Query 007668
Match_columns 594
No_of_seqs 806 out of 5063
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 07:31:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007668.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007668hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4asz_A BDNF/NT-3 growth factor 100.0 3.5E-55 1.2E-59 436.2 17.7 257 307-581 13-289 (299)
2 4aoj_A High affinity nerve gro 100.0 1.3E-54 4.6E-59 437.9 20.1 258 307-582 41-320 (329)
3 3omv_A RAF proto-oncogene seri 100.0 5.4E-54 1.9E-58 427.5 22.2 258 306-579 35-298 (307)
4 4gt4_A Tyrosine-protein kinase 100.0 3.2E-54 1.1E-58 431.1 19.5 255 307-579 26-304 (308)
5 4b9d_A Serine/threonine-protei 100.0 1.7E-52 5.8E-57 422.6 15.6 250 306-574 23-276 (350)
6 4fih_A Serine/threonine-protei 100.0 1.6E-51 5.3E-56 414.9 21.8 249 307-574 74-323 (346)
7 4ase_A Vascular endothelial gr 100.0 3.1E-52 1E-56 424.0 16.7 272 295-583 52-349 (353)
8 3fpq_A Serine/threonine-protei 100.0 1.3E-50 4.5E-55 400.3 24.2 246 310-574 29-282 (290)
9 3hmm_A TGF-beta receptor type- 100.0 2.8E-51 9.7E-56 410.7 19.3 265 308-581 4-297 (303)
10 4g3f_A NF-kappa-beta-inducing 100.0 6.3E-51 2.2E-55 409.3 21.5 252 306-579 57-314 (336)
11 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.7E-51 5.7E-56 408.5 14.7 247 307-573 32-283 (311)
12 4fie_A Serine/threonine-protei 100.0 3.2E-50 1.1E-54 415.3 24.4 249 307-574 151-400 (423)
13 3hyh_A Carbon catabolite-derep 100.0 1.9E-50 6.3E-55 395.6 18.9 246 306-574 12-262 (275)
14 3ubd_A Ribosomal protein S6 ki 100.0 1.1E-50 3.7E-55 402.8 11.3 242 307-569 24-271 (304)
15 4g31_A Eukaryotic translation 100.0 5.3E-49 1.8E-53 392.3 18.0 248 307-574 5-279 (299)
16 3uim_A Brassinosteroid insensi 100.0 5.9E-46 2E-50 378.0 23.5 289 295-583 18-313 (326)
17 4b99_A Mitogen-activated prote 100.0 2E-46 7E-51 387.8 19.0 263 307-574 54-344 (398)
18 2qkw_B Protein kinase; three-h 100.0 7.8E-46 2.7E-50 376.3 22.7 282 299-583 31-317 (321)
19 4f9c_A Cell division cycle 7-r 100.0 1.5E-45 5.3E-50 377.2 20.1 196 306-510 20-249 (361)
20 3uto_A Twitchin; kinase, muscl 100.0 1.1E-44 3.9E-49 393.0 25.4 252 306-574 156-410 (573)
21 3v5w_A G-protein coupled recep 100.0 6.9E-45 2.4E-49 391.8 18.9 249 306-574 188-449 (689)
22 3s95_A LIMK-1, LIM domain kina 100.0 1.7E-43 5.8E-48 357.2 22.0 258 306-579 9-280 (310)
23 3kul_A Ephrin type-A receptor 100.0 1.8E-43 6.2E-48 359.3 19.5 261 307-585 49-317 (325)
24 3p86_A Serine/threonine-protei 100.0 2.5E-43 8.6E-48 355.5 20.1 264 303-585 33-302 (309)
25 3sxs_A Cytoplasmic tyrosine-pr 100.0 3E-43 1E-47 347.6 20.3 257 306-581 7-264 (268)
26 4hcu_A Tyrosine-protein kinase 100.0 1.3E-43 4.5E-48 350.5 17.1 257 306-581 9-266 (269)
27 2nru_A Interleukin-1 receptor- 100.0 6E-42 2E-46 345.3 28.9 279 295-580 13-305 (307)
28 3fxz_A Serine/threonine-protei 100.0 1.9E-42 6.6E-47 347.1 25.1 250 306-574 19-269 (297)
29 2psq_A Fibroblast growth facto 100.0 5.5E-43 1.9E-47 362.0 19.7 258 306-581 80-364 (370)
30 2qol_A Ephrin receptor; recept 100.0 3.7E-43 1.2E-47 363.6 18.0 259 306-582 44-310 (373)
31 2c30_A Serine/threonine-protei 100.0 5.6E-42 1.9E-46 347.6 25.9 261 295-574 23-294 (321)
32 3ugc_A Tyrosine-protein kinase 100.0 1.9E-43 6.5E-48 354.2 14.4 265 306-581 9-291 (295)
33 3soc_A Activin receptor type-2 100.0 5.4E-43 1.8E-47 355.4 17.6 265 306-579 23-316 (322)
34 3zgw_A Maternal embryonic leuc 100.0 4.7E-43 1.6E-47 358.2 17.2 249 306-574 9-260 (347)
35 3cbl_A C-FES, proto-oncogene t 100.0 3.6E-43 1.2E-47 364.5 16.1 257 306-580 113-373 (377)
36 3gen_A Tyrosine-protein kinase 100.0 6.1E-43 2.1E-47 348.3 16.9 257 306-581 23-280 (283)
37 4eqm_A Protein kinase; transfe 100.0 1.9E-42 6.4E-47 346.8 20.3 263 307-584 11-278 (294)
38 3fe3_A MAP/microtubule affinit 100.0 9.8E-43 3.4E-47 353.7 18.3 247 306-574 14-264 (328)
39 1mp8_A Focal adhesion kinase 1 100.0 7.3E-43 2.5E-47 347.4 16.0 256 306-580 14-275 (281)
40 3lb7_A RAF proto-oncogene seri 100.0 5E-42 1.7E-46 345.8 22.2 261 306-582 35-301 (307)
41 3vhe_A Vascular endothelial gr 100.0 8.1E-43 2.8E-47 359.7 16.0 270 295-581 10-355 (359)
42 1qcf_A Haematopoetic cell kina 100.0 1.1E-42 3.9E-47 369.6 17.0 259 305-583 186-446 (454)
43 1luf_A Muscle-specific tyrosin 100.0 3.2E-42 1.1E-46 353.0 19.4 262 305-584 45-338 (343)
44 3niz_A Rhodanese family protei 100.0 5.4E-42 1.8E-46 346.2 20.4 261 306-574 20-300 (311)
45 3t9t_A Tyrosine-protein kinase 100.0 2.1E-42 7.2E-47 341.2 16.9 257 306-581 7-264 (267)
46 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 2.7E-42 9.3E-47 366.3 18.9 260 306-585 183-444 (452)
47 4e5w_A Tyrosine-protein kinase 100.0 1.7E-42 5.9E-47 348.4 15.6 262 307-580 21-301 (302)
48 1csn_A Casein kinase-1; phosph 100.0 8.4E-42 2.9E-46 342.6 20.3 272 307-592 10-296 (298)
49 3lxl_A Tyrosine-protein kinase 100.0 2.2E-42 7.7E-47 351.7 16.3 265 307-582 23-304 (327)
50 1o6l_A RAC-beta serine/threoni 100.0 9.1E-42 3.1E-46 347.6 20.6 248 306-574 4-260 (337)
51 3poz_A Epidermal growth factor 100.0 5.6E-42 1.9E-46 348.7 19.0 255 307-580 15-277 (327)
52 1opk_A P150, C-ABL, proto-onco 100.0 2.9E-42 9.9E-47 370.0 16.7 259 306-583 219-480 (495)
53 3tt0_A Basic fibroblast growth 100.0 8.4E-42 2.9E-46 355.0 19.6 258 306-581 68-352 (382)
54 1rjb_A FL cytokine receptor; k 100.0 5.8E-42 2E-46 351.2 18.0 264 304-584 42-337 (344)
55 1ob3_A PFPK5, cell division co 100.0 1.1E-41 3.8E-46 340.1 18.9 261 307-574 2-280 (288)
56 3qup_A Tyrosine-protein kinase 100.0 1E-41 3.6E-46 346.1 18.9 259 306-582 22-299 (323)
57 4euu_A Serine/threonine-protei 100.0 9E-41 3.1E-45 338.6 25.6 268 307-581 9-309 (319)
58 3og7_A AKAP9-BRAF fusion prote 100.0 1.6E-41 5.6E-46 339.1 19.7 260 306-581 23-288 (289)
59 3l9p_A Anaplastic lymphoma kin 100.0 4.4E-42 1.5E-46 354.9 16.1 257 306-580 70-344 (367)
60 2ivs_A Proto-oncogene tyrosine 100.0 1.3E-41 4.5E-46 343.8 19.0 258 306-581 22-311 (314)
61 1k9a_A Carboxyl-terminal SRC k 100.0 2.1E-41 7.1E-46 359.3 21.4 251 306-581 192-445 (450)
62 2izr_A Casein kinase I isoform 100.0 1.4E-41 4.9E-46 346.2 19.3 260 307-581 9-281 (330)
63 1kob_A Twitchin; kinase, intra 100.0 9.6E-41 3.3E-45 346.2 25.9 252 306-574 50-304 (387)
64 3c1x_A Hepatocyte growth facto 100.0 8.3E-42 2.8E-46 353.0 17.8 266 308-591 90-365 (373)
65 4aw2_A Serine/threonine-protei 100.0 1.1E-41 3.8E-46 358.0 19.1 261 300-574 67-338 (437)
66 4fvq_A Tyrosine-protein kinase 100.0 2.3E-41 7.9E-46 337.9 20.4 254 306-584 7-278 (289)
67 2yab_A Death-associated protei 100.0 7.2E-41 2.5E-45 344.1 24.6 251 306-574 11-272 (361)
68 3h4j_B AMPK kdaid, SNF1-like p 100.0 1.3E-41 4.4E-46 346.1 18.8 246 306-574 8-258 (336)
69 3f66_A Hepatocyte growth facto 100.0 2.1E-41 7.3E-46 339.7 20.2 264 307-588 25-298 (298)
70 1qpc_A LCK kinase; alpha beta 100.0 6.3E-42 2.1E-46 340.2 15.9 257 306-582 12-270 (279)
71 3q4u_A Activin receptor type-1 100.0 2.4E-41 8.4E-46 339.7 20.4 262 306-579 7-300 (301)
72 3tki_A Serine/threonine-protei 100.0 1.2E-41 4.2E-46 345.3 18.0 252 306-574 6-261 (323)
73 3dtc_A Mitogen-activated prote 100.0 2.3E-41 7.8E-46 334.6 19.5 253 306-578 6-270 (271)
74 1p4o_A Insulin-like growth fac 100.0 6.8E-42 2.3E-46 347.3 16.1 264 301-582 19-300 (322)
75 3cc6_A Protein tyrosine kinase 100.0 1.8E-41 6E-46 337.4 18.7 256 306-580 11-272 (281)
76 4f0f_A Serine/threonine-protei 100.0 7.9E-41 2.7E-45 333.7 23.4 252 307-579 19-287 (287)
77 3kfa_A Tyrosine-protein kinase 100.0 1.7E-41 5.7E-46 338.7 17.9 258 305-581 11-271 (288)
78 2eva_A TAK1 kinase - TAB1 chim 100.0 3E-41 1E-45 340.1 19.7 254 306-581 7-263 (307)
79 1tki_A Titin; serine kinase, m 100.0 1.2E-40 4.1E-45 337.7 23.7 251 306-574 4-257 (321)
80 1t46_A HOMO sapiens V-KIT hard 100.0 2.5E-41 8.6E-46 341.6 18.6 260 306-582 22-308 (313)
81 3kmu_A ILK, integrin-linked ki 100.0 4.1E-41 1.4E-45 332.6 19.7 253 306-580 9-269 (271)
82 2pvf_A Fibroblast growth facto 100.0 1.7E-41 5.7E-46 346.3 17.4 267 306-590 34-327 (334)
83 2vd5_A DMPK protein; serine/th 100.0 2.2E-41 7.4E-46 353.3 18.6 259 301-574 55-327 (412)
84 4dc2_A Protein kinase C IOTA t 100.0 6.2E-41 2.1E-45 347.7 21.9 250 306-569 51-307 (396)
85 3qd2_B Eukaryotic translation 100.0 2.1E-41 7.3E-46 345.0 17.9 249 306-574 5-325 (332)
86 3txo_A PKC-L, NPKC-ETA, protei 100.0 1.2E-41 4.2E-46 348.9 16.2 249 305-574 21-280 (353)
87 1mqb_A Ephrin type-A receptor 100.0 4.5E-41 1.6E-45 342.8 20.1 258 307-582 44-310 (333)
88 2h8h_A Proto-oncogene tyrosine 100.0 1.1E-41 3.7E-46 368.9 16.4 261 305-585 265-527 (535)
89 2y0a_A Death-associated protei 100.0 1.5E-40 5.3E-45 337.8 23.7 249 307-574 11-271 (326)
90 2v62_A Serine/threonine-protei 100.0 4E-41 1.4E-45 345.0 19.5 274 307-590 37-337 (345)
91 3pls_A Macrophage-stimulating 100.0 5.2E-41 1.8E-45 336.8 19.9 264 308-588 22-294 (298)
92 3o0g_A Cell division protein k 100.0 7.9E-41 2.7E-45 334.7 21.1 262 307-574 2-282 (292)
93 2x4f_A Myosin light chain kina 100.0 1E-40 3.6E-45 345.0 22.3 248 310-574 92-342 (373)
94 2i1m_A Macrophage colony-stimu 100.0 1.7E-41 5.9E-46 346.1 16.3 262 302-580 41-325 (333)
95 1u59_A Tyrosine-protein kinase 100.0 4.7E-41 1.6E-45 335.4 18.9 256 307-581 9-272 (287)
96 3op5_A Serine/threonine-protei 100.0 3.7E-41 1.2E-45 348.0 18.6 268 306-582 34-330 (364)
97 3v8s_A RHO-associated protein 100.0 3.8E-41 1.3E-45 351.2 18.9 256 302-574 64-329 (410)
98 3uzp_A CKI-delta, CKID, casein 100.0 8.2E-41 2.8E-45 335.0 20.5 273 306-592 8-293 (296)
99 3cok_A Serine/threonine-protei 100.0 8.3E-41 2.8E-45 331.9 20.0 249 306-574 10-262 (278)
100 1fot_A TPK1 delta, CAMP-depend 100.0 6.9E-41 2.4E-45 338.6 19.7 245 306-574 5-258 (318)
101 3lzb_A Epidermal growth factor 100.0 4.9E-41 1.7E-45 341.6 18.6 257 307-582 15-279 (327)
102 3kex_A Receptor tyrosine-prote 100.0 1.2E-41 4.3E-46 345.9 14.1 256 307-581 13-276 (325)
103 2h34_A Serine/threonine-protei 100.0 2.6E-40 8.7E-45 333.7 23.5 263 305-584 32-299 (309)
104 3a8x_A Protein kinase C IOTA t 100.0 2.1E-40 7.3E-45 338.9 23.1 250 306-569 8-264 (345)
105 2zv2_A Calcium/calmodulin-depe 100.0 2.3E-40 7.8E-45 332.3 22.9 249 306-574 12-292 (298)
106 3p1a_A MYT1 kinase, membrane-a 100.0 6.9E-41 2.4E-45 338.2 19.2 244 307-574 57-304 (311)
107 3c0i_A Peripheral plasma membr 100.0 1.2E-40 4.1E-45 342.1 21.2 251 307-574 24-286 (351)
108 2xir_A Vascular endothelial gr 100.0 2.1E-41 7.3E-46 342.6 15.3 270 295-581 15-310 (316)
109 3lxp_A Non-receptor tyrosine-p 100.0 4.3E-41 1.5E-45 340.8 17.5 259 309-580 33-309 (318)
110 4hgt_A Casein kinase I isoform 100.0 1.1E-40 3.6E-45 334.2 20.0 273 306-592 8-293 (296)
111 3soa_A Calcium/calmodulin-depe 100.0 2.9E-40 9.9E-45 348.5 24.3 252 306-574 10-267 (444)
112 4fr4_A YANK1, serine/threonine 100.0 6.5E-41 2.2E-45 346.4 18.5 250 306-574 14-271 (384)
113 1rdq_E PKA C-alpha, CAMP-depen 100.0 7.9E-41 2.7E-45 342.7 18.9 245 306-574 40-293 (350)
114 1xjd_A Protein kinase C, theta 100.0 2.1E-41 7.2E-46 345.8 14.5 249 304-573 14-268 (345)
115 2bdw_A Hypothetical protein K1 100.0 2.7E-40 9.1E-45 340.7 22.8 251 306-574 28-284 (362)
116 3a62_A Ribosomal protein S6 ki 100.0 8.3E-41 2.8E-45 339.9 18.5 248 306-574 16-276 (327)
117 2ozo_A Tyrosine-protein kinase 100.0 8.6E-41 3E-45 367.0 19.7 249 314-581 343-598 (613)
118 3g2f_A Bone morphogenetic prot 100.0 7.8E-41 2.7E-45 341.6 17.7 274 306-586 12-323 (336)
119 1u5q_A Serine/threonine protei 100.0 2.8E-40 9.7E-45 338.6 21.7 245 307-574 54-305 (348)
120 2pmi_A Negative RE, cyclin-dep 100.0 1.7E-40 5.7E-45 336.3 19.8 262 306-574 4-293 (317)
121 2buj_A Serine/threonine-protei 100.0 1E-40 3.5E-45 337.9 18.2 261 306-582 28-307 (317)
122 2w1i_A JAK2; chromosomal rearr 100.0 3.3E-41 1.1E-45 343.0 14.5 263 307-580 41-321 (326)
123 3gni_B Strad alpha; kinase fol 100.0 2.4E-40 8.2E-45 345.1 21.1 264 306-574 24-333 (389)
124 3mdy_A Bone morphogenetic prot 100.0 6.1E-40 2.1E-44 335.0 23.3 268 304-583 34-333 (337)
125 3ork_A Serine/threonine protei 100.0 1.2E-40 4.2E-45 336.4 17.9 258 306-579 11-279 (311)
126 2i0e_A Protein kinase C-beta I 100.0 1.3E-40 4.3E-45 341.2 17.9 249 305-574 18-276 (353)
127 3kn6_A Ribosomal protein S6 ki 100.0 2.5E-40 8.5E-45 336.1 19.9 249 311-574 15-270 (325)
128 2wqm_A Serine/threonine-protei 100.0 9.5E-40 3.3E-44 329.7 24.0 259 306-580 31-296 (310)
129 3fdn_A Serine/threonine-protei 100.0 1.5E-40 5.2E-45 330.3 17.8 246 306-574 8-257 (279)
130 2w4o_A Calcium/calmodulin-depe 100.0 5.7E-40 1.9E-44 336.7 22.6 250 306-574 52-305 (349)
131 1xbb_A Tyrosine-protein kinase 100.0 2.2E-40 7.6E-45 331.2 18.8 256 306-581 15-279 (291)
132 3brb_A Proto-oncogene tyrosine 100.0 2.1E-40 7.3E-45 334.9 18.5 259 305-581 32-308 (313)
133 2y94_A 5'-AMP-activated protei 100.0 2.2E-40 7.6E-45 351.6 19.3 252 306-579 15-273 (476)
134 3uc3_A Serine/threonine-protei 100.0 5.7E-40 1.9E-44 338.2 21.7 252 306-574 19-274 (361)
135 2jii_A Serine/threonine-protei 100.0 1.7E-40 5.7E-45 341.4 17.7 272 307-592 42-349 (352)
136 4eut_A Serine/threonine-protei 100.0 3.9E-40 1.3E-44 344.0 20.5 269 307-582 9-310 (396)
137 3f3z_A Calcium/calmodulin-depe 100.0 4.7E-40 1.6E-44 326.3 19.9 250 306-574 8-261 (277)
138 3dbq_A Dual specificity protei 100.0 2.1E-40 7.2E-45 339.4 17.9 249 307-574 9-273 (343)
139 1byg_A CSK, protein (C-termina 100.0 1.9E-40 6.5E-45 329.4 16.9 250 306-580 20-272 (278)
140 3mtl_A Cell division protein k 100.0 1.5E-40 5.1E-45 337.8 16.4 260 307-574 2-281 (324)
141 4agu_A Cyclin-dependent kinase 100.0 3.7E-40 1.3E-44 332.9 19.1 264 306-574 2-284 (311)
142 3hko_A Calcium/calmodulin-depe 100.0 2.8E-40 9.6E-45 338.8 18.2 259 301-574 20-330 (345)
143 3is5_A Calcium-dependent prote 100.0 4.1E-40 1.4E-44 328.3 18.8 249 307-574 22-278 (285)
144 2eue_A Carbon catabolite derep 100.0 2.5E-40 8.5E-45 328.0 17.0 246 306-574 12-262 (275)
145 2zmd_A Dual specificity protei 100.0 3.3E-40 1.1E-44 343.5 18.6 249 307-574 56-320 (390)
146 2a2a_A Death-associated protei 100.0 1.8E-39 6.1E-44 329.4 23.5 251 306-574 11-272 (321)
147 4ejn_A RAC-alpha serine/threon 100.0 7.9E-41 2.7E-45 354.9 14.2 249 306-574 147-404 (446)
148 3e7e_A HBUB1, BUB1A, mitotic c 100.0 9.9E-40 3.4E-44 337.4 21.9 251 306-582 64-340 (365)
149 1u46_A ACK-1, activated CDC42 100.0 5.4E-40 1.9E-44 328.2 19.2 261 306-584 17-287 (291)
150 2ac3_A MAP kinase-interacting 100.0 3.2E-40 1.1E-44 334.1 17.5 257 307-574 12-295 (316)
151 3g33_A Cell division protein k 100.0 1E-39 3.5E-44 329.1 21.1 261 306-574 8-296 (308)
152 1fvr_A Tyrosine-protein kinase 100.0 2.8E-40 9.5E-45 336.3 17.0 257 306-582 24-301 (327)
153 2vgo_A Serine/threonine-protei 100.0 7.8E-40 2.7E-44 326.0 19.8 261 306-589 13-279 (284)
154 3kk8_A Calcium/calmodulin depe 100.0 3.7E-39 1.3E-43 321.0 24.6 251 306-574 5-261 (284)
155 1x8b_A WEE1HU, WEE1-like prote 100.0 6.7E-40 2.3E-44 326.8 19.3 243 306-574 10-279 (289)
156 2acx_A G protein-coupled recep 100.0 3.1E-40 1.1E-44 355.2 17.9 252 306-574 183-444 (576)
157 2yex_A Serine/threonine-protei 100.0 8.9E-40 3E-44 324.1 19.7 252 306-574 6-261 (276)
158 4fl3_A Tyrosine-protein kinase 100.0 5.7E-40 1.9E-44 361.4 20.2 248 313-580 375-630 (635)
159 2r5t_A Serine/threonine-protei 100.0 1.7E-40 5.9E-45 342.6 15.1 249 306-575 37-290 (373)
160 1ua2_A CAK, cell division prot 100.0 8.1E-40 2.8E-44 335.5 19.7 264 304-574 7-291 (346)
161 2w5a_A Serine/threonine-protei 100.0 1.6E-40 5.4E-45 330.1 13.8 257 306-578 5-271 (279)
162 2yfx_A Tyrosine-protein kinase 100.0 4.4E-40 1.5E-44 334.8 17.2 257 306-580 29-303 (327)
163 3gxj_A TGF-beta receptor type- 100.0 1.6E-41 5.4E-46 341.4 6.3 264 307-582 3-298 (303)
164 3llt_A Serine/threonine kinase 100.0 5.4E-40 1.8E-44 338.8 18.0 261 305-574 33-355 (360)
165 3dls_A PAS domain-containing s 100.0 3.2E-40 1.1E-44 336.6 16.0 241 306-574 23-274 (335)
166 3ttj_A Mitogen-activated prote 100.0 7.6E-40 2.6E-44 348.0 19.4 260 306-574 61-355 (464)
167 2j7t_A Serine/threonine-protei 100.0 9.5E-40 3.3E-44 328.3 19.0 252 306-574 18-275 (302)
168 2clq_A Mitogen-activated prote 100.0 1.2E-39 4E-44 326.5 19.5 251 307-574 22-278 (295)
169 3oz6_A Mitogen-activated prote 100.0 9.8E-40 3.4E-44 340.3 19.7 261 305-574 7-328 (388)
170 1vzo_A Ribosomal protein S6 ki 100.0 1.3E-40 4.5E-45 342.4 12.9 253 306-574 53-321 (355)
171 3pg1_A Mitogen-activated prote 100.0 9.6E-40 3.3E-44 337.2 19.3 270 299-574 14-316 (362)
172 3byv_A Rhoptry kinase; malaria 100.0 3.5E-40 1.2E-44 342.2 15.9 240 306-574 72-359 (377)
173 3bhy_A Death-associated protei 100.0 4E-39 1.4E-43 320.6 23.0 250 307-574 5-265 (283)
174 2rku_A Serine/threonine-protei 100.0 1.1E-39 3.7E-44 326.7 18.9 248 306-574 14-265 (294)
175 1b6c_B TGF-B superfamily recep 100.0 3.9E-39 1.3E-43 329.8 23.3 267 303-581 38-336 (342)
176 2a19_B Interferon-induced, dou 100.0 1E-39 3.5E-44 324.9 18.4 250 307-585 11-278 (284)
177 2jam_A Calcium/calmodulin-depe 100.0 3.3E-39 1.1E-43 324.8 21.9 250 306-574 8-261 (304)
178 3rp9_A Mitogen-activated prote 100.0 1.1E-39 3.6E-44 347.6 19.3 193 307-504 53-280 (458)
179 3eqc_A Dual specificity mitoge 100.0 1.2E-39 4.3E-44 336.1 19.0 262 307-574 33-324 (360)
180 1cm8_A Phosphorylated MAP kina 100.0 1.5E-39 5.2E-44 335.8 19.6 262 307-578 25-313 (367)
181 3ll6_A Cyclin G-associated kin 100.0 9E-40 3.1E-44 333.6 17.7 255 307-581 28-308 (337)
182 2qr7_A Ribosomal protein S6 ki 100.0 1.1E-39 3.8E-44 333.2 18.3 251 306-574 21-277 (342)
183 2j0j_A Focal adhesion kinase 1 100.0 7.9E-40 2.7E-44 361.6 18.5 257 305-580 388-650 (656)
184 3mi9_A Cell division protein k 100.0 9.9E-40 3.4E-44 335.6 17.8 265 306-574 16-311 (351)
185 3c4z_A Rhodopsin kinase; Ser/T 100.0 1E-39 3.6E-44 350.3 18.6 251 307-573 185-447 (543)
186 1nxk_A MAP kinase-activated pr 100.0 2.2E-39 7.6E-44 338.2 20.6 249 307-574 61-321 (400)
187 2h6d_A 5'-AMP-activated protei 100.0 1.4E-39 5E-44 322.6 17.9 247 306-574 10-261 (276)
188 2owb_A Serine/threonine-protei 100.0 1.2E-39 4E-44 332.7 17.6 252 306-578 40-297 (335)
189 3com_A Serine/threonine-protei 100.0 2.5E-39 8.7E-44 327.2 19.6 250 306-574 28-278 (314)
190 3a7i_A MST3 kinase, serine/thr 100.0 1.8E-39 6.2E-44 326.5 18.4 248 306-574 21-270 (303)
191 3q60_A ROP5B; pseudokinase, tr 100.0 4.1E-40 1.4E-44 341.0 14.0 253 307-574 62-352 (371)
192 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1E-39 3.5E-44 332.3 16.7 264 303-574 30-318 (329)
193 3sv0_A Casein kinase I-like; t 100.0 2.6E-39 8.8E-44 344.1 20.4 262 307-582 7-279 (483)
194 2vwi_A Serine/threonine-protei 100.0 6.7E-40 2.3E-44 329.5 14.9 257 306-574 14-287 (303)
195 1t4h_A Serine/threonine-protei 100.0 1.4E-38 4.8E-43 317.9 24.2 248 308-574 27-282 (290)
196 4aaa_A Cyclin-dependent kinase 100.0 1.1E-39 3.9E-44 332.3 15.8 264 306-574 24-306 (331)
197 3fme_A Dual specificity mitoge 100.0 1.7E-39 5.8E-44 324.4 16.6 251 306-574 6-266 (290)
198 3i6u_A CDS1, serine/threonine- 100.0 1.6E-39 5.5E-44 341.6 17.0 252 305-574 133-399 (419)
199 3n9x_A Phosphotransferase; mal 100.0 8.9E-39 3.1E-43 337.4 22.4 199 306-509 25-253 (432)
200 2y7j_A Phosphorylase B kinase 100.0 2.2E-38 7.6E-43 326.9 24.9 254 303-574 90-359 (365)
201 3lm5_A Serine/threonine-protei 100.0 1.3E-38 4.4E-43 323.9 22.6 252 306-574 27-287 (327)
202 2pml_X PFPK7, Ser/Thr protein 100.0 2.1E-39 7.3E-44 332.7 16.9 258 306-574 30-322 (348)
203 3mwu_A Calmodulin-domain prote 100.0 6.6E-39 2.3E-43 343.9 20.3 250 306-574 21-276 (486)
204 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.4E-39 4.9E-44 329.7 14.2 258 305-582 31-303 (319)
205 2r3i_A Cell division protein k 100.0 3.5E-39 1.2E-43 323.8 16.8 262 306-574 2-283 (299)
206 2wtk_C Serine/threonine-protei 100.0 1.2E-38 4E-43 320.9 20.3 254 306-579 4-270 (305)
207 3lij_A Calcium/calmodulin depe 100.0 8.1E-39 2.8E-43 343.8 20.1 250 306-574 36-291 (494)
208 3nsz_A CK II alpha, casein kin 100.0 1.4E-38 4.8E-43 324.1 20.6 253 307-574 36-319 (330)
209 3qyz_A Mitogen-activated prote 100.0 2E-38 7E-43 327.4 22.0 260 306-574 26-313 (364)
210 3pfq_A PKC-B, PKC-beta, protei 100.0 4.7E-39 1.6E-43 356.5 18.1 248 305-573 339-596 (674)
211 2fst_X Mitogen-activated prote 100.0 1.5E-39 5.2E-44 335.5 13.1 255 307-574 29-311 (367)
212 3nyv_A Calmodulin-domain prote 100.0 4.4E-39 1.5E-43 345.3 17.1 250 306-574 25-281 (484)
213 2x7f_A TRAF2 and NCK-interacti 100.0 2.6E-38 8.9E-43 321.5 21.8 251 305-574 22-286 (326)
214 1zy4_A Serine/threonine-protei 100.0 1.9E-38 6.7E-43 318.6 20.5 251 306-574 5-283 (303)
215 1wak_A Serine/threonine-protei 100.0 7.7E-39 2.6E-43 334.5 18.2 260 307-574 37-391 (397)
216 3an0_A Dual specificity mitoge 100.0 3.3E-39 1.1E-43 330.2 15.1 251 306-574 50-310 (340)
217 2xrw_A Mitogen-activated prote 100.0 3E-38 1E-42 326.9 22.3 260 306-574 24-318 (371)
218 3eb0_A Putative uncharacterize 100.0 2.9E-38 9.9E-43 328.5 21.7 259 304-574 4-321 (383)
219 3kvw_A DYRK2, dual specificity 100.0 2.4E-38 8.1E-43 333.6 21.2 197 307-512 97-303 (429)
220 3q5i_A Protein kinase; CDPK, m 100.0 1.7E-38 5.8E-43 342.1 20.5 250 306-574 35-301 (504)
221 1phk_A Phosphorylase kinase; g 100.0 2.1E-38 7E-43 318.0 19.7 251 306-574 16-283 (298)
222 1z57_A Dual specificity protei 100.0 2E-38 6.9E-43 323.8 19.8 259 307-574 14-328 (339)
223 1blx_A Cyclin-dependent kinase 100.0 1.4E-38 4.8E-43 323.4 18.4 262 305-574 9-296 (326)
224 2i6l_A Mitogen-activated prote 100.0 4.1E-39 1.4E-43 326.2 14.1 262 307-574 11-305 (320)
225 2vx3_A Dual specificity tyrosi 100.0 5.2E-38 1.8E-42 326.5 22.7 200 306-512 53-262 (382)
226 2b9h_A MAP kinase FUS3, mitoge 100.0 1.6E-38 5.5E-43 326.8 17.8 260 306-574 10-305 (353)
227 2ycf_A Serine/threonine-protei 100.0 9.8E-39 3.4E-43 324.1 15.7 251 306-574 9-274 (322)
228 3coi_A Mitogen-activated prote 100.0 4E-38 1.4E-42 323.9 20.4 255 307-574 24-305 (353)
229 4e7w_A Glycogen synthase kinas 100.0 1E-38 3.5E-43 332.8 16.0 256 307-574 40-321 (394)
230 3rgf_A Cyclin-dependent kinase 100.0 8.3E-39 2.8E-43 335.2 14.8 197 309-511 22-239 (405)
231 1j1b_A Glycogen synthase kinas 100.0 6E-38 2.1E-42 329.7 21.3 256 307-574 54-336 (420)
232 4exu_A Mitogen-activated prote 100.0 2.8E-38 9.6E-43 327.1 18.5 255 307-574 42-323 (371)
233 3e3p_A Protein kinase, putativ 100.0 4.7E-38 1.6E-42 324.2 19.7 269 299-574 15-314 (360)
234 3cek_A Dual specificity protei 100.0 4E-38 1.4E-42 318.3 17.8 250 306-574 27-292 (313)
235 3p23_A Serine/threonine-protei 100.0 3.7E-38 1.3E-42 331.9 17.9 248 307-574 24-283 (432)
236 3aln_A Dual specificity mitoge 100.0 5E-38 1.7E-42 319.6 18.1 253 306-574 21-285 (327)
237 2wei_A Calmodulin-domain prote 100.0 2E-37 7E-42 309.0 22.0 250 306-574 21-276 (287)
238 2dyl_A Dual specificity mitoge 100.0 1.7E-37 5.7E-42 314.3 20.3 252 306-574 24-283 (318)
239 3fhr_A MAP kinase-activated pr 100.0 8.1E-38 2.8E-42 319.1 17.9 256 306-579 27-294 (336)
240 2rio_A Serine/threonine-protei 100.0 1.5E-37 5.2E-42 328.1 20.1 248 309-574 17-295 (434)
241 2eu9_A Dual specificity protei 100.0 1.6E-37 5.6E-42 319.3 19.7 259 307-574 19-333 (355)
242 1q8y_A SR protein kinase; tran 100.0 8.1E-38 2.8E-42 324.0 17.3 264 307-578 19-339 (373)
243 2iwi_A Serine/threonine-protei 100.0 6.2E-38 2.1E-42 316.7 14.9 243 303-574 27-283 (312)
244 3a99_A Proto-oncogene serine/t 100.0 9.5E-38 3.2E-42 316.5 14.2 240 306-574 42-293 (320)
245 3qa8_A MGC80376 protein; kinas 100.0 2.9E-37 9.9E-42 335.3 16.1 264 306-579 13-307 (676)
246 2pzi_A Probable serine/threoni 100.0 1.9E-36 6.5E-41 337.6 18.2 237 307-578 80-325 (681)
247 3uqc_A Probable conserved tran 100.0 3.7E-36 1.3E-40 299.4 16.7 231 307-584 31-268 (286)
248 3dzo_A Rhoptry kinase domain; 100.0 4.2E-36 1.4E-40 314.9 15.5 238 307-573 78-362 (413)
249 3m2w_A MAP kinase-activated pr 100.0 4.8E-35 1.6E-39 293.7 20.5 232 306-580 16-264 (299)
250 2vuw_A Serine/threonine-protei 100.0 5.3E-36 1.8E-40 305.8 12.0 241 306-573 19-329 (336)
251 4azs_A Methyltransferase WBDD; 100.0 8.2E-29 2.8E-33 268.6 9.2 184 315-507 242-437 (569)
252 1ogq_A PGIP-2, polygalacturona 99.9 7.6E-27 2.6E-31 235.3 12.8 175 27-203 2-186 (313)
253 3en9_A Glycoprotease, O-sialog 99.9 1.6E-26 5.5E-31 249.2 8.3 184 310-508 339-538 (540)
254 3rgz_A Protein brassinosteroid 99.9 5.8E-24 2E-28 240.4 10.2 175 24-202 5-211 (768)
255 3e6j_A Variable lymphocyte rec 99.9 3.6E-23 1.2E-27 198.5 14.2 152 56-208 14-176 (229)
256 2v9t_B SLIT homolog 2 protein 99.9 7.4E-23 2.5E-27 195.0 11.6 151 60-210 10-171 (220)
257 1zar_A RIO2 kinase; serine kin 99.9 5.4E-23 1.8E-27 203.3 10.9 151 301-481 84-252 (282)
258 4fcg_A Uncharacterized protein 99.9 3.9E-23 1.3E-27 209.5 8.1 176 26-204 22-219 (328)
259 4ecn_A Leucine-rich repeat pro 99.9 2.4E-23 8E-28 234.7 6.1 171 29-204 267-561 (876)
260 2v70_A SLIT-2, SLIT homolog 2 99.9 2.7E-22 9.2E-27 191.1 11.2 151 60-210 10-172 (220)
261 4eco_A Uncharacterized protein 99.9 9.7E-23 3.3E-27 225.2 7.1 173 30-204 29-318 (636)
262 2o6s_A Variable lymphocyte rec 99.9 1.3E-21 4.6E-26 184.7 13.7 150 59-208 5-165 (208)
263 3m19_A Variable lymphocyte rec 99.8 6.3E-20 2.2E-24 178.5 13.3 136 71-206 58-194 (251)
264 3rgz_A Protein brassinosteroid 99.8 2E-20 6.9E-25 211.4 10.5 124 92-216 628-751 (768)
265 3oja_A Leucine-rich immune mol 99.8 5.7E-22 2E-26 211.8 -2.2 146 60-208 108-254 (487)
266 3m19_A Variable lymphocyte rec 99.8 8.3E-20 2.9E-24 177.7 12.5 133 72-204 35-168 (251)
267 1p9a_G Platelet glycoprotein I 99.8 1E-19 3.5E-24 180.8 13.3 139 70-209 75-213 (290)
268 2wfh_A SLIT homolog 2 protein 99.8 9.5E-20 3.3E-24 169.5 11.9 132 75-210 13-145 (193)
269 1w8a_A SLIT protein; signaling 99.8 8E-20 2.7E-24 170.0 11.0 133 75-210 11-145 (192)
270 3rfs_A Internalin B, repeat mo 99.8 2E-19 6.8E-24 177.2 13.6 139 70-208 83-222 (272)
271 1ogq_A PGIP-2, polygalacturona 99.8 2.8E-20 9.5E-25 187.2 7.3 138 73-213 175-312 (313)
272 1w8a_A SLIT protein; signaling 99.8 3.1E-20 1E-24 172.9 6.7 151 60-210 7-168 (192)
273 2o6q_A Variable lymphocyte rec 99.8 3.6E-19 1.2E-23 175.1 13.6 138 71-208 84-222 (270)
274 2o6q_A Variable lymphocyte rec 99.8 7E-19 2.4E-23 173.1 13.7 132 72-203 37-169 (270)
275 1zth_A RIO1 serine protein kin 99.8 1.4E-19 4.8E-24 176.6 8.4 137 309-458 49-220 (258)
276 2o6r_A Variable lymphocyte rec 99.8 1.1E-18 3.8E-23 160.0 12.3 129 77-208 12-141 (177)
277 1ozn_A Reticulon 4 receptor; N 99.8 4.5E-19 1.5E-23 175.9 9.3 140 71-210 104-244 (285)
278 2xot_A Amphoterin-induced prot 99.8 2.9E-19 1E-23 183.5 8.1 138 72-209 64-207 (361)
279 3v47_A TOLL-like receptor 5B a 99.8 1.3E-18 4.5E-23 184.6 10.3 137 72-208 275-412 (455)
280 4g8a_A TOLL-like receptor 4; l 99.7 2.3E-18 7.8E-23 190.4 11.6 134 71-204 51-186 (635)
281 2z66_A Variable lymphocyte rec 99.7 2.3E-18 8E-23 172.6 9.4 139 71-209 125-266 (306)
282 2ell_A Acidic leucine-rich nuc 99.7 2.9E-18 9.8E-23 155.9 9.0 131 71-203 23-159 (168)
283 2wfh_A SLIT homolog 2 protein 99.7 1.9E-18 6.6E-23 160.6 7.6 124 60-184 9-142 (193)
284 2je0_A Acidic leucine-rich nuc 99.7 4.2E-18 1.4E-22 151.4 7.0 128 71-200 16-149 (149)
285 2z62_A TOLL-like receptor 4, v 99.7 8.3E-18 2.8E-22 165.9 9.8 138 71-208 75-241 (276)
286 4g8a_A TOLL-like receptor 4; l 99.7 7.7E-18 2.6E-22 186.1 10.2 140 71-210 444-586 (635)
287 3vq2_A TLR4, TOLL-like recepto 99.7 5.1E-18 1.8E-22 186.8 8.5 140 71-210 423-564 (606)
288 3zyj_A Leucine-rich repeat-con 99.7 1E-17 3.6E-22 176.8 10.5 138 71-210 135-298 (440)
289 2z62_A TOLL-like receptor 4, v 99.7 1.9E-17 6.4E-22 163.4 10.8 132 72-203 28-161 (276)
290 2v70_A SLIT-2, SLIT homolog 2 99.7 4.6E-18 1.6E-22 161.7 5.7 116 70-185 55-170 (220)
291 1ozn_A Reticulon 4 receptor; N 99.7 3.1E-17 1E-21 162.6 11.3 133 71-203 31-165 (285)
292 3zyi_A Leucine-rich repeat-con 99.7 2.1E-17 7.2E-22 175.1 10.7 138 71-210 146-309 (452)
293 3rfs_A Internalin B, repeat mo 99.7 6.8E-17 2.3E-21 159.0 12.6 132 71-204 62-194 (272)
294 4fcg_A Uncharacterized protein 99.7 2.4E-17 8.3E-22 166.7 8.9 132 71-205 103-243 (328)
295 2z80_A TOLL-like receptor 2, v 99.7 2.5E-17 8.5E-22 168.6 8.9 145 58-203 27-186 (353)
296 1p9a_G Platelet glycoprotein I 99.7 7.3E-17 2.5E-21 160.2 11.5 130 71-203 54-184 (290)
297 2v9t_B SLIT homolog 2 protein 99.7 1E-16 3.4E-21 152.4 11.9 133 65-204 8-141 (220)
298 3v47_A TOLL-like receptor 5B a 99.7 2.6E-17 8.8E-22 174.6 8.6 146 59-204 6-167 (455)
299 3e6j_A Variable lymphocyte rec 99.7 1.2E-16 4E-21 152.9 11.8 136 62-204 13-148 (229)
300 3o53_A Protein LRIM1, AGAP0063 99.7 2.8E-17 9.6E-22 165.6 7.7 144 62-208 110-254 (317)
301 4ezg_A Putative uncharacterize 99.7 5.5E-17 1.9E-21 151.5 9.0 128 71-203 65-193 (197)
302 3vq2_A TLR4, TOLL-like recepto 99.7 6.3E-17 2.1E-21 178.1 11.0 134 71-204 31-166 (606)
303 2xwt_C Thyrotropin receptor; s 99.7 5.2E-17 1.8E-21 156.5 8.8 132 71-204 30-169 (239)
304 3zyi_A Leucine-rich repeat-con 99.7 9.9E-17 3.4E-21 169.9 11.6 134 71-204 74-209 (452)
305 2id5_A Lingo-1, leucine rich r 99.7 8E-17 2.7E-21 171.9 10.9 134 71-204 31-165 (477)
306 2z81_A CD282 antigen, TOLL-lik 99.7 4.5E-17 1.5E-21 177.0 9.1 144 60-204 3-161 (549)
307 3zyj_A Leucine-rich repeat-con 99.7 1E-16 3.4E-21 169.2 11.1 134 71-204 63-198 (440)
308 3j0a_A TOLL-like receptor 5; m 99.7 1.4E-16 4.8E-21 181.8 12.3 136 71-210 425-566 (844)
309 2z63_A TOLL-like receptor 4, v 99.7 7.7E-17 2.6E-21 175.9 9.8 139 71-209 395-536 (570)
310 3t6q_A CD180 antigen; protein- 99.7 5.1E-17 1.7E-21 178.8 8.3 139 71-210 424-566 (606)
311 3a79_B TLR6, VLRB.59, TOLL-lik 99.7 1E-16 3.6E-21 174.6 10.3 139 71-210 352-516 (562)
312 1ziw_A TOLL-like receptor 3; i 99.7 8.7E-17 3E-21 179.5 9.9 139 71-209 479-627 (680)
313 3o6n_A APL1; leucine-rich repe 99.7 7.5E-17 2.6E-21 167.4 8.7 133 72-204 45-178 (390)
314 3g39_A Variable lymphocyte rec 99.7 2.3E-16 7.8E-21 143.5 10.8 109 75-186 12-120 (170)
315 1a9n_A U2A', U2A'; complex (nu 99.7 9.6E-17 3.3E-21 146.9 8.2 127 71-202 18-151 (176)
316 4b8c_D Glucose-repressible alc 99.7 7.1E-17 2.4E-21 180.3 8.9 174 28-205 129-330 (727)
317 3oja_B Anopheles plasmodium-re 99.7 8.3E-17 2.8E-21 176.6 9.2 133 72-204 51-184 (597)
318 2z7x_B TOLL-like receptor 1, v 99.7 8.8E-17 3E-21 173.5 9.2 139 71-210 323-487 (520)
319 2o6r_A Variable lymphocyte rec 99.7 1.9E-16 6.4E-21 145.1 9.7 127 60-186 6-142 (177)
320 2o6s_A Variable lymphocyte rec 99.7 1.7E-16 6E-21 149.4 9.2 129 70-204 50-178 (208)
321 3t6q_A CD180 antigen; protein- 99.6 2.2E-16 7.5E-21 173.7 10.7 134 71-204 32-166 (606)
322 3j0a_A TOLL-like receptor 5; m 99.6 2.3E-16 7.9E-21 180.0 10.9 144 60-204 13-161 (844)
323 2z66_A Variable lymphocyte rec 99.6 2.2E-16 7.4E-21 158.2 9.0 132 71-203 77-211 (306)
324 2r9u_A Variable lymphocyte rec 99.6 5.6E-16 1.9E-20 141.3 10.8 110 75-187 15-124 (174)
325 3g39_A Variable lymphocyte rec 99.6 5.8E-16 2E-20 140.8 10.4 109 97-208 10-119 (170)
326 2id5_A Lingo-1, leucine rich r 99.6 1.6E-16 5.4E-21 169.6 7.2 140 71-210 175-339 (477)
327 2r9u_A Variable lymphocyte rec 99.6 4.1E-16 1.4E-20 142.3 8.9 107 99-208 15-122 (174)
328 4ezg_A Putative uncharacterize 99.6 2.2E-16 7.4E-21 147.4 7.1 128 71-203 43-171 (197)
329 1ziw_A TOLL-like receptor 3; i 99.6 5.8E-16 2E-20 172.8 11.7 134 71-204 24-158 (680)
330 4gyi_A RIO2 kinase; protein ki 99.6 1.4E-15 4.9E-20 154.0 12.4 143 303-457 91-265 (397)
331 1xku_A Decorin; proteoglycan, 99.6 8.3E-16 2.9E-20 155.7 10.5 141 60-203 30-183 (330)
332 2ft3_A Biglycan; proteoglycan, 99.6 1E-15 3.6E-20 155.1 10.8 140 61-204 33-185 (332)
333 1dce_A Protein (RAB geranylger 99.6 9.7E-16 3.3E-20 165.9 10.7 121 73-198 442-567 (567)
334 4eco_A Uncharacterized protein 99.6 3.2E-16 1.1E-20 173.0 6.4 144 60-204 192-366 (636)
335 2z81_A CD282 antigen, TOLL-lik 99.6 9.5E-16 3.2E-20 166.5 9.8 134 72-209 361-515 (549)
336 2z63_A TOLL-like receptor 4, v 99.6 1.4E-15 5E-20 165.8 10.1 134 71-204 27-162 (570)
337 1wwl_A Monocyte differentiatio 99.6 4.6E-16 1.6E-20 156.3 5.2 130 72-202 121-264 (312)
338 3o6n_A APL1; leucine-rich repe 99.6 2.5E-15 8.4E-20 155.9 10.9 131 71-203 68-198 (390)
339 2xwt_C Thyrotropin receptor; s 99.6 7E-16 2.4E-20 148.6 6.3 130 71-202 54-190 (239)
340 4glp_A Monocyte differentiatio 99.6 1.3E-15 4.4E-20 152.9 8.4 130 71-203 144-284 (310)
341 1xeu_A Internalin C; cellular 99.6 2E-15 7E-20 147.5 9.5 126 71-206 62-187 (263)
342 3oja_B Anopheles plasmodium-re 99.6 2.5E-15 8.5E-20 164.8 10.9 131 71-203 74-204 (597)
343 2ft3_A Biglycan; proteoglycan, 99.6 3.8E-15 1.3E-19 150.9 11.3 131 73-203 124-276 (332)
344 3a79_B TLR6, VLRB.59, TOLL-lik 99.6 2.2E-15 7.5E-20 164.2 10.1 134 65-203 45-181 (562)
345 2ifg_A High affinity nerve gro 99.6 2.1E-15 7.2E-20 153.8 9.3 135 61-209 8-146 (347)
346 1wwl_A Monocyte differentiatio 99.6 8E-16 2.7E-20 154.5 6.0 131 72-204 149-287 (312)
347 2z80_A TOLL-like receptor 2, v 99.6 8.4E-16 2.9E-20 157.2 6.2 133 70-203 74-210 (353)
348 1xku_A Decorin; proteoglycan, 99.6 4.9E-15 1.7E-19 150.0 11.3 131 72-202 121-274 (330)
349 1h6t_A Internalin B; cell adhe 99.6 4.4E-15 1.5E-19 147.4 10.5 124 71-203 67-190 (291)
350 4ecn_A Leucine-rich repeat pro 99.6 1.2E-15 4.2E-20 172.0 6.2 142 61-204 435-608 (876)
351 2xot_A Amphoterin-induced prot 99.6 5.8E-15 2E-19 151.4 10.6 144 61-204 18-176 (361)
352 4glp_A Monocyte differentiatio 99.6 1.5E-15 5.2E-20 152.3 5.8 130 70-204 167-307 (310)
353 1h6u_A Internalin H; cell adhe 99.6 4.2E-15 1.4E-19 148.9 8.2 129 69-206 82-210 (308)
354 2z7x_B TOLL-like receptor 1, v 99.6 2.2E-15 7.5E-20 162.5 6.6 128 71-203 20-150 (520)
355 1xeu_A Internalin C; cellular 99.5 7.7E-15 2.6E-19 143.4 9.3 125 71-205 40-164 (263)
356 1h6u_A Internalin H; cell adhe 99.5 9.9E-15 3.4E-19 146.2 10.2 125 71-204 62-186 (308)
357 1h6t_A Internalin B; cell adhe 99.5 6.2E-15 2.1E-19 146.3 8.5 128 69-205 87-214 (291)
358 2ell_A Acidic leucine-rich nuc 99.5 4.5E-15 1.5E-19 134.6 6.5 113 71-186 48-165 (168)
359 1ds9_A Outer arm dynein; leuci 99.5 2.4E-17 8.4E-22 154.0 -9.1 129 73-206 19-155 (198)
360 2ifg_A High affinity nerve gro 99.5 9.9E-15 3.4E-19 148.9 9.5 109 99-209 11-121 (347)
361 3oja_A Leucine-rich immune mol 99.5 5E-15 1.7E-19 158.0 7.5 128 72-204 99-227 (487)
362 4b8c_D Glucose-repressible alc 99.5 1.8E-15 6E-20 169.0 3.9 132 70-205 222-355 (727)
363 2je0_A Acidic leucine-rich nuc 99.5 7E-15 2.4E-19 130.4 6.3 108 94-203 15-125 (149)
364 3cvr_A Invasion plasmid antige 99.5 6E-15 2E-19 159.0 6.4 134 50-203 33-172 (571)
365 1m9s_A Internalin B; cell inva 99.5 2.4E-14 8.1E-19 156.0 11.0 124 71-203 64-187 (605)
366 4fmz_A Internalin; leucine ric 99.5 1.4E-14 4.9E-19 147.6 8.4 128 71-206 198-326 (347)
367 3o53_A Protein LRIM1, AGAP0063 99.5 1.1E-14 3.7E-19 146.5 5.9 128 72-204 99-227 (317)
368 1m9s_A Internalin B; cell inva 99.5 3.2E-14 1.1E-18 155.0 9.2 126 70-204 85-210 (605)
369 1ds9_A Outer arm dynein; leuci 99.5 5.2E-16 1.8E-20 144.9 -6.2 125 71-202 47-183 (198)
370 4ay9_X Follicle-stimulating ho 99.5 5.7E-14 1.9E-18 143.4 8.0 143 61-203 9-166 (350)
371 1o6v_A Internalin A; bacterial 99.5 8E-14 2.7E-18 148.1 8.8 125 71-204 242-366 (466)
372 1a9n_A U2A', U2A'; complex (nu 99.4 6E-14 2E-18 128.2 5.8 111 90-204 13-126 (176)
373 3bz5_A Internalin-J, INLJ; leu 99.4 3.6E-13 1.2E-17 142.3 11.5 119 71-202 41-159 (457)
374 3cvr_A Invasion plasmid antige 99.4 2.2E-13 7.4E-18 146.9 9.6 121 64-204 93-220 (571)
375 1o6v_A Internalin A; bacterial 99.4 2.6E-13 8.7E-18 144.2 9.9 126 71-205 220-345 (466)
376 4fmz_A Internalin; leucine ric 99.4 2.9E-13 1E-17 137.8 9.1 124 71-203 176-299 (347)
377 1dce_A Protein (RAB geranylger 99.4 4.2E-13 1.4E-17 145.2 9.0 103 97-204 442-546 (567)
378 3g06_A SSPH2 (leucine-rich rep 99.4 1.1E-13 3.6E-18 151.1 4.3 136 49-203 11-153 (622)
379 3bz5_A Internalin-J, INLJ; leu 99.4 1.6E-12 5.6E-17 137.3 12.3 130 61-203 95-224 (457)
380 2ca6_A RAN GTPase-activating p 99.3 3.8E-14 1.3E-18 146.8 -2.6 133 72-204 159-316 (386)
381 2ast_B S-phase kinase-associat 99.3 3E-14 1E-18 144.5 -3.6 130 72-202 70-206 (336)
382 3g06_A SSPH2 (leucine-rich rep 99.3 2.5E-12 8.5E-17 140.3 11.1 56 144-203 241-296 (622)
383 1jl5_A Outer protein YOPM; leu 99.3 3.7E-12 1.3E-16 134.4 11.7 117 72-203 111-227 (454)
384 1jl5_A Outer protein YOPM; leu 99.3 8.1E-13 2.8E-17 139.5 3.9 125 72-203 11-165 (454)
385 3goz_A Leucine-rich repeat-con 99.3 1.4E-13 4.9E-18 141.0 -1.9 132 72-203 22-179 (362)
386 4ay9_X Follicle-stimulating ho 99.3 4.1E-12 1.4E-16 129.5 8.7 125 75-202 12-139 (350)
387 3tm0_A Aminoglycoside 3'-phosp 99.3 8.2E-12 2.8E-16 121.8 10.3 148 301-455 8-212 (263)
388 2ast_B S-phase kinase-associat 99.3 1.2E-13 4.3E-18 139.9 -3.0 139 59-202 35-179 (336)
389 2ca6_A RAN GTPase-activating p 99.3 1.2E-13 4.1E-18 143.0 -3.7 131 72-202 94-255 (386)
390 3goz_A Leucine-rich repeat-con 99.2 7.7E-13 2.6E-17 135.6 0.5 129 76-204 2-151 (362)
391 1nd4_A Aminoglycoside 3'-phosp 99.1 7.1E-11 2.4E-15 114.8 8.3 136 308-455 21-213 (264)
392 1z7x_W Ribonuclease inhibitor; 99.1 9.2E-13 3.2E-17 139.6 -6.8 131 72-202 227-381 (461)
393 1z7x_W Ribonuclease inhibitor; 99.0 5.5E-12 1.9E-16 133.6 -5.8 130 73-202 86-238 (461)
394 3dxp_A Putative acyl-COA dehyd 99.0 1.1E-09 3.6E-14 112.0 11.1 142 311-456 42-248 (359)
395 3un9_A NLR family member X1; l 99.0 1E-11 3.6E-16 127.2 -4.5 132 72-203 101-251 (372)
396 3rw6_A Nuclear RNA export fact 99.0 2.5E-11 8.4E-16 117.2 -2.6 65 118-184 168-236 (267)
397 3sg8_A APH(2'')-ID; antibiotic 98.9 1E-09 3.4E-14 109.4 7.4 187 312-509 25-288 (304)
398 3sb4_A Hypothetical leucine ri 98.9 1.2E-09 4.3E-14 110.0 6.9 129 71-202 100-308 (329)
399 3sb4_A Hypothetical leucine ri 98.9 3.1E-09 1E-13 107.1 8.1 102 95-198 225-328 (329)
400 3un9_A NLR family member X1; l 98.8 3.5E-11 1.2E-15 123.3 -7.5 132 72-203 72-223 (372)
401 3rw6_A Nuclear RNA export fact 98.7 1.9E-09 6.4E-14 104.0 -0.7 80 93-174 167-257 (267)
402 3ogk_B Coronatine-insensitive 98.7 4.7E-10 1.6E-14 122.7 -5.8 131 72-202 378-524 (592)
403 3ogk_B Coronatine-insensitive 98.7 3.6E-09 1.2E-13 115.6 0.9 104 73-177 139-252 (592)
404 3r70_A Aminoglycoside phosphot 98.6 2.7E-07 9.1E-12 92.4 14.3 144 301-457 28-238 (320)
405 3d1u_A Putative fructosamine-3 98.6 3.3E-07 1.1E-11 90.0 13.1 139 311-455 19-215 (288)
406 1io0_A Tropomodulin; LRR prote 98.6 2.5E-09 8.7E-14 98.0 -2.7 111 71-181 35-164 (185)
407 2p1m_B Transport inhibitor res 98.5 5.3E-09 1.8E-13 114.3 -4.0 129 72-202 372-517 (594)
408 3tdw_A Gentamicin resistance p 98.4 2.4E-06 8.2E-11 84.8 14.5 136 312-456 24-224 (306)
409 1io0_A Tropomodulin; LRR prote 98.4 1.3E-08 4.6E-13 93.1 -2.3 115 88-202 28-162 (185)
410 2p1m_B Transport inhibitor res 98.4 1.3E-08 4.3E-13 111.3 -4.3 129 72-201 105-245 (594)
411 4gkh_A Aminoglycoside 3'-phosp 98.3 3.7E-06 1.2E-10 81.8 12.5 135 313-455 30-222 (272)
412 3ovc_A Hygromycin-B 4-O-kinase 98.3 2.6E-06 8.9E-11 86.6 11.7 142 310-457 44-244 (362)
413 2ra8_A Uncharacterized protein 98.3 6.3E-08 2.1E-12 98.3 -0.7 127 72-202 172-318 (362)
414 3ats_A Putative uncharacterize 98.3 1.3E-06 4.4E-11 88.8 8.9 80 313-392 26-122 (357)
415 4fdw_A Leucine rich hypothetic 98.3 9.3E-07 3.2E-11 91.2 7.8 126 72-203 226-357 (401)
416 4fdw_A Leucine rich hypothetic 98.3 1.1E-06 3.6E-11 90.8 7.6 125 72-201 203-333 (401)
417 2ra8_A Uncharacterized protein 98.2 2.2E-07 7.4E-12 94.3 0.0 130 71-202 192-341 (362)
418 2q83_A YTAA protein; 2635576, 98.0 3.7E-05 1.3E-09 77.3 12.7 138 313-455 38-251 (346)
419 3rfe_A Platelet glycoprotein I 98.0 7.4E-06 2.5E-10 69.8 5.8 60 148-209 12-73 (130)
420 2olc_A MTR kinase, methylthior 97.9 3.2E-05 1.1E-09 79.7 10.9 75 312-388 35-120 (397)
421 3e4g_A ATP synthase subunit S, 97.9 2.5E-06 8.4E-11 76.2 1.4 83 97-179 62-150 (176)
422 3f7w_A Putative fructosamine-3 97.9 9E-05 3.1E-09 72.6 11.9 77 310-390 18-97 (288)
423 3jr1_A Putative fructosamine-3 97.8 0.00015 5.1E-09 71.7 12.7 137 311-452 40-232 (312)
424 3e4g_A ATP synthase subunit S, 97.6 8.3E-06 2.8E-10 72.8 0.6 87 72-158 61-154 (176)
425 2yle_A Protein spire homolog 1 97.5 0.00064 2.2E-08 62.1 10.9 148 387-584 32-204 (229)
426 4gt6_A Cell surface protein; l 97.5 0.00013 4.3E-09 75.1 6.9 112 87-202 256-368 (394)
427 2pyw_A Uncharacterized protein 97.5 0.00056 1.9E-08 70.8 11.8 79 425-504 231-312 (420)
428 3rfe_A Platelet glycoprotein I 97.4 0.00017 5.7E-09 61.3 5.7 37 145-181 32-68 (130)
429 2ppq_A HSK, HK, homoserine kin 97.4 0.00046 1.6E-08 68.6 9.6 157 296-455 6-216 (322)
430 1pgv_A TMD-1, tropomodulin TMD 97.4 1.4E-05 4.8E-10 72.7 -1.7 62 72-133 41-111 (197)
431 4h09_A Hypothetical leucine ri 97.3 0.00043 1.5E-08 70.6 8.7 125 73-201 218-343 (379)
432 3dxq_A Choline/ethanolamine ki 97.3 0.00079 2.7E-08 66.2 9.8 74 309-390 20-95 (301)
433 4gt6_A Cell surface protein; l 97.3 0.00043 1.5E-08 71.0 8.1 124 72-201 265-388 (394)
434 1nw1_A Choline kinase (49.2 KD 97.2 0.0011 3.7E-08 68.8 9.5 72 313-390 79-159 (429)
435 4fs7_A Uncharacterized protein 97.1 0.00055 1.9E-08 70.2 7.1 84 115-201 292-376 (394)
436 1zyl_A Hypothetical protein YI 97.1 0.005 1.7E-07 61.1 13.7 156 297-456 11-223 (328)
437 3csv_A Aminoglycoside phosphot 97.1 0.0031 1.1E-07 62.8 11.8 139 313-456 24-217 (333)
438 3feg_A Choline/ethanolamine ki 97.1 0.0021 7.1E-08 65.2 10.3 139 313-456 56-254 (379)
439 4fs7_A Uncharacterized protein 97.0 0.0012 4.1E-08 67.7 8.2 124 72-201 71-195 (394)
440 4h09_A Hypothetical leucine ri 97.0 0.00087 3E-08 68.3 6.8 108 72-183 240-347 (379)
441 3c5i_A Choline kinase; choline 96.8 0.0028 9.7E-08 64.2 8.6 73 313-390 39-121 (369)
442 2qg7_A Ethanolamine kinase PV0 96.7 0.0086 2.9E-07 62.4 11.8 74 312-390 113-188 (458)
443 1pgv_A TMD-1, tropomodulin TMD 96.7 0.00029 9.9E-09 64.0 0.4 87 92-178 37-136 (197)
444 3i1a_A Spectinomycin phosphotr 96.6 0.0072 2.5E-07 60.4 9.6 32 425-456 205-236 (339)
445 3f2s_A CK, chetk-alpha, cholin 96.1 0.027 9.3E-07 57.3 11.0 139 313-455 58-279 (401)
446 3mes_A Choline kinase; malaria 94.9 0.086 2.9E-06 54.1 9.5 138 313-456 76-291 (424)
447 3g15_A CK, chetk-alpha, cholin 91.5 0.26 8.8E-06 50.2 6.5 30 427-456 245-280 (401)
448 2ks1_B Epidermal growth factor 87.3 0.3 1E-05 31.8 2.0 28 244-271 13-40 (44)
449 4ano_A ESSB; membrane protein, 86.6 2.3 7.9E-05 38.8 8.3 116 361-510 48-164 (219)
450 4ann_A ESSB; membrane protein, 85.6 1.7 5.8E-05 39.5 6.9 117 361-510 43-159 (215)
451 2l2t_A Receptor tyrosine-prote 84.1 0.35 1.2E-05 31.5 1.1 28 244-271 12-39 (44)
452 2jwa_A Receptor tyrosine-prote 80.0 0.56 1.9E-05 30.4 0.9 25 246-270 15-39 (44)
453 3cxl_A N-chimerin; SH2, RHO-GA 78.2 0.22 7.5E-06 51.8 -2.2 59 311-372 146-213 (463)
454 2lz0_A Uncharacterized protein 57.5 29 0.00098 27.0 6.6 46 83-129 7-52 (100)
455 2lz0_A Uncharacterized protein 56.7 22 0.00076 27.7 5.8 46 107-153 7-52 (100)
456 2k9y_A Ephrin type-A receptor 46.5 5.8 0.0002 25.2 0.7 12 245-256 16-27 (41)
457 3ls8_A Phosphatidylinositol 3- 38.3 2.8E+02 0.0096 29.3 12.3 46 403-455 454-501 (614)
458 1cja_A Protein (actin-fragmin 32.2 1.6E+02 0.0053 28.6 8.4 134 314-456 76-237 (342)
459 2l8s_A Integrin alpha-1; trans 23.3 32 0.0011 23.3 1.3 22 241-262 9-31 (54)
460 2fq3_A Transcription regulator 22.5 1E+02 0.0035 24.1 4.3 46 533-578 34-79 (104)
No 1
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=3.5e-55 Score=436.17 Aligned_cols=257 Identities=21% Similarity=0.384 Sum_probs=213.9
Q ss_pred cCCCccceeeeecceEEEEEEec------CCcEEEEEeecccchhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEE
Q 007668 307 ETLDDDHIIGSGGFGTVYKLAMD------DGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLL 380 (594)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l 380 (594)
++|...+.||+|+||+||+|.+. ++..||||+++..+....+.|.+|+++|++++|||||+++|+|.+++..++
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 92 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 92 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 46777899999999999999864 478899999988777777889999999999999999999999999999999
Q ss_pred EEEccCCCchhhhhhhcC------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEE
Q 007668 381 IYDFLPGGSLDEALHERS------------EQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARV 448 (594)
Q Consensus 381 v~e~~~~gsL~~~l~~~~------------~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l 448 (594)
||||+++|+|.++++.+. ..++|..++.|+.|||+||+|||+ .+|+||||||+|||+++++.+||
T Consensus 93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDlKp~NILl~~~~~~Ki 169 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLAS---QHFVHRDLATRNCLVGENLLVKI 169 (299)
T ss_dssp EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCccCHhhEEECCCCcEEE
Confidence 999999999999997532 469999999999999999999995 49999999999999999999999
Q ss_pred eecccccccccCCcee-eeeeecccCccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHHHH
Q 007668 449 SDFGLAKLLEDEESHI-TTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLNFL 526 (594)
Q Consensus 449 ~Dfgl~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 526 (594)
+|||+++......... .....||++|||||++.++.++.++|||||||++|||+| |+.||...... +.....
T Consensus 170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~------~~~~~i 243 (299)
T 4asz_A 170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN------EVIECI 243 (299)
T ss_dssp CCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH------HHHHHH
T ss_pred CCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH------HHHHHH
Confidence 9999998765444332 234569999999999999999999999999999999999 89999764322 111222
Q ss_pred hcccccccccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccC
Q 007668 527 ISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVM 581 (594)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~~ 581 (594)
..... ...+...+.++.+|+.+||+.||++|||++||.+.|++...
T Consensus 244 ~~~~~---------~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~ 289 (299)
T 4asz_A 244 TQGRV---------LQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAK 289 (299)
T ss_dssp HHTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HcCCC---------CCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 11111 11223345679999999999999999999999999988644
No 2
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=1.3e-54 Score=437.94 Aligned_cols=258 Identities=22% Similarity=0.402 Sum_probs=208.2
Q ss_pred cCCCccceeeeecceEEEEEEec------CCcEEEEEeecccchhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEE
Q 007668 307 ETLDDDHIIGSGGFGTVYKLAMD------DGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLL 380 (594)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l 380 (594)
++|...+.||+|+||+||+|.++ +++.||||+++..+....+.|.+|+++|++++|||||+++|+|.+....++
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 45667789999999999999865 478899999988777777889999999999999999999999999999999
Q ss_pred EEEccCCCchhhhhhhcC--------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcE
Q 007668 381 IYDFLPGGSLDEALHERS--------------EQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEA 446 (594)
Q Consensus 381 v~e~~~~gsL~~~l~~~~--------------~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ 446 (594)
||||+++|+|.++++.+. ..++|.+++.|+.|||+||+|||+ .+|+||||||+|||+++++.+
T Consensus 121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDLKp~NILl~~~~~~ 197 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG---LHFVHRDLATRNCLVGQGLVV 197 (329)
T ss_dssp EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTTEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecccccHhhEEECCCCcE
Confidence 999999999999997532 359999999999999999999995 499999999999999999999
Q ss_pred EEeecccccccccCCc-eeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHH
Q 007668 447 RVSDFGLAKLLEDEES-HITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLN 524 (594)
Q Consensus 447 ~l~Dfgl~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~ 524 (594)
||+|||+++....... .......||++|||||++.+..++.++|||||||++|||+| |+.||...... +.+.
T Consensus 198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~------~~~~ 271 (329)
T 4aoj_A 198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT------EAID 271 (329)
T ss_dssp EECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHH------HHHH
T ss_pred EEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHH------HHHH
Confidence 9999999987654332 23345679999999999999999999999999999999999 89999764321 1112
Q ss_pred HHhcccccccccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccCC
Q 007668 525 FLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVMT 582 (594)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~~~ 582 (594)
....... + ..+...+.++.+|+.+||+.||++|||++||++.|+.+...
T Consensus 272 ~i~~g~~------~---~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~ 320 (329)
T 4aoj_A 272 CITQGRE------L---ERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320 (329)
T ss_dssp HHHHTCC------C---CCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred HHHcCCC------C---CCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence 2211111 1 11223456799999999999999999999999999987654
No 3
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=5.4e-54 Score=427.52 Aligned_cols=258 Identities=26% Similarity=0.438 Sum_probs=206.3
Q ss_pred hcCCCccceeeeecceEEEEEEecCCcEEEEEeeccc--chhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEEEE
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKL--NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYD 383 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e 383 (594)
.+++...+.||+|+||+||+|.+++ .||||+++.. +....+.|.+|++++++++|||||+++|+|.+ +..++|||
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmE 111 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEE
Confidence 4577888999999999999998764 5899998743 33445789999999999999999999999865 56899999
Q ss_pred ccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccCC-c
Q 007668 384 FLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEE-S 462 (594)
Q Consensus 384 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~-~ 462 (594)
|+++|+|.++++.....++|..+..|+.|||+||+|||+ .+||||||||+|||+++++.+||+|||+|+...... .
T Consensus 112 y~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~---~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~ 188 (307)
T 3omv_A 112 WCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS 188 (307)
T ss_dssp CCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCCSSSEEEETTEEEEECCCSSCBC-------
T ss_pred cCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCccCHHHEEECCCCcEEEeeccCceecccCCcc
Confidence 999999999998777789999999999999999999995 499999999999999999999999999998765432 2
Q ss_pred eeeeeeecccCccCcccccc---CCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCCC
Q 007668 463 HITTIVAGTFGYLAPEYMQS---GRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPN 539 (594)
Q Consensus 463 ~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (594)
.......||+.|||||++.+ +.++.++|||||||++|||+||+.||...... ..+...+... ...+.
T Consensus 189 ~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~------~~~~~~~~~~----~~~p~ 258 (307)
T 3omv_A 189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR------DQIIFMVGRG----YASPD 258 (307)
T ss_dssp -----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH------HHHHHHHHTT----CCCCC
T ss_pred eeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChH------HHHHHHHhcC----CCCCC
Confidence 23345689999999999864 46899999999999999999999999753211 1111111111 12222
Q ss_pred CCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 007668 540 CEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESE 579 (594)
Q Consensus 540 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~ 579 (594)
....+...+..+.+|+.+||+.||++||||+||++.|+..
T Consensus 259 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l 298 (307)
T 3omv_A 259 LSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELL 298 (307)
T ss_dssp STTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHH
T ss_pred cccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 3333445567899999999999999999999999988754
No 4
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=3.2e-54 Score=431.05 Aligned_cols=255 Identities=21% Similarity=0.353 Sum_probs=209.9
Q ss_pred cCCCccceeeeecceEEEEEEec------CCcEEEEEeeccc-chhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceE
Q 007668 307 ETLDDDHIIGSGGFGTVYKLAMD------DGNVFALKRIDKL-NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKL 379 (594)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 379 (594)
..++..+.||+|+||+||+|.+. +++.||||+++.. .....+.|.+|+.++++++|||||+++|+|.++...+
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~ 105 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLS 105 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEE
Confidence 34556789999999999999863 4678999999753 3334678999999999999999999999999999999
Q ss_pred EEEEccCCCchhhhhhhc---------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCC
Q 007668 380 LIYDFLPGGSLDEALHER---------------SEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNL 444 (594)
Q Consensus 380 lv~e~~~~gsL~~~l~~~---------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~ 444 (594)
+||||+++|+|.++|+.+ ...++|..+++|+.|||+||+|||+ .+||||||||+|||+++++
T Consensus 106 lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDLK~~NILl~~~~ 182 (308)
T 4gt4_A 106 MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSS---HHVVHKDLATRNVLVYDKL 182 (308)
T ss_dssp EEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGG
T ss_pred EEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCCCCCCccccceEECCCC
Confidence 999999999999999643 2358999999999999999999995 4999999999999999999
Q ss_pred cEEEeecccccccccCCc-eeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCCcchhcccchHHHH
Q 007668 445 EARVSDFGLAKLLEDEES-HITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGW 522 (594)
Q Consensus 445 ~~~l~Dfgl~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~ 522 (594)
.+||+|||+++.....+. .......||++|||||++.++.++.++|||||||++|||+| |+.||...... +.
T Consensus 183 ~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~------~~ 256 (308)
T 4gt4_A 183 NVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ------DV 256 (308)
T ss_dssp CEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHH------HH
T ss_pred CEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHH------HH
Confidence 999999999987654332 22345679999999999999999999999999999999999 89999764322 11
Q ss_pred HHHHhcccccccccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 007668 523 LNFLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESE 579 (594)
Q Consensus 523 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~ 579 (594)
........ . .+.+...+..+.+|+.+||+.||++||||+||++.|+..
T Consensus 257 ~~~i~~~~-~--------~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 257 VEMIRNRQ-V--------LPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp HHHHHTTC-C--------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred HHHHHcCC-C--------CCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 12211111 1 112334457799999999999999999999999999864
No 5
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=1.7e-52 Score=422.58 Aligned_cols=250 Identities=25% Similarity=0.405 Sum_probs=203.7
Q ss_pred hcCCCccceeeeecceEEEEEEec-CCcEEEEEeeccc--chhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEEE
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKL--NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIY 382 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ 382 (594)
.++|+..+.||+|+||+||+|... +|+.||||++... .....+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVm 102 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVM 102 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence 468999999999999999999764 6899999999753 3344577999999999999999999999999999999999
Q ss_pred EccCCCchhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccCC
Q 007668 383 DFLPGGSLDEALHER-SEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEE 461 (594)
Q Consensus 383 e~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~ 461 (594)
||+++|+|.+++..+ ...+++..++.++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++......
T Consensus 103 Ey~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 179 (350)
T 4b9d_A 103 DYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHD---RKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV 179 (350)
T ss_dssp ECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH---TTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHH
T ss_pred eCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCHHHEEECCCCCEEEcccccceeecCCc
Confidence 999999999999754 3457999999999999999999995 499999999999999999999999999998765432
Q ss_pred ceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCCCCC
Q 007668 462 SHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCE 541 (594)
Q Consensus 462 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (594)
. .....+||+.|||||++.+..++.++||||+||++|||++|+.||...... ..+....... .+
T Consensus 180 ~-~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~------~~~~~i~~~~---------~~ 243 (350)
T 4b9d_A 180 E-LARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMK------NLVLKIISGS---------FP 243 (350)
T ss_dssp H-HHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH------HHHHHHHHTC---------CC
T ss_pred c-cccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH------HHHHHHHcCC---------CC
Confidence 1 223467999999999999999999999999999999999999999764321 1122222111 11
Q ss_pred CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 542 GVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 542 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
..+...+.++.+|+.+||+.||++|||++|+++
T Consensus 244 ~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 244 PVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 122334567999999999999999999999975
No 6
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=1.6e-51 Score=414.88 Aligned_cols=249 Identities=22% Similarity=0.372 Sum_probs=209.3
Q ss_pred cCCCccceeeeecceEEEEEEec-CCcEEEEEeecccchhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEEEEcc
Q 007668 307 ETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDFL 385 (594)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~ 385 (594)
+.|+..+.||+|+||+||+|... +|+.||||++........+.+.+|+++|++++|||||++++++.+++..|+||||+
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 46888899999999999999765 68999999997655555667899999999999999999999999999999999999
Q ss_pred CCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccCCceee
Q 007668 386 PGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHIT 465 (594)
Q Consensus 386 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~~~~~ 465 (594)
++|+|.+++.. ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++++||+|||+++.+..... ..
T Consensus 154 ~gg~L~~~l~~--~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~-~~ 227 (346)
T 4fih_A 154 EGGALTDIVTH--TRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP-RR 227 (346)
T ss_dssp TTEEHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC-CB
T ss_pred CCCcHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEECCCCCEEEecCcCceecCCCCC-cc
Confidence 99999999975 469999999999999999999995 4999999999999999999999999999987764433 23
Q ss_pred eeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCCCCCCCCH
Q 007668 466 TIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQS 545 (594)
Q Consensus 466 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (594)
...+||+.|||||++.+..|+.++||||+||++|||++|+.||......+ ........ ..+... ...
T Consensus 228 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~------~~~~i~~~------~~~~~~-~~~ 294 (346)
T 4fih_A 228 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK------AMKMIRDN------LPPRLK-NLH 294 (346)
T ss_dssp CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH------HHHHHHHS------SCCCCS-CGG
T ss_pred cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH------HHHHHHcC------CCCCCC-ccc
Confidence 45689999999999999999999999999999999999999997643221 11111111 111111 123
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 546 ESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 546 ~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
..+.++.+|+.+||+.||++|||++|+++
T Consensus 295 ~~s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 295 KVSPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp GSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred cCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 34577899999999999999999999876
No 7
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=3.1e-52 Score=424.05 Aligned_cols=272 Identities=26% Similarity=0.385 Sum_probs=220.1
Q ss_pred CCCCHHHHHHHhcCCCccceeeeecceEEEEEEecC------CcEEEEEeecccc-hhhHHHHHHHHHHHhhCCC-Ceee
Q 007668 295 LPYSSKDIIKKLETLDDDHIIGSGGFGTVYKLAMDD------GNVFALKRIDKLN-EGFDRFFERELEILGSIKH-RYLV 366 (594)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h-~niv 366 (594)
.++...+++...++|+..+.||+|+||+||+|.+.. ++.||||+++... ....+.|.+|+++|.+++| ||||
T Consensus 52 lp~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV 131 (353)
T 4ase_A 52 LPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131 (353)
T ss_dssp SCCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred CCCCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEE
Confidence 356666676677899999999999999999997653 3579999997643 3345679999999999965 8999
Q ss_pred eeeeEEeCC-CceEEEEEccCCCchhhhhhhc---------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeee
Q 007668 367 NLRGYCNSP-TSKLLIYDFLPGGSLDEALHER---------------SEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIH 430 (594)
Q Consensus 367 ~l~g~~~~~-~~~~lv~e~~~~gsL~~~l~~~---------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH 430 (594)
+++|+|.+. ...++|||||++|+|.++|+.. ...+++..+..++.|||+||+|||+ .+|||
T Consensus 132 ~l~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~---~~iiH 208 (353)
T 4ase_A 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIH 208 (353)
T ss_dssp CEEEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHH---TTCCC
T ss_pred EEEEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhh---CCeec
Confidence 999999764 5689999999999999999753 2348999999999999999999995 49999
Q ss_pred CCCCCCCeEecCCCcEEEeecccccccccCCc-eeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHh-CCCCC
Q 007668 431 RDIKSSNILLDGNLEARVSDFGLAKLLEDEES-HITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPT 508 (594)
Q Consensus 431 ~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~ 508 (594)
|||||+|||+++++.+||+|||+|+....+.. .......||++|||||++.++.++.++|||||||++|||+| |+.||
T Consensus 209 RDLK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf 288 (353)
T 4ase_A 209 RDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 288 (353)
T ss_dssp SCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSS
T ss_pred CccCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCC
Confidence 99999999999999999999999997655443 33445679999999999999999999999999999999998 99999
Q ss_pred CcchhcccchHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccCCC
Q 007668 509 DASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVMTP 583 (594)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~~~~ 583 (594)
....... .+...+..... + ..+...+.++.+++.+||+.||++|||++||++.|++.+...
T Consensus 289 ~~~~~~~------~~~~~i~~g~~-----~---~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~~ 349 (353)
T 4ase_A 289 PGVKIDE------EFCRRLKEGTR-----M---RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 349 (353)
T ss_dssp TTCCCSH------HHHHHHHHTCC-----C---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred CCCCHHH------HHHHHHHcCCC-----C---CCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHHh
Confidence 7643211 11111111110 1 112234467899999999999999999999999998876543
No 8
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=1.3e-50 Score=400.26 Aligned_cols=246 Identities=24% Similarity=0.378 Sum_probs=196.3
Q ss_pred CccceeeeecceEEEEEEec-CCcEEEEEeeccc--chhhHHHHHHHHHHHhhCCCCeeeeeeeEEeC----CCceEEEE
Q 007668 310 DDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKL--NEGFDRFFERELEILGSIKHRYLVNLRGYCNS----PTSKLLIY 382 (594)
Q Consensus 310 ~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~----~~~~~lv~ 382 (594)
...+.||+|+||+||+|... ++..||+|++... .....+.|.+|++++++++|||||++++++.+ +...++||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 45578999999999999765 5889999999643 33445679999999999999999999999854 34578999
Q ss_pred EccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEec-CCCcEEEeecccccccccCC
Q 007668 383 DFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLD-GNLEARVSDFGLAKLLEDEE 461 (594)
Q Consensus 383 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~-~~~~~~l~Dfgl~~~~~~~~ 461 (594)
||+++|+|.+++++. ..+++..+..++.||+.||+|||++ .++|+||||||+|||++ .++.+||+|||+|+.....
T Consensus 109 Ey~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~- 185 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRF-KVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS- 185 (290)
T ss_dssp ECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTT-
T ss_pred eCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEEEeCcCCEeCCCC-
Confidence 999999999999764 5799999999999999999999965 33499999999999998 4789999999999864432
Q ss_pred ceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCCCCC
Q 007668 462 SHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCE 541 (594)
Q Consensus 462 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (594)
.....+||+.|||||++.+ .++.++|||||||++|||+||+.||..... ............ ....
T Consensus 186 --~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~-----~~~~~~~i~~~~-~~~~------ 250 (290)
T 3fpq_A 186 --FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN-----AAQIYRRVTSGV-KPAS------ 250 (290)
T ss_dssp --SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSS-----HHHHHHHHTTTC-CCGG------
T ss_pred --ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCc-----HHHHHHHHHcCC-CCCC------
Confidence 2345689999999998865 699999999999999999999999964321 111111111111 1111
Q ss_pred CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 542 GVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 542 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
.+...++++.+|+.+||+.||++|||++|+++
T Consensus 251 -~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 251 -FDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp -GGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred -CCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 11223356899999999999999999999875
No 9
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.8e-51 Score=410.69 Aligned_cols=265 Identities=24% Similarity=0.349 Sum_probs=202.5
Q ss_pred CCCccceeeeecceEEEEEEecCCcEEEEEeecccchhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCC----ceEEEEE
Q 007668 308 TLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPT----SKLLIYD 383 (594)
Q Consensus 308 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~----~~~lv~e 383 (594)
+|...+.||+|+||+||+|.+ +|+.||||++...... ...+..|+..+.+++|||||+++|+|.++. ..++|||
T Consensus 4 ~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~-~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~E 81 (303)
T 3hmm_A 4 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD 81 (303)
T ss_dssp GEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred EEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchh-hHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEec
Confidence 466778999999999999988 5899999999754322 233445666677899999999999997654 4689999
Q ss_pred ccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcC-----CCCeeeCCCCCCCeEecCCCcEEEeecccccccc
Q 007668 384 FLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDC-----SPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLE 458 (594)
Q Consensus 384 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~-----~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~ 458 (594)
|+++|+|.++++. ..++|+.+.+++.|+++||+|||+++ +++|+||||||+|||++.++++||+|||+++...
T Consensus 82 y~~~gsL~~~l~~--~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~ 159 (303)
T 3hmm_A 82 YHEHGSLFDYLNR--YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 159 (303)
T ss_dssp CCTTCBHHHHHHH--CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEE
T ss_pred CCCCCcHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCcccc
Confidence 9999999999976 45899999999999999999999642 4599999999999999999999999999998765
Q ss_pred cCCcee---eeeeecccCccCccccccC------CCCccchhhhHHHHHHHHHhCCCCCCcchhccc---------chHH
Q 007668 459 DEESHI---TTIVAGTFGYLAPEYMQSG------RATEKTDVYSFGVLVLEVLSGKRPTDASFIEKG---------LNIV 520 (594)
Q Consensus 459 ~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~---------~~~~ 520 (594)
...... .....||+.|||||++.+. .++.++|||||||++|||+||..|+........ ....
T Consensus 160 ~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~ 239 (303)
T 3hmm_A 160 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVE 239 (303)
T ss_dssp TTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHH
T ss_pred CCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHH
Confidence 443322 2345799999999998764 367899999999999999999888754322111 0111
Q ss_pred HHHHHHhcccccccccCCCCCC--CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccC
Q 007668 521 GWLNFLISEDRQREIIDPNCEG--VQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVM 581 (594)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~~ 581 (594)
. ....+.. ...+|.++. ...+....+.+|+.+||+.||++||||+||++.|+++..
T Consensus 240 ~-~~~~~~~----~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~ 297 (303)
T 3hmm_A 240 E-MRKVVCE----QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297 (303)
T ss_dssp H-HHHHHTT----SCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred H-HHHHHhc----ccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHH
Confidence 1 1111111 122333332 223556789999999999999999999999999987543
No 10
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=6.3e-51 Score=409.29 Aligned_cols=252 Identities=23% Similarity=0.303 Sum_probs=204.9
Q ss_pred hcCCCccceeeeecceEEEEEEec-CCcEEEEEeecccchhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEEEEc
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDF 384 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~ 384 (594)
.+.|...+.||+|+||+||+|... +|+.||||+++.... ..+|++++++++|||||++++++.++...++||||
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 131 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL 131 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence 456777889999999999999865 689999999975322 24699999999999999999999999999999999
Q ss_pred cCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCC-cEEEeecccccccccCCce
Q 007668 385 LPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNL-EARVSDFGLAKLLEDEESH 463 (594)
Q Consensus 385 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~-~~~l~Dfgl~~~~~~~~~~ 463 (594)
+++|+|.++++.. +.+++..+..++.||+.||+||| +.+|+||||||+|||++.++ ++||+|||+++....+...
T Consensus 132 ~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~ 207 (336)
T 4g3f_A 132 LEGGSLGQLIKQM-GCLPEDRALYYLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLG 207 (336)
T ss_dssp CTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC------
T ss_pred cCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcc
Confidence 9999999999864 56999999999999999999999 45999999999999999887 6999999999977543321
Q ss_pred ----eeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCCC
Q 007668 464 ----ITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPN 539 (594)
Q Consensus 464 ----~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (594)
.....+||+.|||||++.+..++.++||||+||++|||++|+.||........ . .........
T Consensus 208 ~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~---~---~~i~~~~~~------- 274 (336)
T 4g3f_A 208 KSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPL---C---LKIASEPPP------- 274 (336)
T ss_dssp ------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCC---H---HHHHHSCCG-------
T ss_pred cceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH---H---HHHHcCCCC-------
Confidence 12335799999999999999999999999999999999999999976433221 1 111111110
Q ss_pred CCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 007668 540 CEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESE 579 (594)
Q Consensus 540 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~ 579 (594)
....+...+..+.+++.+||+.||++|||++|+++.|...
T Consensus 275 ~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~ 314 (336)
T 4g3f_A 275 IREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKA 314 (336)
T ss_dssp GGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred chhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHH
Confidence 0112233457789999999999999999999999887664
No 11
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1.7e-51 Score=408.50 Aligned_cols=247 Identities=21% Similarity=0.336 Sum_probs=208.3
Q ss_pred cCCCccceeeeecceEEEEEEec-CCcEEEEEeeccc---chhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEEE
Q 007668 307 ETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKL---NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIY 382 (594)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ 382 (594)
++|+..+.||+|+||+||+|... +|+.||||++.+. .....+.+.+|++++++++|||||++++++.+++..++||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 56889999999999999999764 6899999999753 2334567999999999999999999999999999999999
Q ss_pred EccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccCCc
Q 007668 383 DFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEES 462 (594)
Q Consensus 383 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~~ 462 (594)
||+++|+|.+++++. +.+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+|+.+.....
T Consensus 112 Ey~~gG~L~~~i~~~-~~l~e~~~~~~~~qi~~al~ylH~---~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~ 187 (311)
T 4aw0_A 112 SYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK 187 (311)
T ss_dssp CCCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTT
T ss_pred ecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCC
Confidence 999999999999764 569999999999999999999995 4999999999999999999999999999998764432
Q ss_pred -eeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCCCCC
Q 007668 463 -HITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCE 541 (594)
Q Consensus 463 -~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (594)
......+||+.|||||++.+..++.++||||+||++|||++|+.||...... .......... ..
T Consensus 188 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~------~~~~~i~~~~-------~~-- 252 (311)
T 4aw0_A 188 QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEG------LIFAKIIKLE-------YD-- 252 (311)
T ss_dssp CCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHTC-------CC--
T ss_pred cccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHcCC-------CC--
Confidence 3345678999999999999999999999999999999999999999764322 1111111111 01
Q ss_pred CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 007668 542 GVQSESLDALLAVATQCVSSSPDDRPTMHRVV 573 (594)
Q Consensus 542 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~ 573 (594)
.+...+.++.+|+.+||+.||++|||++|++
T Consensus 253 -~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 253 -FPEKFFPKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp -CCTTCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred -CCcccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence 1223446789999999999999999999864
No 12
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=3.2e-50 Score=415.25 Aligned_cols=249 Identities=22% Similarity=0.372 Sum_probs=209.2
Q ss_pred cCCCccceeeeecceEEEEEEec-CCcEEEEEeecccchhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEEEEcc
Q 007668 307 ETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDFL 385 (594)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~ 385 (594)
+.|+..+.||+|+||+||+|... +|+.||||++........+.+.+|+++|++++|||||++++++.+.+..|+|||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~ 230 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence 56888999999999999999765 68999999997655555667899999999999999999999999999999999999
Q ss_pred CCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccCCceee
Q 007668 386 PGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHIT 465 (594)
Q Consensus 386 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~~~~~ 465 (594)
++|+|.++++. ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++.+..... ..
T Consensus 231 ~gG~L~~~i~~--~~l~e~~~~~~~~qil~aL~ylH~---~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~-~~ 304 (423)
T 4fie_A 231 EGGALTDIVTH--TRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP-RR 304 (423)
T ss_dssp TTEEHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCC-CB
T ss_pred CCCcHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHH---CCeecccCCHHHEEEcCCCCEEEecCccceECCCCCc-cc
Confidence 99999999975 459999999999999999999995 4999999999999999999999999999987765433 23
Q ss_pred eeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCCCCCCCCH
Q 007668 466 TIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQS 545 (594)
Q Consensus 466 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (594)
...+||+.|||||++.+..|+.++|||||||++|||++|+.||......+ .+...... ..+... ...
T Consensus 305 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~------~~~~i~~~------~~~~~~-~~~ 371 (423)
T 4fie_A 305 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK------AMKMIRDN------LPPRLK-NLH 371 (423)
T ss_dssp CCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH------HHHHHHHS------CCCCCS-CTT
T ss_pred cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH------HHHHHHcC------CCCCCc-ccc
Confidence 45689999999999999999999999999999999999999997643221 11111111 011111 112
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 546 ESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 546 ~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
..+..+.+|+.+||+.||++|||++|+++
T Consensus 372 ~~s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 372 KVSPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp SSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred cCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 34467899999999999999999999886
No 13
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.9e-50 Score=395.64 Aligned_cols=246 Identities=23% Similarity=0.387 Sum_probs=191.4
Q ss_pred hcCCCccceeeeecceEEEEEEec-CCcEEEEEeeccc---chhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEE
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKL---NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLI 381 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv 381 (594)
..+|+..+.||+|+||+||+|... +|+.||||++.+. .....+.+.+|++++++++|||||++++++.+++..++|
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv 91 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 468999999999999999999764 6899999999753 233456799999999999999999999999999999999
Q ss_pred EEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccCC
Q 007668 382 YDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEE 461 (594)
Q Consensus 382 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~ 461 (594)
|||+ +|+|.+++.++ +.+++..+..++.||+.||+|||+ .+|+||||||+|||++.++++||+|||+|+......
T Consensus 92 mEy~-~g~L~~~l~~~-~~l~e~~~~~~~~qi~~al~ylH~---~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~ 166 (275)
T 3hyh_A 92 IEYA-GNELFDYIVQR-DKMSEQEARRFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166 (275)
T ss_dssp EECC-CEEHHHHHHHS-CSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCTTTEEECTTCCEEECCSSCC-------
T ss_pred EeCC-CCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCChHHeEECCCCCEEEeecCCCeecCCCC
Confidence 9999 68999999764 579999999999999999999995 499999999999999999999999999998765432
Q ss_pred ceeeeeeecccCccCccccccCCC-CccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCCCC
Q 007668 462 SHITTIVAGTFGYLAPEYMQSGRA-TEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNC 540 (594)
Q Consensus 462 ~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 540 (594)
.....+||+.|+|||++.+..+ +.++||||+||++|||++|+.||...... .......... .
T Consensus 167 --~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~------~~~~~i~~~~-------~-- 229 (275)
T 3hyh_A 167 --FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP------VLFKNISNGV-------Y-- 229 (275)
T ss_dssp ----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHTC-------C--
T ss_pred --ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHH------HHHHHHHcCC-------C--
Confidence 2345679999999999998776 58999999999999999999999764221 1112111111 0
Q ss_pred CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 541 EGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 541 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
..+...+..+.+|+.+||+.||++|||++|+++
T Consensus 230 -~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 230 -TLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp -CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred -CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 112233467899999999999999999999986
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=1.1e-50 Score=402.76 Aligned_cols=242 Identities=26% Similarity=0.367 Sum_probs=193.9
Q ss_pred cCCCccceeeeecceEEEEEEec----CCcEEEEEeecccc--hhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEE
Q 007668 307 ETLDDDHIIGSGGFGTVYKLAMD----DGNVFALKRIDKLN--EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLL 380 (594)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l 380 (594)
++|+..+.||+|+||+||+|... .++.||||++++.. ......+.+|++++++++|||||++++++.+++..++
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 57889999999999999999753 47889999997532 2223468889999999999999999999999999999
Q ss_pred EEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccC
Q 007668 381 IYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDE 460 (594)
Q Consensus 381 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~ 460 (594)
||||+++|+|.+++.+. +.+++..+..++.||+.||+|||+ .+|+||||||+|||++.++++||+|||+|+.....
T Consensus 104 vmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 179 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKE-VMFTEEDVKFYLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH 179 (304)
T ss_dssp EECCCTTCEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECTTSCEEEESSEEEEC----
T ss_pred EEEcCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHeEEcCCCCEEecccccceeccCC
Confidence 99999999999999764 579999999999999999999995 49999999999999999999999999999865443
Q ss_pred CceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCCCC
Q 007668 461 ESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNC 540 (594)
Q Consensus 461 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 540 (594)
.. .....+||+.|||||++.+..++.++||||+||++|||++|+.||.+.... .......... .
T Consensus 180 ~~-~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~------~~~~~i~~~~-~-------- 243 (304)
T 3ubd_A 180 EK-KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRK------ETMTMILKAK-L-------- 243 (304)
T ss_dssp -C-CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHCC-C--------
T ss_pred Cc-cccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHH------HHHHHHHcCC-C--------
Confidence 32 234567999999999999999999999999999999999999999764322 1111111111 0
Q ss_pred CCCCHHHHHHHHHHHHHcccCCCCCCCCH
Q 007668 541 EGVQSESLDALLAVATQCVSSSPDDRPTM 569 (594)
Q Consensus 541 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~ 569 (594)
..+...+.++.+|+.+||+.||++|||+
T Consensus 244 -~~p~~~s~~~~~li~~~L~~dP~~R~ta 271 (304)
T 3ubd_A 244 -GMPQFLSPEAQSLLRMLFKRNPANRLGA 271 (304)
T ss_dssp -CCCTTSCHHHHHHHHHHTCSSGGGSTTC
T ss_pred -CCCCcCCHHHHHHHHHHcccCHHHCCCC
Confidence 1122344678999999999999999985
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=5.3e-49 Score=392.31 Aligned_cols=248 Identities=24% Similarity=0.395 Sum_probs=188.2
Q ss_pred cCCCccceeeeecceEEEEEEec-CCcEEEEEeecccc-hhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCc-------
Q 007668 307 ETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLN-EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTS------- 377 (594)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~------- 377 (594)
++|+..+.||+|+||+||+|... +|+.||||+++... ....+.+.+|++++++++|||||++++++.+.+.
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 45788899999999999999765 68999999997543 3345679999999999999999999999865442
Q ss_pred -----eEEEEEccCCCchhhhhhhcC--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEee
Q 007668 378 -----KLLIYDFLPGGSLDEALHERS--EQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSD 450 (594)
Q Consensus 378 -----~~lv~e~~~~gsL~~~l~~~~--~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~D 450 (594)
.++||||+++|+|.+++..+. ...++..++.++.||++||+|||+ .+|+||||||+|||++.++.+||+|
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~---~~IiHRDlKp~NILl~~~~~vKl~D 161 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGD 161 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHH---CcCccccCcHHHeEECCCCcEEEcc
Confidence 689999999999999998643 236677889999999999999995 4999999999999999999999999
Q ss_pred cccccccccCCce-----------eeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchH
Q 007668 451 FGLAKLLEDEESH-----------ITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNI 519 (594)
Q Consensus 451 fgl~~~~~~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~ 519 (594)
||+|+........ .....+||+.|||||++.+..++.++|||||||++|||++ ||......
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~----- 233 (299)
T 4g31_A 162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMER----- 233 (299)
T ss_dssp CCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHH-----
T ss_pred CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHH-----
Confidence 9999877543221 1234579999999999999999999999999999999996 77542111
Q ss_pred HHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 520 VGWLNFLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
...... +.....+.......+...+|+.+||+.||++|||+.|+++
T Consensus 234 ~~~~~~---------~~~~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 234 VRTLTD---------VRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp HHHHHH---------HHTTCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHH---------HhcCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 000000 0111111122334456788999999999999999999876
No 16
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=5.9e-46 Score=377.96 Aligned_cols=289 Identities=40% Similarity=0.798 Sum_probs=246.5
Q ss_pred CCCCHHHHHHHhcCCCccceeeeecceEEEEEEecCCcEEEEEeecccch-hhHHHHHHHHHHHhhCCCCeeeeeeeEEe
Q 007668 295 LPYSSKDIIKKLETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNE-GFDRFFERELEILGSIKHRYLVNLRGYCN 373 (594)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~ 373 (594)
..++..++....++|...+.||+|+||.||+|...+++.||||++..... .....+.+|+++++.++||||+++++++.
T Consensus 18 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 97 (326)
T 3uim_A 18 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 97 (326)
T ss_dssp EECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEEC
T ss_pred ceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEe
Confidence 45788999999999999999999999999999988899999999975432 22346899999999999999999999999
Q ss_pred CCCceEEEEEccCCCchhhhhhhcC---CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEee
Q 007668 374 SPTSKLLIYDFLPGGSLDEALHERS---EQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSD 450 (594)
Q Consensus 374 ~~~~~~lv~e~~~~gsL~~~l~~~~---~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~D 450 (594)
.....++||||+++|+|.++++... ..+++..+..++.|++.||+|||+.+.++|+||||||+||+++.++.+||+|
T Consensus 98 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~D 177 (326)
T 3uim_A 98 TPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGD 177 (326)
T ss_dssp CSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECC
T ss_pred cCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEecc
Confidence 9999999999999999999998643 3499999999999999999999976555999999999999999999999999
Q ss_pred cccccccccCCceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhc--ccchHHHHHHHHhc
Q 007668 451 FGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIE--KGLNIVGWLNFLIS 528 (594)
Q Consensus 451 fgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~--~~~~~~~~~~~~~~ 528 (594)
||++...............||+.|+|||++.+..++.++||||||+++|||++|+.||+..... .......|......
T Consensus 178 fg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 257 (326)
T 3uim_A 178 FGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLK 257 (326)
T ss_dssp CSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTS
T ss_pred CccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhh
Confidence 9999887665555555667999999999999889999999999999999999999999754322 33455666666666
Q ss_pred ccccccccCCCCCC-CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccCCC
Q 007668 529 EDRQREIIDPNCEG-VQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVMTP 583 (594)
Q Consensus 529 ~~~~~~~~~~~~~~-~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~~~~ 583 (594)
........+..... ........+.+++.+||+.||++|||++||++.|++.....
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~~~~ 313 (326)
T 3uim_A 258 EKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLAE 313 (326)
T ss_dssp SCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSSCSS
T ss_pred chhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcchhh
Confidence 66666666655543 56778889999999999999999999999999999865543
No 17
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=2e-46 Score=387.80 Aligned_cols=263 Identities=24% Similarity=0.333 Sum_probs=199.9
Q ss_pred cCCCccceeeeecceEEEEEEec-CCcEEEEEeeccc--chhhHHHHHHHHHHHhhCCCCeeeeeeeEEeC------CCc
Q 007668 307 ETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKL--NEGFDRFFERELEILGSIKHRYLVNLRGYCNS------PTS 377 (594)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~------~~~ 377 (594)
++|...+.||+|+||+||+|... +|+.||||+++.. .....+.+.+|+++|++++|||||++++++.. ...
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 46888999999999999999764 6999999999753 23345678899999999999999999998753 367
Q ss_pred eEEEEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeeccccccc
Q 007668 378 KLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLL 457 (594)
Q Consensus 378 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~ 457 (594)
.|+||||++ |+|.+++.. .+.+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++.+
T Consensus 134 ~~ivmE~~~-g~L~~~i~~-~~~l~~~~~~~~~~qil~al~ylH~---~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~ 208 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHS-SQPLTLEHVRYFLYQLLRGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARGL 208 (398)
T ss_dssp EEEEEECCS-EEHHHHHTS-SSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTCCEEECCCTTCBCC
T ss_pred EEEEEeCCC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHH---CcCcCCCcCccccccCCCCCEEEeecceeeec
Confidence 899999995 789999975 4679999999999999999999995 49999999999999999999999999999876
Q ss_pred ccCC---ceeeeeeecccCccCccccccC-CCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccc--
Q 007668 458 EDEE---SHITTIVAGTFGYLAPEYMQSG-RATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDR-- 531 (594)
Q Consensus 458 ~~~~---~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-- 531 (594)
.... .......+||+.|+|||++.+. .++.++||||+||++|||++|+.||.+....+....+...........
T Consensus 209 ~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~ 288 (398)
T 4b99_A 209 CTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQ 288 (398)
T ss_dssp -------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC
T ss_pred ccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhh
Confidence 4332 2223456899999999998775 569999999999999999999999976433221111100000000000
Q ss_pred ------cc---cccCCCCC----CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 532 ------QR---EIIDPNCE----GVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 532 ------~~---~~~~~~~~----~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
.. ..+.+..+ ......+..+.+|+.+||+.||++|||++|+++
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 289 AVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp -----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred hhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 00 00000000 011123467889999999999999999999876
No 18
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=7.8e-46 Score=376.28 Aligned_cols=282 Identities=38% Similarity=0.647 Sum_probs=240.4
Q ss_pred HHHHHHHhcCCCccceeeeecceEEEEEEecCCcEEEEEeecccchhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCce
Q 007668 299 SKDIIKKLETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSK 378 (594)
Q Consensus 299 ~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~ 378 (594)
..++...+++|+..+.||+|+||.||+|...+++.||||++........+.+.+|++++++++||||+++++++.+....
T Consensus 31 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 110 (321)
T 2qkw_B 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEM 110 (321)
T ss_dssp CSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCC
T ss_pred HHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeE
Confidence 34445567899999999999999999999988999999998876666677899999999999999999999999999999
Q ss_pred EEEEEccCCCchhhhhhhcC---CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeeccccc
Q 007668 379 LLIYDFLPGGSLDEALHERS---EQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAK 455 (594)
Q Consensus 379 ~lv~e~~~~gsL~~~l~~~~---~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~ 455 (594)
++||||+++|+|.+++.... ..+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||++.
T Consensus 111 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~ 187 (321)
T 2qkw_B 111 ILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISK 187 (321)
T ss_dssp EEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCSTTEEECTTCCEEECCCTTCE
T ss_pred EEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcC---CCeecCCCCHHHEEECCCCCEEEeeccccc
Confidence 99999999999999997542 358999999999999999999995 499999999999999999999999999998
Q ss_pred ccccCC-ceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhccccccc
Q 007668 456 LLEDEE-SHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQRE 534 (594)
Q Consensus 456 ~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 (594)
...... ........||+.|+|||++.+..++.++||||||+++|||++|+.||.............|............
T Consensus 188 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (321)
T 2qkw_B 188 KGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQ 267 (321)
T ss_dssp ECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCS
T ss_pred ccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHH
Confidence 654322 2223345689999999999989999999999999999999999999987665555566666655555555556
Q ss_pred ccCCCCCC-CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccCCC
Q 007668 535 IIDPNCEG-VQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVMTP 583 (594)
Q Consensus 535 ~~~~~~~~-~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~~~~ 583 (594)
.+++.... ........+.+++.+||+.||++|||++|+++.|+..+...
T Consensus 268 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~~ 317 (321)
T 2qkw_B 268 IVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQ 317 (321)
T ss_dssp SSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred hcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhcc
Confidence 66665543 56788889999999999999999999999999999876543
No 19
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=1.5e-45 Score=377.25 Aligned_cols=196 Identities=26% Similarity=0.364 Sum_probs=168.5
Q ss_pred hcCCCccceeeeecceEEEEEEec----CCcEEEEEeecccchhhHHHHHHHHHHHhhC-CCCeeeeeeeEEeCCCceEE
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMD----DGNVFALKRIDKLNEGFDRFFERELEILGSI-KHRYLVNLRGYCNSPTSKLL 380 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~l 380 (594)
.++|+..+.||+|+||+||+|..+ .++.||+|++..... ...+.+|++++..+ +||||+++++++.+.+..++
T Consensus 20 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~--~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~l 97 (361)
T 4f9c_A 20 SNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSH--PIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVI 97 (361)
T ss_dssp GGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSC--HHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEE
T ss_pred cCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccC--HHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEE
Confidence 467999999999999999999753 467899999876433 45688999999998 69999999999999999999
Q ss_pred EEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCC-CcEEEeeccccccccc
Q 007668 381 IYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGN-LEARVSDFGLAKLLED 459 (594)
Q Consensus 381 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~-~~~~l~Dfgl~~~~~~ 459 (594)
||||+++|+|.+++. .+++..+..++.||+.||+|||+ .+|+||||||+|||++.+ +.+||+|||+|+....
T Consensus 98 vmE~~~g~~L~~~~~----~l~~~~~~~~~~qll~al~ylH~---~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~ 170 (361)
T 4f9c_A 98 AMPYLEHESFLDILN----SLSFQEVREYMLNLFKALKRIHQ---FGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHD 170 (361)
T ss_dssp EEECCCCCCHHHHHT----TCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEECCCTTCEECTT
T ss_pred EEeCCCcccHHHHHc----CCCHHHHHHHHHHHHHHHHHHHH---CCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCC
Confidence 999999999999984 48999999999999999999995 499999999999999876 7999999999986543
Q ss_pred CCc---------------------------eeeeeeecccCccCccccccC-CCCccchhhhHHHHHHHHHhCCCCCCc
Q 007668 460 EES---------------------------HITTIVAGTFGYLAPEYMQSG-RATEKTDVYSFGVLVLEVLSGKRPTDA 510 (594)
Q Consensus 460 ~~~---------------------------~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~elltg~~p~~~ 510 (594)
... ......+||+.|+|||++.+. .++.++||||+||++|||++|+.||..
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~ 249 (361)
T 4f9c_A 171 TKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYK 249 (361)
T ss_dssp CSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSC
T ss_pred ccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCC
Confidence 211 112345799999999999775 589999999999999999999999854
No 20
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=1.1e-44 Score=393.01 Aligned_cols=252 Identities=26% Similarity=0.412 Sum_probs=211.0
Q ss_pred hcCCCccceeeeecceEEEEEEec-CCcEEEEEeecccchhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEEEEc
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDF 384 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~ 384 (594)
.++|++.+.||+|+||+||+|..+ +|+.||+|++........+.+.+|+++|+.++|||||++++++.+....++||||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~ 235 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 235 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence 468899999999999999999765 6899999999876666677899999999999999999999999999999999999
Q ss_pred cCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCC--CcEEEeecccccccccCCc
Q 007668 385 LPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGN--LEARVSDFGLAKLLEDEES 462 (594)
Q Consensus 385 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~--~~~~l~Dfgl~~~~~~~~~ 462 (594)
+++|+|.+++..+...+++..+..++.||+.||+|||+ .+|+||||||+|||++.+ +.+||+|||+++.+....
T Consensus 236 ~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~---~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~- 311 (573)
T 3uto_A 236 MSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHE---NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ- 311 (573)
T ss_dssp CCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTS-
T ss_pred cCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCChhhccccCCCCCCEEEeeccceeEccCCC-
Confidence 99999999998766789999999999999999999995 499999999999999854 899999999999876543
Q ss_pred eeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCCCCCC
Q 007668 463 HITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEG 542 (594)
Q Consensus 463 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 542 (594)
.....+||+.|+|||++.+..++.++||||+||++|||++|+.||.+....+ .......... .++. .
T Consensus 312 -~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~------~~~~i~~~~~---~~~~---~ 378 (573)
T 3uto_A 312 -SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE------TLRNVKSCDW---NMDD---S 378 (573)
T ss_dssp -EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH------HHHHHHTTCC---CCCS---G
T ss_pred -ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH------HHHHHHhCCC---CCCc---c
Confidence 2345679999999999999999999999999999999999999997643221 1111111100 0000 0
Q ss_pred CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 543 VQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 543 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
.....+..+.+|+.+||+.||++|||++|+++
T Consensus 379 ~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 379 AFSGISEDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp GGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred cccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 11223467889999999999999999999876
No 21
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=6.9e-45 Score=391.84 Aligned_cols=249 Identities=23% Similarity=0.346 Sum_probs=200.2
Q ss_pred hcCCCccceeeeecceEEEEEEec-CCcEEEEEeecccc---hhhHHHHH---HHHHHHhhCCCCeeeeeeeEEeCCCce
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLN---EGFDRFFE---RELEILGSIKHRYLVNLRGYCNSPTSK 378 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~---~E~~~l~~l~h~niv~l~g~~~~~~~~ 378 (594)
.++|+..++||+|+||+||+|... +|+.||+|++.+.. ......+. .++.+++.++|||||++++++.+....
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 467889999999999999999765 68999999997521 11222333 346667788999999999999999999
Q ss_pred EEEEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccc
Q 007668 379 LLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLE 458 (594)
Q Consensus 379 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~ 458 (594)
|+||||++||+|.+++... +.+++..+..++.||+.||+||| +.+||||||||+|||++.+|++||+|||+|+.+.
T Consensus 268 ylVmEy~~GGdL~~~l~~~-~~l~E~~a~~y~~qIl~aL~yLH---~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~ 343 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQH-GVFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFS 343 (689)
T ss_dssp EEEECCCCSCBHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred EEEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHeEEeCCCCEEecccceeeecC
Confidence 9999999999999999864 56999999999999999999999 5599999999999999999999999999998765
Q ss_pred cCCceeeeeeecccCccCcccccc-CCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccC
Q 007668 459 DEESHITTIVAGTFGYLAPEYMQS-GRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIID 537 (594)
Q Consensus 459 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 537 (594)
... ....+||+.|||||++.. ..|+.++|+||+||++|||++|+.||......+. ...........
T Consensus 344 ~~~---~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~---~~i~~~i~~~~------- 410 (689)
T 3v5w_A 344 KKK---PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK---HEIDRMTLTMA------- 410 (689)
T ss_dssp SCC---CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCH---HHHHHHHHHCC-------
T ss_pred CCC---CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH---HHHHHhhcCCC-------
Confidence 433 345689999999999964 5799999999999999999999999976432211 11111111111
Q ss_pred CCCCCCCHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 007668 538 PNCEGVQSESLDALLAVATQCVSSSPDDRPT-----MHRVVQ 574 (594)
Q Consensus 538 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~ev~~ 574 (594)
. ..+...+.++.+|+.+||+.||++|++ ++||++
T Consensus 411 ~---~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 411 V---ELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp C---CCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred C---CCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 0 112234567899999999999999998 677763
No 22
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.7e-43 Score=357.22 Aligned_cols=258 Identities=25% Similarity=0.464 Sum_probs=212.3
Q ss_pred hcCCCccceeeeecceEEEEEEec-CCcEEEEEeecccchhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEEEEc
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDF 384 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~ 384 (594)
.++|...+.||+|+||+||+|... +++.||+|++........+.+.+|++++++++||||+++++++.+....++||||
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 88 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY 88 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence 356788899999999999999875 5899999999877777778899999999999999999999999999999999999
Q ss_pred cCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccCCcee
Q 007668 385 LPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHI 464 (594)
Q Consensus 385 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~~~~ 464 (594)
+++|+|.+++......+++..+..++.|+++||+|||+ .+|+||||||+||+++.++.+||+|||++..........
T Consensus 89 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 165 (310)
T 3s95_A 89 IKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHS---MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQP 165 (310)
T ss_dssp CTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEECTTSCEEECCCTTCEECC------
T ss_pred cCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCcCeEEECCCCCEEEeecccceecccccccc
Confidence 99999999998877789999999999999999999995 499999999999999999999999999998765433211
Q ss_pred -------------eeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccc
Q 007668 465 -------------TTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDR 531 (594)
Q Consensus 465 -------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 531 (594)
.....||+.|+|||++.+..++.++||||||+++|||++|..|+.............. ....
T Consensus 166 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~-~~~~---- 240 (310)
T 3s95_A 166 EGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNV-RGFL---- 240 (310)
T ss_dssp --------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCH-HHHH----
T ss_pred cccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhh-hccc----
Confidence 1145799999999999999999999999999999999999999865432211100000 0000
Q ss_pred cccccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 007668 532 QREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESE 579 (594)
Q Consensus 532 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~ 579 (594)
..... ...+..+.+++.+||+.||++|||++|+++.|++.
T Consensus 241 -~~~~~-------~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l 280 (310)
T 3s95_A 241 -DRYCP-------PNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETL 280 (310)
T ss_dssp -HHTCC-------TTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -cccCC-------CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 00011 12224688999999999999999999999998874
No 23
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=1.8e-43 Score=359.26 Aligned_cols=261 Identities=27% Similarity=0.421 Sum_probs=212.0
Q ss_pred cCCCccceeeeecceEEEEEEec----CCcEEEEEeeccc-chhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEE
Q 007668 307 ETLDDDHIIGSGGFGTVYKLAMD----DGNVFALKRIDKL-NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLI 381 (594)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv 381 (594)
++|...+.||+|+||.||+|... .+..||||+++.. .....+.+.+|++++++++||||+++++++.+....++|
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 128 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV 128 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEE
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEE
Confidence 56778899999999999999874 4556999999764 444567799999999999999999999999999999999
Q ss_pred EEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccCC
Q 007668 382 YDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEE 461 (594)
Q Consensus 382 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~ 461 (594)
|||+++|+|.++++.....+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.++|+|||+++......
T Consensus 129 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 205 (325)
T 3kul_A 129 TEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSD---LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDP 205 (325)
T ss_dssp EECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCSSCEECC---
T ss_pred eeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCcceEEECCCCCEEECCCCcccccccCc
Confidence 99999999999998776789999999999999999999995 499999999999999999999999999998765433
Q ss_pred ce--eeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHHHHhcccccccccCC
Q 007668 462 SH--ITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDP 538 (594)
Q Consensus 462 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 538 (594)
.. ......+|+.|+|||++.+..++.++||||||+++|||++ |..||....... ......... .
T Consensus 206 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~------~~~~~~~~~--~----- 272 (325)
T 3kul_A 206 DAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRD------VISSVEEGY--R----- 272 (325)
T ss_dssp -CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHH------HHHHHHTTC--C-----
T ss_pred cceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHH------HHHHHHcCC--C-----
Confidence 22 2223456788999999998999999999999999999999 999986543221 111111110 0
Q ss_pred CCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccCCCCC
Q 007668 539 NCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVMTPCP 585 (594)
Q Consensus 539 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~~~~~~ 585 (594)
...+...+..+.+++.+||+.||++|||++||++.|+.....+..
T Consensus 273 --~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~~ 317 (325)
T 3kul_A 273 --LPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPES 317 (325)
T ss_dssp --CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC-
T ss_pred --CCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCccc
Confidence 111223446799999999999999999999999999988765543
No 24
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=2.5e-43 Score=355.49 Aligned_cols=264 Identities=28% Similarity=0.448 Sum_probs=204.6
Q ss_pred HHHhcCCCccceeeeecceEEEEEEecCCcEEEEEeecccc--hhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEE
Q 007668 303 IKKLETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLN--EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLL 380 (594)
Q Consensus 303 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l 380 (594)
.....+|+..+.||+|+||+||+|.. +++.||||++.... ....+.+.+|++++++++||||+++++++.+....++
T Consensus 33 ~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 111 (309)
T 3p86_A 33 DIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSI 111 (309)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEE
T ss_pred cCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEE
Confidence 33466888999999999999999977 58889999987533 3345678999999999999999999999999999999
Q ss_pred EEEccCCCchhhhhhhcCC--CCCHHHHHHHHHHHHHHHHHhhhcCCCC--eeeCCCCCCCeEecCCCcEEEeecccccc
Q 007668 381 IYDFLPGGSLDEALHERSE--QLDWDARLNIIMGAAKGLAYLHHDCSPR--IIHRDIKSSNILLDGNLEARVSDFGLAKL 456 (594)
Q Consensus 381 v~e~~~~gsL~~~l~~~~~--~l~~~~~~~i~~~ia~~L~~LH~~~~~~--ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~ 456 (594)
||||+++|+|.+++..... .+++..+..++.||+.||+|||+. + |+||||||+||+++.++.+||+|||+++.
T Consensus 112 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~ 188 (309)
T 3p86_A 112 VTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL 188 (309)
T ss_dssp EEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC----
T ss_pred EEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCCCCcc
Confidence 9999999999999976432 389999999999999999999954 7 99999999999999999999999999975
Q ss_pred cccCCceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhccccccccc
Q 007668 457 LEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREII 536 (594)
Q Consensus 457 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 536 (594)
..... .......||+.|+|||++.+..++.++||||||+++|||++|+.||....... ......... ..
T Consensus 189 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~------~~~~~~~~~-~~--- 257 (309)
T 3p86_A 189 KASTF-LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQ------VVAAVGFKC-KR--- 257 (309)
T ss_dssp --------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHH------HHHHHHHSC-CC---
T ss_pred ccccc-cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHhcC-CC---
Confidence 44322 22334578999999999999999999999999999999999999997643221 111110000 00
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccCCCCC
Q 007668 537 DPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVMTPCP 585 (594)
Q Consensus 537 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~~~~~~ 585 (594)
...+...+..+.+++.+||+.||++|||++++++.|+..+....|
T Consensus 258 ----~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~p 302 (309)
T 3p86_A 258 ----LEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVP 302 (309)
T ss_dssp ----CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC----
T ss_pred ----CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCCC
Confidence 112233446789999999999999999999999999988765444
No 25
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=3e-43 Score=347.63 Aligned_cols=257 Identities=24% Similarity=0.368 Sum_probs=214.7
Q ss_pred hcCCCccceeeeecceEEEEEEecCCcEEEEEeecccchhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEEEEcc
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDFL 385 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~ 385 (594)
.++|+..+.||+|+||.||+|...++..||+|++..... ..+.+.+|++++.+++||||+++++++.+....++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI 85 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence 457888899999999999999999888999999976443 3467899999999999999999999999999999999999
Q ss_pred CCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccCCceee
Q 007668 386 PGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHIT 465 (594)
Q Consensus 386 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~~~~~ 465 (594)
++++|.+++......+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.++|+|||++...........
T Consensus 86 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 162 (268)
T 3sxs_A 86 SNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLES---HQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSS 162 (268)
T ss_dssp TTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHH---TTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEEC
T ss_pred CCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCcCcceEEECCCCCEEEccCccceecchhhhhcc
Confidence 9999999998776679999999999999999999995 4999999999999999999999999999987765544434
Q ss_pred eeeecccCccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHHHHhcccccccccCCCCCCCC
Q 007668 466 TIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQ 544 (594)
Q Consensus 466 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (594)
....+|+.|+|||.+.+..++.++||||+|+++|||++ |+.||....... ......... ... .+
T Consensus 163 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~------~~~~~~~~~---~~~------~~ 227 (268)
T 3sxs_A 163 VGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSE------VVLKVSQGH---RLY------RP 227 (268)
T ss_dssp CSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHH------HHHHHHTTC---CCC------CC
T ss_pred cCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHH------HHHHHHcCC---CCC------CC
Confidence 44556788999999998889999999999999999999 999987543221 111111110 111 11
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccC
Q 007668 545 SESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVM 581 (594)
Q Consensus 545 ~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~~ 581 (594)
...+..+.+++.+||+.||++|||++|+++.|+....
T Consensus 228 ~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (268)
T 3sxs_A 228 HLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLRE 264 (268)
T ss_dssp TTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC
T ss_pred CcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhh
Confidence 2234678999999999999999999999999987643
No 26
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.3e-43 Score=350.45 Aligned_cols=257 Identities=27% Similarity=0.411 Sum_probs=213.6
Q ss_pred hcCCCccceeeeecceEEEEEEecCCcEEEEEeecccchhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEEEEcc
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDFL 385 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~ 385 (594)
.++|+..+.||+|+||.||+|...+++.||+|++...... .+.+.+|++++++++||||+++++++.+....++||||+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS-EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM 87 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBC-HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhhceeeheecCCCccEEEEEEecCCCeEEEEEecccccC-HHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeC
Confidence 3578888999999999999999988999999999864432 467899999999999999999999999999999999999
Q ss_pred CCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccCCceee
Q 007668 386 PGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHIT 465 (594)
Q Consensus 386 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~~~~~ 465 (594)
++++|.+++......+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.++|+|||++...........
