcC----------CCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCH
Confidence 531 11111 122222345666776664444433333333444443
No 117
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.41 E-value=3e-14 Score=151.96 Aligned_cols=385 Identities=14% Similarity=0.113 Sum_probs=3.0
Q ss_pred hhhHHHHHHHhCCCHhHHHHHHHHHhhhhh-hhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhccC--------
Q 007665 45 GTYSKEIKSTLGYDQTTLNLLSTCKDLGAN-VGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIA-------- 115 (594)
Q Consensus 45 ~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~-------- 115 (594)
+....+++++|+++.++.+++.+.+-++.+ ..++...+.+|..|-+.+-.|.+++++|++++++ -++..
T Consensus 23 ~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~l--Phf~~~~y~~~~~ 100 (539)
T PF03137_consen 23 NSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFAL--PHFLSGPYSYEEA 100 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhc--cHhhcCCCccccc
Confidence 455689999999999999998888888875 4778999999988888888999999999887643 11100
Q ss_pred ------------------------------------Ch-hHHHHHHHHHHHhhhhhhhhhhhHhHHhhcCC-CceeehhH
Q 007665 116 ------------------------------------KP-KVWQMCLYICIGANSQNFANTGSLVTCVKNFP-ESRGMMLG 157 (594)
Q Consensus 116 ------------------------------------~~-~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp-~~rg~~~g 157 (594)
.. -+..++++.++.|+|....++...+++-|..+ ++-+..+|
T Consensus 101 ~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiG 180 (539)
T PF03137_consen 101 SNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIG 180 (539)
T ss_dssp ---------------------------------------------------SSS--------------------------
T ss_pred cccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchh
Confidence 00 13445578899999999999999999999986 56789999
Q ss_pred HHHHhhhhHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHhccCCCC--------CCCchhHHHHHHHHHHHHH
Q 007665 158 LMKGFVGLSGAVFTQIYLAIYGNDAKSMILLIAWLPALVSLVFVYTIRPLKVS--------SHPNELKVFYEYLYITISL 229 (594)
Q Consensus 158 i~~~~~glg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--------~~~~~~~~f~~~~~~~~~~ 229 (594)
++.+...+|.+++=.+++..++-+ +...... ....|=.+||. +
T Consensus 181 i~~~~~~lGPa~Gf~lg~~~L~~y----------------------vD~~~~~~~~~~i~p~dp~WvGAWWL----G--- 231 (539)
T PF03137_consen 181 ILYAMSILGPALGFLLGSFCLRIY----------------------VDFPKVPPDGVGITPSDPRWVGAWWL----G--- 231 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hhhHHhhccHHHHHHHHHHHHhce----------------------eCCccccccCCCCCCCCccHHHHHHH----H---
Confidence 988888888777654444333211 1111100 01234444441 0
Q ss_pred HHHHHHHhhhhcccCCCCccccchhhHHHHhhhhcchhhhhhhhhhhhcCCCCCCCcccccccccchhhhhhhhhhhccc
Q 007665 230 ALCLMGLTIAQKQAHFPHVGYIGSAIAVCIFVFLPLFIAFREEFAAWQQRKQPTPASAVVIVFEQTTLVATKSEILEIES 309 (594)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (594)
+ .+...+.++..+|+..+-|+-++.. +.++..+.. +
T Consensus 232 ------f---------------li~g~~~~l~aipl~~FPk~lp~~~-~~~~~~~~~----------------------~ 267 (539)
T PF03137_consen 232 ------F---------------LICGILLFLSAIPLFFFPKKLPGTS-ERQEEKESS----------------------E 267 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ------H---------------HHHHHHHHHHHHHHHcCCccCCCcc-cccchhhhh----------------------h
Confidence 0 0111223334445544433221110 000000000 0
Q ss_pred ccccccccccCCCCCCCCCcCCCCCCCCCCCCCccHHHhhchHHHHHHHHHHHhhccccceeeccHHHHHHh-cCCCCCc
Q 007665 310 DHSQTLQTENKKQEPDQTPCCGNIFKPPKRGEDYGILQALLSIDMLILFLATFCGLGCSLTAIDNLGQIGES-LGYPQHT 388 (594)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~ 388 (594)
+.+++ ...++ .++++..+ ......+......+++++||.|....++..+.......+..+.|.|.|. .+.++.+
T Consensus 268 ~~~~~---~~~~~-~~~~~~~~-~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~ 342 (539)
T PF03137_consen 268 RKEED---SDKDS-FKDPKSKK-SFGKSIKDFPKALKRLLTNPVFMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQ 342 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cchhh---hhhhc-cccccccc-chhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH
Confidence 00000 00000 00000000 0000111123466899999999988888777777777788889999985 5999999
Q ss_pred chhhHHHHhh-hhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHH-HHHHhc------------cC-------c--
Q 007665 389 INTFVSLVSI-WNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVG-DVLIAF------------PK-------P-- 445 (594)
Q Consensus 389 a~~~~~~~~i-~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~-~~~~~~------------~~-------~-- 445 (594)
+.++..+..+ +.++|.+++|++..|+.-+.+-..++.+... ++..+. ...+.. .. .
T Consensus 343 A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~-~v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~ 421 (539)
T PF03137_consen 343 ASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVS-IVSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSC 421 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHH-HHHHHHHHHHHeecCCCCceeeecCccccccCCCCCC
Confidence 9998865544 7789999999999998544221111111111 111111 011000 00 0
Q ss_pred ---------------------------chHH---HHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhh
Q 007665 446 ---------------------------GSVY---VASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSY 495 (594)
Q Consensus 446 ---------------------------~~~~---~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ 495 (594)
..++ +..++.-+..+........++-+.+++++++.+.|+..+...+-+.
T Consensus 422 ~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~~~i~LR~V~~~~rs~AlGv~~~~~rllg~ 501 (539)
T PF03137_consen 422 NLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVPSTLITLRCVPPEQRSFALGVQWLIIRLLGF 501 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhcccchheeeeccCChhhcchhhhHHHHHHHhhcC
Confidence 0011 1112222222333334445667899999999999999988777677
Q ss_pred hhhhhHHHhhhhHHH
Q 007665 496 VLNVIVVGRLYDREA 510 (594)
Q Consensus 496 ~~gp~~~g~l~~~~~ 510 (594)
+-||.++|.+.|...
T Consensus 502 IPgPIifG~iiD~tC 516 (539)
T PF03137_consen 502 IPGPIIFGAIIDSTC 516 (539)
T ss_dssp ---------------
T ss_pred cchHHHHhHHHhhhh
Confidence 889999999999853
No 118
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.40 E-value=2e-10 Score=116.71 Aligned_cols=146 Identities=14% Similarity=0.095 Sum_probs=113.5
Q ss_pred hCCCHhHHHH-HHHHHhhhhhhhhhhhhhhccc-CchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHhhh
Q 007665 55 LGYDQTTLNL-LSTCKDLGANVGVLSGLLAEVT-PPWLVLLVGSAMNFGGYFMIWLAVMKKIAKPKVWQMCLYICIGANS 132 (594)
Q Consensus 55 ~~~s~~~~~~-~~~~~~~~~~~~~~~G~l~Dr~-G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~~~~~~l~~~r~l~G~g 132 (594)
+|+|+++..- ++.+..+-.....++|+++||+ |+|+++++|.++..+|.++.+.+ .. .+...+++.-++.++|
T Consensus 56 Lg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~--~~---~~~~gl~i~L~~I~iG 130 (498)
T COG3104 56 LGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAIS--SV---SGPGGLYIGLALIIVG 130 (498)
T ss_pred CCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhcc--cc---ccccHHHHHHHHHHhc
Confidence 4499988777 4555455556677999999997 99999999999999998887543 10 1345667777777799
Q ss_pred hhhhhhhhHhHHhhcCCC---ceeehhHHHHHhhhhHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHhc
Q 007665 133 QNFANTGSLVTCVKNFPE---SRGMMLGLMKGFVGLSGAVFTQIYLAIYGNDAKSMILLIAWLPALVSLVFVYTIR 205 (594)
Q Consensus 133 ~g~~~~~~~~~i~~~fp~---~rg~~~gi~~~~~glg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 205 (594)
.|..=+.....+.|.+|+ ||-...++...+..+|+.+.|.+..++.++..|..-+-.+.+-....++...+.|
T Consensus 131 ~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~ 206 (498)
T COG3104 131 TGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGR 206 (498)
T ss_pred cccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcc
Confidence 999999999999999963 4667777777777899999999998888888888877777777666666665555
No 119
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.37 E-value=2.8e-12 Score=127.02 Aligned_cols=176 Identities=20% Similarity=0.169 Sum_probs=141.5
Q ss_pred HHHHHHHHHhhccccceeeccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHH
Q 007665 354 MLILFLATFCGLGCSLTAIDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILS 433 (594)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 433 (594)
|..+++.+...+..=-.+....|.+.++.|+|..+.+.+.+.+.+...++.++.|.++||.+.| ..+..++++.
T Consensus 31 f~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr------~fm~~gLils 104 (448)
T COG2271 31 FLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPR------YFMAFGLILS 104 (448)
T ss_pred HHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCc------eeehHHHHHH
Confidence 3333343433333333344456788888889999999999999999999999999999999776 4678888888
Q ss_pred HHHHHHHhccCc-chHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHH--HhhhhHHH
Q 007665 434 AVGDVLIAFPKP-GSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVV--GRLYDREA 510 (594)
Q Consensus 434 ~i~~~~~~~~~~-~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~--g~l~~~~~ 510 (594)
++..+++.+.+. ..+.+..++.|+..|..+|.....+...|++++||+..++.++..++|+.+ .|++. +.+.++
T Consensus 105 ai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal-~~~~~~la~~~~~-- 181 (448)
T COG2271 105 AIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGAL-APLVALLAFFAFH-- 181 (448)
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccch-HHHHHHHHHHHhc--
Confidence 888888776553 456667789999999999999999999999999999999999999999987 57777 777766
Q ss_pred HHhhhhhhcccccCCCcccccccchHHHHHHHHHHHHHHHHHHHHHHhhh
Q 007665 511 MKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFILVMRT 560 (594)
Q Consensus 511 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 560 (594)
.+|+..|++-+++.++..+..+++.+.+
T Consensus 182 ----------------------~~w~~~f~~pgiiaiival~~~~~~rd~ 209 (448)
T COG2271 182 ----------------------GGWRAAFYFPGIIAIIVALILLFLLRDR 209 (448)
T ss_pred ----------------------cchhHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 6899999999998877777666665443
No 120
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.34 E-value=1.3e-11 Score=123.78 Aligned_cols=175 Identities=16% Similarity=0.169 Sum_probs=154.5
Q ss_pred HHHHHHHHHHhhccccceeeccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHH
Q 007665 353 DMLILFLATFCGLGCSLTAIDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLIL 432 (594)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 432 (594)
..+.+.++.|+....++.....+|++.+++++|...++...++|+.+..++.++...++||+.|| .++.....+
T Consensus 14 ~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr------~lLl~~l~l 87 (394)
T COG2814 14 ALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERR------RLLLGLLAL 87 (394)
T ss_pred HHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchH------HHHHHHHHH
Confidence 34556666777777788888899999999999999999999999999999999999999999877 467777778
Q ss_pred HHHHHHHHhccC-cchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHH
Q 007665 433 SAVGDVLIAFPK-PGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAM 511 (594)
Q Consensus 433 ~~i~~~~~~~~~-~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~ 511 (594)
.+++.++..... ...+.+.-++.|+..|..++....+..++.|+++++++.+++.++..++..+ |.++..++-|.
T Consensus 88 Fi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~-GvPLGt~ig~~--- 163 (394)
T COG2814 88 FIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVL-GVPLGTFLGQL--- 163 (394)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHH-hccHHHHHHHH---
Confidence 888888777654 4667788899999999999999999999999999999999999999999865 99999999888
Q ss_pred HhhhhhhcccccCCCcccccccchHHHHHHHHHHHHHHHHHHHHHHh
Q 007665 512 KQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFILVM 558 (594)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 558 (594)
.+||.+|.+.+++.+++.+..+...+
T Consensus 164 ---------------------~GWR~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 164 ---------------------FGWRATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred ---------------------hhHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 78999999999999999988887776
No 121
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.33 E-value=6.2e-12 Score=133.03 Aligned_cols=180 Identities=17% Similarity=0.112 Sum_probs=128.8
Q ss_pred chHHHHHHHHHHHhhccccceeeccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHH
Q 007665 350 LSIDMLILFLATFCGLGCSLTAIDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAIS 429 (594)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~ 429 (594)
+++.++...+.+.........+....|++. +.|+++.+.+...+++.++..++.++.|+++||++||+ .+..+
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~------~~~~~ 97 (438)
T TIGR00712 25 RWQVFLGIFFGYAAYYLVRKNFALAMPYLV-EQGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRV------FLPAG 97 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHhhhHHHH-HcCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCce------ehHHH
Confidence 344445444444444333333344455554 46999999999999999999999999999999999874 34455
Q ss_pred HHHHHHHHHHHhcc----C-cchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHh
Q 007665 430 LILSAVGDVLIAFP----K-PGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGR 504 (594)
Q Consensus 430 ~~~~~i~~~~~~~~----~-~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~ 504 (594)
.++.+++.++.... + ...+++..++.|++.+..++.....+.|.+|+++++++.|+.++...+++.+ +|.+.+.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~-~~~l~~~ 176 (438)
T TIGR00712 98 LILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGI-PPLLVLL 176 (438)
T ss_pred HHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHH-HHHHHHH
Confidence 55555555544322 1 1234455677888888888888888999999999999999999999998876 7767776
Q ss_pred hhhHHHHHhhhhhhcccccCCCcccccccchHHHHHHHHHHHHHHHHHHHHHHhhh
Q 007665 505 LYDREAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFILVMRT 560 (594)
Q Consensus 505 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 560 (594)
..+. ..+|+..|++.++++++..+..+++.++.
T Consensus 177 ~~~~-----------------------~~~w~~~f~~~~~~~~i~~~~~~~~~~~~ 209 (438)
T TIGR00712 177 GMAW-----------------------FNDWHAALYFPAICAIIVALFAFAMMRDT 209 (438)
T ss_pred HHHH-----------------------hhhhHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 5543 15799999999888888776666655443
No 122
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.33 E-value=4.5e-12 Score=133.87 Aligned_cols=175 Identities=16% Similarity=0.170 Sum_probs=132.9
Q ss_pred HHHHHHHHHHhhccccceeeccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHH
Q 007665 353 DMLILFLATFCGLGCSLTAIDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLIL 432 (594)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 432 (594)
.++...+.+++.......+....|.+.++.|+|+.+.+...+.+.++..+++++.|+++||+|+|+ .+.++.++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~------~~~~~~~~ 97 (434)
T PRK11663 24 ILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARY------FMGIGLIA 97 (434)
T ss_pred HHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCch------hHHHHHHH
Confidence 333344444444333334445678888899999999999999999999999999999999999873 55666666
Q ss_pred HHHHHHHHhccC-cchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHH
Q 007665 433 SAVGDVLIAFPK-PGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAM 511 (594)
Q Consensus 433 ~~i~~~~~~~~~-~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~ 511 (594)
..++.++....+ .+.+.+..++.|++.|..++....++.+.+++++++++.|+.+....+|+.+ +|.+.+.+.+.
T Consensus 98 ~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~-~~~~~~~l~~~--- 173 (434)
T PRK11663 98 TGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGAL-IPLVVGAIALH--- 173 (434)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHc---
Confidence 666666554443 3445555677888888888888899999999999999999999999999976 89899988876
Q ss_pred HhhhhhhcccccCCCcccccccchHHHHHHHHHHHHHHHHHHHHHHh
Q 007665 512 KQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFILVM 558 (594)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 558 (594)
.+|+..|++.++++++..+...+..+
T Consensus 174 ---------------------~gw~~~f~~~~i~~~~~~~~~~~~~~ 199 (434)
T PRK11663 174 ---------------------YGWRYGMMIAGIIAIVVGLFLCWRLR 199 (434)
T ss_pred ---------------------ccHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 57999999888776655444443333
No 123
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.32 E-value=1.6e-11 Score=127.49 Aligned_cols=161 Identities=14% Similarity=0.189 Sum_probs=130.6
Q ss_pred ceeeccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhccC-cch
Q 007665 369 LTAIDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAFPK-PGS 447 (594)
Q Consensus 369 ~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~ 447 (594)
.......|.+.++.|.|+.+.+...+.+.++..++.++.|+++||+|||+ .+..+.++.+++.++....+ .+.
T Consensus 22 ~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~------~~~~~~~~~~~~~~~~~~~~~~~~ 95 (385)
T TIGR00710 22 DMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRP------VLLLGLFIFALSSLGLALSNNIET 95 (385)
T ss_pred HHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChH------HHHHHHHHHHHHHHHHHHHccHHH
Confidence 34445678888899999999999999999999999999999999998873 45566666666666554433 355
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhhcccccCCCc
Q 007665 448 VYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGMTRAMVKDL 527 (594)
Q Consensus 448 ~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~ 527 (594)
+.+..++.|++.+...+....++.|.+|+++++++.|..+....++..+ +|.+.+.+.+.
T Consensus 96 ~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-g~~~~~~l~~~------------------- 155 (385)
T TIGR00710 96 LLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAV-APLLGGYILVW------------------- 155 (385)
T ss_pred HHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH-------------------
Confidence 6667789999999989999999999999999999999999999999875 89899888776
Q ss_pred ccccccchHHHHHHHHHHHHHHHHHHHHHHhhh
Q 007665 528 TCIGRQCYRLSFTILAGVNIFGALITFILVMRT 560 (594)
Q Consensus 528 ~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 560 (594)
.+|+..|++.+++.++..+......++.
T Consensus 156 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (385)
T TIGR00710 156 -----LSWHAIFAFLSLAGILLSALIFFILPET 183 (385)
T ss_pred -----cCHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 5799999988888777766665554443
No 124
>PRK10504 putative transporter; Provisional
Probab=99.30 E-value=1.3e-11 Score=131.90 Aligned_cols=177 Identities=15% Similarity=0.213 Sum_probs=141.2
Q ss_pred HHHHHHHHHHHhhccccceeeccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHH
Q 007665 352 IDMLILFLATFCGLGCSLTAIDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLI 431 (594)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 431 (594)
+.+|.+.+..++.......+...+|.+.+++|.++.+.+...+.+.++..++.++.|+++||+|||+ .+..+.+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~------~~~~~~~ 83 (471)
T PRK10504 10 WQLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRN------IFFTAIV 83 (471)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHH------HHHHHHH
Confidence 4567777777766655555666789999999999999999999999999999999999999999884 3445555
Q ss_pred HHHHHHHHHhccC-cchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHH
Q 007665 432 LSAVGDVLIAFPK-PGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREA 510 (594)
Q Consensus 432 ~~~i~~~~~~~~~-~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~ 510 (594)
+..++.+.....+ .+.+++..++.|++.+...+....++.|.+|++++++++|+......++..+ +|.+.|.+.+.
T Consensus 84 ~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-g~~~~g~l~~~-- 160 (471)
T PRK10504 84 LFTLGSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLL-GPALGGLLVEY-- 160 (471)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHhh--
Confidence 5555555444333 4556677889999999999999999999999999999999999999999875 99999999887
Q ss_pred HHhhhhhhcccccCCCcccccccchHHHHHHHHHHHHHHHHHHHHHHhh
Q 007665 511 MKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFILVMR 559 (594)
Q Consensus 511 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 559 (594)
.+|++.|.+...+++++.++.....++
T Consensus 161 ----------------------~gw~~~f~~~~~~~~l~~~~~~~~~~~ 187 (471)
T PRK10504 161 ----------------------ASWHWIFLINIPVGIIGAIATLMLMPN 187 (471)
T ss_pred ----------------------ccHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 579999999888877777666555443
No 125
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.30 E-value=6.8e-12 Score=128.39 Aligned_cols=156 Identities=22% Similarity=0.297 Sum_probs=128.3
Q ss_pred eccHH-HHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhc-cCcchHH
Q 007665 372 IDNLG-QIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAF-PKPGSVY 449 (594)
Q Consensus 372 ~~~~~-~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~ 449 (594)
...+| .+.++.|.++.+.++..+...++..++.++.|+++||+||| ..+..+.++.+++.++..+ .+.+.++
T Consensus 16 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r------~~l~~~~~~~~~~~~~~~~~~~~~~~~ 89 (352)
T PF07690_consen 16 SPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRR------RVLIIGLLLFALGSLLLAFASNFWLLL 89 (352)
T ss_dssp HHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HH------HHHHHHHHHHHHHHHHHHHHCCHHHHH
T ss_pred HHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCe------eeEeehhhhhhhHHHHhhhhhhHHHHh
Confidence 34456 56677899999999999999999999999999999999988 3666777777777444333 4445677
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhhcccccCCCccc
Q 007665 450 VASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGMTRAMVKDLTC 529 (594)
Q Consensus 450 ~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~ 529 (594)
+..++.|++.+...+....++.|.++++++++..|.......+|..+ +|.+.+.+.+.
T Consensus 90 ~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~-g~~l~~~l~~~--------------------- 147 (352)
T PF07690_consen 90 IARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSIL-GPLLGGFLISY--------------------- 147 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHH-HHHHHHHCCCH---------------------
T ss_pred hhccccccccccccccccccccccchhhhhhhccccccchhhhhhhc-ccchhhhhhhc---------------------
Confidence 78899999999999999999999999999999999999999999976 89999998877
Q ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHh
Q 007665 530 IGRQCYRLSFTILAGVNIFGALITFILVM 558 (594)
Q Consensus 530 ~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 558 (594)
.+|+..|++.+++++++.++...+.+
T Consensus 148 ---~~~~~~~~~~~~~~~~~~il~~~~~~ 173 (352)
T PF07690_consen 148 ---FGWRWAFLISAILSLIAAILFILFLP 173 (352)
T ss_dssp ---CHHCCHHHHHHHHHHHHHHHHHCCC-
T ss_pred ---cccccccccccchhhhhhhhHhhhhh
Confidence 67999999999998888775444443
No 126
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.30 E-value=1.7e-10 Score=118.61 Aligned_cols=153 Identities=12% Similarity=0.061 Sum_probs=106.1
Q ss_pred HHHhhhHHHHHHHHHHHHhhhhhh--chhhhHHHHHH-HhCCCHhHHHHHHHHHhhhh-hhhhhhhhhhcccCc-hHHHH
Q 007665 19 QVLRGRWFMMFASFLIMAGAGATY--LFGTYSKEIKS-TLGYDQTTLNLLSTCKDLGA-NVGVLSGLLAEVTPP-WLVLL 93 (594)
Q Consensus 19 ~~~~~~w~~~~~~~l~~~~~g~~~--~~~~~~~~l~~-~~~~s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr~G~-r~v~~ 93 (594)
+..+.+|..+....+..+..+..+ .+...-|++++ |.+.+.+-.|++.....++. ++.+..|....|.|. |+.++
T Consensus 27 ~~~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli 106 (488)
T KOG2325|consen 27 DERKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLI 106 (488)
T ss_pred cccCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHH
Confidence 344677877666555555444221 22233455544 68888999999655555665 679999999999986 77788
Q ss_pred HHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHhhhhhhhhhhhHhHHhh-cCCCceeehhHHHHHhhhhHHHHHHH
Q 007665 94 VGSAMNFGGYFMIWLAVMKKIAKPKVWQMCLYICIGANSQNFANTGSLVTCVK-NFPESRGMMLGLMKGFVGLSGAVFTQ 172 (594)
Q Consensus 94 ~g~~l~~ig~~l~~~a~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~-~fp~~rg~~~gi~~~~~glg~~i~~~ 172 (594)
.|.++..+|.++- +++..... ..-+.++++|++.|+|.+..... -.++++ ..+++|.++++....+..+|.++||.
T Consensus 107 ~s~ii~~~g~llY-~~l~~~~~-~~~y~mL~~R~l~Gvg~~n~a~l-R~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~ 183 (488)
T KOG2325|consen 107 VSFLIAIIGNLLY-LALAYVPN-GVKYLMLVARILTGVGVGNFAVL-RAYIADASTVEDRPRAFAATSGGFVLGIILGPT 183 (488)
T ss_pred HHHHHHHHHHHHH-HHHHhccc-chHHHHHHHHHHcCcCcccHHHH-HHHHHhccCccchHHHHHHhhhHHHHHHHHhHH
Confidence 8999999998875 22333332 25677889999999998865433 455555 55788999999988888788777765
Q ss_pred HH
Q 007665 173 IY 174 (594)
Q Consensus 173 l~ 174 (594)
+.
T Consensus 184 ~q 185 (488)
T KOG2325|consen 184 IQ 185 (488)
T ss_pred HH
Confidence 44
No 127
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.29 E-value=2.5e-11 Score=127.27 Aligned_cols=180 Identities=14% Similarity=0.169 Sum_probs=134.4
Q ss_pred HHHHHHhhccccceeeccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHH
Q 007665 357 LFLATFCGLGCSLTAIDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVG 436 (594)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~ 436 (594)
..+.+++.......+....|.+.+++|+++.+.++..+.+.++..++.+..|+++||+|||+ .+..+.++..++
T Consensus 13 ~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~------~~~~~~~~~~~~ 86 (412)
T TIGR02332 13 LFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARR------WIAGIMVLWGIA 86 (412)
T ss_pred HHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHH------HHHHHHHHHHHH
Confidence 33344443333333334456666788999999999999999999999999999999999883 556666666666
Q ss_pred HHHHhcc-CcchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhh
Q 007665 437 DVLIAFP-KPGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLA 515 (594)
Q Consensus 437 ~~~~~~~-~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~ 515 (594)
.++.... +...+++..++.|++.+...+....++.|.+|+++|+++.|+.+....+|..+ ++++.+.+.+...
T Consensus 87 ~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~-~~~~~~~l~~~~~----- 160 (412)
T TIGR02332 87 STATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMAL-GLILSGYILALDG----- 160 (412)
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCC-----
Confidence 6655543 34567777889999999988888889999999999999999999999999875 8888888764200
Q ss_pred hhhcccccCCCcccccccchHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 007665 516 EKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFILVMRTR 561 (594)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~ 561 (594)
..+..+||.+|++.++..++..++.+++.++++
T Consensus 161 -------------~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p 193 (412)
T TIGR02332 161 -------------LMALKGWQWLFLLEGFPSVILGVMTWFWLDDSP 193 (412)
T ss_pred -------------CCCccchhHHHHHHHHHHHHHHHHHhhccCCCc
Confidence 000247999999988877766665555555543
No 128
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.29 E-value=2.5e-11 Score=126.06 Aligned_cols=175 Identities=17% Similarity=0.191 Sum_probs=136.3
Q ss_pred HHHHHHHHHHhhccccceeeccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHH
Q 007665 353 DMLILFLATFCGLGCSLTAIDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLIL 432 (594)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 432 (594)
.++.+.+..++...........+|.+.++.|+++.+.+...+...++..++.++.|+++||+||| ..+..+.++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r------~~~~~~~~~ 77 (382)
T PRK10091 4 VILSLALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLK------HILLFLVAL 77 (382)
T ss_pred hHHHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccH------HHHHHHHHH
Confidence 34454444444433334445567888889999999999999999999999999999999999987 356667777
Q ss_pred HHHHHHHHhccC-cchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHH
Q 007665 433 SAVGDVLIAFPK-PGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAM 511 (594)
Q Consensus 433 ~~i~~~~~~~~~-~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~ 511 (594)
.+++.++....+ .+.+++..++.|++.+...+....++.+.+++++++++.+....+..++..+ +|++.+.+.+.
T Consensus 78 ~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-g~~l~~~l~~~--- 153 (382)
T PRK10091 78 CVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLL-GIPLGTYLSQE--- 153 (382)
T ss_pred HHHHHHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHH-hccHHHHHhhh---
Confidence 777766665543 4667777889999999888888888999999999999999998888999876 88888888776
Q ss_pred HhhhhhhcccccCCCcccccccchHHHHHHHHHHHHHHHHHHHHHHh
Q 007665 512 KQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFILVM 558 (594)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 558 (594)
.+|+.+|.+.+++.++..+......+
T Consensus 154 ---------------------~gwr~~f~~~~~~~~~~~~~~~~~lp 179 (382)
T PRK10091 154 ---------------------FSWRYTFLLIAVFNIAVLASIYFWVP 179 (382)
T ss_pred ---------------------ccHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 57999999988877666655444333
No 129
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.29 E-value=1.4e-11 Score=126.80 Aligned_cols=156 Identities=13% Similarity=-0.014 Sum_probs=123.1
Q ss_pred eeccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhc-c-----C
Q 007665 371 AIDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAF-P-----K 444 (594)
Q Consensus 371 ~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~-~-----~ 444 (594)
....+|.+..+.+.++.+.+...++..++..++.++.|+++||+|||+ .+..+.++..++..+... . +
T Consensus 18 ~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (365)
T TIGR00900 18 TQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKK------VMIGADLIRAVLVAVLPFVALLGGLN 91 (365)
T ss_pred HHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhH------HHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 334567788888999999999999999999999999999999999884 444444444443333221 2 3
Q ss_pred cchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhhcccccC
Q 007665 445 PGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGMTRAMV 524 (594)
Q Consensus 445 ~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~ 524 (594)
.+.+++..++.|++.+...+...+++.|.++++++++..|..+....+|..+ +|.+.+.+.+.
T Consensus 92 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-g~~l~~~l~~~---------------- 154 (365)
T TIGR00900 92 IWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIV-GPGIGGLMYAT---------------- 154 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHH-HHHHHHHHHHH----------------
Confidence 4556677888999999999999999999999999999999999999999976 99999988876
Q ss_pred CCcccccccchHHHHHHHHHHHHHHHHHHHHHH
Q 007665 525 KDLTCIGRQCYRLSFTILAGVNIFGALITFILV 557 (594)
Q Consensus 525 ~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 557 (594)
.+|+..|++.++..+++.+....+.
T Consensus 155 --------~g~~~~~~~~~~~~~~~~~~~~~~~ 179 (365)
T TIGR00900 155 --------LGIKWAIWVDAVGFAISALLIVSVR 179 (365)
T ss_pred --------hhHHHHHHHHHHHHHHHHHHHHhcc
Confidence 5799999888777666655544443
No 130
>PRK10054 putative transporter; Provisional
Probab=99.28 E-value=1.9e-11 Score=127.31 Aligned_cols=176 Identities=14% Similarity=0.053 Sum_probs=130.1
Q ss_pred HHHHHHHHHHhhccccceeeccHHHHHH-hcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHH
Q 007665 353 DMLILFLATFCGLGCSLTAIDNLGQIGE-SLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLI 431 (594)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 431 (594)
+++.+.+..++...........++.+++ ++|+++.+.++..++..++..++++..|+++||+|||+ .+..+.+
T Consensus 8 ~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~------~~~~~~~ 81 (395)
T PRK10054 8 STSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKR------YMLLAIT 81 (395)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcch------hHHHHHH
Confidence 3566666666655554555556677665 57999999999999999999999999999999999873 4455555
Q ss_pred HHHHHHHHHhccC-cchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHH
Q 007665 432 LSAVGDVLIAFPK-PGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREA 510 (594)
Q Consensus 432 ~~~i~~~~~~~~~-~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~ 510 (594)
+..++.+++...+ .+.+++...+.|.+.+...+....+..|.++++++++++|+.+...++|..+ +|.+.+.+.+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~i-gp~l~~~l~~~-- 158 (395)
T PRK10054 82 AFASGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTV-GPPLGTLLVMQ-- 158 (395)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHh--
Confidence 5556655554433 3334444456666666667778888999999999999999999999999875 99888887643
Q ss_pred HHhhhhhhcccccCCCcccccccchHHHHHHHHHHHHHHHHHHHHHHhhh
Q 007665 511 MKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFILVMRT 560 (594)
Q Consensus 511 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 560 (594)
+|+..|++.+++.+++.+...+..+|.
T Consensus 159 -----------------------g~~~~f~~~~~~~~i~~i~~~~~~~~~ 185 (395)
T PRK10054 159 -----------------------SINLPFWLAAICSAFPLVFIQIWVQRS 185 (395)
T ss_pred -----------------------ccCcHHHHHHHHHHHHHHHHHHHHhcc
Confidence 588999988888777766555544333
No 131
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.28 E-value=3.1e-11 Score=125.75 Aligned_cols=152 Identities=11% Similarity=0.137 Sum_probs=126.6
Q ss_pred eeeccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhcc-CcchH
Q 007665 370 TAIDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAFP-KPGSV 448 (594)
Q Consensus 370 ~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~ 448 (594)
.....+|.+.++.|+++.+.+...+...++..+++++.|.++||+||| .++..+.++.+++.++.... +.+.+
T Consensus 38 ~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr------~~~~~~~~~~~~~~~~~~~~~~~~~l 111 (394)
T PRK10213 38 LPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRR------YVVILFAVLLTLSCLLVSFANSFSLL 111 (394)
T ss_pred HHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcH------HHHHHHHHHHHHHHHHHHHHChHHHH
Confidence 334457788889999999999999999999999999999999999988 45666777777766655543 34667
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhhcccccCCCcc
Q 007665 449 YVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGMTRAMVKDLT 528 (594)
Q Consensus 449 ~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~ 528 (594)
++..++.|++.+...+....++.|.+|+++++++.+......+++..+ +|.+.+.+.+.
T Consensus 112 ~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~i-g~~l~~~l~~~-------------------- 170 (394)
T PRK10213 112 LIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVI-AAPLGSFLGEL-------------------- 170 (394)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhh--------------------
Confidence 778899999999999999999999999999999999999999999875 99999988876
Q ss_pred cccccchHHHHHHHHHHHHHHHHH
Q 007665 529 CIGRQCYRLSFTILAGVNIFGALI 552 (594)
Q Consensus 529 ~~~~~~~~~~f~~~~~~~~~~~~~ 552 (594)
.+|+..|++.++++++..+.
T Consensus 171 ----~gw~~~f~~~~~l~~~~~l~ 190 (394)
T PRK10213 171 ----IGWRNVFNAAAVMGVLCIFW 190 (394)
T ss_pred ----cCHHHHHHHHHHHHHHHHHH
Confidence 57999999887766655443
No 132
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.28 E-value=4e-11 Score=132.08 Aligned_cols=168 Identities=14% Similarity=0.136 Sum_probs=120.9
Q ss_pred cHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhcc-CcchHHHHH
Q 007665 374 NLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAFP-KPGSVYVAS 452 (594)
Q Consensus 374 ~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~ 452 (594)
.+|.+.++.|+++.+.+++.+++.++.++|.+++|+++||+|||+ .+.+++++.+++.++..+. +.+.+++..
T Consensus 189 ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~------~lii~lil~~i~~ll~afa~s~~~llv~R 262 (742)
T TIGR01299 189 VLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQ------CLLICLSVNGFFAFFSSFVQGYGFFLFCR 262 (742)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHH------HHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 456666788999999999999999999999999999999999884 4455555555555544433 345677778
Q ss_pred HHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhhcccccCCCcccccc
Q 007665 453 LLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGMTRAMVKDLTCIGR 532 (594)
Q Consensus 453 ~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 (594)
++.|++.|+..+..+.++.|.+|+++||...+...++..+|.++ ++.+...+........ .. ......
T Consensus 263 ~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~il-a~~la~~il~~~G~~~--------~~---g~~~~~ 330 (742)
T TIGR01299 263 LLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIY-AAAMAWAIIPHYGWSF--------QM---GSAYQF 330 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhccchh--------cc---cccccc
Confidence 99999999999999999999999999999999999999998865 7766555543210000 00 000112
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHhhh
Q 007665 533 QCYRLSFTILAGVNIFGALITFILVMRT 560 (594)
Q Consensus 533 ~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 560 (594)
.+|+..+++.++.+++++++. ++.+++
T Consensus 331 ~gWR~l~~i~~lp~ll~ll~~-~~lPES 357 (742)
T TIGR01299 331 HSWRVFVIVCAFPCVFAIGAL-TFMPES 357 (742)
T ss_pred ccHHHHHHHHHHHHHHHHHHH-HHcCCC
Confidence 469998888777666555443 333444
No 133
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.28 E-value=7.6e-12 Score=129.95 Aligned_cols=157 Identities=17% Similarity=0.184 Sum_probs=126.7
Q ss_pred ccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhcc-CcchHHHH
Q 007665 373 DNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAFP-KPGSVYVA 451 (594)
Q Consensus 373 ~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~ 451 (594)
...|.+.++.|+++.+.+...++..++..++.++.|+++||+|||+ .+..+.++.+++..+.... +.+.+++.
T Consensus 15 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (399)
T TIGR00893 15 FAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARK------TLAVFIVIWGVFTGLQAFAGAYVSLYIL 88 (399)
T ss_pred HhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcce------eeHHHHHHHHHHHHHHHHHcCHHHHHHH
Confidence 4456777788999999999999999999999999999999999874 3444555555555544433 44567777
Q ss_pred HHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhhcccccCCCccccc
Q 007665 452 SLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGMTRAMVKDLTCIG 531 (594)
Q Consensus 452 ~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (594)
.++.|++.+...+....++.|.+|+++|++..|+......+|..+ +|.+.+.+.+.
T Consensus 89 ~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~-~~~~~~~l~~~----------------------- 144 (399)
T TIGR00893 89 RVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGII-GGPLVGWILIH----------------------- 144 (399)
T ss_pred HHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHH-HHHHHHHHHHh-----------------------
Confidence 889999999999999999999999999999999999999999976 89888888776
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHhhh
Q 007665 532 RQCYRLSFTILAGVNIFGALITFILVMRT 560 (594)
Q Consensus 532 ~~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 560 (594)
.+|+..|++.+++.++..+...+..++.
T Consensus 145 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (399)
T TIGR00893 145 -FSWQWAFIIEGVLGIIWGVLWLKFIPDP 172 (399)
T ss_pred -CCchHHHHHHHHHHHHHHHHhhheecCC
Confidence 5799999988887777666665554443
No 134
>PRK03545 putative arabinose transporter; Provisional
Probab=99.28 E-value=3.7e-11 Score=125.16 Aligned_cols=153 Identities=9% Similarity=0.085 Sum_probs=126.0
Q ss_pred cHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhcc-CcchHHHHH
Q 007665 374 NLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAFP-KPGSVYVAS 452 (594)
Q Consensus 374 ~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~ 452 (594)
..|.+.+++|.++.+.++..+.+.++..++.+..|++.||+||| ..+..+.++.+++.+..... +.+.+++..
T Consensus 31 ~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r 104 (390)
T PRK03545 31 LLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERR------KLLIGLFVLFIASHVLSALAWNFTVLLISR 104 (390)
T ss_pred chHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChH------HHHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 46888889999999999999999999999999999999999988 35666666767766655543 345666677
Q ss_pred HHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhhcccccCCCcccccc
Q 007665 453 LLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGMTRAMVKDLTCIGR 532 (594)
Q Consensus 453 ~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 (594)
++.|++.+..++....++.|.+|+++|+++.|+......++..+ +|++.+.+.+.
T Consensus 105 ~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~i-g~~l~~~l~~~------------------------ 159 (390)
T PRK03545 105 IGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVL-GLPLGRVIGQY------------------------ 159 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHH-HhhHHHHHHHH------------------------
Confidence 88888888888888899999999999999999999999999876 89888888776
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHH
Q 007665 533 QCYRLSFTILAGVNIFGALITFILV 557 (594)
Q Consensus 533 ~~~~~~f~~~~~~~~~~~~~~~~~~ 557 (594)
.+|+..|++.++++++..+......
T Consensus 160 ~gw~~~f~~~~~~~~l~~~~~~~~~ 184 (390)
T PRK03545 160 LGWRTTFLAIGGGALITLLLLIKLL 184 (390)
T ss_pred hcHHHHHHHHHHHHHHHHHHHHHhC
Confidence 5799999999888777665554443
No 135
>TIGR00895 2A0115 benzoate transport.
Probab=99.27 E-value=2.3e-11 Score=126.62 Aligned_cols=157 Identities=19% Similarity=0.192 Sum_probs=125.3
Q ss_pred eccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhcc-CcchHHH
Q 007665 372 IDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAFP-KPGSVYV 450 (594)
Q Consensus 372 ~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~ 450 (594)
....|.+.+++|+++.+.+.+.++..++..++.++.|+++||++||+ .+..+.++..++.++.... +.+.+++
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (398)
T TIGR00895 37 GFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKR------VLLWSILLFSVFTLLCALATNVTQLLI 110 (398)
T ss_pred HhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHH------HHHHHHHHHHHHHHHHHHccchHHHHH
Confidence 34567777888999999999999999999999999999999999873 4555666666665555443 3455666
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhhcccccCCCcccc
Q 007665 451 ASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGMTRAMVKDLTCI 530 (594)
Q Consensus 451 ~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (594)
..++.|++.+...+....++.|.+|+++++++.|+......+|..+ +|.+.+.+.+.
T Consensus 111 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~-~~~~~~~l~~~---------------------- 167 (398)
T TIGR00895 111 LRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAV-GGFLAGWLIPV---------------------- 167 (398)
T ss_pred HHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHH-HHHHHHHHhhc----------------------
Confidence 7888999999999999999999999999999999999999999876 89888888776
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHhh
Q 007665 531 GRQCYRLSFTILAGVNIFGALITFILVMR 559 (594)
Q Consensus 531 ~~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 559 (594)
.+|+..|++.+++.++..++.....++
T Consensus 168 --~g~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (398)
T TIGR00895 168 --FGWRSLFYVGGIAPLLLLLLLMRFLPE 194 (398)
T ss_pred --ccceeehhhhhhHHHHHHHHHHHhCCC
Confidence 568888888876666665555554444
No 136
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.27 E-value=2.5e-11 Score=129.22 Aligned_cols=172 Identities=15% Similarity=0.178 Sum_probs=136.9
Q ss_pred HHHHHHHHHHhhccccceeeccHHHHHHh---cCCCCCcchhhHHHHhhhhhHhhhhhccccHH-HhhhccCCchHHHHH
Q 007665 353 DMLILFLATFCGLGCSLTAIDNLGQIGES---LGYPQHTINTFVSLVSIWNYFGRVFAGFVSEI-ILLKYKVPRPLIMAI 428 (594)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr-~g~r~~~~~~~~~~~ 428 (594)
.+|.+.+..++.-..++....+++.|+++ +|+++.+++..++.+.++..++++++|+++|| +||| ..+..
T Consensus 11 ~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~------~~l~~ 84 (475)
T TIGR00924 11 PLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTK------KTMVL 84 (475)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchH------HHHHH
Confidence 35556666666555556667778888875 79999999999999999999999999999999 7887 46677
Q ss_pred HHHHHHHHHHHHhccC-cchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCc---cccccchhhccchhhhhhhhhhHHHh
Q 007665 429 SLILSAVGDVLIAFPK-PGSVYVASLLVGFSYGAQLTLLFIIISELFGLKY---YSTLFNCGQLASPLGSYVLNVIVVGR 504 (594)
Q Consensus 429 ~~~~~~i~~~~~~~~~-~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~---~g~~~g~~~~~~~lg~~~~gp~~~g~ 504 (594)
+.++.+++.+++...+ ...+++...+.|++.|...+...+++++.+++++ +++++++.+...++|+++ ||.+.+.
T Consensus 85 ~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~i-g~~l~g~ 163 (475)
T TIGR00924 85 GGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFI-SPLLAGV 163 (475)
T ss_pred HHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHH-HHHHHHH
Confidence 7777778777766543 3455566778899999888889999999998754 888999999999999976 9999999
Q ss_pred hhhHHHHHhhhhhhcccccCCCcccccccchHHHHHHHHHHHHHHHHHHHH
Q 007665 505 LYDREAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFI 555 (594)
Q Consensus 505 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~ 555 (594)
+.+. .+|+..|.+.++..+++.+....
T Consensus 164 l~~~------------------------~g~~~~f~~~~~~~~~~~l~~~~ 190 (475)
T TIGR00924 164 IAEN------------------------YGYHVGFNLAAVGMVIGLLTFFA 190 (475)
T ss_pred HHHh------------------------cChHHHHHHHHHHHHHHHHHHHH
Confidence 9876 57999999988766665544433
No 137
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.25 E-value=6.7e-12 Score=129.70 Aligned_cols=158 Identities=17% Similarity=0.156 Sum_probs=124.1
Q ss_pred eeccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhccC-cchHH
Q 007665 371 AIDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAFPK-PGSVY 449 (594)
Q Consensus 371 ~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~ 449 (594)
+....|.+.+++|+++.+.+.+.++..++..++.++.|+++||++||+ .+..+.++..++.++....+ .+.++
T Consensus 14 ~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (379)
T TIGR00881 14 FALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRV------FLPIGLILCAIVNLFFGFSTSLWVMA 87 (379)
T ss_pred hhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCee------hhHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 334467777788999999999999999999999999999999999873 45666666666666555433 45566
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhh-HHHhhhhHHHHHhhhhhhcccccCCCcc
Q 007665 450 VASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVI-VVGRLYDREAMKQLAEKGMTRAMVKDLT 528 (594)
Q Consensus 450 ~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~-~~g~l~~~~~~~~~~~~~~~~~~~~~~~ 528 (594)
+..++.|++.+...+....++.|.+++++++++.|+.+....+|..+ +|. +.+.+.+.
