Query 007669
Match_columns 594
No_of_seqs 157 out of 1324
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 07:33:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007669.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007669hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2cg9_A ATP-dependent molecular 100.0 9E-150 3E-154 1259.9 39.9 559 3-564 107-677 (677)
2 2o1u_A Endoplasmin; GRP94, HSP 100.0 2E-136 7E-141 1151.2 54.8 522 8-568 136-664 (666)
3 2ioq_A Chaperone protein HTPG; 100.0 8E-131 3E-135 1102.7 41.9 503 8-560 115-623 (624)
4 3hjc_A Heat shock protein 83-1 100.0 1E-124 4E-129 1009.9 41.2 417 151-568 11-427 (444)
5 3q6m_A Heat shock protein HSP 100.0 2E-123 7E-128 996.5 39.3 414 158-572 2-415 (448)
6 2cge_A ATP-dependent molecular 100.0 1E-119 4E-124 967.7 41.3 404 159-564 1-405 (405)
7 1y4s_A Chaperone protein HTPG; 100.0 3E-116 1E-120 974.1 31.2 438 8-485 115-558 (559)
8 1hk7_A Heat shock protein HSP8 100.0 3.1E-94 1.1E-98 732.4 23.7 288 159-448 1-288 (288)
9 2gq0_A Chaperone protein HTPG; 100.0 4.5E-92 1.6E-96 721.1 24.4 288 159-468 2-294 (303)
10 3pry_A Heat shock protein HSP 100.0 2.8E-90 9.7E-95 697.8 25.7 263 157-419 1-263 (268)
11 1usu_A Heat shock protein HSP8 100.0 2.4E-90 8E-95 696.5 23.4 257 157-413 1-257 (260)
12 1y6z_A Heat shock protein, put 100.0 2.1E-87 7.2E-92 678.8 21.8 258 157-414 1-263 (263)
13 3peh_A Endoplasmin homolog; st 100.0 4.5E-38 1.6E-42 320.4 8.5 149 7-157 132-281 (281)
14 1qy5_A Endoplasmin; GRP94, NEC 100.0 9.4E-34 3.2E-38 288.9 9.2 149 8-157 119-269 (269)
15 3ied_A Heat shock protein; HSP 100.0 5.9E-33 2E-37 277.6 10.9 102 3-105 164-271 (272)
16 3nmq_A Heat shock protein HSP 100.0 1.3E-32 4.5E-37 275.0 11.2 105 3-108 120-224 (239)
17 1sf8_A Chaperone protein HTPG; 100.0 5.2E-32 1.8E-36 245.8 11.9 115 436-560 11-125 (126)
18 3o0i_A HSP90AA1 protein; HSP90 99.9 6.2E-28 2.1E-32 243.5 11.2 108 7-115 145-252 (256)
19 3t0h_A Heat shock protein HSP 99.9 6.3E-27 2.1E-31 233.4 11.8 106 8-114 118-223 (228)
20 2gqp_A Endoplasmin; GRP94, HSP 99.9 1.5E-26 5.1E-31 232.2 11.4 99 8-107 123-221 (236)
21 1yc1_A HSP 86, heat shock prot 99.9 4.5E-25 1.5E-29 224.6 10.4 101 7-108 153-253 (264)
22 2wer_A ATP-dependent molecular 99.9 3E-24 1E-28 213.1 11.5 101 7-107 111-211 (220)
23 2ior_A Chaperone protein HTPG; 99.8 1.7E-20 5.8E-25 188.1 9.7 92 10-104 137-231 (235)
24 1b63_A MUTL; DNA mismatch repa 98.8 3.4E-09 1.2E-13 111.1 8.2 186 11-265 92-306 (333)
25 1h7s_A PMS1 protein homolog 2; 98.3 7.9E-07 2.7E-11 94.3 6.4 82 13-98 104-196 (365)
26 3h4l_A DNA mismatch repair pro 98.2 1.1E-06 3.7E-11 93.2 5.0 79 12-97 94-185 (367)
27 3na3_A DNA mismatch repair pro 97.7 0.00016 5.3E-09 76.1 10.5 76 12-96 97-187 (348)
28 1mu5_A Type II DNA topoisomera 95.4 0.01 3.4E-07 64.9 4.8 81 11-94 104-196 (471)
29 1kij_A DNA gyrase subunit B; t 95.1 0.013 4.5E-07 62.4 4.1 78 12-94 109-193 (390)
30 2zbk_B Type 2 DNA topoisomeras 94.7 0.019 6.5E-07 63.5 4.4 82 11-95 103-196 (530)
31 2q2e_B Type 2 DNA topoisomeras 91.5 0.05 1.7E-06 61.3 1.2 88 13-104 110-211 (621)
32 3fv5_A DNA topoisomerase 4 sub 88.8 0.33 1.1E-05 46.8 4.3 89 12-104 94-189 (201)
33 1s16_A Topoisomerase IV subuni 78.8 1.9 6.6E-05 45.7 5.2 89 13-104 109-203 (390)
34 4duh_A DNA gyrase subunit B; s 59.1 4.4 0.00015 39.5 2.5 87 12-104 112-206 (220)
35 4emv_A DNA topoisomerase IV, B 58.2 16 0.00054 35.7 6.3 89 12-105 116-213 (226)
36 1ei1_A DNA gyrase B, GYRB; ATP 55.7 11 0.00036 40.0 4.9 85 12-104 111-205 (391)
37 1zxm_A TOPO IIA ATPase, DNA to 52.9 11 0.00038 40.0 4.5 80 12-94 131-219 (400)
38 3cwv_A DNA gyrase, B subunit, 50.0 21 0.00073 37.3 6.1 84 16-104 99-193 (369)
39 3lnu_A Topoisomerase IV subuni 35.7 20 0.0007 38.0 3.2 87 12-104 127-222 (408)
40 3ttz_A DNA gyrase subunit B; p 33.2 30 0.001 32.9 3.7 73 26-104 99-179 (198)
41 3bma_A D-alanyl-lipoteichoic a 27.1 97 0.0033 32.8 6.7 150 243-398 106-306 (407)
No 1
>2cg9_A ATP-dependent molecular chaperone HSP82; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.7e-150 Score=1259.89 Aligned_cols=559 Identities=66% Similarity=1.051 Sum_probs=470.1
Q ss_pred cccCCCCcccccccccccceeccccCeeEEEeccCCCCeEEEEECCCCceEEEeCCCCCCCCcceEEEEEeccchhhccC
Q 007669 3 ALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLE 82 (594)
Q Consensus 3 ~l~~~~~~~lIGQFGvGFyS~FmVAdkV~V~Srs~~~~~~~W~s~g~g~y~i~~~~~~~~~~~GT~I~L~lk~d~~e~l~ 82 (594)
++++++|.++|||||||||||||||++|+|+||++++.+|+|+|+|+|+|+|.+++.+...+|||+|+||||+++.+||+
T Consensus 107 kl~~~~d~~~IGqFGvGFySaf~vadkV~V~Sk~~~~~~~~W~s~g~~~~ti~~~~~~~~~~~GT~I~L~Lk~d~~e~l~ 186 (677)
T 2cg9_A 107 ALSAGADVSMIGQFGVGFYSLFLVADRVQVISKSNDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKDDQLEYLE 186 (677)
T ss_dssp CCCSSCCCCCCCCTTCTTGGGGGTEEEEEEEEECTTSCEEEEEECSSSEEEEEECCSSCCCSSEEEEEEEECTTGGGGGC
T ss_pred hhhcccchhhcCCCCchhHHHhhcCcEEEEEEccCCCceEEEEEcCCceEEEeecCCCCCCCCCeEEEEEEcchhhcccc
Confidence 44444567899999999999999999999999999888999999999999999843234568999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCcceEEeeccccccccCCCCCC-----------CccccccCCccccchHHhhhccccccceeeec
Q 007669 83 ERRIKDLVKKHSEFISYPIYLWTEKTTEKEISDDEDD-----------EPKKEEEGDVEDVDEEKEKEGKKKKKIKEVSH 151 (594)
Q Consensus 83 ~~~i~~li~kYs~fi~~PI~l~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (594)
.++|++||+|||+||+|||+|+++++.+.++++++++ +.+++++++++++++++ ++++++++++++..