T Consensus 88 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 164 (269)
T 4hcu_A 88 EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 164 (269)
T ss_dssp TTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHST
T ss_pred CCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHh---CCeecCCcchheEEEcCCCCEEeccccccccccccccccc
Confidence 9999999998777779999999999999999999995 4999999999999999999999999999986654332223
Q ss_pred eeeecccCccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHHHHhcccccccccCCCCCCCC
Q 007668 466 TIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQ 544 (594)
Q Consensus 466 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (594)
....+|+.|+|||.+.+..++.++||||+|+++|||++ |+.||....... ......... . . ..+
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~------~~~~~~~~~--~-~------~~~ 229 (269)
T 4hcu_A 165 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE------VVEDISTGF--R-L------YKP 229 (269)
T ss_dssp TSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH------HHHHHHTTC--C-C------CCC
T ss_pred cCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHH------HHHHHhcCc--c-C------CCC
Confidence 33456788999999999999999999999999999999 999987643221 111111110 0 0 111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccC
Q 007668 545 SESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVM 581 (594)
Q Consensus 545 ~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~~ 581 (594)
...+..+.+++.+||+.||++|||++|+++.|++...
T Consensus 230 ~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~ 266 (269)
T 4hcu_A 230 RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 266 (269)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHH
Confidence 2234678999999999999999999999999987643
No 27
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=6e-42 Score=345.32 Aligned_cols=279 Identities=33% Similarity=0.592 Sum_probs=229.6
Q ss_pred CCCCHHHHHHHhcCCCcc------ceeeeecceEEEEEEecCCcEEEEEeeccc----chhhHHHHHHHHHHHhhCCCCe
Q 007668 295 LPYSSKDIIKKLETLDDD------HIIGSGGFGTVYKLAMDDGNVFALKRIDKL----NEGFDRFFERELEILGSIKHRY 364 (594)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~------~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~h~n 364 (594)
..|+..++.+++.+|... +.||+|+||.||+|.. +++.||||++... .....+.+.+|++++++++|||
T Consensus 13 ~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 91 (307)
T 2nru_A 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91 (307)
T ss_dssp EECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTT
T ss_pred CcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCC
Confidence 468899999999999887 8999999999999987 5889999998652 2334577999999999999999
Q ss_pred eeeeeeEEeCCCceEEEEEccCCCchhhhhhhc--CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecC
Q 007668 365 LVNLRGYCNSPTSKLLIYDFLPGGSLDEALHER--SEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDG 442 (594)
Q Consensus 365 iv~l~g~~~~~~~~~lv~e~~~~gsL~~~l~~~--~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~ 442 (594)
|+++++++.+....++||||+++++|.+++... ...+++..+..++.||+.||+|||+ .+|+||||||+||+++.
T Consensus 92 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dlkp~Nili~~ 168 (307)
T 2nru_A 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHE---NHHIHRDIKSANILLDE 168 (307)
T ss_dssp BCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECT
T ss_pred eEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecCCCCHHHEEEcC
Confidence 999999999999999999999999999998743 3469999999999999999999995 49999999999999999
Q ss_pred CCcEEEeecccccccccCCce-eeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHH
Q 007668 443 NLEARVSDFGLAKLLEDEESH-ITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVG 521 (594)
Q Consensus 443 ~~~~~l~Dfgl~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~ 521 (594)
++.++|+|||++......... ......||+.|+|||.+.+ .++.++||||||+++|+|++|..||........ ...
T Consensus 169 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~--~~~ 245 (307)
T 2nru_A 169 AFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQL--LLD 245 (307)
T ss_dssp TCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSB--TTH
T ss_pred CCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHH--HHH
Confidence 999999999999876543322 2234568999999998864 588999999999999999999999976433221 111
Q ss_pred HHHHHh-cccccccccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccc
Q 007668 522 WLNFLI-SEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEV 580 (594)
Q Consensus 522 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~ 580 (594)
+..... ........+++............+.+++.+||+.||++|||+++|++.|+++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~ 305 (307)
T 2nru_A 246 IKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT 305 (307)
T ss_dssp HHHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred HHHHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence 111111 12223344555556667788889999999999999999999999999998753
No 28
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1.9e-42 Score=347.12 Aligned_cols=250 Identities=22% Similarity=0.369 Sum_probs=208.5
Q ss_pred hcCCCccceeeeecceEEEEEEe-cCCcEEEEEeecccchhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEEEEc
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAM-DDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDF 384 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~ 384 (594)
.++|+..+.||+|+||+||+|.. .+++.||+|++........+.+.+|+.++++++||||+++++++......++||||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 45789999999999999999975 56899999999765555567899999999999999999999999999999999999
Q ss_pred cCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccCCcee
Q 007668 385 LPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHI 464 (594)
Q Consensus 385 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~~~~ 464 (594)
+++|+|.+++... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++.........
T Consensus 99 ~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~- 172 (297)
T 3fxz_A 99 LAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK- 172 (297)
T ss_dssp CTTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCC-
T ss_pred CCCCCHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHh---CCceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccc-
Confidence 9999999999763 58999999999999999999995 49999999999999999999999999999876544332
Q ss_pred eeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCCCCCCCC
Q 007668 465 TTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQ 544 (594)
Q Consensus 465 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (594)
.....||+.|+|||++.+..++.++||||+|+++|||++|+.||........ ......... .. . ..+
T Consensus 173 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~------~~~~~~~~~-~~-----~-~~~ 239 (297)
T 3fxz_A 173 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA------LYLIATNGT-PE-----L-QNP 239 (297)
T ss_dssp BCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH------HHHHHHHCS-CC-----C-SCG
T ss_pred cCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH------HHHHHhCCC-CC-----C-CCc
Confidence 3445799999999999999999999999999999999999999965432211 111111110 00 0 112
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 545 SESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 545 ~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
...+..+.+++.+||+.||++|||++|+++
T Consensus 240 ~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 240 EKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp GGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred cccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 334567899999999999999999999986
No 29
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=5.5e-43 Score=361.97 Aligned_cols=258 Identities=26% Similarity=0.423 Sum_probs=210.6
Q ss_pred hcCCCccceeeeecceEEEEEEec--------CCcEEEEEeeccc-chhhHHHHHHHHHHHhhC-CCCeeeeeeeEEeCC
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMD--------DGNVFALKRIDKL-NEGFDRFFERELEILGSI-KHRYLVNLRGYCNSP 375 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~ 375 (594)
.++|...+.||+|+||.||+|... ++..||||+++.. .....+.+.+|+++++++ +||||+++++++.+.
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 467888899999999999999753 3567999999754 333456799999999999 899999999999999
Q ss_pred CceEEEEEccCCCchhhhhhhcC---------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEe
Q 007668 376 TSKLLIYDFLPGGSLDEALHERS---------------EQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILL 440 (594)
Q Consensus 376 ~~~~lv~e~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll 440 (594)
...++||||+++|+|.+++.... ..+++..+..++.||+.||+|||+ .+|+||||||+|||+
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCeeccccchhhEEE
Confidence 99999999999999999998643 348999999999999999999995 499999999999999
Q ss_pred cCCCcEEEeecccccccccCCce-eeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCCcchhcccch
Q 007668 441 DGNLEARVSDFGLAKLLEDEESH-ITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLN 518 (594)
Q Consensus 441 ~~~~~~~l~Dfgl~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~ 518 (594)
+.++.+||+|||+++........ ......+|+.|+|||++.+..++.++||||||+++|||++ |+.||......+
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~--- 313 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--- 313 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---
T ss_pred CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHH---
Confidence 99999999999999866543321 1223456889999999999999999999999999999999 999987643221
Q ss_pred HHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccC
Q 007668 519 IVGWLNFLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVM 581 (594)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~~ 581 (594)
......... ....+...+..+.+++.+||+.||++|||+.|+++.|++++.
T Consensus 314 ---~~~~~~~~~---------~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~ 364 (370)
T 2psq_A 314 ---LFKLLKEGH---------RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 364 (370)
T ss_dssp ---HHHHHHTTC---------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---HHHHHhcCC---------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 111111111 011222344679999999999999999999999999998654
No 30
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=3.7e-43 Score=363.55 Aligned_cols=259 Identities=27% Similarity=0.454 Sum_probs=201.3
Q ss_pred hcCCCccceeeeecceEEEEEEec----CCcEEEEEeeccc-chhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEE
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMD----DGNVFALKRIDKL-NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLL 380 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l 380 (594)
..+|+..+.||+|+||.||+|... ++..||||+++.. .....+.+.+|++++++++||||+++++++.+....++
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 123 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence 357889999999999999999865 5778999999753 34445679999999999999999999999999999999
Q ss_pred EEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccC
Q 007668 381 IYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDE 460 (594)
Q Consensus 381 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~ 460 (594)
||||+++|+|.++++.....+++..+..++.||++||+|||+ .+|+||||||+|||++.++.+||+|||+++.....
T Consensus 124 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 200 (373)
T 2qol_A 124 VTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDD 200 (373)
T ss_dssp EEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred EEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCcceEEEcCCCCEEECcCccccccccC
Confidence 999999999999998777789999999999999999999995 49999999999999999999999999999876543
Q ss_pred Ccee--eeeeecccCccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHHHHhcccccccccC
Q 007668 461 ESHI--TTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLNFLISEDRQREIID 537 (594)
Q Consensus 461 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 537 (594)
.... .....+++.|+|||++.+..++.++||||||+++|||++ |+.||......+ .......... .
T Consensus 201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~------~~~~i~~~~~--~--- 269 (373)
T 2qol_A 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD------VIKAVDEGYR--L--- 269 (373)
T ss_dssp -------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHH------HHHHHHTTEE--C---
T ss_pred CccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH------HHHHHHcCCC--C---
Confidence 3221 122345778999999999999999999999999999998 999986542211 1111111110 0
Q ss_pred CCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccCC
Q 007668 538 PNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVMT 582 (594)
Q Consensus 538 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~~~ 582 (594)
+ .+...+..+.+++.+||+.||++||++.+|++.|++....
T Consensus 270 ~----~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~ 310 (373)
T 2qol_A 270 P----PPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310 (373)
T ss_dssp C----CCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred C----CCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhC
Confidence 0 1123446799999999999999999999999999886543
No 31
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=5.6e-42 Score=347.61 Aligned_cols=261 Identities=23% Similarity=0.344 Sum_probs=215.0
Q ss_pred CCCCHHHHHHHhcC----------CCccceeeeecceEEEEEEec-CCcEEEEEeecccchhhHHHHHHHHHHHhhCCCC
Q 007668 295 LPYSSKDIIKKLET----------LDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNEGFDRFFERELEILGSIKHR 363 (594)
Q Consensus 295 ~~~~~~~~~~~~~~----------~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 363 (594)
.+++.+++..+++. |+..+.||+|+||.||+|... +|+.||||++........+.+.+|+.++++++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 46788888888764 566779999999999999876 7999999999866655667899999999999999
Q ss_pred eeeeeeeEEeCCCceEEEEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCC
Q 007668 364 YLVNLRGYCNSPTSKLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGN 443 (594)
Q Consensus 364 niv~l~g~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~ 443 (594)
||+++++++......++||||+++++|.+++.. ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.+
T Consensus 103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~ 177 (321)
T 2c30_A 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ--VRLNEEQIATVCEAVLQALAYLHA---QGVIHRDIKSDSILLTLD 177 (321)
T ss_dssp TBCCEEEEEEETTEEEEEECCCCSCBHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTT
T ss_pred CcceEEEEEEECCEEEEEEecCCCCCHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCC
Confidence 999999999999999999999999999999864 469999999999999999999995 499999999999999999
Q ss_pred CcEEEeecccccccccCCceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHH
Q 007668 444 LEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWL 523 (594)
Q Consensus 444 ~~~~l~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~ 523 (594)
+.+||+|||++......... .....||+.|+|||++.+..++.++||||||+++|||++|+.||....... ..
T Consensus 178 ~~~kl~Dfg~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~------~~ 250 (321)
T 2c30_A 178 GRVKLSDFGFCAQISKDVPK-RKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQ------AM 250 (321)
T ss_dssp CCEEECCCTTCEECCSSSCC-BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH------HH
T ss_pred CcEEEeeeeeeeecccCccc-cccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH------HH
Confidence 99999999999876543322 234579999999999999999999999999999999999999997532211 11
Q ss_pred HHHhcccccccccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 524 NFLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
...... ..+... .....+..+.+++.+||+.||++|||++|+++
T Consensus 251 ~~~~~~------~~~~~~-~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 294 (321)
T 2c30_A 251 KRLRDS------PPPKLK-NSHKVSPVLRDFLERMLVRDPQERATAQELLD 294 (321)
T ss_dssp HHHHHS------SCCCCT-TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHHhcC------CCCCcC-ccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 111111 111111 11233467899999999999999999999986
No 32
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=1.9e-43 Score=354.20 Aligned_cols=265 Identities=28% Similarity=0.437 Sum_probs=209.0
Q ss_pred hcCCCccceeeeecceEEEEEEe-----cCCcEEEEEeecccchhhHHHHHHHHHHHhhCCCCeeeeeeeEEeC--CCce
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAM-----DDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNS--PTSK 378 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~--~~~~ 378 (594)
.++|+..+.||+|+||.||++.+ .+++.||||++........+.+.+|++++.+++||||+++++++.. ....
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 88 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence 35788889999999999999974 3688999999987776667789999999999999999999999854 3558
Q ss_pred EEEEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccc
Q 007668 379 LLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLE 458 (594)
Q Consensus 379 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~ 458 (594)
++||||+++|+|.+++......+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++....
T Consensus 89 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~ 165 (295)
T 3ugc_A 89 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKVLP 165 (295)
T ss_dssp EEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCCSCC---
T ss_pred EEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHhhEEEcCCCeEEEccCccccccc
Confidence 99999999999999998766679999999999999999999995 499999999999999999999999999998765
Q ss_pred cCCce--eeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhccc---------chHHHHHHHHh
Q 007668 459 DEESH--ITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKG---------LNIVGWLNFLI 527 (594)
Q Consensus 459 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~---------~~~~~~~~~~~ 527 (594)
..... ......++..|+|||.+.+..++.++||||||+++|||++|..|+........ ...........
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (295)
T 3ugc_A 166 QDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELL 245 (295)
T ss_dssp ----------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHH
T ss_pred CCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHH
Confidence 43321 12234577889999999999999999999999999999999999875432200 00000001111
Q ss_pred cccccccccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccC
Q 007668 528 SEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVM 581 (594)
Q Consensus 528 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~~ 581 (594)
... .....+...+..+.+++.+||+.||++|||++|+++.|++...
T Consensus 246 ~~~--------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~ 291 (295)
T 3ugc_A 246 KNN--------GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 291 (295)
T ss_dssp HTT--------CCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hcc--------CcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence 111 1111223445779999999999999999999999999987654
No 33
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=5.4e-43 Score=355.40 Aligned_cols=265 Identities=28% Similarity=0.372 Sum_probs=206.4
Q ss_pred hcCCCccceeeeecceEEEEEEecCCcEEEEEeecccchhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCc----eEEE
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTS----KLLI 381 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~----~~lv 381 (594)
.++|+..+.||+|+||+||+|... ++.||||++..... ....+.+|+.++.+++||||+++++++.+... .++|
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv 100 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDK-QSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLI 100 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCch-HHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEE
Confidence 467888999999999999999876 78999999975433 24456678999999999999999999977543 6899
Q ss_pred EEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcC-------CCCeeeCCCCCCCeEecCCCcEEEeecccc
Q 007668 382 YDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDC-------SPRIIHRDIKSSNILLDGNLEARVSDFGLA 454 (594)
Q Consensus 382 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~-------~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~ 454 (594)
|||+++|+|.++++. ..+++..+..++.|++.||+|||+.+ +++|+||||||+|||++.++.+||+|||++
T Consensus 101 ~e~~~~g~L~~~l~~--~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a 178 (322)
T 3soc_A 101 TAFHEKGSLSDFLKA--NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLA 178 (322)
T ss_dssp EECCTTCBHHHHHHH--CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred EecCCCCCHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcc
Confidence 999999999999976 34999999999999999999999420 129999999999999999999999999999
Q ss_pred cccccCCce-eeeeeecccCccCccccccC-----CCCccchhhhHHHHHHHHHhCCCCCCcchhcccch----------
Q 007668 455 KLLEDEESH-ITTIVAGTFGYLAPEYMQSG-----RATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLN---------- 518 (594)
Q Consensus 455 ~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~-----~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~---------- 518 (594)
+........ ......||+.|+|||++.+. .++.++||||||+++|||++|+.||..........
T Consensus 179 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~ 258 (322)
T 3soc_A 179 LKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPS 258 (322)
T ss_dssp EEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCC
T ss_pred cccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCc
Confidence 876543322 22335789999999998863 45678899999999999999999997643322111
Q ss_pred HHHHHHHHhcccccccccCCCCCC--CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 007668 519 IVGWLNFLISEDRQREIIDPNCEG--VQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESE 579 (594)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~ 579 (594)
...+...... . ...+.... ........+.+++.+||+.||++|||++||++.|++.
T Consensus 259 ~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l 316 (322)
T 3soc_A 259 LEDMQEVVVH-K----KKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQM 316 (322)
T ss_dssp HHHHHHHHTT-S----CCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred hhhhhhhhhc-c----cCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 1111111111 1 11111111 1234566799999999999999999999999999875
No 34
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.7e-43 Score=358.17 Aligned_cols=249 Identities=22% Similarity=0.373 Sum_probs=197.1
Q ss_pred hcCCCccceeeeecceEEEEEEe-cCCcEEEEEeecccc-hhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEEEE
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAM-DDGNVFALKRIDKLN-EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYD 383 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e 383 (594)
.++|...+.||+|+||+||+|.. .+|+.||||++.... ......+.+|++++++++||||+++++++.+....++|||
T Consensus 9 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E 88 (347)
T 3zgw_A 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLE 88 (347)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEe
Confidence 46788899999999999999976 578999999987533 2234568899999999999999999999999999999999
Q ss_pred ccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccCCce
Q 007668 384 FLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESH 463 (594)
Q Consensus 384 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~~~ 463 (594)
|+++|+|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+||++++++.+||+|||++.........
T Consensus 89 ~~~gg~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~ 164 (347)
T 3zgw_A 89 YCPGGELFDYIISQ-DRLSEEETRVVFRQIVSAVAYVHS---QGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDY 164 (347)
T ss_dssp CCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBC-------
T ss_pred CCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCccHHHEEEcCCCCEEEEeccCcccccCCCCc
Confidence 99999999999764 469999999999999999999995 49999999999999999999999999999876554444
Q ss_pred eeeeeecccCccCccccccCCC-CccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCCCCCC
Q 007668 464 ITTIVAGTFGYLAPEYMQSGRA-TEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEG 542 (594)
Q Consensus 464 ~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 542 (594)
......||+.|+|||++.+..+ +.++||||+|+++|||++|..||+..... ........... .
T Consensus 165 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~------~~~~~i~~~~~----------~ 228 (347)
T 3zgw_A 165 HLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVM------ALYKKIMRGKY----------D 228 (347)
T ss_dssp -------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHTCC----------C
T ss_pred cccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHH------HHHHHHHcCCC----------C
Confidence 4455679999999999988775 89999999999999999999999764322 11111111110 1
Q ss_pred CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 543 VQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 543 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
.+...+..+.+++.+||+.||++|||++|+++
T Consensus 229 ~p~~~s~~~~~li~~~L~~dP~~Rps~~eil~ 260 (347)
T 3zgw_A 229 VPKWLSPSSILLLQQMLQVDPKKRISMKNLLN 260 (347)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCCCCCHHHHHHHHHHcccCHhHCcCHHHHhc
Confidence 11223466889999999999999999999986
No 35
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=3.6e-43 Score=364.52 Aligned_cols=257 Identities=26% Similarity=0.411 Sum_probs=210.1
Q ss_pred hcCCCccceeeeecceEEEEEEec-CCcEEEEEeecccc-hhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEEEE
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLN-EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYD 383 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e 383 (594)
.++|...+.||+|+||.||+|... +++.||||.++... ....+.+.+|++++++++||||+++++++.+....++|||
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 192 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME 192 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence 457888899999999999999886 78999999987542 3334568899999999999999999999999999999999
Q ss_pred ccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccCCce
Q 007668 384 FLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESH 463 (594)
Q Consensus 384 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~~~ 463 (594)
|+++|+|.++++.....+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++........
T Consensus 193 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~ 269 (377)
T 3cbl_A 193 LVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLES---KCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYA 269 (377)
T ss_dssp CCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEE
T ss_pred cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCcee
Confidence 999999999998776779999999999999999999995 49999999999999999999999999999865432211
Q ss_pred ee-eeeecccCccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHHHHhcccccccccCCCCC
Q 007668 464 IT-TIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCE 541 (594)
Q Consensus 464 ~~-~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (594)
.. ....+++.|+|||.+.++.++.++||||||+++|||++ |..||....... .......... .
T Consensus 270 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~------~~~~~~~~~~---------~ 334 (377)
T 3cbl_A 270 ASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQ------TREFVEKGGR---------L 334 (377)
T ss_dssp CCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHH------HHHHHHTTCC---------C
T ss_pred ecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH------HHHHHHcCCC---------C
Confidence 11 12235778999999998899999999999999999998 999987643221 1111111110 0
Q ss_pred CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccc
Q 007668 542 GVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEV 580 (594)
Q Consensus 542 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~ 580 (594)
..+...+..+.+++.+||+.||++|||++++++.|++..
T Consensus 335 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~ 373 (377)
T 3cbl_A 335 PCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIR 373 (377)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence 112233467899999999999999999999999998753
No 36
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=6.1e-43 Score=348.28 Aligned_cols=257 Identities=22% Similarity=0.347 Sum_probs=210.5
Q ss_pred hcCCCccceeeeecceEEEEEEecCCcEEEEEeecccchhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEEEEcc
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDFL 385 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~ 385 (594)
.++|...+.||+|+||.||++...++..||+|++...... .+.+.+|++++.+++||||+++++++.+....++||||+
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 101 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS-EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM 101 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBC-HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCC
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCC-HHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEecc
Confidence 4578888999999999999999998999999999864433 467899999999999999999999999999999999999
Q ss_pred CCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccCCceee
Q 007668 386 PGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHIT 465 (594)
Q Consensus 386 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~~~~~ 465 (594)
++++|.+++......+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.++|+|||++...........
T Consensus 102 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 178 (283)
T 3gen_A 102 ANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS 178 (283)
T ss_dssp TTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHST
T ss_pred CCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCccceEEEcCCCCEEEccccccccccccccccc
Confidence 9999999998766779999999999999999999995 4999999999999999999999999999987654332223
Q ss_pred eeeecccCccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHHHHhcccccccccCCCCCCCC
Q 007668 466 TIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQ 544 (594)
Q Consensus 466 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (594)
....+|+.|+|||.+.+..++.++||||+|+++|||++ |+.||....... ........ ... ..+
T Consensus 179 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~------~~~~~~~~--~~~-------~~~ 243 (283)
T 3gen_A 179 VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE------TAEHIAQG--LRL-------YRP 243 (283)
T ss_dssp TSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH------HHHHHHTT--CCC-------CCC
T ss_pred cCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhH------HHHHHhcc--cCC-------CCC
Confidence 33456788999999999999999999999999999998 999987643221 11111111 000 011
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccC
Q 007668 545 SESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVM 581 (594)
Q Consensus 545 ~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~~ 581 (594)
...+..+.+++.+||+.||++|||++|+++.|++.+.
T Consensus 244 ~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~ 280 (283)
T 3gen_A 244 HLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 280 (283)
T ss_dssp TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhh
Confidence 2223678999999999999999999999999987653
No 37
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.9e-42 Score=346.77 Aligned_cols=263 Identities=26% Similarity=0.365 Sum_probs=208.1
Q ss_pred cCCCccceeeeecceEEEEEEec-CCcEEEEEeeccc---chhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEEE
Q 007668 307 ETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKL---NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIY 382 (594)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ 382 (594)
++|+..+.||+|+||.||++... ++..||+|.+... .....+.+.+|+.++.+++||||+++++++.+....++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 90 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVM 90 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEE
Confidence 46888899999999999999754 6899999998542 3334567899999999999999999999999999999999
Q ss_pred EccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccCCc
Q 007668 383 DFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEES 462 (594)
Q Consensus 383 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~~ 462 (594)
||+++++|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++........
T Consensus 91 e~~~g~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 166 (294)
T 4eqm_A 91 EYIEGPTLSEYIESH-GPLSVDTAINFTNQILDGIKHAHD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSL 166 (294)
T ss_dssp ECCCSCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCSSSTTC-----
T ss_pred eCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEEeCCCccccccccc
Confidence 999999999999764 569999999999999999999995 4999999999999999999999999999987665443
Q ss_pred eeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCCCCCC
Q 007668 463 HITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEG 542 (594)
Q Consensus 463 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 542 (594)
.......||+.|+|||.+.+..++.++||||+|+++|||++|+.||....... .......... ... ...
T Consensus 167 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~------~~~~~~~~~~-~~~----~~~ 235 (294)
T 4eqm_A 167 TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVS------IAIKHIQDSV-PNV----TTD 235 (294)
T ss_dssp --------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHH------HHHHHHSSCC-CCH----HHH
T ss_pred cccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH------HHHHHhhccC-CCc----chh
Confidence 33445679999999999999999999999999999999999999997643211 1111111100 000 000
Q ss_pred CCHHHHHHHHHHHHHcccCCCCCCC-CHHHHHHHHhcccCCCC
Q 007668 543 VQSESLDALLAVATQCVSSSPDDRP-TMHRVVQILESEVMTPC 584 (594)
Q Consensus 543 ~~~~~~~~l~~l~~~cl~~dP~~RP-s~~ev~~~L~~~~~~~~ 584 (594)
.....+..+.+++.+|++.||++|| +++++.+.|++.+....
T Consensus 236 ~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~~ 278 (294)
T 4eqm_A 236 VRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHENR 278 (294)
T ss_dssp SCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSSS
T ss_pred cccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhcc
Confidence 1223346799999999999999999 99999999998776543
No 38
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=9.8e-43 Score=353.71 Aligned_cols=247 Identities=23% Similarity=0.349 Sum_probs=206.1
Q ss_pred hcCCCccceeeeecceEEEEEEe-cCCcEEEEEeeccc--chhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEEE
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAM-DDGNVFALKRIDKL--NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIY 382 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ 382 (594)
..+|...+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|+++++.++||||+++++++......++||
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 46788999999999999999987 57999999999753 3344567889999999999999999999999999999999
Q ss_pred EccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccCCc
Q 007668 383 DFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEES 462 (594)
Q Consensus 383 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~~ 462 (594)
||+++|+|.+++..+ ..+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||++........
T Consensus 94 e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 169 (328)
T 3fe3_A 94 EYASGGEVFDYLVAH-GRMKEKEARSKFRQIVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK 169 (328)
T ss_dssp CCCTTCBHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCG
T ss_pred ECCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH---CCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCCc
Confidence 999999999999764 569999999999999999999995 4999999999999999999999999999986654322
Q ss_pred eeeeeeecccCccCccccccCCCC-ccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCCCCC
Q 007668 463 HITTIVAGTFGYLAPEYMQSGRAT-EKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCE 541 (594)
Q Consensus 463 ~~~~~~~gt~~y~aPE~~~~~~~~-~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (594)
.....||+.|+|||++.+..+. .++||||+|+++|||++|+.||+..... ...........
T Consensus 170 --~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~------~~~~~i~~~~~---------- 231 (328)
T 3fe3_A 170 --LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK------ELRERVLRGKY---------- 231 (328)
T ss_dssp --GGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHCCC----------
T ss_pred --cccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHH------HHHHHHHhCCC----------
Confidence 2345799999999999887764 8999999999999999999999764322 11111111110
Q ss_pred CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 542 GVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 542 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
..+...+..+.+++.+||+.||++|||++|+++
T Consensus 232 ~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~ 264 (328)
T 3fe3_A 232 RIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMK 264 (328)
T ss_dssp CCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred CCCCCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 011223467889999999999999999999986
No 39
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=7.3e-43 Score=347.41 Aligned_cols=256 Identities=24% Similarity=0.361 Sum_probs=198.3
Q ss_pred hcCCCccceeeeecceEEEEEEecC----CcEEEEEeeccc-chhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEE
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMDD----GNVFALKRIDKL-NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLL 380 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l 380 (594)
.++|...+.||+|+||.||+|.... +..||+|++... .....+.+.+|+.++++++||||+++++++. ....++
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~l 92 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 92 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEE
Confidence 4678889999999999999997653 457999998753 3344567899999999999999999999985 456889
Q ss_pred EEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccC
Q 007668 381 IYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDE 460 (594)
Q Consensus 381 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~ 460 (594)
||||+++++|.+++......+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++......
T Consensus 93 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 169 (281)
T 1mp8_A 93 IMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 169 (281)
T ss_dssp EEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECC----------
T ss_pred EEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecccccHHHEEECCCCCEEECccccccccCcc
Confidence 999999999999998766679999999999999999999995 49999999999999999999999999999876654
Q ss_pred CceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHHHHhcccccccccCCC
Q 007668 461 ESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPN 539 (594)
Q Consensus 461 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (594)
.........+++.|+|||.+.+..++.++||||||+++|||++ |..||......+ .. .......
T Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~---~~---~~i~~~~--------- 234 (281)
T 1mp8_A 170 TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND---VI---GRIENGE--------- 234 (281)
T ss_dssp ---------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---HH---HHHHTTC---------
T ss_pred cccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHH---HH---HHHHcCC---------
Confidence 4333344557889999999998999999999999999999997 999987643221 11 1111111
Q ss_pred CCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccc
Q 007668 540 CEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEV 580 (594)
Q Consensus 540 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~ 580 (594)
....+...+..+.+++.+||+.||++|||+.|+++.|++.+
T Consensus 235 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 275 (281)
T 1mp8_A 235 RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 275 (281)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 01122334467899999999999999999999999998764
No 40
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=5e-42 Score=345.76 Aligned_cols=261 Identities=25% Similarity=0.436 Sum_probs=205.3
Q ss_pred hcCCCccceeeeecceEEEEEEecCCcEEEEEeeccc--chhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEEEE
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKL--NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYD 383 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e 383 (594)
.++|...+.||+|+||.||+|.... .+|+|.++.. .....+.+.+|++++++++||||+++++++. ....++|+|
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~~--~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e 111 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEECC--EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEe
Confidence 3578889999999999999998653 5888888753 3344567999999999999999999999875 456899999
Q ss_pred ccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccC-Cc
Q 007668 384 FLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDE-ES 462 (594)
Q Consensus 384 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~-~~ 462 (594)
|+++++|.+++......+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++...... ..
T Consensus 112 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~ 188 (307)
T 3lb7_A 112 WCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS 188 (307)
T ss_dssp CCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC-------
T ss_pred cCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCceeccccccc
Confidence 9999999999987777899999999999999999999964 9999999999999999999999999999865432 22
Q ss_pred eeeeeeecccCccCccccc---cCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCCC
Q 007668 463 HITTIVAGTFGYLAPEYMQ---SGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPN 539 (594)
Q Consensus 463 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (594)
.......||+.|+|||++. +..++.++||||||+++|||++|+.||......+. ........ ...+.
T Consensus 189 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~------~~~~~~~~----~~~~~ 258 (307)
T 3lb7_A 189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQ------IIFMVGRG----YASPD 258 (307)
T ss_dssp -----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH------HHHHHHHT----CCCCC
T ss_pred ccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHH------HHHHHhcC----CCCcc
Confidence 2234457999999999986 56789999999999999999999999975432111 11111111 11222
Q ss_pred CCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccCC
Q 007668 540 CEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVMT 582 (594)
Q Consensus 540 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~~~ 582 (594)
........+..+.+++.+||+.+|++|||+.|+++.|+.....
T Consensus 259 ~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~ 301 (307)
T 3lb7_A 259 LSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHS 301 (307)
T ss_dssp STTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred hhhhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhh
Confidence 2222334457799999999999999999999999999876544
No 41
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=8.1e-43 Score=359.74 Aligned_cols=270 Identities=26% Similarity=0.400 Sum_probs=216.5
Q ss_pred CCCCHHHHHHHhcCCCccceeeeecceEEEEEEe------cCCcEEEEEeeccc-chhhHHHHHHHHHHHhhC-CCCeee
Q 007668 295 LPYSSKDIIKKLETLDDDHIIGSGGFGTVYKLAM------DDGNVFALKRIDKL-NEGFDRFFERELEILGSI-KHRYLV 366 (594)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv 366 (594)
.++...++....++|...+.||+|+||.||+|.+ .+++.||||+++.. .....+.+.+|++++.++ +||||+
T Consensus 10 ~~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv 89 (359)
T 3vhe_A 10 LPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 89 (359)
T ss_dssp SCCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred CCCCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCccee
Confidence 4566677777788999999999999999999963 34678999999763 333456799999999999 799999
Q ss_pred eeeeEEeCCCc-eEEEEEccCCCchhhhhhhcCC----------------------------------------------
Q 007668 367 NLRGYCNSPTS-KLLIYDFLPGGSLDEALHERSE---------------------------------------------- 399 (594)
Q Consensus 367 ~l~g~~~~~~~-~~lv~e~~~~gsL~~~l~~~~~---------------------------------------------- 399 (594)
++++++.+... .++||||+++|+|.++++....
T Consensus 90 ~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (359)
T 3vhe_A 90 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVE 169 (359)
T ss_dssp CEEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC----------------------------------------
T ss_pred eeeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccc
Confidence 99999987655 8999999999999999975432
Q ss_pred -------------------CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccC
Q 007668 400 -------------------QLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDE 460 (594)
Q Consensus 400 -------------------~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~ 460 (594)
.+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~ 246 (359)
T 3vhe_A 170 EKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 246 (359)
T ss_dssp --------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSC
T ss_pred ccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeeccc
Confidence 189999999999999999999954 9999999999999999999999999999876443
Q ss_pred Cc-eeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHHHHhcccccccccCC
Q 007668 461 ES-HITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDP 538 (594)
Q Consensus 461 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 538 (594)
.. .......||+.|+|||++.+..++.++||||||+++|||++ |..||........ ..........
T Consensus 247 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~------~~~~~~~~~~------ 314 (359)
T 3vhe_A 247 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE------FCRRLKEGTR------ 314 (359)
T ss_dssp TTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH------HHHHHHHTCC------
T ss_pred ccchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHH------HHHHHHcCCC------
Confidence 32 23344678999999999999999999999999999999998 9999976432210 1111111100
Q ss_pred CCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccC
Q 007668 539 NCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVM 581 (594)
Q Consensus 539 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~~ 581 (594)
...+...+..+.+++.+||+.||++|||++|+++.|++.+.
T Consensus 315 --~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~ 355 (359)
T 3vhe_A 315 --MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 355 (359)
T ss_dssp --CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence 01122234678999999999999999999999999987653
No 42
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=1.1e-42 Score=369.63 Aligned_cols=259 Identities=25% Similarity=0.426 Sum_probs=212.5
Q ss_pred HhcCCCccceeeeecceEEEEEEecCCcEEEEEeecccchhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEEEEc
Q 007668 305 KLETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDF 384 (594)
Q Consensus 305 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~ 384 (594)
..++|...+.||+|+||.||+|.+.++..||||+++.... ..+.|.+|++++++++||||+++++++. ....++||||
T Consensus 186 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~ 263 (454)
T 1qcf_A 186 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM-SVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEF 263 (454)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECC
T ss_pred chHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCCc-cHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEee
Confidence 3567888899999999999999999899999999986443 3678999999999999999999999986 5678999999
Q ss_pred cCCCchhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccCCce
Q 007668 385 LPGGSLDEALHER-SEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESH 463 (594)
Q Consensus 385 ~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~~~ 463 (594)
+++|+|.++++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++........
T Consensus 264 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~ 340 (454)
T 1qcf_A 264 MAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT 340 (454)
T ss_dssp CTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHH
T ss_pred cCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCcee
Confidence 9999999999853 2468999999999999999999995 49999999999999999999999999999876543222
Q ss_pred eeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHHHHhcccccccccCCCCCC
Q 007668 464 ITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEG 542 (594)
Q Consensus 464 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 542 (594)
......+++.|+|||++..+.++.++||||||+++|||++ |+.||......+ ........... .
T Consensus 341 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~------~~~~i~~~~~~---------~ 405 (454)
T 1qcf_A 341 AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE------VIRALERGYRM---------P 405 (454)
T ss_dssp TTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH------HHHHHHHTCCC---------C
T ss_pred ccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHH------HHHHHHcCCCC---------C
Confidence 2233446789999999999999999999999999999999 999997542211 11111111100 0
Q ss_pred CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccCCC
Q 007668 543 VQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVMTP 583 (594)
Q Consensus 543 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~~~~ 583 (594)
.+...+..+.+++.+||+.||++|||+++|++.|++.....
T Consensus 406 ~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~~ 446 (454)
T 1qcf_A 406 RPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTAT 446 (454)
T ss_dssp CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSSS
T ss_pred CCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhcc
Confidence 12234467999999999999999999999999999876654
No 43
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=3.2e-42 Score=352.96 Aligned_cols=262 Identities=24% Similarity=0.414 Sum_probs=212.6
Q ss_pred HhcCCCccceeeeecceEEEEEEec------CCcEEEEEeeccc-chhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCc
Q 007668 305 KLETLDDDHIIGSGGFGTVYKLAMD------DGNVFALKRIDKL-NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTS 377 (594)
Q Consensus 305 ~~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~ 377 (594)
..++|...+.||+|+||.||+|... +++.||||+++.. .....+.+.+|++++++++||||+++++++.+...
T Consensus 45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 124 (343)
T 1luf_A 45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKP 124 (343)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCc
Confidence 3578899999999999999999875 3478999999754 33445779999999999999999999999999999
Q ss_pred eEEEEEccCCCchhhhhhhcC-----------------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCC
Q 007668 378 KLLIYDFLPGGSLDEALHERS-----------------------EQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIK 434 (594)
Q Consensus 378 ~~lv~e~~~~gsL~~~l~~~~-----------------------~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk 434 (594)
.++||||+++|+|.+++.... ..+++..++.++.||++||+|||+ .+|+|||||
T Consensus 125 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlk 201 (343)
T 1luf_A 125 MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE---RKFVHRDLA 201 (343)
T ss_dssp CEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCS
T ss_pred eEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCC
Confidence 999999999999999997632 569999999999999999999995 499999999
Q ss_pred CCCeEecCCCcEEEeecccccccccCCc-eeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCCcch
Q 007668 435 SSNILLDGNLEARVSDFGLAKLLEDEES-HITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASF 512 (594)
Q Consensus 435 ~~NIll~~~~~~~l~Dfgl~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~ 512 (594)
|+||+++.++.+||+|||++........ .......||+.|+|||.+.+..++.++||||||+++|||++ |..||....
T Consensus 202 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 281 (343)
T 1luf_A 202 TRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMA 281 (343)
T ss_dssp GGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred cceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCC
Confidence 9999999999999999999986643322 22334567899999999999999999999999999999999 999987542
Q ss_pred hcccchHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccCCCC
Q 007668 513 IEKGLNIVGWLNFLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVMTPC 584 (594)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~~~~~ 584 (594)
..+ ....... . .....+...+..+.+++.+||+.||++|||+.++++.|+++.....
T Consensus 282 ~~~------~~~~~~~-~--------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~~ 338 (343)
T 1luf_A 282 HEE------VIYYVRD-G--------NILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERAE 338 (343)
T ss_dssp HHH------HHHHHHT-T--------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC---
T ss_pred hHH------HHHHHhC-C--------CcCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhhh
Confidence 211 1111111 1 1111222344679999999999999999999999999998776543
No 44
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=5.4e-42 Score=346.22 Aligned_cols=261 Identities=22% Similarity=0.363 Sum_probs=203.8
Q ss_pred hcCCCccceeeeecceEEEEEEecCCcEEEEEeeccc--chhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEEEE
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKL--NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYD 383 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e 383 (594)
.++|+..+.||+|+||+||+|...+|+.||+|++... .......+.+|++++++++||||+++++++.++...++|||
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 99 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE 99 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence 4678889999999999999999988999999998743 23335678899999999999999999999999999999999
Q ss_pred ccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccCCce
Q 007668 384 FLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESH 463 (594)
Q Consensus 384 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~~~ 463 (594)
|++ |+|.+.+......+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++.......
T Consensus 100 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~- 174 (311)
T 3niz_A 100 FME-KDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQ---HRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVR- 174 (311)
T ss_dssp CCS-EEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC-
T ss_pred CCC-CCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCchHhEEECCCCCEEEccCcCceecCCCcc-
Confidence 997 58888888766779999999999999999999995 4999999999999999999999999999987653322
Q ss_pred eeeeeecccCccCcccccc-CCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhccccc----------
Q 007668 464 ITTIVAGTFGYLAPEYMQS-GRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQ---------- 532 (594)
Q Consensus 464 ~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~---------- 532 (594)
......||+.|+|||++.+ ..++.++||||+|+++|||++|+.||......+. ...... .......
T Consensus 175 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~--~~~i~~-~~~~~~~~~~~~~~~~~ 251 (311)
T 3niz_A 175 SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQ--LPKIFS-ILGTPNPREWPQVQELP 251 (311)
T ss_dssp ---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTH--HHHHHH-HHCCCCTTTSGGGTTSH
T ss_pred cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHH--HHHHHH-HHCCCChHHhhhhhccc
Confidence 2333568999999999876 5689999999999999999999999976433221 111111 1100000
Q ss_pred ------ccccCCC-CCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 533 ------REIIDPN-CEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 533 ------~~~~~~~-~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
....... .....+....++.+|+.+||+.||++|||++|+++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 252 LWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp HHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred hhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 0000000 00011223467889999999999999999999986
No 45
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=2.1e-42 Score=341.24 Aligned_cols=257 Identities=27% Similarity=0.394 Sum_probs=212.6
Q ss_pred hcCCCccceeeeecceEEEEEEecCCcEEEEEeecccchhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEEEEcc
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDFL 385 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~ 385 (594)
.++|...+.||+|+||.||++...+++.||+|++...... .+.+.+|++++++++||||+++++++.+....++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS-EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFM 85 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBC-HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCC
T ss_pred hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCCC-HHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCC
Confidence 3567888999999999999999988999999999864432 467899999999999999999999999999999999999
Q ss_pred CCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccCCceee
Q 007668 386 PGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHIT 465 (594)
Q Consensus 386 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~~~~~ 465 (594)
++++|.+++......+++..+..++.|++.||+|||+ .+++||||||+||+++.++.++|+|||++...........
T Consensus 86 ~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 162 (267)
T 3t9t_A 86 EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 162 (267)
T ss_dssp TTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHST
T ss_pred CCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCchheEEECCCCCEEEccccccccccccccccc
Confidence 9999999998776779999999999999999999995 4999999999999999999999999999986644322222
Q ss_pred eeeecccCccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHHHHhcccccccccCCCCCCCC
Q 007668 466 TIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQ 544 (594)
Q Consensus 466 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (594)
....++..|+|||.+.+..++.++||||+|+++|||++ |+.||....... ......... .. ..+
T Consensus 163 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~------~~~~i~~~~--~~-------~~~ 227 (267)
T 3t9t_A 163 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE------VVEDISTGF--RL-------YKP 227 (267)
T ss_dssp TSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH------HHHHHHTTC--CC-------CCC
T ss_pred ccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHH------HHHHHhcCC--cC-------CCC
Confidence 23456788999999998899999999999999999999 899987532211 111111110 00 011
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccC
Q 007668 545 SESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVM 581 (594)
Q Consensus 545 ~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~~ 581 (594)
...+..+.+++.+||+.||++|||++++++.|++...
T Consensus 228 ~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 228 RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 2234678999999999999999999999999987643
No 46
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=2.7e-42 Score=366.31 Aligned_cols=260 Identities=27% Similarity=0.429 Sum_probs=208.1
Q ss_pred hcCCCccceeeeecceEEEEEEecCCcEEEEEeecccchhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEEEEcc
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDFL 385 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~ 385 (594)
.++|...+.||+|+||.||+|.+.++..||||+++.... ..+.|.+|++++++++||||+++++++.+ ...++||||+
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~ 260 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 260 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred hhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhh
Confidence 456788899999999999999999888999999986443 35679999999999999999999999876 6789999999
Q ss_pred CCCchhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccCCcee
Q 007668 386 PGGSLDEALHER-SEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHI 464 (594)
Q Consensus 386 ~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~~~~ 464 (594)
++|+|.++++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++.........
T Consensus 261 ~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 337 (452)
T 1fmk_A 261 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA 337 (452)
T ss_dssp TTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCCTTC---------
T ss_pred cCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChhhEEECCCCCEEECCCccceecCCCceec
Confidence 999999999853 3569999999999999999999995 499999999999999999999999999998765443333
Q ss_pred eeeeecccCccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHHHHhcccccccccCCCCCCC
Q 007668 465 TTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGV 543 (594)
Q Consensus 465 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 543 (594)
.....++..|+|||.+.++.++.++||||||+++|||++ |+.||......+ .......... ...
T Consensus 338 ~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~------~~~~i~~~~~---------~~~ 402 (452)
T 1fmk_A 338 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE------VLDQVERGYR---------MPC 402 (452)
T ss_dssp -----CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH------HHHHHHTTCC---------CCC
T ss_pred ccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHH------HHHHHHcCCC---------CCC
Confidence 334557889999999999999999999999999999999 999987542211 1111111110 011
Q ss_pred CHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccCCCCC
Q 007668 544 QSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVMTPCP 585 (594)
Q Consensus 544 ~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~~~~~~ 585 (594)
+...+..+.+++.+||+.||++|||++++++.|+.......|
T Consensus 403 ~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~~~ 444 (452)
T 1fmk_A 403 PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 444 (452)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSCC
T ss_pred CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccCCc
Confidence 223446789999999999999999999999999988766554
No 47
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=1.7e-42 Score=348.35 Aligned_cols=262 Identities=23% Similarity=0.421 Sum_probs=208.3
Q ss_pred cCCCccceeeeecceEEEEEEe-----cCCcEEEEEeeccc-chhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCC--Cce
Q 007668 307 ETLDDDHIIGSGGFGTVYKLAM-----DDGNVFALKRIDKL-NEGFDRFFERELEILGSIKHRYLVNLRGYCNSP--TSK 378 (594)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~--~~~ 378 (594)
+.|+..+.||+|+||.||+|.+ .+++.||+|++... .....+.+.+|++++.+++||||+++++++.+. ...
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 4577889999999999999983 46899999999753 333457789999999999999999999999776 668
Q ss_pred EEEEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccc
Q 007668 379 LLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLE 458 (594)
Q Consensus 379 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~ 458 (594)
++||||+++|+|.+++......+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.++|+|||++....
T Consensus 101 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 177 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIE 177 (302)
T ss_dssp EEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhc---CCcccCCCchheEEEcCCCCEEECccccccccc
Confidence 99999999999999998777789999999999999999999995 499999999999999999999999999998776
Q ss_pred cCCce--eeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcc---------cchHHHHHHHHh
Q 007668 459 DEESH--ITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEK---------GLNIVGWLNFLI 527 (594)
Q Consensus 459 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~---------~~~~~~~~~~~~ 527 (594)
..... ......||..|+|||.+.+..++.++||||+|+++|||++|..|+....... .......... .
T Consensus 178 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 256 (302)
T 4e5w_A 178 TDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNT-L 256 (302)
T ss_dssp TTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHH-H
T ss_pred CCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHH-H
Confidence 54432 2233567888999999999899999999999999999999999865432110 0000111111 1
Q ss_pred cccccccccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccc
Q 007668 528 SEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEV 580 (594)
Q Consensus 528 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~ 580 (594)
... .....+...+..+.+++.+||+.||++|||++++++.|++.+
T Consensus 257 ~~~--------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 257 KEG--------KRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp HTT--------CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred hcc--------CCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 110 111122344577999999999999999999999999998754
No 48
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=8.4e-42 Score=342.61 Aligned_cols=272 Identities=16% Similarity=0.196 Sum_probs=215.5
Q ss_pred cCCCccceeeeecceEEEEEEe-cCCcEEEEEeecccchhhHHHHHHHHHHHhhC-CCCeeeeeeeEEeCCCceEEEEEc
Q 007668 307 ETLDDDHIIGSGGFGTVYKLAM-DDGNVFALKRIDKLNEGFDRFFERELEILGSI-KHRYLVNLRGYCNSPTSKLLIYDF 384 (594)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~ 384 (594)
++|...+.||+|+||.||+|.. .+++.||||++..... .+.+.+|++++..+ +|+|++++++++.+....++||||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 87 (298)
T 1csn_A 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD--APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDL 87 (298)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT--SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEEC
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc--cHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEe
Confidence 4688889999999999999975 5789999998865332 34578899999999 799999999999999999999999
Q ss_pred cCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCc-----EEEeeccccccccc
Q 007668 385 LPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLE-----ARVSDFGLAKLLED 459 (594)
Q Consensus 385 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~-----~~l~Dfgl~~~~~~ 459 (594)
+ +++|.+++......+++..+..++.||+.||+||| +.+|+||||||+||+++.++. +||+|||++.....
T Consensus 88 ~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~ 163 (298)
T 1csn_A 88 L-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIH---EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRD 163 (298)
T ss_dssp C-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBC
T ss_pred c-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEeccCCCCCCCeEEEEECcccccccc
Confidence 9 99999999876677999999999999999999999 459999999999999987766 99999999987654
Q ss_pred CCce------eeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccc
Q 007668 460 EESH------ITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQR 533 (594)
Q Consensus 460 ~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 (594)
.... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||.........................
T Consensus 164 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (298)
T 1csn_A 164 PVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLR 243 (298)
T ss_dssp TTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHH
T ss_pred ccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccHH
Confidence 3321 2244579999999999999999999999999999999999999997643221111111111100000000
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccCCC--CCccccccC
Q 007668 534 EIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVMTP--CPSDFYDSN 592 (594)
Q Consensus 534 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~~~~--~~~~~~~~~ 592 (594)
. .....+..+.+++.+||+.||++|||+++|++.|++..... ...+-|+|+
T Consensus 244 ~--------~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~~~~~~~~dw~ 296 (298)
T 1csn_A 244 E--------LCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNTTEDENFDWN 296 (298)
T ss_dssp H--------HTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCCSCSCCGGG
T ss_pred H--------HHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcCCCCCCccccC
Confidence 0 01123367999999999999999999999999999876543 333455554
No 49
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=2.2e-42 Score=351.73 Aligned_cols=265 Identities=26% Similarity=0.397 Sum_probs=213.0
Q ss_pred cCCCccceeeeecceEEEEEEe-----cCCcEEEEEeecccchhhHHHHHHHHHHHhhCCCCeeeeeeeEEe--CCCceE
Q 007668 307 ETLDDDHIIGSGGFGTVYKLAM-----DDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCN--SPTSKL 379 (594)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~--~~~~~~ 379 (594)
++|+..+.||+|+||.||++.+ .++..||||++........+.+.+|++++++++||||+++++++. +....+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 102 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR 102 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence 5788889999999999999984 468899999998776666778999999999999999999999886 455688
Q ss_pred EEEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeeccccccccc
Q 007668 380 LIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLED 459 (594)
Q Consensus 380 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~ 459 (594)
+||||+++++|.+++......+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++.....
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~ 179 (327)
T 3lxl_A 103 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGS---RRCVHRDLAARNILVESEAHVKIADFGLAKLLPL 179 (327)
T ss_dssp EEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCGGGCEECCT
T ss_pred EEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCChhhEEECCCCCEEEcccccceeccc
Confidence 9999999999999998766679999999999999999999995 4999999999999999999999999999987654
Q ss_pred CCcee--eeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhccc--------chHHHHHHHHhcc
Q 007668 460 EESHI--TTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKG--------LNIVGWLNFLISE 529 (594)
Q Consensus 460 ~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~--------~~~~~~~~~~~~~ 529 (594)
..... .....||+.|+|||.+.+..++.++||||||+++|+|++|..||........ .............
T Consensus 180 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (327)
T 3lxl_A 180 DKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEE 259 (327)
T ss_dssp TCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHT
T ss_pred CCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhc
Confidence 43322 2334578889999999988899999999999999999999999865432100 0000000001111
Q ss_pred cccccccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccCC
Q 007668 530 DRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVMT 582 (594)
Q Consensus 530 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~~~ 582 (594)
. .....+...+..+.+++.+||+.||++|||++|+++.|+.....
T Consensus 260 ~--------~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 304 (327)
T 3lxl_A 260 G--------QRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSG 304 (327)
T ss_dssp T--------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC---
T ss_pred c--------cCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence 0 11112334457799999999999999999999999999987654
No 50
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=9.1e-42 Score=347.59 Aligned_cols=248 Identities=21% Similarity=0.333 Sum_probs=205.6
Q ss_pred hcCCCccceeeeecceEEEEEEec-CCcEEEEEeeccc---chhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEE
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKL---NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLI 381 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv 381 (594)
.++|+..+.||+|+||.||++... +|+.||+|++++. .......+.+|++++..++||||+++++++.+....++|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 467888999999999999999775 6899999999753 223456788999999999999999999999999999999
Q ss_pred EEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccCC
Q 007668 382 YDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEE 461 (594)
Q Consensus 382 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~ 461 (594)
|||+++|+|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++++||+|||+++......
T Consensus 84 ~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 159 (337)
T 1o6l_A 84 MEYANGGELFFHLSRE-RVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG 159 (337)
T ss_dssp EECCTTCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT
T ss_pred EeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCcCCHHHEEECCCCCEEEeeccchhhcccCC
Confidence 9999999999999753 568999999999999999999995 499999999999999999999999999998643322
Q ss_pred ceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCCCCC
Q 007668 462 SHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCE 541 (594)
Q Consensus 462 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (594)
. ......||+.|+|||++.+..++.++||||+|+++|||++|+.||...... .......... . .
T Consensus 160 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~------~~~~~i~~~~-~------~-- 223 (337)
T 1o6l_A 160 A-TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE------RLFELILMEE-I------R-- 223 (337)
T ss_dssp C-CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHCC-C------C--
T ss_pred C-cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHH------HHHHHHHcCC-C------C--
Confidence 2 234567999999999999999999999999999999999999999754221 1111111111 0 1
Q ss_pred CCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 007668 542 GVQSESLDALLAVATQCVSSSPDDRP-----TMHRVVQ 574 (594)
Q Consensus 542 ~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~ev~~ 574 (594)
.+...+..+.+++.+||+.||++|| +++|+++
T Consensus 224 -~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~ 260 (337)
T 1o6l_A 224 -FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp -CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred -CCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence 1223446789999999999999999 8998875
No 51
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=5.6e-42 Score=348.71 Aligned_cols=255 Identities=25% Similarity=0.402 Sum_probs=201.9
Q ss_pred cCCCccceeeeecceEEEEEEec-CCc----EEEEEeeccc-chhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEE
Q 007668 307 ETLDDDHIIGSGGFGTVYKLAMD-DGN----VFALKRIDKL-NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLL 380 (594)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~----~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l 380 (594)
++|+..+.||+|+||+||+|.+. +++ +||+|.+... .....+.+.+|++++++++||||+++++++.+.. .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~ 93 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEE
Confidence 56888899999999999999864 344 3588887643 3344678999999999999999999999998754 789
Q ss_pred EEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccC
Q 007668 381 IYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDE 460 (594)
Q Consensus 381 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~ 460 (594)
|+||+++|+|.+++......+++..++.++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 94 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~ 170 (327)
T 3poz_A 94 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170 (327)
T ss_dssp EEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTT
T ss_pred EEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcceeEccCC
Confidence 9999999999999988777899999999999999999999964 9999999999999999999999999999876544
Q ss_pred Cce-eeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHHHHhcccccccccCC
Q 007668 461 ESH-ITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDP 538 (594)
Q Consensus 461 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 538 (594)
... ......||+.|+|||++.+..++.++||||||+++|||++ |+.||........ .. .+....
T Consensus 171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~---~~----~~~~~~------- 236 (327)
T 3poz_A 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI---SS----ILEKGE------- 236 (327)
T ss_dssp CC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH---HH----HHHTTC-------
T ss_pred cccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHH---HH----HHHcCC-------
Confidence 322 2233457889999999999999999999999999999999 9999976432211 11 111110
Q ss_pred CCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccc
Q 007668 539 NCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEV 580 (594)
Q Consensus 539 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~ 580 (594)
....+......+.+++.+||+.||++|||+.|+++.|+...
T Consensus 237 -~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~ 277 (327)
T 3poz_A 237 -RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMA 277 (327)
T ss_dssp -CCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHH
T ss_pred -CCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 00112234467899999999999999999999999997754
No 52
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=2.9e-42 Score=370.02 Aligned_cols=259 Identities=24% Similarity=0.389 Sum_probs=214.1
Q ss_pred hcCCCccceeeeecceEEEEEEecC-CcEEEEEeecccchhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEEEEc
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMDD-GNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDF 384 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~ 384 (594)
.++|...+.||+|+||.||+|.+.. +..||||.++.... ..+.|.+|++++++++||||++++++|.+....++||||
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~ 297 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 297 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc-chHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEc
Confidence 4567888999999999999998875 88999999976443 356799999999999999999999999999999999999
Q ss_pred cCCCchhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccCCce
Q 007668 385 LPGGSLDEALHER-SEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESH 463 (594)
Q Consensus 385 ~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~~~ 463 (594)
+++|+|.++++.. ...+++..++.++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++........
T Consensus 298 ~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 374 (495)
T 1opk_A 298 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYT 374 (495)
T ss_dssp CTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEE
T ss_pred cCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChhhEEECCCCcEEEeecccceeccCCcee
Confidence 9999999999864 3559999999999999999999995 49999999999999999999999999999876544333
Q ss_pred eeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHHHHhcccccccccCCCCCC
Q 007668 464 ITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEG 542 (594)
Q Consensus 464 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 542 (594)
......++..|+|||++.+..++.++||||||+++|||++ |..||....... .. ....... +. .
T Consensus 375 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~---~~---~~~~~~~--~~-------~ 439 (495)
T 1opk_A 375 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ---VY---ELLEKDY--RM-------E 439 (495)
T ss_dssp CCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---HH---HHHHTTC--CC-------C
T ss_pred ecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHH---HH---HHHHcCC--CC-------C
Confidence 3333456789999999998999999999999999999999 999987643221 11 1111110 00 1
Q ss_pred CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccCCC
Q 007668 543 VQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVMTP 583 (594)
Q Consensus 543 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~~~~ 583 (594)
.+...+..+.+|+.+||+.||++|||+.+|++.|+......
T Consensus 440 ~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~~~ 480 (495)
T 1opk_A 440 RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 480 (495)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCSSS
T ss_pred CCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHhcc
Confidence 12234467899999999999999999999999999876543
No 53
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=8.4e-42 Score=355.00 Aligned_cols=258 Identities=28% Similarity=0.415 Sum_probs=211.0
Q ss_pred hcCCCccceeeeecceEEEEEEec--------CCcEEEEEeeccc-chhhHHHHHHHHHHHhhC-CCCeeeeeeeEEeCC
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMD--------DGNVFALKRIDKL-NEGFDRFFERELEILGSI-KHRYLVNLRGYCNSP 375 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~ 375 (594)
.++|...+.||+|+||.||+|... .+..||||+++.. .....+.+.+|+++++++ +||||+++++++.+.
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 457888899999999999999753 3457999999764 334457789999999999 899999999999999
Q ss_pred CceEEEEEccCCCchhhhhhhcC---------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEe
Q 007668 376 TSKLLIYDFLPGGSLDEALHERS---------------EQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILL 440 (594)
Q Consensus 376 ~~~~lv~e~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll 440 (594)
...++||||+++|+|.+++.... ..+++..++.++.||+.||+|||+ .+|+||||||+|||+
T Consensus 148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll 224 (382)
T 3tt0_A 148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLV 224 (382)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEE
T ss_pred CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCcceEEE
Confidence 99999999999999999998643 359999999999999999999995 499999999999999
Q ss_pred cCCCcEEEeecccccccccCCc-eeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCCcchhcccch
Q 007668 441 DGNLEARVSDFGLAKLLEDEES-HITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLN 518 (594)
Q Consensus 441 ~~~~~~~l~Dfgl~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~ 518 (594)
+.++.+||+|||+++....... .......+|+.|+|||++.+..++.++||||||+++|||++ |..||......
T Consensus 225 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~---- 300 (382)
T 3tt0_A 225 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE---- 300 (382)
T ss_dssp CTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH----
T ss_pred cCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH----
Confidence 9999999999999987654332 22233457889999999999999999999999999999999 99998754322
Q ss_pred HHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccC
Q 007668 519 IVGWLNFLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVM 581 (594)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~~ 581 (594)
........... ...+...+..+.+++.+||+.||++|||++||++.|++...
T Consensus 301 --~~~~~~~~~~~---------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~ 352 (382)
T 3tt0_A 301 --ELFKLLKEGHR---------MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 352 (382)
T ss_dssp --HHHHHHHTTCC---------CCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --HHHHHHHcCCC---------CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 11111111110 01122334679999999999999999999999999998754
No 54
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.8e-42 Score=351.22 Aligned_cols=264 Identities=23% Similarity=0.397 Sum_probs=210.1
Q ss_pred HHhcCCCccceeeeecceEEEEEEe------cCCcEEEEEeeccc-chhhHHHHHHHHHHHhhC-CCCeeeeeeeEEeCC
Q 007668 304 KKLETLDDDHIIGSGGFGTVYKLAM------DDGNVFALKRIDKL-NEGFDRFFERELEILGSI-KHRYLVNLRGYCNSP 375 (594)
Q Consensus 304 ~~~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~ 375 (594)
...++|...+.||+|+||.||+|.. .++..||+|.+... .....+.+.+|++++.++ +||||+++++++...
T Consensus 42 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 121 (344)
T 1rjb_A 42 FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLS 121 (344)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred cCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeC
Confidence 3457888999999999999999986 24568999999753 233456789999999999 899999999999999
Q ss_pred CceEEEEEccCCCchhhhhhhcCC----------------------CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCC
Q 007668 376 TSKLLIYDFLPGGSLDEALHERSE----------------------QLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDI 433 (594)
Q Consensus 376 ~~~~lv~e~~~~gsL~~~l~~~~~----------------------~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dl 433 (594)
...++||||+++|+|.+++..... .+++..+..++.||+.||+|||+ .+|+||||
T Consensus 122 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Di 198 (344)
T 1rjb_A 122 GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDL 198 (344)
T ss_dssp SSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHH---TTEEETTC
T ss_pred CccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCC
Confidence 999999999999999999986432 37999999999999999999995 49999999
Q ss_pred CCCCeEecCCCcEEEeecccccccccCCce-eeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCCcc
Q 007668 434 KSSNILLDGNLEARVSDFGLAKLLEDEESH-ITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDAS 511 (594)
Q Consensus 434 k~~NIll~~~~~~~l~Dfgl~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~ 511 (594)
||+||+++.++.++|+|||++......... ......||+.|+|||.+.+..++.++||||||+++|||++ |..||...
T Consensus 199 kp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 278 (344)
T 1rjb_A 199 AARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGI 278 (344)
T ss_dssp SGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred ChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccC
Confidence 999999999999999999999876544332 2334567889999999999999999999999999999998 99998764
Q ss_pred hhcccchHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccCCCC
Q 007668 512 FIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVMTPC 584 (594)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~~~~~ 584 (594)
.... ... ...... .. . ..+...+..+.+++.+||+.||++|||+.|+++.|+..+....
T Consensus 279 ~~~~--~~~----~~~~~~-~~----~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~ 337 (344)
T 1rjb_A 279 PVDA--NFY----KLIQNG-FK----M---DQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAE 337 (344)
T ss_dssp CCSH--HHH----HHHHTT-CC----C---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC----
T ss_pred CcHH--HHH----HHHhcC-CC----C---CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHH
Confidence 3211 111 111111 00 0 1122234679999999999999999999999999998765543
No 55
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=1.1e-41 Score=340.14 Aligned_cols=261 Identities=25% Similarity=0.385 Sum_probs=201.4
Q ss_pred cCCCccceeeeecceEEEEEEecCCcEEEEEeecccc--hhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEEEEc
Q 007668 307 ETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLN--EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDF 384 (594)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~ 384 (594)
++|...+.||+|+||.||+|...+++.||+|++.... ....+.+.+|++++++++||||+++++++.+....++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 5688889999999999999998889999999986532 22346788999999999999999999999999999999999
Q ss_pred cCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccCCcee
Q 007668 385 LPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHI 464 (594)
Q Consensus 385 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~~~~ 464 (594)
+++ +|.+++......+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||++........ .
T Consensus 82 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~ 156 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHD---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVR-K 156 (288)
T ss_dssp CSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred cCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEEeECccccccCcccc-c
Confidence 975 9999998766779999999999999999999995 4999999999999999999999999999986653222 2
Q ss_pred eeeeecccCccCcccccc-CCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhccc-------cccccc
Q 007668 465 TTIVAGTFGYLAPEYMQS-GRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISED-------RQREII 536 (594)
Q Consensus 465 ~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~ 536 (594)
.....||+.|+|||++.+ ..++.++||||+|+++|||++|+.||......+. ............ ......
T Consensus 157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T 1ob3_A 157 YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQ--LMRIFRILGTPNSKNWPNVTELPKY 234 (288)
T ss_dssp -----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH--HHHHHHHHCCCCTTTSTTGGGSTTC
T ss_pred cccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHHHCCCChhhchhhhccccc
Confidence 233468999999999876 4589999999999999999999999976432211 111111000000 000001
Q ss_pred CCCC--------CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 537 DPNC--------EGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 537 ~~~~--------~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
++.. .......+..+.+++.+||+.||++|||++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 235 DPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp CTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 1111 0111234567889999999999999999999875
No 56
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=1e-41 Score=346.15 Aligned_cols=259 Identities=23% Similarity=0.356 Sum_probs=195.0
Q ss_pred hcCCCccceeeeecceEEEEEEecCCc----EEEEEeeccc--chhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCce-
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMDDGN----VFALKRIDKL--NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSK- 378 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~----~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~- 378 (594)
.++|...+.||+|+||.||+|...... .||||+++.. .....+.+.+|++++++++||||+++++++......
T Consensus 22 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 101 (323)
T 3qup_A 22 EQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKG 101 (323)
T ss_dssp ---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC----
T ss_pred hhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccccc
Confidence 467889999999999999999876433 7999998753 334467799999999999999999999999877665
Q ss_pred -----EEEEEccCCCchhhhhhhcC-----CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEE
Q 007668 379 -----LLIYDFLPGGSLDEALHERS-----EQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARV 448 (594)
Q Consensus 379 -----~lv~e~~~~gsL~~~l~~~~-----~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l 448 (594)
++|+||+++|+|.+++.... ..+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||
T Consensus 102 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~---~~ivH~Dikp~NIli~~~~~~kl 178 (323)
T 3qup_A 102 RLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSS---RNFIHRDLAARNCMLAEDMTVCV 178 (323)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCEEE
T ss_pred CCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHc---CCcccCCCCcceEEEcCCCCEEE
Confidence 89999999999999986432 258999999999999999999995 49999999999999999999999
Q ss_pred eecccccccccCCce-eeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHHHH
Q 007668 449 SDFGLAKLLEDEESH-ITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLNFL 526 (594)
Q Consensus 449 ~Dfgl~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 526 (594)
+|||+++........ ......+++.|+|||.+.+..++.++||||||+++|||++ |..||....... .....
T Consensus 179 ~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~------~~~~~ 252 (323)
T 3qup_A 179 ADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE------IYNYL 252 (323)
T ss_dssp CCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG------HHHHH
T ss_pred eeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHH------HHHHH
Confidence 999999876543322 2233456889999999999999999999999999999999 999987643221 11111
Q ss_pred hcccccccccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccCC
Q 007668 527 ISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVMT 582 (594)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~~~ 582 (594)
.... ....+...+..+.+++.+||+.||++|||+.++++.|++.+..
T Consensus 253 ~~~~---------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~ 299 (323)
T 3qup_A 253 IGGN---------RLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGH 299 (323)
T ss_dssp HTTC---------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred hcCC---------CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 1111 1112223446799999999999999999999999999987654
No 57
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=9e-41 Score=338.65 Aligned_cols=268 Identities=24% Similarity=0.317 Sum_probs=210.6
Q ss_pred cCCCccceeeeecceEEEEEEecC-CcEEEEEeecccc-hhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCC--ceEEEE
Q 007668 307 ETLDDDHIIGSGGFGTVYKLAMDD-GNVFALKRIDKLN-EGFDRFFERELEILGSIKHRYLVNLRGYCNSPT--SKLLIY 382 (594)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~--~~~lv~ 382 (594)
++|...+.||+|+||.||+|.... ++.||||++.... ....+.+.+|++++++++||||+++++++.... ..++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence 467888999999999999998764 8999999997533 233567889999999999999999999987655 678999
Q ss_pred EccCCCchhhhhhhcCC--CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEe----cCCCcEEEeecccccc
Q 007668 383 DFLPGGSLDEALHERSE--QLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILL----DGNLEARVSDFGLAKL 456 (594)
Q Consensus 383 e~~~~gsL~~~l~~~~~--~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll----~~~~~~~l~Dfgl~~~ 456 (594)
||+++++|.+++..... .+++..+..++.||+.||+|||+ .+|+||||||+||++ +.++.+||+|||+++.
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~ 165 (319)
T 4euu_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE 165 (319)
T ss_dssp ECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEE
T ss_pred eCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEEeccCCCCceEEEccCCCcee
Confidence 99999999999986432 39999999999999999999995 499999999999999 7788899999999987
Q ss_pred cccCCceeeeeeecccCccCccccc--------cCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhc
Q 007668 457 LEDEESHITTIVAGTFGYLAPEYMQ--------SGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLIS 528 (594)
Q Consensus 457 ~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 528 (594)
...... .....||+.|+|||++. +..++.++||||||+++|||++|+.||......... .........
T Consensus 166 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~--~~~~~~~~~ 241 (319)
T 4euu_A 166 LEDDEQ--FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRN--KEVMYKIIT 241 (319)
T ss_dssp CCTTCC--BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGC--HHHHHHHHH
T ss_pred cCCCCc--eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchh--HHHHHHHhc
Confidence 654432 23356899999999986 567899999999999999999999998653222111 111111111
Q ss_pred ccc---cccc---------cC---CCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccC
Q 007668 529 EDR---QREI---------ID---PNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVM 581 (594)
Q Consensus 529 ~~~---~~~~---------~~---~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~~ 581 (594)
... .... .. +............+.+++.+||+.||++|||++|+++...+...
T Consensus 242 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~ 309 (319)
T 4euu_A 242 GKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH 309 (319)
T ss_dssp HCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC
T ss_pred CCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhh
Confidence 110 0000 00 11113556778889999999999999999999999998876543
No 58
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=1.6e-41 Score=339.11 Aligned_cols=260 Identities=26% Similarity=0.465 Sum_probs=197.9
Q ss_pred hcCCCccceeeeecceEEEEEEecCCcEEEEEeeccc--chhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEEEE
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKL--NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYD 383 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e 383 (594)
-.+|+..+.||+|+||.||+|...+ .||+|+++.. .....+.+.+|++++++++||||+++++++ .....++|||
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e 99 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQ 99 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESSS--EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEE
T ss_pred ccceeeeeEecCCCCeEEEEEEEcC--ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEE
Confidence 3578889999999999999998653 5999998753 334456799999999999999999999976 4556899999
Q ss_pred ccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccCC-c
Q 007668 384 FLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEE-S 462 (594)
Q Consensus 384 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~-~ 462 (594)
|+++++|.+++......+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.++|+|||++....... .
T Consensus 100 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 176 (289)
T 3og7_A 100 WCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGS 176 (289)
T ss_dssp CCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTTEEEECCCC-----------
T ss_pred ecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHh---CCcccccCccceEEECCCCCEEEccceecccccccccc
Confidence 999999999998777789999999999999999999995 499999999999999999999999999998654322 2
Q ss_pred eeeeeeecccCccCccccc---cCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCCC
Q 007668 463 HITTIVAGTFGYLAPEYMQ---SGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPN 539 (594)
Q Consensus 463 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (594)
.......||+.|+|||.+. +..++.++||||||+++|||++|+.||....... .... ..... ...+.
T Consensus 177 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-----~~~~-~~~~~----~~~~~ 246 (289)
T 3og7_A 177 HQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD-----QIIE-MVGRG----SLSPD 246 (289)
T ss_dssp -------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHH-----HHHH-HHHHT----SCCCC
T ss_pred ccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHH-----HHHH-Hhccc----ccCcc
Confidence 2233456899999999986 5678899999999999999999999997532211 1111 11111 11222
Q ss_pred CCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccC
Q 007668 540 CEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVM 581 (594)
Q Consensus 540 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~~ 581 (594)
........+..+.+++.+||+.||++|||++|+++.|+++..
T Consensus 247 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 247 LSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp TTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred hhhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 222333455789999999999999999999999999998653
No 59
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=4.4e-42 Score=354.92 Aligned_cols=257 Identities=26% Similarity=0.385 Sum_probs=207.7
Q ss_pred hcCCCccceeeeecceEEEEEEec------CCcEEEEEeeccc-chhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCce
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMD------DGNVFALKRIDKL-NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSK 378 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~ 378 (594)
.++|...+.||+|+||.||+|.+. ++..||||+++.. .......+.+|+.++++++||||+++++++.+....
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 149 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 149 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 357888899999999999999853 4678999999753 344456788999999999999999999999999999
Q ss_pred EEEEEccCCCchhhhhhhcC------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCC---cEEEe
Q 007668 379 LLIYDFLPGGSLDEALHERS------EQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNL---EARVS 449 (594)
Q Consensus 379 ~lv~e~~~~gsL~~~l~~~~------~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~---~~~l~ 449 (594)
++||||+++|+|.+++.... ..+++..++.++.||+.||+|||+ .+|+||||||+|||++.++ .+||+
T Consensus 150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~~~~kL~ 226 (367)
T 3l9p_A 150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIG 226 (367)
T ss_dssp EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChhhEEEecCCCCceEEEC
Confidence 99999999999999998643 359999999999999999999995 4999999999999999554 59999
Q ss_pred ecccccccccCCc-eeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHHHHh
Q 007668 450 DFGLAKLLEDEES-HITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLNFLI 527 (594)
Q Consensus 450 Dfgl~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 527 (594)
|||+++....... .......||+.|+|||++.+..++.++||||||+++|||++ |..||...... .......
T Consensus 227 DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~------~~~~~i~ 300 (367)
T 3l9p_A 227 DFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ------EVLEFVT 300 (367)
T ss_dssp CCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH------HHHHHHH
T ss_pred CCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH------HHHHHHH
Confidence 9999986533221 22233567899999999999999999999999999999998 99998764322 1111111
Q ss_pred cccccccccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccc
Q 007668 528 SEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEV 580 (594)
Q Consensus 528 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~ 580 (594)
.... ...+...+..+.+++.+||+.||++|||+++|++.|+...
T Consensus 301 ~~~~---------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~ 344 (367)
T 3l9p_A 301 SGGR---------MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT 344 (367)
T ss_dssp TTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cCCC---------CCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence 1111 1112233467899999999999999999999999997753
No 60
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=1.3e-41 Score=343.84 Aligned_cols=258 Identities=25% Similarity=0.401 Sum_probs=211.2
Q ss_pred hcCCCccceeeeecceEEEEEEe------cCCcEEEEEeeccc-chhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCce
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAM------DDGNVFALKRIDKL-NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSK 378 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~ 378 (594)
.++|...+.||+|+||.||+|.. .++..||||++... .....+.+.+|++++++++||||+++++++.+....
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 101 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL 101 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence 46788889999999999999975 34578999999753 334457789999999999999999999999999999
Q ss_pred EEEEEccCCCchhhhhhhcC-----------------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCC
Q 007668 379 LLIYDFLPGGSLDEALHERS-----------------------EQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKS 435 (594)
Q Consensus 379 ~lv~e~~~~gsL~~~l~~~~-----------------------~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~ 435 (594)
++||||+++|+|.+++.... ..+++..+..++.||++||+|||+. +|+||||||
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dikp 178 (314)
T 2ivs_A 102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAA 178 (314)
T ss_dssp EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCCSG
T ss_pred EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcccccch
Confidence 99999999999999998642 2389999999999999999999964 999999999
Q ss_pred CCeEecCCCcEEEeecccccccccCCcee-eeeeecccCccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCCcchh
Q 007668 436 SNILLDGNLEARVSDFGLAKLLEDEESHI-TTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFI 513 (594)
Q Consensus 436 ~NIll~~~~~~~l~Dfgl~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~ 513 (594)
+||+++.++.+||+|||++.......... .....+++.|+|||.+.+..++.++||||||+++|||++ |..||.....
T Consensus 179 ~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 258 (314)
T 2ivs_A 179 RNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP 258 (314)
T ss_dssp GGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG
T ss_pred heEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 99999999999999999998765443322 233457889999999998889999999999999999999 9999876432
Q ss_pred cccchHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccC
Q 007668 514 EKGLNIVGWLNFLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVM 581 (594)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~~ 581 (594)
.. .. ... .... ....+...+..+.+++.+||+.||++|||+.|+++.|++++.
T Consensus 259 ~~---~~---~~~-~~~~--------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 311 (314)
T 2ivs_A 259 ER---LF---NLL-KTGH--------RMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311 (314)
T ss_dssp GG---HH---HHH-HTTC--------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HH---HH---HHh-hcCC--------cCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 21 11 111 1110 011122344679999999999999999999999999988654
No 61
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=2.1e-41 Score=359.31 Aligned_cols=251 Identities=26% Similarity=0.391 Sum_probs=206.0
Q ss_pred hcCCCccceeeeecceEEEEEEecCCcEEEEEeecccchhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCC-ceEEEEEc
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPT-SKLLIYDF 384 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~-~~~lv~e~ 384 (594)
.++|...+.||+|+||.||+|... ++.||||+++... ..+.|.+|++++++++||||+++++++.+.. ..++||||
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~ 268 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 268 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEEC
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEe
Confidence 457888899999999999999886 7899999998643 3567999999999999999999999987665 68999999
Q ss_pred cCCCchhhhhhhcCC-CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccCCce
Q 007668 385 LPGGSLDEALHERSE-QLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESH 463 (594)
Q Consensus 385 ~~~gsL~~~l~~~~~-~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~~~ 463 (594)
+++|+|.++++.... .+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++......
T Consensus 269 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~-- 343 (450)
T 1k9a_A 269 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-- 343 (450)
T ss_dssp CTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred cCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHhhEEECCCCCEEEeeCCCcccccccc--
Confidence 999999999987544 37999999999999999999995 499999999999999999999999999998543221
Q ss_pred eeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHHHHhcccccccccCCCCCC
Q 007668 464 ITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEG 542 (594)
Q Consensus 464 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 542 (594)
....+++.|+|||.+.+..++.++||||||+++|||++ |+.||......+ .. ........ ..
T Consensus 344 --~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~---~~---~~i~~~~~---------~~ 406 (450)
T 1k9a_A 344 --DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD---VV---PRVEKGYK---------MD 406 (450)
T ss_dssp -----CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT---HH---HHHHTTCC---------CC
T ss_pred --cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH---HH---HHHHcCCC---------CC
Confidence 22357889999999999999999999999999999998 999997643221 11 11111110 01
Q ss_pred CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccC
Q 007668 543 VQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVM 581 (594)
Q Consensus 543 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~~ 581 (594)
.+...+..+.+++.+||+.||++|||+.++++.|+....
T Consensus 407 ~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~ 445 (450)
T 1k9a_A 407 APDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRT 445 (450)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 123345779999999999999999999999999987543
No 62
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=1.4e-41 Score=346.23 Aligned_cols=260 Identities=16% Similarity=0.188 Sum_probs=208.4
Q ss_pred cCCCccceeeeecceEEEEEEe-cCCcEEEEEeecccchhhHHHHHHHHHHHhhC-CCCeeeeeeeEEeCCCceEEEEEc
Q 007668 307 ETLDDDHIIGSGGFGTVYKLAM-DDGNVFALKRIDKLNEGFDRFFERELEILGSI-KHRYLVNLRGYCNSPTSKLLIYDF 384 (594)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~ 384 (594)
++|...+.||+|+||.||+|.. .+++.||||.+..... .+.+.+|+++++++ +||||+++++++......++||||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~ 86 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLEL 86 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEEC
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEe
Confidence 4678889999999999999975 5789999999875432 34588999999999 999999999999999999999999
Q ss_pred cCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCc-----EEEeeccccccccc
Q 007668 385 LPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLE-----ARVSDFGLAKLLED 459 (594)
Q Consensus 385 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~-----~~l~Dfgl~~~~~~ 459 (594)
+ +++|.+++......+++..+..++.||+.||+|||+. +|+||||||+|||++.++. +||+|||+++....
T Consensus 87 ~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~ 162 (330)
T 2izr_A 87 L-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYID 162 (330)
T ss_dssp C-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBC
T ss_pred C-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeec
Confidence 9 9999999987667899999999999999999999954 9999999999999998887 99999999987654
Q ss_pred CCce------eeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccc
Q 007668 460 EESH------ITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQR 533 (594)
Q Consensus 460 ~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 (594)
.... ......||+.|+|||++.+..++.++||||||+++|||++|+.||........ ..............
T Consensus 163 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~---~~~~~~i~~~~~~~ 239 (330)
T 2izr_A 163 PETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTL---KERYQKIGDTKRAT 239 (330)
T ss_dssp TTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSH---HHHHHHHHHHHHHS
T ss_pred CCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccH---HHHHHHHHhhhccC
Confidence 3321 12346799999999999999999999999999999999999999976432211 11111111000000
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccC
Q 007668 534 EIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVM 581 (594)
Q Consensus 534 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~~ 581 (594)
. . .......+ .+.+++.+||+.||.+||++++|.+.|++...
T Consensus 240 ~-~----~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~ 281 (330)
T 2izr_A 240 P-I----EVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFD 281 (330)
T ss_dssp C-H----HHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHH
T ss_pred C-H----HHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHH
Confidence 0 0 00001122 79999999999999999999999999987644
No 63
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=9.6e-41 Score=346.23 Aligned_cols=252 Identities=26% Similarity=0.343 Sum_probs=208.6
Q ss_pred hcCCCccceeeeecceEEEEEEec-CCcEEEEEeecccchhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEEEEc
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDF 384 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~ 384 (594)
.+.|...+.||+|+||.||+|... +++.||+|.+..........+.+|++++.+++||||+++++++.+....++||||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 467889999999999999999765 6889999999876555566799999999999999999999999999999999999
Q ss_pred cCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEec--CCCcEEEeecccccccccCCc
Q 007668 385 LPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLD--GNLEARVSDFGLAKLLEDEES 462 (594)
Q Consensus 385 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~--~~~~~~l~Dfgl~~~~~~~~~ 462 (594)
+++|+|.+++......+++..+..++.||+.||+|||+ .+|+||||||+|||++ .++.+||+|||+++.......
T Consensus 130 ~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~ 206 (387)
T 1kob_A 130 LSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHE---HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI 206 (387)
T ss_dssp CCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSC
T ss_pred CCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccchHHeEEecCCCCceEEEecccceecCCCcc
Confidence 99999999998766679999999999999999999995 4999999999999997 457899999999987765432
Q ss_pred eeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCCCCCC
Q 007668 463 HITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEG 542 (594)
Q Consensus 463 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 542 (594)
.....||+.|+|||++.+..++.++||||||+++|||++|..||....... ......... ..+++ .
T Consensus 207 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~------~~~~i~~~~---~~~~~---~ 272 (387)
T 1kob_A 207 --VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLE------TLQNVKRCD---WEFDE---D 272 (387)
T ss_dssp --EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH------HHHHHHHCC---CCCCS---S
T ss_pred --eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHH------HHHHHHhCC---CCCCc---c
Confidence 234569999999999999999999999999999999999999997643211 111111110 00111 1
Q ss_pred CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 543 VQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 543 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
.....+..+.+++.+||+.||++|||+.|+++
T Consensus 273 ~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 304 (387)
T 1kob_A 273 AFSSVSPEAKDFIKNLLQKEPRKRLTVHDALE 304 (387)
T ss_dssp TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred ccccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence 11233467899999999999999999999986
No 64
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.3e-42 Score=353.05 Aligned_cols=266 Identities=26% Similarity=0.409 Sum_probs=202.6
Q ss_pred CCCccceeeeecceEEEEEEecC--C--cEEEEEeeccc-chhhHHHHHHHHHHHhhCCCCeeeeeeeEEeC-CCceEEE
Q 007668 308 TLDDDHIIGSGGFGTVYKLAMDD--G--NVFALKRIDKL-NEGFDRFFERELEILGSIKHRYLVNLRGYCNS-PTSKLLI 381 (594)
Q Consensus 308 ~~~~~~~lG~G~~g~Vy~~~~~~--~--~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~~lv 381 (594)
.|...+.||+|+||.||+|...+ + ..||+|.++.. .....+.+.+|+.++++++||||+++++++.+ ....++|
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 35566899999999999997642 2 36899988753 33446789999999999999999999998754 4577899
Q ss_pred EEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccCC
Q 007668 382 YDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEE 461 (594)
Q Consensus 382 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~ 461 (594)
|||+++|+|.++++.....+++..+..++.||++||+|||+ .+|+||||||+||+++.++.+||+|||+++......
T Consensus 170 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~ 246 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 246 (373)
T ss_dssp EECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred EECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHH---CCEecCccchheEEECCCCCEEEeeccccccccccc
Confidence 99999999999998777779999999999999999999995 499999999999999999999999999998664432
Q ss_pred ce---eeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHHHHhcccccccccC
Q 007668 462 SH---ITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLNFLISEDRQREIID 537 (594)
Q Consensus 462 ~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 537 (594)
.. ......+|+.|+|||.+.+..++.++||||||+++|||++ |.+||......+ ... ....... .
T Consensus 247 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~---~~~---~~~~~~~---~-- 315 (373)
T 3c1x_A 247 FDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD---ITV---YLLQGRR---L-- 315 (373)
T ss_dssp -----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSC---HHH---HHHTTCC---C--
T ss_pred cccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHH---HHH---HHHcCCC---C--
Confidence 21 1233457889999999999999999999999999999999 677776532211 111 1111110 0
Q ss_pred CCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccCCCCCcccccc
Q 007668 538 PNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVMTPCPSDFYDS 591 (594)
Q Consensus 538 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~~~~~~~~~~~~ 591 (594)
..+...+..+.+++.+||+.||++|||++|+++.|++.........|..-
T Consensus 316 ----~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~~~~~~~ 365 (373)
T 3c1x_A 316 ----LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHYVHV 365 (373)
T ss_dssp ----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSCCBCCC
T ss_pred ----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhccccceeec
Confidence 11122346789999999999999999999999999998887776665543
No 65
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=1.1e-41 Score=357.95 Aligned_cols=261 Identities=23% Similarity=0.349 Sum_probs=210.6
Q ss_pred HHHHHHhcCCCccceeeeecceEEEEEEecC-CcEEEEEeecccch---hhHHHHHHHHHHHhhCCCCeeeeeeeEEeCC
Q 007668 300 KDIIKKLETLDDDHIIGSGGFGTVYKLAMDD-GNVFALKRIDKLNE---GFDRFFERELEILGSIKHRYLVNLRGYCNSP 375 (594)
Q Consensus 300 ~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~ 375 (594)
.++....++|+..++||+|+||+||+|.... ++.||+|++.+... .....+.+|+.++..++||||+++++++.+.
T Consensus 67 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~ 146 (437)
T 4aw2_A 67 KQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDD 146 (437)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECS
T ss_pred hcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeC
Confidence 3344446789999999999999999998765 78899999975321 2233488999999999999999999999999
Q ss_pred CceEEEEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeeccccc
Q 007668 376 TSKLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAK 455 (594)
Q Consensus 376 ~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~ 455 (594)
...++||||+++|+|.+++......+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++
T Consensus 147 ~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~NILl~~~g~vkL~DFGla~ 223 (437)
T 4aw2_A 147 NNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQ---LHYVHRDIKPDNILMDMNGHIRLADFGSCL 223 (437)
T ss_dssp SEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred CEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHh---CCeEecccCHHHeeEcCCCCEEEcchhhhh
Confidence 99999999999999999998766789999999999999999999995 499999999999999999999999999998
Q ss_pred ccccCCceeeeeeecccCccCccccc-----cCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhccc
Q 007668 456 LLEDEESHITTIVAGTFGYLAPEYMQ-----SGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISED 530 (594)
Q Consensus 456 ~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 530 (594)
.............+||+.|+|||++. .+.++.++|||||||++|||++|+.||......+ .........
T Consensus 224 ~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~------~~~~i~~~~ 297 (437)
T 4aw2_A 224 KLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVE------TYGKIMNHK 297 (437)
T ss_dssp ECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHHHTHH
T ss_pred hcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhH------HHHhhhhcc
Confidence 77655544445568999999999987 4578999999999999999999999997643221 111111111
Q ss_pred ccccccCCCCCCCCHHHHHHHHHHHHHcccCCCCC--CCCHHHHHH
Q 007668 531 RQREIIDPNCEGVQSESLDALLAVATQCVSSSPDD--RPTMHRVVQ 574 (594)
Q Consensus 531 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPs~~ev~~ 574 (594)
. ...+ +......+..+.+|+.+|+..+|++ ||+++|+++
T Consensus 298 ~-~~~~----p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 298 E-RFQF----PTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp H-HCCC----CSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred c-cccC----CcccccCCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence 0 0011 1111123467899999999888888 999999986
No 66
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=2.3e-41 Score=337.90 Aligned_cols=254 Identities=23% Similarity=0.368 Sum_probs=205.2
Q ss_pred hcCCCccceeeeecceEEEEEEecC-C-------cEEEEEeecccchhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCc
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMDD-G-------NVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTS 377 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~~-~-------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~ 377 (594)
.++|...+.||+|+||.||+|.... + ..||+|.+........+.+.+|++++++++||||+++++++.+...
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE 86 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence 3577888999999999999997653 3 4799999987666667889999999999999999999999999999
Q ss_pred eEEEEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCc--------EEEe
Q 007668 378 KLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLE--------ARVS 449 (594)
Q Consensus 378 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~--------~~l~ 449 (594)
.++||||+++|+|.+++......+++..+..++.||+.||+|||+ .+|+||||||+||+++.++. +||+
T Consensus 87 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~ 163 (289)
T 4fvq_A 87 NILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEE---NTLIHGNVCAKNILLIREEDRKTGNPPFIKLS 163 (289)
T ss_dssp CEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEEECCBGGGTBCCEEEEC
T ss_pred CEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhh---CCeECCCcCcceEEEecCCcccccccceeeec
Confidence 999999999999999998766669999999999999999999995 49999999999999998877 9999
Q ss_pred ecccccccccCCceeeeeeecccCccCcccccc-CCCCccchhhhHHHHHHHHHhCCCC-CCcchhcccchHHHHHHHHh
Q 007668 450 DFGLAKLLEDEESHITTIVAGTFGYLAPEYMQS-GRATEKTDVYSFGVLVLEVLSGKRP-TDASFIEKGLNIVGWLNFLI 527 (594)
Q Consensus 450 Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p-~~~~~~~~~~~~~~~~~~~~ 527 (594)
|||++...... ....||+.|+|||.+.+ ..++.++||||||+++|||++|..| +...... .......
T Consensus 164 Dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~------~~~~~~~ 232 (289)
T 4fvq_A 164 DPGISITVLPK-----DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQ------RKLQFYE 232 (289)
T ss_dssp CCCSCTTTSCH-----HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH------HHHHHHH
T ss_pred cCcccccccCc-----cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchH------HHHHHhh
Confidence 99998765432 22457999999999987 6799999999999999999996554 4332111 1111111
Q ss_pred cccccccccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccCCCC
Q 007668 528 SEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVMTPC 584 (594)
Q Consensus 528 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~~~~~ 584 (594)
... .+.. ..+..+.+++.+||+.||++|||++|+++.|++...+..
T Consensus 233 ~~~----~~~~-------~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~~ 278 (289)
T 4fvq_A 233 DRH----QLPA-------PKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDL 278 (289)
T ss_dssp TTC----CCCC-------CSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC----
T ss_pred ccC----CCCC-------CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCC
Confidence 111 1111 112458899999999999999999999999998876543
No 67
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=7.2e-41 Score=344.09 Aligned_cols=251 Identities=26% Similarity=0.347 Sum_probs=204.4
Q ss_pred hcCCCccceeeeecceEEEEEEec-CCcEEEEEeecccchh------hHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCce
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNEG------FDRFFERELEILGSIKHRYLVNLRGYCNSPTSK 378 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~ 378 (594)
.+.|...+.||+|+||.||++... +|+.||+|.+...... ..+.+.+|+.++.+++||||+++++++.+....
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 356888999999999999999765 5899999999753321 346789999999999999999999999999999
Q ss_pred EEEEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCC----cEEEeecccc
Q 007668 379 LLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNL----EARVSDFGLA 454 (594)
Q Consensus 379 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~----~~~l~Dfgl~ 454 (594)
++||||+++|+|.+++.. ...+++..+..++.||+.||.|||+ .+|+||||||+||+++.++ .+||+|||++
T Consensus 91 ~lv~e~~~gg~L~~~l~~-~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a 166 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQ-KESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (361)
T ss_dssp EEEEECCCSCBHHHHHTT-CSCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCTTSSSCCEEECCCSSC
T ss_pred EEEEEcCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEeCCCCCccCEEEEecCCc
Confidence 999999999999999975 3579999999999999999999995 4999999999999998776 7999999999
Q ss_pred cccccCCceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhccccccc
Q 007668 455 KLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQRE 534 (594)
Q Consensus 455 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 (594)
........ .....||+.|+|||++.+..++.++||||+|+++|+|++|..||....... ......... .
T Consensus 167 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~------~~~~i~~~~---~ 235 (361)
T 2yab_A 167 HEIEDGVE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE------TLANITAVS---Y 235 (361)
T ss_dssp EECCTTCC--CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH------HHHHHHTTC---C
T ss_pred eEcCCCCc--cccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHhcC---C
Confidence 87654322 234579999999999999999999999999999999999999997643221 111111100 0
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 535 IIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 535 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
.+++ ......+..+.+++.+||+.||++|||+.|+++
T Consensus 236 ~~~~---~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 236 DFDE---EFFSQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp CCCH---HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CCCc---hhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0000 000123466899999999999999999999874
No 68
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.3e-41 Score=346.13 Aligned_cols=246 Identities=24% Similarity=0.402 Sum_probs=203.2
Q ss_pred hcCCCccceeeeecceEEEEEEe-cCCcEEEEEeecccc---hhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEE
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAM-DDGNVFALKRIDKLN---EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLI 381 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv 381 (594)
..+|...+.||+|+||.||+|.. .+++.||+|++.... ......+.+|+++++.++||||+++++++......++|
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 45788899999999999999986 578999999986521 22345789999999999999999999999999999999
Q ss_pred EEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccCC
Q 007668 382 YDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEE 461 (594)
Q Consensus 382 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~ 461 (594)
|||+ +|+|.+++... ..+++..+..++.||+.||.|||+. +|+||||||+||++++++.+||+|||++.......
T Consensus 88 ~E~~-~g~l~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~ 162 (336)
T 3h4j_B 88 IEYA-GGELFDYIVEK-KRMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN 162 (336)
T ss_dssp ECCC-CEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB
T ss_pred EECC-CCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceeccCCc
Confidence 9999 78999988764 5699999999999999999999965 99999999999999999999999999998765433
Q ss_pred ceeeeeeecccCccCccccccCCC-CccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCCCC
Q 007668 462 SHITTIVAGTFGYLAPEYMQSGRA-TEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNC 540 (594)
Q Consensus 462 ~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 540 (594)
. .....||+.|+|||++.+..+ ++++||||+|+++|+|++|+.||+....... ...+....
T Consensus 163 ~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~----------------~~~i~~~~ 224 (336)
T 3h4j_B 163 F--LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL----------------FKKVNSCV 224 (336)
T ss_dssp T--TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC----------------BCCCCSSC
T ss_pred c--cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH----------------HHHHHcCC
Confidence 2 234569999999999988775 7899999999999999999999976432211 00111111
Q ss_pred CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 541 EGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 541 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
...+...+..+.+++.+||+.||++|||++|+++
T Consensus 225 ~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~ 258 (336)
T 3h4j_B 225 YVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRR 258 (336)
T ss_dssp CCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred CCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 1122334567899999999999999999999986
No 69
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=2.1e-41 Score=339.75 Aligned_cols=264 Identities=27% Similarity=0.414 Sum_probs=208.1
Q ss_pred cCCCccceeeeecceEEEEEEecC----CcEEEEEeeccc-chhhHHHHHHHHHHHhhCCCCeeeeeeeEE-eCCCceEE
Q 007668 307 ETLDDDHIIGSGGFGTVYKLAMDD----GNVFALKRIDKL-NEGFDRFFERELEILGSIKHRYLVNLRGYC-NSPTSKLL 380 (594)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~-~~~~~~~l 380 (594)
.+|...+.||+|+||.||+|...+ ...+|+|.+... .....+.+.+|++++++++||||+++++++ ......++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 104 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence 357778999999999999997643 235899998753 334456789999999999999999999986 45567889
Q ss_pred EEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccC
Q 007668 381 IYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDE 460 (594)
Q Consensus 381 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~ 460 (594)
||||+++|+|.+++......+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.....
T Consensus 105 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 181 (298)
T 3f66_A 105 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 181 (298)
T ss_dssp EEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCG
T ss_pred EEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCchheEEECCCCCEEECccccccccccc
Confidence 999999999999998767779999999999999999999995 49999999999999999999999999999876543
Q ss_pred Cc---eeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHHHHhccccccccc
Q 007668 461 ES---HITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLNFLISEDRQREII 536 (594)
Q Consensus 461 ~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 536 (594)
.. .......||+.|+|||.+.+..++.++||||+|+++|||++ |.+||....... .. ....... ..
T Consensus 182 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~---~~---~~~~~~~--~~-- 251 (298)
T 3f66_A 182 EYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD---IT---VYLLQGR--RL-- 251 (298)
T ss_dssp GGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTT---HH---HHHHTTC--CC--
T ss_pred chhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHH---HH---HHHhcCC--CC--
Confidence 32 12234567889999999999999999999999999999999 555554432211 11 1111111 00
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccCCCCCccc
Q 007668 537 DPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVMTPCPSDF 588 (594)
Q Consensus 537 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~~~~~~~~~ 588 (594)
..+...+..+.+++.+||+.||++|||++|+++.|++.........|
T Consensus 252 -----~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~~~~y 298 (298)
T 3f66_A 252 -----LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHY 298 (298)
T ss_dssp -----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSCCSCC
T ss_pred -----CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhccCCC
Confidence 11122346799999999999999999999999999998876665544
No 70
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=6.3e-42 Score=340.23 Aligned_cols=257 Identities=27% Similarity=0.424 Sum_probs=210.4
Q ss_pred hcCCCccceeeeecceEEEEEEecCCcEEEEEeecccchhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEEEEcc
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDFL 385 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~ 385 (594)
.++|...+.||+|+||.||+|...++..||+|.+..... ..+.+.+|++++++++||||+++++++.+ ...++||||+
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~ 89 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYM 89 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECC
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcc-cHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEecC
Confidence 467888999999999999999998888999999876433 35678999999999999999999999864 4689999999
Q ss_pred CCCchhhhhhhcC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccCCcee
Q 007668 386 PGGSLDEALHERS-EQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHI 464 (594)
Q Consensus 386 ~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~~~~ 464 (594)
++++|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||++++++.++|+|||++..........
T Consensus 90 ~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 166 (279)
T 1qpc_A 90 ENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTA 166 (279)
T ss_dssp TTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEEC
T ss_pred CCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHhhEEEcCCCCEEECCCcccccccCccccc
Confidence 9999999997532 369999999999999999999995 499999999999999999999999999998776544333
Q ss_pred eeeeecccCccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHHHHhcccccccccCCCCCCC
Q 007668 465 TTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGV 543 (594)
Q Consensus 465 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 543 (594)
.....++..|+|||.+.+..++.++||||||+++|||++ |+.||......+ ......... .. ..
T Consensus 167 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~------~~~~~~~~~--~~-------~~ 231 (279)
T 1qpc_A 167 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE------VIQNLERGY--RM-------VR 231 (279)
T ss_dssp CTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH------HHHHHHTTC--CC-------CC
T ss_pred ccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHH------HHHHHhccc--CC-------CC
Confidence 334457889999999998889999999999999999999 899986532211 111111110 00 11
Q ss_pred CHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccCC
Q 007668 544 QSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVMT 582 (594)
Q Consensus 544 ~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~~~ 582 (594)
+...+..+.+++.+|++.||++|||++++++.|++....
T Consensus 232 ~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 270 (279)
T 1qpc_A 232 PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 270 (279)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHh
Confidence 223346799999999999999999999999999886543
No 71
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=2.4e-41 Score=339.72 Aligned_cols=262 Identities=26% Similarity=0.403 Sum_probs=201.6
Q ss_pred hcCCCccceeeeecceEEEEEEecCCcEEEEEeecccchhhHHHHHHHHHHHhh--CCCCeeeeeeeEEeC----CCceE
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGS--IKHRYLVNLRGYCNS----PTSKL 379 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~g~~~~----~~~~~ 379 (594)
.++|+..+.||+|+||+||+|.. +++.||||++.... ...+.+|.+++.. ++||||+++++++.. ....+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~ 82 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRD---EKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW 82 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEecccc---chhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence 35788999999999999999987 68999999986532 3455667776666 799999999998643 34578
Q ss_pred EEEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcC-----CCCeeeCCCCCCCeEecCCCcEEEeecccc
Q 007668 380 LIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDC-----SPRIIHRDIKSSNILLDGNLEARVSDFGLA 454 (594)
Q Consensus 380 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~-----~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~ 454 (594)
+||||+++|+|.++++. ..+++..+..++.||+.||+|||... +.+|+||||||+|||++.++.+||+|||++
T Consensus 83 lv~e~~~~g~L~~~l~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a 160 (301)
T 3q4u_A 83 LITHYHEMGSLYDYLQL--TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA 160 (301)
T ss_dssp EEECCCTTCBHHHHHTT--CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred EehhhccCCCHHHHHhh--cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCe
Confidence 99999999999999964 46999999999999999999999311 349999999999999999999999999999
Q ss_pred cccccCCcee---eeeeecccCccCccccccC------CCCccchhhhHHHHHHHHHhC----------CCCCCcchhcc
Q 007668 455 KLLEDEESHI---TTIVAGTFGYLAPEYMQSG------RATEKTDVYSFGVLVLEVLSG----------KRPTDASFIEK 515 (594)
Q Consensus 455 ~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~s~G~vl~elltg----------~~p~~~~~~~~ 515 (594)
+......... .....||+.|+|||++.+. .++.++||||||+++|||++| +.||.......
T Consensus 161 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~ 240 (301)
T 3q4u_A 161 VMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPND 240 (301)
T ss_dssp EEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred eecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCC
Confidence 8765443332 1234799999999999876 445799999999999999999 77775432221
Q ss_pred cchHHHHHHHHhcccccccccCCCCCC--CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 007668 516 GLNIVGWLNFLISEDRQREIIDPNCEG--VQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESE 579 (594)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~ 579 (594)
. ........... .. ..+..+. .....+..+.+++.+||+.||++|||++||++.|++.
T Consensus 241 ~-~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 241 P-SFEDMRKVVCV-DQ----QRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp C-CHHHHHHHHTT-SC----CCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred c-chhhhhHHHhc-cC----CCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 1 11111111111 11 1111111 2345678899999999999999999999999999863
No 72
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=1.2e-41 Score=345.32 Aligned_cols=252 Identities=24% Similarity=0.360 Sum_probs=201.9
Q ss_pred hcCCCccceeeeecceEEEEEEec-CCcEEEEEeecccc-hhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEEEE
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLN-EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYD 383 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e 383 (594)
.++|+..+.||+|+||.||+|... +++.||||++.... ....+.+.+|+.+++.++||||+++++++.+....++|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 467889999999999999999766 78999999986432 2234568899999999999999999999999999999999
Q ss_pred ccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccCCc-
Q 007668 384 FLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEES- 462 (594)
Q Consensus 384 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~~- 462 (594)
|+++|+|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||++..+.....
T Consensus 86 ~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 161 (323)
T 3tki_A 86 YCSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (323)
T ss_dssp CCTTEEGGGGSBTT-TBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred cCCCCcHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCccccccchHHEEEeCCCCEEEEEeeccceeccCCcc
Confidence 99999999999753 459999999999999999999995 4999999999999999999999999999986643322
Q ss_pred eeeeeeecccCccCccccccCCC-CccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCCCCC
Q 007668 463 HITTIVAGTFGYLAPEYMQSGRA-TEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCE 541 (594)
Q Consensus 463 ~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (594)
.......||+.|+|||++.+..+ +.++||||+|+++|||++|+.||........ ....+. .... . .
T Consensus 162 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~~~~---~~~~-----~----~ 228 (323)
T 3tki_A 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ-EYSDWK---EKKT-----Y----L 228 (323)
T ss_dssp CCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSH-HHHHHH---TTCT-----T----S
T ss_pred cccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHH-HHHHHh---cccc-----c----C
Confidence 22234679999999999987765 7899999999999999999999976432211 111110 0000 0 0
Q ss_pred CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 542 GVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 542 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
.........+.+|+.+||+.||++|||++|+++
T Consensus 229 ~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~ 261 (323)
T 3tki_A 229 NPWKKIDSAPLALLHKILVENPSARITIPDIKK 261 (323)
T ss_dssp TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CccccCCHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 011233467889999999999999999999975
No 73
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=2.3e-41 Score=334.63 Aligned_cols=253 Identities=28% Similarity=0.476 Sum_probs=195.5
Q ss_pred hcCCCccceeeeecceEEEEEEecCCcEEEEEeecccch----hhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEE
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNE----GFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLI 381 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv 381 (594)
.++|+..+.||+|+||.||+|... ++.||||+++.... ...+.+.+|+++++.++||||+++++++.+....++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 457888899999999999999875 88999999875322 2346789999999999999999999999999999999
Q ss_pred EEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecC--------CCcEEEeeccc
Q 007668 382 YDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDG--------NLEARVSDFGL 453 (594)
Q Consensus 382 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~--------~~~~~l~Dfgl 453 (594)
|||+++++|.+++.. ..+++..+..++.|++.||+|||+....+|+||||||+||+++. ++.++|+|||+
T Consensus 85 ~e~~~~~~L~~~~~~--~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~ 162 (271)
T 3dtc_A 85 MEFARGGPLNRVLSG--KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGL 162 (271)
T ss_dssp EECCTTEEHHHHHTS--SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC
T ss_pred EEcCCCCCHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCc
Confidence 999999999999863 56999999999999999999999751123999999999999985 67899999999
Q ss_pred ccccccCCceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccc
Q 007668 454 AKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQR 533 (594)
Q Consensus 454 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 (594)
+........ ....||+.|+|||.+.+..++.++||||||+++|+|++|+.||........ ...... ....
T Consensus 163 ~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~------~~~~~~-~~~~ 232 (271)
T 3dtc_A 163 AREWHRTTK---MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAV------AYGVAM-NKLA 232 (271)
T ss_dssp ----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHH------HHHHHT-SCCC
T ss_pred ccccccccc---cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH------HHhhhc-CCCC
Confidence 986554322 234689999999999999999999999999999999999999976422110 011111 1111
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 007668 534 EIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILES 578 (594)
Q Consensus 534 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~ 578 (594)
. ..+...+..+.+++.+||+.||++|||+.|+++.|++
T Consensus 233 ~-------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~ 270 (271)
T 3dtc_A 233 L-------PIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTT 270 (271)
T ss_dssp C-------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC
T ss_pred C-------CCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhc
Confidence 1 1122344679999999999999999999999999985
No 74
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=6.8e-42 Score=347.31 Aligned_cols=264 Identities=20% Similarity=0.357 Sum_probs=213.9
Q ss_pred HHHHHhcCCCccceeeeecceEEEEEEec------CCcEEEEEeecccc-hhhHHHHHHHHHHHhhCCCCeeeeeeeEEe
Q 007668 301 DIIKKLETLDDDHIIGSGGFGTVYKLAMD------DGNVFALKRIDKLN-EGFDRFFERELEILGSIKHRYLVNLRGYCN 373 (594)
Q Consensus 301 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~ 373 (594)
++....++|+..+.||+|+||.||+|... ++..||+|.+.... ......+.+|++++++++||||+++++++.
T Consensus 19 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~ 98 (322)
T 1p4o_A 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS 98 (322)
T ss_dssp TTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEEC
T ss_pred hhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEc
Confidence 33445678999999999999999999764 36789999997543 334557899999999999999999999999
Q ss_pred CCCceEEEEEccCCCchhhhhhhcC---------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCC
Q 007668 374 SPTSKLLIYDFLPGGSLDEALHERS---------EQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNL 444 (594)
Q Consensus 374 ~~~~~~lv~e~~~~gsL~~~l~~~~---------~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~ 444 (594)
+....++||||+++|+|.+++.... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++
T Consensus 99 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~~~~ 175 (322)
T 1p4o_A 99 QGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDF 175 (322)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTC
T ss_pred cCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEcCCC
Confidence 9999999999999999999997532 4579999999999999999999954 999999999999999999
Q ss_pred cEEEeecccccccccCCcee-eeeeecccCccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCCcchhcccchHHHH
Q 007668 445 EARVSDFGLAKLLEDEESHI-TTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGW 522 (594)
Q Consensus 445 ~~~l~Dfgl~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~ 522 (594)
.+||+|||++.......... .....||+.|+|||.+.+..++.++||||||+++|||++ |..||...... ..
T Consensus 176 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~------~~ 249 (322)
T 1p4o_A 176 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE------QV 249 (322)
T ss_dssp CEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHH------HH
T ss_pred eEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHH------HH
Confidence 99999999998665433221 223457889999999999999999999999999999999 88998653221 11
Q ss_pred HHHHhcccccccccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccCC
Q 007668 523 LNFLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVMT 582 (594)
Q Consensus 523 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~~~ 582 (594)
........ ....+...+..+.+++.+||+.||++|||+.|+++.|++.+..
T Consensus 250 ~~~~~~~~---------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~ 300 (322)
T 1p4o_A 250 LRFVMEGG---------LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 300 (322)
T ss_dssp HHHHHTTC---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCT
T ss_pred HHHHHcCC---------cCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhcc
Confidence 11111111 1112223446789999999999999999999999999987664
No 75
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=1.8e-41 Score=337.39 Aligned_cols=256 Identities=27% Similarity=0.380 Sum_probs=205.2
Q ss_pred hcCCCccceeeeecceEEEEEEecC----CcEEEEEeeccc-chhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEE
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMDD----GNVFALKRIDKL-NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLL 380 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l 380 (594)
.++|...+.||+|+||.||+|...+ +..||+|.+... .....+.+.+|++++++++||||+++++++.+ ...++
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~ 89 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWI 89 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEE
Confidence 4678889999999999999997643 235999998764 33446779999999999999999999999865 45689
Q ss_pred EEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccC
Q 007668 381 IYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDE 460 (594)
Q Consensus 381 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~ 460 (594)
||||+++++|.+++......+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.++|+|||++......
T Consensus 90 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 166 (281)
T 3cc6_A 90 IMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDE 166 (281)
T ss_dssp EEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEEEETTEEEECCCCGGGCC---
T ss_pred EEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCccceEEECCCCcEEeCccCCCcccccc
Confidence 999999999999998777779999999999999999999995 49999999999999999999999999999876654
Q ss_pred CceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHHHHhcccccccccCCC
Q 007668 461 ESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPN 539 (594)
Q Consensus 461 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (594)
.........+++.|+|||.+.+..++.++||||||+++|||++ |+.||....... ... .......
T Consensus 167 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~---~~~---~~~~~~~-------- 232 (281)
T 3cc6_A 167 DYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD---VIG---VLEKGDR-------- 232 (281)
T ss_dssp ------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG---HHH---HHHHTCC--------
T ss_pred cccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH---HHH---HHhcCCC--------
Confidence 4333344567889999999998999999999999999999998 999986532221 111 1111100
Q ss_pred CCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccc
Q 007668 540 CEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEV 580 (594)
Q Consensus 540 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~ 580 (594)
...+...+..+.+++.+||+.||++|||+.|+++.|++..
T Consensus 233 -~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~ 272 (281)
T 3cc6_A 233 -LPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVY 272 (281)
T ss_dssp -CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -CCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHH
Confidence 0011223467899999999999999999999999998754
No 76
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=7.9e-41 Score=333.72 Aligned_cols=252 Identities=30% Similarity=0.540 Sum_probs=203.0
Q ss_pred cCCCccceeeeecceEEEEEEec-CCcEEEEEeecccchhh-------HHHHHHHHHHHhhCCCCeeeeeeeEEeCCCce
Q 007668 307 ETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNEGF-------DRFFERELEILGSIKHRYLVNLRGYCNSPTSK 378 (594)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-------~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~ 378 (594)
++|+..+.||+|+||.||+|... +++.||+|++....... .+.+.+|++++++++||||+++++++.+..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-- 96 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-- 96 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--
Confidence 57888899999999999999774 78999999986432211 167899999999999999999999986654
Q ss_pred EEEEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCC--eeeCCCCCCCeEecCCCc-----EEEeec
Q 007668 379 LLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPR--IIHRDIKSSNILLDGNLE-----ARVSDF 451 (594)
Q Consensus 379 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~--ivH~Dlk~~NIll~~~~~-----~~l~Df 451 (594)
++||||+++|+|.+.+......+++..+..++.|++.||+|||+. + |+||||||+||+++.++. +||+||
T Consensus 97 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Df 173 (287)
T 4f0f_A 97 RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAKVADF 173 (287)
T ss_dssp EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEEECCC
T ss_pred eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEEeCCC
Confidence 799999999999999987777899999999999999999999954 7 999999999999987776 999999
Q ss_pred ccccccccCCceeeeeeecccCccCccccc--cCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcc
Q 007668 452 GLAKLLEDEESHITTIVAGTFGYLAPEYMQ--SGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISE 529 (594)
Q Consensus 452 gl~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 529 (594)
|+++.... ......||+.|+|||.+. ...++.++||||+|+++|||++|+.||....... ..........
T Consensus 174 g~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~----~~~~~~~~~~ 245 (287)
T 4f0f_A 174 GLSQQSVH----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK----IKFINMIREE 245 (287)
T ss_dssp TTCBCCSS----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCH----HHHHHHHHHS
T ss_pred Cccccccc----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccH----HHHHHHHhcc
Confidence 99975433 233456899999999983 4567899999999999999999999997543221 1111111111
Q ss_pred cccccccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 007668 530 DRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESE 579 (594)
Q Consensus 530 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~ 579 (594)
.... ..+...+..+.+++.+||+.||++|||++|+++.|++.
T Consensus 246 -~~~~-------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 246 -GLRP-------TIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp -CCCC-------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred -CCCC-------CCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 1111 12223446799999999999999999999999999863
No 77
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1.7e-41 Score=338.72 Aligned_cols=258 Identities=24% Similarity=0.390 Sum_probs=215.1
Q ss_pred HhcCCCccceeeeecceEEEEEEecC-CcEEEEEeecccchhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEEEE
Q 007668 305 KLETLDDDHIIGSGGFGTVYKLAMDD-GNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYD 383 (594)
Q Consensus 305 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e 383 (594)
..++|+..+.||+|+||.||+|.... +..||+|.+..... ..+.+.+|++++++++||||+++++++.+....++|||
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 89 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 89 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCST-HHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHH-HHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEE
Confidence 35678888999999999999998765 78899999876433 35678999999999999999999999999999999999
Q ss_pred ccCCCchhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccCCc
Q 007668 384 FLPGGSLDEALHER-SEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEES 462 (594)
Q Consensus 384 ~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~~ 462 (594)
|+++++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||++........
T Consensus 90 ~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 166 (288)
T 3kfa_A 90 FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY 166 (288)
T ss_dssp CCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSS
T ss_pred cCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceeccCCcc
Confidence 99999999999863 35599999999999999999999965 999999999999999999999999999988776555
Q ss_pred eeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHHHHhcccccccccCCCCC
Q 007668 463 HITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCE 541 (594)
Q Consensus 463 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (594)
.......+|+.|+|||.+.+..++.++||||+|+++|+|++ |..||........ . ...... .. .
T Consensus 167 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~---~---~~~~~~--~~-------~ 231 (288)
T 3kfa_A 167 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV---Y---ELLEKD--YR-------M 231 (288)
T ss_dssp EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH---H---HHHHTT--CC-------C
T ss_pred ccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH---H---HHHhcc--CC-------C
Confidence 55555667889999999999999999999999999999999 9999876432211 1 111110 00 0
Q ss_pred CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccC
Q 007668 542 GVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVM 581 (594)
Q Consensus 542 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~~ 581 (594)
..+...+..+.+++.+|++.||++|||++|+++.|++...
T Consensus 232 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~ 271 (288)
T 3kfa_A 232 ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 271 (288)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHH
Confidence 1122334679999999999999999999999999987644
No 78
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=3e-41 Score=340.14 Aligned_cols=254 Identities=26% Similarity=0.441 Sum_probs=198.2
Q ss_pred hcCCCccceeeeecceEEEEEEecCCcEEEEEeecccchhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEEEEcc
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDFL 385 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~ 385 (594)
.++|+..+.||+|+||.||++... ++.||+|++.... ..+.+.+|++++++++||||+++++++.+ ..++||||+
T Consensus 7 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~ 81 (307)
T 2eva_A 7 YKEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESES--ERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYA 81 (307)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSSTT--HHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECC
T ss_pred HhHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecChh--HHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcC
Confidence 356788899999999999999875 7889999987533 35678999999999999999999998874 479999999
Q ss_pred CCCchhhhhhhcCC--CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCc-EEEeecccccccccCCc
Q 007668 386 PGGSLDEALHERSE--QLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLE-ARVSDFGLAKLLEDEES 462 (594)
Q Consensus 386 ~~gsL~~~l~~~~~--~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~-~~l~Dfgl~~~~~~~~~ 462 (594)
++|+|.+++..... .+++..++.++.|+++||+|||+....+|+||||||+||+++.++. +||+|||++......
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~-- 159 (307)
T 2eva_A 82 EGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH-- 159 (307)
T ss_dssp TTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC---------
T ss_pred CCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc--
Confidence 99999999985432 4789999999999999999999642369999999999999998876 799999999765432
Q ss_pred eeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCCCCCC
Q 007668 463 HITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEG 542 (594)
Q Consensus 463 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 542 (594)
.....||+.|+|||++.+..++.++||||||+++|||++|+.||....... ......... .. ...
T Consensus 160 --~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~----~~~~~~~~~-~~--------~~~ 224 (307)
T 2eva_A 160 --MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPA----FRIMWAVHN-GT--------RPP 224 (307)
T ss_dssp -------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSH----HHHHHHHHT-TC--------CCC
T ss_pred --cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccH----HHHHHHHhc-CC--------CCC
Confidence 123458999999999999999999999999999999999999997532110 111111111 10 011
Q ss_pred CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccC
Q 007668 543 VQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVM 581 (594)
Q Consensus 543 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~~ 581 (594)
.....+..+.+++.+||+.||++|||++|+++.|+....
T Consensus 225 ~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 263 (307)
T 2eva_A 225 LIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMR 263 (307)
T ss_dssp CBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGG
T ss_pred cccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 112334678999999999999999999999999987543
No 79
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-40 Score=337.67 Aligned_cols=251 Identities=21% Similarity=0.312 Sum_probs=206.7
Q ss_pred hcCCCccceeeeecceEEEEEEec-CCcEEEEEeecccchhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEEEEc
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDF 384 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~ 384 (594)
.++|...+.||+|+||.||++... +++.+|+|.+.... .....+.+|+++++.++||||+++++++.+....++||||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 357888999999999999999765 57889999887543 3356788999999999999999999999999999999999
Q ss_pred cCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecC--CCcEEEeecccccccccCCc
Q 007668 385 LPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDG--NLEARVSDFGLAKLLEDEES 462 (594)
Q Consensus 385 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~--~~~~~l~Dfgl~~~~~~~~~ 462 (594)
+++|+|.+++......+++..+..++.||+.||+|||+ .+|+||||||+||+++. ++.+||+|||++.......
T Consensus 83 ~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~---~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~- 158 (321)
T 1tki_A 83 ISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHS---HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD- 158 (321)
T ss_dssp CCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC-
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC-
Confidence 99999999998766679999999999999999999995 49999999999999986 7899999999998775443
Q ss_pred eeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCCCCCC
Q 007668 463 HITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEG 542 (594)
Q Consensus 463 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 542 (594)
......||+.|+|||++.+..++.++||||+|+++|+|++|..||....... ........... ++. .
T Consensus 159 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~------~~~~i~~~~~~---~~~---~ 225 (321)
T 1tki_A 159 -NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQ------IIENIMNAEYT---FDE---E 225 (321)
T ss_dssp -EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHHHHTCCC---CCH---H
T ss_pred -ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHH------HHHHHHcCCCC---CCh---h
Confidence 2344678999999999998889999999999999999999999997643221 11111111100 000 0
Q ss_pred CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 543 VQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 543 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
.....+..+.+++.+||+.||++|||+.|+++
T Consensus 226 ~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~ 257 (321)
T 1tki_A 226 AFKEISIEAMDFVDRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp HHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred hhccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 00123467899999999999999999999987
No 80
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=2.5e-41 Score=341.59 Aligned_cols=260 Identities=26% Similarity=0.434 Sum_probs=212.4
Q ss_pred hcCCCccceeeeecceEEEEEEe------cCCcEEEEEeecccch-hhHHHHHHHHHHHhhC-CCCeeeeeeeEEeCCCc
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAM------DDGNVFALKRIDKLNE-GFDRFFERELEILGSI-KHRYLVNLRGYCNSPTS 377 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~ 377 (594)
.++|...+.||+|+||.||+|.. .+++.||+|++..... ...+.+.+|++++.++ +||||+++++++.+...
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 101 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 101 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence 46788899999999999999975 3467899999975432 3457799999999999 99999999999999999
Q ss_pred eEEEEEccCCCchhhhhhhcCC-----------------CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEe
Q 007668 378 KLLIYDFLPGGSLDEALHERSE-----------------QLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILL 440 (594)
Q Consensus 378 ~~lv~e~~~~gsL~~~l~~~~~-----------------~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll 440 (594)
.++||||+++|+|.+++..... .+++..+..++.||+.||+|||+ .+|+||||||+||++
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~ 178 (313)
T 1t46_A 102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNILL 178 (313)
T ss_dssp CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEE
T ss_pred cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCccceEEE
Confidence 9999999999999999986432 48999999999999999999995 499999999999999
Q ss_pred cCCCcEEEeecccccccccCCce-eeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCCcchhcccch
Q 007668 441 DGNLEARVSDFGLAKLLEDEESH-ITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLN 518 (594)
Q Consensus 441 ~~~~~~~l~Dfgl~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~ 518 (594)
+.++.+||+|||++......... ......||+.|+|||.+.+..++.++||||||+++|||++ |+.||........