T Consensus 88 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~-------------------- 146 (379)
T TIGR00881 88 ALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGL-LPPLVLFGIAEL-------------------- 146 (379)
T ss_pred HHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHH-HHHHHHHHHHhc--------------------
Confidence 67788899999888999999999999999999999999999999876 774 44444443
Q ss_pred cccccchHHHHHHHHHHHHHHHHHHHHHHhh
Q 007665 529 CIGRQCYRLSFTILAGVNIFGALITFILVMR 559 (594)
Q Consensus 529 ~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 559 (594)
.+|+..|++.+++.++..++.....++
T Consensus 147 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (379)
T TIGR00881 147 ----YSWHWVFIVPGIIAIIVSLICFLLLRD 173 (379)
T ss_pred ----CCchhHHHHHHHHHHHHHHHHheeeCC
Confidence 578999988887777766665555444
No 138
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.25 E-value=5.6e-11 Score=123.89 Aligned_cols=160 Identities=13% Similarity=0.138 Sum_probs=127.5
Q ss_pred eeeccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhccC-cchH
Q 007665 370 TAIDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAFPK-PGSV 448 (594)
Q Consensus 370 ~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~ 448 (594)
.....+|.+.+++|.++.+.+...+.+.++..++.++.|+++||+||| ..+..+.++..++..+....+ .+.+
T Consensus 21 ~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r------~~l~~~~~~~~i~~~~~~~~~~~~~~ 94 (392)
T PRK10473 21 MYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRK------PVAIPGAALFIIASLLCSLAETSSLF 94 (392)
T ss_pred HHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCCh------HHHHHHHHHHHHHHHHHHHhCcHHHH
Confidence 334567888889999999999999999999999999999999999887 355566666666666555443 3455
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhhcccccCCCcc
Q 007665 449 YVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGMTRAMVKDLT 528 (594)
Q Consensus 449 ~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~ 528 (594)
++..++.|++.+...+....++.|.+++++|+++.+..+....++..+ +|.+.+.+.+.
T Consensus 95 ~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~-~~~i~~~l~~~-------------------- 153 (392)
T PRK10473 95 LAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVL-APVLGHLIMLK-------------------- 153 (392)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhC--------------------
Confidence 666788899988888888899999999999999999999888888765 88787777655
Q ss_pred cccccchHHHHHHHHHHHHHHHHHHHHHHhhh
Q 007665 529 CIGRQCYRLSFTILAGVNIFGALITFILVMRT 560 (594)
Q Consensus 529 ~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 560 (594)
.+|+..|++.+++.++..++.....+++
T Consensus 154 ----~g~~~~~~~~~~~~~i~~~~~~~~~~~~ 181 (392)
T PRK10473 154 ----FPWQSLFYTMAAMGILVLLLSLFILKET 181 (392)
T ss_pred ----cChHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 5799999998888777777665555444
No 139
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.24 E-value=1.1e-10 Score=122.12 Aligned_cols=165 Identities=16% Similarity=0.157 Sum_probs=124.0
Q ss_pred HHHHHHHhhccccceeeccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHH
Q 007665 356 ILFLATFCGLGCSLTAIDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAV 435 (594)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i 435 (594)
..++.+++............|.+.++.|+++.+.+...+...++..++.++.|+++||+|||+ .+..+.++..+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~------~~~~~~~~~~~ 89 (405)
T TIGR00891 16 AAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRL------PMVTSIVLFSA 89 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHH------HHHHHHHHHHH
Confidence 333444443333333344456777788999999999999999999999999999999999884 45556666666
Q ss_pred HHHHHhcc-CcchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhh
Q 007665 436 GDVLIAFP-KPGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQL 514 (594)
Q Consensus 436 ~~~~~~~~-~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~ 514 (594)
+.++.... +.+.+++..++.|++.+...+....++.|.+++++++++.|+..+...+|..+ ++.+.+.+.+..
T Consensus 90 ~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~l~~~l~~~~----- 163 (405)
T TIGR00891 90 GTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVV-AAQVYSLVVPVW----- 163 (405)
T ss_pred HHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHH-HHHHHHHHHHhc-----
Confidence 55555443 34566777889999999999999999999999999999999999999999875 888888877651
Q ss_pred hhhhcccccCCCcccccccchHHHHHHHHHHHHHH
Q 007665 515 AEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFG 549 (594)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 549 (594)
..+|+..|++.++..++.
T Consensus 164 -----------------~~~w~~~f~~~~~~~~~~ 181 (405)
T TIGR00891 164 -----------------GDGWRALFFISILPIIFA 181 (405)
T ss_pred -----------------CccHHHHHHHHHHHHHHH
Confidence 024898888765544443
No 140
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.22 E-value=3.6e-11 Score=129.08 Aligned_cols=159 Identities=14% Similarity=0.213 Sum_probs=131.9
Q ss_pred eeccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhccC-cchHH
Q 007665 371 AIDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAFPK-PGSVY 449 (594)
Q Consensus 371 ~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~ 449 (594)
.....|.+.++.|.++.+.++..+.+.++..++.++.|+++||+||| ..+..+.++..++.++....+ .+.++
T Consensus 21 ~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r------~~~~~~~~~~~~~~~~~~~~~~~~~l~ 94 (485)
T TIGR00711 21 VNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTR------RLFLISTFAFTLGSLLCGVAPNLELMI 94 (485)
T ss_pred HHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcH------HHHHHHHHHHHHHHHHHhCcCCHHHHH
Confidence 33457888889999999999999999999999999999999999987 356667777777766665443 45667
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhhcccccCCCccc
Q 007665 450 VASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGMTRAMVKDLTC 529 (594)
Q Consensus 450 ~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~ 529 (594)
+..++.|++.+...+....++.|.+|+++|+++.++......+|..+ +|.+.|.+.+.
T Consensus 95 ~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~-g~~~~~~l~~~--------------------- 152 (485)
T TIGR00711 95 IFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPAL-GPTLGGWIIEN--------------------- 152 (485)
T ss_pred HHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhh-hhccHhHhccC---------------------
Confidence 77889999999999999999999999999999999999999999875 99999988876
Q ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHhhh
Q 007665 530 IGRQCYRLSFTILAGVNIFGALITFILVMRT 560 (594)
Q Consensus 530 ~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 560 (594)
.+|++.|++.+.+.++..+...+..++.
T Consensus 153 ---~~w~~~f~~~~~~~~~~~~~~~~~~~~~ 180 (485)
T TIGR00711 153 ---YHWRWIFLINVPIGIIVVVVAFFILPRD 180 (485)
T ss_pred ---cCceehhhhhhHHHHHHHHHHHHHcCCc
Confidence 5799999998888777776666554443
No 141
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.20 E-value=1.5e-10 Score=121.30 Aligned_cols=161 Identities=12% Similarity=0.073 Sum_probs=126.2
Q ss_pred ceeeccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhccC-cch
Q 007665 369 LTAIDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAFPK-PGS 447 (594)
Q Consensus 369 ~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~ 447 (594)
......+|.+.++++.+..+.+...+++.++..++.+++|+++||+|||+ .+..+..+.+++.++....+ ...
T Consensus 33 ~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~------~l~~~~~~~~~~~~~~~~a~~~~~ 106 (413)
T PRK15403 33 DLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRP------VLITGALIFTLACAATLFTTSMTQ 106 (413)
T ss_pred HhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchH------HHHHHHHHHHHHHHHHHHcCCHHH
Confidence 34445567788889999999999999999999999999999999999883 45556666666655555443 456
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhhcccccCCCc
Q 007665 448 VYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGMTRAMVKDL 527 (594)
Q Consensus 448 ~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~ 527 (594)
+++..++.|++.+...+....+..|.+++++++++.+.......++..+ ||.+.+.+.+.
T Consensus 107 l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~lg~~l~~~------------------- 166 (413)
T PRK15403 107 FLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPII-GPLSGAALMHF------------------- 166 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHh-------------------
Confidence 6777788999887666666778889999999999999999999999875 89888777765
Q ss_pred ccccccchHHHHHHHHHHHHHHHHHHHHHHhhh
Q 007665 528 TCIGRQCYRLSFTILAGVNIFGALITFILVMRT 560 (594)
Q Consensus 528 ~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 560 (594)
.+|+..|++.+++.+++.+..++..+++
T Consensus 167 -----~gw~~~f~~~~~~~~i~~~~~~~~lp~~ 194 (413)
T PRK15403 167 -----VHWKVLFAIIAVMGLIAFVGLLLAMPET 194 (413)
T ss_pred -----cCHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 5799999999888777766555444443
No 142
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.20 E-value=1e-10 Score=125.70 Aligned_cols=171 Identities=13% Similarity=0.043 Sum_probs=134.3
Q ss_pred HHHHHhhccccceeeccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHH
Q 007665 358 FLATFCGLGCSLTAIDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGD 437 (594)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~ 437 (594)
.+..++...-...+...+|.+.+++|.+..+.++..+.+.++..++.+..|+++||+||| ..+..+.++..++.
T Consensus 12 ~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk------~~l~~~~~~~~~~~ 85 (495)
T PRK14995 12 VLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFK------RLLMLGGTLFGLAS 85 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccH------HHHHHHHHHHHHHH
Confidence 333444333333344457889899999999999999999999999999999999999988 45667777777776
Q ss_pred HHHhccC-cchHHHHHHHHHHHhhhhHHHHHHHHHHhc-cCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhh
Q 007665 438 VLIAFPK-PGSVYVASLLVGFSYGAQLTLLFIIISELF-GLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLA 515 (594)
Q Consensus 438 ~~~~~~~-~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~ 515 (594)
+++...+ .+.+++..++.|++.+...+.....+.+.+ ++++|+++.|+......+|..+ ||.+.|.+.+.
T Consensus 86 ~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~-gp~lgg~l~~~------- 157 (495)
T PRK14995 86 LAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAF-GPLVGGILLEH------- 157 (495)
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhhcc-------
Confidence 6666544 456666778999999988877777776766 6789999999999999999875 99999999887
Q ss_pred hhhcccccCCCcccccccchHHHHHHHHHHHHHHHHHHHHHHhh
Q 007665 516 EKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFILVMR 559 (594)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 559 (594)
.+|++.|++...++++.+++.....++
T Consensus 158 -----------------~gwr~~f~i~~~~~~~~~~l~~~~l~~ 184 (495)
T PRK14995 158 -----------------FYWGSVFLINVPIVLVVMGLTARYVPR 184 (495)
T ss_pred -----------------CChHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 689999999888877777666665544
No 143
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.20 E-value=1e-10 Score=124.26 Aligned_cols=157 Identities=17% Similarity=0.165 Sum_probs=116.2
Q ss_pred ccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhcc-----Ccch
Q 007665 373 DNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAFP-----KPGS 447 (594)
Q Consensus 373 ~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~~-----~~~~ 447 (594)
...|++.++ |+++.+.++..+...++..++.++.|+++||+|||+ ++..+.++.+++.+++... +...
T Consensus 50 ~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~------~l~~~~~~~~i~~~~~~~~~~~~~~~~~ 122 (452)
T PRK11273 50 LAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRV------FLPAGLILAAAVMLFMGFVPWATSSIAV 122 (452)
T ss_pred HhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCch------hHHHHHHHHHHHHHHHHhhhcccccHHH
Confidence 345665556 999999999999999999999999999999999873 5566666666655554432 1234
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhhcccccCCCc
Q 007665 448 VYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGMTRAMVKDL 527 (594)
Q Consensus 448 ~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~ 527 (594)
+++..++.|++.+..++.....+.+.+++++++++.|+.+.+..+|+.+.+|.+...+...
T Consensus 123 ~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~------------------- 183 (452)
T PRK11273 123 MFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWF------------------- 183 (452)
T ss_pred HHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHh-------------------
Confidence 4556678899888888877788889999999999999998888888754455332223222
Q ss_pred ccccccchHHHHHHHHHHHHHHHHHHHHHHhhh
Q 007665 528 TCIGRQCYRLSFTILAGVNIFGALITFILVMRT 560 (594)
Q Consensus 528 ~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 560 (594)
.+|+..|++.++++++..++..++.+++
T Consensus 184 -----~gw~~~f~i~~~~~~~~~~l~~~~~~~~ 211 (452)
T PRK11273 184 -----NDWHAALYMPAFAAILVALFAFAMMRDT 211 (452)
T ss_pred -----ccHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 4699999998887777666665555443
No 144
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.19 E-value=2.5e-10 Score=119.54 Aligned_cols=175 Identities=17% Similarity=0.132 Sum_probs=127.7
Q ss_pred HHHHHHHHHHhhccccceeeccHHHHHHhcCCCCCcc-----hhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHH
Q 007665 353 DMLILFLATFCGLGCSLTAIDNLGQIGESLGYPQHTI-----NTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMA 427 (594)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a-----~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~ 427 (594)
.+..+++..++...........+|.+.++.|++..+. +...++..+...++.++.|+++||++||+ .+.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~------~~~ 88 (408)
T PRK09874 15 NLTVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKI------MLL 88 (408)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHH------HHH
Confidence 3444444444443333344556788888888886653 77888999999999999999999998873 445
Q ss_pred HHHHHHHHHHHHHhcc-CcchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhh
Q 007665 428 ISLILSAVGDVLIAFP-KPGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLY 506 (594)
Q Consensus 428 ~~~~~~~i~~~~~~~~-~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~ 506 (594)
.+.++.+++..++... +.+.+++..++.|++.+ ..+.....+.+.+++++++++.|.......+|..+ +|.+.+.+.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~l~ 166 (408)
T PRK09874 89 RSALGMGIVMVLMGLAQNIWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALL-GPLAGGLLA 166 (408)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 5555655665554433 34456666777787654 45666677889999999999999999998998865 898999888
Q ss_pred hHHHHHhhhhhhcccccCCCcccccccchHHHHHHHHHHHHHHHHHHHHHHhh
Q 007665 507 DREAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFILVMR 559 (594)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 559 (594)
+. .+|+..|++.+++.+++.+...++.++
T Consensus 167 ~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (408)
T PRK09874 167 DS------------------------YGLRPVFFITASVLFLCFLVTLFCIRE 195 (408)
T ss_pred HH------------------------hCHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 76 569999999888877777666555444
No 145
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.19 E-value=1.5e-10 Score=124.01 Aligned_cols=180 Identities=14% Similarity=0.158 Sum_probs=131.9
Q ss_pred HHhhchH-HHHHHHHHHHhhccccceeeccHHHHH-HhcCCCCCcchhhHHHHhhhhhHhhhhhccccHH-HhhhccCCc
Q 007665 346 LQALLSI-DMLILFLATFCGLGCSLTAIDNLGQIG-ESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEI-ILLKYKVPR 422 (594)
Q Consensus 346 ~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr-~g~r~~~~~ 422 (594)
.+.+++| .+|..++..++.....+....+++.|+ +++|+++.+++...+.+........+++|+++|| +|||
T Consensus 14 ~~~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r----- 88 (500)
T PRK09584 14 LNAFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTK----- 88 (500)
T ss_pred hhhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchH-----
Confidence 4455666 477777666666555556666777777 4679998888887777766666666789999999 5887
Q ss_pred hHHHHHHHHHHHHHHHHHhccC-c-chHHHHHHHHHHHhhhhHHHHHHHHHHhccCCc--cccccchhhccchhhhhhhh
Q 007665 423 PLIMAISLILSAVGDVLIAFPK-P-GSVYVASLLVGFSYGAQLTLLFIIISELFGLKY--YSTLFNCGQLASPLGSYVLN 498 (594)
Q Consensus 423 ~~~~~~~~~~~~i~~~~~~~~~-~-~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~--~g~~~g~~~~~~~lg~~~~g 498 (594)
..+..+.++..++..++.... . ..+++..++.|++.|...+...+++.+.||+++ ++.++++.+.+.++|+.+ +
T Consensus 89 -~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~-g 166 (500)
T PRK09584 89 -RVIMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFF-S 166 (500)
T ss_pred -HHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHH-H
Confidence 356667677777766655432 2 334555678889988888888899999998543 456788888999999975 9
Q ss_pred hhHHHhhhhHHHHHhhhhhhcccccCCCcccccccchHHHHHHHHHHHHHHHHHHHHH
Q 007665 499 VIVVGRLYDREAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFIL 556 (594)
Q Consensus 499 p~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 556 (594)
|.+.|++.|. .+|+..|.+.++..+++.+.....
T Consensus 167 p~i~g~l~~~------------------------~g~~~~F~i~~i~~~i~~i~~~~~ 200 (500)
T PRK09584 167 MLATPWLAAK------------------------YGWSVAFALSVVGMLITVVNFAFC 200 (500)
T ss_pred HHHHHHHHHh------------------------hCHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999887 579999998877666665544443
No 146
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.18 E-value=1.2e-10 Score=120.63 Aligned_cols=158 Identities=17% Similarity=0.247 Sum_probs=128.4
Q ss_pred eccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhccC-cchHHH
Q 007665 372 IDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAFPK-PGSVYV 450 (594)
Q Consensus 372 ~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~ 450 (594)
...+|.+.+++|+++.+.+...+...++..+++++.|+++||++|| ..+..+.++..++..++...+ .+.+++
T Consensus 11 ~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~------~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 84 (377)
T PRK11102 11 LPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRK------PVILGGTLVFALAAVACALAQTIDQLIY 84 (377)
T ss_pred hccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCCh------HHHHHHHHHHHHHHHHHHHHccHHHHHH
Confidence 3557788889999999999999999999999999999999999877 355666666666665554433 355666
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhhcccccCCCcccc
Q 007665 451 ASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGMTRAMVKDLTCI 530 (594)
Q Consensus 451 ~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (594)
..++.|++.+...+....++.|.+++++++++.++.+....++..+ +|.+.+.+.+.
T Consensus 85 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~l~~~---------------------- 141 (377)
T PRK11102 85 MRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLL-APIIGGWLLVW---------------------- 141 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH----------------------
Confidence 7788899999888888999999999999999999999999999875 89888888876
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHhhh
Q 007665 531 GRQCYRLSFTILAGVNIFGALITFILVMRT 560 (594)
Q Consensus 531 ~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 560 (594)
.+|+..|++.++++++..++.....+++
T Consensus 142 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (377)
T PRK11102 142 --FSWHAIFWVLALAAILAAALVFFFIPET 169 (377)
T ss_pred --cChHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 5799999988888777766665554443
No 147
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.18 E-value=1.6e-10 Score=121.61 Aligned_cols=172 Identities=16% Similarity=0.211 Sum_probs=127.1
Q ss_pred HHHHHHHHHHhhccccceeeccHHHHHHh-cCCCCCcchhhHHHHhhhhhHhhhhhccccHHH-hhhccCCchHHHHHHH
Q 007665 353 DMLILFLATFCGLGCSLTAIDNLGQIGES-LGYPQHTINTFVSLVSIWNYFGRVFAGFVSEII-LLKYKVPRPLIMAISL 430 (594)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~-g~r~~~~~~~~~~~~~ 430 (594)
.++.+....+......+.+..++|.|+++ +|+++.+++...+.+.+...++.+++|+++||+ |||+ .+.++.
T Consensus 10 ~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr------~iliG~ 83 (493)
T PRK15462 10 AIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRM------AVMLGA 83 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHH------HHHHHH
Confidence 34444444444444445555667887764 699999999999999999999999999999999 8873 556777
Q ss_pred HHHHHHHHHHhccC--cchHHHHHHHHHHHhhhhHHHHHHHHHHhccCC--ccccccchhhccchhhhhhhhhhHHHhhh
Q 007665 431 ILSAVGDVLIAFPK--PGSVYVASLLVGFSYGAQLTLLFIIISELFGLK--YYSTLFNCGQLASPLGSYVLNVIVVGRLY 506 (594)
Q Consensus 431 ~~~~i~~~~~~~~~--~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~--~~g~~~g~~~~~~~lg~~~~gp~~~g~l~ 506 (594)
++..++.+++.... ...+++...+..++.|...+..+++++|.||++ +|.+++++.+...++|+++ +|.+.|++.
T Consensus 84 il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~i-ap~l~g~L~ 162 (493)
T PRK15462 84 LLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSII-APIACGYAQ 162 (493)
T ss_pred HHHHHHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHH-HHHHHHHHH
Confidence 77777766554322 223444455566777776777788999999875 6999999999999999976 999999997
Q ss_pred hHHHHHhhhhhhcccccCCCcccccccchHHHHHHHHHHHHHHHHHHHH
Q 007665 507 DREAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFI 555 (594)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~ 555 (594)
+. .+|+..|.+.++..+++.+..+.
T Consensus 163 ~~------------------------~Gw~~~F~iaaigm~l~li~~~~ 187 (493)
T PRK15462 163 EE------------------------YSWAMGFGLAAVGMIAGLVIFLC 187 (493)
T ss_pred hh------------------------hChHHHHHHHHHHHHHHHHHHHH
Confidence 76 57999999877666555554433
No 148
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.18 E-value=7.6e-11 Score=121.21 Aligned_cols=156 Identities=11% Similarity=0.038 Sum_probs=119.2
Q ss_pred ccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhc-cCcchHHHH
Q 007665 373 DNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAF-PKPGSVYVA 451 (594)
Q Consensus 373 ~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~ 451 (594)
..+|.+.++.|+|+.+.++..+.+.++..++.+..|+++||+|||+ ++..+......+...... .+...+++.
T Consensus 12 ~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~------~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 85 (368)
T TIGR00903 12 PVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRW------FLFGSLATFAAAAGRLLDPFNYEWLLAC 85 (368)
T ss_pred hhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchH------HHHHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 3467788899999999999999999999999999999999999773 333333333333222222 334567777
Q ss_pred HHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhhcccccCCCccccc
Q 007665 452 SLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGMTRAMVKDLTCIG 531 (594)
Q Consensus 452 ~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (594)
.++.|++.+.. ......++|.+|+++|+++.++...+..+|..+ ++.+.+.+.+.
T Consensus 86 R~l~G~g~~~~-~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l-~~~~~~~l~~~----------------------- 140 (368)
T TIGR00903 86 QLLAALGQPFL-LNAFAPAASQIREERRDLVISLLSFAMYLGIIF-ALAAGLKIYTA----------------------- 140 (368)
T ss_pred HHHHHhHhHHH-HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHc-----------------------
Confidence 88899998864 444455689999999999999999999999976 88787777665
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHhhh
Q 007665 532 RQCYRLSFTILAGVNIFGALITFILVMRT 560 (594)
Q Consensus 532 ~~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 560 (594)
.+||..|++.+++.++..++.++..++.
T Consensus 141 -~gWr~~f~~~~~l~~~~~~~~~~~lp~~ 168 (368)
T TIGR00903 141 -GGLQLLIIPIAAVAAAGIILVLAALPAL 168 (368)
T ss_pred -cchHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 6899999998888877777666655554
No 149
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.18 E-value=1.5e-10 Score=121.19 Aligned_cols=155 Identities=17% Similarity=0.137 Sum_probs=121.1
Q ss_pred cHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhc-cCcchHHHHH
Q 007665 374 NLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAF-PKPGSVYVAS 452 (594)
Q Consensus 374 ~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~ 452 (594)
..|.+.+++|+++.+.+...+...++..++.++.|+++||+|||+ .+..+.++..++.++... .+.+.+.+..
T Consensus 37 ~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (406)
T PRK11551 37 AAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKR------ILIVSVALFGLFSLATAQAWDFPSLLVAR 110 (406)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCch------hHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 356777889999999999999999999999999999999999884 445555555555444433 3345566778
Q ss_pred HHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhhcccccCCCcccccc
Q 007665 453 LLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGMTRAMVKDLTCIGR 532 (594)
Q Consensus 453 ~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 (594)
++.|++.+...+....++.|.+++++++++.|+.+....+|..+ ++.+.+.+.+.
T Consensus 111 ~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~-~~~~~~~~~~~------------------------ 165 (406)
T PRK11551 111 LLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGAL-ASVIGVLAAGD------------------------ 165 (406)
T ss_pred HHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHccc------------------------
Confidence 89999999988889999999999999999999999999998875 78776666554
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHhh
Q 007665 533 QCYRLSFTILAGVNIFGALITFILVMR 559 (594)
Q Consensus 533 ~~~~~~f~~~~~~~~~~~~~~~~~~~~ 559 (594)
.+|+..|++.+++.++..++.....++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~l~~ 192 (406)
T PRK11551 166 AAWRHIFYVGGVGPLLLVPLLMRWLPE 192 (406)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 579999988877666665555444444
No 150
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.17 E-value=3.4e-10 Score=118.11 Aligned_cols=170 Identities=10% Similarity=0.107 Sum_probs=126.8
Q ss_pred HHHHhhccccceeeccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHH
Q 007665 359 LATFCGLGCSLTAIDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDV 438 (594)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~ 438 (594)
...++...........+|.+.+++|+|+.+.+...+...++..++.++.|+++||+|||+ .+..+..+..++.+
T Consensus 15 ~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~------~~~~~~~~~~~~~~ 88 (394)
T PRK11652 15 LLVAVGQMAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRP------VILVGMSIFILGTL 88 (394)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChH------HHHHHHHHHHHHHH
Confidence 333333333333444578888899999999999999999999999999999999999873 45556666666555
Q ss_pred HHhcc-CcchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhh
Q 007665 439 LIAFP-KPGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEK 517 (594)
Q Consensus 439 ~~~~~-~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~ 517 (594)
..... +.+.+++..++.|++.+...+....+..|.++.++++.+.+..+.+..++..+ +|.+.+.+.+.
T Consensus 89 ~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~i~~~l~~~--------- 158 (394)
T PRK11652 89 VALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLL-APLIGGLLTTL--------- 158 (394)
T ss_pred HHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhc---------
Confidence 54433 34556667788898888777777778889998899999999988888888865 89888888765
Q ss_pred hcccccCCCcccccccchHHHHHHHHHHHHHHHHHHHHHHhh
Q 007665 518 GMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFILVMR 559 (594)
Q Consensus 518 ~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 559 (594)
.+|+..|++.+++.++..+......++
T Consensus 159 ---------------~g~~~~f~~~~~~~~~~~~~~~~~~~~ 185 (394)
T PRK11652 159 ---------------FGWRACYLFLLLLGAGVTFSMARWMPE 185 (394)
T ss_pred ---------------cChHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 579999998877666555444444343
No 151
>PRK03699 putative transporter; Provisional
Probab=99.17 E-value=1.5e-10 Score=120.72 Aligned_cols=172 Identities=14% Similarity=0.152 Sum_probs=129.9
Q ss_pred HHHHHHHHHHHhhccccceeeccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHH
Q 007665 352 IDMLILFLATFCGLGCSLTAIDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLI 431 (594)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 431 (594)
+.+|...+.+++.......+-..+|.+.+++++|+.+.+...+...++..++.++.|++.||++||+ .+..+.+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~------~~~~~~~ 80 (394)
T PRK03699 7 KLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKR------QLIFGFA 80 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHH------HHHHHHH
Confidence 3345544554444333334445578888889999999999999999999999999999999999884 4555666
Q ss_pred HHHHHHHHHhccC-cchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHH
Q 007665 432 LSAVGDVLIAFPK-PGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREA 510 (594)
Q Consensus 432 ~~~i~~~~~~~~~-~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~ 510 (594)
+.+++.++....+ .+.+++..++.|++.+...+....++.+.+|+++++.+.+..+....+++.+ +|.+.+.+.+.
T Consensus 81 ~~~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~-~~~~~~~l~~~-- 157 (394)
T PRK03699 81 LMILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMI-FPIIAAYLLAR-- 157 (394)
T ss_pred HHHHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHH-HHHHHHHHHhc--
Confidence 6666665555443 3456667788999998888888889999999999999999888888888865 78888877654
Q ss_pred HHhhhhhhcccccCCCcccccccchHHHHHHHHHHHHHHHHHH
Q 007665 511 MKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALIT 553 (594)
Q Consensus 511 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~ 553 (594)
..+|+..|.+.+++.++..++.
T Consensus 158 ---------------------~~gw~~~f~~~~~~~~~~~~~~ 179 (394)
T PRK03699 158 ---------------------SIEWYWVYACIGLVYVAIFILT 179 (394)
T ss_pred ---------------------cccHHHHHHHHHHHHHHHHHHH
Confidence 2579999998887766655443
No 152
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.17 E-value=2.9e-10 Score=119.07 Aligned_cols=161 Identities=12% Similarity=0.032 Sum_probs=124.0
Q ss_pred ceeeccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhcc-Ccch
Q 007665 369 LTAIDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAFP-KPGS 447 (594)
Q Consensus 369 ~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~ 447 (594)
..+...++.+.++++.|+.+.+...+.+.++..++.++.|+++||++||+ .+..+.++..++.+..... +.+.
T Consensus 30 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~------~l~~~~~~~~~~~~~~~~~~~~~~ 103 (406)
T PRK15402 30 DMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRP------VMLAGVAFFILTCLAILLAQSIEQ 103 (406)
T ss_pred hhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChH------HHHHHHHHHHHHHHHHHHHccHHH
Confidence 33444567778889999999999999999999999999999999999873 4555655555555544433 3455
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhhcccccCCCc
Q 007665 448 VYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGMTRAMVKDL 527 (594)
Q Consensus 448 ~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~ 527 (594)
+++..++.|++.+...+.....+.|.++++++++..++......++..+ +|.+.+.+.+.
T Consensus 104 l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~i~~~l~~~------------------- 163 (406)
T PRK15402 104 FTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLL-GPLVGAALIHV------------------- 163 (406)
T ss_pred HHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHc-------------------
Confidence 6667788898888877888888999999999999888887777777755 89888888776
Q ss_pred ccccccchHHHHHHHHHHHHHHHHHHHHHHhhh
Q 007665 528 TCIGRQCYRLSFTILAGVNIFGALITFILVMRT 560 (594)
Q Consensus 528 ~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 560 (594)
.+|+..|++.+++++++.+......+++
T Consensus 164 -----~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (406)
T PRK15402 164 -----LPWRGMFVLFAALAALSFFGLWRAMPET 191 (406)
T ss_pred -----cCccHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 5799999998888877766555444433
No 153
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.17 E-value=2.2e-10 Score=122.31 Aligned_cols=156 Identities=13% Similarity=0.019 Sum_probs=116.5
Q ss_pred ccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHh-----c-cCcc
Q 007665 373 DNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIA-----F-PKPG 446 (594)
Q Consensus 373 ~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~-----~-~~~~ 446 (594)
...|.+.+++|+++.+.+++.+.+.++..++.++.|+++||+|+|+ ++..+.++.+++.+... . .+..
T Consensus 50 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~------~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (467)
T PRK09556 50 AAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQ------FLPFLLILSAICMLGFGASLGSGSVSLG 123 (467)
T ss_pred hhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccc------hHHHHHHHHHHHHHHHHHHHhcccchHH
Confidence 3467788899999999999999999999999999999999999884 34444444333333222 1 2234
Q ss_pred hHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhhcccccCCC
Q 007665 447 SVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGMTRAMVKD 526 (594)
Q Consensus 447 ~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~ 526 (594)
.+++..++.|++.+..++....++.+.+|++++|++.|+......+|..+ ++.+...+.+...
T Consensus 124 ~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l-~~~i~~~~~~~~~---------------- 186 (467)
T PRK09556 124 LMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAG-AGGVALWGANYFF---------------- 186 (467)
T ss_pred HHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhH-HHHHHHHHHHhhc----------------
Confidence 56667788999999888988999999999999999999999999999876 7766655544310
Q ss_pred cccccccchHHHHHHHHHHHHHHHHHHHHH
Q 007665 527 LTCIGRQCYRLSFTILAGVNIFGALITFIL 556 (594)
Q Consensus 527 ~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 556 (594)
..+|+..|.+.+++.++..+..+++
T Consensus 187 -----~~~~~~~f~~~g~~~~~~~i~~~~~ 211 (467)
T PRK09556 187 -----DGHVIGMFIFPSIIALIIGFIGLRY 211 (467)
T ss_pred -----cCcchhHHHHHHHHHHHHHHHHHHh
Confidence 1257888887777666555555444
No 154
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.17 E-value=1.4e-10 Score=120.72 Aligned_cols=149 Identities=16% Similarity=0.107 Sum_probs=113.3
Q ss_pred hHHHHHHHHHHHhhccccceeeccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHH
Q 007665 351 SIDMLILFLATFCGLGCSLTAIDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISL 430 (594)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~ 430 (594)
+|.|+.+++..++............+.+.++.+.++.+.+...+.+.+...+..++.|+++||++||+ ++..+.
T Consensus 2 ~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~------vl~~~~ 75 (393)
T PRK11195 2 SKGFYAIMAAQFFSALADNALLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGR------VMFIAN 75 (393)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCch------hhHHHH
Confidence 34566666666654433233334455667788888888899999999999999999999999999884 455555
Q ss_pred HHHHHHHHHHhccCcchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhH
Q 007665 431 ILSAVGDVLIAFPKPGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDR 508 (594)
Q Consensus 431 ~~~~i~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~ 508 (594)
++..++.+.+..... .++..++.|++.+...+...+++.|.+|+++++++.|.......++..+ ||.+.|.+.+.
T Consensus 76 ~~~~~~~~~~~~~~~--~~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~-Gp~lgG~l~~~ 150 (393)
T PRK11195 76 GIKLLGCLLMLFGIH--PLLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILL-GTVLGGALADP 150 (393)
T ss_pred HHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 555444443322211 2455678899999999999999999999999999999999999988865 99999999876
No 155
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.16 E-value=4.9e-10 Score=119.69 Aligned_cols=163 Identities=17% Similarity=0.159 Sum_probs=115.2
Q ss_pred eccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhcc-CcchHHH
Q 007665 372 IDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAFP-KPGSVYV 450 (594)
Q Consensus 372 ~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~ 450 (594)
....|.+.+++|++..+.+...+...++..++.++.|+++||+|||+ .+..+.++.+++.++.... +...+++
T Consensus 56 ~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~------~~~~~~~~~~~~~~~~~~~~s~~~l~~ 129 (476)
T PLN00028 56 APLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRY------GSAFLLMLTAPAVFCMSLVSSATGFIA 129 (476)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChH------HHHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 34466777889999999999888999999999999999999999873 4455556666665555443 3345556
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhhcccccCCCcccc
Q 007665 451 ASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGMTRAMVKDLTCI 530 (594)
Q Consensus 451 ~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (594)
..++.|++.+... ....++.+.+|+++||.+.|+.+....+|+.+ ++.+.+.+.+...... +.
T Consensus 130 ~r~l~G~~~~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~-~~~~~~~i~~~~~~~~---------------~~ 192 (476)
T PLN00028 130 VRFFIGFSLATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGV-TQLLMPLVFPLIKDAG---------------AP 192 (476)
T ss_pred HHHHHHHHHHhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcC---------------Cc
Confidence 6678888877543 34567889999999999999998777777754 6656555443210000 00
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHHH
Q 007665 531 GRQCYRLSFTILAGVNIFGALITFILV 557 (594)
Q Consensus 531 ~~~~~~~~f~~~~~~~~~~~~~~~~~~ 557 (594)
+..+||..|++.+++.++..+..+++.
T Consensus 193 ~~~gWr~~f~i~g~l~l~~~l~~~~~~ 219 (476)
T PLN00028 193 SFTAWRIAFFVPGLLHIIMGILVLTLG 219 (476)
T ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHc
Confidence 113699999999988877766665543
No 156
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.16 E-value=2.5e-10 Score=119.23 Aligned_cols=170 Identities=13% Similarity=0.159 Sum_probs=129.8
Q ss_pred HHHHHHHhhccccceeeccHHHHH-HhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHH
Q 007665 356 ILFLATFCGLGCSLTAIDNLGQIG-ESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSA 434 (594)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 434 (594)
.+....++.....+.....++.++ +++|+|+.+.++..+...+...+.+++.|+++||++|| .++..+.++..
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k------~~l~~~~~~~~ 87 (400)
T PRK11646 14 FLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAK------PMIVTGMLMRA 87 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCch------HHHHHHHHHHH
Confidence 333444444334444445556555 56799999999999999999999999999999999887 45667777777
Q ss_pred HHHHHHhccC-cchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHh
Q 007665 435 VGDVLIAFPK-PGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQ 513 (594)
Q Consensus 435 i~~~~~~~~~-~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~ 513 (594)
++.+.+...+ .+.+++..++.|++.+...+...+++.+.+|+++++++.|+......+|..+ ||.+.|.+. .
T Consensus 88 ~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~i-g~~l~g~l~-~----- 160 (400)
T PRK11646 88 AGFATMAIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVI-GALLGSWLL-Q----- 160 (400)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH-H-----
Confidence 7766665443 4556667788898888777888889999999999999999999999999976 999999987 4
Q ss_pred hhhhhcccccCCCcccccccchHHHHHHHHHHHHHHHHHHHHHH
Q 007665 514 LAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFILV 557 (594)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 557 (594)
.+|+..|++.++++++..++.....
T Consensus 161 -------------------~g~~~~f~~~~~~~~~~~i~~~~~~ 185 (400)
T PRK11646 161 -------------------YDFRLVCATGAVLFVLAAAFNAWLL 185 (400)
T ss_pred -------------------hhHHHHHHHHHHHHHHHHHHHHHhC
Confidence 3689999988877776655544433
No 157
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.16 E-value=1.7e-09 Score=112.77 Aligned_cols=150 Identities=9% Similarity=-0.021 Sum_probs=105.7
Q ss_pred hhhhHH-HHHHHhCCCHhHHHHHHHHHhhhh-hhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHH
Q 007665 44 FGTYSK-EIKSTLGYDQTTLNLLSTCKDLGA-NVGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIAKPKVWQ 121 (594)
Q Consensus 44 ~~~~~~-~l~~~~~~s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~~~~~~ 121 (594)
+....| .+++++|++..+.+++........ +..++.|+++||+|||+.+..+.+...+........ ++.+.
T Consensus 235 ~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~-------~~~~~ 307 (393)
T PRK15011 235 YIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMA-------HSPAI 307 (393)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH-------hhHHH
Confidence 333444 456789999999998544433434 447899999999999998877766554443322111 45666
Q ss_pred HHHHHHHHhhhhhhhhhhhHhHHhhcCCCceeehhHHHHHhhhhHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHH
Q 007665 122 MCLYICIGANSQNFANTGSLVTCVKNFPESRGMMLGLMKGFVGLSGAVFTQIYLAIYGNDAKSMILLIAWLPALVSLVF 200 (594)
Q Consensus 122 l~~~r~l~G~g~g~~~~~~~~~i~~~fp~~rg~~~gi~~~~~glg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~l~~ 200 (594)
+++.+++.+++.+...+....+..|.+|++||++.++.+....+|..+++.+.+.+.+..++...+++...+.+..++.
T Consensus 308 ~l~~~~l~~~~~g~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~ 386 (393)
T PRK15011 308 LLGLQLLNAIYIGILGGIGMLYFQDLMPGQAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFC 386 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 6778888888777766666677788999889999999888888999999988888777555555555555454444443
No 158
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.15 E-value=4.5e-11 Score=125.66 Aligned_cols=178 Identities=15% Similarity=0.057 Sum_probs=128.9
Q ss_pred HhhchHHHHHHHHHHHhhccccceeeccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHH
Q 007665 347 QALLSIDMLILFLATFCGLGCSLTAIDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIM 426 (594)
Q Consensus 347 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~ 426 (594)
...++|.++.+....++............|.+.++.+.++.+.+...+...++..++.++.|+++||++||+. +
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~------l 85 (417)
T PRK10489 12 LLKTHPAFRAVFIARFISIFGLGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKL------I 85 (417)
T ss_pred HHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceE------E
Confidence 3445777777666655544433344455677778888888899999999999999999999999999998852 2
Q ss_pred HHHHHHHHHHHHHHh-----cc-CcchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhh
Q 007665 427 AISLILSAVGDVLIA-----FP-KPGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVI 500 (594)
Q Consensus 427 ~~~~~~~~i~~~~~~-----~~-~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~ 500 (594)
..+.++.+++...+. .. +.+.+++..++.|++.+...+.....+.+.+++++++++.++.....++|..+ ||.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-g~~ 164 (417)
T PRK10489 86 LLARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVI-SPA 164 (417)
T ss_pred EehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHh-HHH
Confidence 223333333322211 12 22445556677888888777888888999999999999999999999999875 999
Q ss_pred HHHhhhhHHHHHhhhhhhcccccCCCcccccccchHHHHHHHHHHHHHHHHHHHH
Q 007665 501 VVGRLYDREAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFI 555 (594)
Q Consensus 501 ~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~ 555 (594)
+.|.+.+. .+|++.|++.++..+++.++...
T Consensus 165 l~g~l~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~ 195 (417)
T PRK10489 165 LGGLLIAA------------------------GGVAWNYGLAAAGTFITLLPLLR 195 (417)
T ss_pred HHHHHHHH------------------------HhhHHHHHHHHHHHHHHHHHHHh
Confidence 99998877 46888888877766666554433
No 159
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.15 E-value=1.4e-10 Score=119.75 Aligned_cols=158 Identities=12% Similarity=0.107 Sum_probs=122.3
Q ss_pred ceeeccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhccC-cch
Q 007665 369 LTAIDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAFPK-PGS 447 (594)
Q Consensus 369 ~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~ 447 (594)
+......|.+.+++|+++.+.+...+++.++..++.+..|+++||+|||+ .+..+.++.+++.+.....+ .+.
T Consensus 20 ~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~------~~~~~~~~~~~~~~~~~~~~~~~~ 93 (377)
T TIGR00890 20 YTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRA------VAMLGGILYGLGFTFYAIADSLAA 93 (377)
T ss_pred hhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccc------hhHHhHHHHHHHHHHHHHHHHHHH
Confidence 33444577888889999999999999999999999999999999999884 44556666666666555433 355
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhhcccccCCCc
Q 007665 448 VYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGMTRAMVKDL 527 (594)
Q Consensus 448 ~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~ 527 (594)
+++...+.|++.+..++.......+.++ ++++++.+.......+|..+ ++++.+.+.+.
T Consensus 94 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~------------------- 152 (377)
T TIGR00890 94 LYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFI-LSPLITSVINL------------------- 152 (377)
T ss_pred HHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhH-HHHHHHHHHhc-------------------
Confidence 6666778899988877777777888886 78999999999999998865 44466666554
Q ss_pred ccccccchHHHHHHHHHHHHHHHHHHHHHHh
Q 007665 528 TCIGRQCYRLSFTILAGVNIFGALITFILVM 558 (594)
Q Consensus 528 ~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 558 (594)
.+|+..|++.+++.++..+..+++.+
T Consensus 153 -----~~~~~~f~~~~~~~~~~~~~~~~~~~ 178 (377)
T TIGR00890 153 -----EGVPAAFIYMGIIFLLVIVLGAFLIG 178 (377)
T ss_pred -----ccHHHHHHHHHHHHHHHHHHHHHhee
Confidence 57999999998888777766665543
No 160
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.15 E-value=2.1e-10 Score=119.87 Aligned_cols=133 Identities=16% Similarity=0.084 Sum_probs=102.0
Q ss_pred eeeccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHH---hcc--C
Q 007665 370 TAIDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLI---AFP--K 444 (594)
Q Consensus 370 ~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~---~~~--~ 444 (594)
....+.+.+.+++|+++.+.++..+.+.++..++.++.|++.||++||+ .+..+..+.+++.++. ... +
T Consensus 31 ~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~------~l~~~~~~~~~~~~~~~~~~~~~~~ 104 (402)
T TIGR00897 31 LEQGWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLK------TMMIGLLLWCVGHAAFIVFGLGHAN 104 (402)
T ss_pred hHHHhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHH------HHHHHHHHHHHHHHHHHHHhccCcc
Confidence 3445667788899999999999999999999999999999999999884 4555555555554332 122 2
Q ss_pred cchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhH
Q 007665 445 PGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDR 508 (594)
Q Consensus 445 ~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~ 508 (594)
.+.+++..++.|++.+...+.....+.+.+++++++++.|+......+|..+++|++.+.+.+.
T Consensus 105 ~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~ 168 (402)
T TIGR00897 105 YPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPA 168 (402)
T ss_pred HHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 3345556677788877766666777888999999999999999999888644488888887765
No 161
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.14 E-value=4e-09 Score=113.28 Aligned_cols=136 Identities=16% Similarity=0.089 Sum_probs=91.0
Q ss_pred hhhchhhhHHHH-HHHhCCCHhHHHHHHHHHhhhhh-hhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhccCCh
Q 007665 40 ATYLFGTYSKEI-KSTLGYDQTTLNLLSTCKDLGAN-VGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIAKP 117 (594)
Q Consensus 40 ~~~~~~~~~~~l-~~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~~ 117 (594)
..|.+..+.|.+ ++++|.+..+..++.....++.+ ..++.|+++||+|||++++++.+++.++...+.... .++
T Consensus 265 ~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~----~~~ 340 (490)
T PRK10642 265 TYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILI----NSN 340 (490)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHH----hCC
Confidence 344555566665 46789998877775555556654 477999999999999999888765444433322111 113
Q ss_pred hHHHHHHHHHHHhhhhhhhhhhhHhHHhhcCCC-ceeehhHHHHHhhhhHHHHHHHHHHHHhC
Q 007665 118 KVWQMCLYICIGANSQNFANTGSLVTCVKNFPE-SRGMMLGLMKGFVGLSGAVFTQIYLAIYG 179 (594)
Q Consensus 118 ~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp~-~rg~~~gi~~~~~glg~~i~~~l~~~l~~ 179 (594)
+...+++.+++.|++.+........++.+.||+ .||+++|+......+++.++|.+.+.+.+
T Consensus 341 ~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~ 403 (490)
T PRK10642 341 VIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVE 403 (490)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456667788888877666655666777889985 69999997443334666777776665544
No 162
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.14 E-value=3.7e-10 Score=120.63 Aligned_cols=141 Identities=21% Similarity=0.245 Sum_probs=107.8
Q ss_pred CCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhc-cCc---chHHHHHHHHHHHh
Q 007665 384 YPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAF-PKP---GSVYVASLLVGFSY 459 (594)
Q Consensus 384 ~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~-~~~---~~~~~~~~l~G~~~ 459 (594)
.+..+.+...+++.++..++.++.|+++||+|||+ .+.++.++..++.++... ... +.+++..++.|++.
