Query         007667
Match_columns 594
No_of_seqs    92 out of 94
Neff          4.3 
Searched_HMMs 29240
Date          Mon Mar 25 07:30:27 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007667.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007667hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 2vgl_B AP-2 complex subunit be  39.1      56  0.0019   35.1   7.4  130  212-360   362-492 (591)
  2 4ffb_C Protein STU2; tubulin f  34.8 2.6E+02   0.009   26.6  10.7   68  431-500   180-247 (278)
  3 4fdd_A Transportin-1; heat rep  23.7 3.1E+02   0.011   30.3  10.2   46  274-319   648-697 (852)
  4 1eyh_A Epsin; superhelix of he  21.7 1.5E+02   0.005   27.2   5.9   35  451-493    39-73  (144)
  5 2of3_A ZYG-9; multifunctional   20.0   1E+02  0.0034   31.0   4.8  101  334-467   132-240 (266)
  6 1w63_A Adapter-related protein  19.4      98  0.0033   33.6   4.9   92  214-320   396-489 (618)
  7 1xgw_A Epsin 4; ENTH, enthopro  16.9 1.1E+02  0.0039   29.0   4.1   62  451-519    68-130 (176)
  8 3fga_B Serine/threonine-protei  14.2 4.8E+02   0.016   27.8   8.5  165  326-498   209-401 (403)
  9 3aa0_C 21MER peptide from leuc  14.2      47  0.0016   22.3   0.5   14   33-46      9-22  (26)
 10 1inz_A EPS15-interacting porte  13.8 1.9E+02  0.0063   26.7   4.6   64  451-522    57-121 (148)

No 1  
>2vgl_B AP-2 complex subunit beta-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Homo sapiens} SCOP: i.23.1.1 PDB: 2jkt_B 2jkr_B* 2xa7_B 1w63_B
Probab=39.13  E-value=56  Score=35.12  Aligned_cols=130  Identities=15%  Similarity=0.269  Sum_probs=70.9

Q ss_pred             CCCCChHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHhhhhcCCCcccchhhhhcccccchHHHHHHHHHHhhcChhHHH
Q 007667          212 LSQIPDVVYKTSIDWINQRSPEVLGSFVLWCLDSILADVETHNVSSKASKKVVQQASSKSQVAIFVALAMVLRRKPDVLI  291 (594)
Q Consensus       212 Ls~ip~~v~ktsidwi~q~~~~~L~~Fv~~~L~~mltdL~~~qg~~k~~~~~~q~~~~~s~vG~~V~LQmIlr~kP~il~  291 (594)
                      +...+..+++.++..|...... ......|+++.++.-+... |+     ...+        -.-++|.-|++..|+.-.
T Consensus       362 l~~~d~~~r~~~v~aI~~la~~-~~~~~~~~v~~Ll~ll~~~-~~-----~v~~--------e~i~~l~~ii~~~p~~~~  426 (591)
T 2vgl_B          362 ATEVDVDFVRKAVRAIGRCAIK-VEQSAERCVSTLLDLIQTK-VN-----YVVQ--------EAIVVIRDIFRKYPNKYE  426 (591)
T ss_dssp             TTSSCHHHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHHHTC-CH-----HHHH--------HHHHHHHHHHHHSCSSCC
T ss_pred             HhcCCHHHHHHHHHHHHHHHHh-ChhHHHHHHHHHHHHHccc-ch-----HHHH--------HHHHHHHHHHHHCcchHH
Confidence            4455677777777777654443 2345789999888777643 21     1111        112356667788997655