T Consensus 179 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~-- 256 (313)
T 1t46_A 179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK-- 256 (313)
T ss_dssp ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHH--
T ss_pred cCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhH--
Confidence 99999999999999877654432 2234557889999999999999999999999999999999 9999876432210
Q ss_pred HHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccCC
Q 007668 519 IVGWLNFLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVMT 582 (594)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~~~ 582 (594)
.. ...... .... .+...+..+.+++.+||+.||++|||++|+++.|++.+..
T Consensus 257 ~~----~~~~~~-~~~~-------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 308 (313)
T 1t46_A 257 FY----KMIKEG-FRML-------SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE 308 (313)
T ss_dssp HH----HHHHHT-CCCC-------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HH----HHhccC-CCCC-------CcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 11 111111 1111 1122346789999999999999999999999999987643
No 81
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=4.1e-41 Score=332.59 Aligned_cols=253 Identities=23% Similarity=0.342 Sum_probs=204.4
Q ss_pred hcCCCccceeeeecceEEEEEEecCCcEEEEEeeccc--chhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCC--CceEEE
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKL--NEGFDRFFERELEILGSIKHRYLVNLRGYCNSP--TSKLLI 381 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~--~~~~lv 381 (594)
.++|...+.||+|+||.||+|... ++.||||++... .....+.+.+|++++++++||||+++++++.+. ...++|
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI 87 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence 467888999999999999999886 889999999753 334456799999999999999999999999877 778999
Q ss_pred EEccCCCchhhhhhhcCC-CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccC
Q 007668 382 YDFLPGGSLDEALHERSE-QLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDE 460 (594)
Q Consensus 382 ~e~~~~gsL~~~l~~~~~-~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~ 460 (594)
|||+++|+|.+++..... .+++..+..++.||+.||+|||+. ..+++||||||+||+++.++.++++|||++......
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~~ 166 (271)
T 3kmu_A 88 THWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTL-EPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSP 166 (271)
T ss_dssp EECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTS-SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSCT
T ss_pred ecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC-CCceecCCCccceEEEcCCcceeEEeccceeeeccc
Confidence 999999999999986543 589999999999999999999954 222999999999999999999999999887653332
Q ss_pred CceeeeeeecccCccCccccccCCCCc---cchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccC
Q 007668 461 ESHITTIVAGTFGYLAPEYMQSGRATE---KTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIID 537 (594)
Q Consensus 461 ~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 537 (594)
...||+.|+|||.+.+...+. ++||||||+++|||++|+.||....... ......... ..
T Consensus 167 ------~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~------~~~~~~~~~-~~---- 229 (271)
T 3kmu_A 167 ------GRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNME------IGMKVALEG-LR---- 229 (271)
T ss_dssp ------TCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHH------HHHHHHHSC-CC----
T ss_pred ------CccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHH------HHHHHHhcC-CC----
Confidence 235799999999998765444 8999999999999999999997542211 111111111 11
Q ss_pred CCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccc
Q 007668 538 PNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEV 580 (594)
Q Consensus 538 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~ 580 (594)
+ ..+...+..+.+++.+||+.||++|||++|+++.|++..
T Consensus 230 ~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~ 269 (271)
T 3kmu_A 230 P---TIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQ 269 (271)
T ss_dssp C---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred C---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence 1 112234467999999999999999999999999998754
No 82
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=1.7e-41 Score=346.35 Aligned_cols=267 Identities=26% Similarity=0.433 Sum_probs=212.2
Q ss_pred hcCCCccceeeeecceEEEEEEec--------CCcEEEEEeeccc-chhhHHHHHHHHHHHhhC-CCCeeeeeeeEEeCC
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMD--------DGNVFALKRIDKL-NEGFDRFFERELEILGSI-KHRYLVNLRGYCNSP 375 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~ 375 (594)
.++|...+.||+|+||.||+|... ++..||+|++... .....+.+.+|++++.++ +||||+++++++.+.
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 467888999999999999999763 5678999999754 333456789999999999 899999999999999
Q ss_pred CceEEEEEccCCCchhhhhhhcC---------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEe
Q 007668 376 TSKLLIYDFLPGGSLDEALHERS---------------EQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILL 440 (594)
Q Consensus 376 ~~~~lv~e~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll 440 (594)
...++||||+++|+|.+++.... ..+++..++.++.||+.||+|||+ .+|+||||||+||++
T Consensus 114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll 190 (334)
T 2pvf_A 114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLV 190 (334)
T ss_dssp SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEE
T ss_pred CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCccceEEE
Confidence 99999999999999999998643 248999999999999999999995 499999999999999
Q ss_pred cCCCcEEEeecccccccccCCcee-eeeeecccCccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCCcchhcccch
Q 007668 441 DGNLEARVSDFGLAKLLEDEESHI-TTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLN 518 (594)
Q Consensus 441 ~~~~~~~l~Dfgl~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~ 518 (594)
+.++.+||+|||++.......... .....+|+.|+|||++.+..++.++||||||+++|||++ |+.||......+
T Consensus 191 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--- 267 (334)
T 2pvf_A 191 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--- 267 (334)
T ss_dssp CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH---
T ss_pred cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHH---
Confidence 999999999999998765443222 233457889999999998889999999999999999999 999987542221
Q ss_pred HHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccCCCCCccccc
Q 007668 519 IVGWLNFLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVMTPCPSDFYD 590 (594)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~~~~~~~~~~~ 590 (594)
.......... ...+...+..+.+++.+||+.||++|||++|+++.|++.+......+|.+
T Consensus 268 ---~~~~~~~~~~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~~~~~~~ 327 (334)
T 2pvf_A 268 ---LFKLLKEGHR---------MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTNEEYLD 327 (334)
T ss_dssp ---HHHHHHHTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC------
T ss_pred ---HHHHHhcCCC---------CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccccCcccC
Confidence 1111111110 01122334678999999999999999999999999999876555555543
No 83
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.2e-41 Score=353.32 Aligned_cols=259 Identities=22% Similarity=0.340 Sum_probs=207.9
Q ss_pred HHHHHhcCCCccceeeeecceEEEEEEec-CCcEEEEEeecccc---hhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCC
Q 007668 301 DIIKKLETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLN---EGFDRFFERELEILGSIKHRYLVNLRGYCNSPT 376 (594)
Q Consensus 301 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~ 376 (594)
+.....++|+..+.||+|+||+||++... +|+.||+|++.+.. ....+.+.+|.+++..++||||+++++++.+..
T Consensus 55 ~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~ 134 (412)
T 2vd5_A 55 EVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDEN 134 (412)
T ss_dssp HHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSS
T ss_pred hccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCC
Confidence 33444678999999999999999999875 68999999997532 222345888999999999999999999999999
Q ss_pred ceEEEEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccc
Q 007668 377 SKLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKL 456 (594)
Q Consensus 377 ~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~ 456 (594)
..++||||+++|+|.+++......+++..+..++.||+.||+|||+ .+|+||||||+|||++.++++||+|||+++.
T Consensus 135 ~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~NILld~~g~vkL~DFGla~~ 211 (412)
T 2vd5_A 135 YLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHR---LGYVHRDIKPDNILLDRCGHIRLADFGSCLK 211 (412)
T ss_dssp EEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecccCHHHeeecCCCCEEEeechhhee
Confidence 9999999999999999998766689999999999999999999995 4999999999999999999999999999987
Q ss_pred cccCCceeeeeeecccCccCccccc-------cCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcc
Q 007668 457 LEDEESHITTIVAGTFGYLAPEYMQ-------SGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISE 529 (594)
Q Consensus 457 ~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 529 (594)
............+||+.|+|||++. +..++.++|||||||++|||++|+.||......+ ........
T Consensus 212 ~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~------~~~~i~~~ 285 (412)
T 2vd5_A 212 LRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAE------TYGKIVHY 285 (412)
T ss_dssp CCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHHHTH
T ss_pred ccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHH------HHHHHHhc
Confidence 7655444444568999999999987 3568999999999999999999999997643221 11111111
Q ss_pred cccccccCCCCCCCCHHHHHHHHHHHHHcccCCCCCC---CCHHHHHH
Q 007668 530 DRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDR---PTMHRVVQ 574 (594)
Q Consensus 530 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R---Ps~~ev~~ 574 (594)
... . ..+......+..+.+++.+||. +|++| |+++|+++
T Consensus 286 ~~~--~---~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 286 KEH--L---SLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp HHH--C---CCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred ccC--c---CCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 000 0 0111112234678999999999 99998 58888875
No 84
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=6.2e-41 Score=347.73 Aligned_cols=250 Identities=22% Similarity=0.363 Sum_probs=199.3
Q ss_pred hcCCCccceeeeecceEEEEEEec-CCcEEEEEeecccc---hhhHHHHHHHHHHHhhC-CCCeeeeeeeEEeCCCceEE
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLN---EGFDRFFERELEILGSI-KHRYLVNLRGYCNSPTSKLL 380 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~l 380 (594)
.++|+..+.||+|+||+||+|... +++.||+|++++.. ....+.+.+|..++.++ +||||+++++++.+....++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 567889999999999999999876 57889999997532 22234578899999887 89999999999999999999
Q ss_pred EEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccC
Q 007668 381 IYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDE 460 (594)
Q Consensus 381 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~ 460 (594)
||||+++|+|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++++||+|||+++.....
T Consensus 131 V~E~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH~---~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 206 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 206 (396)
T ss_dssp EEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EEEcCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH---CCEEeccCCHHHEEECCCCCEEEeecceeeecccC
Confidence 99999999999999764 569999999999999999999995 49999999999999999999999999999863322
Q ss_pred CceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhccc--chHHHHHHHHhcccccccccCC
Q 007668 461 ESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKG--LNIVGWLNFLISEDRQREIIDP 538 (594)
Q Consensus 461 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 538 (594)
. ......+||+.|+|||++.+..++.++||||+||++|||++|+.||........ ..........+.....
T Consensus 207 ~-~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~------ 279 (396)
T 4dc2_A 207 G-DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI------ 279 (396)
T ss_dssp T-CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCC------
T ss_pred C-CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhcccc------
Confidence 2 223456799999999999999999999999999999999999999965322111 1111111111111110
Q ss_pred CCCCCCHHHHHHHHHHHHHcccCCCCCCCCH
Q 007668 539 NCEGVQSESLDALLAVATQCVSSSPDDRPTM 569 (594)
Q Consensus 539 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~ 569 (594)
..+...+..+.+|+.+||+.||++||++
T Consensus 280 ---~~p~~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 280 ---RIPRSLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp ---CCCTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred ---CCCCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence 1122344678999999999999999996
No 85
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=2.1e-41 Score=344.95 Aligned_cols=249 Identities=22% Similarity=0.370 Sum_probs=197.9
Q ss_pred hcCCCccceeeeecceEEEEEEec-CCcEEEEEeeccc-chhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCc------
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKL-NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTS------ 377 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~------ 377 (594)
.++|+..+.||+|+||.||+|... +|+.||||++... .....+.+.+|++++++++||||+++++++.+...
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 457888999999999999999876 7899999999753 33456789999999999999999999999855432
Q ss_pred ---------------------------------------------------eEEEEEccCCCchhhhhhhcC--CCCCHH
Q 007668 378 ---------------------------------------------------KLLIYDFLPGGSLDEALHERS--EQLDWD 404 (594)
Q Consensus 378 ---------------------------------------------------~~lv~e~~~~gsL~~~l~~~~--~~l~~~ 404 (594)
.++||||+++|+|.+++.... ...++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~ 164 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG 164 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence 789999999999999998643 336777
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccCCc-----------eeeeeeecccC
Q 007668 405 ARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEES-----------HITTIVAGTFG 473 (594)
Q Consensus 405 ~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~~-----------~~~~~~~gt~~ 473 (594)
.++.++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++....... .......||+.
T Consensus 165 ~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 241 (332)
T 3qd2_B 165 VCLHIFIQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKL 241 (332)
T ss_dssp HHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGG
T ss_pred HHHHHHHHHHHHHHHHHh---CCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcC
Confidence 899999999999999995 4999999999999999999999999999987765422 11233569999
Q ss_pred ccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHH
Q 007668 474 YLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQSESLDALLA 553 (594)
Q Consensus 474 y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 553 (594)
|+|||++.+..++.++||||||+++|||++|..|+..... .... ......+.........+.+
T Consensus 242 y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~~--------~~~~---------~~~~~~~~~~~~~~~~~~~ 304 (332)
T 3qd2_B 242 YMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVR--------IITD---------VRNLKFPLLFTQKYPQEHM 304 (332)
T ss_dssp GSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHH--------HHHH---------HHTTCCCHHHHHHCHHHHH
T ss_pred ccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHHH--------HHHH---------hhccCCCcccccCChhHHH
Confidence 9999999999999999999999999999998877432110 0000 0011111122344567889
Q ss_pred HHHHcccCCCCCCCCHHHHHH
Q 007668 554 VATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 554 l~~~cl~~dP~~RPs~~ev~~ 574 (594)
++.+||+.||++|||++|+++
T Consensus 305 li~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 305 MVQDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp HHHHHHCSSGGGSCCHHHHHH
T ss_pred HHHHHccCCCCcCCCHHHHhh
Confidence 999999999999999999985
No 86
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=1.2e-41 Score=348.95 Aligned_cols=249 Identities=23% Similarity=0.363 Sum_probs=200.3
Q ss_pred HhcCCCccceeeeecceEEEEEEec-CCcEEEEEeeccc---chhhHHHHHHHHHHHhhC-CCCeeeeeeeEEeCCCceE
Q 007668 305 KLETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKL---NEGFDRFFERELEILGSI-KHRYLVNLRGYCNSPTSKL 379 (594)
Q Consensus 305 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~ 379 (594)
..++|+..+.||+|+||.||+|... +++.||+|++++. .....+.+.+|.+++..+ +||||+++++++.+....+
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 100 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF 100 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEE
Confidence 3578999999999999999999765 5899999999753 233456688899999988 6999999999999999999
Q ss_pred EEEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeeccccccccc
Q 007668 380 LIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLED 459 (594)
Q Consensus 380 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~ 459 (594)
+||||+++|+|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++++||+|||+++....
T Consensus 101 lv~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~ 176 (353)
T 3txo_A 101 FVMEFVNGGDLMFHIQKS-RRFDEARARFYAAEIISALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIC 176 (353)
T ss_dssp EEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred EEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH---CCCcccCCCHHHEEECCCCCEEEccccceeeccc
Confidence 999999999999999764 569999999999999999999995 4999999999999999999999999999985433
Q ss_pred CCceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCCC
Q 007668 460 EESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPN 539 (594)
Q Consensus 460 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (594)
.. ......+||+.|+|||++.+..++.++||||+|+++|||++|+.||......+ ..........
T Consensus 177 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~------~~~~i~~~~~-------- 241 (353)
T 3txo_A 177 NG-VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDD------LFEAILNDEV-------- 241 (353)
T ss_dssp ----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHCCC--------
T ss_pred CC-ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHH------HHHHHHcCCC--------
Confidence 22 22345679999999999998899999999999999999999999997643221 1111111110
Q ss_pred CCCCCHHHHHHHHHHHHHcccCCCCCCCCH------HHHHH
Q 007668 540 CEGVQSESLDALLAVATQCVSSSPDDRPTM------HRVVQ 574 (594)
Q Consensus 540 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~------~ev~~ 574 (594)
..+......+.+++.+||+.||++||++ +|+++
T Consensus 242 --~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 242 --VYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp --CCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred --CCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 0112234678999999999999999998 66654
No 87
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.5e-41 Score=342.83 Aligned_cols=258 Identities=27% Similarity=0.447 Sum_probs=203.2
Q ss_pred cCCCccceeeeecceEEEEEEecC-----CcEEEEEeeccc-chhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEE
Q 007668 307 ETLDDDHIIGSGGFGTVYKLAMDD-----GNVFALKRIDKL-NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLL 380 (594)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~~-----~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l 380 (594)
++|...+.||+|+||.||+|.... +..||+|.++.. .......+.+|++++++++||||+++++++.+....++
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 123 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI 123 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence 356667899999999999997653 235999999753 33345678999999999999999999999999999999
Q ss_pred EEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccC
Q 007668 381 IYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDE 460 (594)
Q Consensus 381 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~ 460 (594)
||||+++|+|.+++......+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 124 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~ 200 (333)
T 1mqb_A 124 ITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 200 (333)
T ss_dssp EEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC-------
T ss_pred EEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcchhhccc
Confidence 9999999999999987777899999999999999999999964 9999999999999999999999999999876543
Q ss_pred Cce--eeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHHHHhcccccccccC
Q 007668 461 ESH--ITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLNFLISEDRQREIID 537 (594)
Q Consensus 461 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 537 (594)
... ......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||...... ...........
T Consensus 201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~------~~~~~~~~~~~------ 268 (333)
T 1mqb_A 201 PEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH------EVMKAINDGFR------ 268 (333)
T ss_dssp ----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH------HHHHHHHTTCC------
T ss_pred cccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHH------HHHHHHHCCCc------
Confidence 221 1222346789999999999999999999999999999999 99998653221 11111111100
Q ss_pred CCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccCC
Q 007668 538 PNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVMT 582 (594)
Q Consensus 538 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~~~ 582 (594)
...+...+..+.+++.+||+.||++||++.++++.|++....
T Consensus 269 ---~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~ 310 (333)
T 1mqb_A 269 ---LPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA 310 (333)
T ss_dssp ---CCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred ---CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 011223446789999999999999999999999999886544
No 88
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=1.1e-41 Score=368.88 Aligned_cols=261 Identities=27% Similarity=0.427 Sum_probs=213.9
Q ss_pred HhcCCCccceeeeecceEEEEEEecCCcEEEEEeecccchhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEEEEc
Q 007668 305 KLETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDF 384 (594)
Q Consensus 305 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~ 384 (594)
..++|...+.||+|+||.||+|.+.++..||||+++.... ..+.|.+|+++|++++||||+++++++.+ ...++||||
T Consensus 265 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~ 342 (535)
T 2h8h_A 265 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY 342 (535)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECC
T ss_pred chhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeeh
Confidence 3567888899999999999999999888999999986443 35679999999999999999999999876 678999999
Q ss_pred cCCCchhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccCCce
Q 007668 385 LPGGSLDEALHER-SEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESH 463 (594)
Q Consensus 385 ~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~~~ 463 (594)
+++|+|.++++.. ...+++..++.|+.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++........
T Consensus 343 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 419 (535)
T 2h8h_A 343 MSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 419 (535)
T ss_dssp CTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHH
T ss_pred hcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCcee
Confidence 9999999999853 3569999999999999999999995 49999999999999999999999999999876543222
Q ss_pred eeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHHHHhcccccccccCCCCCC
Q 007668 464 ITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEG 542 (594)
Q Consensus 464 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 542 (594)
......++..|+|||.+.+..++.++||||||+++|||++ |+.||......+ .......... . .
T Consensus 420 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~------~~~~i~~~~~--~-------~ 484 (535)
T 2h8h_A 420 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE------VLDQVERGYR--M-------P 484 (535)
T ss_dssp TTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHH------HHHHHHTTCC--C-------C
T ss_pred cccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH------HHHHHHcCCC--C-------C
Confidence 2223446789999999999999999999999999999999 999987542211 1111111110 0 1
Q ss_pred CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccCCCCC
Q 007668 543 VQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVMTPCP 585 (594)
Q Consensus 543 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~~~~~~ 585 (594)
.+...+..+.+|+.+||+.||++|||+++|++.|+.......|
T Consensus 485 ~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~~ 527 (535)
T 2h8h_A 485 CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 527 (535)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCCSC
T ss_pred CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhccCc
Confidence 1223446789999999999999999999999999998776554
No 89
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.5e-40 Score=337.79 Aligned_cols=249 Identities=27% Similarity=0.353 Sum_probs=203.4
Q ss_pred cCCCccceeeeecceEEEEEEec-CCcEEEEEeecccch------hhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceE
Q 007668 307 ETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNE------GFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKL 379 (594)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 379 (594)
+.|...+.||+|+||.||++... +|+.||+|.+..... ...+.+.+|++++++++||||+++++++.+....+
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 90 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 90 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 46788899999999999999775 589999999875322 13567999999999999999999999999999999
Q ss_pred EEEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCC----cEEEeeccccc
Q 007668 380 LIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNL----EARVSDFGLAK 455 (594)
Q Consensus 380 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~----~~~l~Dfgl~~ 455 (594)
+||||+++|+|.+++.. ...+++..+..++.||+.||.|||+ .+|+||||||+||+++.++ .+||+|||++.
T Consensus 91 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~ 166 (326)
T 2y0a_A 91 LILELVAGGELFDFLAE-KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166 (326)
T ss_dssp EEEECCCSCBHHHHHTT-SSCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred EEEEcCCCCCHHHHHHh-cCCcCHHHHHHHHHHHHHHHHHHHH---CCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCe
Confidence 99999999999999975 3569999999999999999999995 4999999999999999877 89999999998
Q ss_pred ccccCCceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccc
Q 007668 456 LLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREI 535 (594)
Q Consensus 456 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 535 (594)
....... .....||+.|+|||++.+..++.++||||||+++|+|++|..||........ ........
T Consensus 167 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~------~~~~~~~~----- 233 (326)
T 2y0a_A 167 KIDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET------LANVSAVN----- 233 (326)
T ss_dssp ECCTTSC--CCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHH------HHHHHHTC-----
T ss_pred ECCCCCc--cccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH------HHHHHhcC-----
Confidence 7654322 2345699999999999989999999999999999999999999975432211 11111000
Q ss_pred cCCCCC-CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 536 IDPNCE-GVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 536 ~~~~~~-~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
.... ......+..+.+++.+||+.||++|||++|+++
T Consensus 234 --~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 234 --YEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp --CCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred --CCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 0000 000122356889999999999999999999986
No 90
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=4e-41 Score=345.05 Aligned_cols=274 Identities=18% Similarity=0.201 Sum_probs=205.6
Q ss_pred cCCCccceeeeecceEEEEEEec----CCcEEEEEeecccchh-----------hHHHHHHHHHHHhhCCCCeeeeeeeE
Q 007668 307 ETLDDDHIIGSGGFGTVYKLAMD----DGNVFALKRIDKLNEG-----------FDRFFERELEILGSIKHRYLVNLRGY 371 (594)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~niv~l~g~ 371 (594)
++|...+.||+|+||.||+|... ++..+|+|++...... ....+.+|+..+..++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 46888899999999999999876 5788999998754321 12346678889999999999999999
Q ss_pred EeC----CCceEEEEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCC--c
Q 007668 372 CNS----PTSKLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNL--E 445 (594)
Q Consensus 372 ~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~--~ 445 (594)
+.. ....++||||+ +++|.+++.... .+++..++.++.||+.||+|||+ .+|+||||||+||+++.++ .
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~ 191 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQNG-TFKKSTVLQLGIRMLDVLEYIHE---NEYVHGDIKAANLLLGYKNPDQ 191 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBGGG-BCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEESSSTTS
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCcCHHHEEEccCCCCc
Confidence 877 67789999999 999999997643 79999999999999999999995 4999999999999999777 9
Q ss_pred EEEeecccccccccCCce------eeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchH
Q 007668 446 ARVSDFGLAKLLEDEESH------ITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNI 519 (594)
Q Consensus 446 ~~l~Dfgl~~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~ 519 (594)
+||+|||+++.+...... ......||+.|+|||++.+..++.++||||||+++|||++|+.||........ .
T Consensus 192 ~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~--~ 269 (345)
T 2v62_A 192 VYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPV--A 269 (345)
T ss_dssp EEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHH--H
T ss_pred EEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccH--H
Confidence 999999999876533211 11345789999999999999999999999999999999999999965322111 0
Q ss_pred HHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccCCCCCccccc
Q 007668 520 VGWLNFLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVMTPCPSDFYD 590 (594)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~~~~~~~~~~~ 590 (594)
................ ..... ....+..+.+++.+||+.||++|||+++|++.|++......+.|+-.
T Consensus 270 ~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~d~~~ 337 (345)
T 2v62_A 270 VQTAKTNLLDELPQSV-LKWAP--SGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGIPLGPLDFST 337 (345)
T ss_dssp HHHHHHHHHHTTTHHH-HHHSC--TTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCCCCCCCCCCC
T ss_pred HHHHHHhhcccccHHH-Hhhcc--ccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCCcccCCCccc
Confidence 1111111100000000 00000 01234679999999999999999999999999999887776666543
No 91
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.2e-41 Score=336.84 Aligned_cols=264 Identities=26% Similarity=0.395 Sum_probs=208.7
Q ss_pred CCCccceeeeecceEEEEEEecC-C---cEEEEEeecccch-hhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCce-EEE
Q 007668 308 TLDDDHIIGSGGFGTVYKLAMDD-G---NVFALKRIDKLNE-GFDRFFERELEILGSIKHRYLVNLRGYCNSPTSK-LLI 381 (594)
Q Consensus 308 ~~~~~~~lG~G~~g~Vy~~~~~~-~---~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-~lv 381 (594)
.|...+.||+|+||.||+|...+ + ..+|+|.+..... ...+.+.+|++++++++||||+++++++.+.... ++|
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 34556899999999999997543 2 3799999876433 3456789999999999999999999999776665 899
Q ss_pred EEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccCC
Q 007668 382 YDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEE 461 (594)
Q Consensus 382 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~ 461 (594)
+||+.+|+|.+++......+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 102 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 178 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDRE 178 (298)
T ss_dssp ECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGG
T ss_pred EecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCcccccCCc
Confidence 999999999999987677899999999999999999999964 99999999999999999999999999998654432
Q ss_pred c---eeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCC
Q 007668 462 S---HITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDP 538 (594)
Q Consensus 462 ~---~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 538 (594)
. .......+++.|+|||.+.+..++.++||||||+++|+|++|..|+...... .... .......
T Consensus 179 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~--~~~~---~~~~~~~-------- 245 (298)
T 3pls_A 179 YYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP--FDLT---HFLAQGR-------- 245 (298)
T ss_dssp GGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCG--GGHH---HHHHTTC--------
T ss_pred ccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCH--HHHH---HHhhcCC--------
Confidence 1 1223346789999999999999999999999999999999966654322111 1111 1111111
Q ss_pred CCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccCCCCCccc
Q 007668 539 NCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVMTPCPSDF 588 (594)
Q Consensus 539 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~~~~~~~~~ 588 (594)
....+...+..+.+++.+||+.||++|||++++++.|++.........|
T Consensus 246 -~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~~~~ 294 (298)
T 3pls_A 246 -RLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLGDHY 294 (298)
T ss_dssp -CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCSCCB
T ss_pred -CCCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhccch
Confidence 0111223346789999999999999999999999999998776655544
No 92
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=7.9e-41 Score=334.66 Aligned_cols=262 Identities=21% Similarity=0.322 Sum_probs=201.7
Q ss_pred cCCCccceeeeecceEEEEEEec-CCcEEEEEeeccc--chhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEEEE
Q 007668 307 ETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKL--NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYD 383 (594)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e 383 (594)
++|+..+.||+|+||+||+|... +++.||+|++... .......+.+|++++++++||||+++++++.+....++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 57888899999999999999875 5899999999743 33345678899999999999999999999999999999999
Q ss_pred ccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccCCce
Q 007668 384 FLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESH 463 (594)
Q Consensus 384 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~~~ 463 (594)
|+++ ++.+.+......+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 82 ~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 156 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVR- 156 (292)
T ss_dssp CCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCS-
T ss_pred cCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCCccc-
Confidence 9965 67776666567799999999999999999999954 999999999999999999999999999987653322
Q ss_pred eeeeeecccCccCccccccCC-CCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcc--cccc---c---
Q 007668 464 ITTIVAGTFGYLAPEYMQSGR-ATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISE--DRQR---E--- 534 (594)
Q Consensus 464 ~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~---~--- 534 (594)
......||+.|+|||++.+.. ++.++||||+|+++|||++|..|+........ ............ .... .
T Consensus 157 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~ 235 (292)
T 3o0g_A 157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDD-QLKRIFRLLGTPTEEQWPSMTKLPD 235 (292)
T ss_dssp CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHH-HHHHHHHHHCCCCTTTCTTGGGSTT
T ss_pred cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHH-HHHHHHHHhCCCChhhhhhhccccc
Confidence 223456899999999997765 79999999999999999999888543211100 011111100000 0000 0
Q ss_pred -------ccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 535 -------IIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 535 -------~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
.............+..+.+++.+||+.||++|||++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 236 YKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp CCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 0000111122345577899999999999999999999875
No 93
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=1e-40 Score=344.99 Aligned_cols=248 Identities=23% Similarity=0.315 Sum_probs=199.5
Q ss_pred CccceeeeecceEEEEEEec-CCcEEEEEeecccchhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEEEEccCCC
Q 007668 310 DDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDFLPGG 388 (594)
Q Consensus 310 ~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~g 388 (594)
...+.||+|+||.||+|... +|+.||+|+++.......+.+.+|++++.+++||||+++++++.+....++||||++++
T Consensus 92 ~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~ 171 (373)
T 2x4f_A 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGG 171 (373)
T ss_dssp EEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred ecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCC
Confidence 34578999999999999764 68999999998766556678999999999999999999999999999999999999999
Q ss_pred chhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEe--cCCCcEEEeecccccccccCCceeee
Q 007668 389 SLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILL--DGNLEARVSDFGLAKLLEDEESHITT 466 (594)
Q Consensus 389 sL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll--~~~~~~~l~Dfgl~~~~~~~~~~~~~ 466 (594)
+|.+++......+++..+..++.||+.||+|||+ .+|+||||||+|||+ +.++.+||+|||+++....... ..
T Consensus 172 ~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~--~~ 246 (373)
T 2x4f_A 172 ELFDRIIDESYNLTELDTILFMKQICEGIRHMHQ---MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK--LK 246 (373)
T ss_dssp EEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB--CC
T ss_pred cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc--cc
Confidence 9999998766679999999999999999999995 499999999999999 5678999999999987654332 23
Q ss_pred eeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCCCCCCCCHH
Q 007668 467 IVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQSE 546 (594)
Q Consensus 467 ~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (594)
...||+.|+|||++.+..++.++||||||+++|||++|+.||....... .......... ..... ....
T Consensus 247 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~------~~~~i~~~~~--~~~~~----~~~~ 314 (373)
T 2x4f_A 247 VNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAE------TLNNILACRW--DLEDE----EFQD 314 (373)
T ss_dssp CCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHHHHTCC--CSCSG----GGTT
T ss_pred cccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHhccC--CCChh----hhcc
Confidence 3468999999999998899999999999999999999999997643221 1111111110 00000 1112
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 547 SLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 547 ~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
.+..+.+++.+||+.||++|||++|+++
T Consensus 315 ~~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 315 ISEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp SCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred CCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 3467899999999999999999999986
No 94
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=1.7e-41 Score=346.09 Aligned_cols=262 Identities=23% Similarity=0.378 Sum_probs=210.6
Q ss_pred HHHHhcCCCccceeeeecceEEEEEEecC------CcEEEEEeecccc-hhhHHHHHHHHHHHhhC-CCCeeeeeeeEEe
Q 007668 302 IIKKLETLDDDHIIGSGGFGTVYKLAMDD------GNVFALKRIDKLN-EGFDRFFERELEILGSI-KHRYLVNLRGYCN 373 (594)
Q Consensus 302 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~ 373 (594)
.....++|...+.||+|+||.||+|.... ...||+|.+.... ....+.+.+|++++.++ +||||+++++++.
T Consensus 41 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 120 (333)
T 2i1m_A 41 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACT 120 (333)
T ss_dssp GBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred ccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence 33445788889999999999999998643 2479999997643 33456789999999999 8999999999999
Q ss_pred CCCceEEEEEccCCCchhhhhhhc-------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEe
Q 007668 374 SPTSKLLIYDFLPGGSLDEALHER-------------SEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILL 440 (594)
Q Consensus 374 ~~~~~~lv~e~~~~gsL~~~l~~~-------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll 440 (594)
+....++||||+++|+|.+++... ...+++..+..++.||+.||+|||+ .+|+||||||+||++
T Consensus 121 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~ 197 (333)
T 2i1m_A 121 HGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLAS---KNCIHRDVAARNVLL 197 (333)
T ss_dssp SSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGCEE
T ss_pred cCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhc---CCcccCCcccceEEE
Confidence 999999999999999999999753 2458999999999999999999995 499999999999999
Q ss_pred cCCCcEEEeecccccccccCCce-eeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCCcchhcccch
Q 007668 441 DGNLEARVSDFGLAKLLEDEESH-ITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLN 518 (594)
Q Consensus 441 ~~~~~~~l~Dfgl~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~ 518 (594)
+.++.+||+|||++......... ......||+.|+|||.+.+..++.++||||||+++|||++ |..||....... .
T Consensus 198 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~--~ 275 (333)
T 2i1m_A 198 TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS--K 275 (333)
T ss_dssp EGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH--H
T ss_pred CCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH--H
Confidence 99999999999999876543332 2234567889999999999999999999999999999999 999987542211 0
Q ss_pred HHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccc
Q 007668 519 IVGWLNFLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEV 580 (594)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~ 580 (594)
. ....... ... . .+...+..+.+++.+||+.||++|||++|+++.|++..
T Consensus 276 ~----~~~~~~~-~~~----~---~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~ 325 (333)
T 2i1m_A 276 F----YKLVKDG-YQM----A---QPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQA 325 (333)
T ss_dssp H----HHHHHHT-CCC----C---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred H----HHHHhcC-CCC----C---CCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHH
Confidence 1 1111111 000 0 11122467899999999999999999999999998754
No 95
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.7e-41 Score=335.42 Aligned_cols=256 Identities=25% Similarity=0.406 Sum_probs=207.9
Q ss_pred cCCCccc-eeeeecceEEEEEEec---CCcEEEEEeeccc-chhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEE
Q 007668 307 ETLDDDH-IIGSGGFGTVYKLAMD---DGNVFALKRIDKL-NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLI 381 (594)
Q Consensus 307 ~~~~~~~-~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv 381 (594)
++|...+ .||+|+||.||+|... ++..||+|+++.. .....+.+.+|++++.+++||||+++++++. ....++|
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~lv 87 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ-AEALMLV 87 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEec-CCCcEEE
Confidence 3444555 8999999999999754 5788999999864 3344677999999999999999999999994 5568999
Q ss_pred EEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccCC
Q 007668 382 YDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEE 461 (594)
Q Consensus 382 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~ 461 (594)
|||+++++|.+++......+++..+..++.|++.||.|||+ .+|+||||||+||+++.++.++|+|||++.......
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~ 164 (287)
T 1u59_A 88 MEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADD 164 (287)
T ss_dssp EECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCS
T ss_pred EEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHH---CCEeeCCCchheEEEcCCCCEEECcccceeeeccCc
Confidence 99999999999998766779999999999999999999995 499999999999999999999999999998775443
Q ss_pred ceee--eeeecccCccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHHHHhcccccccccCC
Q 007668 462 SHIT--TIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDP 538 (594)
Q Consensus 462 ~~~~--~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 538 (594)
.... ....||+.|+|||.+.+..++.++||||||+++|||++ |+.||......+ .. .......
T Consensus 165 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~---~~---~~i~~~~-------- 230 (287)
T 1u59_A 165 SYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE---VM---AFIEQGK-------- 230 (287)
T ss_dssp CEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHH---HH---HHHHTTC--------
T ss_pred ceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHH---HH---HHHhcCC--------
Confidence 3222 22346889999999998889999999999999999998 999987643211 11 1111111
Q ss_pred CCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccC
Q 007668 539 NCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVM 581 (594)
Q Consensus 539 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~~ 581 (594)
....+...+..+.+++.+||+.||++||++.++++.|++...
T Consensus 231 -~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 272 (287)
T 1u59_A 231 -RMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYY 272 (287)
T ss_dssp -CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -cCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 011223345779999999999999999999999999988643
No 96
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=3.7e-41 Score=347.97 Aligned_cols=268 Identities=17% Similarity=0.227 Sum_probs=205.5
Q ss_pred hcCCCccceeeeecceEEEEEEecC------CcEEEEEeecccchhh-----------HHHHHHHHHHHhhCCCCeeeee
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMDD------GNVFALKRIDKLNEGF-----------DRFFERELEILGSIKHRYLVNL 368 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~-----------~~~~~~E~~~l~~l~h~niv~l 368 (594)
.++|...+.||+|+||.||+|.+.. ++.||||++....... ...+..|+..+..++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 3478889999999999999998765 4789999987543211 1224456667778899999999
Q ss_pred eeEEeCC----CceEEEEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEec--C
Q 007668 369 RGYCNSP----TSKLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLD--G 442 (594)
Q Consensus 369 ~g~~~~~----~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~--~ 442 (594)
++++... ...++||||+ +++|.+++......+++..+..++.||+.||+|||+ .+|+||||||+|||++ .
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~---~~iiHrDlkp~Nill~~~~ 189 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHE---HEYVHGDIKASNLLLNYKN 189 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEESSC
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH---CCeEEecCCHHHEEEecCC
Confidence 9998664 4478999999 999999998876789999999999999999999995 4999999999999999 8
Q ss_pred CCcEEEeecccccccccCCcee------eeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhccc
Q 007668 443 NLEARVSDFGLAKLLEDEESHI------TTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKG 516 (594)
Q Consensus 443 ~~~~~l~Dfgl~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~ 516 (594)
++.+||+|||+++.+....... .....||+.|+|||++.+..++.++||||||+++|||++|+.||.......
T Consensus 190 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~- 268 (364)
T 3op5_A 190 PDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDP- 268 (364)
T ss_dssp TTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCH-
T ss_pred CCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCH-
Confidence 8999999999998765432211 133459999999999999999999999999999999999999997533221
Q ss_pred chHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccCC
Q 007668 517 LNIVGWLNFLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVMT 582 (594)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~~~ 582 (594)
........... .....++++.+. ....+..+.+++..||+.||++||+++++++.|++.+..
T Consensus 269 -~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~ 330 (364)
T 3op5_A 269 -KYVRDSKIRYR-ENIASLMDKCFP--AANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKA 330 (364)
T ss_dssp -HHHHHHHHHHH-HCHHHHHHHHSC--TTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHhh-hhHHHHHHHhcc--cccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Confidence 11111111111 111111111110 012236789999999999999999999999999987654
No 97
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=3.8e-41 Score=351.23 Aligned_cols=256 Identities=21% Similarity=0.324 Sum_probs=207.1
Q ss_pred HHHHhcCCCccceeeeecceEEEEEEec-CCcEEEEEeecccc---hhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCc
Q 007668 302 IIKKLETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLN---EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTS 377 (594)
Q Consensus 302 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~ 377 (594)
+....++|...+.||+|+||+||+|... +++.||+|++.+.. ....+.+.+|+.++..++||||+++++++.+...
T Consensus 64 ~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~ 143 (410)
T 3v8s_A 64 LRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRY 143 (410)
T ss_dssp HSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred cccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCE
Confidence 3344678999999999999999999876 58899999987522 1223458889999999999999999999999999
Q ss_pred eEEEEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeeccccccc
Q 007668 378 KLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLL 457 (594)
Q Consensus 378 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~ 457 (594)
.++||||+++|+|.++++. ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++++||+|||+++..
T Consensus 144 ~~lV~E~~~gg~L~~~l~~--~~~~e~~~~~~~~qi~~aL~~LH~---~givHrDLKp~NILl~~~g~ikL~DFG~a~~~ 218 (410)
T 3v8s_A 144 LYMVMEYMPGGDLVNLMSN--YDVPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKM 218 (410)
T ss_dssp EEEEECCCTTEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEEeCCCCCcHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeeECCCCCEEEeccceeEee
Confidence 9999999999999999975 358999999999999999999995 49999999999999999999999999999877
Q ss_pred ccCCceeeeeeecccCccCccccccCC----CCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccc
Q 007668 458 EDEESHITTIVAGTFGYLAPEYMQSGR----ATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQR 533 (594)
Q Consensus 458 ~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 (594)
...........+||+.|+|||++.+.. ++.++||||||+++|||++|+.||...... .............
T Consensus 219 ~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~------~~~~~i~~~~~~~ 292 (410)
T 3v8s_A 219 NKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV------GTYSKIMNHKNSL 292 (410)
T ss_dssp CTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHHHHHTHHHHC
T ss_pred ccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChh------hHHHHHHhccccc
Confidence 655444445678999999999998655 788999999999999999999999764322 1111111111000
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHcccCCCCC--CCCHHHHHH
Q 007668 534 EIIDPNCEGVQSESLDALLAVATQCVSSSPDD--RPTMHRVVQ 574 (594)
Q Consensus 534 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPs~~ev~~ 574 (594)
. -+.. ...+..+.+|+.+||+.+|++ ||+++||++
T Consensus 293 ~--~p~~----~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~ 329 (410)
T 3v8s_A 293 T--FPDD----NDISKEAKNLICAFLTDREVRLGRNGVEEIKR 329 (410)
T ss_dssp C--CCTT----CCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred c--CCCc----ccccHHHHHHHHHHccChhhhCCCCCHHHHhc
Confidence 0 0111 123467899999999999988 999999986
No 98
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=8.2e-41 Score=335.05 Aligned_cols=273 Identities=19% Similarity=0.237 Sum_probs=213.0
Q ss_pred hcCCCccceeeeecceEEEEEEe-cCCcEEEEEeecccchhhHHHHHHHHHHHhhCCCCeeeeeeeEE-eCCCceEEEEE
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAM-DDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYC-NSPTSKLLIYD 383 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~-~~~~~~~lv~e 383 (594)
.++|...+.||+|+||.||+|.. .+++.||||++..... .+.+.+|++++..++|+++++.++++ .+....++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence 35788899999999999999986 6789999998865433 24688999999999998877776665 56667799999
Q ss_pred ccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEe---cCCCcEEEeecccccccccC
Q 007668 384 FLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILL---DGNLEARVSDFGLAKLLEDE 460 (594)
Q Consensus 384 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll---~~~~~~~l~Dfgl~~~~~~~ 460 (594)
|+ +++|.+++......+++..+..++.||+.||+|||+. +|+||||||+||++ +.++.+||+|||++......
T Consensus 86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~ 161 (296)
T 3uzp_A 86 LL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA 161 (296)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred ec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccc
Confidence 99 9999999986667899999999999999999999954 99999999999999 48889999999999876554
Q ss_pred Cce------eeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhccccccc
Q 007668 461 ESH------ITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQRE 534 (594)
Q Consensus 461 ~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 (594)
... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||........................ .
T Consensus 162 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-~ 240 (296)
T 3uzp_A 162 RTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI-E 240 (296)
T ss_dssp TTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH-H
T ss_pred ccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCch-H
Confidence 321 123457999999999999999999999999999999999999999764332222111111110000000 0
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccCCCCC--ccccccC
Q 007668 535 IIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVMTPCP--SDFYDSN 592 (594)
Q Consensus 535 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~~~~~~--~~~~~~~ 592 (594)
.. ....+..+.+++.+||+.||++|||++++++.|++....... .+-|+|+
T Consensus 241 ~~-------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~~~~~~~dw~ 293 (296)
T 3uzp_A 241 VL-------CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWN 293 (296)
T ss_dssp HH-------TTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTCCSSCCCGGG
T ss_pred HH-------HhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCCccccccccc
Confidence 00 112236799999999999999999999999999987654332 3346664
No 99
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=8.3e-41 Score=331.94 Aligned_cols=249 Identities=25% Similarity=0.441 Sum_probs=185.8
Q ss_pred hcCCCccceeeeecceEEEEEEe-cCCcEEEEEeecccc---hhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEE
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAM-DDGNVFALKRIDKLN---EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLI 381 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv 381 (594)
.++|...+.||+|+||.||+|.. .+++.||+|.+.... ....+.+.+|++++++++||||+++++++.+....++|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 56788899999999999999976 578999999986532 22346789999999999999999999999999999999
Q ss_pred EEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccCC
Q 007668 382 YDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEE 461 (594)
Q Consensus 382 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~ 461 (594)
+||+++++|.+++......+++..+..++.|+++||+|||+. +++||||||+||+++.++.++|+|||++.......
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 166 (278)
T 3cok_A 90 LEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH 166 (278)
T ss_dssp EECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred EecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeeccCCC
Confidence 999999999999987767899999999999999999999954 99999999999999999999999999998765332
Q ss_pred ceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCCCCC
Q 007668 462 SHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCE 541 (594)
Q Consensus 462 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (594)
. ......||+.|+|||.+.+..++.++||||||+++|||++|+.||......... ..+.....
T Consensus 167 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~---------------~~~~~~~~- 229 (278)
T 3cok_A 167 E-KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTL---------------NKVVLADY- 229 (278)
T ss_dssp --------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC--------------------CCSSCC-
T ss_pred C-cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHH---------------HHHhhccc-
Confidence 2 123356899999999999888999999999999999999999999764322110 00000000
Q ss_pred CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 542 GVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 542 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
..+...+..+.+++.+||+.||++|||++++++
T Consensus 230 ~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 230 EMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred CCccccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 112234467899999999999999999999875
No 100
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=6.9e-41 Score=338.58 Aligned_cols=245 Identities=25% Similarity=0.383 Sum_probs=204.5
Q ss_pred hcCCCccceeeeecceEEEEEEec-CCcEEEEEeecccc---hhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEE
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLN---EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLI 381 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv 381 (594)
.++|+..+.||+|+||.||++... +|+.||+|++++.. ....+.+.+|+.+++.++||||+++++++.+....++|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 467888999999999999999775 68999999997532 23356788899999999999999999999999999999
Q ss_pred EEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccCC
Q 007668 382 YDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEE 461 (594)
Q Consensus 382 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~ 461 (594)
|||+++|+|.+++.. ...+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 85 ~e~~~gg~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~- 159 (318)
T 1fot_A 85 MDYIEGGELFSLLRK-SQRFPNPVAKFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV- 159 (318)
T ss_dssp ECCCCSCBHHHHHHH-TSSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC-
T ss_pred EeCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChheEEEcCCCCEEEeecCcceecCCc-
Confidence 999999999999976 356899999999999999999999 459999999999999999999999999999865432
Q ss_pred ceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCCCCC
Q 007668 462 SHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCE 541 (594)
Q Consensus 462 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (594)
.....||+.|+|||++.+..++.++||||+|+++|||++|+.||...... .......... . .
T Consensus 160 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~------~~~~~i~~~~-~------~-- 221 (318)
T 1fot_A 160 ---TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTM------KTYEKILNAE-L------R-- 221 (318)
T ss_dssp ---BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHHHHHHCC-C------C--
T ss_pred ---cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH------HHHHHHHhCC-C------C--
Confidence 23457999999999999999999999999999999999999999764221 1111111111 0 1
Q ss_pred CCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 007668 542 GVQSESLDALLAVATQCVSSSPDDRP-----TMHRVVQ 574 (594)
Q Consensus 542 ~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~ev~~ 574 (594)
.+...+..+.+++.+|++.||++|| +++|+++
T Consensus 222 -~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 222 -FPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp -CCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred -CCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 1123346789999999999999999 8888874
No 101
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=4.9e-41 Score=341.64 Aligned_cols=257 Identities=25% Similarity=0.406 Sum_probs=201.4
Q ss_pred cCCCccceeeeecceEEEEEEec-CCcE----EEEEeeccc-chhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEE
Q 007668 307 ETLDDDHIIGSGGFGTVYKLAMD-DGNV----FALKRIDKL-NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLL 380 (594)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~----vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l 380 (594)
++|...+.||+|+||.||+|... +++. ||+|.+... .....+.+.+|+.++++++||||+++++++.... .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~ 93 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEE
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceE
Confidence 56888899999999999999764 3443 577777542 3345678999999999999999999999998754 789
Q ss_pred EEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccC
Q 007668 381 IYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDE 460 (594)
Q Consensus 381 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~ 460 (594)
|+||+++|+|.+++......+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 94 v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~ 170 (327)
T 3lzb_A 94 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170 (327)
T ss_dssp EECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC-------
T ss_pred EEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcceeEccCc
Confidence 9999999999999988777899999999999999999999954 9999999999999999999999999999876543
Q ss_pred Cce-eeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHHHHhcccccccccCC
Q 007668 461 ESH-ITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDP 538 (594)
Q Consensus 461 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 538 (594)
... ......+|+.|+|||.+.+..++.++||||||+++|||++ |..||....... .. .. +....
T Consensus 171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~---~~---~~-~~~~~------- 236 (327)
T 3lzb_A 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---IS---SI-LEKGE------- 236 (327)
T ss_dssp ---------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---HH---HH-HHTTC-------
T ss_pred cccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH---HH---HH-HHcCC-------
Confidence 322 2233456889999999999999999999999999999999 999997643321 11 11 11110
Q ss_pred CCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccCC
Q 007668 539 NCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVMT 582 (594)
Q Consensus 539 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~~~ 582 (594)
....+...+..+.+++.+||+.||++|||++|+++.|+.....
T Consensus 237 -~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 237 -RLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp -CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred -CCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 0111223446789999999999999999999999999886543
No 102
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=1.2e-41 Score=345.87 Aligned_cols=256 Identities=26% Similarity=0.417 Sum_probs=202.4
Q ss_pred cCCCccceeeeecceEEEEEEec-CCcE----EEEEeecccc-hhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEE
Q 007668 307 ETLDDDHIIGSGGFGTVYKLAMD-DGNV----FALKRIDKLN-EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLL 380 (594)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~----vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l 380 (594)
++|...+.||+|+||.||+|... +++. ||+|.+.... ......+.+|+.++++++||||+++++++. ....++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~ 91 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL 91 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence 46778899999999999999764 3443 7888775432 223356778999999999999999999986 456889
Q ss_pred EEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccC
Q 007668 381 IYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDE 460 (594)
Q Consensus 381 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~ 460 (594)
|+||+++|+|.+++......+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 92 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 168 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPD 168 (325)
T ss_dssp EEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCC
T ss_pred EEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCcccccCcc
Confidence 9999999999999987666799999999999999999999954 9999999999999999999999999999877544
Q ss_pred Cce-eeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHHHHhcccccccccCC
Q 007668 461 ESH-ITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDP 538 (594)
Q Consensus 461 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 538 (594)
... ......|+..|+|||.+.+..++.++||||||+++|||++ |+.||....... ... ....... .
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---~~~---~~~~~~~---~--- 236 (325)
T 3kex_A 169 DKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE---VPD---LLEKGER---L--- 236 (325)
T ss_dssp TTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTH---HHH---HHHTTCB---C---
T ss_pred cccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHH---HHH---HHHcCCC---C---
Confidence 332 2344567889999999999999999999999999999999 999997643221 111 1111110 0
Q ss_pred CCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccC
Q 007668 539 NCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVM 581 (594)
Q Consensus 539 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~~ 581 (594)
..+...+..+.+++.+||+.||++|||++|+++.|++...
T Consensus 237 ---~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~ 276 (325)
T 3kex_A 237 ---AQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMAR 276 (325)
T ss_dssp ---CCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred ---CCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 0111223457899999999999999999999999987643
No 103
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.6e-40 Score=333.72 Aligned_cols=263 Identities=23% Similarity=0.322 Sum_probs=201.5
Q ss_pred HhcCCCccceeeeecceEEEEEEec-CCcEEEEEeecccc---hhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEE
Q 007668 305 KLETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLN---EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLL 380 (594)
Q Consensus 305 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l 380 (594)
..++|...+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++.+++||||+++++++......++
T Consensus 32 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l 111 (309)
T 2h34_A 32 QFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYV 111 (309)
T ss_dssp --CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred EeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEE
Confidence 3578999999999999999999865 68899999987532 2334678999999999999999999999999999999
Q ss_pred EEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccC
Q 007668 381 IYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDE 460 (594)
Q Consensus 381 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~ 460 (594)
|+||+++++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 112 v~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 187 (309)
T 2h34_A 112 DMRLINGVDLAAMLRRQ-GPLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASATTDE 187 (309)
T ss_dssp EEECCCCEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC-------
T ss_pred EEEecCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCcccccc
Confidence 99999999999999764 5689999999999999999999954 9999999999999999999999999999876554
Q ss_pred CceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCCCC
Q 007668 461 ESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNC 540 (594)
Q Consensus 461 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 540 (594)
.........|++.|+|||.+.+..++.++||||||+++|||++|+.||...... ............ .
T Consensus 188 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-------~~~~~~~~~~~~------~ 254 (309)
T 2h34_A 188 KLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS-------VMGAHINQAIPR------P 254 (309)
T ss_dssp ---------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH-------HHHHHHHSCCCC------G
T ss_pred ccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH-------HHHHHhccCCCC------c
Confidence 433334557899999999999999999999999999999999999999764322 111111111000 0
Q ss_pred CCCCHHHHHHHHHHHHHcccCCCCCCC-CHHHHHHHHhcccCCCC
Q 007668 541 EGVQSESLDALLAVATQCVSSSPDDRP-TMHRVVQILESEVMTPC 584 (594)
Q Consensus 541 ~~~~~~~~~~l~~l~~~cl~~dP~~RP-s~~ev~~~L~~~~~~~~ 584 (594)
.......+..+.+++.+||+.||++|| +++++++.|++.+....
T Consensus 255 ~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~ 299 (309)
T 2h34_A 255 STVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATAD 299 (309)
T ss_dssp GGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC---
T ss_pred cccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhhc
Confidence 011223345789999999999999999 99999999998766543
No 104
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=2.1e-40 Score=338.93 Aligned_cols=250 Identities=22% Similarity=0.370 Sum_probs=200.4
Q ss_pred hcCCCccceeeeecceEEEEEEec-CCcEEEEEeeccc---chhhHHHHHHHHHHHhhC-CCCeeeeeeeEEeCCCceEE
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKL---NEGFDRFFERELEILGSI-KHRYLVNLRGYCNSPTSKLL 380 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~l 380 (594)
.++|...+.||+|+||.||+|... +++.||+|++.+. .....+.+.+|..++.++ +||||+++++++.+....++
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 87 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 87 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence 467888999999999999999876 5889999999753 233355688899999988 89999999999999999999
Q ss_pred EEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccC
Q 007668 381 IYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDE 460 (594)
Q Consensus 381 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~ 460 (594)
||||+++|+|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++++||+|||+++.....
T Consensus 88 v~e~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~ 163 (345)
T 3a8x_A 88 VIEYVNGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 163 (345)
T ss_dssp EECCCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCT
T ss_pred EEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEECCCCCEEEEeccccccccCC
Confidence 99999999999999764 569999999999999999999995 49999999999999999999999999999864332
Q ss_pred CceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccc--hHHHHHHHHhcccccccccCC
Q 007668 461 ESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGL--NIVGWLNFLISEDRQREIIDP 538 (594)
Q Consensus 461 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 538 (594)
. .......||+.|+|||++.+..++.++||||+||++|||++|+.||......... .........+.....
T Consensus 164 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~------ 236 (345)
T 3a8x_A 164 G-DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI------ 236 (345)
T ss_dssp T-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCC------
T ss_pred C-CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCC------
Confidence 2 2234467999999999999999999999999999999999999999653211110 001111111111110
Q ss_pred CCCCCCHHHHHHHHHHHHHcccCCCCCCCCH
Q 007668 539 NCEGVQSESLDALLAVATQCVSSSPDDRPTM 569 (594)
Q Consensus 539 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~ 569 (594)
..+...+..+.+++.+||+.||++||++
T Consensus 237 ---~~p~~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 237 ---RIPRSLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp ---CCCTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred ---CCCCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence 1122344678999999999999999996
No 105
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.3e-40 Score=332.29 Aligned_cols=249 Identities=23% Similarity=0.370 Sum_probs=196.2
Q ss_pred hcCCCccceeeeecceEEEEEEec-CCcEEEEEeecccch--------------------------hhHHHHHHHHHHHh
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNE--------------------------GFDRFFERELEILG 358 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------------------------~~~~~~~~E~~~l~ 358 (594)
.++|...+.||+|+||.||+|... +++.||||++..... ...+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 467888999999999999999764 688999999865321 11246889999999
Q ss_pred hCCCCeeeeeeeEEeC--CCceEEEEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCC
Q 007668 359 SIKHRYLVNLRGYCNS--PTSKLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSS 436 (594)
Q Consensus 359 ~l~h~niv~l~g~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~ 436 (594)
+++||||+++++++.+ ....++||||+++++|.+++.. ..+++..+..++.||+.||+|||+. +|+||||||+
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~ 166 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL--KPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPS 166 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGG
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHH
Confidence 9999999999999976 5678999999999999987643 5699999999999999999999964 9999999999
Q ss_pred CeEecCCCcEEEeecccccccccCCceeeeeeecccCccCccccccCC---CCccchhhhHHHHHHHHHhCCCCCCcchh
Q 007668 437 NILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGR---ATEKTDVYSFGVLVLEVLSGKRPTDASFI 513 (594)
Q Consensus 437 NIll~~~~~~~l~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~Dv~s~G~vl~elltg~~p~~~~~~ 513 (594)
||+++.++.+||+|||++........ ......||+.|+|||.+.+.. .+.++||||||+++|||++|+.||.....
T Consensus 167 Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~ 245 (298)
T 2zv2_A 167 NLLVGEDGHIKIADFGVSNEFKGSDA-LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERI 245 (298)
T ss_dssp GEEECTTSCEEECCCTTCEECSSSSC-EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred HEEECCCCCEEEecCCCccccccccc-cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccH
Confidence 99999999999999999987654432 233457999999999998665 37889999999999999999999975322
Q ss_pred cccchHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 514 EKGLNIVGWLNFLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
. ....... ...... +. ....+..+.+++.+||+.||++|||++|+++
T Consensus 246 ~------~~~~~~~-~~~~~~---~~----~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 246 M------CLHSKIK-SQALEF---PD----QPDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp H------HHHHHHH-HCCCCC---CS----SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred H------HHHHHHh-cccCCC---CC----ccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 1 1111111 111100 11 1123467899999999999999999999864
No 106
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=6.9e-41 Score=338.15 Aligned_cols=244 Identities=22% Similarity=0.290 Sum_probs=193.6
Q ss_pred cCCCccceeeeecceEEEEEEec-CCcEEEEEeecccc--hhhHHHHHHHHHHHhhC-CCCeeeeeeeEEeCCCceEEEE
Q 007668 307 ETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLN--EGFDRFFERELEILGSI-KHRYLVNLRGYCNSPTSKLLIY 382 (594)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lv~ 382 (594)
++|+..+.||+|+||+||+|... +++.||||++.... ......+..|+..+.++ +||||+++++++.+....++||
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~ 136 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT 136 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence 57888999999999999999876 78999999986532 22333455566555554 8999999999999999999999
Q ss_pred EccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccCCc
Q 007668 383 DFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEES 462 (594)
Q Consensus 383 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~~ 462 (594)
||+ +++|.+++......+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||++.......
T Consensus 137 e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~- 211 (311)
T 3p1a_A 137 ELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG- 211 (311)
T ss_dssp ECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEECC----
T ss_pred ecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeecccCC-
Confidence 999 7799999987777899999999999999999999964 99999999999999999999999999998765432
Q ss_pred eeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCCCCCC
Q 007668 463 HITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEG 542 (594)
Q Consensus 463 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 542 (594)
......||+.|+|||++.+ .++.++||||||+++|||++|..|+..... +.. . ........
T Consensus 212 -~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~--------~~~-~-~~~~~~~~------- 272 (311)
T 3p1a_A 212 -AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEG--------WQQ-L-RQGYLPPE------- 272 (311)
T ss_dssp ----CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHH--------HHH-H-TTTCCCHH-------
T ss_pred -CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccH--------HHH-H-hccCCCcc-------
Confidence 2334568999999999875 799999999999999999999776544211 000 0 00100000
Q ss_pred CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 543 VQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 543 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
.....+..+.+++.+||+.||++|||++|+++
T Consensus 273 ~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 273 FTAGLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 11123467999999999999999999999985
No 107
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=1.2e-40 Score=342.15 Aligned_cols=251 Identities=22% Similarity=0.318 Sum_probs=202.2
Q ss_pred cCCCccceeeeecceEEEEEEec-CCcEEEEEeecccc-----hhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEE
Q 007668 307 ETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLN-----EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLL 380 (594)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l 380 (594)
+.|+..+.||+|+||.||++... +++.||||++.... ....+.+.+|+++++.++||||+++++++.+....++
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 103 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM 103 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 46888999999999999999765 68999999986421 1235679999999999999999999999999999999
Q ss_pred EEEccCCCchhhhhhhc---CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCc---EEEeecccc
Q 007668 381 IYDFLPGGSLDEALHER---SEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLE---ARVSDFGLA 454 (594)
Q Consensus 381 v~e~~~~gsL~~~l~~~---~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~---~~l~Dfgl~ 454 (594)
||||+++|+|.+.+... ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++. +||+|||++
T Consensus 104 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a 180 (351)
T 3c0i_A 104 VFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD---NNIIHRDVKPHCVLLASKENSAPVKLGGFGVA 180 (351)
T ss_dssp EEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECSSSTTCCEEECCCTTC
T ss_pred EEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCChHHeEEecCCCCCcEEEecCcce
Confidence 99999999999888643 3458999999999999999999995 49999999999999986554 999999999
Q ss_pred cccccCCceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhccccccc
Q 007668 455 KLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQRE 534 (594)
Q Consensus 455 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 (594)
........ ......||+.|+|||++.+..++.++||||+|+++|||++|+.||...... ...........
T Consensus 181 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-------~~~~i~~~~~~-- 250 (351)
T 3c0i_A 181 IQLGESGL-VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKER-------LFEGIIKGKYK-- 250 (351)
T ss_dssp EECCTTSC-BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHH-------HHHHHHHTCCC--
T ss_pred eEecCCCe-eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHH-------HHHHHHcCCCC--
Confidence 87654332 233457999999999999999999999999999999999999999764221 11111111000
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 535 IIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 535 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
..+. .....+..+.+++.+||+.||++|||+.|+++
T Consensus 251 -~~~~---~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 251 -MNPR---QWSHISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp -CCHH---HHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred -CCcc---ccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0000 00123467899999999999999999999985
No 108
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=2.1e-41 Score=342.62 Aligned_cols=270 Identities=26% Similarity=0.410 Sum_probs=216.1
Q ss_pred CCCCHHHHHHHhcCCCccceeeeecceEEEEEEe------cCCcEEEEEeecccc-hhhHHHHHHHHHHHhhC-CCCeee
Q 007668 295 LPYSSKDIIKKLETLDDDHIIGSGGFGTVYKLAM------DDGNVFALKRIDKLN-EGFDRFFERELEILGSI-KHRYLV 366 (594)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv 366 (594)
.++...+.....++|...+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|++++.++ +||||+
T Consensus 15 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv 94 (316)
T 2xir_A 15 LPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94 (316)
T ss_dssp SCCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred ccccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCee
Confidence 3555666666678899999999999999999974 356889999997643 33456789999999999 799999
Q ss_pred eeeeEEeCCCc-eEEEEEccCCCchhhhhhhcCCC---------------CCHHHHHHHHHHHHHHHHHhhhcCCCCeee
Q 007668 367 NLRGYCNSPTS-KLLIYDFLPGGSLDEALHERSEQ---------------LDWDARLNIIMGAAKGLAYLHHDCSPRIIH 430 (594)
Q Consensus 367 ~l~g~~~~~~~-~~lv~e~~~~gsL~~~l~~~~~~---------------l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH 430 (594)
++++++..... .++|+||+++|+|.+++...... +++..+..++.||+.||+|||+ .+|+|
T Consensus 95 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H 171 (316)
T 2xir_A 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIH 171 (316)
T ss_dssp CEEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHH---TTCCC
T ss_pred eEEEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHh---CCccc
Confidence 99999876554 89999999999999999864332 8899999999999999999995 49999
Q ss_pred CCCCCCCeEecCCCcEEEeecccccccccCCc-eeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHh-CCCCC
Q 007668 431 RDIKSSNILLDGNLEARVSDFGLAKLLEDEES-HITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPT 508 (594)
Q Consensus 431 ~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~ 508 (594)
|||||+||+++.++.+||+|||+++....... .......||+.|+|||++.+..++.++||||||+++|||++ |..||
T Consensus 172 ~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~ 251 (316)
T 2xir_A 172 RDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 251 (316)
T ss_dssp SCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSS
T ss_pred ccCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999999987654433 22334568899999999999999999999999999999998 99998
Q ss_pred CcchhcccchHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccC
Q 007668 509 DASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVM 581 (594)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~~ 581 (594)
....... . .... ...... . ..+...+..+.+++.+||+.||++|||+.|+++.|++.+.
T Consensus 252 ~~~~~~~--~---~~~~-~~~~~~-----~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 310 (316)
T 2xir_A 252 PGVKIDE--E---FCRR-LKEGTR-----M---RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 310 (316)
T ss_dssp TTCCCSH--H---HHHH-HHHTCC-----C---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cccchhH--H---HHHH-hccCcc-----C---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 6543211 0 1111 111100 0 1112234678999999999999999999999999988654
No 109
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=4.3e-41 Score=340.83 Aligned_cols=259 Identities=24% Similarity=0.391 Sum_probs=205.7
Q ss_pred CCccceeeeecceEEEEEEec-----CCcEEEEEeecccc-hhhHHHHHHHHHHHhhCCCCeeeeeeeEEeC--CCceEE
Q 007668 309 LDDDHIIGSGGFGTVYKLAMD-----DGNVFALKRIDKLN-EGFDRFFERELEILGSIKHRYLVNLRGYCNS--PTSKLL 380 (594)
Q Consensus 309 ~~~~~~lG~G~~g~Vy~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~--~~~~~l 380 (594)
|+..+.||+|+||.||++.+. +++.||||++.... ....+.+.+|++++++++||||+++++++.+ ....++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 478899999999999988643 68899999998643 3445679999999999999999999999976 456789
Q ss_pred EEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccC
Q 007668 381 IYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDE 460 (594)
Q Consensus 381 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~ 460 (594)
||||+++|+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||++......
T Consensus 113 v~e~~~~~~L~~~l~~~--~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 187 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRH--SIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG 187 (318)
T ss_dssp EECCCTTCBHHHHGGGS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECCTT
T ss_pred EEecccCCcHHHHHhhC--CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCcccccccccc
Confidence 99999999999999763 489999999999999999999964 9999999999999999999999999999877654
Q ss_pred Cce--eeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhccc------chHH--HHHHHHhccc
Q 007668 461 ESH--ITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKG------LNIV--GWLNFLISED 530 (594)
Q Consensus 461 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~------~~~~--~~~~~~~~~~ 530 (594)
... ......||..|+|||.+.+..++.++||||||+++|||++|+.||........ .... ..........
T Consensus 188 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (318)
T 3lxp_A 188 HEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERG 267 (318)
T ss_dssp CSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTT
T ss_pred ccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcc
Confidence 332 22345678899999999998999999999999999999999999865432100 0000 0000111110
Q ss_pred ccccccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccc
Q 007668 531 RQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEV 580 (594)
Q Consensus 531 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~ 580 (594)
.....+...+..+.+++.+||+.||++|||++|+++.|++..
T Consensus 268 --------~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~ 309 (318)
T 3lxp_A 268 --------ERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVH 309 (318)
T ss_dssp --------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --------cCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence 011122334577999999999999999999999999998754
No 110
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=1.1e-40 Score=334.18 Aligned_cols=273 Identities=19% Similarity=0.240 Sum_probs=209.6
Q ss_pred hcCCCccceeeeecceEEEEEEe-cCCcEEEEEeecccchhhHHHHHHHHHHHhhCCCCeeeeeeeEE-eCCCceEEEEE
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAM-DDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYC-NSPTSKLLIYD 383 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~-~~~~~~~lv~e 383 (594)
.++|...+.||+|+||.||+|.. .+++.||||++..... ...+.+|++++..++|++++..++++ .+....++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 4hgt_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp ---CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEE
Confidence 46789999999999999999976 5788999998654322 23578899999999988877777666 66677799999
Q ss_pred ccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEe---cCCCcEEEeecccccccccC
Q 007668 384 FLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILL---DGNLEARVSDFGLAKLLEDE 460 (594)
Q Consensus 384 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll---~~~~~~~l~Dfgl~~~~~~~ 460 (594)
|+ +++|.+++......+++..+..++.||+.||+|||+. +|+||||||+||++ +.++.+||+|||++......
T Consensus 86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~ 161 (296)
T 4hgt_A 86 LL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA 161 (296)
T ss_dssp CC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred cc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCccceeccCc
Confidence 99 9999999987667899999999999999999999954 99999999999999 78899999999999876544
Q ss_pred Cce------eeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhccccccc
Q 007668 461 ESH------ITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQRE 534 (594)
Q Consensus 461 ~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 (594)
... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||........................ .
T Consensus 162 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-~ 240 (296)
T 4hgt_A 162 RTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI-E 240 (296)
T ss_dssp TTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH-H
T ss_pred ccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchh-h
Confidence 321 123457899999999999999999999999999999999999999764332222111111110000000 0
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccCCC--CCccccccC
Q 007668 535 IIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVMTP--CPSDFYDSN 592 (594)
Q Consensus 535 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~~~~--~~~~~~~~~ 592 (594)
.. ....+..+.+++.+||+.||++|||++++++.|++..... ...+.++|+
T Consensus 241 ~~-------~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~~~~~~~~dw~ 293 (296)
T 4hgt_A 241 VL-------CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWN 293 (296)
T ss_dssp HH-------TTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHTCCTTCCCGGG
T ss_pred hh-------hccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhCCCccCccchh
Confidence 00 0112367999999999999999999999999999876632 223345554
No 111
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=2.9e-40 Score=348.46 Aligned_cols=252 Identities=23% Similarity=0.318 Sum_probs=203.9
Q ss_pred hcCCCccceeeeecceEEEEEEe-cCCcEEEEEeecccc--hhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEEE
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAM-DDGNVFALKRIDKLN--EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIY 382 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ 382 (594)
.++|...+.||+|+||.||++.. .+|+.+|+|++.... ....+.+.+|++++++++||||+++++++.+....++||
T Consensus 10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~ 89 (444)
T 3soa_A 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIF 89 (444)
T ss_dssp HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEE
T ss_pred cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEE
Confidence 46788899999999999999965 468999999987533 334567899999999999999999999999999999999
Q ss_pred EccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEec---CCCcEEEeeccccccccc
Q 007668 383 DFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLD---GNLEARVSDFGLAKLLED 459 (594)
Q Consensus 383 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~---~~~~~~l~Dfgl~~~~~~ 459 (594)
||+++|+|.+.+..+ ..+++..+..++.||+.||+|||+ .+|+||||||+|||++ .++.+||+|||++.....
T Consensus 90 E~~~gg~L~~~i~~~-~~~~e~~~~~i~~qil~aL~~lH~---~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~ 165 (444)
T 3soa_A 90 DLVTGGELFEDIVAR-EYYSEADASHCIQQILEAVLHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEG 165 (444)
T ss_dssp CCCBCCBHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCT
T ss_pred EeCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEeccCCCCcEEEccCceeEEecC
Confidence 999999999999764 569999999999999999999995 4999999999999998 567899999999987654
Q ss_pred CCceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCCC
Q 007668 460 EESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPN 539 (594)
Q Consensus 460 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (594)
... ......||+.|+|||++.+..++.++||||+|+++|+|++|..||....... ......... .....+.
T Consensus 166 ~~~-~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~------~~~~i~~~~--~~~~~~~ 236 (444)
T 3soa_A 166 EQQ-AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHR------LYQQIKAGA--YDFPSPE 236 (444)
T ss_dssp TCC-BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH------HHHHHHHTC--CCCCTTT
T ss_pred CCc-eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHH------HHHHHHhCC--CCCCccc
Confidence 332 2334679999999999999899999999999999999999999996542211 111111111 0111111
Q ss_pred CCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 540 CEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 540 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
+ ...+..+.+++.+||+.||++|||+.|+++
T Consensus 237 ~----~~~s~~~~~li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 237 W----DTVTPEAKDLINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp T----TTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred c----ccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 1 233467899999999999999999999986
No 112
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=6.5e-41 Score=346.45 Aligned_cols=250 Identities=28% Similarity=0.431 Sum_probs=203.5
Q ss_pred hcCCCccceeeeecceEEEEEEec-CCcEEEEEeeccc---chhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEE
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKL---NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLI 381 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv 381 (594)
.++|...+.||+|+||.||++... +++.||+|++... .....+.+.+|++++..++||||+++++++.+....++|
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv 93 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV 93 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 467889999999999999999765 5789999998653 223356788999999999999999999999999999999
Q ss_pred EEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccCC
Q 007668 382 YDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEE 461 (594)
Q Consensus 382 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~ 461 (594)
|||+++|+|.+++.. ...+++..+..++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||++.......
T Consensus 94 ~e~~~gg~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 169 (384)
T 4fr4_A 94 VDLLLGGDLRYHLQQ-NVHFKEETVKLFICELVMALDYLQN---QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET 169 (384)
T ss_dssp ECCCTTEEHHHHHHT-TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred EecCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCcHHHeEECCCCCEEEeccceeeeccCCC
Confidence 999999999999976 4569999999999999999999995 499999999999999999999999999998765432
Q ss_pred ceeeeeeecccCccCcccccc---CCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCC
Q 007668 462 SHITTIVAGTFGYLAPEYMQS---GRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDP 538 (594)
Q Consensus 462 ~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 538 (594)
......||+.|+|||++.+ ..++.++|||||||++|||++|+.||............ ..... .
T Consensus 170 --~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~---~~~~~-~-------- 235 (384)
T 4fr4_A 170 --QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIV---HTFET-T-------- 235 (384)
T ss_dssp --CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHH---HHHHH-C--------
T ss_pred --ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHH---HHHhh-c--------
Confidence 2344679999999999864 45899999999999999999999999754322111111 11110 0
Q ss_pred CCCCCCHHHHHHHHHHHHHcccCCCCCCCC-HHHHHH
Q 007668 539 NCEGVQSESLDALLAVATQCVSSSPDDRPT-MHRVVQ 574 (594)
Q Consensus 539 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-~~ev~~ 574 (594)
....+...+..+.+++.+||+.||++||+ ++++.+
T Consensus 236 -~~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 236 -VVTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp -CCCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred -ccCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 01122234467999999999999999998 677654
No 113
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=7.9e-41 Score=342.66 Aligned_cols=245 Identities=24% Similarity=0.314 Sum_probs=204.8
Q ss_pred hcCCCccceeeeecceEEEEEEec-CCcEEEEEeecccc---hhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEE
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLN---EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLI 381 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv 381 (594)
.++|+..+.||+|+||.||++... +|+.||+|++.... ....+.+.+|++++..++||||+++++++.+....++|
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 119 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 467888999999999999999875 68999999997532 23356788999999999999999999999999999999
Q ss_pred EEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccCC
Q 007668 382 YDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEE 461 (594)
Q Consensus 382 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~ 461 (594)
|||+++|+|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++.....
T Consensus 120 ~e~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~- 194 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR- 194 (350)
T ss_dssp EECCTTCBHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC-
T ss_pred EcCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCccceEEECCCCCEEEcccccceeccCC-
Confidence 9999999999999764 469999999999999999999995 49999999999999999999999999999876543
Q ss_pred ceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCCCCC
Q 007668 462 SHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCE 541 (594)
Q Consensus 462 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (594)
.....||+.|+|||++.+..++.++||||||+++|||++|+.||...... .......... .
T Consensus 195 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~------~~~~~i~~~~-~--------- 255 (350)
T 1rdq_E 195 ---TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI------QIYEKIVSGK-V--------- 255 (350)
T ss_dssp ---BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHCC-C---------
T ss_pred ---cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHH------HHHHHHHcCC-C---------
Confidence 23457899999999999999999999999999999999999999764221 1111111111 0
Q ss_pred CCCHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 007668 542 GVQSESLDALLAVATQCVSSSPDDRPT-----MHRVVQ 574 (594)
Q Consensus 542 ~~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~ev~~ 574 (594)
..+...+..+.+++.+||+.||++||+ ++|+++
T Consensus 256 ~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 256 RFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp CCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred CCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 112234467899999999999999998 888874
No 114
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=2.1e-41 Score=345.85 Aligned_cols=249 Identities=23% Similarity=0.359 Sum_probs=203.5
Q ss_pred HHhcCCCccceeeeecceEEEEEEec-CCcEEEEEeecccc---hhhHHHHHHHHHHHhhC-CCCeeeeeeeEEeCCCce
Q 007668 304 KKLETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLN---EGFDRFFERELEILGSI-KHRYLVNLRGYCNSPTSK 378 (594)
Q Consensus 304 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~ 378 (594)
...++|...+.||+|+||.||+|... +++.||+|++++.. ....+.+..|.+++..+ +||||+++++++.+....
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~ 93 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL 93 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence 45678999999999999999999875 58899999997532 23345678899998876 999999999999999999
Q ss_pred EEEEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccc
Q 007668 379 LLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLE 458 (594)
Q Consensus 379 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~ 458 (594)
++||||+++|+|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++++||+|||+++...
T Consensus 94 ~lv~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 169 (345)
T 1xjd_A 94 FFVMEYLNGGDLMYHIQSC-HKFDLSRATFYAAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENM 169 (345)
T ss_dssp EEEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCChhhEEECCCCCEEEeEChhhhhcc
Confidence 9999999999999999763 569999999999999999999995 499999999999999999999999999998643
Q ss_pred cCCceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCC
Q 007668 459 DEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDP 538 (594)
Q Consensus 459 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 538 (594)
.... ......||+.|+|||++.+..++.++||||+|+++|||++|+.||....... ......... +
T Consensus 170 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~------~~~~i~~~~-------~ 235 (345)
T 1xjd_A 170 LGDA-KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEE------LFHSIRMDN-------P 235 (345)
T ss_dssp CTTC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHCC-------C
T ss_pred cCCC-cccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHH------HHHHHHhCC-------C
Confidence 3222 2345679999999999999999999999999999999999999997643221 111111111 1
Q ss_pred CCCCCCHHHHHHHHHHHHHcccCCCCCCCCHH-HHH
Q 007668 539 NCEGVQSESLDALLAVATQCVSSSPDDRPTMH-RVV 573 (594)
Q Consensus 539 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~-ev~ 573 (594)
. .+...+..+.+++.+||+.||++||++. +++
T Consensus 236 ~---~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 236 F---YPRWLEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp C---CCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred C---CCcccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 1 1122346789999999999999999997 554
No 115
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=2.7e-40 Score=340.66 Aligned_cols=251 Identities=24% Similarity=0.360 Sum_probs=204.0
Q ss_pred hcCCCccceeeeecceEEEEEEec-CCcEEEEEeeccc--chhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEEE
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKL--NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIY 382 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ 382 (594)
.++|...+.||+|+||.||++... +++.||+|++... .....+.+.+|++++++++||||+++++++.+....++||
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~ 107 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 107 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 457888999999999999999765 5899999999753 3334567889999999999999999999999999999999
Q ss_pred EccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCC---CcEEEeeccccccccc
Q 007668 383 DFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGN---LEARVSDFGLAKLLED 459 (594)
Q Consensus 383 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~---~~~~l~Dfgl~~~~~~ 459 (594)
||+++|+|.+.+..+ ..+++..+..++.||+.||+|||+. +|+||||||+|||++.+ +.+||+|||++.....
T Consensus 108 e~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~ 183 (362)
T 2bdw_A 108 DLVTGGELFEDIVAR-EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 183 (362)
T ss_dssp CCCCSCBHHHHHTTC-SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTT
T ss_pred ecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcceEecC
Confidence 999999999998753 5689999999999999999999954 99999999999999865 4599999999987654
Q ss_pred CCceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCCC
Q 007668 460 EESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPN 539 (594)
Q Consensus 460 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (594)
... .....||+.|+|||++.+..++.++||||||+++|+|++|..||...... .......... . ....+
T Consensus 184 ~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~------~~~~~i~~~~-~-~~~~~- 252 (362)
T 2bdw_A 184 SEA--WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH------RLYAQIKAGA-Y-DYPSP- 252 (362)
T ss_dssp CCS--CCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHTC-C-CCCTT-
T ss_pred Ccc--cccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH------HHHHHHHhCC-C-CCCcc-
Confidence 322 23457999999999999989999999999999999999999999753221 1111111110 0 00000
Q ss_pred CCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 540 CEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 540 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
.....+..+.+++.+||+.||++|||+.|+++
T Consensus 253 ---~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 284 (362)
T 2bdw_A 253 ---EWDTVTPEAKSLIDSMLTVNPKKRITADQALK 284 (362)
T ss_dssp ---GGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ---cccCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 11233467899999999999999999999875
No 116
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=8.3e-41 Score=339.92 Aligned_cols=248 Identities=24% Similarity=0.373 Sum_probs=194.4
Q ss_pred hcCCCccceeeeecceEEEEEEe----cCCcEEEEEeecccc----hhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCc
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAM----DDGNVFALKRIDKLN----EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTS 377 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~ 377 (594)
.++|+..+.||+|+||.||++.. .+++.||+|++++.. ......+.+|++++++++||||+++++++.....
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 46788999999999999999987 478999999997532 2234567889999999999999999999999999
Q ss_pred eEEEEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeeccccccc
Q 007668 378 KLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLL 457 (594)
Q Consensus 378 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~ 457 (594)
.++||||+++|+|.+++... ..+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~ 171 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLERE-GIFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKES 171 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC---
T ss_pred EEEEEeCCCCCcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCccccc
Confidence 99999999999999999764 5689999999999999999999954 9999999999999999999999999999754
Q ss_pred ccCCceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccC
Q 007668 458 EDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIID 537 (594)
Q Consensus 458 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 537 (594)
..... ......||+.|+|||++.+..++.++||||||+++|||++|+.||....... ......... .
T Consensus 172 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~------~~~~i~~~~---~--- 238 (327)
T 3a62_A 172 IHDGT-VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKK------TIDKILKCK---L--- 238 (327)
T ss_dssp --------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH------HHHHHHHTC---C---
T ss_pred ccCCc-cccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHH------HHHHHHhCC---C---
Confidence 43221 2334568999999999999899999999999999999999999997643221 111111110 0
Q ss_pred CCCCCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 007668 538 PNCEGVQSESLDALLAVATQCVSSSPDDRP-----TMHRVVQ 574 (594)
Q Consensus 538 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~ev~~ 574 (594)
..+...+..+.+++.+||+.||++|| ++.|+++
T Consensus 239 ----~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 239 ----NLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp ----CCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred ----CCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 11122346789999999999999999 6777764
No 117
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=8.6e-41 Score=366.98 Aligned_cols=249 Identities=25% Similarity=0.424 Sum_probs=200.8
Q ss_pred eeeeecceEEEEEEec---CCcEEEEEeecccc-hhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEEEEccCCCc
Q 007668 314 IIGSGGFGTVYKLAMD---DGNVFALKRIDKLN-EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDFLPGGS 389 (594)
Q Consensus 314 ~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~gs 389 (594)
.||+|+||.||+|.+. ++..||||+++... ....+.+.+|++++++++||||+++++++.. +..++||||+++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 7999999999999764 46679999998643 3356789999999999999999999999976 56899999999999
Q ss_pred hhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccCCceee--ee
Q 007668 390 LDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHIT--TI 467 (594)
Q Consensus 390 L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~~~~~--~~ 467 (594)
|.+++......+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++.......... ..
T Consensus 422 L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~---~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~ 498 (613)
T 2ozo_A 422 LHKFLVGKREEIPVSNVAELLHQVSMGMKYLEE---KNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSA 498 (613)
T ss_dssp HHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-----------
T ss_pred HHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH---CCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccC
Confidence 999998777779999999999999999999995 4999999999999999999999999999987654332222 22
Q ss_pred eecccCccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHHHHhcccccccccCCCCCCCCHH
Q 007668 468 VAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQSE 546 (594)
Q Consensus 468 ~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (594)
..+++.|+|||++.+..++.++||||||+++|||++ |+.||......+ .. ........ ...+..
T Consensus 499 ~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~---~~---~~i~~~~~---------~~~p~~ 563 (613)
T 2ozo_A 499 GKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE---VM---AFIEQGKR---------MECPPE 563 (613)
T ss_dssp ---CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHH---HH---HHHHTTCC---------CCCCTT
T ss_pred CCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHH---HH---HHHHcCCC---------CCCCCc
Confidence 345689999999999999999999999999999998 999997643221 11 11111111 111223
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccC
Q 007668 547 SLDALLAVATQCVSSSPDDRPTMHRVVQILESEVM 581 (594)
Q Consensus 547 ~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~~ 581 (594)
.+..+.+++.+||+.||++||++.+|++.|+....
T Consensus 564 ~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~ 598 (613)
T 2ozo_A 564 CPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYY 598 (613)
T ss_dssp CCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 45779999999999999999999999999988643
No 118
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=7.8e-41 Score=341.63 Aligned_cols=274 Identities=24% Similarity=0.375 Sum_probs=201.0
Q ss_pred hcCCCccceeeeecceEEEEEEecCCcEEEEEeecccchhhHHHHHHHHHH--HhhCCCCeeeeeeeEEe-----CCCce
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEI--LGSIKHRYLVNLRGYCN-----SPTSK 378 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~--l~~l~h~niv~l~g~~~-----~~~~~ 378 (594)
.++|...+.||+|+||.||+|.. +++.||||++..... ..+..|.++ +..++||||+++++.+. .....
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~---~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 87 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANR---QNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEY 87 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccch---hhHHHHHHHHHHHhccCcchhhheecccccccCCCceE
Confidence 56888899999999999999976 589999999875332 334444444 55689999999998542 23356
Q ss_pred EEEEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcC------CCCeeeCCCCCCCeEecCCCcEEEeecc
Q 007668 379 LLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDC------SPRIIHRDIKSSNILLDGNLEARVSDFG 452 (594)
Q Consensus 379 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~------~~~ivH~Dlk~~NIll~~~~~~~l~Dfg 452 (594)
++||||+++|+|.+++... ..++..+..++.||+.||+|||+.+ .++|+||||||+|||++.++.+||+|||
T Consensus 88 ~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG 165 (336)
T 3g2f_A 88 LLVMEYYPNGSLXKYLSLH--TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFG 165 (336)
T ss_dssp EEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCT
T ss_pred EEEEecCCCCcHHHHHhhc--ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeecc
Confidence 8999999999999999754 3589999999999999999999431 1299999999999999999999999999
Q ss_pred cccccccCCc-------eeeeeeecccCccCcccccc-------CCCCccchhhhHHHHHHHHHhCCCCCCcchhcccc-
Q 007668 453 LAKLLEDEES-------HITTIVAGTFGYLAPEYMQS-------GRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGL- 517 (594)
Q Consensus 453 l~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~-------~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~- 517 (594)
++........ .......||+.|+|||++.+ ..++.++||||||+++|||++|..|+.........
T Consensus 166 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~ 245 (336)
T 3g2f_A 166 LSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQ 245 (336)
T ss_dssp TCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCC
T ss_pred ceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHH
Confidence 9987654321 11223469999999999876 35667899999999999999998775432211110
Q ss_pred -h---------HHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccCCCCCc
Q 007668 518 -N---------IVGWLNFLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVMTPCPS 586 (594)
Q Consensus 518 -~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~~~~~~~ 586 (594)
. ..............+..+...+. .....+..+.+++.+||+.||++|||++|+++.|++.+......
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~~~ 323 (336)
T 3g2f_A 246 MAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWK-ENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWERN 323 (336)
T ss_dssp CTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCC-CCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCCC-
T ss_pred HhhhcccCCCchHHHHHhhhcccccCCCCCcccc-cccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHHhc
Confidence 0 00111111112222222222221 23456678999999999999999999999999999877655443
No 119
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=2.8e-40 Score=338.59 Aligned_cols=245 Identities=26% Similarity=0.405 Sum_probs=200.4
Q ss_pred cCCCccceeeeecceEEEEEEe-cCCcEEEEEeecccc---hhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEEE
Q 007668 307 ETLDDDHIIGSGGFGTVYKLAM-DDGNVFALKRIDKLN---EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIY 382 (594)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ 382 (594)
+.|...+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|++++++++||||+++++++.+....++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 4577889999999999999976 578999999987432 223457889999999999999999999999999999999
Q ss_pred EccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccCCc
Q 007668 383 DFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEES 462 (594)
Q Consensus 383 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~~ 462 (594)
||++ |+|.+.+......+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||++......
T Consensus 134 e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~-- 207 (348)
T 1u5q_A 134 EYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-- 207 (348)
T ss_dssp ECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB--
T ss_pred ecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCCC--
Confidence 9996 789888876667899999999999999999999964 9999999999999999999999999999866532
Q ss_pred eeeeeeecccCccCccccc---cCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCCC
Q 007668 463 HITTIVAGTFGYLAPEYMQ---SGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPN 539 (594)
Q Consensus 463 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (594)
....||+.|+|||++. .+.++.++||||||+++|||++|+.||...... .......... ....
T Consensus 208 ---~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~------~~~~~~~~~~-~~~~---- 273 (348)
T 1u5q_A 208 ---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM------SALYHIAQNE-SPAL---- 273 (348)
T ss_dssp ---CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH------HHHHHHHHSC-CCCC----
T ss_pred ---CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH------HHHHHHHhcC-CCCC----
Confidence 2346899999999984 567899999999999999999999998653221 1111111111 1111
Q ss_pred CCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 540 CEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 540 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
.....+..+.+++.+||+.||++|||++++++
T Consensus 274 ---~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~ 305 (348)
T 1u5q_A 274 ---QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK 305 (348)
T ss_dssp ---CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred ---CCCCCCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence 11223466889999999999999999999975
No 120
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=1.7e-40 Score=336.28 Aligned_cols=262 Identities=22% Similarity=0.359 Sum_probs=189.0
Q ss_pred hcCCCccceeeeecceEEEEEEec-CCcEEEEEeecccc-hhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEEEE
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLN-EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYD 383 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e 383 (594)
.++|+..+.||+|+||.||+|... +++.||+|+++... ....+.+.+|++++++++||||+++++++.++...++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 457888999999999999999765 58999999987533 2334678899999999999999999999999999999999
Q ss_pred ccCCCchhhhhhhcC-----CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccc
Q 007668 384 FLPGGSLDEALHERS-----EQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLE 458 (594)
Q Consensus 384 ~~~~gsL~~~l~~~~-----~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~ 458 (594)
|++ |+|.+++.... ..+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||++....
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHE---NKILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 997 69999887532 458999999999999999999995 499999999999999999999999999998765
Q ss_pred cCCceeeeeeecccCccCcccccc-CCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhc--cccc---
Q 007668 459 DEESHITTIVAGTFGYLAPEYMQS-GRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLIS--EDRQ--- 532 (594)
Q Consensus 459 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~--~~~~--- 532 (594)
.... ......||+.|+|||++.+ ..++.++||||||+++|||++|+.||............ ....-. ....
T Consensus 160 ~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i--~~~~~~~~~~~~~~~ 236 (317)
T 2pmi_A 160 IPVN-TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLI--FDIMGTPNESLWPSV 236 (317)
T ss_dssp SCCC-CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH--HHHHCSCCTTTCGGG
T ss_pred CCcc-cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHH--HHHhCCCChhHhhhh
Confidence 3322 1233468999999999876 46899999999999999999999999764332111100 000000 0000
Q ss_pred --ccccCCCCC----C---------CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 533 --REIIDPNCE----G---------VQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 533 --~~~~~~~~~----~---------~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
.....+... . ........+.+++.+||+.||++|||++|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 237 TKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp GGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 000000000 0 01123457899999999999999999999875
No 121
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=1e-40 Score=337.90 Aligned_cols=261 Identities=24% Similarity=0.334 Sum_probs=206.4
Q ss_pred hcCCCccceeeeecceEEEEEEe-cCCcEEEEEeecccchhhHHHHHHHHHHHhhCCCCeeeeeeeEEe----CCCceEE
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAM-DDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCN----SPTSKLL 380 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~----~~~~~~l 380 (594)
.++|...+.||+|+||.||++.. .+++.||||++........+.+.+|+++++.++||||+++++++. .....++
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 107 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL 107 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence 35788899999999999999986 578999999997766666778999999999999999999999986 3456789
Q ss_pred EEEccCCCchhhhhhh---cCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeeccccccc
Q 007668 381 IYDFLPGGSLDEALHE---RSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLL 457 (594)
Q Consensus 381 v~e~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~ 457 (594)
|+||+++|+|.+++.. ....+++..+..++.||+.||+|||+. +|+||||||+||+++.++.++|+|||++...
T Consensus 108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~ 184 (317)
T 2buj_A 108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQA 184 (317)
T ss_dssp EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSCEES
T ss_pred EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcchhc
Confidence 9999999999999875 356799999999999999999999964 9999999999999999999999999998765
Q ss_pred ccCCce--------eeeeeecccCccCccccccCC---CCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHH
Q 007668 458 EDEESH--------ITTIVAGTFGYLAPEYMQSGR---ATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFL 526 (594)
Q Consensus 458 ~~~~~~--------~~~~~~gt~~y~aPE~~~~~~---~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 526 (594)
...... ......||+.|+|||.+.+.. ++.++||||||+++|||++|+.||......... ....
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~-~~~~---- 259 (317)
T 2buj_A 185 CIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDS-VALA---- 259 (317)
T ss_dssp CEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSC-HHHH----
T ss_pred ccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccch-hhHH----
Confidence 421110 011235799999999987554 688999999999999999999998653322111 1110
Q ss_pred hcccccccccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccCC
Q 007668 527 ISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVMT 582 (594)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~~~ 582 (594)
... ... .+ .....+..+.+++.+||+.||++|||++++++.|+.....
T Consensus 260 ~~~-~~~---~~----~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~ 307 (317)
T 2buj_A 260 VQN-QLS---IP----QSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPP 307 (317)
T ss_dssp HHC-C-----CC----CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCC
T ss_pred hhc-cCC---CC----ccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCC
Confidence 000 000 00 1123346799999999999999999999999999876543
No 122
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.3e-41 Score=342.98 Aligned_cols=263 Identities=28% Similarity=0.443 Sum_probs=210.2
Q ss_pred cCCCccceeeeecceEEEEEEe-----cCCcEEEEEeecccchhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCC--ceE
Q 007668 307 ETLDDDHIIGSGGFGTVYKLAM-----DDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPT--SKL 379 (594)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~--~~~ 379 (594)
++|...+.||+|+||.||++.. .+++.||||++........+.+.+|++++++++||||+++++++.... ..+
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 120 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 120 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCE
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceE
Confidence 4678889999999999999973 468999999998766666778999999999999999999999986544 678
Q ss_pred EEEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeeccccccccc
Q 007668 380 LIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLED 459 (594)
Q Consensus 380 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~ 459 (594)
+|+||+++++|.+++......+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.++|+|||++.....
T Consensus 121 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~ 197 (326)
T 2w1i_A 121 LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 197 (326)
T ss_dssp EEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCTTCEECCS
T ss_pred EEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHh---CCEeccCCCcceEEEcCCCcEEEecCcchhhccc
Confidence 9999999999999998776779999999999999999999995 4999999999999999999999999999987765
Q ss_pred CCceee--eeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcc------c---chHHHHHHHHhc
Q 007668 460 EESHIT--TIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEK------G---LNIVGWLNFLIS 528 (594)
Q Consensus 460 ~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~------~---~~~~~~~~~~~~ 528 (594)
...... ....++..|+|||.+.+..++.++||||||+++|||++|..|+......- . ..........+.
T Consensus 198 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (326)
T 2w1i_A 198 DKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLK 277 (326)
T ss_dssp SCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHH
T ss_pred cccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhh
Confidence 433221 23456778999999998889999999999999999999999976432110 0 000000011111
Q ss_pred ccccccccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccc
Q 007668 529 EDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEV 580 (594)
Q Consensus 529 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~ 580 (594)
... ....+...+..+.+++.+||+.||++|||+.|+++.|++..
T Consensus 278 ~~~--------~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~ 321 (326)
T 2w1i_A 278 NNG--------RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 321 (326)
T ss_dssp TTC--------CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred cCC--------CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 110 01112334567999999999999999999999999998753
No 123
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=2.4e-40 Score=345.06 Aligned_cols=264 Identities=20% Similarity=0.294 Sum_probs=203.0
Q ss_pred hcCCCccceeeee--cceEEEEEEec-CCcEEEEEeecccc--hhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEE
Q 007668 306 LETLDDDHIIGSG--GFGTVYKLAMD-DGNVFALKRIDKLN--EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLL 380 (594)
Q Consensus 306 ~~~~~~~~~lG~G--~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l 380 (594)
..+|+..+.||+| +||.||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++.+....++
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 4578899999999 99999999876 68999999997532 3445678899999999999999999999999999999
Q ss_pred EEEccCCCchhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeeccccccccc
Q 007668 381 IYDFLPGGSLDEALHER-SEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLED 459 (594)
Q Consensus 381 v~e~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~ 459 (594)
||||+++|+|.+++... ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||.+.....
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~ 180 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHH---MGYVHRSVKASHILISVDGKVYLSGLRSNLSMIS 180 (389)
T ss_dssp EEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCGGGCEECEE
T ss_pred EEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEcccccceeecc
Confidence 99999999999999764 3569999999999999999999995 4999999999999999999999999999875432
Q ss_pred CCce------eeeeeecccCccCcccccc--CCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhc---
Q 007668 460 EESH------ITTIVAGTFGYLAPEYMQS--GRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLIS--- 528 (594)
Q Consensus 460 ~~~~------~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~--- 528 (594)
.... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ ..........
T Consensus 181 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~~~~~~~~~~~~~ 258 (389)
T 3gni_B 181 HGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQM--LLEKLNGTVPCLL 258 (389)
T ss_dssp TTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTH--HHHC---------
T ss_pred ccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHH--HHHHhcCCCCccc
Confidence 2211 1122468999999999987 5789999999999999999999999976332211 0000000000
Q ss_pred ------cc-------------ccccc----------cCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 529 ------ED-------------RQREI----------IDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 529 ------~~-------------~~~~~----------~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
.. ..... .+..........+..+.+|+.+||+.||++|||++|+++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~ 333 (389)
T 3gni_B 259 DTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLN 333 (389)
T ss_dssp -----------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred cccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 00 00000 000000122334567999999999999999999999985
No 124
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.1e-40 Score=335.03 Aligned_cols=268 Identities=25% Similarity=0.380 Sum_probs=202.1
Q ss_pred HHhcCCCccceeeeecceEEEEEEecCCcEEEEEeecccchhhHHHHHHHHHHHhh--CCCCeeeeeeeEEeCC----Cc
Q 007668 304 KKLETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGS--IKHRYLVNLRGYCNSP----TS 377 (594)
Q Consensus 304 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~g~~~~~----~~ 377 (594)
...++|...+.||+|+||.||+|... ++.||||++.... ...+.+|.+++.. ++||||+++++++... ..
T Consensus 34 ~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 109 (337)
T 3mdy_A 34 TIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQ 109 (337)
T ss_dssp THHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCE
T ss_pred ccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCc
Confidence 34578999999999999999999876 8999999986533 2344555555554 4899999999998776 67
Q ss_pred eEEEEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcC-----CCCeeeCCCCCCCeEecCCCcEEEeecc
Q 007668 378 KLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDC-----SPRIIHRDIKSSNILLDGNLEARVSDFG 452 (594)
Q Consensus 378 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~-----~~~ivH~Dlk~~NIll~~~~~~~l~Dfg 452 (594)
.++||||+++|+|.++++. ..+++..+..++.|++.||+|||+.+ .++|+||||||+||+++.++.+||+|||
T Consensus 110 ~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg 187 (337)
T 3mdy_A 110 LYLITDYHENGSLYDYLKS--TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLG 187 (337)
T ss_dssp EEEEECCCTTCBHHHHHHH--CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCT
T ss_pred eEEEEeccCCCcHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCC
Confidence 8999999999999999975 35899999999999999999999431 2299999999999999999999999999
Q ss_pred cccccccCCceee---eeeecccCccCccccccCCCCcc------chhhhHHHHHHHHHhC----------CCCCCcchh
Q 007668 453 LAKLLEDEESHIT---TIVAGTFGYLAPEYMQSGRATEK------TDVYSFGVLVLEVLSG----------KRPTDASFI 513 (594)
Q Consensus 453 l~~~~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~------~Dv~s~G~vl~elltg----------~~p~~~~~~ 513 (594)
++........... ....||+.|+|||++.+...+.+ +||||||+++|||++| +.||.....
T Consensus 188 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~ 267 (337)
T 3mdy_A 188 LAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVP 267 (337)
T ss_dssp TCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSC
T ss_pred CceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcC
Confidence 9986654332211 24579999999999987766655 9999999999999999 555543221
Q ss_pred cccchHHHHHHHHhcccccccccCCCCCC--CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccCCC
Q 007668 514 EKGLNIVGWLNFLISEDRQREIIDPNCEG--VQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVMTP 583 (594)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~~~~ 583 (594)
... .... ......... ..+..+. .....+..+.+++.+||+.||++|||++||++.|++.....
T Consensus 268 ~~~-~~~~-~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 333 (337)
T 3mdy_A 268 SDP-SYED-MREIVCIKK----LRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQ 333 (337)
T ss_dssp SSC-CHHH-HHHHHTTSC----CCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred CCC-chhh-hHHHHhhhc----cCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhc
Confidence 111 1111 111111111 1111111 12366788999999999999999999999999999876543
No 125
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=1.2e-40 Score=336.41 Aligned_cols=258 Identities=24% Similarity=0.369 Sum_probs=195.7
Q ss_pred hcCCCccceeeeecceEEEEEEe-cCCcEEEEEeeccc---chhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCce---
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAM-DDGNVFALKRIDKL---NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSK--- 378 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~--- 378 (594)
.++|+..+.||+|+||.||++.. .+++.||||++... .......+.+|++++.+++||||+++++++......
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 35788899999999999999976 57899999999753 233346788999999999999999999998665544
Q ss_pred -EEEEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeeccccccc
Q 007668 379 -LLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLL 457 (594)
Q Consensus 379 -~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~ 457 (594)
++||||+++++|.++++.. ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~ 166 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTE-GPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAI 166 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC---
T ss_pred cEEEEecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCcccc
Confidence 8999999999999999764 5699999999999999999999954 9999999999999999999999999999876
Q ss_pred ccCCc--eeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccc
Q 007668 458 EDEES--HITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREI 535 (594)
Q Consensus 458 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 535 (594)
..... .......||+.|+|||++.+..++.++||||||+++|||++|+.||....... ..............
T Consensus 167 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~------~~~~~~~~~~~~~~ 240 (311)
T 3ork_A 167 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS------VAYQHVREDPIPPS 240 (311)
T ss_dssp ---------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH------HHHHHHHCCCCCHH
T ss_pred cccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH------HHHHHhcCCCCCcc
Confidence 54322 12234568999999999999999999999999999999999999997643221 11111111100000
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHH-HHHhcc
Q 007668 536 IDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVV-QILESE 579 (594)
Q Consensus 536 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~-~~L~~~ 579 (594)
......+..+.+++.+||+.||++||++.+++ ..+.+.
T Consensus 241 ------~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 279 (311)
T 3ork_A 241 ------ARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV 279 (311)
T ss_dssp ------HHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred ------cccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence 00112346789999999999999999765544 455443
No 126
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=1.3e-40 Score=341.22 Aligned_cols=249 Identities=21% Similarity=0.327 Sum_probs=203.4
Q ss_pred HhcCCCccceeeeecceEEEEEEecC-CcEEEEEeeccc---chhhHHHHHHHHHHHhhC-CCCeeeeeeeEEeCCCceE
Q 007668 305 KLETLDDDHIIGSGGFGTVYKLAMDD-GNVFALKRIDKL---NEGFDRFFERELEILGSI-KHRYLVNLRGYCNSPTSKL 379 (594)
Q Consensus 305 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~ 379 (594)
..++|...+.||+|+||.||+|.... ++.||+|++++. .....+.+..|.+++..+ +||||+++++++.+....+
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 35688899999999999999998764 788999999753 223356688899999988 7999999999999999999
Q ss_pred EEEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeeccccccccc
Q 007668 380 LIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLED 459 (594)
Q Consensus 380 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~ 459 (594)
+||||+++|+|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++++||+|||+++....
T Consensus 98 lv~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 173 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQV-GRFKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 173 (353)
T ss_dssp EEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCEEeccCCHHHEEEcCCCcEEEEeCCccccccc
Confidence 999999999999999764 469999999999999999999995 4999999999999999999999999999986433
Q ss_pred CCceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCCC
Q 007668 460 EESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPN 539 (594)
Q Consensus 460 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (594)
.. ......+||+.|+|||++.+..++.++||||||+++|||++|+.||...... .......... .
T Consensus 174 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~------~~~~~i~~~~-~------- 238 (353)
T 2i0e_A 174 DG-VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED------ELFQSIMEHN-V------- 238 (353)
T ss_dssp TT-CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHCC-C-------
T ss_pred CC-cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHH------HHHHHHHhCC-C-------
Confidence 22 2234567999999999999999999999999999999999999999764321 1111111111 0
Q ss_pred CCCCCHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 007668 540 CEGVQSESLDALLAVATQCVSSSPDDRPT-----MHRVVQ 574 (594)
Q Consensus 540 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~ev~~ 574 (594)
..+...+..+.+++.+||+.||++||+ ++++++
T Consensus 239 --~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 239 --AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp --CCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred --CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 112234467899999999999999996 466653
No 127
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=2.5e-40 Score=336.05 Aligned_cols=249 Identities=22% Similarity=0.352 Sum_probs=180.2
Q ss_pred ccceeeeecceEEEEEEec-CCcEEEEEeecccchhhHHHHHHHHHHHhhCC-CCeeeeeeeEEeCCCceEEEEEccCCC
Q 007668 311 DDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNEGFDRFFERELEILGSIK-HRYLVNLRGYCNSPTSKLLIYDFLPGG 388 (594)
Q Consensus 311 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~lv~e~~~~g 388 (594)
..+.||+|+||.||++... +++.||||++... ....+.+|++++..++ ||||+++++++.+....++||||+++|
T Consensus 15 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~ 91 (325)
T 3kn6_A 15 KDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGG 91 (325)
T ss_dssp TSCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred CCCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCC
Confidence 4588999999999999775 5899999998653 3456788999999997 999999999999999999999999999
Q ss_pred chhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCC---cEEEeecccccccccCCceee
Q 007668 389 SLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNL---EARVSDFGLAKLLEDEESHIT 465 (594)
Q Consensus 389 sL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~---~~~l~Dfgl~~~~~~~~~~~~ 465 (594)
+|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+||+++.++ .+||+|||+++....... ..
T Consensus 92 ~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~-~~ 166 (325)
T 3kn6_A 92 ELFERIKKK-KHFSETEASYIMRKLVSAVSHMHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ-PL 166 (325)
T ss_dssp BHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC------
T ss_pred cHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCC-cc
Confidence 999999764 679999999999999999999995 4999999999999998665 899999999986654332 23
Q ss_pred eeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhccc-chHHHHHHHHhcccccccccCCCCCC-C
Q 007668 466 TIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKG-LNIVGWLNFLISEDRQREIIDPNCEG-V 543 (594)
Q Consensus 466 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 543 (594)
....||+.|+|||++.+..++.++||||+|+++|||++|+.||........ ............ ... .... .
T Consensus 167 ~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~-~~~------~~~~~~ 239 (325)
T 3kn6_A 167 KTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKK-GDF------SFEGEA 239 (325)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTT-TCC------CCCSHH
T ss_pred cccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHc-CCC------CCCccc
Confidence 345689999999999999999999999999999999999999976433211 111111111111 100 0000 0
Q ss_pred CHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 544 QSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 544 ~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
....+..+.+|+.+||+.||++|||++|+++
T Consensus 240 ~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 240 WKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp HHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred ccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 1224567999999999999999999999873
No 128
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=9.5e-40 Score=329.69 Aligned_cols=259 Identities=19% Similarity=0.349 Sum_probs=198.2
Q ss_pred hcCCCccceeeeecceEEEEEEe-cCCcEEEEEeeccc---chhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEE
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAM-DDGNVFALKRIDKL---NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLI 381 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv 381 (594)
..+|...+.||+|+||.||+|.. .+|+.||+|++... .......+.+|++++++++||||+++++++.+....++|
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 110 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 110 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence 46788899999999999999976 57899999998752 334456789999999999999999999999999999999
Q ss_pred EEccCCCchhhhhhh---cCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccc
Q 007668 382 YDFLPGGSLDEALHE---RSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLE 458 (594)
Q Consensus 382 ~e~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~ 458 (594)
|||+++++|.+++.. ....+++..+..++.||+.||.|||+ .+++||||||+||+++.++.++|+|||++....
T Consensus 111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~ 187 (310)
T 2wqm_A 111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFS 187 (310)
T ss_dssp EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence 999999999999874 34569999999999999999999995 499999999999999999999999999998665
Q ss_pred cCCceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCC
Q 007668 459 DEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDP 538 (594)
Q Consensus 459 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 538 (594)
.... ......|++.|+|||.+.+..++.++||||||+++|||++|+.||...... ......... .......
T Consensus 188 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~----~~~~~~~~~-~~~~~~~--- 258 (310)
T 2wqm_A 188 SKTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN----LYSLCKKIE-QCDYPPL--- 258 (310)
T ss_dssp ------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CC----HHHHHHHHH-TTCSCCC---
T ss_pred CCCc-cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchh----HHHHHHHhh-cccCCCC---
Confidence 4322 223356899999999999999999999999999999999999998653211 111111111 1111110
Q ss_pred CCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccc
Q 007668 539 NCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEV 580 (594)
Q Consensus 539 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~ 580 (594)
.....+..+.+++.+||+.||++|||+++|++.|++..
T Consensus 259 ----~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~ 296 (310)
T 2wqm_A 259 ----PSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMH 296 (310)
T ss_dssp ----CTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ----cccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 11223467999999999999999999999999998753
No 129
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=1.5e-40 Score=330.27 Aligned_cols=246 Identities=29% Similarity=0.485 Sum_probs=200.8
Q ss_pred hcCCCccceeeeecceEEEEEEec-CCcEEEEEeeccc---chhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEE
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKL---NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLI 381 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv 381 (594)
.++|...+.||+|+||.||+|... ++..||+|++... .......+.+|++++++++||||+++++++.+....++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 567889999999999999999765 5678999998653 223356789999999999999999999999999999999
Q ss_pred EEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccCC
Q 007668 382 YDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEE 461 (594)
Q Consensus 382 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~ 461 (594)
|||+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.++|+|||++.......
T Consensus 88 ~e~~~~~~l~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~ 163 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKL-SKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 163 (279)
T ss_dssp ECCCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---TTTCEECCCCGGGEEECTTSCEEECSCCEESCC----
T ss_pred EecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHhEEEcCCCCEEEEeccccccCCccc
Confidence 9999999999999764 56899999999999999999999 4599999999999999999999999999986544322
Q ss_pred ceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCCCCC
Q 007668 462 SHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCE 541 (594)
Q Consensus 462 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (594)
.....|++.|+|||.+.+..++.++||||+|+++|+|++|+.||....... ........ ...
T Consensus 164 ---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~------~~~~~~~~-------~~~-- 225 (279)
T 3fdn_A 164 ---RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE------TYKRISRV-------EFT-- 225 (279)
T ss_dssp -------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHHHHT-------CCC--
T ss_pred ---ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHH------HHHHHHhC-------CCC--
Confidence 234568999999999999999999999999999999999999997543221 11111100 001
Q ss_pred CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 542 GVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 542 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
.+...+..+.+++.+||+.||++|||++|+++
T Consensus 226 -~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 257 (279)
T 3fdn_A 226 -FPDFVTEGARDLISRLLKHNPSQRPMLREVLE 257 (279)
T ss_dssp -CCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred -CCCcCCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 11223467889999999999999999999996
No 130
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=5.7e-40 Score=336.71 Aligned_cols=250 Identities=23% Similarity=0.387 Sum_probs=188.8
Q ss_pred hcCCCccceeeeecceEEEEEEec-CCcEEEEEeecccchhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEEEEc
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDF 384 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~ 384 (594)
.+.|...+.||+|+||.||+|... +++.||||+++... ..+.+.+|++++.+++||||+++++++.+....++||||
T Consensus 52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 129 (349)
T 2w4o_A 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLEL 129 (349)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEe
Confidence 456888899999999999999876 47899999987643 245688999999999999999999999999999999999
Q ss_pred cCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecC---CCcEEEeecccccccccCC
Q 007668 385 LPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDG---NLEARVSDFGLAKLLEDEE 461 (594)
Q Consensus 385 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~---~~~~~l~Dfgl~~~~~~~~ 461 (594)
+++|+|.+++... ..+++..+..++.||+.||.|||+. +|+||||||+||+++. ++.+||+|||+++......
T Consensus 130 ~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 205 (349)
T 2w4o_A 130 VTGGELFDRIVEK-GYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQV 205 (349)
T ss_dssp CCSCBHHHHHTTC-SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC---------
T ss_pred CCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCccccccCccc
Confidence 9999999999763 5689999999999999999999954 9999999999999975 8899999999998654332
Q ss_pred ceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCCCCC
Q 007668 462 SHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCE 541 (594)
Q Consensus 462 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (594)
......||+.|+|||++.+..++.++||||||+++|||++|+.||....... .......... .....+
T Consensus 206 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-----~~~~~i~~~~--~~~~~~--- 273 (349)
T 2w4o_A 206 --LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQ-----FMFRRILNCE--YYFISP--- 273 (349)
T ss_dssp ---------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHH-----HHHHHHHTTC--CCCCTT---
T ss_pred --ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccH-----HHHHHHHhCC--CccCCc---
Confidence 2234568999999999999999999999999999999999999986532211 0111111111 011111
Q ss_pred CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 542 GVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 542 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
.....+..+.+++.+||+.||++|||+.|+++
T Consensus 274 -~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 274 -WWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp -TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred -hhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11234467899999999999999999999886
No 131
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=2.2e-40 Score=331.21 Aligned_cols=256 Identities=24% Similarity=0.393 Sum_probs=205.0
Q ss_pred hcCCCccc-eeeeecceEEEEEEec---CCcEEEEEeecccc--hhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceE
Q 007668 306 LETLDDDH-IIGSGGFGTVYKLAMD---DGNVFALKRIDKLN--EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKL 379 (594)
Q Consensus 306 ~~~~~~~~-~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 379 (594)
.++|...+ .||+|+||.||+|... +++.||||+++... ....+.+.+|+++++.++||||+++++++ +....+
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~ 93 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWM 93 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEE
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcE
Confidence 35667777 9999999999999543 46789999997532 33356799999999999999999999999 556789
Q ss_pred EEEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeeccccccccc
Q 007668 380 LIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLED 459 (594)
Q Consensus 380 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~ 459 (594)
+||||+++++|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.++|+|||++.....
T Consensus 94 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 169 (291)
T 1xbb_A 94 LVMEMAELGPLNKYLQQN-RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRA 169 (291)
T ss_dssp EEEECCTTEEHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECCT
T ss_pred EEEEeCCCCCHHHHHHhC-cCCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCcceeecc
Confidence 999999999999999763 5699999999999999999999954 999999999999999999999999999987765
Q ss_pred CCceee--eeeecccCccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHHHHhccccccccc
Q 007668 460 EESHIT--TIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLNFLISEDRQREII 536 (594)
Q Consensus 460 ~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 536 (594)
...... ....+++.|+|||.+.+..++.++||||||+++|||++ |+.||....... .. ... ....
T Consensus 170 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~---~~---~~~-~~~~----- 237 (291)
T 1xbb_A 170 DENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE---VT---AML-EKGE----- 237 (291)
T ss_dssp TCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH---HH---HHH-HTTC-----
T ss_pred CCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHH---HH---HHH-HcCC-----
Confidence 443322 22346789999999998889999999999999999999 999987643221 11 111 1111
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccC
Q 007668 537 DPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVM 581 (594)
Q Consensus 537 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~~ 581 (594)
....+...+..+.+++.+||+.||++|||+.++++.|++.+.
T Consensus 238 ---~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 279 (291)
T 1xbb_A 238 ---RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 279 (291)
T ss_dssp ---CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred ---CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 011223345679999999999999999999999999987643
No 132
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=2.1e-40 Score=334.92 Aligned_cols=259 Identities=24% Similarity=0.364 Sum_probs=197.2
Q ss_pred HhcCCCccceeeeecceEEEEEEec----CCcEEEEEeeccc--chhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCc-
Q 007668 305 KLETLDDDHIIGSGGFGTVYKLAMD----DGNVFALKRIDKL--NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTS- 377 (594)
Q Consensus 305 ~~~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~- 377 (594)
..++|...+.||+|+||.||+|... .+..||+|.+... .....+.+.+|++++++++||||+++++++.+...
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 111 (313)
T 3brb_A 32 DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQ 111 (313)
T ss_dssp CGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC----
T ss_pred CHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecccc
Confidence 3567888899999999999999764 3457999998753 33345678999999999999999999999977553
Q ss_pred ----eEEEEEccCCCchhhhhhh-----cCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEE
Q 007668 378 ----KLLIYDFLPGGSLDEALHE-----RSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARV 448 (594)
Q Consensus 378 ----~~lv~e~~~~gsL~~~l~~-----~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l 448 (594)
.++|+||+++|+|.+++.. ....+++..++.++.||++||.||| +.+|+||||||+||+++.++.+||
T Consensus 112 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~kl 188 (313)
T 3brb_A 112 GIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLS---NRNFLHRDLAARNCMLRDDMTVCV 188 (313)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCSGGGEEECTTSCEEE
T ss_pred CCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEE
Confidence 4899999999999999853 2356999999999999999999999 459999999999999999999999
Q ss_pred eecccccccccCCce-eeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHHHH
Q 007668 449 SDFGLAKLLEDEESH-ITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLNFL 526 (594)
Q Consensus 449 ~Dfgl~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 526 (594)
+|||++......... ......+++.|+|||.+.+..++.++||||||+++|||++ |..||....... .....
T Consensus 189 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~------~~~~~ 262 (313)
T 3brb_A 189 ADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHE------MYDYL 262 (313)
T ss_dssp CSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG------HHHHH
T ss_pred eecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHH------HHHHH
Confidence 999999876543322 2233457889999999999999999999999999999999 888986543221 11111
Q ss_pred hcccccccccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccC
Q 007668 527 ISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVM 581 (594)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~~ 581 (594)
.... ....+...+..+.+++.+||+.||++|||+.++++.|++...
T Consensus 263 ~~~~---------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~ 308 (313)
T 3brb_A 263 LHGH---------RLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLE 308 (313)
T ss_dssp HTTC---------CCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HcCC---------CCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 1111 011122344679999999999999999999999999988654
No 133
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=2.2e-40 Score=351.59 Aligned_cols=252 Identities=21% Similarity=0.393 Sum_probs=207.3
Q ss_pred hcCCCccceeeeecceEEEEEEec-CCcEEEEEeecccc---hhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEE
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLN---EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLI 381 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv 381 (594)
..+|...+.||+|+||.||+|... +|+.||||++.... ....+.+.+|+++++.++||||+++++++......++|
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv 94 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV 94 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 357888899999999999999876 78999999997532 22346789999999999999999999999999999999
Q ss_pred EEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccCC
Q 007668 382 YDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEE 461 (594)
Q Consensus 382 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~ 461 (594)
|||+++|+|.+++.. ...+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 95 ~E~~~gg~L~~~l~~-~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~ 170 (476)
T 2y94_A 95 MEYVSGGELFDYICK-NGRLDEKESRRLFQQILSGVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 170 (476)
T ss_dssp EECCSSEEHHHHTTS-SSSCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTC
T ss_pred EeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH---HCCCCcccccHHHEEEecCCCeEEEeccchhhccccc
Confidence 999999999999975 356999999999999999999999 4599999999999999999999999999998765433
Q ss_pred ceeeeeeecccCccCccccccCCC-CccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCCCC
Q 007668 462 SHITTIVAGTFGYLAPEYMQSGRA-TEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNC 540 (594)
Q Consensus 462 ~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 540 (594)
. .....||+.|+|||++.+..+ +.++||||+|+++|||++|+.||+..... .......... .
T Consensus 171 ~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~------~~~~~i~~~~-----~---- 233 (476)
T 2y94_A 171 F--LRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP------TLFKKICDGI-----F---- 233 (476)
T ss_dssp C--BCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSH------HHHHHHHTTC-----C----
T ss_pred c--ccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHH------HHHHHHhcCC-----c----
Confidence 2 234579999999999988765 78999999999999999999999764221 1111111110 0
Q ss_pred CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHhcc
Q 007668 541 EGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ--ILESE 579 (594)
Q Consensus 541 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~--~L~~~ 579 (594)
..+...+..+.+++.+||+.||++|||++|+++ .++..
T Consensus 234 -~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~hp~~~~~ 273 (476)
T 2y94_A 234 -YTPQYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQD 273 (476)
T ss_dssp -CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHTT
T ss_pred -CCCccCCHHHHHHHHHHcCCCchhCcCHHHHHhCHHhhhc
Confidence 111223467899999999999999999999997 55543
No 134
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=5.7e-40 Score=338.19 Aligned_cols=252 Identities=23% Similarity=0.323 Sum_probs=193.4
Q ss_pred hcCCCccceeeeecceEEEEEEec-CCcEEEEEeecccchhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEEEEc
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDF 384 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~ 384 (594)
.++|...+.||+|+||.||++... +++.||+|++..... ..+.+.+|+.+++.++||||+++++++.+....++||||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 97 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY 97 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence 467889999999999999999876 789999999975433 346688999999999999999999999999999999999
Q ss_pred cCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCc--EEEeecccccccccCCc
Q 007668 385 LPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLE--ARVSDFGLAKLLEDEES 462 (594)
Q Consensus 385 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~--~~l~Dfgl~~~~~~~~~ 462 (594)
+++|+|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++. +||+|||+++......
T Consensus 98 ~~~~~L~~~l~~~-~~~~~~~~~~i~~ql~~~L~~LH~---~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~- 172 (361)
T 3uc3_A 98 ASGGELYERICNA-GRFSEDEARFFFQQLLSGVSYCHS---MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS- 172 (361)
T ss_dssp CCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHH---TTCCSCCCCGGGEEECSSSSCCEEECCCCCC--------
T ss_pred CCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCceEEEeecCccccccccC-
Confidence 9999999999763 469999999999999999999995 49999999999999987665 9999999997533222
Q ss_pred eeeeeeecccCccCccccccCCCCcc-chhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCCCCC
Q 007668 463 HITTIVAGTFGYLAPEYMQSGRATEK-TDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCE 541 (594)
Q Consensus 463 ~~~~~~~gt~~y~aPE~~~~~~~~~~-~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (594)
......||+.|+|||++.+..+..+ +||||+|+++|+|++|+.||........ ............. ..+
T Consensus 173 -~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~--~~~~~~~~~~~~~-------~~~ 242 (361)
T 3uc3_A 173 -QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRD--YRKTIQRILSVKY-------SIP 242 (361)
T ss_dssp ---------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCC--HHHHHHHHHTTCC-------CCC
T ss_pred -CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHH--HHHHHHHHhcCCC-------CCC
Confidence 2234569999999999988877655 8999999999999999999976433211 1111111111110 000
Q ss_pred CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 542 GVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 542 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
.....+..+.+|+.+||+.||++|||+.|+++
T Consensus 243 -~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~ 274 (361)
T 3uc3_A 243 -DDIRISPECCHLISRIFVADPATRISIPEIKT 274 (361)
T ss_dssp -TTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred -CcCCCCHHHHHHHHHHccCChhHCcCHHHHHh
Confidence 01123467899999999999999999999986
No 135
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.7e-40 Score=341.45 Aligned_cols=272 Identities=17% Similarity=0.227 Sum_probs=209.0
Q ss_pred cCCCccceeeeecceEEEEEEecC---------CcEEEEEeecccchhhHHHHHHHHHHHhhCCCCeeee----------
Q 007668 307 ETLDDDHIIGSGGFGTVYKLAMDD---------GNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVN---------- 367 (594)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~---------- 367 (594)
++|...+.||+|+||.||+|.... ++.||+|.+... +.+.+|++++.+++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 116 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL 116 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence 578889999999999999998764 789999998754 35788999999999999987
Q ss_pred -----eeeEEeC-CCceEEEEEccCCCchhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEe
Q 007668 368 -----LRGYCNS-PTSKLLIYDFLPGGSLDEALHER-SEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILL 440 (594)
Q Consensus 368 -----l~g~~~~-~~~~~lv~e~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll 440 (594)
+++++.. ....++||||+ +++|.+++... ...+++..+..++.||+.||+|||+. +|+||||||+||++
T Consensus 117 ~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIl~ 192 (352)
T 2jii_A 117 LAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAENIFV 192 (352)
T ss_dssp CSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGGGEEE
T ss_pred cCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEE
Confidence 5667655 67789999999 99999999864 46799999999999999999999954 99999999999999
Q ss_pred cCCC--cEEEeecccccccccCCcee------eeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcch
Q 007668 441 DGNL--EARVSDFGLAKLLEDEESHI------TTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASF 512 (594)
Q Consensus 441 ~~~~--~~~l~Dfgl~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~ 512 (594)
+.++ .+||+|||+++......... .....||+.|+|||++.+..++.++||||||+++|||++|+.||....