T Consensus 68 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~ 141 (481)
T TIGR00879 68 YSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKK------SLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGV 141 (481)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHH------HHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhh
Confidence 33788899999999999999999999999999883 455565566665555432 222 25677789999999
Q ss_pred hhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHH---HhhhhHHHHHhhhhhhcccccCCCcccccccchH
Q 007665 460 GAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVV---GRLYDREAMKQLAEKGMTRAMVKDLTCIGRQCYR 536 (594)
Q Consensus 460 g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~---g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 536 (594)
+...+....++.|.+++++|+++.++.+....+|..+ ++.+. +...+. .+|+
T Consensus 142 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~-~~~~~~~~~~~~~~------------------------~~w~ 196 (481)
T TIGR00879 142 GIASALVPMYLSEIAPKALRGALTSLYQLAITFGILV-AYGFGSGKVSLNNT------------------------LGWR 196 (481)
T ss_pred hHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHH-HHHHHHHhhcCCCC------------------------ccHH
Confidence 9999999999999999999999999999999999875 78665 222222 5799
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 007665 537 LSFTILAGVNIFGALITFI 555 (594)
Q Consensus 537 ~~f~~~~~~~~~~~~~~~~ 555 (594)
..|++.+...++..+...+
T Consensus 197 ~~f~~~~~~~~~~~~~~~~ 215 (481)
T TIGR00879 197 IPLGLQLIPAGLLFLGLFF 215 (481)
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 9999966655555444333
No 163
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.13 E-value=2.3e-10 Score=117.96 Aligned_cols=146 Identities=17% Similarity=0.225 Sum_probs=110.1
Q ss_pred HHHHHHHHHhhccccceeeccHHH-HHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHH
Q 007665 354 MLILFLATFCGLGCSLTAIDNLGQ-IGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLIL 432 (594)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 432 (594)
+|..++.+++.....+.+....|+ +.+++|+|+.+.++..++..++..++.++.|+++||+|||+ .+..+.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~------~~~~~~~~ 76 (366)
T TIGR00886 3 LFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRY------TTTLSLLL 76 (366)
T ss_pred hHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchH------HHHHHHHH
Confidence 555566666555555556666775 66788999999999999999999999999999999999873 55666677
Q ss_pred HHHHHHHHhccC--cchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhh
Q 007665 433 SAVGDVLIAFPK--PGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYD 507 (594)
Q Consensus 433 ~~i~~~~~~~~~--~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~ 507 (594)
..++.+++.... .+.+++..++.|++.+ .+.....++.+.+++++++++.++.....++|..+ ++.+.+.+.+
T Consensus 77 ~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~-~~~i~~~l~~ 151 (366)
T TIGR00886 77 LAIPCLWAGLAVQSYSVLLLLRLFIGIAGG-SFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGV-AQFVMPPIIG 151 (366)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhch-hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHH-HHHHHHHHHH
Confidence 777666655433 3455666778888755 45566778999999999999999988777777754 6666665554
No 164
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.11 E-value=3.4e-10 Score=119.35 Aligned_cols=141 Identities=14% Similarity=0.122 Sum_probs=116.2
Q ss_pred eccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhccC-cchHHH
Q 007665 372 IDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAFPK-PGSVYV 450 (594)
Q Consensus 372 ~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~ 450 (594)
....|.+.++.|.++.+.+...+...++..++.++.|+++||+||| ..+..+.++.+++.+.....+ .+.+++
T Consensus 38 ~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r------~~l~~~~~~~~~~~~~~~~~~~~~~l~~ 111 (426)
T PRK12307 38 FYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRK------PLMMWSIVAYSVGTGLSGLASGVIMLTL 111 (426)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh------HHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 4445667778899999999999999999999999999999999987 456667777767666555443 456777
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhhcccccCCCcccc
Q 007665 451 ASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGMTRAMVKDLTCI 530 (594)
Q Consensus 451 ~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (594)
..++.|++.+..++....++.|.+++++|+++.|+...+..+|.++ ++.+.+.+.+.
T Consensus 112 ~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~-~~~l~~~l~~~---------------------- 168 (426)
T PRK12307 112 SRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNII-AAYFMPSFAEA---------------------- 168 (426)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHH-HHHHHHHHccc----------------------
Confidence 7889999999999999999999999999999999999999999875 78777777665
Q ss_pred cccchHHHHHHHH
Q 007665 531 GRQCYRLSFTILA 543 (594)
Q Consensus 531 ~~~~~~~~f~~~~ 543 (594)
.+|+..|++..
T Consensus 169 --~~w~~~f~i~~ 179 (426)
T PRK12307 169 --YGWRAAFFVGL 179 (426)
T ss_pred --CCHHHHHHHHH
Confidence 57999988744
No 165
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.11 E-value=6e-09 Score=108.72 Aligned_cols=122 Identities=18% Similarity=0.214 Sum_probs=96.6
Q ss_pred hcCCCCCcchhhHHHHhhhhhHhhhhhc-cccHHHhhhccCCchHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHh
Q 007665 381 SLGYPQHTINTFVSLVSIWNYFGRVFAG-FVSEIILLKYKVPRPLIMAISLILSAVGDVLIAFPKPGSVYVASLLVGFSY 459 (594)
Q Consensus 381 ~~g~s~~~a~~~~~~~~i~~~~g~~~~g-~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~G~~~ 459 (594)
..++++.+.+.+.+..++.+.++.++.. .+...++.| .+...++..-.+......+.+..+.+....++....
T Consensus 271 ~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~------~~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~~~~~ 344 (463)
T KOG2816|consen 271 KFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEK------RLISLGLLSEFLQLLLFAFATETWMMFAAGVVVALA 344 (463)
T ss_pred ecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh------hHhhHHHHHHHHHHHHHHHhccchhhhHHHHHHHhh
Confidence 4589999999999999999999999887 666666655 366777777778777777766544444455556666
Q ss_pred hhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHH
Q 007665 460 GAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDRE 509 (594)
Q Consensus 460 g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~ 509 (594)
+..++..-+.++...+++++|+++++......+++.+ +|.+.+.++...
T Consensus 345 ~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~-~~~~~~~i~~~t 393 (463)
T KOG2816|consen 345 GIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVV-SPALYGNIFALT 393 (463)
T ss_pred cchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhh-hHHHHHHHHHHH
Confidence 6778888899999999999999999999999999976 888999887664
No 166
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.11 E-value=5.8e-10 Score=113.81 Aligned_cols=166 Identities=24% Similarity=0.286 Sum_probs=132.4
Q ss_pred HHHhhccccceeeccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHH
Q 007665 360 ATFCGLGCSLTAIDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVL 439 (594)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~ 439 (594)
..++............+.+.++.|.++.+.+...+...++..++.++.|+++||++||+ .+..+.++..++.+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~------~~~~~~~~~~~~~~~ 80 (352)
T cd06174 7 GFFLSGLDRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRR------VLLLGLLLFALGSLL 80 (352)
T ss_pred HHHHHHHhhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCch------hhHHHHHHHHHHHHH
Confidence 33333333344455677888888999999999999999999999999999999999873 556666666666665
Q ss_pred Hhcc-CcchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhh
Q 007665 440 IAFP-KPGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKG 518 (594)
Q Consensus 440 ~~~~-~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~ 518 (594)
.... +.+.+++..++.|++.+...+....+..|.+++|+|++..+.......+|..+ +|.+.+.+.+.
T Consensus 81 ~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~---------- 149 (352)
T cd06174 81 LAFASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALL-GPLLGGLLAES---------- 149 (352)
T ss_pred HHHhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHH-HHHHHHHHHHH----------
Confidence 5543 34566677889999999999999999999999999999999999999999976 89999988877
Q ss_pred cccccCCCcccccccchHHHHHHHHHHHHHHHHHHHHH
Q 007665 519 MTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFIL 556 (594)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 556 (594)
.+|+..+++.+++.+++.+...++
T Consensus 150 --------------~~~~~~~~~~~~~~~~~~~~~~~~ 173 (352)
T cd06174 150 --------------LGWRWLFLILAILGLLLALLLLFL 173 (352)
T ss_pred --------------hhHHHHHHHHHHHHHHHHHHHHHH
Confidence 458888888887777776665544
No 167
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.11 E-value=1.1e-09 Score=114.07 Aligned_cols=148 Identities=15% Similarity=0.110 Sum_probs=122.0
Q ss_pred eeccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhccC-cchHH
Q 007665 371 AIDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAFPK-PGSVY 449 (594)
Q Consensus 371 ~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~ 449 (594)
+...+|.+.+++|+|+.+.++..+.+.++..++.++.|+++||+||| ..+..+..+.+++.+.....+ ...++
T Consensus 28 ~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r------~~l~~~~~l~~~~~~~~~~a~~~~~ll 101 (393)
T PRK09705 28 VGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSER------RSVAISLLLIAVGALMRELYPQSALLL 101 (393)
T ss_pred cchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCch------HHHHHHHHHHHHHHHHHHHCcchHHHH
Confidence 34557788888999999999999999999999999999999999988 477888888888888776554 45677
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhhcccccCCCccc
Q 007665 450 VASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGMTRAMVKDLTC 529 (594)
Q Consensus 450 ~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~ 529 (594)
+..++.|++.+...+..+.++.+.++ ++++.+.|....+..+|..+ ++.+.+.+.+.
T Consensus 102 ~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~-g~~~~~~l~~~--------------------- 158 (393)
T PRK09705 102 SSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGL-GAAITPWLVQH--------------------- 158 (393)
T ss_pred HHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHH-HHHHHHHHHHh---------------------
Confidence 77899999999988888899999987 88999999999888888865 88888887766
Q ss_pred ccccchHHHHHHHHHHHHHH
Q 007665 530 IGRQCYRLSFTILAGVNIFG 549 (594)
Q Consensus 530 ~~~~~~~~~f~~~~~~~~~~ 549 (594)
..+|+..+.+.++..++.
T Consensus 159 --~~~w~~~~~~~~~~~~~~ 176 (393)
T PRK09705 159 --SETWYQTLAWWALPAVVA 176 (393)
T ss_pred --cCCHHHHHHHHHHHHHHH
Confidence 246888877666554443
No 168
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.10 E-value=4.9e-10 Score=119.46 Aligned_cols=170 Identities=14% Similarity=0.161 Sum_probs=127.3
Q ss_pred HHHHHHHHHHhhccccceeeccHHHHHH-hcCCCCCcchhhHHHHhhhhhHhhhhhccccHH-HhhhccCCchHHHHHHH
Q 007665 353 DMLILFLATFCGLGCSLTAIDNLGQIGE-SLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEI-ILLKYKVPRPLIMAISL 430 (594)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr-~g~r~~~~~~~~~~~~~ 430 (594)
.+|.+++..+..-..++.....++.|++ ++|+++.++......+.....+..+++|+++|| +||| ..+..+.
T Consensus 15 ~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r------~~~~~g~ 88 (489)
T PRK10207 15 PFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTK------RTIVLGA 88 (489)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchH------HHHHHHH
Confidence 3555554444443444444455556654 689999999888888888888888999999999 9988 4667777
Q ss_pred HHHHHHHHHHhccCc--chHHHHHHHHHHHhhhhHHHHHHHHHHhccCC--ccccccchhhccchhhhhhhhhhHHHhhh
Q 007665 431 ILSAVGDVLIAFPKP--GSVYVASLLVGFSYGAQLTLLFIIISELFGLK--YYSTLFNCGQLASPLGSYVLNVIVVGRLY 506 (594)
Q Consensus 431 ~~~~i~~~~~~~~~~--~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~--~~g~~~g~~~~~~~lg~~~~gp~~~g~l~ 506 (594)
++..++.+.+..... ..+++..++.|+|.|...+...+++.|.||++ +++.+++..+...++|.++ ||.+.|++.
T Consensus 89 ~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~-g~~l~g~l~ 167 (489)
T PRK10207 89 IVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLI-SLSLAPVIA 167 (489)
T ss_pred HHHHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHH-HHHHHHHHH
Confidence 777777766654432 23446678889999998888999999999877 4578999999999999975 999999998
Q ss_pred hHHHHHhhhhhhcccccCCCcccccccchHHHHHHHHHHHHHHHHHH
Q 007665 507 DREAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALIT 553 (594)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~ 553 (594)
+. .+|+..|++.++..+++.+..
T Consensus 168 ~~------------------------~gw~~~F~i~~i~~~~~~~~~ 190 (489)
T PRK10207 168 DK------------------------FGYSVTYNLCGAGLIIALLVY 190 (489)
T ss_pred Hh------------------------hChHHHHHHHHHHHHHHHHHH
Confidence 77 579999998765444444333
No 169
>PRK11043 putative transporter; Provisional
Probab=99.10 E-value=7.2e-10 Score=115.92 Aligned_cols=154 Identities=14% Similarity=0.151 Sum_probs=120.5
Q ss_pred eccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhcc-CcchHHH
Q 007665 372 IDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAFP-KPGSVYV 450 (594)
Q Consensus 372 ~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~ 450 (594)
...+|.+.++.|.++.+.+...+++.++..++.+++|+++||++||+ .+..+..+..++.++.... +.+.+.+
T Consensus 26 ~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~------~~~~~~~~~~~~~~~~~~~~~~~~l~~ 99 (401)
T PRK11043 26 LPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKP------VLLAGLSLFALGSLGMLWVESAAQLLV 99 (401)
T ss_pred HhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcH------HHHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 33456667788999999999999999999999999999999999873 4555555555555554433 3345566
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhhcccccCCCcccc
Q 007665 451 ASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGMTRAMVKDLTCI 530 (594)
Q Consensus 451 ~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (594)
..++.|++.+...+....++.|.+++++++...+..+....++..+ +|.+.+.+.+.
T Consensus 100 ~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~i~~~l~~~---------------------- 156 (401)
T PRK11043 100 LRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPAL-APLLGAWLLNH---------------------- 156 (401)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhc----------------------
Confidence 6788888887777777788899999888888888888888888865 89899988876
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHH
Q 007665 531 GRQCYRLSFTILAGVNIFGALITFIL 556 (594)
Q Consensus 531 ~~~~~~~~f~~~~~~~~~~~~~~~~~ 556 (594)
.+|+..|++.+++.++..+....+
T Consensus 157 --~g~~~~~~~~~~~~~~~~~~~~~~ 180 (401)
T PRK11043 157 --FGWQAIFATLFAITLLLILPTLRL 180 (401)
T ss_pred --CChHHHHHHHHHHHHHHHHHHHHc
Confidence 579999998888777766655444
No 170
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.10 E-value=6.2e-10 Score=115.81 Aligned_cols=188 Identities=13% Similarity=0.056 Sum_probs=124.2
Q ss_pred hHHHHHHHHHHHhhccccceeeccHHHHHH-hcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHH
Q 007665 351 SIDMLILFLATFCGLGCSLTAIDNLGQIGE-SLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAIS 429 (594)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~ 429 (594)
+|.++...+.++.....-+......+.+.+ ++++|+.+.+++.++..+...++|+..|++.||+|.|+ .+.++
T Consensus 33 ~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~------v~~~~ 106 (462)
T PRK15034 33 RRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRR------WTVFS 106 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChH------HHHHH
Confidence 345666655555544433333333445545 68999999999999999999999999999999999873 45555
Q ss_pred HHHHHHHHHHHhc------cCcchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHH
Q 007665 430 LILSAVGDVLIAF------PKPGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVG 503 (594)
Q Consensus 430 ~~~~~i~~~~~~~------~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g 503 (594)
.++..+..+.... .+...+++..++.|++ +..++.....+++.||++++|++.|+.....++|..+ ++++..
T Consensus 107 ~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l-~~~l~p 184 (462)
T PRK15034 107 TAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSV-MQLVAP 184 (462)
T ss_pred HHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHH-HHHHHH
Confidence 5555565555543 2345677778899997 7788888889999999999999999996555555543 333333
Q ss_pred hhh-----hHHHHHhhhhhhcccccCCCcccc-cccchHHHHHHHHHHHHHHHHHHHHHHh
Q 007665 504 RLY-----DREAMKQLAEKGMTRAMVKDLTCI-GRQCYRLSFTILAGVNIFGALITFILVM 558 (594)
Q Consensus 504 ~l~-----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 558 (594)
.+. +...... ..... +..+++.++++...+.++..++.+++..
T Consensus 185 ~~i~~~l~~~~G~~~------------~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~ 233 (462)
T PRK15034 185 LVIFVPVFAFLGVNG------------VPQADGSVMSLANAAWIWVPLLAIATIAAWSGMN 233 (462)
T ss_pred HHHHHHHHHHhcccc------------ccccccchHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 222 2210000 00000 1245888888888888777777776643
No 171
>PRK12382 putative transporter; Provisional
Probab=99.10 E-value=7.5e-10 Score=115.40 Aligned_cols=151 Identities=16% Similarity=0.128 Sum_probs=108.0
Q ss_pred hHHHHHHHHHHHhhccccceeeccHHHHH-HhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHH
Q 007665 351 SIDMLILFLATFCGLGCSLTAIDNLGQIG-ESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAIS 429 (594)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~ 429 (594)
++.++.+.+..++...........+|.+. +++|+|+.+.+...+.+.+...+++++.|+++||+|||+ .+..+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~------~l~~~ 87 (392)
T PRK12382 14 NFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKR------SALQG 87 (392)
T ss_pred cccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchH------HHHHH
Confidence 34445544444443333333334456554 578999999999999999999999999999999999884 44444
Q ss_pred HHHHHHHHH---HHhc-c-----CcchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhh
Q 007665 430 LILSAVGDV---LIAF-P-----KPGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVI 500 (594)
Q Consensus 430 ~~~~~i~~~---~~~~-~-----~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~ 500 (594)
.+...++.+ +... . +...+++..++.|++.+...+...+++.+.+|+|+|+++.|.......++..+ +|+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~-g~~ 166 (392)
T PRK12382 88 MLACGLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAA-GAP 166 (392)
T ss_pred HHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHH-HHH
Confidence 444333322 2111 1 12345666788999988878877888899999999999999998888888765 898
Q ss_pred HHHhhhhH
Q 007665 501 VVGRLYDR 508 (594)
Q Consensus 501 ~~g~l~~~ 508 (594)
+.+.+.+.
T Consensus 167 ~~~~l~~~ 174 (392)
T PRK12382 167 LGLLLHSH 174 (392)
T ss_pred HHHHHHhc
Confidence 88888766
No 172
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.09 E-value=6.1e-09 Score=107.70 Aligned_cols=134 Identities=11% Similarity=0.041 Sum_probs=98.9
Q ss_pred HHHHHhCCCHhHHHHHHHHHhhhh-hhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHH
Q 007665 50 EIKSTLGYDQTTLNLLSTCKDLGA-NVGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIAKPKVWQMCLYICI 128 (594)
Q Consensus 50 ~l~~~~~~s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~~~~~~l~~~r~l 128 (594)
.+++++|.++.+.+++........ ...++.|++.||+|+|+++.++.++..+........ ++.+.+.+.+++
T Consensus 225 ~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~ 297 (375)
T TIGR00899 225 LIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAAD-------NSLWALLMLQLL 297 (375)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHH
Confidence 356789999999988544433333 457799999999999999888766555443332221 456666778889
Q ss_pred HhhhhhhhhhhhHhHHhhcCCCceeehhHHHHHhhhhHHHHHHHHHHHHhCCChHHHHHHHH
Q 007665 129 GANSQNFANTGSLVTCVKNFPESRGMMLGLMKGFVGLSGAVFTQIYLAIYGNDAKSMILLIA 190 (594)
Q Consensus 129 ~G~g~g~~~~~~~~~i~~~fp~~rg~~~gi~~~~~glg~~i~~~l~~~l~~~~~~~~~~~~~ 190 (594)
.|++.+...+....++.+.+|++++++.|+......+|..+++.+.+.+.+..+++..+++.
T Consensus 298 ~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~ 359 (375)
T TIGR00899 298 NAIFIGILAGIGMLYFQDLMPGRAGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFA 359 (375)
T ss_pred HHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHH
Confidence 99988888777778888999988889999998888899999998888777654444444333
No 173
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.09 E-value=1.2e-09 Score=116.88 Aligned_cols=290 Identities=12% Similarity=0.073 Sum_probs=178.6
Q ss_pred chhhhHHHHHHHhCCCHhHHHHHHHHHhhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHH--H---------
Q 007665 43 LFGTYSKEIKSTLGYDQTTLNLLSTCKDLGANV-GVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLA--V--------- 110 (594)
Q Consensus 43 ~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a--~--------- 110 (594)
.+.....++++.|+++.++.+++...+-++... ..+.....-|..|-+.+-+|.+++++|.+++.+= +
T Consensus 115 y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~ 194 (735)
T KOG3626|consen 115 YFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELE 194 (735)
T ss_pred hhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhh
Confidence 345566889999999999999988888888865 6699999999999999999999999999887542 0
Q ss_pred h----hcc----------------------------CChh-HH-HHHHHHHHHhhhhhhhhhhhHhHHhhcCC-Cceeeh
Q 007665 111 M----KKI----------------------------AKPK-VW-QMCLYICIGANSQNFANTGSLVTCVKNFP-ESRGMM 155 (594)
Q Consensus 111 ~----~~~----------------------------~~~~-~~-~l~~~r~l~G~g~g~~~~~~~~~i~~~fp-~~rg~~ 155 (594)
. ... .+++ ++ .++++.++.|+|....++....++-|... ++-...
T Consensus 195 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplY 274 (735)
T KOG3626|consen 195 VIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLY 274 (735)
T ss_pred hhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHH
Confidence 0 000 0011 33 34467899999999999999999988886 567888
Q ss_pred hHHHHHhhhhHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHhcc--CCCC---CCCchhHHHHH-HHHHHHHH
Q 007665 156 LGLMKGFVGLSGAVFTQIYLAIYGNDAKSMILLIAWLPALVSLVFVYTIRP--LKVS---SHPNELKVFYE-YLYITISL 229 (594)
Q Consensus 156 ~gi~~~~~glg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~---~~~~~~~~f~~-~~~~~~~~ 229 (594)
+|++.+..-+|.+++=.+++..+.- ++.. .+.. ....|-.+||. +++.+
T Consensus 275 lgi~~~~~~lGPaiGfllgS~~l~l----------------------YvD~~~~~~~it~~DPrWIGAWWlGFLi~g--- 329 (735)
T KOG3626|consen 275 LGILYSMAILGPAIGFLLGSFCLKL----------------------YVDFGLSPIGITPTDPRWIGAWWLGFLICG--- 329 (735)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHe----------------------eeccccCCCCCCCCCcchhhHHHHHHHHHH---
Confidence 9998877777777764444333221 1121 1111 12345555551 11111
Q ss_pred HHHHHHHhhhhcccCCCCccccchhhHHHHhhhhcchhhhhhhhhhhhcCCCCCCCcccccccccchhhhhhhhhhhccc
Q 007665 230 ALCLMGLTIAQKQAHFPHVGYIGSAIAVCIFVFLPLFIAFREEFAAWQQRKQPTPASAVVIVFEQTTLVATKSEILEIES 309 (594)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (594)
.+.++..+|++.+-++.++...++ + .. +.
T Consensus 330 --------------------------~~~~~~a~p~f~fPk~lp~~~~~~-~---~~-----~~---------------- 358 (735)
T KOG3626|consen 330 --------------------------ALLLFSAVPLFFFPKELPKSQKRK-R---AR-----DL---------------- 358 (735)
T ss_pred --------------------------HHHHHHHHHHHhCcccCccccccc-h---hh-----hh----------------
Confidence 122233334443322211110000 0 00 00
Q ss_pred ccccccccccCCCCCCCCCcCCCCCCCCCCCCCccHHHhhchHHHHHHHHHHHhhccccceeeccHHHHHHh-cCCCCCc
Q 007665 310 DHSQTLQTENKKQEPDQTPCCGNIFKPPKRGEDYGILQALLSIDMLILFLATFCGLGCSLTAIDNLGQIGES-LGYPQHT 388 (594)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~ 388 (594)
+. ..++++ ..+..... ...-+..+...+++++||.|....+...+.......+..++|.|++. +|.++..
T Consensus 359 --~~----~k~~~~--~~~~~~~~-~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~ 429 (735)
T KOG3626|consen 359 --HV----LKTESG--GAKSDKTF-GKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYITFLPKYLETQFGISASL 429 (735)
T ss_pred --cc----cccccc--cccCCcch-hhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHH
Confidence 00 000000 00000000 00001123467899999999998888777777777788889999985 5999999
Q ss_pred chhhHHH-HhhhhhHhhhhhccccHHHhhh
Q 007665 389 INTFVSL-VSIWNYFGRVFAGFVSEIILLK 417 (594)
Q Consensus 389 a~~~~~~-~~i~~~~g~~~~g~l~dr~g~r 417 (594)
+..++.. .-.+.++|.+++|++..|+.-+
T Consensus 430 An~l~G~i~vp~~~~Gi~lGG~iikkfkl~ 459 (735)
T KOG3626|consen 430 ANILTGSIGVPAAAVGIFLGGLIIKKFKLS 459 (735)
T ss_pred HHHHhhhhhhhhhhhhhhccceeeeeeccc
Confidence 9988854 4456678899999999988543
No 174
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.08 E-value=8.8e-10 Score=117.20 Aligned_cols=179 Identities=16% Similarity=0.188 Sum_probs=125.6
Q ss_pred hhchHHHHHHHHHHHhhcc----ccceeeccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCch
Q 007665 348 ALLSIDMLILFLATFCGLG----CSLTAIDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRP 423 (594)
Q Consensus 348 ~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~ 423 (594)
.+++++++..+..+.+... ........++++.+++|-+ ....++.+...+.+.++.++.|.++|.+|||
T Consensus 36 ~~~s~~~i~~~~~~~~~~~~~~~~~~~~a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr------ 108 (599)
T PF06609_consen 36 YYRSPRFIASFAAFSLAVIAAYFVLVLPASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRR------ 108 (599)
T ss_pred ceeCHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcch------
Confidence 3456666655443333221 2222223456778888855 4456777888999999999999999999988
Q ss_pred HHHHHHHHHHHHHHHHHhccCc-chHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHH
Q 007665 424 LIMAISLILSAVGDVLIAFPKP-GSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVV 502 (594)
Q Consensus 424 ~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~ 502 (594)
+.++.+.++.++|.++....+. ..+.....+.|++.|... +....++|..|.|.|+..+++.......... .+|.+.
T Consensus 109 ~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~-~~~~ia 186 (599)
T PF06609_consen 109 YFFIIGSLLGVVGSIVCATAQNMNTFIAGMVLYGVGAGVQE-LAALAISELVPNKWRGLGLAIASIPFIITTW-ISPLIA 186 (599)
T ss_pred HHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHhhHHHH-HHHHHHHHhcccchhhhHhHHHHHHHHhhhc-ccHHHH
Confidence 6888899999999988876654 567778899999987765 4566689999999998776655543333332 245444
Q ss_pred HhhhhHHHHHhhhhhhcccccCCCcccccccchHHHHHHHHHHHHHHHHHHHHHHhh
Q 007665 503 GRLYDREAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFILVMR 559 (594)
Q Consensus 503 g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 559 (594)
..+... .+||+.|++..++..+++++.++++.+
T Consensus 187 ~~~~~~------------------------~~WRw~~~~~~i~~~i~~vl~~~fY~P 219 (599)
T PF06609_consen 187 QLFAAH------------------------SGWRWIFYIFIIWSGIALVLIFFFYFP 219 (599)
T ss_pred HHhccC------------------------CCcchHHHHHHHHHHHHHHHHHHHhCC
Confidence 443322 579999999999988888877766644
No 175
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.08 E-value=1.3e-09 Score=116.83 Aligned_cols=154 Identities=17% Similarity=0.175 Sum_probs=111.0
Q ss_pred CCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhcc----------C---cchHH
Q 007665 383 GYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAFP----------K---PGSVY 449 (594)
Q Consensus 383 g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~~----------~---~~~~~ 449 (594)
+.++.+.++..+.+.++..++.+++|+++||+|||+ .+..+.++.+++.+..... + ...++
T Consensus 51 ~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~------~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~ 124 (479)
T PRK10077 51 SAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRD------SLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFV 124 (479)
T ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHH------HHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHH
Confidence 777788899999999999999999999999999984 4555555555554443321 1 12345
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhhcccccCCCccc
Q 007665 450 VASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGMTRAMVKDLTC 529 (594)
Q Consensus 450 ~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~ 529 (594)
+..++.|++.|...+..+.+++|.+|+++||++.|+......+|..+ ++.+.+.+.+.. +...
T Consensus 125 ~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~-~~~~~~~~~~~~----------------~~~~ 187 (479)
T PRK10077 125 IYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLV-VYFVNYFIARSG----------------DASW 187 (479)
T ss_pred HHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHH-HHHHHHHHhccC----------------cccc
Confidence 67799999999999999999999999999999999998888888765 664443333210 0000
Q ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHhhh
Q 007665 530 IGRQCYRLSFTILAGVNIFGALITFILVMRT 560 (594)
Q Consensus 530 ~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 560 (594)
.+..+|+..|++.++..++..+..++ .+++
T Consensus 188 ~~~~gWr~~f~~~~~~~~~~~~~~~~-l~~s 217 (479)
T PRK10077 188 LNTDGWRYMFASEAIPALLFLMLLYF-VPET 217 (479)
T ss_pred cccCChHHHHHHHHHHHHHHHHHHHc-CCCC
Confidence 01257999999887777666554433 3443
No 176
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.07 E-value=6.2e-10 Score=119.90 Aligned_cols=160 Identities=16% Similarity=0.155 Sum_probs=124.3
Q ss_pred HHHHHHHHHhhccccceeeccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHH
Q 007665 354 MLILFLATFCGLGCSLTAIDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILS 433 (594)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 433 (594)
+..+++..++............|.+.+++|+|+.+.+...+.+.++..++.++.|+++||+||| ..+..+.++.
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r------~~~~~~~~~~ 95 (496)
T PRK03893 22 FSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRR------LAMVISIVLF 95 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH------HHHHHHHHHH
Confidence 3344444444333333344456777788899999999999999999999999999999999987 3556666666
Q ss_pred HHHHHHHhcc-CcchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHH
Q 007665 434 AVGDVLIAFP-KPGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMK 512 (594)
Q Consensus 434 ~i~~~~~~~~-~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~ 512 (594)
+++.+++... +.+.+++..++.|++.+..++....++.|.+++++++++.++......+|..+ +|.+.+.+.+.
T Consensus 96 ~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~-~~~~~~~l~~~---- 170 (496)
T PRK03893 96 SVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVV-AAQVYSLVVPV---- 170 (496)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcc----
Confidence 6666655544 34556777889999999888999999999999999999999999999999875 89888888776
Q ss_pred hhhhhhcccccCCCcccccccchHHHHHHHHH
Q 007665 513 QLAEKGMTRAMVKDLTCIGRQCYRLSFTILAG 544 (594)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~ 544 (594)
.+|+..|++..+
T Consensus 171 --------------------~~w~~~f~~~~~ 182 (496)
T PRK03893 171 --------------------WGWRALFFIGIL 182 (496)
T ss_pred --------------------CCHHHHHHHHHH
Confidence 579998876443
No 177
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.06 E-value=5e-10 Score=117.86 Aligned_cols=177 Identities=14% Similarity=0.091 Sum_probs=113.2
Q ss_pred HhhchHHHHHHHHHHHhhccccceeeccHHHHHHh-cCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHH
Q 007665 347 QALLSIDMLILFLATFCGLGCSLTAIDNLGQIGES-LGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLI 425 (594)
Q Consensus 347 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~ 425 (594)
+.+++|++|.+.+.+++...........++.++++ .|+++.+.+...++..++..+++++.|+++||+|||+ .
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~------~ 78 (420)
T PRK09528 5 YYLKNPNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKK------H 78 (420)
T ss_pred hhhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchH------H
Confidence 45667889988777777665554556667777776 7999999999999999999999999999999999874 2
Q ss_pred HHHHHHHHHHHHH---HHhccCcc--hHHHHH----HHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhh
Q 007665 426 MAISLILSAVGDV---LIAFPKPG--SVYVAS----LLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYV 496 (594)
Q Consensus 426 ~~~~~~~~~i~~~---~~~~~~~~--~~~~~~----~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~ 496 (594)
+.++..+.+++.. ........ ...... +..|.+.....+....+.. .+ .++++..+|.......+|..+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~g~~~g~~~~~~~~g~~i 156 (420)
T PRK09528 79 LLWIISGLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIE-RV-SRRSGFEYGRARMWGSLGWAL 156 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHH-HH-HhhccccchhhHHhhhHHHHH
Confidence 2232222222211 11111000 111111 2222222222233333332 23 356788889888888999876
Q ss_pred hhhhHHHhhhhHHHHHhhhhhhcccccCCCcccccccchHHHHHHHHHHHHHHHHHHHHHH
Q 007665 497 LNVIVVGRLYDREAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFILV 557 (594)
Q Consensus 497 ~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 557 (594)
+|.+.|.+.+. +|+..|++.+++++++.++.+..+
T Consensus 157 -~~~~~g~l~~~-------------------------~~~~~f~~~~~~~~~~~~~~~~~~ 191 (420)
T PRK09528 157 -CAFIAGILFNI-------------------------NPQINFWLGSGSALILLVLLFFAK 191 (420)
T ss_pred -HHHHHHHHHhc-------------------------CchHhHHHHHHHHHHHHHHHhccc
Confidence 89899888764 478888888777776665554443
No 178
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.05 E-value=5.1e-11 Score=119.33 Aligned_cols=178 Identities=15% Similarity=0.196 Sum_probs=141.0
Q ss_pred HHHHHHHHhhccccceeeccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHH
Q 007665 355 LILFLATFCGLGCSLTAIDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSA 434 (594)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 434 (594)
.++.+...++..--+.+-...+...+..++++...+++..++.+..++..+++|++.||+.|+ +++.++..+-.
T Consensus 36 ~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~------~v~~vG~~iW~ 109 (493)
T KOG1330|consen 36 VILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRK------RVIAVGIFIWT 109 (493)
T ss_pred HHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcc------eEEeeHHHHHH
Confidence 344455555555444454555555566799999999999999999999999999999999877 46677777777
Q ss_pred HHHHHHhccC-cchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHh
Q 007665 435 VGDVLIAFPK-PGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQ 513 (594)
Q Consensus 435 i~~~~~~~~~-~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~ 513 (594)
++.+...+.+ -+.+.++-.+.|+|-+...++.+++++|.|+.++|+..+++.+.+..+|+.+ |-.+.+.+.+.
T Consensus 110 ~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsgl-G~vvgs~va~~----- 183 (493)
T KOG1330|consen 110 LAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGL-GYVVGSVVASL----- 183 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccce-eEEeeeeeccC-----
Confidence 7766665544 3566777899999999999999999999999999999999999999999865 66555555444
Q ss_pred hhhhhcccccCCCcccccccchHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 007665 514 LAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFILVMRTRR 562 (594)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 562 (594)
+..||++|...+++.++..++..++.++.++
T Consensus 184 ------------------~~~Wr~af~~~avl~vi~~~L~~~f~~eP~r 214 (493)
T KOG1330|consen 184 ------------------TFWWRWAFRGSAVLGVIVGLLVFLFVREPER 214 (493)
T ss_pred ------------------ccceEEEEEeehHHHHHHHHHHHhhccCccc
Confidence 3569999999999999999888888766554
No 179
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.04 E-value=5.1e-09 Score=91.27 Aligned_cols=110 Identities=22% Similarity=0.158 Sum_probs=91.0
Q ss_pred hhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHhhhhhhhhhhhHhHHhhcCC-Cce
Q 007665 74 NVGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIAKPKVWQMCLYICIGANSQNFANTGSLVTCVKNFP-ESR 152 (594)
Q Consensus 74 ~~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp-~~r 152 (594)
+.+++.|++.||+|||+.+..+..+..++.++.... ++++.+.+.+++.|++.+...+.....+.|.+| ++|
T Consensus 13 ~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 85 (141)
T TIGR00880 13 IYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALS-------SNITVLIIARFLQGFGAAFALVAGAALIADIYPPEER 85 (141)
T ss_pred HHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHh-------ccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChhhh
Confidence 458899999999999999999988888887665443 567888889999999999888888889999998 579
Q ss_pred eehhHHHHHhhhhHHHHHHHHHHHHhCCChHHHHHHHH
Q 007665 153 GMMLGLMKGFVGLSGAVFTQIYLAIYGNDAKSMILLIA 190 (594)
Q Consensus 153 g~~~gi~~~~~glg~~i~~~l~~~l~~~~~~~~~~~~~ 190 (594)
+++.++......+|..+++.+.+.+.+...++..+++.
T Consensus 86 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 123 (141)
T TIGR00880 86 GVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFL 123 (141)
T ss_pred hHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHH
Confidence 99999999999999999998888777655554444443
No 180
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.03 E-value=1.4e-09 Score=113.62 Aligned_cols=165 Identities=13% Similarity=0.056 Sum_probs=117.1
Q ss_pred HHHHHHHHHHHhhccccceeeccHHHHH-HhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHH
Q 007665 352 IDMLILFLATFCGLGCSLTAIDNLGQIG-ESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISL 430 (594)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~ 430 (594)
+.+..+.+..+.......+....+|.+. ++.|.|+.+.+...+...++..++.++.|+++||+|||+ .+..+.
T Consensus 15 ~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~------~l~~~~ 88 (399)
T PRK05122 15 LRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKK------AVVFGL 88 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcc------hHHHHH
Confidence 3344444444333333333444566654 567999999999999999999999999999999999884 445555
Q ss_pred HHHHHHHHHHh---ccC------cchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhH
Q 007665 431 ILSAVGDVLIA---FPK------PGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIV 501 (594)
Q Consensus 431 ~~~~i~~~~~~---~~~------~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~ 501 (594)
++.+++...+. ..+ ...+++..++.|++.+...+....+..+.+++++++++.+.......+|..+ +|.+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~-g~~l 167 (399)
T PRK05122 89 CGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAI-GAPL 167 (399)
T ss_pred HHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHH-HHHH
Confidence 44444322221 111 1234556788999999888888888899999999999999988888888765 8988
Q ss_pred HHhhhhHHHHHhhhhhhcccccCCCcccccccchHHHHHHHHHHHH
Q 007665 502 VGRLYDREAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNI 547 (594)
Q Consensus 502 ~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~ 547 (594)
.+.+.+. .+|+..+.+..++.+
T Consensus 168 ~~~l~~~------------------------~g~~~~~~~~~~~~~ 189 (399)
T PRK05122 168 GVLLYHW------------------------GGLAGLGLLIMLLAL 189 (399)
T ss_pred HHHHHHc------------------------ccHHHHHHHHHHHHH
Confidence 8888776 568887776655443
No 181
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.03 E-value=6.8e-09 Score=108.93 Aligned_cols=161 Identities=11% Similarity=0.033 Sum_probs=108.4
Q ss_pred hhHHHHHHHhCCCH--------hHHHHHHHHHhhhh-hhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhccCC
Q 007665 46 TYSKEIKSTLGYDQ--------TTLNLLSTCKDLGA-NVGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIAK 116 (594)
Q Consensus 46 ~~~~~l~~~~~~s~--------~~~~~~~~~~~~~~-~~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~ 116 (594)
.+.+...++.+.+. ++.+...+...+.. +..++.|++.||+|+|+++.++.++..++..+.... . ...
T Consensus 229 ~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~--~-~~~ 305 (418)
T TIGR00889 229 IFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYG--D-PEY 305 (418)
T ss_pred HhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHc--C-cch
Confidence 44455556666554 44455434433344 457899999999999999999999888876554321 0 000
Q ss_pred hhHHHHHHHHHHHhhhhhhhhhhhHhHHhhcCC-CceeehhHHHH-HhhhhHHHHHHHHHHHHhCCC------hHHHHHH
Q 007665 117 PKVWQMCLYICIGANSQNFANTGSLVTCVKNFP-ESRGMMLGLMK-GFVGLSGAVFTQIYLAIYGND------AKSMILL 188 (594)
Q Consensus 117 ~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp-~~rg~~~gi~~-~~~glg~~i~~~l~~~l~~~~------~~~~~~~ 188 (594)
.++..+++.+++.|++.+...+....++.+++| ++||++.|+.+ ...++|..+++.+.+.+.+.. +|+..+.
T Consensus 306 ~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~ 385 (418)
T TIGR00889 306 FGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWL 385 (418)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHH
Confidence 134556678999999999888888888999998 57999999996 667899999999998887642 2444333
Q ss_pred -HHHHHHHHHHHHHHHhccCCC
Q 007665 189 -IAWLPALVSLVFVYTIRPLKV 209 (594)
Q Consensus 189 -~~~~~~~~~l~~~~~~~~~~~ 209 (594)
.++..++..++...+++...+
T Consensus 386 ~~~~~~~i~~~l~~~~~~~~~~ 407 (418)
T TIGR00889 386 FFAGYIAILAVLFMIFFKYSHN 407 (418)
T ss_pred HHHHHHHHHHHHHHHHhCCccc
Confidence 333334444444455554433
No 182
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.03 E-value=4.9e-10 Score=119.60 Aligned_cols=148 Identities=16% Similarity=0.222 Sum_probs=117.1
Q ss_pred hcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhc---cCcchHHHHHHHHHH
Q 007665 381 SLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAF---PKPGSVYVASLLVGF 457 (594)
Q Consensus 381 ~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~l~G~ 457 (594)
+.++++.+.+.+.+.+.++..++.++.|+++||+|+|+ .+..+.++.+++.++... .+...+++..++.|+
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~------~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~ 143 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKW------SIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGL 143 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcch------hhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHH
Confidence 46788888899999999999999999999999999884 445555555554444321 223456667889999
Q ss_pred HhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhhcccccCCCcccccccchHH
Q 007665 458 SYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGMTRAMVKDLTCIGRQCYRL 537 (594)
Q Consensus 458 ~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 537 (594)
+.+..++....++.+.+|+++++++.|+...+..+|..+ +|++.+.+.+. ..+|+.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i-~~~l~~~l~~~-----------------------~~gw~~ 199 (465)
T TIGR00894 144 AQGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFI-FLPISGWLCES-----------------------WGGWPM 199 (465)
T ss_pred hcccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhc-----------------------cCCCCe
Confidence 999999999999999999999999999999999999976 89898888765 137999
Q ss_pred HHHHHHHHHHHHHHHHHHHHh
Q 007665 538 SFTILAGVNIFGALITFILVM 558 (594)
Q Consensus 538 ~f~~~~~~~~~~~~~~~~~~~ 558 (594)
.|++.+++.++..++.+.+.+
T Consensus 200 ~f~i~~~~~~~~~~~~~~~~~ 220 (465)
T TIGR00894 200 IFYVFGIVGCAWSLLWFVFPA 220 (465)
T ss_pred ehhhhhHHHHHHHHHHHHHhc
Confidence 999988877666555554443
No 183
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.02 E-value=3.2e-08 Score=103.81 Aligned_cols=133 Identities=18% Similarity=0.185 Sum_probs=92.6
Q ss_pred hhhhHHHHHHHhCCCHhHHHHHHHHHhhhhhhhhhhhhhhcccC-----chHHHHHHHHHHHHHHHHHHHHHhhccCChh
Q 007665 44 FGTYSKEIKSTLGYDQTTLNLLSTCKDLGANVGVLSGLLAEVTP-----PWLVLLVGSAMNFGGYFMIWLAVMKKIAKPK 118 (594)
Q Consensus 44 ~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~~~~G~l~Dr~G-----~r~v~~~g~~l~~ig~~l~~~a~~~~~~~~~ 118 (594)
.....|.+++++|.++++.+.+.....+.-..-++.|.++|.+- ||+-++++.++..++.+..++. ... ..+
T Consensus 9 ~~~~~~~l~~~l~ls~~~~~~~~~~~~lPw~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~--~~~-~~s 85 (433)
T PF03092_consen 9 RLAIYPFLKDDLGLSPAQLQRLSSLASLPWSIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALL--PAS-ESS 85 (433)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHhCchHHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhc--ccc-cch
Confidence 34567889999999999999987777777788999999999983 5555666666665544443221 111 134
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhHhHHhhcC---CCceeehhHHHHHhhhhHHHHHHHHHHHHhC
Q 007665 119 VWQMCLYICIGANSQNFANTGSLVTCVKNF---PESRGMMLGLMKGFVGLSGAVFTQIYLAIYG 179 (594)
Q Consensus 119 ~~~l~~~r~l~G~g~g~~~~~~~~~i~~~f---p~~rg~~~gi~~~~~glg~~i~~~l~~~l~~ 179 (594)
.....++-++..+|.+.....+=....|.- |+.||...+.......+|++++..+.+.+.+
T Consensus 86 ~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~ 149 (433)
T PF03092_consen 86 AAIAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLD 149 (433)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 555556667788888888877766666655 4447777777777777888887766655443
No 184
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.02 E-value=2.3e-09 Score=113.85 Aligned_cols=154 Identities=12% Similarity=0.164 Sum_probs=119.1
Q ss_pred eeccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhccCc-chHH
Q 007665 371 AIDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAFPKP-GSVY 449 (594)
Q Consensus 371 ~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~ 449 (594)
+....+.+.++.|.++.+.+...+.+.+...++.++.|+++||++||+ .+..+.++..++.+++...+. +.++
T Consensus 38 ~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~------~l~~~~~~~~~~~~~~~~~~~~~~l~ 111 (455)
T TIGR00892 38 VTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRP------VVIAGGLLASLGMILASFSSNVIELY 111 (455)
T ss_pred hhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchH------HHHhhHHHHHHHHHHHHHhhhHHHHH
Confidence 344567788889999999999999999999999999999999999873 455566666666665544433 3343
Q ss_pred HH-HHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhhcccccCCCcc
Q 007665 450 VA-SLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGMTRAMVKDLT 528 (594)
Q Consensus 450 ~~-~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~ 528 (594)
+. .++.|++.+..++....++.+.++ ++|+++.|+.+.+..+++.+ +|.+.+.+.+.