T Consensus 187 ~~~i~~lvkkys~fi~~PI~l~~~k~~~~~~~~~e~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~-~~~~~~k~~~~~~~ 265 (677)
T 2cg9_A 187 EKRIKEVIKRHSEFVAYPIQLVVTKEVEKEVPIPEEEKKDEEKKDEEKKDEDDKKPKLEEVDEEE-EKKPKTKKVKEEVQ 265 (677)
T ss_dssp HHHHHHHHHHHSTTCSSCEEECCCCCCCCC----------------------------------------------CCCC
T ss_pred HHHHHHHHHHHHhhCCCCeEEeeccccccCcCcchhhhccccccccccccccccccccccccchh-hhcccccccccccc
Confidence 9999999999999999999998655443333222110 00111122222222111 01234556666678
Q ss_pred eeeecccCCCCccCCCCCCCHHHHHHHHHHhhcCcCCCceeeeeeccccceeEEEEeecCCCCCCcccccccccceEEEe
Q 007669 152 EWQLINKQKPIWLRKPEEITKEEYASFYKSLTNDWEDHLAVKHFSVEGQLEFKAVLFVPKRAPFDLFDTRKKMNNIKLYV 231 (594)
Q Consensus 152 ~~~~vN~~~~iW~r~~~evt~eey~~Fyk~l~~~~~~Pl~~ih~~~eg~~~~~~llyiP~~~p~~~~~~~~~~~~i~LY~ 231 (594)
+|++||+++|||+|+|++||+|||.+|||+++++|++||+|+||++||+++|+||||||+++|+++|++.+.++||+|||
T Consensus 266 e~e~iN~~~plW~r~~~eit~eeY~~FYk~l~~d~~~pl~~~H~~veg~~~~~~lLyiP~~ap~d~~~~~~~~~~ikLYv 345 (677)
T 2cg9_A 266 EIEELNKTKPLWTRNPSDITQEEYNAFYKSISNDWEDPLYVKHFSVEGQLEFRAILFIPKRAPFDLFESKKKKNNIKLYV 345 (677)
T ss_dssp CBCCCCCCCCTTSSCGGGCCTTTHHHHHHHHTTCCSCCSEEEEEEECSSSCEEEEEEECSSCCC---------CCSEEEE
T ss_pred cceecccCCCCcccCcccCCHHHHHHHHHHhcCCCCCchheEEecccccceEEEEEEEcCCCchhhhhhhhccCCeEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999997555679999999
Q ss_pred eccccccccccccccccccceeeeeCCCCCCccchhhhcccHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHhhHh
Q 007669 232 RRVFIMDNCEELIPEYLGFIKGVVDSDDLPLNISREMLQQNKILKVIRKNLVKKCIEMFNEIAENKEDYNKFYDAFSKNL 311 (594)
Q Consensus 232 rrVfI~d~~~~lLP~wl~FvrGVVDS~dLpLNvSRE~LQ~~~~l~~I~~~i~kkvl~~L~~la~d~e~y~~f~~~~~~~l 311 (594)
|||||||+|++|||+||+||||||||+|||||||||+||+|++|++||+.|++||+++|.+|++|+++|++||++||.+|
T Consensus 346 ~rVfI~d~~~~llP~yL~FvkGVVDS~DLpLNvSRE~LQ~~~~lk~I~~~l~kkvl~~l~~la~~~e~y~~f~~~fg~~l 425 (677)
T 2cg9_A 346 RRVFITDEAEDLIPEWLSFVKGVVDSEDLPLNLSREMLQQNKIMKVIRKNIVKKLIEAFNEIAEDSEQFEKFYSAFSKNI 425 (677)
T ss_dssp TTEEEEECSTTTSCGGGTTCEEEEEESSCCCCBTTTBCCCHHHHHHHHHHHHHHHHHHHHHHHSCSHHHHHHHHHHHHHH
T ss_pred eeeEeecChhhhchHHHHHheeecccCCCCcccCHHHhccCHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccCChhhHHHHhchhcccccCCCCceecHHHHHHhhccCCceEEEEeCCcHHHHhcChhHHHHHHcCceEEeecCCc
Q 007669 312 KLGIHEDSQNRAKLADLLRYHSTKSSEEFTSLKDYVTRMKEGQKDIYYITGESKKAVENSPFLERLKKKGYEVLYMVDAI 391 (594)
Q Consensus 312 K~G~~eD~~~~e~l~~LLrf~ss~~~~~~~sL~eYv~rm~~~Q~~IYY~~~~~~~~~~~sp~le~~~~~g~eVL~l~dpi 391 (594)
|+|+++|+.||++|++||||+||.++++++||++|++||+++|+.|||++|+|++++++|||+|.|+++|||||||++||
T Consensus 426 K~G~~eD~~nr~~l~~llrf~ss~~~~~~~sL~eYv~rmke~Q~~IyY~t~~s~~~~~~sp~~E~~~~kg~EVl~l~~~i 505 (677)
T 2cg9_A 426 KLGVHEDTQNRAALAKLLRYNSTKSVDELTSLTDYVTRMPEHQKNIYYITGESLKAVEKSPFLDALKAKNFEVLFLTDPI 505 (677)
T ss_dssp HHHHHHCSSSHHHHHTTCCBEESSCTTSCBCSTTHHHHSCTTCCEEEEEECSCSTTTTTCGGGHHHHTTTCCEEEECSHH
T ss_pred hhhhccCHHHHHHHHhheEeeecCCCCceeeHHHHHHhccccCceEEEEeCCCHHHHHhCcHHHHHHhCCceEEEeCCch
Confidence 99999999999999999999999876689999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHhhhhccCceeEeccccCCCCCCccHHHHhhHHHhHHhHHHHHHHHHHHhCCceeEEEEeecCCCCCeEEEeCCC
Q 007669 392 DEYAVGQLKEYEGKKLVSATKEGLKLDDETEEEKKKKEEKKKSFENLCKTMKDILGDRVEKVVVSDRIVDSPCCLVTGEY 471 (594)
Q Consensus 392 DE~~l~~L~~~~~~~f~~V~~~~l~l~~~~~~~k~~~~~~~~e~~~L~~~lk~~L~~~V~~V~vs~rL~dsPa~lv~~e~ 471 (594)
||++|++|.+|+|++|++|+++ +++++ .+++++..++.++++++|++|||++|+++|.+|++|+||+++|||||++++
T Consensus 506 De~~~~~l~e~~gk~~~~v~k~-l~l~~-~e~~~~~~~~~~~~~~~L~~~~k~~L~~~v~~V~~s~rl~~sP~~lv~~~~ 583 (677)
T 2cg9_A 506 DEYAFTQLKEFEGKTLVDITKD-FELEE-TDEEKAEREKEIKEYEPLTKALKEILGDQVEKVVVSYKLLDAPAAIRTGQF 583 (677)
T ss_dssp HHHHHGGGSCBTTBEEECSCCC-CCSCS-STTSSTTHHHHHGGGHHHHHHHHHTTCSSCSCEECCSSCSSSCEEEECCTT
T ss_pred HHHHHHHHHHhCCceEEEeecc-ccccc-chhhhhhhhhhHHHHHHHHHHHHHhcCCcceEEEEeccCCCCCEEEEeCcc
Confidence 9999999999999999999999 88865 333344445567789999999999999999999999999999999999999
Q ss_pred cccHHHHHHHHHHhhcCCCcccccCCCceEEeCCCChHHHHHHHhhhcc-CCchhHHHHHHHHhHHHHHhCCCCCCCHHH
Q 007669 472 GWSANMERIMKAQALRDNSMSSYMSSKKTMEINPDNGIMEELRKRAEAD-KNDKSVKDLTMLLFETALLTSGFSLDDPNT 550 (594)
Q Consensus 472 g~s~~Merimkaq~~~~~~~~~~~~~k~~LEINp~HpLIk~L~~~~~~~-~~~e~~~~~~~~Lyd~AlL~~G~~l~d~~~ 550 (594)
|||++|+|||++|++.++.+.+++..+++|||||+||||++|..+...+ .+++.++++|++|||||||++|++++||+.