T Consensus 193 ~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 272 (352)
T 2jii_A 193 DPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCL 272 (352)
T ss_dssp ETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGT
T ss_pred cCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCC
Confidence 9988 89999999998765432211 123478999999999999999999999999999999999999997643
Q ss_pred hcccchHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccCC--CCCccccc
Q 007668 513 IEKGLNIVGWLNFLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVMT--PCPSDFYD 590 (594)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~~~--~~~~~~~~ 590 (594)
.... ......... .. ......+... .....+..+.+++.+||+.||++|||++++++.|++.+.. ..+.+-++
T Consensus 273 ~~~~-~~~~~~~~~-~~-~~~~~~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~~~~~~d 347 (352)
T 2jii_A 273 PNTE-DIMKQKQKF-VD-KPGPFVGPCG--HWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLRVSPYDPIG 347 (352)
T ss_dssp TCHH-HHHHHHHHH-HH-SCCCEECTTS--CEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCCTTSCCC
T ss_pred cCHH-HHHHHHHhc-cC-Chhhhhhhcc--ccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcCCCcCcccc
Confidence 2111 111111111 11 1111111110 0112246799999999999999999999999999987653 23334444
Q ss_pred cC
Q 007668 591 SN 592 (594)
Q Consensus 591 ~~ 592 (594)
|+
T Consensus 348 w~ 349 (352)
T 2jii_A 348 LP 349 (352)
T ss_dssp CC
T ss_pred Cc
Confidence 43
No 136
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.9e-40 Score=344.02 Aligned_cols=269 Identities=23% Similarity=0.305 Sum_probs=211.1
Q ss_pred cCCCccceeeeecceEEEEEEecC-CcEEEEEeecccc-hhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCC--ceEEEE
Q 007668 307 ETLDDDHIIGSGGFGTVYKLAMDD-GNVFALKRIDKLN-EGFDRFFERELEILGSIKHRYLVNLRGYCNSPT--SKLLIY 382 (594)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~--~~~lv~ 382 (594)
++|...+.||+|+||.||+|.... ++.||||++.... ....+.+.+|++++++++||||+++++++.... ..++||
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~ 88 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence 467888999999999999998764 8999999997533 233567889999999999999999999987655 679999
Q ss_pred EccCCCchhhhhhhcC--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEe----cCCCcEEEeecccccc
Q 007668 383 DFLPGGSLDEALHERS--EQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILL----DGNLEARVSDFGLAKL 456 (594)
Q Consensus 383 e~~~~gsL~~~l~~~~--~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll----~~~~~~~l~Dfgl~~~ 456 (594)
||+++|+|.+++.... ..+++..++.++.||+.||+|||+ .+|+||||||+|||+ +.++.+||+|||+++.
T Consensus 89 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~ 165 (396)
T 4eut_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE 165 (396)
T ss_dssp CCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEE
T ss_pred ecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHH---CCEEECCcCHHHEEEeecCCCceeEEEecCCCceE
Confidence 9999999999998543 239999999999999999999995 499999999999999 7778899999999987
Q ss_pred cccCCceeeeeeecccCccCcccccc--------CCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhc
Q 007668 457 LEDEESHITTIVAGTFGYLAPEYMQS--------GRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLIS 528 (594)
Q Consensus 457 ~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 528 (594)
...... .....||+.|+|||++.+ ..++.++||||||+++|||++|+.||......... .........
T Consensus 166 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~--~~~~~~~~~ 241 (396)
T 4eut_A 166 LEDDEQ--FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRN--KEVMYKIIT 241 (396)
T ss_dssp CCCGGG--SSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTC--HHHHHHHHH
T ss_pred ccCCCc--cccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccch--HHHHHHHhc
Confidence 654332 233568999999999865 46788999999999999999999998653322111 111111111
Q ss_pred ccccc---cc------------cCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccCC
Q 007668 529 EDRQR---EI------------IDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVMT 582 (594)
Q Consensus 529 ~~~~~---~~------------~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~~~ 582 (594)
..... .. ..+............+.+++.+||+.||++|||++|+++.++..+..
T Consensus 242 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 242 GKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp SCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred CCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 11000 00 00111234567788899999999999999999999999999886654
No 137
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=4.7e-40 Score=326.34 Aligned_cols=250 Identities=21% Similarity=0.271 Sum_probs=203.4
Q ss_pred hcCCCccceeeeecceEEEEEEecC-CcEEEEEeecccchhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEEEEc
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMDD-GNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDF 384 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~ 384 (594)
.++|+..+.||+|+||.||+|.... +..+|+|++........+.+.+|++++++++||||+++++++.+....++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL 87 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence 4568888999999999999997664 678999999876555577899999999999999999999999999999999999
Q ss_pred cCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEe---cCCCcEEEeecccccccccCC
Q 007668 385 LPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILL---DGNLEARVSDFGLAKLLEDEE 461 (594)
Q Consensus 385 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll---~~~~~~~l~Dfgl~~~~~~~~ 461 (594)
+++++|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+||++ +.++.++|+|||++.......
T Consensus 88 ~~~~~L~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~ 163 (277)
T 3f3z_A 88 CTGGELFERVVHK-RVFRESDAARIMKDVLSAVAYCHK---LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK 163 (277)
T ss_dssp CCSCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTS
T ss_pred cCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCcc
Confidence 9999999998764 568999999999999999999995 499999999999999 788899999999998765433
Q ss_pred ceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCCCCC
Q 007668 462 SHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCE 541 (594)
Q Consensus 462 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (594)
. .....||+.|+|||.+.+ .++.++||||+|+++|||++|+.||....... ......... .. ....
T Consensus 164 ~--~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~------~~~~~~~~~-~~-~~~~--- 229 (277)
T 3f3z_A 164 M--MRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSE------VMLKIREGT-FT-FPEK--- 229 (277)
T ss_dssp C--BCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHCC-CC-CCHH---
T ss_pred c--hhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHHH------HHHHHHhCC-CC-CCch---
Confidence 2 233568999999999865 48999999999999999999999997643221 111111100 00 0000
Q ss_pred CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 542 GVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 542 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
.....+..+.+++.+|++.||++|||+.++++
T Consensus 230 -~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 230 -DWLNVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp -HHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred -hhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00023467899999999999999999999985
No 138
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.1e-40 Score=339.40 Aligned_cols=249 Identities=19% Similarity=0.345 Sum_probs=195.3
Q ss_pred cCCCccceeeeecceEEEEEEecCCcEEEEEeeccc--chhhHHHHHHHHHHHhhCCC--CeeeeeeeEEeCCCceEEEE
Q 007668 307 ETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKL--NEGFDRFFERELEILGSIKH--RYLVNLRGYCNSPTSKLLIY 382 (594)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h--~niv~l~g~~~~~~~~~lv~ 382 (594)
++|...+.||+|+||.||++...+++.||||++... .....+.+.+|++++.+++| |||+++++++.+....++||
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 88 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 88 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEE
Confidence 467888999999999999999999999999998743 33445778999999999986 99999999999999999999
Q ss_pred EccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccCCc
Q 007668 383 DFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEES 462 (594)
Q Consensus 383 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~~ 462 (594)
| +.+++|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++ ++.+||+|||+++.......
T Consensus 89 e-~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~ 162 (343)
T 3dbq_A 89 E-CGNIDLNSWLKK-KKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT 162 (343)
T ss_dssp C-CCSEEHHHHHHH-SCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-----
T ss_pred e-CCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecccccccCcccc
Confidence 9 568899999986 35799999999999999999999964 999999999999997 57899999999987654432
Q ss_pred e-eeeeeecccCccCcccccc-----------CCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhccc
Q 007668 463 H-ITTIVAGTFGYLAPEYMQS-----------GRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISED 530 (594)
Q Consensus 463 ~-~~~~~~gt~~y~aPE~~~~-----------~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 530 (594)
. ......||+.|+|||++.+ ..++.++||||||+++|||++|+.||...... ...........
T Consensus 163 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-----~~~~~~~~~~~ 237 (343)
T 3dbq_A 163 SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ-----ISKLHAIIDPN 237 (343)
T ss_dssp -------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSH-----HHHHHHHHCTT
T ss_pred cccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhH-----HHHHHHHhcCC
Confidence 2 2334679999999999865 67899999999999999999999999653211 11111111111
Q ss_pred ccccccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 531 RQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 531 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
. . . ..+......+.+++.+||+.||++|||+.|+++
T Consensus 238 ~-~----~---~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~ 273 (343)
T 3dbq_A 238 H-E----I---EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA 273 (343)
T ss_dssp S-C----C---CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred c-c----c---CCcccCCHHHHHHHHHHcCCChhHCCCHHHHHh
Confidence 1 0 0 111122356889999999999999999999985
No 139
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=1.9e-40 Score=329.41 Aligned_cols=250 Identities=25% Similarity=0.375 Sum_probs=198.4
Q ss_pred hcCCCccceeeeecceEEEEEEecCCcEEEEEeecccchhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCC-CceEEEEEc
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSP-TSKLLIYDF 384 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~~~lv~e~ 384 (594)
.++|+..+.||+|+||.||++... |+.||||.++... ..+.+.+|++++++++||||+++++++.+. ...++|+||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 96 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 96 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEec
Confidence 467889999999999999999875 8899999987543 356789999999999999999999997554 468999999
Q ss_pred cCCCchhhhhhhcCC-CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccCCce
Q 007668 385 LPGGSLDEALHERSE-QLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESH 463 (594)
Q Consensus 385 ~~~gsL~~~l~~~~~-~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~~~ 463 (594)
+++++|.+++..... .+++..+..++.|++.||+|||+ .+++||||||+||+++.++.++|+|||++.......
T Consensus 97 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~-- 171 (278)
T 1byg_A 97 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-- 171 (278)
T ss_dssp CTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCEEECCCCC----------
T ss_pred CCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHh---CCccccCCCcceEEEeCCCcEEEeeccccccccccc--
Confidence 999999999976432 38999999999999999999995 499999999999999999999999999987654322
Q ss_pred eeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHHHHhcccccccccCCCCCC
Q 007668 464 ITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEG 542 (594)
Q Consensus 464 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 542 (594)
....+++.|+|||.+.+..++.++||||||+++|||++ |+.||......+ ......... . ..
T Consensus 172 --~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~------~~~~~~~~~------~---~~ 234 (278)
T 1byg_A 172 --DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD------VVPRVEKGY------K---MD 234 (278)
T ss_dssp ------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGG------HHHHHTTTC------C---CC
T ss_pred --cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH------HHHHHhcCC------C---CC
Confidence 22357889999999999999999999999999999998 999987643221 111111110 0 11
Q ss_pred CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccc
Q 007668 543 VQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEV 580 (594)
Q Consensus 543 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~ 580 (594)
.+...+..+.+++.+||+.||++|||+.|+++.|++..
T Consensus 235 ~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~ 272 (278)
T 1byg_A 235 APDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK 272 (278)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHH
Confidence 22334567999999999999999999999999998754
No 140
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.5e-40 Score=337.76 Aligned_cols=260 Identities=22% Similarity=0.314 Sum_probs=196.2
Q ss_pred cCCCccceeeeecceEEEEEEec-CCcEEEEEeecccchh-hHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEEEEc
Q 007668 307 ETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNEG-FDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDF 384 (594)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~ 384 (594)
++|...+.||+|+||.||+|... +++.||+|++...... ....+.+|++++++++||||+++++++.+....++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 57888899999999999999876 6899999998753321 122456799999999999999999999999999999999
Q ss_pred cCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccCCcee
Q 007668 385 LPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHI 464 (594)
Q Consensus 385 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~~~~ 464 (594)
++ |+|.+++......+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||++........ .
T Consensus 82 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~-~ 156 (324)
T 3mtl_A 82 LD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHR---QKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK-T 156 (324)
T ss_dssp CS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH---TTEEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred cc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCcCHHHEEECCCCCEEEccCcccccccCCcc-c
Confidence 96 69999998777789999999999999999999995 4999999999999999999999999999986543322 2
Q ss_pred eeeeecccCccCcccccc-CCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhccc---cccc------
Q 007668 465 TTIVAGTFGYLAPEYMQS-GRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISED---RQRE------ 534 (594)
Q Consensus 465 ~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~------ 534 (594)
.....||+.|+|||++.+ ..++.++||||+|+++|||++|+.||......+.. ..+....... ....
T Consensus 157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~---~~i~~~~~~~~~~~~~~~~~~~~ 233 (324)
T 3mtl_A 157 YDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQL---HFIFRILGTPTEETWPGILSNEE 233 (324)
T ss_dssp ------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH---HHHHHHHCCCCTTTSTTGGGCHH
T ss_pred cccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH---HHHHHHhCCCChHhchhhhcchh
Confidence 234568999999999876 56899999999999999999999999765332211 1111110000 0000
Q ss_pred ---ccCCCCC-----CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 535 ---IIDPNCE-----GVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 535 ---~~~~~~~-----~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
...+... .........+.+|+.+||+.||++|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 234 FKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp HHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 0000000 011123467889999999999999999999986
No 141
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=3.7e-40 Score=332.87 Aligned_cols=264 Identities=22% Similarity=0.307 Sum_probs=199.0
Q ss_pred hcCCCccceeeeecceEEEEEEec-CCcEEEEEeecccc--hhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEEE
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLN--EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIY 382 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ 382 (594)
.++|+..+.||+|+||.||+|... +|+.||+|++.... ....+.+.+|++++++++||||+++++++.+....++||
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVF 81 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEE
Confidence 357888999999999999999876 48999999986533 233567889999999999999999999999999999999
Q ss_pred EccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccCCc
Q 007668 383 DFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEES 462 (594)
Q Consensus 383 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~~ 462 (594)
||+++++|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.++|+|||++........
T Consensus 82 e~~~~~~l~~~~~~-~~~~~~~~~~~i~~~l~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 157 (311)
T 4agu_A 82 EYCDHTVLHELDRY-QRGVPEHLVKSITWQTLQAVNFCHK---HNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSD 157 (311)
T ss_dssp ECCSEEHHHHHHHT-SSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECC----
T ss_pred EeCCCchHHHHHhh-hcCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccc
Confidence 99999999998764 4569999999999999999999995 4999999999999999999999999999987653322
Q ss_pred eeeeeeecccCccCcccccc-CCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHH---------HHHHhccccc
Q 007668 463 HITTIVAGTFGYLAPEYMQS-GRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGW---------LNFLISEDRQ 532 (594)
Q Consensus 463 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~---------~~~~~~~~~~ 532 (594)
......||+.|+|||.+.+ ..++.++||||+|+++|+|++|+.||......+....... ..........
T Consensus 158 -~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (311)
T 4agu_A 158 -YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYF 236 (311)
T ss_dssp ---------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGG
T ss_pred -ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccccccccccccccc
Confidence 2234568999999999876 6789999999999999999999999976433221111100 0000000000
Q ss_pred ccccCCCCCC------CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 533 REIIDPNCEG------VQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 533 ~~~~~~~~~~------~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
.....+.... .....+..+.+++.+||+.||++|||++|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 237 SGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp TTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred ccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 0000000000 01234466899999999999999999999985
No 142
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.8e-40 Score=338.81 Aligned_cols=259 Identities=23% Similarity=0.266 Sum_probs=201.1
Q ss_pred HHHHHhcCCCccceeeeecceEEEEEEec-CCcEEEEEeeccc-----chhhHHHHHHHHHHHhhCCCCeeeeeeeEEeC
Q 007668 301 DIIKKLETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKL-----NEGFDRFFERELEILGSIKHRYLVNLRGYCNS 374 (594)
Q Consensus 301 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~ 374 (594)
++....++|...+.||+|+||.||+|... ++..||+|++... .....+.+.+|++++++++||||+++++++.+
T Consensus 20 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~ 99 (345)
T 3hko_A 20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED 99 (345)
T ss_dssp CHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred hhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc
Confidence 34555678899999999999999999764 6789999998643 23445789999999999999999999999999
Q ss_pred CCceEEEEEccCCCchhhhhhhc---------------------------------------CCCCCHHHHHHHHHHHHH
Q 007668 375 PTSKLLIYDFLPGGSLDEALHER---------------------------------------SEQLDWDARLNIIMGAAK 415 (594)
Q Consensus 375 ~~~~~lv~e~~~~gsL~~~l~~~---------------------------------------~~~l~~~~~~~i~~~ia~ 415 (594)
....++||||+++|+|.+++... ...+++..+..++.||+.
T Consensus 100 ~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~ 179 (345)
T 3hko_A 100 EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFS 179 (345)
T ss_dssp SSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHH
Confidence 99999999999999999998521 112357778899999999
Q ss_pred HHHHhhhcCCCCeeeCCCCCCCeEecCCC--cEEEeecccccccccCCc---eeeeeeecccCccCcccccc--CCCCcc
Q 007668 416 GLAYLHHDCSPRIIHRDIKSSNILLDGNL--EARVSDFGLAKLLEDEES---HITTIVAGTFGYLAPEYMQS--GRATEK 488 (594)
Q Consensus 416 ~L~~LH~~~~~~ivH~Dlk~~NIll~~~~--~~~l~Dfgl~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~--~~~~~~ 488 (594)
||+|||+. +|+||||||+||+++.++ .+||+|||++..+..... .......||+.|+|||.+.+ ..++.+
T Consensus 180 ~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~ 256 (345)
T 3hko_A 180 ALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPK 256 (345)
T ss_dssp HHHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTH
T ss_pred HHHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcH
Confidence 99999954 999999999999998766 899999999986643221 22344679999999999875 678999
Q ss_pred chhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCC
Q 007668 489 TDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPT 568 (594)
Q Consensus 489 ~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs 568 (594)
+||||||+++|||++|+.||......+ .......... ....+ .....+..+.+++.+||+.||++|||
T Consensus 257 ~DiwslG~il~el~~g~~pf~~~~~~~------~~~~~~~~~~--~~~~~----~~~~~~~~~~~li~~~l~~~p~~Rps 324 (345)
T 3hko_A 257 CDAWSAGVLLHLLLMGAVPFPGVNDAD------TISQVLNKKL--CFENP----NYNVLSPLARDLLSNLLNRNVDERFD 324 (345)
T ss_dssp HHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHCCC--CTTSG----GGGGSCHHHHHHHHHHSCSCTTTSCC
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCChHH------HHHHHHhccc--ccCCc----ccccCCHHHHHHHHHHcCCChhHCCC
Confidence 999999999999999999997643221 1111111110 00000 11123467899999999999999999
Q ss_pred HHHHHH
Q 007668 569 MHRVVQ 574 (594)
Q Consensus 569 ~~ev~~ 574 (594)
+.|+++
T Consensus 325 ~~~~l~ 330 (345)
T 3hko_A 325 AMRALQ 330 (345)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 999986
No 143
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=4.1e-40 Score=328.26 Aligned_cols=249 Identities=25% Similarity=0.374 Sum_probs=196.9
Q ss_pred cCCCccceeeeecceEEEEEEec-CCcEEEEEeecccc-hhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEEEEc
Q 007668 307 ETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLN-EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDF 384 (594)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~ 384 (594)
++|...+.||+|+||.||++... ++..+|+|++.... ....+.+.+|++++++++||||+++++++.+....++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 101 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET 101 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence 56788899999999999999764 58899999987543 33457899999999999999999999999999999999999
Q ss_pred cCCCchhhhhhh---cCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEe---cCCCcEEEeecccccccc
Q 007668 385 LPGGSLDEALHE---RSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILL---DGNLEARVSDFGLAKLLE 458 (594)
Q Consensus 385 ~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll---~~~~~~~l~Dfgl~~~~~ 458 (594)
+++|+|.+.+.. ....+++..+..++.|++.||+|||+ .+|+||||||+||++ +.++.+||+|||++....
T Consensus 102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~ 178 (285)
T 3is5_A 102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHS---QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK 178 (285)
T ss_dssp CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--
T ss_pred CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHh---CCEEECCCCHHHEEEecCCCCCCEEEEeeecceecC
Confidence 999999999864 24679999999999999999999995 499999999999999 456789999999998665
Q ss_pred cCCceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCC
Q 007668 459 DEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDP 538 (594)
Q Consensus 459 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 538 (594)
.... .....||+.|+|||.+. +.++.++||||||+++|||++|+.||........ .........
T Consensus 179 ~~~~--~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~------~~~~~~~~~------- 242 (285)
T 3is5_A 179 SDEH--STNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEV------QQKATYKEP------- 242 (285)
T ss_dssp ----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH------HHHHHHCCC-------
T ss_pred Cccc--CcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHH------HhhhccCCc-------
Confidence 4322 23456899999999876 5789999999999999999999999976432211 111111110
Q ss_pred CCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 539 NCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 539 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
............+.+++.+||+.||++|||++|+++
T Consensus 243 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 243 NYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp CCCC--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred ccccccCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000001113367889999999999999999999985
No 144
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=2.5e-40 Score=327.99 Aligned_cols=246 Identities=22% Similarity=0.376 Sum_probs=180.8
Q ss_pred hcCCCccceeeeecceEEEEEEe-cCCcEEEEEeeccc---chhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEE
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAM-DDGNVFALKRIDKL---NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLI 381 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv 381 (594)
.++|+..+.||+|+||.||+|.. .+++.||+|++... .....+.+.+|++++++++||||+++++++.+....++|
T Consensus 12 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (275)
T 2eue_A 12 IGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp CCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEE
T ss_pred ccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEE
Confidence 35789999999999999999975 46899999998753 223356789999999999999999999999999999999
Q ss_pred EEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccCC
Q 007668 382 YDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEE 461 (594)
Q Consensus 382 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~ 461 (594)
|||+ +++|.+.+... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++.......
T Consensus 92 ~e~~-~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 166 (275)
T 2eue_A 92 IEYA-GNELFDYIVQR-DKMSEQEARRFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166 (275)
T ss_dssp EECC-CEEHHHHHHTS-SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTSCEEECCSSCC-------
T ss_pred ehhc-CCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCCeeccCChHhEEECCCCCEEEeecccceeccCcc
Confidence 9999 77888888653 569999999999999999999995 499999999999999999999999999998655432
Q ss_pred ceeeeeeecccCccCccccccCCC-CccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCCCC
Q 007668 462 SHITTIVAGTFGYLAPEYMQSGRA-TEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNC 540 (594)
Q Consensus 462 ~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 540 (594)
. .....||+.|+|||.+.+..+ +.++||||+|+++|||++|+.||...... ........ ..
T Consensus 167 ~--~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------~~~~~~~~-~~--------- 228 (275)
T 2eue_A 167 F--LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP------VLFKNISN-GV--------- 228 (275)
T ss_dssp ----------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHH-TC---------
T ss_pred c--ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHh-CC---------
Confidence 2 233468999999999987765 78999999999999999999999764221 11111111 10
Q ss_pred CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 541 EGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 541 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
...+...+..+.+++.+||+.||++|||++|+++
T Consensus 229 ~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 229 YTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred CCCCccCCHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 0112223467899999999999999999999975
No 145
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=3.3e-40 Score=343.52 Aligned_cols=249 Identities=18% Similarity=0.348 Sum_probs=196.4
Q ss_pred cCCCccceeeeecceEEEEEEecCCcEEEEEeeccc--chhhHHHHHHHHHHHhhCC--CCeeeeeeeEEeCCCceEEEE
Q 007668 307 ETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKL--NEGFDRFFERELEILGSIK--HRYLVNLRGYCNSPTSKLLIY 382 (594)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~--h~niv~l~g~~~~~~~~~lv~ 382 (594)
..|...+.||+|+||.||++...+++.||||++... .....+.+.+|++++.+++ ||||+++++++......++||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 458889999999999999999888999999998643 3444577999999999996 599999999999999999999
Q ss_pred EccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccCCc
Q 007668 383 DFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEES 462 (594)
Q Consensus 383 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~~ 462 (594)
| +.+++|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++ ++.+||+|||+++.......
T Consensus 136 E-~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~lH~---~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~ 209 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKK-KSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT 209 (390)
T ss_dssp E-CCSEEHHHHHHHC-SSCCHHHHHHHHHHHHHHHHHHHT---TTCCCCCCCGGGEEES-SSCEEECCCSSSCCC-----
T ss_pred e-cCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHEEEE-CCeEEEEecCccccccCCCc
Confidence 9 5688999999864 478999999999999999999994 5999999999999996 57999999999987654332
Q ss_pred e-eeeeeecccCccCcccccc-----------CCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhccc
Q 007668 463 H-ITTIVAGTFGYLAPEYMQS-----------GRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISED 530 (594)
Q Consensus 463 ~-~~~~~~gt~~y~aPE~~~~-----------~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 530 (594)
. ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... ...........
T Consensus 210 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~-----~~~~~~~~~~~ 284 (390)
T 2zmd_A 210 SVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ-----ISKLHAIIDPN 284 (390)
T ss_dssp ----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCH-----HHHHHHHHCTT
T ss_pred cccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHH-----HHHHHHHhCcc
Confidence 2 2344579999999999865 46899999999999999999999999653211 11111111111
Q ss_pred ccccccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 531 RQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 531 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
. ... .+......+.+++.+||+.||++|||+.|+++
T Consensus 285 ~-----~~~---~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 320 (390)
T 2zmd_A 285 H-----EIE---FPDIPEKDLQDVLKCCLKRDPKQRISIPELLA 320 (390)
T ss_dssp S-----CCC---CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred c-----cCC---CCccchHHHHHHHHHHcccChhhCCCHHHHhh
Confidence 1 001 11112357889999999999999999999985
No 146
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=1.8e-39 Score=329.43 Aligned_cols=251 Identities=26% Similarity=0.345 Sum_probs=204.0
Q ss_pred hcCCCccceeeeecceEEEEEEec-CCcEEEEEeecccchh------hHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCce
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNEG------FDRFFERELEILGSIKHRYLVNLRGYCNSPTSK 378 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~ 378 (594)
.++|...+.||+|+||.||+|... +|+.||+|.+...... ..+.+.+|++++.+++||||+++++++.+....
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 356888999999999999999865 6899999998753221 356799999999999999999999999999999
Q ss_pred EEEEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCC----cEEEeecccc
Q 007668 379 LLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNL----EARVSDFGLA 454 (594)
Q Consensus 379 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~----~~~l~Dfgl~ 454 (594)
++||||+++++|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++ .++|+|||++
T Consensus 91 ~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~aL~~lH~---~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~ 166 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQ-KESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (321)
T ss_dssp EEEECCCCSCBHHHHHHT-CSCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCTTSSSCCEEECCCTTC
T ss_pred EEEEEcCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCChHHEEEecCCCCcCCEEEccCccc
Confidence 999999999999999975 3568999999999999999999995 4999999999999999887 7999999999
Q ss_pred cccccCCceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhccccccc
Q 007668 455 KLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQRE 534 (594)
Q Consensus 455 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 (594)
........ .....||+.|+|||.+.+..++.++||||||+++|+|++|+.||....... ......... .
T Consensus 167 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~------~~~~i~~~~---~ 235 (321)
T 2a2a_A 167 HEIEDGVE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE------TLANITSVS---Y 235 (321)
T ss_dssp EECCTTCC--CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH------HHHHHHTTC---C
T ss_pred eecCcccc--ccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHH------HHHHHHhcc---c
Confidence 87654322 234568999999999999999999999999999999999999997643221 111111100 0
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 535 IIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 535 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
..++ ......+..+.+++.+||+.||++|||++|+++
T Consensus 236 ~~~~---~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 236 DFDE---EFFSHTSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp CCCH---HHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred ccCh---hhhcccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 0000 000123356899999999999999999999986
No 147
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=7.9e-41 Score=354.86 Aligned_cols=249 Identities=21% Similarity=0.330 Sum_probs=195.7
Q ss_pred hcCCCccceeeeecceEEEEEEec-CCcEEEEEeeccc---chhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEE
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKL---NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLI 381 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv 381 (594)
.++|+..+.||+|+||.||+|... +|+.||||++... .......+.+|++++..++||||+++++++.+....++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 467888999999999999999764 6899999999753 223345678899999999999999999999999999999
Q ss_pred EEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccCC
Q 007668 382 YDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEE 461 (594)
Q Consensus 382 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~ 461 (594)
|||+++|+|.+++... ..+++..+..++.||+.||+|||++ .+|+||||||+|||++.++.+||+|||+++......
T Consensus 227 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~--~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 303 (446)
T 4ejn_A 227 MEYANGGELFFHLSRE-RVFSEDRARFYGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG 303 (446)
T ss_dssp ECCCSSCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHH--TCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC--
T ss_pred EeeCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhc--CCEEECCCCHHHEEECCCCCEEEccCCCceeccCCC
Confidence 9999999999999764 5799999999999999999999951 499999999999999999999999999998644332
Q ss_pred ceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCCCCC
Q 007668 462 SHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCE 541 (594)
Q Consensus 462 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (594)
. ......||+.|+|||++.+..++.++||||||+++|||++|+.||...... .......... .
T Consensus 304 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~------~~~~~i~~~~-~--------- 366 (446)
T 4ejn_A 304 A-TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE------KLFELILMEE-I--------- 366 (446)
T ss_dssp ----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHCC-C---------
T ss_pred c-ccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH------HHHHHHHhCC-C---------
Confidence 2 234467999999999999999999999999999999999999999764322 1111111111 0
Q ss_pred CCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 007668 542 GVQSESLDALLAVATQCVSSSPDDRP-----TMHRVVQ 574 (594)
Q Consensus 542 ~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~ev~~ 574 (594)
..+...+..+.+++.+||+.||++|| +++|+++
T Consensus 367 ~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 367 RFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred CCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 01222346789999999999999999 9999985
No 148
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=9.9e-40 Score=337.42 Aligned_cols=251 Identities=17% Similarity=0.193 Sum_probs=203.9
Q ss_pred hcCCCccceeeeecceEEEEE------EecCCcEEEEEeecccchhhHHHHHHHHHHHhhCC---CCeeeeeeeEEeCCC
Q 007668 306 LETLDDDHIIGSGGFGTVYKL------AMDDGNVFALKRIDKLNEGFDRFFERELEILGSIK---HRYLVNLRGYCNSPT 376 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~------~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~g~~~~~~ 376 (594)
.++|...+.||+|+||.||+| ...+++.||+|++.... ...+.+|++++..++ |+||+++++++...+
T Consensus 64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~ 140 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQN 140 (365)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSS
T ss_pred CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhheeeecCC
Confidence 457888899999999999999 35568899999987643 346778888888886 999999999999999
Q ss_pred ceEEEEEccCCCchhhhhhh----cCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecC----------
Q 007668 377 SKLLIYDFLPGGSLDEALHE----RSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDG---------- 442 (594)
Q Consensus 377 ~~~lv~e~~~~gsL~~~l~~----~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~---------- 442 (594)
..++||||+++|+|.+++.. ....+++..+..++.||+.||+|||+ .+|+||||||+|||++.
T Consensus 141 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~---~~ivHrDiKp~NIll~~~~~~~~~~~~ 217 (365)
T 3e7e_A 141 GSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHD---CEIIHGDIKPDNFILGNGFLEQDDEDD 217 (365)
T ss_dssp CEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECGGGTCC-----
T ss_pred CcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhh---CCeecCCCCHHHEEecccccCcccccc
Confidence 99999999999999999974 34569999999999999999999994 59999999999999998
Q ss_pred -CCcEEEeeccccccccc-CCceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHH
Q 007668 443 -NLEARVSDFGLAKLLED-EESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIV 520 (594)
Q Consensus 443 -~~~~~l~Dfgl~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~ 520 (594)
++.+||+|||+++.... ..........||+.|+|||++.+..++.++||||||+++|||++|+.||.......
T Consensus 218 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~----- 292 (365)
T 3e7e_A 218 LSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE----- 292 (365)
T ss_dssp -CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE-----
T ss_pred ccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCc-----
Confidence 89999999999976542 22333455679999999999999999999999999999999999999985432210
Q ss_pred HHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHHcccCCCCCC-CCHHHHHHHHhcccCC
Q 007668 521 GWLNFLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDR-PTMHRVVQILESEVMT 582 (594)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R-Ps~~ev~~~L~~~~~~ 582 (594)
...... .... .....+.+++..|++.+|.+| |+++++.+.|++.+..
T Consensus 293 ---------~~~~~~----~~~~--~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~ 340 (365)
T 3e7e_A 293 ---------CKPEGL----FRRL--PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQ 340 (365)
T ss_dssp ---------EEECSC----CTTC--SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHH
T ss_pred ---------eeechh----cccc--CcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHH
Confidence 001111 1111 124567789999999999998 5788888888876543
No 149
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=5.4e-40 Score=328.22 Aligned_cols=261 Identities=26% Similarity=0.386 Sum_probs=200.0
Q ss_pred hcCCCccceeeeecceEEEEEEec--CCc--EEEEEeeccc---chhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCce
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMD--DGN--VFALKRIDKL---NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSK 378 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~--~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~ 378 (594)
.++|+..+.||+|+||.||+|.+. +++ .||+|.++.. .....+.+.+|++++.+++||||+++++++.+.. .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 357888899999999999999753 233 6899998753 2344577899999999999999999999997765 8
Q ss_pred EEEEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccc
Q 007668 379 LLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLE 458 (594)
Q Consensus 379 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~ 458 (594)
++|+||+++++|.+++......+++..+..++.|++.||.|||+. +++||||||+||+++.++.++|+|||++....
T Consensus 96 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 172 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALP 172 (291)
T ss_dssp EEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred eeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEcccccccccc
Confidence 899999999999999987667799999999999999999999954 99999999999999999999999999998765
Q ss_pred cCCcee--eeeeecccCccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHHHHhcccccccc
Q 007668 459 DEESHI--TTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLNFLISEDRQREI 535 (594)
Q Consensus 459 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 535 (594)
...... .....+|..|+|||.+.+..++.++||||||+++|||++ |+.||...... ........... .
T Consensus 173 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~------~~~~~~~~~~~-~-- 243 (291)
T 1u46_A 173 QNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS------QILHKIDKEGE-R-- 243 (291)
T ss_dssp C-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH------HHHHHHHTSCC-C--
T ss_pred ccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHH------HHHHHHHccCC-C--
Confidence 443322 223457889999999998889999999999999999999 99998764322 11111111110 0
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccCCCC
Q 007668 536 IDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVMTPC 584 (594)
Q Consensus 536 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~~~~~ 584 (594)
...+...+..+.+++.+||+.||++|||+.++++.|++......
T Consensus 244 -----~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 287 (291)
T 1u46_A 244 -----LPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTDM 287 (291)
T ss_dssp -----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC----
T ss_pred -----CCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCccch
Confidence 01122344679999999999999999999999999998765443
No 150
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=3.2e-40 Score=334.10 Aligned_cols=257 Identities=21% Similarity=0.296 Sum_probs=196.4
Q ss_pred cCCCc-cceeeeecceEEEEEEec-CCcEEEEEeecccchhhHHHHHHHHHHHhhC-CCCeeeeeeeEEeCCCceEEEEE
Q 007668 307 ETLDD-DHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNEGFDRFFERELEILGSI-KHRYLVNLRGYCNSPTSKLLIYD 383 (594)
Q Consensus 307 ~~~~~-~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e 383 (594)
+.|.. .+.||+|+||.||+|... +++.||||++..........+.+|++++.++ +||||+++++++.+....++|||
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 91 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE 91 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence 45665 478999999999999754 6899999999876555567899999999885 79999999999999999999999
Q ss_pred ccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCc---EEEeecccccccccC
Q 007668 384 FLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLE---ARVSDFGLAKLLEDE 460 (594)
Q Consensus 384 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~---~~l~Dfgl~~~~~~~ 460 (594)
|+++|+|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++. +||+|||++......
T Consensus 92 ~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~ 167 (316)
T 2ac3_A 92 KMRGGSILSHIHKR-RHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLN 167 (316)
T ss_dssp CCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-----
T ss_pred cCCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCccccccC
Confidence 99999999999764 5689999999999999999999964 9999999999999997766 999999998765422
Q ss_pred Cc------eeeeeeecccCccCcccccc-----CCCCccchhhhHHHHHHHHHhCCCCCCcchhcccc-h--------HH
Q 007668 461 ES------HITTIVAGTFGYLAPEYMQS-----GRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGL-N--------IV 520 (594)
Q Consensus 461 ~~------~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~-~--------~~ 520 (594)
.. .......||+.|+|||++.+ ..++.++||||||+++|||++|+.||......... . ..
T Consensus 168 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 247 (316)
T 2ac3_A 168 GDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQN 247 (316)
T ss_dssp --------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHH
T ss_pred CccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHH
Confidence 11 11223468999999999875 45789999999999999999999999764322100 0 00
Q ss_pred HHHHHHhcccccccccCCCCCC-CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 521 GWLNFLISEDRQREIIDPNCEG-VQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
....... .... ..+. .....+..+.+++.+||+.||++|||++|+++
T Consensus 248 ~~~~~i~-~~~~------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 248 MLFESIQ-EGKY------EFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp HHHHHHH-HCCC------CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHHHh-ccCc------ccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 0011111 0000 0000 00123467899999999999999999999986
No 151
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=1e-39 Score=329.13 Aligned_cols=261 Identities=25% Similarity=0.365 Sum_probs=197.7
Q ss_pred hcCCCccceeeeecceEEEEEEe-cCCcEEEEEeecccc-----hhhHHHHHHHHHHHhhC---CCCeeeeeeeEEeCCC
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAM-DDGNVFALKRIDKLN-----EGFDRFFERELEILGSI---KHRYLVNLRGYCNSPT 376 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l---~h~niv~l~g~~~~~~ 376 (594)
.++|+..+.||+|+||+||+|.. .+++.||+|++.... ......+.+|+++++++ +||||+++++++....
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~ 87 (308)
T 3g33_A 8 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSR 87 (308)
T ss_dssp --CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECC
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccC
Confidence 56899999999999999999986 568999999987422 12234567788777766 4999999999997655
Q ss_pred -----ceEEEEEccCCCchhhhhhhcC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEee
Q 007668 377 -----SKLLIYDFLPGGSLDEALHERS-EQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSD 450 (594)
Q Consensus 377 -----~~~lv~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~D 450 (594)
..++||||++ ++|.+++.... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 88 ~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~D 163 (308)
T 3g33_A 88 TDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLAD 163 (308)
T ss_dssp SSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEEECS
T ss_pred CCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEEee
Confidence 4789999996 69999998643 3499999999999999999999964 999999999999999999999999
Q ss_pred cccccccccCCceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhc--
Q 007668 451 FGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLIS-- 528 (594)
Q Consensus 451 fgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~-- 528 (594)
||+++....... .....||+.|+|||++.+..++.++||||||+++|||++|+.||......... .........
T Consensus 164 fg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~--~~i~~~~~~~~ 239 (308)
T 3g33_A 164 FGLARIYSYQMA--LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQL--GKIFDLIGLPP 239 (308)
T ss_dssp CSCTTTSTTCCC--SGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHH--HHHHHHHCCCC
T ss_pred CccccccCCCcc--cCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHH--HHHHHHhCCCC
Confidence 999986653322 23457899999999999999999999999999999999999999764332111 111110000
Q ss_pred cccc-------ccccCCCCC----CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 529 EDRQ-------REIIDPNCE----GVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 529 ~~~~-------~~~~~~~~~----~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
.... ...+.+... .........+.+++.+||+.||++|||++|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 240 EDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp TTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 0000 000000000 011233467899999999999999999999875
No 152
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=2.8e-40 Score=336.25 Aligned_cols=257 Identities=27% Similarity=0.422 Sum_probs=204.4
Q ss_pred hcCCCccceeeeecceEEEEEEec-CCcE--EEEEeeccc-chhhHHHHHHHHHHHhhC-CCCeeeeeeeEEeCCCceEE
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNV--FALKRIDKL-NEGFDRFFERELEILGSI-KHRYLVNLRGYCNSPTSKLL 380 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~--vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~l 380 (594)
.++|...+.||+|+||.||+|... ++.. +|+|.+... .....+.+.+|++++.++ +||||+++++++.+....++
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 103 (327)
T 1fvr_A 24 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 103 (327)
T ss_dssp GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEE
T ss_pred HHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEE
Confidence 467889999999999999999765 4554 499988753 233456789999999999 89999999999999999999
Q ss_pred EEEccCCCchhhhhhhcC---------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCc
Q 007668 381 IYDFLPGGSLDEALHERS---------------EQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLE 445 (594)
Q Consensus 381 v~e~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~ 445 (594)
||||+++|+|.+++.... ..+++..++.++.||+.||+|||+ .+|+||||||+||+++.++.
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~~~~ 180 (327)
T 1fvr_A 104 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYV 180 (327)
T ss_dssp EECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGGC
T ss_pred EEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCccceEEEcCCCe
Confidence 999999999999997543 469999999999999999999995 49999999999999999999
Q ss_pred EEEeecccccccccCCceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHH
Q 007668 446 ARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLN 524 (594)
Q Consensus 446 ~~l~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~ 524 (594)
+||+|||+++....... .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||...... ....
T Consensus 181 ~kL~Dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~------~~~~ 252 (327)
T 1fvr_A 181 AKIADFGLSRGQEVYVK--KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA------ELYE 252 (327)
T ss_dssp EEECCTTCEESSCEECC--C----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH------HHHH
T ss_pred EEEcccCcCcccccccc--ccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHH------HHHH
Confidence 99999999874332211 223456889999999998889999999999999999998 99999764321 1111
Q ss_pred HHhcccccccccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccCC
Q 007668 525 FLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVMT 582 (594)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~~~ 582 (594)
...... . ...+...+..+.+++.+||+.||++|||++|+++.|++.+..
T Consensus 253 ~~~~~~------~---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 301 (327)
T 1fvr_A 253 KLPQGY------R---LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 301 (327)
T ss_dssp HGGGTC------C---CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred HhhcCC------C---CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 111110 0 011223446799999999999999999999999999886554
No 153
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=7.8e-40 Score=326.03 Aligned_cols=261 Identities=25% Similarity=0.418 Sum_probs=211.1
Q ss_pred hcCCCccceeeeecceEEEEEEec-CCcEEEEEeecccc---hhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEE
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLN---EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLI 381 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv 381 (594)
.++|...+.||+|+||.||+|... ++..||+|.+.... ....+.+.+|++++++++||||+++++++.+....++|
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 467888999999999999999776 57789999986532 22356789999999999999999999999999999999
Q ss_pred EEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccCC
Q 007668 382 YDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEE 461 (594)
Q Consensus 382 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~ 461 (594)
|||+++|+|.+++... ..+++..+..++.|++.||.||| +.+++||||||+||+++.++.++|+|||++.......
T Consensus 93 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~ 168 (284)
T 2vgo_A 93 LEFAPRGELYKELQKH-GRFDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR 168 (284)
T ss_dssp ECCCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSSC
T ss_pred EEeCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEEcCCCCEEEecccccccCcccc
Confidence 9999999999999764 46899999999999999999999 4599999999999999999999999999987654322
Q ss_pred ceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCCCCC
Q 007668 462 SHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCE 541 (594)
Q Consensus 462 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (594)
.....|++.|+|||.+.+..++.++||||||+++|+|++|+.||....... ........ +..
T Consensus 169 ---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~------~~~~~~~~-------~~~-- 230 (284)
T 2vgo_A 169 ---RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE------THRRIVNV-------DLK-- 230 (284)
T ss_dssp ---BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHHHTT-------CCC--
T ss_pred ---cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhH------HHHHHhcc-------ccC--
Confidence 233568999999999999899999999999999999999999997642211 11111111 001
Q ss_pred CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHhcccCCCCCcccc
Q 007668 542 GVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ--ILESEVMTPCPSDFY 589 (594)
Q Consensus 542 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~--~L~~~~~~~~~~~~~ 589 (594)
.+...+..+.+++.+|++.||++|||++|+++ .++.......|..+.
T Consensus 231 -~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h~~~~~~~~~~~p~~~~ 279 (284)
T 2vgo_A 231 -FPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANSRRVLPPVYQ 279 (284)
T ss_dssp -CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTCHHHHHHCCCCCCCCC-
T ss_pred -CCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhCHHHHhhccccCCCccc
Confidence 11233467899999999999999999999986 565554444444433
No 154
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=3.7e-39 Score=321.02 Aligned_cols=251 Identities=24% Similarity=0.366 Sum_probs=204.0
Q ss_pred hcCCCccceeeeecceEEEEEEec-CCcEEEEEeeccc--chhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEEE
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKL--NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIY 382 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ 382 (594)
.++|+..+.||+|+||.||+|... +++.||+|++... .....+.+.+|++++++++||||+++++++.+....++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 357888999999999999999765 5889999998653 3334567889999999999999999999999999999999
Q ss_pred EccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCc---EEEeeccccccccc
Q 007668 383 DFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLE---ARVSDFGLAKLLED 459 (594)
Q Consensus 383 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~---~~l~Dfgl~~~~~~ 459 (594)
||+++++|.+.+... ..+++..+..++.|++.||.|||+ .+|+||||||+||+++.++. +||+|||++.....
T Consensus 85 e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 160 (284)
T 3kk8_A 85 DLVTGGELFEDIVAR-EFYSEADASHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 160 (284)
T ss_dssp CCCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS
T ss_pred ecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc
Confidence 999999999988764 568999999999999999999995 49999999999999986655 99999999987654
Q ss_pred CCceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCCC
Q 007668 460 EESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPN 539 (594)
Q Consensus 460 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (594)
... .....||+.|+|||.+.+..++.++||||+|+++|+|++|+.||....... ......... . ....+.
T Consensus 161 ~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~------~~~~~~~~~-~-~~~~~~ 230 (284)
T 3kk8_A 161 SEA--WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR------LYAQIKAGA-Y-DYPSPE 230 (284)
T ss_dssp SCB--CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHTC-C-CCCTTT
T ss_pred Ccc--ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhH------HHHHHHhcc-c-cCCchh
Confidence 332 234568999999999999999999999999999999999999996543221 111111110 0 011111
Q ss_pred CCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 540 CEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 540 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
....+..+.+++.+||+.||++|||++|+++
T Consensus 231 ----~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 231 ----WDTVTPEAKSLIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp ----TTTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ----hcccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 1233467899999999999999999999986
No 155
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=6.7e-40 Score=326.81 Aligned_cols=243 Identities=21% Similarity=0.367 Sum_probs=198.1
Q ss_pred hcCCCccceeeeecceEEEEEEec-CCcEEEEEeeccc--chhhHHHHHHHHHHHhhC-CCCeeeeeeeEEeCCCceEEE
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKL--NEGFDRFFERELEILGSI-KHRYLVNLRGYCNSPTSKLLI 381 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lv 381 (594)
.++|...+.||+|+||.||+|... +++.||+|++... .......+.+|+..+..+ +||||+++++++.+....++|
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv 89 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ 89 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 457888999999999999999876 7899999998753 233456788899999999 999999999999999999999
Q ss_pred EEccCCCchhhhhhhc---CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecC----------------
Q 007668 382 YDFLPGGSLDEALHER---SEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDG---------------- 442 (594)
Q Consensus 382 ~e~~~~gsL~~~l~~~---~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~---------------- 442 (594)
|||+++++|.+++... ...+++..+..++.||+.||+|||+ .+|+||||||+||+++.
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~ 166 (289)
T 1x8b_A 90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS---MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDW 166 (289)
T ss_dssp EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEC-----------------
T ss_pred EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHh---CCEeecCCCHHHEEEcCCCCCcccccccccccc
Confidence 9999999999999753 2568999999999999999999995 49999999999999984
Q ss_pred ---CCcEEEeecccccccccCCceeeeeeecccCccCccccccC-CCCccchhhhHHHHHHHHHhCCCCCCcchhcccch
Q 007668 443 ---NLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSG-RATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLN 518 (594)
Q Consensus 443 ---~~~~~l~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~ 518 (594)
...++|+|||.+........ ..||+.|+|||.+.+. .++.++||||||+++|||++|.+|+.....
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~~~-----~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~----- 236 (289)
T 1x8b_A 167 ASNKVMFKIGDLGHVTRISSPQV-----EEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ----- 236 (289)
T ss_dssp ---CCCEEECCCTTCEETTCSCC-----CCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHH-----
T ss_pred cCCceEEEEcccccccccCCccc-----cCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhH-----
Confidence 44799999999987654322 3489999999999765 567899999999999999999987643211
Q ss_pred HHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 519 IVGWLNFLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
+.. .... ..+..+...+..+.+++.+||+.||++|||+.|+++
T Consensus 237 ---~~~--~~~~--------~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 237 ---WHE--IRQG--------RLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp ---HHH--HHTT--------CCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ---HHH--HHcC--------CCCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 100 0111 111122234467899999999999999999999875
No 156
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=3.1e-40 Score=355.19 Aligned_cols=252 Identities=24% Similarity=0.365 Sum_probs=205.7
Q ss_pred hcCCCccceeeeecceEEEEEEec-CCcEEEEEeeccc---chhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEE
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKL---NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLI 381 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv 381 (594)
.++|...+.||+|+||.||+|... +|+.||+|++... .......+.+|++++.+++||||+++++++.+....++|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 356888899999999999999875 6899999999753 223356688999999999999999999999999999999
Q ss_pred EEccCCCchhhhhhhcC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccC
Q 007668 382 YDFLPGGSLDEALHERS-EQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDE 460 (594)
Q Consensus 382 ~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~ 460 (594)
|||+++|+|.+++.... ..+++..+..++.||+.||+|||++ +|+||||||+|||++.++++||+|||++......
T Consensus 263 mEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~ 339 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG 339 (576)
T ss_dssp ECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceecccC
Confidence 99999999999997643 3499999999999999999999964 9999999999999999999999999999876543
Q ss_pred CceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCCCC
Q 007668 461 ESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNC 540 (594)
Q Consensus 461 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 540 (594)
.. .....||+.|+|||++.+..++.++|||||||++|||++|+.||........ .......... .. .
T Consensus 340 ~~--~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~--~~~i~~~i~~-~~------~-- 406 (576)
T 2acx_A 340 QT--IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK--REEVERLVKE-VP------E-- 406 (576)
T ss_dssp CC--EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCC--HHHHHHHHHH-CC------C--
T ss_pred cc--ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchh--HHHHHHHhhc-cc------c--
Confidence 32 3345799999999999998999999999999999999999999976432211 1111111111 00 0
Q ss_pred CCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 007668 541 EGVQSESLDALLAVATQCVSSSPDDRP-----TMHRVVQ 574 (594)
Q Consensus 541 ~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~ev~~ 574 (594)
..+...+..+.+|+.+||+.||++|| +++|+++
T Consensus 407 -~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 407 -EYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp -CCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred -cCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 11223446789999999999999999 6788874
No 157
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=8.9e-40 Score=324.06 Aligned_cols=252 Identities=24% Similarity=0.365 Sum_probs=204.1
Q ss_pred hcCCCccceeeeecceEEEEEEec-CCcEEEEEeeccc-chhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEEEE
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKL-NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYD 383 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e 383 (594)
.++|+..+.||+|+||.||+|... +++.||+|.+... .....+.+.+|+++++.++||||+++++++.+....++|+|
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence 467888999999999999999876 6899999998743 23345778999999999999999999999999999999999
Q ss_pred ccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccCCc-
Q 007668 384 FLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEES- 462 (594)
Q Consensus 384 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~~- 462 (594)
|+++++|.+++.. ...+++..+..++.|++.||+|||+ .+++||||||+||+++.++.++|+|||++........
T Consensus 86 ~~~~~~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 161 (276)
T 2yex_A 86 YCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (276)
T ss_dssp CCTTEEGGGGSBT-TTBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred ecCCCcHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcch
Confidence 9999999999975 3568999999999999999999995 4999999999999999999999999999986643322
Q ss_pred eeeeeeecccCccCccccccCCC-CccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCCCCC
Q 007668 463 HITTIVAGTFGYLAPEYMQSGRA-TEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCE 541 (594)
Q Consensus 463 ~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (594)
.......|++.|+|||.+.+..+ +.++||||||+++|||++|+.||........ ....+.. ... . .
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~---~~~----~-----~ 228 (276)
T 2yex_A 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ-EYSDWKE---KKT----Y-----L 228 (276)
T ss_dssp CCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSH-HHHHHHT---TCT----T-----S
T ss_pred hcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHH-HHHHhhh---ccc----c-----c
Confidence 12234568999999999987665 7899999999999999999999976432110 1111110 000 0 0
Q ss_pred CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 542 GVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 542 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
......+..+.+++.+||+.||++|||++|+++
T Consensus 229 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 229 NPWKKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CchhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 011233467889999999999999999999875
No 158
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=5.7e-40 Score=361.36 Aligned_cols=248 Identities=25% Similarity=0.404 Sum_probs=198.5
Q ss_pred ceeeeecceEEEEEEec---CCcEEEEEeecccc--hhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEEEEccCC
Q 007668 313 HIIGSGGFGTVYKLAMD---DGNVFALKRIDKLN--EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDFLPG 387 (594)
Q Consensus 313 ~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~ 387 (594)
+.||+|+||.||+|.+. .++.||||+++... ....+.+.+|++++.+++||||+++++++.. ...++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 47999999999999653 46789999997532 3346789999999999999999999999965 458899999999
Q ss_pred CchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccCCce--ee
Q 007668 388 GSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESH--IT 465 (594)
Q Consensus 388 gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~~~--~~ 465 (594)
|+|.++++. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++........ ..
T Consensus 454 g~L~~~l~~-~~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 529 (635)
T 4fl3_A 454 GPLNKYLQQ-NRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 529 (635)
T ss_dssp EEHHHHHHH-CTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC--------
T ss_pred CCHHHHHhh-CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccc
Confidence 999999975 45799999999999999999999964 9999999999999999999999999999876544322 22
Q ss_pred eeeecccCccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHHHHhcccccccccCCCCCCCC
Q 007668 466 TIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQ 544 (594)
Q Consensus 466 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (594)
....+|+.|+|||++.+..++.++||||||+++|||++ |+.||......+ .......... ...+
T Consensus 530 ~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~------~~~~i~~~~~---------~~~p 594 (635)
T 4fl3_A 530 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE------VTAMLEKGER---------MGCP 594 (635)
T ss_dssp -----CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH------HHHHHHTTCC---------CCCC
T ss_pred cCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH------HHHHHHcCCC---------CCCC
Confidence 33456889999999999999999999999999999998 999997643221 1111111110 1112
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccc
Q 007668 545 SESLDALLAVATQCVSSSPDDRPTMHRVVQILESEV 580 (594)
Q Consensus 545 ~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~ 580 (594)
...+..+.+++.+||+.||++|||+++|++.|++..
T Consensus 595 ~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~ 630 (635)
T 4fl3_A 595 AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 630 (635)
T ss_dssp TTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence 234477999999999999999999999999998643
No 159
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=1.7e-40 Score=342.61 Aligned_cols=249 Identities=22% Similarity=0.304 Sum_probs=194.0
Q ss_pred hcCCCccceeeeecceEEEEEEec-CCcEEEEEeecccc---hhhHHHHHHHHHH-HhhCCCCeeeeeeeEEeCCCceEE
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLN---EGFDRFFERELEI-LGSIKHRYLVNLRGYCNSPTSKLL 380 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~-l~~l~h~niv~l~g~~~~~~~~~l 380 (594)
.++|...+.||+|+||.||++... +++.||+|++.+.. ......+.+|..+ ++.++||||+++++++.+....++
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 457888999999999999999876 57889999997533 2233456667766 577899999999999999999999
Q ss_pred EEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccC
Q 007668 381 IYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDE 460 (594)
Q Consensus 381 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~ 460 (594)
||||+++|+|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++++||+|||+++.....
T Consensus 117 v~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~ 192 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRE-RCFLEPRARFYAAEIASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH 192 (373)
T ss_dssp EEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCC
T ss_pred EEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEECCCCCEEEeeCccccccccC
Confidence 99999999999999763 568999999999999999999995 49999999999999999999999999999864332
Q ss_pred CceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCCCC
Q 007668 461 ESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNC 540 (594)
Q Consensus 461 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 540 (594)
. ......+||+.|+|||++.+..++.++||||||+++|||++|..||...... .......... . .
T Consensus 193 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~------~~~~~i~~~~-~--~----- 257 (373)
T 2r5t_A 193 N-STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA------EMYDNILNKP-L--Q----- 257 (373)
T ss_dssp C-CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHH------HHHHHHHHSC-C--C-----
T ss_pred C-CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH------HHHHHHHhcc-c--C-----
Confidence 2 2234567999999999999999999999999999999999999999764322 1111111111 0 0
Q ss_pred CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 007668 541 EGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQI 575 (594)
Q Consensus 541 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 575 (594)
.+...+..+.+++.+||+.||++||++.+.++.
T Consensus 258 --~~~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ 290 (373)
T 2r5t_A 258 --LKPNITNSARHLLEGLLQKDRTKRLGAKDDFME 290 (373)
T ss_dssp --CCSSSCHHHHHHHHHHTCSSGGGSTTTTTTHHH
T ss_pred --CCCCCCHHHHHHHHHHcccCHHhCCCCCCCHHH
Confidence 112234678999999999999999998644433
No 160
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.1e-40 Score=335.46 Aligned_cols=264 Identities=24% Similarity=0.336 Sum_probs=198.6
Q ss_pred HHhcCCCccceeeeecceEEEEEEec-CCcEEEEEeecccch-----hhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCc
Q 007668 304 KKLETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNE-----GFDRFFERELEILGSIKHRYLVNLRGYCNSPTS 377 (594)
Q Consensus 304 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~ 377 (594)
...++|...+.||+|+||.||+|... +|+.||||++..... ...+.+.+|++++.+++||||+++++++.+...
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN 86 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence 44678999999999999999999875 589999999874321 123467899999999999999999999999999
Q ss_pred eEEEEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeeccccccc
Q 007668 378 KLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLL 457 (594)
Q Consensus 378 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~ 457 (594)
.++||||+++ +|.+++......+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 87 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~ 162 (346)
T 1ua2_A 87 ISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKSF 162 (346)
T ss_dssp CEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGSTT
T ss_pred eEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecccceec
Confidence 9999999975 89999887667799999999999999999999954 9999999999999999999999999999876
Q ss_pred ccCCceeeeeeecccCccCccccccC-CCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcc--ccccc
Q 007668 458 EDEESHITTIVAGTFGYLAPEYMQSG-RATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISE--DRQRE 534 (594)
Q Consensus 458 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 534 (594)
..... ......||+.|+|||++.+. .++.++||||||+++|||++|..||........ +.......... .....
T Consensus 163 ~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~ 239 (346)
T 1ua2_A 163 GSPNR-AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQ--LTRIFETLGTPTEEQWPD 239 (346)
T ss_dssp TSCCC-CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHHHCCCCTTTSSS
T ss_pred cCCcc-cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHH--HHHHHHHcCCCChhhhhh
Confidence 54332 23345689999999998754 589999999999999999999999876432211 11111100000 00000
Q ss_pred -------ccCCCCCCCC-----HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 535 -------IIDPNCEGVQ-----SESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 535 -------~~~~~~~~~~-----~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
......+..+ ...+..+.+++.+||+.||++|||++|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 291 (346)
T 1ua2_A 240 MCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK 291 (346)
T ss_dssp TTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred hccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhc
Confidence 0000001111 233467999999999999999999999986
No 161
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=1.6e-40 Score=330.07 Aligned_cols=257 Identities=24% Similarity=0.392 Sum_probs=202.7
Q ss_pred hcCCCccceeeeecceEEEEEEec-CCcEEEEEeeccc--chhhHHHHHHHHHHHhhCCCCeeeeeeeEEe--CCCceEE
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKL--NEGFDRFFERELEILGSIKHRYLVNLRGYCN--SPTSKLL 380 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~--~~~~~~l 380 (594)
.++|+..+.||+|+||.||++... +++.||+|.+... .....+.+.+|++++++++||||+++++++. .....++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 467888999999999999999775 6899999999753 3344567899999999999999999999874 4667899
Q ss_pred EEEccCCCchhhhhhhc---CCCCCHHHHHHHHHHHHHHHHHhhhcC--CCCeeeCCCCCCCeEecCCCcEEEeeccccc
Q 007668 381 IYDFLPGGSLDEALHER---SEQLDWDARLNIIMGAAKGLAYLHHDC--SPRIIHRDIKSSNILLDGNLEARVSDFGLAK 455 (594)
Q Consensus 381 v~e~~~~gsL~~~l~~~---~~~l~~~~~~~i~~~ia~~L~~LH~~~--~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~ 455 (594)
||||+++++|.+++... ...+++..+..++.|++.||+|||+.. ..+|+||||||+||+++.++.+||+|||++.
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~ 164 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 164 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHH
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchhe
Confidence 99999999999999753 344999999999999999999999751 0129999999999999999999999999998
Q ss_pred ccccCCceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccc
Q 007668 456 LLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREI 535 (594)
Q Consensus 456 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 535 (594)
........ .....|++.|+|||.+.+..++.++||||||+++|+|++|+.||....... ..... .....
T Consensus 165 ~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~------~~~~i-~~~~~--- 233 (279)
T 2w5a_A 165 ILNHDTSF-AKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE------LAGKI-REGKF--- 233 (279)
T ss_dssp HC---CHH-HHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHH-HHTCC---
T ss_pred eecccccc-ccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHH------HHHHH-hhccc---
Confidence 76543221 223468999999999999899999999999999999999999987643211 11111 11111
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 007668 536 IDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILES 578 (594)
Q Consensus 536 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~ 578 (594)
...+...+..+.+++.+||+.||++|||++|+++.+..
T Consensus 234 -----~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~ 271 (279)
T 2w5a_A 234 -----RRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI 271 (279)
T ss_dssp -----CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred -----ccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhh
Confidence 11122344679999999999999999999999986643
No 162
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=4.4e-40 Score=334.82 Aligned_cols=257 Identities=26% Similarity=0.389 Sum_probs=203.6
Q ss_pred hcCCCccceeeeecceEEEEEEe------cCCcEEEEEeeccc-chhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCce
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAM------DDGNVFALKRIDKL-NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSK 378 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~ 378 (594)
.++|...+.||+|+||.||+|.. .++..||||++... .......+.+|+.++++++||||+++++++.+....
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 108 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence 46788999999999999999974 35778999999753 344456789999999999999999999999999999
Q ss_pred EEEEEccCCCchhhhhhhcC------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecC---CCcEEEe
Q 007668 379 LLIYDFLPGGSLDEALHERS------EQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDG---NLEARVS 449 (594)
Q Consensus 379 ~lv~e~~~~gsL~~~l~~~~------~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~---~~~~~l~ 449 (594)
++||||+++++|.+++.... ..+++..++.++.||+.||.|||+ .+|+||||||+||+++. +..++|+
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~---~~i~H~dlkp~NIli~~~~~~~~~kl~ 185 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIG 185 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhh---CCeecCcCCHhHEEEecCCCcceEEEC
Confidence 99999999999999998643 348999999999999999999995 49999999999999984 4569999
Q ss_pred ecccccccccCCc-eeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHHHHh
Q 007668 450 DFGLAKLLEDEES-HITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLNFLI 527 (594)
Q Consensus 450 Dfgl~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 527 (594)
|||++........ .......|++.|+|||.+.+..++.++||||||+++|||++ |..||...... .......
T Consensus 186 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~------~~~~~~~ 259 (327)
T 2yfx_A 186 DFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ------EVLEFVT 259 (327)
T ss_dssp CCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH------HHHHHHH
T ss_pred ccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH------HHHHHHh
Confidence 9999976543322 12233467899999999999999999999999999999998 99998653221 1111111
Q ss_pred cccccccccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccc
Q 007668 528 SEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEV 580 (594)
Q Consensus 528 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~ 580 (594)
.... ...+...+..+.+++.+||+.||++|||+.++++.|+...
T Consensus 260 ~~~~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~ 303 (327)
T 2yfx_A 260 SGGR---------MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT 303 (327)
T ss_dssp TTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cCCC---------CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHh
Confidence 1110 1112233467899999999999999999999999998753
No 163
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.6e-41 Score=341.38 Aligned_cols=264 Identities=25% Similarity=0.388 Sum_probs=188.9
Q ss_pred cCCCccceeeeecceEEEEEEecCCcEEEEEeecccchhhHHHHHHHHHHHhh--CCCCeeeeeeeEEeCCC----ceEE
Q 007668 307 ETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGS--IKHRYLVNLRGYCNSPT----SKLL 380 (594)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~g~~~~~~----~~~l 380 (594)
++|...+.||+|+||.||+|... ++.||||++.... ...+.+|.+++.. ++||||+++++++.... ..++
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l 78 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL 78 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-TT---HHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEE
T ss_pred ceeeehhhccCCCCeEEEEEEEc-CcceEEEEecccc---hhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEE
Confidence 57889999999999999999875 8899999986532 3567778888877 79999999999997766 6799
Q ss_pred EEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcC-----CCCeeeCCCCCCCeEecCCCcEEEeeccccc
Q 007668 381 IYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDC-----SPRIIHRDIKSSNILLDGNLEARVSDFGLAK 455 (594)
Q Consensus 381 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~-----~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~ 455 (594)
||||+++|+|.+++.. ..+++..+..++.|++.||+|||... +.+|+||||||+||+++.++.+||+|||++.
T Consensus 79 v~e~~~~g~L~~~l~~--~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~DFg~a~ 156 (303)
T 3gxj_A 79 VSDYHEHGSLFDYLNR--YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 156 (303)
T ss_dssp EEECCTTCCHHHHHHH--CCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCCCCC-C
T ss_pred EEeccCCCCHHHHHhc--cCcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEeecCcce
Confidence 9999999999999965 35788889999999999999999311 3499999999999999999999999999997
Q ss_pred ccccCCcee---eeeeecccCccCccccccC------CCCccchhhhHHHHHHHHHhC----------CCCCCcchhccc
Q 007668 456 LLEDEESHI---TTIVAGTFGYLAPEYMQSG------RATEKTDVYSFGVLVLEVLSG----------KRPTDASFIEKG 516 (594)
Q Consensus 456 ~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~s~G~vl~elltg----------~~p~~~~~~~~~ 516 (594)
......... .....||+.|+|||++.+. .++.++||||||+++|||++| ..||........
T Consensus 157 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~~~ 236 (303)
T 3gxj_A 157 RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP 236 (303)
T ss_dssp CEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-CC
T ss_pred eccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCCCCc
Confidence 665443322 2334699999999998766 344689999999999999999 555543211110
Q ss_pred chHHHHHHHHhcccccccccCCCCCC--CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccCC
Q 007668 517 LNIVGWLNFLISEDRQREIIDPNCEG--VQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVMT 582 (594)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~~~ 582 (594)
......... ... ...+..+. ........+.+++.+||+.||++|||++||++.|++....
T Consensus 237 -~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~ 298 (303)
T 3gxj_A 237 -SVEEMRKVV-CEQ----KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp -CCC-CHHHH-TTS----CCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC
T ss_pred -cHHHHHHHH-HHh----hcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhh
Confidence 000001111 111 11111111 1235667899999999999999999999999999987654
No 164
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=5.4e-40 Score=338.79 Aligned_cols=261 Identities=21% Similarity=0.274 Sum_probs=201.3
Q ss_pred HhcCCCccceeeeecceEEEEEEe-cCCcEEEEEeecccchhhHHHHHHHHHHHhhCC-----CCeeeeeeeEEeCCCce
Q 007668 305 KLETLDDDHIIGSGGFGTVYKLAM-DDGNVFALKRIDKLNEGFDRFFERELEILGSIK-----HRYLVNLRGYCNSPTSK 378 (594)
Q Consensus 305 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h~niv~l~g~~~~~~~~ 378 (594)
..++|...+.||+|+||.||+|.. .+++.||||++... ....+.+..|++++..++ ||||+++++++......
T Consensus 33 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~ 111 (360)
T 3llt_A 33 LNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHM 111 (360)
T ss_dssp ETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEE
T ss_pred ecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCee
Confidence 356888999999999999999977 46889999998753 234566788999999986 99999999999999999
Q ss_pred EEEEEccCCCchhhhhhhcC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecC---------------
Q 007668 379 LLIYDFLPGGSLDEALHERS-EQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDG--------------- 442 (594)
Q Consensus 379 ~lv~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~--------------- 442 (594)
++||||+ +++|.+++.... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.
T Consensus 112 ~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~ 187 (360)
T 3llt_A 112 CLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRK---MSLTHTDLKPENILLDDPYFEKSLITVRRVTD 187 (360)
T ss_dssp EEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCTTCCEEEEEEECTTT
T ss_pred EEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCcccEEEccccccccccchhcccc
Confidence 9999999 999999998643 459999999999999999999995 49999999999999975
Q ss_pred ----------CCcEEEeecccccccccCCceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcch
Q 007668 443 ----------NLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASF 512 (594)
Q Consensus 443 ----------~~~~~l~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~ 512 (594)
++.+||+|||++....... ....||+.|+|||++.+..++.++||||||+++|||++|+.||....
T Consensus 188 ~~~~~~~~~~~~~~kl~DFG~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~ 263 (360)
T 3llt_A 188 GKKIQIYRTKSTGIKLIDFGCATFKSDYH----GSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHE 263 (360)
T ss_dssp CCEEEEEEESCCCEEECCCTTCEETTSCC----CSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred cccccccccCCCCEEEEeccCceecCCCC----cCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCc
Confidence 7899999999998654322 34568999999999999999999999999999999999999997643
Q ss_pred hcccchHHHH---------HHHHhcccccccc----cCCCCCC--CC---------------HHHHHHHHHHHHHcccCC
Q 007668 513 IEKGLNIVGW---------LNFLISEDRQREI----IDPNCEG--VQ---------------SESLDALLAVATQCVSSS 562 (594)
Q Consensus 513 ~~~~~~~~~~---------~~~~~~~~~~~~~----~~~~~~~--~~---------------~~~~~~l~~l~~~cl~~d 562 (594)
..+....... ............. ....++. .. ......+.+|+.+||+.|
T Consensus 264 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d 343 (360)
T 3llt_A 264 HMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQID 343 (360)
T ss_dssp HHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSS
T ss_pred HHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCC
Confidence 2211111100 0000000000000 0000000 00 011256789999999999
Q ss_pred CCCCCCHHHHHH
Q 007668 563 PDDRPTMHRVVQ 574 (594)
Q Consensus 563 P~~RPs~~ev~~ 574 (594)
|++|||++|+++
T Consensus 344 P~~Rpta~elL~ 355 (360)
T 3llt_A 344 PTLRPSPAELLK 355 (360)
T ss_dssp GGGSCCHHHHTT
T ss_pred hhhCCCHHHHhc
Confidence 999999999874
No 165
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.2e-40 Score=336.56 Aligned_cols=241 Identities=22% Similarity=0.293 Sum_probs=201.1
Q ss_pred hcCCCccceeeeecceEEEEEEe-cCCcEEEEEeecccch--------hhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCC
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAM-DDGNVFALKRIDKLNE--------GFDRFFERELEILGSIKHRYLVNLRGYCNSPT 376 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~ 376 (594)
.++|...+.||+|+||.||+|.. .+++.||||++..... ...+.+.+|++++++++||||+++++++.+..
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~ 102 (335)
T 3dls_A 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG 102 (335)
T ss_dssp HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC
Confidence 46788999999999999999975 4688999999875321 12345778999999999999999999999999
Q ss_pred ceEEEEEccCCC-chhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeeccccc
Q 007668 377 SKLLIYDFLPGG-SLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAK 455 (594)
Q Consensus 377 ~~~lv~e~~~~g-sL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~ 455 (594)
..++||||+.+| +|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 103 ~~~lv~e~~~~g~~l~~~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~ 178 (335)
T 3dls_A 103 FFQLVMEKHGSGLDLFAFIDR-HPRLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFGSAA 178 (335)
T ss_dssp EEEEEEECCTTSCBHHHHHHT-CCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEEEEEEeCCCCccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeecccce
Confidence 999999999777 99999875 35699999999999999999999954 99999999999999999999999999998
Q ss_pred ccccCCceeeeeeecccCccCccccccCCC-CccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhccccccc
Q 007668 456 LLEDEESHITTIVAGTFGYLAPEYMQSGRA-TEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQRE 534 (594)
Q Consensus 456 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 (594)
....... .....||+.|+|||++.+..+ +.++||||||+++|||++|+.||...... ...
T Consensus 179 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-----------------~~~ 239 (335)
T 3dls_A 179 YLERGKL--FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET-----------------VEA 239 (335)
T ss_dssp ECCTTCC--BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG-----------------TTT
T ss_pred ECCCCCc--eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH-----------------Hhh
Confidence 7654432 234569999999999988776 88999999999999999999999653211 000
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 535 IIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 535 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
... .+...+..+.+++.+||+.||++|||++|+++
T Consensus 240 ~~~-----~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~ 274 (335)
T 3dls_A 240 AIH-----PPYLVSKELMSLVSGLLQPVPERRTTLEKLVT 274 (335)
T ss_dssp CCC-----CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ccC-----CCcccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000 11123467899999999999999999999987
No 166
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=7.6e-40 Score=347.96 Aligned_cols=260 Identities=20% Similarity=0.276 Sum_probs=193.6
Q ss_pred hcCCCccceeeeecceEEEEEEec-CCcEEEEEeeccc--chhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCC------C
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKL--NEGFDRFFERELEILGSIKHRYLVNLRGYCNSP------T 376 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~------~ 376 (594)
.++|...+.||+|+||+||+|... +++.||||++... .....+.+.+|+.+++.++||||+++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 467888999999999999999755 6889999999753 344456788999999999999999999999654 3
Q ss_pred ceEEEEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccc
Q 007668 377 SKLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKL 456 (594)
Q Consensus 377 ~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~ 456 (594)
..++||||+++ +|.+.+. ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 141 ~~~lv~E~~~~-~l~~~~~---~~l~~~~~~~~~~qil~aL~~lH~---~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~ 213 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQ---MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART 213 (464)
T ss_dssp EEEEEEECCSE-EHHHHHT---SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCCCC--
T ss_pred eEEEEEeCCCC-CHHHHHh---hcCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChHhEEEeCCCCEEEEEEEeeee
Confidence 56999999965 5666664 348999999999999999999995 4999999999999999999999999999987
Q ss_pred cccCCceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHH-H--------H-----
Q 007668 457 LEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIV-G--------W----- 522 (594)
Q Consensus 457 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~-~--------~----- 522 (594)
..... ......||+.|+|||++.+..++.++||||+||++|||++|+.||.+....+....+ . +
T Consensus 214 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~ 291 (464)
T 3ttj_A 214 AGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 291 (464)
T ss_dssp ---CC--CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSC
T ss_pred cCCCc--ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcc
Confidence 65432 234467999999999999999999999999999999999999999764322111000 0 0
Q ss_pred --HHHHhcccc------cccccCCCC----CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 523 --LNFLISEDR------QREIIDPNC----EGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 523 --~~~~~~~~~------~~~~~~~~~----~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
......... ....+.... ..........+.+|+.+||+.||++|||++|+++
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 355 (464)
T 3ttj_A 292 PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 355 (464)
T ss_dssp HHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred hhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000000000 000000000 0011122567899999999999999999999986
No 167
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=9.5e-40 Score=328.34 Aligned_cols=252 Identities=25% Similarity=0.341 Sum_probs=200.5
Q ss_pred hcCCCccceeeeecceEEEEEEec-CCcEEEEEeecccchhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEEEEc
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDF 384 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~ 384 (594)
.++|+..+.||+|+||.||+|... ++..||+|.+........+.+.+|++++.+++||||+++++++......++||||
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 97 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEF 97 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEEC
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEe
Confidence 467888999999999999999876 5889999999876655667899999999999999999999999999999999999
Q ss_pred cCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccCCcee
Q 007668 385 LPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHI 464 (594)
Q Consensus 385 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~~~~ 464 (594)
+++++|.+++......+++..+..++.||+.||.|||+ .+++||||||+||+++.++.++|+|||++....... ..
T Consensus 98 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~ 173 (302)
T 2j7t_A 98 CPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHS---KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTL-QK 173 (302)
T ss_dssp CTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHH-HC
T ss_pred CCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHHHEEECCCCCEEEEECCCCccccccc-cc
Confidence 99999999998767779999999999999999999995 499999999999999999999999999876432211 11
Q ss_pred eeeeecccCccCcccc-----ccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCCC
Q 007668 465 TTIVAGTFGYLAPEYM-----QSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPN 539 (594)
Q Consensus 465 ~~~~~gt~~y~aPE~~-----~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (594)
.....||+.|+|||++ .+..++.++||||||+++|+|++|..||....... ........... .
T Consensus 174 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~------~~~~~~~~~~~-~----- 241 (302)
T 2j7t_A 174 RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR------VLLKIAKSDPP-T----- 241 (302)
T ss_dssp -----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHH------HHHHHHHSCCC-C-----
T ss_pred cccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHH------HHHHHhccCCc-c-----
Confidence 2334689999999998 36678999999999999999999999987643211 11111111100 0
Q ss_pred CCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 540 CEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 540 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
...+...+..+.+++.+||+.||++|||++++++
T Consensus 242 -~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 242 -LLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp -CSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred -cCCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 0112334467899999999999999999999875
No 168
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=326.48 Aligned_cols=251 Identities=24% Similarity=0.402 Sum_probs=198.5
Q ss_pred cCCCccceeeeecceEEEEEEe-cCCcEEEEEeecccchhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEEEEcc
Q 007668 307 ETLDDDHIIGSGGFGTVYKLAM-DDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDFL 385 (594)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~ 385 (594)
+.+....+||+|+||.||+|.. .++..||+|.+........+.+.+|+.+++.++||||+++++++.+....++||||+
T Consensus 22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 101 (295)
T 2clq_A 22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQV 101 (295)
T ss_dssp CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeC
Confidence 3455566999999999999976 468899999998766666678999999999999999999999999999999999999
Q ss_pred CCCchhhhhhhcC--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecC-CCcEEEeecccccccccCCc
Q 007668 386 PGGSLDEALHERS--EQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDG-NLEARVSDFGLAKLLEDEES 462 (594)
Q Consensus 386 ~~gsL~~~l~~~~--~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~-~~~~~l~Dfgl~~~~~~~~~ 462 (594)
++++|.+++.... ..+++..+..++.||+.||+|||+ .+|+||||||+||+++. ++.++|+|||++........
T Consensus 102 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~ 178 (295)
T 2clq_A 102 PGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHD---NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP 178 (295)
T ss_dssp SEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC---
T ss_pred CCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHh---CCEEccCCChhhEEEECCCCCEEEeecccccccCCCCC
Confidence 9999999998643 346789999999999999999995 49999999999999987 89999999999987654322
Q ss_pred eeeeeeecccCccCccccccCC--CCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCCCC
Q 007668 463 HITTIVAGTFGYLAPEYMQSGR--ATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNC 540 (594)
Q Consensus 463 ~~~~~~~gt~~y~aPE~~~~~~--~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 540 (594)
......|++.|+|||++.+.. ++.++||||||+++|||++|+.||....... ........ .. ..+
T Consensus 179 -~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----~~~~~~~~--~~----~~~-- 245 (295)
T 2clq_A 179 -CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQ----AAMFKVGM--FK----VHP-- 245 (295)
T ss_dssp ---CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHH----HHHHHHHH--HC----CCC--
T ss_pred -cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchh----HHHHhhcc--cc----ccc--
Confidence 123456899999999987643 8899999999999999999999986532111 00000000 00 111
Q ss_pred CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 541 EGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 541 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
..+...+..+.+++.+||+.||++|||++|+++
T Consensus 246 -~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 246 -EIPESMSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp -CCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred -cccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 122234467899999999999999999999875
No 169
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=9.8e-40 Score=340.27 Aligned_cols=261 Identities=25% Similarity=0.375 Sum_probs=190.2
Q ss_pred HhcCCCccceeeeecceEEEEEEe-cCCcEEEEEeeccc--chhhHHHHHHHHHHHhhCC-CCeeeeeeeEEeCCC--ce
Q 007668 305 KLETLDDDHIIGSGGFGTVYKLAM-DDGNVFALKRIDKL--NEGFDRFFERELEILGSIK-HRYLVNLRGYCNSPT--SK 378 (594)
Q Consensus 305 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~--~~ 378 (594)
..++|...+.||+|+||.||+|.. .+|+.||||++... .......+.+|+.++.++. ||||+++++++...+ ..
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~ 86 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV 86 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence 357889999999999999999975 46899999998643 3344567889999999997 999999999996544 67
Q ss_pred EEEEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccc
Q 007668 379 LLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLE 458 (594)
Q Consensus 379 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~ 458 (594)
++||||++ ++|.+++.. ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 87 ~lv~e~~~-~~L~~~~~~--~~~~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 160 (388)
T 3oz6_A 87 YLVFDYME-TDLHAVIRA--NILEPVHKQYVVYQLIKVIKYLHS---GGLLHRDMKPSNILLNAECHVKVADFGLSRSFV 160 (388)
T ss_dssp EEEEECCS-EEHHHHHHH--TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEESS
T ss_pred EEEecccC-cCHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHeEEcCCCCEEecCCccccccc
Confidence 99999997 689999875 468999999999999999999995 499999999999999999999999999998653
Q ss_pred cC--------------------CceeeeeeecccCccCcccccc-CCCCccchhhhHHHHHHHHHhCCCCCCcchhcccc
Q 007668 459 DE--------------------ESHITTIVAGTFGYLAPEYMQS-GRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGL 517 (594)
Q Consensus 459 ~~--------------------~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~ 517 (594)
.. .........||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.......
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~ 240 (388)
T 3oz6_A 161 NIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQL 240 (388)
T ss_dssp SCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred ccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 21 1112234579999999999876 67899999999999999999999999764322111
Q ss_pred hHHHHHHHHhccccc---------------------ccccCCCCCCC-------------CHHHHHHHHHHHHHcccCCC
Q 007668 518 NIVGWLNFLISEDRQ---------------------REIIDPNCEGV-------------QSESLDALLAVATQCVSSSP 563 (594)
Q Consensus 518 ~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~-------------~~~~~~~l~~l~~~cl~~dP 563 (594)
... . ........ ........... ....+..+.+|+.+||+.||
T Consensus 241 ~~i--~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP 317 (388)
T 3oz6_A 241 ERI--I-GVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNP 317 (388)
T ss_dssp HHH--H-HHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSG
T ss_pred HHH--H-HhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCc
Confidence 100 0 00000000 00000000000 00224578999999999999
Q ss_pred CCCCCHHHHHH
Q 007668 564 DDRPTMHRVVQ 574 (594)
Q Consensus 564 ~~RPs~~ev~~ 574 (594)
++|||++|+++
T Consensus 318 ~~R~t~~e~l~ 328 (388)
T 3oz6_A 318 NKRISANDALK 328 (388)
T ss_dssp GGSCCHHHHTT
T ss_pred ccCCCHHHHhC
Confidence 99999999876
No 170
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-40 Score=342.36 Aligned_cols=253 Identities=25% Similarity=0.384 Sum_probs=203.6
Q ss_pred hcCCCccceeeeecceEEEEEEe----cCCcEEEEEeecccc----hhhHHHHHHHHHHHhhC-CCCeeeeeeeEEeCCC
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAM----DDGNVFALKRIDKLN----EGFDRFFERELEILGSI-KHRYLVNLRGYCNSPT 376 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~ 376 (594)
.++|...+.||+|+||.||++.. .+++.||||+++... ....+.+.+|++++.++ +||||+++++++....
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 46788999999999999999987 478999999987532 22345677899999999 6999999999999999
Q ss_pred ceEEEEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccc
Q 007668 377 SKLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKL 456 (594)
Q Consensus 377 ~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~ 456 (594)
..++||||+++|+|.+++... ..+++..+..++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~ 208 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQR-ERFTEHEVQIYVGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKE 208 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEESCSSEEEE
T ss_pred eEEEEeecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCcEEEeeCCCCee
Confidence 999999999999999999764 469999999999999999999995 4999999999999999999999999999987
Q ss_pred cccCCceeeeeeecccCccCcccccc--CCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhccccccc
Q 007668 457 LEDEESHITTIVAGTFGYLAPEYMQS--GRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQRE 534 (594)
Q Consensus 457 ~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 (594)
.............||+.|+|||++.+ ..++.++||||||+++|||++|+.||........ ............
T Consensus 209 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~--~~~~~~~~~~~~---- 282 (355)
T 1vzo_A 209 FVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS--QAEISRRILKSE---- 282 (355)
T ss_dssp CCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC--HHHHHHHHHHCC----
T ss_pred cccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccch--HHHHHHHHhccC----
Confidence 65444333445679999999999985 3478999999999999999999999975432211 111111111110
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 007668 535 IIDPNCEGVQSESLDALLAVATQCVSSSPDDRP-----TMHRVVQ 574 (594)
Q Consensus 535 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~ev~~ 574 (594)
...+...+..+.+++.+||+.||++|| +++|+++
T Consensus 283 ------~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~ 321 (355)
T 1vzo_A 283 ------PPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKE 321 (355)
T ss_dssp ------CCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred ------CCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHc
Confidence 112223446788999999999999999 8999876
No 171
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=9.6e-40 Score=337.17 Aligned_cols=270 Identities=20% Similarity=0.272 Sum_probs=199.8
Q ss_pred HHHHHHHhcCCCccceeeeecceEEEEEEecCCcEEEEEeecccch-----------hhHHHHHHHHHHHhhCCCCeeee
Q 007668 299 SKDIIKKLETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNE-----------GFDRFFERELEILGSIKHRYLVN 367 (594)
Q Consensus 299 ~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-----------~~~~~~~~E~~~l~~l~h~niv~ 367 (594)
..++....++|...+.||+|+||.||+|...+|..||||++..... ...+.+.+|++++++++||||++
T Consensus 14 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~ 93 (362)
T 3pg1_A 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILG 93 (362)
T ss_dssp HHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred HHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccc
Confidence 3566667789999999999999999999988899999999864221 12367899999999999999999
Q ss_pred eeeEEeC-----CCceEEEEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecC
Q 007668 368 LRGYCNS-----PTSKLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDG 442 (594)
Q Consensus 368 l~g~~~~-----~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~ 442 (594)
+++++.. ....++||||++ |+|.+.+......+++..+..++.||+.||+|||+. +|+||||||+||+++.
T Consensus 94 ~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~ 169 (362)
T 3pg1_A 94 LRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNILLAD 169 (362)
T ss_dssp CSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECT
T ss_pred eeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHEEEcC
Confidence 9999833 345799999997 789998887667899999999999999999999964 9999999999999999
Q ss_pred CCcEEEeecccccccccCCceeeeeeecccCccCcccccc-CCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchH-H
Q 007668 443 NLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQS-GRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNI-V 520 (594)
Q Consensus 443 ~~~~~l~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~-~ 520 (594)
++.+||+|||++....... ......||+.|+|||++.+ ..++.++||||+|+++|+|++|+.||........... .
T Consensus 170 ~~~~kl~Dfg~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~ 247 (362)
T 3pg1_A 170 NNDITICDFNLAREDTADA--NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIV 247 (362)
T ss_dssp TCCEEECCTTC-----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred CCCEEEEecCccccccccc--ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 9999999999997544332 2234568999999999876 6789999999999999999999999976432211000 0
Q ss_pred HHHH-------HHhcccccccccCCCC--------CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 521 GWLN-------FLISEDRQREIIDPNC--------EGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 521 ~~~~-------~~~~~~~~~~~~~~~~--------~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
.... ...........+.... ..........+.+++.+||+.||++|||++|+++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 316 (362)
T 3pg1_A 248 EVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR 316 (362)
T ss_dssp HHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence 0000 0000000000000000 0111223467899999999999999999999986
No 172
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=3.5e-40 Score=342.23 Aligned_cols=240 Identities=17% Similarity=0.207 Sum_probs=188.7
Q ss_pred hcCCCccceeeeecceEEEEEEe-cCCcEEEEEeecc---cchhhHHHHHHHH---HHHhhCCCCeeeeee-------eE
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAM-DDGNVFALKRIDK---LNEGFDRFFEREL---EILGSIKHRYLVNLR-------GY 371 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~---~~~~~~~~~~~E~---~~l~~l~h~niv~l~-------g~ 371 (594)
.++|...+.||+|+||.||+|.. .+|+.||||++.. ......+.+.+|+ +.+++++||||++++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 35678889999999999999986 5689999999974 2334467889999 455566899999998 66
Q ss_pred EeCCC-----------------ceEEEEEccCCCchhhhhhhcCC------CCCHHHHHHHHHHHHHHHHHhhhcCCCCe
Q 007668 372 CNSPT-----------------SKLLIYDFLPGGSLDEALHERSE------QLDWDARLNIIMGAAKGLAYLHHDCSPRI 428 (594)
Q Consensus 372 ~~~~~-----------------~~~lv~e~~~~gsL~~~l~~~~~------~l~~~~~~~i~~~ia~~L~~LH~~~~~~i 428 (594)
+.+++ ..++||||+ +|+|.+++..... .+++..+..|+.||+.||+|||+. +|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 55543 278999999 6899999985321 234688889999999999999964 99
Q ss_pred eeCCCCCCCeEecCCCcEEEeecccccccccCCceeeeeeecccCccCccccccC-----------CCCccchhhhHHHH
Q 007668 429 IHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSG-----------RATEKTDVYSFGVL 497 (594)
Q Consensus 429 vH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~Dv~s~G~v 497 (594)
+||||||+|||++.++.+||+|||+++.... ......| +.|+|||++.+. .++.++||||||++
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~i 302 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLV 302 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHH
Confidence 9999999999999999999999999985332 2344567 999999999887 89999999999999
Q ss_pred HHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 498 VLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 498 l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
+|||++|+.||......... ..+.. ... ..+..+.+++.+||+.||++|||+.|+++
T Consensus 303 l~elltg~~Pf~~~~~~~~~---------------~~~~~-~~~----~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 303 IYWIWCADLPITKDAALGGS---------------EWIFR-SCK----NIPQPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp HHHHHHSSCCC------CCS---------------GGGGS-SCC----CCCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred HHHHHHCCCCCcccccccch---------------hhhhh-hcc----CCCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 99999999999764322111 11111 111 22367899999999999999999999985
No 173
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=4e-39 Score=320.61 Aligned_cols=250 Identities=27% Similarity=0.375 Sum_probs=200.4
Q ss_pred cCCCccceeeeecceEEEEEEec-CCcEEEEEeecccch------hhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceE
Q 007668 307 ETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNE------GFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKL 379 (594)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 379 (594)
++|...+.||+|+||.||++... +++.||+|.++.... ...+.+.+|++++++++||||+++++++.+....+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 46788899999999999999876 689999999875321 13577999999999999999999999999999999
Q ss_pred EEEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCC----cEEEeeccccc
Q 007668 380 LIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNL----EARVSDFGLAK 455 (594)
Q Consensus 380 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~----~~~l~Dfgl~~ 455 (594)
+||||+++++|.+++... ..+++..+..++.||+.||.|||+ .+++||||||+||+++.++ .++|+|||++.
T Consensus 85 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~ 160 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEK-ESLTEDEATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH 160 (283)
T ss_dssp EEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred EEEeecCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCChHHEEEecCCCCCCceEEEecccce
Confidence 999999999999999753 568999999999999999999995 4999999999999998777 89999999998
Q ss_pred ccccCCceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccc
Q 007668 456 LLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREI 535 (594)
Q Consensus 456 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 535 (594)
....... .....|++.|+|||.+.+..++.++||||||+++|+|++|+.||....... ......... ..
T Consensus 161 ~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~------~~~~~~~~~---~~ 229 (283)
T 3bhy_A 161 KIEAGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE------TLTNISAVN---YD 229 (283)
T ss_dssp ECC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHHHTTC---CC
T ss_pred eccCCCc--ccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHH------HHHHhHhcc---cC
Confidence 7654322 233468999999999999999999999999999999999999997643221 111110000 00
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 536 IDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 536 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
.+ .......+..+.+++.+||+.||++|||+.|+++
T Consensus 230 ~~---~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 265 (283)
T 3bhy_A 230 FD---EEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLE 265 (283)
T ss_dssp CC---HHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred Cc---chhcccCCHHHHHHHHHHccCCHhHCcCHHHHHh
Confidence 00 0000122356899999999999999999999986
No 174
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=1.1e-39 Score=326.69 Aligned_cols=248 Identities=24% Similarity=0.412 Sum_probs=204.8
Q ss_pred hcCCCccceeeeecceEEEEEEec-CCcEEEEEeeccc---chhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEE
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKL---NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLI 381 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv 381 (594)
..+|...+.||+|+||.||++... +++.+|+|.+... .....+.+.+|+++++.++||||+++++++.+....++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 357888899999999999999876 4788999998653 233456788999999999999999999999999999999
Q ss_pred EEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccCC
Q 007668 382 YDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEE 461 (594)
Q Consensus 382 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~ 461 (594)
|||+++++|.+++... ..+++..+..++.|+++||+|||+ .+++||||||+||+++.++.++|+|||++.......
T Consensus 94 ~e~~~~~~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 169 (294)
T 2rku_A 94 LELCRRRSLLELHKRR-KALTEPEARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 169 (294)
T ss_dssp EECCTTCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred EecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEcCCCCEEEEeccCceecccCc
Confidence 9999999999988753 568999999999999999999995 499999999999999999999999999998765332
Q ss_pred ceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCCCCC
Q 007668 462 SHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCE 541 (594)
Q Consensus 462 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (594)
.. .....||+.|+|||.+.+..++.++||||+|+++|+|++|+.||......+ ......... .
T Consensus 170 ~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~------~~~~~~~~~----------~ 232 (294)
T 2rku_A 170 ER-KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE------TYLRIKKNE----------Y 232 (294)
T ss_dssp CC-BCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHHHTTC----------C
T ss_pred cc-cccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHhhcc----------C
Confidence 22 234568999999999998889999999999999999999999997643221 111111100 0
Q ss_pred CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 542 GVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 542 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
..+......+.+++.+||+.||++|||++|+++
T Consensus 233 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~ 265 (294)
T 2rku_A 233 SIPKHINPVAASLIQKMLQTDPTARPTINELLN 265 (294)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred CCccccCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence 111223467889999999999999999999987
No 175
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=3.9e-39 Score=329.83 Aligned_cols=267 Identities=25% Similarity=0.371 Sum_probs=208.6
Q ss_pred HHHhcCCCccceeeeecceEEEEEEecCCcEEEEEeecccchhhHHHHHHHHHHHhh--CCCCeeeeeeeEEeCCC----
Q 007668 303 IKKLETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGS--IKHRYLVNLRGYCNSPT---- 376 (594)
Q Consensus 303 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~g~~~~~~---- 376 (594)
....++|...+.||+|+||.||+|.. +++.||||++.... ...+.+|++++.. ++||||+++++++....
T Consensus 38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~ 113 (342)
T 1b6c_B 38 RTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWT 113 (342)
T ss_dssp HHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCC
T ss_pred ccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCchh---HHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccc
Confidence 34457899999999999999999987 48999999986532 4567788888887 78999999999998776
Q ss_pred ceEEEEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcC-----CCCeeeCCCCCCCeEecCCCcEEEeec
Q 007668 377 SKLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDC-----SPRIIHRDIKSSNILLDGNLEARVSDF 451 (594)
Q Consensus 377 ~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~-----~~~ivH~Dlk~~NIll~~~~~~~l~Df 451 (594)
..++||||+++|+|.+++.. ..+++..++.++.|++.||+|||... +.+|+||||||+||+++.++.+||+||
T Consensus 114 ~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 191 (342)
T 1b6c_B 114 QLWLVSDYHEHGSLFDYLNR--YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 191 (342)
T ss_dssp CEEEEECCCTTCBHHHHHHH--CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCC
T ss_pred eeEEEEeecCCCcHHHHHhc--cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEEC
Confidence 78999999999999999975 35899999999999999999999310 248999999999999999999999999
Q ss_pred ccccccccCCcee---eeeeecccCccCccccccCC------CCccchhhhHHHHHHHHHhC----------CCCCCcch
Q 007668 452 GLAKLLEDEESHI---TTIVAGTFGYLAPEYMQSGR------ATEKTDVYSFGVLVLEVLSG----------KRPTDASF 512 (594)
Q Consensus 452 gl~~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~------~~~~~Dv~s~G~vl~elltg----------~~p~~~~~ 512 (594)
|++.......... .....||+.|+|||.+.+.. ++.++||||||+++|||++| ..||....
T Consensus 192 g~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~ 271 (342)
T 1b6c_B 192 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 271 (342)
T ss_dssp TTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTS
T ss_pred CCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccC
Confidence 9998765544321 23456899999999987652 33789999999999999999 67775432
Q ss_pred hcccchHHHHHHHHhcccccccccCCCCCC--CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccC
Q 007668 513 IEKGLNIVGWLNFLISEDRQREIIDPNCEG--VQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVM 581 (594)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~~ 581 (594)
... .....+..... .. ...+..+. ........+.+++.+||+.||++|||++||++.|++...
T Consensus 272 ~~~-~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~ 336 (342)
T 1b6c_B 272 PSD-PSVEEMRKVVC-EQ----KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 336 (342)
T ss_dssp CSS-CCHHHHHHHHT-TS----CCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCc-ccHHHHHHHHH-HH----HhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHH
Confidence 211 11122222111 11 11122221 223566789999999999999999999999999988654
No 176
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=1e-39 Score=324.93 Aligned_cols=250 Identities=28% Similarity=0.483 Sum_probs=203.5
Q ss_pred cCCCccceeeeecceEEEEEEec-CCcEEEEEeecccchhhHHHHHHHHHHHhhCCCCeeeeeeeEEeC-----------
Q 007668 307 ETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNS----------- 374 (594)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~----------- 374 (594)
.+|+..+.||+|+||.||+|... +++.||+|++..... .+.+|++++.+++||||+++++++..
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 86 (284)
T 2a19_B 11 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNE----KAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKN 86 (284)
T ss_dssp HHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCSG----GGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-------
T ss_pred cccceeeeeccCCceEEEEEEEcCCCeEEEEEEeccccH----HHHHHHHHHHhCCCCCEEEEeeeEeccccCccccccc
Confidence 56888899999999999999876 789999999976443 46789999999999999999998754
Q ss_pred -----CCceEEEEEccCCCchhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEE
Q 007668 375 -----PTSKLLIYDFLPGGSLDEALHER-SEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARV 448 (594)
Q Consensus 375 -----~~~~~lv~e~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l 448 (594)
....++||||+++++|.+++... ...+++..+..++.||+.||.|||+ .+|+||||||+||+++.++.++|
T Consensus 87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl 163 (284)
T 2a19_B 87 SSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHS---KKLINRDLKPSNIFLVDTKQVKI 163 (284)
T ss_dssp --CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEE
T ss_pred ccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCCHHHEEEcCCCCEEE
Confidence 44578999999999999999754 4579999999999999999999995 49999999999999999999999
Q ss_pred eecccccccccCCceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhc
Q 007668 449 SDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLIS 528 (594)
Q Consensus 449 ~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 528 (594)
+|||++........ .....|++.|+|||.+.+..++.++||||||+++|||++|..|+..... ..... .
T Consensus 164 ~Dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~--------~~~~~-~ 232 (284)
T 2a19_B 164 GDFGLVTSLKNDGK--RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSK--------FFTDL-R 232 (284)
T ss_dssp CCCTTCEESSCCSC--CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHH--------HHHHH-H
T ss_pred Ccchhheecccccc--ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHHH--------HHHHh-h
Confidence 99999987654332 2334689999999999999999999999999999999999998643210 11111 1
Q ss_pred ccccccccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccCCCCC
Q 007668 529 EDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVMTPCP 585 (594)
Q Consensus 529 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~~~~~~ 585 (594)
. ..+. ...+..+.+++.+||+.||++|||+.|+++.|+........
T Consensus 233 ~----~~~~-------~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~~ 278 (284)
T 2a19_B 233 D----GIIS-------DIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEK 278 (284)
T ss_dssp T----TCCC-------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC----
T ss_pred c----cccc-------ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCCc
Confidence 1 1111 12235688999999999999999999999999887655443
No 177
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=3.3e-39 Score=324.84 Aligned_cols=250 Identities=26% Similarity=0.404 Sum_probs=201.9
Q ss_pred hcCCCccceeeeecceEEEEEEec-CCcEEEEEeecccchhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEEEEc
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDF 384 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~ 384 (594)
.++|...+.||+|+||.||++... +|+.||+|.+........+.+.+|++++.+++||||+++++++.+....++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL 87 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence 356888899999999999999875 6899999999865554556789999999999999999999999999999999999
Q ss_pred cCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEe---cCCCcEEEeecccccccccCC
Q 007668 385 LPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILL---DGNLEARVSDFGLAKLLEDEE 461 (594)
Q Consensus 385 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll---~~~~~~~l~Dfgl~~~~~~~~ 461 (594)
+++++|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+||++ +.++.++|+|||++.......
T Consensus 88 ~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~ 163 (304)
T 2jam_A 88 VSGGELFDRILER-GVYTEKDASLVIQQVLSAVKYLHE---NGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGI 163 (304)
T ss_dssp CCSCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBT
T ss_pred CCCccHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCc
Confidence 9999999998764 568999999999999999999995 499999999999999 788899999999987644321
Q ss_pred ceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCCCCC
Q 007668 462 SHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCE 541 (594)
Q Consensus 462 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (594)
.....||+.|+|||.+.+..++.++||||+|+++|||++|+.||....... ......... . .. ..
T Consensus 164 ---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~------~~~~i~~~~-~-~~-~~--- 228 (304)
T 2jam_A 164 ---MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESK------LFEKIKEGY-Y-EF-ES--- 228 (304)
T ss_dssp ---THHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHH------HHHHHHHCC-C-CC-CT---
T ss_pred ---cccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH------HHHHHHcCC-C-CC-Cc---
Confidence 223468999999999999999999999999999999999999987542211 111111110 0 00 00
Q ss_pred CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 542 GVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 542 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
......+..+.+++.+||+.||++|||++|+++
T Consensus 229 ~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 229 PFWDDISESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp TTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred cccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 112234467899999999999999999999986
No 178
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=1.1e-39 Score=347.61 Aligned_cols=193 Identities=25% Similarity=0.365 Sum_probs=153.4
Q ss_pred cCCCccceeeeecceEEEEEEec-CCcEEEEEeeccc--chhhHHHHHHHHHHHhhCCCCeeeeeeeEEeC-----CCce
Q 007668 307 ETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKL--NEGFDRFFERELEILGSIKHRYLVNLRGYCNS-----PTSK 378 (594)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-----~~~~ 378 (594)
++|...+.||+|+||.||+|... +++.||||++... .....+.+.+|++++++++||||+++++++.. ....
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 132 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL 132 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence 57888999999999999999765 6899999998753 33345678999999999999999999999843 3568
Q ss_pred EEEEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccc
Q 007668 379 LLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLE 458 (594)
Q Consensus 379 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~ 458 (594)
++||||+ +++|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 133 ~lv~e~~-~~~L~~~~~~-~~~l~~~~~~~~~~qi~~aL~~LH~---~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~ 207 (458)
T 3rp9_A 133 YVVLEIA-DSDFKKLFRT-PVYLTELHIKTLLYNLLVGVKYVHS---AGILHRDLKPANCLVNQDCSVKVCDFGLARTVD 207 (458)
T ss_dssp EEEECCC-SEEHHHHHHS-SCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTCCEEECCCTTCBCTT
T ss_pred EEEEecc-ccchhhhccc-CCCCCHHHHHHHHHHHHHHHHHHHh---CCcCCCCCChhhEEECCCCCEeecccccchhcc
Confidence 9999998 5799999865 4569999999999999999999995 499999999999999999999999999998764
Q ss_pred cCCc--------------------------eeeeeeecccCccCcccc-ccCCCCccchhhhHHHHHHHHHhC
Q 007668 459 DEES--------------------------HITTIVAGTFGYLAPEYM-QSGRATEKTDVYSFGVLVLEVLSG 504 (594)
Q Consensus 459 ~~~~--------------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~Dv~s~G~vl~elltg 504 (594)
.... ......+||+.|+|||++ .+..++.++|||||||++|||++|
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 208 YPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp SCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred CccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 3221 122345789999999986 556799999999999999999994
No 179
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=1.2e-39 Score=336.06 Aligned_cols=262 Identities=23% Similarity=0.382 Sum_probs=203.3
Q ss_pred cCCCccceeeeecceEEEEEEec-CCcEEEEEeeccc-chhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEEEEc
Q 007668 307 ETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKL-NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDF 384 (594)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~ 384 (594)
++|...+.||+|+||.||++... ++..||+|++... .....+.+.+|++++.+++||||+++++++.+....++||||
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 112 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 112 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEEC
Confidence 56888899999999999999776 6899999998754 344467799999999999999999999999999999999999
Q ss_pred cCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccCCcee
Q 007668 385 LPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHI 464 (594)
Q Consensus 385 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~~~~ 464 (594)
+++++|.+++... ..+++..+..++.|++.||+|||+. .+|+||||||+||+++.++.++|+|||++.......
T Consensus 113 ~~~~~L~~~l~~~-~~~~~~~~~~i~~~i~~~l~~lh~~--~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--- 186 (360)
T 3eqc_A 113 MDGGSLDQVLKKA-GRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--- 186 (360)
T ss_dssp CTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHH--HCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC---
T ss_pred CCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHh--CCEEcCCccHHHEEECCCCCEEEEECCCCccccccc---
Confidence 9999999999764 4689999999999999999999952 289999999999999999999999999997654322
Q ss_pred eeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHH----------HHH--------
Q 007668 465 TTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWL----------NFL-------- 526 (594)
Q Consensus 465 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~----------~~~-------- 526 (594)
.....||+.|+|||++.+..++.++||||||+++|||++|+.||............... ...
T Consensus 187 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (360)
T 3eqc_A 187 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNK 266 (360)
T ss_dssp ----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC-----------------------
T ss_pred ccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccc
Confidence 23356899999999999999999999999999999999999999764322110000000 000
Q ss_pred --hcc-------cccccccCCCCCC-CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 527 --ISE-------DRQREIIDPNCEG-VQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 527 --~~~-------~~~~~~~~~~~~~-~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
... .....+....... .....+..+.+|+.+||+.||++|||++|+++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 324 (360)
T 3eqc_A 267 FGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 324 (360)
T ss_dssp -------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred cccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 000 0000000000000 11223467999999999999999999999985
No 180
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-39 Score=335.75 Aligned_cols=262 Identities=25% Similarity=0.374 Sum_probs=196.8
Q ss_pred cCCCccceeeeecceEEEEEEe-cCCcEEEEEeeccc--chhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCC------c
Q 007668 307 ETLDDDHIIGSGGFGTVYKLAM-DDGNVFALKRIDKL--NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPT------S 377 (594)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~------~ 377 (594)
++|...+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|+++++.++||||+++++++.... .
T Consensus 25 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~ 104 (367)
T 1cm8_A 25 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTD 104 (367)
T ss_dssp SSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCC
T ss_pred ceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCce
Confidence 5688889999999999999976 46899999998643 3334567889999999999999999999987653 4
Q ss_pred eEEEEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeeccccccc
Q 007668 378 KLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLL 457 (594)
Q Consensus 378 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~ 457 (594)
.++||||+ +++|.+++.. ..+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++..
T Consensus 105 ~~lv~e~~-~~~L~~~~~~--~~l~~~~~~~~~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 178 (367)
T 1cm8_A 105 FYLVMPFM-GTDLGKLMKH--EKLGEDRIQFLVYQMLKGLRYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGLARQA 178 (367)
T ss_dssp CEEEEECC-SEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEecC-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCcCHHHEEEcCCCCEEEEeeeccccc
Confidence 59999999 8899999875 468999999999999999999995 49999999999999999999999999999875
Q ss_pred ccCCceeeeeeecccCccCcccccc-CCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHH---------HHHHHh
Q 007668 458 EDEESHITTIVAGTFGYLAPEYMQS-GRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVG---------WLNFLI 527 (594)
Q Consensus 458 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~---------~~~~~~ 527 (594)
... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||......+...... +.....
T Consensus 179 ~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~ 254 (367)
T 1cm8_A 179 DSE----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQ 254 (367)
T ss_dssp CSS----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCS
T ss_pred ccc----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhh
Confidence 432 233568999999999877 679999999999999999999999997643221110000 000000
Q ss_pred cc------cccccccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHhc
Q 007668 528 SE------DRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ--ILES 578 (594)
Q Consensus 528 ~~------~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~--~L~~ 578 (594)
.. ..........+.......+..+.+|+.+||+.||++|||++|+++ .+++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~ 313 (367)
T 1cm8_A 255 SDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFES 313 (367)
T ss_dssp CHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTT
T ss_pred hHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHh
Confidence 00 000001111111122334567899999999999999999999987 4443
No 181
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=9e-40 Score=333.64 Aligned_cols=255 Identities=22% Similarity=0.340 Sum_probs=187.7
Q ss_pred cCCCccceeeeecceEEEEEEec-CCcEEEEEeecccchhhHHHHHHHHHHHhhCC-CCeeeeeeeEEe--------CCC
Q 007668 307 ETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNEGFDRFFERELEILGSIK-HRYLVNLRGYCN--------SPT 376 (594)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~--------~~~ 376 (594)
.+|+..+.||+|+||.||+|... +++.||+|++........+.+.+|+.++.++. ||||+++++++. ...
T Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~ 107 (337)
T 3ll6_A 28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQA 107 (337)
T ss_dssp EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSE
T ss_pred ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCc
Confidence 47888899999999999999864 68999999997766666778999999999996 999999999983 344
Q ss_pred ceEEEEEccCCCchhhhhhh--cCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccc
Q 007668 377 SKLLIYDFLPGGSLDEALHE--RSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLA 454 (594)
Q Consensus 377 ~~~lv~e~~~~gsL~~~l~~--~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~ 454 (594)
..++|+||++ |+|.+++.. ....+++..++.++.||+.||+|||+. .++|+||||||+|||++.++.+||+|||++
T Consensus 108 ~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~-~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~ 185 (337)
T 3ll6_A 108 EFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185 (337)
T ss_dssp EEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS-SSCCBCCCCCGGGCEECTTSCEEBCCCTTC
T ss_pred eEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC-CCCEEEccCCcccEEECCCCCEEEecCccc
Confidence 4789999995 799998864 345699999999999999999999954 122999999999999999999999999999
Q ss_pred cccccCCcee-----------eeeeecccCccCcccc---ccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHH
Q 007668 455 KLLEDEESHI-----------TTIVAGTFGYLAPEYM---QSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIV 520 (594)
Q Consensus 455 ~~~~~~~~~~-----------~~~~~gt~~y~aPE~~---~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~ 520 (594)
.......... .....||+.|+|||++ .+..++.++||||||+++|||++|+.||........
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~---- 261 (337)
T 3ll6_A 186 TTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRI---- 261 (337)
T ss_dssp BCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC------------
T ss_pred eeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHh----
Confidence 8765432211 1134589999999998 566789999999999999999999999865322110
Q ss_pred HHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccC
Q 007668 521 GWLNFLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVM 581 (594)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~~ 581 (594)
. ...... + ........+.+++.+||+.||++|||++|+++.|+....
T Consensus 262 --~-----~~~~~~---~----~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~ 308 (337)
T 3ll6_A 262 --V-----NGKYSI---P----PHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAA 308 (337)
T ss_dssp -----------CCC---C----TTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --h-----cCcccC---C----cccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 0 000000 0 011122447899999999999999999999999987643
No 182
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=1.1e-39 Score=333.22 Aligned_cols=251 Identities=23% Similarity=0.349 Sum_probs=199.5
Q ss_pred hcCCCccceeeeecceEEEEEEec-CCcEEEEEeecccchhhHHHHHHHHHHHhhC-CCCeeeeeeeEEeCCCceEEEEE
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNEGFDRFFERELEILGSI-KHRYLVNLRGYCNSPTSKLLIYD 383 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e 383 (594)
.++|...+.||+|+||.||++... +++.||+|.+...... ..+|++++.++ +||||+++++++.+....++|||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E 96 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD----PTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTE 96 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC----CHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC----hHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEe
Confidence 467888999999999999999765 5889999999764332 35688888887 79999999999999999999999
Q ss_pred ccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCC----CcEEEeeccccccccc
Q 007668 384 FLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGN----LEARVSDFGLAKLLED 459 (594)
Q Consensus 384 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~----~~~~l~Dfgl~~~~~~ 459 (594)
|+++|+|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+|||+.++ +.+||+|||++.....
T Consensus 97 ~~~gg~L~~~i~~~-~~~~~~~~~~~~~qi~~al~~lH~---~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~ 172 (342)
T 2qr7_A 97 LMKGGELLDKILRQ-KFFSEREASAVLFTITKTVEYLHA---QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRA 172 (342)
T ss_dssp CCCSCBHHHHHHTC-TTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBC
T ss_pred CCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH---CCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcC
Confidence 99999999999753 569999999999999999999995 499999999999998533 3599999999987654
Q ss_pred CCceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCCC
Q 007668 460 EESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPN 539 (594)
Q Consensus 460 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (594)
... ......||+.|+|||++.+..++.++||||+|+++|||++|..||....... ............ . . +.
T Consensus 173 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~---~~~~~~~i~~~~-~-~-~~-- 243 (342)
T 2qr7_A 173 ENG-LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDT---PEEILARIGSGK-F-S-LS-- 243 (342)
T ss_dssp TTC-CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSC---HHHHHHHHHHCC-C-C-CC--
T ss_pred CCC-ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCC---HHHHHHHHccCC-c-c-cC--
Confidence 332 2334578999999999988888999999999999999999999997532211 111111111111 0 0 00
Q ss_pred CCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 540 CEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 540 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
.......+..+.+++.+||+.||++|||+.|+++
T Consensus 244 -~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 244 -GGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp -STTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred -ccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0112234467899999999999999999999875
No 183
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=7.9e-40 Score=361.57 Aligned_cols=257 Identities=24% Similarity=0.363 Sum_probs=206.0
Q ss_pred HhcCCCccceeeeecceEEEEEEecC----CcEEEEEeeccc-chhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceE
Q 007668 305 KLETLDDDHIIGSGGFGTVYKLAMDD----GNVFALKRIDKL-NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKL 379 (594)
Q Consensus 305 ~~~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 379 (594)
..++|...+.||+|+||.||+|.... +..||+|++... .....+.+.+|+.++++++||||+++++++.+ +..+
T Consensus 388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~~~ 466 (656)
T 2j0j_A 388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVW 466 (656)
T ss_dssp CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE
T ss_pred ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-CceE
Confidence 34678888999999999999998643 457999998753 33445779999999999999999999999854 5689
Q ss_pred EEEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeeccccccccc
Q 007668 380 LIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLED 459 (594)
Q Consensus 380 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~ 459 (594)
+||||+++|+|.++++.+...+++..+..++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 467 lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~ 543 (656)
T 2j0j_A 467 IIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 543 (656)
T ss_dssp EEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC
T ss_pred EEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccchHhEEEeCCCCEEEEecCCCeecCC
Confidence 9999999999999998766679999999999999999999995 4999999999999999999999999999987765
Q ss_pred CCceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHHHHhcccccccccCC
Q 007668 460 EESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDP 538 (594)
Q Consensus 460 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 538 (594)
..........+|+.|+|||++.+..++.++||||||+++|||++ |..||......+ ..........
T Consensus 544 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~------~~~~i~~~~~------- 610 (656)
T 2j0j_A 544 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND------VIGRIENGER------- 610 (656)
T ss_dssp ----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH------HHHHHHHTCC-------
T ss_pred CcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHH------HHHHHHcCCC-------
Confidence 44333344567889999999999999999999999999999997 999987643221 1111111110
Q ss_pred CCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccc
Q 007668 539 NCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEV 580 (594)
Q Consensus 539 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~ 580 (594)
...+...+..+.+++.+||+.||++|||+.|+++.|++.+
T Consensus 611 --~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il 650 (656)
T 2j0j_A 611 --LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 650 (656)
T ss_dssp --CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --CCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 0112234467899999999999999999999999998764
No 184
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=9.9e-40 Score=335.58 Aligned_cols=265 Identities=23% Similarity=0.340 Sum_probs=200.6
Q ss_pred hcCCCccceeeeecceEEEEEEe-cCCcEEEEEeecccc--hhhHHHHHHHHHHHhhCCCCeeeeeeeEEeC--------
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAM-DDGNVFALKRIDKLN--EGFDRFFERELEILGSIKHRYLVNLRGYCNS-------- 374 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-------- 374 (594)
..+|...+.||+|+||.||+|.. .+|+.||+|++.... ......+.+|+++++.++||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 46888999999999999999987 578999999986432 2334578899999999999999999999876
Q ss_pred CCceEEEEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccc
Q 007668 375 PTSKLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLA 454 (594)
Q Consensus 375 ~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~ 454 (594)
....++||||++ |+|.+.+......+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||++
T Consensus 96 ~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 171 (351)
T 3mi9_A 96 KGSIYLVFDFCE-HDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLA 171 (351)
T ss_dssp -CEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CceEEEEEeccC-CCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCHHHEEEcCCCCEEEccchhc
Confidence 346789999996 58888887766779999999999999999999995 49999999999999999999999999999
Q ss_pred cccccCC---ceeeeeeecccCccCcccccc-CCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhccc
Q 007668 455 KLLEDEE---SHITTIVAGTFGYLAPEYMQS-GRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISED 530 (594)
Q Consensus 455 ~~~~~~~---~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 530 (594)
+...... ........||+.|+|||++.+ ..++.++||||||+++|||++|+.||......................
T Consensus 172 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~ 251 (351)
T 3mi9_A 172 RAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE 251 (351)
T ss_dssp EECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTT
T ss_pred ccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChh
Confidence 8765322 122234568999999999876 458999999999999999999999998643322111111000000000
Q ss_pred cccc-----------ccCCCCCCCCHH-----HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 531 RQRE-----------IIDPNCEGVQSE-----SLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 531 ~~~~-----------~~~~~~~~~~~~-----~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
.... ............ ....+.+|+.+||+.||++|||++|+++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 311 (351)
T 3mi9_A 252 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311 (351)
T ss_dssp TSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence 0000 000000000000 1345889999999999999999999886
No 185
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=1e-39 Score=350.33 Aligned_cols=251 Identities=24% Similarity=0.339 Sum_probs=204.7
Q ss_pred cCCCccceeeeecceEEEEEEec-CCcEEEEEeecccc---hhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEEE
Q 007668 307 ETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLN---EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIY 382 (594)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ 382 (594)
++|...+.||+|+||.||++... +|+.||+|++.+.. ......+.+|++++.+++||||+++++++.+....++||
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm 264 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM 264 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence 56788899999999999999875 68999999997532 223467889999999999999999999999999999999
Q ss_pred EccCCCchhhhhhhc---CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeeccccccccc
Q 007668 383 DFLPGGSLDEALHER---SEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLED 459 (594)
Q Consensus 383 e~~~~gsL~~~l~~~---~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~ 459 (594)
||+++|+|.+++... ...+++..+..++.||+.||.|||+ .+|+||||||+|||++.++++||+|||+++....
T Consensus 265 E~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~---~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~ 341 (543)
T 3c4z_A 265 TIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKA 341 (543)
T ss_dssp CCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHH---cCCcccCCChHHEEEeCCCCEEEeecceeeeccC
Confidence 999999999998753 3469999999999999999999995 4999999999999999999999999999987654
Q ss_pred CCceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCCC
Q 007668 460 EESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPN 539 (594)
Q Consensus 460 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (594)
.... .....||+.|+|||++.+..++.++|||||||++|||++|+.||....... .............
T Consensus 342 ~~~~-~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~--~~~~~~~~i~~~~--------- 409 (543)
T 3c4z_A 342 GQTK-TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV--ENKELKQRVLEQA--------- 409 (543)
T ss_dssp TCCC-BCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCC--CHHHHHHHHHHCC---------
T ss_pred CCcc-cccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccch--hHHHHHHHHhhcc---------
Confidence 3322 334579999999999999999999999999999999999999997643211 1111111111111
Q ss_pred CCCCCHHHHHHHHHHHHHcccCCCCCCCCH-----HHHH
Q 007668 540 CEGVQSESLDALLAVATQCVSSSPDDRPTM-----HRVV 573 (594)
Q Consensus 540 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~-----~ev~ 573 (594)
...+...+..+.+++.+||+.||++||++ ++++
T Consensus 410 -~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~ 447 (543)
T 3c4z_A 410 -VTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLR 447 (543)
T ss_dssp -CCCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHH
T ss_pred -cCCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHH
Confidence 01122345678999999999999999975 5665
No 186
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=2.2e-39 Score=338.23 Aligned_cols=249 Identities=22% Similarity=0.327 Sum_probs=189.7
Q ss_pred cCCCcc-ceeeeecceEEEEEEec-CCcEEEEEeecccchhhHHHHHHHHHHHh-hCCCCeeeeeeeEEeC----CCceE
Q 007668 307 ETLDDD-HIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNEGFDRFFERELEILG-SIKHRYLVNLRGYCNS----PTSKL 379 (594)
Q Consensus 307 ~~~~~~-~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~-~l~h~niv~l~g~~~~----~~~~~ 379 (594)
++|... +.||+|+||+||++... +++.||||++... ..+.+|++++. ..+||||+++++++.. ....+
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~ 135 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 135 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEE
Confidence 455554 68999999999999765 6889999998642 35677888864 4589999999998864 56689
Q ss_pred EEEEccCCCchhhhhhhcC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecC---CCcEEEeeccccc
Q 007668 380 LIYDFLPGGSLDEALHERS-EQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDG---NLEARVSDFGLAK 455 (594)
Q Consensus 380 lv~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~---~~~~~l~Dfgl~~ 455 (594)
+||||+++|+|.+++.... ..+++..+..++.||+.||.|||+ .+|+||||||+|||++. ++.+||+|||+++
T Consensus 136 lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~ 212 (400)
T 1nxk_A 136 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 212 (400)
T ss_dssp EEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCcCcceEEEecCCCCccEEEEeccccc
Confidence 9999999999999998643 469999999999999999999995 49999999999999997 7899999999998
Q ss_pred ccccCCceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccc-hHHHHHHHHhccccccc
Q 007668 456 LLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGL-NIVGWLNFLISEDRQRE 534 (594)
Q Consensus 456 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 534 (594)
...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......... .....+ ..... .