T Consensus 112 ~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~-~~~l~~~l~~~-------------------- 169 (455)
T TIGR00892 112 LTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLST-LAPLNQYLFES-------------------- 169 (455)
T ss_pred HHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHH-HHHHHHHHHHH--------------------
Confidence 33 367788888766666677788886 88999999999999999875 88898988887
Q ss_pred cccccchHHHHHHHHHHHHHHHHHHHHH
Q 007665 529 CIGRQCYRLSFTILAGVNIFGALITFIL 556 (594)
Q Consensus 529 ~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 556 (594)
.+|+.+|++.+++.+++.+..++.
T Consensus 170 ----~gwr~~f~~~~~~~~~~~v~~~~~ 193 (455)
T TIGR00892 170 ----FGWRGSFLILGGLLLHCCVCGALM 193 (455)
T ss_pred ----hChHHHHHHHHHHHHHHHHHHHHh
Confidence 579999999998887766554444
No 185
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.01 E-value=2.7e-09 Score=110.74 Aligned_cols=151 Identities=12% Similarity=0.041 Sum_probs=119.9
Q ss_pred hHHHHHHHHHHHhhccccceeeccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHH
Q 007665 351 SIDMLILFLATFCGLGCSLTAIDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISL 430 (594)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~ 430 (594)
+++++.+....++...........+|.+.++.|.|+.+.+...+.+.++..++.++.|+++||+|||+ .+..+.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~------~~~~~~ 78 (381)
T PRK03633 5 TRPVLLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNR------SYYLAS 78 (381)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH------HHHHHH
Confidence 45567777766665555555556788999999999999999999999999999999999999999883 455666
Q ss_pred HHHHHHHHHHhcc-CcchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhH
Q 007665 431 ILSAVGDVLIAFP-KPGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDR 508 (594)
Q Consensus 431 ~~~~i~~~~~~~~-~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~ 508 (594)
++..++....... +.+.+++..++.|++.+...+.....+.+..++++++++.|.......+|..+ ||.+.+.+.+.
T Consensus 79 ~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-g~~~~~~l~~~ 156 (381)
T PRK03633 79 LIFAAGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVL-GQLLVSKVSTE 156 (381)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH-HHHHHhccccc
Confidence 6666666555443 34566677889999998888777777778888899999999999999999876 89888877654
No 186
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.00 E-value=4e-07 Score=92.25 Aligned_cols=131 Identities=6% Similarity=-0.065 Sum_probs=96.1
Q ss_pred hhchhhhHHHHHHH-hCCCHhHHHH-HHHHHh-hhhhhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhccCCh
Q 007665 41 TYLFGTYSKEIKST-LGYDQTTLNL-LSTCKD-LGANVGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIAKP 117 (594)
Q Consensus 41 ~~~~~~~~~~l~~~-~~~s~~~~~~-~~~~~~-~~~~~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~~ 117 (594)
.-+-+.+.|.+.+. .|++.+|+.- +.-... ....+.++...+.|..|.|++++++.+...+...+.-+. +
T Consensus 20 rPsEPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~-------~ 92 (412)
T PF01770_consen 20 RPSEPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFG-------T 92 (412)
T ss_pred CCCCccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH-------C
Confidence 33455667777765 8999999987 432222 222346699999999999999999988877777776444 6
Q ss_pred hHHHHHHHHHHHhhhhhhhhhhhHhHHhhcCC-CceeehhHHHHHhhhhHHHHHHHHHHHHhC
Q 007665 118 KVWQMCLYICIGANSQNFANTGSLVTCVKNFP-ESRGMMLGLMKGFVGLSGAVFTQIYLAIYG 179 (594)
Q Consensus 118 ~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp-~~rg~~~gi~~~~~glg~~i~~~l~~~l~~ 179 (594)
+...+-+.-++.|++.+. ..+-.+++-...| ++..++.+...++.-+|-.+++.++..+.+
T Consensus 93 sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs 154 (412)
T PF01770_consen 93 SVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVS 154 (412)
T ss_pred cHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888999999998876 4455566666666 467888999888887777777766665443
No 187
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=98.99 E-value=3e-08 Score=102.94 Aligned_cols=138 Identities=15% Similarity=0.101 Sum_probs=109.9
Q ss_pred hhHHHHHHHhCCCHhHHHHHHHHHhhhhh-hhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHH
Q 007665 46 TYSKEIKSTLGYDQTTLNLLSTCKDLGAN-VGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIAKPKVWQMCL 124 (594)
Q Consensus 46 ~~~~~l~~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~~~~~~l~~ 124 (594)
.+.|.+.+++|.+..+++.+.....+..+ ..++.+++.||+|+|+.+.++.+...+..++..++ ++.+.++.
T Consensus 226 ~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~-------~~~~~~~~ 298 (382)
T TIGR00902 226 GFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAI-------EAFPLIFL 298 (382)
T ss_pred HHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhH-------hhHHHHHH
Confidence 34555556799999999985555555554 47799999999999999999999999888776544 67888888
Q ss_pred HHHHHhhhhhhhhhhhHhHHhhcCC-CceeehhHHHH-HhhhhHHHHHHHHHHHHhCCChHHHHHHHHH
Q 007665 125 YICIGANSQNFANTGSLVTCVKNFP-ESRGMMLGLMK-GFVGLSGAVFTQIYLAIYGNDAKSMILLIAW 191 (594)
Q Consensus 125 ~r~l~G~g~g~~~~~~~~~i~~~fp-~~rg~~~gi~~-~~~glg~~i~~~l~~~l~~~~~~~~~~~~~~ 191 (594)
..+++|+..+...+....++.+. | ++|++..++++ ...++|..+++.+.+.+.+..+...++..+.
T Consensus 299 ~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~~~~~~~~~ 366 (382)
T TIGR00902 299 LQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGAGTFVFMAI 366 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 99999999999999999999988 7 47899999975 5778999999999988887654433333333
No 188
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.99 E-value=1.9e-09 Score=94.05 Aligned_cols=135 Identities=14% Similarity=0.200 Sum_probs=105.4
Q ss_pred hHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhcc-CcchHHHHHHHHHHHhhhhHHHHHHHH
Q 007665 392 FVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAFP-KPGSVYVASLLVGFSYGAQLTLLFIII 470 (594)
Q Consensus 392 ~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~l~G~~~g~~~~~~~~~~ 470 (594)
..+...++..++.++.|++.||++||+ .+..+..+..++.+..... +.+...+..++.|++.+...+....++
T Consensus 3 ~~~~~~~~~~~~~~~~g~~~d~~g~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 76 (141)
T TIGR00880 3 LLAGYALGQLIYSPLSGLLTDRFGRKP------VLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALI 76 (141)
T ss_pred EEEeehhHHHHHHhhHHHHHhhcchhH------HHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 345667888899999999999998873 4455555555555544433 334566677889999998888999999
Q ss_pred HHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhhcccccCCCcccccccchHHHHHHHHHHHHHHH
Q 007665 471 SELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGA 550 (594)
Q Consensus 471 ~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~ 550 (594)
.|.+|++++++..+..+....++..+ +|.+.+.+.+. .+|+..+++.+.+.+++.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~ 131 (141)
T TIGR00880 77 ADIYPPEERGVALGLMSAGIALGPLL-GPPLGGVLAQF------------------------LGWRAPFLFLAILALAAF 131 (141)
T ss_pred HHHCChhhhhHHHHHHHHhHHHHHHH-hHHhHHHHhcc------------------------cchHHHHHHHHHHHHHHH
Confidence 99999999999999999999999976 89899988766 578889988888777776
Q ss_pred HHHHHHH
Q 007665 551 LITFILV 557 (594)
Q Consensus 551 ~~~~~~~ 557 (594)
+....+.
T Consensus 132 ~~~~~~~ 138 (141)
T TIGR00880 132 ILLAFLL 138 (141)
T ss_pred HHHhhcC
Confidence 6665543
No 189
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.98 E-value=1.2e-07 Score=93.41 Aligned_cols=86 Identities=12% Similarity=0.047 Sum_probs=66.4
Q ss_pred HHHHHhCCCHhHHHHHHHHHhhhh-hhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHH
Q 007665 50 EIKSTLGYDQTTLNLLSTCKDLGA-NVGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIAKPKVWQMCLYICI 128 (594)
Q Consensus 50 ~l~~~~~~s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~~~~~~l~~~r~l 128 (594)
.+-+++|++..|++.+........ +++++.|.++||+|||+.-++-.++..++++. ... +++..++++|++
T Consensus 59 ~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~------k~~--~~~~~L~~GRvl 130 (354)
T PF05631_consen 59 ALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLT------KHS--SNYPVLLLGRVL 130 (354)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHH------Hhc--cccHHHHHHHHH
Confidence 444789999999999665555554 77999999999999999988866665555432 222 689999999999
Q ss_pred HhhhhhhhhhhhHhH
Q 007665 129 GANSQNFANTGSLVT 143 (594)
Q Consensus 129 ~G~g~g~~~~~~~~~ 143 (594)
.|++....+.+-=+.
T Consensus 131 gGiaTSLLfS~FEsW 145 (354)
T PF05631_consen 131 GGIATSLLFSAFESW 145 (354)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999887654443
No 190
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.98 E-value=2.4e-09 Score=111.71 Aligned_cols=172 Identities=13% Similarity=0.104 Sum_probs=114.7
Q ss_pred hHHHHHHHHHHHhhccccceeeccHHHHHH-hcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHH
Q 007665 351 SIDMLILFLATFCGLGCSLTAIDNLGQIGE-SLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAIS 429 (594)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~ 429 (594)
||.+|.+....++.+.....+...+|.+.+ +.|+++.+.+...++..++..+++++.|+++||+|||+ .+..+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~------~~~~~ 74 (396)
T TIGR00882 1 NTNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKK------HLLWI 74 (396)
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHH------HHHHH
Confidence 577888876666665554455556777766 46999999999999999999999999999999999884 22222
Q ss_pred HHHHHHHHH---HHhccC-----c-chHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhh
Q 007665 430 LILSAVGDV---LIAFPK-----P-GSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVI 500 (594)
Q Consensus 430 ~~~~~i~~~---~~~~~~-----~-~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~ 500 (594)
.+..+++.. .+.... . ....+..++.|++.+...+....+..+.- ++++..+|......++|..+ +|.
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~-g~~ 151 (396)
T TIGR00882 75 ISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVS--RNSNFEYGKARMFGCVGWAL-CAS 151 (396)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhh--hhcccccchhhhhcccHHHH-HHH
Confidence 222222211 111111 0 11222345566666666666666666543 33456778887888888865 898
Q ss_pred HHHhhhhHHHHHhhhhhhcccccCCCcccccccchHHHHHHHHHHHHHHHHHHHHH
Q 007665 501 VVGRLYDREAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFIL 556 (594)
Q Consensus 501 ~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 556 (594)
+.|.+.+. +|+..|++.+++.++..++.+..
T Consensus 152 ~~g~l~~~-------------------------~~~~~f~~~~~~~~~~~~~~~~~ 182 (396)
T TIGR00882 152 IAGILFSI-------------------------DPQIVFWLGSGFALILMLLLMFA 182 (396)
T ss_pred HHhhhhcc-------------------------CchHHHHHHHHHHHHHHHHHHHh
Confidence 88877543 58899998888777776555443
No 191
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.96 E-value=1.7e-09 Score=106.14 Aligned_cols=150 Identities=19% Similarity=0.208 Sum_probs=131.2
Q ss_pred cCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhccC-cchHHHHHHHHHHHhh
Q 007665 382 LGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAFPK-PGSVYVASLLVGFSYG 460 (594)
Q Consensus 382 ~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~l~G~~~g 460 (594)
..-++.+.|++++..++.+.+.+++.|.+.||+|+| ..+.+++..+..+.+++.+.+ .+.+.+.-.+.|+|.+
T Consensus 101 ~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~------ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA 174 (464)
T KOG3764|consen 101 LDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYK------IPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSA 174 (464)
T ss_pred ccccccchhHHHHHHHHHHHHhcccchhhHHHhccc------cHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHH
Confidence 345667889999999999999999999999999988 456778888888888877765 4677888999999999
Q ss_pred hhHHHHHHHHHHhccCCc-cccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhhcccccCCCcccccccchHHHH
Q 007665 461 AQLTLLFIIISELFGLKY-YSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGMTRAMVKDLTCIGRQCYRLSF 539 (594)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~-~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 539 (594)
.......++++|.||.++ |+++.|....+..+|-.+ ||+..|.+||. .++..+|
T Consensus 175 ~~~tsglamlAd~f~~d~er~~vmGialgfislG~lv-gPpfGGilYe~------------------------~Gk~aPF 229 (464)
T KOG3764|consen 175 FADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLV-GPPFGGILYEF------------------------AGKSAPF 229 (464)
T ss_pred HHHhhhHHHHHHHcccchhhhHHHHHHHHHHhcccee-cCCcccchHhh------------------------cCCcCcH
Confidence 999999999999999776 699999999999999976 99999999998 7899999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhh
Q 007665 540 TILAGVNIFGALITFILVMRTRR 562 (594)
Q Consensus 540 ~~~~~~~~~~~~~~~~~~~~~~~ 562 (594)
.++++++++..++-+++.+.++.
T Consensus 230 lVL~~v~Lld~~L~l~vi~p~~~ 252 (464)
T KOG3764|consen 230 LVLAIVLLLDGALQLLVIEPTEM 252 (464)
T ss_pred HHHHHHHHHHHHHHHheeCcccc
Confidence 99999999999888887766544
No 192
>PTZ00207 hypothetical protein; Provisional
Probab=98.92 E-value=9.3e-09 Score=110.17 Aligned_cols=152 Identities=13% Similarity=0.125 Sum_probs=112.3
Q ss_pred ccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhcc-------Cc
Q 007665 373 DNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAFP-------KP 445 (594)
Q Consensus 373 ~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~~-------~~ 445 (594)
...+.+.+++|++..+.+.+.++... .....+..|++.||+|+| .++.++.++..++.++.... +.
T Consensus 48 v~s~~L~~~lgls~~~l~~i~svg~~-~g~~~lp~G~L~Dr~G~R------~vllig~ll~~iG~ll~ala~~~~i~~s~ 120 (591)
T PTZ00207 48 LISGAMQARYNLTQRDLSTITTVGIA-VGYFLLPYSFIYDYLGPR------PIFVLSMTVFCLGTLLFALTFQEVIEGSV 120 (591)
T ss_pred HHHHHHHHHhCcCHHHHHHHHHHHHH-HHHHHHHHHHHHHHhCcH------HHHHHHHHHHHHHHHHHHHHhcccccCcH
Confidence 34566667889999888887766333 345666789999999987 56778888888887766653 23
Q ss_pred chHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhhcccccCC
Q 007665 446 GSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGMTRAMVK 525 (594)
Q Consensus 446 ~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~ 525 (594)
+.+++..++.|++.+...+.....+.+.|| ++||.+.|+.....++|+.+++++..+++.+
T Consensus 121 ~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~------------------ 181 (591)
T PTZ00207 121 VRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFSD------------------ 181 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------
Confidence 456667778898888877777888889996 7889999999999999998766655554432
Q ss_pred CcccccccchHHHHHHHHHHHHHHHHHHHHHHh
Q 007665 526 DLTCIGRQCYRLSFTILAGVNIFGALITFILVM 558 (594)
Q Consensus 526 ~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 558 (594)
+++..|++.+++.++..++.+.+.+
T Consensus 182 --------~~~~~fl~l~vl~~vv~ll~~~~vr 206 (591)
T PTZ00207 182 --------NTSAYFFFLMSFALVVGILAIVFMR 206 (591)
T ss_pred --------hHHHHHHHHHHHHHHHHHHHHhhee
Confidence 2667778777777776666665543
No 193
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=98.92 E-value=3.5e-08 Score=102.41 Aligned_cols=137 Identities=17% Similarity=0.028 Sum_probs=94.0
Q ss_pred hhchhhhHHHH-HHHhCCCHhHHHHHHHHHhhhh-hhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhccCChh
Q 007665 41 TYLFGTYSKEI-KSTLGYDQTTLNLLSTCKDLGA-NVGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIAKPK 118 (594)
Q Consensus 41 ~~~~~~~~~~l-~~~~~~s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~~~ 118 (594)
.+.+..+.|.+ ++++|.+..+.+++.....+.. +..++.|++.||+|||+.+..+..+..+........+ ...++
T Consensus 235 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 311 (394)
T TIGR00883 235 FYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMAL---LDSGS 311 (394)
T ss_pred HHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHH---hcCCc
Confidence 34444455555 4788999999888555444444 5588999999999999988765554443322111111 11134
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhHhHHhhcCCC-ceeehhHHH-HHhhhhHHHHHHHHHHHHhCC
Q 007665 119 VWQMCLYICIGANSQNFANTGSLVTCVKNFPE-SRGMMLGLM-KGFVGLSGAVFTQIYLAIYGN 180 (594)
Q Consensus 119 ~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp~-~rg~~~gi~-~~~~glg~~i~~~l~~~l~~~ 180 (594)
.+.++...++.|++.+...+.....+.|.+|+ +|+++.|+. ..+..+|+.++|.+.+.+.+.
T Consensus 312 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~ 375 (394)
T TIGR00883 312 FTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAM 375 (394)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHH
Confidence 55566677888888888888888999999985 699999984 455557777888887777664
No 194
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.92 E-value=7.4e-09 Score=108.29 Aligned_cols=128 Identities=16% Similarity=0.068 Sum_probs=106.0
Q ss_pred ccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhcc----CcchH
Q 007665 373 DNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAFP----KPGSV 448 (594)
Q Consensus 373 ~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~~~ 448 (594)
...|.+.++.|+++.+.++..+...++..++.+..|++.||+||| ..+..+.++.+++.++.... +.+.+
T Consensus 24 ~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r------~~~~~g~~l~~~g~~l~~~~~~~~~~~~~ 97 (410)
T TIGR00885 24 PMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYK------AGILLGLFLYALGAFLFWPAAEIMNYTLF 97 (410)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCch------HHHHHHHHHHHHHHHHHHHHHhhccHHHH
Confidence 445777778899999999999999999999999999999999988 46677777777776664321 23445
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhh
Q 007665 449 YVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYD 507 (594)
Q Consensus 449 ~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~ 507 (594)
.+..++.|++.|...+....++.+..+++++++..++.+..+++|..+ +|.+.+.+..
T Consensus 98 l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~-g~~i~~~l~~ 155 (410)
T TIGR00885 98 LVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSII-GMVVAQQLIL 155 (410)
T ss_pred HHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHh
Confidence 667788999999999888888989999899999999999999999975 8988887753
No 195
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.90 E-value=1.1e-08 Score=105.03 Aligned_cols=149 Identities=15% Similarity=0.114 Sum_probs=114.6
Q ss_pred eeccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhccCcchHHH
Q 007665 371 AIDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAFPKPGSVYV 450 (594)
Q Consensus 371 ~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 450 (594)
....+|.+.+++|+|+.+.++..+.+.++..++.+..|+++||++||+ .+..+.++.+++.+.....+...+++
T Consensus 19 ~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~------~~~~~~~~~~~~~~~~~~~~~~~l~~ 92 (355)
T TIGR00896 19 VGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEER------SVAAGLLLIAAGILIRSAPGTALLFA 92 (355)
T ss_pred CcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchH------HHHHHHHHHHHHHHHHHhccHHHHHH
Confidence 345678888999999999999999999999999999999999999874 44555555555555443333455566
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhhcccccCCCcccc
Q 007665 451 ASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGMTRAMVKDLTCI 530 (594)
Q Consensus 451 ~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (594)
..++.|++.+...+..+.++.+.++ ++++++.|..+....+|..+ ++.+.+.+.+..
T Consensus 93 ~~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i-~~~~~~~l~~~~--------------------- 149 (355)
T TIGR00896 93 GTALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAAL-AAAATVPLAQHS--------------------- 149 (355)
T ss_pred HHHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHH-HHHHHHHHHHhh---------------------
Confidence 6788899888877778888888886 78999999999998998875 887888776651
Q ss_pred cccchHHHHHHHHHHHHHH
Q 007665 531 GRQCYRLSFTILAGVNIFG 549 (594)
Q Consensus 531 ~~~~~~~~f~~~~~~~~~~ 549 (594)
...|+..|.+.+++.++.
T Consensus 150 -~~~w~~~f~~~~~~~~~~ 167 (355)
T TIGR00896 150 -GGHWQQALAWWALPALLA 167 (355)
T ss_pred -hhhHHHHHHHHHHHHHHH
Confidence 023888888776654443
No 196
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.88 E-value=2.9e-08 Score=99.04 Aligned_cols=146 Identities=16% Similarity=0.101 Sum_probs=107.4
Q ss_pred HHHHHHhhhhhhchhhhHHHH-HHHhCCCHhHHHHH-HHHHhhhhhhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHH
Q 007665 31 SFLIMAGAGATYLFGTYSKEI-KSTLGYDQTTLNLL-STCKDLGANVGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWL 108 (594)
Q Consensus 31 ~~l~~~~~g~~~~~~~~~~~l-~~~~~~s~~~~~~~-~~~~~~~~~~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~ 108 (594)
+++...+.|..-.++...|.+ +++|+.+..+.+.+ ..+..++.+..+++|+++||+|.+|++......++++..+..+
T Consensus 224 sllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~ 303 (417)
T COG2223 224 SLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSL 303 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHc
Confidence 334555666666677666664 78999999999884 5556677788999999999999999999988888887766544
Q ss_pred HHhhccCChhH----HHHHHHHHHHhhhhhhhhhhhHhHHhhcCCCceeehhHHHHHhhhhHHHHHHHHHHHHhCC
Q 007665 109 AVMKKIAKPKV----WQMCLYICIGANSQNFANTGSLVTCVKNFPESRGMMLGLMKGFVGLSGAVFTQIYLAIYGN 180 (594)
Q Consensus 109 a~~~~~~~~~~----~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp~~rg~~~gi~~~~~glg~~i~~~l~~~l~~~ 180 (594)
........++. ..++...++.|+|.|.. ...+...||++-|.+.|+..+..++|+...|...+...+.
T Consensus 304 ~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsv----fk~Ip~if~~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~ 375 (417)
T COG2223 304 FLTGFGHGGSFVVFVAVFLALFVFAGLGNGSV----FKMIPVIFPKETGAVTGIVGAIGGLGGFFLPLAFGVSLDL 375 (417)
T ss_pred cccccccCcchHHHHHHHHHHHHHhccCcchh----eeechHHHHhhhhHHHHHHHHhccccccchhHHHHHHHHh
Confidence 32211111222 23345667777777754 5888889999999999999999999998888777666554
No 197
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.86 E-value=2.2e-08 Score=107.26 Aligned_cols=156 Identities=13% Similarity=0.020 Sum_probs=114.2
Q ss_pred ceeeccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHH-----hhhccCCchHHHHHHHHHHHHHHHHHhcc
Q 007665 369 LTAIDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEII-----LLKYKVPRPLIMAISLILSAVGDVLIAFP 443 (594)
Q Consensus 369 ~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~-----g~r~~~~~~~~~~~~~~~~~i~~~~~~~~ 443 (594)
......+|.++++.|.|..+.+.+ +..+... ++++++|.++||+ |||+ ..+..+.++.+++...+...
T Consensus 29 ~~~~~~l~~~l~~~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr-----~~ll~~~i~~~~~~~~~a~~ 101 (491)
T PRK11010 29 ALTSGTLQAWMTVENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRR-----GWLLATQLLLLVAIAAMGFL 101 (491)
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCch-----HHHHHHHHHHHHHHHHHHHc
Confidence 334455788888889988888776 3233332 6889999999999 7653 34555666665555544332
Q ss_pred C----cchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhhc
Q 007665 444 K----PGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGM 519 (594)
Q Consensus 444 ~----~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~ 519 (594)
. .+.+.+..++.+++.+...+...++..|.+++++++++.++...+..+|..+ ++.+.+.+.+.
T Consensus 102 ~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~ll-g~~l~~~l~~~----------- 169 (491)
T PRK11010 102 EPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLV-SGGLALWLADR----------- 169 (491)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHH-HHHHHHHHHhc-----------
Confidence 1 2345556678888888888888899999999999999999999999999865 88788888773
Q ss_pred ccccCCCcccccccchHHHHHHHHHHHHHHHHHHHH
Q 007665 520 TRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFI 555 (594)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~ 555 (594)
..+|+..|++.+++.++..+..++
T Consensus 170 ------------~~GWr~~f~i~a~l~ll~~l~~~~ 193 (491)
T PRK11010 170 ------------YLGWQGMYWLMAALLIPCIIATLL 193 (491)
T ss_pred ------------ccCHHHHHHHHHHHHHHHHHHHHh
Confidence 157999999998887776555443
No 198
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.85 E-value=2.8e-08 Score=102.13 Aligned_cols=163 Identities=13% Similarity=-0.004 Sum_probs=110.7
Q ss_pred ccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHH-----hhhccCCchHHHHHHHHHHHHHHHHHhccC---
Q 007665 373 DNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEII-----LLKYKVPRPLIMAISLILSAVGDVLIAFPK--- 444 (594)
Q Consensus 373 ~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~-----g~r~~~~~~~~~~~~~~~~~i~~~~~~~~~--- 444 (594)
...|.+.++.|+|..+.+..... .+...+ ++++|+++||+ |||+ .++..+.++.++....+.+..
T Consensus 9 ~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~-----~~l~~~~~~~~~~~~~l~~~~~~~ 81 (356)
T TIGR00901 9 NTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRR-----SWLVLTQVLLLSLLLILSFLVPST 81 (356)
T ss_pred hHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccH-----HHHHHHHHHHHHHHHHHHcCCcch
Confidence 34678889999999988888544 444444 88999999998 4442 334455555555544443332
Q ss_pred -cchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhhccccc
Q 007665 445 -PGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGMTRAM 523 (594)
Q Consensus 445 -~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~ 523 (594)
.+.+....++.+++.+...+...+++.|.+|+|+|+.+.|....+..+|..+ ++.+.+.+.+.....+
T Consensus 82 ~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~-~~~l~~~l~~~~g~~~---------- 150 (356)
T TIGR00901 82 DLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLL-SGSLALVLASPEFANT---------- 150 (356)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHH-HHHHHHHHhhhccccc----------
Confidence 1223444456667777777778889999999999999999999999999875 8888887776521000
Q ss_pred CCCcccccccchHHHHHHHHHHHHHHHHHHHHHHhh
Q 007665 524 VKDLTCIGRQCYRLSFTILAGVNIFGALITFILVMR 559 (594)
Q Consensus 524 ~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 559 (594)
....+|+..|++.+++.+++.+..++..+|
T Consensus 151 ------~~~~~wr~~f~i~ai~~l~~~~~~~~~~~e 180 (356)
T TIGR00901 151 ------GLITLWGYIFFWTALLILPGLLVTLFLAKE 180 (356)
T ss_pred ------ccccccHHHHHHHHHHHHHHHHHHHHhccC
Confidence 001349999998888777766554444444
No 199
>TIGR00898 2A0119 cation transport protein.
Probab=98.85 E-value=7.7e-09 Score=111.69 Aligned_cols=147 Identities=18% Similarity=0.176 Sum_probs=114.0
Q ss_pred HHHHHHhcCCC---CCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhcc-CcchHHH
Q 007665 375 LGQIGESLGYP---QHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAFP-KPGSVYV 450 (594)
Q Consensus 375 ~~~~~~~~g~s---~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~ 450 (594)
.+.+.++.+++ +.+.++..+++.++..+|.++.|+++||+|||+ .+.++.++..++.++.... +.+.+++
T Consensus 112 ~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~------~~~~~~~~~~i~~~~~~~~~~~~~~~~ 185 (505)
T TIGR00898 112 SSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKK------VLLLSTLVTAVSGVLTAFSPNYTVFLV 185 (505)
T ss_pred cccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchH------HHHHHHHHHHHHHHHHHHcccHHHHHH
Confidence 34555667887 778899999999999999999999999999883 5566666666665555443 3456677
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhhcccccCCCcccc
Q 007665 451 ASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGMTRAMVKDLTCI 530 (594)
Q Consensus 451 ~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (594)
..++.|++.+...+....++.|.+|+++|+.+.++...+..+|.++ +|.+. .+..
T Consensus 186 ~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~-~~~~~-~~~~----------------------- 240 (505)
T TIGR00898 186 FRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVL-LPLVA-YFIP----------------------- 240 (505)
T ss_pred HHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHH-HHHHH-HHhh-----------------------
Confidence 7889999999999999999999999999999999988888888754 66443 3322
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHH
Q 007665 531 GRQCYRLSFTILAGVNIFGALITFI 555 (594)
Q Consensus 531 ~~~~~~~~f~~~~~~~~~~~~~~~~ 555 (594)
.|+..|++.++..++..+..++
T Consensus 241 ---~wr~~~~~~~i~~~~~~~~~~~ 262 (505)
T TIGR00898 241 ---DWRWLQLAVSLPTFLFFLLSWF 262 (505)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHh
Confidence 2888888888877776665533
No 200
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.84 E-value=2.5e-08 Score=104.33 Aligned_cols=150 Identities=16% Similarity=0.063 Sum_probs=112.0
Q ss_pred eccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHH-----hhhccCCchHHHHHHHHHHHHHHHHHhccC--
Q 007665 372 IDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEII-----LLKYKVPRPLIMAISLILSAVGDVLIAFPK-- 444 (594)
Q Consensus 372 ~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~-----g~r~~~~~~~~~~~~~~~~~i~~~~~~~~~-- 444 (594)
...+|.++++.|+|..+.+++..+... .+.++++|+++||+ |||+ ..+..+.++.+++...+....
T Consensus 19 ~~~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr-----~~l~~~~~~~~l~~~~l~~~~~~ 91 (402)
T PRK11902 19 SGTLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRR-----GWLLLTQVGLAASIAAMAFCPPH 91 (402)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcch-----hHHHHHHHHHHHHHHHHHhcCcc
Confidence 455789999999999999988665554 58899999999999 6553 345555566655555544332
Q ss_pred --cchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhhcccc
Q 007665 445 --PGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGMTRA 522 (594)
Q Consensus 445 --~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~ 522 (594)
.+.+++..++.+++.....+...+++.|.+++++|+++.++...+..+|..+ ++.+.+.+.+.
T Consensus 92 ~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~-g~~l~~~l~~~-------------- 156 (402)
T PRK11902 92 AALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLV-SGGLALWLADR-------------- 156 (402)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHH-HhHHHHHHHhc--------------
Confidence 1234444456677777777888899999999999999999999988898865 77788777764
Q ss_pred cCCCcccccccchHHHHHHHHHHHHHHHHH
Q 007665 523 MVKDLTCIGRQCYRLSFTILAGVNIFGALI 552 (594)
Q Consensus 523 ~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~ 552 (594)
..+|+..|++.+++.++..+.
T Consensus 157 ---------~~gw~~~f~i~a~~~l~~~l~ 177 (402)
T PRK11902 157 ---------VLGWGNTYLLMAGLMLAGALT 177 (402)
T ss_pred ---------ccCHHHHHHHHHHHHHHHHHH
Confidence 147999999988877665543
No 201
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.84 E-value=2.3e-08 Score=107.79 Aligned_cols=116 Identities=18% Similarity=0.248 Sum_probs=90.9
Q ss_pred CCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhccC-------cchHHHHHHHHH
Q 007665 384 YPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAFPK-------PGSVYVASLLVG 456 (594)
Q Consensus 384 ~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~~~-------~~~~~~~~~l~G 456 (594)
.++.+.+.+.+...++..++.+++|+++||+|||+ .+..+.++..++.++..... ...+++..++.|
T Consensus 53 ~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~------~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G 126 (502)
T TIGR00887 53 LPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKR------VYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLG 126 (502)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHH------HHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHH
Confidence 34445677889999999999999999999999883 45555555555544433321 234667788999
Q ss_pred HHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhh
Q 007665 457 FSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLY 506 (594)
Q Consensus 457 ~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~ 506 (594)
++.|...+..+.+++|.+|+++||++.++......+|..+ ++.+...+.
T Consensus 127 ~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~-g~~~~~~~~ 175 (502)
T TIGR00887 127 VGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILA-GAIVALIVL 175 (502)
T ss_pred HHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 9999999999999999999999999999999999998865 776665543
No 202
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=98.83 E-value=2.7e-07 Score=95.82 Aligned_cols=130 Identities=12% Similarity=0.024 Sum_probs=99.4
Q ss_pred hHHHHHHHhCCCHhHHHHHHHHHhhhhh-hhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHH
Q 007665 47 YSKEIKSTLGYDQTTLNLLSTCKDLGAN-VGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIAKPKVWQMCLY 125 (594)
Q Consensus 47 ~~~~l~~~~~~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~~~~~~l~~~ 125 (594)
+.|.+.++.|.+..+.+.+.....+..+ ..++.|++.||+|+|+++..+.+...++.++.+.+ ++.+.+++.
T Consensus 227 ~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~-------~~~~~~~~~ 299 (382)
T PRK11128 227 FSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGST-------TALPWLIVI 299 (382)
T ss_pred HHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhh-------hhHHHHHHH
Confidence 3355556799999999985445444544 47899999999999999999888877776655333 567777888
Q ss_pred HHHHhhhhhhhhhhhHhHHhhcCCCceeehhHHHH-HhhhhHHHHHHHHHHHHhCCChH
Q 007665 126 ICIGANSQNFANTGSLVTCVKNFPESRGMMLGLMK-GFVGLSGAVFTQIYLAIYGNDAK 183 (594)
Q Consensus 126 r~l~G~g~g~~~~~~~~~i~~~fp~~rg~~~gi~~-~~~glg~~i~~~l~~~l~~~~~~ 183 (594)
.++.|++.+...+....++.+..+++++++.++.. ...++|..+++.+.+.+.+....
T Consensus 300 ~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~ 358 (382)
T PRK11128 300 QILHCGTFTVCHLAAMRYIAARPGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA 358 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH
Confidence 99999999988888888877775667788888875 55667778888888888776544
No 203
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.81 E-value=1.6e-08 Score=120.17 Aligned_cols=184 Identities=12% Similarity=0.090 Sum_probs=119.5
Q ss_pred HHhhchHHHHHHHHHHHhhccccceeeccHHHH----HH-hcCCCC-CcchhhHHHHhhhhhHhhhhhccccHHHhhhcc
Q 007665 346 LQALLSIDMLILFLATFCGLGCSLTAIDNLGQI----GE-SLGYPQ-HTINTFVSLVSIWNYFGRVFAGFVSEIILLKYK 419 (594)
Q Consensus 346 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~g~s~-~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~ 419 (594)
+.++++++|+.+++..++....-......+..+ .. +.+.++ ...++..+++.+...+..+++|+++||++||+.
T Consensus 5 ~~l~~~~~f~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~ 84 (1140)
T PRK06814 5 LYLMKSRRFAPLFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKL 84 (1140)
T ss_pred hhhhhccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHH
Confidence 346677777766666555433211111111111 11 111111 235666778889999999999999999998841
Q ss_pred CCchHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhh
Q 007665 420 VPRPLIMAISLILSAVGDVLIAFPKPGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNV 499 (594)
Q Consensus 420 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp 499 (594)
+ ..+.....+....+.+.....+.+.+++..++.|++.+...+...+++.+.++++++++++|+.+++.++|.++ ||
T Consensus 85 ~--~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~i-gp 161 (1140)
T PRK06814 85 A--KILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILL-GT 161 (1140)
T ss_pred H--HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHH-HH
Confidence 0 01111112222222222222445677888899999999999999999999999999999999999999999976 99
Q ss_pred hHHHhhhhHHHHHhhhhhhcccccCCCcccccccchHHHHHHHHHHHHHHHHHHHHH
Q 007665 500 IVVGRLYDREAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFIL 556 (594)
Q Consensus 500 ~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 556 (594)
.+.|.+.+. .+|+..|+...++.+++.++.+.+
T Consensus 162 ~l~g~l~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~ 194 (1140)
T PRK06814 162 IIGGLATIS------------------------GNFVILVALLMGIAVLGWLASLFI 194 (1140)
T ss_pred HHHHHHHhc------------------------cccHHHHHHHHHHHHHHHHHHhhC
Confidence 999999877 578888855555455444444333
No 204
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.81 E-value=4.9e-08 Score=99.63 Aligned_cols=149 Identities=19% Similarity=0.311 Sum_probs=127.0
Q ss_pred cCCCCCcchhhHHHHhhhhhHhhhhhccccHHH-hhhccCCchHHHHHHHHHHHHHHHHHhccC---cchHHHHHHHHHH
Q 007665 382 LGYPQHTINTFVSLVSIWNYFGRVFAGFVSEII-LLKYKVPRPLIMAISLILSAVGDVLIAFPK---PGSVYVASLLVGF 457 (594)
Q Consensus 382 ~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~~l~G~ 457 (594)
+|+|+.++.-.++.+...--+..+++||++||+ |+| ..+..+.++..++.+++...+ +..+++.++++++
T Consensus 56 Lg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~------~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~i 129 (498)
T COG3104 56 LGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTR------RTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIV 129 (498)
T ss_pred CCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchh------HHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHh
Confidence 459999999999999888889999999999995 555 467888899999999888663 5678888999999
Q ss_pred HhhhhHHHHHHHHHHhccCC--ccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhhcccccCCCcccccccch
Q 007665 458 SYGAQLTLLFIIISELFGLK--YYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGMTRAMVKDLTCIGRQCY 535 (594)
Q Consensus 458 ~~g~~~~~~~~~~~~~~~~~--~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 535 (594)
|.|..=+-..+++.|++|++ ++-..+++.+++.++|+++ +|.+.+++.+. .+|
T Consensus 130 G~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~-~p~i~~~~~~~------------------------~g~ 184 (498)
T COG3104 130 GTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLI-APIITGLLAIN------------------------YGW 184 (498)
T ss_pred ccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHH-HHHHHHHHHHh------------------------hCH
Confidence 99999999999999999855 4777888889999999975 99999999888 689
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhh
Q 007665 536 RLSFTILAGVNIFGALITFILVMRTR 561 (594)
Q Consensus 536 ~~~f~~~~~~~~~~~~~~~~~~~~~~ 561 (594)
+..|.+.++...++++..+..+++.+
T Consensus 185 ~~gF~~aavGm~~gl~~f~~~~r~~~ 210 (498)
T COG3104 185 HVGFGLAAVGMIIGLVIFLLGRRHVK 210 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHccchhc
Confidence 99999999999999888777765543
No 205
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.81 E-value=4e-08 Score=100.79 Aligned_cols=157 Identities=13% Similarity=0.117 Sum_probs=127.9
Q ss_pred HHHHHHhcCCCCCc-chhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhcc-CcchHHHHH
Q 007665 375 LGQIGESLGYPQHT-INTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAFP-KPGSVYVAS 452 (594)
Q Consensus 375 ~~~~~~~~g~s~~~-a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~ 452 (594)
.|++.+++|+++.+ .+.+.+++..+..+..+..|+++||+|-| +++..+.+...+...+..+. +...+.+.-
T Consensus 49 ~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K------~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R 122 (511)
T TIGR00806 49 TPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYK------PVLVLQALSFVCVWLLLLLGTSVWHMQLME 122 (511)
T ss_pred HHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCch------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46666789999999 99999999999999999999999999877 35556666555555555544 345677788
Q ss_pred HHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhhcccccCCCcccccc
Q 007665 453 LLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGMTRAMVKDLTCIGR 532 (594)
Q Consensus 453 ~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 (594)
++.|++.|..+ ....++...+|+++|+++.|+.+.+..+|.++ ++++.+.+... |-
T Consensus 123 ~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~I-a~~L~qll~s~----------------------gW 178 (511)
T TIGR00806 123 VFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFL-SSVLGQLLVTL----------------------GW 178 (511)
T ss_pred HHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhc----------------------Cc
Confidence 99999999999 88999999999999999999999999999986 78787774321 12
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 007665 533 QCYRLSFTILAGVNIFGALITFILVMRTR 561 (594)
Q Consensus 533 ~~~~~~f~~~~~~~~~~~~~~~~~~~~~~ 561 (594)
..|....++..+...+++++++++.+..|
T Consensus 179 r~y~~Ln~Isl~s~~~a~~~a~~LP~~~~ 207 (511)
T TIGR00806 179 ISYSTLNIISLVFMTFSVFLALFLKRPKR 207 (511)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhCCCCch
Confidence 46888888888888899999888875544
No 206
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.80 E-value=1.8e-08 Score=107.52 Aligned_cols=177 Identities=15% Similarity=0.101 Sum_probs=128.0
Q ss_pred HHhhchHHHHHHHHHHHhhccccceeeccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHH
Q 007665 346 LQALLSIDMLILFLATFCGLGCSLTAIDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLI 425 (594)
Q Consensus 346 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~ 425 (594)
+..+|+|.|..++.+..+......+...-.+-+..++.-|+...+++.....+...+..+++|.+.||+.||+ +
T Consensus 4 ~aplr~~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrr------i 77 (524)
T PF05977_consen 4 FAPLRNRNFRRLWIAQLISNLGDWMQTVALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRR------I 77 (524)
T ss_pred cccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchH------H
Confidence 4457888888887776554333222222334444455556677778888888888899999999999998874 3
Q ss_pred HHHHHHHHHHHHHH---Hh---ccCcchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhh
Q 007665 426 MAISLILSAVGDVL---IA---FPKPGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNV 499 (594)
Q Consensus 426 ~~~~~~~~~i~~~~---~~---~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp 499 (594)
+..+-++..+.... +. ..+++.+++..++.|.+.....|...+++.+++|+++...+.++..+..+++..+ ||
T Consensus 78 li~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~i-GP 156 (524)
T PF05977_consen 78 LILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARII-GP 156 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhc-cc
Confidence 44444333322211 11 1235667778899999999999999999999999999999999999999999876 99
Q ss_pred hHHHhhhhHHHHHhhhhhhcccccCCCcccccccchHHHHHHHHHHHHHHHHHH
Q 007665 500 IVVGRLYDREAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALIT 553 (594)
Q Consensus 500 ~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~ 553 (594)
.++|.++.. .+...+|.+.++..+++++..
T Consensus 157 algG~Lva~------------------------~G~~~~f~inalsfl~~i~~l 186 (524)
T PF05977_consen 157 ALGGILVAF------------------------FGAAAAFLINALSFLISILAL 186 (524)
T ss_pred hHHHHHHHH------------------------HHHHHHHHHHHHHHHHHHHHH
Confidence 999999877 467778888877666655443
No 207
>PRK09952 shikimate transporter; Provisional
Probab=98.80 E-value=4.5e-07 Score=95.93 Aligned_cols=131 Identities=14% Similarity=0.087 Sum_probs=87.0
Q ss_pred hhHHH-HHHHhCCCHhHHHHHHHHH-hhhhhhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHH
Q 007665 46 TYSKE-IKSTLGYDQTTLNLLSTCK-DLGANVGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIAKPKVWQMC 123 (594)
Q Consensus 46 ~~~~~-l~~~~~~s~~~~~~~~~~~-~~~~~~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~~~~~~l~ 123 (594)
.+.|. +++++|.+..+...+.... ..+.+..++.|+++||+|||+++..+.++..++.+....... ..++...++
T Consensus 271 ~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 347 (438)
T PRK09952 271 AFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALE---AQSIFWIVF 347 (438)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHH---cCChHHHHH
Confidence 33444 4678899887665543333 333455779999999999999998887765554433322211 112334444
Q ss_pred HHHHHHhhhhhhhhhhhHhHHhhcCCC-ceeehhHHHH-HhhhhHHHHHHHHHHHHhC
Q 007665 124 LYICIGANSQNFANTGSLVTCVKNFPE-SRGMMLGLMK-GFVGLSGAVFTQIYLAIYG 179 (594)
Q Consensus 124 ~~r~l~G~g~g~~~~~~~~~i~~~fp~-~rg~~~gi~~-~~~glg~~i~~~l~~~l~~ 179 (594)
+..++.|++.+...+....++.|.+|. .|+.+.|+.. .+..+|+.++|.+.+.+.+
T Consensus 348 ~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~ 405 (438)
T PRK09952 348 FSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVT 405 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455667777777777777888999984 6888888854 4445788888888888766
No 208
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.78 E-value=2.4e-08 Score=104.82 Aligned_cols=175 Identities=13% Similarity=0.060 Sum_probs=118.9
Q ss_pred eccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHH----HhhhccCCchHHHHHHHHHHHHHHHHHhccCc--
Q 007665 372 IDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEI----ILLKYKVPRPLIMAISLILSAVGDVLIAFPKP-- 445 (594)
Q Consensus 372 ~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr----~g~r~~~~~~~~~~~~~~~~~i~~~~~~~~~~-- 445 (594)
..++++|++++|.++...+.+..+..+.+.+..++.|+++|| +|||+ ..+..+.+...++++++.....
T Consensus 24 ~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRr-----p~il~g~~~~~~~l~ll~~~~~~~ 98 (477)
T TIGR01301 24 LSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRR-----PFIAAGAALVAFAVILIGFAADIG 98 (477)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChH-----HHHHHHHHHHHHHHHHHHhCchhh
Confidence 345677889999999999999999999999999999999995 88774 3344455555566555543221
Q ss_pred ----------------chHHHHHHHHHHHhhhhHHHHHHHHHHhccCCcc--ccccchhhccchhhhhhhhhhHHHhhhh
Q 007665 446 ----------------GSVYVASLLVGFSYGAQLTLLFIIISELFGLKYY--STLFNCGQLASPLGSYVLNVIVVGRLYD 507 (594)
Q Consensus 446 ----------------~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~--g~~~g~~~~~~~lg~~~~gp~~~g~l~~ 507 (594)
....+...+..++.+...+...++++|.+|++++ +.+++..+...++|+.+ |+.+.++...
T Consensus 99 ~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~il-g~~~g~~~~~ 177 (477)
T TIGR01301 99 HLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVL-GYAAGAYSGL 177 (477)
T ss_pred hhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhH
Confidence 1112223344557777778888999999998765 57889889999999975 8766554311
Q ss_pred HHHHHhhhhhhcccccCCCcccccccchHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 007665 508 REAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFILVMRTR 561 (594)
Q Consensus 508 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~ 561 (594)
...-+. +.+......| .+++..|++.+++.+++.++..+..+|..