T Consensus 584 ~~s~~merimka~~~~d~~~~~~~~~k~~LeiNp~hpli~~L~~~~~~d~~~~~~~~~~~~~Lyd~All~~G~~l~dp~~ 663 (677)
T 2cg9_A 584 GWSANMERIMKAQALRDSSMSSYMSSKKTFEISPKSPIIKELKKRVDEGGAQDKTVKDLTKLLYETALLTSGFSLDEPTS 663 (677)
T ss_dssp SCCHHHHHHHTTCC-------------CEEEECTTCHHHHHHHHHHHTCCSSCSSSSTTHHHHHHHHHHHTTCCCSSTTH
T ss_pred cccHHHHHHHHHhhccccccccccccCceEEEcCCCHHHHHHHHhhhccccCHHHHHHHHHHHHHHHHHhCCCCccCHHH
Confidence 9999999999998866555555677899999999999999998876443 345668999999999999999999999999
Q ss_pred HHHHHHHHHHhcCC
Q 007669 551 FGSRIHRMLKLGLS 564 (594)
Q Consensus 551 f~~r~~~lL~~~l~ 564 (594)
|++|+|+||.++||
T Consensus 664 f~~ri~~ll~~~l~ 677 (677)
T 2cg9_A 664 FASRINRLISLGLN 677 (677)
T ss_dssp HHHHHHHTSSSSCC
T ss_pred HHHHHHHHHHHhcC
Confidence 99999999987664
No 2
>2o1u_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, AMP-PNP, GP96; HET: ANP; 2.40A {Canis lupus familiaris} PDB: 2o1v_A* 2o1w_A 2o1t_A
Probab=100.00 E-value=2e-136 Score=1151.24 Aligned_cols=522 Identities=52% Similarity=0.926 Sum_probs=462.5
Q ss_pred CCcccccccccccceeccccCeeEEEeccCCCCeEEEEECCCCceEEEeCCCCCCCCcceEEEEEeccchhhccCHHHHH
Q 007669 8 ADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIK 87 (594)
Q Consensus 8 ~~~~lIGQFGvGFyS~FmVAdkV~V~Srs~~~~~~~W~s~g~g~y~i~~~~~~~~~~~GT~I~L~lk~d~~e~l~~~~i~ 87 (594)
.+.++|||||||||||||||++|+|+||++++.+|+|+|+| |+|+|.++..+...++||+|+||||+++.+||+.++|+
T Consensus 136 ~d~~~IGqFGvGfySaf~vAdkV~V~Sr~~~~~~~~W~s~g-g~~ti~~~~~~~~~~~GT~I~L~Lk~d~~Efle~~~I~ 214 (666)
T 2o1u_A 136 STSELIGQFGVGFYSAFLVADKVIVTSKHNNDTQHIWESDS-NEFSVIADPRGNTLGRGTTITLVLKEEASDYLELDTIK 214 (666)
T ss_dssp ----------CTTGGGGGTEEEEEEEEECTTSCCEEEEESS-SCCEEEECTTCCSSSSEEEEEEEECTTTTTSSSTTHHH
T ss_pred cchhhccCCCcHHHhHHHhcCEEEEEEeeCCCceEEEEEeC-CeEEEEecccCCCCCCCeEEEEEEccchhhhccHHHHH
Confidence 46679999999999999999999999999887899999999 99999974322346899999999999999999999999
Q ss_pred HHHHHhcCCCCcceEEeeccccccccCCCCCCCccccccCCccccchHHhhhccccccceeeeceeeecccCCCCccCCC
Q 007669 88 DLVKKHSEFISYPIYLWTEKTTEKEISDDEDDEPKKEEEGDVEDVDEEKEKEGKKKKKIKEVSHEWQLINKQKPIWLRKP 167 (594)
Q Consensus 88 ~li~kYs~fi~~PI~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~iW~r~~ 167 (594)
+||+|||+||++||+++.+++.+ ++ ++..+|+.+|+.+|+|++++
T Consensus 215 ~ivkkys~fi~~PI~~~~~~~~~------------------------------~~-----~~~~~~~~iN~~~~lw~~~~ 259 (666)
T 2o1u_A 215 NLVKKYSQFINFPIYVWSSKTGG------------------------------GG-----KTVWDWELMNDIKPIWQRPS 259 (666)
T ss_dssp HHHHHHSTTCCSCEEEEECC------------------------------------------CCEEEECSCCSCTTTSCT
T ss_pred HHHHHHHhhCCCceEEecccccc------------------------------cc-----ccccceEEEecCccccccCc
Confidence 99999999999999998642100 00 11246899999999999999
Q ss_pred CCCCHHHHHHHHHHhhcCcCCCceeeeeeccccceeEEEEeecCCCCCCccccc--ccccceEEEeeccccccccccccc
Q 007669 168 EEITKEEYASFYKSLTNDWEDHLAVKHFSVEGQLEFKAVLFVPKRAPFDLFDTR--KKMNNIKLYVRRVFIMDNCEELIP 245 (594)
Q Consensus 168 ~evt~eey~~Fyk~l~~~~~~Pl~~ih~~~eg~~~~~~llyiP~~~p~~~~~~~--~~~~~i~LY~rrVfI~d~~~~lLP 245 (594)
+++++|+|.+||++++++|.+||+|+|+++||+++|+|+||+|..+|+++|... ..+++++||||||||+|+|++|||
T Consensus 260 ~~i~~eey~~fy~~~~~d~~~pl~~ih~~~eg~~~~~gll~iP~~~p~d~~~~~~~~~~~~i~LYVn~vfI~d~~~~llP 339 (666)
T 2o1u_A 260 KEVEDDEYKAFYKSFSKESDDPMAYIHFTAEGEVTFKSILFVPTSAPRGLFDEYGSKKSDYIKLYVRRVFITDDFHDMMP 339 (666)