T Consensus 213 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i----~~~~~-~ 285 (400)
T 1nxk_A 213 ETTSHN--SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI----RMGQY-E 285 (400)
T ss_dssp ECC-------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHH----HHTCC-C
T ss_pred ccCCCC--ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHH----HcCcc-c
Confidence 655332 223457899999999999999999999999999999999999999764332110 011110 00100 0
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 535 IIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 535 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
...+. ....+..+.+|+.+||+.||++|||+.|+++
T Consensus 286 ~~~~~----~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~ 321 (400)
T 1nxk_A 286 FPNPE----WSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 321 (400)
T ss_dssp CCTTT----TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred CCCcc----cccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 01111 1233467899999999999999999999987
No 187
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=1.4e-39 Score=322.59 Aligned_cols=247 Identities=21% Similarity=0.372 Sum_probs=195.9
Q ss_pred hcCCCccceeeeecceEEEEEEec-CCcEEEEEeecccc---hhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEE
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLN---EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLI 381 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv 381 (594)
.++|...+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|+++++.++||||+++++++.+....++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 357888999999999999999876 78999999986532 23356789999999999999999999999999999999
Q ss_pred EEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccCC
Q 007668 382 YDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEE 461 (594)
Q Consensus 382 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~ 461 (594)
|||+++++|.+++... ..+++..+..++.||+.||+|||+. +++||||||+||+++.++.++|+|||++.......
T Consensus 90 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~ 165 (276)
T 2h6d_A 90 MEYVSGGELFDYICKH-GRVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 165 (276)
T ss_dssp EECCCSCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC--
T ss_pred EeccCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccCCCc
Confidence 9999999999999764 4689999999999999999999965 99999999999999999999999999998765432
Q ss_pred ceeeeeeecccCccCccccccCCC-CccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCCCC
Q 007668 462 SHITTIVAGTFGYLAPEYMQSGRA-TEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNC 540 (594)
Q Consensus 462 ~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 540 (594)
. .....|++.|+|||.+.+..+ +.++||||||+++|+|++|+.||...... ........ .. .
T Consensus 166 ~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~------~~~~~~~~-~~--~------ 228 (276)
T 2h6d_A 166 F--LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVP------TLFKKIRG-GV--F------ 228 (276)
T ss_dssp -------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHH-CC--C------
T ss_pred c--eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHH------HHHHHhhc-Cc--c------
Confidence 2 233468999999999987765 68999999999999999999999763221 11111111 10 0
Q ss_pred CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 541 EGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 541 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
..+......+.+++.+||+.||++|||++|+++
T Consensus 229 -~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~ 261 (276)
T 2h6d_A 229 -YIPEYLNRSVATLLMHMLQVDPLKRATIKDIRE 261 (276)
T ss_dssp -CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred -cCchhcCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 011223467899999999999999999999987
No 188
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=1.2e-39 Score=332.71 Aligned_cols=252 Identities=24% Similarity=0.413 Sum_probs=206.6
Q ss_pred hcCCCccceeeeecceEEEEEEec-CCcEEEEEeeccc---chhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEE
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKL---NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLI 381 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv 381 (594)
..+|...+.||+|+||.||++... +++.||+|.+... .....+.+.+|+.+++.++||||+++++++.+....++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 357888899999999999999776 4788999998653 334456789999999999999999999999999999999
Q ss_pred EEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccCC
Q 007668 382 YDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEE 461 (594)
Q Consensus 382 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~ 461 (594)
|||+++++|.+++... ..+++..+..++.||+.||.|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 120 ~e~~~~~~L~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 195 (335)
T 2owb_A 120 LELCRRRSLLELHKRR-KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 195 (335)
T ss_dssp ECCCTTCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred EecCCCCCHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceecccCc
Confidence 9999999999988753 5689999999999999999999954 99999999999999999999999999998765332
Q ss_pred ceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCCCCC
Q 007668 462 SHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCE 541 (594)
Q Consensus 462 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (594)
. ......||+.|+|||++.+..++.++||||||+++|||++|+.||......+ ......... . .
T Consensus 196 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~------~~~~~~~~~---~----~-- 259 (335)
T 2owb_A 196 E-RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE------TYLRIKKNE---Y----S-- 259 (335)
T ss_dssp C-CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHHHHTC---C----C--
T ss_pred c-cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHH------HHHHHhcCC---C----C--
Confidence 2 2234568999999999998899999999999999999999999997643221 111111110 0 0
Q ss_pred CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHhc
Q 007668 542 GVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ--ILES 578 (594)
Q Consensus 542 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~--~L~~ 578 (594)
.+......+.+++.+||+.||++|||++|+++ .+.+
T Consensus 260 -~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~~~~~~ 297 (335)
T 2owb_A 260 -IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTS 297 (335)
T ss_dssp -CCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHT
T ss_pred -CCccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccC
Confidence 11223356889999999999999999999986 4443
No 189
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.5e-39 Score=327.15 Aligned_cols=250 Identities=28% Similarity=0.424 Sum_probs=201.2
Q ss_pred hcCCCccceeeeecceEEEEEEec-CCcEEEEEeecccchhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEEEEc
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDF 384 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~ 384 (594)
.++|+..+.||+|+||.||+|... +|+.||+|.+.... ..+.+.+|++++.+++||||+++++++.+....++||||
T Consensus 28 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 105 (314)
T 3com_A 28 EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEY 105 (314)
T ss_dssp --CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeec
Confidence 467888999999999999999776 58999999987543 245788999999999999999999999999999999999
Q ss_pred cCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccCCcee
Q 007668 385 LPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHI 464 (594)
Q Consensus 385 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~~~~ 464 (594)
+++++|.+++......+++..+..++.||+.||.|||+ .+++||||||+||+++.++.++|+|||++........ .
T Consensus 106 ~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~-~ 181 (314)
T 3com_A 106 CGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHF---MRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMA-K 181 (314)
T ss_dssp CTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBS-C
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhcc-c
Confidence 99999999998666789999999999999999999995 4999999999999999999999999999987654322 2
Q ss_pred eeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCCCCCCCC
Q 007668 465 TTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQ 544 (594)
Q Consensus 465 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (594)
.....|++.|+|||.+.+..++.++||||||+++|+|++|+.||........ ... ..... .+.. ..+
T Consensus 182 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~------~~~-~~~~~-----~~~~-~~~ 248 (314)
T 3com_A 182 RNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRA------IFM-IPTNP-----PPTF-RKP 248 (314)
T ss_dssp BCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHH------HHH-HHHSC-----CCCC-SSG
T ss_pred cCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHH------HHH-HhcCC-----Cccc-CCc
Confidence 2345689999999999998999999999999999999999999975322110 000 00010 0000 112
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 545 SESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 545 ~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
...+..+.+++.+||+.||++|||+.++++
T Consensus 249 ~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 249 ELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp GGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 233467899999999999999999999975
No 190
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=1.8e-39 Score=326.53 Aligned_cols=248 Identities=29% Similarity=0.444 Sum_probs=204.9
Q ss_pred hcCCCccceeeeecceEEEEEEec-CCcEEEEEeecccc-hhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEEEE
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLN-EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYD 383 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e 383 (594)
.+.|...+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|+.++++++||||+++++++.+....++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 100 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 100 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence 356888899999999999999754 68899999987532 3345789999999999999999999999999999999999
Q ss_pred ccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccCCce
Q 007668 384 FLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESH 463 (594)
Q Consensus 384 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~~~ 463 (594)
|+++++|.+++.. ..+++..+..++.|++.||.|||+ .+|+||||||+||+++.++.++|+|||++........
T Consensus 101 ~~~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 174 (303)
T 3a7i_A 101 YLGGGSALDLLEP--GPLDETQIATILREILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI- 174 (303)
T ss_dssp CCTTEEHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBC-
T ss_pred eCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCChheEEECCCCCEEEeecccceecCcccc-
Confidence 9999999999864 569999999999999999999995 4999999999999999999999999999987654332
Q ss_pred eeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCCCCCCC
Q 007668 464 ITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGV 543 (594)
Q Consensus 464 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 543 (594)
......|++.|+|||.+.+..++.++||||||+++|+|++|+.||....... .... ..... . + ..
T Consensus 175 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~------~~~~-~~~~~-~----~---~~ 239 (303)
T 3a7i_A 175 KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMK------VLFL-IPKNN-P----P---TL 239 (303)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH------HHHH-HHHSC-C----C---CC
T ss_pred ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHH------HHHH-hhcCC-C----C---CC
Confidence 2234568999999999999999999999999999999999999987532211 1111 11110 0 1 11
Q ss_pred CHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 544 QSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 544 ~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
....+..+.+++.+||+.||++|||+.|+++
T Consensus 240 ~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 270 (303)
T 3a7i_A 240 EGNYSKPLKEFVEACLNKEPSFRPTAKELLK 270 (303)
T ss_dssp CSSCCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred ccccCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 2233467899999999999999999999986
No 191
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=4.1e-40 Score=340.98 Aligned_cols=253 Identities=10% Similarity=0.021 Sum_probs=182.3
Q ss_pred cCCCccceeeeecceEEEEEEec-CCcEEEEEeecccch---hhHHHHHHHHHHHhhC--CCCeeeeee-------eEEe
Q 007668 307 ETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNE---GFDRFFERELEILGSI--KHRYLVNLR-------GYCN 373 (594)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l--~h~niv~l~-------g~~~ 373 (594)
..|...+.||+|+||.||+|... +++.||||++..... ...+.+.+|++++..+ +||||++++ +++.
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~ 141 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA 141 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence 45788899999999999999865 789999999986432 3345677885554444 699988754 4443
Q ss_pred CC-----------------CceEEEEEccCCCchhhhhhhcCCCCCHHHH------HHHHHHHHHHHHHhhhcCCCCeee
Q 007668 374 SP-----------------TSKLLIYDFLPGGSLDEALHERSEQLDWDAR------LNIIMGAAKGLAYLHHDCSPRIIH 430 (594)
Q Consensus 374 ~~-----------------~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~------~~i~~~ia~~L~~LH~~~~~~ivH 430 (594)
.. ...++||||++ |+|.+++......+++..+ ..++.||+.||+|||+ .+|+|
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~---~~ivH 217 (371)
T 3q60_A 142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQS---KGLVH 217 (371)
T ss_dssp ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHH---TTEEE
T ss_pred cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHH---CCCcc
Confidence 22 33799999998 8999999875555666666 7888999999999995 49999
Q ss_pred CCCCCCCeEecCCCcEEEeecccccccccCCceeeeeeecccCccCcccccc--CCCCccchhhhHHHHHHHHHhCCCCC
Q 007668 431 RDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQS--GRATEKTDVYSFGVLVLEVLSGKRPT 508 (594)
Q Consensus 431 ~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~s~G~vl~elltg~~p~ 508 (594)
|||||+|||++.++.+||+|||+++..... .....+|+.|+|||++.+ ..++.++||||||+++|||++|+.||
T Consensus 218 rDikp~NIll~~~~~~kL~DFG~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf 293 (371)
T 3q60_A 218 GHFTPDNLFIMPDGRLMLGDVSALWKVGTR----GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPF 293 (371)
T ss_dssp TTCSGGGEEECTTSCEEECCGGGEEETTCE----EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCST
T ss_pred CcCCHHHEEECCCCCEEEEecceeeecCCC----ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCC
Confidence 999999999999999999999999865432 223457799999999987 67999999999999999999999999
Q ss_pred CcchhcccchHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 509 DASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
.......... +...............+ .....+..+.+++.+||+.||++|||+.|+++
T Consensus 294 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~----~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 294 GLVTPGIKGS---WKRPSLRVPGTDSLAFG----SCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp TBCCTTCTTC---CCBCCTTSCCCCSCCCT----TSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred CCcCcccccc---hhhhhhhhccccccchh----hccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 7753221100 00000000000001111 11234567999999999999999999999874
No 192
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=1e-39 Score=332.29 Aligned_cols=264 Identities=20% Similarity=0.292 Sum_probs=193.3
Q ss_pred HHHhcCCCccceeeeecceEEEEEEec-CCcEEEEEeecccch--hhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceE
Q 007668 303 IKKLETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNE--GFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKL 379 (594)
Q Consensus 303 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 379 (594)
....++|...+.||+|+||.||+|... +++.||||++..... ...+.+.+|++++++++||||+++++++.+....+
T Consensus 30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 109 (329)
T 3gbz_A 30 ATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLH 109 (329)
T ss_dssp --CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEE
T ss_pred ccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEE
Confidence 344678999999999999999999754 688999999975332 23456789999999999999999999999999999
Q ss_pred EEEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEec-----CCCcEEEeecccc
Q 007668 380 LIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLD-----GNLEARVSDFGLA 454 (594)
Q Consensus 380 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~-----~~~~~~l~Dfgl~ 454 (594)
+||||++ |+|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+|||++ .++.+||+|||++
T Consensus 110 lv~e~~~-~~L~~~~~~~-~~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a 184 (329)
T 3gbz_A 110 LIFEYAE-NDLKKYMDKN-PDVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLA 184 (329)
T ss_dssp EEEECCS-EEHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTTHH
T ss_pred EEEecCC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCCCc
Confidence 9999997 5999999764 4699999999999999999999964 999999999999994 4556999999999
Q ss_pred cccccCCceeeeeeecccCccCccccccC-CCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhccc--c
Q 007668 455 KLLEDEESHITTIVAGTFGYLAPEYMQSG-RATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISED--R 531 (594)
Q Consensus 455 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--~ 531 (594)
........ ......||+.|+|||++.+. .++.++||||||+++|||++|+.||......+. ............ .
T Consensus 185 ~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~ 261 (329)
T 3gbz_A 185 RAFGIPIR-QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQ--LFKIFEVLGLPDDTT 261 (329)
T ss_dssp HHHC------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHHHCCCCTTT
T ss_pred cccCCccc-ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHH--HHHHHHHhCCCchhh
Confidence 87653322 22345689999999999874 489999999999999999999999976432211 111111000000 0
Q ss_pred ccc-----ccC---CCCCCC------CHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 532 QRE-----IID---PNCEGV------QSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 532 ~~~-----~~~---~~~~~~------~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
... ... +..... .......+.+|+.+||+.||++|||++|+++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 262 WPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp STTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 000 000 000000 0113467889999999999999999999875
No 193
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=2.6e-39 Score=344.07 Aligned_cols=262 Identities=20% Similarity=0.256 Sum_probs=206.6
Q ss_pred cCCCccceeeeecceEEEEEEe-cCCcEEEEEeecccchhhHHHHHHHHHHHhhCCC-CeeeeeeeEEeCCCceEEEEEc
Q 007668 307 ETLDDDHIIGSGGFGTVYKLAM-DDGNVFALKRIDKLNEGFDRFFERELEILGSIKH-RYLVNLRGYCNSPTSKLLIYDF 384 (594)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~g~~~~~~~~~lv~e~ 384 (594)
++|...+.||+|+||.||+|.. .+++.||||++..... ...+.+|++++..++| +++..+..++.+....++||||
T Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~ 84 (483)
T 3sv0_A 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDL 84 (483)
T ss_dssp TTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred CcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEEC
Confidence 5788899999999999999986 5689999998765332 2357889999999987 5555666666778888999999
Q ss_pred cCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEe---cCCCcEEEeecccccccccCC
Q 007668 385 LPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILL---DGNLEARVSDFGLAKLLEDEE 461 (594)
Q Consensus 385 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll---~~~~~~~l~Dfgl~~~~~~~~ 461 (594)
+ +++|.+++......+++..++.|+.||+.||+|||+ .+|+||||||+|||+ +.++.+||+|||+++.+....
T Consensus 85 ~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~---~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (483)
T 3sv0_A 85 L-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHS---KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTS 160 (483)
T ss_dssp C-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTT
T ss_pred C-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCc
Confidence 9 999999998766789999999999999999999995 499999999999999 688999999999998766543
Q ss_pred ce------eeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccc
Q 007668 462 SH------ITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREI 535 (594)
Q Consensus 462 ~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 535 (594)
.. ......||+.|+|||++.+..++.++||||||+++|||++|+.||..........................+
T Consensus 161 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l 240 (483)
T 3sv0_A 161 THQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEAL 240 (483)
T ss_dssp TCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHHHH
T ss_pred cccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHHHH
Confidence 22 122467999999999999999999999999999999999999999764332211111111111000000000
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccCC
Q 007668 536 IDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVMT 582 (594)
Q Consensus 536 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~~~ 582 (594)
....+.++.+++.+||+.+|++||++++|++.|+..+..
T Consensus 241 --------~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~ 279 (483)
T 3sv0_A 241 --------CRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIR 279 (483)
T ss_dssp --------HTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred --------hcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHH
Confidence 011236789999999999999999999999999987553
No 194
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=6.7e-40 Score=329.45 Aligned_cols=257 Identities=24% Similarity=0.382 Sum_probs=185.6
Q ss_pred hcCCCccceeeeecceEEEEEEec-CCcEEEEEeecccc-hhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEEEE
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLN-EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYD 383 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e 383 (594)
.++|...+.||+|+||.||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++......++|||
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 93 (303)
T 2vwi_A 14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMK 93 (303)
T ss_dssp CCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEE
T ss_pred hhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEeh
Confidence 468889999999999999999754 68899999986532 3335678899999999999999999999999999999999
Q ss_pred ccCCCchhhhhhh-------cCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccc
Q 007668 384 FLPGGSLDEALHE-------RSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKL 456 (594)
Q Consensus 384 ~~~~gsL~~~l~~-------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~ 456 (594)
|+++++|.+++.. ....+++..+..++.||+.||+|||+ .+++||||||+||+++.++.++|+|||++..
T Consensus 94 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~ 170 (303)
T 2vwi_A 94 LLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK---NGQIHRDVKAGNILLGEDGSVQIADFGVSAF 170 (303)
T ss_dssp CCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTCCEEECCCHHHHH
T ss_pred hccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHh---CCCCCCCCChhhEEEcCCCCEEEEeccchhe
Confidence 9999999999874 24558999999999999999999995 4999999999999999999999999999976
Q ss_pred cccCCc----eeeeeeecccCccCcccccc-CCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccc
Q 007668 457 LEDEES----HITTIVAGTFGYLAPEYMQS-GRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDR 531 (594)
Q Consensus 457 ~~~~~~----~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 531 (594)
...... .......||+.|+|||.+.+ ..++.++||||||+++|||++|+.||........ .........
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~------~~~~~~~~~ 244 (303)
T 2vwi_A 171 LATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKV------LMLTLQNDP 244 (303)
T ss_dssp CC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGH------HHHHHTSSC
T ss_pred eccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhH------HHHHhccCC
Confidence 653321 11234568999999999875 5689999999999999999999999976432211 011111110
Q ss_pred c---ccccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 532 Q---REIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 532 ~---~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
. ....++ ......+..+.+++.+||+.||++|||+.|+++
T Consensus 245 ~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 245 PSLETGVQDK---EMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp CCTTC--------CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred Cccccccccc---hhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 0 000011 111233467899999999999999999999975
No 195
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=1.4e-38 Score=317.94 Aligned_cols=248 Identities=24% Similarity=0.370 Sum_probs=196.4
Q ss_pred CCCccceeeeecceEEEEEEec-CCcEEEEEeeccc--chhhHHHHHHHHHHHhhCCCCeeeeeeeEEeC----CCceEE
Q 007668 308 TLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKL--NEGFDRFFERELEILGSIKHRYLVNLRGYCNS----PTSKLL 380 (594)
Q Consensus 308 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~----~~~~~l 380 (594)
.|...+.||+|+||.||+|... ++..||+|.+... .....+.+.+|+.++++++||||+++++++.. ....++
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 106 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence 4667788999999999999764 5788999998753 34446778999999999999999999998754 455789
Q ss_pred EEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEec-CCCcEEEeeccccccccc
Q 007668 381 IYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLD-GNLEARVSDFGLAKLLED 459 (594)
Q Consensus 381 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~-~~~~~~l~Dfgl~~~~~~ 459 (594)
||||+++++|.+++... ..+++..+..++.||+.||.|||+. ..+|+||||||+||+++ .++.++|+|||++.....
T Consensus 107 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~-~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~ 184 (290)
T 1t4h_A 107 VTELMTSGTLKTYLKRF-KVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 184 (290)
T ss_dssp EEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred EEEecCCCCHHHHHHHc-cCCCHHHHHHHHHHHHHHHHHHHcC-CCCEEECCCCHHHEEEECCCCCEEEeeCCCcccccc
Confidence 99999999999999764 5689999999999999999999954 12399999999999998 789999999999976543
Q ss_pred CCceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCCC
Q 007668 460 EESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPN 539 (594)
Q Consensus 460 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (594)
.. .....||+.|+|||.+. +.++.++||||+|+++|+|++|+.||...... ........... ....
T Consensus 185 ~~---~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-----~~~~~~~~~~~-~~~~---- 250 (290)
T 1t4h_A 185 SF---AKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNA-----AQIYRRVTSGV-KPAS---- 250 (290)
T ss_dssp TS---BEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH-----HHHHHHHTTTC-CCGG----
T ss_pred cc---cccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcH-----HHHHHHHhccC-Cccc----
Confidence 32 23456899999999887 46899999999999999999999999653211 11111111111 1111
Q ss_pred CCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 540 CEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 540 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
.....+..+.+++.+||+.||++|||++|+++
T Consensus 251 ---~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 251 ---FDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp ---GGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ---cCCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 11122356899999999999999999999985
No 196
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=1.1e-39 Score=332.34 Aligned_cols=264 Identities=23% Similarity=0.391 Sum_probs=199.5
Q ss_pred hcCCCccceeeeecceEEEEEEec-CCcEEEEEeecccc--hhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEEE
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLN--EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIY 382 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ 382 (594)
.++|+..+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+....++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 103 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF 103 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence 568889999999999999999876 48999999986532 333566889999999999999999999999999999999
Q ss_pred EccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccCCc
Q 007668 383 DFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEES 462 (594)
Q Consensus 383 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~~ 462 (594)
||+++++|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||++........
T Consensus 104 e~~~~~~l~~~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 179 (331)
T 4aaa_A 104 EFVDHTILDDLELF-PNGLDYQVVQKYLFQIINGIGFCHS---HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE 179 (331)
T ss_dssp ECCSEEHHHHHHHS-TTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred ecCCcchHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHH---CCEEccCcChheEEEcCCCcEEEEeCCCceeecCCcc
Confidence 99999998887654 3569999999999999999999995 4999999999999999999999999999986654322
Q ss_pred eeeeeeecccCccCccccccC-CCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHH---------HHHHHhccccc
Q 007668 463 HITTIVAGTFGYLAPEYMQSG-RATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVG---------WLNFLISEDRQ 532 (594)
Q Consensus 463 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~---------~~~~~~~~~~~ 532 (594)
......||+.|+|||++.+. .++.++||||+|+++|||++|+.||............. +..........
T Consensus 180 -~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (331)
T 4aaa_A 180 -VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVF 258 (331)
T ss_dssp -----CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGG
T ss_pred -ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhcccc
Confidence 22345689999999998875 78999999999999999999999997643221110000 00000000000
Q ss_pred ccccCCCCCC------CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 533 REIIDPNCEG------VQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 533 ~~~~~~~~~~------~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
.....+.... .....+..+.+++.+||+.||++|||++|+++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 259 AGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp TTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred ccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 1111111110 11133567999999999999999999999875
No 197
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=1.7e-39 Score=324.45 Aligned_cols=251 Identities=23% Similarity=0.368 Sum_probs=186.5
Q ss_pred hcCCCccceeeeecceEEEEEEe-cCCcEEEEEeecccc--hhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEEE
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAM-DDGNVFALKRIDKLN--EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIY 382 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ 382 (594)
.++|+..+.||+|+||.||++.. .+++.||+|++.... ....+.+.++...++.++||||+++++++.+....++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 46788899999999999999976 478999999997532 222334555555688899999999999999999999999
Q ss_pred EccCCCchhhhhhh---cCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeeccccccccc
Q 007668 383 DFLPGGSLDEALHE---RSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLED 459 (594)
Q Consensus 383 e~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~ 459 (594)
||++ |+|.+++.. ....+++..+..++.|++.||+|||+. .+|+||||||+||+++.++.+||+|||++.....
T Consensus 86 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 162 (290)
T 3fme_A 86 ELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKMCDFGISGYLVD 162 (290)
T ss_dssp ECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH--SCCCCCCCSGGGCEECTTCCEEBCCC--------
T ss_pred ehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeecCCcccccc
Confidence 9996 588887753 456799999999999999999999952 2999999999999999999999999999987654
Q ss_pred CCceeeeeeecccCccCcccc----ccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccc
Q 007668 460 EESHITTIVAGTFGYLAPEYM----QSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREI 535 (594)
Q Consensus 460 ~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 535 (594)
... .....||+.|+|||.+ .+..++.++||||+|+++|||++|+.||...... .. .......... ..
T Consensus 163 ~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~-~~~~~~~~~~-~~- 233 (290)
T 3fme_A 163 DVA--KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP----FQ-QLKQVVEEPS-PQ- 233 (290)
T ss_dssp ---------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCH----HH-HHHHHHHSCC-CC-
T ss_pred ccc--ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCch----HH-HHHHHhccCC-CC-
Confidence 322 2334689999999996 5567899999999999999999999999752111 11 1111111110 00
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 536 IDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 536 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
......+..+.+++.+||+.||++|||++|+++
T Consensus 234 ------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 234 ------LPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp ------CCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred ------cccccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 011233467899999999999999999999986
No 198
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=1.6e-39 Score=341.61 Aligned_cols=252 Identities=23% Similarity=0.362 Sum_probs=190.3
Q ss_pred HhcCCCccceeeeecceEEEEEEec-CCcEEEEEeecccc--------hhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCC
Q 007668 305 KLETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLN--------EGFDRFFERELEILGSIKHRYLVNLRGYCNSP 375 (594)
Q Consensus 305 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~ 375 (594)
..++|...+.||+|+||.||+|... +++.||||++.... ......+.+|++++++++||||+++++++..
T Consensus 133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~- 211 (419)
T 3i6u_A 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA- 211 (419)
T ss_dssp HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-
T ss_pred hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-
Confidence 3568899999999999999999765 57999999986532 1112347899999999999999999999865
Q ss_pred CceEEEEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCC---CcEEEeecc
Q 007668 376 TSKLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGN---LEARVSDFG 452 (594)
Q Consensus 376 ~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~---~~~~l~Dfg 452 (594)
...++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.+ ..+||+|||
T Consensus 212 ~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl~DFG 287 (419)
T 3i6u_A 212 EDYYIVLELMEGGELFDKVVG-NKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFG 287 (419)
T ss_dssp SEEEEEEECCTTCBGGGGTSS-SCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEECCSS
T ss_pred CceEEEEEcCCCCcHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEEeecc
Confidence 457999999999999999875 35699999999999999999999954 99999999999999754 459999999
Q ss_pred cccccccCCceeeeeeecccCccCcccccc---CCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcc
Q 007668 453 LAKLLEDEESHITTIVAGTFGYLAPEYMQS---GRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISE 529 (594)
Q Consensus 453 l~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 529 (594)
+++...... ......||+.|+|||++.+ ..++.++||||||+++|||++|+.||....... ..... ...
T Consensus 288 ~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~--~~~~~----i~~ 359 (419)
T 3i6u_A 288 HSKILGETS--LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV--SLKDQ----ITS 359 (419)
T ss_dssp TTTSCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSC--CHHHH----HHT
T ss_pred cceecCCCc--cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchH--HHHHH----Hhc
Confidence 998765432 2344679999999999853 578889999999999999999999997532211 11110 000
Q ss_pred cccccccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 530 DRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 530 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
.... ..+......+..+.+++.+||+.||++|||++|+++
T Consensus 360 ~~~~-----~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 360 GKYN-----FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp TCCC-----CCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred CCCC-----CCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 0000 000001123467899999999999999999999886
No 199
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=8.9e-39 Score=337.41 Aligned_cols=199 Identities=25% Similarity=0.365 Sum_probs=166.3
Q ss_pred hcCCCccceeeeecceEEEEEEec-CCcEEEEEeeccc--chhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCC-----Cc
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKL--NEGFDRFFERELEILGSIKHRYLVNLRGYCNSP-----TS 377 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-----~~ 377 (594)
.++|...+.||+|+||.||+|... +++.||||++... .....+.+.+|++++++++||||+++++++... ..
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 357888999999999999999765 5788999999753 333456789999999999999999999998665 56
Q ss_pred eEEEEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeeccccccc
Q 007668 378 KLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLL 457 (594)
Q Consensus 378 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~ 457 (594)
.++||||++ |+|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 105 ~~lv~e~~~-~~L~~~~~~-~~~l~~~~~~~i~~qil~aL~~LH~---~givHrDlkp~NILl~~~~~~kL~DFGla~~~ 179 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKT-PIFLTEEHIKTILYNLLLGENFIHE---SGIIHRDLKPANCLLNQDCSVKVCDFGLARTI 179 (432)
T ss_dssp EEEEEECCS-EEHHHHHHS-SCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEecCC-cCHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCHHHeEECCCCCEEEccCCCcccc
Confidence 899999985 699999975 4569999999999999999999995 49999999999999999999999999999876
Q ss_pred ccCCce---------------------eeeeeecccCccCcccc-ccCCCCccchhhhHHHHHHHHHhCCCCCC
Q 007668 458 EDEESH---------------------ITTIVAGTFGYLAPEYM-QSGRATEKTDVYSFGVLVLEVLSGKRPTD 509 (594)
Q Consensus 458 ~~~~~~---------------------~~~~~~gt~~y~aPE~~-~~~~~~~~~Dv~s~G~vl~elltg~~p~~ 509 (594)
...... ......||+.|+|||++ .+..++.++||||+||++|||++|..|+.
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 180 NSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp -------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred cccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 543211 12456799999999986 56679999999999999999998666554
No 200
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=2.2e-38 Score=326.94 Aligned_cols=254 Identities=26% Similarity=0.423 Sum_probs=203.3
Q ss_pred HHHhcCCCccceeeeecceEEEEEEec-CCcEEEEEeecccc--------hhhHHHHHHHHHHHhhC-CCCeeeeeeeEE
Q 007668 303 IKKLETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLN--------EGFDRFFERELEILGSI-KHRYLVNLRGYC 372 (594)
Q Consensus 303 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l-~h~niv~l~g~~ 372 (594)
....++|...+.||+|+||.||+|... +|+.||||++.... ....+.+.+|+.++.++ +||||+++++++
T Consensus 90 ~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~ 169 (365)
T 2y7j_A 90 KEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSY 169 (365)
T ss_dssp HHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred hhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEE
Confidence 334567899999999999999999875 69999999986432 12245688999999999 799999999999
Q ss_pred eCCCceEEEEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecc
Q 007668 373 NSPTSKLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFG 452 (594)
Q Consensus 373 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfg 452 (594)
......++||||+++++|.+++... ..+++..+..++.||+.||.|||+. +|+||||||+||+++.++.++|+|||
T Consensus 170 ~~~~~~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ikl~DfG 245 (365)
T 2y7j_A 170 ESSSFMFLVFDLMRKGELFDYLTEK-VALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFG 245 (365)
T ss_dssp EBSSEEEEEECCCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCT
T ss_pred eeCCEEEEEEEeCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEEecC
Confidence 9999999999999999999999753 5699999999999999999999964 99999999999999999999999999
Q ss_pred cccccccCCceeeeeeecccCccCcccccc------CCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHH
Q 007668 453 LAKLLEDEESHITTIVAGTFGYLAPEYMQS------GRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFL 526 (594)
Q Consensus 453 l~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 526 (594)
++........ .....||+.|+|||++.+ ..++.++||||||+++|||++|+.||...... ......
T Consensus 246 ~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~------~~~~~i 317 (365)
T 2y7j_A 246 FSCHLEPGEK--LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQI------LMLRMI 317 (365)
T ss_dssp TCEECCTTCC--BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHH
T ss_pred cccccCCCcc--cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHH------HHHHHH
Confidence 9987654332 234578999999999863 35788999999999999999999999753221 111111
Q ss_pred hcccccccccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 527 ISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
.... .. ...+.+ ...+..+.+++.+||+.||++|||++|+++
T Consensus 318 ~~~~-~~-~~~~~~----~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 318 MEGQ-YQ-FSSPEW----DDRSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp HHTC-CC-CCHHHH----SSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HhCC-CC-CCCccc----ccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1110 00 000000 112356899999999999999999999986
No 201
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=1.3e-38 Score=323.90 Aligned_cols=252 Identities=21% Similarity=0.305 Sum_probs=198.9
Q ss_pred hcCCCcc-ceeeeecceEEEEEEec-CCcEEEEEeecccc--hhhHHHHHHHHHHHhhCC-CCeeeeeeeEEeCCCceEE
Q 007668 306 LETLDDD-HIIGSGGFGTVYKLAMD-DGNVFALKRIDKLN--EGFDRFFERELEILGSIK-HRYLVNLRGYCNSPTSKLL 380 (594)
Q Consensus 306 ~~~~~~~-~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~l 380 (594)
.+.|... +.||+|+||.||+|... +++.||+|++.... ......+.+|+.++..++ ||||+++++++.+....++
T Consensus 27 ~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~l 106 (327)
T 3lm5_A 27 NNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIIL 106 (327)
T ss_dssp HHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEE
Confidence 3455555 88999999999999766 58999999987532 233577899999999995 6999999999999999999
Q ss_pred EEEccCCCchhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecC---CCcEEEeecccccc
Q 007668 381 IYDFLPGGSLDEALHER-SEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDG---NLEARVSDFGLAKL 456 (594)
Q Consensus 381 v~e~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~---~~~~~l~Dfgl~~~ 456 (594)
||||+++|+|.+++... ...+++..+..++.|++.||+|||+ .+|+||||||+||+++. ++.+||+|||++..
T Consensus 107 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~---~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~ 183 (327)
T 3lm5_A 107 ILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQ---NNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRK 183 (327)
T ss_dssp EEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESCBTTBCCEEECCGGGCEE
T ss_pred EEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHH---CCeecCcCChHHEEEecCCCCCcEEEeeCccccc
Confidence 99999999999998643 4569999999999999999999995 49999999999999987 78999999999987
Q ss_pred cccCCceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhccccccccc
Q 007668 457 LEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREII 536 (594)
Q Consensus 457 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 536 (594)
...... .....||+.|+|||++.+..++.++||||||+++|||++|+.||........ ...... .. ....
T Consensus 184 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~------~~~i~~-~~-~~~~ 253 (327)
T 3lm5_A 184 IGHACE--LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQET------YLNISQ-VN-VDYS 253 (327)
T ss_dssp C-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH------HHHHHH-TC-CCCC
T ss_pred cCCccc--cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHH------HHHHHh-cc-cccC
Confidence 654322 2345689999999999999999999999999999999999999976432211 000000 00 0000
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 537 DPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 537 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
.......+..+.+++.+||+.||++|||++|+++
T Consensus 254 ----~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~ 287 (327)
T 3lm5_A 254 ----EETFSSVSQLATDFIQSLLVKNPEKRPTAEICLS 287 (327)
T ss_dssp ----TTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ----chhhcccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence 1112234467899999999999999999999875
No 202
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=2.1e-39 Score=332.65 Aligned_cols=258 Identities=21% Similarity=0.340 Sum_probs=203.5
Q ss_pred hcCCCccceeeeecceEEEEEEecCCcEEEEEeecccchhh-----------------HHHHHHHHHHHhhCCCCeeeee
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGF-----------------DRFFERELEILGSIKHRYLVNL 368 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-----------------~~~~~~E~~~l~~l~h~niv~l 368 (594)
.++|...+.||+|+||.||+|.. +++.||+|++....... .+.+.+|++++.+++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 35788899999999999999988 89999999987532211 1789999999999999999999
Q ss_pred eeEEeCCCceEEEEEccCCCchhhh------hhhc-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEec
Q 007668 369 RGYCNSPTSKLLIYDFLPGGSLDEA------LHER-SEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLD 441 (594)
Q Consensus 369 ~g~~~~~~~~~lv~e~~~~gsL~~~------l~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~ 441 (594)
++++.+....++||||+++|+|.++ +... ...+++..+..++.||+.||+|||+ ..+|+||||||+||+++
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~--~~~i~H~dl~p~Nil~~ 186 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMD 186 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHH--TSCEECCCCCGGGEEEC
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhc--cCCEeecCCChHhEEEc
Confidence 9999999999999999999999998 5542 4669999999999999999999996 15999999999999999
Q ss_pred CCCcEEEeecccccccccCCceeeeeeecccCccCccccccC-CCCc-cchhhhHHHHHHHHHhCCCCCCcchhcccchH
Q 007668 442 GNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSG-RATE-KTDVYSFGVLVLEVLSGKRPTDASFIEKGLNI 519 (594)
Q Consensus 442 ~~~~~~l~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~ 519 (594)
.++.++|+|||++...... ......|++.|+|||.+.+. .++. ++||||||+++|||++|+.||......
T Consensus 187 ~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----- 258 (348)
T 2pml_X 187 KNGRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL----- 258 (348)
T ss_dssp TTSCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS-----
T ss_pred CCCcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH-----
Confidence 9999999999999876443 23445689999999999877 5666 999999999999999999999764321
Q ss_pred HHHHHHHhccccccc-----ccCCC----CCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 520 VGWLNFLISEDRQRE-----IIDPN----CEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 520 ~~~~~~~~~~~~~~~-----~~~~~----~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
............... ...+. ........+..+.+++.+||+.||++|||++|+++
T Consensus 259 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 259 VELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp HHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 111111111100000 00000 00011334567899999999999999999999986
No 203
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=6.6e-39 Score=343.90 Aligned_cols=250 Identities=25% Similarity=0.358 Sum_probs=201.7
Q ss_pred hcCCCccceeeeecceEEEEEEec-CCcEEEEEeeccc--chhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEEE
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKL--NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIY 382 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ 382 (594)
.++|...+.||+|+||+||++... +++.||||++... .......+.+|++++++++||||+++++++.+....++|+
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 100 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence 457888999999999999999775 6899999998642 2234567899999999999999999999999999999999
Q ss_pred EccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEec---CCCcEEEeeccccccccc
Q 007668 383 DFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLD---GNLEARVSDFGLAKLLED 459 (594)
Q Consensus 383 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~---~~~~~~l~Dfgl~~~~~~ 459 (594)
||+++|+|.+.+... ..+++..+..++.||+.||.|||+ .+|+||||||+|||++ .++.+||+|||++.....
T Consensus 101 e~~~~~~L~~~~~~~-~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 176 (486)
T 3mwu_A 101 ELYTGGELFDEIIKR-KRFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176 (486)
T ss_dssp CCCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCC
T ss_pred EcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCC
Confidence 999999999998764 569999999999999999999995 4999999999999995 456799999999987654
Q ss_pred CCceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCCC
Q 007668 460 EESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPN 539 (594)
Q Consensus 460 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (594)
.. ......||+.|+|||++.+ .++.++||||+|+++|+|++|+.||....... .......... . ..
T Consensus 177 ~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~------~~~~i~~~~~-~----~~ 242 (486)
T 3mwu_A 177 NT--KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD------ILKRVETGKY-A----FD 242 (486)
T ss_dssp C------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHTCC-C----SC
T ss_pred CC--ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHhCCC-C----CC
Confidence 32 2334569999999999875 59999999999999999999999997643221 1111111110 0 00
Q ss_pred CCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 540 CEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 540 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
. ......+..+.+++.+||+.||++|||+.|+++
T Consensus 243 ~-~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~ 276 (486)
T 3mwu_A 243 L-PQWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (486)
T ss_dssp S-GGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred C-cccCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 0 011233467899999999999999999999987
No 204
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=1.4e-39 Score=329.68 Aligned_cols=258 Identities=26% Similarity=0.395 Sum_probs=200.1
Q ss_pred HhcCCCccceeeeecceEEEEEEecCCcEEEEEeeccc--chhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEEE
Q 007668 305 KLETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKL--NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIY 382 (594)
Q Consensus 305 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ 382 (594)
..++|...+.||+|+||.||+|...+ .+|+|+++.. .....+.+.+|+.++++++||||+++++++.+....++|+
T Consensus 31 ~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~ 108 (319)
T 2y4i_B 31 PFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIIT 108 (319)
T ss_dssp CCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEEC
T ss_pred CHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEe
Confidence 35678889999999999999998764 4899988643 2223356788999999999999999999999999999999
Q ss_pred EccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccCCc
Q 007668 383 DFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEES 462 (594)
Q Consensus 383 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~~ 462 (594)
||+++++|.+++......+++..+..++.||+.||+|||+. +++||||||+||+++ ++.++|+|||++........
T Consensus 109 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~ 184 (319)
T 2y4i_B 109 SLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQA 184 (319)
T ss_dssp BCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC-------
T ss_pred ecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCccccccccc
Confidence 99999999999987666799999999999999999999964 999999999999998 67999999999876532211
Q ss_pred ----eeeeeeecccCccCcccccc---------CCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcc
Q 007668 463 ----HITTIVAGTFGYLAPEYMQS---------GRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISE 529 (594)
Q Consensus 463 ----~~~~~~~gt~~y~aPE~~~~---------~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 529 (594)
.......|++.|+|||.+.+ ..++.++||||||+++|||++|+.||....... ..... ..
T Consensus 185 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~------~~~~~-~~ 257 (319)
T 2y4i_B 185 GRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEA------IIWQM-GT 257 (319)
T ss_dssp ---CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHH------HHHHH-HT
T ss_pred cccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHh-cc
Confidence 11233458999999999864 457899999999999999999999997643221 11111 11
Q ss_pred cccccccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccCC
Q 007668 530 DRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVMT 582 (594)
Q Consensus 530 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~~~ 582 (594)
... +... ....+..+.+++.+||+.||++|||+.++++.|++....
T Consensus 258 ~~~-----~~~~--~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~ 303 (319)
T 2y4i_B 258 GMK-----PNLS--QIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKR 303 (319)
T ss_dssp TCC-----CCCC--CSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC---
T ss_pred CCC-----CCCC--cCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHh
Confidence 111 1110 111234688999999999999999999999999987654
No 205
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=3.5e-39 Score=323.75 Aligned_cols=262 Identities=23% Similarity=0.352 Sum_probs=200.4
Q ss_pred hcCCCccceeeeecceEEEEEEec-CCcEEEEEeecccc--hhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEEE
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLN--EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIY 382 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ 382 (594)
.++|+..+.||+|+||.||+|... +|+.||+|++.... ....+.+.+|++++++++||||+++++++...+..++||
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (299)
T 2r3i_A 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVF 81 (299)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cchhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEE
Confidence 357888899999999999999876 68999999986532 223467889999999999999999999999999999999
Q ss_pred EccCCCchhhhhhhcC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccCC
Q 007668 383 DFLPGGSLDEALHERS-EQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEE 461 (594)
Q Consensus 383 e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~ 461 (594)
||++ ++|.+++.... ..+++..+..++.||+.||+|||+. +++||||||+||+++.++.++|+|||++.......
T Consensus 82 e~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~ 157 (299)
T 2r3i_A 82 EFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 157 (299)
T ss_dssp ECCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCS
T ss_pred Eccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhccCCc
Confidence 9997 69999987543 5689999999999999999999954 99999999999999999999999999998654322
Q ss_pred ceeeeeeecccCccCccccccCC-CCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccc-------cc
Q 007668 462 SHITTIVAGTFGYLAPEYMQSGR-ATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDR-------QR 533 (594)
Q Consensus 462 ~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-------~~ 533 (594)
. ......||+.|+|||.+.+.. ++.++||||||+++|||++|+.||......+. ........-.... ..
T Consensus 158 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 234 (299)
T 2r3i_A 158 R-TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ--LFRIFRTLGTPDEVVWPGVTSM 234 (299)
T ss_dssp B-CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH--HHHHHHHHCCCCTTTSTTGGGS
T ss_pred c-ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHH--HHHHHHHhCCCchhhhhHhhcC
Confidence 1 122345799999999988765 79999999999999999999999976432211 1111111000000 00
Q ss_pred cccCCCCCC--------CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 534 EIIDPNCEG--------VQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 534 ~~~~~~~~~--------~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
....+..+. .....+..+.+++.+||+.||++|||++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 235 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp TTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 000111110 01123467899999999999999999999987
No 206
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=320.85 Aligned_cols=254 Identities=18% Similarity=0.294 Sum_probs=199.6
Q ss_pred hcCCCccceeeeecceEEEEEEec-CCcEEEEEeecccc----hhhHHHHHHHHHHHhhCCCCeeeeeeeEE--eCCCce
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLN----EGFDRFFERELEILGSIKHRYLVNLRGYC--NSPTSK 378 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~g~~--~~~~~~ 378 (594)
..+|...+.||+|+||.||++... +++.||+|.+.... ....+.+.+|++++++++||||+++++++ .+....
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 468999999999999999999874 68899999997532 23457799999999999999999999998 445678
Q ss_pred EEEEEccCCCchhhhhhh-cCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeeccccccc
Q 007668 379 LLIYDFLPGGSLDEALHE-RSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLL 457 (594)
Q Consensus 379 ~lv~e~~~~gsL~~~l~~-~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~ 457 (594)
++||||++++ |.+++.. ....+++..+..++.||+.||+|||+. +|+||||||+||+++.++.++|+|||++...
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~ 159 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEAL 159 (305)
T ss_dssp EEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeecccccccc
Confidence 9999999876 7676654 345699999999999999999999954 9999999999999999999999999999876
Q ss_pred ccCC-ceeeeeeecccCccCccccccCCC--CccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhccccccc
Q 007668 458 EDEE-SHITTIVAGTFGYLAPEYMQSGRA--TEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQRE 534 (594)
Q Consensus 458 ~~~~-~~~~~~~~gt~~y~aPE~~~~~~~--~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 (594)
.... ........||+.|+|||++.+... +.++||||||+++|||++|+.||...... ......... ..
T Consensus 160 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~~i~~~-~~-- 230 (305)
T 2wtk_C 160 HPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIY------KLFENIGKG-SY-- 230 (305)
T ss_dssp CTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHH------HHHHHHHHC-CC--
T ss_pred CccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHH------HHHHHHhcC-CC--
Confidence 5322 222344568999999999876543 78999999999999999999999764221 111111111 00
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHhcc
Q 007668 535 IIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ--ILESE 579 (594)
Q Consensus 535 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~--~L~~~ 579 (594)
..+......+.+++.+||+.||++|||++|+++ .+++.
T Consensus 231 -------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~ 270 (305)
T 2wtk_C 231 -------AIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKK 270 (305)
T ss_dssp -------CCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHSHHHHSC
T ss_pred -------CCCCccCHHHHHHHHHHccCChhhCCCHHHHhcCcccccC
Confidence 011223467889999999999999999999996 45543
No 207
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=8.1e-39 Score=343.77 Aligned_cols=250 Identities=23% Similarity=0.365 Sum_probs=197.9
Q ss_pred hcCCCccceeeeecceEEEEEEec-CCcEEEEEeecccc--hhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEEE
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLN--EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIY 382 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ 382 (594)
.++|...+.||+|+||.||+|... ++..||+|++.... ......+.+|+++++.++||||+++++++.+....++||
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 115 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM 115 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 346888899999999999999875 68899999987532 333567899999999999999999999999999999999
Q ss_pred EccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecC---CCcEEEeeccccccccc
Q 007668 383 DFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDG---NLEARVSDFGLAKLLED 459 (594)
Q Consensus 383 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~---~~~~~l~Dfgl~~~~~~ 459 (594)
||+++|+|.+.+... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++. ++.+||+|||++.....
T Consensus 116 e~~~~g~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~ 191 (494)
T 3lij_A 116 ECYKGGELFDEIIHR-MKFNEVDAAVIIKQVLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFEN 191 (494)
T ss_dssp ECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBT
T ss_pred ecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCC
Confidence 999999999988764 568999999999999999999995 49999999999999975 44599999999987654
Q ss_pred CCceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCCC
Q 007668 460 EESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPN 539 (594)
Q Consensus 460 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (594)
... .....||+.|+|||++. +.++.++||||+||++|+|++|..||....... .......... ....+.
T Consensus 192 ~~~--~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~------~~~~i~~~~~--~~~~~~ 260 (494)
T 3lij_A 192 QKK--MKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQE------ILRKVEKGKY--TFDSPE 260 (494)
T ss_dssp TBC--BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHTCC--CCCSGG
T ss_pred Ccc--ccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHhCCC--CCCchh
Confidence 332 33456999999999886 569999999999999999999999997643221 1111111110 000111
Q ss_pred CCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 540 CEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 540 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
+ ...+..+.+++.+||+.||++|||+.|+++
T Consensus 261 ~----~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 261 W----KNVSEGAKDLIKQMLQFDSQRRISAQQALE 291 (494)
T ss_dssp G----TTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred c----ccCCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence 1 123467899999999999999999999884
No 208
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=1.4e-38 Score=324.08 Aligned_cols=253 Identities=15% Similarity=0.277 Sum_probs=197.3
Q ss_pred cCCCccceeeeecceEEEEEEe-cCCcEEEEEeecccchhhHHHHHHHHHHHhhCC-CCeeeeeeeEEeC--CCceEEEE
Q 007668 307 ETLDDDHIIGSGGFGTVYKLAM-DDGNVFALKRIDKLNEGFDRFFERELEILGSIK-HRYLVNLRGYCNS--PTSKLLIY 382 (594)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~--~~~~~lv~ 382 (594)
++|+..+.||+|+||.||+|.. .+++.||+|++.... .+.+.+|++++.+++ ||||+++++++.+ ....++||
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~ 112 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF 112 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc---hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence 5788889999999999999975 578999999987533 467899999999997 9999999999987 66789999
Q ss_pred EccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCC-cEEEeecccccccccCC
Q 007668 383 DFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNL-EARVSDFGLAKLLEDEE 461 (594)
Q Consensus 383 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~-~~~l~Dfgl~~~~~~~~ 461 (594)
||+++++|.+++.. +++..+..++.||+.||+|||+ .+|+||||||+|||++.++ .+||+|||+++......
T Consensus 113 e~~~~~~l~~~~~~----~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~ 185 (330)
T 3nsz_A 113 EHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ 185 (330)
T ss_dssp ECCCCCCHHHHGGG----CCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTC
T ss_pred eccCchhHHHHHHh----CCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCC
Confidence 99999999999853 8899999999999999999995 4999999999999999766 89999999998765433
Q ss_pred ceeeeeeecccCccCcccccc-CCCCccchhhhHHHHHHHHHhCCCCCCcchhccc--c---------hHHHHHHHHh--
Q 007668 462 SHITTIVAGTFGYLAPEYMQS-GRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKG--L---------NIVGWLNFLI-- 527 (594)
Q Consensus 462 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~--~---------~~~~~~~~~~-- 527 (594)
. .....|+..|+|||.+.+ ..++.++||||||+++|||++|+.||........ . ....+.....
T Consensus 186 ~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 263 (330)
T 3nsz_A 186 E--YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE 263 (330)
T ss_dssp C--CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCC
T ss_pred c--cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccc
Confidence 2 233468999999999877 6789999999999999999999999854221100 0 0000000000
Q ss_pred ---------cc---cccccccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 528 ---------SE---DRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 528 ---------~~---~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
.. ......... ......+..+.+|+.+||+.||++|||++|+++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 264 LDPRFNDILGRHSRKRWERFVHS---ENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp CCTHHHHHHCCCCCCCGGGGCCT---TTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred cccchhhhhhhccccchhhhccc---cccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00 000000000 011224577999999999999999999999986
No 209
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=2e-38 Score=327.40 Aligned_cols=260 Identities=22% Similarity=0.366 Sum_probs=199.8
Q ss_pred hcCCCccceeeeecceEEEEEEec-CCcEEEEEeecccc-hhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCC-----Cce
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLN-EGFDRFFERELEILGSIKHRYLVNLRGYCNSP-----TSK 378 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-----~~~ 378 (594)
..+|+..+.||+|+||.||+|... ++..||||++.... ....+.+.+|++++.+++||||+++++++... ...
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 357888999999999999999765 68889999997533 33456789999999999999999999998654 467
Q ss_pred EEEEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccc
Q 007668 379 LLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLE 458 (594)
Q Consensus 379 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~ 458 (594)
++|+||++ |+|.+++.. ..+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||++....
T Consensus 106 ~iv~e~~~-~~L~~~l~~--~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~ 179 (364)
T 3qyz_A 106 YIVQDLME-TDLYKLLKT--QHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 179 (364)
T ss_dssp EEEEECCS-EEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEcccC-cCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCChHhEEECCCCCEEEEeCcceEecC
Confidence 99999996 699999875 459999999999999999999995 499999999999999999999999999998765
Q ss_pred cCCcee--eeeeecccCccCcccccc-CCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccc----
Q 007668 459 DEESHI--TTIVAGTFGYLAPEYMQS-GRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDR---- 531 (594)
Q Consensus 459 ~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~---- 531 (594)
...... .....||+.|+|||++.+ ..++.++||||+|+++|||++|+.||......+..... . .......
T Consensus 180 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i--~-~~~~~~~~~~~ 256 (364)
T 3qyz_A 180 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI--L-GILGSPSQEDL 256 (364)
T ss_dssp GGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHH--H-HHHCSCCHHHH
T ss_pred CCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHH--H-HHhCCCCHHHH
Confidence 433221 234579999999998654 55899999999999999999999999764332211110 0 0000000
Q ss_pred -----------cccccCCCC---CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 532 -----------QREIIDPNC---EGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 532 -----------~~~~~~~~~---~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
......+.. ..........+.+|+.+||+.||++|||++|+++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 257 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp HTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000000000 0011223467899999999999999999999986
No 210
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=4.7e-39 Score=356.47 Aligned_cols=248 Identities=21% Similarity=0.329 Sum_probs=204.5
Q ss_pred HhcCCCccceeeeecceEEEEEEec-CCcEEEEEeeccc---chhhHHHHHHHHHHHhhC-CCCeeeeeeeEEeCCCceE
Q 007668 305 KLETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKL---NEGFDRFFERELEILGSI-KHRYLVNLRGYCNSPTSKL 379 (594)
Q Consensus 305 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~ 379 (594)
..++|+..+.||+|+||.||+|... +++.||||++++. .....+.+..|.+++..+ +||+|+++++++.+....+
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 4568889999999999999999765 5788999999753 223346678899999887 7999999999999999999
Q ss_pred EEEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeeccccccccc
Q 007668 380 LIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLED 459 (594)
Q Consensus 380 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~ 459 (594)
+||||+++|+|.++++.. ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++++||+|||+++....
T Consensus 419 lV~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~---~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~ 494 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQV-GRFKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 494 (674)
T ss_dssp EEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHH---TSEECCCCCSTTEEECSSSCEEECCCTTCEECCC
T ss_pred EEEeCcCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh---CCeEeccCChhhEEEcCCCcEEEeecceeecccc
Confidence 999999999999999864 569999999999999999999995 4999999999999999999999999999986443
Q ss_pred CCceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCCC
Q 007668 460 EESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPN 539 (594)
Q Consensus 460 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (594)
... ......||+.|+|||++.+..++.++||||||+++|||++|+.||...... ..........
T Consensus 495 ~~~-~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~------~~~~~i~~~~--------- 558 (674)
T 3pfq_A 495 DGV-TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED------ELFQSIMEHN--------- 558 (674)
T ss_dssp TTC-CBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHSSC---------
T ss_pred CCc-ccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHH------HHHHHHHhCC---------
Confidence 322 244567999999999999999999999999999999999999999764322 1111111111
Q ss_pred CCCCCHHHHHHHHHHHHHcccCCCCCCCCH-----HHHH
Q 007668 540 CEGVQSESLDALLAVATQCVSSSPDDRPTM-----HRVV 573 (594)
Q Consensus 540 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~-----~ev~ 573 (594)
...+...+.++.+|+.+||+.||++||++ +||+
T Consensus 559 -~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~ 596 (674)
T 3pfq_A 559 -VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIK 596 (674)
T ss_dssp -CCCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHH
T ss_pred -CCCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHh
Confidence 01223345779999999999999999997 6665
No 211
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=1.5e-39 Score=335.49 Aligned_cols=255 Identities=25% Similarity=0.359 Sum_probs=181.6
Q ss_pred cCCCccceeeeecceEEEEEEe-cCCcEEEEEeeccc--chhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCC------Cc
Q 007668 307 ETLDDDHIIGSGGFGTVYKLAM-DDGNVFALKRIDKL--NEGFDRFFERELEILGSIKHRYLVNLRGYCNSP------TS 377 (594)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~------~~ 377 (594)
++|...+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|+++++.++||||+++++++... ..
T Consensus 29 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~ 108 (367)
T 2fst_X 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND 108 (367)
T ss_dssp TTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred CceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCe
Confidence 5788889999999999999975 46899999998653 333456788999999999999999999998654 56
Q ss_pred eEEEEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeeccccccc
Q 007668 378 KLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLL 457 (594)
Q Consensus 378 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~ 457 (594)
.++|+||+ +++|.+++.. ..+++..+..++.||++||+|||+ .+|+||||||+||+++.++.+||+|||+++..
T Consensus 109 ~~lv~e~~-~~~L~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~ 182 (367)
T 2fst_X 109 VYLVTHLM-GADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT 182 (367)
T ss_dssp CEEEEECC-CEECC-------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECC-------
T ss_pred EEEEeccc-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHhhEEECCCCCEEEeeccccccc
Confidence 79999999 7899999865 569999999999999999999995 49999999999999999999999999999865
Q ss_pred ccCCceeeeeeecccCccCcccccc-CCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcc-------
Q 007668 458 EDEESHITTIVAGTFGYLAPEYMQS-GRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISE------- 529 (594)
Q Consensus 458 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~------- 529 (594)
... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||............ ......
T Consensus 183 ~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i---~~~~g~p~~~~~~ 255 (367)
T 2fst_X 183 ADE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI---LRLVGTPGAELLK 255 (367)
T ss_dssp ------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH---HHHHCSCCHHHHT
T ss_pred ccc----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH---HHHhCCCCHHHHH
Confidence 432 234578999999999876 67899999999999999999999999764322111100 000000
Q ss_pred ----cccccccC--CCCCC-----CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 530 ----DRQREIID--PNCEG-----VQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 530 ----~~~~~~~~--~~~~~-----~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
......+. +..+. ........+.+|+.+||+.||++|||++|+++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~ 311 (367)
T 2fst_X 256 KISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 311 (367)
T ss_dssp TCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence 00000000 00000 11123466899999999999999999999986
No 212
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=4.4e-39 Score=345.27 Aligned_cols=250 Identities=24% Similarity=0.363 Sum_probs=203.5
Q ss_pred hcCCCccceeeeecceEEEEEEec-CCcEEEEEeeccc---chhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEE
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKL---NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLI 381 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv 381 (594)
.++|...+.||+|+||.||++... +++.||||++... .....+.+.+|++++++++||||+++++++.+....++|
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 104 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV 104 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 356888899999999999999876 7899999998643 233467799999999999999999999999999999999
Q ss_pred EEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEe---cCCCcEEEeecccccccc
Q 007668 382 YDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILL---DGNLEARVSDFGLAKLLE 458 (594)
Q Consensus 382 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll---~~~~~~~l~Dfgl~~~~~ 458 (594)
+||+++|+|.+.+..+ ..+++..+..++.||+.||+|||+. +|+||||||+|||+ +.++.+||+|||++....
T Consensus 105 ~e~~~~~~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 180 (484)
T 3nyv_A 105 GEVYTGGELFDEIISR-KRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 180 (484)
T ss_dssp ECCCCSCBHHHHHHTC-SCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBC
T ss_pred EecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcc
Confidence 9999999999999763 5699999999999999999999954 99999999999999 567899999999998765
Q ss_pred cCCceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCC
Q 007668 459 DEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDP 538 (594)
Q Consensus 459 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 538 (594)
.... .....||+.|+|||++.+ .++.++||||+|+++|+|++|+.||....... ......... . ..
T Consensus 181 ~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~------~~~~i~~~~-~----~~ 246 (484)
T 3nyv_A 181 ASKK--MKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYD------ILKKVEKGK-Y----TF 246 (484)
T ss_dssp CCCS--HHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHCC-C----CC
T ss_pred cccc--cccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHH------HHHHHHcCC-C----CC
Confidence 4332 233569999999999875 79999999999999999999999997643221 111111111 0 00
Q ss_pred CCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 539 NCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 539 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
.. ......+..+.+++.+||+.||++|||++|+++
T Consensus 247 ~~-~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 247 EL-PQWKKVSESAKDLIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp CS-GGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CC-cccccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence 00 011234467899999999999999999999985
No 213
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.6e-38 Score=321.52 Aligned_cols=251 Identities=23% Similarity=0.392 Sum_probs=194.9
Q ss_pred HhcCCCccceeeeecceEEEEEEec-CCcEEEEEeecccchhhHHHHHHHHHHHhhC-CCCeeeeeeeEEeC------CC
Q 007668 305 KLETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNEGFDRFFERELEILGSI-KHRYLVNLRGYCNS------PT 376 (594)
Q Consensus 305 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~------~~ 376 (594)
..++|...+.||+|+||.||+|... +++.||+|++..... ..+.+.+|+.++.++ +||||+++++++.. ..
T Consensus 22 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~ 100 (326)
T 2x7f_A 22 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD-EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD 100 (326)
T ss_dssp CTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS-TTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCC
T ss_pred CCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc-cHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccc
Confidence 4567888999999999999999874 689999999875432 356788999999998 79999999999866 46
Q ss_pred ceEEEEEccCCCchhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeeccccc
Q 007668 377 SKLLIYDFLPGGSLDEALHER-SEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAK 455 (594)
Q Consensus 377 ~~~lv~e~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~ 455 (594)
..++||||+++|+|.+++... ...+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.++|+|||++.
T Consensus 101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~ 177 (326)
T 2x7f_A 101 QLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQ---HKVIHRDIKGQNVLLTENAEVKLVDFGVSA 177 (326)
T ss_dssp EEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTCCEEECCCTTTC
T ss_pred eEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCcHHHEEEcCCCCEEEeeCcCce
Confidence 789999999999999999864 3569999999999999999999995 499999999999999999999999999998
Q ss_pred ccccCCceeeeeeecccCccCccccc-----cCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhccc
Q 007668 456 LLEDEESHITTIVAGTFGYLAPEYMQ-----SGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISED 530 (594)
Q Consensus 456 ~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 530 (594)
....... ......|++.|+|||++. +..++.++||||||+++|+|++|+.||........ .. .....
T Consensus 178 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~------~~-~~~~~ 249 (326)
T 2x7f_A 178 QLDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRA------LF-LIPRN 249 (326)
T ss_dssp --------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHH------HH-HHHHS
T ss_pred ecCcCcc-ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHH------HH-HhhcC
Confidence 6643221 223456899999999986 56789999999999999999999999865432111 00 11111
Q ss_pred ccccccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 531 RQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 531 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
...... ....+..+.+++.+||+.||++|||++++++
T Consensus 250 ~~~~~~-------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 250 PAPRLK-------SKKWSKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp CCCCCS-------CSCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred ccccCC-------ccccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 111111 1223467899999999999999999999986
No 214
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=1.9e-38 Score=318.60 Aligned_cols=251 Identities=25% Similarity=0.417 Sum_probs=193.2
Q ss_pred hcCCCccceeeeecceEEEEEEec-CCcEEEEEeecccchhhHHHHHHHHHHHhhCCCCeeeeeeeEEeC----------
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNS---------- 374 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~---------- 374 (594)
.++|+..+.||+|+||.||+|... +++.||||++... ....+.+.+|++++++++||||+++++++.+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA 83 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence 456888899999999999999864 7899999998653 3345678999999999999999999998754
Q ss_pred ---CCceEEEEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeec
Q 007668 375 ---PTSKLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDF 451 (594)
Q Consensus 375 ---~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Df 451 (594)
....++||||+++|+|.+++......+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+||
T Consensus 84 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~kl~df 160 (303)
T 1zy4_A 84 VKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDF 160 (303)
T ss_dssp --CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCC
T ss_pred cccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEEEeeC
Confidence 3567899999999999999987666789999999999999999999964 9999999999999999999999999
Q ss_pred ccccccccCC-------------ceeeeeeecccCccCccccccC-CCCccchhhhHHHHHHHHHhCCCCCCcchhcccc
Q 007668 452 GLAKLLEDEE-------------SHITTIVAGTFGYLAPEYMQSG-RATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGL 517 (594)
Q Consensus 452 gl~~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~ 517 (594)
|++....... ........||+.|+|||.+.+. .++.++||||||+++|||++ ||......
T Consensus 161 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~--- 234 (303)
T 1zy4_A 161 GLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMER--- 234 (303)
T ss_dssp CCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHH---
T ss_pred cchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhH---
Confidence 9998664321 1122345689999999998764 78999999999999999998 54432111
Q ss_pred hHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 518 NIVGWLNFLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 518 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
.......... ...+.+ ......+..+.+++.+||+.||++|||++++++
T Consensus 235 --~~~~~~~~~~---~~~~~~---~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 235 --VNILKKLRSV---SIEFPP---DFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp --HHHHHHHHST---TCCCCT---TCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred --HHHHHhcccc---ccccCc---cccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 1111111110 011111 123344567899999999999999999999986
No 215
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=7.7e-39 Score=334.49 Aligned_cols=260 Identities=21% Similarity=0.249 Sum_probs=199.1
Q ss_pred cCCCccceeeeecceEEEEEEe-cCCcEEEEEeecccchhhHHHHHHHHHHHhhCC--------CCeeeeeeeEEe----
Q 007668 307 ETLDDDHIIGSGGFGTVYKLAM-DDGNVFALKRIDKLNEGFDRFFERELEILGSIK--------HRYLVNLRGYCN---- 373 (594)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--------h~niv~l~g~~~---- 373 (594)
++|...+.||+|+||.||+|.. .+++.||||++... ....+.+.+|+++++.++ |+||+++++++.
T Consensus 37 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~ 115 (397)
T 1wak_A 37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGV 115 (397)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEET
T ss_pred CeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCC
Confidence 5788899999999999999975 46889999998754 334567889999999885 788999999987
Q ss_pred CCCceEEEEEccCCCchhhhhhh-cCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCC--------
Q 007668 374 SPTSKLLIYDFLPGGSLDEALHE-RSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNL-------- 444 (594)
Q Consensus 374 ~~~~~~lv~e~~~~gsL~~~l~~-~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~-------- 444 (594)
.....++||||+ ++++.+.+.. ....+++..+..++.||+.||+|||++ .+|+||||||+|||++.++
T Consensus 116 ~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~--~givHrDikp~NIll~~~~~~~~~~~~ 192 (397)
T 1wak_A 116 NGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTK--CRIIHTDIKPENILLSVNEQYIRRLAA 192 (397)
T ss_dssp TEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHT--TCEECCCCSGGGEEECCCHHHHHHHHH
T ss_pred CCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHh--CCEecCCCCHHHeeEeccchhhhhhhh
Confidence 566789999999 5566665554 346699999999999999999999952 1899999999999999775
Q ss_pred -----------------------------------------cEEEeecccccccccCCceeeeeeecccCccCccccccC
Q 007668 445 -----------------------------------------EARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSG 483 (594)
Q Consensus 445 -----------------------------------------~~~l~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 483 (594)
.+||+|||++...... .....||+.|+|||++.+.
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----~~~~~gt~~y~aPE~~~~~ 268 (397)
T 1wak_A 193 EATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----FTEDIQTRQYRSLEVLIGS 268 (397)
T ss_dssp HHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC----SCSCCSCGGGCCHHHHHTS
T ss_pred hhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc----CccCCCCCcccCChhhcCC
Confidence 7999999999876543 2234689999999999999
Q ss_pred CCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHH---HHhcc---------cccccccC----------CC--
Q 007668 484 RATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLN---FLISE---------DRQREIID----------PN-- 539 (594)
Q Consensus 484 ~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~---~~~~~---------~~~~~~~~----------~~-- 539 (594)
.++.++|||||||++|||++|+.||................ ..... ......+. ..
T Consensus 269 ~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (397)
T 1wak_A 269 GYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPW 348 (397)
T ss_dssp CCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCC
T ss_pred CCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCc
Confidence 99999999999999999999999997643222111111000 00000 00000000 00
Q ss_pred --------CCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 540 --------CEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 540 --------~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
...........+.+|+.+||+.||++|||++|+++
T Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 349 GLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp CHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred chhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 01134566788999999999999999999999985
No 216
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=3.3e-39 Score=330.18 Aligned_cols=251 Identities=25% Similarity=0.403 Sum_probs=196.9
Q ss_pred hcCCCccceeeeecceEEEEEEe-cCCcEEEEEeeccc-chhhHHHHHHHHHH-HhhCCCCeeeeeeeEEeCCCceEEEE
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAM-DDGNVFALKRIDKL-NEGFDRFFERELEI-LGSIKHRYLVNLRGYCNSPTSKLLIY 382 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~-~~~~~~~~~~E~~~-l~~l~h~niv~l~g~~~~~~~~~lv~ 382 (594)
.++|...+.||+|+||.||+|.. .+|+.||||++... .......+..|..+ ++.++||||+++++++.+....++||
T Consensus 50 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 129 (340)
T 3an0_A 50 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 129 (340)
T ss_dssp SSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEE
T ss_pred hhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEH
Confidence 45677889999999999999986 57899999999753 22334455556655 77889999999999999999999999
Q ss_pred EccCCCchhhhhhh---cCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeeccccccccc
Q 007668 383 DFLPGGSLDEALHE---RSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLED 459 (594)
Q Consensus 383 e~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~ 459 (594)
||+++ +|.+++.. ....+++..+..++.||+.||+|||++ .+|+||||||+||+++.++.+||+|||++.....
T Consensus 130 e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~--~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 206 (340)
T 3an0_A 130 ELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKMCDFGISGYLVD 206 (340)
T ss_dssp CCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHH--TCCCCCSCCSTTEEECSTTCEEECCCSHHHHHSC
T ss_pred HHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeeCCCceeccc
Confidence 99975 99888864 456799999999999999999999952 3899999999999999999999999999986643
Q ss_pred CCceeeeeeecccCccCccccc----cCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccc
Q 007668 460 EESHITTIVAGTFGYLAPEYMQ----SGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREI 535 (594)
Q Consensus 460 ~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 535 (594)
.. ......||+.|+|||++. ...++.++||||||+++|||++|+.||...... ............
T Consensus 207 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~-----~~~~~~~~~~~~---- 275 (340)
T 3an0_A 207 SV--AKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP-----FQQLKQVVEEPS---- 275 (340)
T ss_dssp HH--HHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCH-----HHHHHHHHHSCC----
T ss_pred cc--ccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccch-----HHHHHHHhcCCC----
Confidence 21 122246899999999964 347899999999999999999999999753211 111111111110
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 536 IDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 536 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
+.. .....+..+.+++.+||+.||++|||+.|+++
T Consensus 276 --~~~--~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 276 --PQL--PADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp --CCC--CGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred --CCC--CcccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 000 11234567999999999999999999999986
No 217
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=3e-38 Score=326.86 Aligned_cols=260 Identities=20% Similarity=0.281 Sum_probs=191.1
Q ss_pred hcCCCccceeeeecceEEEEEEec-CCcEEEEEeeccc--chhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCC------
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKL--NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPT------ 376 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~------ 376 (594)
.++|...+.||+|+||.||+|... +++.||||++... .....+.+.+|+.+++.++||||+++++++....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 357888999999999999999765 6889999998753 3344567889999999999999999999997654
Q ss_pred ceEEEEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccc
Q 007668 377 SKLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKL 456 (594)
Q Consensus 377 ~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~ 456 (594)
..++||||++ |+|.+.+. ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 104 ~~~lv~e~~~-~~l~~~~~---~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 176 (371)
T 2xrw_A 104 DVYIVMELMD-ANLCQVIQ---MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART 176 (371)
T ss_dssp EEEEEEECCS-EEHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCCCC---
T ss_pred ceEEEEEcCC-CCHHHHHh---hccCHHHHHHHHHHHHHHHHHHHH---CCeecccCCHHHEEEcCCCCEEEEEeecccc
Confidence 6799999996 57888875 348999999999999999999995 4999999999999999999999999999986
Q ss_pred cccCCceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHH---------HH-----
Q 007668 457 LEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIV---------GW----- 522 (594)
Q Consensus 457 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~---------~~----- 522 (594)
..... ......||+.|+|||++.+..++.++||||+|+++|||++|+.||............ .+
T Consensus 177 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 254 (371)
T 2xrw_A 177 AGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQ 254 (371)
T ss_dssp ---------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSC
T ss_pred ccccc--ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhh
Confidence 54322 233457899999999999999999999999999999999999999764322110000 00
Q ss_pred --HHHHhcccc------c----ccccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 523 --LNFLISEDR------Q----REIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 523 --~~~~~~~~~------~----~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
......... . ....-+............+.+|+.+||+.||++|||++|+++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 318 (371)
T 2xrw_A 255 PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 318 (371)
T ss_dssp HHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred hHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence 000000000 0 000000000011233567999999999999999999999986
No 218
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.9e-38 Score=328.51 Aligned_cols=259 Identities=23% Similarity=0.339 Sum_probs=194.5
Q ss_pred HHhcCCCccceeeeecceEEEEEEe-cCCcEEEEEeecccchhhHHHHHHHHHHHhhCCCCeeeeeeeEEeC--------
Q 007668 304 KKLETLDDDHIIGSGGFGTVYKLAM-DDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNS-------- 374 (594)
Q Consensus 304 ~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-------- 374 (594)
...++|...+.||+|+||.||+|.. .+|+.||||++..... ...+|+++++.++||||+++++++..
T Consensus 4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~ 79 (383)
T 3eb0_A 4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKP 79 (383)
T ss_dssp --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC-------
T ss_pred cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCcccccc
Confidence 3456888999999999999999976 5789999999875433 23479999999999999999999843
Q ss_pred ------------------------------CCceEEEEEccCCCchhhhhhh---cCCCCCHHHHHHHHHHHHHHHHHhh
Q 007668 375 ------------------------------PTSKLLIYDFLPGGSLDEALHE---RSEQLDWDARLNIIMGAAKGLAYLH 421 (594)
Q Consensus 375 ------------------------------~~~~~lv~e~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~~L~~LH 421 (594)
....++||||++ |+|.+.+.. ....+++..+..++.||++||+|||
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH 158 (383)
T 3eb0_A 80 PQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIH 158 (383)
T ss_dssp ------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 233789999997 588877763 3567999999999999999999999
Q ss_pred hcCCCCeeeCCCCCCCeEec-CCCcEEEeecccccccccCCceeeeeeecccCccCccccccC-CCCccchhhhHHHHHH
Q 007668 422 HDCSPRIIHRDIKSSNILLD-GNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSG-RATEKTDVYSFGVLVL 499 (594)
Q Consensus 422 ~~~~~~ivH~Dlk~~NIll~-~~~~~~l~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~ 499 (594)
+.+|+||||||+||+++ .++.+||+|||+++....... .....||+.|+|||.+.+. .++.++||||+|+++|
T Consensus 159 ---~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ 233 (383)
T 3eb0_A 159 ---SLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP--SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFG 233 (383)
T ss_dssp ---TTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC--CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHH
T ss_pred ---HCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC--CcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHH
Confidence 45999999999999998 688999999999987654432 2334689999999998765 4899999999999999
Q ss_pred HHHhCCCCCCcchhcccchHHHHHHHHhcc---------cccccccCCCCCC------CCHHHHHHHHHHHHHcccCCCC
Q 007668 500 EVLSGKRPTDASFIEKGLNIVGWLNFLISE---------DRQREIIDPNCEG------VQSESLDALLAVATQCVSSSPD 564 (594)
Q Consensus 500 elltg~~p~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~------~~~~~~~~l~~l~~~cl~~dP~ 564 (594)
||++|+.||......+.. .......-.. .......-+.... .+...+..+.+|+.+||+.||+
T Consensus 234 ell~g~~pf~~~~~~~~~--~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 311 (383)
T 3eb0_A 234 ELILGKPLFSGETSIDQL--VRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPD 311 (383)
T ss_dssp HHHHSSCSSCCSSHHHHH--HHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGG
T ss_pred HHHhCCCCCCCCChHHHH--HHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChh
Confidence 999999999764322111 1111000000 0000000000000 1223456789999999999999
Q ss_pred CCCCHHHHHH
Q 007668 565 DRPTMHRVVQ 574 (594)
Q Consensus 565 ~RPs~~ev~~ 574 (594)
+|||+.|+++
T Consensus 312 ~R~t~~e~l~ 321 (383)
T 3eb0_A 312 LRINPYEAMA 321 (383)
T ss_dssp GSCCHHHHHT
T ss_pred hCCCHHHHhc
Confidence 9999999984
No 219
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=2.4e-38 Score=333.59 Aligned_cols=197 Identities=23% Similarity=0.295 Sum_probs=170.5
Q ss_pred cCCCccceeeeecceEEEEEEec-CCcEEEEEeecccchhhHHHHHHHHHHHhhC------CCCeeeeeeeEEeCCCceE
Q 007668 307 ETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNEGFDRFFERELEILGSI------KHRYLVNLRGYCNSPTSKL 379 (594)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l------~h~niv~l~g~~~~~~~~~ 379 (594)
.+|+..+.||+|+||.||+|... +++.||||++.... ...+.+.+|++++..+ +|+||+++++++......+
T Consensus 97 ~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~ 175 (429)
T 3kvw_A 97 YRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHIC 175 (429)
T ss_dssp TTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEE
T ss_pred CcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEE
Confidence 46888999999999999999665 58899999997532 3356677888888776 5779999999999999999
Q ss_pred EEEEccCCCchhhhhhhcC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCc--EEEeecccccc
Q 007668 380 LIYDFLPGGSLDEALHERS-EQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLE--ARVSDFGLAKL 456 (594)
Q Consensus 380 lv~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~--~~l~Dfgl~~~ 456 (594)
+||||++ ++|.+++.... ..+++..+..++.||+.||+|||+. +|+||||||+|||++.++. +||+|||+++.
T Consensus 176 lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~ 251 (429)
T 3kvw_A 176 MTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGSSCY 251 (429)
T ss_dssp EEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCCTTCEE
T ss_pred EEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeeccccee
Confidence 9999995 69999987643 4599999999999999999999965 9999999999999998887 99999999976
Q ss_pred cccCCceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcch
Q 007668 457 LEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASF 512 (594)
Q Consensus 457 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~ 512 (594)
.... .....||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 252 ~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~ 303 (429)
T 3kvw_A 252 EHQR----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGED 303 (429)
T ss_dssp TTCC----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cCCc----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCC
Confidence 4432 233568999999999999999999999999999999999999997643
No 220
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=1.7e-38 Score=342.14 Aligned_cols=250 Identities=26% Similarity=0.345 Sum_probs=199.7
Q ss_pred hcCCCccceeeeecceEEEEEEec-CCcEEEEEeecccch-------------hhHHHHHHHHHHHhhCCCCeeeeeeeE
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNE-------------GFDRFFERELEILGSIKHRYLVNLRGY 371 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~h~niv~l~g~ 371 (594)
.++|...+.||+|+||+||+|... +++.||+|++..... ...+.+.+|++++++++||||++++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 467888999999999999999875 578999999875321 235678999999999999999999999
Q ss_pred EeCCCceEEEEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCC---cEEE
Q 007668 372 CNSPTSKLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNL---EARV 448 (594)
Q Consensus 372 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~---~~~l 448 (594)
+.+....++||||+++|+|.+.+... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++ .+||
T Consensus 115 ~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl 190 (504)
T 3q5i_A 115 FEDKKYFYLVTEFYEGGELFEQIINR-HKFDECDAANIMKQILSGICYLHK---HNIVHRDIKPENILLENKNSLLNIKI 190 (504)
T ss_dssp EECSSEEEEEEECCTTCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESSTTCCSSEEE
T ss_pred EEcCCEEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCcHHHEEEecCCCCccEEE
Confidence 99999999999999999999999764 569999999999999999999995 4999999999999998765 6999
Q ss_pred eecccccccccCCceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhc
Q 007668 449 SDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLIS 528 (594)
Q Consensus 449 ~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 528 (594)
+|||++........ .....||+.|+|||++. +.++.++||||+|+++|+|++|..||....... .......
T Consensus 191 ~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~------~~~~i~~ 261 (504)
T 3q5i_A 191 VDFGLSSFFSKDYK--LRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQD------IIKKVEK 261 (504)
T ss_dssp CCCTTCEECCTTSC--BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHH
T ss_pred EECCCCEEcCCCCc--cccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHc
Confidence 99999987654332 23456999999999987 468999999999999999999999997643221 1111111
Q ss_pred ccccccccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 529 EDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 529 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
... . ++. ......+..+.+++.+||+.||++|||++|+++
T Consensus 262 ~~~-~--~~~---~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~ 301 (504)
T 3q5i_A 262 GKY-Y--FDF---NDWKNISDEAKELIKLMLTYDYNKRCTAEEALN 301 (504)
T ss_dssp CCC-C--CCH---HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCC-C--CCc---cccCCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 110 0 000 000123467899999999999999999999985
No 221
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=2.1e-38 Score=317.96 Aligned_cols=251 Identities=24% Similarity=0.378 Sum_probs=203.2
Q ss_pred hcCCCccceeeeecceEEEEEEec-CCcEEEEEeecccc---------hhhHHHHHHHHHHHhhCC-CCeeeeeeeEEeC
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLN---------EGFDRFFERELEILGSIK-HRYLVNLRGYCNS 374 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---------~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~ 374 (594)
.++|...+.||+|+||.||+|... +++.||||.+.... ....+.+.+|++++.+++ ||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (298)
T 1phk_A 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 95 (298)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence 568889999999999999999875 58899999986432 123456889999999996 9999999999999
Q ss_pred CCceEEEEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccc
Q 007668 375 PTSKLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLA 454 (594)
Q Consensus 375 ~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~ 454 (594)
....++||||+++++|.+++..+ ..+++..+..++.||+.||.|||+ .+++||||||+||+++.++.++|+|||++
T Consensus 96 ~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~ 171 (298)
T 1phk_A 96 NTFFFLVFDLMKKGELFDYLTEK-VTLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFS 171 (298)
T ss_dssp SSEEEEEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred CCeEEEEEeccCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEEcCCCcEEEecccch
Confidence 99999999999999999999764 568999999999999999999995 49999999999999999999999999999
Q ss_pred cccccCCceeeeeeecccCccCccccc------cCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhc
Q 007668 455 KLLEDEESHITTIVAGTFGYLAPEYMQ------SGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLIS 528 (594)
Q Consensus 455 ~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 528 (594)
........ .....|++.|+|||++. ...++.++||||||+++|||++|+.||....... .......
T Consensus 172 ~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~------~~~~~~~ 243 (298)
T 1phk_A 172 CQLDPGEK--LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQML------MLRMIMS 243 (298)
T ss_dssp EECCTTCC--BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHH
T ss_pred hhcCCCcc--cccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHH------HHHHHhc
Confidence 87654332 23356899999999885 4568899999999999999999999986532211 1111111
Q ss_pred ccccccccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 529 EDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 529 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
.. . .... ......+..+.+++.+||+.||++|||+.|+++
T Consensus 244 ~~-~-~~~~----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 244 GN-Y-QFGS----PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp TC-C-CCCT----TTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred CC-c-ccCc----ccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 11 0 0000 111234567999999999999999999999875
No 222
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=2e-38 Score=323.80 Aligned_cols=259 Identities=20% Similarity=0.323 Sum_probs=200.6
Q ss_pred cCCCccceeeeecceEEEEEEe--cCCcEEEEEeecccchhhHHHHHHHHHHHhhCCCC------eeeeeeeEEeCCCce
Q 007668 307 ETLDDDHIIGSGGFGTVYKLAM--DDGNVFALKRIDKLNEGFDRFFERELEILGSIKHR------YLVNLRGYCNSPTSK 378 (594)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~------niv~l~g~~~~~~~~ 378 (594)
++|+..+.||+|+||.||+|.. .+++.||||+++... ...+.+.+|++++..++|+ +++++++++......
T Consensus 14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~ 92 (339)
T 1z57_A 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHI 92 (339)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEE
T ss_pred CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcE
Confidence 4788899999999999999976 368899999987543 3456788899999888665 499999999999999
Q ss_pred EEEEEccCCCchhhhhhhcC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecC---------------
Q 007668 379 LLIYDFLPGGSLDEALHERS-EQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDG--------------- 442 (594)
Q Consensus 379 ~lv~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~--------------- 442 (594)
++||||+ +++|.+++.... ..+++..+..++.||+.||+|||+ .+|+||||||+||+++.
T Consensus 93 ~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~ 168 (339)
T 1z57_A 93 CIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHS---NKLTHTDLKPENILFVQSDYTEAYNPKIKRDE 168 (339)
T ss_dssp EEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESCCCEEEEEC----CEE
T ss_pred EEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHEEEeccccccccCCcccccc
Confidence 9999999 889999997643 368999999999999999999995 49999999999999987
Q ss_pred ----CCcEEEeecccccccccCCceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccch
Q 007668 443 ----NLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLN 518 (594)
Q Consensus 443 ----~~~~~l~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~ 518 (594)
++.+||+|||++...... .....||+.|+|||++.+..++.++||||||+++|||++|+.||......+...
T Consensus 169 ~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~ 244 (339)
T 1z57_A 169 RTLINPDIKVVDFGSATYDDEH----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLA 244 (339)
T ss_dssp EEESCCCEEECCCSSCEETTSC----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHH
T ss_pred ccccCCCceEeeCcccccCccc----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHH
Confidence 668999999999865432 223568999999999999999999999999999999999999997643322111
Q ss_pred HHHHHHH-----Hhccccccccc---------------------CC--CCCCCCHHHHHHHHHHHHHcccCCCCCCCCHH
Q 007668 519 IVGWLNF-----LISEDRQREII---------------------DP--NCEGVQSESLDALLAVATQCVSSSPDDRPTMH 570 (594)
Q Consensus 519 ~~~~~~~-----~~~~~~~~~~~---------------------~~--~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ 570 (594)
....... ..........+ .+ ............+.+++.+||+.||++|||++
T Consensus 245 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ 324 (339)
T 1z57_A 245 MMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLR 324 (339)
T ss_dssp HHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHH
T ss_pred HHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHH
Confidence 1100000 00000000000 00 00012335567899999999999999999999
Q ss_pred HHHH
Q 007668 571 RVVQ 574 (594)
Q Consensus 571 ev~~ 574 (594)
|+++
T Consensus 325 ell~ 328 (339)
T 1z57_A 325 EALK 328 (339)
T ss_dssp HHTT
T ss_pred HHhc
Confidence 9874
No 223
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=1.4e-38 Score=323.43 Aligned_cols=262 Identities=23% Similarity=0.348 Sum_probs=199.5
Q ss_pred HhcCCCccceeeeecceEEEEEEe--cCCcEEEEEeecccc--hhhHHHHHHHHHHHhhC---CCCeeeeeeeEEe----
Q 007668 305 KLETLDDDHIIGSGGFGTVYKLAM--DDGNVFALKRIDKLN--EGFDRFFERELEILGSI---KHRYLVNLRGYCN---- 373 (594)
Q Consensus 305 ~~~~~~~~~~lG~G~~g~Vy~~~~--~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l---~h~niv~l~g~~~---- 373 (594)
..++|+..+.||+|+||.||+|.. .+++.||+|++.... ......+.+|+.+++.+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 346789999999999999999987 468899999987432 22233566777777666 8999999999986
Q ss_pred -CCCceEEEEEccCCCchhhhhhhcC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeec
Q 007668 374 -SPTSKLLIYDFLPGGSLDEALHERS-EQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDF 451 (594)
Q Consensus 374 -~~~~~~lv~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Df 451 (594)
.....++|+||++ |+|.+++.... ..+++..+..++.||+.||.|||+ .+|+||||||+||+++.++.+||+||
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~gi~H~dlkp~Nili~~~~~~kl~Df 164 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADF 164 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECSC
T ss_pred CCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCCHHHeEEcCCCCEEEecC
Confidence 5667889999997 69999997643 449999999999999999999995 49999999999999999999999999
Q ss_pred ccccccccCCceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcc--
Q 007668 452 GLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISE-- 529 (594)
Q Consensus 452 gl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-- 529 (594)
|++....... ......||+.|+|||++.+..++.++||||||+++|||++|+.||......... ..........
T Consensus 165 g~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~--~~i~~~~~~~~~ 240 (326)
T 1blx_A 165 GLARIYSFQM--ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQL--GKILDVIGLPGE 240 (326)
T ss_dssp CSCCCCCGGG--GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH--HHHHHHHCCCCG
T ss_pred cccccccCCC--CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHH--HHHHHHcCCCCc
Confidence 9998665332 123356899999999999999999999999999999999999999764322110 0000000000
Q ss_pred ccc-------cccc----CCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 530 DRQ-------REII----DPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 530 ~~~-------~~~~----~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
... ...+ ...........+..+.+++.+||+.||++|||+.|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 241 EDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp GGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 000 0000 00011122334567899999999999999999999984
No 224
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=4.1e-39 Score=326.24 Aligned_cols=262 Identities=22% Similarity=0.325 Sum_probs=192.8
Q ss_pred cCCCccceeeeecceEEEEEEecC-CcEEEEEeecccchhhHHHHHHHHHHHhhCCCCeeeeeeeEEe------------
Q 007668 307 ETLDDDHIIGSGGFGTVYKLAMDD-GNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCN------------ 373 (594)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~------------ 373 (594)
.+|...+.||+|+||.||+|.... ++.||+|++........+.+.+|++++++++||||+++++++.
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 90 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGS 90 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccc
Confidence 467888999999999999998764 8999999998766666778999999999999999999999873
Q ss_pred --CCCceEEEEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEec-CCCcEEEee
Q 007668 374 --SPTSKLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLD-GNLEARVSD 450 (594)
Q Consensus 374 --~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~-~~~~~~l~D 450 (594)
+....++||||++ |+|.+++.. ..+++..+..++.||+.||+|||+ .+|+||||||+||+++ +++.+||+|
T Consensus 91 ~~~~~~~~lv~e~~~-~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~kl~D 164 (320)
T 2i6l_A 91 LTELNSVYIVQEYME-TDLANVLEQ--GPLLEEHARLFMYQLLRGLKYIHS---ANVLHRDLKPANLFINTEDLVLKIGD 164 (320)
T ss_dssp CCSCSEEEEEEECCS-EEHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTTEEEECC
T ss_pred ccccCceeEEeeccC-CCHHHHhhc--CCccHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCeEEEcc
Confidence 3467789999997 699999864 568999999999999999999995 4999999999999997 567999999
Q ss_pred cccccccccCCce--eeeeeecccCccCcccccc-CCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHH-----
Q 007668 451 FGLAKLLEDEESH--ITTIVAGTFGYLAPEYMQS-GRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGW----- 522 (594)
Q Consensus 451 fgl~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~----- 522 (594)
||+++........ ......+|..|+|||.+.+ ..++.++||||||+++|||++|+.||..............
T Consensus 165 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 244 (320)
T 2i6l_A 165 FGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVV 244 (320)
T ss_dssp CTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCC
T ss_pred CccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCC
Confidence 9999876532211 1233457899999998865 6789999999999999999999999976432211000000
Q ss_pred ----HHHHhcc--ccccc-ccCCCC--CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 523 ----LNFLISE--DRQRE-IIDPNC--EGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 523 ----~~~~~~~--~~~~~-~~~~~~--~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
....... ..... ...+.. .......+..+.+++.+||+.||++|||++|+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 245 HEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp CHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred chhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 0000000 00000 000000 0011223567999999999999999999999986
No 225
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=5.2e-38 Score=326.46 Aligned_cols=200 Identities=23% Similarity=0.322 Sum_probs=171.5
Q ss_pred hcCCCccceeeeecceEEEEEEec-CCcEEEEEeecccchhhHHHHHHHHHHHhhCC-CC-----eeeeeeeEEeCCCce
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNEGFDRFFERELEILGSIK-HR-----YLVNLRGYCNSPTSK 378 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~l~g~~~~~~~~ 378 (594)
.++|...+.||+|+||+||+|... +++.||||+++... .....+.+|++++..++ |+ +++++.+++......
T Consensus 53 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 131 (382)
T 2vx3_A 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHL 131 (382)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEE
T ss_pred eeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCce
Confidence 568889999999999999999765 67889999997532 33566788888888875 44 499999999999999
Q ss_pred EEEEEccCCCchhhhhhhcC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEec--CCCcEEEeeccccc
Q 007668 379 LLIYDFLPGGSLDEALHERS-EQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLD--GNLEARVSDFGLAK 455 (594)
Q Consensus 379 ~lv~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~--~~~~~~l~Dfgl~~ 455 (594)
++||||++ |+|.+++.... ..+++..+..++.|++.||.|||.+ ..+|+||||||+|||++ .++.+||+|||+++
T Consensus 132 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~ 209 (382)
T 2vx3_A 132 CLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGSSC 209 (382)
T ss_dssp EEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred EEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEeccCce
Confidence 99999995 59999998643 5699999999999999999999954 46999999999999995 57789999999998
Q ss_pred ccccCCceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcch
Q 007668 456 LLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASF 512 (594)
Q Consensus 456 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~ 512 (594)
..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 210 ~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~ 262 (382)
T 2vx3_A 210 QLGQR----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGAN 262 (382)
T ss_dssp ETTCC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ecccc----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 76532 233568999999999999999999999999999999999999998643
No 226
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=1.6e-38 Score=326.78 Aligned_cols=260 Identities=21% Similarity=0.338 Sum_probs=197.8
Q ss_pred hcCCCccceeeeecceEEEEEEec-CCcEEEEEeecccc-hhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCC-----Cce
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLN-EGFDRFFERELEILGSIKHRYLVNLRGYCNSP-----TSK 378 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-----~~~ 378 (594)
.++|...+.||+|+||.||+|... +|+.||||++.... ......+.+|++++++++||||+++++++... ...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 357888899999999999999875 68899999997533 33456788999999999999999999987654 678
Q ss_pred EEEEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccc
Q 007668 379 LLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLE 458 (594)
Q Consensus 379 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~ 458 (594)
++|+||++ ++|.+++.. ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++....
T Consensus 90 ~lv~e~~~-~~L~~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 163 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVIST--QMLSDDHIQYFIYQTLRAVKVLHG---SNVIHRDLKPSNLLINSNCDLKVCDFGLARIID 163 (353)
T ss_dssp EEEECCCS-EEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEeccC-ccHHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEEcCCCcEEEEecccccccc
Confidence 99999996 699999875 469999999999999999999995 499999999999999999999999999998765
Q ss_pred cCCce---------eeeeeecccCccCcccccc-CCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhc
Q 007668 459 DEESH---------ITTIVAGTFGYLAPEYMQS-GRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLIS 528 (594)
Q Consensus 459 ~~~~~---------~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 528 (594)
..... ......||+.|+|||++.+ ..++.++||||||+++|||++|+.||.......... .......
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~---~~~~~~~ 240 (353)
T 2b9h_A 164 ESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLL---LIFGIIG 240 (353)
T ss_dssp ----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH---HHHHHHC
T ss_pred cccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHH---HHHHHhC
Confidence 32211 1123468999999998764 678999999999999999999999997643221100 0000000
Q ss_pred ccc------------cc----cc---cCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 529 EDR------------QR----EI---IDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 529 ~~~------------~~----~~---~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
... .. .. ............+..+.+++.+||+.||++|||++|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 241 TPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp CCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 000 00 00 000000011233467899999999999999999999986
No 227
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=9.8e-39 Score=324.09 Aligned_cols=251 Identities=23% Similarity=0.359 Sum_probs=194.6
Q ss_pred hcCCCccceeeeecceEEEEEEec-CCcEEEEEeecccch--------hhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCC
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNE--------GFDRFFERELEILGSIKHRYLVNLRGYCNSPT 376 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~ 376 (594)
.++|...+.||+|+||.||+|... +++.||||.+..... .....+.+|++++++++||||+++++++....
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 88 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 88 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence 357888999999999999999765 578999999864321 12345889999999999999999999987655
Q ss_pred ceEEEEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCc---EEEeeccc
Q 007668 377 SKLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLE---ARVSDFGL 453 (594)
Q Consensus 377 ~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~---~~l~Dfgl 453 (594)
.++||||+++++|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+||+++.++. +||+|||+
T Consensus 89 -~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~ 163 (322)
T 2ycf_A 89 -YYIVLELMEGGELFDKVVG-NKRLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGH 163 (322)
T ss_dssp -EEEEEECCTTEETHHHHST-TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSSSCCEEECCCTT
T ss_pred -eEEEEecCCCCcHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEecCCCCCeEEEccCcc
Confidence 8999999999999999875 3569999999999999999999995 49999999999999986654 99999999
Q ss_pred ccccccCCceeeeeeecccCccCccccc---cCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhccc
Q 007668 454 AKLLEDEESHITTIVAGTFGYLAPEYMQ---SGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISED 530 (594)
Q Consensus 454 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 530 (594)
+....... ......||+.|+|||++. ...++.++||||||+++|+|++|..||....... .+..... ..
T Consensus 164 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~~~~----~~ 235 (322)
T 2ycf_A 164 SKILGETS--LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV--SLKDQIT----SG 235 (322)
T ss_dssp CEECCCCH--HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS--CHHHHHH----HT
T ss_pred ceeccccc--ccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH--HHHHHHH----hC
Confidence 98765322 122346899999999974 4678999999999999999999999997543221 1111110 00
Q ss_pred ccccccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 531 RQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 531 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
... ..+......+..+.+++.+||+.||++|||++|+++
T Consensus 236 ~~~-----~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 236 KYN-----FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp CCC-----CCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ccc-----cCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 000 000001123467899999999999999999999874
No 228
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=4e-38 Score=323.86 Aligned_cols=255 Identities=22% Similarity=0.328 Sum_probs=195.9
Q ss_pred cCCCccceeeeecceEEEEEEec-CCcEEEEEeeccc--chhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCc------
Q 007668 307 ETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKL--NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTS------ 377 (594)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~------ 377 (594)
++|...+.||+|+||.||+|... +|+.||||++... .....+.+.+|+.+++.++||||+++++++.....
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 103 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 103 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence 46778899999999999999765 6899999999753 33345678899999999999999999999977654
Q ss_pred eEEEEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeeccccccc
Q 007668 378 KLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLL 457 (594)
Q Consensus 378 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~ 457 (594)
.++||||++ ++|.+++. ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 104 ~~lv~e~~~-~~l~~~~~---~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 176 (353)
T 3coi_A 104 FYLVMPFMQ-TDLQKIMG---LKFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHA 176 (353)
T ss_dssp CEEEEECCS-EEGGGTTT---SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTCTTC-
T ss_pred EEEEecccc-CCHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeecccccCC
Confidence 499999996 68988874 3489999999999999999999964 9999999999999999999999999999865
Q ss_pred ccCCceeeeeeecccCccCcccccc-CCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHh---------
Q 007668 458 EDEESHITTIVAGTFGYLAPEYMQS-GRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLI--------- 527 (594)
Q Consensus 458 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~--------- 527 (594)
... .....||+.|+|||++.+ ..++.++||||||+++|||++|+.||.......... ......-
T Consensus 177 ~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~--~i~~~~~~~~~~~~~~ 250 (353)
T 3coi_A 177 DAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLT--QILKVTGVPGTEFVQK 250 (353)
T ss_dssp -----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHH--HHHHHHCBCCHHHHTT
T ss_pred CCC----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH--HHHHHhCCCCHHHHHH
Confidence 432 233568999999999876 678999999999999999999999997643221100 0000000
Q ss_pred -cc-------cccccccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 528 -SE-------DRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 528 -~~-------~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
.. ........+.+.......+..+.+++.+||+.||++|||++|+++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 251 LNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp CSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00 000001111222223345678999999999999999999999985
No 229
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=1e-38 Score=332.84 Aligned_cols=256 Identities=22% Similarity=0.330 Sum_probs=193.3
Q ss_pred cCCCccceeeeecceEEEEEEecCCcEEEEEeecccchhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCc------eEE
Q 007668 307 ETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTS------KLL 380 (594)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~------~~l 380 (594)
.+|...+.||+|+||.||+|....+..+|+|++...... ..+|+++++.++||||+++++++..... .++
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~----~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l 115 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF----KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNL 115 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS----CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch----HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEE
Confidence 468888999999999999999988888999988653322 3469999999999999999999854333 679
Q ss_pred EEEccCCCchhhhhh--hcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEec-CCCcEEEeeccccccc
Q 007668 381 IYDFLPGGSLDEALH--ERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLD-GNLEARVSDFGLAKLL 457 (594)
Q Consensus 381 v~e~~~~gsL~~~l~--~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~-~~~~~~l~Dfgl~~~~ 457 (594)
||||++++.+....+ .....+++..+..++.||++||+|||+ .+|+||||||+|||++ .++.+||+|||+++..
T Consensus 116 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~ 192 (394)
T 4e7w_A 116 VLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHS---IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL 192 (394)
T ss_dssp EEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred EeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHEEEcCCCCcEEEeeCCCcccc
Confidence 999997754443332 235679999999999999999999995 4999999999999999 7999999999999876
Q ss_pred ccCCceeeeeeecccCccCccccccC-CCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHH----------H
Q 007668 458 EDEESHITTIVAGTFGYLAPEYMQSG-RATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNF----------L 526 (594)
Q Consensus 458 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~----------~ 526 (594)
..... .....||+.|+|||++.+. .++.++||||+||++|||++|+.||......+. +...... .
T Consensus 193 ~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~--l~~i~~~~g~p~~~~~~~ 268 (394)
T 4e7w_A 193 IAGEP--NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQ--LVEIIKVLGTPSREQIKT 268 (394)
T ss_dssp CTTCC--CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHHHCCCCHHHHHH
T ss_pred cCCCC--CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHHhCCCCHHHHHh
Confidence 54332 2345689999999998764 589999999999999999999999976432211 1111100 0
Q ss_pred hcccccccccCCCCCC------CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 527 ISEDRQREIIDPNCEG------VQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 527 ~~~~~~~~~~~~~~~~------~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
.........+ +.... .....+..+.+|+.+||+.||++|||+.|+++
T Consensus 269 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (394)
T 4e7w_A 269 MNPNYMEHKF-PQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC 321 (394)
T ss_dssp HCGGGSSSCC-CCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred hChhhhhhcc-ccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence 0000000000 00000 11224467999999999999999999999986
No 230
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=8.3e-39 Score=335.16 Aligned_cols=197 Identities=25% Similarity=0.412 Sum_probs=153.0
Q ss_pred CCc-cceeeeecceEEEEEEec---CCcEEEEEeecccchhhHHHHHHHHHHHhhCCCCeeeeeeeEE--eCCCceEEEE
Q 007668 309 LDD-DHIIGSGGFGTVYKLAMD---DGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYC--NSPTSKLLIY 382 (594)
Q Consensus 309 ~~~-~~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~--~~~~~~~lv~ 382 (594)
|.. .++||+|+||.||+|... ++..||+|++..... ...+.+|++++++++||||+++++++ ......++||
T Consensus 22 y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~ 99 (405)
T 3rgf_A 22 FEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI--SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLF 99 (405)
T ss_dssp EECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC--CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEE
T ss_pred hhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC--CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEE
Confidence 443 568999999999999865 578899999975432 34688999999999999999999999 4467789999
Q ss_pred EccCCCchhhhhhhc--------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEe----cCCCcEEEee
Q 007668 383 DFLPGGSLDEALHER--------SEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILL----DGNLEARVSD 450 (594)
Q Consensus 383 e~~~~gsL~~~l~~~--------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll----~~~~~~~l~D 450 (594)
||++ |+|.+++... ...+++..+..++.||+.||+|||+ .+|+||||||+|||+ +.++.+||+|
T Consensus 100 e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kl~D 175 (405)
T 3rgf_A 100 DYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKIAD 175 (405)
T ss_dssp ECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECCSSTTTTCEEECC
T ss_pred eCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCEeCCCcCHHHeEEecCCCCCCcEEEEE
Confidence 9996 5888877531 1249999999999999999999995 499999999999999 6778999999
Q ss_pred cccccccccCCc--eeeeeeecccCccCccccccC-CCCccchhhhHHHHHHHHHhCCCCCCcc
Q 007668 451 FGLAKLLEDEES--HITTIVAGTFGYLAPEYMQSG-RATEKTDVYSFGVLVLEVLSGKRPTDAS 511 (594)
Q Consensus 451 fgl~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~elltg~~p~~~~ 511 (594)
||+++....... .......||+.|+|||++.+. .++.++|||||||++|||++|+.||...
T Consensus 176 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 239 (405)
T 3rgf_A 176 MGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 239 (405)
T ss_dssp TTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCC
T ss_pred CCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCc
Confidence 999987654322 223446789999999998874 5899999999999999999999999754
No 231
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=6e-38 Score=329.71 Aligned_cols=256 Identities=26% Similarity=0.365 Sum_probs=192.0
Q ss_pred cCCCccceeeeecceEEEEEEec-CCcEEEEEeecccchhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCC----C--ceE
Q 007668 307 ETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSP----T--SKL 379 (594)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~----~--~~~ 379 (594)
.+|...+.||+|+||.||+|... +|+.||||++..... ...+|++++++++||||+++++++... . ..+
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~ 129 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence 46788899999999999999875 589999999875432 234799999999999999999988432 2 256
Q ss_pred EEEEccCCCchhhhhh---hcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCC-CcEEEeeccccc
Q 007668 380 LIYDFLPGGSLDEALH---ERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGN-LEARVSDFGLAK 455 (594)
Q Consensus 380 lv~e~~~~gsL~~~l~---~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~-~~~~l~Dfgl~~ 455 (594)
+||||+++ ++.+.+. .....+++..+..++.||++||+||| +.+|+||||||+|||++.+ +.+||+|||+++
T Consensus 130 lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~ 205 (420)
T 1j1b_A 130 LVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205 (420)
T ss_dssp EEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred eehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChhhEEEeCCCCeEEeccchhhh
Confidence 89999975 6666554 23567999999999999999999999 4599999999999999955 678999999998
Q ss_pred ccccCCceeeeeeecccCccCccccccC-CCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhc------
Q 007668 456 LLEDEESHITTIVAGTFGYLAPEYMQSG-RATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLIS------ 528 (594)
Q Consensus 456 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~------ 528 (594)
....... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||......+. +.......-.
T Consensus 206 ~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~--l~~i~~~lg~p~~~~~ 281 (420)
T 1j1b_A 206 QLVRGEP--NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ--LVEIIKVLGTPTREQI 281 (420)
T ss_dssp ECCTTCC--CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHHHCSCCHHHH
T ss_pred hcccCCC--ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHHhCCCCHHHH
Confidence 7654332 2335689999999998764 789999999999999999999999976432211 1111110000
Q ss_pred ---ccccccccCCCCCC------CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 529 ---EDRQREIIDPNCEG------VQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 529 ---~~~~~~~~~~~~~~------~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
.........+.... .....+..+.+|+.+||+.||++|||+.|+++
T Consensus 282 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 282 REMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336 (420)
T ss_dssp HHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence 00001111111111 11233467999999999999999999999985
No 232
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=2.8e-38 Score=327.08 Aligned_cols=255 Identities=22% Similarity=0.329 Sum_probs=194.3
Q ss_pred cCCCccceeeeecceEEEEEEec-CCcEEEEEeeccc--chhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCce-----
Q 007668 307 ETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKL--NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSK----- 378 (594)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~----- 378 (594)
++|...+.||+|+||.||+|... +|+.||||++... .....+.+.+|+.+++.++||||+++++++......
T Consensus 42 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 121 (371)
T 4exu_A 42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 121 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCC
T ss_pred ccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCccccee
Confidence 46788899999999999999765 6899999999753 333457788999999999999999999999877655
Q ss_pred -EEEEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeeccccccc
Q 007668 379 -LLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLL 457 (594)
Q Consensus 379 -~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~ 457 (594)
++||||++ ++|.+.+. ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 122 ~~lv~e~~~-~~l~~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~ 194 (371)
T 4exu_A 122 FYLVMPFMQ-TDLQKIMG---MEFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHA 194 (371)
T ss_dssp CEEEEECCC-EEHHHHTT---SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTCC---
T ss_pred EEEEEcccc-ccHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCccccc
Confidence 99999996 68888874 3499999999999999999999954 9999999999999999999999999999865
Q ss_pred ccCCceeeeeeecccCccCcccccc-CCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhc--------
Q 007668 458 EDEESHITTIVAGTFGYLAPEYMQS-GRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLIS-------- 528 (594)
Q Consensus 458 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~-------- 528 (594)
... .....||+.|+|||++.+ ..++.++||||||+++|||++|+.||......+.. .......-.
T Consensus 195 ~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~--~~i~~~~~~~~~~~~~~ 268 (371)
T 4exu_A 195 DAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQL--TQILKVTGVPGTEFVQK 268 (371)
T ss_dssp ---------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHH--HHHHHHHCCCCHHHHTT
T ss_pred ccC----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHH--HHHHHHhCCCcHHHHHH
Confidence 432 233568999999999887 68899999999999999999999999764322110 000000000
Q ss_pred --c----cccccccCCC---CCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 529 --E----DRQREIIDPN---CEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 529 --~----~~~~~~~~~~---~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
. .......... ........+..+.+|+.+||+.||++|||++|+++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 323 (371)
T 4exu_A 269 LNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 323 (371)
T ss_dssp CSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred hhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence 0 0000000000 00011223567999999999999999999999986
No 233
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=4.7e-38 Score=324.24 Aligned_cols=269 Identities=19% Similarity=0.259 Sum_probs=191.8
Q ss_pred HHHHHHHhcCCCccceeeeecceEEEEEEec-CCcEEEEEeecccchhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCc
Q 007668 299 SKDIIKKLETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTS 377 (594)
Q Consensus 299 ~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~ 377 (594)
........++|...+.||+|+||.||+|... +++.||||++..... ....+.+|++.+..++||||+++++++.....
T Consensus 15 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~ 93 (360)
T 3e3p_A 15 DERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR-FRNRELQIMQDLAVLHHPNIVQLQSYFYTLGE 93 (360)
T ss_dssp SHHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTT-CCCHHHHHHHHHHHHCCTTBCCEEEEEEEECS
T ss_pred hhhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcc-ccHHHHHHHHHHHhcCCCCcccHHHhhhcccc
Confidence 4566777899999999999999999999875 689999998865332 23456678888899999999999999865433
Q ss_pred -------eEEEEEccCCCchhhhhh---hcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecC-CCcE
Q 007668 378 -------KLLIYDFLPGGSLDEALH---ERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDG-NLEA 446 (594)
Q Consensus 378 -------~~lv~e~~~~gsL~~~l~---~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~-~~~~ 446 (594)
.++||||+++ +|.+.+. .....+++..+..++.|++.||.|||.+ +.+|+||||||+|||++. ++.+
T Consensus 94 ~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~~~ivH~Dlkp~NIll~~~~~~~ 171 (360)
T 3e3p_A 94 RDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLP-SVNVCHRDIKPHNVLVNEADGTL 171 (360)
T ss_dssp SCTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTST-TTCCBCSCCCGGGEEEETTTTEE
T ss_pred ccccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCC-CCCeecCcCCHHHEEEeCCCCcE
Confidence 6899999976 5544443 2456689999999999999999999943 459999999999999996 8999
Q ss_pred EEeecccccccccCCceeeeeeecccCccCccccccC-CCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHH
Q 007668 447 RVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSG-RATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNF 525 (594)
Q Consensus 447 ~l~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~ 525 (594)
||+|||++........ .....||+.|+|||++.+. .++.++||||||+++|||++|+.||......... ......
T Consensus 172 kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~--~~~~~~ 247 (360)
T 3e3p_A 172 KLCDFGSAKKLSPSEP--NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQL--HEIVRV 247 (360)
T ss_dssp EECCCTTCBCCCTTSC--CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH--HHHHHH
T ss_pred EEeeCCCceecCCCCC--cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHH--HHHHHH
Confidence 9999999987654332 2334689999999998665 4899999999999999999999999764332111 111110
Q ss_pred -----------HhcccccccccCCC-------CCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 526 -----------LISEDRQREIIDPN-------CEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 526 -----------~~~~~~~~~~~~~~-------~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
...........+.. ........+..+.+|+.+||+.||++|||+.|+++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 314 (360)
T 3e3p_A 248 LGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC 314 (360)
T ss_dssp HCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred cCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence 00000000000000 01112234678999999999999999999999986
No 234
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=4e-38 Score=318.29 Aligned_cols=250 Identities=19% Similarity=0.339 Sum_probs=195.1
Q ss_pred hcCCCccceeeeecceEEEEEEecCCcEEEEEeeccc--chhhHHHHHHHHHHHhhCC--CCeeeeeeeEEeCCCceEEE
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKL--NEGFDRFFERELEILGSIK--HRYLVNLRGYCNSPTSKLLI 381 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~--h~niv~l~g~~~~~~~~~lv 381 (594)
.++|...+.||+|+||.||++...+++.||||++... .....+.+.+|++++.+++ ||||+++++++.+....++|
T Consensus 27 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 106 (313)
T 3cek_A 27 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 106 (313)
T ss_dssp TEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEE
T ss_pred cceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEE
Confidence 4678889999999999999999988999999998643 3344577899999999997 59999999999999999999
Q ss_pred EEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccCC
Q 007668 382 YDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEE 461 (594)
Q Consensus 382 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~ 461 (594)
|| +.+++|.+++... ..+++..+..++.|+++||.|||+. +|+||||||+||++++ +.+||+|||++.......
T Consensus 107 ~e-~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~~ 180 (313)
T 3cek_A 107 ME-CGNIDLNSWLKKK-KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDT 180 (313)
T ss_dssp EC-CCSEEHHHHHHHC-SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEECCCSSSCC-----
T ss_pred Ee-cCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEeeccccccccCcc
Confidence 99 5688999999764 5789999999999999999999954 9999999999999974 899999999998765433
Q ss_pred ce-eeeeeecccCccCcccccc-----------CCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcc
Q 007668 462 SH-ITTIVAGTFGYLAPEYMQS-----------GRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISE 529 (594)
Q Consensus 462 ~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 529 (594)
.. ......|++.|+|||.+.+ ..++.++||||||+++|||++|+.||...... ..........
T Consensus 181 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~-----~~~~~~~~~~ 255 (313)
T 3cek_A 181 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ-----ISKLHAIIDP 255 (313)
T ss_dssp ---------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSH-----HHHHHHHHCT
T ss_pred ccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHH-----HHHHHHHHhc
Confidence 22 2234568999999999875 46888999999999999999999998653211 1111111111
Q ss_pred cccccccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 530 DRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 530 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
.. . .. .+......+.+++.+||+.||++|||++|+++
T Consensus 256 ~~-~----~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 292 (313)
T 3cek_A 256 NH-E----IE---FPDIPEKDLQDVLKCCLKRDPKQRISIPELLA 292 (313)
T ss_dssp TS-C----CC---CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cc-c----cC---CcccchHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 11 0 01 11122357899999999999999999999986
No 235
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.7e-38 Score=331.88 Aligned_cols=248 Identities=25% Similarity=0.360 Sum_probs=189.1
Q ss_pred cCCCccceeeeecceEEEEEEecCCcEEEEEeecccchhhHHHHHHHHHHHhhC-CCCeeeeeeeEEeCCCceEEEEEcc
Q 007668 307 ETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSI-KHRYLVNLRGYCNSPTSKLLIYDFL 385 (594)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~~ 385 (594)
.+|...++||+|+||+||.....+++.||||++..... ..+.+|+++++++ +||||+++++++.+....++||||+
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~ 100 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELC 100 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECC
Confidence 35777899999999997766677899999999865332 2356799999999 7999999999999999999999999
Q ss_pred CCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecC-----CCcEEEeecccccccccC
Q 007668 386 PGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDG-----NLEARVSDFGLAKLLEDE 460 (594)
Q Consensus 386 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~-----~~~~~l~Dfgl~~~~~~~ 460 (594)
+ |+|.+++........+..+..++.||+.||+|||+ .+|+||||||+|||++. ...+||+|||+++.....
T Consensus 101 ~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~ 176 (432)
T 3p23_A 101 A-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHS---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVG 176 (432)
T ss_dssp S-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHH---TTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC---
T ss_pred C-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHH---CcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCC
Confidence 5 69999998766556666778999999999999995 49999999999999953 336889999999876543
Q ss_pred Cc--eeeeeeecccCccCccccc---cCCCCccchhhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHHHHhccccccc
Q 007668 461 ES--HITTIVAGTFGYLAPEYMQ---SGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLNFLISEDRQRE 534 (594)
Q Consensus 461 ~~--~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 (594)
.. .......||+.|+|||++. ...++.++|||||||++|||++ |..||....... .........
T Consensus 177 ~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~-------~~~~~~~~~--- 246 (432)
T 3p23_A 177 RHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQ-------ANILLGACS--- 246 (432)
T ss_dssp ---------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHH-------HHHHTTCCC---
T ss_pred CcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHH-------HHHHhccCC---
Confidence 22 2234467999999999987 4567889999999999999999 899985432211 111111111
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 535 IIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 535 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
.............+.+|+.+||+.||++|||++||++
T Consensus 247 ---~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 247 ---LDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp ---CTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ---ccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 1111122344566889999999999999999999983
No 236
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=5e-38 Score=319.57 Aligned_cols=253 Identities=25% Similarity=0.379 Sum_probs=177.7
Q ss_pred hcCCCccceeeeecceEEEEEEec-CCcEEEEEeecccc-hhhHHHHHHHHH-HHhhCCCCeeeeeeeEEeCCCceEEEE
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLN-EGFDRFFERELE-ILGSIKHRYLVNLRGYCNSPTSKLLIY 382 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~-~l~~l~h~niv~l~g~~~~~~~~~lv~ 382 (594)
.++|...+.||+|+||.||+|... +|+.||||++.... ......+..|+. +++.++||||+++++++.+....++||
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 357788899999999999999875 68999999997542 333445556665 677789999999999999999999999
Q ss_pred EccCCCchhhhhhh----cCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccc
Q 007668 383 DFLPGGSLDEALHE----RSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLE 458 (594)
Q Consensus 383 e~~~~gsL~~~l~~----~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~ 458 (594)
||+++ +|.+++.. ....+++..+..++.|++.||.|||+. .+|+||||||+||+++.++.+||+|||++....
T Consensus 101 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~--~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~ 177 (327)
T 3aln_A 101 ELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN--LKIIHRDIKPSNILLDRSGNIKLCDFGISGQLV 177 (327)
T ss_dssp CCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHH--HSCCCSCCCGGGEEEETTTEEEECCCSSSCC--
T ss_pred eecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhcc--CCEeECCCCHHHEEEcCCCCEEEccCCCceecc
Confidence 99974 88877753 246699999999999999999999952 289999999999999999999999999998765
Q ss_pred cCCceeeeeeecccCccCcccc----ccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhccccccc
Q 007668 459 DEESHITTIVAGTFGYLAPEYM----QSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQRE 534 (594)
Q Consensus 459 ~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 (594)
.... .....||+.|+|||++ .+..++.++||||||+++|||++|+.||........ ...... .
T Consensus 178 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-----~~~~~~------~ 244 (327)
T 3aln_A 178 DSIA--KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFD-----QLTQVV------K 244 (327)
T ss_dssp ------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC------------CCCC------C
T ss_pred cccc--cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHH-----HHHHHh------c
Confidence 4322 2234689999999998 456789999999999999999999999975321100 000000 0
Q ss_pred ccCCCCCC-CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 535 IIDPNCEG-VQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 535 ~~~~~~~~-~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
...+.+.. .....+..+.+++.+||+.||++|||+.|+++
T Consensus 245 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 245 GDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp SCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 00011110 11234567999999999999999999999975
No 237
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=2e-37 Score=309.03 Aligned_cols=250 Identities=25% Similarity=0.362 Sum_probs=201.2
Q ss_pred hcCCCccceeeeecceEEEEEEec-CCcEEEEEeeccc--chhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEEE
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKL--NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIY 382 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ 382 (594)
.++|...+.||+|+||.||+|... +++.||+|++... .....+.+.+|++++++++||||+++++++.+....++|+
T Consensus 21 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 100 (287)
T 2wei_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (287)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEE
Confidence 467889999999999999999876 6899999998653 2334567899999999999999999999999999999999
Q ss_pred EccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCC---CcEEEeeccccccccc
Q 007668 383 DFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGN---LEARVSDFGLAKLLED 459 (594)
Q Consensus 383 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~---~~~~l~Dfgl~~~~~~ 459 (594)
||+++++|.+.+... ..+++..+..++.||+.||.|||+ .+++||||||+||+++.+ +.+||+|||++.....
T Consensus 101 e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~ 176 (287)
T 2wei_A 101 ELYTGGELFDEIIKR-KRFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176 (287)
T ss_dssp CCCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCC
T ss_pred EccCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCChhhEEEecCCCcccEEEeccCcceeecC
Confidence 999999999998754 468999999999999999999995 499999999999999754 4799999999986654
Q ss_pred CCceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCCC
Q 007668 460 EESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPN 539 (594)
Q Consensus 460 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (594)
... .....|++.|+|||.+.+ .++.++||||||+++|+|++|+.||....... ......... .. ..
T Consensus 177 ~~~--~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~------~~~~~~~~~-~~----~~ 242 (287)
T 2wei_A 177 NTK--MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD------ILKRVETGK-YA----FD 242 (287)
T ss_dssp CSS--CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHCC-CC----CC
T ss_pred CCc--cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHH------HHHHHHcCC-CC----CC
Confidence 322 223458999999998875 58999999999999999999999997643221 111111111 00 00
Q ss_pred CCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 540 CEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 540 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
.+ .....+..+.+++.+||+.||++|||++|+++
T Consensus 243 ~~-~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 243 LP-QWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp SG-GGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ch-hhhhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 00 01123467899999999999999999999987
No 238
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=1.7e-37 Score=314.28 Aligned_cols=252 Identities=23% Similarity=0.381 Sum_probs=181.7
Q ss_pred hcCCCccceeeeecceEEEEEEec-CCcEEEEEeecccch--hhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEEE
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNE--GFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIY 382 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ 382 (594)
.++|...+.||+|+||.||+|... +|+.||||++..... ...+.+.++..+++.++||||+++++++.+....++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 567888899999999999999875 689999999975432 22334455556788889999999999999999999999
Q ss_pred EccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccCCc
Q 007668 383 DFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEES 462 (594)
Q Consensus 383 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~~ 462 (594)
||+ ++.+..+.......+++..+..++.||+.||.|||+. .+|+||||||+||+++.++.+||+|||++........
T Consensus 104 e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~--~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~ 180 (318)
T 2dyl_A 104 ELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEK--HGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKA 180 (318)
T ss_dssp CCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHH--HCCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred ecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhh--CCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCcc
Confidence 999 5566666555567799999999999999999999951 2899999999999999999999999999976654322
Q ss_pred eeeeeeecccCccCccccc-----cCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccC
Q 007668 463 HITTIVAGTFGYLAPEYMQ-----SGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIID 537 (594)
Q Consensus 463 ~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 537 (594)
.....||+.|+|||++. ...++.++||||||+++|||++|+.||...... .............