T Consensus 178 ~~~~~~------~~~~~~~~~~---~~~~~~F~i~a~~l~i~~l~t~~~v~E~~ 222 (477)
T TIGR01301 178 YKIFPF------TKTEACGVSC---ANLKSCFLIDIILLAILTYIALSAVKENP 222 (477)
T ss_pred HHhccc------cccccccccc---chHHHHHHHHHHHHHHHHHHHeeeeeccC
Confidence 110000 0000000111 36899999999988888888887766654
No 209
>PRK10133 L-fucose transporter; Provisional
Probab=98.78 E-value=5.5e-08 Score=102.65 Aligned_cols=145 Identities=15% Similarity=0.040 Sum_probs=108.4
Q ss_pred HHHHHHHHhhccccceeeccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHH
Q 007665 355 LILFLATFCGLGCSLTAIDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSA 434 (594)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 434 (594)
..+.+.++.............|.+.+++++|+.+.++..+.+.++..++.+..|+++||+||| ..+..+.++.+
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r------~~l~~g~~~~~ 102 (438)
T PRK10133 29 ALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYK------AGIITGLFLYA 102 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH------HHHHHHHHHHH
Confidence 333343444333334444457788778899999999999999999999999999999999988 46677777777
Q ss_pred HHHHHHh---cc-CcchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhh
Q 007665 435 VGDVLIA---FP-KPGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLY 506 (594)
Q Consensus 435 i~~~~~~---~~-~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~ 506 (594)
++.+++. .. +...+.+..++.|++.+...+....++.+..+.+++....++......+|..+ +|.+.+.+.
T Consensus 103 ~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~-g~~~g~~l~ 177 (438)
T PRK10133 103 LGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAII-AVVFGQSLI 177 (438)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 7766542 22 33556677899999999999998888888766666656788888888888875 886665543
No 210
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.77 E-value=5.4e-08 Score=102.81 Aligned_cols=152 Identities=16% Similarity=0.088 Sum_probs=100.2
Q ss_pred HHHHHHhcC---CCCCc---chhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhccC-c--
Q 007665 375 LGQIGESLG---YPQHT---INTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAFPK-P-- 445 (594)
Q Consensus 375 ~~~~~~~~g---~s~~~---a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~~~-~-- 445 (594)
.|.+.++.+ .+..+ .+..++...++..+|.+++|+++||+||| ..+..+.++..++.++....+ .
T Consensus 45 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr------~~l~~~~~~~~~~~~~~~~~~~~~~ 118 (432)
T PRK10406 45 SLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRK------KSMLISVCMMCFGSLVIACLPGYET 118 (432)
T ss_pred HHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcH------HHHHHHHHHHHHHHHHHhhcCCchh
Confidence 455555653 33332 23344555666669999999999999998 456677777767666654432 1
Q ss_pred ------chHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhhc
Q 007665 446 ------GSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGM 519 (594)
Q Consensus 446 ------~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~ 519 (594)
..+.+..++.|++.|..++...+++.|.+|+++||...++.......|.++ ++.+...+.....+.+.
T Consensus 119 ~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~-~~~~~~~~~~~~~~~~~----- 192 (432)
T PRK10406 119 IGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLL-ALLVVVVLQQTLEDAEL----- 192 (432)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHH-HHHHHHHHHHhCCHHHH-----
Confidence 235667789999999999999999999999999999988877766666644 55443332211000000
Q ss_pred ccccCCCcccccccchHHHHHHHHHHHHHH
Q 007665 520 TRAMVKDLTCIGRQCYRLSFTILAGVNIFG 549 (594)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 549 (594)
...+||..|++.++..++.
T Consensus 193 -----------~~~gWr~~F~i~~~~~ll~ 211 (432)
T PRK10406 193 -----------REWGWRIPFALGAVLAVVA 211 (432)
T ss_pred -----------hccchHHHHHHHHHHHHHH
Confidence 0257999998866655443
No 211
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.74 E-value=6.6e-08 Score=94.70 Aligned_cols=115 Identities=23% Similarity=0.201 Sum_probs=94.0
Q ss_pred CCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhccCcc-hHHHHHHHHHHHhhhhH
Q 007665 385 PQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAFPKPG-SVYVASLLVGFSYGAQL 463 (594)
Q Consensus 385 s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~l~G~~~g~~~ 463 (594)
+..-+|++-+.+++...+..+.+|.++||+||| ..+.+|++..++..++....... .+.+.-++.|+..|. .
T Consensus 66 ~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRk------pvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgn-l 138 (451)
T KOG2615|consen 66 SVFYAGFLGSSFSILQFISSPLWGCLSDRYGRK------PVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGN-L 138 (451)
T ss_pred cchhhhhHhhHHHHHHHHhhhhhhhhhhhhCch------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCc-h
Confidence 334678888999999999999999999999988 56777777777766666655444 333346788887775 5
Q ss_pred HHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhh
Q 007665 464 TLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYD 507 (594)
Q Consensus 464 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~ 507 (594)
++.-++++|++++|+++.+++.+.+..++|-.+ ||.+.|++..
T Consensus 139 ~v~rAiisdV~sek~r~l~ms~v~~a~~lGfil-GPmIGgyla~ 181 (451)
T KOG2615|consen 139 SVIRAIISDVVSEKYRPLGMSLVGTAFGLGFIL-GPMIGGYLAQ 181 (451)
T ss_pred HHHHHHHHhhcChhhccceeeeeehhhhcchhh-cchhhhHHHh
Confidence 677899999999999999999999999999865 9999999876
No 212
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.72 E-value=2.8e-06 Score=87.60 Aligned_cols=99 Identities=9% Similarity=-0.021 Sum_probs=80.6
Q ss_pred HHHHHhhhhhhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHhhhhhhhhhhhHhHH
Q 007665 65 LSTCKDLGANVGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIAKPKVWQMCLYICIGANSQNFANTGSLVTC 144 (594)
Q Consensus 65 ~~~~~~~~~~~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i 144 (594)
....+....+++++.+.+.|+.|+|+.+.+|...+..-.+.... +|-+.+++...+.|+|.+..+..--.++
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~--------~N~y~~yfssallG~Gaallw~GqG~yl 127 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLF--------PNSYYLYFSSALLGFGAALLWTGQGGYL 127 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHh--------cchHHHHHHHHHhhhhHHheecccceeh
Confidence 45666677778999999999999999999988887766554322 5677888999999999999999999999
Q ss_pred hhcCC-CceeehhHHHHHhhhhHHHHHH
Q 007665 145 VKNFP-ESRGMMLGLMKGFVGLSGAVFT 171 (594)
Q Consensus 145 ~~~fp-~~rg~~~gi~~~~~glg~~i~~ 171 (594)
++... +++.+..++..+.+..+..+|+
T Consensus 128 t~~st~~tie~Nisi~Wai~~~~li~Gg 155 (461)
T KOG3098|consen 128 TSNSTRETIERNISIFWAIGQSSLIIGG 155 (461)
T ss_pred hhcCChhhHHHHHHHHHHHHHHHHHhhh
Confidence 99996 4688999998777766666655
No 213
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.72 E-value=2e-08 Score=110.32 Aligned_cols=175 Identities=13% Similarity=0.132 Sum_probs=122.2
Q ss_pred cHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhccC---------
Q 007665 374 NLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAFPK--------- 444 (594)
Q Consensus 374 ~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~~~--------- 444 (594)
.++++-++.++++.+.+++.+.+.++..++.++.+++.||.+||+ .+.++.++.+++.++...++
T Consensus 55 ~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~------~i~~g~ll~~lg~ll~alphf~~~~y~~~ 128 (633)
T TIGR00805 55 SLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPI------VIGIGCAIMGLGSFLLSLPHFLSGRYSYS 128 (633)
T ss_pred hchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcce------EEEecHHHHHHHHHHHhChHHhcCCcccc
Confidence 346666678999999999999999999999999999999998774 34555555555555443321
Q ss_pred -------------------------------------------cchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCcccc
Q 007665 445 -------------------------------------------PGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYST 481 (594)
Q Consensus 445 -------------------------------------------~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~ 481 (594)
...+++..++.|+|.+..++...+++.|.+++++++.
T Consensus 129 ~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~ 208 (633)
T TIGR00805 129 TTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPL 208 (633)
T ss_pred ccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHH
Confidence 1124567899999999999999999999999999999
Q ss_pred ccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhhcccccCCCcccccccchHHHHHHHHHHHHHHHHHHHHHH
Q 007665 482 LFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFILV 557 (594)
Q Consensus 482 ~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 557 (594)
..|+......+|..+ |+++.+.+.+...+-............++..+ .+.|+..|++.+++.++..+..+++.
T Consensus 209 ~~~i~~~~~~iG~~l-G~llgg~l~~~~~d~~~~~~~~~~l~~~dprW--iGaWwl~Fli~g~l~~l~~v~l~~~p 281 (633)
T TIGR00805 209 YIGILESIAVFGPAF-GYLLGSFCLQIYVDTGSVNTEDVILTPTDPRW--IGAWWIGFLICGGVALLTSIPFFFFP 281 (633)
T ss_pred HHHHHHHHHHhhhHH-HHHHHHHHHhcccccccCCCCCCCCCCCCccH--HHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 999999999999875 99888887754211000000000000011111 12478888888887777665544443
No 214
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.69 E-value=4.7e-08 Score=102.55 Aligned_cols=150 Identities=16% Similarity=0.187 Sum_probs=125.4
Q ss_pred hcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhcc---CcchHHHHHHHHHH
Q 007665 381 SLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAFP---KPGSVYVASLLVGF 457 (594)
Q Consensus 381 ~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~l~G~ 457 (594)
...+++.+-+++++.+..+.+++.+..|++.||+|.| .++..+.++.+++.++.... +.+.+.+.-++.|+
T Consensus 67 ~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r------~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl 140 (466)
T KOG2532|consen 67 EYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGAR------RVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGL 140 (466)
T ss_pred eecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCch------HHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHH
Confidence 3567888899999999999999999999999999987 35666666666666655432 23456777899999
Q ss_pred HhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhhcccccCCCcccccccchHH
Q 007665 458 SYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGMTRAMVKDLTCIGRQCYRL 537 (594)
Q Consensus 458 ~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 537 (594)
+.|..++....+.++..|++++++..++...+.++|.++ +-++.|.+-+. ..+|+.
T Consensus 141 ~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~-~mp~sg~lc~s-----------------------~~GW~s 196 (466)
T KOG2532|consen 141 GQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTII-TMPVSGLLCES-----------------------SLGWPS 196 (466)
T ss_pred HHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHH-HHHhHHHHhcc-----------------------CCCCch
Confidence 999999999999999999999999999999999999976 66799999877 378999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhh
Q 007665 538 SFTILAGVNIFGALITFILVMRT 560 (594)
Q Consensus 538 ~f~~~~~~~~~~~~~~~~~~~~~ 560 (594)
.|++.+++.++-.++-+.+..+.
T Consensus 197 ifY~~g~~g~i~~~~w~~~~~d~ 219 (466)
T KOG2532|consen 197 IFYVFGIVGLIWFILWFLFYSDS 219 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999888877766666543
No 215
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.68 E-value=8.8e-07 Score=88.87 Aligned_cols=120 Identities=8% Similarity=-0.047 Sum_probs=90.0
Q ss_pred HhCCCHhHHHHHHHHHhhhh-hhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHhhh
Q 007665 54 TLGYDQTTLNLLSTCKDLGA-NVGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIAKPKVWQMCLYICIGANS 132 (594)
Q Consensus 54 ~~~~s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~~~~~~l~~~r~l~G~g 132 (594)
.+|.+.++.++..+.+..+. +..++.+++.||+|+|+++.++.++..++.++.... ++... ...-++.|++
T Consensus 172 ~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~-------~~~~~-~~~~~l~g~~ 243 (310)
T TIGR01272 172 ALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALT-------HGYVA-MWFVLALGLF 243 (310)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHc-------CCHHH-HHHHHHHHHH
Confidence 36999999999655555555 558899999999999999988888777765443221 12222 2234478899
Q ss_pred hhhhhhhhHhHHhhcCCCceeehhHHHHHhhhhHHHHHHHHHHHHhCCCh
Q 007665 133 QNFANTGSLVTCVKNFPESRGMMLGLMKGFVGLSGAVFTQIYLAIYGNDA 182 (594)
Q Consensus 133 ~g~~~~~~~~~i~~~fp~~rg~~~gi~~~~~glg~~i~~~l~~~l~~~~~ 182 (594)
.+..+|...+...+.+|++.+.+.++... ..+|+++.|++.+.+.+..+
T Consensus 244 ~s~i~P~~~s~a~~~~~~~~~~asai~~~-~~~Gg~i~P~l~G~lad~~g 292 (310)
T TIGR01272 244 NSIMFPTIFSLALNALGRHTSQGSGILCL-AIVGGAIVPLLQGSLADCLG 292 (310)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhhHHHHHH-HHhcchHHHHHHHHHHHhcc
Confidence 99999999999899999877788888654 45899999998888877543
No 216
>PRK15075 citrate-proton symporter; Provisional
Probab=98.68 E-value=2e-07 Score=98.62 Aligned_cols=128 Identities=16% Similarity=0.138 Sum_probs=92.2
Q ss_pred eeccHHHHHHhcCCCCCcchhh-HHH-----HhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhccC
Q 007665 371 AIDNLGQIGESLGYPQHTINTF-VSL-----VSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAFPK 444 (594)
Q Consensus 371 ~~~~~~~~~~~~g~s~~~a~~~-~~~-----~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~~~ 444 (594)
+....|.+.++++.++.+.+.. .+. ..+...+|.++.|+++||+||| ..+..+.++.+++.++....+
T Consensus 34 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr------~~l~~~~~~~~~~~~l~~~~~ 107 (434)
T PRK15075 34 FGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRR------KGLIVTLSIMASGTLLIAFVP 107 (434)
T ss_pred HHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchH------HHHHHHHHHHHHHHHHHHhCC
Confidence 3445677778888777664433 222 2233357888999999999988 356667777777766665543
Q ss_pred c-c--------hHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhh
Q 007665 445 P-G--------SVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRL 505 (594)
Q Consensus 445 ~-~--------~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l 505 (594)
. . .+.+..++.|++.+..++....+++|.+|+++|++..++.....+++..+ ++.+.+.+
T Consensus 108 ~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~-g~~~g~~l 176 (434)
T PRK15075 108 GYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVF-AALLGYLL 176 (434)
T ss_pred cHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 3 2 24556788999999888888899999999999999999988888877654 66555444
No 217
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.65 E-value=1.4e-07 Score=102.37 Aligned_cols=146 Identities=18% Similarity=0.136 Sum_probs=116.3
Q ss_pred cCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhccC-cchHHHHHHHHHHHhh
Q 007665 382 LGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAFPK-PGSVYVASLLVGFSYG 460 (594)
Q Consensus 382 ~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~l~G~~~g 460 (594)
...+.....+..+++.++..+|.++.|.++||+||| .++..+.++..++.+...... .+.+.+.-++.|++.+
T Consensus 113 ~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk------~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~ 186 (521)
T KOG0255|consen 113 VCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRK------PVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGS 186 (521)
T ss_pred eeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccH------HHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhcc
Confidence 345666677788999999999999999999999988 467777777777666555544 4667778899999999
Q ss_pred hhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhhcccccCCCcccccccchHHHHH
Q 007665 461 AQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFT 540 (594)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 540 (594)
+.......+..|.+++++|+.+..+ ......++.+ +|...+++... ||+.++
T Consensus 187 ~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~-~~~~~a~~~~~--------------------------Wr~~~~ 238 (521)
T KOG0255|consen 187 GPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLM-LPAGAAYITRD--------------------------WRWLFW 238 (521)
T ss_pred chhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHH-HHHHHHHHHhh--------------------------HHHHHH
Confidence 9999999999999999999999999 6666666654 67787777654 999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhh
Q 007665 541 ILAGVNIFGALITFILVMRTRR 562 (594)
Q Consensus 541 ~~~~~~~~~~~~~~~~~~~~~~ 562 (594)
+.....++.++. .++.+|.++
T Consensus 239 ~~~~~~~~~~~~-~~l~~Es~r 259 (521)
T KOG0255|consen 239 IISIPSGLFLLL-WFLPPESPR 259 (521)
T ss_pred HHHHHHHHHHHH-HHccCcChH
Confidence 988888777666 444445444
No 218
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.62 E-value=3.1e-07 Score=99.18 Aligned_cols=140 Identities=19% Similarity=0.247 Sum_probs=111.2
Q ss_pred hhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhccC-cchHHHHHHHHHHHhhhhHHHHHH
Q 007665 390 NTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAFPK-PGSVYVASLLVGFSYGAQLTLLFI 468 (594)
Q Consensus 390 ~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~l~G~~~g~~~~~~~~ 468 (594)
+++.+...++..+|.++.|.++|++||| ..+.++.++..++.++..... ...+.+..++.|+|.|....+.|.
T Consensus 92 s~~~s~~~lga~~g~l~~g~l~d~~GRk------~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~pi 165 (513)
T KOG0254|consen 92 GLLTSILNLGALVGSLLAGRLGDRIGRK------KTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPV 165 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhH------HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchh
Confidence 7889999999999999999999999998 466777777777777766554 567888899999999999999999
Q ss_pred HHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhhcccccCCCcccccccchHHHHHHHHHHHHH
Q 007665 469 IISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIF 548 (594)
Q Consensus 469 ~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~ 548 (594)
+.+|..|++.||...+.......+|..+ + ++.+...+.. ..+||..+.+..+.+++
T Consensus 166 y~sEiap~~~RG~l~~~~~l~~~~Gi~~-~-~~~~~~~~~~----------------------~~~Wr~~~~~~~i~~~~ 221 (513)
T KOG0254|consen 166 YISEIAPAHIRGTLVSLYQLFITIGILL-G-YCINYGTSKV----------------------YAGWRIPLGLALIPAVI 221 (513)
T ss_pred hHhhcCChhhhHHHHHHHHHHHHHHHHH-H-HHHhhhhccC----------------------CccHHHHHHHHHHHHHH
Confidence 9999999999999999998888877643 5 4555555430 03699888877777777
Q ss_pred HHHHHHHHHhhh
Q 007665 549 GALITFILVMRT 560 (594)
Q Consensus 549 ~~~~~~~~~~~~ 560 (594)
-.+. .+..+++
T Consensus 222 ~~~~-~~~~pes 232 (513)
T KOG0254|consen 222 LALG-MLFLPES 232 (513)
T ss_pred HHHH-HHhCCCC
Confidence 6666 4444443
No 219
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.61 E-value=2.5e-06 Score=90.23 Aligned_cols=147 Identities=13% Similarity=0.053 Sum_probs=108.6
Q ss_pred HHHhhhhhhchhhhHHHHHHHhCCCHhHHHHHHHHHhhhh-hhhhhhhhhhcccCch--HHHHHHHHHHHHHHHHHHHHH
Q 007665 34 IMAGAGATYLFGTYSKEIKSTLGYDQTTLNLLSTCKDLGA-NVGVLSGLLAEVTPPW--LVLLVGSAMNFGGYFMIWLAV 110 (594)
Q Consensus 34 ~~~~~g~~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr~G~r--~v~~~g~~l~~ig~~l~~~a~ 110 (594)
.....|....++.......+++|++..++..+.....+.+ +.+.++|++.||+|.| +++++++++..+-.+...+.+
T Consensus 291 ~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~ 370 (477)
T PF11700_consen 291 FLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGF 370 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHh
Confidence 3344555556666666677899999999888655555555 5588999999999999 888777776633322221100
Q ss_pred -hhccCChhHHHHHHHHHHHhhhhhhhhhhhHhHHhhcCCC-ceeehhHHHHHhhhhHHHHHHHHHHHHhCC
Q 007665 111 -MKKIAKPKVWQMCLYICIGANSQNFANTGSLVTCVKNFPE-SRGMMLGLMKGFVGLSGAVFTQIYLAIYGN 180 (594)
Q Consensus 111 -~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp~-~rg~~~gi~~~~~glg~~i~~~l~~~l~~~ 180 (594)
....+.++-+.+.+..++.|+..|..++.+-++.++.-|+ +.+.-.|++....-.++.++|.+.+.+.+.
T Consensus 371 ~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~ 442 (477)
T PF11700_consen 371 WPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDA 442 (477)
T ss_pred hhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0111225667788899999999999999999999999985 689999999888888888888888877664
No 220
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.61 E-value=1.9e-07 Score=111.25 Aligned_cols=155 Identities=15% Similarity=0.083 Sum_probs=106.3
Q ss_pred HhhchHHHHHHHHHHHhhccccceeec-cHHHHHHhcCCCCC--cchhhHHHHhhhhhHhhhhhccccHHHhhhccCCch
Q 007665 347 QALLSIDMLILFLATFCGLGCSLTAID-NLGQIGESLGYPQH--TINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRP 423 (594)
Q Consensus 347 ~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~s~~--~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~ 423 (594)
..++++.|+.+++..++.......... ..+.+....+.+.. ..++..+++.++..++.+++|+++||+|||+
T Consensus 4 ~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~----- 78 (1146)
T PRK08633 4 NLLKIIGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNR----- 78 (1146)
T ss_pred chhhhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHH-----
Confidence 356677777766655554322212111 12233334444322 3466778889999999999999999999884
Q ss_pred HHHHHHHHHHHHHHHHH---h-ccCcchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhh
Q 007665 424 LIMAISLILSAVGDVLI---A-FPKPGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNV 499 (594)
Q Consensus 424 ~~~~~~~~~~~i~~~~~---~-~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp 499 (594)
++..+.++.++..++. . ..+.+.+++..++.|++.+...+...+++.|.+++++++++.|+...+..+|.++ ||
T Consensus 79 -~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~l-g~ 156 (1146)
T PRK08633 79 -VIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILA-GT 156 (1146)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHH-HH
Confidence 3444433322222221 1 1234566777889999999999999999999999999999999999999999865 99
Q ss_pred hHHHhhhhH
Q 007665 500 IVVGRLYDR 508 (594)
Q Consensus 500 ~~~g~l~~~ 508 (594)
.+.+.+.+.
T Consensus 157 ~l~~~l~~~ 165 (1146)
T PRK08633 157 ALFSFLFES 165 (1146)
T ss_pred HHHHHHHHh
Confidence 888888764
No 221
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.59 E-value=3e-06 Score=88.23 Aligned_cols=134 Identities=9% Similarity=0.025 Sum_probs=89.6
Q ss_pred HHHHHHhCCCHhHHHHHHHHH-hhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHH
Q 007665 49 KEIKSTLGYDQTTLNLLSTCK-DLGANV-GVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIAKPKVWQMCLYI 126 (594)
Q Consensus 49 ~~l~~~~~~s~~~~~~~~~~~-~~~~~~-~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~~~~~~l~~~r 126 (594)
+.+.+|.|++.++++++.... ....+. .++.|++.||+|+|+++..+.++..+..+.. +........++...++...
T Consensus 232 ~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 310 (390)
T TIGR02718 232 KLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLW-FAQAAFWLAPGIAVAWSCS 310 (390)
T ss_pred hHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH-HHHHHcccCCcHHHHHHHH
Confidence 444456899999999954443 445555 6799999999999999988776653433222 2211111112333344445
Q ss_pred HHHhhhhhhhhhhhHhHHhhcC-C-CceeehhHHHHHhhhhHHHHHHHHHHHHhCCChH
Q 007665 127 CIGANSQNFANTGSLVTCVKNF-P-ESRGMMLGLMKGFVGLSGAVFTQIYLAIYGNDAK 183 (594)
Q Consensus 127 ~l~G~g~g~~~~~~~~~i~~~f-p-~~rg~~~gi~~~~~glg~~i~~~l~~~l~~~~~~ 183 (594)
++.+++.+...+.....+.+.. | +++|+..++.++..++|..+++.+.+.+.+..+.
T Consensus 311 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~ 369 (390)
T TIGR02718 311 AFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGY 369 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 5666666666666666666666 4 4689999999999999999999998887764333
No 222
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.58 E-value=1.9e-07 Score=98.26 Aligned_cols=158 Identities=11% Similarity=0.167 Sum_probs=120.4
Q ss_pred HhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHh
Q 007665 380 ESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAFPKPGSVYVASLLVGFSY 459 (594)
Q Consensus 380 ~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~G~~~ 459 (594)
++.++..++-+...+++.++.++|.+.++.+.||+.-. +.+...+.+..+.+++.....+.+.+.+.-++.|+..
T Consensus 74 edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls-----~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~e 148 (495)
T KOG2533|consen 74 EDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLS-----KGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFE 148 (495)
T ss_pred cccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChH-----HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence 34566667788899999999999999999999998522 1333333333333434333445567788889999999
Q ss_pred hhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhhcccccCCCcccccccchHHHH
Q 007665 460 GAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGMTRAMVKDLTCIGRQCYRLSF 539 (594)
Q Consensus 460 g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 539 (594)
+..+|....+++..|+++++|...|+.+...++|++. |.++...++.... . .+..+|++.|
T Consensus 149 s~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~-ggliA~g~~~~~~-~-----------------~~~~gW~~~F 209 (495)
T KOG2533|consen 149 SGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIF-GGLIAYGVFKLNG-S-----------------GGLAGWRWLF 209 (495)
T ss_pred cccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHH-HHHHHHHhhhhcC-C-----------------CCcCCceeeh
Confidence 9999999999999999999999999999999999964 8877776654210 0 1136899999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhh
Q 007665 540 TILAGVNIFGALITFILVMRTR 561 (594)
Q Consensus 540 ~~~~~~~~~~~~~~~~~~~~~~ 561 (594)
++-+++.++..++.++..+...
T Consensus 210 iI~G~i~~~~gi~~f~~lp~~P 231 (495)
T KOG2533|consen 210 IIEGVITLVLGIVVFFFLPDNP 231 (495)
T ss_pred hHHHHHHHHHHheEEEEecCCh
Confidence 9999999888888877765543
No 223
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.49 E-value=4.2e-06 Score=83.83 Aligned_cols=141 Identities=15% Similarity=0.067 Sum_probs=108.6
Q ss_pred HHHHhhhhhhchhhhHHHHHHHhCCCHhHHHHHHHHHhhhh-hhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHh
Q 007665 33 LIMAGAGATYLFGTYSKEIKSTLGYDQTTLNLLSTCKDLGA-NVGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVM 111 (594)
Q Consensus 33 l~~~~~g~~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~ 111 (594)
...+..|....++.-.-.-.+++|++..++.++.....+.+ ..+++.|+|.||+|.|+++..++++..+.++...+.
T Consensus 261 ~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~-- 338 (438)
T COG2270 261 RFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFL-- 338 (438)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHc--
Confidence 44455565555554444456699999999999766666555 558899999999999999999998877765544222
Q ss_pred hccCChhHHHHHHHHHHHhhhhhhhhhhhHhHHhhcCCC-ceeehhHHHHHhhhhHHHHHHHHHHHHhCC
Q 007665 112 KKIAKPKVWQMCLYICIGANSQNFANTGSLVTCVKNFPE-SRGMMLGLMKGFVGLSGAVFTQIYLAIYGN 180 (594)
Q Consensus 112 ~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp~-~rg~~~gi~~~~~glg~~i~~~l~~~l~~~ 180 (594)
..-.-+.++.++.|+..|.....+-++..+..|+ |-++..|++....-.++.++|.+.+.+.+.
T Consensus 339 -----~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~i 403 (438)
T COG2270 339 -----EGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQI 403 (438)
T ss_pred -----cccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHH
Confidence 2234456778899999999999999999999985 679999999888888888888888776654
No 224
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.47 E-value=7.1e-07 Score=94.90 Aligned_cols=153 Identities=14% Similarity=0.161 Sum_probs=125.1
Q ss_pred cHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhccCc-chH-HHH
Q 007665 374 NLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAFPKP-GSV-YVA 451 (594)
Q Consensus 374 ~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~-~~~ 451 (594)
..+.+.++.+.+..+++++.++...+..+..++.+.+.||+|.| ...+.+.++..+++++..+.+. +.+ ...
T Consensus 68 ~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R------~v~i~G~~v~~~g~~lssF~~~i~~l~lt~ 141 (509)
T KOG2504|consen 68 LFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCR------TVMIAGGLVAALGLLLSSFATSLWQLYLTF 141 (509)
T ss_pred hHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCch------HHHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 34556677788888889999999999999999999999999987 4678888888899888877654 333 345
Q ss_pred HHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhhcccccCCCccccc
Q 007665 452 SLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGMTRAMVKDLTCIG 531 (594)
Q Consensus 452 ~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (594)
.++.|+|.|..+.....++...|. ++|+.+.|+...+.++|.+++ |.+...+.+.
T Consensus 142 gvi~G~G~~~~~~paiviv~~YF~-kkR~lA~Gia~~GsG~G~~~~-~~l~~~l~~~----------------------- 196 (509)
T KOG2504|consen 142 GVIGGLGLGLIYLPAVVILGTYFE-KKRALATGIAVSGTGVGTVVF-PPLLKYLLSK----------------------- 196 (509)
T ss_pred HHHhhccchhhhcchhhhhhhHhH-HHHHHHHhhhhccCCcceeeH-HHHHHHHHHH-----------------------
Confidence 688999999988888888887775 999999999999999999987 5588888888
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHh
Q 007665 532 RQCYRLSFTILAGVNIFGALITFILVM 558 (594)
Q Consensus 532 ~~~~~~~f~~~~~~~~~~~~~~~~~~~ 558 (594)
.+|+..+.+.+.+.+-..+.....++
T Consensus 197 -~G~r~~~l~~~~~~l~~~~~~~~~rp 222 (509)
T KOG2504|consen 197 -YGWRGALLIFGGISLNVLVAGALLRP 222 (509)
T ss_pred -hCcHHHHHHHHHHHHHHHHHHHHcCC
Confidence 68999999999888666665555544
No 225
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.42 E-value=6.2e-06 Score=87.22 Aligned_cols=116 Identities=14% Similarity=0.137 Sum_probs=85.3
Q ss_pred CHhHHHHHHHHHhhhh-hhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHhhhhhhh
Q 007665 58 DQTTLNLLSTCKDLGA-NVGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIAKPKVWQMCLYICIGANSQNFA 136 (594)
Q Consensus 58 s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~~~~~~l~~~r~l~G~g~g~~ 136 (594)
+..+.+++.....+.. +..++.+++.||+|+|+++..+.++..++.++..+. . ++.+.+++..++.|++.+..
T Consensus 255 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~g~~~~~~ 328 (437)
T TIGR00792 255 DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFA-----G-SNLPLILVLIILAGFGQNFV 328 (437)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHc-----c-hhHHHHHHHHHHHHHHHHHH
Confidence 4556666444444555 457899999999999999999988888876655331 1 24555566778888888888
Q ss_pred hhhhHhHHhhcCC--------CceeehhHHHHHhhhhHHHHHHHHHHHHhC
Q 007665 137 NTGSLVTCVKNFP--------ESRGMMLGLMKGFVGLSGAVFTQIYLAIYG 179 (594)
Q Consensus 137 ~~~~~~~i~~~fp--------~~rg~~~gi~~~~~glg~~i~~~l~~~l~~ 179 (594)
.+...+.+.|..+ +++|.+.|+.+....+|..+++.+.+.+++
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~ 379 (437)
T TIGR00792 329 TGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILG 379 (437)
T ss_pred HHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777777776543 347899999988888999998888877654
No 226
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.39 E-value=2.4e-06 Score=88.93 Aligned_cols=137 Identities=15% Similarity=0.211 Sum_probs=99.5
Q ss_pred hhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhc----cCcchHHHHHHHHHHHhhhhHHH
Q 007665 390 NTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAF----PKPGSVYVASLLVGFSYGAQLTL 465 (594)
Q Consensus 390 ~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~----~~~~~~~~~~~l~G~~~g~~~~~ 465 (594)
+..++++.+++++|.+..++++||+|||. .+.++.++..++.++... .....+.+.-++.|+..|.....
T Consensus 63 S~~vs~f~iG~~~Gs~~~~~la~~~GRK~------~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~ 136 (485)
T KOG0569|consen 63 SLIVSIFFIGGMIGSFSSGLLADRFGRKN------ALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGL 136 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcchH------HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHH
Confidence 44678899999999999999999999983 344444444444333322 23456777889999999999999
Q ss_pred HHHHHHHhccCCccccccchhhccchhhhhhhhh-hHHHhhhhHHHHHhhhhhhcccccCCCcccccccchHHHHHHHHH
Q 007665 466 LFIIISELFGLKYYSTLFNCGQLASPLGSYVLNV-IVVGRLYDREAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAG 544 (594)
Q Consensus 466 ~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp-~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~ 544 (594)
.|.++.|+.|.+.||....+..++..+|..+ +. .....+.+. ...|...+.+..+
T Consensus 137 ~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll-~~~~~l~~ilGt-----------------------~~~W~~l~~~~~i 192 (485)
T KOG0569|consen 137 VPMYLTEISPKNLRGALGTLLQIGVVIGILL-GQVLGLPSLLGT-----------------------EDLWPYLLAFPLI 192 (485)
T ss_pred HHHHHhhcChhhhccHHHHHHHHHHHHHHHH-HHHHccHHhcCC-----------------------CcchHHHHHHHHH
Confidence 9999999999999999988888888887754 43 222223322 1458888877777
Q ss_pred HHHHHHHHHHHH
Q 007665 545 VNIFGALITFIL 556 (594)
Q Consensus 545 ~~~~~~~~~~~~ 556 (594)
..++..++..++
T Consensus 193 ~~~~~l~~l~~~ 204 (485)
T KOG0569|consen 193 PALLQLALLPFL 204 (485)
T ss_pred HHHHHHHHHhcC
Confidence 777766655554
No 227
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.33 E-value=1.1e-05 Score=85.01 Aligned_cols=121 Identities=11% Similarity=0.111 Sum_probs=88.1
Q ss_pred HHHHhCCCHhHHHHHHHHHhhhh-hhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHH
Q 007665 51 IKSTLGYDQTTLNLLSTCKDLGA-NVGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIAKPKVWQMCLYICIG 129 (594)
Q Consensus 51 l~~~~~~s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~~~~~~l~~~r~l~ 129 (594)
.+..++.+ ...+.+.....+.. +..+++++++||+|+|+++..+.++..++.++.++... ++.+.+++..++.
T Consensus 252 ~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~i~~~l~ 325 (428)
T PF13347_consen 252 FTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGP-----GSPWLVLILFILA 325 (428)
T ss_pred HHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHh-----hhHHHHHHHHHHh
Confidence 34445555 55566555545554 55889999999999999999999999999887765411 3678888899999
Q ss_pred hhhhhhhhhhhHhHHhhcCCC--------ceeehhHHHHHhhhhHHHHHHHHHHHH
Q 007665 130 ANSQNFANTGSLVTCVKNFPE--------SRGMMLGLMKGFVGLSGAVFTQIYLAI 177 (594)
Q Consensus 130 G~g~g~~~~~~~~~i~~~fp~--------~rg~~~gi~~~~~glg~~i~~~l~~~l 177 (594)
|++.+..+....+.+.|..+. +.|...|+.+...-++..+++.+.+.+
T Consensus 326 gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~ 381 (428)
T PF13347_consen 326 GIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLL 381 (428)
T ss_pred HhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHH
Confidence 999999988888888887741 236666666666666666666655544
No 228
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.29 E-value=7.5e-06 Score=82.53 Aligned_cols=109 Identities=18% Similarity=0.254 Sum_probs=83.0
Q ss_pred CCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhcc----Cc----chHHHHHHHH
Q 007665 384 YPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAFP----KP----GSVYVASLLV 455 (594)
Q Consensus 384 ~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~~----~~----~~~~~~~~l~ 455 (594)
+++...+.+-.+..+++++|+++.|++.||+|||+. +...+++++++.++...+ ++ .++...-++.
T Consensus 81 ~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~v------YG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~L 154 (538)
T KOG0252|consen 81 YPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKV------YGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLL 154 (538)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhh------hhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHh
Confidence 566667777889999999999999999999999963 333444444444433322 12 2345567899
Q ss_pred HHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhh
Q 007665 456 GFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNV 499 (594)
Q Consensus 456 G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp 499 (594)
|+|.|+=+|+..++++|....+.||+-.+.+...+..|.. .|.
T Consensus 155 GiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~Gil-aG~ 197 (538)
T KOG0252|consen 155 GIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGIL-AGG 197 (538)
T ss_pred hccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHh-hcc
Confidence 9999999999999999999999999999999888877764 354
No 229
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.27 E-value=1.1e-05 Score=82.33 Aligned_cols=143 Identities=10% Similarity=0.066 Sum_probs=105.0
Q ss_pred HhHHHHHHHHHhhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHhhhhhhhh
Q 007665 59 QTTLNLLSTCKDLGANV-GVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIAKPKVWQMCLYICIGANSQNFAN 137 (594)
Q Consensus 59 ~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~~~~~~l~~~r~l~G~g~g~~~ 137 (594)
++..|.+.+...+.-+. ..+..++.+|+|.|+.++++...+++=.++++++ ++.+.+.+.+.+.|+-.++..
T Consensus 258 ~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~-------~~~~~i~~~klLH~~e~~l~l 330 (412)
T PF01306_consen 258 NQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFA-------TNPWVISLIKLLHALEFPLLL 330 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT---------SHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhh-------cchHHHHHHHHHHHHHHHHHH
Confidence 34455555554444444 5699999999999999999999988888777665 788888999999999999999
Q ss_pred hhhHhHHhhcCCCc-eeehhHHH-HHhhhhHHHHHHHHHHHHhCCCh-HHHHHHHHHHHHHHHHHHHHHhccCC
Q 007665 138 TGSLVTCVKNFPES-RGMMLGLM-KGFVGLSGAVFTQIYLAIYGNDA-KSMILLIAWLPALVSLVFVYTIRPLK 208 (594)
Q Consensus 138 ~~~~~~i~~~fp~~-rg~~~gi~-~~~~glg~~i~~~l~~~l~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~ 208 (594)
.+...++++.||+| .++.-.+. ....++|..+.+++.+.+.+..+ ...++..+.......++..+.++..+
T Consensus 331 va~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~~~ 404 (412)
T PF01306_consen 331 VAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKKDK 404 (412)
T ss_dssp HHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--SS
T ss_pred HHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecCCC
Confidence 99999999999865 45666663 46778999999999999888754 44555666655566666666665433
No 230
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.27 E-value=1.1e-05 Score=79.26 Aligned_cols=152 Identities=16% Similarity=0.097 Sum_probs=126.0
Q ss_pred cHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhccCcchHHHHHH
Q 007665 374 NLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAFPKPGSVYVASL 453 (594)
Q Consensus 374 ~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 453 (594)
.++.+-++.|+|...++++.++.-++-.+..++..++.+|+|.+ ..+..+.++.+++..+=...+...++....
T Consensus 34 LL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~e------r~l~~~Llli~~G~~iR~~~~~~~L~~gt~ 107 (395)
T COG2807 34 LLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEE------RSLFLALLLIAAGILIRSLGGLPLLFLGTL 107 (395)
T ss_pred hHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhH------HHHHHHHHHHHHHHHHHhcccHHHHHHHHH
Confidence 34556667899999999999999999999999999999999876 356777777777777765555667888899
Q ss_pred HHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhhcccccCCCccccccc
Q 007665 454 LVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGMTRAMVKDLTCIGRQ 533 (594)
Q Consensus 454 l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 (594)
+.|.+.+....+.|.++-+.|| |+.+..+|++.+..++++.+ ++.+.-.+.++ .+
T Consensus 108 l~G~gIav~nVLLPslIK~~Fp-k~~~~mtglYs~sl~~~aaL-aa~lavpla~~-----------------------~~ 162 (395)
T COG2807 108 LAGAGIAVINVLLPSLIKRDFP-KRVGLMTGLYSTSLGAGAAL-AAALAVPLAQH-----------------------SG 162 (395)
T ss_pred HHHhhHHHHHHhhhHHHHhhcc-cchhhHHhHHHHHHHHHHHH-HhhhhhHHHHh-----------------------hc
Confidence 9999999999999999999997 89999999999999998876 77777777666 25
Q ss_pred chHHHHHHHHHHHHHHHHHHHHH
Q 007665 534 CYRLSFTILAGVNIFGALITFIL 556 (594)
Q Consensus 534 ~~~~~f~~~~~~~~~~~~~~~~~ 556 (594)
+|+.++.+.+..++++++.-+.-
T Consensus 163 gW~~aL~~WAl~allAl~~WlPq 185 (395)
T COG2807 163 GWRGALGFWALLALLALLIWLPQ 185 (395)
T ss_pred cHHHHHHHHHHHHHHHHHHHhhh
Confidence 79999999999888877654443
No 231
>PRK09848 glucuronide transporter; Provisional
Probab=98.25 E-value=2.6e-05 Score=82.79 Aligned_cols=122 Identities=13% Similarity=0.038 Sum_probs=86.7
Q ss_pred HHHhCCCHhHHHHHHHHHhhhh-hhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHh
Q 007665 52 KSTLGYDQTTLNLLSTCKDLGA-NVGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIAKPKVWQMCLYICIGA 130 (594)
Q Consensus 52 ~~~~~~s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~~~~~~l~~~r~l~G 130 (594)
++.+|.+.....+......+.. +..++.+++.||+|+|+++.+|.++..++.++..+. ...+++.+++..++.|
T Consensus 256 ~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~-----~~~~~~~~~~~~~l~g 330 (448)
T PRK09848 256 RYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWV-----SVWSLPVALVALAIAS 330 (448)
T ss_pred eeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHc-----CchhHHHHHHHHHHHH
Confidence 4556766554444444434444 457899999999999999999999888887665421 1135666666778889
Q ss_pred hhhhhhhhhhHhHHhhcCCC--------ceeehhHHHHHhhhhHHHHHHHHHHHHh
Q 007665 131 NSQNFANTGSLVTCVKNFPE--------SRGMMLGLMKGFVGLSGAVFTQIYLAIY 178 (594)
Q Consensus 131 ~g~g~~~~~~~~~i~~~fp~--------~rg~~~gi~~~~~glg~~i~~~l~~~l~ 178 (594)
+|.+...+...+...|..|+ ++|...|+.+....+|..+++.+.+.++
T Consensus 331 ~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l 386 (448)
T PRK09848 331 IGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFIL 386 (448)
T ss_pred HHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998888877777776642 2488888888888888888877766554
No 232
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.19 E-value=0.00037 Score=70.98 Aligned_cols=91 Identities=20% Similarity=0.353 Sum_probs=63.9
Q ss_pred hhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHhhhhhhhhhhhHhHHhhcCCCceee
Q 007665 75 VGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIAKPKVWQMCLYICIGANSQNFANTGSLVTCVKNFPESRGM 154 (594)
Q Consensus 75 ~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp~~rg~ 154 (594)
.-+.+-+..+|...+.=.....++..+|.++.+++ ++.+.-+++-++.+++.|.....-..+ +..|++ .
T Consensus 75 ~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~-------~~v~~~l~Gv~las~ssg~GE~tfL~l-t~~y~~---~ 143 (402)
T PF02487_consen 75 VKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFS-------PSVWVRLLGVVLASLSSGLGEVTFLSL-THFYGK---S 143 (402)
T ss_pred HHHHhHhhhhhccchHHHHHHHHHHHHHHhheeec-------cchhHHHHHHHHHhhhhhhhHHHHHHH-HHhcCc---c
Confidence 35567777888875544445667777887776544 677777778888999998887776665 556675 3
Q ss_pred hhHHHHHhhhhHHHHHHHHHHH
Q 007665 155 MLGLMKGFVGLSGAVFTQIYLA 176 (594)
Q Consensus 155 ~~gi~~~~~glg~~i~~~l~~~ 176 (594)
.++-+.+|.|.++++++.....
T Consensus 144 ~l~~wssGTG~aGl~Ga~~y~~ 165 (402)
T PF02487_consen 144 SLSAWSSGTGGAGLVGALYYLG 165 (402)
T ss_pred ccccccCCcChhhHHHHHHHHH
Confidence 4677778888888887755443
No 233
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=98.19 E-value=0.00067 Score=70.33 Aligned_cols=160 Identities=16% Similarity=0.081 Sum_probs=96.5
Q ss_pred ccHHHhhchHHHHHHHHHHHhhccccceeeccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCc
Q 007665 343 YGILQALLSIDMLILFLATFCGLGCSLTAIDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPR 422 (594)
Q Consensus 343 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~ 422 (594)
..++..++++.|.......++++. -.++-..+..|..+.|+++...+.+-+..++.+..|.++..++.+|+|..+. -
T Consensus 250 ~~w~~Y~~q~vflas~alalLY~T-VLsf~~lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~--G 326 (432)
T PF06963_consen 250 RGWRTYFRQPVFLASFALALLYFT-VLSFGGLMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRA--G 326 (432)
T ss_pred ccHHHHHhCHHHHHHHHHHHHHHH-HhcCcHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhh--H
Confidence 345677788876654333332222 2334455677888889999999999999999999999999999999985431 1
Q ss_pred hHHHHHHHHHHHHHHHHHhccC-c-chHHHHHHHHHHHhh-----hhHHHHHHHHHHhccCCccccccchhhccchhhhh
Q 007665 423 PLIMAISLILSAVGDVLIAFPK-P-GSVYVASLLVGFSYG-----AQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSY 495 (594)
Q Consensus 423 ~~~~~~~~~~~~i~~~~~~~~~-~-~~~~~~~~l~G~~~g-----~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ 495 (594)
.+-+..=..+..++...+..+. + .......++.|+... ..=-...-++.|..|+++||+..|+-+..+++...