Q ss_pred             hhHHHHHHhhh-hhCCCchhHHHHHhhhhcccchhhHHHHHHHhhhhcccCCCCCcchHHHHHHHHHHHh
Q 007667          292 GVLPALRENAK-YQGQDKLPVIVWMIAQASQGELAVGLYSWAHNLLPIVGGKNCNPQSRDIILQLVERIL  360 (594)
Q Consensus       292 ~~L~kl~~ns~-~nr~~k~lsilWaigQAg~~DL~vGL~vW~~iLLPvL~~Ks~sp~srdlilqylErIL  360 (594)
                      ..++.+.+.-. -..|...-.++|++||=|..-...  .--...++..+  ...++.+|-.+++-+-++.
T Consensus       427 ~~v~~L~~~l~~~~~~~~~~~~~wilGey~~~~~~~--~~~l~~l~~~~--~~~~~~vr~~~l~a~~Kl~  492 (591)
T 2vgl_B          427 SIIATLCENLDSLDEPDARAAMIWIVGEYAERIDNA--DELLESFLEGF--HDESTQVQLTLLTAIVKLF  492 (591)
T ss_dssp             TTHHHHHHTTTTCCSHHHHHHHHHHHHTTCTTCTTH--HHHHHHHSTTC--SSSCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhccCHHHHHHHHHHHHcccccccCH--HHHHHHHHHhh--ccCCHHHHHHHHHHHHHHH
Confidence            55555554321 223445678899999966543221  11112222111  1235666656666666665


No 2  
>4ffb_C Protein STU2; tubulin fold, heat repeats, cytoskeleton, microtubule, tubul domain, hydrolase; HET: GTP; 2.88A {Saccharomyces cerevisiae}
Probab=34.76  E-value=2.6e+02  Score=26.56  Aligned_cols=68  Identities=9%  Similarity=0.168  Sum_probs=40.9

Q ss_pred             HHHHHHHHHHHHhccCChhhHHHHHHHHHHhhccCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhhc
Q 007667          431 VSLQILSFAIKFAGESTPDLSNEAAGIFIWCLTQSADCYKHWDKLYEANLEGSVKVLKKLSEEWKEHSAK  500 (594)
Q Consensus       431 v~qqiF~~~L~~a~~~~~~l~kE~~~~lI~CLt~d~dC~k~Wr~lY~knl~qS~~LL~~L~~~W~~~s~K  500 (594)
                      ....+++.+.+..+..+++.|++++..++.+-..-......=...|.++++.  .+++.|..+|..+..+
T Consensus       180 ~l~~i~~~l~k~l~d~~~~VR~aA~~l~~~ly~~~G~~~~~~~~~~l~~lkp--~~~k~le~~f~k~~~~  247 (278)
T 4ffb_C          180 FLPELLKHVPQLAGHGDRNVRSQTMNLIVEIYKVTGNNSDLLEEILFKKLKP--IQVKDLHKLFAKVGDE  247 (278)
T ss_dssp             HHHHHGGGHHHHHTCSSHHHHHHHHHHHHHHHTC-----------CTTSSCH--HHHHHHHHHHSCCCC-
T ss_pred             HHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHhCcchhhhhhhhhhcCCH--HHHHHHHHHHHhcCCC
Confidence            3446777777788899999999998888776543322211111234455554  4678888888776554


No 3  
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*
Probab=23.72  E-value=3.1e+02  Score=30.31  Aligned_cols=46  Identities=13%  Similarity=0.093  Sum_probs=21.6

Q ss_pred             HHHHHHHHHhhcChhHHHhhHHH----HHHhhhhhCCCchhHHHHHhhhh
Q 007667          274 AIFVALAMVLRRKPDVLIGVLPA----LRENAKYQGQDKLPVIVWMIAQA  319 (594)
Q Consensus       274 G~~V~LQmIlr~kP~il~~~L~k----l~~ns~~nr~~k~lsilWaigQA  319 (594)
                      ..+-+|..+.+.-|.-+...++.    +.+.-....+..+-..+|++|.-
T Consensus       648 ~a~~~l~~l~~~~~~~~~~~l~~~lp~l~~~l~~~~~~v~~~a~~alg~i  697 (852)
T 4fdd_A          648 SSFALLGDLTKACFQHVKPCIADFMPILGTNLNPEFISVCNNATWAIGEI  697 (852)
T ss_dssp             HHHHHHHHHHHHCGGGTGGGHHHHHHHHHHTCCTTSHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCccchHHHHHHHHHHHHH
Confidence            34445555555555433333333    22322222334455667777764