T ss_dssp TTCCHHHHHHHHHHTTCTTSCCSEEEEEEECSSSCEEEEEEECSSCCC------------CEEEEETTEEEESCCCTTSC
T ss_pred ccccHHHHHHHHhhhccccccCeeEEEecccCcEEEEEEEEcCCCCchhhhhhccccccCCeEEEEcCeEeeCchhhhhH
Confidence 999999999999999999999999999999999999999999999999998742 347899999999999999999999
Q ss_pred cccccceeeeeCCCCCCccchhhhcccHHHHHHHHHHHHHHHHHHHHHhhCHHHHH-HHHHHHhhHhhccccCChhhHHH
Q 007669 246 EYLGFIKGVVDSDDLPLNISREMLQQNKILKVIRKNLVKKCIEMFNEIAENKEDYN-KFYDAFSKNLKLGIHEDSQNRAK 324 (594)
Q Consensus 246 ~wl~FvrGVVDS~dLpLNvSRE~LQ~~~~l~~I~~~i~kkvl~~L~~la~d~e~y~-~f~~~~~~~lK~G~~eD~~~~e~ 324 (594)
+||+||||||||+|||||||||+||+|++|++||+.|++||+++|.++++ ++|+ +||++||.+||+|+++|..||++
T Consensus 340 ~~l~FvkGvVDs~dLplNVSRE~LQ~~~~l~~I~~~l~kkv~~~l~~l~~--e~y~~~f~~~f~~~lK~G~~~D~~~~~~ 417 (666)
T 2o1u_A 340 KYLNFVKGVVDSDDLPLNVSRETLQQHKLLKVIRKKLVRKTLDMIKKIAD--EKYNDTFWKEFGTNIKLGVIEDHSNRTR 417 (666)
T ss_dssp GGGTTCEEEEEESSSCSSSCHHHHHTCHHHHHHHHHHHHHHHHHHHHSCH--HHHHHTHHHHHHHHHHHHHHHCGGGHHH
T ss_pred HHHHHeeeeeCHhhCCCcccchhhccCHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHhhhhccCHHHHHH
Confidence 99999999999999999999999999999999999999999999999998 9999 99999999999999999999999
Q ss_pred HhchhcccccCCCCceecHHHHHHhhccCCceEEEEeCCcHHHHhcChhHHHHHHcCceEEeecCCccHHHHHhhhhccC
Q 007669 325 LADLLRYHSTKSSEEFTSLKDYVTRMKEGQKDIYYITGESKKAVENSPFLERLKKKGYEVLYMVDAIDEYAVGQLKEYEG 404 (594)
Q Consensus 325 l~~LLrf~ss~~~~~~~sL~eYv~rm~~~Q~~IYY~~~~~~~~~~~sp~le~~~~~g~eVL~l~dpiDE~~l~~L~~~~~ 404 (594)
|++||||+||.++++++||+||++||+++|+.|||++|+|++++++|||+|.|+++|||||||++||||++|++|.+|+|
T Consensus 418 l~~ll~f~ss~~~~~~~sL~eYv~rmke~Q~~IyY~t~~~~~~~~~sp~~e~~~~kg~eVl~l~~~iDe~~~~~l~e~~g 497 (666)
T 2o1u_A 418 LAKLLRFQSSHHPSDITSLDQYVERMKEKQDKIYFMAGSSRKEAESSPFVERLLKKGYEVIYLTEPVDEYCIQALPEFDG 497 (666)
T ss_dssp HHTTCCEEETTSSSCEECHHHHHHHSCTTCCEEEEEECSSHHHHHTCGGGHHHHHTTCCCEEECSTHHHHHHHTCCCBTT
T ss_pred HHhheEeeecCCCCceeeHHHHHHhcccccceEEEEeCCCHHHHhhCcHHHHHHhCCceEEEeCCchHHHHHHHHHhcCC
Confidence 99999999998766799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeEeccccCCCCCCccHHHHhhHHHhHHhHHHHHHHHHHH-hCCceeEEEEeecCCCCCeEEEeCCCcccHHHHHHHHH
Q 007669 405 KKLVSATKEGLKLDDETEEEKKKKEEKKKSFENLCKTMKDI-LGDRVEKVVVSDRIVDSPCCLVTGEYGWSANMERIMKA 483 (594)
Q Consensus 405 ~~f~~V~~~~l~l~~~~~~~k~~~~~~~~e~~~L~~~lk~~-L~~~V~~V~vs~rL~dsPa~lv~~e~g~s~~Merimka 483 (594)
++|++|+++++++++ ++++++..++.++++++|++|||++ |+++|.+|++|+||+++|||||++++|||++|||||++
T Consensus 498 k~~~~v~~~~~~l~~-~~~~~~~~~~~~~~~~~l~~~~k~~~L~~~v~~V~~s~rl~~sP~~lv~~~~~~s~~m~r~~~~ 576 (666)
T 2o1u_A 498 KRFQNVAKEGVKFDE-SEKTKESREAIEKEFEPLLNWMKDKALKDKIEKAVVSQRLTESPCALVASQYGWSGNMERIMKA 576 (666)
T ss_dssp BEEEETTBSCCCCCC-CHHHHHHHHHHHHHSHHHHHHHHHTTTTTTEEEEEECSSCSSCSEEEEBCTTSCCHHHHHHHHH
T ss_pred CceEEeccccccccc-chhhhhhhhhhHHhHHHHHHHHHhccCCCceeEEEEeecCCCCCeEEEecCcccCHHHHHHHHH
Confidence 999999999999876 4555554556678899999999999 99999999999999999999999999999999999999
Q ss_pred Hhhc---CCCcccccCCCceEEeCCCChHHHHHHHhhhccCCchhHHHHHHHHhHHHHHhCCCCCCCHHHHHHHHHHHHH
Q 007669 484 QALR---DNSMSSYMSSKKTMEINPDNGIMEELRKRAEADKNDKSVKDLTMLLFETALLTSGFSLDDPNTFGSRIHRMLK 560 (594)
Q Consensus 484 q~~~---~~~~~~~~~~k~~LEINp~HpLIk~L~~~~~~~~~~e~~~~~~~~Lyd~AlL~~G~~l~d~~~f~~r~~~lL~ 560 (594)
|++. ++.+.+++..+++|||||+||||++|.++...+.+++.++++|++|||+|||++|++++||+.|++|+|+||.