T Consensus 327 ~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~l 406 (432)
T PF06963_consen 327 LWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFEL 406 (432)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHH
Confidence 1111111111112222222222 2 122223333333221 22224456788999999999999999999888885
Q ss_pred hhhhhHHHhhhh
Q 007665 496 VLNVIVVGRLYD 507 (594)
Q Consensus 496 ~~gp~~~g~l~~ 507 (594)
+ .++.+.+..
T Consensus 407 l--~~~~~ii~~ 416 (432)
T PF06963_consen 407 L--SFVLTIIFP 416 (432)
T ss_pred H--HHHHHhccC
Confidence 4 345566543
No 234
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.18 E-value=2.2e-05 Score=74.96 Aligned_cols=132 Identities=20% Similarity=0.208 Sum_probs=89.3
Q ss_pred cccceeeccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhcc--
Q 007665 366 GCSLTAIDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAFP-- 443 (594)
Q Consensus 366 ~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~~-- 443 (594)
+..+.+-.+.|.+-+.+|+|+.+...+.....++..+| +..|.+.|+++.+ ..+.++.+...+++.++...
T Consensus 16 Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~------~~l~iG~~~~~~GY~~~~l~~~ 88 (250)
T PF06813_consen 16 GTTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPW------VVLLIGAVLGFVGYGLLWLAVS 88 (250)
T ss_pred CcccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchH------HHHHHHHHHHHHHHHHHHHHHh
Confidence 34444445566666778999999999988889998876 7789999999766 56778888888887766531
Q ss_pred C----c--chHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhh
Q 007665 444 K----P--GSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLY 506 (594)
Q Consensus 444 ~----~--~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~ 506 (594)
. + +.+.+..++.|.+........-....+.|| ++||++.|+.-...++++.++.. +...++
T Consensus 89 ~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~-i~~~~f 155 (250)
T PF06813_consen 89 GRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQ-IYSAFF 155 (250)
T ss_pred CccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHH-HHHHHc
Confidence 1 1 222222333333333333333444557897 78999999999999998877644 333333
No 235
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.18 E-value=5.4e-05 Score=71.50 Aligned_cols=145 Identities=14% Similarity=0.126 Sum_probs=99.4
Q ss_pred HHHHHHHHHHHHhhhhhhchhhhHHHHHHHhCCCHhHHHH-HHHHHhhhhhhhhhhhhhhcccCchHHHHHHHHH-HHHH
Q 007665 25 WFMMFASFLIMAGAGATYLFGTYSKEIKSTLGYDQTTLNL-LSTCKDLGANVGVLSGLLAEVTPPWLVLLVGSAM-NFGG 102 (594)
Q Consensus 25 w~~~~~~~l~~~~~g~~~~~~~~~~~l~~~~~~s~~~~~~-~~~~~~~~~~~~~~~G~l~Dr~G~r~v~~~g~~l-~~ig 102 (594)
|.+++.+++..+...-.+..+ ...+++.||+|..+.+. .++.+.+.....|+.|.++||+|++...+.+..+ ...+
T Consensus 267 w~~~iicv~yyva~fPFi~lg--~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~ 344 (459)
T KOG4686|consen 267 WVLVIICVLYYVAWFPFITLG--PMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLG 344 (459)
T ss_pred HHHHHHHHHHHHHHHHHhhhh--HHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHH
Confidence 666555555444433222222 23468999999999998 6788888889999999999999999776665443 3334
Q ss_pred HHHHHHHHhhccCChhHHHHHHHHHHHhhhhhhhhhhhHhHHhhcCCC-ceeehhHHHHHhhhhHHHHHHHHHHHHhCC
Q 007665 103 YFMIWLAVMKKIAKPKVWQMCLYICIGANSQNFANTGSLVTCVKNFPE-SRGMMLGLMKGFVGLSGAVFTQIYLAIYGN 180 (594)
Q Consensus 103 ~~l~~~a~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp~-~rg~~~gi~~~~~glg~~i~~~l~~~l~~~ 180 (594)
-.+..+. ++.=.+...+.|++......+-...++...|+ +-|++.|...+...+|-++.+.+.+.+.+.
T Consensus 345 H~~l~Ft---------~lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~ 414 (459)
T KOG4686|consen 345 HSGLFFT---------FLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADG 414 (459)
T ss_pred hhhHHhh---------hccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecC
Confidence 3333222 11123455667777666554445566677785 689999999999999999988888877765
No 236
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.18 E-value=0.00015 Score=75.32 Aligned_cols=128 Identities=16% Similarity=0.053 Sum_probs=94.5
Q ss_pred HHHHHHHhC-CCHhHHHHHHHHHhhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHH---
Q 007665 48 SKEIKSTLG-YDQTTLNLLSTCKDLGANV-GVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIAKPKVWQM--- 122 (594)
Q Consensus 48 ~~~l~~~~~-~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~~~~~~l--- 122 (594)
.+..-++.| .+....+.+-+...+.-+. -.+.+++..|+|.|++++++.+..++=+.+.+.. . ++.+..
T Consensus 230 ~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~----~--~~~~~~~~~ 303 (400)
T PF03825_consen 230 FSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYF----S--DPWPFIVAL 303 (400)
T ss_pred HHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHh----c--CCcHHHHHH
Confidence 344456666 6767666644444455554 5689999999999999999988877776665432 1 122222
Q ss_pred -HHHHHHHhhhhhhhhhhhHhHHhhcCCC-ceeehhHHHHH-hhhhHHHHHHHHHHHHhCCC
Q 007665 123 -CLYICIGANSQNFANTGSLVTCVKNFPE-SRGMMLGLMKG-FVGLSGAVFTQIYLAIYGND 181 (594)
Q Consensus 123 -~~~r~l~G~g~g~~~~~~~~~i~~~fp~-~rg~~~gi~~~-~~glg~~i~~~l~~~l~~~~ 181 (594)
+....++|+..+....++..++.+..|+ .|+++.|++.+ ..|+|..+++.+.+.+.+..
T Consensus 304 ~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~ 365 (400)
T PF03825_consen 304 QLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAF 365 (400)
T ss_pred HHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHh
Confidence 2335679999999999999999999985 58999999765 57899999999999888753
No 237
>PRK09669 putative symporter YagG; Provisional
Probab=98.16 E-value=4.2e-06 Score=88.75 Aligned_cols=164 Identities=13% Similarity=0.117 Sum_probs=99.9
Q ss_pred HHHHH-HhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHh-ccC--c----c
Q 007665 375 LGQIG-ESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIA-FPK--P----G 446 (594)
Q Consensus 375 ~~~~~-~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~-~~~--~----~ 446 (594)
+++++ +..|+|+..++.++.+.-+.+.+..++.|+++||...|....|++ +..+.+..+++..++. .+. . .
T Consensus 32 l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~-il~~~~~~~i~~~l~f~~p~~~~~~~~~ 110 (444)
T PRK09669 32 LAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPY-LLWFAIPFGVVCLLTFYTPDFGATGKII 110 (444)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchh-HHHHHHHHHHHHHHHHhCCCCCcchHHH
Confidence 44444 467999999999999999999999999999999965443322344 4445455545444333 221 1 1
Q ss_pred hHHHHHHHHHHHhhhhHHHHHHHHHHhc-cCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhhcccccCC
Q 007665 447 SVYVASLLVGFSYGAQLTLLFIIISELF-GLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGMTRAMVK 525 (594)
Q Consensus 447 ~~~~~~~l~G~~~g~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~ 525 (594)
..++..++++.++.....+..++.+|.. ++++|++..+.-.....+|+.+ ++.+...+........
T Consensus 111 ~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i-~~~~~~pl~~~~~~~~------------ 177 (444)
T PRK09669 111 YACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLI-VSVIALPLVDILGKGD------------ 177 (444)
T ss_pred HHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCCc------------
Confidence 2222334555555555555567777877 4567888777777777776654 4544433332210000
Q ss_pred CcccccccchHHHHHHHHHHHHHHHHHHHHHH
Q 007665 526 DLTCIGRQCYRLSFTILAGVNIFGALITFILV 557 (594)
Q Consensus 526 ~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 557 (594)
...+|+..+.+.++++++..+.+++..
T Consensus 178 -----~~~g~~~~~~i~~ii~~v~~~~~~~~~ 204 (444)
T PRK09669 178 -----EQKGYFYAMMVMGLLGVVLFFCCFFMT 204 (444)
T ss_pred -----hhhhHHHHHHHHHHHHHHHHHHHhCCe
Confidence 013688888888777766666555443
No 238
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.15 E-value=4.3e-05 Score=71.45 Aligned_cols=98 Identities=15% Similarity=0.139 Sum_probs=68.5
Q ss_pred HHHHhCCCHhHHHHHHHHHhhhh-hhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHH
Q 007665 51 IKSTLGYDQTTLNLLSTCKDLGA-NVGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIAKPKVWQMCLYICIG 129 (594)
Q Consensus 51 l~~~~~~s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~~~~~~l~~~r~l~ 129 (594)
+-+.++....+++.+..+..... +++.+.|-++|+-|||+.-+. +++.++++++ +. .++.|..++++|++.
T Consensus 63 LYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvt----ycitYiLsCi--TK--hSpqYkVLmVGR~LG 134 (454)
T KOG4332|consen 63 LYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVT----YCITYILSCI--TK--HSPQYKVLMVGRVLG 134 (454)
T ss_pred eehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceee----ehHHHHHHHH--hh--cCCceEEEeehhhhh
Confidence 44667888888888655554444 679999999999999997655 7777777743 33 236788999999999
Q ss_pred hhhhhhhhhhhHhHHhhcCCCceeehh
Q 007665 130 ANSQNFANTGSLVTCVKNFPESRGMML 156 (594)
Q Consensus 130 G~g~g~~~~~~~~~i~~~fp~~rg~~~ 156 (594)
|++.+..+.+--+.......++|+.--
T Consensus 135 GiaTsLLFSaFEsWliaEHnekr~Feq 161 (454)
T KOG4332|consen 135 GIATSLLFSAFESWLIAEHNEKRGFEQ 161 (454)
T ss_pred hHHHHHHHHHHHHHHHHHhhhccCChH
Confidence 999998775544432222223455433
No 239
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.13 E-value=3e-05 Score=82.56 Aligned_cols=175 Identities=18% Similarity=0.107 Sum_probs=109.9
Q ss_pred HHHHHHHhhccccceeeccHHHHHH-hcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHH-
Q 007665 356 ILFLATFCGLGCSLTAIDNLGQIGE-SLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILS- 433 (594)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~- 433 (594)
.+...++..... .......+++++ ++|+|+.+.+...+...+...+..+ +|.++||+... .+.|++.+.++.++.
T Consensus 30 ~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~-G~rRr~~l~~~~~l~~ 106 (468)
T TIGR00788 30 IGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLF-GYTKRWYLVLSGLLGS 106 (468)
T ss_pred HHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCC-CccchHHHHHHHHHHH
Confidence 333334443333 233334445555 6799999998999999999888555 99999999621 122345556665555
Q ss_pred HHHHHHHhccCc-chHH-HHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhcc---chhhhhhhhhhHHHhhhhH
Q 007665 434 AVGDVLIAFPKP-GSVY-VASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLA---SPLGSYVLNVIVVGRLYDR 508 (594)
Q Consensus 434 ~i~~~~~~~~~~-~~~~-~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~---~~lg~~~~gp~~~g~l~~~ 508 (594)
.+++..+..... .... +..++.+++.+..-...-.+..|..+ |+++...+..... ..+|..+ ++.+.|.+.+.
T Consensus 107 ~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~v-g~~l~G~l~~~ 184 (468)
T TIGR00788 107 AILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLI-SSLLGGPLLDK 184 (468)
T ss_pred HHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHH-HHHHHHHHHHh
Confidence 233333332222 2222 35667778888777778888999888 5555544444333 3467755 88899988877
Q ss_pred HHHHhhhhhhcccccCCCcccccccchHHHHHHHHHHHHHHHHHHHHHHhhh
Q 007665 509 EAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFILVMRT 560 (594)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 560 (594)
.+|+..|++.+++.++..+.. ...+|.
T Consensus 185 ------------------------~~~~~~f~~~a~l~ll~~~~~-~~~~E~ 211 (468)
T TIGR00788 185 ------------------------TLTRILFLITAALLLLQLFVS-NLSKER 211 (468)
T ss_pred ------------------------cCcchHHHHHHHHHHHHHHHH-Hhcccc
Confidence 579999999888877774433 333443
No 240
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=98.12 E-value=1.9e-05 Score=81.89 Aligned_cols=191 Identities=15% Similarity=0.114 Sum_probs=121.9
Q ss_pred HHHHHHHHHhhccccceeeccHHHHHHh--cCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHH
Q 007665 354 MLILFLATFCGLGCSLTAIDNLGQIGES--LGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLI 431 (594)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 431 (594)
.|+..+..++.......+....-+|.++ .+-+.+..|+..+...++.+++.+..|+.+.|.+.- ++.+.++++
T Consensus 36 i~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~-----k~Pli~s~i 110 (488)
T KOG2325|consen 36 IYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSV-----KKPLIVSFL 110 (488)
T ss_pred HHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCc-----ccCHHHHHH
Confidence 3444444444333222222223345555 677778889999999999999999999999987631 134567777
Q ss_pred HHHHHHHHH-hc---cC--cchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhh
Q 007665 432 LSAVGDVLI-AF---PK--PGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRL 505 (594)
Q Consensus 432 ~~~i~~~~~-~~---~~--~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l 505 (594)
..+++.++. .. ++ .+.++++-++.|+|.+.. ...=.++++.--.++|.+++.....+..+|..+ ||.+...+
T Consensus 111 i~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~-a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~il-Gp~~q~~f 188 (488)
T KOG2325|consen 111 IAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNF-AVLRAYIADASTVEDRPRAFAATSGGFVLGIIL-GPTIQLAF 188 (488)
T ss_pred HHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccH-HHHHHHHHhccCccchHHHHHHhhhHHHHHHHH-hHHHHHHH
Confidence 777877766 22 22 245666778999987764 445567777666788888888887777777654 77443333
Q ss_pred hhHHHHHhhhhhhcccccCCCcccccccchHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 007665 506 YDREAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFILVMRTRR 562 (594)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 562 (594)
..- +++|..+-.. .. -.-|..+-+++++++++.+++..+..+|.++
T Consensus 189 ~~L------g~~G~~i~~~--~~---~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~ 234 (488)
T KOG2325|consen 189 TPL------GEKGFMILPG--LI---FNMYTAPAWLMAILWIIYIVIILFFFKEVYR 234 (488)
T ss_pred hhh------cCCceEEcCc--ce---EEecchHHHHHHHHHHHHHHHHHhheeeccc
Confidence 221 1111111110 00 1348888899999999999888887766554
No 241
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.11 E-value=3.6e-05 Score=76.81 Aligned_cols=173 Identities=15% Similarity=0.092 Sum_probs=126.6
Q ss_pred ccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhccC---c-chH
Q 007665 373 DNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAFPK---P-GSV 448 (594)
Q Consensus 373 ~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~~~---~-~~~ 448 (594)
...|++-+...++..+++++...+..+..++.+..|++.+|+|.|. -+..++.+++++..++.... . ..+
T Consensus 34 iLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~------gi~lgL~l~avg~~lF~pAa~~~~y~~F 107 (422)
T COG0738 34 ILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKA------GIVLGLLLYAVGAALFWPAASSKSYGFF 107 (422)
T ss_pred hhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHH------HHHHHHHHHHHHHHHHhhhhhhhhHHHH
Confidence 3457777778999999999999999999999999999999999883 56788888888888775322 2 345
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhhcccccCCCcc
Q 007665 449 YVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGMTRAMVKDLT 528 (594)
Q Consensus 449 ~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~ 528 (594)
....++.|.|.+..-.....++..+.++++...-.++...++.+|..+ +|.+.+.+.++... ....+-+. +.-.
T Consensus 108 L~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~-gp~~g~~lils~~~-~~~~~~~~----~~~~ 181 (422)
T COG0738 108 LVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAIL-GPLLGSSLILSGVA-LTMSAAQI----LAIK 181 (422)
T ss_pred HHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHH-HHHHHHHHHHhhhh-hccCHHHH----HHHH
Confidence 556788899999988888899999998888888899999999999986 99999998875211 00000000 0000
Q ss_pred cccccchHHHHHHHHHHHHHHHHHHHHHH
Q 007665 529 CIGRQCYRLSFTILAGVNIFGALITFILV 557 (594)
Q Consensus 529 ~~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 557 (594)
-.-...++..+..++...++.++.....+
T Consensus 182 ~~~~~~v~~pYl~~~~~lvll~v~~~~~k 210 (422)
T COG0738 182 GADASSVQFPYLILAGLLVLLAVLILLSK 210 (422)
T ss_pred HHHHHhhhhHHHHHHHHHHHHHHHHHhcc
Confidence 00013577788888777666665555444
No 242
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.10 E-value=6e-06 Score=88.29 Aligned_cols=164 Identities=13% Similarity=0.138 Sum_probs=99.0
Q ss_pred cHHHHHH-hcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhccC---cc---
Q 007665 374 NLGQIGE-SLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAFPK---PG--- 446 (594)
Q Consensus 374 ~~~~~~~-~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~--- 446 (594)
+++.|++ ..|+++..++.++.+.-+.+++..++.|+++||...|....| ..+..+.+..++++.++.... ..
T Consensus 28 ~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrr-p~il~g~i~~~i~~~llf~~p~~~~~~~~ 106 (473)
T PRK10429 28 YLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFK-PWILIGTLANSVVLFLLFSAHLFEGTAQY 106 (473)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcc-hhHhhhhHHHHHHHHHHHcCCCCCccHHH
Confidence 3455555 469999999999999999999999999999996532222122 345556666666655554321 11
Q ss_pred -hHHHHHHHHHHHhhhhHHHHHHHHHHhc-cCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhhcccccC
Q 007665 447 -SVYVASLLVGFSYGAQLTLLFIIISELF-GLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGMTRAMV 524 (594)
Q Consensus 447 -~~~~~~~l~G~~~g~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~ 524 (594)
.+.+..+++++++........++..|+. ++++|.+.++.......+++.+ .+.+...+.+.......
T Consensus 107 ~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~-~~~~~~~~~~~~g~~~~---------- 175 (473)
T PRK10429 107 VFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFV-TAGFTLPFVNYVGGGDR---------- 175 (473)
T ss_pred HHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCCch----------
Confidence 1222334455566555566667888887 5788998888866666666554 33333333222100000
Q ss_pred CCcccccccchHHHHHHHHHHHHHHHHHHHHH
Q 007665 525 KDLTCIGRQCYRLSFTILAGVNIFGALITFIL 556 (594)
Q Consensus 525 ~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 556 (594)
..+|.....+.+++.+++.+.+++.
T Consensus 176 -------~~g~~~~~~i~~~~~~~~~~~~~~~ 200 (473)
T PRK10429 176 -------GFGFQMFTLVLIAFFIVSTIITLRN 200 (473)
T ss_pred -------hhhHHHHHHHHHHHHHHHHHHHHcC
Confidence 1246666666666666555555443
No 243
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.02 E-value=6.2e-08 Score=102.99 Aligned_cols=145 Identities=23% Similarity=0.249 Sum_probs=106.5
Q ss_pred CcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhccC----cchHHHHHHHHHHHhhhh
Q 007665 387 HTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAFPK----PGSVYVASLLVGFSYGAQ 462 (594)
Q Consensus 387 ~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~~~----~~~~~~~~~l~G~~~g~~ 462 (594)
.+.+...+...++..+|.++.|+++||+|||. .+.++.++..++.++....+ ...+.+..++.|++.|..
T Consensus 46 ~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~------~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~ 119 (451)
T PF00083_consen 46 LLSSLLTSSFFIGAIVGALIFGFLADRYGRKP------ALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGA 119 (451)
T ss_pred HHHHHHHHHHHhhhcccccccccccccccccc------cccccccccccccccccccccccccccccccccccccccccc
Confidence 34567788999999999999999999999984 45566666666666655443 456677789999999999
Q ss_pred HHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhhcccccCCCcccccccchHHHHHHH
Q 007665 463 LTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTIL 542 (594)
Q Consensus 463 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 542 (594)
.+..+.++.|..|+++|+....+......+|..+ +. +.+........ ...|+..+.+.
T Consensus 120 ~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~-~~-~~~~~~~~~~~--------------------~~~Wr~~~~~~ 177 (451)
T PF00083_consen 120 YVVSPIYISEIAPPKHRGFLSSLFQLFWALGILL-AS-LIGYIVSYYSD--------------------NWGWRILLIFG 177 (451)
T ss_pred cccccccccccccccccccccccccccccccccc-cc-ccccccccccc--------------------ccccccccccc
Confidence 9999999999999999999999999888888754 54 33333322000 13588888877
Q ss_pred HHHHHHHHHHHHHHHhhh
Q 007665 543 AGVNIFGALITFILVMRT 560 (594)
Q Consensus 543 ~~~~~~~~~~~~~~~~~~ 560 (594)
.+..++..+... ..+|+
T Consensus 178 ~~~~l~~~~~~~-~~pES 194 (451)
T PF00083_consen 178 AIPSLLVLLLRF-FLPES 194 (451)
T ss_pred cccccccccccc-ccccc
Confidence 777666555443 33444
No 244
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.00 E-value=0.0002 Score=71.01 Aligned_cols=156 Identities=13% Similarity=0.034 Sum_probs=101.3
Q ss_pred HHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHH
Q 007665 378 IGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAFPKPGSVYVASLLVGF 457 (594)
Q Consensus 378 ~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~G~ 457 (594)
.+++.|++..+.+.++....+.+.+...+.|.++||+|||+ ..++.+++..++.+.-...+...+++.-++-|+
T Consensus 60 LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~------~cl~~cily~~scl~k~~~~~~~L~~GRvlgGi 133 (354)
T PF05631_consen 60 LYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKK------ACLLFCILYSLSCLTKHSSNYPVLLLGRVLGGI 133 (354)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchH------HHHHHHHHHHHHHHHHhccccHHHHHHHHHHHH
Confidence 45678999999999999999999999999999999999884 344555555565555445555678888899999
Q ss_pred HhhhhHHHHHHHH-HHhc----cCCccccccchhh-ccchhhhhhhhhhHHHhhhhHHHHHhhhhhhcccccCCCccccc
Q 007665 458 SYGAQLTLLFIII-SELF----GLKYYSTLFNCGQ-LASPLGSYVLNVIVVGRLYDREAMKQLAEKGMTRAMVKDLTCIG 531 (594)
Q Consensus 458 ~~g~~~~~~~~~~-~~~~----~~~~~g~~~g~~~-~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (594)
+....++..=++. .|.- |.+..+..++... ..+.+-.++ +..+...+.|..
T Consensus 134 aTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~-aGv~a~~l~~~~---------------------- 190 (354)
T PF05631_consen 134 ATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIG-AGVVANVLADWF---------------------- 190 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHH-HhHHHHHHHHHh----------------------
Confidence 9998888776644 4432 2222233333222 222222221 222333333331
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 007665 532 RQCYRLSFTILAGVNIFGALITFILVMRTRR 562 (594)
Q Consensus 532 ~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 562 (594)
..+...+|....++.+++.+++...+.|+.+
T Consensus 191 ~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg 221 (354)
T PF05631_consen 191 GFGPVAPFDAAIVLLAVAAVLILKTWPENYG 221 (354)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHhcccccCC
Confidence 0235788888888888888877766666544
No 245
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=97.89 E-value=0.00013 Score=71.73 Aligned_cols=92 Identities=10% Similarity=0.026 Sum_probs=69.4
Q ss_pred hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHhhhhhhhhhhhHhHHhhcCCC-ceee
Q 007665 76 GVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIAKPKVWQMCLYICIGANSQNFANTGSLVTCVKNFPE-SRGM 154 (594)
Q Consensus 76 ~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp~-~rg~ 154 (594)
.++.+++.||+|||+++.+..+++++..++...+.. .+.-...++.+|++.-.+ +.+++.+..|.||. -|++
T Consensus 398 lLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~---rn~~tvllf~arafisg~----fqvaYvYtPEVyPTavRat 470 (528)
T KOG0253|consen 398 LLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKT---RNAYTVLLFTARAFISGA----FQVAYVYTPEVYPTAVRAT 470 (528)
T ss_pred hhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcC---cchhHHHHHHHHHHHhch----heEEEEecCcccchhhhhc
Confidence 458999999999999999999999998777654422 111224455678665433 34556788899995 5999
Q ss_pred hhHHHHHhhhhHHHHHHHHH
Q 007665 155 MLGLMKGFVGLSGAVFTQIY 174 (594)
Q Consensus 155 ~~gi~~~~~glg~~i~~~l~ 174 (594)
..|..++..-+|+++.|.+.
T Consensus 471 gvGtcSsmaRIggI~~p~iA 490 (528)
T KOG0253|consen 471 GVGTCSSMARIGGIFSPVIA 490 (528)
T ss_pred chhhhhhHHhhhhhhhhHHH
Confidence 99999998889998877665
No 246
>PRK11462 putative transporter; Provisional
Probab=97.88 E-value=4.6e-05 Score=81.04 Aligned_cols=163 Identities=10% Similarity=0.072 Sum_probs=102.7
Q ss_pred HHHHH-HhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhccC---cc----
Q 007665 375 LGQIG-ESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAFPK---PG---- 446 (594)
Q Consensus 375 ~~~~~-~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~---- 446 (594)
+.+++ +..|+++..++.++.+.-+.+++.-++.|.++||...|....|+++ ..+.+..+++++++.... ..
T Consensus 32 l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~i-l~g~i~~~i~~~llf~~p~~s~~~~~~ 110 (460)
T PRK11462 32 MMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWV-LFGALPFGIVCVLAYSTPDLSMNGKMI 110 (460)
T ss_pred HHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhH-hHHHHHHHHHHHHHHhCCCCCcchHHH
Confidence 34444 4579999999999999999999999999999998755544344454 455555555555554322 11
Q ss_pred hHHHHHHHHHHHhhhhHHHHHHHHHHhcc-CCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhhcccccCC
Q 007665 447 SVYVASLLVGFSYGAQLTLLFIIISELFG-LKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGMTRAMVK 525 (594)
Q Consensus 447 ~~~~~~~l~G~~~g~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~ 525 (594)
...+..+++.+++.....+..++.+|+.+ +++|++..+.-..+..+|+.+ ++.+...+.......+
T Consensus 111 y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~-~~~~~~plv~~~g~~~------------ 177 (460)
T PRK11462 111 YAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGML-STVLMMPLVNLIGGDN------------ 177 (460)
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCCc------------
Confidence 12233445566666655566677777776 678999999888888887754 5555444443210000
Q ss_pred CcccccccchHHHHHHHHHHHHHHHHHHHHH
Q 007665 526 DLTCIGRQCYRLSFTILAGVNIFGALITFIL 556 (594)
Q Consensus 526 ~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 556 (594)
...+|.....+.+++.+++..+++..
T Consensus 178 -----~~~g~~~~~~i~~ii~~i~~~i~~~~ 203 (460)
T PRK11462 178 -----KPLGFQGGIAVLSVVAFMMLAFCFFT 203 (460)
T ss_pred -----hhhhHHHHHHHHHHHHHHHHHHHHhc
Confidence 01357776666666655555544443
No 247
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=97.87 E-value=0.0063 Score=67.00 Aligned_cols=133 Identities=11% Similarity=0.028 Sum_probs=92.9
Q ss_pred hhHHHHHHHhCCCHhHHHH-HHHHHhhhhhhhhhhhhhhccc-CchHHHHHHHHHHHHHHHHHHHHHhhccC-ChhHHHH
Q 007665 46 TYSKEIKSTLGYDQTTLNL-LSTCKDLGANVGVLSGLLAEVT-PPWLVLLVGSAMNFGGYFMIWLAVMKKIA-KPKVWQM 122 (594)
Q Consensus 46 ~~~~~l~~~~~~s~~~~~~-~~~~~~~~~~~~~~~G~l~Dr~-G~r~v~~~g~~l~~ig~~l~~~a~~~~~~-~~~~~~l 122 (594)
++...+.+.+|.++++... +..+..+..+...++|.++|++ |+++.+.++.++..+|..+.++.-..... .......
T Consensus 9 iLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~ 88 (654)
T TIGR00926 9 ILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLD 88 (654)
T ss_pred HHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHH
Confidence 3445567789999988887 5565556667788999999986 99999999999999998776542110000 0112234
Q ss_pred HHHHHHHhhhhhhhhhhhHhHHhhcCC-Cc---eeehhHHHHHhhhhHHHHHHHHHHHHh
Q 007665 123 CLYICIGANSQNFANTGSLVTCVKNFP-ES---RGMMLGLMKGFVGLSGAVFTQIYLAIY 178 (594)
Q Consensus 123 ~~~r~l~G~g~g~~~~~~~~~i~~~fp-~~---rg~~~gi~~~~~glg~~i~~~l~~~l~ 178 (594)
+++-.+..+|.|.+-++..+...+.|+ ++ |-....+...+..+|+.++.++...+-
T Consensus 89 l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~ 148 (654)
T TIGR00926 89 LLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILR 148 (654)
T ss_pred HHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455566777888888888888889885 32 455666666666788888777766654
No 248
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=97.86 E-value=0.00034 Score=69.20 Aligned_cols=124 Identities=21% Similarity=0.160 Sum_probs=89.5
Q ss_pred chhhhHHHHHHHhCCCH--hHHHHHHHHHhhhhh-hhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhccCChhH
Q 007665 43 LFGTYSKEIKSTLGYDQ--TTLNLLSTCKDLGAN-VGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIAKPKV 119 (594)
Q Consensus 43 ~~~~~~~~l~~~~~~s~--~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~~~~ 119 (594)
......+.+..+++.+. .+.++......+... ..++.|.+.||+|||+.+..+...+.++.+++.+. .. ++.
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~--~~---~~~ 94 (338)
T COG0477 20 LLSPALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALA--PN---VGL 94 (338)
T ss_pred hHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhC--cc---chH
Confidence 34455666777777666 467775555555554 46899999999999988888887655554444332 11 357
Q ss_pred HHHHHHHHHHhhhhhhhhhhhHhHHhhcCCC--ceeehhHHHHH-hhhhHHHHHH
Q 007665 120 WQMCLYICIGANSQNFANTGSLVTCVKNFPE--SRGMMLGLMKG-FVGLSGAVFT 171 (594)
Q Consensus 120 ~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp~--~rg~~~gi~~~-~~glg~~i~~ 171 (594)
..+++.|+++|++.+...+....++.+++|+ +|+...++... ...+|..+++
T Consensus 95 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (338)
T COG0477 95 ALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGP 149 (338)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888899999999998999999999999996 68888888776 3555555554
No 249
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=97.83 E-value=5.3e-05 Score=78.38 Aligned_cols=168 Identities=15% Similarity=0.128 Sum_probs=111.2
Q ss_pred cHHHHHH-hcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhccC----c--c
Q 007665 374 NLGQIGE-SLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAFPK----P--G 446 (594)
Q Consensus 374 ~~~~~~~-~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~~~----~--~ 446 (594)
++.+++. ..|+++..+|.++.+.=+.+++.-++.|.++||..+|+...|++++.....+..+..+....++ . .
T Consensus 34 yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ 113 (467)
T COG2211 34 YLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLI 113 (467)
T ss_pred HHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchH
Confidence 4455555 4699999999999999999999999999999998877766677765555555555444443332 1 1
Q ss_pred hHHHHHHHHHHHhhhhHHHHHHHHHHhcc-CCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhhcccccCC
Q 007665 447 SVYVASLLVGFSYGAQLTLLFIIISELFG-LKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGMTRAMVK 525 (594)
Q Consensus 447 ~~~~~~~l~G~~~g~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~ 525 (594)
..++...++++++.....+..++.+++-. +++|.+..+.-..+..+|+++ ...+.+.+.......+.
T Consensus 114 ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l-~~~~~~plv~~~g~~~~----------- 181 (467)
T COG2211 114 YALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLL-VAVLFPPLVKLFGGGDK----------- 181 (467)
T ss_pred HHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCCcc-----------
Confidence 23444567777777666556666666654 567888888877777777665 34455555444211100
Q ss_pred CcccccccchHHHHHHHHHHHHHHHHHHHHHHhh
Q 007665 526 DLTCIGRQCYRLSFTILAGVNIFGALITFILVMR 559 (594)
Q Consensus 526 ~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 559 (594)
..+|.....+++++..+..+.+++-.+|
T Consensus 182 ------~~g~~~~~~~~~vi~~i~~l~~~~~v~E 209 (467)
T COG2211 182 ------ALGYQGTALVLGVIGVILLLFCFFNVKE 209 (467)
T ss_pred ------hhhHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 1468777777777766666666655443
No 250
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.79 E-value=0.00055 Score=60.36 Aligned_cols=101 Identities=11% Similarity=-0.048 Sum_probs=79.8
Q ss_pred HHHHHhhhhhhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHhhhhhhhhhhhHhHH
Q 007665 65 LSTCKDLGANVGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIAKPKVWQMCLYICIGANSQNFANTGSLVTC 144 (594)
Q Consensus 65 ~~~~~~~~~~~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i 144 (594)
....+....+..++.+.+.+++|+|+.+++|.+.+.+-.+.. + . ++.+.++...++.|+|.+..+++...++
T Consensus 43 lai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~-----~--~~~~~l~~~s~l~G~~~a~lW~aqg~yl 114 (156)
T PF05978_consen 43 LAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-F-----Y--PNSYTLYPASALLGFGAALLWTAQGTYL 114 (156)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-H-----h--hhHHHHHHHHHHHhhhhHHhhHhhhHHH
Confidence 455555666677788889999999999999988877553332 1 1 5678888999999999999999999999
Q ss_pred hhcCC-CceeehhHHHHHhhhhHHHHHHHH
Q 007665 145 VKNFP-ESRGMMLGLMKGFVGLSGAVFTQI 173 (594)
Q Consensus 145 ~~~fp-~~rg~~~gi~~~~~glg~~i~~~l 173 (594)
.+... ++|++-.|+..+....+.++++.+
T Consensus 115 t~~s~~~~~~~~~~ifw~i~~~s~i~G~~~ 144 (156)
T PF05978_consen 115 TSYSTEETIGRNTGIFWAIFQSSLIFGNLF 144 (156)
T ss_pred HHcCCHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 99886 468999999888887777666543
No 251
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=97.77 E-value=0.011 Score=62.16 Aligned_cols=130 Identities=8% Similarity=0.033 Sum_probs=84.3
Q ss_pred HHHHHHHhCC-----CHhHHHHHHHHHhhhh--hhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhccC--Ch-
Q 007665 48 SKEIKSTLGY-----DQTTLNLLSTCKDLGA--NVGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIA--KP- 117 (594)
Q Consensus 48 ~~~l~~~~~~-----s~~~~~~~~~~~~~~~--~~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~--~~- 117 (594)
..+++|.+.+ +.+.+.++-+...+-+ ++.++.+++++|++|++++-.-...+..-.+++++.+-..-. ++
T Consensus 26 LR~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~ 105 (472)
T TIGR00769 26 LRDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPT 105 (472)
T ss_pred HHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCc
Confidence 5778888877 3367888655554433 347899999999999999988888777777776655321110 00
Q ss_pred ---------------------hHHHHHHHHHHHhhhhhhhhh-hhHhHHhhcCC-CceeehhHHHHHhhhhHHHHHHHHH
Q 007665 118 ---------------------KVWQMCLYICIGANSQNFANT-GSLVTCVKNFP-ESRGMMLGLMKGFVGLSGAVFTQIY 174 (594)
Q Consensus 118 ---------------------~~~~l~~~r~l~G~g~g~~~~-~~~~~i~~~fp-~~rg~~~gi~~~~~glg~~i~~~l~ 174 (594)
+.|...++.+..-+=...... .-...++|.+. ++-.|-.++...+..+|..+++.+.
T Consensus 106 ~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~ 185 (472)
T TIGR00769 106 ALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTI 185 (472)
T ss_pred HHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 012222333333333333333 45567888885 5667788998888888888888766
Q ss_pred HHH
Q 007665 175 LAI 177 (594)
Q Consensus 175 ~~l 177 (594)
..+
T Consensus 186 ~~~ 188 (472)
T TIGR00769 186 KYF 188 (472)
T ss_pred HHH
Confidence 554
No 252
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=97.68 E-value=0.00041 Score=69.99 Aligned_cols=127 Identities=23% Similarity=0.198 Sum_probs=89.0
Q ss_pred HhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHh-----ccC-------cc-
Q 007665 380 ESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIA-----FPK-------PG- 446 (594)
Q Consensus 380 ~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~-----~~~-------~~- 446 (594)
.+++++..-.+.+++...... ..|+..|..||+...-..++|...+..+.++.+.+..+.. ... +.
T Consensus 8 vEL~vpA~lv~~lval~~~~a-p~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~~ 86 (403)
T PF03209_consen 8 VELGVPAWLVALLVALHYLVA-PLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPFW 86 (403)
T ss_pred HHhccHHHHHHHHHHHHHHHH-HHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccccH
Confidence 467777766677777666665 4699999999998711122233444555555555443322 111 11
Q ss_pred ----hHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhH
Q 007665 447 ----SVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDR 508 (594)
Q Consensus 447 ----~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~ 508 (594)
...+...++|+|.+.......++++|..++|+|+++.++.....-+|..+ +..+.|.+.|.
T Consensus 87 ~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv-~ai~~g~lL~~ 151 (403)
T PF03209_consen 87 LGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIV-SAIVFGRLLDP 151 (403)
T ss_pred HHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHH-HHHHHHHHccc
Confidence 12344678888888888888999999999999999999999888888765 78888888877
No 253
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=97.67 E-value=0.00049 Score=69.81 Aligned_cols=125 Identities=12% Similarity=0.049 Sum_probs=80.9
Q ss_pred hHHHHHHHhCCCHhHHHHHHHHH-hhhhhhhhhhhhhhcc----cCchHHHHHHH-HHHHHHHHHHHHHH--hhccC---
Q 007665 47 YSKEIKSTLGYDQTTLNLLSTCK-DLGANVGVLSGLLAEV----TPPWLVLLVGS-AMNFGGYFMIWLAV--MKKIA--- 115 (594)
Q Consensus 47 ~~~~l~~~~~~s~~~~~~~~~~~-~~~~~~~~~~G~l~Dr----~G~r~v~~~g~-~l~~ig~~l~~~a~--~~~~~--- 115 (594)
+.+++.+++|++.+..+.+=... ..+.+.+|+.|..+|| |||||.++... ++..++..+...+- .....
T Consensus 54 y~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~ 133 (498)
T KOG0637|consen 54 YLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNE 133 (498)
T ss_pred cccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCc
Confidence 56777888999999988854444 4555679999999997 68887765544 44455555544331 00010
Q ss_pred -C----hhHHHHHHHHHHHhhhhhhhhhhhHhHHhhcC-CCceee-hhHHHHHhhhhHHHHHH
Q 007665 116 -K----PKVWQMCLYICIGANSQNFANTGSLVTCVKNF-PESRGM-MLGLMKGFVGLSGAVFT 171 (594)
Q Consensus 116 -~----~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~f-p~~rg~-~~gi~~~~~glg~~i~~ 171 (594)
. ....++++.-.+.=+....+..++-+++.|.. ++++-+ +.+......++|+.++-
T Consensus 134 ~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY 196 (498)
T KOG0637|consen 134 RKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGY 196 (498)
T ss_pred ccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeee
Confidence 0 11233334445555666677778889999998 443333 88888888888887753
No 254
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=97.65 E-value=0.011 Score=61.88 Aligned_cols=112 Identities=15% Similarity=0.083 Sum_probs=63.4
Q ss_pred chhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhc----------cCcchHHHHHHHHHHH
Q 007665 389 INTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAF----------PKPGSVYVASLLVGFS 458 (594)
Q Consensus 389 a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~----------~~~~~~~~~~~l~G~~ 458 (594)
.-..+..+++++.+||.+..+.. ...+|. ...++..+.=++....++++.. .+++..++..+++|+.
T Consensus 309 ~~i~~~~fNvgD~vGR~~~~~~~-~p~~~~--~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~glt 385 (437)
T TIGR00939 309 PIICFLLFNLFDWLGRSLTSKFM-WPDEDS--RWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFS 385 (437)
T ss_pred HHHHHHHHHHHHHHHhhhhheeE-eeCCCc--cchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHh
Confidence 34567889999999999775431 111111 0111111222222222222211 1234456678899999
Q ss_pred hhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhh
Q 007665 459 YGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRL 505 (594)
Q Consensus 459 ~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l 505 (594)
.|-..+....+..+..+++++-.+..+...+..+|-.+ |. +.+++
T Consensus 386 nGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~-Gs-~l~~~ 430 (437)
T TIGR00939 386 NGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLAL-GA-VLSFL 430 (437)
T ss_pred hhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHH-HH-HHHHH
Confidence 99888777778888887777766666666655555543 54 33443
No 255
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=97.60 E-value=0.00097 Score=65.11 Aligned_cols=128 Identities=11% Similarity=-0.021 Sum_probs=80.2
Q ss_pred chhhhHHHHH-HHhCCCHhHHHH-HHHHHhhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhccCChhH
Q 007665 43 LFGTYSKEIK-STLGYDQTTLNL-LSTCKDLGANV-GVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIAKPKV 119 (594)
Q Consensus 43 ~~~~~~~~l~-~~~~~s~~~~~~-~~~~~~~~~~~-~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~~~~ 119 (594)
+=+...|.+. .+.+++..|+.- +.-...-+.++ -.+.=.+.|..-.|+++++-.+.+.+.+.+.-+. ++.
T Consensus 23 seP~~tpyl~gp~~NlT~~~l~~evyPvwTYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g-------~sV 95 (433)
T KOG3810|consen 23 SEPYLTPYLLGPDKNLTEDQLTNEVYPVWTYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFG-------PSV 95 (433)
T ss_pred CCCccchhccCCCCCccHHHHhcccccchhHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhc-------CCc
Confidence 3344556655 577888888775 32221122223 3366678999999999888655555555544222 677
Q ss_pred HHHHHHHHHHhhhhhhhhhhhHhHHhhcC-CCceeehhHHHHHhhhhHHHHHHHHHHHHh
Q 007665 120 WQMCLYICIGANSQNFANTGSLVTCVKNF-PESRGMMLGLMKGFVGLSGAVFTQIYLAIY 178 (594)
Q Consensus 120 ~~l~~~r~l~G~g~g~~~~~~~~~i~~~f-p~~rg~~~gi~~~~~glg~~i~~~l~~~l~ 178 (594)
+.+-+.-++.|...+.- .+-++++-... |+++-++.|..-+..-.|-.++..+...+.
T Consensus 96 ~~mQvlE~FyG~~tAaE-IAYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLv 154 (433)
T KOG3810|consen 96 KAMQVLEFFYGPATAAE-IAYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLV 154 (433)
T ss_pred hheeeehhhcChHHHHH-HhhhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHh
Confidence 77778888888777643 34455555555 467889999987777566666555554443
No 256
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=97.57 E-value=0.00044 Score=75.94 Aligned_cols=163 Identities=18% Similarity=0.219 Sum_probs=113.9
Q ss_pred eeeccHHHHHH-hcCCCCCcchhhHHHHhhhhhHhhhhhccccHH-HhhhccCCchHHHHHHHHHHHHHHHHHhccC-c-
Q 007665 370 TAIDNLGQIGE-SLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEI-ILLKYKVPRPLIMAISLILSAVGDVLIAFPK-P- 445 (594)
Q Consensus 370 ~~~~~~~~~~~-~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~~~i~~~~~~~~~-~- 445 (594)
++...+..|++ .+|+++..+..++..+....-+..+++|+++|+ +|++ ..+.++.++..++..++.... +
T Consensus 5 Gm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~------~tIl~~~ii~~lG~~llai~a~~~ 78 (654)
T TIGR00926 5 GMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKF------KTILYLSIVYVVGHALLSFGAIPS 78 (654)
T ss_pred ecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH------HHHHHHHHHHHHHHHHHHhccCcc
Confidence 33344444544 478888888888888888888889999999997 4444 456666677777776665431 1
Q ss_pred -------chHHHHHHHHHHHhhhhHHHHHHHHHHhccCCc---cccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhh
Q 007665 446 -------GSVYVASLLVGFSYGAQLTLLFIIISELFGLKY---YSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLA 515 (594)
Q Consensus 446 -------~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~---~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~ 515 (594)
...++.+.+..+|.|+.-+...+...|.+++++ +-..+.+...+.++|+++ ++++.+++.+..
T Consensus 79 ~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSli-s~~i~~~l~~~~------ 151 (654)
T TIGR00926 79 SGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLI-STIITPILRGDV------ 151 (654)
T ss_pred cccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhh------
Confidence 124556777888999888999999999997543 555666777788888865 777777775431
Q ss_pred hhhcccccCCCccccc-ccchHHHHHHHHHHHHHHHHHHHHHH
Q 007665 516 EKGMTRAMVKDLTCIG-RQCYRLSFTILAGVNIFGALITFILV 557 (594)
Q Consensus 516 ~~~~~~~~~~~~~~~~-~~~~~~~f~~~~~~~~~~~~~~~~~~ 557 (594)
.|.| ..+|..+|.+.+++.+++.++....+
T Consensus 152 ------------~~fg~~~~~~~aF~i~~i~m~ia~lvf~~g~ 182 (654)
T TIGR00926 152 ------------GCFGCQDCYPLAFGVPAILMILALIVFMAGS 182 (654)
T ss_pred ------------cccccCcchHHHHHHHHHHHHHHHHHHHHhc
Confidence 0111 13699999999988888877665443
No 257
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=97.55 E-value=0.00047 Score=53.34 Aligned_cols=70 Identities=16% Similarity=0.195 Sum_probs=61.7
Q ss_pred hhhchhhhHHHHHHHhCCCHhHHHHHHHHHhhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHH
Q 007665 40 ATYLFGTYSKEIKSTLGYDQTTLNLLSTCKDLGANV-GVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLA 109 (594)
Q Consensus 40 ~~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a 109 (594)
..|.|++..|.+++|.++|.++.+++.+...+|.+. .+...++.++..+++.+..++++..+..+.+++.