T Consensus 181 --~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~~~~~~~~~~----- 248 (318)
T 2dyl_A 181 --KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTD-----FEVLTKVLQEEPP----- 248 (318)
T ss_dssp --------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSH-----HHHHHHHHHSCCC-----
T ss_pred --ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCcc-----HHHHHHHhccCCC-----
Confidence 23346899999999984 456889999999999999999999999753211 1111111111110
Q ss_pred CCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 538 PNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 538 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
..+ .....+..+.+++.+||+.||++|||++|+++
T Consensus 249 -~~~-~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 249 -LLP-GHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp -CCC-SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred -CCC-ccCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 010 01123467899999999999999999999985
No 239
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=8.1e-38 Score=319.11 Aligned_cols=256 Identities=20% Similarity=0.261 Sum_probs=174.1
Q ss_pred hcCCCcc-ceeeeecceEEEEEEec-CCcEEEEEeecccchhhHHHHHHHHHHHhhCCCCeeeeeeeEEeC----CCceE
Q 007668 306 LETLDDD-HIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNS----PTSKL 379 (594)
Q Consensus 306 ~~~~~~~-~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~----~~~~~ 379 (594)
.++|... ++||+|+||.||+|... +++.||||++..... ...+....+..++||||+++++++.. ....+
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 102 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPK----ARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLL 102 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHH----HHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHH----HHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEE
Confidence 4567774 57999999999999876 689999999865321 22222334567799999999999865 44578
Q ss_pred EEEEccCCCchhhhhhhcC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecC---CCcEEEeeccccc
Q 007668 380 LIYDFLPGGSLDEALHERS-EQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDG---NLEARVSDFGLAK 455 (594)
Q Consensus 380 lv~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~---~~~~~l~Dfgl~~ 455 (594)
+||||+++|+|.+++.... ..+++..+..++.||+.||+|||+. +|+||||||+||+++. ++.+||+|||++.
T Consensus 103 lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~ 179 (336)
T 3fhr_A 103 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK 179 (336)
T ss_dssp EEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCE
T ss_pred EEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEeccccce
Confidence 9999999999999998653 4699999999999999999999964 9999999999999986 4559999999998
Q ss_pred ccccCCceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccc
Q 007668 456 LLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREI 535 (594)
Q Consensus 456 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 535 (594)
...... .....||+.|+|||++.+..++.++||||||+++|+|++|+.||.......... .......... ...
T Consensus 180 ~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~---~~~~~~~~~~-~~~ 252 (336)
T 3fhr_A 180 ETTQNA---LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISP---GMKRRIRLGQ-YGF 252 (336)
T ss_dssp EC-------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-------------------------CC
T ss_pred eccccc---cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhh---hHHHhhhccc-ccc
Confidence 654322 234568999999999988889999999999999999999999997643221100 0000000000 000
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHhcc
Q 007668 536 IDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ--ILESE 579 (594)
Q Consensus 536 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~--~L~~~ 579 (594)
..+ .....+..+.+++.+||+.||++|||++|+++ .+++.
T Consensus 253 ~~~----~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 294 (336)
T 3fhr_A 253 PNP----EWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQS 294 (336)
T ss_dssp CTT----TSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTG
T ss_pred Cch----hhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCcccccc
Confidence 011 11234567899999999999999999999997 55543
No 240
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=1.5e-37 Score=328.06 Aligned_cols=248 Identities=24% Similarity=0.320 Sum_probs=186.2
Q ss_pred CCccceeeeecceEEEEEEecCCcEEEEEeecccchhhHHHHHHHHHHHhhC-CCCeeeeeeeEEeCCCceEEEEEccCC
Q 007668 309 LDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSI-KHRYLVNLRGYCNSPTSKLLIYDFLPG 387 (594)
Q Consensus 309 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~~~~ 387 (594)
|...+.||+|+||+||.+...+|+.||||++.... .+.+.+|++++.++ +||||+++++++.+....++||||++
T Consensus 17 ~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~- 92 (434)
T 2rio_A 17 VVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF---CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN- 92 (434)
T ss_dssp EEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG---HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-
T ss_pred eeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-
Confidence 34467899999999988777789999999986532 34678899999876 89999999999999999999999995
Q ss_pred CchhhhhhhcCCC------CCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCC-------------CcEEE
Q 007668 388 GSLDEALHERSEQ------LDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGN-------------LEARV 448 (594)
Q Consensus 388 gsL~~~l~~~~~~------l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~-------------~~~~l 448 (594)
|+|.+++...... .++..+..++.||+.||+|||+ .+|+||||||+|||++.+ +.+||
T Consensus 93 gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL 169 (434)
T 2rio_A 93 LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILI 169 (434)
T ss_dssp EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEE
T ss_pred CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEecCcccccccccCCCceEEEE
Confidence 6999999754221 1233457899999999999995 499999999999999754 48999
Q ss_pred eecccccccccCCce---eeeeeecccCccCcccccc-------CCCCccchhhhHHHHHHHHHh-CCCCCCcchhcccc
Q 007668 449 SDFGLAKLLEDEESH---ITTIVAGTFGYLAPEYMQS-------GRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGL 517 (594)
Q Consensus 449 ~Dfgl~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-------~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~ 517 (594)
+|||++......... ......||+.|+|||++.+ ..++.++|||||||++|||++ |+.||.......
T Consensus 170 ~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~-- 247 (434)
T 2rio_A 170 SDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE-- 247 (434)
T ss_dssp CCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH--
T ss_pred cccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH--
Confidence 999999877654322 1234579999999999875 578999999999999999999 999986542211
Q ss_pred hHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 518 NIVGWLNFLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 518 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
...... ... .+..........+..+.+++.+||+.||++|||+.||++
T Consensus 248 --~~i~~~---~~~----~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 248 --SNIIRG---IFS----LDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp --HHHHHT---CCC----CCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred --HHHhcC---CCC----cccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 111100 000 000001123566788999999999999999999999985
No 241
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=1.6e-37 Score=319.27 Aligned_cols=259 Identities=22% Similarity=0.288 Sum_probs=197.6
Q ss_pred cCCCccceeeeecceEEEEEEec-CC-cEEEEEeecccchhhHHHHHHHHHHHhhCCCCe------eeeeeeEEeCCCce
Q 007668 307 ETLDDDHIIGSGGFGTVYKLAMD-DG-NVFALKRIDKLNEGFDRFFERELEILGSIKHRY------LVNLRGYCNSPTSK 378 (594)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~g~~~~~~~~ 378 (594)
++|...+.||+|+||.||+|... ++ ..||+|+++... ...+.+.+|++++++++|++ ++.+.+++......
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 97 (355)
T 2eu9_A 19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG-KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHM 97 (355)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEE
T ss_pred ccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc-cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeE
Confidence 57888999999999999999764 34 689999987532 34567888999999987665 89999999999999
Q ss_pred EEEEEccCCCchhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEe-----------------
Q 007668 379 LLIYDFLPGGSLDEALHER-SEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILL----------------- 440 (594)
Q Consensus 379 ~lv~e~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll----------------- 440 (594)
++||||+ ++++.+.+... ...+++..+..++.||+.||+||| +.+|+||||||+|||+
T Consensus 98 ~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~ 173 (355)
T 2eu9_A 98 CIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNEHKSCEE 173 (355)
T ss_dssp EEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEESCCCEEEEECCC-CCCE
T ss_pred EEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEecccccccccccccccc
Confidence 9999999 66777776654 356999999999999999999999 4599999999999999
Q ss_pred --cCCCcEEEeecccccccccCCceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccch
Q 007668 441 --DGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLN 518 (594)
Q Consensus 441 --~~~~~~~l~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~ 518 (594)
+.++.+||+|||++....... ....||+.|+|||++.+..++.++||||||+++|||++|+.||..........
T Consensus 174 ~~~~~~~~kl~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~ 249 (355)
T 2eu9_A 174 KSVKNTSIRVADFGSATFDHEHH----TTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLV 249 (355)
T ss_dssp EEESCCCEEECCCTTCEETTSCC----CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH
T ss_pred cccCCCcEEEeecCccccccccc----cCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 567899999999998654322 33568999999999999999999999999999999999999997643221111
Q ss_pred HHHHHHH-----Hhcccccccc-------cCC----------------CCCCCCHHHHHHHHHHHHHcccCCCCCCCCHH
Q 007668 519 IVGWLNF-----LISEDRQREI-------IDP----------------NCEGVQSESLDALLAVATQCVSSSPDDRPTMH 570 (594)
Q Consensus 519 ~~~~~~~-----~~~~~~~~~~-------~~~----------------~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ 570 (594)
....... .......... .+. ............+.+|+.+||+.||++|||++
T Consensus 250 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ 329 (355)
T 2eu9_A 250 MMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLA 329 (355)
T ss_dssp HHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHH
T ss_pred HHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHH
Confidence 1000000 0000000000 000 00011234456899999999999999999999
Q ss_pred HHHH
Q 007668 571 RVVQ 574 (594)
Q Consensus 571 ev~~ 574 (594)
|+++
T Consensus 330 e~l~ 333 (355)
T 2eu9_A 330 EALL 333 (355)
T ss_dssp HHTT
T ss_pred HHhc
Confidence 9874
No 242
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=8.1e-38 Score=324.02 Aligned_cols=264 Identities=19% Similarity=0.244 Sum_probs=199.0
Q ss_pred cCCCccceeeeecceEEEEEEe-cCCcEEEEEeecccchhhHHHHHHHHHHHhhCC-----------CCeeeeeeeEEeC
Q 007668 307 ETLDDDHIIGSGGFGTVYKLAM-DDGNVFALKRIDKLNEGFDRFFERELEILGSIK-----------HRYLVNLRGYCNS 374 (594)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~l~g~~~~ 374 (594)
.+|...+.||+|+||.||+|.. .+++.||||++... ....+.+.+|++++.+++ ||||+++++++..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~ 97 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH 97 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence 5788899999999999999976 56889999998753 234567888999988886 8999999999875
Q ss_pred CC----ceEEEEEccCCCchhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEec------CC
Q 007668 375 PT----SKLLIYDFLPGGSLDEALHER-SEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLD------GN 443 (594)
Q Consensus 375 ~~----~~~lv~e~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~------~~ 443 (594)
.. ..++||||+ +++|.+++... ...+++..+..++.||+.||+|||++ .+|+||||||+|||++ ..
T Consensus 98 ~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~--~~ivH~Dikp~NIll~~~~~~~~~ 174 (373)
T 1q8y_A 98 KGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRR--CGIIHTDIKPENVLMEIVDSPENL 174 (373)
T ss_dssp EETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHT--TCEECSCCSGGGEEEEEEETTTTE
T ss_pred cCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhc--CCEEecCCChHHeEEeccCCCcCc
Confidence 43 678999999 89999999763 34599999999999999999999952 2899999999999994 44
Q ss_pred CcEEEeecccccccccCCceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccc----hH
Q 007668 444 LEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGL----NI 519 (594)
Q Consensus 444 ~~~~l~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~----~~ 519 (594)
+.+||+|||++....... ....||+.|+|||++.+..++.++||||||+++|||++|+.||......... .+
T Consensus 175 ~~~kl~Dfg~a~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~ 250 (373)
T 1q8y_A 175 IQIKIADLGNACWYDEHY----TNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHI 250 (373)
T ss_dssp EEEEECCCTTCEETTBCC----CSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHH
T ss_pred ceEEEcccccccccCCCC----CCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHH
Confidence 489999999998765332 2346899999999999999999999999999999999999999764321110 01
Q ss_pred HHHHHHH-----------------hccc-ccccccCC----------CCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHH
Q 007668 520 VGWLNFL-----------------ISED-RQREIIDP----------NCEGVQSESLDALLAVATQCVSSSPDDRPTMHR 571 (594)
Q Consensus 520 ~~~~~~~-----------------~~~~-~~~~~~~~----------~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~e 571 (594)
....... .... ....+... .....+......+.+|+.+||+.||++|||++|
T Consensus 251 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e 330 (373)
T 1q8y_A 251 AQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGG 330 (373)
T ss_dssp HHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHH
T ss_pred HHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHH
Confidence 1100000 0000 00000000 001234567788999999999999999999999
Q ss_pred HHH--HHhc
Q 007668 572 VVQ--ILES 578 (594)
Q Consensus 572 v~~--~L~~ 578 (594)
+++ .+.+
T Consensus 331 ll~hp~f~~ 339 (373)
T 1q8y_A 331 LVNHPWLKD 339 (373)
T ss_dssp HHTCGGGTT
T ss_pred HhhChhhhc
Confidence 987 4544
No 243
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=6.2e-38 Score=316.72 Aligned_cols=243 Identities=23% Similarity=0.335 Sum_probs=191.2
Q ss_pred HHHhcCCCccceeeeecceEEEEEEe-cCCcEEEEEeecccchh------hHHHHHHHHHHHhhC----CCCeeeeeeeE
Q 007668 303 IKKLETLDDDHIIGSGGFGTVYKLAM-DDGNVFALKRIDKLNEG------FDRFFERELEILGSI----KHRYLVNLRGY 371 (594)
Q Consensus 303 ~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l----~h~niv~l~g~ 371 (594)
..-.++|...+.||+|+||.||+|.. .+++.||||++...... ....+.+|++++.++ +||||++++++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 33456799999999999999999976 46889999999753321 123456789999888 89999999999
Q ss_pred EeCCCceEEEEEc-cCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEec-CCCcEEEe
Q 007668 372 CNSPTSKLLIYDF-LPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLD-GNLEARVS 449 (594)
Q Consensus 372 ~~~~~~~~lv~e~-~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~-~~~~~~l~ 449 (594)
+......++|+|| +++++|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+||+++ .++.++|+
T Consensus 107 ~~~~~~~~~v~e~~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl~ 182 (312)
T 2iwi_A 107 FETQEGFMLVLERPLPAQDLFDYITEK-GPLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCAKLI 182 (312)
T ss_dssp C-----CEEEEECCSSEEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTEEEEC
T ss_pred EecCCeEEEEEEecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCeEEEE
Confidence 9999999999999 7899999999764 4699999999999999999999965 999999999999999 88999999
Q ss_pred ecccccccccCCceeeeeeecccCccCccccccCCC-CccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhc
Q 007668 450 DFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRA-TEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLIS 528 (594)
Q Consensus 450 Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 528 (594)
|||++....... .....|+..|+|||++.+..+ +.++||||||+++|||++|+.||...... ..
T Consensus 183 dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------------~~ 247 (312)
T 2iwi_A 183 DFGSGALLHDEP---YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEI------------LE 247 (312)
T ss_dssp CCSSCEECCSSC---BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHH------------HH
T ss_pred EcchhhhcccCc---ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHHH------------hh
Confidence 999998765432 234568999999999887666 45899999999999999999999753210 00
Q ss_pred ccccccccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 529 EDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 529 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
.. . ..+......+.+++.+||+.||++|||++|+++
T Consensus 248 -~~--~-------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 248 -AE--L-------HFPAHVSPDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp -TC--C-------CCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred -hc--c-------CCcccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00 0 011223467899999999999999999999986
No 244
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=9.5e-38 Score=316.48 Aligned_cols=240 Identities=25% Similarity=0.371 Sum_probs=197.5
Q ss_pred hcCCCccceeeeecceEEEEEEe-cCCcEEEEEeecccchh------hHHHHHHHHHHHhhCC--CCeeeeeeeEEeCCC
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAM-DDGNVFALKRIDKLNEG------FDRFFERELEILGSIK--HRYLVNLRGYCNSPT 376 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~--h~niv~l~g~~~~~~ 376 (594)
.++|...+.||+|+||.||+|.. .+++.||||++...... ..+.+.+|+.++++++ ||||+++++++....
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~ 121 (320)
T 3a99_A 42 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPD 121 (320)
T ss_dssp TTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSS
T ss_pred cCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCC
Confidence 45788899999999999999975 46889999998753221 2245678999999996 599999999999999
Q ss_pred ceEEEEEccCC-CchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEec-CCCcEEEeecccc
Q 007668 377 SKLLIYDFLPG-GSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLD-GNLEARVSDFGLA 454 (594)
Q Consensus 377 ~~~lv~e~~~~-gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~-~~~~~~l~Dfgl~ 454 (594)
..++|+|++.+ ++|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+||+++ +++.+||+|||++
T Consensus 122 ~~~lv~e~~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~ 197 (320)
T 3a99_A 122 SFVLILERPEPVQDLFDFITER-GALQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSG 197 (320)
T ss_dssp EEEEEEECCSSEEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEECCCTTC
T ss_pred cEEEEEEcCCCCccHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHH---CCcEeCCCCHHHEEEeCCCCCEEEeeCccc
Confidence 99999999976 8999999763 568999999999999999999995 4999999999999999 7899999999999
Q ss_pred cccccCCceeeeeeecccCccCccccccCCC-CccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccc
Q 007668 455 KLLEDEESHITTIVAGTFGYLAPEYMQSGRA-TEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQR 533 (594)
Q Consensus 455 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 (594)
....... .....||+.|+|||++.+..+ +.++||||||+++|||++|+.||...... ... .
T Consensus 198 ~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~------------~~~---~ 259 (320)
T 3a99_A 198 ALLKDTV---YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI------------IRG---Q 259 (320)
T ss_dssp EECCSSC---BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHH------------HHC---C
T ss_pred ccccccc---ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhhh------------hcc---c
Confidence 8765432 233568999999999887665 68899999999999999999999753210 000 0
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007668 534 EIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (594)
Q Consensus 534 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 574 (594)
.... ...+..+.+++.+||+.||++|||++|+++
T Consensus 260 ~~~~-------~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 260 VFFR-------QRVSSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp CCCS-------SCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred cccc-------ccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0111 123367899999999999999999999986
No 245
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=2.9e-37 Score=335.26 Aligned_cols=264 Identities=26% Similarity=0.372 Sum_probs=201.1
Q ss_pred hcCCCccceeeeecceEEEEEEec-CCcEEEEEeeccc-chhhHHHHHHHHHHHhhCCCCeeeeeeeEEeC------CCc
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKL-NEGFDRFFERELEILGSIKHRYLVNLRGYCNS------PTS 377 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~------~~~ 377 (594)
..+|...+.||+|+||.||+|... +|+.||||++... .....+.+.+|++++++++||||+++++++.. ...
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 468999999999999999999764 6899999998753 44446679999999999999999999998755 677
Q ss_pred eEEEEEccCCCchhhhhhhcC--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCc---EEEeecc
Q 007668 378 KLLIYDFLPGGSLDEALHERS--EQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLE---ARVSDFG 452 (594)
Q Consensus 378 ~~lv~e~~~~gsL~~~l~~~~--~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~---~~l~Dfg 452 (594)
.++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++. ++|+|||
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs---~gIVHrDLKP~NILl~~~g~~~~vKL~DFG 169 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE---NRIIHRDLKPENIVLQPGPQRLIHKIIDLG 169 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHH---TTBCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHeEeecCCCceeEEEcccc
Confidence 799999999999999998643 358999999999999999999995 49999999999999997665 9999999
Q ss_pred cccccccCCceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccc-
Q 007668 453 LAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDR- 531 (594)
Q Consensus 453 l~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~- 531 (594)
++........ .....||+.|+|||.+.+..++.++||||||+++|||++|..||...... ..|.........
T Consensus 170 ~a~~~~~~~~--~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~-----~~~~~~i~~~~~~ 242 (676)
T 3qa8_A 170 YAKELDQGEL--CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQP-----VQWHGKVREKSNE 242 (676)
T ss_dssp CCCBTTSCCC--CCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHH-----HHSSTTCC-----
T ss_pred cccccccccc--cccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccch-----hhhhhhhhcccch
Confidence 9987654332 23457899999999999999999999999999999999999999753211 111110000000
Q ss_pred -------ccc--ccC---CCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHH-----HHHHHhcc
Q 007668 532 -------QRE--IID---PNCEGVQSESLDALLAVATQCVSSSPDDRPTMHR-----VVQILESE 579 (594)
Q Consensus 532 -------~~~--~~~---~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~e-----v~~~L~~~ 579 (594)
... .+. +.........+..+.+++.+||+.||++|||++| +.+.++..
T Consensus 243 ~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~i 307 (676)
T 3qa8_A 243 HIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSI 307 (676)
T ss_dssp -CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHH
T ss_pred hhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHH
Confidence 000 000 1111244567788999999999999999999977 44455443
No 246
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.9e-36 Score=337.64 Aligned_cols=237 Identities=19% Similarity=0.340 Sum_probs=191.4
Q ss_pred cCCCccceeeeecceEEEEEEec--CCcEEEEEeeccc-chhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCc-----e
Q 007668 307 ETLDDDHIIGSGGFGTVYKLAMD--DGNVFALKRIDKL-NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTS-----K 378 (594)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~--~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-----~ 378 (594)
++|...+.||+|+||.||+|... +++.||||++... .......+.+|++++.+++||||+++++++..... .
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 57888999999999999999875 5899999998653 33445678999999999999999999999977665 6
Q ss_pred EEEEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccc
Q 007668 379 LLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLE 458 (594)
Q Consensus 379 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~ 458 (594)
++||||+++++|.+++.. .+++..++.++.||+.||.|||++ +|+||||||+|||++.+ .+||+|||+++...
T Consensus 160 ~lv~E~~~g~~L~~~~~~---~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~ 232 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKGQ---KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGAVSRIN 232 (681)
T ss_dssp EEEEECCCCEECC----C---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTTCEETT
T ss_pred EEEEEeCCCCcHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecccchhcc
Confidence 999999999999998754 699999999999999999999954 99999999999999976 99999999998765
Q ss_pred cCCceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCC
Q 007668 459 DEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDP 538 (594)
Q Consensus 459 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 538 (594)
.. ....||+.|+|||++.++. +.++||||||+++|+|++|..|+....... + ..
T Consensus 233 ~~-----~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~-------------------~-~~ 286 (681)
T 2pzi_A 233 SF-----GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDG-------------------L-PE 286 (681)
T ss_dssp CC-----SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSS-------------------C-CT
T ss_pred cC-----CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCccccccc-------------------c-cc
Confidence 43 3356899999999987654 899999999999999999998875422110 0 00
Q ss_pred CCCCCCHHHHHHHHHHHHHcccCCCCCCCC-HHHHHHHHhc
Q 007668 539 NCEGVQSESLDALLAVATQCVSSSPDDRPT-MHRVVQILES 578 (594)
Q Consensus 539 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-~~ev~~~L~~ 578 (594)
..........+.+++.+||+.||++||+ ++++...|..
T Consensus 287 --~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~ 325 (681)
T 2pzi_A 287 --DDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTG 325 (681)
T ss_dssp --TCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred --cccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence 0011123367889999999999999995 5666665554
No 247
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=3.7e-36 Score=299.40 Aligned_cols=231 Identities=12% Similarity=0.080 Sum_probs=182.8
Q ss_pred cCCCccceeeeecceEEEEEEecC-CcEEEEEeecccc---hhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEEE
Q 007668 307 ETLDDDHIIGSGGFGTVYKLAMDD-GNVFALKRIDKLN---EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIY 382 (594)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ 382 (594)
.+|...+.||+|+||.||+|.... ++.||||++.... ....+.+.+|++.+.+++||||+++++++.+.+..++||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 468888999999999999998764 8999999997532 333477899999999999999999999999999999999
Q ss_pred EccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccCCc
Q 007668 383 DFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEES 462 (594)
Q Consensus 383 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~~ 462 (594)
||+++++|.+++... ....++.+++.|++.||+|||++ +|+||||||+|||++.++.+||++++
T Consensus 111 e~~~g~~L~~~l~~~---~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~---------- 174 (286)
T 3uqc_A 111 EWIRGGSLQEVADTS---PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA---------- 174 (286)
T ss_dssp ECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCC----------
T ss_pred EecCCCCHHHHHhcC---CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecc----------
Confidence 999999999999542 35667889999999999999964 99999999999999999999997443
Q ss_pred eeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCCCCC-
Q 007668 463 HITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCE- 541 (594)
Q Consensus 463 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 541 (594)
|++ .++.++||||||+++|||++|+.||........... ..........
T Consensus 175 -----------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~------------~~~~~~~~~~~ 224 (286)
T 3uqc_A 175 -----------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAP------------AERDTAGQPIE 224 (286)
T ss_dssp -----------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEE------------CCBCTTSCBCC
T ss_pred -----------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHH------------HHHHhccCCCC
Confidence 333 368899999999999999999999976433211000 0000000000
Q ss_pred --CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccCCCC
Q 007668 542 --GVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVMTPC 584 (594)
Q Consensus 542 --~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~~~~~~~ 584 (594)
......+..+.+++.+||+.||++| |+.|+++.|++......
T Consensus 225 ~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~~ 268 (286)
T 3uqc_A 225 PADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVAD 268 (286)
T ss_dssp HHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC---
T ss_pred hhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccCC
Confidence 0112234678999999999999999 99999999998765443
No 248
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=4.2e-36 Score=314.91 Aligned_cols=238 Identities=16% Similarity=0.186 Sum_probs=178.4
Q ss_pred cCCCccceeeeecceEEEEEEe-cCCcEEEEEeecccch---hhHHHHHHHHHHHhhCCC-Cee---------------e
Q 007668 307 ETLDDDHIIGSGGFGTVYKLAM-DDGNVFALKRIDKLNE---GFDRFFERELEILGSIKH-RYL---------------V 366 (594)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h-~ni---------------v 366 (594)
..|...+.||+|+||.||+|.. .+|+.||||++..... ...+.+.+|+.++..++| +|. +
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 157 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence 4567778999999999999984 5789999999874222 235679999999999987 211 1
Q ss_pred ee------eeEEeC-----CCceEEEEEccCCCchhhhhh------hcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCee
Q 007668 367 NL------RGYCNS-----PTSKLLIYDFLPGGSLDEALH------ERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRII 429 (594)
Q Consensus 367 ~l------~g~~~~-----~~~~~lv~e~~~~gsL~~~l~------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iv 429 (594)
.+ +.++.. ....+++|+++ +++|.+++. .....+++..++.++.||++||+|||+ .+|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ii 233 (413)
T 3dzo_A 158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH---YGLV 233 (413)
T ss_dssp ECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHH---TTEE
T ss_pred ccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHh---CCcc
Confidence 11 111111 22356777755 789999984 223458888999999999999999995 4999
Q ss_pred eCCCCCCCeEecCCCcEEEeecccccccccCCceeeeeeecccCccCcccc----------ccCCCCccchhhhHHHHHH
Q 007668 430 HRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYM----------QSGRATEKTDVYSFGVLVL 499 (594)
Q Consensus 430 H~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~~Dv~s~G~vl~ 499 (594)
||||||+|||++.++.+||+|||+++..... .....| +.|+|||++ .+..++.++|||||||++|
T Consensus 234 HrDiKp~NILl~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~ 308 (413)
T 3dzo_A 234 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIY 308 (413)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHH
T ss_pred cCCcccceEEEecCCeEEEEeccceeecCCc----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHH
Confidence 9999999999999999999999998865432 344567 999999998 5556888999999999999
Q ss_pred HHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 007668 500 EVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVV 573 (594)
Q Consensus 500 elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~ 573 (594)
||++|+.||........ ...++. .... .+..+.+|+.+||+.||++|||+.+++
T Consensus 309 elltg~~Pf~~~~~~~~---------------~~~~~~-~~~~----~~~~~~~li~~~l~~dP~~Rpt~~~~l 362 (413)
T 3dzo_A 309 WIWCADLPNTDDAALGG---------------SEWIFR-SCKN----IPQPVRALLEGFLRYPKEDRLLPLQAM 362 (413)
T ss_dssp HHHHSSCCCCTTGGGSC---------------SGGGGS-SCCC----CCHHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred HHHHCCCCCCCcchhhh---------------HHHHHh-hccc----CCHHHHHHHHHHccCChhhCcCHHHHH
Confidence 99999999976432211 111111 1111 236699999999999999999976664
No 249
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=4.8e-35 Score=293.68 Aligned_cols=232 Identities=21% Similarity=0.321 Sum_probs=179.8
Q ss_pred hcCCCcc-ceeeeecceEEEEEEe-cCCcEEEEEeecccchhhHHHHHHHHHHH-hhCCCCeeeeeeeEEeC----CCce
Q 007668 306 LETLDDD-HIIGSGGFGTVYKLAM-DDGNVFALKRIDKLNEGFDRFFERELEIL-GSIKHRYLVNLRGYCNS----PTSK 378 (594)
Q Consensus 306 ~~~~~~~-~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~l~g~~~~----~~~~ 378 (594)
.++|... +.||+|+||.||++.. .+++.||+|++... ..+.+|++++ +..+||||+++++++.. ....
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 90 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 90 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceE
Confidence 3456555 7899999999999976 46899999998642 3567788887 56699999999999876 6678
Q ss_pred EEEEEccCCCchhhhhhhcC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecC---CCcEEEeecccc
Q 007668 379 LLIYDFLPGGSLDEALHERS-EQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDG---NLEARVSDFGLA 454 (594)
Q Consensus 379 ~lv~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~---~~~~~l~Dfgl~ 454 (594)
++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++. ++.++|+|||++
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a 167 (299)
T 3m2w_A 91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFA 167 (299)
T ss_dssp EEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSTTCCEEECCCTTC
T ss_pred EEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEecCCCCCcEEEeccccc
Confidence 99999999999999998653 469999999999999999999995 49999999999999997 788999999998
Q ss_pred cccccCCceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhccccccc
Q 007668 455 KLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQRE 534 (594)
Q Consensus 455 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 (594)
..... ..++.++||||+|+++|||++|+.||........ .......
T Consensus 168 ~~~~~-----------------------~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~-----------~~~~~~~ 213 (299)
T 3m2w_A 168 KETTG-----------------------EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI-----------SPGMKTR 213 (299)
T ss_dssp EECTT-----------------------CGGGGHHHHHHHHHHHHHHHHSSCSCCC------------------CCSCCS
T ss_pred ccccc-----------------------ccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhh-----------hHHHHHH
Confidence 64331 3467899999999999999999999965432110 0000001
Q ss_pred ccCCCCCCCC----HHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHhccc
Q 007668 535 IIDPNCEGVQ----SESLDALLAVATQCVSSSPDDRPTMHRVVQ--ILESEV 580 (594)
Q Consensus 535 ~~~~~~~~~~----~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~--~L~~~~ 580 (594)
+.... ...+ ...+..+.+++.+||+.||++|||++|+++ .+.+..
T Consensus 214 ~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~~~ 264 (299)
T 3m2w_A 214 IRMGQ-YEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 264 (299)
T ss_dssp SCTTC-CSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTGG
T ss_pred Hhhcc-ccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcChhhcccc
Confidence 11111 1111 123567999999999999999999999997 454443
No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=5.3e-36 Score=305.84 Aligned_cols=241 Identities=18% Similarity=0.197 Sum_probs=184.1
Q ss_pred hcCCCccceeeeecceEEEEEEecCCcEEEEEeecccc--------hhhHHHHHHHHHHHhhCC---------CCeeeee
Q 007668 306 LETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLN--------EGFDRFFERELEILGSIK---------HRYLVNL 368 (594)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~---------h~niv~l 368 (594)
.++|...+.||+|+||+||+|.. +|+.||||++.... ....+.+.+|+++++.++ ||||+++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 45678889999999999999987 68999999997542 223367889999988885 7777766
Q ss_pred eeEE-----------------e-------------CCCceEEEEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHH
Q 007668 369 RGYC-----------------N-------------SPTSKLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLA 418 (594)
Q Consensus 369 ~g~~-----------------~-------------~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~ 418 (594)
.+.+ . +....++||||+++|++.+.+.+ ..+++..+..++.||+.||+
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~--~~~~~~~~~~i~~qi~~aL~ 175 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT--KLSSLATAKSILHQLTASLA 175 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT--TCCCHHHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh--cCCCHHHHHHHHHHHHHHHH
Confidence 6653 2 26788999999999987777754 56899999999999999999
Q ss_pred Hhh-hcCCCCeeeCCCCCCCeEecCCC--------------------cEEEeecccccccccCCceeeeeeecccCccCc
Q 007668 419 YLH-HDCSPRIIHRDIKSSNILLDGNL--------------------EARVSDFGLAKLLEDEESHITTIVAGTFGYLAP 477 (594)
Q Consensus 419 ~LH-~~~~~~ivH~Dlk~~NIll~~~~--------------------~~~l~Dfgl~~~~~~~~~~~~~~~~gt~~y~aP 477 (594)
||| +. +|+||||||+|||++.++ .+||+|||+++..... ...||+.|+||
T Consensus 176 ~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------~~~gt~~y~aP 246 (336)
T 2vuw_A 176 VAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCDVSMDE 246 (336)
T ss_dssp HHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT------EEECCCCTTCS
T ss_pred HHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC------cEEEeecccCh
Confidence 999 65 999999999999999887 8999999999876532 34699999999
Q ss_pred cccccCCCCccchhhhHHHH-HHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCC-CCCCCCHHHHHHHHHHH
Q 007668 478 EYMQSGRATEKTDVYSFGVL-VLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDP-NCEGVQSESLDALLAVA 555 (594)
Q Consensus 478 E~~~~~~~~~~~Dv~s~G~v-l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~l~ 555 (594)
|++.+.. +.++||||+|++ .+++++|..||... .|.......-........ .........+.++.+|+
T Consensus 247 E~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli 316 (336)
T 2vuw_A 247 DLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNV---------LWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFH 316 (336)
T ss_dssp GGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHH---------HHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHH
T ss_pred hhhcCCC-ccceehhhhhCCCCcccccccCCCcch---------hhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHH
Confidence 9998766 899999998776 78888999997431 111111100000000111 11112345778899999
Q ss_pred HHcccCCCCCCCCHHHHH
Q 007668 556 TQCVSSSPDDRPTMHRVV 573 (594)
Q Consensus 556 ~~cl~~dP~~RPs~~ev~ 573 (594)
.+||+.| |++|++
T Consensus 317 ~~~L~~d-----sa~e~l 329 (336)
T 2vuw_A 317 RTMLNFS-----SATDLL 329 (336)
T ss_dssp HHGGGSS-----SHHHHH
T ss_pred HHHhccC-----CHHHHH
Confidence 9999976 888887
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.95 E-value=8.2e-29 Score=268.60 Aligned_cols=184 Identities=18% Similarity=0.125 Sum_probs=129.3
Q ss_pred eeeecceEEEEE-EecCCcEEEEEeeccc----------chhhHHHHHHHHHHHhhC-CCCeeeeeeeEEeCCCceEEEE
Q 007668 315 IGSGGFGTVYKL-AMDDGNVFALKRIDKL----------NEGFDRFFERELEILGSI-KHRYLVNLRGYCNSPTSKLLIY 382 (594)
Q Consensus 315 lG~G~~g~Vy~~-~~~~~~~vavK~~~~~----------~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lv~ 382 (594)
.+.|+.|.+..+ ...-|+.+|+|.+... .+...++|.+|+++|+++ .|+||+++++++.++...||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 455666655543 2335888999998642 122346799999999999 6999999999999999999999
Q ss_pred EccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccCCc
Q 007668 383 DFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEES 462 (594)
Q Consensus 383 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~~ 462 (594)
||++|++|.+.+... +.++.. +|+.||+.||+|+|+ .|||||||||+|||++.++++||+|||+++.......
T Consensus 322 Eyv~G~~L~d~i~~~-~~l~~~---~I~~QIl~AL~ylH~---~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~ 394 (569)
T 4azs_A 322 EKLPGRLLSDMLAAG-EEIDRE---KILGSLLRSLAALEK---QGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCS 394 (569)
T ss_dssp ECCCSEEHHHHHHTT-CCCCHH---HHHHHHHHHHHHHHH---TTCEESCCCGGGEEECTTSCEEECCCTTEESCC---C
T ss_pred ecCCCCcHHHHHHhC-CCCCHH---HHHHHHHHHHHHHHH---CCceeccCchHhEEECCCCCEEEeecccCeeCCCCCc
Confidence 999999999999764 556654 589999999999995 4999999999999999999999999999987654332
Q ss_pred eeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCC
Q 007668 463 HITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRP 507 (594)
Q Consensus 463 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p 507 (594)
.....+||++|+|||++.+ .+..++|+|++|++++++.++..+
T Consensus 395 -~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 395 -WPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp -CSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred -cccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 2344679999999999875 567789999999998888765544
No 252
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.94 E-value=7.6e-27 Score=235.30 Aligned_cols=175 Identities=35% Similarity=0.600 Sum_probs=161.1
Q ss_pred CCCcchHHHHHHHHHhccCCCCCCcCCCCCCCCCCc--cceeEeCCC---CcEEEEEcccCCCCC--CCCccccCcccCC
Q 007668 27 RAINSDGEALLSFRTAVVSSDGFLNQWRPEDPDPCN--WKGVKCDKN---KRVITLSLTNHKLSG--PISADLGKLDQLK 99 (594)
Q Consensus 27 ~~~~~~~~~L~~~k~~~~~~~~~l~~w~~~~~~~c~--w~gv~c~~~---~~l~~L~L~~n~l~~--~~~~~~~~l~~L~ 99 (594)
.|.+.|++||++||+++.++. .+++|.. +.+||. |.||+|+.. .+|+.|+|++|++++ .+|..|.++++|+
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~-~l~~W~~-~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~ 79 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPT-TLSSWLP-TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLN 79 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCG-GGTTCCT-TSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCS
T ss_pred CCCHHHHHHHHHHHHhcCCcc-cccCCCC-CCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCCC
Confidence 477889999999999997665 7899974 578998 999999854 799999999999998 8999999999999
Q ss_pred eeeccc-CccCCCCCCCcCCCCccceeecccccccCCCChhhhCCCCCceEeccCCcCCCCCCccccccCCCcEEEeecc
Q 007668 100 FLNLHS-NNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLDISSNSLSDYIPPSLGKLQRLITFNVSNN 178 (594)
Q Consensus 100 ~L~L~~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N 178 (594)
+|+|++ |.+.+.+|..|.++++|++|+|++|.+++.+|..|..+++|++|+|++|+|++.+|..+..+++|++|+|++|
T Consensus 80 ~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 159 (313)
T 1ogq_A 80 FLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGN 159 (313)
T ss_dssp EEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSS
T ss_pred eeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCC
Confidence 999995 9999999999999999999999999999999999999999999999999999989999999999999999999
Q ss_pred cccccCCCC-cccc-cCCcccccCCCC
Q 007668 179 FLVGAIPSD-GVLT-KFSESSFFGNRG 203 (594)
Q Consensus 179 ~l~~~~~~~-~~l~-~l~~l~l~~N~~ 203 (594)
++++.+|.. ..++ +|+.|++++|+.
T Consensus 160 ~l~~~~p~~l~~l~~~L~~L~L~~N~l 186 (313)
T 1ogq_A 160 RISGAIPDSYGSFSKLFTSMTISRNRL 186 (313)
T ss_dssp CCEEECCGGGGCCCTTCCEEECCSSEE
T ss_pred cccCcCCHHHhhhhhcCcEEECcCCee
Confidence 999777654 6777 999999999974
No 253
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.93 E-value=1.6e-26 Score=249.23 Aligned_cols=184 Identities=17% Similarity=0.196 Sum_probs=145.3
Q ss_pred CccceeeeecceEEEEEEecCCcEEEEEeecccc--------hhhHHHHHHHHHHHhhCCCCeeeeeeeEEeCCCceEEE
Q 007668 310 DDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLN--------EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLI 381 (594)
Q Consensus 310 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv 381 (594)
...+.||+|+||.||++.. .+..+++|+..... ....+.+.+|++++++++||||+++..++......++|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 3467899999999999944 47788888764311 11234589999999999999999777777777888999
Q ss_pred EEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccCC
Q 007668 382 YDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEE 461 (594)
Q Consensus 382 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~ 461 (594)
|||+++++|.+++.. +..++.|+++||+|||+ .+|+||||||+|||++. ++||+|||+++......
T Consensus 418 mE~~~ggsL~~~l~~---------~~~i~~qi~~aL~~LH~---~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~ 483 (540)
T 3en9_A 418 MSYINGKLAKDVIED---------NLDIAYKIGEIVGKLHK---NDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDE 483 (540)
T ss_dssp EECCCSEEHHHHSTT---------CTHHHHHHHHHHHHHHH---TTEECTTCCTTSEEESS--SEEECCCTTCEECCCHH
T ss_pred EECCCCCCHHHHHHH---------HHHHHHHHHHHHHHHHH---CcCccCCCCHHHEEECC--eEEEEECccCEECCCcc
Confidence 999999999999975 56899999999999995 49999999999999998 99999999999876533
Q ss_pred cee------eeeeecccCccCcccccc--CCCCccchhhhHHHHHHHHHhCCCCC
Q 007668 462 SHI------TTIVAGTFGYLAPEYMQS--GRATEKTDVYSFGVLVLEVLSGKRPT 508 (594)
Q Consensus 462 ~~~------~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~s~G~vl~elltg~~p~ 508 (594)
... .....||+.|+|||++.. ..|+...|+|+..+-..+-+.++.+|
T Consensus 484 ~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 484 DKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp HHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred ccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 221 234679999999999986 56788899999999888888877776
No 254
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.89 E-value=5.8e-24 Score=240.35 Aligned_cols=175 Identities=23% Similarity=0.377 Sum_probs=116.0
Q ss_pred hccCCCcchHHHHHHHHHhccCCCCCCcCCCCCCCCCCccceeEeCCCCcEEEEEcccCCCCCC---CC-----------
Q 007668 24 NKSRAINSDGEALLSFRTAVVSSDGFLNQWRPEDPDPCNWKGVKCDKNKRVITLSLTNHKLSGP---IS----------- 89 (594)
Q Consensus 24 ~~~~~~~~~~~~L~~~k~~~~~~~~~l~~w~~~~~~~c~w~gv~c~~~~~l~~L~L~~n~l~~~---~~----------- 89 (594)
+++.+.+.|++||++||+++.++. .+++|. .+.+||.|+||+|+ .++|+.|+|+++.++|. +|
T Consensus 5 ~~~~~~~~~~~all~~k~~~~~~~-~l~~W~-~~~~~C~w~gv~C~-~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~ 81 (768)
T 3rgz_A 5 SPSQSLYREIHQLISFKDVLPDKN-LLPDWS-SNKNPCTFDGVTCR-DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLES 81 (768)
T ss_dssp ---CCHHHHHHHHHHHHTTCSCTT-SSTTCC-TTSCGGGSTTEEEE-TTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCE
T ss_pred ccccCCHHHHHHHHHHHhhCCCcc-cccCCC-CCCCCcCCcceEEC-CCcEEEEECCCCCcCCccCccChhHhccCcccc
Confidence 344456789999999999998877 899997 46799999999998 78999999999999876 44
Q ss_pred ------------ccccCcccCCeeecccCccCCCCCC--CcCCCCccceeecccccccCCCChhh-hCCCCCceEeccCC
Q 007668 90 ------------ADLGKLDQLKFLNLHSNNFYGEIPS--ELGNCTELQGLSLQSNYLSGSIPSEL-GNLSNLLNLDISSN 154 (594)
Q Consensus 90 ------------~~~~~l~~L~~L~L~~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~l~~N 154 (594)
..|+++++|++|+|++|.++|.+|. .++++++|++|+|++|.+++.+|..+ .++++|++|+|++|
T Consensus 82 l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n 161 (768)
T 3rgz_A 82 LFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSAN 161 (768)
T ss_dssp EECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSS
T ss_pred cCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCC
Confidence 4566666777777777777666666 66667777777777776666666544 55666666666666
Q ss_pred cCCCCCCcc---ccccCCCcEEEeecccccccCCCCcccccCCcccccCCC
Q 007668 155 SLSDYIPPS---LGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNR 202 (594)
Q Consensus 155 ~l~~~~~~~---~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~l~~N~ 202 (594)
++++..|.. +.++++|++|++++|.+++..+. ..+++|+.|++++|.
T Consensus 162 ~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-~~l~~L~~L~Ls~n~ 211 (768)
T 3rgz_A 162 SISGANVVGWVLSDGCGELKHLAISGNKISGDVDV-SRCVNLEFLDVSSNN 211 (768)
T ss_dssp CCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBC-TTCTTCCEEECCSSC
T ss_pred ccCCcCChhhhhhccCCCCCEEECCCCcccccCCc-ccCCcCCEEECcCCc
Confidence 665544433 34444444444444444433322 334444444444443
No 255
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.89 E-value=3.6e-23 Score=198.47 Aligned_cols=152 Identities=22% Similarity=0.272 Sum_probs=139.0
Q ss_pred CCCCCCccceeEeCC----------CCcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCcccee
Q 007668 56 EDPDPCNWKGVKCDK----------NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGL 125 (594)
Q Consensus 56 ~~~~~c~w~gv~c~~----------~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 125 (594)
.+...|+|++|.|+. .++|+.|+|++|+|++..|..|.++++|++|+|++|+|+...+..|.++++|++|
T Consensus 14 ~~~~~Cs~~~v~c~~~~l~~ip~~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L 93 (229)
T 3e6j_A 14 PSQCSCSGTTVDCRSKRHASVPAGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVL 93 (229)
T ss_dssp CTTCEEETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCCEEeCCEeEccCCCcCccCCCCCCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEE
Confidence 357889999999964 3589999999999999889999999999999999999996666778999999999
Q ss_pred ecccccccCCCChhhhCCCCCceEeccCCcCCCCCCccccccCCCcEEEeecccccccCCCC-cccccCCcccccCCCCC
Q 007668 126 SLQSNYLSGSIPSELGNLSNLLNLDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSD-GVLTKFSESSFFGNRGL 204 (594)
Q Consensus 126 ~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~l~~l~~l~l~~N~~~ 204 (594)
+|++|+|++..+..|..+++|++|+|++|+|+. +|..+..+++|+.|+|++|+|++.++.. ..+++|+.|++.+|++.
T Consensus 94 ~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~-lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 172 (229)
T 3e6j_A 94 DLGTNQLTVLPSAVFDRLVHLKELFMCCNKLTE-LPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWD 172 (229)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCS-CCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBC
T ss_pred ECCCCcCCccChhHhCcchhhCeEeccCCcccc-cCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCcc
Confidence 999999997777778999999999999999995 8999999999999999999999888754 78999999999999999
Q ss_pred CCCc
Q 007668 205 CGKQ 208 (594)
Q Consensus 205 c~~~ 208 (594)
|+|+
T Consensus 173 c~c~ 176 (229)
T 3e6j_A 173 CECR 176 (229)
T ss_dssp TTBG
T ss_pred CCcc
Confidence 9986
No 256
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.88 E-value=7.4e-23 Score=194.98 Aligned_cols=151 Identities=16% Similarity=0.210 Sum_probs=137.9
Q ss_pred CCccceeEeCC----------CCcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeeccc
Q 007668 60 PCNWKGVKCDK----------NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQS 129 (594)
Q Consensus 60 ~c~w~gv~c~~----------~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 129 (594)
.|.|..|.|.. ..+|+.|+|++|+|++..+..|..+++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 10 ~C~~~~v~c~~~~l~~iP~~l~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~ 89 (220)
T 2v9t_B 10 TCSNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYG 89 (220)
T ss_dssp EEETTEEECTTSCCSSCCSSCCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCS
T ss_pred EECCCEEEcCCCCcCcCCCccCcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCC
Confidence 36788899963 24799999999999977777999999999999999999988899999999999999999
Q ss_pred ccccCCCChhhhCCCCCceEeccCCcCCCCCCccccccCCCcEEEeecccccccCCCC-cccccCCcccccCCCCCCCCc
Q 007668 130 NYLSGSIPSELGNLSNLLNLDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSD-GVLTKFSESSFFGNRGLCGKQ 208 (594)
Q Consensus 130 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~l~~l~~l~l~~N~~~c~~~ 208 (594)
|+|+...+..|..+++|++|+|++|+|+++.|..|..+++|+.|+|++|+|++.++.. ..+++|+.|++++|+|.|+|.
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 169 (220)
T 2v9t_B 90 NKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCH 169 (220)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred CcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCCc
Confidence 9999665666899999999999999999988999999999999999999999998864 789999999999999999988
Q ss_pred cc
Q 007668 209 IN 210 (594)
Q Consensus 209 ~~ 210 (594)
+.
T Consensus 170 l~ 171 (220)
T 2v9t_B 170 LK 171 (220)
T ss_dssp GH
T ss_pred cH
Confidence 64
No 257
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.88 E-value=5.4e-23 Score=203.35 Aligned_cols=151 Identities=12% Similarity=0.089 Sum_probs=120.8
Q ss_pred HHHHHhcCCCccceeeeecceEEEEEEecCCcEEEEEeecccch------------------hhHHHHHHHHHHHhhCCC
Q 007668 301 DIIKKLETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNE------------------GFDRFFERELEILGSIKH 362 (594)
Q Consensus 301 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~E~~~l~~l~h 362 (594)
.+......|...+.||+|+||.||+|...+|+.||+|.++.... .....+.+|++++++++
T Consensus 84 ~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~- 162 (282)
T 1zar_A 84 RLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ- 162 (282)
T ss_dssp HHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT-
T ss_pred HHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc-
Confidence 34444556667799999999999999887899999999864221 12456899999999999
Q ss_pred CeeeeeeeEEeCCCceEEEEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecC
Q 007668 363 RYLVNLRGYCNSPTSKLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDG 442 (594)
Q Consensus 363 ~niv~l~g~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~ 442 (594)
| +++.+++.. ...++||||+++|+|.+ +.. .....++.|++.||.|||+ .+|+||||||+|||++
T Consensus 163 -~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~-------~~~~~i~~qi~~~l~~lH~---~giiHrDlkp~NILl~- 227 (282)
T 1zar_A 163 -G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV-------ENPDEVLDMILEEVAKFYH---RGIVHGDLSQYNVLVS- 227 (282)
T ss_dssp -T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC-------SCHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEEE-
T ss_pred -C-CCcCeEEec-cceEEEEEecCCCcHHH-cch-------hhHHHHHHHHHHHHHHHHH---CCCEeCCCCHHHEEEE-
Confidence 4 666665543 55699999999999999 532 1245799999999999995 4999999999999999
Q ss_pred CCcEEEeecccccccccCCceeeeeeecccCccCccccc
Q 007668 443 NLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQ 481 (594)
Q Consensus 443 ~~~~~l~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 481 (594)
++.++|+|||+++. +..+.|||++.
T Consensus 228 ~~~vkl~DFG~a~~--------------~~~~~a~e~l~ 252 (282)
T 1zar_A 228 EEGIWIIDFPQSVE--------------VGEEGWREILE 252 (282)
T ss_dssp TTEEEECCCTTCEE--------------TTSTTHHHHHH
T ss_pred CCcEEEEECCCCeE--------------CCCCCHHHHHH
Confidence 99999999999863 45578999875
No 258
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.88 E-value=3.9e-23 Score=209.46 Aligned_cols=176 Identities=17% Similarity=0.269 Sum_probs=153.8
Q ss_pred cCCCcchHHHHHHHHHhc-cCCCCCCcCCC---CCCCCCCccceeEeC---------CCCcEEEEEcccCCCCCCCCccc
Q 007668 26 SRAINSDGEALLSFRTAV-VSSDGFLNQWR---PEDPDPCNWKGVKCD---------KNKRVITLSLTNHKLSGPISADL 92 (594)
Q Consensus 26 ~~~~~~~~~~L~~~k~~~-~~~~~~l~~w~---~~~~~~c~w~gv~c~---------~~~~l~~L~L~~n~l~~~~~~~~ 92 (594)
+.+...|.+||++||..+ .++.+++.+|. ....++|.|.|+.|+ ...+|+.|+|++|+|+ .+|..+
T Consensus 22 ~~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l 100 (328)
T 4fcg_A 22 STALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQA 100 (328)
T ss_dssp -CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCG
T ss_pred cccCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhh
Confidence 345678999999999998 45667888994 456789999999995 2478999999999999 788889
Q ss_pred cCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhhCCCCCceEeccCCcCCCCCCccccc------
Q 007668 93 GKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLDISSNSLSDYIPPSLGK------ 166 (594)
Q Consensus 93 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~------ 166 (594)
.++++|++|+|++|.|+ .+|..|.++++|++|+|++|.++ .+|..+.++++|++|+|++|++.+.+|..+..
T Consensus 101 ~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~ 178 (328)
T 4fcg_A 101 FRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGE 178 (328)
T ss_dssp GGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCC
T ss_pred hhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhh
Confidence 99999999999999999 89999999999999999999999 88999999999999999999888888887664
Q ss_pred ---cCCCcEEEeecccccccCCCCcccccCCcccccCCCCC
Q 007668 167 ---LQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNRGL 204 (594)
Q Consensus 167 ---l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~~ 204 (594)
+++|+.|+|++|+|+..+.....+++|+.|++++|+..
T Consensus 179 ~~~l~~L~~L~L~~n~l~~lp~~l~~l~~L~~L~L~~N~l~ 219 (328)
T 4fcg_A 179 HQGLVNLQSLRLEWTGIRSLPASIANLQNLKSLKIRNSPLS 219 (328)
T ss_dssp EEESTTCCEEEEEEECCCCCCGGGGGCTTCCEEEEESSCCC
T ss_pred hccCCCCCEEECcCCCcCcchHhhcCCCCCCEEEccCCCCC
Confidence 99999999999999966656688899999999998754
No 259
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.87 E-value=2.4e-23 Score=234.74 Aligned_cols=171 Identities=24% Similarity=0.277 Sum_probs=149.0
Q ss_pred CcchHHHHHHHHHhccCCCCCCcCCCCCC----CCC--Ccc------------ceeEeCCCCcEEEEEcccCCCCCCCCc
Q 007668 29 INSDGEALLSFRTAVVSSDGFLNQWRPED----PDP--CNW------------KGVKCDKNKRVITLSLTNHKLSGPISA 90 (594)
Q Consensus 29 ~~~~~~~L~~~k~~~~~~~~~l~~w~~~~----~~~--c~w------------~gv~c~~~~~l~~L~L~~n~l~~~~~~ 90 (594)
...|..||++||.++.++ +|+.++ .+| |+| .||+|+...+|+.|+|++|+|+|.+|+
T Consensus 267 ~~~d~~ALl~~k~~l~~~-----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~L~G~ip~ 341 (876)
T 4ecn_A 267 YIKDYKALKAIWEALDGK-----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKGRVPD 341 (876)
T ss_dssp HHHHHHHHHHHHHHTTGG-----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTCCEEEECG
T ss_pred chHHHHHHHHHHHHcCCC-----CCCcCCCcccccCCccccccccccccccCcCceEecCCCCEEEEECccCCCCCcCch
Confidence 457999999999999665 786554 466 999 999998888999999999999999999
Q ss_pred cccCcccCCeeec-ccCccCCC----------------------------------------------------------
Q 007668 91 DLGKLDQLKFLNL-HSNNFYGE---------------------------------------------------------- 111 (594)
Q Consensus 91 ~~~~l~~L~~L~L-~~N~l~~~---------------------------------------------------------- 111 (594)
.|++|++|+.|+| ++|.++|.
T Consensus 342 ~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~~~ 421 (876)
T 4ecn_A 342 AIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKDS 421 (876)
T ss_dssp GGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCCCC
T ss_pred HHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCcccccccccc
Confidence 9999999999999 77765444
Q ss_pred ------------------CCCCcCCCCccceeecccccccC-----------------CCChhhh--CCCCCceEeccCC
Q 007668 112 ------------------IPSELGNCTELQGLSLQSNYLSG-----------------SIPSELG--NLSNLLNLDISSN 154 (594)
Q Consensus 112 ------------------~p~~~~~l~~L~~L~Ls~N~l~~-----------------~~p~~~~--~l~~L~~L~l~~N 154 (594)
+|..|++|++|++|+|++|+|++ .+|..++ ++++|++|+|++|
T Consensus 422 ~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N 501 (876)
T 4ecn_A 422 RISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNC 501 (876)
T ss_dssp CCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESC
T ss_pred ccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCC
Confidence 78889999999999999999997 3898877 9999999999999
Q ss_pred cCCCCCCccccccCCCcEEEeeccc-ccc-cCCC-Cccc-------ccCCcccccCCCCC
Q 007668 155 SLSDYIPPSLGKLQRLITFNVSNNF-LVG-AIPS-DGVL-------TKFSESSFFGNRGL 204 (594)
Q Consensus 155 ~l~~~~~~~~~~l~~L~~l~l~~N~-l~~-~~~~-~~~l-------~~l~~l~l~~N~~~ 204 (594)
++.+.+|..|.++++|+.|+|++|+ +++ .+|. ...+ ++|+.|++++|...
T Consensus 502 ~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~ 561 (876)
T 4ecn_A 502 PNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE 561 (876)
T ss_dssp TTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC
T ss_pred CCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC
Confidence 9999999999999999999999998 887 4443 2444 48999999999865
No 260
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.87 E-value=2.7e-22 Score=191.06 Aligned_cols=151 Identities=19% Similarity=0.234 Sum_probs=136.2
Q ss_pred CCccceeEeCC----------CCcEEEEEcccCCCCCCCC-ccccCcccCCeeecccCccCCCCCCCcCCCCccceeecc
Q 007668 60 PCNWKGVKCDK----------NKRVITLSLTNHKLSGPIS-ADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQ 128 (594)
Q Consensus 60 ~c~w~gv~c~~----------~~~l~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 128 (594)
-|.|..+.|+. ...++.|+|++|+|++..+ ..|.++++|++|+|++|+|++..+..|.++++|++|+|+
T Consensus 10 ~C~~~~l~~s~n~l~~iP~~~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 89 (220)
T 2v70_A 10 RCEGTTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLT 89 (220)
T ss_dssp EEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred EECCCEeEeCCCCcccCccCCCCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECC
Confidence 36788888853 2468899999999997655 468999999999999999998777899999999999999
Q ss_pred cccccCCCChhhhCCCCCceEeccCCcCCCCCCccccccCCCcEEEeecccccccCCCC-cccccCCcccccCCCCCCCC
Q 007668 129 SNYLSGSIPSELGNLSNLLNLDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSD-GVLTKFSESSFFGNRGLCGK 207 (594)
Q Consensus 129 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~l~~l~~l~l~~N~~~c~~ 207 (594)
+|+|++..+..|..+++|++|+|++|+|+++.|..|..+++|+.|+|++|+|++.++.. ..+++|+.|++++|++.|+|
T Consensus 90 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 169 (220)
T 2v70_A 90 SNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNC 169 (220)
T ss_dssp SSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSG
T ss_pred CCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCC
Confidence 99999888888999999999999999999988999999999999999999999997754 88999999999999999998
Q ss_pred ccc
Q 007668 208 QIN 210 (594)
Q Consensus 208 ~~~ 210 (594)
++.
T Consensus 170 ~l~ 172 (220)
T 2v70_A 170 YLA 172 (220)
T ss_dssp GGH
T ss_pred chH
Confidence 864
No 261
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.86 E-value=9.7e-23 Score=225.24 Aligned_cols=173 Identities=22% Similarity=0.240 Sum_probs=152.2
Q ss_pred cchHHHHHHHHHhccCCCC--------CCcCCCCCCCCCCcc---ceeEeCCCCcEEEEEcccCCCCCCCCccccCcccC
Q 007668 30 NSDGEALLSFRTAVVSSDG--------FLNQWRPEDPDPCNW---KGVKCDKNKRVITLSLTNHKLSGPISADLGKLDQL 98 (594)
Q Consensus 30 ~~~~~~L~~~k~~~~~~~~--------~l~~w~~~~~~~c~w---~gv~c~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L 98 (594)
..|..||.+++.++.+++. ...+|+. +.+||.| .||+|+..++|+.|+|++|+++|.+|+.|++|++|
T Consensus 29 ~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~-~~~~c~w~~~~GV~C~~~~~V~~L~L~~~~l~g~lp~~l~~L~~L 107 (636)
T 4eco_A 29 IKDYLALKEIWDALNGKNWSQQGFGTQPGANWNF-NKELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVPDAIGQLTEL 107 (636)
T ss_dssp HHHHHHHHHHHHHTTGGGCCCCC------CCCCC-SSCGGGTTCCTTEEECTTCCEEEEECTTSCCEEEECGGGGGCTTC
T ss_pred HHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCC-CCCcccccCCCCeEEcCCCCEEEEEecCcccCCcCChHHhcCccc
Confidence 4689999999999866542 2347984 5899999 99999877899999999999999999999999999
Q ss_pred CeeecccCc-----------------------------------------------------------------------
Q 007668 99 KFLNLHSNN----------------------------------------------------------------------- 107 (594)
Q Consensus 99 ~~L~L~~N~----------------------------------------------------------------------- 107 (594)
++|+|++|.
T Consensus 108 ~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~l~ 187 (636)
T 4eco_A 108 EVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKDTQ 187 (636)
T ss_dssp CEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCCTTT
T ss_pred eEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccchhhhh
Confidence 999999984
Q ss_pred -------cCCCCCCCcCCCCccceeecccccccCC-----------------CChhhh--CCCCCceEeccCCcCCCCCC
Q 007668 108 -------FYGEIPSELGNCTELQGLSLQSNYLSGS-----------------IPSELG--NLSNLLNLDISSNSLSDYIP 161 (594)
Q Consensus 108 -------l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-----------------~p~~~~--~l~~L~~L~l~~N~l~~~~~ 161 (594)
|++ +|..|+++++|++|+|++|.|++. +|..+. ++++|++|+|++|++.+.+|
T Consensus 188 l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p 266 (636)
T 4eco_A 188 IGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLP 266 (636)
T ss_dssp TTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCC
T ss_pred hccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccCh
Confidence 445 888899999999999999999975 999988 99999999999999999999
Q ss_pred ccccccCCCcEEEeeccc-ccc-cCCC-Cccc------ccCCcccccCCCCC
Q 007668 162 PSLGKLQRLITFNVSNNF-LVG-AIPS-DGVL------TKFSESSFFGNRGL 204 (594)
Q Consensus 162 ~~~~~l~~L~~l~l~~N~-l~~-~~~~-~~~l------~~l~~l~l~~N~~~ 204 (594)
..+.++++|++|+|++|+ +++ .+|. ...+ ++|+.|++++|...
T Consensus 267 ~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~ 318 (636)
T 4eco_A 267 TFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK 318 (636)
T ss_dssp TTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS
T ss_pred HHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC
Confidence 999999999999999998 987 4553 3555 89999999999865
No 262
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.86 E-value=1.3e-21 Score=184.68 Aligned_cols=150 Identities=21% Similarity=0.205 Sum_probs=135.5
Q ss_pred CCCccceeEeCC----------CCcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecc
Q 007668 59 DPCNWKGVKCDK----------NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQ 128 (594)
Q Consensus 59 ~~c~w~gv~c~~----------~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 128 (594)
..|.|.+|.|+. .++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|+
T Consensus 5 C~C~~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls 84 (208)
T 2o6s_A 5 CSCSGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLS 84 (208)
T ss_dssp CEEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CEECCCEEEecCCCccCCCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECC
Confidence 347899999964 3579999999999997777789999999999999999997766778999999999999
Q ss_pred cccccCCCChhhhCCCCCceEeccCCcCCCCCCccccccCCCcEEEeecccccccCCCC-cccccCCcccccCCCCCCCC
Q 007668 129 SNYLSGSIPSELGNLSNLLNLDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSD-GVLTKFSESSFFGNRGLCGK 207 (594)
Q Consensus 129 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~l~~l~~l~l~~N~~~c~~ 207 (594)
+|+|++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|+|++.++.. ..+++|+.|++++|++.|.+
T Consensus 85 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 164 (208)
T 2o6s_A 85 TNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTC 164 (208)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCT
T ss_pred CCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecCC
Confidence 99999766677899999999999999999977778999999999999999999888864 78999999999999999987
Q ss_pred c
Q 007668 208 Q 208 (594)
Q Consensus 208 ~ 208 (594)
|
T Consensus 165 ~ 165 (208)
T 2o6s_A 165 P 165 (208)
T ss_dssp T
T ss_pred C
Confidence 7
No 263
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.82 E-value=6.3e-20 Score=178.52 Aligned_cols=136 Identities=24% Similarity=0.276 Sum_probs=114.3
Q ss_pred CCcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhhCCCCCceEe
Q 007668 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLD 150 (594)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 150 (594)
.++|++|+|++|.|++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..|..+++|++|+
T Consensus 58 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 137 (251)
T 3m19_A 58 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELR 137 (251)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEE
Confidence 46788888888888877777788888888888888888877777788888888888888888866666678888899999
Q ss_pred ccCCcCCCCCCccccccCCCcEEEeecccccccCCCC-cccccCCcccccCCCCCCC
Q 007668 151 ISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSD-GVLTKFSESSFFGNRGLCG 206 (594)
Q Consensus 151 l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~l~~l~~l~l~~N~~~c~ 206 (594)
|++|+|+++.+..|..+++|+.|+|++|+|++.++.. ..+++|+.|++++|++.|.
T Consensus 138 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 138 LNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 9999988866667888889999999999998887744 7788899999999998887
No 264
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.81 E-value=2e-20 Score=211.38 Aligned_cols=124 Identities=38% Similarity=0.625 Sum_probs=117.6
Q ss_pred ccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhhCCCCCceEeccCCcCCCCCCccccccCCCc
Q 007668 92 LGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLDISSNSLSDYIPPSLGKLQRLI 171 (594)
Q Consensus 92 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~ 171 (594)
+.++++|++|||++|+++|.+|..|+++++|+.|+|++|+++|.+|..|+++++|+.|||++|+++|.+|..+..+++|+
T Consensus 628 ~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~ 707 (768)
T 3rgz_A 628 FDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLT 707 (768)
T ss_dssp CSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCS
T ss_pred hhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCC
Confidence 33467899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeecccccccCCCCcccccCCcccccCCCCCCCCcccccccCC
Q 007668 172 TFNVSNNFLVGAIPSDGVLTKFSESSFFGNRGLCGKQINVTCKND 216 (594)
Q Consensus 172 ~l~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~~c~~~~~~~c~~~ 216 (594)
+|+|++|+|+|.+|..+.+..+..+++.||+.+||.|++ .|...
T Consensus 708 ~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~-~C~~~ 751 (768)
T 3rgz_A 708 EIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLP-RCDPS 751 (768)
T ss_dssp EEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTSC-CCCSC
T ss_pred EEECcCCcccccCCCchhhccCCHHHhcCCchhcCCCCc-CCCCC
Confidence 999999999999999989999999999999999999988 88643
No 265
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.81 E-value=5.7e-22 Score=211.76 Aligned_cols=146 Identities=23% Similarity=0.267 Sum_probs=119.5
Q ss_pred CCccceeEeCCCCcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcC-CCCccceeecccccccCCCCh
Q 007668 60 PCNWKGVKCDKNKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELG-NCTELQGLSLQSNYLSGSIPS 138 (594)
Q Consensus 60 ~c~w~gv~c~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~ 138 (594)
.|.+.++.|...++|+.|+|++|.|++..|..|+++++|++|+|++|.|++.+|..+. .+++|+.|+|++|.|++. |.
T Consensus 108 ~N~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~~ 186 (487)
T 3oja_A 108 NNNISRVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG 186 (487)
T ss_dssp SSCCCCEEECCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC
T ss_pred CCcCCCCCccccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc-cc
Confidence 3566777777778888889999988887788888888999999999998887777775 788899999999988854 33
Q ss_pred hhhCCCCCceEeccCCcCCCCCCccccccCCCcEEEeecccccccCCCCcccccCCcccccCCCCCCCCc
Q 007668 139 ELGNLSNLLNLDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNRGLCGKQ 208 (594)
Q Consensus 139 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~~c~~~ 208 (594)
+..+++|+.|+|++|.|++ +|..+..+++|+.|+|++|+|+++++....+++|+.|++++|++.|++.
T Consensus 187 -~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~~lp~~l~~l~~L~~L~l~~N~l~c~~~ 254 (487)
T 3oja_A 187 -QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVLIEKALRFSQNLEHFDLRGNGFHCGTL 254 (487)
T ss_dssp -CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCEECTTCCCCTTCCEEECTTCCBCHHHH
T ss_pred -cccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEEecCCcCcccchhhccCCCCCEEEcCCCCCcCcch
Confidence 3458889999999999987 5556888889999999999998877777788888999999998887644
No 266
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.81 E-value=8.3e-20 Score=177.65 Aligned_cols=133 Identities=23% Similarity=0.222 Sum_probs=121.7
Q ss_pred CcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhhCCCCCceEec
Q 007668 72 KRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLDI 151 (594)
Q Consensus 72 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 151 (594)
.+++.|+|++|+|++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|
T Consensus 35 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 114 (251)
T 3m19_A 35 ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYL 114 (251)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEc
Confidence 57899999999999888889999999999999999999888888999999999999999999777788899999999999
Q ss_pred cCCcCCCCCCccccccCCCcEEEeecccccccCCC-CcccccCCcccccCCCCC
Q 007668 152 SSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPS-DGVLTKFSESSFFGNRGL 204 (594)
Q Consensus 152 ~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l~~l~~l~l~~N~~~ 204 (594)
++|+|+++.+..|..+++|+.|+|++|+|++.++. ...+++|+.|++++|+..
T Consensus 115 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 168 (251)
T 3m19_A 115 GGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQ 168 (251)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS
T ss_pred CCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCC
Confidence 99999987777789999999999999999988885 478999999999999754
No 267
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.81 E-value=1e-19 Score=180.81 Aligned_cols=139 Identities=24% Similarity=0.186 Sum_probs=126.4
Q ss_pred CCCcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhhCCCCCceE
Q 007668 70 KNKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNL 149 (594)
Q Consensus 70 ~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 149 (594)
..++|++|+|++|+|+ .+|..+.++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|
T Consensus 75 ~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 153 (290)
T 1p9a_G 75 TLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKL 153 (290)
T ss_dssp CCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEE
Confidence 3578999999999999 788889999999999999999997777889999999999999999997777778999999999
Q ss_pred eccCCcCCCCCCccccccCCCcEEEeecccccccCCCCcccccCCcccccCCCCCCCCcc
Q 007668 150 DISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNRGLCGKQI 209 (594)
Q Consensus 150 ~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~~c~~~~ 209 (594)
+|++|+|+++.+..|..+++|+.|+|++|+|+.+++....+.+|+.+++++|||.|+|.+
T Consensus 154 ~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~ip~~~~~~~~L~~l~L~~Np~~C~c~~ 213 (290)
T 1p9a_G 154 SLANNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWLCNCEI 213 (290)
T ss_dssp ECTTSCCSCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSCCBCCSGGG
T ss_pred ECCCCcCCccCHHHhcCcCCCCEEECCCCcCCccChhhcccccCCeEEeCCCCccCcCcc
Confidence 999999998767778899999999999999998888778888999999999999999865
No 268
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.81 E-value=9.5e-20 Score=169.53 Aligned_cols=132 Identities=22% Similarity=0.274 Sum_probs=120.5
Q ss_pred EEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhhCCCCCceEeccCC
Q 007668 75 ITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLDISSN 154 (594)
Q Consensus 75 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N 154 (594)
+.+++++|+|+ .+|..+. ++|++|+|++|+|+ .+|..|.++++|+.|+|++|.|++..+..|.++++|++|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 36788899999 6776653 69999999999999 88899999999999999999999887888999999999999999
Q ss_pred cCCCCCCccccccCCCcEEEeecccccccCCCC-cccccCCcccccCCCCCCCCccc
Q 007668 155 SLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSD-GVLTKFSESSFFGNRGLCGKQIN 210 (594)
Q Consensus 155 ~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~l~~l~~l~l~~N~~~c~~~~~ 210 (594)
+|+++.|..|..+++|+.|+|++|+|++.++.. ..+++|+.|++++|+|.|+|.+.
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~l~ 145 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQ 145 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGGGH
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCcCH
Confidence 999988889999999999999999999888864 78999999999999999998864
No 269
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.81 E-value=8e-20 Score=170.02 Aligned_cols=133 Identities=21% Similarity=0.275 Sum_probs=116.1
Q ss_pred EEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCC-CcCCCCccceeecccccccCCCChhhhCCCCCceEeccC
Q 007668 75 ITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPS-ELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLDISS 153 (594)
Q Consensus 75 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~ 153 (594)
+.|++++|+|+ .+|..+.. +|++|+|++|+|++..+. .|..+++|++|+|++|+|++..|..|..+++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 46788889997 67776644 899999999999966554 489999999999999999988899999999999999999
Q ss_pred CcCCCCCCccccccCCCcEEEeecccccccCCCC-cccccCCcccccCCCCCCCCccc
Q 007668 154 NSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSD-GVLTKFSESSFFGNRGLCGKQIN 210 (594)
Q Consensus 154 N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~l~~l~~l~l~~N~~~c~~~~~ 210 (594)
|+|++..+..|..+++|++|+|++|+|++.++.. ..+++|+.|++++|++.|++++.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~ 145 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLA 145 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGH
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcch
Confidence 9999988888999999999999999999987765 78999999999999999998863
No 270
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.80 E-value=2e-19 Score=177.17 Aligned_cols=139 Identities=24% Similarity=0.203 Sum_probs=125.9
Q ss_pred CCCcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhhCCCCCceE
Q 007668 70 KNKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNL 149 (594)
Q Consensus 70 ~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 149 (594)
..++|++|+|++|.|++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++|+.|
T Consensus 83 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 162 (272)
T 3rfs_A 83 ELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTEL 162 (272)
T ss_dssp TCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEE
Confidence 45789999999999998777888999999999999999997777778999999999999999997777778999999999
Q ss_pred eccCCcCCCCCCccccccCCCcEEEeecccccccCCCC-cccccCCcccccCCCCCCCCc
Q 007668 150 DISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSD-GVLTKFSESSFFGNRGLCGKQ 208 (594)
Q Consensus 150 ~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~l~~l~~l~l~~N~~~c~~~ 208 (594)
+|++|+|++..+..+..+++|+.|+|++|++++.++.. ..+++|+.|++++|++.|.+|
T Consensus 163 ~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 222 (272)
T 3rfs_A 163 DLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 222 (272)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred ECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccCc
Confidence 99999999877778899999999999999999988865 789999999999999999877
No 271
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.80 E-value=2.8e-20 Score=187.22 Aligned_cols=138 Identities=30% Similarity=0.528 Sum_probs=112.8
Q ss_pred cEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhhCCCCCceEecc
Q 007668 73 RVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLDIS 152 (594)
Q Consensus 73 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 152 (594)
+|+.|+|++|.+++.+|..+..++ |++|+|++|++++.+|..|..+++|+.|+|++|.+++.+|. +..+++|++|+|+
T Consensus 175 ~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls 252 (313)
T 1ogq_A 175 LFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLR 252 (313)
T ss_dssp TCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECC
T ss_pred cCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECc
Confidence 556666666666655666666655 66666666666666777777788888888888888865555 7788999999999
Q ss_pred CCcCCCCCCccccccCCCcEEEeecccccccCCCCcccccCCcccccCCCCCCCCcccccc
Q 007668 153 SNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNRGLCGKQINVTC 213 (594)
Q Consensus 153 ~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~~c~~~~~~~c 213 (594)
+|+|++.+|..+..+++|+.|+|++|++++.+|....+++|+.+++.+|+++||.|++ .|
T Consensus 253 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~l~~L~~l~l~~N~~lc~~p~~-~C 312 (313)
T 1ogq_A 253 NNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSPLP-AC 312 (313)
T ss_dssp SSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEESTTSS-CC
T ss_pred CCcccCcCChHHhcCcCCCEEECcCCcccccCCCCccccccChHHhcCCCCccCCCCC-CC
Confidence 9999988999999999999999999999999998889999999999999999999887 45
No 272
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.80 E-value=3.1e-20 Score=172.86 Aligned_cols=151 Identities=23% Similarity=0.301 Sum_probs=128.9
Q ss_pred CCccceeEeCC----------CCcEEEEEcccCCCCCCCCc-cccCcccCCeeecccCccCCCCCCCcCCCCccceeecc
Q 007668 60 PCNWKGVKCDK----------NKRVITLSLTNHKLSGPISA-DLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQ 128 (594)
Q Consensus 60 ~c~w~gv~c~~----------~~~l~~L~L~~n~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 128 (594)
.|.|+.+.|+. ..+++.|+|++|+|++..+. .|.++++|++|+|++|+|++..|..|.++++|++|+|+
T Consensus 7 ~C~~~~l~~s~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 86 (192)
T 1w8a_A 7 HCEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLG 86 (192)
T ss_dssp EEETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred EECCCEEEcCCCCcCcCccCCCCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECC
Confidence 36788888863 24899999999999966664 59999999999999999998889999999999999999
Q ss_pred cccccCCCChhhhCCCCCceEeccCCcCCCCCCccccccCCCcEEEeecccccccCCCCcccccCCcccccCCCCCCCCc
Q 007668 129 SNYLSGSIPSELGNLSNLLNLDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNRGLCGKQ 208 (594)
Q Consensus 129 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~~c~~~ 208 (594)
+|+|++..|..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|++++..+.......++...+.++...|+.|
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~P 166 (192)
T 1w8a_A 87 ENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAP 166 (192)
T ss_dssp SCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCSS
T ss_pred CCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCCC
Confidence 99999888888999999999999999999988999999999999999999999876533222234445667777788776
Q ss_pred cc
Q 007668 209 IN 210 (594)
Q Consensus 209 ~~ 210 (594)
..
T Consensus 167 ~~ 168 (192)
T 1w8a_A 167 SK 168 (192)
T ss_dssp TT
T ss_pred hH
Confidence 54
No 273
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.79 E-value=3.6e-19 Score=175.13 Aligned_cols=138 Identities=25% Similarity=0.216 Sum_probs=108.5
Q ss_pred CCcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhhCCCCCceEe
Q 007668 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLD 150 (594)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 150 (594)
.++|++|+|++|.|++..+..|.++++|++|+|++|++++..|..|..+++|++|+|++|.|++..+..|..+++|+.|+
T Consensus 84 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 163 (270)
T 2o6q_A 84 LKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELR 163 (270)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeE
Confidence 45677777777777766666677778888888888888766666778888888888888888855555678888888888
Q ss_pred ccCCcCCCCCCccccccCCCcEEEeecccccccCCCC-cccccCCcccccCCCCCCCCc
Q 007668 151 ISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSD-GVLTKFSESSFFGNRGLCGKQ 208 (594)
Q Consensus 151 l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~l~~l~~l~l~~N~~~c~~~ 208 (594)
|++|+|+++.+..|..+++|+.|+|++|+|++.++.. ..+++|+.|++++|+|.|+|+
T Consensus 164 L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 222 (270)
T 2o6q_A 164 LYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCN 222 (270)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSSS
T ss_pred ecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCCc
Confidence 8888888766667888888888888888888777654 678888888888888888775
No 274
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.78 E-value=7e-19 Score=173.05 Aligned_cols=132 Identities=23% Similarity=0.258 Sum_probs=100.9
Q ss_pred CcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhhCCCCCceEec
Q 007668 72 KRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLDI 151 (594)
Q Consensus 72 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 151 (594)
.+++.|+|++|+|++..+..|.++++|++|+|++|+|+...+..|.++++|++|+|++|++++..+..|..+++|++|+|
T Consensus 37 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 116 (270)
T 2o6q_A 37 ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRL 116 (270)
T ss_dssp TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEEC
T ss_pred CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEEC
Confidence 35777888888888666667888888888888888887555555677888888888888888655666777888888888
Q ss_pred cCCcCCCCCCccccccCCCcEEEeecccccccCCCC-cccccCCcccccCCCC
Q 007668 152 SSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSD-GVLTKFSESSFFGNRG 203 (594)
Q Consensus 152 ~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~l~~l~~l~l~~N~~ 203 (594)
++|+|++..+..|..+++|++|+|++|+|++.++.. ..+++|+.|++++|..
T Consensus 117 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l 169 (270)
T 2o6q_A 117 DRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQL 169 (270)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred CCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcC
Confidence 888888766777778888888888888888776653 6778888888887764
No 275
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.78 E-value=1.4e-19 Score=176.63 Aligned_cols=137 Identities=20% Similarity=0.197 Sum_probs=105.2
Q ss_pred CCccceeeeecceEEEEEEe-cCCcE--EEEEeecccchh------------------------hHHHHHHHHHHHhhCC
Q 007668 309 LDDDHIIGSGGFGTVYKLAM-DDGNV--FALKRIDKLNEG------------------------FDRFFERELEILGSIK 361 (594)
Q Consensus 309 ~~~~~~lG~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~------------------------~~~~~~~E~~~l~~l~ 361 (594)
|...+.||+|+||.||+|.. .+|+. ||||+++..... ....+.+|++.+.+++
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 45678999999999999987 68888 999987542111 1236888999999998
Q ss_pred CCee--eeeeeEEeCCCceEEEEEccCC-C----chhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhh-hcCCCCeeeCCC
Q 007668 362 HRYL--VNLRGYCNSPTSKLLIYDFLPG-G----SLDEALHERSEQLDWDARLNIIMGAAKGLAYLH-HDCSPRIIHRDI 433 (594)
Q Consensus 362 h~ni--v~l~g~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH-~~~~~~ivH~Dl 433 (594)
|+++ ..++++ ...++||||+.+ | +|.+.... .++..+..++.|++.||.||| +. +|+||||
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~----~~~~~~~~i~~qi~~~l~~lH~~~---givHrDl 197 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE----LKELDVEGIFNDVVENVKRLYQEA---ELVHADL 197 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG----GGGSCHHHHHHHHHHHHHHHHHTS---CEECSSC
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc----cChHHHHHHHHHHHHHHHHHHHHC---CEEeCCC
Confidence 8754 333332 356899999942 4 56655432 234457789999999999999 54 9999999
Q ss_pred CCCCeEecCCCcEEEeecccccccc
Q 007668 434 KSSNILLDGNLEARVSDFGLAKLLE 458 (594)
Q Consensus 434 k~~NIll~~~~~~~l~Dfgl~~~~~ 458 (594)
||.|||++. .++|+|||++....
T Consensus 198 kp~NILl~~--~~~liDFG~a~~~~ 220 (258)
T 1zth_A 198 SEYNIMYID--KVYFIDMGQAVTLR 220 (258)
T ss_dssp STTSEEESS--SEEECCCTTCEETT
T ss_pred CHHHEEEcC--cEEEEECcccccCC
Confidence 999999998 99999999997543
No 276
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.77 E-value=1.1e-18 Score=160.05 Aligned_cols=129 Identities=19% Similarity=0.191 Sum_probs=109.2
Q ss_pred EEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhhCCCCCceEeccCCcC
Q 007668 77 LSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLDISSNSL 156 (594)
Q Consensus 77 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l 156 (594)
+++++|+++ .+|..+ .++|+.|+|++|++++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|++|+|
T Consensus 12 l~~~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l 88 (177)
T 2o6r_A 12 IRCNSKGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKL 88 (177)
T ss_dssp EECCSSCCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EEecCCCCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCc
Confidence 344567777 555444 37899999999999977777789999999999999999966667789999999999999999
Q ss_pred CCCCCccccccCCCcEEEeecccccccCCCC-cccccCCcccccCCCCCCCCc
Q 007668 157 SDYIPPSLGKLQRLITFNVSNNFLVGAIPSD-GVLTKFSESSFFGNRGLCGKQ 208 (594)
Q Consensus 157 ~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~l~~l~~l~l~~N~~~c~~~ 208 (594)
++..+..+..+++|+.|+|++|+|++.++.. ..+++|+.|++++|++.|.++
T Consensus 89 ~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 89 QSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred cccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 9877777899999999999999999888765 678999999999999999876
No 277
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.77 E-value=4.5e-19 Score=175.95 Aligned_cols=140 Identities=21% Similarity=0.193 Sum_probs=105.1
Q ss_pred CCcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhhCCCCCceEe
Q 007668 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLD 150 (594)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 150 (594)
.++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+
T Consensus 104 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 183 (285)
T 1ozn_A 104 LGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLL 183 (285)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred CcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEE
Confidence 35677777777777766666777777777777777777755555677777777777777777755555677777888888
Q ss_pred ccCCcCCCCCCccccccCCCcEEEeecccccccCCC-CcccccCCcccccCCCCCCCCccc
Q 007668 151 ISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPS-DGVLTKFSESSFFGNRGLCGKQIN 210 (594)
Q Consensus 151 l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l~~l~~l~l~~N~~~c~~~~~ 210 (594)
|++|+|++..|..|..+++|+.|+|++|++++.++. ...+++|+.|++++|++.|+|++.
T Consensus 184 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~ 244 (285)
T 1ozn_A 184 LHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRAR 244 (285)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGH
T ss_pred CCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcH
Confidence 888888776777788888888888888888876654 367788888888888888887753
No 278
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.77 E-value=2.9e-19 Score=183.52 Aligned_cols=138 Identities=20% Similarity=0.215 Sum_probs=73.9
Q ss_pred CcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhhCCCCCceEec
Q 007668 72 KRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLDI 151 (594)
Q Consensus 72 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 151 (594)
.+|+.|+|++|+|++..+..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+|++..|..|..+++|+.|+|
T Consensus 64 ~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L 143 (361)
T 2xot_A 64 TNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYL 143 (361)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred cccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEEC
Confidence 44555555555555444444555555555555555555444444555555555555555555444555555555555555
Q ss_pred cCCcCCCCCCccc---cccCCCcEEEeecccccccCCCC-ccccc--CCcccccCCCCCCCCcc
Q 007668 152 SSNSLSDYIPPSL---GKLQRLITFNVSNNFLVGAIPSD-GVLTK--FSESSFFGNRGLCGKQI 209 (594)
Q Consensus 152 ~~N~l~~~~~~~~---~~l~~L~~l~l~~N~l~~~~~~~-~~l~~--l~~l~l~~N~~~c~~~~ 209 (594)
++|+|+++.+..| ..+++|+.|+|++|+|++.++.. ..+++ ++.|++.+|+|.|+|.+
T Consensus 144 ~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C~C~l 207 (361)
T 2xot_A 144 SQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLECDCKL 207 (361)
T ss_dssp CSSCCCSCCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEECCHHH
T ss_pred CCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccCCcCc
Confidence 5555554222223 34555555555555555444321 33333 36788888888888865
No 279
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.75 E-value=1.3e-18 Score=184.56 Aligned_cols=137 Identities=22% Similarity=0.187 Sum_probs=130.7
Q ss_pred CcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhhCCCCCceEec
Q 007668 72 KRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLDI 151 (594)
Q Consensus 72 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 151 (594)
.+|+.|+|++|.+++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++|.+++..|..|..+++|++|+|
T Consensus 275 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 354 (455)
T 3v47_A 275 SGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDL 354 (455)
T ss_dssp SCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEEC
T ss_pred cCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEEC
Confidence 58999999999999989999999999999999999999888999999999999999999999888899999999999999
Q ss_pred cCCcCCCCCCccccccCCCcEEEeecccccccCCCC-cccccCCcccccCCCCCCCCc
Q 007668 152 SSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSD-GVLTKFSESSFFGNRGLCGKQ 208 (594)
Q Consensus 152 ~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~l~~l~~l~l~~N~~~c~~~ 208 (594)
++|+|++..|..|..+++|++|+|++|+|++.++.. ..+++|+.|++++|++.|+||
T Consensus 355 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 355 SYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 999999988999999999999999999999988765 789999999999999999998
No 280
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.75 E-value=2.3e-18 Score=190.40 Aligned_cols=134 Identities=19% Similarity=0.175 Sum_probs=121.9
Q ss_pred CCcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhhCCCCCceEe
Q 007668 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLD 150 (594)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 150 (594)
+.++++|+|++|+|++..+..|.++++|++|+|++|+|++..|..|.+|++|++|+|++|+|++..+..|.++++|++|+
T Consensus 51 p~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~ 130 (635)
T 4g8a_A 51 PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 130 (635)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEE
T ss_pred CcCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEE
Confidence 35899999999999977778999999999999999999977788899999999999999999976777899999999999
Q ss_pred ccCCcCCCCCCccccccCCCcEEEeecccccccC-CCC-cccccCCcccccCCCCC
Q 007668 151 ISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAI-PSD-GVLTKFSESSFFGNRGL 204 (594)
Q Consensus 151 l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~-~~~-~~l~~l~~l~l~~N~~~ 204 (594)
|++|+|+++.+..|.++++|++|+|++|.+++.. |.. ..+++|+.|++++|+..
T Consensus 131 Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~ 186 (635)
T 4g8a_A 131 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQ 186 (635)
T ss_dssp CTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCC
T ss_pred CCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCcccc
Confidence 9999999977788999999999999999998753 333 77999999999999864
No 281
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.74 E-value=2.3e-18 Score=172.58 Aligned_cols=139 Identities=18% Similarity=0.211 Sum_probs=101.6
Q ss_pred CCcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCC-CCCCCcCCCCccceeecccccccCCCChhhhCCCCCceE
Q 007668 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYG-EIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNL 149 (594)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 149 (594)
.++|+.|+|++|.+++..+..|.++++|++|+|++|.+++ .+|..|..+++|++|+|++|.+++..|..|..+++|++|
T Consensus 125 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 204 (306)
T 2z66_A 125 LRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVL 204 (306)
T ss_dssp CTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred ccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEE
Confidence 3567777777777776666677777777777777777765 467777777777777777777776667777777777777
Q ss_pred eccCCcCCCCCCccccccCCCcEEEeecccccccCCCC-ccc-ccCCcccccCCCCCCCCcc
Q 007668 150 DISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSD-GVL-TKFSESSFFGNRGLCGKQI 209 (594)
Q Consensus 150 ~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~l-~~l~~l~l~~N~~~c~~~~ 209 (594)
+|++|+|++..+..+..+++|+.|+|++|++++.++.. ..+ ++|+.|++++|++.|+|++
T Consensus 205 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~ 266 (306)
T 2z66_A 205 NMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEH 266 (306)
T ss_dssp ECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGG
T ss_pred ECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccCh
Confidence 77777777766667777777888888888877766644 555 3778888888887777664
No 282
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.74 E-value=2.9e-18 Score=155.86 Aligned_cols=131 Identities=24% Similarity=0.273 Sum_probs=119.4
Q ss_pred CCcEEEEEcccCCCC-CCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhhCCCCCceE
Q 007668 71 NKRVITLSLTNHKLS-GPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNL 149 (594)
Q Consensus 71 ~~~l~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 149 (594)
.++|+.|+|++|+++ +.+|..+..+++|++|+|++|.|++. ..|..+++|++|+|++|++++.+|..+..+++|++|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 468999999999998 78899999999999999999999955 789999999999999999997789988889999999
Q ss_pred eccCCcCCCCCC-ccccccCCCcEEEeecccccccCC----CCcccccCCcccccCCCC
Q 007668 150 DISSNSLSDYIP-PSLGKLQRLITFNVSNNFLVGAIP----SDGVLTKFSESSFFGNRG 203 (594)
Q Consensus 150 ~l~~N~l~~~~~-~~~~~l~~L~~l~l~~N~l~~~~~----~~~~l~~l~~l~l~~N~~ 203 (594)
+|++|+|++..+ ..+..+++|+.|+|++|++++.++ ....+++|+.|++++|+.
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~ 159 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDRED 159 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTS
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCCh
Confidence 999999998432 789999999999999999998887 457899999999999974
No 283
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.74 E-value=1.9e-18 Score=160.65 Aligned_cols=124 Identities=22% Similarity=0.296 Sum_probs=111.5
Q ss_pred CCccceeEeCC----------CCcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeeccc
Q 007668 60 PCNWKGVKCDK----------NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQS 129 (594)
Q Consensus 60 ~c~w~gv~c~~----------~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 129 (594)
.|.|..+.|+. .++|++|+|++|+|+ .+|..|.++++|++|+|++|+|++..+..|.++++|++|+|++
T Consensus 9 ~C~~~~l~~~~~~l~~ip~~~~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~ 87 (193)
T 2wfh_A 9 TCLDTVVRCSNKGLKVLPKGIPRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSY 87 (193)
T ss_dssp EEETTEEECTTSCCSSCCSCCCTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred EeCCCEEEcCCCCCCcCCCCCCCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCC
Confidence 35666777753 358999999999999 7889999999999999999999988888899999999999999
Q ss_pred ccccCCCChhhhCCCCCceEeccCCcCCCCCCccccccCCCcEEEeecccccccC
Q 007668 130 NYLSGSIPSELGNLSNLLNLDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAI 184 (594)
Q Consensus 130 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~ 184 (594)
|+|++..|..|..+++|+.|+|++|+|+.+.+..|..+++|+.|+|++|++....
T Consensus 88 N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c 142 (193)
T 2wfh_A 88 NRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDC 142 (193)
T ss_dssp SCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred CccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCC
Confidence 9999888888999999999999999999877778999999999999999998643
No 284
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.72 E-value=4.2e-18 Score=151.43 Aligned_cols=128 Identities=21% Similarity=0.273 Sum_probs=115.9
Q ss_pred CCcEEEEEcccCCCC-CCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhhCCCCCceE
Q 007668 71 NKRVITLSLTNHKLS-GPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNL 149 (594)
Q Consensus 71 ~~~l~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 149 (594)
.++|+.|++++|.++ +.+|..+..+++|++|+|++|++++. ..+..+++|++|+|++|.+++.+|..+..+++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 368999999999999 88999999999999999999999965 689999999999999999997799988899999999
Q ss_pred eccCCcCCCC-CCccccccCCCcEEEeecccccccCC----CCcccccCCcccccC
Q 007668 150 DISSNSLSDY-IPPSLGKLQRLITFNVSNNFLVGAIP----SDGVLTKFSESSFFG 200 (594)
Q Consensus 150 ~l~~N~l~~~-~~~~~~~l~~L~~l~l~~N~l~~~~~----~~~~l~~l~~l~l~~ 200 (594)
+|++|+|++. .+..+..+++|+.|++++|++++.++ ....+++|+.|++++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 9999999983 34889999999999999999998877 347889999998864
No 285
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.72 E-value=8.3e-18 Score=165.92 Aligned_cols=138 Identities=23% Similarity=0.241 Sum_probs=94.1
Q ss_pred CCcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCC-CChhhhCCCCCceE
Q 007668 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGS-IPSELGNLSNLLNL 149 (594)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L 149 (594)
.++|++|+|++|.|++..+..|.++++|++|+|++|++++..+..+..+++|++|+|++|.+++. +|..|..+++|++|
T Consensus 75 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L 154 (276)
T 2z62_A 75 LSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHL 154 (276)
T ss_dssp CTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEE
T ss_pred CcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEE
Confidence 35666777777777655556666677777777777776655555666777777777777777642 46667777777777
Q ss_pred eccCCcCCCCCCcccccc---------------------------CCCcEEEeecccccccCCCC-cccccCCcccccCC
Q 007668 150 DISSNSLSDYIPPSLGKL---------------------------QRLITFNVSNNFLVGAIPSD-GVLTKFSESSFFGN 201 (594)
Q Consensus 150 ~l~~N~l~~~~~~~~~~l---------------------------~~L~~l~l~~N~l~~~~~~~-~~l~~l~~l~l~~N 201 (594)
+|++|+|++..+..+..+ .+|+.|+|++|+|++.++.. ..+++|+.|++++|
T Consensus 155 ~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N 234 (276)
T 2z62_A 155 DLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTN 234 (276)
T ss_dssp ECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCSCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSS
T ss_pred ECCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccCCCcccEEECCCCceeecCHhHhcccccccEEEccCC
Confidence 777777665443333222 25777777778887776654 67888888889999
Q ss_pred CCCCCCc
Q 007668 202 RGLCGKQ 208 (594)
Q Consensus 202 ~~~c~~~ 208 (594)
++.|+|+
T Consensus 235 ~~~c~c~ 241 (276)
T 2z62_A 235 PWDCSCP 241 (276)
T ss_dssp CBCCCTT
T ss_pred cccccCC
Confidence 8888876
No 286
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.72 E-value=7.7e-18 Score=186.14 Aligned_cols=140 Identities=18% Similarity=0.212 Sum_probs=128.9
Q ss_pred CCcEEEEEcccCCCCCCCCccccCcccCCeeecccCcc-CCCCCCCcCCCCccceeecccccccCCCChhhhCCCCCceE
Q 007668 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNF-YGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNL 149 (594)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l-~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 149 (594)
..+++.++++.|.+++..+..+..+++|+.|+|++|++ .+.+|..|..+++|++|+|++|+|++..|..|.++++|++|
T Consensus 444 l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L 523 (635)
T 4g8a_A 444 LRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVL 523 (635)
T ss_dssp CTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred ccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEE
Confidence 46788999999999988899999999999999999985 44688899999999999999999998889999999999999
Q ss_pred eccCCcCCCCCCccccccCCCcEEEeecccccccCCCC-ccc-ccCCcccccCCCCCCCCccc
Q 007668 150 DISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSD-GVL-TKFSESSFFGNRGLCGKQIN 210 (594)
Q Consensus 150 ~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~l-~~l~~l~l~~N~~~c~~~~~ 210 (594)
+|++|+|+++.|..|..+++|++|+|++|+|++.++.. ..+ ++|+.|++++|||.|+|.+.
T Consensus 524 ~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~~~ 586 (635)
T 4g8a_A 524 NMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQ 586 (635)
T ss_dssp ECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGGGH
T ss_pred ECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCCcH
Confidence 99999999988899999999999999999999998875 555 68999999999999999863
No 287
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.72 E-value=5.1e-18 Score=186.80 Aligned_cols=140 Identities=18% Similarity=0.126 Sum_probs=126.5
Q ss_pred CCcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCC-CCCCCcCCCCccceeecccccccCCCChhhhCCCCCceE
Q 007668 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYG-EIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNL 149 (594)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 149 (594)
.++|+.|+|++|.+++..|..+.++++|++|+|++|++++ .+|..|..+++|++|+|++|++++..|..|..+++|++|
T Consensus 423 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 502 (606)
T 3vq2_A 423 LEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLL 502 (606)
T ss_dssp CTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred cccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEE
Confidence 4688899999999988888889999999999999999987 478889999999999999999998888999999999999
Q ss_pred eccCCcCCCCCCccccccCCCcEEEeecccccccCCCCcccc-cCCcccccCCCCCCCCccc
Q 007668 150 DISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLT-KFSESSFFGNRGLCGKQIN 210 (594)
Q Consensus 150 ~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~-~l~~l~l~~N~~~c~~~~~ 210 (594)
+|++|++++..|..+..+++|+.|+|++|+|+.+++....++ +|+.|++++|++.|+|++.
T Consensus 503 ~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~p~~~~~l~~~L~~l~l~~N~~~c~c~~~ 564 (606)
T 3vq2_A 503 NMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVACICEHQ 564 (606)
T ss_dssp ECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCCEESCGGGSCTTCCEEECCSCCCCCSSTTH
T ss_pred ECCCCcCCCcCHHHccCCCcCCEEECCCCcCcccCHhHhhhcccCcEEEccCCCcccCCccH
Confidence 999999999889999999999999999999998777767776 5999999999999999864
No 288
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.72 E-value=1e-17 Score=176.81 Aligned_cols=138 Identities=25% Similarity=0.266 Sum_probs=113.5
Q ss_pred CCcEEEEEcccCCCCCCCCc-------------------------cccCcccCCeeecccCccCCCCCCCcCCCCcccee
Q 007668 71 NKRVITLSLTNHKLSGPISA-------------------------DLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGL 125 (594)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~-------------------------~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 125 (594)
.++|++|+|++|.|+...+. .|.++++|++|+|++|+|+ .+| .+..+++|++|
T Consensus 135 l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L 212 (440)
T 3zyj_A 135 LSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDEL 212 (440)
T ss_dssp CSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCC-CCTTCSSCCEE
T ss_pred cccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-ccc-ccCCCcccCEE
Confidence 45777888888777644332 3555667777777777776 555 47778888888
Q ss_pred ecccccccCCCChhhhCCCCCceEeccCCcCCCCCCccccccCCCcEEEeecccccccCCCC-cccccCCcccccCCCCC
Q 007668 126 SLQSNYLSGSIPSELGNLSNLLNLDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSD-GVLTKFSESSFFGNRGL 204 (594)
Q Consensus 126 ~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~l~~l~~l~l~~N~~~ 204 (594)
+|++|.|++..|..|.++++|+.|+|++|+|+++.+..|..+++|+.|+|++|+|++.++.. ..+++|+.|++++|||.
T Consensus 213 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 213 DLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEE
T ss_pred ECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCcc
Confidence 88888888777888999999999999999999888889999999999999999999888765 78999999999999999
Q ss_pred CCCccc
Q 007668 205 CGKQIN 210 (594)
Q Consensus 205 c~~~~~ 210 (594)
|+|.+.
T Consensus 293 CdC~l~ 298 (440)
T 3zyj_A 293 CNCDIL 298 (440)
T ss_dssp CSSTTH
T ss_pred CCCCch
Confidence 999753
No 289
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.71 E-value=1.9e-17 Score=163.41 Aligned_cols=132 Identities=20% Similarity=0.174 Sum_probs=116.7
Q ss_pred CcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhhCCCCCceEec
Q 007668 72 KRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLDI 151 (594)
Q Consensus 72 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 151 (594)
++|++|+|++|+|++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|.+++..+..|.++++|++|++
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 57999999999999777778999999999999999999777778999999999999999999777788999999999999
Q ss_pred cCCcCCCCCCccccccCCCcEEEeecccccccC-C-CCcccccCCcccccCCCC
Q 007668 152 SSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAI-P-SDGVLTKFSESSFFGNRG 203 (594)
Q Consensus 152 ~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~-~-~~~~l~~l~~l~l~~N~~ 203 (594)
++|++++..+..+..+++|++|+|++|++++.. | ....+++|+.|++++|+.
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l 161 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI 161 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCC
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCC
Confidence 999999877778999999999999999998742 4 447889999999999964
No 290
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.71 E-value=4.6e-18 Score=161.67 Aligned_cols=116 Identities=18% Similarity=0.174 Sum_probs=108.9
Q ss_pred CCCcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhhCCCCCceE
Q 007668 70 KNKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNL 149 (594)
Q Consensus 70 ~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 149 (594)
..++|+.|+|++|+|++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|++|
T Consensus 55 ~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 134 (220)
T 2v70_A 55 KLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLL 134 (220)
T ss_dssp GCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEE
T ss_pred cCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEE
Confidence 35789999999999998888899999999999999999998888889999999999999999998889999999999999
Q ss_pred eccCCcCCCCCCccccccCCCcEEEeecccccccCC
Q 007668 150 DISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIP 185 (594)
Q Consensus 150 ~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~ 185 (594)
+|++|+|+++.|..|..+++|+.|+|++|++++..+
T Consensus 135 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 135 SLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp ECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred ECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 999999999889999999999999999999987654
No 291
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.70 E-value=3.1e-17 Score=162.65 Aligned_cols=133 Identities=21% Similarity=0.203 Sum_probs=109.3
Q ss_pred CCcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeeccccc-ccCCCChhhhCCCCCceE
Q 007668 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNY-LSGSIPSELGNLSNLLNL 149 (594)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L 149 (594)
.++|++|+|++|+|++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|. ++...|..|..+++|++|
T Consensus 31 ~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L 110 (285)
T 1ozn_A 31 PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 110 (285)
T ss_dssp CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEE
T ss_pred CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEE
Confidence 4578888888888887666778888888888888888887778888888888888888886 775557788888888888
Q ss_pred eccCCcCCCCCCccccccCCCcEEEeecccccccCCCC-cccccCCcccccCCCC
Q 007668 150 DISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSD-GVLTKFSESSFFGNRG 203 (594)
Q Consensus 150 ~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~l~~l~~l~l~~N~~ 203 (594)
+|++|++++..|..+..+++|++|+|++|++++.++.. ..+++|+.|++++|..
T Consensus 111 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 165 (285)
T 1ozn_A 111 HLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRI 165 (285)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred ECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcc
Confidence 88888888877788888888888888888888777653 6788888888888864
No 292
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.70 E-value=2.1e-17 Score=175.09 Aligned_cols=138 Identities=23% Similarity=0.234 Sum_probs=116.3
Q ss_pred CCcEEEEEcccCCCCCCCCc-------------------------cccCcccCCeeecccCccCCCCCCCcCCCCcccee
Q 007668 71 NKRVITLSLTNHKLSGPISA-------------------------DLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGL 125 (594)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~-------------------------~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 125 (594)
.++|++|+|++|.|+...+. .|.++++|++|+|++|+|+ .+| .+..+++|++|
T Consensus 146 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L 223 (452)
T 3zyi_A 146 LSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIK-DMP-NLTPLVGLEEL 223 (452)
T ss_dssp CTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCS-SCC-CCTTCTTCCEE
T ss_pred cCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccc-ccc-cccccccccEE
Confidence 46788888888888744433 3556667777777777777 344 47788888899
Q ss_pred ecccccccCCCChhhhCCCCCceEeccCCcCCCCCCccccccCCCcEEEeecccccccCCCC-cccccCCcccccCCCCC
Q 007668 126 SLQSNYLSGSIPSELGNLSNLLNLDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSD-GVLTKFSESSFFGNRGL 204 (594)
Q Consensus 126 ~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~l~~l~~l~l~~N~~~ 204 (594)
+|++|.|++..|..|.++++|+.|+|++|+|+++.|..|..+++|+.|+|++|+|++.++.. ..+++|+.|++++|+|.
T Consensus 224 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 224 EMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWN 303 (452)
T ss_dssp ECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEE
T ss_pred ECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcC
Confidence 99999999888889999999999999999999988999999999999999999999888765 77999999999999999
Q ss_pred CCCccc
Q 007668 205 CGKQIN 210 (594)
Q Consensus 205 c~~~~~ 210 (594)
|+|.+.
T Consensus 304 CdC~~~ 309 (452)
T 3zyi_A 304 CDCDIL 309 (452)
T ss_dssp CSTTTH
T ss_pred CCCCch
Confidence 999853
No 293
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.70 E-value=6.8e-17 Score=158.97 Aligned_cols=132 Identities=25% Similarity=0.280 Sum_probs=120.7
Q ss_pred CCcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhhCCCCCceEe
Q 007668 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLD 150 (594)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 150 (594)
.++|+.|+|++|.+++ + ..+.++++|++|+|++|.+++..+..|.++++|++|+|++|++++..+..|..+++|++|+
T Consensus 62 l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 139 (272)
T 3rfs_A 62 LPNVRYLALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLN 139 (272)
T ss_dssp CTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEE
Confidence 5789999999999996 3 4789999999999999999987777899999999999999999977777899999999999
Q ss_pred ccCCcCCCCCCccccccCCCcEEEeecccccccCCCC-cccccCCcccccCCCCC
Q 007668 151 ISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSD-GVLTKFSESSFFGNRGL 204 (594)
Q Consensus 151 l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~l~~l~~l~l~~N~~~ 204 (594)
|++|+|++..+..+..+++|+.|+|++|++++.++.. ..+++|+.|++++|+..
T Consensus 140 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 194 (272)
T 3rfs_A 140 LAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLK 194 (272)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS
T ss_pred CCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCC
Confidence 9999999977788899999999999999999888875 78999999999999754
No 294
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.69 E-value=2.4e-17 Score=166.74 Aligned_cols=132 Identities=21% Similarity=0.322 Sum_probs=117.7
Q ss_pred CCcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhhC--------
Q 007668 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGN-------- 142 (594)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-------- 142 (594)
.++|++|+|++|.|+ .+|..++++++|++|+|++|+|+ .+|..|.++++|++|+|++|++.+.+|..+..
T Consensus 103 l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~ 180 (328)
T 4fcg_A 103 LSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQ 180 (328)
T ss_dssp GTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEE
T ss_pred CCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhc
Confidence 468999999999999 88999999999999999999999 88989999999999999999888889887764
Q ss_pred -CCCCceEeccCCcCCCCCCccccccCCCcEEEeecccccccCCCCcccccCCcccccCCCCCC
Q 007668 143 -LSNLLNLDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNRGLC 205 (594)
Q Consensus 143 -l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~~c 205 (594)
+++|++|+|++|+|+ .+|..+..+++|+.|+|++|++++.++....+++|+.|++++|+...
T Consensus 181 ~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~l~~~l~~l~~L~~L~Ls~n~~~~ 243 (328)
T 4fcg_A 181 GLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSALGPAIHHLPKLEELDLRGCTALR 243 (328)
T ss_dssp ESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCCCCGGGGGCTTCCEEECTTCTTCC
T ss_pred cCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCcCchhhccCCCCCEEECcCCcchh
Confidence 899999999999999 58888999999999999999999887777888999999999987654
No 295
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.69 E-value=2.5e-17 Score=168.63 Aligned_cols=145 Identities=24% Similarity=0.272 Sum_probs=124.7
Q ss_pred CCCCccceeEeCC------------CCcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCcccee
Q 007668 58 PDPCNWKGVKCDK------------NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGL 125 (594)
Q Consensus 58 ~~~c~w~gv~c~~------------~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 125 (594)
..+|.|.|+ |+. .++|++|+|++|+|++..+..|.++++|++|+|++|++++..|..|.++++|++|
T Consensus 27 ~~~C~~~~~-c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 105 (353)
T 2z80_A 27 SLSCDRNGI-CKGSSGSLNSIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHL 105 (353)
T ss_dssp CCEECTTSE-EECCSTTCSSCCTTCCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCCCCeE-eeCCCCCcccccccccccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEE
Confidence 456788776 531 3589999999999997666799999999999999999998888889999999999
Q ss_pred ecccccccCCCChhhhCCCCCceEeccCCcCCCCCC-ccccccCCCcEEEeecc-cccccCCCC-cccccCCcccccCCC
Q 007668 126 SLQSNYLSGSIPSELGNLSNLLNLDISSNSLSDYIP-PSLGKLQRLITFNVSNN-FLVGAIPSD-GVLTKFSESSFFGNR 202 (594)
Q Consensus 126 ~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~l~~L~~l~l~~N-~l~~~~~~~-~~l~~l~~l~l~~N~ 202 (594)
+|++|+|++..+..|.++++|++|+|++|+++++.+ ..+..+++|+.|++++| .++..++.. ..+++|+.|++++|.
T Consensus 106 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~ 185 (353)
T 2z80_A 106 DLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASD 185 (353)
T ss_dssp ECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETT
T ss_pred ECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCC
Confidence 999999995555559999999999999999997444 48999999999999999 577776644 789999999999997
Q ss_pred C
Q 007668 203 G 203 (594)
Q Consensus 203 ~ 203 (594)
.
T Consensus 186 l 186 (353)
T 2z80_A 186 L 186 (353)
T ss_dssp C
T ss_pred c
Confidence 4
No 296
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.69 E-value=7.3e-17 Score=160.19 Aligned_cols=130 Identities=23% Similarity=0.220 Sum_probs=76.2
Q ss_pred CCcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhhCCCCCceEe
Q 007668 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLD 150 (594)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 150 (594)
.++|+.|+|++|.|++. +.. +.+++|++|+|++|+|+ .+|..+..+++|++|+|++|+|++..|..|..+++|++|+
T Consensus 54 l~~L~~L~L~~n~l~~~-~~~-~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~ 130 (290)
T 1p9a_G 54 YTRLTQLNLDRAELTKL-QVD-GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELY 130 (290)
T ss_dssp CTTCCEEECTTSCCCEE-ECC-SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCcc-cCC-CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEE
Confidence 34555555555555532 222 45556666666666665 5555566666666666666666644445566666666666
Q ss_pred ccCCcCCCCCCccccccCCCcEEEeecccccccCCCC-cccccCCcccccCCCC
Q 007668 151 ISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSD-GVLTKFSESSFFGNRG 203 (594)
Q Consensus 151 l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~l~~l~~l~l~~N~~ 203 (594)
|++|+|+++.+..|..+++|+.|+|++|+|++.++.. ..+++|+.|++++|+.
T Consensus 131 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l 184 (290)
T 1p9a_G 131 LKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSL 184 (290)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCC
T ss_pred CCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcC
Confidence 6666666555555566666666666666666555544 4566666666666653
No 297
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.69 E-value=1e-16 Score=152.42 Aligned_cols=133 Identities=17% Similarity=0.218 Sum_probs=118.6
Q ss_pred eeEeCCCCcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhhCCC
Q 007668 65 GVKCDKNKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLS 144 (594)
Q Consensus 65 gv~c~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 144 (594)
+-.|.. +.+++++|+++ .+|..+. ++|+.|+|++|+|++..+..|..+++|++|+|++|+|++..|..|.+++
T Consensus 8 ~C~C~~----~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~ 80 (220)
T 2v9t_B 8 ACTCSN----NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLR 80 (220)
T ss_dssp TSEEET----TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCS
T ss_pred CCEECC----CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCc
Confidence 456642 46899999999 6777664 7999999999999977777999999999999999999988899999999
Q ss_pred CCceEeccCCcCCCCCCccccccCCCcEEEeecccccccCCCC-cccccCCcccccCCCCC
Q 007668 145 NLLNLDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSD-GVLTKFSESSFFGNRGL 204 (594)
Q Consensus 145 ~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~l~~l~~l~l~~N~~~ 204 (594)
+|++|+|++|+|+++.+..|..+++|+.|+|++|+|++.++.. ..+++|+.|++++|+..
T Consensus 81 ~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 141 (220)
T 2v9t_B 81 SLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQ 141 (220)
T ss_dssp SCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS
T ss_pred CCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCC
Confidence 9999999999999877777899999999999999999997765 78999999999999753
No 298
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.69 E-value=2.6e-17 Score=174.55 Aligned_cols=146 Identities=17% Similarity=0.183 Sum_probs=128.6
Q ss_pred CCCccce--eEeCC---------CCcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCC-CCCcCCCCccceee
Q 007668 59 DPCNWKG--VKCDK---------NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEI-PSELGNCTELQGLS 126 (594)
Q Consensus 59 ~~c~w~g--v~c~~---------~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~ 126 (594)
+.|.|.+ |.|+. .++|++|+|++|.|++..|..|.++++|++|+|++|.+.+.+ |..|.++++|++|+
T Consensus 6 ~~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~ 85 (455)
T 3v47_A 6 SECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILK 85 (455)
T ss_dssp -CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEE
T ss_pred ceeEEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEe
Confidence 4566665 77753 267999999999999888999999999999999999998655 56799999999999
Q ss_pred cccccccCCCChhhhCCCCCceEeccCCcCCCCCCcc--ccccCCCcEEEeecccccccCCC--CcccccCCcccccCCC
Q 007668 127 LQSNYLSGSIPSELGNLSNLLNLDISSNSLSDYIPPS--LGKLQRLITFNVSNNFLVGAIPS--DGVLTKFSESSFFGNR 202 (594)
Q Consensus 127 Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~l~~L~~l~l~~N~l~~~~~~--~~~l~~l~~l~l~~N~ 202 (594)
|++|.+++..|..|.++++|++|+|++|++++..|.. +..+++|++|+|++|++++..|. ...+++|+.|++++|+
T Consensus 86 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~ 165 (455)
T 3v47_A 86 LDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNK 165 (455)
T ss_dssp CTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCC
T ss_pred CCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCc
Confidence 9999999888999999999999999999999855544 99999999999999999998776 4789999999999998
Q ss_pred CC
Q 007668 203 GL 204 (594)
Q Consensus 203 ~~ 204 (594)
..
T Consensus 166 l~ 167 (455)
T 3v47_A 166 VK 167 (455)
T ss_dssp BS
T ss_pred cc
Confidence 54
No 299
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.68 E-value=1.2e-16 Score=152.94 Aligned_cols=136 Identities=20% Similarity=0.195 Sum_probs=120.2
Q ss_pred ccceeEeCCCCcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhh
Q 007668 62 NWKGVKCDKNKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELG 141 (594)
Q Consensus 62 ~w~gv~c~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 141 (594)
.|..-.|+ .+.++.++++++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|+...+..|.
T Consensus 13 ~~~~~~Cs----~~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~ 85 (229)
T 3e6j_A 13 CPSQCSCS----GTTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFD 85 (229)
T ss_dssp CCTTCEEE----TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTT
T ss_pred CCCCCEEe----CCEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcc
Confidence 34556775 346999999999 6776664 8999999999999988899999999999999999999966667789
Q ss_pred CCCCCceEeccCCcCCCCCCccccccCCCcEEEeecccccccCCCCcccccCCcccccCCCCC
Q 007668 142 NLSNLLNLDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNRGL 204 (594)
Q Consensus 142 ~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~~ 204 (594)
.+++|+.|+|++|+|+++.+..|..+++|+.|+|++|+|+.++.....+++|+.|++++|+..
T Consensus 86 ~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~L~~N~l~ 148 (229)
T 3e6j_A 86 SLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLTELPRGIERLTHLTHLALDQNQLK 148 (229)
T ss_dssp TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCSCCTTGGGCTTCSEEECCSSCCC
T ss_pred cCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCcccccCcccccCCCCCEEECCCCcCC
Confidence 999999999999999997778889999999999999999977777789999999999999754
No 300
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.68 E-value=2.8e-17 Score=165.57 Aligned_cols=144 Identities=24% Similarity=0.277 Sum_probs=117.8
Q ss_pred ccceeEeCCCCcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCc-CCCCccceeecccccccCCCChhh
Q 007668 62 NWKGVKCDKNKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSEL-GNCTELQGLSLQSNYLSGSIPSEL 140 (594)
Q Consensus 62 ~w~gv~c~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~~~ 140 (594)
...++.+...++|+.|+|++|++++..+..+..+++|++|+|++|.+++..|..+ ..+++|++|+|++|.|++. |. .
T Consensus 110 ~l~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~ 187 (317)
T 3o53_A 110 NISRVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-Q 187 (317)
T ss_dssp CCSEEEECCCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-C
T ss_pred ccCCcCccccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-cc-c
Confidence 3455555556778889999999987777788889999999999999987767666 4788999999999999844 43 3
Q ss_pred hCCCCCceEeccCCcCCCCCCccccccCCCcEEEeecccccccCCCCcccccCCcccccCCCCCCCCc
Q 007668 141 GNLSNLLNLDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNRGLCGKQ 208 (594)
Q Consensus 141 ~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~~c~~~ 208 (594)
..+++|++|+|++|+|++ +|..+..+++|+.|+|++|+|++.++....+++|+.|++++|++.|++.
T Consensus 188 ~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~~l~~~~~~l~~L~~L~l~~N~~~~~~~ 254 (317)
T 3o53_A 188 VVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVLIEKALRFSQNLEHFDLRGNGFHCGTL 254 (317)
T ss_dssp CCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCEECTTCCCCTTCCEEECTTCCCBHHHH
T ss_pred cccccCCEEECCCCcCCc-chhhhcccCcccEEECcCCcccchhhHhhcCCCCCEEEccCCCccCcCH
Confidence 358899999999999997 5666889999999999999999877777888999999999999888644
No 301
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.68 E-value=5.5e-17 Score=151.47 Aligned_cols=128 Identities=18% Similarity=0.228 Sum_probs=101.3
Q ss_pred CCcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhhCCCCCceEe
Q 007668 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLD 150 (594)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 150 (594)
.++|++|+|++|.++ .+ ..+..+++|++|+|++|++++..|..|..+++|++|+|++|.+++..|..+..+++|++|+
T Consensus 65 l~~L~~L~l~~n~~~-~~-~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~ 142 (197)
T 4ezg_A 65 AHNIKDLTINNIHAT-NY-NPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSID 142 (197)
T ss_dssp CTTCSEEEEESCCCS-CC-GGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEE
T ss_pred CCCCCEEEccCCCCC-cc-hhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEE
Confidence 467888888888776 23 4678888888888888888876777888888888888888888877788888888888888
Q ss_pred ccCCc-CCCCCCccccccCCCcEEEeecccccccCCCCcccccCCcccccCCCC
Q 007668 151 ISSNS-LSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNRG 203 (594)
Q Consensus 151 l~~N~-l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~ 203 (594)
|++|. ++. +| .+..+++|+.|++++|++++.. ....+++|+.|++++|+.
T Consensus 143 L~~n~~i~~-~~-~l~~l~~L~~L~l~~n~i~~~~-~l~~l~~L~~L~l~~N~i 193 (197)
T 4ezg_A 143 LSYNGAITD-IM-PLKTLPELKSLNIQFDGVHDYR-GIEDFPKLNQLYAFSQTI 193 (197)
T ss_dssp CCSCTBCCC-CG-GGGGCSSCCEEECTTBCCCCCT-TGGGCSSCCEEEECBC--
T ss_pred ccCCCCccc-cH-hhcCCCCCCEEECCCCCCcChH-HhccCCCCCEEEeeCccc
Confidence 88887 665 44 6888888888888888888754 557788888888888873
No 302
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.68 E-value=6.3e-17 Score=178.09 Aligned_cols=134 Identities=20% Similarity=0.214 Sum_probs=120.9
Q ss_pred CCcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhhCCCCCceEe
Q 007668 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLD 150 (594)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 150 (594)
.++|++|+|++|++++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|.+++..|..|.++++|++|+
T Consensus 31 ~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 110 (606)
T 3vq2_A 31 PSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLV 110 (606)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEE
T ss_pred CCCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEE
Confidence 46899999999999988888999999999999999999988888999999999999999999988899999999999999
Q ss_pred ccCCcCCCCCCccccccCCCcEEEeecccccc-cCC-CCcccccCCcccccCCCCC
Q 007668 151 ISSNSLSDYIPPSLGKLQRLITFNVSNNFLVG-AIP-SDGVLTKFSESSFFGNRGL 204 (594)
Q Consensus 151 l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~-~~~-~~~~l~~l~~l~l~~N~~~ 204 (594)
|++|++++..+..+.++++|++|+|++|.+++ .+| ....+++|+.|++++|...
T Consensus 111 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~ 166 (606)
T 3vq2_A 111 AVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQ 166 (606)
T ss_dssp CTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCC
T ss_pred ccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcce
Confidence 99999998777889999999999999999986 334 4588999999999999754
No 303
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.68 E-value=5.2e-17 Score=156.55 Aligned_cols=132 Identities=16% Similarity=0.153 Sum_probs=117.5
Q ss_pred CCcEEEEEcccCCCCCCCCccccCcccCCeeecccCc-cCCCCCCCcCCCCccceeeccc-ccccCCCChhhhCCCCCce
Q 007668 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNN-FYGEIPSELGNCTELQGLSLQS-NYLSGSIPSELGNLSNLLN 148 (594)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~ 148 (594)
..+++.|+|++|+|++..+..|.++++|++|+|++|+ +++..+..|.++++|++|+|++ |+|++..+..|.++++|++
T Consensus 30 ~~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~ 109 (239)
T 2xwt_C 30 PPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKF 109 (239)
T ss_dssp CTTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCE
T ss_pred CCcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCE
Confidence 3589999999999997777799999999999999997 8866666899999999999999 9999766678999999999
Q ss_pred EeccCCcCCCCCCccccccCCCc---EEEeecc-cccccCCCC-cccccCC-cccccCCCCC
Q 007668 149 LDISSNSLSDYIPPSLGKLQRLI---TFNVSNN-FLVGAIPSD-GVLTKFS-ESSFFGNRGL 204 (594)
Q Consensus 149 L~l~~N~l~~~~~~~~~~l~~L~---~l~l~~N-~l~~~~~~~-~~l~~l~-~l~l~~N~~~ 204 (594)
|+|++|++++ +|. +..+++|+ .|++++| ++++.++.. ..+++|+ .|++++|...