T Consensus 577 ~~~~~~~~~~~~~~~~~k~~LeiNp~H~li~~l~~~~~~~~~~~~~~~~~~~l~d~All~~G~~~~dp~~f~~r~~~ll~ 656 (666)
T 2o1u_A 577 QAYQTGKDISTNYYASQKKTFEINPRHPLIKDMLRRVKEDEDDKTVSDLAVVLFETATLRSGYLLPDTKAYGDRIERMLR 656 (666)
T ss_dssp HHHHTSCCCCSCSSSSCCEEEEECTTSHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHTCCCSCHHHHHHHHHHHHH
T ss_pred hhhhcccCcccccccccCeeeEECCCCHHHHHHHHhhhcccchHHHHHHHHHHHHHHHHhCCCCcccHHHHHHHHHHHHH
Confidence 9872 3333456778999999999999999988765555567899999999999999999999999999999999999
Q ss_pred hcCCCCcc
Q 007669 561 LGLSIDEE 568 (594)
Q Consensus 561 ~~l~~~~~ 568 (594)
++|+++++
T Consensus 657 ~~l~~~~~ 664 (666)
T 2o1u_A 657 LSLNIDPD 664 (666)
T ss_dssp TTSCC---
T ss_pred HhcCCCcc
Confidence 99998765
No 3
>2ioq_A Chaperone protein HTPG; heat shock protein, HSP90; 3.50A {Escherichia coli} PDB: 2iop_A
Probab=100.00 E-value=8.2e-131 Score=1102.71 Aligned_cols=503 Identities=38% Similarity=0.694 Sum_probs=441.8
Q ss_pred CCcccccccccccceeccccCeeEEEeccCC---CCeEEEEECCCCceEEEeCCCCCCCCcceEEEEEeccchhhccCHH
Q 007669 8 ADVSMIGQFGVGFYSAYLVAERVVVTTKHND---DEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEER 84 (594)
Q Consensus 8 ~~~~lIGQFGvGFyS~FmVAdkV~V~Srs~~---~~~~~W~s~g~g~y~i~~~~~~~~~~~GT~I~L~lk~d~~e~l~~~ 84 (594)
.+.++||||||||||||||||+|+|+||+++ +.+|+|+|+|+|.|+|.+ . ...++||+|+||||+++.+||+.+
T Consensus 115 ~~~~~iG~fGvGfyS~f~VadkV~V~Sr~~~~~~~~~~~w~s~g~~~~~i~~-~--~~~~~GT~I~L~Lk~d~~Efl~~~ 191 (624)
T 2ioq_A 115 KDSQLIGQFGVGFYSAFIVADKVTVRTRAAGEKPENGVFWESAGEGEYTVAD-I--TKEDRGTEITLHLREGEDEFLDDW 191 (624)
T ss_dssp CCTTHHHHHHHHHHHHHHHEEEEEEEEECTTSCGGGEEEEEECSSSCCEEEE-E--CCSSSEEEEEEEECTTCGGGGCHH
T ss_pred ccccccCCCCccHHHHHhcCCeEEEEECCCCCCCCeeEEEEEeCCCeEEEEE-C--CCCCCCeEEEEEEcchhhhcchHH
Confidence 3567999999999999999999999999976 679999999999999987 3 235899999999999999999999
Q ss_pred HHHHHHHHhcCCCCcceEEeeccccccccCCCCCCCccccccCCccccchHHhhhccccccceeeeceeeecccCCCCcc
Q 007669 85 RIKDLVKKHSEFISYPIYLWTEKTTEKEISDDEDDEPKKEEEGDVEDVDEEKEKEGKKKKKIKEVSHEWQLINKQKPIWL 164 (594)
Q Consensus 85 ~i~~li~kYs~fi~~PI~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~iW~ 164 (594)
+|++||+|||+||++||+++.+ +. ++ ++ + ..+|+.+|+.+|+|+
T Consensus 192 ~i~~ivkkys~fi~~PI~~~~~---e~---~~------------------------~~-----~-~~~~~~in~~~~lw~ 235 (624)
T 2ioq_A 192 RVRSIISKYSDHIALPVEIEKR---EE---KD------------------------GE-----T-VISWEKINKAQALWT 235 (624)
T ss_dssp HHHHHHHHHHTTCSSCEEEEEE---EE---CS------------------------SC-----E-EEEEEECCCCSCTTT
T ss_pred HHHHHHHHHhccCCCceEEeec---cc---cc------------------------cc-----c-ccceEEEeCCccceE
Confidence 9999999999999999999741 00 00 00 0 246899999999999
Q ss_pred CCCCCCCHHHHHHHHHHhhcCcCCCceeeeeeccccceeEEEEeecCCCCCCcccccccccceEEEeecccccccccccc
Q 007669 165 RKPEEITKEEYASFYKSLTNDWEDHLAVKHFSVEGQLEFKAVLFVPKRAPFDLFDTRKKMNNIKLYVRRVFIMDNCEELI 244 (594)
Q Consensus 165 r~~~evt~eey~~Fyk~l~~~~~~Pl~~ih~~~eg~~~~~~llyiP~~~p~~~~~~~~~~~~i~LY~rrVfI~d~~~~lL 244 (594)
++++++++++|.+||++++++|.+||+|+|++++|+++|+|+||+|..+|+++|.. ..+++++||||||||+|+|++||
T Consensus 236 ~~~~~i~~e~y~~fy~~~~~d~~~~l~~ih~~~eg~~~~~gll~~P~~~p~~~~~r-~~~~~i~lyvn~v~I~d~~~~ll 314 (624)
T 2ioq_A 236 RNKSEITDEEYKEFYKHIAHDFNDPLTWSHNRVEGKQEYTSLLYIPSQAPWDMWNR-DHKHGLKLYVQRVFIMDDAEQFM 314 (624)
T ss_dssp SCTTTCCHHHHHHHHHHHHTCCSCCSCCEEEEEESSSCEEEEEECCSSCCGGGSSS-SCCCCEEEEESSCEEEEEECSSS
T ss_pred ecCccchHHHHHHHHHhhccchhcCeEEEEecccceEEEEEEEEeCCcCccchhhh-cccCCeEEEECCEEeecchhccc
Confidence 99999999999999999999999999999999999999999999999999998863 35789999999999999999999
Q ss_pred ccccccceeeeeCCCCCCccchhhhcccHHHHHHHHHHHHHHHHHHHHHhh-CHHHHHHHHHHHhhHhhccccCChhhHH
Q 007669 245 PEYLGFIKGVVDSDDLPLNISREMLQQNKILKVIRKNLVKKCIEMFNEIAE-NKEDYNKFYDAFSKNLKLGIHEDSQNRA 323 (594)
Q Consensus 245 P~wl~FvrGVVDS~dLpLNvSRE~LQ~~~~l~~I~~~i~kkvl~~L~~la~-d~e~y~~f~~~~~~~lK~G~~eD~~~~e 323 (594)
|+||+||+|||||+|||||||||+||+|++|++||+.|++||+++|.++++ ||++|++||++||.+||+|+++|+.||+
T Consensus 315 P~~l~fv~gvVDs~dl~lNVSRE~LQ~~~~l~~I~~~l~kkv~~~l~~l~~~d~e~y~~f~~~f~~~lK~G~~~D~~~~~ 394 (624)
T 2ioq_A 315 PNYLRFVRGLIDSSDLPLNVSREILQDSTVTRNLRNALTKRVLQMLEKLAKDDAEKYQTFWQQFGLVLKEGPAEDFANQE 394 (624)
T ss_dssp CTTSTTCEEEEEESSSCTTCCHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTHHHHCCTTHH
T ss_pred hhhhhhEEEEECHhhCCCccCchhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhHHhhhhhccCHHHHH
Confidence 999999999999999999999999999999999999999999999999998 9999999999999999999999999999