T Consensus 7 gRFayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~ 77 (85)
T PF06779_consen 7 GRFAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALT 77 (85)
T ss_pred HHHHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 478899999999999999999999999999999876 6688888898888999999999988888777654
No 258
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.52 E-value=0.0015 Score=66.26 Aligned_cols=119 Identities=13% Similarity=0.108 Sum_probs=82.9
Q ss_pred cCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhccC-c---chHH-----HHH
Q 007665 382 LGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAFPK-P---GSVY-----VAS 452 (594)
Q Consensus 382 ~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~~~-~---~~~~-----~~~ 452 (594)
+| +...+-+...++.+..+.-.+.+-|+.||+|-| ..+.++..+.+++..+=...+ + ..+. ...
T Consensus 75 Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR------~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq 147 (480)
T KOG2563|consen 75 YG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLR------TALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQ 147 (480)
T ss_pred hc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchH------HHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhH
Confidence 36 555566677889999999999999999999877 467778888888776544332 1 2233 333
Q ss_pred HHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhH
Q 007665 453 LLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDR 508 (594)
Q Consensus 453 ~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~ 508 (594)
.+.+...-....+-+-+..-.|++++|+++..+..+.+.+|.++ +-++...+..+
T Consensus 148 ~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvav-g~llppilV~~ 202 (480)
T KOG2563|consen 148 SIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAV-GFLLPPILVPS 202 (480)
T ss_pred HHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHH-HhhccceecCC
Confidence 44444444444444567778899999999999999999998865 66555555444
No 259
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=97.50 E-value=0.00012 Score=75.59 Aligned_cols=182 Identities=15% Similarity=0.094 Sum_probs=120.6
Q ss_pred HhhchHHHHHHHHHHHhhccccceeeccHHH-HHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHH
Q 007665 347 QALLSIDMLILFLATFCGLGCSLTAIDNLGQ-IGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLI 425 (594)
Q Consensus 347 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~ 425 (594)
+++.+++..++++... .++.+..+++++-+ .+++++-.+..-|......-.+.+..-++.+++.+|+|+-+ +
T Consensus 366 ~~~~s~~~llff~~av-~mG~g~~lv~tFLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~------v 438 (618)
T KOG3762|consen 366 KVFASPHILLFFFVAV-VMGAGVGLVFTFLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVN------V 438 (618)
T ss_pred HHhcCCCEEehhHHHH-HHHHHHHHHHHHHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccc------e
Confidence 4556665544333222 23333444433323 34566655555555555666677777788888888887642 3
Q ss_pred HHHHHHHHHHHHHHHhc-cCcchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhc-cchhhhhhhhhhHHH
Q 007665 426 MAISLILSAVGDVLIAF-PKPGSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQL-ASPLGSYVLNVIVVG 503 (594)
Q Consensus 426 ~~~~~~~~~i~~~~~~~-~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~-~~~lg~~~~gp~~~g 503 (594)
+.+++.+..+=++.+.. .++|.....-++.|+..+..+....++++...|++.+.+++|+... ..++|--+ |.++.|
T Consensus 439 ~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~-GslIGG 517 (618)
T KOG3762|consen 439 MYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGL-GSLIGG 517 (618)
T ss_pred eeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcch-hhhhhh
Confidence 44555555554554443 4566666677999999999999999999999999999999998854 44565543 777778
Q ss_pred hhhhHHHHHhhhhhhcccccCCCcccccccchHHHHHHHHHHHHHHHHHHHHHHhhh
Q 007665 504 RLYDREAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFILVMRT 560 (594)
Q Consensus 504 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 560 (594)
.+.+. .+-+..|.++++.|++..++...+.+..
T Consensus 518 ~~v~~------------------------fg~~ttf~~~giAcl~~l~~~~~iq~~l 550 (618)
T KOG3762|consen 518 FVVER------------------------FGARTTFRIFGIACLVTLALFISIQLLL 550 (618)
T ss_pred hhhee------------------------ehhHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 87776 5677888888888877776666554433
No 260
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=97.37 E-value=0.0025 Score=66.07 Aligned_cols=120 Identities=18% Similarity=0.146 Sum_probs=87.6
Q ss_pred HHHhCCCHhHHHHHHHHHhhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHh
Q 007665 52 KSTLGYDQTTLNLLSTCKDLGANV-GVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIAKPKVWQMCLYICIGA 130 (594)
Q Consensus 52 ~~~~~~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~~~~~~l~~~r~l~G 130 (594)
.+|.+-...-.+.++.....+-+. -++.+++..|+|+-+++.+|+..+++=++..... +|.|+.+-.-+++|
T Consensus 398 led~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L-------~n~W~vLPieilqg 470 (618)
T KOG3762|consen 398 LEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYL-------QNPWMVLPIEILQG 470 (618)
T ss_pred HhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHh-------cCchheeeHHHHHH
Confidence 466776666666555555555554 5588999999999999999888877775544332 67888888999999
Q ss_pred hhhhhhhhhhHhHHhhcCCC-ceeehhHHHH-HhhhhHHHHHHHHHHHHh
Q 007665 131 NSQNFANTGSLVTCVKNFPE-SRGMMLGLMK-GFVGLSGAVFTQIYLAIY 178 (594)
Q Consensus 131 ~g~g~~~~~~~~~i~~~fp~-~rg~~~gi~~-~~~glg~~i~~~l~~~l~ 178 (594)
+..+.++.+..+++....|+ -|..+-|++. ...|+|-.+++.+++.+.
T Consensus 471 it~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v 520 (618)
T KOG3762|consen 471 ITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVV 520 (618)
T ss_pred HHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhh
Confidence 99999999999999999975 4888888863 344555555554444433
No 261
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=97.34 E-value=3.3e-05 Score=82.97 Aligned_cols=180 Identities=17% Similarity=0.160 Sum_probs=2.6
Q ss_pred cHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhccC---------
Q 007665 374 NLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAFPK--------- 444 (594)
Q Consensus 374 ~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~~~--------- 444 (594)
.++++-+..+++..++|.+.+.+-++..+..++..++.+|- +|+.++..+.++++++.+++..++
T Consensus 25 ~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~------hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~ 98 (539)
T PF03137_consen 25 SLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRG------HRPRWIGIGALLMGLGSLLFALPHFLSGPYSYE 98 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhc------CCcceeeecHHHHHHHHHHHhccHhhcCCCccc
Confidence 34555556799999999999999999999998888887663 344567778888877776654321
Q ss_pred ---------------c---------------------------chHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccc
Q 007665 445 ---------------P---------------------------GSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTL 482 (594)
Q Consensus 445 ---------------~---------------------------~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~ 482 (594)
- ..+++..++.|+|....+++-.+++=|..++++.+.-
T Consensus 99 ~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splY 178 (539)
T PF03137_consen 99 EASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLY 178 (539)
T ss_dssp -----------------------------------------------------SSS------------------------
T ss_pred cccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccc
Confidence 0 0123345778888888899999999999999999998
Q ss_pred cchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhhcccccCCCcccccccchHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 007665 483 FNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFILVMRTRR 562 (594)
Q Consensus 483 ~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 562 (594)
.|+......+|..+ |-.+.+.....+.+-...++...-...+++.+.| .|-..|.+.+.+.++..+..+.+.++-++
T Consensus 179 iGi~~~~~~lGPa~-Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvG--AWWLGfli~g~~~~l~aipl~~FPk~lp~ 255 (539)
T PF03137_consen 179 IGILYAMSILGPAL-GFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVG--AWWLGFLICGILLFLSAIPLFFFPKKLPG 255 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hhhhhHHhhccHHH-HHHHHHHHHhceeCCccccccCCCCCCCCccHHH--HHHHHHHHHHHHHHHHHHHHHcCCccCCC
Confidence 89988888888764 6655555544332222111111111123444443 47778888888888777777777655444
No 262
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.19 E-value=0.0015 Score=68.65 Aligned_cols=134 Identities=14% Similarity=0.169 Sum_probs=97.7
Q ss_pred hhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHH--HhhhhHHHHHHHHHHhc
Q 007665 397 SIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAFPKPGSVYVASLLVGF--SYGAQLTLLFIIISELF 474 (594)
Q Consensus 397 ~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~G~--~~g~~~~~~~~~~~~~~ 474 (594)
++...+..++.|.++||+|||. .+........+..+.+.... ++.++ +.++ +.+..++...++++|..
T Consensus 72 ~~~~~i~s~~iG~lSD~~grk~------~L~~~~~~~~l~~~~~~~~~-~~~~~---~~~l~g~~~~~~s~~~a~vadis 141 (463)
T KOG2816|consen 72 GLLTLISSPLIGALSDRYGRKV------VLLLPLFGTILPALCLLFQG-YWFFL---LLGLSGGFSAIFSVGFAYVADIS 141 (463)
T ss_pred HHHHHHHHhhhHHhhhhhhhhh------hHHHHHHHHHHhHHHHHHHH-HHHhh---hcccccchhhhhhhhhhheeecc
Confidence 6788888999999999999984 33444334434333333222 22222 3343 33445566677889999
Q ss_pred cCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhhcccccCCCcccccccchHHHHHHHHHHHHHHHHHHH
Q 007665 475 GLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITF 554 (594)
Q Consensus 475 ~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 554 (594)
..+.|...+|+.+.....+..+ +|.+.+.+... .++...|.+..+..+++.+...
T Consensus 142 ~~~~R~~~~gll~~~~~~~~~~-~p~~~~~~~~~------------------------~~~a~~f~ia~~~~~~~~~y~~ 196 (463)
T KOG2816|consen 142 SEEERSSSIGLLSGTFGAGLVI-GPALGGYLVKF------------------------LGIALVFLIAAASGILSLLYML 196 (463)
T ss_pred chhHHHHHHHHHHHHHHHHHhH-HHHHHHHHHHh------------------------cCchHHHHHHHHHHHHHHHHHh
Confidence 9999999999999988888876 89888888776 6899999999999999999998
Q ss_pred HHHhhhhhccc
Q 007665 555 ILVMRTRRYYS 565 (594)
Q Consensus 555 ~~~~~~~~~~~ 565 (594)
...+|+...+.
T Consensus 197 ~~l~Esl~~~~ 207 (463)
T KOG2816|consen 197 LFLPESLQEKE 207 (463)
T ss_pred hccccccCccc
Confidence 88887765443
No 263
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=97.16 E-value=0.049 Score=54.26 Aligned_cols=136 Identities=11% Similarity=-0.051 Sum_probs=71.6
Q ss_pred HHHHhhhhhhchhhhHHHHHHHhCCCHhHHHHHHHHHhhhhhhhhhhhhhhc-----ccCchHHHHHHHHHHHHHHHHHH
Q 007665 33 LIMAGAGATYLFGTYSKEIKSTLGYDQTTLNLLSTCKDLGANVGVLSGLLAE-----VTPPWLVLLVGSAMNFGGYFMIW 107 (594)
Q Consensus 33 l~~~~~g~~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~~~~G~l~D-----r~G~r~v~~~g~~l~~ig~~l~~ 107 (594)
...+..|..+......|.+-+.-|.|.++.+..+..+.-. ..-+++.++.| |+||||..++=.- ..+|..+..
T Consensus 38 ~LYllQGiP~GL~~~iP~lL~ak~vSyt~~a~fS~ay~P~-sLKllWaPiVDs~y~k~~GrrksWvvp~q-~llG~~mll 115 (510)
T KOG3574|consen 38 FLYLLQGIPLGLIGAIPLLLQAKGVSYTSQAIFSFAYWPF-SLKLLWAPIVDSVYSKRFGRRKSWVVPCQ-YLLGLFMLL 115 (510)
T ss_pred HHHHHcCCchhHhhhhHHHhcCCCcchhhhhhhhhhhhHH-HHHHHHHhhhHHHHHHhhccccceeeehH-HHHHHHHHH
Confidence 3455567666555577888888888888888766554332 23567888888 9999986432111 112222222
Q ss_pred HHHhh------ccCChhHHHHHHHHHHHhhhhhhhhhhhHhHHhhcC-CCceeehhHHHHHhhhhHHHHH
Q 007665 108 LAVMK------KIAKPKVWQMCLYICIGANSQNFANTGSLVTCVKNF-PESRGMMLGLMKGFVGLSGAVF 170 (594)
Q Consensus 108 ~a~~~------~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~f-p~~rg~~~gi~~~~~glg~~i~ 170 (594)
++.+- ....++...+...-++.-+..+.-..+.=...-... |++-|.+..-...+...|-.++
T Consensus 116 Ls~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~ 185 (510)
T KOG3574|consen 116 LSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLG 185 (510)
T ss_pred HhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhh
Confidence 22110 112234444433344455555544433323333333 4566666665555554544443
No 264
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.14 E-value=0.00043 Score=53.04 Aligned_cols=49 Identities=12% Similarity=0.175 Sum_probs=44.1
Q ss_pred eeeccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhc
Q 007665 370 TAIDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKY 418 (594)
Q Consensus 370 ~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~ 418 (594)
.+..+++.++++.|+++.+.+.+.++..+...++.+++|+++||+++++
T Consensus 18 ~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~ 66 (77)
T PF12832_consen 18 CLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRK 66 (77)
T ss_pred HHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccH
Confidence 3455678888999999999999999999999999999999999998874
No 265
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.10 E-value=0.0025 Score=48.84 Aligned_cols=57 Identities=23% Similarity=0.234 Sum_probs=43.7
Q ss_pred chhhhHHHHHHHhCCCHhHHHHHHHHHhhhh-hhhhhhhhhhcccCchHHHHHHHHHH
Q 007665 43 LFGTYSKEIKSTLGYDQTTLNLLSTCKDLGA-NVGVLSGLLAEVTPPWLVLLVGSAMN 99 (594)
Q Consensus 43 ~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr~G~r~v~~~g~~l~ 99 (594)
++-++.|...++.|+|..|++.+.....+.. +..+++|.++||+|+++..+.+..++
T Consensus 18 ~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 18 CLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred HHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 3444556666789999999999665555555 56889999999999999988765543
No 266
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=96.98 E-value=0.0044 Score=65.26 Aligned_cols=157 Identities=20% Similarity=0.227 Sum_probs=102.6
Q ss_pred HHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhc-cC----cchHHH
Q 007665 376 GQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAF-PK----PGSVYV 450 (594)
Q Consensus 376 ~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~-~~----~~~~~~ 450 (594)
+++.+++|+++.+...+.+...+.. ...++.|.++|-+=-+ ++.|++.+.++.++..++...+.. +. .....+
T Consensus 14 ~~l~~~l~ls~~~~~~~~~~~~lPw-~~Kp~~g~lsD~~pi~-G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~ 91 (433)
T PF03092_consen 14 PFLKDDLGLSPAQLQRLSSLASLPW-SIKPLYGLLSDSFPIF-GYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVV 91 (433)
T ss_pred HHHHHHcCCCHHHHHHHHHHHhCch-HHhhhHHhhccccccc-CCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHH
Confidence 3445568999988887777777765 4577789999975211 123345566666666554443332 22 122333
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHhccC--CccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhhcccccCCCcc
Q 007665 451 ASLLVGFSYGAQLTLLFIIISELFGL--KYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGMTRAMVKDLT 528 (594)
Q Consensus 451 ~~~l~G~~~g~~~~~~~~~~~~~~~~--~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~ 528 (594)
..++..+|....-.+.-.+..|.... +.+|...+.......+|+++ +..+.|.+.+.
T Consensus 92 ~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv-~~~l~G~l~~~-------------------- 150 (433)
T PF03092_consen 92 LLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLV-GSLLSGPLLDS-------------------- 150 (433)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHH-HHHhhhhhhhc--------------------
Confidence 44555556655555566677776642 23667777778888888875 78888888877
Q ss_pred cccccchHHHHHHHHHHHHHHHHHHHHHHhh
Q 007665 529 CIGRQCYRLSFTILAGVNIFGALITFILVMR 559 (594)
Q Consensus 529 ~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 559 (594)
.+++..|.+.+.+.++..+..+++..|
T Consensus 151 ----~~~~~~f~i~~~~~~l~~~~~~~~~~e 177 (433)
T PF03092_consen 151 ----FGPQGVFLISAALPLLMLIVALFLLEE 177 (433)
T ss_pred ----CCCeEEehHHHHHHHHHHHHHHHhhhh
Confidence 568888888888877777777777665
No 267
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=96.79 E-value=0.0078 Score=53.09 Aligned_cols=108 Identities=12% Similarity=-0.057 Sum_probs=82.9
Q ss_pred CCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHhhhhHH
Q 007665 385 PQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAFPKPGSVYVASLLVGFSYGAQLT 464 (594)
Q Consensus 385 s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~G~~~g~~~~ 464 (594)
++...-.-.++......+..++.+.+.+++|.| +.++++.+..++-......++.+.++...++.|++.+..+.
T Consensus 35 ~~~~G~~slai~Y~~~~~s~l~~P~iv~~lg~K------~sm~lg~~~y~~y~~~~~~~~~~~l~~~s~l~G~~~a~lW~ 108 (156)
T PF05978_consen 35 SAGLGYYSLAILYGSFAISCLFAPSIVNKLGPK------WSMILGSLGYAIYIASFFYPNSYTLYPASALLGFGAALLWT 108 (156)
T ss_pred cccccHHHHHHHHHHHHHHHHhHHHHHHHHhhH------HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhhhHHhhH
Confidence 333333446777778888889999999999877 56777776666544444455567788889999999999999
Q ss_pred HHHHHHHHhccCCccccccchhhccchhhhhhhhh
Q 007665 465 LLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNV 499 (594)
Q Consensus 465 ~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp 499 (594)
....++.+...++++++..|+.....+.+.++ |.
T Consensus 109 aqg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~-G~ 142 (156)
T PF05978_consen 109 AQGTYLTSYSTEETIGRNTGIFWAIFQSSLIF-GN 142 (156)
T ss_pred hhhHHHHHcCCHHHHhhHHHHHHHHHHHHHHH-HH
Confidence 99999999998999999998887777766543 55
No 268
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=96.77 E-value=0.3 Score=50.83 Aligned_cols=54 Identities=15% Similarity=0.007 Sum_probs=38.6
Q ss_pred HHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHH
Q 007665 455 VGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDRE 509 (594)
Q Consensus 455 ~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~ 509 (594)
..+..-..|....+.-+++.++..-|+-+.+.++..++|+-= -..+.=++.|..
T Consensus 415 ~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtW-P~~~vL~lVD~f 468 (544)
T PF13000_consen 415 SSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTW-PRTFVLWLVDYF 468 (544)
T ss_pred HHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCc-hHHHHHHHhhhc
Confidence 334444566666777778888999999999999999999863 344444555653
No 269
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=96.59 E-value=1.2 Score=48.37 Aligned_cols=105 Identities=13% Similarity=0.094 Sum_probs=69.1
Q ss_pred hhhHHHHHHHhCCCHhHHHH-HHHHHhhhhhhhhhhhhhhccc-CchHHHHHHHHHHHHHHHHHHHHHhhcc--------
Q 007665 45 GTYSKEIKSTLGYDQTTLNL-LSTCKDLGANVGVLSGLLAEVT-PPWLVLLVGSAMNFGGYFMIWLAVMKKI-------- 114 (594)
Q Consensus 45 ~~~~~~l~~~~~~s~~~~~~-~~~~~~~~~~~~~~~G~l~Dr~-G~r~v~~~g~~l~~ig~~l~~~a~~~~~-------- 114 (594)
+.+...+.++++.+...+.- ++.+........+++++++|-| ||-+++.++.++..+|..+..++..-..
T Consensus 58 ~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~ 137 (571)
T KOG1237|consen 58 SNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKF 137 (571)
T ss_pred hHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccC
Confidence 45667788899988866665 4444333334456999999988 8889999999988888555433321110
Q ss_pred -------CChh---HHHHHHHHHHHhhhhhhhhhhhHhHHhhcCC
Q 007665 115 -------AKPK---VWQMCLYICIGANSQNFANTGSLVTCVKNFP 149 (594)
Q Consensus 115 -------~~~~---~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp 149 (594)
..++ ...++....+..+|.|..-+.....-.|-|+
T Consensus 138 ~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd 182 (571)
T KOG1237|consen 138 KPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFD 182 (571)
T ss_pred CCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccC
Confidence 0011 1234445566777888888887788788886
No 270
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=96.33 E-value=0.54 Score=47.99 Aligned_cols=102 Identities=17% Similarity=0.089 Sum_probs=56.5
Q ss_pred CcchhhHHH-HhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHh-------ccCcchHHHHHHHHHHH
Q 007665 387 HTINTFVSL-VSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIA-------FPKPGSVYVASLLVGFS 458 (594)
Q Consensus 387 ~~a~~~~~~-~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~-------~~~~~~~~~~~~l~G~~ 458 (594)
...-..... +++.+.+|++...++.++-.|+. ++..+.=.+..-.+.++. +.+.++......++|+.
T Consensus 282 ~y~~~~~~l~fN~~d~vG~~~a~~~~~~~~r~l-----~i~v~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lgls 356 (406)
T KOG1479|consen 282 WYALLLVFLSFNVFDLIGSILAALLTWPDPRKL-----TIPVLLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMSLLGLS 356 (406)
T ss_pred hhHHHHHHHHhHHHHHhhhhhhhcccCCCCcee-----hHHHHHHHHHHHHHHHhccCCCCceecCchHHHHHHHHHHhc
Confidence 334445556 89999999888877766432221 111111111112222211 12345667778899999
Q ss_pred hhhhHHHHHHHHHHhccCCccccccchhhccchhh
Q 007665 459 YGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLG 493 (594)
Q Consensus 459 ~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg 493 (594)
.|-..++...+.++.++++++-.+-.+.......|
T Consensus 357 nGYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~G 391 (406)
T KOG1479|consen 357 NGYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGG 391 (406)
T ss_pred cchHhhheehhcCCCCChHHHHHHHHHHHHHHHHH
Confidence 88777777777777776555444433433333333
No 271
>PRK03612 spermidine synthase; Provisional
Probab=96.22 E-value=0.054 Score=58.23 Aligned_cols=122 Identities=18% Similarity=0.228 Sum_probs=70.5
Q ss_pred hcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHh----ccC--cchHHHHHHH
Q 007665 381 SLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIA----FPK--PGSVYVASLL 454 (594)
Q Consensus 381 ~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~----~~~--~~~~~~~~~l 454 (594)
-.|-+....+.+.+++-.+..+|..+++++.++..++.. . .-+.++. +..++..++. ... ....+...++
T Consensus 44 ~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~--~-~e~~i~l-~~~~~~~ll~~~~~~~~~~~~~~~~~~~~ 119 (521)
T PRK03612 44 LLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFV--A-VELLLAL-LGGLSALILYAAFAFQGLSRLLLYVLVLL 119 (521)
T ss_pred HhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHH--H-HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 357666666778888888888888888777644333310 0 0011111 1111111111 100 1123344566
Q ss_pred HHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhH
Q 007665 455 VGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDR 508 (594)
Q Consensus 455 ~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~ 508 (594)
.++..|..+|+...+..+.. .++.|...|-++..+.+|+.+ |.++.+++.-.
T Consensus 120 ~~~l~G~~~Pl~~~~~~~~~-~~~~g~~~g~ly~~ntlGa~~-G~l~~~~vLlp 171 (521)
T PRK03612 120 IGLLIGMEIPLLMRILQRIR-DQHLGHNVATVLAADYLGALV-GGLAFPFLLLP 171 (521)
T ss_pred HHHHHHHHHHHHHHHHHhcc-ccchhhhhhhhHhHHhHHHHH-HHHHHHHHHHH
Confidence 78888888877776665432 235677788888888888865 88888887654
No 272
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=96.18 E-value=0.075 Score=52.11 Aligned_cols=127 Identities=21% Similarity=0.273 Sum_probs=82.6
Q ss_pred HHHHHHhcCCCC--CcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhc-cC--cchHH
Q 007665 375 LGQIGESLGYPQ--HTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAF-PK--PGSVY 449 (594)
Q Consensus 375 ~~~~~~~~g~s~--~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~-~~--~~~~~ 449 (594)
.+.+..+.+.+. ...+...+...+...++.++.|.+.||+|||+ .+..+.....++.++... .. ...+.
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (338)
T COG0477 25 LPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRK------VLIIGLLLFLLGTLLLALAPNVGLALLL 98 (338)
T ss_pred HHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchH------HHHHHHHHHHHHHHHHHhCccchHHHHH
Confidence 444455555444 35778888999999999999999999998762 233333222333222222 22 23444
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHhccC-Cccccccchhhc-cchhhhhhhhhhHHHhhhhH
Q 007665 450 VASLLVGFSYGAQLTLLFIIISELFGL-KYYSTLFNCGQL-ASPLGSYVLNVIVVGRLYDR 508 (594)
Q Consensus 450 ~~~~l~G~~~g~~~~~~~~~~~~~~~~-~~~g~~~g~~~~-~~~lg~~~~gp~~~g~l~~~ 508 (594)
+.....|++.+...+....+..+.++. ++++...+.... ...++..+ +|.+.+.+.+.
T Consensus 99 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 158 (338)
T COG0477 99 ILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLAL-GPLLAGLLLGA 158 (338)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 455557888888888889999999987 577888887777 45556543 77555555544
No 273
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=95.78 E-value=0.025 Score=57.78 Aligned_cols=128 Identities=14% Similarity=0.116 Sum_probs=90.7
Q ss_pred eccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhccC-------
Q 007665 372 IDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAFPK------- 444 (594)
Q Consensus 372 ~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~~~------- 444 (594)
.++.++|.+++|++..+.+......-+.+.+-+++.|..+||..-|....| ..+..+..+..++++++....
T Consensus 52 lsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRR-PfI~~~s~~i~~~l~Lig~aaDig~~lg 130 (498)
T KOG0637|consen 52 LSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRR-PFILAGSLLIAVSLFLIGYAADIGLLLG 130 (498)
T ss_pred hccccHHHHHcCCCcccccccccccccccceeccccccccccccccccccc-chHHHhhHHHHHHHhhhhhHhhhhHHhc
Confidence 456789999999999999999999999999999999999997544433222 445566666677766654321
Q ss_pred --c----chHHHHHHHHH-----HHhhhhHHHHHHHHHHhccCCcccc-ccchhhccchhhhhhhhhhH
Q 007665 445 --P----GSVYVASLLVG-----FSYGAQLTLLFIIISELFGLKYYST-LFNCGQLASPLGSYVLNVIV 501 (594)
Q Consensus 445 --~----~~~~~~~~l~G-----~~~g~~~~~~~~~~~~~~~~~~~g~-~~g~~~~~~~lg~~~~gp~~ 501 (594)
. ...-+...+.| +.........=++..|+..++++-+ +.+....+..+|+.+ |-..
T Consensus 131 d~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvL-GY~~ 198 (498)
T KOG0637|consen 131 DNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVL-GYAL 198 (498)
T ss_pred CCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhccee-eeec
Confidence 1 11222333333 4555667777789999998887777 888888888888865 6533
No 274
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.38 E-value=0.01 Score=64.74 Aligned_cols=176 Identities=19% Similarity=0.236 Sum_probs=115.3
Q ss_pred HHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhccC----------
Q 007665 375 LGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAFPK---------- 444 (594)
Q Consensus 375 ~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~~~---------- 444 (594)
+.++-+..+++..+.|++.+.+-+++.+..++..+...|. +|+.++..+.++++++.++...++
T Consensus 120 IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~------HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~ 193 (735)
T KOG3626|consen 120 ITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRG------HRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYEL 193 (735)
T ss_pred hhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhcccc------CccceeeechhHHHHHHHHHhChHHhcCcchhhh
Confidence 3444445689999999999999999998888877766654 344566777777777766554320
Q ss_pred ---------c--------------------------------c--hHHHHHHHHHHHhhhhHHHHHHHHHHhccCCcccc
Q 007665 445 ---------P--------------------------------G--SVYVASLLVGFSYGAQLTLLFIIISELFGLKYYST 481 (594)
Q Consensus 445 ---------~--------------------------------~--~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~ 481 (594)
+ . .+++..++.|+|.-..+++-.+++=|...+++...
T Consensus 194 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~Spl 273 (735)
T KOG3626|consen 194 EVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPL 273 (735)
T ss_pred hhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcH
Confidence 0 0 12233467777777778888888888887788888
Q ss_pred ccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhhcccccCCCcccccccchHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 007665 482 LFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFILVMRTR 561 (594)
Q Consensus 482 ~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~ 561 (594)
-.|+......+|-++ |-++.++....+.+.+. .......+++++.| .|...|.+.+.+.+++.+..+++.++.+
T Consensus 274 Ylgi~~~~~~lGPai-GfllgS~~l~lYvD~~~---~~~~it~~DPrWIG--AWWlGFLi~g~~~~~~a~p~f~fPk~lp 347 (735)
T KOG3626|consen 274 YLGILYSMAILGPAI-GFLLGSFCLKLYVDFGL---SPIGITPTDPRWIG--AWWLGFLICGALLLFSAVPLFFFPKELP 347 (735)
T ss_pred HHHHHHHHHHhhhHH-HHHHHHHHHHeeecccc---CCCCCCCCCcchhh--HHHHHHHHHHHHHHHHHHHHHhCcccCc
Confidence 888887776666654 54444444332222211 11222235566655 5888999999999999888888765544
Q ss_pred h
Q 007665 562 R 562 (594)
Q Consensus 562 ~ 562 (594)
+
T Consensus 348 ~ 348 (735)
T KOG3626|consen 348 K 348 (735)
T ss_pred c
Confidence 3
No 275
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=94.92 E-value=0.0087 Score=59.94 Aligned_cols=99 Identities=15% Similarity=0.162 Sum_probs=3.3
Q ss_pred hhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHH--HHHHHHHHHHHHh------------ccCcchHHHHHHHHH
Q 007665 391 TFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAI--SLILSAVGDVLIA------------FPKPGSVYVASLLVG 456 (594)
Q Consensus 391 ~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~--~~~~~~i~~~~~~------------~~~~~~~~~~~~l~G 456 (594)
..+..+++++.+||.+.++..- .+++ ++++... .=++. +-+++++ ..+++..++..+++|
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~-~~~~----~~~l~~~s~~R~~f-iPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g 259 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRW-PGPS----PRWLWILSLLRFLF-IPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFG 259 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEe-cccc----cccHHHHHHHHHHH-HHHHHHHHhhcccccCCCcccchHHHHHHHHHHH
Confidence 3567899999999999887522 2111 1122211 11111 1111111 112344566678999
Q ss_pred HHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhh
Q 007665 457 FSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSY 495 (594)
Q Consensus 457 ~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ 495 (594)
+..|-..+....+.++..+++++..+-.+....-.+|-.
T Consensus 260 ~TNGyl~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~ 298 (309)
T PF01733_consen 260 FTNGYLSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLF 298 (309)
T ss_dssp -------HHHH----------------------------
T ss_pred HccchhhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHH
Confidence 999988888888888888877776665555555555543
No 276
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=94.88 E-value=0.078 Score=54.70 Aligned_cols=107 Identities=17% Similarity=0.213 Sum_probs=79.4
Q ss_pred HHHHHHHHHHHHHHHHhc---cC-------cchHHHHHHHHHHHhhhhHHHHHHHHHHhccCCc---cccccchhhccch
Q 007665 425 IMAISLILSAVGDVLIAF---PK-------PGSVYVASLLVGFSYGAQLTLLFIIISELFGLKY---YSTLFNCGQLASP 491 (594)
Q Consensus 425 ~~~~~~~~~~i~~~~~~~---~~-------~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~---~g~~~g~~~~~~~ 491 (594)
.+.++.++.++|.+++.. +. ...+++.+.++++|.|+.=+......+|.|++++ +...+.....+.+
T Consensus 3 tI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in 82 (372)
T PF00854_consen 3 TILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGIN 82 (372)
T ss_dssp HHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHh
Confidence 456677777777776432 11 1357888899999999999999999999998663 4445556678889
Q ss_pred hhhhhhhhhHHHhhhhHHHHHhhhhhhcccccCCCcccccccchHHHHHHHHHHHHHHHHHHHHH
Q 007665 492 LGSYVLNVIVVGRLYDREAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFIL 556 (594)
Q Consensus 492 lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 556 (594)
+|+++ ++.+.+++.+. .+|...|.+.++..+++.+..+.-
T Consensus 83 ~G~~~-~~~~~~~i~~~------------------------~~~~~~f~i~~~~~~~~~~~f~~~ 122 (372)
T PF00854_consen 83 IGSLF-SPTLVPYIQQN------------------------YGWFLGFGIPAIGMLLALIVFLSG 122 (372)
T ss_dssp HHHHH-HHHCCCHHHHC------------------------S-HHHHHHHHHHHHHHHHHHHHCC
T ss_pred hhhHh-hcccchhhccc------------------------cchhhhhhHHHHHHHHHHHHHHhC
Confidence 99865 77788887765 689999999999888887765544
No 277
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=94.83 E-value=6.7 Score=41.82 Aligned_cols=62 Identities=11% Similarity=0.079 Sum_probs=40.6
Q ss_pred HHHHHHHhCC---CHhHHHHHHHHHh--hhhhhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHH
Q 007665 48 SKEIKSTLGY---DQTTLNLLSTCKD--LGANVGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLA 109 (594)
Q Consensus 48 ~~~l~~~~~~---s~~~~~~~~~~~~--~~~~~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a 109 (594)
..+++|.+=+ +.+.+.++=+... ...++..+..++++++++++++-+....+...+.++++.
T Consensus 43 lR~~KD~lvvt~~gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~v 109 (491)
T PF03219_consen 43 LRDLKDTLVVTAQGAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFV 109 (491)
T ss_pred HHHhcCeEEEecCChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3555554433 4455555433332 333557799999999999999888777777776666554
No 278
>PRK03612 spermidine synthase; Provisional
Probab=94.25 E-value=7.8 Score=41.86 Aligned_cols=146 Identities=13% Similarity=-0.000 Sum_probs=71.3
Q ss_pred HHHHhCCCHhHHHHHHHHHhhhh-hhhhhhhhhhcccCchHHHHHHHHHHHHH---HHHHHHHHhhccCChhHHH-HHHH
Q 007665 51 IKSTLGYDQTTLNLLSTCKDLGA-NVGVLSGLLAEVTPPWLVLLVGSAMNFGG---YFMIWLAVMKKIAKPKVWQ-MCLY 125 (594)
Q Consensus 51 l~~~~~~s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr~G~r~v~~~g~~l~~ig---~~l~~~a~~~~~~~~~~~~-l~~~ 125 (594)
+.--+|.+..+.+.+.+.++.+. +.+.+++++.++.-++.. .+-+.+..++ ..+..... ... ..+.. ++..
T Consensus 41 l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~-~~e~~i~l~~~~~~~ll~~~~-~~~--~~~~~~~~~~ 116 (521)
T PRK03612 41 ASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFV-AVELLLALLGGLSALILYAAF-AFQ--GLSRLLLYVL 116 (521)
T ss_pred HHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHH-HHHHHHHHHHHHHHHHHHHHH-HHH--HHHHHHHHHH
Confidence 44557777777777544444544 446667766533222221 1111111111 11111110 000 11111 2233
Q ss_pred HHHHhhhhhhhhhhhHhHHhhcCCCceeehhHHHHHhhhhHHHHHHHHHHHHhC-C-ChHHHHHHHHHHHHHHHHHH
Q 007665 126 ICIGANSQNFANTGSLVTCVKNFPESRGMMLGLMKGFVGLSGAVFTQIYLAIYG-N-DAKSMILLIAWLPALVSLVF 200 (594)
Q Consensus 126 r~l~G~g~g~~~~~~~~~i~~~fp~~rg~~~gi~~~~~glg~~i~~~l~~~l~~-~-~~~~~~~~~~~~~~~~~l~~ 200 (594)
-++.++-.|+..|....+..+...++-|...|-+.+...+|+++++.+.+.++- . +.....+..+.+....+++.
T Consensus 117 ~~~~~~l~G~~~Pl~~~~~~~~~~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a~~~ 193 (521)
T PRK03612 117 VLLIGLLIGMEIPLLMRILQRIRDQHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAALVF 193 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence 345566666666555555444333345667777777778999998888876654 2 33445555555554444433
No 279
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=93.68 E-value=2 Score=45.02 Aligned_cols=116 Identities=20% Similarity=0.255 Sum_probs=82.9
Q ss_pred hCCCHhHHHH-HHHHHhhhhhh-hhhhhhhh---cccCchHHHHHHHHHHHHHHHHHHHHHhhccC-----------Chh
Q 007665 55 LGYDQTTLNL-LSTCKDLGANV-GVLSGLLA---EVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIA-----------KPK 118 (594)
Q Consensus 55 ~~~s~~~~~~-~~~~~~~~~~~-~~~~G~l~---Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~-----------~~~ 118 (594)
.+.+...+-. ......++.+. +.+.+.+. +++|+++++.++..+..+++++..+.....++ .++
T Consensus 273 ~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~ 352 (461)
T KOG3098|consen 273 LGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPS 352 (461)
T ss_pred ccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccc
Confidence 3444443333 33333344433 55555554 66799999999999999998887665543331 124
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhHhHHhhcCCCceeehhHHHHHhhhhHHHHH
Q 007665 119 VWQMCLYICIGANSQNFANTGSLVTCVKNFPESRGMMLGLMKGFVGLSGAVF 170 (594)
Q Consensus 119 ~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp~~rg~~~gi~~~~~glg~~i~ 170 (594)
+...++..++.|++-+......+.++...+|++|..+..+.....++++.+.
T Consensus 353 ~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~~~~~~~~fsi~kfyq~~~s~v~ 404 (461)
T KOG3098|consen 353 YYLALIIGFLLGFGDACFNTQRYVIIALLYPDDRAQAFSLFKFYQSVASCVA 404 (461)
T ss_pred hhHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHH
Confidence 5667788999999999999999999999999999999999887777776654
No 280
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=93.49 E-value=0.52 Score=48.46 Aligned_cols=158 Identities=12% Similarity=0.127 Sum_probs=98.2
Q ss_pred HHHHHHh--cCCCCCcchhh-HHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhccC-cchHHH
Q 007665 375 LGQIGES--LGYPQHTINTF-VSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAFPK-PGSVYV 450 (594)
Q Consensus 375 ~~~~~~~--~g~s~~~a~~~-~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~ 450 (594)
+..|+.+ .|++..+..-- .-+-.=...+.-+....++|.++-| .+++++.+...+...++...+ ...+-+
T Consensus 26 l~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Yk------pviil~~~~~i~t~~lll~~~sv~~mq~ 99 (412)
T PF01770_consen 26 LTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYK------PVIILQALSYIITWLLLLFGTSVLAMQL 99 (412)
T ss_pred chHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhh------HHHHHHHHHHHHHHHHHHHHCcHHHHHH
Confidence 3344443 68877765432 2333333444555677889998765 455555555555555544443 455556
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhhcccccCCCcccc
Q 007665 451 ASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGMTRAMVKDLTCI 530 (594)
Q Consensus 451 ~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (594)
.-+..|+..+.-. ..++++=...++++.-++.+......-+|.++ +..++-.+....
T Consensus 100 ~q~~yg~~~a~ev-ay~sYiys~v~~~~yq~vts~~raa~l~g~~~-s~~lgQllvs~~--------------------- 156 (412)
T PF01770_consen 100 MQFFYGLATAAEV-AYYSYIYSVVDKEHYQKVTSYTRAATLVGRFI-SSLLGQLLVSFG--------------------- 156 (412)
T ss_pred HHHHHHHHHHHHH-HHHHHheeecCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhc---------------------
Confidence 6677787776643 44566656678888888888777766666654 443333333321
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 007665 531 GRQCYRLSFTILAGVNIFGALITFILVMRTRR 562 (594)
Q Consensus 531 ~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 562 (594)
..+|...+++..+...++.+.++++++.+|.
T Consensus 157 -~~sy~~L~~isl~~~~~a~~~~~fLP~~~~S 187 (412)
T PF01770_consen 157 -GVSYFQLNYISLASVSLALLIALFLPMPKRS 187 (412)
T ss_pred -CCCHHHHHHHHHHHHHHHHHHHHHcCCCCcc
Confidence 2579999999888888888888888765543
No 281
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=93.28 E-value=0.14 Score=39.76 Aligned_cols=67 Identities=12% Similarity=0.115 Sum_probs=52.0
Q ss_pred ccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhccCc
Q 007665 373 DNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAFPKP 445 (594)
Q Consensus 373 ~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 445 (594)
..+|...++.++|..+++.+.+...++..+|.+...++.++..++ ..+..+.+...+..+.+...+.
T Consensus 13 plLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~------~~~~~~l~~~~~~~~~ma~~~~ 79 (85)
T PF06779_consen 13 PLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPR------RLLRAGLLLTVLSTAAMALTHS 79 (85)
T ss_pred hHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHH------HHHHHHHHHHHHHHHHHHHHhc
Confidence 356888888999999999999999999999999999887764333 4566777777777766665443
No 282
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=93.20 E-value=1 Score=45.25 Aligned_cols=196 Identities=11% Similarity=0.060 Sum_probs=95.4
Q ss_pred HHHHHHHHHhhccccceeeccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccH-----HHhhhccCCchHHHHH
Q 007665 354 MLILFLATFCGLGCSLTAIDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSE-----IILLKYKVPRPLIMAI 428 (594)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~d-----r~g~r~~~~~~~~~~~ 428 (594)
+.++.+.+..+ +.-+.+...+|.+++..|.|-.+-+.+..++.=. --.+++..+.| |+|||+.+-.+.-..+
T Consensus 33 illLl~LYllQ-GiP~GL~~~iP~lL~ak~vSyt~~a~fS~ay~P~--sLKllWaPiVDs~y~k~~GrrksWvvp~q~ll 109 (510)
T KOG3574|consen 33 ILLLLFLYLLQ-GIPLGLIGAIPLLLQAKGVSYTSQAIFSFAYWPF--SLKLLWAPIVDSVYSKRFGRRKSWVVPCQYLL 109 (510)
T ss_pred HHHHHHHHHHc-CCchhHhhhhHHHhcCCCcchhhhhhhhhhhhHH--HHHHHHHhhhHHHHHHhhccccceeeehHHHH
Confidence 33333333333 3445556688999997777655544443333222 23568888999 8998865333333333
Q ss_pred HHHHHHHHHHHHh-cc-C---cc--hHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhH
Q 007665 429 SLILSAVGDVLIA-FP-K---PG--SVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIV 501 (594)
Q Consensus 429 ~~~~~~i~~~~~~-~~-~---~~--~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~ 501 (594)
+..+..++...-- .. + +. ......+++-+..+..=...-.+......+++.|-++.....+...|-++ +-.+
T Consensus 110 G~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL-~~~i 188 (510)
T KOG3574|consen 110 GLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFL-GNVV 188 (510)
T ss_pred HHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHh-hcce
Confidence 3333222221100 01 1 11 12223344455544444455556666677788887776666565655543 3222
Q ss_pred HHhhhhHHHHHhhhhhhcccccCCCcccccccchHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 007665 502 VGRLYDREAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFILVMRTR 561 (594)
Q Consensus 502 ~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~ 561 (594)
+=.+-.. +=+++. .+.. +..+|...-..-.++.+.+.+++..+..+..++..
T Consensus 189 fLaL~s~----dF~N~y---~rs~-P~~~g~ItL~gy~~fwg~~~~vat~Lv~~~kke~~ 240 (510)
T KOG3574|consen 189 FLALESP----DFCNTY---LRSI-PLDQGFITLAGYLWFWGALFIVATTLVALLKKEND 240 (510)
T ss_pred eeEecCh----hhhhHH---HhcC-cCccceEEhhHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 2111111 000000 0000 01123344555667777777777777666655443
No 283
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=92.81 E-value=0.4 Score=45.60 Aligned_cols=88 Identities=13% Similarity=0.078 Sum_probs=55.5
Q ss_pred HHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhc----cCcchHHHHHH
Q 007665 378 IGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAF----PKPGSVYVASL 453 (594)
Q Consensus 378 ~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~----~~~~~~~~~~~ 453 (594)
+++..|+...+.+.++.......+.-..+.|.+.||.|||+. .. ..++.+.+.+. +....+++.-+
T Consensus 63 LYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKra---cv-------tycitYiLsCiTKhSpqYkVLmVGR~ 132 (454)
T KOG4332|consen 63 LYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRA---CV-------TYCITYILSCITKHSPQYKVLMVGRV 132 (454)
T ss_pred eehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccc---ee-------eehHHHHHHHHhhcCCceEEEeehhh
Confidence 355678777888777655555555555667889999999852 11 12223333222 22346777888
Q ss_pred HHHHHhhhhHHHHHH-HHHHhcc
Q 007665 454 LVGFSYGAQLTLLFI-IISELFG 475 (594)
Q Consensus 454 l~G~~~g~~~~~~~~-~~~~~~~ 475 (594)
+-|+.....|+..-+ +++|...
T Consensus 133 LGGiaTsLLFSaFEsWliaEHne 155 (454)
T KOG4332|consen 133 LGGIATSLLFSAFESWLIAEHNE 155 (454)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhh
Confidence 889988888887765 4566553
No 284
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=92.35 E-value=1.6 Score=46.26 Aligned_cols=46 Identities=7% Similarity=0.069 Sum_probs=38.1
Q ss_pred hhHH-HHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhh
Q 007665 461 AQLT-LLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYD 507 (594)
Q Consensus 461 ~~~~-~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~ 507 (594)
...+ +....+.|.+..++..+-++++..+.++|..+ ++.+..++.+
T Consensus 144 ~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~-sg~~~~~~~~ 190 (472)
T TIGR00769 144 VVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIF-SGRTIKYFSK 190 (472)
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 3444 77789999999999999999999999999975 7777777654
No 285
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=91.82 E-value=6.7 Score=41.03 Aligned_cols=126 Identities=11% Similarity=0.023 Sum_probs=80.2
Q ss_pred hhchhhhHHHHHHHhCCCHhHHHHHHHHHhhhh-hhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhccC---C
Q 007665 41 TYLFGTYSKEIKSTLGYDQTTLNLLSTCKDLGA-NVGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIA---K 116 (594)
Q Consensus 41 ~~~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~---~ 116 (594)
...++.....+...-|+++..++.+-....+.. ....+..++.+|+|..+.-++++..-.+...++-.++..... .