No 4  
>1eyh_A Epsin; superhelix of helices, cell cycle; 1.56A {Rattus norvegicus} SCOP: a.118.9.1 PDB: 1h0a_A* 1edu_A
Probab=21.68  E-value=1.5e+02  Score=27.19  Aligned_cols=35  Identities=17%  Similarity=0.399  Sum_probs=27.8

Q ss_pred             HHHHHHHHHHhhccCchHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 007667          451 SNEAAGIFIWCLTQSADCYKHWDKLYEANLEGSVKVLKKLSEE  493 (594)
Q Consensus       451 ~kE~~~~lI~CLt~d~dC~k~Wr~lY~knl~qS~~LL~~L~~~  493 (594)
                      -.|+.+++--+|..+.   +.||..|+     |+.||.||+.+
T Consensus        39 ~~~Im~~l~kRL~d~~---k~Wr~vyK-----aL~lleyLl~n   73 (144)
T 1eyh_A           39 FSEIMSMIWKRLNDHG---KNWRHVYK-----AMTLMEYLIKT   73 (144)
T ss_dssp             HHHHHHHHHHHHSCCG---GGHHHHHH-----HHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHccCC---cchHHHhH-----HHHHHHHHHHh
Confidence            4677788888887644   68999998     58899999877


No 5  
>2of3_A ZYG-9; multifunctional macromolecule, kinetochore, microtubule, XMAP215, STU2, DIS1, microtubule associated protein, structural protein; 1.90A {Caenorhabditis elegans}
Probab=20.00  E-value=1e+02  Score=30.97  Aligned_cols=101  Identities=20%  Similarity=0.320  Sum_probs=63.3

Q ss_pred             hhhhcccCCCC--CcchHHHHHHHHHHHhcCccchhhhcccccccCCcccCchhHH-HHHHhhCCCCchhhh--HHHHHH
Q 007667          334 NLLPIVGGKNC--NPQSRDIILQLVERILSSPKARTILVNGAVRKGERLVPPSALE-TLLRLTFPTSSARVK--ATERFE  408 (594)
Q Consensus       334 iLLPvL~~Ks~--sp~srdlilqylErILs~~kar~il~n~av~kg~~lI~p~~f~-~ll~~tfP~~sarvk--aterfe  408 (594)
                      .++|.|--|..  ...+|+.+.+.+..+.                  ...||+.++ .++. .+-..|+|+.  ..+-+.
T Consensus       132 ~~lP~LveKlGd~k~~vR~~~r~il~~l~------------------~v~~~~~v~~~l~~-g~ksKN~R~R~e~l~~l~  192 (266)
T 2of3_A          132 AFVPYLLLKTGEAKDNMRTSVRDIVNVLS------------------DVVGPLKMTPMLLD-ALKSKNARQRSECLLVIE  192 (266)
T ss_dssp             HHHHHHHHGGGCSSHHHHHHHHHHHHHHH------------------HHHCHHHHHHHHHH-GGGCSCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCChHHHHHHHHHHHHHHH------------------HHCCHHHHHHHHHH-HHccCCHHHHHHHHHHHH
Confidence            46788766666  2456777777764444                  246777444 4555 5554556543  334444


Q ss_pred             HhccchhhhhhcCCCCchhHHHHHHHHH---HHHHHHhccCChhhHHHHHHHHHHhhccCch
Q 007667          409 AIYPTLKEVALAGVPGSKAMKQVSLQIL---SFAIKFAGESTPDLSNEAAGIFIWCLTQSAD  467 (594)
Q Consensus       409 aiYP~LKelAlag~p~S~a~Kqv~qqiF---~~~L~~a~~~~~~l~kE~~~~lI~CLt~d~d  467 (594)
                      .+.++      .|.+.+        +++   +...+..+..|...|+.++.++++|...-.+
T Consensus       193 ~li~~------~G~~~~--------~~l~~~~~ia~ll~D~d~~VR~aAl~~lve~y~~~Gd  240 (266)
T 2of3_A          193 YYITN------AGISPL--------KSLSVEKTVAPFVGDKDVNVRNAAINVLVACFKFEGD  240 (266)
T ss_dssp             HHHHH------HCSGGG--------GGGCHHHHHGGGGGCSSHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHh------cCCCcc--------ccccchHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhH
Confidence            44443      233322        356   8888888999999999999988877665443