T Consensus 110 L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~ 169 (239)
T 2xwt_C 110 LGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT 169 (239)
T ss_dssp EEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC
T ss_pred EeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc
Confidence 9999999998 666 88888888 9999999 999888764 7899999 9999999753
No 304
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.68 E-value=9.9e-17 Score=169.90 Aligned_cols=134 Identities=15% Similarity=0.105 Sum_probs=118.8
Q ss_pred CCcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhhCCCCCceEe
Q 007668 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLD 150 (594)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 150 (594)
.++++.|+|++|+|++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+
T Consensus 74 ~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 153 (452)
T 3zyi_A 74 PSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELW 153 (452)
T ss_dssp CTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEE
T ss_pred CCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEE
Confidence 35899999999999988899999999999999999999988889999999999999999999977677799999999999
Q ss_pred ccCCcCCCCCCccccccCCCcEEEeec-ccccccCCC-CcccccCCcccccCCCCC
Q 007668 151 ISSNSLSDYIPPSLGKLQRLITFNVSN-NFLVGAIPS-DGVLTKFSESSFFGNRGL 204 (594)
Q Consensus 151 l~~N~l~~~~~~~~~~l~~L~~l~l~~-N~l~~~~~~-~~~l~~l~~l~l~~N~~~ 204 (594)
|++|+|+++.+..|.++++|+.|+|++ |.+...++. ...+++|+.|++++|...
T Consensus 154 L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~ 209 (452)
T 3zyi_A 154 LRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIK 209 (452)
T ss_dssp CCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCS
T ss_pred CCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccc
Confidence 999999987777899999999999998 555555554 377899999999998754
No 305
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.68 E-value=8e-17 Score=171.90 Aligned_cols=134 Identities=22% Similarity=0.200 Sum_probs=117.2
Q ss_pred CCcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhhCCCCCceEe
Q 007668 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLD 150 (594)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 150 (594)
..+++.|+|++|+|++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|+|++..+..|.++++|++|+
T Consensus 31 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 110 (477)
T 2id5_A 31 PTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLD 110 (477)
T ss_dssp CTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEE
T ss_pred CCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEE
Confidence 35788999999999987788999999999999999999988888999999999999999999965556688999999999
Q ss_pred ccCCcCCCCCCccccccCCCcEEEeecccccccCCCC-cccccCCcccccCCCCC
Q 007668 151 ISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSD-GVLTKFSESSFFGNRGL 204 (594)
Q Consensus 151 l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~l~~l~~l~l~~N~~~ 204 (594)
|++|++++..|..|..+++|+.|+|++|++++..+.. ..+++|+.|++++|...
T Consensus 111 Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 165 (477)
T 2id5_A 111 ISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLT 165 (477)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCS
T ss_pred CCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCc
Confidence 9999999888888999999999999999998887754 77889999999998653
No 306
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.67 E-value=4.5e-17 Score=177.02 Aligned_cols=144 Identities=24% Similarity=0.229 Sum_probs=126.6
Q ss_pred CCccceeEeCC------------CCcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeec
Q 007668 60 PCNWKGVKCDK------------NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSL 127 (594)
Q Consensus 60 ~c~w~gv~c~~------------~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 127 (594)
.|.|.|+ |+. .++|++|+|++|+|++..|..|.++++|++|+|++|++++..|..|.++++|++|+|
T Consensus 3 ~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 81 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDL 81 (549)
T ss_dssp EECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred cCCCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEEC
Confidence 4888887 752 258999999999999888899999999999999999999888889999999999999
Q ss_pred ccccccCCCChhhhCCCCCceEeccCCcCCCC-CCccccccCCCcEEEeeccc-ccccCC-CCcccccCCcccccCCCCC
Q 007668 128 QSNYLSGSIPSELGNLSNLLNLDISSNSLSDY-IPPSLGKLQRLITFNVSNNF-LVGAIP-SDGVLTKFSESSFFGNRGL 204 (594)
Q Consensus 128 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~-~~~~~~~l~~L~~l~l~~N~-l~~~~~-~~~~l~~l~~l~l~~N~~~ 204 (594)
++|++++..|..|.++++|++|+|++|++++. .|..+.++++|++|++++|+ +...++ ....+++|+.|++++|...
T Consensus 82 s~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~ 161 (549)
T 2z81_A 82 SDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLR 161 (549)
T ss_dssp TTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCC
T ss_pred CCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCccc
Confidence 99999987777799999999999999999963 57789999999999999999 444443 3478999999999999753
No 307
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.67 E-value=1e-16 Score=169.23 Aligned_cols=134 Identities=15% Similarity=0.090 Sum_probs=111.7
Q ss_pred CCcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhhCCCCCceEe
Q 007668 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLD 150 (594)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 150 (594)
.++++.|+|++|+|++..+..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+|+...+..|..+++|++|+
T Consensus 63 ~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 142 (440)
T 3zyj_A 63 STNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELW 142 (440)
T ss_dssp CTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEE
T ss_pred CCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceee
Confidence 35788999999999977778999999999999999999977778899999999999999999966666789999999999
Q ss_pred ccCCcCCCCCCccccccCCCcEEEeecc-cccccCCC-CcccccCCcccccCCCCC
Q 007668 151 ISSNSLSDYIPPSLGKLQRLITFNVSNN-FLVGAIPS-DGVLTKFSESSFFGNRGL 204 (594)
Q Consensus 151 l~~N~l~~~~~~~~~~l~~L~~l~l~~N-~l~~~~~~-~~~l~~l~~l~l~~N~~~ 204 (594)
|++|+|+++.+..|..+++|+.|+|++| .+....+. ...+++|+.|++++|...
T Consensus 143 L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~ 198 (440)
T 3zyj_A 143 LRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR 198 (440)
T ss_dssp CCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS
T ss_pred CCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc
Confidence 9999999877778888888888888884 45544443 367888888888888643
No 308
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.67 E-value=1.4e-16 Score=181.83 Aligned_cols=136 Identities=22% Similarity=0.238 Sum_probs=117.9
Q ss_pred CCcEEEEEcccCCCCCCCCc-cccCcccCCeeecccCccC-----CCCCCCcCCCCccceeecccccccCCCChhhhCCC
Q 007668 71 NKRVITLSLTNHKLSGPISA-DLGKLDQLKFLNLHSNNFY-----GEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLS 144 (594)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~-~~~~l~~L~~L~L~~N~l~-----~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 144 (594)
.++|+.|+|++|++++..+. .+..+++|+.|+|++|.++ +..|..|.++++|+.|+|++|+|++..|..|..++
T Consensus 425 l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 504 (844)
T 3j0a_A 425 VPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLT 504 (844)
T ss_dssp CTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCC
T ss_pred CCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchh
Confidence 46888899999998865443 4667889999999999987 34456789999999999999999988888899999
Q ss_pred CCceEeccCCcCCCCCCccccccCCCcEEEeecccccccCCCCcccccCCcccccCCCCCCCCccc
Q 007668 145 NLLNLDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNRGLCGKQIN 210 (594)
Q Consensus 145 ~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~~c~~~~~ 210 (594)
+|+.|+|++|+|+++.|..+. ++|+.|+|++|+|++.+|.. +.+|+.+++++|||.|+|++.
T Consensus 505 ~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~--~~~L~~l~l~~Np~~C~c~~~ 566 (844)
T 3j0a_A 505 ALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDV--FVSLSVLDITHNKFICECELS 566 (844)
T ss_dssp SCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCC--CSSCCEEEEEEECCCCSSSCC
T ss_pred hhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhH--hCCcCEEEecCCCcccccccH
Confidence 999999999999987776665 89999999999999998864 678999999999999998863
No 309
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.67 E-value=7.7e-17 Score=175.93 Aligned_cols=139 Identities=19% Similarity=0.218 Sum_probs=122.4
Q ss_pred CCcEEEEEcccCCCCCCCC-ccccCcccCCeeecccCccCCCCCCCcCCCCccceeeccccccc-CCCChhhhCCCCCce
Q 007668 71 NKRVITLSLTNHKLSGPIS-ADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLS-GSIPSELGNLSNLLN 148 (594)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~ 148 (594)
.++|+.|+|++|.+++..+ ..+.++++|++|+|++|.+++..|..|.++++|++|+|++|.++ +.+|..+..+++|++
T Consensus 395 l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~ 474 (570)
T 2z63_A 395 LEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTF 474 (570)
T ss_dssp CTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCE
T ss_pred cCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCE
Confidence 4567777788887776555 46888899999999999998888888999999999999999997 578889999999999
Q ss_pred EeccCCcCCCCCCccccccCCCcEEEeecccccccCCCC-cccccCCcccccCCCCCCCCcc
Q 007668 149 LDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSD-GVLTKFSESSFFGNRGLCGKQI 209 (594)
Q Consensus 149 L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~l~~l~~l~l~~N~~~c~~~~ 209 (594)
|+|++|++++..|..+..+++|+.|+|++|++++.++.. ..+++|+.|++++|++.|+||.
T Consensus 475 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 536 (570)
T 2z63_A 475 LDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 536 (570)
T ss_dssp EECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred EECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcc
Confidence 999999999988999999999999999999999988764 7899999999999999999875
No 310
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.67 E-value=5.1e-17 Score=178.83 Aligned_cols=139 Identities=22% Similarity=0.191 Sum_probs=115.9
Q ss_pred CCcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCC---CCCCcCCCCccceeecccccccCCCChhhhCCCCCc
Q 007668 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGE---IPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLL 147 (594)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~---~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 147 (594)
.++|+.|+|++|.+++..|..+.++++|++|+|++|++++. .+..+..+++|++|+|++|++++..|..|..+++|+
T Consensus 424 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 503 (606)
T 3t6q_A 424 LHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMN 503 (606)
T ss_dssp CTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred cccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCC
Confidence 46778888888888877777788888888888888888752 235678888888888888888877788888889999
Q ss_pred eEeccCCcCCCCCCccccccCCCcEEEeecccccccCCCC-cccccCCcccccCCCCCCCCccc
Q 007668 148 NLDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSD-GVLTKFSESSFFGNRGLCGKQIN 210 (594)
Q Consensus 148 ~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~l~~l~~l~l~~N~~~c~~~~~ 210 (594)
+|+|++|++++..|..+..+++| .|+|++|++++.++.. ..+++|+.+++++|++.|+|+..
T Consensus 504 ~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~~ 566 (606)
T 3t6q_A 504 HVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCSNI 566 (606)
T ss_dssp EEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGGGH
T ss_pred EEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCCcH
Confidence 99999999988888888899999 9999999999887765 77899999999999999998853
No 311
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.66 E-value=1e-16 Score=174.64 Aligned_cols=139 Identities=21% Similarity=0.194 Sum_probs=94.9
Q ss_pred CCcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCC--CCCCcCCCCccceeecccccccCCCChh-hhC-----
Q 007668 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGE--IPSELGNCTELQGLSLQSNYLSGSIPSE-LGN----- 142 (594)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~--~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~----- 142 (594)
.++|+.|+|++|.+++.+|..+.++++|++|+|++|++++. +|..|.++++|++|+|++|++++.+|.. +..
T Consensus 352 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~ 431 (562)
T 3a79_B 352 PSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESIL 431 (562)
T ss_dssp CCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCC
T ss_pred CCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCC
Confidence 45566666666666655555555566666666666655531 1234555555555555555555423321 222
Q ss_pred ----------------C-CCCceEeccCCcCCCCCCccccccCCCcEEEeecccccccCCC-CcccccCCcccccCCCCC
Q 007668 143 ----------------L-SNLLNLDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPS-DGVLTKFSESSFFGNRGL 204 (594)
Q Consensus 143 ----------------l-~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l~~l~~l~l~~N~~~ 204 (594)
+ ++|+.|+|++|+|+. +|..+..+++|+.|+|++|+|+++++. ...+++|+.|++++|+|.
T Consensus 432 ~L~l~~n~l~~~~~~~l~~~L~~L~L~~N~l~~-ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~ 510 (562)
T 3a79_B 432 VLNLSSNMLTGSVFRCLPPKVKVLDLHNNRIMS-IPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWD 510 (562)
T ss_dssp EEECCSSCCCGGGGSSCCTTCSEEECCSSCCCC-CCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCCBC
T ss_pred EEECCCCCCCcchhhhhcCcCCEEECCCCcCcc-cChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCCcC
Confidence 2 578888888888885 777777999999999999999987776 588999999999999999
Q ss_pred CCCccc
Q 007668 205 CGKQIN 210 (594)
Q Consensus 205 c~~~~~ 210 (594)
|+|++.
T Consensus 511 c~c~~~ 516 (562)
T 3a79_B 511 CTCPGI 516 (562)
T ss_dssp CCHHHH
T ss_pred CCcchH
Confidence 998863
No 312
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.66 E-value=8.7e-17 Score=179.46 Aligned_cols=139 Identities=20% Similarity=0.218 Sum_probs=116.5
Q ss_pred CCcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCC--------CCcCCCCccceeecccccccCCCChhhhC
Q 007668 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIP--------SELGNCTELQGLSLQSNYLSGSIPSELGN 142 (594)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p--------~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 142 (594)
.++|+.|+|++|+|++..+..|.++++|++|+|++|++++..+ ..|.++++|++|+|++|+|+...+..|.+
T Consensus 479 l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~ 558 (680)
T 1ziw_A 479 LRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKD 558 (680)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTT
T ss_pred CCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHccc
Confidence 4678888899998887777788888999999999998875321 23788899999999999998444456899
Q ss_pred CCCCceEeccCCcCCCCCCccccccCCCcEEEeecccccccCCCC-c-ccccCCcccccCCCCCCCCcc
Q 007668 143 LSNLLNLDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSD-G-VLTKFSESSFFGNRGLCGKQI 209 (594)
Q Consensus 143 l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~-~l~~l~~l~l~~N~~~c~~~~ 209 (594)
+++|+.|+|++|+|+++.+..|..+++|+.|+|++|+|++.++.. . .+++|+.+++++|||.|+|++
T Consensus 559 l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 559 LFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCES 627 (680)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCCC
T ss_pred ccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCcc
Confidence 999999999999999877777889999999999999999887764 3 689999999999999999885
No 313
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.66 E-value=7.5e-17 Score=167.43 Aligned_cols=133 Identities=20% Similarity=0.146 Sum_probs=118.5
Q ss_pred CcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhhCCCCCceEec
Q 007668 72 KRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLDI 151 (594)
Q Consensus 72 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 151 (594)
.+++.|++++|.++...+..|.++++|++|+|++|.+++..+..|..+++|++|+|++|.+++..|..|.++++|++|+|
T Consensus 45 ~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 124 (390)
T 3o6n_A 45 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 124 (390)
T ss_dssp CCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEEC
Confidence 67899999999999554456789999999999999999777779999999999999999999888888999999999999
Q ss_pred cCCcCCCCCCccccccCCCcEEEeecccccccCCCC-cccccCCcccccCCCCC
Q 007668 152 SSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSD-GVLTKFSESSFFGNRGL 204 (594)
Q Consensus 152 ~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~l~~l~~l~l~~N~~~ 204 (594)
++|+|+.+.+..|..+++|++|+|++|++++.++.. ..+++|+.|++++|+..
T Consensus 125 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 178 (390)
T 3o6n_A 125 ERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLT 178 (390)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCS
T ss_pred CCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCC
Confidence 999999855566799999999999999999887764 78999999999999753
No 314
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.66 E-value=2.3e-16 Score=143.45 Aligned_cols=109 Identities=20% Similarity=0.230 Sum_probs=96.0
Q ss_pred EEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhhCCCCCceEeccCC
Q 007668 75 ITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLDISSN 154 (594)
Q Consensus 75 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N 154 (594)
+.|++++|+|+ .+|..+ .++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|++|
T Consensus 12 ~~l~~s~n~l~-~ip~~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLA-SVPTGI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcC-ccCccC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 46888999999 577666 389999999999999888889999999999999999999777777899999999999999
Q ss_pred cCCCCCCccccccCCCcEEEeecccccccCCC
Q 007668 155 SLSDYIPPSLGKLQRLITFNVSNNFLVGAIPS 186 (594)
Q Consensus 155 ~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~ 186 (594)
+|+++.+..|..+++|+.|+|++|+++...+.
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~~ 120 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCACSD 120 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTTBGG
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCCchh
Confidence 99987777899999999999999999877653
No 315
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.66 E-value=9.6e-17 Score=146.92 Aligned_cols=127 Identities=18% Similarity=0.144 Sum_probs=110.8
Q ss_pred CCcEEEEEcccCCCCCCCCccccCcc-cCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhhCCCCCceE
Q 007668 71 NKRVITLSLTNHKLSGPISADLGKLD-QLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNL 149 (594)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 149 (594)
..+|+.|+|++|+|+ .++. +..+. +|++|+|++|.|++. ..|..+++|++|+|++|+|++..+..|..+++|++|
T Consensus 18 ~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 93 (176)
T 1a9n_A 18 AVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTEL 93 (176)
T ss_dssp TTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEE
T ss_pred cCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEE
Confidence 468999999999999 4554 55555 999999999999954 589999999999999999996555666999999999
Q ss_pred eccCCcCCCCCCc--cccccCCCcEEEeecccccccCCC----CcccccCCcccccCCC
Q 007668 150 DISSNSLSDYIPP--SLGKLQRLITFNVSNNFLVGAIPS----DGVLTKFSESSFFGNR 202 (594)
Q Consensus 150 ~l~~N~l~~~~~~--~~~~l~~L~~l~l~~N~l~~~~~~----~~~l~~l~~l~l~~N~ 202 (594)
+|++|+|+. +|. .+..+++|+.|++++|+++..+.. ...+++|+.|++++|+
T Consensus 94 ~L~~N~i~~-~~~~~~l~~l~~L~~L~l~~N~i~~~~~~~~~~~~~l~~L~~Ld~~~n~ 151 (176)
T 1a9n_A 94 ILTNNSLVE-LGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVK 151 (176)
T ss_dssp ECCSCCCCC-GGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETTEECC
T ss_pred ECCCCcCCc-chhhHhhhcCCCCCEEEecCCCCCCcHhHHHHHHHHCCccceeCCCcCC
Confidence 999999986 665 899999999999999999977664 5789999999999986
No 316
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.66 E-value=7.1e-17 Score=180.26 Aligned_cols=174 Identities=20% Similarity=0.183 Sum_probs=114.2
Q ss_pred CCcchHHHHHHHHHhccCC-CCCCcCCCCCCCCCCccceeEeCCCCcE------------------EEEEcccCCCCC--
Q 007668 28 AINSDGEALLSFRTAVVSS-DGFLNQWRPEDPDPCNWKGVKCDKNKRV------------------ITLSLTNHKLSG-- 86 (594)
Q Consensus 28 ~~~~~~~~L~~~k~~~~~~-~~~l~~w~~~~~~~c~w~gv~c~~~~~l------------------~~L~L~~n~l~~-- 86 (594)
....+.++|+++....... ......|.......+.|.+++++. +++ ..++|++|.|.+
T Consensus 129 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-~~~~~l~L~~n~~~~~~~~~l~~l~Ls~~~i~~~~ 207 (727)
T 4b8c_D 129 LVDCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVST-PLTPKIELFANGKDEANQALLQHKKLSQYSIDEDD 207 (727)
T ss_dssp ---CCCHHHHHHHHHHHHHHTTC---------------------------------------------------------
T ss_pred ccccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceecC-CccceEEeeCCCCCcchhhHhhcCccCcccccCcc
Confidence 3467788999998776332 223345654455567788776653 223 334444444442
Q ss_pred -------CCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhhCCCCCceEeccCCcCCCC
Q 007668 87 -------PISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLDISSNSLSDY 159 (594)
Q Consensus 87 -------~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 159 (594)
..+..|..+++|+.|+|++|.|. .+|..+.++++|++|+|++|.|+ .+|..|.+|++|++|+|++|+|+ .
T Consensus 208 ~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~ 284 (727)
T 4b8c_D 208 DIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-S 284 (727)
T ss_dssp --------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-S
T ss_pred ccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-c
Confidence 34667888999999999999999 78888889999999999999999 89999999999999999999999 5
Q ss_pred CCccccccCCCcEEEeecccccccCCCCcccccCCcccccCCCCCC
Q 007668 160 IPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNRGLC 205 (594)
Q Consensus 160 ~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~~c 205 (594)
+|..|..|++|++|+|++|.|+.++.....+++|+.|+|++|++..
T Consensus 285 lp~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~L~~N~l~~ 330 (727)
T 4b8c_D 285 LPAELGSCFQLKYFYFFDNMVTTLPWEFGNLCNLQFLGVEGNPLEK 330 (727)
T ss_dssp CCSSGGGGTTCSEEECCSSCCCCCCSSTTSCTTCCCEECTTSCCCS
T ss_pred cChhhcCCCCCCEEECCCCCCCccChhhhcCCCccEEeCCCCccCC
Confidence 7999999999999999999999777777899999999999998753
No 317
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.66 E-value=8.3e-17 Score=176.59 Aligned_cols=133 Identities=20% Similarity=0.135 Sum_probs=115.8
Q ss_pred CcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhhCCCCCceEec
Q 007668 72 KRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLDI 151 (594)
Q Consensus 72 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 151 (594)
.+++.|++++|.++...+..|.++++|++|+|++|.|++..|..|..+++|++|+|++|.|++..|..|.++++|++|+|
T Consensus 51 ~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 130 (597)
T 3oja_B 51 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 130 (597)
T ss_dssp CCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEe
Confidence 56788999999998665666888999999999999999877788999999999999999999888888899999999999
Q ss_pred cCCcCCCCCCccccccCCCcEEEeecccccccCCC-CcccccCCcccccCCCCC
Q 007668 152 SSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPS-DGVLTKFSESSFFGNRGL 204 (594)
Q Consensus 152 ~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l~~l~~l~l~~N~~~ 204 (594)
++|.|+++.+..|.++++|++|+|++|.|++.++. ...+++|+.|++++|...
T Consensus 131 ~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 184 (597)
T 3oja_B 131 ERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLT 184 (597)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCS
T ss_pred eCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCC
Confidence 99999986666678999999999999999988875 478899999999999753
No 318
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.66 E-value=8.8e-17 Score=173.53 Aligned_cols=139 Identities=23% Similarity=0.238 Sum_probs=95.9
Q ss_pred CCcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCC--CCCCCcCCCCccceeecccccccCCCChh-hhCC----
Q 007668 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYG--EIPSELGNCTELQGLSLQSNYLSGSIPSE-LGNL---- 143 (594)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l---- 143 (594)
.++|++|+|++|++++.+|..+.++++|++|+|++|++++ .+|..+..+++|++|+|++|.+++.+|.. +..+
T Consensus 323 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~ 402 (520)
T 2z7x_B 323 ISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLL 402 (520)
T ss_dssp CCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCC
T ss_pred CCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCC
Confidence 4556666666666665566666666666666666666653 33344555555555555555555433322 2222
Q ss_pred ------------------CCCceEeccCCcCCCCCCccccccCCCcEEEeecccccccCCC-CcccccCCcccccCCCCC
Q 007668 144 ------------------SNLLNLDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPS-DGVLTKFSESSFFGNRGL 204 (594)
Q Consensus 144 ------------------~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l~~l~~l~l~~N~~~ 204 (594)
++|+.|+|++|+|+. +|..+..+++|+.|+|++|+|+.+++. ...+++|+.|++++|++.
T Consensus 403 ~L~Ls~N~l~~~~~~~l~~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~ 481 (520)
T 2z7x_B 403 SLNMSSNILTDTIFRCLPPRIKVLDLHSNKIKS-IPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWD 481 (520)
T ss_dssp EEECCSSCCCGGGGGSCCTTCCEEECCSSCCCC-CCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred EEECcCCCCCcchhhhhcccCCEEECCCCcccc-cchhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCCCc
Confidence 577778888888874 777777999999999999999987776 578999999999999999
Q ss_pred CCCccc
Q 007668 205 CGKQIN 210 (594)
Q Consensus 205 c~~~~~ 210 (594)
|+|++.
T Consensus 482 c~c~~~ 487 (520)
T 2z7x_B 482 CSCPRI 487 (520)
T ss_dssp CCHHHH
T ss_pred ccCCch
Confidence 998863
No 319
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.66 E-value=1.9e-16 Score=145.13 Aligned_cols=127 Identities=22% Similarity=0.263 Sum_probs=113.6
Q ss_pred CCccceeEeCC----------CCcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeeccc
Q 007668 60 PCNWKGVKCDK----------NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQS 129 (594)
Q Consensus 60 ~c~w~gv~c~~----------~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 129 (594)
.|.|.++.|+. .++|+.|+|++|++++..+..|.++++|++|+|++|+|++..+..|.++++|++|+|++
T Consensus 6 ~C~~~~l~~~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 6 SCSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp EEETTEEECCSSCCSSCCTTCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred EeCCCEEEecCCCCccCCCCCCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 46899999963 35899999999999987777889999999999999999977777789999999999999
Q ss_pred ccccCCCChhhhCCCCCceEeccCCcCCCCCCccccccCCCcEEEeecccccccCCC
Q 007668 130 NYLSGSIPSELGNLSNLLNLDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPS 186 (594)
Q Consensus 130 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~ 186 (594)
|+|++..+..|..+++|++|+|++|+|+++.+..+..+++|+.|+|++|++++..+.
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 142 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 142 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCcc
Confidence 999977777789999999999999999987666788999999999999999987653
No 320
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.65 E-value=1.7e-16 Score=149.39 Aligned_cols=129 Identities=21% Similarity=0.200 Sum_probs=114.4
Q ss_pred CCCcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhhCCCCCceE
Q 007668 70 KNKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNL 149 (594)
Q Consensus 70 ~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 149 (594)
..++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|..+++|++|
T Consensus 50 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 129 (208)
T 2o6s_A 50 ELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDL 129 (208)
T ss_dssp TCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred ccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEE
Confidence 35789999999999997777788999999999999999997777778999999999999999997777778999999999
Q ss_pred eccCCcCCCCCCccccccCCCcEEEeecccccccCCCCcccccCCcccccCCCCC
Q 007668 150 DISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNRGL 204 (594)
Q Consensus 150 ~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~~ 204 (594)
+|++|+|+++.+..+..+++|+.|+|++|++.+. +++|+.|++.+|...
T Consensus 130 ~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~------~~~l~~L~~~~n~~~ 178 (208)
T 2o6s_A 130 RLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT------CPGIRYLSEWINKHS 178 (208)
T ss_dssp ECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCC------TTTTHHHHHHHHHCT
T ss_pred ECCCCccceeCHHHhccCCCccEEEecCCCeecC------CCCHHHHHHHHHhCC
Confidence 9999999987777799999999999999998764 456778888888644
No 321
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.65 E-value=2.2e-16 Score=173.74 Aligned_cols=134 Identities=18% Similarity=0.126 Sum_probs=124.1
Q ss_pred CCcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhhCCCCCceEe
Q 007668 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLD 150 (594)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 150 (594)
+.+++.|+|++|.|++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|++|+
T Consensus 32 ~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 111 (606)
T 3t6q_A 32 PNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLF 111 (606)
T ss_dssp CTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEE
T ss_pred CCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEee
Confidence 36899999999999988899999999999999999999988899999999999999999999988899999999999999
Q ss_pred ccCCcCCCCCCccccccCCCcEEEeecccccccC-CCCcccccCCcccccCCCCC
Q 007668 151 ISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAI-PSDGVLTKFSESSFFGNRGL 204 (594)
Q Consensus 151 l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~-~~~~~l~~l~~l~l~~N~~~ 204 (594)
|++|+|++..|..+.++++|++|+|++|++++.. +....+++|+.|++++|+..
T Consensus 112 L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 166 (606)
T 3t6q_A 112 FIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIH 166 (606)
T ss_dssp CTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCC
T ss_pred ccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCccc
Confidence 9999999977889999999999999999999854 55556999999999999754
No 322
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.65 E-value=2.3e-16 Score=180.04 Aligned_cols=144 Identities=22% Similarity=0.209 Sum_probs=123.7
Q ss_pred CCccceeEeCCCCcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCC-CCCcCCCCccceeecccccccCCCCh
Q 007668 60 PCNWKGVKCDKNKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEI-PSELGNCTELQGLSLQSNYLSGSIPS 138 (594)
Q Consensus 60 ~c~w~gv~c~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~ 138 (594)
.|+|+.|++ .+++|++|+|++|.|++..+..|.++++|++|+|++|.+.+.+ |..|.++++|++|+|++|.|++..|.
T Consensus 13 ~~~L~~vP~-lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~ 91 (844)
T 3j0a_A 13 FCNLTQVPQ-VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPD 91 (844)
T ss_dssp CCCSSCCCS-SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTT
T ss_pred CCCCCCCCC-CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHh
Confidence 356888887 6789999999999999888889999999999999999666555 77899999999999999999988899
Q ss_pred hhhCCCCCceEeccCCcCCCCCCcc--ccccCCCcEEEeecccccccCCC--CcccccCCcccccCCCCC
Q 007668 139 ELGNLSNLLNLDISSNSLSDYIPPS--LGKLQRLITFNVSNNFLVGAIPS--DGVLTKFSESSFFGNRGL 204 (594)
Q Consensus 139 ~~~~l~~L~~L~l~~N~l~~~~~~~--~~~l~~L~~l~l~~N~l~~~~~~--~~~l~~l~~l~l~~N~~~ 204 (594)
.|.++++|++|+|++|.+++.+|.. |.++++|++|+|++|.+++..+. ...+++|+.|++++|...
T Consensus 92 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~ 161 (844)
T 3j0a_A 92 AFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIF 161 (844)
T ss_dssp SSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCC
T ss_pred HccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCC
Confidence 9999999999999999998866654 88999999999999999887653 478899999999998754
No 323
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.64 E-value=2.2e-16 Score=158.20 Aligned_cols=132 Identities=19% Similarity=0.231 Sum_probs=84.9
Q ss_pred CCcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCC-CCcCCCCccceeecccccccCCCChhhhCCCCCceE
Q 007668 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIP-SELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNL 149 (594)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 149 (594)
.++|++|+|++|.++ .+|..+.++++|++|+|++|++++..+ ..+..+++|++|+|++|.+++..|..|..+++|++|
T Consensus 77 ~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 155 (306)
T 2z66_A 77 TTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVL 155 (306)
T ss_dssp CSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEE
T ss_pred ccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEE
Confidence 356677777777766 455556666677777777776664433 456666666666666666666666666666666666
Q ss_pred eccCCcCCC-CCCccccccCCCcEEEeecccccccCCCC-cccccCCcccccCCCC
Q 007668 150 DISSNSLSD-YIPPSLGKLQRLITFNVSNNFLVGAIPSD-GVLTKFSESSFFGNRG 203 (594)
Q Consensus 150 ~l~~N~l~~-~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~l~~l~~l~l~~N~~ 203 (594)
+|++|.+++ .+|..+..+++|+.|+|++|++++.++.. ..+++|+.|++++|+.
T Consensus 156 ~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l 211 (306)
T 2z66_A 156 KMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNF 211 (306)
T ss_dssp ECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCC
T ss_pred ECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCcc
Confidence 666666664 45666666666666666666666665433 5566666666666654
No 324
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.64 E-value=5.6e-16 Score=141.33 Aligned_cols=110 Identities=21% Similarity=0.223 Sum_probs=95.9
Q ss_pred EEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhhCCCCCceEeccCC
Q 007668 75 ITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLDISSN 154 (594)
Q Consensus 75 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N 154 (594)
+.+++++|+|+ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 57899999998 6777664 89999999999999888889999999999999999999666666789999999999999
Q ss_pred cCCCCCCccccccCCCcEEEeecccccccCCCC
Q 007668 155 SLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSD 187 (594)
Q Consensus 155 ~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~ 187 (594)
+|+++.+..|..+++|+.|+|++|+|...++..
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~~~ 124 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCECRDI 124 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTTBGGG
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcccccccH
Confidence 999866667999999999999999998765543
No 325
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.64 E-value=5.8e-16 Score=140.75 Aligned_cols=109 Identities=19% Similarity=0.234 Sum_probs=99.0
Q ss_pred cCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhhCCCCCceEeccCCcCCCCCCccccccCCCcEEEee
Q 007668 97 QLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLDISSNSLSDYIPPSLGKLQRLITFNVS 176 (594)
Q Consensus 97 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~ 176 (594)
..+.|++++|+|+ .+|..+. ++|++|+|++|+|++..|..|..+++|++|+|++|+|+++.+..|..+++|++|+|+
T Consensus 10 ~~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 86 (170)
T 3g39_A 10 SGTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLN 86 (170)
T ss_dssp ETTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECC
Confidence 3578999999999 6887664 899999999999998888999999999999999999999777788999999999999
Q ss_pred cccccccCCC-CcccccCCcccccCCCCCCCCc
Q 007668 177 NNFLVGAIPS-DGVLTKFSESSFFGNRGLCGKQ 208 (594)
Q Consensus 177 ~N~l~~~~~~-~~~l~~l~~l~l~~N~~~c~~~ 208 (594)
+|+|++.++. ...+++|+.|++++|++.|.|+
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 87 DNQLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred CCccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 9999998886 4789999999999999999986
No 326
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.63 E-value=1.6e-16 Score=169.57 Aligned_cols=140 Identities=20% Similarity=0.136 Sum_probs=112.0
Q ss_pred CCcEEEEEcccCCCCCCCCccccCcc------------------------cCCeeecccCccCCCCCCCcCCCCccceee
Q 007668 71 NKRVITLSLTNHKLSGPISADLGKLD------------------------QLKFLNLHSNNFYGEIPSELGNCTELQGLS 126 (594)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~------------------------~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 126 (594)
.++|+.|+|++|.+++..+..|.+++ +|+.|+|++|+|+...+..|..+++|+.|+
T Consensus 175 l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 254 (477)
T 2id5_A 175 LHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLN 254 (477)
T ss_dssp CTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEE
T ss_pred cCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeE
Confidence 35666666666666655444555544 555556666667633335678889999999
Q ss_pred cccccccCCCChhhhCCCCCceEeccCCcCCCCCCccccccCCCcEEEeecccccccCCCC-cccccCCcccccCCCCCC
Q 007668 127 LQSNYLSGSIPSELGNLSNLLNLDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSD-GVLTKFSESSFFGNRGLC 205 (594)
Q Consensus 127 Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~l~~l~~l~l~~N~~~c 205 (594)
|++|.|++..+..|..+++|+.|+|++|+|+++.|..|..+++|+.|+|++|+|++.++.. ..+++|+.|++++|++.|
T Consensus 255 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c 334 (477)
T 2id5_A 255 LSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLAC 334 (477)
T ss_dssp CCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEEC
T ss_pred CCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccC
Confidence 9999999777778899999999999999999988999999999999999999999887765 778999999999999999
Q ss_pred CCccc
Q 007668 206 GKQIN 210 (594)
Q Consensus 206 ~~~~~ 210 (594)
+|++.
T Consensus 335 ~c~~~ 339 (477)
T 2id5_A 335 DCRLL 339 (477)
T ss_dssp SGGGH
T ss_pred ccchH
Confidence 98753
No 327
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.63 E-value=4.1e-16 Score=142.26 Aligned_cols=107 Identities=21% Similarity=0.291 Sum_probs=98.2
Q ss_pred CeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhhCCCCCceEeccCCcCCCCCCccccccCCCcEEEeecc
Q 007668 99 KFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLDISSNSLSDYIPPSLGKLQRLITFNVSNN 178 (594)
Q Consensus 99 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N 178 (594)
+.+++++|+|+ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|+++.+..|..+++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 68999999998 7887775 89999999999999888999999999999999999999966677899999999999999
Q ss_pred cccccCCC-CcccccCCcccccCCCCCCCCc
Q 007668 179 FLVGAIPS-DGVLTKFSESSFFGNRGLCGKQ 208 (594)
Q Consensus 179 ~l~~~~~~-~~~l~~l~~l~l~~N~~~c~~~ 208 (594)
+|+++++. ...+++|+.|++++|++.|.++
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~ 122 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCECR 122 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTTBG
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcccccc
Confidence 99998886 5889999999999999999986
No 328
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.63 E-value=2.2e-16 Score=147.42 Aligned_cols=128 Identities=16% Similarity=0.206 Sum_probs=115.3
Q ss_pred CCcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhhCCCCCceEe
Q 007668 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLD 150 (594)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 150 (594)
.++|+.|+|++|+|+ .+| .+..+++|++|+|++|.++ .+ ..+..+++|++|+|++|.+++..|..|..+++|++|+
T Consensus 43 l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~-~~-~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~ 118 (197)
T 4ezg_A 43 MNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT-NY-NPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLD 118 (197)
T ss_dssp HHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS-CC-GGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEE
T ss_pred cCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC-cc-hhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEE
Confidence 467999999999999 666 6999999999999999876 33 4799999999999999999987899999999999999
Q ss_pred ccCCcCCCCCCccccccCCCcEEEeeccc-ccccCCCCcccccCCcccccCCCC
Q 007668 151 ISSNSLSDYIPPSLGKLQRLITFNVSNNF-LVGAIPSDGVLTKFSESSFFGNRG 203 (594)
Q Consensus 151 l~~N~l~~~~~~~~~~l~~L~~l~l~~N~-l~~~~~~~~~l~~l~~l~l~~N~~ 203 (594)
|++|++++..|..+..+++|+.|+|++|+ ++. ++....+++|+.|++++|+.
T Consensus 119 Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~-~~~l~~l~~L~~L~l~~n~i 171 (197)
T 4ezg_A 119 ISHSAHDDSILTKINTLPKVNSIDLSYNGAITD-IMPLKTLPELKSLNIQFDGV 171 (197)
T ss_dssp CCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCC-CGGGGGCSSCCEEECTTBCC
T ss_pred ecCCccCcHhHHHHhhCCCCCEEEccCCCCccc-cHhhcCCCCCCEEECCCCCC
Confidence 99999998788999999999999999998 655 45678899999999999974
No 329
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.63 E-value=5.8e-16 Score=172.78 Aligned_cols=134 Identities=25% Similarity=0.218 Sum_probs=115.9
Q ss_pred CCcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhhCCCCCceEe
Q 007668 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLD 150 (594)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 150 (594)
+++|++|+|++|.|++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.+++..+..|.++++|++|+
T Consensus 24 ~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 103 (680)
T 1ziw_A 24 PTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELH 103 (680)
T ss_dssp CTTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEE
T ss_pred CCCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEE
Confidence 36789999999999987777899999999999999999988888899999999999999999955455789999999999
Q ss_pred ccCCcCCCCCCccccccCCCcEEEeecccccccCCCC-cccccCCcccccCCCCC
Q 007668 151 ISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSD-GVLTKFSESSFFGNRGL 204 (594)
Q Consensus 151 l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~l~~l~~l~l~~N~~~ 204 (594)
|++|+++++.|..|.++++|++|+|++|.+++.++.. ..+++|+.|++++|...
T Consensus 104 L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 158 (680)
T 1ziw_A 104 LMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQ 158 (680)
T ss_dssp CCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCC
T ss_pred CCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCccc
Confidence 9999999877788999999999999999998887764 77889999999988753
No 330
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.62 E-value=1.4e-15 Score=154.03 Aligned_cols=143 Identities=11% Similarity=0.079 Sum_probs=101.5
Q ss_pred HHHhcCCCccceeeeecceEEEEEEecCCcEEEEEeecccch--------------hhH--------HHHHHHHHHHhhC
Q 007668 303 IKKLETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNE--------------GFD--------RFFERELEILGSI 360 (594)
Q Consensus 303 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------------~~~--------~~~~~E~~~l~~l 360 (594)
...-.-|.+.+.||+|+||.||+|...+|+.||||+++.... ... ....+|...|.++
T Consensus 91 ~~rg~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL 170 (397)
T 4gyi_A 91 AARKDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKAL 170 (397)
T ss_dssp HHTTSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHCCCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHH
Confidence 333334888899999999999999999999999998753100 000 1123566667776
Q ss_pred CCCeeeeeeeEEeCCCceEEEEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEe
Q 007668 361 KHRYLVNLRGYCNSPTSKLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILL 440 (594)
Q Consensus 361 ~h~niv~l~g~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll 440 (594)
.+.++....-+.. ...++||||++++.|.+.... .....++.|++.+|.|||+. +||||||||.|||+
T Consensus 171 ~~~gv~vp~p~~~--~~~~LVME~i~G~~L~~l~~~-------~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl 238 (397)
T 4gyi_A 171 YEEGFPVPEPIAQ--SRHTIVMSLVDALPMRQVSSV-------PDPASLYADLIALILRLAKH---GLIHGDFNEFNILI 238 (397)
T ss_dssp HHTTCSCCCEEEE--ETTEEEEECCSCEEGGGCCCC-------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEE
T ss_pred HhcCCCCCeeeec--cCceEEEEecCCccHhhhccc-------HHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEE
Confidence 5444322111111 234799999999988776432 12356889999999999954 99999999999999
Q ss_pred cCCC----------cEEEeeccccccc
Q 007668 441 DGNL----------EARVSDFGLAKLL 457 (594)
Q Consensus 441 ~~~~----------~~~l~Dfgl~~~~ 457 (594)
++++ .+.|+||+-+...
T Consensus 239 ~~dgd~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 239 REEKDAEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp EEEECSSCTTSEEEEEEECCCTTCEET
T ss_pred eCCCCcccccccccceEEEEeCCcccC
Confidence 8776 3899999976543
No 331
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.62 E-value=8.3e-16 Score=155.69 Aligned_cols=141 Identities=21% Similarity=0.286 Sum_probs=123.1
Q ss_pred CCccceeEeCC----------CCcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeeccc
Q 007668 60 PCNWKGVKCDK----------NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQS 129 (594)
Q Consensus 60 ~c~w~gv~c~~----------~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 129 (594)
.|.|+.+.|.. .++++.|+|++|+|++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++
T Consensus 30 ~c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 109 (330)
T 1xku_A 30 QCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSK 109 (330)
T ss_dssp EEETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred cCCCeEEEecCCCccccCccCCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCC
Confidence 46889999863 35799999999999987777999999999999999999988899999999999999999
Q ss_pred ccccCCCChhhhCCCCCceEeccCCcCCCCCCccccccCCCcEEEeecccccc--cCCC-CcccccCCcccccCCCC
Q 007668 130 NYLSGSIPSELGNLSNLLNLDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVG--AIPS-DGVLTKFSESSFFGNRG 203 (594)
Q Consensus 130 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~--~~~~-~~~l~~l~~l~l~~N~~ 203 (594)
|.|+ .+|..+. ++|++|++++|++++..+..+.++++|+.|++++|+++. ..+. ...+++|+.|++++|..
T Consensus 110 n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l 183 (330)
T 1xku_A 110 NQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNI 183 (330)
T ss_dssp SCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCC
T ss_pred CcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcc
Confidence 9999 6776654 799999999999998777789999999999999999964 4443 37789999999999874
No 332
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.62 E-value=1e-15 Score=155.10 Aligned_cols=140 Identities=23% Similarity=0.273 Sum_probs=120.4
Q ss_pred CccceeEeCC----------CCcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccc
Q 007668 61 CNWKGVKCDK----------NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSN 130 (594)
Q Consensus 61 c~w~gv~c~~----------~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 130 (594)
|.|..+.|.. .++++.|+|++|.|++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|
T Consensus 33 c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 112 (332)
T 2ft3_A 33 CHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKN 112 (332)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSS
T ss_pred ccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCC
Confidence 6899999863 257999999999999777889999999999999999999888889999999999999999
Q ss_pred cccCCCChhhhCCCCCceEeccCCcCCCCCCccccccCCCcEEEeecccccc--cCCCC-cccccCCcccccCCCCC
Q 007668 131 YLSGSIPSELGNLSNLLNLDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVG--AIPSD-GVLTKFSESSFFGNRGL 204 (594)
Q Consensus 131 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~--~~~~~-~~l~~l~~l~l~~N~~~ 204 (594)
.++ .+|..+. ++|++|+|++|+|++..+..|..+++|+.|++++|.++. ..+.. ..+ +|+.|++++|...
T Consensus 113 ~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~ 185 (332)
T 2ft3_A 113 HLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLT 185 (332)
T ss_dssp CCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCS
T ss_pred cCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCC
Confidence 999 6776655 899999999999998777779999999999999999964 44443 445 8999999998743
No 333
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.61 E-value=9.7e-16 Score=165.91 Aligned_cols=121 Identities=24% Similarity=0.273 Sum_probs=109.6
Q ss_pred cEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhhCCCCCceEecc
Q 007668 73 RVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLDIS 152 (594)
Q Consensus 73 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 152 (594)
.|+.|+|++|+|++ +|. |+++++|+.|+|++|+|+ .+|..|+++++|+.|+|++|+|++ +| .|..+++|+.|+|+
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLC 516 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECC
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECC
Confidence 58899999999995 676 999999999999999999 889999999999999999999995 77 89999999999999
Q ss_pred CCcCCCCC-CccccccCCCcEEEeecccccccCCCCc----ccccCCcccc
Q 007668 153 SNSLSDYI-PPSLGKLQRLITFNVSNNFLVGAIPSDG----VLTKFSESSF 198 (594)
Q Consensus 153 ~N~l~~~~-~~~~~~l~~L~~l~l~~N~l~~~~~~~~----~l~~l~~l~l 198 (594)
+|+|++.. |..+..+++|+.|+|++|+|++.++... .+++|+.|++
T Consensus 517 ~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 517 NNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp SSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred CCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 99999976 9999999999999999999999988653 3677877753
No 334
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.61 E-value=3.2e-16 Score=173.02 Aligned_cols=144 Identities=21% Similarity=0.234 Sum_probs=128.3
Q ss_pred CCccceeEe--CCCCcEEEEEcccCCCCCC-----------------CCcccc--CcccCCeeecccCccCCCCCCCcCC
Q 007668 60 PCNWKGVKC--DKNKRVITLSLTNHKLSGP-----------------ISADLG--KLDQLKFLNLHSNNFYGEIPSELGN 118 (594)
Q Consensus 60 ~c~w~gv~c--~~~~~l~~L~L~~n~l~~~-----------------~~~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~ 118 (594)
.+...|+.- ...++|++|+|++|.|++. +|..++ ++++|++|+|++|++.+.+|..|.+
T Consensus 192 ~n~l~~ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~ 271 (636)
T 4eco_A 192 SNNITFVSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKA 271 (636)
T ss_dssp SCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTT
T ss_pred cCCCccCCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhc
Confidence 345566432 2467999999999999985 999999 9999999999999999999999999
Q ss_pred CCccceeeccccc-ccC-CCChhhhCC------CCCceEeccCCcCCCCCCc--cccccCCCcEEEeecccccccCCCCc
Q 007668 119 CTELQGLSLQSNY-LSG-SIPSELGNL------SNLLNLDISSNSLSDYIPP--SLGKLQRLITFNVSNNFLVGAIPSDG 188 (594)
Q Consensus 119 l~~L~~L~Ls~N~-l~~-~~p~~~~~l------~~L~~L~l~~N~l~~~~~~--~~~~l~~L~~l~l~~N~l~~~~~~~~ 188 (594)
+++|++|+|++|+ +++ .+|..+..+ ++|++|+|++|+++ .+|. .+.++++|+.|+|++|+++|.+|...
T Consensus 272 l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip~~~ 350 (636)
T 4eco_A 272 LPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLPAFG 350 (636)
T ss_dssp CSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECCCCE
T ss_pred CCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchhhhC
Confidence 9999999999998 998 899988887 99999999999999 5888 89999999999999999997777668
Q ss_pred ccccCCcccccCCCCC
Q 007668 189 VLTKFSESSFFGNRGL 204 (594)
Q Consensus 189 ~l~~l~~l~l~~N~~~ 204 (594)
.+++|+.|++++|...
T Consensus 351 ~l~~L~~L~L~~N~l~ 366 (636)
T 4eco_A 351 SEIKLASLNLAYNQIT 366 (636)
T ss_dssp EEEEESEEECCSSEEE
T ss_pred CCCCCCEEECCCCccc
Confidence 8999999999999754
No 335
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.60 E-value=9.5e-16 Score=166.54 Aligned_cols=134 Identities=22% Similarity=0.218 Sum_probs=100.7
Q ss_pred CcEEEEEcccCCCCCCCC--ccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhh---------
Q 007668 72 KRVITLSLTNHKLSGPIS--ADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSEL--------- 140 (594)
Q Consensus 72 ~~l~~L~L~~n~l~~~~~--~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~--------- 140 (594)
++|+.|+|++|+|++..+ ..+..+++|++|+|++|+|+ .+|..+..+++|++|+|++|+|+ .+|..+
T Consensus 361 ~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~-~l~~~~~~~L~~L~L 438 (549)
T 2z81_A 361 PSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIR-VVKTCIPQTLEVLDV 438 (549)
T ss_dssp TTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCS-CCCTTSCTTCSEEEC
T ss_pred ccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCcc-cccchhcCCceEEEC
Confidence 456666666666664322 34666777777777777777 56666777777777777777766 333221
Q ss_pred ---------hCCCCCceEeccCCcCCCCCCccccccCCCcEEEeecccccccCCCC-cccccCCcccccCCCCCCCCcc
Q 007668 141 ---------GNLSNLLNLDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSD-GVLTKFSESSFFGNRGLCGKQI 209 (594)
Q Consensus 141 ---------~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~l~~l~~l~l~~N~~~c~~~~ 209 (594)
..+++|++|+|++|+|+. +|. ...+++|+.|+|++|+|++.++.. ..+++|+.|++++|++.|+||.
T Consensus 439 s~N~l~~~~~~l~~L~~L~Ls~N~l~~-ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 515 (549)
T 2z81_A 439 SNNNLDSFSLFLPRLQELYISRNKLKT-LPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 515 (549)
T ss_dssp CSSCCSCCCCCCTTCCEEECCSSCCSS-CCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHHH
T ss_pred CCCChhhhcccCChhcEEECCCCccCc-CCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCcc
Confidence 267889999999999985 665 568999999999999999988874 8899999999999999999883
No 336
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.59 E-value=1.4e-15 Score=165.83 Aligned_cols=134 Identities=19% Similarity=0.178 Sum_probs=114.3
Q ss_pred CCcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhhCCCCCceEe
Q 007668 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLD 150 (594)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 150 (594)
+++++.|+|++|+|++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|.+++..|..|.++++|++|+
T Consensus 27 ~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (570)
T 2z63_A 27 PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 106 (570)
T ss_dssp CSSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEE
T ss_pred cccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccc
Confidence 45788999999999977777899999999999999999877778899999999999999999877778899999999999
Q ss_pred ccCCcCCCCCCccccccCCCcEEEeeccccccc-CC-CCcccccCCcccccCCCCC
Q 007668 151 ISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGA-IP-SDGVLTKFSESSFFGNRGL 204 (594)
Q Consensus 151 l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~-~~-~~~~l~~l~~l~l~~N~~~ 204 (594)
|++|++++..+..+.++++|++|+|++|.+++. .| ....+++|+.|++++|+..
T Consensus 107 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~ 162 (570)
T 2z63_A 107 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQ 162 (570)
T ss_dssp CTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCC
T ss_pred ccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccc
Confidence 999999886666788999999999999999873 24 4477889999999988753
No 337
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.59 E-value=4.6e-16 Score=156.30 Aligned_cols=130 Identities=18% Similarity=0.118 Sum_probs=63.1
Q ss_pred CcEEEEEcccCCCCCCCCccccCc-----ccCCeeecccCccCCCCCCCcCCCCccceeecccccccCC--CChhh--hC
Q 007668 72 KRVITLSLTNHKLSGPISADLGKL-----DQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGS--IPSEL--GN 142 (594)
Q Consensus 72 ~~l~~L~L~~n~l~~~~~~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~--~p~~~--~~ 142 (594)
++|++|+|++|+|++. |..+..+ ++|++|+|++|+|++..|..|.++++|++|+|++|++.+. +|..+ ..
T Consensus 121 ~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~ 199 (312)
T 1wwl_A 121 PDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLK 199 (312)
T ss_dssp CCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTS
T ss_pred CCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhcc
Confidence 4455555555555543 4444444 5555555555555544445555555555555555554433 12222 45
Q ss_pred CCCCceEeccCCcCCCC--CC-ccccccCCCcEEEeecccccccCC--CCcccccCCcccccCCC
Q 007668 143 LSNLLNLDISSNSLSDY--IP-PSLGKLQRLITFNVSNNFLVGAIP--SDGVLTKFSESSFFGNR 202 (594)
Q Consensus 143 l~~L~~L~l~~N~l~~~--~~-~~~~~l~~L~~l~l~~N~l~~~~~--~~~~l~~l~~l~l~~N~ 202 (594)
+++|++|+|++|+|++. ++ ..+..+++|+.|+|++|+|++.++ ....+++|+.|++++|.
T Consensus 200 l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~ 264 (312)
T 1wwl_A 200 FPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTG 264 (312)
T ss_dssp CTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSC
T ss_pred CCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCc
Confidence 55555555555555521 11 122344555555555555555442 12334555555555554
No 338
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.59 E-value=2.5e-15 Score=155.95 Aligned_cols=131 Identities=18% Similarity=0.112 Sum_probs=118.2
Q ss_pred CCcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhhCCCCCceEe
Q 007668 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLD 150 (594)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 150 (594)
.++|++|+|++|.|++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.++...+..|..+++|++|+
T Consensus 68 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 147 (390)
T 3o6n_A 68 FRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLS 147 (390)
T ss_dssp CCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEE
Confidence 46899999999999977778999999999999999999988888899999999999999999954445579999999999
Q ss_pred ccCCcCCCCCCccccccCCCcEEEeecccccccCCCCcccccCCcccccCCCC
Q 007668 151 ISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNRG 203 (594)
Q Consensus 151 l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~ 203 (594)
|++|++++..|..+..+++|+.|+|++|++++.. ...+++|+.|++++|..
T Consensus 148 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~--~~~l~~L~~L~l~~n~l 198 (390)
T 3o6n_A 148 MSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD--LSLIPSLFHANVSYNLL 198 (390)
T ss_dssp CCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCC--GGGCTTCSEEECCSSCC
T ss_pred CCCCccCccChhhccCCCCCCEEECCCCcCCccc--cccccccceeecccccc
Confidence 9999999988888999999999999999999763 46788999999998864
No 339
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.59 E-value=7e-16 Score=148.60 Aligned_cols=130 Identities=16% Similarity=0.098 Sum_probs=113.8
Q ss_pred CCcEEEEEcccCC-CCCCCCccccCcccCCeeeccc-CccCCCCCCCcCCCCccceeecccccccCCCChhhhCCCCCc-
Q 007668 71 NKRVITLSLTNHK-LSGPISADLGKLDQLKFLNLHS-NNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLL- 147 (594)
Q Consensus 71 ~~~l~~L~L~~n~-l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~- 147 (594)
.++|++|+|++|+ +++..+..|.++++|++|+|++ |+|++..+..|.++++|++|+|++|.+++ +|. |..+++|+
T Consensus 54 l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~ 131 (239)
T 2xwt_C 54 LPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDI 131 (239)
T ss_dssp CTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCS
T ss_pred CCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-ccccccccc
Confidence 5789999999997 8866667899999999999998 99997667789999999999999999994 776 88888888
Q ss_pred --eEeccCC-cCCCCCCccccccCCCc-EEEeecccccccCCCCcccccCCcccccCCC
Q 007668 148 --NLDISSN-SLSDYIPPSLGKLQRLI-TFNVSNNFLVGAIPSDGVLTKFSESSFFGNR 202 (594)
Q Consensus 148 --~L~l~~N-~l~~~~~~~~~~l~~L~-~l~l~~N~l~~~~~~~~~l~~l~~l~l~~N~ 202 (594)
+|++++| +++++.+..|..+++|+ .|++++|+++.+++.....++|+.|++++|+
T Consensus 132 L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~~~L~~L~L~~n~ 190 (239)
T 2xwt_C 132 FFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNGTKLDAVYLNKNK 190 (239)
T ss_dssp EEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTTCEEEEEECTTCT
T ss_pred ccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCCCCCCEEEcCCCC
Confidence 9999999 99987777899999999 9999999999777665444889999999995
No 340
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.59 E-value=1.3e-15 Score=152.89 Aligned_cols=130 Identities=20% Similarity=0.146 Sum_probs=91.2
Q ss_pred CCcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCC--C--CCCcCCCCccceeecccccccCCCCh----hhhC
Q 007668 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGE--I--PSELGNCTELQGLSLQSNYLSGSIPS----ELGN 142 (594)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~--~--p~~~~~l~~L~~L~Ls~N~l~~~~p~----~~~~ 142 (594)
.++|++|+|++|+|++..+..|.++++|++|+|++|++.+. + +..+..+++|++|+|++|+|+ .++. .+..
T Consensus 144 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~ 222 (310)
T 4glp_A 144 KPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAA 222 (310)
T ss_dssp CSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHH
T ss_pred ccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhc
Confidence 45777788888888777777777778888888888876531 2 223467777888888888776 4443 2466
Q ss_pred CCCCceEeccCCcCCCCCCcccccc---CCCcEEEeecccccccCCCCcccccCCcccccCCCC
Q 007668 143 LSNLLNLDISSNSLSDYIPPSLGKL---QRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNRG 203 (594)
Q Consensus 143 l~~L~~L~l~~N~l~~~~~~~~~~l---~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~ 203 (594)
+++|++|+|++|+|++..|..+..+ ++|++|+|++|+|+.++... .++|+.|++++|+.
T Consensus 223 l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~--~~~L~~L~Ls~N~l 284 (310)
T 4glp_A 223 GVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLEQVPKGL--PAKLRVLDLSSNRL 284 (310)
T ss_dssp TCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCCSCCSCC--CSCCSCEECCSCCC
T ss_pred CCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCCchhhhh--cCCCCEEECCCCcC
Confidence 7788888888888877667666665 57888888888887554433 26777888887764
No 341
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.59 E-value=2e-15 Score=147.48 Aligned_cols=126 Identities=23% Similarity=0.260 Sum_probs=104.8
Q ss_pred CCcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhhCCCCCceEe
Q 007668 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLD 150 (594)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 150 (594)
.++|+.|+|++|+|++..+ +.++++|++|+|++|+|++ +|. +.. ++|+.|+|++|+|++ ++ .+..+++|+.|+
T Consensus 62 l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~-l~~-~~~-~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~ 134 (263)
T 1xeu_A 62 FTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKN-LNG-IPS-ACLSRLFLDNNELRD-TD-SLIHLKNLEILS 134 (263)
T ss_dssp CTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSC-CTT-CCC-SSCCEEECCSSCCSB-SG-GGTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCC-cCc-ccc-CcccEEEccCCccCC-Ch-hhcCcccccEEE
Confidence 4689999999999996544 8899999999999999984 553 333 899999999999984 44 588999999999
Q ss_pred ccCCcCCCCCCccccccCCCcEEEeecccccccCCCCcccccCCcccccCCCCCCC
Q 007668 151 ISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNRGLCG 206 (594)
Q Consensus 151 l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~~c~ 206 (594)
|++|+|++. + .+..+++|+.|+|++|+|++. +....+++|+.|++++|++.|.
T Consensus 135 Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~-~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 135 IRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT-GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp CTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC-TTSTTCCCCCEEEEEEEEEECC
T ss_pred CCCCcCCCC-h-HHccCCCCCEEECCCCcCcch-HHhccCCCCCEEeCCCCcccCC
Confidence 999999874 4 688999999999999999887 5567889999999999987654
No 342
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.59 E-value=2.5e-15 Score=164.84 Aligned_cols=131 Identities=18% Similarity=0.112 Sum_probs=119.3
Q ss_pred CCcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhhCCCCCceEe
Q 007668 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLD 150 (594)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 150 (594)
.++|+.|+|++|.|++..+..|+++++|++|+|++|.|++..|..|+++++|++|+|++|.|++..+..|.++++|++|+
T Consensus 74 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 153 (597)
T 3oja_B 74 FRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLS 153 (597)
T ss_dssp CCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEE
Confidence 36899999999999988888999999999999999999988888899999999999999999965556679999999999
Q ss_pred ccCCcCCCCCCccccccCCCcEEEeecccccccCCCCcccccCCcccccCCCC
Q 007668 151 ISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNRG 203 (594)
Q Consensus 151 l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~ 203 (594)
|++|.|++..|..|..+++|+.|+|++|.|++.. ...+++|+.|++++|..
T Consensus 154 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~--~~~l~~L~~L~l~~n~l 204 (597)
T 3oja_B 154 MSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD--LSLIPSLFHANVSYNLL 204 (597)
T ss_dssp CCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC--GGGCTTCSEEECCSSCC
T ss_pred eeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC--hhhhhhhhhhhcccCcc
Confidence 9999999988889999999999999999999864 45688899999988864
No 343
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.58 E-value=3.8e-15 Score=150.93 Aligned_cols=131 Identities=18% Similarity=0.186 Sum_probs=76.7
Q ss_pred cEEEEEcccCCCCCCCCccccCcccCCeeecccCccC--CCCCCCcCCC--------------------Cccceeecccc
Q 007668 73 RVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFY--GEIPSELGNC--------------------TELQGLSLQSN 130 (594)
Q Consensus 73 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~--~~~p~~~~~l--------------------~~L~~L~Ls~N 130 (594)
+|++|+|++|.|++..+..|.++++|+.|+|++|.++ +..|..|..+ ++|++|+|++|
T Consensus 124 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~L~~L~l~~n~l~~l~~~~~~~L~~L~l~~n 203 (332)
T 2ft3_A 124 SLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIPKDLPETLNELHLDHN 203 (332)
T ss_dssp TCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSCCCSCCBCCSSBCSSCCSSSCSSCSCCBCCSS
T ss_pred cCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCCccCEEECcCCCCCccCccccCCCCEEECCCC
Confidence 4555555555555444445666666666666666664 2444444443 34555555555
Q ss_pred cccCCCChhhhCCCCCceEeccCCcCCCCCCccccccCCCcEEEeecccccccCCCCcccccCCcccccCCCC
Q 007668 131 YLSGSIPSELGNLSNLLNLDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNRG 203 (594)
Q Consensus 131 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~ 203 (594)
.+++..+..|..+++|+.|+|++|+|++..+..+..+++|+.|+|++|+|+.++.....+++|+.|++++|+.
T Consensus 204 ~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~L~~L~l~~N~l 276 (332)
T 2ft3_A 204 KIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLSRVPAGLPDLKLLQVVYLHTNNI 276 (332)
T ss_dssp CCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCCBCCTTGGGCTTCCEEECCSSCC
T ss_pred cCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCeecChhhhcCccCCEEECCCCCC
Confidence 5554444556666666666666666666555566666666666666666665544455666666666666654
No 344
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.58 E-value=2.2e-15 Score=164.15 Aligned_cols=134 Identities=21% Similarity=0.151 Sum_probs=117.3
Q ss_pred eeEeCCCCcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhhCCC
Q 007668 65 GVKCDKNKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLS 144 (594)
Q Consensus 65 gv~c~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 144 (594)
++..+-.+++++|+|++|.|++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|+ .+|.. .++
T Consensus 45 ~ip~~~~~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~ 121 (562)
T 3a79_B 45 HVPKDLPPRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMA 121 (562)
T ss_dssp SCCTTSCTTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCT
T ss_pred cCCCCCCCCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccc
Confidence 333333478999999999999888889999999999999999999888999999999999999999999 67776 899
Q ss_pred CCceEeccCCcCCCC-CCccccccCCCcEEEeecccccccCCCCcccccC--CcccccCCCC
Q 007668 145 NLLNLDISSNSLSDY-IPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKF--SESSFFGNRG 203 (594)
Q Consensus 145 ~L~~L~l~~N~l~~~-~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l--~~l~l~~N~~ 203 (594)
+|++|+|++|+|++. +|..|.++++|++|+|++|++++. ....+++| +.|++++|+.
T Consensus 122 ~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~--~~~~l~~L~L~~L~L~~n~l 181 (562)
T 3a79_B 122 SLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL--DLLPVAHLHLSCILLDLVSY 181 (562)
T ss_dssp TCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT--TTGGGTTSCEEEEEEEESSC
T ss_pred cCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC--chhhhhhceeeEEEeecccc
Confidence 999999999999973 468999999999999999999863 34566677 9999999975
No 345
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.58 E-value=2.1e-15 Score=153.84 Aligned_cols=135 Identities=19% Similarity=0.160 Sum_probs=108.4
Q ss_pred CccceeEeCCCCcEEEEEcccC-CCCCCCCccccCcccCCeeeccc-CccCCCCCCCcCCCCccceeecccccccCCCCh
Q 007668 61 CNWKGVKCDKNKRVITLSLTNH-KLSGPISADLGKLDQLKFLNLHS-NNFYGEIPSELGNCTELQGLSLQSNYLSGSIPS 138 (594)
Q Consensus 61 c~w~gv~c~~~~~l~~L~L~~n-~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 138 (594)
|.|..|.| +++ +|+ .+|. |..+++|+.|+|++ |+|++..|..|.+|++|+.|+|++|+|++..|.
T Consensus 8 C~~~~v~~-----------~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 74 (347)
T 2ifg_A 8 HGSSGLRC-----------TRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPD 74 (347)
T ss_dssp SSSSCEEC-----------CSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTT
T ss_pred ccCCEEEc-----------CCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHH
Confidence 77766655 455 788 5777 99999999999996 999977778899999999999999999998889
Q ss_pred hhhCCCCCceEeccCCcCCCCCCccccccCCCcEEEeecccccccCCCC--cccccCCcccccCCCCCCCCcc
Q 007668 139 ELGNLSNLLNLDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSD--GVLTKFSESSFFGNRGLCGKQI 209 (594)
Q Consensus 139 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~--~~l~~l~~l~l~~N~~~c~~~~ 209 (594)
.|.+|++|+.|+|++|+|+++.+..|..++ |+.|+|++|+|....... ..+.+.....+..+...|..|.
T Consensus 75 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c~l~~~~~~~~~~~~~l~~~~~~C~~~~ 146 (347)
T 2ifg_A 75 AFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLHCSCALRWLQRWEEEGLGGVPEQKLQCHGQG 146 (347)
T ss_dssp GGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCCCCGGGHHHHHHHHTTCSSCGGGCCCCSSSS
T ss_pred HhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCccCCCccHHHHHHHHhCcccccccCCCCCCCh
Confidence 999999999999999999986666676666 999999999998654311 2222334445566777787664
No 346
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.58 E-value=8e-16 Score=154.53 Aligned_cols=131 Identities=24% Similarity=0.153 Sum_probs=110.3
Q ss_pred CcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCC--CCCCc--CCCCccceeecccccccC--CCC-hhhhCCC
Q 007668 72 KRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGE--IPSEL--GNCTELQGLSLQSNYLSG--SIP-SELGNLS 144 (594)
Q Consensus 72 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~--~p~~~--~~l~~L~~L~Ls~N~l~~--~~p-~~~~~l~ 144 (594)
++|++|+|++|+|++..+..|+++++|++|+|++|++.+. +|..+ ..+++|++|+|++|+|++ .++ ..+..++
T Consensus 149 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~ 228 (312)
T 1wwl_A 149 PGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARV 228 (312)
T ss_dssp TTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTC
T ss_pred CCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCC
Confidence 7899999999999988889999999999999999998765 23334 899999999999999983 122 3456889
Q ss_pred CCceEeccCCcCCCCCC-ccccccCCCcEEEeecccccccCCCCcccccCCcccccCCCCC
Q 007668 145 NLLNLDISSNSLSDYIP-PSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNRGL 204 (594)
Q Consensus 145 ~L~~L~l~~N~l~~~~~-~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~~ 204 (594)
+|++|+|++|+|++..| ..+..+++|+.|+|++|+|+.++.... ++|+.|++++|+..
T Consensus 229 ~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~ip~~~~--~~L~~L~Ls~N~l~ 287 (312)
T 1wwl_A 229 QLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLKQVPKGLP--AKLSVLDLSYNRLD 287 (312)
T ss_dssp CCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCSSCCSSCC--SEEEEEECCSSCCC
T ss_pred CCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccChhhhhcc--CCceEEECCCCCCC
Confidence 99999999999998775 567778999999999999996655444 89999999999753
No 347
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.58 E-value=8.4e-16 Score=157.23 Aligned_cols=133 Identities=16% Similarity=0.156 Sum_probs=118.5
Q ss_pred CCCcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCCh--hhhCCCCCc
Q 007668 70 KNKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPS--ELGNLSNLL 147 (594)
Q Consensus 70 ~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~--~~~~l~~L~ 147 (594)
..++|+.|+|++|+|++..+..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+++ .+|. .|..+++|+
T Consensus 74 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~ 152 (353)
T 2z80_A 74 RCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQ 152 (353)
T ss_dssp TCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCC
T ss_pred cCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCc
Confidence 3578999999999999888889999999999999999999555555999999999999999999 5555 789999999
Q ss_pred eEeccCC-cCCCCCCccccccCCCcEEEeecccccccCCCC-cccccCCcccccCCCC
Q 007668 148 NLDISSN-SLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSD-GVLTKFSESSFFGNRG 203 (594)
Q Consensus 148 ~L~l~~N-~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~l~~l~~l~l~~N~~ 203 (594)
+|++++| .+++..+..+..+++|+.|++++|++++..+.. ..+++|+.|++++|..
T Consensus 153 ~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l 210 (353)
T 2z80_A 153 ILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQH 210 (353)
T ss_dssp EEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCS
T ss_pred EEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCcc
Confidence 9999999 578767889999999999999999999986654 8899999999999873
No 348
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.58 E-value=4.9e-15 Score=150.02 Aligned_cols=131 Identities=19% Similarity=0.184 Sum_probs=71.8
Q ss_pred CcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCC--CCCCCcCCCCccceeecc---------------------
Q 007668 72 KRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYG--EIPSELGNCTELQGLSLQ--------------------- 128 (594)
Q Consensus 72 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~Ls--------------------- 128 (594)
++|++|+|++|.+++..+..|.++++|++|+|++|.++. ..+..|.++++|++|+|+
T Consensus 121 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~l~~~~~~~L~~L~l~ 200 (330)
T 1xku_A 121 KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLPPSLTELHLD 200 (330)
T ss_dssp TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSCCSSCCTTCSEEECT
T ss_pred ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccccCCccccccCCEEECC
Confidence 456666666666665444455555566666666555532 344445555555555554
Q ss_pred cccccCCCChhhhCCCCCceEeccCCcCCCCCCccccccCCCcEEEeecccccccCCCCcccccCCcccccCCC
Q 007668 129 SNYLSGSIPSELGNLSNLLNLDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNR 202 (594)
Q Consensus 129 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~l~~N~ 202 (594)
+|.+++..|..|..+++|+.|+|++|+|++..+..+..+++|+.|+|++|+++..+.....+++|+.|++++|+
T Consensus 201 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~L~~L~l~~N~ 274 (330)
T 1xku_A 201 GNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPGGLADHKYIQVVYLHNNN 274 (330)
T ss_dssp TSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCSSCCTTTTTCSSCCEEECCSSC
T ss_pred CCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCccCChhhccCCCcCEEECCCCc
Confidence 45554444455555555555555555555544445555555555555555555444444555555555555554
No 349
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.57 E-value=4.4e-15 Score=147.40 Aligned_cols=124 Identities=28% Similarity=0.361 Sum_probs=97.1
Q ss_pred CCcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhhCCCCCceEe
Q 007668 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLD 150 (594)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 150 (594)
.++|+.|+|++|++++..+ +.++++|++|+|++|++++ +| .+..+++|++|+|++|++++ + ..+..+++|+.|+
T Consensus 67 l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~ 140 (291)
T 1h6t_A 67 LPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLY 140 (291)
T ss_dssp CTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEE
T ss_pred CCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCC-C-hhhcCCCCCCEEE
Confidence 4678888888888885444 8888888888888888874 44 48888888888888888884 3 4577888888888
Q ss_pred ccCCcCCCCCCccccccCCCcEEEeecccccccCCCCcccccCCcccccCCCC
Q 007668 151 ISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNRG 203 (594)
Q Consensus 151 l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~ 203 (594)
|++|+|++. ..+..+++|+.|+|++|++++.++ ...+++|+.|++++|+.
T Consensus 141 l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~-l~~l~~L~~L~L~~N~i 190 (291)
T 1h6t_A 141 LGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKNHI 190 (291)
T ss_dssp CCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSSCC
T ss_pred ccCCcCCcc--hhhccCCCCCEEEccCCccccchh-hcCCCccCEEECCCCcC
Confidence 888888874 567888888888888888887766 66778888888888864
No 350
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.57 E-value=1.2e-15 Score=172.02 Aligned_cols=142 Identities=18% Similarity=0.195 Sum_probs=124.5
Q ss_pred CccceeEe--CCCCcEEEEEcccCCCCC-----------------CCCcccc--CcccCCeeecccCccCCCCCCCcCCC
Q 007668 61 CNWKGVKC--DKNKRVITLSLTNHKLSG-----------------PISADLG--KLDQLKFLNLHSNNFYGEIPSELGNC 119 (594)
Q Consensus 61 c~w~gv~c--~~~~~l~~L~L~~n~l~~-----------------~~~~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l 119 (594)
+...|++- ...++|+.|+|++|.|++ .+|..++ ++++|++|+|++|++.+.+|..|.++
T Consensus 435 N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L 514 (876)
T 4ecn_A 435 NRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDL 514 (876)
T ss_dssp CEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGC
T ss_pred CcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCC
Confidence 44555542 246789999999999997 3888887 99999999999999999999999999
Q ss_pred Cccceeeccccc-ccC-CCChhhhCCC-------CCceEeccCCcCCCCCCc--cccccCCCcEEEeecccccccCCCCc
Q 007668 120 TELQGLSLQSNY-LSG-SIPSELGNLS-------NLLNLDISSNSLSDYIPP--SLGKLQRLITFNVSNNFLVGAIPSDG 188 (594)
Q Consensus 120 ~~L~~L~Ls~N~-l~~-~~p~~~~~l~-------~L~~L~l~~N~l~~~~~~--~~~~l~~L~~l~l~~N~l~~~~~~~~ 188 (594)
++|+.|+|++|+ +++ .+|..+..++ +|+.|+|++|+|+ .+|. .+.++++|+.|+|++|+++ .+|...
T Consensus 515 ~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp~~~ 592 (876)
T 4ecn_A 515 PELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLEAFG 592 (876)
T ss_dssp SSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCCCCC
T ss_pred CCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cchhhc
Confidence 999999999998 998 7898877766 9999999999999 5888 8999999999999999999 555778
Q ss_pred ccccCCcccccCCCCC
Q 007668 189 VLTKFSESSFFGNRGL 204 (594)
Q Consensus 189 ~l~~l~~l~l~~N~~~ 204 (594)
.+++|+.|++++|...
T Consensus 593 ~L~~L~~L~Ls~N~l~ 608 (876)
T 4ecn_A 593 TNVKLTDLKLDYNQIE 608 (876)
T ss_dssp TTSEESEEECCSSCCS
T ss_pred CCCcceEEECcCCccc
Confidence 8999999999999865
No 351
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.56 E-value=5.8e-15 Score=151.36 Aligned_cols=144 Identities=19% Similarity=0.118 Sum_probs=126.8
Q ss_pred CccceeEeCC----------CCcEEEEEcccCCCCCCCCcccc-CcccCCeeecccCccCCCCCCCcCCCCccceeeccc
Q 007668 61 CNWKGVKCDK----------NKRVITLSLTNHKLSGPISADLG-KLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQS 129 (594)
Q Consensus 61 c~w~gv~c~~----------~~~l~~L~L~~n~l~~~~~~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 129 (594)
|.+..+.|.. ...++.|+|++|+|++..+..|. ++++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 18 C~~~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 18 CASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp EETTEEECCSSCCSSCCSSCCTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred ECCCEEEeCCCCcCccCccCCCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 5677778853 35688999999999987777787 999999999999999977778899999999999999
Q ss_pred ccccCCCChhhhCCCCCceEeccCCcCCCCCCccccccCCCcEEEeecccccccCCCC----cccccCCcccccCCCCC
Q 007668 130 NYLSGSIPSELGNLSNLLNLDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSD----GVLTKFSESSFFGNRGL 204 (594)
Q Consensus 130 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~----~~l~~l~~l~l~~N~~~ 204 (594)
|+|++..+..|..+++|+.|+|++|+|+++.|..|..+++|+.|+|++|+|++.++.. ..+++|+.|+|++|+..
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~ 176 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLK 176 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCC
Confidence 9999777778999999999999999999988999999999999999999999877654 46899999999999753
No 352
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.56 E-value=1.5e-15 Score=152.34 Aligned_cols=130 Identities=20% Similarity=0.215 Sum_probs=109.9
Q ss_pred CCCcEEEEEcccCCCCCC--C--CccccCcccCCeeecccCccCCCCCC----CcCCCCccceeecccccccCCCChhhh
Q 007668 70 KNKRVITLSLTNHKLSGP--I--SADLGKLDQLKFLNLHSNNFYGEIPS----ELGNCTELQGLSLQSNYLSGSIPSELG 141 (594)
Q Consensus 70 ~~~~l~~L~L~~n~l~~~--~--~~~~~~l~~L~~L~L~~N~l~~~~p~----~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 141 (594)
..++|++|+|++|++.+. + +..+.++++|++|+|++|+|+ .+|. .+.++++|++|+|++|+|++..|..+.
T Consensus 167 ~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~ 245 (310)
T 4glp_A 167 AFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAP 245 (310)
T ss_dssp CCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCS
T ss_pred cCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHH
Confidence 357899999999998742 2 234578999999999999998 4444 257889999999999999988788887
Q ss_pred CC---CCCceEeccCCcCCCCCCccccccCCCcEEEeecccccccCCCCcccccCCcccccCCCCC
Q 007668 142 NL---SNLLNLDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNRGL 204 (594)
Q Consensus 142 ~l---~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~~ 204 (594)
.+ ++|++|+|++|+|+. +|..+. ++|+.|+|++|+|++.+ ....+++|+.|++++|++.
T Consensus 246 ~~~~~~~L~~L~Ls~N~l~~-lp~~~~--~~L~~L~Ls~N~l~~~~-~~~~l~~L~~L~L~~N~l~ 307 (310)
T 4glp_A 246 RCMWSSALNSLNLSFAGLEQ-VPKGLP--AKLRVLDLSSNRLNRAP-QPDELPEVDNLTLDGNPFL 307 (310)
T ss_dssp SCCCCTTCCCEECCSSCCCS-CCSCCC--SCCSCEECCSCCCCSCC-CTTSCCCCSCEECSSTTTS
T ss_pred hccCcCcCCEEECCCCCCCc-hhhhhc--CCCCEEECCCCcCCCCc-hhhhCCCccEEECcCCCCC
Confidence 77 699999999999995 777764 89999999999999863 3578899999999999864
No 353
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.55 E-value=4.2e-15 Score=148.89 Aligned_cols=129 Identities=26% Similarity=0.367 Sum_probs=102.3
Q ss_pred CCCCcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhhCCCCCce
Q 007668 69 DKNKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLN 148 (594)
Q Consensus 69 ~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 148 (594)
...++|+.|+|++|.|++ ++ .+.++++|++|+|++|++++ +| .+..+++|++|+|++|.+++ ++. +..+++|+.
T Consensus 82 ~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~ 155 (308)
T 1h6u_A 82 KNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITD-VT-PLAGLSNLQVLYLDLNQITN-ISP-LAGLTNLQY 155 (308)
T ss_dssp TTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCC-CG-GGTTCTTCCEEECCSSCCCC-CGG-GGGCTTCCE
T ss_pred ccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEECCCCCCCC-ch-hhcCCCCCCEEECCCCccCc-Ccc-ccCCCCccE
Confidence 345789999999999985 33 68888999999999999884 44 38888999999999998884 443 788888888
Q ss_pred EeccCCcCCCCCCccccccCCCcEEEeecccccccCCCCcccccCCcccccCCCCCCC
Q 007668 149 LDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNRGLCG 206 (594)
Q Consensus 149 L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~~c~ 206 (594)
|+|++|++++.. . +..+++|+.|+|++|++++.++ ...+++|+.|++++|+...-
T Consensus 156 L~l~~n~l~~~~-~-l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~L~~N~l~~~ 210 (308)
T 1h6u_A 156 LSIGNAQVSDLT-P-LANLSKLTTLKADDNKISDISP-LASLPNLIEVHLKNNQISDV 210 (308)
T ss_dssp EECCSSCCCCCG-G-GTTCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECTTSCCCBC
T ss_pred EEccCCcCCCCh-h-hcCCCCCCEEECCCCccCcChh-hcCCCCCCEEEccCCccCcc
Confidence 888888888743 3 7888888888888888887655 56788888888888875543
No 354
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.55 E-value=2.2e-15 Score=162.54 Aligned_cols=128 Identities=22% Similarity=0.231 Sum_probs=115.6
Q ss_pred CCcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhhCCCCCceEe
Q 007668 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLD 150 (594)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 150 (594)
.++|++|+|++|.|++..|..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|+ .+|.. .+++|++|+
T Consensus 20 ~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~ 96 (520)
T 2z7x_B 20 SQKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLD 96 (520)
T ss_dssp CTTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEE
T ss_pred cccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEe
Confidence 368999999999999888889999999999999999999888999999999999999999999 67776 899999999
Q ss_pred ccCCcCCCC-CCccccccCCCcEEEeecccccccCCCCcccccC--CcccccCCCC
Q 007668 151 ISSNSLSDY-IPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKF--SESSFFGNRG 203 (594)
Q Consensus 151 l~~N~l~~~-~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l--~~l~l~~N~~ 203 (594)
|++|+|++. +|..|.++++|++|+|++|+|++. ....+++| +.|++++|..
T Consensus 97 L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~--~~~~l~~L~L~~L~l~~n~l 150 (520)
T 2z7x_B 97 LSFNAFDALPICKEFGNMSQLKFLGLSTTHLEKS--SVLPIAHLNISKVLLVLGET 150 (520)
T ss_dssp CCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCGG--GGGGGTTSCEEEEEEEECTT
T ss_pred ccCCccccccchhhhccCCcceEEEecCcccchh--hccccccceeeEEEeecccc
Confidence 999999973 688999999999999999999873 34667788 9999999976
No 355
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.55 E-value=7.7e-15 Score=143.36 Aligned_cols=125 Identities=26% Similarity=0.291 Sum_probs=109.1
Q ss_pred CCcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhhCCCCCceEe
Q 007668 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLD 150 (594)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 150 (594)
.++|+.|+|++|+|+ .++ .+..+++|++|+|++|+|++..| +.++++|++|+|++|+|++ +|.. .. ++|+.|+
T Consensus 40 l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~-l~~~-~~-~~L~~L~ 112 (263)
T 1xeu_A 40 LSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKN-LNGI-PS-ACLSRLF 112 (263)
T ss_dssp HTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSC-CTTC-CC-SSCCEEE
T ss_pred cCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCC-cCcc-cc-CcccEEE
Confidence 468999999999999 555 78999999999999999995444 9999999999999999994 5553 33 9999999
Q ss_pred ccCCcCCCCCCccccccCCCcEEEeecccccccCCCCcccccCCcccccCCCCCC
Q 007668 151 ISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNRGLC 205 (594)
Q Consensus 151 l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~~c 205 (594)
|++|+|++ + ..+..+++|+.|+|++|+|++.+ ....+++|+.|++++|+...
T Consensus 113 L~~N~l~~-~-~~l~~l~~L~~L~Ls~N~i~~~~-~l~~l~~L~~L~L~~N~i~~ 164 (263)
T 1xeu_A 113 LDNNELRD-T-DSLIHLKNLEILSIRNNKLKSIV-MLGFLSKLEVLDLHGNEITN 164 (263)
T ss_dssp CCSSCCSB-S-GGGTTCTTCCEEECTTSCCCBCG-GGGGCTTCCEEECTTSCCCB
T ss_pred ccCCccCC-C-hhhcCcccccEEECCCCcCCCCh-HHccCCCCCEEECCCCcCcc
Confidence 99999997 4 36999999999999999999874 56789999999999998654
No 356
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.55 E-value=9.9e-15 Score=146.17 Aligned_cols=125 Identities=22% Similarity=0.315 Sum_probs=106.9
Q ss_pred CCcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhhCCCCCceEe
Q 007668 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLD 150 (594)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 150 (594)
.++|+.|+|++|.+++..+ +.++++|++|+|++|++++ +| .+..+++|++|+|++|++++ ++. +..+++|++|+
T Consensus 62 l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~ 135 (308)
T 1h6u_A 62 LNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLY 135 (308)
T ss_dssp CTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEE
T ss_pred cCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEE
Confidence 5789999999999995444 8999999999999999984 44 68899999999999999984 554 88999999999
Q ss_pred ccCCcCCCCCCccccccCCCcEEEeecccccccCCCCcccccCCcccccCCCCC
Q 007668 151 ISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNRGL 204 (594)
Q Consensus 151 l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~~ 204 (594)
|++|++++..+ +..+++|+.|+|++|++++.++ ...+++|+.|++++|...
T Consensus 136 l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~ 186 (308)
T 1h6u_A 136 LDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP-LANLSKLTTLKADDNKIS 186 (308)
T ss_dssp CCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCC
T ss_pred CCCCccCcCcc--ccCCCCccEEEccCCcCCCChh-hcCCCCCCEEECCCCccC
Confidence 99999997443 8899999999999999987665 678899999999999754
No 357
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.54 E-value=6.2e-15 Score=146.32 Aligned_cols=128 Identities=27% Similarity=0.348 Sum_probs=113.0
Q ss_pred CCCCcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhhCCCCCce
Q 007668 69 DKNKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLN 148 (594)
Q Consensus 69 ~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 148 (594)
...++|+.|+|++|.+++ ++ .+.++++|++|+|++|++++ + ..+..+++|+.|+|++|++++. ..+..+++|+.
T Consensus 87 ~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~ 160 (291)
T 1h6t_A 87 ANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDT 160 (291)
T ss_dssp TTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSE
T ss_pred ccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCC-C-hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCE
Confidence 356899999999999995 44 49999999999999999995 4 4789999999999999999954 57999999999
Q ss_pred EeccCCcCCCCCCccccccCCCcEEEeecccccccCCCCcccccCCcccccCCCCCC
Q 007668 149 LDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNRGLC 205 (594)
Q Consensus 149 L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~~c 205 (594)
|+|++|+|++..| +..+++|+.|+|++|+|++.+ ....+++|+.|++++|+..+
T Consensus 161 L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~l~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 161 LSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDLR-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp EECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBCG-GGTTCTTCSEEEEEEEEEEC
T ss_pred EEccCCccccchh--hcCCCccCEEECCCCcCCCCh-hhccCCCCCEEECcCCcccC
Confidence 9999999998554 999999999999999999764 46789999999999998654
No 358
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.54 E-value=4.5e-15 Score=134.57 Aligned_cols=113 Identities=26% Similarity=0.240 Sum_probs=101.5
Q ss_pred CCcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCC--hhhhCCCCCce
Q 007668 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIP--SELGNLSNLLN 148 (594)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p--~~~~~l~~L~~ 148 (594)
.++|+.|+|++|.|++. ..+..+++|++|+|++|++++.+|..+..+++|++|+|++|.|++ +| ..+..+++|+.
T Consensus 48 l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~l~~l~~L~~ 124 (168)
T 2ell_A 48 FVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKD-ISTLEPLKKLECLKS 124 (168)
T ss_dssp GGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEECBSSSCCS-SGGGGGGSSCSCCCE
T ss_pred CCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEeccCCccCc-chhHHHHhcCCCCCE
Confidence 47899999999999965 889999999999999999997788888889999999999999995 44 78999999999
Q ss_pred EeccCCcCCCCCC---ccccccCCCcEEEeecccccccCCC
Q 007668 149 LDISSNSLSDYIP---PSLGKLQRLITFNVSNNFLVGAIPS 186 (594)
Q Consensus 149 L~l~~N~l~~~~~---~~~~~l~~L~~l~l~~N~l~~~~~~ 186 (594)
|+|++|.+++..+ ..+..+++|+.|++++|.+...+..
T Consensus 125 L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~ 165 (168)
T 2ell_A 125 LDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQEAPDS 165 (168)
T ss_dssp EECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCBCCSS
T ss_pred EEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhhcccc
Confidence 9999999998544 4899999999999999999876654
No 359
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.54 E-value=2.4e-17 Score=154.00 Aligned_cols=129 Identities=26% Similarity=0.263 Sum_probs=94.3
Q ss_pred cEEEEEcccCCCCCCCCc------cccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhhCCCCC
Q 007668 73 RVITLSLTNHKLSGPISA------DLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNL 146 (594)
Q Consensus 73 ~l~~L~L~~n~l~~~~~~------~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 146 (594)
+++.++|+.+.++|..|. .+.++++|++|+|++|+|++ +| .+.++++|++|+|++|.|+ .+|..+..+++|
T Consensus 19 ~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L 95 (198)
T 1ds9_A 19 SVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTL 95 (198)
T ss_dssp CCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHC
T ss_pred cccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcC
Confidence 455556666666655555 77778888888888888874 66 7777888888888888887 677777777788
Q ss_pred ceEeccCCcCCCCCCccccccCCCcEEEeecccccccCC--CCcccccCCcccccCCCCCCC
Q 007668 147 LNLDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIP--SDGVLTKFSESSFFGNRGLCG 206 (594)
Q Consensus 147 ~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~--~~~~l~~l~~l~l~~N~~~c~ 206 (594)
+.|+|++|+|++ +| .+..+++|+.|+|++|++++.++ ....+++|+.|++++|++.|.
T Consensus 96 ~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~ 155 (198)
T 1ds9_A 96 EELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYND 155 (198)
T ss_dssp SEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHH
T ss_pred CEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccc
Confidence 888888888876 44 57777888888888888876543 346677788888888876554
No 360
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.54 E-value=9.9e-15 Score=148.85 Aligned_cols=109 Identities=21% Similarity=0.159 Sum_probs=98.8
Q ss_pred CeeecccC-ccCCCCCCCcCCCCccceeeccc-ccccCCCChhhhCCCCCceEeccCCcCCCCCCccccccCCCcEEEee
Q 007668 99 KFLNLHSN-NFYGEIPSELGNCTELQGLSLQS-NYLSGSIPSELGNLSNLLNLDISSNSLSDYIPPSLGKLQRLITFNVS 176 (594)
Q Consensus 99 ~~L~L~~N-~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~ 176 (594)
..+++++| +|+ .+|. |..+++|+.|+|++ |+|++..+..|.+|++|+.|+|++|+|+++.|..|.+|++|+.|+|+
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 35799998 899 6888 99999999999996 99998777899999999999999999999888999999999999999
Q ss_pred cccccccCCCCcccccCCcccccCCCCCCCCcc
Q 007668 177 NNFLVGAIPSDGVLTKFSESSFFGNRGLCGKQI 209 (594)
Q Consensus 177 ~N~l~~~~~~~~~l~~l~~l~l~~N~~~c~~~~ 209 (594)
+|+|+++++......+|+.|+|.+|++.|+|.+
T Consensus 89 ~N~l~~~~~~~~~~~~L~~l~l~~N~~~c~c~l 121 (347)
T 2ifg_A 89 FNALESLSWKTVQGLSLQELVLSGNPLHCSCAL 121 (347)
T ss_dssp SSCCSCCCSTTTCSCCCCEEECCSSCCCCCGGG
T ss_pred CCccceeCHHHcccCCceEEEeeCCCccCCCcc
Confidence 999999888764444499999999999999874
No 361
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.54 E-value=5e-15 Score=157.97 Aligned_cols=128 Identities=20% Similarity=0.114 Sum_probs=101.3
Q ss_pred CcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhh-CCCCCceEe
Q 007668 72 KRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELG-NLSNLLNLD 150 (594)
Q Consensus 72 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~ 150 (594)
++|+.|+|++|.|++..+. .+++|+.|+|++|.|++..|..|.++++|+.|+|++|.|++.+|..+. .+++|+.|+
T Consensus 99 ~~L~~L~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~ 175 (487)
T 3oja_A 99 PSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLN 175 (487)
T ss_dssp TTCCEEECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEE
T ss_pred CCcCEEECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEe
Confidence 4556666666666644433 357888889999998888788888889999999999999887887775 788999999
Q ss_pred ccCCcCCCCCCccccccCCCcEEEeecccccccCCCCcccccCCcccccCCCCC
Q 007668 151 ISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNRGL 204 (594)
Q Consensus 151 l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~~ 204 (594)
|++|.|++. |. +..+++|+.|+|++|.|++.++....+++|+.|++++|...
T Consensus 176 Ls~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~ 227 (487)
T 3oja_A 176 LQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLV 227 (487)
T ss_dssp CTTSCCCEE-EC-CCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCC
T ss_pred cCCCccccc-cc-cccCCCCCEEECCCCCCCCCCHhHcCCCCccEEEecCCcCc
Confidence 999998875 32 34588899999999999988887788888999999988743
No 362
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.53 E-value=1.8e-15 Score=168.99 Aligned_cols=132 Identities=28% Similarity=0.275 Sum_probs=115.9
Q ss_pred CCCcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhhCCCCCceE
Q 007668 70 KNKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNL 149 (594)
Q Consensus 70 ~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 149 (594)
...+|+.|+|++|.|. .+|..+.++++|++|+|++|.|+ .+|..|.+|++|++|+|++|.|+ .+|..|..|++|++|
T Consensus 222 ~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L 298 (727)
T 4b8c_D 222 DDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYF 298 (727)
T ss_dssp CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEE
T ss_pred cCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEE
Confidence 3578999999999999 78888889999999999999999 89999999999999999999999 889999999999999
Q ss_pred eccCCcCCCCCCccccccCCCcEEEeecccccccCCCCc-cc-ccCCcccccCCCCCC
Q 007668 150 DISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDG-VL-TKFSESSFFGNRGLC 205 (594)
Q Consensus 150 ~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~-~l-~~l~~l~l~~N~~~c 205 (594)
+|++|.|+. +|..|..|++|+.|+|++|+|++.+|... .+ ..+..+++.+|....
T Consensus 299 ~L~~N~l~~-lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~ 355 (727)
T 4b8c_D 299 YFFDNMVTT-LPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEI 355 (727)
T ss_dssp ECCSSCCCC-CCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_pred ECCCCCCCc-cChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccC
Confidence 999999985 78889999999999999999998877542 21 122346788887654
No 363
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.53 E-value=7e-15 Score=130.44 Aligned_cols=108 Identities=21% Similarity=0.186 Sum_probs=98.6
Q ss_pred CcccCCeeecccCccC-CCCCCCcCCCCccceeecccccccCCCChhhhCCCCCceEeccCCcCCCCCCccccccCCCcE
Q 007668 94 KLDQLKFLNLHSNNFY-GEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLDISSNSLSDYIPPSLGKLQRLIT 172 (594)
Q Consensus 94 ~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~ 172 (594)
..++|+.|+|++|.++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|+|++.+|..+..+++|+.
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 92 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTH 92 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCE
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCE
Confidence 4589999999999998 78999999999999999999999965 77999999999999999999888888888999999
Q ss_pred EEeecccccccC--CCCcccccCCcccccCCCC
Q 007668 173 FNVSNNFLVGAI--PSDGVLTKFSESSFFGNRG 203 (594)
Q Consensus 173 l~l~~N~l~~~~--~~~~~l~~l~~l~l~~N~~ 203 (594)
|++++|++++.+ .....+++|+.|++++|+.
T Consensus 93 L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l 125 (149)
T 2je0_A 93 LNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEV 125 (149)
T ss_dssp EECTTSCCCSHHHHGGGGGCTTCCEEECTTCGG
T ss_pred EECCCCcCCChHHHHHHhhCCCCCEEeCcCCcc
Confidence 999999999864 5568899999999999974
No 364
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.52 E-value=6e-15 Score=159.03 Aligned_cols=134 Identities=25% Similarity=0.301 Sum_probs=102.9
Q ss_pred CcCCCCCCCCCC-----cccee-EeCCCCcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccc
Q 007668 50 LNQWRPEDPDPC-----NWKGV-KCDKNKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQ 123 (594)
Q Consensus 50 l~~w~~~~~~~c-----~w~gv-~c~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 123 (594)
+.+|.. +.++| .|.|+ .|. .++|+.|+|++|+|++ +|..+ +++|++|+|++|+|+ .+| ..+++|+
T Consensus 33 l~~W~~-~~~~~~~~~~~~~~l~~C~-~~~L~~L~Ls~n~L~~-lp~~l--~~~L~~L~Ls~N~l~-~ip---~~l~~L~ 103 (571)
T 3cvr_A 33 WDKWEK-QALPGENRNEAVSLLKECL-INQFSELQLNRLNLSS-LPDNL--PPQITVLEITQNALI-SLP---ELPASLE 103 (571)
T ss_dssp HHHHHT-TCCTTCCHHHHHHHHHHHH-HTTCSEEECCSSCCSC-CCSCC--CTTCSEEECCSSCCS-CCC---CCCTTCC
T ss_pred HHHHhc-cCCccccccchhhhccccc-cCCccEEEeCCCCCCc-cCHhH--cCCCCEEECcCCCCc-ccc---cccCCCC
Confidence 455643 45678 69998 675 3578999999999986 66655 378999999999988 677 4578888
Q ss_pred eeecccccccCCCChhhhCCCCCceEeccCCcCCCCCCccccccCCCcEEEeecccccccCCCCcccccCCcccccCCCC
Q 007668 124 GLSLQSNYLSGSIPSELGNLSNLLNLDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNRG 203 (594)
Q Consensus 124 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~ 203 (594)
+|+|++|+|++ +|. +.+ +|++|+|++|+|++ +|. .+++|+.|+|++|+|++++. .+++|+.|++++|+.
T Consensus 104 ~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~lp~---~l~~L~~L~Ls~N~L 172 (571)
T 3cvr_A 104 YLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTMLPE---LPTSLEVLSVRNNQL 172 (571)
T ss_dssp EEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSCCCC---CCTTCCEEECCSSCC
T ss_pred EEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCcCCC---cCCCcCEEECCCCCC
Confidence 89999988885 776 654 88888888888887 555 57888888888888887544 567788888888864
No 365
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.52 E-value=2.4e-14 Score=156.00 Aligned_cols=124 Identities=28% Similarity=0.354 Sum_probs=93.2
Q ss_pred CCcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhhCCCCCceEe
Q 007668 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLD 150 (594)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 150 (594)
.++|+.|+|++|+|++..+ +..+++|+.|+|++|.|++ +| .+..+++|+.|+|++|.|++ ++ .+..+++|+.|+
T Consensus 64 l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~ 137 (605)
T 1m9s_A 64 LPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISD-IN-GLVHLPQLESLY 137 (605)
T ss_dssp CTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-CG-GGGGCTTCSEEE
T ss_pred CCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-Cc-cccCCCccCEEE
Confidence 4678888888888885544 7788888888888888873 44 67778888888888888874 33 477778888888
Q ss_pred ccCCcCCCCCCccccccCCCcEEEeecccccccCCCCcccccCCcccccCCCC
Q 007668 151 ISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNRG 203 (594)
Q Consensus 151 l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~ 203 (594)
|++|+|+++ ..+..+++|+.|+|++|+|++.++ ...+++|+.|+|++|+.
T Consensus 138 Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~i 187 (605)
T 1m9s_A 138 LGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKNHI 187 (605)
T ss_dssp CCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSSCC
T ss_pred CCCCccCCc--hhhcccCCCCEEECcCCcCCCchh-hccCCCCCEEECcCCCC
Confidence 888888764 567777888888888888877666 66677777888877764
No 366
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.51 E-value=1.4e-14 Score=147.60 Aligned_cols=128 Identities=21% Similarity=0.233 Sum_probs=73.0
Q ss_pred CCcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhhCCCCCceEe
Q 007668 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLD 150 (594)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 150 (594)
.++|+.|++++|.+++..+ +..+++|++|+|++|++++. +. +..+++|++|+|++|.+++ + ..+..+++|++|+
T Consensus 198 l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~ 271 (347)
T 4fmz_A 198 LTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDL-SP-LANLSQLTWLEIGTNQISD-I-NAVKDLTKLKMLN 271 (347)
T ss_dssp CTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCCEEE
T ss_pred CCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCC-cc-hhcCCCCCEEECCCCccCC-C-hhHhcCCCcCEEE
Confidence 3456666666666664333 55666666666666666632 22 5566666666666666653 2 2455666666666
Q ss_pred ccCCcCCCCCCccccccCCCcEEEeecccccccCCCC-cccccCCcccccCCCCCCC
Q 007668 151 ISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSD-GVLTKFSESSFFGNRGLCG 206 (594)
Q Consensus 151 l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~l~~l~~l~l~~N~~~c~ 206 (594)
+++|++++. ..+..+++|+.|+|++|++++..+.. ..+++|+.|++++|+...-
T Consensus 272 l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~ 326 (347)
T 4fmz_A 272 VGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDI 326 (347)
T ss_dssp CCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCC
T ss_pred ccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccc
Confidence 666666652 34556666666666666665554432 4556666666666654433
No 367
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.50 E-value=1.1e-14 Score=146.54 Aligned_cols=128 Identities=20% Similarity=0.114 Sum_probs=98.4
Q ss_pred CcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhh-hCCCCCceEe
Q 007668 72 KRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSEL-GNLSNLLNLD 150 (594)
Q Consensus 72 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~ 150 (594)
++|+.|+|++|+|++..+. .+++|++|+|++|++++..|..+..+++|++|+|++|.+++..+..+ ..+++|++|+
T Consensus 99 ~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~ 175 (317)
T 3o53_A 99 PSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLN 175 (317)
T ss_dssp TTCCEEECCSSCCSEEEEC---CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEE
T ss_pred CCcCEEECCCCccCCcCcc---ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEE
Confidence 4556666666666643332 35778888888888887777788888899999999998887666666 4788899999
Q ss_pred ccCCcCCCCCCccccccCCCcEEEeecccccccCCCCcccccCCcccccCCCCC
Q 007668 151 ISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNRGL 204 (594)
Q Consensus 151 l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~~ 204 (594)
|++|+|++. +. ...+++|+.|+|++|+|++.++....+++|+.|++++|+..
T Consensus 176 L~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~L~~N~l~ 227 (317)
T 3o53_A 176 LQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLV 227 (317)
T ss_dssp CTTSCCCEE-EC-CCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCC
T ss_pred CCCCcCccc-cc-ccccccCCEEECCCCcCCcchhhhcccCcccEEECcCCccc
Confidence 999998874 32 33588899999999999888777778888999999988754
No 368
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.49 E-value=3.2e-14 Score=154.96 Aligned_cols=126 Identities=27% Similarity=0.361 Sum_probs=112.8
Q ss_pred CCCcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhhCCCCCceE
Q 007668 70 KNKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNL 149 (594)
Q Consensus 70 ~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 149 (594)
..++|+.|+|++|.|++ ++ .+..+++|+.|+|++|+|++ ++ .+..|++|+.|+|++|.|++. ..+..+++|+.|
T Consensus 85 ~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L 158 (605)
T 1m9s_A 85 NLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISD-IN-GLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTL 158 (605)
T ss_dssp GCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-CG-GGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEE
T ss_pred cCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-Cc-cccCCCccCEEECCCCccCCc--hhhcccCCCCEE
Confidence 46789999999999995 44 79999999999999999995 44 699999999999999999954 679999999999
Q ss_pred eccCCcCCCCCCccccccCCCcEEEeecccccccCCCCcccccCCcccccCCCCC
Q 007668 150 DISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNRGL 204 (594)
Q Consensus 150 ~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~~ 204 (594)
+|++|+|++..| +..+++|+.|+|++|+|++. +....+++|+.|+|++|+..
T Consensus 159 ~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l-~~l~~l~~L~~L~L~~N~l~ 210 (605)
T 1m9s_A 159 SLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL-RALAGLKNLDVLELFSQECL 210 (605)
T ss_dssp ECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC-GGGTTCTTCSEEECCSEEEE
T ss_pred ECcCCcCCCchh--hccCCCCCEEECcCCCCCCC-hHHccCCCCCEEEccCCcCc
Confidence 999999998666 99999999999999999986 55688999999999999854
No 369
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.47 E-value=5.2e-16 Score=144.94 Aligned_cols=125 Identities=22% Similarity=0.274 Sum_probs=109.4
Q ss_pred CCcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhhCCCCCceEe
Q 007668 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLD 150 (594)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 150 (594)
.++|++|+|++|.|++ +| .+.++++|++|+|++|+|+ .+|..+..+++|++|+|++|+|++ +| .+..+++|++|+
T Consensus 47 l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~ 121 (198)
T 1ds9_A 47 LKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLY 121 (198)
T ss_dssp TTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEE
T ss_pred CCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEE
Confidence 5789999999999996 67 8999999999999999999 788888888999999999999995 66 689999999999
Q ss_pred ccCCcCCCCCC-ccccccCCCcEEEeecccccccCCC-----------CcccccCCcccccCCC
Q 007668 151 ISSNSLSDYIP-PSLGKLQRLITFNVSNNFLVGAIPS-----------DGVLTKFSESSFFGNR 202 (594)
Q Consensus 151 l~~N~l~~~~~-~~~~~l~~L~~l~l~~N~l~~~~~~-----------~~~l~~l~~l~l~~N~ 202 (594)
|++|+|++..+ ..+..+++|+.|++++|++++.+|. ...+++|+.|+ +|+
T Consensus 122 l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~ 183 (198)
T 1ds9_A 122 MSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMP 183 (198)
T ss_dssp ESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGG
T ss_pred CCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhCCCcEEEC--Ccc
Confidence 99999997332 4789999999999999999888665 46778888775 554
No 370
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.46 E-value=5.7e-14 Score=143.35 Aligned_cols=143 Identities=16% Similarity=0.115 Sum_probs=107.6
Q ss_pred CccceeEeCC----------CCcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCC-CCcCCCCccce-eecc
Q 007668 61 CNWKGVKCDK----------NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIP-SELGNCTELQG-LSLQ 128 (594)
Q Consensus 61 c~w~gv~c~~----------~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~-L~Ls 128 (594)
|+|..|.|+. ++++++|+|++|+|+.+.+..|.++++|++|+|++|++.+.+| ..|.++++|++ +.++
T Consensus 9 C~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 9 CSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp EETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred eeCCEEEecCCCCCccCcCcCCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 6788888853 2578889999999985555678889999999999998866565 46788888765 6667
Q ss_pred cccccCCCChhhhCCCCCceEeccCCcCCCCCCccccccCCCcEEEeec-ccccccCCCC-ccc-ccCCcccccCCCC
Q 007668 129 SNYLSGSIPSELGNLSNLLNLDISSNSLSDYIPPSLGKLQRLITFNVSN-NFLVGAIPSD-GVL-TKFSESSFFGNRG 203 (594)
Q Consensus 129 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~-N~l~~~~~~~-~~l-~~l~~l~l~~N~~ 203 (594)
+|+|+...|..|..+++|++|++++|+|+...+..+....++..|++.+ |++..+++.. ..+ ..++.|++++|..
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i 166 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGI 166 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCC
T ss_pred CCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccc
Confidence 7888877778888899999999999999876666677777777888765 5666655543 333 3567778887763
No 371
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.45 E-value=8e-14 Score=148.08 Aligned_cols=125 Identities=30% Similarity=0.306 Sum_probs=83.9
Q ss_pred CCcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhhCCCCCceEe
Q 007668 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLD 150 (594)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 150 (594)
.++|+.|+|++|.+++..+ +..+++|+.|+|++|.+++..+ +..+++|+.|+|++|++++..| +..+++|+.|+
T Consensus 242 l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~ 315 (466)
T 1o6v_A 242 LTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLT 315 (466)
T ss_dssp CTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEE
T ss_pred CCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEE
Confidence 4567777777777775444 6777777777777777774333 6677777777777777774333 66677777777
Q ss_pred ccCCcCCCCCCccccccCCCcEEEeecccccccCCCCcccccCCcccccCCCCC
Q 007668 151 ISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNRGL 204 (594)
Q Consensus 151 l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~~ 204 (594)
|++|++++..| +..+++|+.|++++|++++. +....+++|+.|++++|+..
T Consensus 316 L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~l~~n~l~ 366 (466)
T 1o6v_A 316 LYFNNISDISP--VSSLTKLQRLFFYNNKVSDV-SSLANLTNINWLSAGHNQIS 366 (466)
T ss_dssp CCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC-GGGTTCTTCCEEECCSSCCC
T ss_pred CcCCcCCCchh--hccCccCCEeECCCCccCCc-hhhccCCCCCEEeCCCCccC
Confidence 77777776444 56667777777777777655 34456666777777766654
No 372
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.44 E-value=6e-14 Score=128.18 Aligned_cols=111 Identities=17% Similarity=0.121 Sum_probs=95.5
Q ss_pred ccccCcccCCeeecccCccCCCCCCCcCCCC-ccceeecccccccCCCChhhhCCCCCceEeccCCcCCCCCCccccccC
Q 007668 90 ADLGKLDQLKFLNLHSNNFYGEIPSELGNCT-ELQGLSLQSNYLSGSIPSELGNLSNLLNLDISSNSLSDYIPPSLGKLQ 168 (594)
Q Consensus 90 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~ 168 (594)
..+.++++|+.|+|++|+++ .+|. +..+. +|++|+|++|.|++. ..|..+++|++|+|++|+|+++.+..+..++
T Consensus 13 ~~~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 88 (176)
T 1a9n_A 13 AQYTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALP 88 (176)
T ss_dssp CEEECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCT
T ss_pred HhcCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCC
Confidence 35678899999999999999 5664 55555 999999999999954 6799999999999999999985556669999
Q ss_pred CCcEEEeecccccccCC--CCcccccCCcccccCCCCC
Q 007668 169 RLITFNVSNNFLVGAIP--SDGVLTKFSESSFFGNRGL 204 (594)
Q Consensus 169 ~L~~l~l~~N~l~~~~~--~~~~l~~l~~l~l~~N~~~ 204 (594)
+|+.|+|++|+|+..++ ....+++|+.|++++|+..
T Consensus 89 ~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~l~~N~i~ 126 (176)
T 1a9n_A 89 DLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVT 126 (176)
T ss_dssp TCCEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGG
T ss_pred CCCEEECCCCcCCcchhhHhhhcCCCCCEEEecCCCCC
Confidence 99999999999987665 4578999999999999854
No 373
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.43 E-value=3.6e-13 Score=142.31 Aligned_cols=119 Identities=24% Similarity=0.258 Sum_probs=80.2
Q ss_pred CCcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhhCCCCCceEe
Q 007668 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLD 150 (594)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 150 (594)
.++|++|+|++|.|++. | .+..+++|++|+|++|+|++ +| ++.+++|++|+|++|.|++ +| +..+++|++|+
T Consensus 41 l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~-~~--~~~l~~L~~L~ 112 (457)
T 3bz5_A 41 LATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTN-LD--VTPLTKLTYLN 112 (457)
T ss_dssp HTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSC-CC--CTTCTTCCEEE
T ss_pred cCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCce-ee--cCCCCcCCEEE
Confidence 35677777777777743 4 56777777777777777774 33 6677777777777777774 33 66777777777
Q ss_pred ccCCcCCCCCCccccccCCCcEEEeecccccccCCCCcccccCCcccccCCC
Q 007668 151 ISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNR 202 (594)
Q Consensus 151 l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~l~~N~ 202 (594)
|++|+|++ +| +..+++|+.|++++|+|++. ....+++|+.|++++|+
T Consensus 113 L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l--~l~~l~~L~~L~l~~n~ 159 (457)
T 3bz5_A 113 CDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI--DVSHNTQLTELDCHLNK 159 (457)
T ss_dssp CCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC--CCTTCTTCCEEECTTCS
T ss_pred CCCCcCCe-ec--CCCCCcCCEEECCCCcccee--ccccCCcCCEEECCCCC
Confidence 77777776 33 66777777777777777764 24556666677776664
No 374
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.42 E-value=2.2e-13 Score=146.88 Aligned_cols=121 Identities=22% Similarity=0.232 Sum_probs=76.2
Q ss_pred ceeEeCCCCcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhhCC
Q 007668 64 KGVKCDKNKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNL 143 (594)
Q Consensus 64 ~gv~c~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 143 (594)
..+. ...++|+.|+|++|+|++ +|. +.+ +|++|+|++|+|++ +|. .+++|+.|+|++|.|++ +|. .+
T Consensus 93 ~~ip-~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l 159 (571)
T 3cvr_A 93 ISLP-ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LP 159 (571)
T ss_dssp SCCC-CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CC
T ss_pred cccc-cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cC
Confidence 3444 345778888888888885 665 554 77788888877774 554 56777777777777773 554 45
Q ss_pred CCCceEeccCCcCCCCCCccccccCCCcEEEeecccccccCCCCcccccC-------CcccccCCCCC
Q 007668 144 SNLLNLDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKF-------SESSFFGNRGL 204 (594)
Q Consensus 144 ~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l-------~~l~l~~N~~~ 204 (594)
++|+.|+|++|+|++ +|. |. ++|+.|+|++|+|+.++. ... +| +.|++++|+..
T Consensus 160 ~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~ 220 (571)
T 3cvr_A 160 TSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLESLPA-VPV--RNHHSEETEIFFRCRENRIT 220 (571)
T ss_dssp TTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCSSCCC-CC----------CCEEEECCSSCCC
T ss_pred CCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCCchhh-HHH--hhhcccccceEEecCCCcce
Confidence 667777777777766 454 44 666666666666664444 221 44 56666666543
No 375
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.42 E-value=2.6e-13 Score=144.20 Aligned_cols=126 Identities=29% Similarity=0.374 Sum_probs=106.5
Q ss_pred CCcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhhCCCCCceEe
Q 007668 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLD 150 (594)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 150 (594)
.++|+.|+|++|.+++. +.+..+++|+.|+|++|.+++..| +..+++|++|+|++|.+++. +. +..+++|+.|+
T Consensus 220 l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L~ 293 (466)
T 1o6v_A 220 LTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNI-SP-LAGLTALTNLE 293 (466)
T ss_dssp CTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCC-GG-GTTCTTCSEEE
T ss_pred cCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcc-cc-ccCCCccCeEE
Confidence 46899999999999853 468889999999999999986554 88899999999999999954 44 88899999999
Q ss_pred ccCCcCCCCCCccccccCCCcEEEeecccccccCCCCcccccCCcccccCCCCCC
Q 007668 151 ISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNRGLC 205 (594)
Q Consensus 151 l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~~c 205 (594)
|++|++++..+ +..+++|+.|+|++|++++.++ ...+++|+.|++++|+...
T Consensus 294 L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~ 345 (466)
T 1o6v_A 294 LNENQLEDISP--ISNLKNLTYLTLYFNNISDISP-VSSLTKLQRLFFYNNKVSD 345 (466)
T ss_dssp CCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG-GGGCTTCCEEECCSSCCCC
T ss_pred cCCCcccCchh--hcCCCCCCEEECcCCcCCCchh-hccCccCCEeECCCCccCC
Confidence 99999998544 7889999999999999998776 5788999999999997554
No 376
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.41 E-value=2.9e-13 Score=137.83 Aligned_cols=124 Identities=24% Similarity=0.340 Sum_probs=86.2
Q ss_pred CCcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhhCCCCCceEe
Q 007668 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLD 150 (594)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 150 (594)
.++|+.|++++|.+++..+ +..+++|+.|++++|.+++..+ +..+++|++|+|++|.+++ ++. +..+++|++|+
T Consensus 176 l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~ 249 (347)
T 4fmz_A 176 LTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITD-LSP-LANLSQLTWLE 249 (347)
T ss_dssp CTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEE
T ss_pred CCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCC-Ccc-hhcCCCCCEEE
Confidence 4567777777777774332 6777777777777777774433 6777777777777777773 333 67777777777
Q ss_pred ccCCcCCCCCCccccccCCCcEEEeecccccccCCCCcccccCCcccccCCCC
Q 007668 151 ISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNRG 203 (594)
Q Consensus 151 l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~ 203 (594)
|++|.+++. ..+..+++|+.|++++|++++. +....+++|+.|++++|+.
T Consensus 250 l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~L~~n~l 299 (347)
T 4fmz_A 250 IGTNQISDI--NAVKDLTKLKMLNVGSNQISDI-SVLNNLSQLNSLFLNNNQL 299 (347)
T ss_dssp CCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCC
T ss_pred CCCCccCCC--hhHhcCCCcCEEEccCCccCCC-hhhcCCCCCCEEECcCCcC
Confidence 777777763 4567777777777777777765 3446677777777777764
No 377
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.39 E-value=4.2e-13 Score=145.22 Aligned_cols=103 Identities=22% Similarity=0.256 Sum_probs=94.6
Q ss_pred cCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhhCCCCCceEeccCCcCCCCCCccccccCCCcEEEee
Q 007668 97 QLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLDISSNSLSDYIPPSLGKLQRLITFNVS 176 (594)
Q Consensus 97 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~ 176 (594)
.|+.|+|++|+|++ +|. |+.+++|+.|+|++|+|+ .+|..|+.+++|+.|+|++|+|++ +| .+..+++|+.|+|+
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLC 516 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECC
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECC
Confidence 47789999999994 776 999999999999999999 899999999999999999999998 67 89999999999999
Q ss_pred cccccccC--CCCcccccCCcccccCCCCC
Q 007668 177 NNFLVGAI--PSDGVLTKFSESSFFGNRGL 204 (594)
Q Consensus 177 ~N~l~~~~--~~~~~l~~l~~l~l~~N~~~ 204 (594)
+|+|++.+ .....+++|+.|++++|+..
T Consensus 517 ~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~ 546 (567)
T 1dce_A 517 NNRLQQSAAIQPLVSCPRLVLLNLQGNSLC 546 (567)
T ss_dssp SSCCCSSSTTGGGGGCTTCCEEECTTSGGG
T ss_pred CCCCCCCCCcHHHhcCCCCCEEEecCCcCC
Confidence 99999994 45589999999999999853
No 378
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.39 E-value=1.1e-13 Score=151.08 Aligned_cols=136 Identities=24% Similarity=0.274 Sum_probs=91.8
Q ss_pred CCcCCCCCCCCCCccceeEeC-------CCCcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCc
Q 007668 49 FLNQWRPEDPDPCNWKGVKCD-------KNKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTE 121 (594)
Q Consensus 49 ~l~~w~~~~~~~c~w~gv~c~-------~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 121 (594)
..+.|. ...+||.|+|..|. ...+++.|++++|+|+ .+|..+. ++|++|+|++|+|+ .+|. .+++
T Consensus 11 ~w~~W~-~~~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~ 82 (622)
T 3g06_A 11 VWSAWR-RAAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPE 82 (622)
T ss_dssp HHHHHH-HTCCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTT
T ss_pred HHHHHH-hcCCcchhccccccCcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCC
Confidence 345564 34578888664321 1235788888888888 6676664 68888888888887 5664 4677
Q ss_pred cceeecccccccCCCChhhhCCCCCceEeccCCcCCCCCCccccccCCCcEEEeecccccccCCCCcccccCCcccccCC
Q 007668 122 LQGLSLQSNYLSGSIPSELGNLSNLLNLDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGN 201 (594)
Q Consensus 122 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~l~~N 201 (594)
|++|+|++|+|+ .+|. .+++|++|+|++|+|++ +|. .+++|+.|+|++|+|++++.. +++|+.|++++|
T Consensus 83 L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~lp~~---l~~L~~L~Ls~N 151 (622)
T 3g06_A 83 LRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTSLPVL---PPGLQELSVSDN 151 (622)
T ss_dssp CCEEEECSCCCS-CCCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSCCCCC---CTTCCEEECCSS
T ss_pred CCEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCcCCCC---CCCCCEEECcCC
Confidence 888888888887 5665 56777888888887776 444 456677777777777665442 366667777666
Q ss_pred CC
Q 007668 202 RG 203 (594)
Q Consensus 202 ~~ 203 (594)
+.
T Consensus 152 ~l 153 (622)
T 3g06_A 152 QL 153 (622)
T ss_dssp CC
T ss_pred cC
Confidence 53
No 379
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.37 E-value=1.6e-12 Score=137.27 Aligned_cols=130 Identities=16% Similarity=0.186 Sum_probs=90.0
Q ss_pred CccceeEeCCCCcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhh
Q 007668 61 CNWKGVKCDKNKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSEL 140 (594)
Q Consensus 61 c~w~gv~c~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 140 (594)
|...++.....++|++|+|++|+|++ ++ ++++++|++|+|++|+|++ ++ ++.+++|++|++++|...+.+ .+
T Consensus 95 N~l~~~~~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~-l~--l~~l~~L~~L~l~~n~~~~~~--~~ 166 (457)
T 3bz5_A 95 NKLTNLDVTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTE-ID--VSHNTQLTELDCHLNKKITKL--DV 166 (457)
T ss_dssp SCCSCCCCTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSC-CC--CTTCTTCCEEECTTCSCCCCC--CC
T ss_pred CCCceeecCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCccce-ec--cccCCcCCEEECCCCCccccc--cc
Confidence 34455545556789999999999986 44 8888999999999999885 33 677777777777777544454 36
Q ss_pred hCCCCCceEeccCCcCCCCCCccccccCCCcEEEeecccccccCCCCcccccCCcccccCCCC
Q 007668 141 GNLSNLLNLDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNRG 203 (594)
Q Consensus 141 ~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~ 203 (594)
..+++|+.|+|++|+|++ +| +..+++|+.|++++|++++. ....+++|+.|++++|+.
T Consensus 167 ~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~--~l~~l~~L~~L~Ls~N~l 224 (457)
T 3bz5_A 167 TPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL--DLNQNIQLTFLDCSSNKL 224 (457)
T ss_dssp TTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC--CCTTCTTCSEEECCSSCC
T ss_pred ccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee--ccccCCCCCEEECcCCcc
Confidence 666777777777777776 34 56666666666666666655 245566666666666653
No 380
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.34 E-value=3.8e-14 Score=146.76 Aligned_cols=133 Identities=19% Similarity=0.206 Sum_probs=88.4
Q ss_pred CcEEEEEcccCCCC-CCCC---ccccCcccCCeeecccCccC--C---CCCCCcCCCCccceeeccccccc----CCCCh
Q 007668 72 KRVITLSLTNHKLS-GPIS---ADLGKLDQLKFLNLHSNNFY--G---EIPSELGNCTELQGLSLQSNYLS----GSIPS 138 (594)
Q Consensus 72 ~~l~~L~L~~n~l~-~~~~---~~~~~l~~L~~L~L~~N~l~--~---~~p~~~~~l~~L~~L~Ls~N~l~----~~~p~ 138 (594)
++|++|+|++|+|+ +.++ ..+..+++|++|+|++|+|+ | ..|..+..+++|+.|+|++|.|+ +.+|.
T Consensus 159 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~ 238 (386)
T 2ca6_A 159 PPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAI 238 (386)
T ss_dssp CCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHH
T ss_pred CCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHH
Confidence 56777777777776 3333 35556677777777777776 2 34446677777777777777774 45677
Q ss_pred hhhCCCCCceEeccCCcCCCC----CCcccc--ccCCCcEEEeecccccc-----cCCCC-cccccCCcccccCCCCC
Q 007668 139 ELGNLSNLLNLDISSNSLSDY----IPPSLG--KLQRLITFNVSNNFLVG-----AIPSD-GVLTKFSESSFFGNRGL 204 (594)
Q Consensus 139 ~~~~l~~L~~L~l~~N~l~~~----~~~~~~--~l~~L~~l~l~~N~l~~-----~~~~~-~~l~~l~~l~l~~N~~~ 204 (594)
.+..+++|++|+|++|.|++. ++..+. .+++|+.|+|++|+|++ .+... ..+++|+.|++++|+..