T Consensus 274 VLsf~~lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~ 353 (432)
T PF06963_consen 274 VLSFGGLMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSS 353 (432)
T ss_pred HhcCcHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchh
Confidence 345565555555666999999999655555544 457799999999999999888888666555554333322211 1
Q ss_pred hhHHHHHHHHHHHhhhhhhhhhhhHhHHhhcCCC-ceeehhHHHHHhhhhH
Q 007665 117 PKVWQMCLYICIGANSQNFANTGSLVTCVKNFPE-SRGMMLGLMKGFVGLS 166 (594)
Q Consensus 117 ~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp~-~rg~~~gi~~~~~glg 166 (594)
.+...++.+-++.=+|-=....+...++.|..|+ +||...|.-.+...+-
T Consensus 354 ~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf 404 (432)
T PF06963_consen 354 ISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLF 404 (432)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHH
Confidence 1233333333444444434556667778888884 7999999866655443
No 286
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=91.01 E-value=1.2 Score=46.00 Aligned_cols=113 Identities=12% Similarity=0.060 Sum_probs=75.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccC--ChhHHHHHHHHHHHhhhhhhhhhhhHhHHhhcCCCc----eeehhHHHHHhh
Q 007665 90 LVLLVGSAMNFGGYFMIWLAVMKKIA--KPKVWQMCLYICIGANSQNFANTGSLVTCVKNFPES----RGMMLGLMKGFV 163 (594)
Q Consensus 90 ~v~~~g~~l~~ig~~l~~~a~~~~~~--~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp~~----rg~~~gi~~~~~ 163 (594)
|++++|.++..+|.++..++...... +.....++++-.+.++|.|+.=+.......|.|+++ |.....++..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 56778999999998886544222111 112356677778899999999999999999999532 455666677777
Q ss_pred hhHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHH
Q 007665 164 GLSGAVFTQIYLAIYGNDAKSMILLIAWLPALVSLVFVY 202 (594)
Q Consensus 164 glg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~l~~~~ 202 (594)
.+|+.++..+..++-++..|.+-+.++....+.+++.+.
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~ 120 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFL 120 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHH
Confidence 788888776666776677777777766555555554433
No 287
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=90.12 E-value=11 Score=38.96 Aligned_cols=115 Identities=12% Similarity=0.083 Sum_probs=72.8
Q ss_pred hCCCHhHHHHHHHHHhhhhhhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHhhhhh
Q 007665 55 LGYDQTTLNLLSTCKDLGANVGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIAKPKVWQMCLYICIGANSQN 134 (594)
Q Consensus 55 ~~~s~~~~~~~~~~~~~~~~~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~~~~~~l~~~r~l~G~g~g 134 (594)
+.-...+..+....+.+|-+.+=-...+. | -|++.+...+-..-..++..-+.-... ++.+..++.-+..|+-.|
T Consensus 276 ~~~~r~~Y~~Y~~~YQ~GVFISRSS~~~~-r--ir~lwils~LQ~~nl~~~~l~s~~~fi--psi~ivf~lif~eGLlGG 350 (402)
T PF02487_consen 276 FFSPRDQYRWYQLLYQLGVFISRSSLPFF-R--IRRLWILSLLQVINLVFLLLQSWYRFI--PSIWIVFVLIFYEGLLGG 350 (402)
T ss_pred CCCHHHHHHHHHHHHHHHHhhhhcceeee-e--hhhHHHHHHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHhhh
Confidence 33345667777777777764321111121 3 355555554433222222111111222 577888888888999999
Q ss_pred hhhhhhHhHHhhcCC-CceeehhHHHHHhhhhHHHHHHHHH
Q 007665 135 FANTGSLVTCVKNFP-ESRGMMLGLMKGFVGLSGAVFTQIY 174 (594)
Q Consensus 135 ~~~~~~~~~i~~~fp-~~rg~~~gi~~~~~glg~~i~~~l~ 174 (594)
..|..+...+.+..| ++|..++|....+-++|..+++.+.
T Consensus 351 a~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~ 391 (402)
T PF02487_consen 351 ASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLG 391 (402)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 999999999988886 6899999999999888877766443
No 288
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=83.86 E-value=10 Score=38.93 Aligned_cols=123 Identities=11% Similarity=0.028 Sum_probs=54.8
Q ss_pred ccceeeccHHHHHHhcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHh-ccC-
Q 007665 367 CSLTAIDNLGQIGESLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIA-FPK- 444 (594)
Q Consensus 367 ~~~~~~~~~~~~~~~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~-~~~- 444 (594)
...+++...+++.+..-.++. +..+...+.++..+..++.-.+--+...|.+......+....++..+.+.+.. ...
T Consensus 33 pWN~fiTa~~y~~~~~~~~~~-~~~F~~~~~~~a~i~~ll~~~~n~~~~~~~~~~~~~~l~~~~il~i~~l~~~~v~~~~ 111 (406)
T KOG1479|consen 33 PWNMFITASDYYYYRFPGYHN-SKNFTSSYTLAAQIPLLLFNLLNAFLNTRLRTRVGYLLSLIAILFIVTLDLALVKTDT 111 (406)
T ss_pred chHhhhccHHHHHhhcCCCch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 445555555666665532222 44445556666666666655555554444211111112221111111111111 111
Q ss_pred -c----chHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhh
Q 007665 445 -P----GSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSY 495 (594)
Q Consensus 445 -~----~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ 495 (594)
. ....+..++++++.+.....+....+ .+|+|.... +..+.+++|.
T Consensus 112 ~~~~ff~vt~~~vv~~~~a~a~~qgs~~G~a~-~~P~~ytqa----vm~G~a~aG~ 162 (406)
T KOG1479|consen 112 WTNGFFLVTLIIVVLLNLANAVVQGSLYGLAG-LFPSEYTQA----VMSGQALAGT 162 (406)
T ss_pred ccchhHHHHHHHHHHHhhhhhhhccchhhhhh-cCCHHHHHH----HHhcchhHhH
Confidence 1 12334456677777776666666554 455554322 2344455553
No 289
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=78.80 E-value=25 Score=34.75 Aligned_cols=55 Identities=15% Similarity=0.152 Sum_probs=37.0
Q ss_pred chHHHHHHHHHHHhhhhHHHHHHHHHHhccCCccccccchhhccchhhhhhhhhhH
Q 007665 446 GSVYVASLLVGFSYGAQLTLLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIV 501 (594)
Q Consensus 446 ~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~ 501 (594)
+..++..+.-|+-.|..+.-..--+.+-.++++|--+++.+.+.-.+|-.+ +.++
T Consensus 343 ~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~l-A~~l 397 (409)
T KOG3880|consen 343 WIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFL-AGLL 397 (409)
T ss_pred HHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHH-HHHH
Confidence 444445556677666666555555666667789999999998888888754 4433
No 290
>KOG3817 consensus Uncharacterized conserved protein [Function unknown]
Probab=77.51 E-value=19 Score=35.59 Aligned_cols=51 Identities=16% Similarity=0.085 Sum_probs=25.1
Q ss_pred hhHHHHHHHHHHHhhhhhhhhhhhHhHHhhcCCCceeehhHHHHHhhhhHHHHH
Q 007665 117 PKVWQMCLYICIGANSQNFANTGSLVTCVKNFPESRGMMLGLMKGFVGLSGAVF 170 (594)
Q Consensus 117 ~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp~~rg~~~gi~~~~~glg~~i~ 170 (594)
.|..+.+..+...|+-..... ...++.+.+||+ ....+++.+++.++--+.
T Consensus 158 rn~vFYYssG~v~GilaSLl~--Viflv~rf~PKk-t~~~~iliGgWs~slY~i 208 (452)
T KOG3817|consen 158 RNSVFYYSSGIVIGILASLLV--VIFLVARFFPKK-TMMYGILIGGWSISLYVI 208 (452)
T ss_pred cCceEEEecccHHHHHHHHHH--HHHHHHHhcccc-cceEEEEEccchhHHHHH
Confidence 444444444555555444332 234456778865 333445445555554443
No 291
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=76.17 E-value=77 Score=30.56 Aligned_cols=23 Identities=13% Similarity=-0.164 Sum_probs=17.2
Q ss_pred ccHHHhhchHHHHHHHHHHHhhc
Q 007665 343 YGILQALLSIDMLILFLATFCGL 365 (594)
Q Consensus 343 ~~~~~~l~~~~~~~~~~~~~~~~ 365 (594)
.+..+.+|++..|...+.+....
T Consensus 85 ~s~~~~LK~K~tw~w~~~Yg~wL 107 (267)
T PF07672_consen 85 PSYKSILKEKETWKWILIYGIWL 107 (267)
T ss_pred chHHHHHccchHHHHHHHHHHHh
Confidence 46689999999888777665543
No 292
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=75.29 E-value=8.9 Score=41.79 Aligned_cols=158 Identities=18% Similarity=0.232 Sum_probs=98.7
Q ss_pred ceeeccHHHHHH-hcCCCCCcchhhHHHHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhc-----
Q 007665 369 LTAIDNLGQIGE-SLGYPQHTINTFVSLVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAF----- 442 (594)
Q Consensus 369 ~~~~~~~~~~~~-~~g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~----- 442 (594)
+.+..++..|+. .++.+...+.-.+..+........+++++++|-+--|+ +.+.++.++..++..++..
T Consensus 54 ~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry-----~tI~~~s~i~~~G~~~lt~~a~~~ 128 (571)
T KOG1237|consen 54 FGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRY-----FTINIGSLISLLGLFGLTLSAMIP 128 (571)
T ss_pred hcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHH-----HHHHHHHHHHHHHHHHHHHHHHhh
Confidence 344455555554 56777777778888888888888899999999764332 5666666666665443321
Q ss_pred ---c------------C-c-----chHHHHHHHHHHHhhhhHHHHHHHHHHhccCCcc----c--cccchhhccchhhhh
Q 007665 443 ---P------------K-P-----GSVYVASLLVGFSYGAQLTLLFIIISELFGLKYY----S--TLFNCGQLASPLGSY 495 (594)
Q Consensus 443 ---~------------~-~-----~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~----g--~~~g~~~~~~~lg~~ 495 (594)
+ . + ..++..+.+..+|.|+.-+.....-+|-|+.+.. . .-+.-.....++|..
T Consensus 129 ~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l 208 (571)
T KOG1237|consen 129 ALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGAL 208 (571)
T ss_pred hcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHH
Confidence 0 0 0 1345556666778888888888888888883222 2 223333445555554
Q ss_pred hhhhhHHHhhhhHHHHHhhhhhhcccccCCCcccccccchHHHHHHHHHHHHHHHHHHHHH
Q 007665 496 VLNVIVVGRLYDREAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNIFGALITFIL 556 (594)
Q Consensus 496 ~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 556 (594)
+ +..+.-++-|. .+|...|.+..++.+++.++.+..
T Consensus 209 ~-a~t~~vyiq~~------------------------~~w~lgf~i~~~~~~lai~iF~~g 244 (571)
T KOG1237|consen 209 L-AQTVLVYIQDN------------------------VGWKLGFGIPTVLNALAILIFLPG 244 (571)
T ss_pred H-HHHHHHhhhhc------------------------ccceeeccHHHHHHHHHHHHHHcC
Confidence 3 33333333333 678888888888887777666554
No 293
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=74.10 E-value=64 Score=32.46 Aligned_cols=114 Identities=20% Similarity=0.284 Sum_probs=58.8
Q ss_pred HHHHHHHhhccccceeeccHHHHHHhc-CCCCCcchhhHHHHhhhhhHhhhhhccccHHHh-hhccCCchHHHHHHHHHH
Q 007665 356 ILFLATFCGLGCSLTAIDNLGQIGESL-GYPQHTINTFVSLVSIWNYFGRVFAGFVSEIIL-LKYKVPRPLIMAISLILS 433 (594)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g-~r~~~~~~~~~~~~~~~~ 433 (594)
.+.++.+....++...-..+..+...+ |-.--+.+.+.+.+-....+|..+.-++.|.-. .|.. ..=+.++.+..
T Consensus 11 lL~laVf~~aa~GlvyElal~tLatyLlG~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv---~vElllgligg 87 (508)
T COG4262 11 LLLLAVFVCAACGLVYELALGTLATYLLGGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFV---DVELLLGLIGG 87 (508)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHhcCCceeehHHHHHHHHHHhchhhhhhccccCchHHHHHH---HHHHHHHHhcc
Confidence 333333333333333333334444443 444466677777777777788887776666421 1110 00011122111
Q ss_pred ---HHHHHHHhccC---cchHHHHHHHHHHHhhhhHHHHHHHHHH
Q 007665 434 ---AVGDVLIAFPK---PGSVYVASLLVGFSYGAQLTLLFIIISE 472 (594)
Q Consensus 434 ---~i~~~~~~~~~---~~~~~~~~~l~G~~~g~~~~~~~~~~~~ 472 (594)
.+.++.++... .+.++....++|.-.|.-.|+...+...
T Consensus 88 ~Sa~~ly~~FA~~~~~~~~Vly~lt~vIG~LVG~EiPL~mrml~~ 132 (508)
T COG4262 88 VSAAALYLLFALESAPSRLVLYALTAVIGVLVGAEIPLLMRMLQR 132 (508)
T ss_pred chHHHHHHHHHhccchHHHHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 11111222222 2456777888999899888888887765
No 294
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=67.92 E-value=15 Score=38.74 Aligned_cols=84 Identities=10% Similarity=0.051 Sum_probs=41.6
Q ss_pred HHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhhHHHHHhhhhhhcccccCCCcccccccchHHHHHHHHHHHH
Q 007665 468 IIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYDREAMKQLAEKGMTRAMVKDLTCIGRQCYRLSFTILAGVNI 547 (594)
Q Consensus 468 ~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~ 547 (594)
.++-.+..+++.+-++.....+.+.|-++ +-.++=.+-+..-.+ +.. + +.+...|..+...-+.+.+.+.+
T Consensus 141 GWALT~Ls~~n~~~ASTcqtvG~~~Gyfl-s~tvFlalns~~f~N----ky~-r---~~p~~~glvtl~~yl~fwg~~~l 211 (544)
T PF13000_consen 141 GWALTMLSPENVGYASTCQTVGQTAGYFL-SFTVFLALNSPDFCN----KYL-R---STPSDEGLVTLSGYLKFWGWVFL 211 (544)
T ss_pred hhhhhhcChhhcchHHHHHHhHhhhhHHH-HHHHHHhhCCHHHHH----Hhc-c---cCCCCCCeeeHHHHHHHHHHHHH
Confidence 34445566788777776666666666554 433333333221100 000 0 00111233444455567777777
Q ss_pred HHHHHHHHHHhhh
Q 007665 548 FGALITFILVMRT 560 (594)
Q Consensus 548 ~~~~~~~~~~~~~ 560 (594)
+..+...++.+|.
T Consensus 212 ~~T~~v~~~k~E~ 224 (544)
T PF13000_consen 212 IVTILVAFFKKEK 224 (544)
T ss_pred HHHHHHheEeecc
Confidence 7777776665553
No 295
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=61.77 E-value=16 Score=29.40 Aligned_cols=33 Identities=21% Similarity=-0.056 Sum_probs=22.9
Q ss_pred HHHHhhhhhhhhhhhhhhccc-CchHHHHHHHHH
Q 007665 66 STCKDLGANVGVLSGLLAEVT-PPWLVLLVGSAM 98 (594)
Q Consensus 66 ~~~~~~~~~~~~~~G~l~Dr~-G~r~v~~~g~~l 98 (594)
++=+..+.+++...|++.||| |.++..++..++
T Consensus 49 ssefIsGilVGa~iG~llD~~agTsPwglIv~ll 82 (116)
T COG5336 49 SSEFISGILVGAGIGWLLDKFAGTSPWGLIVFLL 82 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHH
Confidence 333334446688999999998 777777665555
No 296
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=61.03 E-value=1.6e+02 Score=28.40 Aligned_cols=103 Identities=9% Similarity=0.010 Sum_probs=46.5
Q ss_pred HHHHhhhhhhhh-hhhhhhccc-CchHHHH----HHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHhhhhhhhhhh
Q 007665 66 STCKDLGANVGV-LSGLLAEVT-PPWLVLL----VGSAMNFGGYFMIWLAVMKKIAKPKVWQMCLYICIGANSQNFANTG 139 (594)
Q Consensus 66 ~~~~~~~~~~~~-~~G~l~Dr~-G~r~v~~----~g~~l~~ig~~l~~~a~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~ 139 (594)
...+..+.+.+| ..|+....- -||+-+. +|.++..+..+. . ..-+.....++..++++.++.|+-.=.+. +
T Consensus 147 ~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~-~-~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ-~ 223 (267)
T PF07672_consen 147 QILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVV-V-YFVGPGNAAGFAFFYIFGFLAGFFLWGIQ-G 223 (267)
T ss_pred HHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHH-H-HHhCcchHHHHHHHHHHHHHHHHHHHhhh-H
Confidence 444445555665 667665543 4444332 333344443332 1 11111111235666677787775432222 2
Q ss_pred hHhHHhhcCCCceeehhHH-HHHhhhhHHHHHH
Q 007665 140 SLVTCVKNFPESRGMMLGL-MKGFVGLSGAVFT 171 (594)
Q Consensus 140 ~~~~i~~~fp~~rg~~~gi-~~~~~glg~~i~~ 171 (594)
....+...++++..+-.|+ .+..+|+|-.+..
T Consensus 224 ViL~lPhEyK~~~pk~ig~~Fg~iWGfGY~~yT 256 (267)
T PF07672_consen 224 VILNLPHEYKGYNPKKIGIQFGLIWGFGYIFYT 256 (267)
T ss_pred HHhcChhhhcCCCcceehhHHHHHHHHHHHHHH
Confidence 2233344443322233343 4556777766654
No 297
>PF10225 DUF2215: Uncharacterized conserved protein (DUF2215); InterPro: IPR024233 This entry represents a domain that is found in a number of different proteins, including a family of transmembrane proteins.
Probab=59.39 E-value=1.7e+02 Score=28.11 Aligned_cols=55 Identities=13% Similarity=0.025 Sum_probs=30.5
Q ss_pred hhHHHHHHHHHHHhhhhhhhhhhhHhHHhhcCCCceeehhHHHHHhhhhHHHHHHHHH
Q 007665 117 PKVWQMCLYICIGANSQNFANTGSLVTCVKNFPESRGMMLGLMKGFVGLSGAVFTQIY 174 (594)
Q Consensus 117 ~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp~~rg~~~gi~~~~~glg~~i~~~l~ 174 (594)
.|..+.+......|+-... ........+..| +|.....++.+++++|..+...+.
T Consensus 32 ~s~~FyY~sg~~lGv~~s~--li~~~~~~k~lP-rk~~~~~~l~gg~~~~~y~l~~~~ 86 (249)
T PF10225_consen 32 RSVLFYYSSGISLGVLASL--LILLFQLSKLLP-RKSMFYAVLYGGWSFGLYFLQQLW 86 (249)
T ss_pred cChhHHHhhhHHHHHHHHH--HHHHHHHHHHcc-CcchhHHHHhhhhHHHHHHHHHHH
Confidence 5656666666555553332 233345678889 555555555555566665554443
No 298
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=57.04 E-value=61 Score=35.07 Aligned_cols=70 Identities=16% Similarity=0.210 Sum_probs=40.3
Q ss_pred HHhhchHHHHHHHHHHHhhccccceeeccHHHHHHhcC-CCCCcchhhHHHHhhhhhHhhhhhccccHHHhh
Q 007665 346 LQALLSIDMLILFLATFCGLGCSLTAIDNLGQIGESLG-YPQHTINTFVSLVSIWNYFGRVFAGFVSEIILL 416 (594)
Q Consensus 346 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~s~~~a~~~~~~~~i~~~~g~~~~g~l~dr~g~ 416 (594)
.+.+|.|.- ...++.+++.+....++.....++...| +++..-+.+++..-+.-+++.+++|+.+-|+-+
T Consensus 252 gDVFR~P~~-~~lls~lvG~G~Qll~~~~~~~~~a~~g~~~~~~rg~l~t~~i~~y~~~~~iaGy~S~~~yk 322 (521)
T PF02990_consen 252 GDVFRPPKH-PMLLSALVGTGIQLLFMALVTLFFAALGFLSPNNRGSLLTAAIILYALTSFIAGYVSARLYK 322 (521)
T ss_pred HHHhcCcCC-chHHHhHhcchhhhhHHHHHHHHHHHhhhccccCcchHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 466776663 4444455555544444444444455555 455555666666666666677777777777644
No 299
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=55.04 E-value=32 Score=30.06 Aligned_cols=32 Identities=16% Similarity=0.247 Sum_probs=24.3
Q ss_pred HHHHHHHHHHhccCCccccccchhhccchhhh
Q 007665 463 LTLLFIIISELFGLKYYSTLFNCGQLASPLGS 494 (594)
Q Consensus 463 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~ 494 (594)
.++.+.+++..+++++-|...|.-..-.+++-
T Consensus 112 lGisYGilSaSWD~~r~GSllG~~e~~~N~~r 143 (153)
T PF11947_consen 112 LGISYGILSASWDPEREGSLLGWEEFKRNWGR 143 (153)
T ss_pred HhhhhhhcccccCCCCCCCcccHHHHHHhHHH
Confidence 45667777888998999999888766666554
No 300
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=54.86 E-value=36 Score=33.93 Aligned_cols=88 Identities=8% Similarity=-0.051 Sum_probs=52.9
Q ss_pred HHHHhCCCHhHHHHHHHHHhhhhhhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHh
Q 007665 51 IKSTLGYDQTTLNLLSTCKDLGANVGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIAKPKVWQMCLYICIGA 130 (594)
Q Consensus 51 l~~~~~~s~~~~~~~~~~~~~~~~~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~~~~~~l~~~r~l~G 130 (594)
++...+.+..+.++.. .+..-.....+.+.+.+++|.|.++.++......- .....- +.+..++-..++.|
T Consensus 51 lq~~vn~~lg~~sl~~-~y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~ly-------iA~Nl~-pr~~tlVPa~~~~G 121 (390)
T KOG3097|consen 51 LQTSVNYDLGTVSLGA-LYLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALY-------IAANLE-PRYETLVPAGLVLG 121 (390)
T ss_pred HHHHHhcCcccchhhh-hhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH-------HHhhcc-hhHHhhccHHHhhc
Confidence 4444444444444322 22222233455558999999999998855543332 111111 56788888999999
Q ss_pred hhhhhhhhhhHhHHhhc
Q 007665 131 NSQNFANTGSLVTCVKN 147 (594)
Q Consensus 131 ~g~g~~~~~~~~~i~~~ 147 (594)
+|.+..+.+--+++++.
T Consensus 122 ~aa~p~W~SkgtYlT~~ 138 (390)
T KOG3097|consen 122 MAAGPIWASKGTYLTPM 138 (390)
T ss_pred cccccccccCcceecHH
Confidence 99998876665655443
No 301
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=51.75 E-value=3.3e+02 Score=29.06 Aligned_cols=84 Identities=13% Similarity=0.119 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHHhhhhhhchhhhHHHHHHHhCCC---HhHHHHHHHHHhh-hh-hhhhhhhhhhcccCchHHHHHHHHHH
Q 007665 25 WFMMFASFLIMAGAGATYLFGTYSKEIKSTLGYD---QTTLNLLSTCKDL-GA-NVGVLSGLLAEVTPPWLVLLVGSAMN 99 (594)
Q Consensus 25 w~~~~~~~l~~~~~g~~~~~~~~~~~l~~~~~~s---~~~~~~~~~~~~~-~~-~~~~~~G~l~Dr~G~r~v~~~g~~l~ 99 (594)
|.-++...+.++|.+..|.+ ...++|.+..+ ++.++++=+...+ .+ ++.++.+++.+++.+++++-.-+..+
T Consensus 26 ~~kflpl~Ll~f~I~~ny~~---lR~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F 102 (509)
T COG3202 26 LKKFLPLALLFFCILFNYNL---LRSLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFF 102 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHH---HHHhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHH
Confidence 33334334444444444333 56778887765 4456665444443 33 56889999999999999998888888
Q ss_pred HHHHHHHHHHHh
Q 007665 100 FGGYFMIWLAVM 111 (594)
Q Consensus 100 ~ig~~l~~~a~~ 111 (594)
....+++++.+-
T Consensus 103 ~~fF~LFa~Vi~ 114 (509)
T COG3202 103 LGFFALFAFVIY 114 (509)
T ss_pred HHHHHHHHHHHh
Confidence 888888776654
No 302
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=51.28 E-value=1e+02 Score=32.40 Aligned_cols=55 Identities=13% Similarity=0.025 Sum_probs=40.8
Q ss_pred hHHHHHHHHHHHhhhhhhhhhhhHhHHhhcCC-CceeehhHHHHHhhhhHHHHHHH
Q 007665 118 KVWQMCLYICIGANSQNFANTGSLVTCVKNFP-ESRGMMLGLMKGFVGLSGAVFTQ 172 (594)
Q Consensus 118 ~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp-~~rg~~~gi~~~~~glg~~i~~~ 172 (594)
+-+..++.-++.|+..|.....++.+..+..+ ++|..+-.++..+..+|-.+|+.
T Consensus 371 ~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~ 426 (437)
T TIGR00939 371 GDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAV 426 (437)
T ss_pred ccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555667899999999998888888888875 56777777776666666666553
No 303
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=47.03 E-value=12 Score=30.02 Aligned_cols=31 Identities=10% Similarity=0.023 Sum_probs=21.3
Q ss_pred ccccccchhhccchhhhhhhhhhHHHhhhhHH
Q 007665 478 YYSTLFNCGQLASPLGSYVLNVIVVGRLYDRE 509 (594)
Q Consensus 478 ~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~~~ 509 (594)
.++.+.++-...-.+++.++| ...|++.|+.
T Consensus 39 ~k~~~~a~klssefIsGilVG-a~iG~llD~~ 69 (116)
T COG5336 39 IKGYAQAFKLSSEFISGILVG-AGIGWLLDKF 69 (116)
T ss_pred hhhhhhhHHHHHHHHHHHHHH-HHHHHHHHHh
Confidence 455555665566677777655 4889999985
No 304
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=43.92 E-value=66 Score=32.49 Aligned_cols=88 Identities=17% Similarity=0.204 Sum_probs=59.7
Q ss_pred HHHhhhhhhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHhhhhhhhhhhhHhHHhh
Q 007665 67 TCKDLGANVGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIAKPKVWQMCLYICIGANSQNFANTGSLVTCVK 146 (594)
Q Consensus 67 ~~~~~~~~~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~ 146 (594)
....+|++..+..|.+--.+.|+.-++++..-...+.++...+ .+++++...+..++....-.+..+.+...+++
T Consensus 279 v~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~-----~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~ 353 (433)
T KOG3810|consen 279 VSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMA-----QTQHIWVCYAGYVLFRVIYQLTITIATFQIAR 353 (433)
T ss_pred HHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhh-----cccceehhhhhHHHHHhhHhhhhhHHHHHHHH
Confidence 4445677788899999888888765555555444444444333 12567777777777776666777777777777
Q ss_pred cCC-CceeehhHHH
Q 007665 147 NFP-ESRGMMLGLM 159 (594)
Q Consensus 147 ~fp-~~rg~~~gi~ 159 (594)
... +.-|...|+-
T Consensus 354 nL~~e~~gLvFGiN 367 (433)
T KOG3810|consen 354 NLSSELFGLVFGIN 367 (433)
T ss_pred hhhhhhheeeeehH
Confidence 776 4578888873
No 305
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=41.24 E-value=3.4e+02 Score=26.19 Aligned_cols=18 Identities=6% Similarity=-0.348 Sum_probs=9.3
Q ss_pred cccceeeccHHHHHHhcC
Q 007665 366 GCSLTAIDNLGQIGESLG 383 (594)
Q Consensus 366 ~~~~~~~~~~~~~~~~~g 383 (594)
+..+.....-..|.++..
T Consensus 192 GvlyGs~fvPv~Yi~~~~ 209 (254)
T PF07857_consen 192 GVLYGSNFVPVIYIQDHP 209 (254)
T ss_pred HHHHhcccchHHHHHhCc
Confidence 344444444555666653
No 306
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=40.75 E-value=65 Score=30.20 Aligned_cols=90 Identities=8% Similarity=-0.054 Sum_probs=54.0
Q ss_pred hhhhhhhcccCchH--------HHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHhhhhhhhhhhhHhHHhhcC
Q 007665 77 VLSGLLAEVTPPWL--------VLLVGSAMNFGGYFMIWLAVMKKIAKPKVWQMCLYICIGANSQNFANTGSLVTCVKNF 148 (594)
Q Consensus 77 ~~~G~l~Dr~G~r~--------v~~~g~~l~~ig~~l~~~a~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~f 148 (594)
+=.+.+.||||.+- ++++|.++-++...+.+-.+.....-|. ...-.-.|+|+|....++...+.+.+
T Consensus 125 p~laiI~ekYGldSpEgrGVl~~Yi~GTvfGtiffsllas~~a~~~~fhP----~ALAMasGvGSgSMMaAa~~aL~~~~ 200 (241)
T PF11299_consen 125 PNLAIISEKYGLDSPEGRGVLGVYIIGTVFGTIFFSLLASLLASLGIFHP----YALAMASGVGSGSMMAAASGALAAAY 200 (241)
T ss_pred cceeeeehhcCCCCccccceEEEeeehhhHHHHHHHHHHHHHHhccCCCH----HHHHHHcCCcHHHHHHHHHHHHHHHC
Confidence 45678899998653 4555555544443333221111110011 23344578999999999999999999
Q ss_pred CCceeehhHHHHHhhhhHHHHH
Q 007665 149 PESRGMMLGLMKGFVGLSGAVF 170 (594)
Q Consensus 149 p~~rg~~~gi~~~~~glg~~i~ 170 (594)
|+......++..+..-+.+..+
T Consensus 201 P~~a~~i~A~AaaSNllt~~~G 222 (241)
T PF11299_consen 201 PEMADQILAFAAASNLLTSVTG 222 (241)
T ss_pred cchHHHHHHHHHHHHHHHHHHH
Confidence 9877777777655554444444
No 307
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=33.29 E-value=1e+02 Score=33.00 Aligned_cols=42 Identities=10% Similarity=0.112 Sum_probs=34.2
Q ss_pred HHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhh
Q 007665 465 LLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYD 507 (594)
Q Consensus 465 ~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~ 507 (594)
+....+.|.+..++..+-+++...+.++|..+ +..+...+.+
T Consensus 164 LFW~fAN~itt~~eAKRfYpl~g~ganigli~-sG~~~~~~~~ 205 (491)
T PF03219_consen 164 LFWGFANEITTVEEAKRFYPLFGLGANIGLIF-SGQLTSYFSS 205 (491)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 56788899999999999999999999999865 5556555554
No 308
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=32.58 E-value=93 Score=27.25 Aligned_cols=46 Identities=15% Similarity=-0.083 Sum_probs=26.5
Q ss_pred hhHHHHHHHHHHHhhhhhhhhhhhHhHHh-hcCCCceeehhHHHHHhhhh
Q 007665 117 PKVWQMCLYICIGANSQNFANTGSLVTCV-KNFPESRGMMLGLMKGFVGL 165 (594)
Q Consensus 117 ~~~~~l~~~r~l~G~g~g~~~~~~~~~i~-~~fp~~rg~~~gi~~~~~gl 165 (594)
+++..+++.-++.|+|.-+ .++-+++ .|=|++.|-.+|+-..--.+
T Consensus 95 P~~~~~~~S~~~Fg~gllG---isYGilSaSWD~~r~GSllG~~e~~~N~ 141 (153)
T PF11947_consen 95 PPWAVLLVSLVFFGLGLLG---ISYGILSASWDPEREGSLLGWEEFKRNW 141 (153)
T ss_pred CchHHHHHHHHHHHHHHHh---hhhhhcccccCCCCCCCcccHHHHHHhH
Confidence 4555666666666655443 2333333 56677789888875554433
No 309
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=31.28 E-value=5.8e+02 Score=26.05 Aligned_cols=248 Identities=9% Similarity=-0.011 Sum_probs=0.0
Q ss_pred hhhhhhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHhhhhhhhhhhhHhHHhhcCC
Q 007665 70 DLGANVGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIAKPKVWQMCLYICIGANSQNFANTGSLVTCVKNFP 149 (594)
Q Consensus 70 ~~~~~~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~fp 149 (594)
.+....|.+.++. ..+.+...-.++-+.+-+..-..-+.--.......-..-+..-.+..+..-...........+.+.
T Consensus 10 ~~ii~~G~~~~~~-~~l~~~~~~~ls~lv~~~~lP~liF~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (385)
T PF03547_consen 10 FLIILLGYLLGRF-GILDPEASKGLSKLVFNVFLPALIFSSIANTDTLEDLLSLWFIPVFAFIIFILGLLLGFLLSRLFR 88 (385)
T ss_pred HHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcC
Q ss_pred -CceeehhHHHHHhhhhHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCchhHHHHHHHHHHHH
Q 007665 150 -ESRGMMLGLMKGFVGLSGAVFTQIYLAIYGNDAKSMILLIAWLPALVSLVFVYTIRPLKVSSHPNELKVFYEYLYITIS 228 (594)
Q Consensus 150 -~~rg~~~gi~~~~~glg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~ 228 (594)
+++-+..-...++++=.+.++-++...+.++....+..+..+...+........+-.....+....+..-.
T Consensus 89 ~~~~~~~~~~~~~~~~N~~~lglpi~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~~~~~~~~~~-------- 160 (385)
T PF03547_consen 89 LPKEWRGVFVLAASFGNTGFLGLPILQALFGERGVAYAIIFDVVNNIILWSLGYFLLESRSEKEDKSEEEPS-------- 160 (385)
T ss_pred CCcccceEEEecccCCcchhhHHHHHHHHhcchhhhhehHHHHhhHHHHHHHHHHhhccccccccccccccc--------
Q ss_pred HHHHHHHHhhhhcccCCCCccccchhhHHHHhhhhcchhhhhhhhhhhhcCCCCCCCcccccccccchhhhhhhhhhhcc
Q 007665 229 LALCLMGLTIAQKQAHFPHVGYIGSAIAVCIFVFLPLFIAFREEFAAWQQRKQPTPASAVVIVFEQTTLVATKSEILEIE 308 (594)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (594)
.-.+..+...++++...+.+.....++..+++++......+
T Consensus 161 ---------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (385)
T PF03547_consen 161 ---------------------------------------SAESIDSEQEDSDEMSLDGSSPSSTEEEIDEDGSPSSTPSQ 201 (385)
T ss_pred ---------------------------------------ccccccccccCCccccCCcccccccccccccCCcccccccc
Q ss_pred cccccccccccCCCCCCCCCcCCCCCCCCCCCCCccHHHhhchHHHHHHHHHHHhhc
Q 007665 309 SDHSQTLQTENKKQEPDQTPCCGNIFKPPKRGEDYGILQALLSIDMLILFLATFCGL 365 (594)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 365 (594)
.+.+.+...+...++.+......+..+..........++.+++|..+...++..+..
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nP~~~a~~lgli~~~ 258 (385)
T PF03547_consen 202 SSASAPSSVSTSPSPSNSTGAEQKSSNSTRKKLKKSILKLFKNPPLIAIILGLIIGL 258 (385)
T ss_pred cccccchhhccCCcccccchhhhhhhhhHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
No 310
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=29.41 E-value=7.3e+02 Score=26.56 Aligned_cols=42 Identities=12% Similarity=0.135 Sum_probs=33.4
Q ss_pred HHHHHHHHhccCCccccccchhhccchhhhhhhhhhHHHhhhh
Q 007665 465 LLFIIISELFGLKYYSTLFNCGQLASPLGSYVLNVIVVGRLYD 507 (594)
Q Consensus 465 ~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~~~g~l~~ 507 (594)
+....+.|....++..+-+++.++..+++..+ +..+..++..
T Consensus 168 lFw~faNeitt~~eakRFy~lf~l~~ni~lll-sg~~~~~~~k 209 (509)
T COG3202 168 LFWQFANEITTIEEAKRFYPLFGLGANISLLL-SGEVTSWLSK 209 (509)
T ss_pred HHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHH-HHHHHHHHhh
Confidence 55677889999999999999999999999876 5556666544
No 311
>COG3256 NorB Nitric oxide reductase large subunit [Inorganic ion transport and metabolism]
Probab=28.62 E-value=8.1e+02 Score=26.84 Aligned_cols=36 Identities=22% Similarity=0.356 Sum_probs=23.2
Q ss_pred cccCCCCcccc-chhhHHHHhhhhcchhhhhhhhhhh
Q 007665 241 KQAHFPHVGYI-GSAIAVCIFVFLPLFIAFREEFAAW 276 (594)
Q Consensus 241 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (594)
.++....+.+| ..+++.+.+..+|+.....+.-..|
T Consensus 506 HyYf~G~P~~wm~iGAvfSaLEVvPl~~l~~~af~~~ 542 (717)
T COG3256 506 HYYFIGTPGYWMWIGAVFSALEVVPLFLLGLEAFELW 542 (717)
T ss_pred eeeecCCchHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 34445555554 4777788888889877766554333
No 312
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=28.36 E-value=1.9e+02 Score=28.92 Aligned_cols=57 Identities=11% Similarity=0.135 Sum_probs=44.2
Q ss_pred hhHHHHHHHHHHHhhhhhhhhhhhHhHHhhcC-CCceeehhHHHHHhhhhHHHHHHHH
Q 007665 117 PKVWQMCLYICIGANSQNFANTGSLVTCVKNF-PESRGMMLGLMKGFVGLSGAVFTQI 173 (594)
Q Consensus 117 ~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~f-p~~rg~~~gi~~~~~glg~~i~~~l 173 (594)
++++..++.-+.-|+=.|..|.....-+.+.- |++|-.+++.+..+-++|..+.+.+
T Consensus 340 psi~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~l 397 (409)
T KOG3880|consen 340 PSIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLL 397 (409)
T ss_pred cHHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHH
Confidence 67777777778888877888888887777644 7889999999888877776665533
No 313
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=26.20 E-value=2.7e+02 Score=22.48 Aligned_cols=29 Identities=14% Similarity=0.176 Sum_probs=16.3
Q ss_pred hhhhhhhhhhhhhcc-cCchHHHHHHHHHH
Q 007665 71 LGANVGVLSGLLAEV-TPPWLVLLVGSAMN 99 (594)
Q Consensus 71 ~~~~~~~~~G~l~Dr-~G~r~v~~~g~~l~ 99 (594)
+..+.+...|...|+ ||.++.+.+..++.
T Consensus 54 ~pil~G~~lG~WLD~~~~t~~~~tl~~lll 83 (100)
T TIGR02230 54 IPTLLGVAVGIWLDRHYPSPFSWTLTMLIV 83 (100)
T ss_pred HHHHHHHHHHHHHHhhcCCCcHHHHHHHHH
Confidence 334456666766665 56666555544443
No 314
>COG4769 Predicted membrane protein [Function unknown]
Probab=25.21 E-value=1.3e+02 Score=26.54 Aligned_cols=51 Identities=16% Similarity=0.087 Sum_probs=33.7
Q ss_pred hhhhhhhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHhhhhh
Q 007665 71 LGANVGVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIWLAVMKKIAKPKVWQMCLYICIGANSQN 134 (594)
Q Consensus 71 ~~~~~~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~~a~~~~~~~~~~~~l~~~r~l~G~g~g 134 (594)
.|++.+.+.=++..++|+|.+-++|.-. +| +++ +|+.++.+.+++.+--.-
T Consensus 85 aG~i~S~L~m~~l~~f~~k~~S~lgiS~--mG----aF~-------hNl~QLivas~Lv~~~~v 135 (181)
T COG4769 85 AGAILSTLFMYFLYQFGPKYLSLLGISV--MG----AFT-------HNLGQLIVASFLVFTTSV 135 (181)
T ss_pred HHHHHHHHHHHHHHHcCCceEeeeehhh--HH----HHH-------HhHHHHHHHHHHHhcchH
Confidence 3444455555778899999986555433 33 122 799999999999884433
No 315
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=24.40 E-value=72 Score=31.92 Aligned_cols=69 Identities=13% Similarity=0.059 Sum_probs=36.9
Q ss_pred HHhhhhhHhhhhhccccHHHhhhccCCchHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHhhhhHHHHHHH
Q 007665 395 LVSIWNYFGRVFAGFVSEIILLKYKVPRPLIMAISLILSAVGDVLIAFPKPGSVYVASLLVGFSYGAQLTLLFII 469 (594)
Q Consensus 395 ~~~i~~~~g~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~ 469 (594)
......+...++.+.+..++|-| +.+.++..........-..+....++....+.|++.+..+..--++
T Consensus 66 ~~y~~l~~s~m~~~~~Ir~~g~K------~tm~lav~~Y~lyiA~Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtY 134 (390)
T KOG3097|consen 66 ALYLSLIDSSMFMPLLIRFLGTK------WTMVLAVFPYALYIAANLEPRYETLVPAGLVLGMAAGPIWASKGTY 134 (390)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhH------HHHHHHHHHHHHHHHhhcchhHHhhccHHHhhccccccccccCcce
Confidence 34444555566666788888877 5554433322222111112222345556778888888776544333
No 316
>COG2056 Predicted permease [General function prediction only]
Probab=22.52 E-value=1.7e+02 Score=29.58 Aligned_cols=31 Identities=19% Similarity=0.184 Sum_probs=22.8
Q ss_pred chHHHHHHHHHHHHHHHHHHHHH-Hhhhhhcc
Q 007665 534 CYRLSFTILAGVNIFGALITFIL-VMRTRRYY 564 (594)
Q Consensus 534 ~~~~~f~~~~~~~~~~~~~~~~~-~~~~~~~~ 564 (594)
....++++.+...+++++++.++ ++|.|.+.
T Consensus 189 ~V~~am~ip~lgMi~GLl~ai~~~YrKpReY~ 220 (444)
T COG2056 189 QVPKAMWIPGLGMIVGLLLAIFVSYRKPREYQ 220 (444)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhcCCcccc
Confidence 36677888888899999988888 44444443
No 317
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=22.15 E-value=4.2e+02 Score=25.75 Aligned_cols=12 Identities=33% Similarity=0.324 Sum_probs=4.7
Q ss_pred HHHHhhhhHHHH
Q 007665 455 VGFSYGAQLTLL 466 (594)
Q Consensus 455 ~G~~~g~~~~~~ 466 (594)
.++..|..+..-
T Consensus 47 ~~~lsG~~W~iG 58 (269)
T PF06800_consen 47 VAFLSGAFWAIG 58 (269)
T ss_pred HHHHHHHHHHHH
Confidence 333334444433
No 318
>PRK10692 hypothetical protein; Provisional
Probab=21.55 E-value=3e+02 Score=21.35 Aligned_cols=17 Identities=18% Similarity=0.036 Sum_probs=9.5
Q ss_pred chHHHHHHHHHHHHHHH
Q 007665 88 PWLVLLVGSAMNFGGYF 104 (594)
Q Consensus 88 ~r~v~~~g~~l~~ig~~ 104 (594)
||...++|-+++.+|.+
T Consensus 3 Rk~a~~~GN~lMglGmv 19 (92)
T PRK10692 3 RKNASLLGNVLMGLGLV 19 (92)
T ss_pred chhhHHHhhHHHHHHHH
Confidence 45555666666555533
No 319
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=21.37 E-value=6.3e+02 Score=26.15 Aligned_cols=12 Identities=17% Similarity=0.318 Sum_probs=8.6
Q ss_pred hhhhHHHhhhhH
Q 007665 497 LNVIVVGRLYDR 508 (594)
Q Consensus 497 ~gp~~~g~l~~~ 508 (594)
++|.+.|.+...
T Consensus 190 Lapv~tg~Iitf 201 (503)
T KOG2601|consen 190 LAPVITGLIITF 201 (503)
T ss_pred hhhhhhccccee
Confidence 378788877765
No 320
>PF12670 DUF3792: Protein of unknown function (DUF3792); InterPro: IPR023804 Members of this family of strongly hydrophobic putative transmembrane protein average about 125 amino acids in length and occur mostly, but not exclusively, in the Firmicutes. Members are quite diverse in sequence. Their function is unknown.
Probab=20.81 E-value=4.8e+02 Score=21.50 Aligned_cols=57 Identities=16% Similarity=0.049 Sum_probs=29.9
Q ss_pred HHHHhCCCHhHHHH-HHHHHhhhhhh-hhhhhhhhcccCchHHHHHHHHHHHHHHHHHH
Q 007665 51 IKSTLGYDQTTLNL-LSTCKDLGANV-GVLSGLLAEVTPPWLVLLVGSAMNFGGYFMIW 107 (594)
Q Consensus 51 l~~~~~~s~~~~~~-~~~~~~~~~~~-~~~~G~l~Dr~G~r~v~~~g~~l~~ig~~l~~ 107 (594)
+....++++....+ +...+.++.+. +...|+-.++-|--.-+..|.+.+.+-.++..
T Consensus 28 ll~~~~~~e~~~~~~~~~i~~ls~~~GG~~a~~~~~~kG~l~G~~~Gl~y~~il~lis~ 86 (116)
T PF12670_consen 28 LLYFTSLSESILPWLVVIIYILSVFIGGFYAGRKAGSKGWLHGLLVGLLYFLILLLISF 86 (116)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHH
Confidence 34445577788777 34444444433 55555555544444445555555555544443
Done!