No 6  
>1w63_A Adapter-related protein complex 1 gamma 1 subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1
Probab=19.35  E-value=98  Score=33.63  Aligned_cols=92  Identities=14%  Similarity=0.113  Sum_probs=51.2

Q ss_pred             CCChHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHhhhhcCCCcccchhhhhcccccchHHHHHHHHHHhhcChhHHHhh
Q 007667          214 QIPDVVYKTSIDWINQRSPEVLGSFVLWCLDSILADVETHNVSSKASKKVVQQASSKSQVAIFVALAMVLRRKPDVLIGV  293 (594)
Q Consensus       214 ~ip~~v~ktsidwi~q~~~~~L~~Fv~~~L~~mltdL~~~qg~~k~~~~~~q~~~~~s~vG~~V~LQmIlr~kP~il~~~  293 (594)
                      ..+.+++..++.+|.+.... ...-+.|+++.|+.-|... |.     ...      ..  .-.++.-+.+..|+.-...
T Consensus       396 ~~d~e~r~~~v~~I~~la~k-~~~~~~~~v~~ll~lL~~~-~~-----~v~------~~--~~~~l~~ii~~~p~l~~~~  460 (618)
T 1w63_A          396 SCEPEFKADCASGIFLAAEK-YAPSKRWHIDTIMRVLTTA-GS-----YVR------DD--AVPNLIQLITNSVEMHAYT  460 (618)
T ss_dssp             HCCHHHHHHHHHHHHHHHHS-SCCCHHHHHHHHHHHHHHT-GG-----GSC------SS--HHHHHHHHHHHSCSTHHHH
T ss_pred             hCCHHHHHHHHHHHHHHHHH-hCccHHHHHHHHHHHHHhc-cc-----hhH------HH--HHHHHHHHHhcChhHHHHH
Confidence            35677777778777666442 1123678888888666653 21     001      11  1233445667789875555


Q ss_pred             HHHHHHhhhh--hCCCchhHHHHHhhhhc
Q 007667          294 LPALRENAKY--QGQDKLPVIVWMIAQAS  320 (594)
Q Consensus       294 L~kl~~ns~~--nr~~k~lsilWaigQAg  320 (594)
                      +.++.+.-..  ......-.++|.+|+=|
T Consensus       461 v~~L~~~l~~~~~~~~~~~~~~wilGEy~  489 (618)
T 1w63_A          461 VQRLYKAILGDYSQQPLVQVAAWCIGEYG  489 (618)
T ss_dssp             HHHHHHHHHHCCSCSHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhcccccHHHHHHHHHHHhhhH
Confidence            5555442221  11223457899999854


No 7  
>1xgw_A Epsin 4; ENTH, enthoprotin, clathrin-associated, endocytosis; 1.90A {Homo sapiens} PDB: 2qy7_A 2v8s_E
Probab=16.93  E-value=1.1e+02  Score=29.03  Aligned_cols=62  Identities=16%  Similarity=0.196  Sum_probs=38.1