T Consensus 239 ~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~ 316 (386)
T 2ca6_A 239 ALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFS 316 (386)
T ss_dssp HGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSC
T ss_pred HHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCC
Confidence 777777777777777777654 344553 37777777777777776 33333 34677777777777644
No 381
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.34 E-value=3e-14 Score=144.51 Aligned_cols=130 Identities=22% Similarity=0.287 Sum_probs=84.9
Q ss_pred CcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCC-CCCCcCCCCccceeecccccccCCCChhhhCCCCCceEe
Q 007668 72 KRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGE-IPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLD 150 (594)
Q Consensus 72 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 150 (594)
.+++.|++++|.+++..+. +.++++|++|+|++|.+++. +|..+..+++|++|+|++|.+++..|..+..+++|++|+
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 5667777777777755444 44677777777777776644 566666777777777777777666666677777777777
Q ss_pred ccCC-cCCCC-CCccccccCCCcEEEeecc-ccccc--CCCCcccc-cCCcccccCCC
Q 007668 151 ISSN-SLSDY-IPPSLGKLQRLITFNVSNN-FLVGA--IPSDGVLT-KFSESSFFGNR 202 (594)
Q Consensus 151 l~~N-~l~~~-~~~~~~~l~~L~~l~l~~N-~l~~~--~~~~~~l~-~l~~l~l~~N~ 202 (594)
|++| .+++. ++..+..+++|+.|+|++| .+++. +.....++ +|+.|++++|.
T Consensus 149 L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~ 206 (336)
T 2ast_B 149 LSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYR 206 (336)
T ss_dssp CTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCG
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCc
Confidence 7777 56542 4555666777777777777 66642 22235566 77777777664
No 382
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.34 E-value=2.5e-12 Score=140.31 Aligned_cols=56 Identities=27% Similarity=0.215 Sum_probs=26.5
Q ss_pred CCCceEeccCCcCCCCCCccccccCCCcEEEeecccccccCCCCcccccCCcccccCCCC
Q 007668 144 SNLLNLDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNRG 203 (594)
Q Consensus 144 ~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~ 203 (594)
++|+.|+|++|+|++ +|. .+++|+.|+|++|+|+.+++....+++|+.|++++|++
T Consensus 241 ~~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~~lp~~l~~l~~L~~L~L~~N~l 296 (622)
T 3g06_A 241 SELKELMVSGNRLTS-LPM---LPSGLLSLSVYRNQLTRLPESLIHLSSETTVNLEGNPL 296 (622)
T ss_dssp TTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCCSCCGGGGGSCTTCEEECCSCCC
T ss_pred CcCcEEECCCCCCCc-CCc---ccccCcEEeCCCCCCCcCCHHHhhccccCEEEecCCCC
Confidence 444444444444443 332 33445555555555554433334455555555555554
No 383
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.33 E-value=3.7e-12 Score=134.43 Aligned_cols=117 Identities=22% Similarity=0.251 Sum_probs=70.7
Q ss_pred CcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhhCCCCCceEec
Q 007668 72 KRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLDI 151 (594)
Q Consensus 72 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 151 (594)
++|+.|+|++|++++ ++.. .++|++|+|++|++++ +| .|+++++|++|++++|++++ +|..+ ++|++|+|
T Consensus 111 ~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L 180 (454)
T 1jl5_A 111 QSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAA 180 (454)
T ss_dssp TTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEEC
T ss_pred CCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEEC
Confidence 455556666665553 2211 1567777777777774 55 47777777777777777763 55432 46677777
Q ss_pred cCCcCCCCCCccccccCCCcEEEeecccccccCCCCcccccCCcccccCCCC
Q 007668 152 SSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNRG 203 (594)
Q Consensus 152 ~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~ 203 (594)
++|++++ +| .+.++++|+.|++++|++++.+.. .++|+.|++++|..
T Consensus 181 ~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~l~~~---~~~L~~L~l~~n~l 227 (454)
T 1jl5_A 181 GNNQLEE-LP-ELQNLPFLTAIYADNNSLKKLPDL---PLSLESIVAGNNIL 227 (454)
T ss_dssp CSSCCSS-CC-CCTTCTTCCEEECCSSCCSSCCCC---CTTCCEEECCSSCC
T ss_pred cCCcCCc-Cc-cccCCCCCCEEECCCCcCCcCCCC---cCcccEEECcCCcC
Confidence 7777766 44 466667777777777766654322 24566666666643
No 384
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.29 E-value=8.1e-13 Score=139.47 Aligned_cols=125 Identities=20% Similarity=0.131 Sum_probs=54.8
Q ss_pred CcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCcc-------------ceeecccccccCCCCh
Q 007668 72 KRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTEL-------------QGLSLQSNYLSGSIPS 138 (594)
Q Consensus 72 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L-------------~~L~Ls~N~l~~~~p~ 138 (594)
++|++|++++|++ |.+|..++++++|++|+|++|.++|.+|..++++++| ++|++++|.+++ +|.
T Consensus 11 ~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-lp~ 88 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-LPE 88 (454)
T ss_dssp ------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-CCS
T ss_pred ccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-CCC
Confidence 5677777777777 4677777777777777777777776777766666543 555555555552 332
Q ss_pred hhhCCCCCceEeccCCcCCCCCCcccc----------------cc-CCCcEEEeecccccccCCCCcccccCCcccccCC
Q 007668 139 ELGNLSNLLNLDISSNSLSDYIPPSLG----------------KL-QRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGN 201 (594)
Q Consensus 139 ~~~~l~~L~~L~l~~N~l~~~~~~~~~----------------~l-~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~l~~N 201 (594)
. .++|++|+|++|++++ +|..+. .+ ++|++|++++|++++. |....+++|+.|++++|
T Consensus 89 ~---~~~L~~L~l~~n~l~~-lp~~~~~L~~L~l~~n~l~~l~~~~~~L~~L~L~~n~l~~l-p~~~~l~~L~~L~l~~N 163 (454)
T 1jl5_A 89 L---PPHLESLVASCNSLTE-LPELPQSLKSLLVDNNNLKALSDLPPLLEYLGVSNNQLEKL-PELQNSSFLKIIDVDNN 163 (454)
T ss_dssp C---CTTCSEEECCSSCCSS-CCCCCTTCCEEECCSSCCSCCCSCCTTCCEEECCSSCCSSC-CCCTTCTTCCEEECCSS
T ss_pred C---cCCCCEEEccCCcCCc-cccccCCCcEEECCCCccCcccCCCCCCCEEECcCCCCCCC-cccCCCCCCCEEECCCC
Confidence 1 1334444444444443 222110 11 4566666666666653 34556666666666666
Q ss_pred CC
Q 007668 202 RG 203 (594)
Q Consensus 202 ~~ 203 (594)
+.
T Consensus 164 ~l 165 (454)
T 1jl5_A 164 SL 165 (454)
T ss_dssp CC
T ss_pred cC
Confidence 53
No 385
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.29 E-value=1.4e-13 Score=141.04 Aligned_cols=132 Identities=20% Similarity=0.216 Sum_probs=82.9
Q ss_pred CcEEEEEcccCCCCCCCC----ccccCcc-cCCeeecccCccCCCCCCCcCCC-----CccceeecccccccCCCChhhh
Q 007668 72 KRVITLSLTNHKLSGPIS----ADLGKLD-QLKFLNLHSNNFYGEIPSELGNC-----TELQGLSLQSNYLSGSIPSELG 141 (594)
Q Consensus 72 ~~l~~L~L~~n~l~~~~~----~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~~p~~~~ 141 (594)
++|++|+|++|.|++..+ ..|.+++ +|++|+|++|+|++..+..|..+ ++|++|+|++|.|++..+..+.
T Consensus 22 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~ 101 (362)
T 3goz_A 22 HGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELV 101 (362)
T ss_dssp TTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHH
T ss_pred CCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHH
Confidence 457777777777775544 5666666 77777777777776555555554 7777777777777755555433
Q ss_pred ----CC-CCCceEeccCCcCCCCCCccccc-----cCCCcEEEeecccccccCCCC-----cccc-cCCcccccCCCC
Q 007668 142 ----NL-SNLLNLDISSNSLSDYIPPSLGK-----LQRLITFNVSNNFLVGAIPSD-----GVLT-KFSESSFFGNRG 203 (594)
Q Consensus 142 ----~l-~~L~~L~l~~N~l~~~~~~~~~~-----l~~L~~l~l~~N~l~~~~~~~-----~~l~-~l~~l~l~~N~~ 203 (594)
.+ ++|++|+|++|+|++..+..+.. .++|++|+|++|+|+...... ..++ +|+.|++++|+.
T Consensus 102 ~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l 179 (362)
T 3goz_A 102 KTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNL 179 (362)
T ss_dssp HHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCG
T ss_pred HHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCC
Confidence 33 67777777777777644444332 247777777777776432211 1222 677777777753
No 386
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.29 E-value=4.1e-12 Score=129.48 Aligned_cols=125 Identities=15% Similarity=0.059 Sum_probs=104.6
Q ss_pred EEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCC-hhhhCCCCCce-Eecc
Q 007668 75 ITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIP-SELGNLSNLLN-LDIS 152 (594)
Q Consensus 75 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~-L~l~ 152 (594)
++++.++++|+ .+|..+ .++|++|+|++|+|+...+..|.++++|++|+|++|++.+.+| ..|.++++|++ ++++
T Consensus 12 ~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 35789999999 788766 4689999999999995555679999999999999999976666 46889999875 6778
Q ss_pred CCcCCCCCCccccccCCCcEEEeecccccccCCCC-cccccCCcccccCCC
Q 007668 153 SNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSD-GVLTKFSESSFFGNR 202 (594)
Q Consensus 153 ~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~l~~l~~l~l~~N~ 202 (594)
+|+|+.+.|..|..+++|++|++++|+|+..++.. ....++..+++.+|.
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~ 139 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNI 139 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCT
T ss_pred CCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhcccc
Confidence 89999988899999999999999999999887654 455667777776654
No 387
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.28 E-value=8.2e-12 Score=121.76 Aligned_cols=148 Identities=18% Similarity=0.122 Sum_probs=114.7
Q ss_pred HHHHHhcCCCccceeeeecceEEEEEEecCCcEEEEEeecccchhhHHHHHHHHHHHhhCC-CCeeeeeeeEEeCCCceE
Q 007668 301 DIIKKLETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIK-HRYLVNLRGYCNSPTSKL 379 (594)
Q Consensus 301 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~ 379 (594)
.+......|.....++.|+.+.||++... +..+++|............+.+|+++++.+. +..+.++++++......+
T Consensus 8 ~l~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~ 86 (263)
T 3tm0_A 8 ELKKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSN 86 (263)
T ss_dssp HHHHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEE
T ss_pred HHHHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceE
Confidence 34455677887888899999999998755 6889999887532222346889999999884 677888999988888899
Q ss_pred EEEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhc------------------------------------
Q 007668 380 LIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHD------------------------------------ 423 (594)
Q Consensus 380 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~------------------------------------ 423 (594)
+||||++|.+|.+.+.. ......++.++++++..||..
T Consensus 87 lv~e~i~G~~l~~~~~~------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (263)
T 3tm0_A 87 LLMSEADGVLCSEEYED------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEE 160 (263)
T ss_dssp EEEECCSSEEHHHHCCT------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGST
T ss_pred EEEEecCCeehhhccCC------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccc
Confidence 99999999999876421 122347888999999999971
Q ss_pred --------------------CCCCeeeCCCCCCCeEecCCCcEEEeeccccc
Q 007668 424 --------------------CSPRIIHRDIKSSNILLDGNLEARVSDFGLAK 455 (594)
Q Consensus 424 --------------------~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~ 455 (594)
....++|+|+++.||+++++..+.|+||+.+.
T Consensus 161 ~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 161 DTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp TCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred cccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 01458999999999999876556799998764
No 388
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.28 E-value=1.2e-13 Score=139.89 Aligned_cols=139 Identities=19% Similarity=0.162 Sum_probs=119.4
Q ss_pred CCCccceeEeCCCCcEEEEEcccCCCCCCCCccccCc--ccCCeeecccCccCCCCCCCcCCCCccceeecccccccCC-
Q 007668 59 DPCNWKGVKCDKNKRVITLSLTNHKLSGPISADLGKL--DQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGS- 135 (594)
Q Consensus 59 ~~c~w~gv~c~~~~~l~~L~L~~n~l~~~~~~~~~~l--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~- 135 (594)
-|..|.++.|+ ...++.|++++|.+. +..+..+ ++|+.|+|++|.+.+..+. +..+++|++|+|++|.+++.
T Consensus 35 vc~~W~~~~~~-~~~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~ 109 (336)
T 2ast_B 35 VCKRWYRLASD-ESLWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVST 109 (336)
T ss_dssp SCHHHHHHHTC-STTSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHH
T ss_pred HHHHHHHHhcC-chhheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHH
Confidence 34579998876 556889999999887 5667777 9999999999999977665 66899999999999999866
Q ss_pred CChhhhCCCCCceEeccCCcCCCCCCccccccCCCcEEEeecc-ccccc-CCC-CcccccCCcccccCCC
Q 007668 136 IPSELGNLSNLLNLDISSNSLSDYIPPSLGKLQRLITFNVSNN-FLVGA-IPS-DGVLTKFSESSFFGNR 202 (594)
Q Consensus 136 ~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N-~l~~~-~~~-~~~l~~l~~l~l~~N~ 202 (594)
+|..+..+++|++|+|++|.+++..+..+..+++|++|+|++| .+++. .+. ...+++|+.|++++|+
T Consensus 110 ~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~ 179 (336)
T 2ast_B 110 LHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCF 179 (336)
T ss_dssp HHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCT
T ss_pred HHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCC
Confidence 8888999999999999999999878888999999999999999 67752 333 4778999999999984
No 389
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.27 E-value=1.2e-13 Score=142.97 Aligned_cols=131 Identities=18% Similarity=0.238 Sum_probs=68.9
Q ss_pred CcEEEEEcccCCCCC----CCCccccCcccCCeeecccCccCCCCCCC----cCCC---------Cccceeeccccccc-
Q 007668 72 KRVITLSLTNHKLSG----PISADLGKLDQLKFLNLHSNNFYGEIPSE----LGNC---------TELQGLSLQSNYLS- 133 (594)
Q Consensus 72 ~~l~~L~L~~n~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~~p~~----~~~l---------~~L~~L~Ls~N~l~- 133 (594)
++|++|+|++|.|++ .++..+.++++|++|+|++|.|+...+.. +..+ ++|++|+|++|+|+
T Consensus 94 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~ 173 (386)
T 2ca6_A 94 PKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLEN 173 (386)
T ss_dssp TTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTG
T ss_pred CcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCc
Confidence 456666666666654 24455555666666666666654322222 2222 56666666666655
Q ss_pred CCCC---hhhhCCCCCceEeccCCcCCC-----CCCccccccCCCcEEEeeccccc----ccC-CCCcccccCCcccccC
Q 007668 134 GSIP---SELGNLSNLLNLDISSNSLSD-----YIPPSLGKLQRLITFNVSNNFLV----GAI-PSDGVLTKFSESSFFG 200 (594)
Q Consensus 134 ~~~p---~~~~~l~~L~~L~l~~N~l~~-----~~~~~~~~l~~L~~l~l~~N~l~----~~~-~~~~~l~~l~~l~l~~ 200 (594)
+.+| ..+..+++|++|+|++|+|+. ..|..+..+++|+.|+|++|.|+ +.+ .....+++|+.|++++
T Consensus 174 ~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~ 253 (386)
T 2ca6_A 174 GSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLND 253 (386)
T ss_dssp GGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTT
T ss_pred HHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCC
Confidence 2333 344555566666666666551 23335555666666666666653 222 2224455566666666
Q ss_pred CC
Q 007668 201 NR 202 (594)
Q Consensus 201 N~ 202 (594)
|+
T Consensus 254 n~ 255 (386)
T 2ca6_A 254 CL 255 (386)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 390
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.24 E-value=7.7e-13 Score=135.59 Aligned_cols=129 Identities=22% Similarity=0.216 Sum_probs=108.7
Q ss_pred EEEcccCCCCCCCCccccCcccCCeeecccCccCCCCC----CCcCCCC-ccceeecccccccCCCChhhhCC-----CC
Q 007668 76 TLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIP----SELGNCT-ELQGLSLQSNYLSGSIPSELGNL-----SN 145 (594)
Q Consensus 76 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p----~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l-----~~ 145 (594)
.+.|+.|++++.+|..+...++|++|+|++|.|++..+ ..|..++ +|++|+|++|.|++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 46899999999888888777889999999999996665 6788898 99999999999998878888776 99
Q ss_pred CceEeccCCcCCCCCCccccc----c-CCCcEEEeecccccccCCCC-----cc-cccCCcccccCCCCC
Q 007668 146 LLNLDISSNSLSDYIPPSLGK----L-QRLITFNVSNNFLVGAIPSD-----GV-LTKFSESSFFGNRGL 204 (594)
Q Consensus 146 L~~L~l~~N~l~~~~~~~~~~----l-~~L~~l~l~~N~l~~~~~~~-----~~-l~~l~~l~l~~N~~~ 204 (594)
|++|+|++|+|++..+..+.. + ++|+.|+|++|+|++..+.. .. .++|+.|++++|...
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~ 151 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLG 151 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGG
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCC
Confidence 999999999999866665544 4 89999999999998776532 12 358999999999744
No 391
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.13 E-value=7.1e-11 Score=114.79 Aligned_cols=136 Identities=15% Similarity=0.062 Sum_probs=99.6
Q ss_pred CCCccceeeeecceEEEEEEecCCcEEEEEeecccchhhHHHHHHHHHHHhhCCCCe--eeeeeeEEeCCCceEEEEEcc
Q 007668 308 TLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRY--LVNLRGYCNSPTSKLLIYDFL 385 (594)
Q Consensus 308 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~g~~~~~~~~~lv~e~~ 385 (594)
.+....+.+.|..+.||++...+|..+++|..... ....+.+|+++++.+.+.+ +.+++++....+..++||||+
T Consensus 21 ~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i 97 (264)
T 1nd4_A 21 GYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEV 97 (264)
T ss_dssp TCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECC
T ss_pred CCceEecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEec
Confidence 34433333456669999998877888999987653 1245788999998886544 456888888777889999999
Q ss_pred CCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcC-----------------------------------------
Q 007668 386 PGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDC----------------------------------------- 424 (594)
Q Consensus 386 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~----------------------------------------- 424 (594)
++.++. ... .+ ...++.++++.|..||...
T Consensus 98 ~G~~l~--~~~----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (264)
T 1nd4_A 98 PGQDLL--SSH----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPA 168 (264)
T ss_dssp SSEETT--TSC----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHH
T ss_pred CCcccC--cCc----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHH
Confidence 998884 211 12 2357788888888888531
Q ss_pred --------------CCCeeeCCCCCCCeEecCCCcEEEeeccccc
Q 007668 425 --------------SPRIIHRDIKSSNILLDGNLEARVSDFGLAK 455 (594)
Q Consensus 425 --------------~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~ 455 (594)
...++|+|++|.||+++++..+.|+||+.+.
T Consensus 169 ~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 169 ELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp HHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 1139999999999999877666799999875
No 392
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.11 E-value=9.2e-13 Score=139.59 Aligned_cols=131 Identities=20% Similarity=0.111 Sum_probs=71.2
Q ss_pred CcEEEEEcccCCCCCCC-----CccccCcccCCeeecccCccCCC----CCCCcCCCCccceeecccccccCCCChhhhC
Q 007668 72 KRVITLSLTNHKLSGPI-----SADLGKLDQLKFLNLHSNNFYGE----IPSELGNCTELQGLSLQSNYLSGSIPSELGN 142 (594)
Q Consensus 72 ~~l~~L~L~~n~l~~~~-----~~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 142 (594)
++|+.|+|++|.++... +..+..+++|++|+|++|+++.. ++..+..+++|++|+|++|.+++..+..+..
T Consensus 227 ~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~ 306 (461)
T 1z7x_W 227 ASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCE 306 (461)
T ss_dssp TTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHH
T ss_pred CCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHH
Confidence 56667777777665321 12223456666777776666632 4555555666666666666665433333322
Q ss_pred C-----CCCceEeccCCcCCCC----CCccccccCCCcEEEeecccccccCCCC-c-----ccccCCcccccCCC
Q 007668 143 L-----SNLLNLDISSNSLSDY----IPPSLGKLQRLITFNVSNNFLVGAIPSD-G-----VLTKFSESSFFGNR 202 (594)
Q Consensus 143 l-----~~L~~L~l~~N~l~~~----~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~-----~l~~l~~l~l~~N~ 202 (594)
. ++|++|+|++|.+++. ++..+..+++|+.|+|++|++++..+.. . ..++|+.|++++|+
T Consensus 307 ~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~ 381 (461)
T 1z7x_W 307 TLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCD 381 (461)
T ss_dssp HHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSC
T ss_pred HhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCC
Confidence 2 4666666666666543 2344455566666666666665432211 0 13456666666664
No 393
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.01 E-value=5.5e-12 Score=133.62 Aligned_cols=130 Identities=22% Similarity=0.189 Sum_probs=71.2
Q ss_pred cEEEEEcccCCCCC----CCCccccCcccCCeeecccCccCCCCCCCc-----CCCCccceeecccccccCC----CChh
Q 007668 73 RVITLSLTNHKLSG----PISADLGKLDQLKFLNLHSNNFYGEIPSEL-----GNCTELQGLSLQSNYLSGS----IPSE 139 (594)
Q Consensus 73 ~l~~L~L~~n~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~-----~~l~~L~~L~Ls~N~l~~~----~p~~ 139 (594)
+|++|+|++|+|+. .++..+.++++|++|+|++|.+++..+..+ ..+++|++|+|++|.+++. ++..
T Consensus 86 ~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 165 (461)
T 1z7x_W 86 KIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASV 165 (461)
T ss_dssp CCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHH
T ss_pred ceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHH
Confidence 46666666666662 345566666666666666666653222221 2244566666666666642 2444
Q ss_pred hhCCCCCceEeccCCcCCCCCCcccc-----ccCCCcEEEeeccccccc-----CCCCcccccCCcccccCCC
Q 007668 140 LGNLSNLLNLDISSNSLSDYIPPSLG-----KLQRLITFNVSNNFLVGA-----IPSDGVLTKFSESSFFGNR 202 (594)
Q Consensus 140 ~~~l~~L~~L~l~~N~l~~~~~~~~~-----~l~~L~~l~l~~N~l~~~-----~~~~~~l~~l~~l~l~~N~ 202 (594)
+..+++|++|+|++|.+++..+..+. .+++|+.|+|++|.++.. +.....+++|+.|++++|+
T Consensus 166 l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~ 238 (461)
T 1z7x_W 166 LRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNK 238 (461)
T ss_dssp HHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSB
T ss_pred HhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCc
Confidence 55556666666666666543232232 144666666666666542 1112345666666666664
No 394
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.00 E-value=1.1e-09 Score=111.96 Aligned_cols=142 Identities=17% Similarity=0.249 Sum_probs=106.9
Q ss_pred ccceeeeecceEEEEEEecCCcEEEEEeec--ccc-hhhHHHHHHHHHHHhhCC--CCeeeeeeeEEeCC---CceEEEE
Q 007668 311 DDHIIGSGGFGTVYKLAMDDGNVFALKRID--KLN-EGFDRFFERELEILGSIK--HRYLVNLRGYCNSP---TSKLLIY 382 (594)
Q Consensus 311 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~--~~~-~~~~~~~~~E~~~l~~l~--h~niv~l~g~~~~~---~~~~lv~ 382 (594)
..+.|+.|.++.||++...+ ..+++|+.. ... ......+.+|+++++.+. +..+.+++.++.+. +..++||
T Consensus 42 ~~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm 120 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM 120 (359)
T ss_dssp EEEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred eEEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence 34678999999999988764 578888776 322 122456888999999987 45678888888766 3478999
Q ss_pred EccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcC--------------------------------------
Q 007668 383 DFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDC-------------------------------------- 424 (594)
Q Consensus 383 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~-------------------------------------- 424 (594)
||+++..+.+.. ...++...+..++.++++.|+.||...
T Consensus 121 e~v~G~~l~~~~---~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (359)
T 3dxp_A 121 EFVSGRVLWDQS---LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAM 197 (359)
T ss_dssp ECCCCBCCCCTT---CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHH
T ss_pred EecCCeecCCCc---cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHH
Confidence 999998886532 233678888999999999999999720
Q ss_pred -----------------CCCeeeCCCCCCCeEecCCCc--EEEeecccccc
Q 007668 425 -----------------SPRIIHRDIKSSNILLDGNLE--ARVSDFGLAKL 456 (594)
Q Consensus 425 -----------------~~~ivH~Dlk~~NIll~~~~~--~~l~Dfgl~~~ 456 (594)
...++|||+++.||+++.++. +.|+||+.+..
T Consensus 198 ~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 198 DSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 257999999999999997653 68999998864
No 395
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.99 E-value=1e-11 Score=127.17 Aligned_cols=132 Identities=17% Similarity=0.144 Sum_probs=100.0
Q ss_pred CcEEEEEcccCCCCCCCCc-cccCcccCCeeecccCccCCCCCCCc-----CCCCccceeecccccccC----CCChhhh
Q 007668 72 KRVITLSLTNHKLSGPISA-DLGKLDQLKFLNLHSNNFYGEIPSEL-----GNCTELQGLSLQSNYLSG----SIPSELG 141 (594)
Q Consensus 72 ~~l~~L~L~~n~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~p~~~-----~~l~~L~~L~Ls~N~l~~----~~p~~~~ 141 (594)
.+|++|+|++|.|+..-.. ....+++|+.|+|++|+|+......+ ...++|++|+|++|.|+. .++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 6899999999999743222 33457899999999999974333333 346889999999999974 2455567
Q ss_pred CCCCCceEeccCCcCCCC----CCccccccCCCcEEEeecccccccCC-----CCcccccCCcccccCCCC
Q 007668 142 NLSNLLNLDISSNSLSDY----IPPSLGKLQRLITFNVSNNFLVGAIP-----SDGVLTKFSESSFFGNRG 203 (594)
Q Consensus 142 ~l~~L~~L~l~~N~l~~~----~~~~~~~l~~L~~l~l~~N~l~~~~~-----~~~~l~~l~~l~l~~N~~ 203 (594)
.+++|++|+|++|.|++. ++..+...++|+.|+|++|.|+.... .....++|+.|++++|+.
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i 251 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNEL 251 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSC
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCC
Confidence 889999999999999752 24566778899999999999975322 113458899999999974
No 396
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.97 E-value=2.5e-11 Score=117.17 Aligned_cols=65 Identities=29% Similarity=0.355 Sum_probs=33.5
Q ss_pred CCCccceeecccccccC--CCChhhhCCCCCceEeccCCcCCCCCCccccccC--CCcEEEeecccccccC
Q 007668 118 NCTELQGLSLQSNYLSG--SIPSELGNLSNLLNLDISSNSLSDYIPPSLGKLQ--RLITFNVSNNFLVGAI 184 (594)
Q Consensus 118 ~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~--~L~~l~l~~N~l~~~~ 184 (594)
++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|+.|+|++|++++..
T Consensus 168 ~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~ 236 (267)
T 3rw6_A 168 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTF 236 (267)
T ss_dssp HCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGC
T ss_pred hCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCcccc
Confidence 34555555555555554 2334445555555555555555542 2233333 5555555555555433
No 397
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.93 E-value=1e-09 Score=109.38 Aligned_cols=187 Identities=20% Similarity=0.201 Sum_probs=122.3
Q ss_pred cceeeeecceEEEEEEecCCcEEEEEeecccchhhHHHHHHHHHHHhhCC-CCe--eeeeeeEEeCCC---ceEEEEEcc
Q 007668 312 DHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIK-HRY--LVNLRGYCNSPT---SKLLIYDFL 385 (594)
Q Consensus 312 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~n--iv~l~g~~~~~~---~~~lv~e~~ 385 (594)
.+.++.|....||++. ..+++|..... .....+.+|+++++.+. +.. +.+++....... ..++||+++
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i 98 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI 98 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence 4568999999999863 46888875432 33567889999998873 322 334444433332 347899999
Q ss_pred CCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhc------------------------------------------
Q 007668 386 PGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHD------------------------------------------ 423 (594)
Q Consensus 386 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~------------------------------------------ 423 (594)
+|.++.+... ..++..++..++.++++.++.||..
T Consensus 99 ~G~~l~~~~~---~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 175 (304)
T 3sg8_A 99 KGVPLTPLLL---NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDD 175 (304)
T ss_dssp CCEECCHHHH---HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHH
T ss_pred CCeECCcccc---ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHH
Confidence 9998876433 2367778888888999988888851
Q ss_pred -------------CCCCeeeCCCCCCCeEecC--CCcEEEeecccccccccCCceeeee-------------eecccCcc
Q 007668 424 -------------CSPRIIHRDIKSSNILLDG--NLEARVSDFGLAKLLEDEESHITTI-------------VAGTFGYL 475 (594)
Q Consensus 424 -------------~~~~ivH~Dlk~~NIll~~--~~~~~l~Dfgl~~~~~~~~~~~~~~-------------~~gt~~y~ 475 (594)
..+.++|+|+++.||++++ +..+.++||+.+............. +....+..
T Consensus 176 ~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~~ 255 (304)
T 3sg8_A 176 FYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKHK 255 (304)
T ss_dssp HHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTCS
T ss_pred HHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCCC
Confidence 0145899999999999997 4567899999886533211000000 00000111
Q ss_pred C-ccccccCCCCccchhhhHHHHHHHHHhCCCCCC
Q 007668 476 A-PEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTD 509 (594)
Q Consensus 476 a-PE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~ 509 (594)
. |+.... .....+.|+++.++|++.+|..++.
T Consensus 256 ~~~~~~~r--~~~~~~~~~l~~~~~~~~~g~~~~~ 288 (304)
T 3sg8_A 256 DIPTVLEK--YRMKEKYWSFEKIIYGKEYGYMDWY 288 (304)
T ss_dssp CHHHHHHH--HHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred CcHHHHHH--HHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 1 222111 1223689999999999999988753
No 398
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.90 E-value=1.2e-09 Score=110.01 Aligned_cols=129 Identities=14% Similarity=0.149 Sum_probs=78.7
Q ss_pred CCcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCC--------------------------------
Q 007668 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGN-------------------------------- 118 (594)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-------------------------------- 118 (594)
..+|+.|+|.+ +++.+-+.+|.++++|+.|+|++|.+....+..|.+
T Consensus 100 ~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L 178 (329)
T 3sb4_A 100 KQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPL 178 (329)
T ss_dssp CTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCC
T ss_pred cCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccccccc
Confidence 36788999998 888666678999999999999999875343444443
Q ss_pred ----------------------------------------------CCccceeecccccccCCCChhhhCCCCCceEecc
Q 007668 119 ----------------------------------------------CTELQGLSLQSNYLSGSIPSELGNLSNLLNLDIS 152 (594)
Q Consensus 119 ----------------------------------------------l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 152 (594)
+++|+.|+|++|+++...+..|.++++|+.|+|.
T Consensus 179 ~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~ 258 (329)
T 3sb4_A 179 ETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLP 258 (329)
T ss_dssp EEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECC
T ss_pred ceeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECC
Confidence 3455555555555553333445555566666665
Q ss_pred CCcCCCCCCccccccCCCc-EEEeecccccccCCCC-cccccCCcccccCCC
Q 007668 153 SNSLSDYIPPSLGKLQRLI-TFNVSNNFLVGAIPSD-GVLTKFSESSFFGNR 202 (594)
Q Consensus 153 ~N~l~~~~~~~~~~l~~L~-~l~l~~N~l~~~~~~~-~~l~~l~~l~l~~N~ 202 (594)
+| ++.+.+..|.++++|+ .|++.+ .++.+.+.. ..+++|+.+++.+|.
T Consensus 259 ~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~ 308 (329)
T 3sb4_A 259 HN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDK 308 (329)
T ss_dssp TT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSC
T ss_pred cc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCc
Confidence 55 5544445555666665 565555 454444433 455555555555543
No 399
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.86 E-value=3.1e-09 Score=107.14 Aligned_cols=102 Identities=13% Similarity=-0.012 Sum_probs=90.0
Q ss_pred cccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhhCCCCCc-eEeccCCcCCCCCCccccccCCCcEE
Q 007668 95 LDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLL-NLDISSNSLSDYIPPSLGKLQRLITF 173 (594)
Q Consensus 95 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~-~L~l~~N~l~~~~~~~~~~l~~L~~l 173 (594)
+++|+.|+|++|+++...+..|.++++|+.|+|++| ++..-+..|.++++|+ .|+|.+ .++.+.+..|.++++|+.|
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 678999999999999666678999999999999998 7756667899999999 999999 8887778999999999999
Q ss_pred EeecccccccCCCC-cccccCCcccc
Q 007668 174 NVSNNFLVGAIPSD-GVLTKFSESSF 198 (594)
Q Consensus 174 ~l~~N~l~~~~~~~-~~l~~l~~l~l 198 (594)
++++|+++.+.+.. ..+++|+.++.
T Consensus 303 ~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 303 LATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp EECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred EeCCCccCccchhhhcCCcchhhhcc
Confidence 99999999888765 77888887754
No 400
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.83 E-value=3.5e-11 Score=123.27 Aligned_cols=132 Identities=16% Similarity=0.093 Sum_probs=99.2
Q ss_pred CcEEEEEcccCCCCCCCCccccCc-----ccCCeeecccCccCCCCCCC-cCCCCccceeecccccccCCCChhh-----
Q 007668 72 KRVITLSLTNHKLSGPISADLGKL-----DQLKFLNLHSNNFYGEIPSE-LGNCTELQGLSLQSNYLSGSIPSEL----- 140 (594)
Q Consensus 72 ~~l~~L~L~~n~l~~~~~~~~~~l-----~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~p~~~----- 140 (594)
++|+.|+|++|.|+......+... ++|++|+|++|.|+...... ...+++|+.|+|++|.|+..-...+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 579999999999985444444433 79999999999997432222 3457789999999999985444444
Q ss_pred hCCCCCceEeccCCcCCCC----CCccccccCCCcEEEeecccccccC-----CCCcccccCCcccccCCCC
Q 007668 141 GNLSNLLNLDISSNSLSDY----IPPSLGKLQRLITFNVSNNFLVGAI-----PSDGVLTKFSESSFFGNRG 203 (594)
Q Consensus 141 ~~l~~L~~L~l~~N~l~~~----~~~~~~~l~~L~~l~l~~N~l~~~~-----~~~~~l~~l~~l~l~~N~~ 203 (594)
...++|++|+|++|.|++. ++..+..+++|++|+|++|.|+... ......++|+.|++++|..
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i 223 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGA 223 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCC
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCC
Confidence 2468899999999999752 3445577899999999999997532 1224567899999999963
No 401
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.67 E-value=1.9e-09 Score=103.96 Aligned_cols=80 Identities=26% Similarity=0.397 Sum_probs=65.5
Q ss_pred cCcccCCeeecccCccCC--CCCCCcCCCCccceeecccccccCCCChhhhCCC--CCceEeccCCcCCCCCCc------
Q 007668 93 GKLDQLKFLNLHSNNFYG--EIPSELGNCTELQGLSLQSNYLSGSIPSELGNLS--NLLNLDISSNSLSDYIPP------ 162 (594)
Q Consensus 93 ~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~l~~N~l~~~~~~------ 162 (594)
.++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|.+.+.+|.
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~ 244 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYIS 244 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHH
Confidence 468899999999999997 4556777899999999999999954 3345555 999999999999976663
Q ss_pred -cccccCCCcEEE
Q 007668 163 -SLGKLQRLITFN 174 (594)
Q Consensus 163 -~~~~l~~L~~l~ 174 (594)
.+..+|+|+.||
T Consensus 245 ~il~~~P~L~~LD 257 (267)
T 3rw6_A 245 AIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHCTTCCEES
T ss_pred HHHHHCcccCeEC
Confidence 367888998875
No 402
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.67 E-value=4.7e-10 Score=122.70 Aligned_cols=131 Identities=15% Similarity=0.092 Sum_probs=83.4
Q ss_pred CcEEEEEcccCCCCCCCCccccC-cccCCeeecc----cCccCCC-----CCCCcCCCCccceeecccc--cccCCCChh
Q 007668 72 KRVITLSLTNHKLSGPISADLGK-LDQLKFLNLH----SNNFYGE-----IPSELGNCTELQGLSLQSN--YLSGSIPSE 139 (594)
Q Consensus 72 ~~l~~L~L~~n~l~~~~~~~~~~-l~~L~~L~L~----~N~l~~~-----~p~~~~~l~~L~~L~Ls~N--~l~~~~p~~ 139 (594)
++|++|+|+.|++++..+..+.. +++|+.|+|+ .|.+++. ++..+.++++|+.|+|++| .+++..+..
T Consensus 378 ~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~ 457 (592)
T 3ogk_B 378 QELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSY 457 (592)
T ss_dssp TTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHH
T ss_pred ccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHH
Confidence 45666666666666544444544 6677777775 5666642 2223556777777777643 355444444
Q ss_pred hh-CCCCCceEeccCCcCCC-CCCccccccCCCcEEEeeccccccc-CCCC-cccccCCcccccCCC
Q 007668 140 LG-NLSNLLNLDISSNSLSD-YIPPSLGKLQRLITFNVSNNFLVGA-IPSD-GVLTKFSESSFFGNR 202 (594)
Q Consensus 140 ~~-~l~~L~~L~l~~N~l~~-~~~~~~~~l~~L~~l~l~~N~l~~~-~~~~-~~l~~l~~l~l~~N~ 202 (594)
+. .+++|+.|+|++|++++ .++..+..+++|+.|+|++|+++.. ++.. ..+++|+.|++++|+
T Consensus 458 ~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~ 524 (592)
T 3ogk_B 458 IGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYR 524 (592)
T ss_dssp HHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCB
T ss_pred HHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCc
Confidence 43 37788888888888765 2344556778888888888887543 2222 467788888888887
No 403
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.65 E-value=3.6e-09 Score=115.57 Aligned_cols=104 Identities=13% Similarity=0.152 Sum_probs=64.9
Q ss_pred cEEEEEcccCC-CC-CCCCccccCcccCCeeecccCccCCC----CCCCcCCCCccceeeccccccc----CCCChhhhC
Q 007668 73 RVITLSLTNHK-LS-GPISADLGKLDQLKFLNLHSNNFYGE----IPSELGNCTELQGLSLQSNYLS----GSIPSELGN 142 (594)
Q Consensus 73 ~l~~L~L~~n~-l~-~~~~~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~----~~~p~~~~~ 142 (594)
+|++|+|++|. ++ ..++....++++|++|+|++|.+++. ++..+.++++|++|+|++|.++ +.++..+.+
T Consensus 139 ~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~ 218 (592)
T 3ogk_B 139 DLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARN 218 (592)
T ss_dssp GCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHH
T ss_pred cCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhh
Confidence 47777777765 21 01222233667777777777777644 2233456677777777777776 233444566
Q ss_pred CCCCceEeccCCcCCCCCCccccccCCCcEEEeec
Q 007668 143 LSNLLNLDISSNSLSDYIPPSLGKLQRLITFNVSN 177 (594)
Q Consensus 143 l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~ 177 (594)
+++|+.|+|++|.+.+ +|..+..+++|+.|+++.
T Consensus 219 ~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~ 252 (592)
T 3ogk_B 219 CRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGS 252 (592)
T ss_dssp CTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECB
T ss_pred CCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccc
Confidence 7777777777777765 556666666666666664
No 404
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.65 E-value=2.7e-07 Score=92.42 Aligned_cols=144 Identities=17% Similarity=0.238 Sum_probs=104.6
Q ss_pred HHHHHhc---CCCccceeeeecceEEEEEEecCCcEEEEEeecccchhhHHHHHHHHHHHhhCCC----CeeeeeeeEEe
Q 007668 301 DIIKKLE---TLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIKH----RYLVNLRGYCN 373 (594)
Q Consensus 301 ~~~~~~~---~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~l~g~~~ 373 (594)
.+...+. .+...+.++.|....||++ +..+++|+.... .....+.+|.+++..+.+ ..+.+++++
T Consensus 28 ~i~~~~g~~~~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~--~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~-- 99 (320)
T 3r70_A 28 EIYEHLNKQIKINELRYLSSGDDSDTFLC----NEQYVVKVPKRD--SVRISQKRELELYRFLENCKLSYQIPAVVYQ-- 99 (320)
T ss_dssp HHHHHHHHHSCCSCEEEEEECSSEEEEEE----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE--
T ss_pred HHHHHcCCCcceEEEEeCCCCCCceEEEE----CCEEEEEeCCcH--HHHHHHHHHHHHHHHHHhcCCCCCcceEEec--
Confidence 3444444 5666788999999999997 667888876432 223468899999888865 223344444
Q ss_pred CCCceEEEEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcC-----------------------------
Q 007668 374 SPTSKLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDC----------------------------- 424 (594)
Q Consensus 374 ~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~----------------------------- 424 (594)
+..++||||++|.++.+... ..++..++..++.++++.++.||...
T Consensus 100 --~~~~lvme~i~G~~l~~~~~---~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (320)
T 3r70_A 100 --SDRFNIMKYIKGERITYEQY---HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISI 174 (320)
T ss_dssp --CSSCEEEECCCCBCCCHHHH---TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHH
T ss_pred --CCcEEEEeecCCcccccccc---ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHH
Confidence 46789999999998875432 23566777788888888888888431
Q ss_pred -------------------------------CCCeeeCCCCCCCeEecCCCcEEEeeccccccc
Q 007668 425 -------------------------------SPRIIHRDIKSSNILLDGNLEARVSDFGLAKLL 457 (594)
Q Consensus 425 -------------------------------~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~ 457 (594)
.+.++|+|+++.||+++++..+.|+||+.+...
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 175 LEKEQLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp HHHTTCCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred HhhcccccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 123599999999999998666799999988643
No 405
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.60 E-value=3.3e-07 Score=90.04 Aligned_cols=139 Identities=20% Similarity=0.233 Sum_probs=93.3
Q ss_pred ccceeeeecceEEEEEEecCCcEEEEEeecccchhhHHHHHHHHHHHhhCCCC---eeeeeeeEEeCCCceEEEEEccCC
Q 007668 311 DDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIKHR---YLVNLRGYCNSPTSKLLIYDFLPG 387 (594)
Q Consensus 311 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~g~~~~~~~~~lv~e~~~~ 387 (594)
..+.|+.|.++.||++...+|..++||+...........|.+|++.++.+++. .+.+++++. ..++||||+++
T Consensus 19 ~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g 94 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDE 94 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCC
T ss_pred ceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEeccc
Confidence 35789999999999999889999999986543333346789999999999865 577777763 46899999999
Q ss_pred Cchhh-----------hhhhcCC--------------------CCCHHHHHH---H-----------------HHHHHHH
Q 007668 388 GSLDE-----------ALHERSE--------------------QLDWDARLN---I-----------------IMGAAKG 416 (594)
Q Consensus 388 gsL~~-----------~l~~~~~--------------------~l~~~~~~~---i-----------------~~~ia~~ 416 (594)
+.+.. .+|.... .-+|..... + ...+-+.
T Consensus 95 ~~~~~~~~~~lg~~LA~LH~~~~~~fG~~~~~~~G~~~q~~~w~~~W~~f~~~~rl~~~l~~a~~~~~~~~~~~~~~~~l 174 (288)
T 3d1u_A 95 RPPTPEAAERFGHQLAAMHLAGAESFGATWDGYIGPLPMDNTPRSTWPEFYAEQRILPYLRRAADRGALTPGDVRLVEKV 174 (288)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHHTHHHHHHHHHTTSSCHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHHHcCCCCccCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 87532 1232110 023432210 0 1111122
Q ss_pred HHHhh----hcCCCCeeeCCCCCCCeEecCCCcEEEeeccccc
Q 007668 417 LAYLH----HDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAK 455 (594)
Q Consensus 417 L~~LH----~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~ 455 (594)
+..+. ....+.++|+|+.+.||+++. +.+.|+|| .+.
T Consensus 175 ~~~l~~~l~~~~~~~l~HgD~~~~N~l~~~-~~~~~iD~-~~~ 215 (288)
T 3d1u_A 175 LDALDHLAGDPEPPARIHGDLWNGNVLWQD-DGAVVIDP-AAH 215 (288)
T ss_dssp HHTHHHHTCSCCCCEEECSCCSGGGEEEET-TEEEECSC-CCE
T ss_pred HHHHHHHhcCCCCCcceECCCCcCcEEEeC-CCeEEEcC-CcC
Confidence 22232 122568999999999999987 46889999 554
No 406
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.57 E-value=2.5e-09 Score=98.00 Aligned_cols=111 Identities=21% Similarity=0.262 Sum_probs=70.5
Q ss_pred CCcEEEEEcccC-CCCC----CCCccccCcccCCeeecccCccCCC----CCCCcCCCCccceeecccccccCC----CC
Q 007668 71 NKRVITLSLTNH-KLSG----PISADLGKLDQLKFLNLHSNNFYGE----IPSELGNCTELQGLSLQSNYLSGS----IP 137 (594)
Q Consensus 71 ~~~l~~L~L~~n-~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p 137 (594)
.++|++|+|++| .|.. .+...+...++|++|+|++|.|... +...+...++|++|+|++|.|+.. +.
T Consensus 35 ~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~ 114 (185)
T 1io0_A 35 DPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALV 114 (185)
T ss_dssp CTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHH
T ss_pred CCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHH
Confidence 456777888887 7762 1334455567778888888877531 233344556777777877777732 34
Q ss_pred hhhhCCCCCceEec--cCCcCCCC----CCccccccCCCcEEEeeccccc
Q 007668 138 SELGNLSNLLNLDI--SSNSLSDY----IPPSLGKLQRLITFNVSNNFLV 181 (594)
Q Consensus 138 ~~~~~l~~L~~L~l--~~N~l~~~----~~~~~~~l~~L~~l~l~~N~l~ 181 (594)
..+...++|++|+| ++|.|... +...+...++|+.|+|++|.+.
T Consensus 115 ~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 115 EALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 45666677777777 67777642 2234445577777777777764
No 407
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.48 E-value=5.3e-09 Score=114.31 Aligned_cols=129 Identities=11% Similarity=0.128 Sum_probs=72.0
Q ss_pred CcEEEEEcccCCCCCCCCcccc-CcccCCeeecc--c----CccCCCCC------CCcCCCCccceeecccccccCCCCh
Q 007668 72 KRVITLSLTNHKLSGPISADLG-KLDQLKFLNLH--S----NNFYGEIP------SELGNCTELQGLSLQSNYLSGSIPS 138 (594)
Q Consensus 72 ~~l~~L~L~~n~l~~~~~~~~~-~l~~L~~L~L~--~----N~l~~~~p------~~~~~l~~L~~L~Ls~N~l~~~~p~ 138 (594)
++|+.|.+..|++++.....+. .+++|+.|+|+ + |.++ ..| ..+.++++|+.|+|++ .+++..+.
T Consensus 372 ~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~-~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~ 449 (594)
T 2p1m_B 372 PKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLT-LEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFE 449 (594)
T ss_dssp TTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTT-CCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHH
T ss_pred hhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCccccc-CCchhhHHHHHHhhCCCccEEeecC-cccHHHHH
Confidence 3455555555555533333333 35666666666 3 4444 111 1144566677777755 45444444
Q ss_pred hhhC-CCCCceEeccCCcCCCCCCccc-cccCCCcEEEeecccccccCC--CCcccccCCcccccCCC
Q 007668 139 ELGN-LSNLLNLDISSNSLSDYIPPSL-GKLQRLITFNVSNNFLVGAIP--SDGVLTKFSESSFFGNR 202 (594)
Q Consensus 139 ~~~~-l~~L~~L~l~~N~l~~~~~~~~-~~l~~L~~l~l~~N~l~~~~~--~~~~l~~l~~l~l~~N~ 202 (594)
.+.. +++|+.|+|++|.+++..+..+ ..+++|+.|+|++|++++... ....+++|+.|++++|+
T Consensus 450 ~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~ 517 (594)
T 2p1m_B 450 YIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCS 517 (594)
T ss_dssp HHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSC
T ss_pred HHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCC
Confidence 4443 6677777777777654333333 456777777777777743322 12456777777777765
No 408
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.44 E-value=2.4e-06 Score=84.78 Aligned_cols=136 Identities=18% Similarity=0.170 Sum_probs=93.8
Q ss_pred cceeeeecceEEEEEEecCCcEEEEEeecccchhhHHHHHHHHHHHhhCCCC---eeeeeeeEEe-CCCceEEEEEccCC
Q 007668 312 DHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIKHR---YLVNLRGYCN-SPTSKLLIYDFLPG 387 (594)
Q Consensus 312 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~g~~~-~~~~~~lv~e~~~~ 387 (594)
.+.++.|....||+. |..+++|.-.. ......+.+|++++..+.+. .+.+.+.++. ..+..++||||++|
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 356889999999987 56678887432 23356789999999999652 3556666663 44557899999999
Q ss_pred CchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhc--------------------------------------------
Q 007668 388 GSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHD-------------------------------------------- 423 (594)
Q Consensus 388 gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~-------------------------------------------- 423 (594)
..+.+... ..++...+..++.++++.|+.||..
T Consensus 98 ~~l~~~~~---~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 174 (306)
T 3tdw_A 98 QILGEDGM---AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTL 174 (306)
T ss_dssp EECHHHHH---TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHH
T ss_pred eECchhhh---hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHH
Confidence 88876321 1234444555555555555555532
Q ss_pred -------------CCCCeeeCCCCCCCeEecC---CCc-EEEeecccccc
Q 007668 424 -------------CSPRIIHRDIKSSNILLDG---NLE-ARVSDFGLAKL 456 (594)
Q Consensus 424 -------------~~~~ivH~Dlk~~NIll~~---~~~-~~l~Dfgl~~~ 456 (594)
..+.++|+|+++.||+++. ++. +.|+||+.+..
T Consensus 175 ~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 175 RFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 1336799999999999987 455 48999997764
No 409
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.42 E-value=1.3e-08 Score=93.14 Aligned_cols=115 Identities=16% Similarity=0.110 Sum_probs=88.3
Q ss_pred CCccccCcccCCeeecccC-ccCC----CCCCCcCCCCccceeecccccccCC----CChhhhCCCCCceEeccCCcCCC
Q 007668 88 ISADLGKLDQLKFLNLHSN-NFYG----EIPSELGNCTELQGLSLQSNYLSGS----IPSELGNLSNLLNLDISSNSLSD 158 (594)
Q Consensus 88 ~~~~~~~l~~L~~L~L~~N-~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~ 158 (594)
+...+...++|++|+|++| .|.. .+...+...++|++|+|++|.|... +...+...++|++|+|++|.|.+
T Consensus 28 l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~ 107 (185)
T 1io0_A 28 LKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISG 107 (185)
T ss_dssp HHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCH
T ss_pred HHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCH
Confidence 3345667899999999999 8863 2344567789999999999999742 34556677899999999999985
Q ss_pred C----CCccccccCCCcEEEe--ecccccccCC-----CCcccccCCcccccCCC
Q 007668 159 Y----IPPSLGKLQRLITFNV--SNNFLVGAIP-----SDGVLTKFSESSFFGNR 202 (594)
Q Consensus 159 ~----~~~~~~~l~~L~~l~l--~~N~l~~~~~-----~~~~l~~l~~l~l~~N~ 202 (594)
. +...+...++|++|+| ++|.|+..-. .....++|+.|++++|.
T Consensus 108 ~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~ 162 (185)
T 1io0_A 108 SGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQ 162 (185)
T ss_dssp HHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSS
T ss_pred HHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCC
Confidence 3 3456778889999999 8899975321 12445789999999885
No 410
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.37 E-value=1.3e-08 Score=111.27 Aligned_cols=129 Identities=16% Similarity=0.172 Sum_probs=77.2
Q ss_pred CcEEEEEcccCCCCCCCCcccc-CcccCCeeecccC-ccCCC-CCCCcCCCCccceeecccccccCCCChhhh----CCC
Q 007668 72 KRVITLSLTNHKLSGPISADLG-KLDQLKFLNLHSN-NFYGE-IPSELGNCTELQGLSLQSNYLSGSIPSELG----NLS 144 (594)
Q Consensus 72 ~~l~~L~L~~n~l~~~~~~~~~-~l~~L~~L~L~~N-~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~----~l~ 144 (594)
++|++|+|++|.+++..+..+. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+. .++
T Consensus 105 ~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~ 184 (594)
T 2p1m_B 105 TWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYT 184 (594)
T ss_dssp TTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCC
T ss_pred CCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCC
Confidence 5677777777777755555554 5777777777777 44421 333344677777777777777654444333 556
Q ss_pred CCceEeccCCcCCCCCCcc----ccccCCCcEEEeecc-cccccCCCCcccccCCcccccCC
Q 007668 145 NLLNLDISSNSLSDYIPPS----LGKLQRLITFNVSNN-FLVGAIPSDGVLTKFSESSFFGN 201 (594)
Q Consensus 145 ~L~~L~l~~N~l~~~~~~~----~~~l~~L~~l~l~~N-~l~~~~~~~~~l~~l~~l~l~~N 201 (594)
+|+.|+|++|. ..+.... +..+++|+.|+|++| .+++.+.....+++|+.|++.++
T Consensus 185 ~L~~L~l~~~~-~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~~~ 245 (594)
T 2p1m_B 185 SLVSLNISCLA-SEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGY 245 (594)
T ss_dssp CCCEEECTTCC-SCCCHHHHHHHHHHCTTCCEEECCTTSCHHHHHHHHHHCTTCSEEECSBC
T ss_pred cCcEEEecccC-CcCCHHHHHHHHHhCCCCcEEecCCCCcHHHHHHHHhcCCcceEcccccc
Confidence 77777777776 2111122 234577777777777 44432222245666666665544
No 411
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.32 E-value=3.7e-06 Score=81.79 Aligned_cols=135 Identities=21% Similarity=0.213 Sum_probs=96.4
Q ss_pred ceeeeecce-EEEEEEec-CCcEEEEEeecccchhhHHHHHHHHHHHhhCC-CCeeeeeeeEEeCCCceEEEEEccCCCc
Q 007668 313 HIIGSGGFG-TVYKLAMD-DGNVFALKRIDKLNEGFDRFFERELEILGSIK-HRYLVNLRGYCNSPTSKLLIYDFLPGGS 389 (594)
Q Consensus 313 ~~lG~G~~g-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~lv~e~~~~gs 389 (594)
+.+..|..| .||+.... ++..+++|+-... ....+.+|...++.+. +--+.++++++.+.+..++|||++++.+
T Consensus 30 ~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~ 106 (272)
T 4gkh_A 30 ARDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKT 106 (272)
T ss_dssp EEEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEE
T ss_pred EEccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcc
Confidence 345566665 68987665 4567888875432 3456888999988874 3336678888888888999999999988
Q ss_pred hhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhc----------------------------------------------
Q 007668 390 LDEALHERSEQLDWDARLNIIMGAAKGLAYLHHD---------------------------------------------- 423 (594)
Q Consensus 390 L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~---------------------------------------------- 423 (594)
+.+..... ......++.++++.|..||..
T Consensus 107 ~~~~~~~~-----~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (272)
T 4gkh_A 107 AFQVLEEY-----PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWK 181 (272)
T ss_dssp HHHHHHHC-----GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHH
T ss_pred ccccccCC-----HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHH
Confidence 87765321 122334666666777777632
Q ss_pred ---------CCCCeeeCCCCCCCeEecCCCcEEEeeccccc
Q 007668 424 ---------CSPRIIHRDIKSSNILLDGNLEARVSDFGLAK 455 (594)
Q Consensus 424 ---------~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~ 455 (594)
....++|+|+.+.||++++++.+-|+||+.+.
T Consensus 182 ~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 182 EMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp HHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 01248899999999999987777899999775
No 412
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.32 E-value=2.6e-06 Score=86.61 Aligned_cols=142 Identities=13% Similarity=0.160 Sum_probs=89.6
Q ss_pred CccceeeeecceEEEEEEecCCcEEEEEeecccchhhHHHHHHHHHHHhhCCCCe--eeeeeeEEeCC-CceEEEEEccC
Q 007668 310 DDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRY--LVNLRGYCNSP-TSKLLIYDFLP 386 (594)
Q Consensus 310 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~g~~~~~-~~~~lv~e~~~ 386 (594)
...+.++.|....+|+... ++..+++|..... ..+.+|+.++..+.... +.++++++... ...++||||++
T Consensus 44 ~~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~ 117 (362)
T 3ovc_A 44 SDLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQ 117 (362)
T ss_dssp EEEEEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCC
T ss_pred ceEEECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecC
Confidence 3456789999999999875 5788899876432 25788999998886433 45666666554 56789999998
Q ss_pred CCchhhh------------------hhhcC--C---------C-----CCHHHH---------------------HHHHH
Q 007668 387 GGSLDEA------------------LHERS--E---------Q-----LDWDAR---------------------LNIIM 411 (594)
Q Consensus 387 ~gsL~~~------------------l~~~~--~---------~-----l~~~~~---------------------~~i~~ 411 (594)
+..+.+. +|... . . -+|... .....
T Consensus 118 G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 197 (362)
T 3ovc_A 118 GVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVAQ 197 (362)
T ss_dssp SEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHHHH
T ss_pred CCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccchH
Confidence 8766421 11100 0 0 011111 01111
Q ss_pred HHHHHHHHhhhc-CCCCeeeCCCCCCCeEecCCCcEEEeeccccccc
Q 007668 412 GAAKGLAYLHHD-CSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLL 457 (594)
Q Consensus 412 ~ia~~L~~LH~~-~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~ 457 (594)
.+...+.++... ..+.++|+|+.+.||++++++.+.|+||+.+..-
T Consensus 198 ~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~g 244 (362)
T 3ovc_A 198 ALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFG 244 (362)
T ss_dssp HHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEE
T ss_pred HHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccC
Confidence 122222233211 0256899999999999987777889999988653
No 413
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.30 E-value=6.3e-08 Score=98.27 Aligned_cols=127 Identities=17% Similarity=0.137 Sum_probs=59.0
Q ss_pred CcEEEEEcccCC-CCCCCCccccCcccCCeeecccCccCCCCCCCcC--CCCccceeeccc--ccccCC-----CChhh-
Q 007668 72 KRVITLSLTNHK-LSGPISADLGKLDQLKFLNLHSNNFYGEIPSELG--NCTELQGLSLQS--NYLSGS-----IPSEL- 140 (594)
Q Consensus 72 ~~l~~L~L~~n~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~--~l~~L~~L~Ls~--N~l~~~-----~p~~~- 140 (594)
++|+.|+|++|. ++ ++. + .+++|+.|+|..|.+.......+. .+++|+.|+|+. |...+. +...+
T Consensus 172 P~L~~L~L~g~~~l~--l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~ 247 (362)
T 2ra8_A 172 PLLNNLKIKGTNNLS--IGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFS 247 (362)
T ss_dssp TTCCEEEEECCBTCB--CCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSC
T ss_pred CCCcEEEEeCCCCce--ecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHh
Confidence 456666665552 22 222 2 255666666666555422111222 456666666542 111111 11111
Q ss_pred -hCCCCCceEeccCCcCCCCCCcccc---ccCCCcEEEeeccccccc-----CCCCcccccCCcccccCCC
Q 007668 141 -GNLSNLLNLDISSNSLSDYIPPSLG---KLQRLITFNVSNNFLVGA-----IPSDGVLTKFSESSFFGNR 202 (594)
Q Consensus 141 -~~l~~L~~L~l~~N~l~~~~~~~~~---~l~~L~~l~l~~N~l~~~-----~~~~~~l~~l~~l~l~~N~ 202 (594)
..+++|+.|+|++|.+.+..+..+. .+++|++|+|+.|.|+.. ......+++|+.|++++|.
T Consensus 248 ~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~ 318 (362)
T 2ra8_A 248 KDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNY 318 (362)
T ss_dssp TTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBB
T ss_pred cCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCc
Confidence 2355666666666665532222222 355666666666666542 1111345566666665553
No 414
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.30 E-value=1.3e-06 Score=88.82 Aligned_cols=80 Identities=8% Similarity=0.049 Sum_probs=55.3
Q ss_pred cee-eeecceEEEEEEec-------CCcEEEEEeecccc---hhhHHHHHHHHHHHhhCCC---CeeeeeeeEEeCC---
Q 007668 313 HII-GSGGFGTVYKLAMD-------DGNVFALKRIDKLN---EGFDRFFERELEILGSIKH---RYLVNLRGYCNSP--- 375 (594)
Q Consensus 313 ~~l-G~G~~g~Vy~~~~~-------~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h---~niv~l~g~~~~~--- 375 (594)
+.| +.|....+|+.... ++..+++|...... ......+.+|+.+++.+.. -.+.+++.++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 567 88999999998765 26678888765432 1012457788888887742 3466777777654
Q ss_pred CceEEEEEccCCCchhh
Q 007668 376 TSKLLIYDFLPGGSLDE 392 (594)
Q Consensus 376 ~~~~lv~e~~~~gsL~~ 392 (594)
...++||||+++..+.+
T Consensus 106 g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp SSCEEEEECCCCBCCCB
T ss_pred CCceEEEEecCCCChhh
Confidence 34689999999877654
No 415
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.30 E-value=9.3e-07 Score=91.20 Aligned_cols=126 Identities=14% Similarity=0.150 Sum_probs=98.4
Q ss_pred CcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeeccccccc-----CCCChhhhCCCCC
Q 007668 72 KRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLS-----GSIPSELGNLSNL 146 (594)
Q Consensus 72 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-----~~~p~~~~~l~~L 146 (594)
.+|+.|+|.+| ++.+-..+|.+ .+|+.+.| .|.++...+..|.++++|+.++|.+|.+. ..-+..|.++++|
T Consensus 226 ~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L 302 (401)
T 4fdw_A 226 SQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKL 302 (401)
T ss_dssp TTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTC
T ss_pred CCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccC
Confidence 57888888875 66455667777 78999999 45566566778999999999999888775 3456678999999
Q ss_pred ceEeccCCcCCCCCCccccccCCCcEEEeecccccccCCCC-cccccCCcccccCCCC
Q 007668 147 LNLDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSD-GVLTKFSESSFFGNRG 203 (594)
Q Consensus 147 ~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~l~~l~~l~l~~N~~ 203 (594)
+.++|. |.++.+-...|.++++|+.|+|.+| ++.+.... ..+ +|+.+.+.+|..
T Consensus 303 ~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~ 357 (401)
T 4fdw_A 303 ARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTP 357 (401)
T ss_dssp CEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSC
T ss_pred CeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCC
Confidence 999998 4587767788999999999999655 76665554 556 899999988853
No 416
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.27 E-value=1.1e-06 Score=90.78 Aligned_cols=125 Identities=14% Similarity=0.084 Sum_probs=103.0
Q ss_pred CcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhhCCCCCceEec
Q 007668 72 KRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLDI 151 (594)
Q Consensus 72 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 151 (594)
.+|+.+.|.++ ++.+-...|.++++|+.|+|.+| ++..-...|.+ .+|+.+.| .|.++..-+..|.++++|+.+++
T Consensus 203 ~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l 278 (401)
T 4fdw_A 203 AGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTT 278 (401)
T ss_dssp CCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEE
T ss_pred cccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEe
Confidence 57889999854 77667779999999999999986 56456667877 89999999 55677566778999999999999
Q ss_pred cCCcCC-----CCCCccccccCCCcEEEeecccccccCCCC-cccccCCcccccCC
Q 007668 152 SSNSLS-----DYIPPSLGKLQRLITFNVSNNFLVGAIPSD-GVLTKFSESSFFGN 201 (594)
Q Consensus 152 ~~N~l~-----~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~l~~l~~l~l~~N 201 (594)
.+|.+. .+.+..|.++++|+.++|. |.++.+.... ..+.+|+.+.+..|
T Consensus 279 ~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~ 333 (401)
T 4fdw_A 279 YGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN 333 (401)
T ss_dssp ESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT
T ss_pred CCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc
Confidence 999876 4567889999999999999 5587776655 67899999999766
No 417
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.18 E-value=2.2e-07 Score=94.30 Aligned_cols=130 Identities=18% Similarity=0.220 Sum_probs=89.2
Q ss_pred CCcEEEEEcccCCCCCCCCcccc--CcccCCeeeccc--CccCCC-----CCCCc--CCCCccceeecccccccCCCChh
Q 007668 71 NKRVITLSLTNHKLSGPISADLG--KLDQLKFLNLHS--NNFYGE-----IPSEL--GNCTELQGLSLQSNYLSGSIPSE 139 (594)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~--~l~~L~~L~L~~--N~l~~~-----~p~~~--~~l~~L~~L~Ls~N~l~~~~p~~ 139 (594)
..+|+.|+|..+.++......+. .+|+|+.|+|+. |...+. +...+ ..+++|++|+|++|.+++..+..
T Consensus 192 ~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~ 271 (362)
T 2ra8_A 192 RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEM 271 (362)
T ss_dssp CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHH
T ss_pred CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHH
Confidence 46899999999988743333343 789999999963 222111 11122 35799999999999998554444
Q ss_pred hh---CCCCCceEeccCCcCCCC----CCccccccCCCcEEEeecccccccCCCCccccc-C-CcccccCCC
Q 007668 140 LG---NLSNLLNLDISSNSLSDY----IPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTK-F-SESSFFGNR 202 (594)
Q Consensus 140 ~~---~l~~L~~L~l~~N~l~~~----~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~-l-~~l~l~~N~ 202 (594)
+. .+++|++|+|+.|.|++. ++..+..+++|+.|+|++|.|+... ...+.+ + ..+++++|+
T Consensus 272 la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~--~~~l~~alg~~~~~~~~~ 341 (362)
T 2ra8_A 272 FLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEM--KKELQKSLPMKIDVSDSQ 341 (362)
T ss_dssp HHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHH--HHHHHHHCCSEEECCSBC
T ss_pred HHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHH--HHHHHHHcCCEEEecCCc
Confidence 43 578999999999999863 3445567899999999999886431 122332 2 346666665
No 418
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=98.01 E-value=3.7e-05 Score=77.31 Aligned_cols=138 Identities=21% Similarity=0.320 Sum_probs=79.1
Q ss_pred ceeeeecceEEEEEEecCCcEEEEEeecccchhhHHHHHHHHHHHhhCC-----CCeeeeee-e--EEeCCCceEEEEEc
Q 007668 313 HIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIK-----HRYLVNLR-G--YCNSPTSKLLIYDF 384 (594)
Q Consensus 313 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h~niv~l~-g--~~~~~~~~~lv~e~ 384 (594)
+.|+.|..+.||++...+| .+++|+.... ...+..|.+++..+. .|.++... | +....+..+++++|
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~ 112 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW 112 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence 4566678899999887655 4889988752 123344555555442 34443311 1 11235567899999
Q ss_pred cCCCchh--------------hhhhhcCC-------------CCCHHHH-------------------------------
Q 007668 385 LPGGSLD--------------EALHERSE-------------QLDWDAR------------------------------- 406 (594)
Q Consensus 385 ~~~gsL~--------------~~l~~~~~-------------~l~~~~~------------------------------- 406 (594)
++|..+. ..+|.... ...|...
T Consensus 113 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 192 (346)
T 2q83_A 113 IEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEI 192 (346)
T ss_dssp CCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred ecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHH
Confidence 9986543 11221100 0123211
Q ss_pred HHHHHHHHHHHHHhhh----------cCCCCeeeCCCCCCCeEecCCCcEEEeeccccc
Q 007668 407 LNIIMGAAKGLAYLHH----------DCSPRIIHRDIKSSNILLDGNLEARVSDFGLAK 455 (594)
Q Consensus 407 ~~i~~~ia~~L~~LH~----------~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~ 455 (594)
..+...+..++.+|++ .....++|+|+++.||+++.++.+.|+||+.+.
T Consensus 193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 193 DGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 0111223445666653 025689999999999999878899999999764
No 419
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.99 E-value=7.4e-06 Score=69.80 Aligned_cols=60 Identities=15% Similarity=0.209 Sum_probs=34.8
Q ss_pred eEeccCCcCC-CCCCccccccCCCcEEEeecccccccCCCC-cccccCCcccccCCCCCCCCcc
Q 007668 148 NLDISSNSLS-DYIPPSLGKLQRLITFNVSNNFLVGAIPSD-GVLTKFSESSFFGNRGLCGKQI 209 (594)
Q Consensus 148 ~L~l~~N~l~-~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~l~~l~~l~l~~N~~~c~~~~ 209 (594)
.++-+++.|+ ..+|..+. ++|+.|+|++|+|+.+++.. ..+++|+.|+|.+|||.|+|.+
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~CdC~l 73 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRCDCRL 73 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBCSGGG
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeeccCcc
Confidence 4555555554 11443221 24566666666666555544 4566667777788888888775
No 420
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.94 E-value=3.2e-05 Score=79.70 Aligned_cols=75 Identities=11% Similarity=-0.016 Sum_probs=48.6
Q ss_pred cceeeeecceEEEEEEec-CCcEEEEEeecccch-------hhHHHHHHHHHHHhhCCC--Ce-eeeeeeEEeCCCceEE
Q 007668 312 DHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNE-------GFDRFFERELEILGSIKH--RY-LVNLRGYCNSPTSKLL 380 (594)
Q Consensus 312 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~h--~n-iv~l~g~~~~~~~~~l 380 (594)
.+.||.|.++.||++... ++..++||....... .....+..|.+++..+.. +. +.+++.+ +....++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 467899999999999754 467899997653211 123456778888887742 33 3345543 3445689
Q ss_pred EEEccCCC
Q 007668 381 IYDFLPGG 388 (594)
Q Consensus 381 v~e~~~~g 388 (594)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999764
No 421
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.90 E-value=2.5e-06 Score=76.25 Aligned_cols=83 Identities=12% Similarity=0.115 Sum_probs=42.9
Q ss_pred cCCeeecccCccCCCCCCCcCCCCccceeeccccc-ccCCCChhhhCC----CCCceEeccCCc-CCCCCCccccccCCC
Q 007668 97 QLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNY-LSGSIPSELGNL----SNLLNLDISSNS-LSDYIPPSLGKLQRL 170 (594)
Q Consensus 97 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l----~~L~~L~l~~N~-l~~~~~~~~~~l~~L 170 (594)
+|+.|||+++.|+..--..+.++++|+.|+|++|. |+..--..+..+ ++|++|+|+++. |++.--..+.++++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 45555555555543322334556666666666653 443222233332 356666666653 554222345566666
Q ss_pred cEEEeeccc
Q 007668 171 ITFNVSNNF 179 (594)
Q Consensus 171 ~~l~l~~N~ 179 (594)
+.|+|+++.
T Consensus 142 ~~L~L~~c~ 150 (176)
T 3e4g_A 142 KYLFLSDLP 150 (176)
T ss_dssp CEEEEESCT
T ss_pred CEEECCCCC
Confidence 666666654
No 422
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.86 E-value=9e-05 Score=72.62 Aligned_cols=77 Identities=14% Similarity=0.196 Sum_probs=56.3
Q ss_pred CccceeeeecceEEEEEEecCCcEEEEEeecccchhhHHHHHHHHHHHhhCCC---CeeeeeeeEEeCCCceEEEEEccC
Q 007668 310 DDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIKH---RYLVNLRGYCNSPTSKLLIYDFLP 386 (594)
Q Consensus 310 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h---~niv~l~g~~~~~~~~~lv~e~~~ 386 (594)
...+.+|.|..+.||+....+|+.+++|+-..........|.+|++.|+.+.- -.+.+++++. ..++||||++
T Consensus 18 ~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~l~ 93 (288)
T 3f7w_A 18 AAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVD 93 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCC
T ss_pred EEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEeec
Confidence 34567899999999999999999999998765444444568899999888842 1234444432 3478999998
Q ss_pred CCch
Q 007668 387 GGSL 390 (594)
Q Consensus 387 ~gsL 390 (594)
.+..
T Consensus 94 ~~~~ 97 (288)
T 3f7w_A 94 ERPP 97 (288)
T ss_dssp CCCC
T ss_pred ccCC
Confidence 7653
No 423
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.82 E-value=0.00015 Score=71.66 Aligned_cols=137 Identities=16% Similarity=0.195 Sum_probs=92.0
Q ss_pred ccceeeeecceEEEEEEecCCcEEEEEeecccchhhHHHHHHHHHHHhhCC---CCeeeeeeeEEeCCCceEEEEEccCC
Q 007668 311 DDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIK---HRYLVNLRGYCNSPTSKLLIYDFLPG 387 (594)
Q Consensus 311 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~g~~~~~~~~~lv~e~~~~ 387 (594)
..+.|+.|....+|+... ++..+++|+.... ....+.+|++.|+.+. ...+.+++.++...+..++||||+++
T Consensus 40 ~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G 115 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNK 115 (312)
T ss_dssp EEEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCC
T ss_pred eeEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccC
Confidence 446789999999999876 4677888876542 2567888999888873 36677888888777889999999998
Q ss_pred Cchhh-----------hhhhcCC---------------------CCCHHHHH---HHHH----------------HHHHH
Q 007668 388 GSLDE-----------ALHERSE---------------------QLDWDARL---NIIM----------------GAAKG 416 (594)
Q Consensus 388 gsL~~-----------~l~~~~~---------------------~l~~~~~~---~i~~----------------~ia~~ 416 (594)
..+.. .+|.... .-+|.... ++.. .+.+-
T Consensus 116 ~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~ 195 (312)
T 3jr1_A 116 SKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQI 195 (312)
T ss_dssp CCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHH
T ss_pred CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHH
Confidence 76532 2232111 12454332 1111 11111
Q ss_pred -HHHhhh-cCCCCeeeCCCCCCCeEecCCCcEEEeecc
Q 007668 417 -LAYLHH-DCSPRIIHRDIKSSNILLDGNLEARVSDFG 452 (594)
Q Consensus 417 -L~~LH~-~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfg 452 (594)
...|.. ...+.++|+|+.+.|++++.++ +.|.|+.
T Consensus 196 l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 196 VADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 223321 1256899999999999999887 8899974
No 424
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.65 E-value=8.3e-06 Score=72.83 Aligned_cols=87 Identities=11% Similarity=0.072 Sum_probs=66.5
Q ss_pred CcEEEEEcccCCCCCCCCccccCcccCCeeecccCc-cCCCCCCCcCCC----Cccceeeccccc-ccCCCChhhhCCCC
Q 007668 72 KRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNN-FYGEIPSELGNC----TELQGLSLQSNY-LSGSIPSELGNLSN 145 (594)
Q Consensus 72 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l----~~L~~L~Ls~N~-l~~~~p~~~~~l~~ 145 (594)
-+|+.|||+++.|+..--..+.++++|+.|+|+++. |+..--..+..+ ++|++|+|++|. |+..--..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 479999999999885444567899999999999985 663222335554 479999999984 87544455788999
Q ss_pred CceEeccCCc-CCC
Q 007668 146 LLNLDISSNS-LSD 158 (594)
Q Consensus 146 L~~L~l~~N~-l~~ 158 (594)
|++|+|++.. +++
T Consensus 141 L~~L~L~~c~~Itd 154 (176)
T 3e4g_A 141 LKYLFLSDLPGVKE 154 (176)
T ss_dssp CCEEEEESCTTCCC
T ss_pred CCEEECCCCCCCCc
Confidence 9999999975 553
No 425
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=97.51 E-value=0.00064 Score=62.13 Aligned_cols=148 Identities=13% Similarity=0.100 Sum_probs=96.5
Q ss_pred CCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeecccccccccCCceeee
Q 007668 387 GGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITT 466 (594)
Q Consensus 387 ~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~~~~~~ 466 (594)
.-+|.+.|...+.++++++++.++.|.+.+|.-+-.. ... ..+=+.|..|++..+|.+.+.+ +.+.
T Consensus 32 ~vSL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~-~~~-~~~i~~~~~i~l~~dG~V~f~~-~~s~----------- 97 (229)
T 2yle_A 32 ALSLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARR-RQP-RHRVRSAAQIRVWRDGAVTLAP-AADD----------- 97 (229)
T ss_dssp EEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT-TCC-CCCCCSGGGEEEETTSCEEECC-C--------------
T ss_pred cccHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhc-ccC-CceecCCcceEEecCCceeccc-cccc-----------
Confidence 3489999998899999999999999999998776211 001 1233457999999999998774 1110
Q ss_pred eeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhcccccccccCCCCCCCCHH
Q 007668 467 IVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQSE 546 (594)
Q Consensus 467 ~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (594)
.....+.|||... ...+.+.=|||+|+++|.-+--..|-+... +
T Consensus 98 --~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~e~eE~---------------------------------e 141 (229)
T 2yle_A 98 --AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLKENEER---------------------------------E 141 (229)
T ss_dssp -----------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCCTTEEE---------------------------------C
T ss_pred --ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCCcccch---------------------------------h
Confidence 0123466888763 456788899999999999997555422110 1
Q ss_pred HHHHHHHHHHHcccC-------------------------CCCCCCCHHHHHHHHhcccCCCC
Q 007668 547 SLDALLAVATQCVSS-------------------------SPDDRPTMHRVVQILESEVMTPC 584 (594)
Q Consensus 547 ~~~~l~~l~~~cl~~-------------------------dP~~RPs~~ev~~~L~~~~~~~~ 584 (594)
.+..|-+|+..|... .+..|++.++|++..+..+..+.
T Consensus 142 LS~~LE~LL~~Mt~~~~d~~~~DeG~~~~~eg~~d~~~~~~~~~~~sl~~Vi~~C~~hl~~ps 204 (229)
T 2yle_A 142 LSPPLEQLIDHMANTVEADGSNDEGYEAAEEGLGDEDEKRKISAIRSYRDVMKLCAAHLPTES 204 (229)
T ss_dssp CCHHHHHHHHHHTTCCC--------------------CCSCCCCCCSHHHHHHHHHTTSSSGG
T ss_pred hCHHHHHHHHHHHhcccccccccccccccccccccccccccccCcCCHHHHHHHHHhhccCcc
Confidence 113344444444433 45789999999999998887653
No 426
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=97.49 E-value=0.00013 Score=75.10 Aligned_cols=112 Identities=13% Similarity=0.182 Sum_probs=75.1
Q ss_pred CCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhhCCCCCceEeccCCcCCCCCCccccc
Q 007668 87 PISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLDISSNSLSDYIPPSLGK 166 (594)
Q Consensus 87 ~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~ 166 (594)
+-...|.+.++|+.+.+.++..+ .....|.++++|+.+.+. +.++..-...|.++++|+.++|..| ++.+-..+|.+
T Consensus 256 i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~ 332 (394)
T 4gt6_A 256 IETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAG 332 (394)
T ss_dssp ECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT
T ss_pred cccceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhC
Confidence 33456777778888887766554 555667778888888875 4455344456777788888888654 55555667778
Q ss_pred cCCCcEEEeecccccccCCCC-cccccCCcccccCCC
Q 007668 167 LQRLITFNVSNNFLVGAIPSD-GVLTKFSESSFFGNR 202 (594)
Q Consensus 167 l~~L~~l~l~~N~l~~~~~~~-~~l~~l~~l~l~~N~ 202 (594)
+.+|+.+.|..+ ++.+.... ..+.+|+.+.+.+|.
T Consensus 333 C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~ 368 (394)
T 4gt6_A 333 CEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSR 368 (394)
T ss_dssp CTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCH
T ss_pred CCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCce
Confidence 888888887544 55444433 566777777777765
No 427
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.47 E-value=0.00056 Score=70.84 Aligned_cols=79 Identities=10% Similarity=0.057 Sum_probs=47.5
Q ss_pred CCCeeeCCCCCCCeEecCCCcEEEeecccccccccCCceeeeeeecccCccCccccccC---CCCccchhhhHHHHHHHH
Q 007668 425 SPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSG---RATEKTDVYSFGVLVLEV 501 (594)
Q Consensus 425 ~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Dv~s~G~vl~el 501 (594)
...++|+|+++.|||++.++ ++++||+.+..-.....-......-...|.+|+..... ......++......+|+.
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNL 309 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHH
Confidence 56899999999999998776 99999998875332110000000001345666654311 112234556777777777
Q ss_pred HhC
Q 007668 502 LSG 504 (594)
Q Consensus 502 ltg 504 (594)
+++
T Consensus 310 y~~ 312 (420)
T 2pyw_A 310 FNK 312 (420)
T ss_dssp HHH
T ss_pred HHH
Confidence 765
No 428
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.42 E-value=0.00017 Score=61.28 Aligned_cols=37 Identities=24% Similarity=0.241 Sum_probs=21.2
Q ss_pred CCceEeccCCcCCCCCCccccccCCCcEEEeeccccc
Q 007668 145 NLLNLDISSNSLSDYIPPSLGKLQRLITFNVSNNFLV 181 (594)
Q Consensus 145 ~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~ 181 (594)
+|++|+|++|+|+.+.+..|..+++|+.|+|++|.+.
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4555555555555544455555666666666666554
No 429
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.40 E-value=0.00046 Score=68.62 Aligned_cols=157 Identities=18% Similarity=0.178 Sum_probs=87.7
Q ss_pred CCCHHHHHHHhcCCCcc-----ceeeeecceEEEEEEecCCcEEEEEeecccchhhHHHHHHHHHHHhhCCCCe--eeee
Q 007668 296 PYSSKDIIKKLETLDDD-----HIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRY--LVNL 368 (594)
Q Consensus 296 ~~~~~~~~~~~~~~~~~-----~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l 368 (594)
.++.+++......|... +.|+.|....+|+....+| .+++|...... ....+..|+.++..+.... +.++
T Consensus 6 ~~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~~ 82 (322)
T 2ppq_A 6 DITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLP 82 (322)
T ss_dssp CCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCB
T ss_pred cCCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCcc
Confidence 35566776666666542 3466788899999887766 57888776521 1234556777776663211 2233
Q ss_pred eeE------EeCCCceEEEEEccCCCchhh--------------hhhhcCC----C----C---CHHHHHH---------
Q 007668 369 RGY------CNSPTSKLLIYDFLPGGSLDE--------------ALHERSE----Q----L---DWDARLN--------- 408 (594)
Q Consensus 369 ~g~------~~~~~~~~lv~e~~~~gsL~~--------------~l~~~~~----~----l---~~~~~~~--------- 408 (594)
+.. ....+..+++++|++|..+.. .+|.... . . .|.....
T Consensus 83 ~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 162 (322)
T 2ppq_A 83 LPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEV 162 (322)
T ss_dssp CCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGT
T ss_pred cCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhh
Confidence 321 112345689999998865421 1221100 0 1 1322111
Q ss_pred ---HHHHHHHHHHHhhhc----CCCCeeeCCCCCCCeEecCCCcEEEeeccccc
Q 007668 409 ---IIMGAAKGLAYLHHD----CSPRIIHRDIKSSNILLDGNLEARVSDFGLAK 455 (594)
Q Consensus 409 ---i~~~ia~~L~~LH~~----~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~ 455 (594)
+...+.+.+.++++. ...+++|+|+.+.||+++++..+.++||+.+.
T Consensus 163 ~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 163 EKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp STTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 001134445555432 13479999999999999987556899998765
No 430
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.38 E-value=1.4e-05 Score=72.73 Aligned_cols=62 Identities=13% Similarity=0.248 Sum_probs=27.2
Q ss_pred CcEEEEEcccC-CCCC----CCCccccCcccCCeeecccCccCC----CCCCCcCCCCccceeeccccccc
Q 007668 72 KRVITLSLTNH-KLSG----PISADLGKLDQLKFLNLHSNNFYG----EIPSELGNCTELQGLSLQSNYLS 133 (594)
Q Consensus 72 ~~l~~L~L~~n-~l~~----~~~~~~~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~ 133 (594)
..|++|+|++| +|.. .+.+.+..-+.|+.|+|++|+|.. .+...+..-+.|+.|+|++|.|.
T Consensus 41 ~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 41 TDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLT 111 (197)
T ss_dssp SSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCC
T ss_pred CCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCC
Confidence 34555555553 4431 122233334455555555555541 11122223344555555555554
No 431
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=97.33 E-value=0.00043 Score=70.62 Aligned_cols=125 Identities=14% Similarity=0.109 Sum_probs=83.6
Q ss_pred cEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhhCCCCCceEecc
Q 007668 73 RVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLDIS 152 (594)
Q Consensus 73 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 152 (594)
+++.+.+..+ ++.+....|.+..+|+.+.+..+ ++..-...|.++.+|+.+.+..+ ++..-...|.++++|+.+.+.
T Consensus 218 ~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~ 294 (379)
T 4h09_A 218 NLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMD 294 (379)
T ss_dssp SCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEEC
T ss_pred ccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceecccccccccccccccccc
Confidence 3444544433 33244456677778888888765 55355566778888888888654 443444567888888888888
Q ss_pred CCcCCCCCCccccccCCCcEEEeecccccccCCCC-cccccCCcccccCC
Q 007668 153 SNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSD-GVLTKFSESSFFGN 201 (594)
Q Consensus 153 ~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~l~~l~~l~l~~N 201 (594)
+|.++.+-...|.++.+|+.+.|..+ ++.+.... ..+.+|+.+.+..|
T Consensus 295 ~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~ 343 (379)
T 4h09_A 295 NSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS 343 (379)
T ss_dssp CTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT
T ss_pred ccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc
Confidence 88887766778888888888888654 65554443 56677777777544
No 432
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.30 E-value=0.00079 Score=66.23 Aligned_cols=74 Identities=9% Similarity=0.046 Sum_probs=44.4
Q ss_pred CCccceeeeecceEEEEEEecCCcEEEEEeecccchhhHHHHHHHHHHHhhCCCCee-eeeeeEEeCCCceEEEEEcc-C
Q 007668 309 LDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYL-VNLRGYCNSPTSKLLIYDFL-P 386 (594)
Q Consensus 309 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~g~~~~~~~~~lv~e~~-~ 386 (594)
+...+.|+.|....+|+. ..+++|+........ ....+|+.+++.+....+ .+++++. ...-++|+||+ +
T Consensus 20 ~~~i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~-~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i~~ 91 (301)
T 3dxq_A 20 YTGPLERLGGLTNLVFRA-----GDLCLRIPGKGTEEY-INRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYIAG 91 (301)
T ss_dssp CCSCEEEESCSSEEEEEE-----TTEEEEEECC----C-CCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECCTT
T ss_pred ccceeEcCCcccccccee-----eeEEEECCCCCccce-eCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeecCC
Confidence 333678999999999998 457888765432211 123457777766642222 3455443 33457899999 5
Q ss_pred CCch
Q 007668 387 GGSL 390 (594)
Q Consensus 387 ~gsL 390 (594)
+.++
T Consensus 92 g~~l 95 (301)
T 3dxq_A 92 AQTM 95 (301)
T ss_dssp CEEC
T ss_pred CccC
Confidence 5544
No 433
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=97.29 E-value=0.00043 Score=71.02 Aligned_cols=124 Identities=8% Similarity=0.095 Sum_probs=86.8
Q ss_pred CcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhhCCCCCceEec
Q 007668 72 KRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLDI 151 (594)
Q Consensus 72 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 151 (594)
.+|+.+.+.++..+ +-...|.++++|+.+.+. +.++......|.++++|+.++|..| ++..-...|.++++|+.+.|
T Consensus 265 ~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~i 341 (394)
T 4gt6_A 265 AYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAI 341 (394)
T ss_dssp SSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEE
T ss_pred ccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEE
Confidence 45667777665444 556688899999999996 4566455678999999999999865 66455677999999999999
Q ss_pred cCCcCCCCCCccccccCCCcEEEeecccccccCCCCcccccCCcccccCC
Q 007668 152 SSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGN 201 (594)
Q Consensus 152 ~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~l~~N 201 (594)
..| ++.+-..+|.++++|+.+++.+|.... .......+|+.+.+..|
T Consensus 342 p~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~--~~~~~~~~L~~i~i~~~ 388 (394)
T 4gt6_A 342 PSS-VTKIPESAFSNCTALNNIEYSGSRSQW--NAISTDSGLQNLPVAPG 388 (394)
T ss_dssp CTT-CCBCCGGGGTTCTTCCEEEESSCHHHH--HTCBCCCCC--------
T ss_pred Ccc-cCEEhHhHhhCCCCCCEEEECCceeeh--hhhhccCCCCEEEeCCC
Confidence 755 776667889999999999999886542 12234455666655444
No 434
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.16 E-value=0.0011 Score=68.83 Aligned_cols=72 Identities=17% Similarity=0.192 Sum_probs=48.6
Q ss_pred ceeeeecceEEEEEEecC--------CcEEEEEeecccchhhHHHHHHHHHHHhhCCCCee-eeeeeEEeCCCceEEEEE
Q 007668 313 HIIGSGGFGTVYKLAMDD--------GNVFALKRIDKLNEGFDRFFERELEILGSIKHRYL-VNLRGYCNSPTSKLLIYD 383 (594)
Q Consensus 313 ~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~g~~~~~~~~~lv~e 383 (594)
+.|+.|....+|++...+ +..+++|+.... .....+.+|..++..+...++ .++++.+.+ .+|+|
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~e 152 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEE 152 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEEC
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEEE
Confidence 568889999999998753 478888877432 111445578888888743333 556666542 38999
Q ss_pred ccCCCch
Q 007668 384 FLPGGSL 390 (594)
Q Consensus 384 ~~~~gsL 390 (594)
|+++.++
T Consensus 153 ~l~G~~l 159 (429)
T 1nw1_A 153 YIPSRPL 159 (429)
T ss_dssp CCCEEEC
T ss_pred EeCCccc
Confidence 9986444
No 435
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=97.15 E-value=0.00055 Score=70.22 Aligned_cols=84 Identities=11% Similarity=0.086 Sum_probs=52.5
Q ss_pred CcCCCCccceeecccccccCCCChhhhCCCCCceEeccCCcCCCCCCccccccCCCcEEEeecccccccCCCC-cccccC
Q 007668 115 ELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSD-GVLTKF 193 (594)
Q Consensus 115 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~l~~l 193 (594)
.|..+.+|+.+.+.++ ++..-...|.++++|+.++|.++ ++.+-..+|.++.+|+.+++..| ++.+.... ..+.+|
T Consensus 292 ~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L 368 (394)
T 4fs7_A 292 TFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINL 368 (394)
T ss_dssp TTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTC
T ss_pred cccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCC
Confidence 4566666777776554 44333455777777777777643 55555567777777777777665 55554443 556677
Q ss_pred CcccccCC
Q 007668 194 SESSFFGN 201 (594)
Q Consensus 194 ~~l~l~~N 201 (594)
+.+.+..|
T Consensus 369 ~~i~lp~~ 376 (394)
T 4fs7_A 369 KKVELPKR 376 (394)
T ss_dssp CEEEEEGG
T ss_pred CEEEECCC
Confidence 77766544
No 436
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.12 E-value=0.005 Score=61.13 Aligned_cols=156 Identities=12% Similarity=0.114 Sum_probs=88.5
Q ss_pred CCHHHHHHHhcCCCc-----cceeeeecceEEEEEEecCCcEEEEEeecccchhhHHHHHHHHHHHhhCCCC--eeeeee
Q 007668 297 YSSKDIIKKLETLDD-----DHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIKHR--YLVNLR 369 (594)
Q Consensus 297 ~~~~~~~~~~~~~~~-----~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~--niv~l~ 369 (594)
.+.+.+....+.|.. ...++ |....||++...+|+.+++|....... ....+..|..++..+... .+.+++
T Consensus 11 l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~-~~~~~~~E~~~~~~L~~~g~~vp~~~ 88 (328)
T 1zyl_A 11 LHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPERW-TADQILEEHQFALQLVNDEVPVAAPV 88 (328)
T ss_dssp CCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTTS-CHHHHHHHHHHHHHHHHTTCSBCCCC
T ss_pred CCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCCC-CHHHHHHHHHHHHHHHHcCCeeccee
Confidence 445566655555532 23466 888899998877787899998763211 234567788887776421 234444
Q ss_pred eE-----EeCCCceEEEEEccCCCchhh--------------hhhhc--------CCCCCHHHH----HHH---------
Q 007668 370 GY-----CNSPTSKLLIYDFLPGGSLDE--------------ALHER--------SEQLDWDAR----LNI--------- 409 (594)
Q Consensus 370 g~-----~~~~~~~~lv~e~~~~gsL~~--------------~l~~~--------~~~l~~~~~----~~i--------- 409 (594)
.. ....+..+++++|+++..+.. .+|.. ....++... ..+
T Consensus 89 ~~~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 168 (328)
T 1zyl_A 89 AFNGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPS 168 (328)
T ss_dssp CBTTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCT
T ss_pred ecCCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCH
Confidence 33 112344578999998765421 01210 011222211 001
Q ss_pred ------HHHHHHHHHHhhhc----CCCCeeeCCCCCCCeEecCCCcEEEeecccccc
Q 007668 410 ------IMGAAKGLAYLHHD----CSPRIIHRDIKSSNILLDGNLEARVSDFGLAKL 456 (594)
Q Consensus 410 ------~~~ia~~L~~LH~~----~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~ 456 (594)
...+...+..+... ....++|+|+++.||+++ + .+.++||+.+..
T Consensus 169 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 169 GLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp TTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 01111222222211 145689999999999999 4 899999987653
No 437
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.08 E-value=0.0031 Score=62.84 Aligned_cols=139 Identities=15% Similarity=0.120 Sum_probs=71.1
Q ss_pred ceeeeecceE-EEEEEecCCcEEEEEeecccchhhHHHHHHHHHHHhhCCC--CeeeeeeeEEeCCCceEEEEEccCCCc
Q 007668 313 HIIGSGGFGT-VYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIKH--RYLVNLRGYCNSPTSKLLIYDFLPGGS 389 (594)
Q Consensus 313 ~~lG~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~g~~~~~~~~~lv~e~~~~gs 389 (594)
+.|+.|.... +|+....++..+++|....... ..+..|+.++..+.. -.+.+++.+..+. . +++||++.+..
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~-g-~ll~e~l~~~~ 98 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEEHAR-G-LLLIEDLGDAL 98 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEETTT-T-EEEECCCCSCB
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeecCCC-C-EEEEeeCCCcc
Confidence 4566665554 6677654467777775543221 234456666666532 2344566554333 2 78999997766
Q ss_pred hhhhhhhc---------------------C----CCCCHHHHH-------HH-------------HHHHHHHHHHhhh--
Q 007668 390 LDEALHER---------------------S----EQLDWDARL-------NI-------------IMGAAKGLAYLHH-- 422 (594)
Q Consensus 390 L~~~l~~~---------------------~----~~l~~~~~~-------~i-------------~~~ia~~L~~LH~-- 422 (594)
+.+.+... . ..++..... .+ ...+...+..+.+
T Consensus 99 l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~ 178 (333)
T 3csv_A 99 FTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQ 178 (333)
T ss_dssp HHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence 65433210 0 112211110 00 0011122222211
Q ss_pred -cCCCCeeeCCCCCCCeEecCC----CcEEEeecccccc
Q 007668 423 -DCSPRIIHRDIKSSNILLDGN----LEARVSDFGLAKL 456 (594)
Q Consensus 423 -~~~~~ivH~Dlk~~NIll~~~----~~~~l~Dfgl~~~ 456 (594)
.....++|||+.+.||+++.+ +.+.|+||+.+..
T Consensus 179 ~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 179 LEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred ccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 114579999999999999874 6899999998764
No 438
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.06 E-value=0.0021 Score=65.24 Aligned_cols=139 Identities=14% Similarity=0.158 Sum_probs=82.4
Q ss_pred ceeeeecceEEEEEEecC--------CcEEEEEeecccchhhHHHHHHHHHHHhhCC-CCeeeeeeeEEeCCCceEEEEE
Q 007668 313 HIIGSGGFGTVYKLAMDD--------GNVFALKRIDKLNEGFDRFFERELEILGSIK-HRYLVNLRGYCNSPTSKLLIYD 383 (594)
Q Consensus 313 ~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~lv~e 383 (594)
+.+..|-...+|+....+ +..+++|+..... .....+.+|.++++.+. +.-..++++++.+ .+|+|
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~-~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e 130 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAIL-QGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQ 130 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCcc-chHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEE
Confidence 567778889999987652 4788888753322 22455668999888774 3223566666654 39999
Q ss_pred ccCCCchhhh-----------------hhhc----CCCCC--HHHHHHHHHHHHH-------------------HHHHhh
Q 007668 384 FLPGGSLDEA-----------------LHER----SEQLD--WDARLNIIMGAAK-------------------GLAYLH 421 (594)
Q Consensus 384 ~~~~gsL~~~-----------------l~~~----~~~l~--~~~~~~i~~~ia~-------------------~L~~LH 421 (594)
|++|..+... +|.- ..... |.++.++..++.. .+..|.
T Consensus 131 ~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~ 210 (379)
T 3feg_A 131 YIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLR 210 (379)
T ss_dssp CCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHH
T ss_pred EecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHH
Confidence 9987665421 1111 11122 4555555544422 123332
Q ss_pred h----c-CCCCeeeCCCCCCCeEecCC----CcEEEeecccccc
Q 007668 422 H----D-CSPRIIHRDIKSSNILLDGN----LEARVSDFGLAKL 456 (594)
Q Consensus 422 ~----~-~~~~ivH~Dlk~~NIll~~~----~~~~l~Dfgl~~~ 456 (594)
+ . ....++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 211 ~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 211 KLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 1 1 13478999999999999876 7899999987753
No 439
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=97.02 E-value=0.0012 Score=67.68 Aligned_cols=124 Identities=8% Similarity=-0.004 Sum_probs=71.2
Q ss_pred CcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhhCCCCCceEec
Q 007668 72 KRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLDI 151 (594)
Q Consensus 72 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 151 (594)
.+|+++.|.+ .++.+-..+|.++++|+.++|.+| ++..-...|.++++|+.+.+..+--. .-...|.++..+.....
T Consensus 71 ~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~l~~-i~~~aF~~~~~~~~~~~ 147 (394)
T 4fs7_A 71 RKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLMLKS-IGVEAFKGCDFKEITIP 147 (394)
T ss_dssp TTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTTCCE-ECTTTTTTCCCSEEECC
T ss_pred CCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCceee-ecceeeecccccccccC
Confidence 5788888864 466455567888888888888755 55344566788888888777655222 33344444433322222
Q ss_pred cCCcCCCCCCccccccCCCcEEEeecccccccCCCC-cccccCCcccccCC
Q 007668 152 SSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSD-GVLTKFSESSFFGN 201 (594)
Q Consensus 152 ~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~l~~l~~l~l~~N 201 (594)
.. +..+....|.++++|+.+.+.++. ..+.... ..+.+|+.+.+..|
T Consensus 148 ~~--~~~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~ 195 (394)
T 4fs7_A 148 EG--VTVIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN 195 (394)
T ss_dssp TT--CCEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT
T ss_pred cc--ccccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC
Confidence 22 122233556667777777765543 2233322 45566666666555
No 440
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=97.00 E-value=0.00087 Score=68.28 Aligned_cols=108 Identities=13% Similarity=0.118 Sum_probs=86.9
Q ss_pred CcEEEEEcccCCCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeecccccccCCCChhhhCCCCCceEec
Q 007668 72 KRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLDI 151 (594)
Q Consensus 72 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 151 (594)
..|+.+.+..+ ++.+-...|.+..+|+.+.+..+ +.......|.++++|+.+.+.+|.++..-...|.++++|+.+.|
T Consensus 240 ~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~l 317 (379)
T 4h09_A 240 KALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTL 317 (379)
T ss_dssp SSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEEC
T ss_pred ccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEc
Confidence 56788888765 66455678899999999999765 55355568999999999999999998555678999999999999
Q ss_pred cCCcCCCCCCccccccCCCcEEEeeccccccc
Q 007668 152 SSNSLSDYIPPSLGKLQRLITFNVSNNFLVGA 183 (594)
Q Consensus 152 ~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~ 183 (594)
..| ++.+-..+|.++++|+.+.+..| ++.+
T Consensus 318 p~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I 347 (379)
T 4h09_A 318 PTA-LKTIQVYAFKNCKALSTISYPKS-ITLI 347 (379)
T ss_dssp CTT-CCEECTTTTTTCTTCCCCCCCTT-CCEE
T ss_pred Ccc-ccEEHHHHhhCCCCCCEEEECCc-cCEE
Confidence 765 77666788999999999988654 4433
No 441
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.79 E-value=0.0028 Score=64.23 Aligned_cols=73 Identities=16% Similarity=0.154 Sum_probs=42.8
Q ss_pred ceeeeecceEEEEEEecC---------CcEEEEEeecccchhhHHHHHHHHHHHhhCCCCe-eeeeeeEEeCCCceEEEE
Q 007668 313 HIIGSGGFGTVYKLAMDD---------GNVFALKRIDKLNEGFDRFFERELEILGSIKHRY-LVNLRGYCNSPTSKLLIY 382 (594)
Q Consensus 313 ~~lG~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~g~~~~~~~~~lv~ 382 (594)
+.|+.|....+|+....+ +..+++|+........ .....|.+++..+...+ +.++++... -++|+
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~~-~~~~~E~~~l~~L~~~g~~P~~~~~~~----~~~v~ 113 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDEL-YNTISEFEVYKTMSKYKIAPQLLNTFN----GGRIE 113 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGGT-SCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccce-ecHHHHHHHHHHHHhcCCCCceEEecC----CcEEE
Confidence 467788889999987654 2678888765432211 12356777777774223 345555441 36899
Q ss_pred EccCCCch
Q 007668 383 DFLPGGSL 390 (594)
Q Consensus 383 e~~~~gsL 390 (594)
||+++..+
T Consensus 114 e~i~G~~l 121 (369)
T 3c5i_A 114 EWLYGDPL 121 (369)
T ss_dssp ECCCSEEC
T ss_pred EEecCCcC
Confidence 99987544
No 442
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.73 E-value=0.0086 Score=62.37 Aligned_cols=74 Identities=16% Similarity=0.148 Sum_probs=47.2
Q ss_pred cceeeeecceEEEEEEecC-CcEEEEEeecccchhhHHHHHHHHHHHhhCCCCee-eeeeeEEeCCCceEEEEEccCCCc
Q 007668 312 DHIIGSGGFGTVYKLAMDD-GNVFALKRIDKLNEGFDRFFERELEILGSIKHRYL-VNLRGYCNSPTSKLLIYDFLPGGS 389 (594)
Q Consensus 312 ~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~g~~~~~~~~~lv~e~~~~gs 389 (594)
.+.|+.|-...+|++...+ +..+++|+........ -...+|..++..+...++ .++++.+. + .+|+||+++.+
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~-idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~ 187 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEI-INREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYA 187 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSC-SCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEE
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhh-cCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCcc
Confidence 3578889999999998765 4778888764322111 112578888888864444 45666663 2 35999998755
Q ss_pred h
Q 007668 390 L 390 (594)
Q Consensus 390 L 390 (594)
+
T Consensus 188 l 188 (458)
T 2qg7_A 188 L 188 (458)
T ss_dssp C
T ss_pred C
Confidence 4
No 443
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.71 E-value=0.00029 Score=64.02 Aligned_cols=87 Identities=18% Similarity=0.191 Sum_probs=62.5
Q ss_pred ccCcccCCeeecccC-ccCC----CCCCCcCCCCccceeecccccccC----CCChhhhCCCCCceEeccCCcCCCC---
Q 007668 92 LGKLDQLKFLNLHSN-NFYG----EIPSELGNCTELQGLSLQSNYLSG----SIPSELGNLSNLLNLDISSNSLSDY--- 159 (594)
Q Consensus 92 ~~~l~~L~~L~L~~N-~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~l~~N~l~~~--- 159 (594)
+.+-+.|+.|+|++| +|.. .+-+.+..-+.|+.|+|++|+|.. .+...+..-+.|+.|+|++|.|.+.
T Consensus 37 l~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ 116 (197)
T 1pgv_A 37 REDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLA 116 (197)
T ss_dssp HTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHH
T ss_pred HhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHH
Confidence 344578999999986 7752 233456677899999999999983 2344555668899999999999742
Q ss_pred -CCccccccCCCcEEEeecc
Q 007668 160 -IPPSLGKLQRLITFNVSNN 178 (594)
Q Consensus 160 -~~~~~~~l~~L~~l~l~~N 178 (594)
+-..+..-+.|+.|+|++|
T Consensus 117 ala~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 117 RLLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHHHHTTTTCCCSEEECCCC
T ss_pred HHHHHHhhCCceeEEECCCC
Confidence 1234455567999999865
No 444
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.56 E-value=0.0072 Score=60.41 Aligned_cols=32 Identities=22% Similarity=0.335 Sum_probs=27.8
Q ss_pred CCCeeeCCCCCCCeEecCCCcEEEeecccccc
Q 007668 425 SPRIIHRDIKSSNILLDGNLEARVSDFGLAKL 456 (594)
Q Consensus 425 ~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~ 456 (594)
...++|+|+.+.||++++++.+.++||+.+..
T Consensus 205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp GCEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred CceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 35799999999999999888899999987654
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=96.13 E-value=0.027 Score=57.27 Aligned_cols=139 Identities=16% Similarity=0.189 Sum_probs=80.3
Q ss_pred ceeeeecceEEEEEEecC--------CcEEEEEeecccchh----------h--------HHHHHHHHHHHhhCC-CCee
Q 007668 313 HIIGSGGFGTVYKLAMDD--------GNVFALKRIDKLNEG----------F--------DRFFERELEILGSIK-HRYL 365 (594)
Q Consensus 313 ~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~----------~--------~~~~~~E~~~l~~l~-h~ni 365 (594)
+.|..|-...+|+....+ +..|.++..-...+. . ......|..+++.+. +.-.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 456778888999987754 367777765432211 0 112234888877774 3334
Q ss_pred eeeeeEEeCCCceEEEEEccCCCchhhh-----------------hhhc----CCCCC--HHHHHHHHHHHH--------
Q 007668 366 VNLRGYCNSPTSKLLIYDFLPGGSLDEA-----------------LHER----SEQLD--WDARLNIIMGAA-------- 414 (594)
Q Consensus 366 v~l~g~~~~~~~~~lv~e~~~~gsL~~~-----------------l~~~----~~~l~--~~~~~~i~~~ia-------- 414 (594)
.++++++.+ .+|+||+++-+|... +|.. ..... |..+.++..++.
T Consensus 138 Pkl~~~~~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 567776643 289999986554321 1111 11122 234444443321
Q ss_pred --------------HHHH----Hhhhc-CCCCeeeCCCCCCCeEecCC------CcEEEeeccccc
Q 007668 415 --------------KGLA----YLHHD-CSPRIIHRDIKSSNILLDGN------LEARVSDFGLAK 455 (594)
Q Consensus 415 --------------~~L~----~LH~~-~~~~ivH~Dlk~~NIll~~~------~~~~l~Dfgl~~ 455 (594)
.-+. +|... ....++|+|+.+.||+++.+ +.+.++||..+.
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 1122 22221 13478899999999999876 789999998775
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.87 E-value=0.086 Score=54.08 Aligned_cols=138 Identities=17% Similarity=0.185 Sum_probs=81.8
Q ss_pred ceeeeecceEEEEEEecC--------CcEEEEEeecccchhhHHHHHHHHHHHhhCC-CCeeeeeeeEEeCCCceEEEEE
Q 007668 313 HIIGSGGFGTVYKLAMDD--------GNVFALKRIDKLNEGFDRFFERELEILGSIK-HRYLVNLRGYCNSPTSKLLIYD 383 (594)
Q Consensus 313 ~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~lv~e 383 (594)
+.+..|-...+|+....+ +..+++++........ -...+|.++++.+. +.-..++++.+. -++|+|
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~-idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~I~e 150 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKF-YDSKVELDVFRYLSNINIAPNIIADFP----EGRIEE 150 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CC-CCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEEE
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchh-cCHHHHHHHHHHHHhcCCCCCEEEEcC----CCEEEE
Confidence 567788889999987763 5778888764432211 12356787777774 222345555432 378999
Q ss_pred ccCCCchhhh-----------------hhh--c---------CCC-CCHHHHHHHHHHHH-------------------H
Q 007668 384 FLPGGSLDEA-----------------LHE--R---------SEQ-LDWDARLNIIMGAA-------------------K 415 (594)
Q Consensus 384 ~~~~gsL~~~-----------------l~~--~---------~~~-l~~~~~~~i~~~ia-------------------~ 415 (594)
|+++..|... +|. . ... .-|.++.++..++- .
T Consensus 151 fI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~ 230 (424)
T 3mes_A 151 FIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYSKILE 230 (424)
T ss_dssp CCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHHHHHH
T ss_pred EeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHHHHHH
Confidence 9988764310 111 0 001 12444444433221 2
Q ss_pred HHHHhhh---------------------cCCCCeeeCCCCCCCeEecCCCcEEEeecccccc
Q 007668 416 GLAYLHH---------------------DCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKL 456 (594)
Q Consensus 416 ~L~~LH~---------------------~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~~ 456 (594)
.+.+|.+ .....++|+|+.+.||+ +.++.+.++||..+..
T Consensus 231 e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 231 EIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp HHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred HHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 2233321 11346899999999999 7888999999998763
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=91.46 E-value=0.26 Score=50.25 Aligned_cols=30 Identities=27% Similarity=0.390 Sum_probs=25.0
Q ss_pred CeeeCCCCCCCeEe------cCCCcEEEeecccccc
Q 007668 427 RIIHRDIKSSNILL------DGNLEARVSDFGLAKL 456 (594)
Q Consensus 427 ~ivH~Dlk~~NIll------~~~~~~~l~Dfgl~~~ 456 (594)
.++|+|+.+.||++ +++..+.++||.++..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 46799999999999 4566799999988763
No 448
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=87.26 E-value=0.3 Score=31.82 Aligned_cols=28 Identities=21% Similarity=0.240 Sum_probs=12.2
Q ss_pred eeehhhhhHHHHHHHHhhhhceeecccc
Q 007668 244 ISASATVGALLLVALMCFWGCFLYKKLG 271 (594)
Q Consensus 244 i~~~~~~~~~ll~~~~~~~~~~~~~~~~ 271 (594)
+++.++++++++++++..++++.++++.
T Consensus 13 IA~gVVgGv~~~~ii~~~~~~~~RRr~~ 40 (44)
T 2ks1_B 13 IATGMVGALLLLLVVALGIGLFMRRRHI 40 (44)
T ss_dssp STHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred EEeehhHHHHHHHHHHHHHHHHhhhhHh
Confidence 3344444455544444444334444333
No 449
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=86.65 E-value=2.3 Score=38.79 Aligned_cols=116 Identities=13% Similarity=0.088 Sum_probs=79.3
Q ss_pred CCCeeeeeeeEEeCCCceEEEEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHH-HhhhcCCCCeeeCCCCCCCeE
Q 007668 361 KHRYLVNLRGYCNSPTSKLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLA-YLHHDCSPRIIHRDIKSSNIL 439 (594)
Q Consensus 361 ~h~niv~l~g~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~-~LH~~~~~~ivH~Dlk~~NIl 439 (594)
.||++ -..+-.+++...+.|+.-+++.=...++ ..+...+++++.+|+.... +++ .-+|--+.|+|++
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~----~~~~~eKlrll~nl~~L~~~~~~-----~r~tf~l~P~NL~ 116 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR----KTTLLSRIRAAIHLVSKVKHHSA-----RRLIFIVCPENLM 116 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH----TSCHHHHHHHHHHHHHHHSSCCS-----SSEECCCCGGGEE
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH----hcCHHHHHHHHHHHHHHHHHhhh-----CceeEEEeCceEE
Confidence 67887 3444466777777777654544344443 3788899999999988777 666 4578889999999
Q ss_pred ecCCCcEEEeecccccccccCCceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCc
Q 007668 440 LDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDA 510 (594)
Q Consensus 440 l~~~~~~~l~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~ 510 (594)
++.++.+++.-.|+-..+ +|.- .++.-=.-.+=+++..++.++..|+.
T Consensus 117 f~~~~~p~i~hRGi~~~l------------------pP~e-----~~ee~fl~qyKali~all~~K~~Fe~ 164 (219)
T 4ano_A 117 FNRALEPFFLHVGVKESL------------------PPDE-----WDDERLLREVKATVLALTEGEYRFDE 164 (219)
T ss_dssp ECTTCCEEESCCEETTTB------------------SSCS-----CCHHHHHHHHHHHHHHHTTCSSCHHH
T ss_pred EeCCCcEEEEEcCCcccC------------------CCCC-----CCHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 999999999877754432 2221 11111233566788888888887654
No 450
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=85.61 E-value=1.7 Score=39.51 Aligned_cols=117 Identities=11% Similarity=0.135 Sum_probs=80.0
Q ss_pred CCCeeeeeeeEEeCCCceEEEEEccCCCchhhhhhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCCeEe
Q 007668 361 KHRYLVNLRGYCNSPTSKLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILL 440 (594)
Q Consensus 361 ~h~niv~l~g~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll 440 (594)
.||++++. .+-.+.+...+.|+.-+.+.=...+ ...+...+++++.+|+..-.+++ .=+|--+.|+|+++
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~i----k~~~~~eKlr~l~ni~~l~~~~~-----~r~tf~L~P~NL~f 112 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDNI----KSFTKNEKLRYLLNIKNLEEVNR-----TRYTFVLAPDELFF 112 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGGG----GGSCHHHHHHHHHHGGGGGGGGG-----SSEECCCSGGGEEE
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHHH----HhcCHHHHHHHHHHHHHHHHHhc-----CceEEEEecceEEE
Confidence 68888866 4555666655666644433222223 33788999999999999887777 34788899999999
Q ss_pred cCCCcEEEeecccccccccCCceeeeeeecccCccCccccccCCCCccchhhhHHHHHHHHHhCCCCCCc
Q 007668 441 DGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDA 510 (594)
Q Consensus 441 ~~~~~~~l~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~ 510 (594)
+.++.+++.-.|+...+.+ . ..++..=.-.+=+++..+++++..|+.
T Consensus 113 ~~~~~p~i~~RGik~~l~P------------------~-----~~~ee~fL~qyKAliiall~~K~~Fe~ 159 (215)
T 4ann_A 113 TRDGLPIAKTRGLQNVVDP------------------L-----PVSEAEFLTRYKALVICAFNEKQSFDA 159 (215)
T ss_dssp CTTSCEEESCCEETTTBSC------------------C-----CCCHHHHHHHHHHHHHHHHCTTCCHHH
T ss_pred cCCCCEEEEEccCccCCCC------------------C-----CCCHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 9999999987775433222 1 112222234567888999999988765
No 451
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=84.12 E-value=0.35 Score=31.45 Aligned_cols=28 Identities=21% Similarity=0.287 Sum_probs=12.1
Q ss_pred eeehhhhhHHHHHHHHhhhhceeecccc
Q 007668 244 ISASATVGALLLVALMCFWGCFLYKKLG 271 (594)
Q Consensus 244 i~~~~~~~~~ll~~~~~~~~~~~~~~~~ 271 (594)
+++.++++++++++++..++++.++|+.
T Consensus 12 IA~gVVgGv~~v~ii~~~~~~~~RRRr~ 39 (44)
T 2l2t_A 12 IAAGVIGGLFILVIVGLTFAVYVRRKSI 39 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred EEEeehHHHHHHHHHHHHHHHHhhhhhh
Confidence 3344444455544444443333433333
No 452
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=79.96 E-value=0.56 Score=30.43 Aligned_cols=25 Identities=36% Similarity=0.567 Sum_probs=10.2
Q ss_pred ehhhhhHHHHHHHHhhhhceeeccc
Q 007668 246 ASATVGALLLVALMCFWGCFLYKKL 270 (594)
Q Consensus 246 ~~~~~~~~ll~~~~~~~~~~~~~~~ 270 (594)
++.++|+++++++...+.++.+|++
T Consensus 15 a~~vVGvll~vi~~l~~~~~~RRR~ 39 (44)
T 2jwa_A 15 ISAVVGILLVVVLGVVFGILIKRRQ 39 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHhheehhh
Confidence 3344444444444333333444333
No 453
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=78.22 E-value=0.22 Score=51.78 Aligned_cols=59 Identities=7% Similarity=-0.053 Sum_probs=17.0
Q ss_pred ccceeeeecceEEEEEEecC-CcEEEE------Eeecccc--hhhHHHHHHHHHHHhhCCCCeeeeeeeEE
Q 007668 311 DDHIIGSGGFGTVYKLAMDD-GNVFAL------KRIDKLN--EGFDRFFERELEILGSIKHRYLVNLRGYC 372 (594)
Q Consensus 311 ~~~~lG~G~~g~Vy~~~~~~-~~~vav------K~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~ 372 (594)
..+.|| ||.||+|.+.. ..+||| |..+... ......+.+|..++..++|||+++..++.
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~ 213 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFK 213 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceE
Confidence 345676 99999998864 367888 6665422 22234678899999999999999988775
No 454
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=57.54 E-value=29 Score=27.02 Aligned_cols=46 Identities=15% Similarity=0.159 Sum_probs=22.4
Q ss_pred CCCCCCCccccCcccCCeeecccCccCCCCCCCcCCCCccceeeccc
Q 007668 83 KLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQS 129 (594)
Q Consensus 83 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 129 (594)
.++.+-...|.++++|+.+.|-.+ ++..-...|.++.+|+.+.+..
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 344333445555555555555543 2223344555555555555543
No 455
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=56.69 E-value=22 Score=27.67 Aligned_cols=46 Identities=15% Similarity=0.140 Sum_probs=23.8
Q ss_pred ccCCCCCCCcCCCCccceeecccccccCCCChhhhCCCCCceEeccC
Q 007668 107 NFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLDISS 153 (594)
Q Consensus 107 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~ 153 (594)
.++..-...|.++++|+.+.|..+ ++..-...|.++.+|+.+.+..
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 344344445666666666666544 3323344455556666555544
No 456
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=46.50 E-value=5.8 Score=25.24 Aligned_cols=12 Identities=33% Similarity=0.598 Sum_probs=5.3
Q ss_pred eehhhhhHHHHH
Q 007668 245 SASATVGALLLV 256 (594)
Q Consensus 245 ~~~~~~~~~ll~ 256 (594)
+.++++++++++
T Consensus 16 ~~~vv~Gv~ll~ 27 (41)
T 2k9y_A 16 IGGVAVGVVLLL 27 (41)
T ss_dssp HHHHHHHHHHHH
T ss_pred EeehhHHHHHHH
Confidence 334444444444
No 457
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=38.29 E-value=2.8e+02 Score=29.30 Aligned_cols=46 Identities=20% Similarity=0.193 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHH--HHHHhhhcCCCCeeeCCCCCCCeEecCCCcEEEeeccccc
Q 007668 403 WDARLNIIMGAAK--GLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAK 455 (594)
Q Consensus 403 ~~~~~~i~~~ia~--~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~~l~Dfgl~~ 455 (594)
+..+..++...|- .+.|+= || +|=.++|||++.+|++.=+|||...
T Consensus 454 ~~a~~nF~~S~A~ySvv~YIL-----Gi--gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 454 AEVMDTYVKSCAGYCVITYIL-----GV--GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-----TC--CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred HHHHHHHHHHHHHHhHhheee-----ec--cCCCCcceeEcCCCCEeeeehHHhh
Confidence 5566666666543 355555 33 5779999999999999999999874
No 458
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=32.23 E-value=1.6e+02 Score=28.59 Aligned_cols=134 Identities=14% Similarity=0.119 Sum_probs=70.2
Q ss_pred eeeeecceEEEEEEecCCcEEEEEeecccchhhHHHHHHHHHHHhhCCCCeeeeeeeE----------------------
Q 007668 314 IIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGY---------------------- 371 (594)
Q Consensus 314 ~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~---------------------- 371 (594)
..-.|.. -||.+.. ++..++||-.. ....+.+..++...-.+..|+..-+.-.
T Consensus 76 ~s~~Gst-gvff~~t-d~~~~VVK~s~---~l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~~~~~~~~~l~ 150 (342)
T 1cja_A 76 RSEKGTE-GLFFVET-ESGVFIVKRST---NIESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAAIDKSFRVIT 150 (342)
T ss_dssp ECCSTTS-CEEEEEE-SSCEEEEECCT---THHHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHHHCSSSCHHH
T ss_pred eccCCCC-CeEEEEe-CCCEEEEeCcH---HHHHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHHHhhhhhHHHH
Confidence 3344554 4554444 58889999552 2234445555555445566653222111
Q ss_pred EeCCCceEEEEEccCCCchhhhhhhc-CCCCCHHHHHHHHHHH--HHHHHHhhhcCCC-Ceee-CCCCCCCeEecCCCc-
Q 007668 372 CNSPTSKLLIYDFLPGGSLDEALHER-SEQLDWDARLNIIMGA--AKGLAYLHHDCSP-RIIH-RDIKSSNILLDGNLE- 445 (594)
Q Consensus 372 ~~~~~~~~lv~e~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~i--a~~L~~LH~~~~~-~ivH-~Dlk~~NIll~~~~~- 445 (594)
.......+++|+|.+|..|.+.-+.. ...+..+ .+.++ .-++.++..+..+ +.+. .--.+.|||++.++.
T Consensus 151 ~l~~~~~~l~meyv~G~~L~e~~~~~~~~~f~~~----~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~~ 226 (342)
T 1cja_A 151 TLANQANILLMELVRGITLNKLTTTSAPEVLTKS----TMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGAT 226 (342)
T ss_dssp HHTTCSEEEEEECCCEEESTTCCSSSHHHHSCHH----HHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTTC
T ss_pred HhhcccceehhhhcCCCccccchhhhhhhhcCHH----HHHhhchhheehhhhcCCccCcccccCCCChhheEEeCCCCe
Confidence 01122456999999876666543210 0112222 23332 2345555544322 2222 235789999986554
Q ss_pred EEEeecccccc
Q 007668 446 ARVSDFGLAKL 456 (594)
Q Consensus 446 ~~l~Dfgl~~~ 456 (594)
+.++|-+.+..
T Consensus 227 ~~~IDhn~af~ 237 (342)
T 1cja_A 227 VVPIDSKIIPL 237 (342)
T ss_dssp EEECSCCCCCC
T ss_pred EEEEcCCcccc
Confidence 88999988864
No 459
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=23.34 E-value=32 Score=23.33 Aligned_cols=22 Identities=41% Similarity=0.658 Sum_probs=10.3
Q ss_pred ceeeeehhhhhHHHHHHH-Hhhh
Q 007668 241 RLLISASATVGALLLVAL-MCFW 262 (594)
Q Consensus 241 ~~~i~~~~~~~~~ll~~~-~~~~ 262 (594)
.+++++++.+|.+++.++ +++|
T Consensus 9 ~WiIi~svl~GLLLL~Lii~~Lw 31 (54)
T 2l8s_A 9 LWVILLSAFAGLLLLMLLILALW 31 (54)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455555555544433 3444
No 460
>2fq3_A Transcription regulatory protein SWI3; four-helix bundle; 1.40A {Saccharomyces cerevisiae} SCOP: a.4.1.18
Probab=22.53 E-value=1e+02 Score=24.10 Aligned_cols=46 Identities=7% Similarity=0.035 Sum_probs=34.7
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 007668 533 REIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILES 578 (594)
Q Consensus 533 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~ 578 (594)
.+.++.+-+...++.-..+.+.|..++..+|.++.|+.++.+.|.+
T Consensus 34 PEfF~g~~~~ktpe~Yl~iRN~iI~~yr~nP~~yLT~t~~r~~l~g 79 (104)
T 2fq3_A 34 PEFFTNRIPSKTPEVYMRYRNFMVNSYRLNPNEYFSVTTARRNVSG 79 (104)
T ss_dssp GGGCCSSCTTSCHHHHHHHHHHHHHHHHHCTTSCCCHHHHHHHSCS
T ss_pred hHHhcCCCCCCCHHHHHHHHHHHHHHHHhCCceeeeHHHHHHHccc
Confidence 3444443333455666778999999999999999999999988743
Done!