Q ss_pred HHhchhcccccCCCC--ceecHHHHHHhhccCCceEEEEeCCcHHHHhcChhHHHHHHcCceEEeecCCccHHHHHhhhh
Q 007669 324 KLADLLRYHSTKSSE--EFTSLKDYVTRMKEGQKDIYYITGESKKAVENSPFLERLKKKGYEVLYMVDAIDEYAVGQLKE 401 (594)
Q Consensus 324 ~l~~LLrf~ss~~~~--~~~sL~eYv~rm~~~Q~~IYY~~~~~~~~~~~sp~le~~~~~g~eVL~l~dpiDE~~l~~L~~ 401 (594)
+|++||||+||.+++ +++||+||++||+++|+.|||++|++++++++|||+|.|+++|||||||++||||+++++|.+
T Consensus 395 ~l~~ll~f~ss~~~~~~~~~sL~eY~~rmke~q~~IyY~t~~~~~~~~~sp~~e~~~~kg~eVl~~~~~iDe~~~~~l~~ 474 (624)
T 2ioq_A 395 AIAKLLRFASTHTDSSAQTVSLEDYVSRMKEGQEKIYYITADSYAAAKSSPHLELLRKKGIEVLLLSDRIDEWMMNYLTE 474 (624)
T ss_dssp HHHHHCCBEETTSSCSCCCBCHHHHHTTCCTTCCSEEEEECSSHHHHHHCHHHHHHHHHTCCCEEECSSTHHHHTTTCCE
T ss_pred HHHHheEeeecCCCcCCCeeeHHHHHHhccccCceEEEEeCCCHHHHhhChHHHHHHhCCceEEEecCchHHHHHHHHHh
Confidence 999999999998653 799999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCceeEeccccCCCCCCccHHHHhhHHHhHHhHHHHHHHHHHHhCCceeEEEEeecCCCCCeEEEeCCCcccHHHHHHH
Q 007669 402 YEGKKLVSATKEGLKLDDETEEEKKKKEEKKKSFENLCKTMKDILGDRVEKVVVSDRIVDSPCCLVTGEYGWSANMERIM 481 (594)
Q Consensus 402 ~~~~~f~~V~~~~l~l~~~~~~~k~~~~~~~~e~~~L~~~lk~~L~~~V~~V~vs~rL~dsPa~lv~~e~g~s~~Merim 481 (594)
|+|++|++|+++++++++..+++++..++.++++++|++|||++|+++|++|++|+||+++|||+|++++||+++|+|||
T Consensus 475 ~~~k~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~k~~L~~~v~~V~~s~rl~~sP~~lv~~~~~~~~~m~r~m 554 (624)
T 2ioq_A 475 FDGKPFQSVSKVDESLEKLADEVDESAKEAEKALTPFIDRVKALLGERVKDVRLTHRLTDTPAIVSTDADEMSTQMAKLF 554 (624)
T ss_dssp ETTEEEEETTSCSTTTTTCC-------HHHHHHHHHHHHHHHHHSSSSSSEEEECCCCSSCCEEEECCC-----------
T ss_pred cCCceEEEeecccccccccchhhhhhhhHhHHHHHHHHHHHHHhhcCCceEEEEeecCCCCcEEEEecCcCcCHHHHHHH
Confidence 99999999999999886422333333345567899999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCcccccCCCceEEeCCCChHHHHHHHhhhccCCchhHHHHHHHHhHHHHHhCCCCCCCHHHHHHHHHHHHH
Q 007669 482 KAQALRDNSMSSYMSSKKTMEINPDNGIMEELRKRAEADKNDKSVKDLTMLLFETALLTSGFSLDDPNTFGSRIHRMLK 560 (594)
Q Consensus 482 kaq~~~~~~~~~~~~~k~~LEINp~HpLIk~L~~~~~~~~~~e~~~~~~~~Lyd~AlL~~G~~l~d~~~f~~r~~~lL~ 560 (594)
++|++ .++..+++|||||+||||++|... . +++.++++|++|||||||++|++++||+.|++|+|+||.
T Consensus 555 ~~~~~------~~~~~~~~LeiN~~hpli~~L~~~--~--~~~~~~~~~~~L~d~All~~g~~l~dp~~f~~r~~~~l~ 623 (624)
T 2ioq_A 555 AAAGQ------KVPEVKYIFELNPDHVLVKRAADT--E--DEAKFSEWVELLLDQALLAERGTLEDPNLFIRRMNQLLV 623 (624)
T ss_dssp ----------------CCEEEECTTCHHHHTTTSC--C--CHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHHHHHHH
T ss_pred HHhhh------cccccCceEEECCCCHHHHHHHhh--c--CHHHHHHHHHHHHHHHHHhCCCCccCHHHHHHHHHHHhh
Confidence 99864 234578999999999999999652 1 356799999999999999999999999999999999995
No 4
>3hjc_A Heat shock protein 83-1; sleeping sickness, structura genomics, stress response protein, chaperone, structural GE consortium, SGC; 2.50A {Leishmania major}
Probab=100.00 E-value=1.3e-124 Score=1009.90 Aligned_cols=417 Identities=65% Similarity=1.111 Sum_probs=371.1
Q ss_pred ceeeecccCCCCccCCCCCCCHHHHHHHHHHhhcCcCCCceeeeeeccccceeEEEEeecCCCCCCcccccccccceEEE
Q 007669 151 HEWQLINKQKPIWLRKPEEITKEEYASFYKSLTNDWEDHLAVKHFSVEGQLEFKAVLFVPKRAPFDLFDTRKKMNNIKLY 230 (594)
Q Consensus 151 ~~~~~vN~~~~iW~r~~~evt~eey~~Fyk~l~~~~~~Pl~~ih~~~eg~~~~~~llyiP~~~p~~~~~~~~~~~~i~LY 230 (594)
++|++||+++|||+|+|++||+|||.+|||+++++|++||+|+||++||+++|+||||||+.+|+++|+....++||+||
T Consensus 11 ~~~e~iN~~~plW~r~~~eit~EeY~eFYk~l~~d~~dPL~~iH~~veg~~~~~~lLyiP~~ap~dl~~~~~~~~~ikLY 90 (444)
T 3hjc_A 11 RENLYFQGHKPLWTRDPKDVTKEEYAAFYKAISNDWEDPAATKHFSVEGQLEFRSIMFVPKRAPFDMFEPNKKRNNIKLY 90 (444)
T ss_dssp --------CCCGGGSCGGGCCHHHHHHHHHHTSSCCSCCSEEEEEEECSSSCEEEEEEECSSCCC----CCCCCCSEEEE
T ss_pred CCceeccCCCCCCCCCcccCCHHHHHHHHHHhcCCccCCceeEEEEecccceeeEEEecCCCCCcchhhhhhhcCCeeEE
Confidence 56899999999999999999999999999999999999999999999999999999999999999999754567999999
Q ss_pred eeccccccccccccccccccceeeeeCCCCCCccchhhhcccHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHhhH
Q 007669 231 VRRVFIMDNCEELIPEYLGFIKGVVDSDDLPLNISREMLQQNKILKVIRKNLVKKCIEMFNEIAENKEDYNKFYDAFSKN 310 (594)
Q Consensus 231 ~rrVfI~d~~~~lLP~wl~FvrGVVDS~dLpLNvSRE~LQ~~~~l~~I~~~i~kkvl~~L~~la~d~e~y~~f~~~~~~~ 310 (594)
||||||||+|++|||+||+||||||||+|||||||||+||+|++|++||+.|++||+++|.++++||++|++||++||.+
T Consensus 91 v~rVfI~D~~~ellP~yL~FvkGVVDS~DLPLNVSRE~LQ~~~~lk~I~k~i~kKvl~~L~~la~d~e~Y~kFw~~fg~~ 170 (444)
T 3hjc_A 91 VRRVFIMDNCEDLCPDWLGFVKGVVDSEDLPLNISRENLQQNKILKVIRKNIVKKCLEMFDEVAENKEDYKQFYEQFGKN 170 (444)
T ss_dssp ETTEEEESCCGGGSCGGGTTCEEEEEESSCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHHHH
T ss_pred EeeeEeecchhhhchHHHhhheEEeccCCCCccccHHHhccCHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccccCChhhHHHHhchhcccccCCCCceecHHHHHHhhccCCceEEEEeCCcHHHHhcChhHHHHHHcCceEEeecCC
Q 007669 311 LKLGIHEDSQNRAKLADLLRYHSTKSSEEFTSLKDYVTRMKEGQKDIYYITGESKKAVENSPFLERLKKKGYEVLYMVDA 390 (594)
Q Consensus 311 lK~G~~eD~~~~e~l~~LLrf~ss~~~~~~~sL~eYv~rm~~~Q~~IYY~~~~~~~~~~~sp~le~~~~~g~eVL~l~dp 390 (594)
||+|+++|+.||++|++||||+||.++++++||+||++||+++|+.|||++|+|++++++|||+|.|+++|||||||++|
T Consensus 171 lK~G~~eD~~~~~~l~~lLrF~ss~~~~~~~SL~eYv~rmke~Qk~IYYitg~s~~~~~~sp~lE~~k~kG~EVL~l~d~ 250 (444)
T 3hjc_A 171 IKLGIHEDTANRKKLMELLRFYSTESGEEMTTLKDYVTRMKAGQKSIYYITGDSKKKLETSPFIEQARRRGLEVLFMTEP 250 (444)
T ss_dssp HHHHHTTCGGGHHHHHHHCCBCBTTTTTSCBCHHHHHHTCCTTCCEEEEEECSCHHHHHTCGGGHHHHHHTCCEEEECSH
T ss_pred HhccccccHHHHHHHHHheEeeeecCCCCcCcHHHHHHhccccCceEEEEeCCCHHHHHhChHHHHHHhCCcEEEEeCCc
Confidence 99999999999999999999999987778999999999999999999999999999999999999999999999999999
Q ss_pred ccHHHHHhhhhccCceeEeccccCCCCCCccHHHHhhHHHhHHhHHHHHHHHHHHhCCceeEEEEeecCCCCCeEEEeCC
Q 007669 391 IDEYAVGQLKEYEGKKLVSATKEGLKLDDETEEEKKKKEEKKKSFENLCKTMKDILGDRVEKVVVSDRIVDSPCCLVTGE 470 (594)
Q Consensus 391 iDE~~l~~L~~~~~~~f~~V~~~~l~l~~~~~~~k~~~~~~~~e~~~L~~~lk~~L~~~V~~V~vs~rL~dsPa~lv~~e 470 (594)
|||+++++|++|+|++|++|+++++++++ .+++++..++.++++++|++|+|++|+++|++|++|+||+++|||||+++
T Consensus 251 iDe~~i~~L~e~~gk~f~sV~k~~l~l~~-~eeek~~~ee~~~~~~~L~~~~K~~L~~kV~~V~vS~RL~~sP~~lv~~e 329 (444)
T 3hjc_A 251 IDEYVMQQVKDFEDKKFACLTKEGVHFEE-SEEEKQQREEEKAACEKLCKTMKEVLGDKVEKVIVSERLSTSPCILVTSE 329 (444)
T ss_dssp HHHHHHHHCCEETTEEEEETTBSSCCCCC-CHHHHHHHHHHHHHTHHHHHHHHHHHGGGCSEEEECSSCSSSSEEEEBCS
T ss_pred hHHHHHHHHHHhCCceEEEeccccccchh-hhhhhhhhHHHHHHHHHHHHHHHHHhcCcceEEEecCCCCCCCeEEEcCC
Confidence 99999999999999999999999998865 44444444566778999999999999999999999999999999999999
Q ss_pred CcccHHHHHHHHHHhhcCCCcccccCCCceEEeCCCChHHHHHHHhhhccCCchhHHHHHHHHhHHHHHhCCCCCCCHHH
Q 007669 471 YGWSANMERIMKAQALRDNSMSSYMSSKKTMEINPDNGIMEELRKRAEADKNDKSVKDLTMLLFETALLTSGFSLDDPNT 550 (594)
Q Consensus 471 ~g~s~~Merimkaq~~~~~~~~~~~~~k~~LEINp~HpLIk~L~~~~~~~~~~e~~~~~~~~Lyd~AlL~~G~~l~d~~~ 550 (594)
+|||++|+|||++|++.++.+.+++..+++|||||+||||++|.++...+.+++.++++|++|||+|||++|++++||+.
T Consensus 330 ~g~s~~Merimka~~~~~~~~~~~~~~k~~LEINp~Hpli~~L~~~~~~d~~~~~~~~l~~lLyd~AlL~~G~~ledp~~ 409 (444)
T 3hjc_A 330 FGWSAHMEQIMRNQALRDSSMAQYMMSKKTMELNPRHPIIKELRRRVGADENDKAVKDLVFLLFDTSLLTSGFQLEDPTG 409 (444)
T ss_dssp SSBCHHHHHHHHHC--------CTTBCCCEEEECTTSHHHHHHHHHHHTC-CCHHHHHHHHHHHHHHHHHHTCCCSCHHH
T ss_pred ccccHHHHHHHHHhcccccccccccccCeeEEECCCCHHHHHHHHHhhcCcchHHHHHHHHHHHHHHHHhCCCCcccHHH
Confidence 99999999999999876554445677899999999999999999987666667889999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCcc
Q 007669 551 FGSRIHRMLKLGLSIDEE 568 (594)
Q Consensus 551 f~~r~~~lL~~~l~~~~~ 568 (594)
|++|+|+||..+||++++
T Consensus 410 f~~ri~~ll~~~l~~~~~ 427 (444)
T 3hjc_A 410 YAERINRMIKLGLSLDEE 427 (444)
T ss_dssp HHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHHhcCCCcc
Confidence 999999999999999876
No 5
>3q6m_A Heat shock protein HSP 90-alpha; three domains, trimer of dimer, hexamer, chaperone; 3.00A {Homo sapiens} PDB: 3q6n_A
Probab=100.00 E-value=1.9e-123 Score=996.47 Aligned_cols=414 Identities=74% Similarity=1.179 Sum_probs=359.2
Q ss_pred cCCCCccCCCCCCCHHHHHHHHHHhhcCcCCCceeeeeeccccceeEEEEeecCCCCCCcccccccccceEEEeeccccc
Q 007669 158 KQKPIWLRKPEEITKEEYASFYKSLTNDWEDHLAVKHFSVEGQLEFKAVLFVPKRAPFDLFDTRKKMNNIKLYVRRVFIM 237 (594)
Q Consensus 158 ~~~~iW~r~~~evt~eey~~Fyk~l~~~~~~Pl~~ih~~~eg~~~~~~llyiP~~~p~~~~~~~~~~~~i~LY~rrVfI~ 237 (594)
.++|||+|+|++||+|||.+|||+++++|++||+|+||++||+++|+||||||+++|+++|+....++||+||||||||+
T Consensus 2 ~~~plW~r~~~eit~EeY~eFYk~l~~d~~dPL~~iH~~veg~~e~~~lLyiP~~ap~d~~~~~~~~~~ikLYvrrVfI~ 81 (448)
T 3q6m_A 2 ATKPIWTRNPDDITNEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFVPRRAPFDLFENRKKKNNIKLYVRRVFIM 81 (448)
T ss_dssp --CCGGGSCTTSCCHHHHHHHHHHHHCCSSCCSEEEEEEECSSSCEEEEEEECSSCCC---------CCEEEEETTEEEE
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHhcCCccCChheeeeccCCCeeeEEEEEccCCCchhhhhhhhhccceeEEeeeeEEe
Confidence 36799999999999999999999999999999999999999999999999999999999997545679999999999999
Q ss_pred cccccccccccccceeeeeCCCCCCccchhhhcccHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHhhHhhccccC
Q 007669 238 DNCEELIPEYLGFIKGVVDSDDLPLNISREMLQQNKILKVIRKNLVKKCIEMFNEIAENKEDYNKFYDAFSKNLKLGIHE 317 (594)