Q ss_pred             HHHHHHHHHHhhccCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhhc-cCCCchHHHHHHHHHhcCc
Q 007667          451 SNEAAGIFIWCLTQSADCYKHWDKLYEANLEGSVKVLKKLSEEWKEHSAK-LSPLDPFRATLKSFRQKNE  519 (594)
Q Consensus       451 ~kE~~~~lI~CLt~d~dC~k~Wr~lY~knl~qS~~LL~~L~~~W~~~s~K-L~~~~~L~~Tlksfr~~Ne  519 (594)
                      -.|+.+++..+|..+..  +.||..|+     |+.||.||+.+=.+.-.. +...-..-++|++|+...+
T Consensus        68 ~~~Im~~L~kRl~~~~~--k~WR~vyK-----aL~LLeYLl~nGse~vv~~~r~~i~~I~~L~~F~y~D~  130 (176)
T 1xgw_A           68 FPELMNMLWSRMLKDNK--KNWRRVYK-----SLLLLAYLIRNGSERVVTSAREHIYDLRSLENYHFVDE  130 (176)
T ss_dssp             HHHHHHHHHHHHHSSCT--TCHHHHHH-----HHHHHHHHHHHSCHHHHHHHHHTHHHHHGGGGCCCBCT
T ss_pred             HHHHHHHHHHHHhccCC--chhHHHHH-----HHHHHHHHHHhCCHHHHHHHHHhHHHHHhhccCeeECC
Confidence            37777888888755532  68999998     588999998765432111 0000112356677777655


No 8  
>3fga_B Serine/threonine-protein phosphatase 2A 56 kDa RE subunit gamma isoform; PP2A, shugoshin, nucleus, phosphoprotein, hydrolase, iron, M metal-binding, methylation, protein phosphatase, cell cycle division; HET: 1ZN; 2.70A {Homo sapiens} PDB: 2iae_B* 2nym_B* 2nyl_B*
Probab=14.20  E-value=4.8e+02  Score=27.75  Aligned_cols=165  Identities=15%  Similarity=0.166  Sum_probs=95.5

Q ss_pred             hHHHHHHHhhhhcccCCCCCcch---HHHHHHHHHHH--hcCccchhhhccccccc-------------CCcccCchhHH
Q 007667          326 VGLYSWAHNLLPIVGGKNCNPQS---RDIILQLVERI--LSSPKARTILVNGAVRK-------------GERLVPPSALE  387 (594)
Q Consensus       326 vGL~vW~~iLLPvL~~Ks~sp~s---rdlilqylErI--Ls~~kar~il~n~av~k-------------g~~lI~p~~f~  387 (594)
                      +--..+.++++|+...|+++-|-   ...|+||+++=  |..+=-+.++.+=..+.             =-..++|.+|.
T Consensus       209 ehk~fl~~vLlPLHk~~~~~~y~~qL~ycv~qf~eKDp~L~~~vi~~LLk~WP~tns~KevlFL~Ele~iLe~~~~~~f~  288 (403)
T 3fga_B          209 EHKIFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFV  288 (403)
T ss_dssp             HHHHHHHHTTTGGGGSTTGGGTHHHHHHHHHHHHHHCGGGHHHHHHHHHHTCCSSCHHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHhCchhHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHhCCHHHHH
Confidence            55566889999999988887553   34556666541  11111122222211110             01246677766


Q ss_pred             HHHHhhC-----CCCchhhhHHHHHHHhccchhhhhhcCCCCchhHHHHHHHHHHHHHHH----hc-cCChhhHHHHHHH
Q 007667          388 TLLRLTF-----PTSSARVKATERFEAIYPTLKEVALAGVPGSKAMKQVSLQILSFAIKF----AG-ESTPDLSNEAAGI  457 (594)
Q Consensus       388 ~ll~~tf-----P~~sarvkaterfeaiYP~LKelAlag~p~S~a~Kqv~qqiF~~~L~~----a~-~~~~~l~kE~~~~  457 (594)
                      .++.-.|     -.+|.-.+..||  |+|--..+-.+      .++.+-++.+||..+..    +. .=|+..++-+..+
T Consensus       289 ~i~~~lf~~la~ci~S~hfqVAEr--AL~~wnNe~i~------~li~~n~~~IlPii~p~L~~~~~~HWn~~v~~l~~~v  360 (403)
T 3fga_B          289 KIMEPLFRQLAKCVSSPHFQVAER--ALYYWNNEYIM------SLISDNAAKILPIMFPSLYRNSKTHWNKTIHGLIYNA  360 (403)
T ss_dssp             HHHHHHHHHHHHHHTCSCHHHHHH--HHGGGGCHHHH------HHHHTTHHHHHHHHHHHHHHTTSCCSCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHCCCCHHHHHH--HHHHhccHHHH------HHHHHhHHHHHHHHHHHHHHHHHHccCHHHHHHHHHH
Confidence            5444322     112222333443  44443333111      12234445666665543    32 2377788888888


Q ss_pred             HHHhhccCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhh
Q 007667          458 FIWCLTQSADCYKHWDKLYEANLEGSVKVLKKLSEEWKEHS  498 (594)
Q Consensus       458 lI~CLt~d~dC~k~Wr~lY~knl~qS~~LL~~L~~~W~~~s  498 (594)
                      +--....|+..|..=.+.|.+.-.....-.+.....|+.+.
T Consensus       361 lk~l~e~d~~lF~~~~~~~~~~~~~~~~~~~~r~~~W~~~~  401 (403)
T 3fga_B          361 LKLFMEMNQKLFDDCTQQFKAEKLKEKLKMKEREEAWVKIE  401 (403)
T ss_dssp             HHHHHTTSCCCCCTTHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred             HHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            88888889998888888999988888888999999998654


No 9  
>3aa0_C 21MER peptide from leucine-rich repeat-containing 16A; actin capping protein, barbed END regulation, carmil family conformational change; 1.70A {Mus musculus}
Probab=14.16  E-value=47  Score=22.32  Aligned_cols=14  Identities=29%  Similarity=0.515  Sum_probs=11.0

Q ss_pred             hhhhhcCCCCCCCC
Q 007667           33 YAKRQRKTKPGADP   46 (594)
Q Consensus        33 ~~k~~r~~~~~~~~   46 (594)
                      .|||.+||+|..+.
T Consensus         9 rpkr~kkqqps~~t   22 (26)
T 3aa0_C            9 RPKRNKKQQPTQAX   22 (26)
T ss_pred             CcchhhccCCcccc
Confidence            58999999986543


No 10 
>1inz_A EPS15-interacting portein(epsin); alpha-helix, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: a.118.9.1
Probab=13.80  E-value=1.9e+02  Score=26.65  Aligned_cols=64  Identities=20%  Similarity=0.274  Sum_probs=39.4

Q ss_pred             HHHHHHHHHHhhccCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhhcc-CCCchHHHHHHHHHhcCcccc
Q 007667          451 SNEAAGIFIWCLTQSADCYKHWDKLYEANLEGSVKVLKKLSEEWKEHSAKL-SPLDPFRATLKSFRQKNEKGI  522 (594)
Q Consensus       451 ~kE~~~~lI~CLt~d~dC~k~Wr~lY~knl~qS~~LL~~L~~~W~~~s~KL-~~~~~L~~Tlksfr~~Ne~~~  522 (594)
                      -.|+.+++--+|....   +.||..|+-     +.||.||+.+=.+.-..- ...-..-++|++|+-..+...
T Consensus        57 ~~eIm~~l~kRL~d~~---k~WR~vyKa-----L~lleyLl~nGse~vv~~~r~~~~~I~~L~~F~y~d~~g~  121 (148)
T 1inz_A           57 FSEIMSMIWKRLNDHG---KNWRHVYKA-----MTLMEYLIKTGSERVSQQCKENMYAVQTLKDFQYVDRDGK  121 (148)
T ss_dssp             HHHHHHHHHHGGGCCS---SCTHHHHHH-----HHHHHHHHHTTCHHHHHHHHHTHHHHHHHHHCCCCCSSCC
T ss_pred             HHHHHHHHHHHHccCC---cchhHhhHH-----HHHHHHHHHhCCHHHHHHHHHhHHHHHhhcceeeeCCCCc
Confidence            3677788888887544   679988885     789999987633321110 000112467777777655333


Done!