Q Consensus 238 d~~~~lLP~wl~FvrGVVDS~dLpLNvSRE~LQ~~~~l~~I~~~i~kkvl~~L~~la~d~e~y~~f~~~~~~~lK~G~~e 317 (594)
|+|++|||+||+||||||||+|||||||||+||+|++|++||+.|++||+++|.++++|+++|++||++||.+||+|+++
T Consensus 82 d~~~ellP~yL~FvkGVVDS~DLPLNVSRE~LQ~~~~lk~Irk~i~kKvl~~L~~la~d~e~Y~~f~~~fg~~lK~Gi~e 161 (448)
T 3q6m_A 82 DNCEELIPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVIRKNLVKKCLELFTELAEDKENYKKFYEQFSKNIKLGIHE 161 (448)
T ss_dssp SCCTTSSCGGGTTCEEEEEESCCC---------CCSHHHHHHHHHHHHHHHHHHHHTSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhhhchhhhhheeEEeccCCCCccccHHhhccCHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhHHHHhhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhhHHHHhchhcccccCCCCceecHHHHHHhhccCCceEEEEeCCcHHHHhcChhHHHHHHcCceEEeecCCccHHHHH
Q 007669 318 DSQNRAKLADLLRYHSTKSSEEFTSLKDYVTRMKEGQKDIYYITGESKKAVENSPFLERLKKKGYEVLYMVDAIDEYAVG 397 (594)
Q Consensus 318 D~~~~e~l~~LLrf~ss~~~~~~~sL~eYv~rm~~~Q~~IYY~~~~~~~~~~~sp~le~~~~~g~eVL~l~dpiDE~~l~ 397 (594)
|..||++|++||||+||.++++++||+||++||+++|+.|||++|+|++++++|||+|.|+++|||||||++||||++++
T Consensus 162 D~~n~~~l~~LLrF~Ss~~~~~~~SL~eYv~rmke~Qk~IYYitg~s~~~~~~sp~lE~~k~kG~EVL~l~d~iDe~~i~ 241 (448)
T 3q6m_A 162 DSQNRKKLSELLRYYTSASGDEMVSLKDYCTRMKENQKHIYYITGETKDQVANSAFVERLRKHGLEVIYMIEPIDEYCVQ 241 (448)
T ss_dssp CGGGHHHHHTTCEEEETTTTTSCEEHHHHHHTCCSSCCEEEEEECSCHHHHHTSGGGHHHHHHTCCEEEECSTHHHHHTT
T ss_pred cHHHHHHHHHhhEeeeccCCCceEeHHHHHHhccccCceEEEEecCCHHHHHhChHHHHHHHCCCEEEEecCchHHHHHH
Confidence 99999999999999999876789999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhccCceeEeccccCCCCCCccHHHHhhHHHhHHhHHHHHHHHHHHhCCceeEEEEeecCCCCCeEEEeCCCcccHHH
Q 007669 398 QLKEYEGKKLVSATKEGLKLDDETEEEKKKKEEKKKSFENLCKTMKDILGDRVEKVVVSDRIVDSPCCLVTGEYGWSANM 477 (594)
Q Consensus 398 ~L~~~~~~~f~~V~~~~l~l~~~~~~~k~~~~~~~~e~~~L~~~lk~~L~~~V~~V~vs~rL~dsPa~lv~~e~g~s~~M 477 (594)
+|++|+|++|+||+++++++++ ++++++..++.++++++|++|||++|+++|++|++|+||++||||||++++|||++|
T Consensus 242 ~L~ef~gk~~~sV~k~~l~l~~-~eeek~~~ee~~~~~~~L~~~~K~~L~~kV~~V~vS~RL~~sP~~lv~~e~g~s~~M 320 (448)
T 3q6m_A 242 QLKEFEGKTLVSVTKEGLELPE-DEEEKKKQEEKKTKFENLCKIMKDILEKKVEKVVVSNRLVTSPCCIVTSTYGWTANM 320 (448)
T ss_dssp TCCEETTEEEEETTBSCCCCCC-CHHHHHHHHHHHHHSHHHHHHHHHHTGGGCSEEEECSSCSSSSEEEEECSSSCCHHH
T ss_pred HHHhhCCceEEEecccccCccc-chhhhhhHHHHHHHHHHHHHHHHHHhcCcceEEEecCCCCCCCeEEEeCCcchhHHH
Confidence 9999999999999999999876 444554445566789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCcccccCCCceEEeCCCChHHHHHHHhhhccCCchhHHHHHHHHhHHHHHhCCCCCCCHHHHHHHHHH
Q 007669 478 ERIMKAQALRDNSMSSYMSSKKTMEINPDNGIMEELRKRAEADKNDKSVKDLTMLLFETALLTSGFSLDDPNTFGSRIHR 557 (594)
Q Consensus 478 erimkaq~~~~~~~~~~~~~k~~LEINp~HpLIk~L~~~~~~~~~~e~~~~~~~~Lyd~AlL~~G~~l~d~~~f~~r~~~ 557 (594)
||||++|+..++.+.+++..+++|||||+||||++|.++...+.+++.++++|++|||||+|++|++|+||+.|++|||+
T Consensus 321 erimkaq~~~d~~~~~~~~~kk~LEINp~Hpli~~L~~~~~~d~~~~~~~~~~~lLyd~AlL~~G~~l~DP~~f~~ri~~ 400 (448)
T 3q6m_A 321 ERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYR 400 (448)
T ss_dssp HHHCCC--------------CEEEEECTTCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHTTCCCSCHHHHHHHHHH
T ss_pred HHHHHHhhccccccccccccCceeEECCCCHHHHHHHHHhhcccchhHHHHHHHHHHHhHHhcCCCCCCCHHHHHHHHHH
Confidence 99999988665544456778999999999999999999877666678899999999999999999999999999999999
Q ss_pred HHHhcCCCCcccccC
Q 007669 558 MLKLGLSIDEEENAD 572 (594)
Q Consensus 558 lL~~~l~~~~~~~~~ 572 (594)
||..+||++.+++..
T Consensus 401 ll~~~L~id~~~~~~ 415 (448)
T 3q6m_A 401 MIKLGLGIDEDDPTA 415 (448)
T ss_dssp HHHHTTC--------
T ss_pred HHHHhcCCCcccccc
Confidence 999999998775443
No 6
>2cge_A ATP-dependent molecular chaperone HSP82; chaperone complex, heat shock protein, CO-chaperone, ATP-binding, heat shock; 3.0A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-119 Score=967.75 Aligned_cols=404 Identities=69% Similarity=1.097 Sum_probs=379.8
Q ss_pred CCCCccCCCCCCCHHHHHHHHHHhhcCcCCCceeeeeeccccceeEEEEeecCCCCCCcccccccccceEEEeecccccc
Q 007669 159 QKPIWLRKPEEITKEEYASFYKSLTNDWEDHLAVKHFSVEGQLEFKAVLFVPKRAPFDLFDTRKKMNNIKLYVRRVFIMD 238 (594)
Q Consensus 159 ~~~iW~r~~~evt~eey~~Fyk~l~~~~~~Pl~~ih~~~eg~~~~~~llyiP~~~p~~~~~~~~~~~~i~LY~rrVfI~d 238 (594)
++|||+|+|++||+|||.+|||+++++|++||+|+||++||+++|+||||||+.+|+++|+....++||+||||||||+|
T Consensus 1 ~~plW~r~~~eit~EeY~eFYk~l~~d~~~PL~~iH~~veg~~~~~~lLyiP~~ap~d~~~~~~~~~~ikLYvrrVfI~d 80 (405)
T 2cge_A 1 TKPLWTRNPSDITQEEYNAFYKSISNDWEDPLYVKHFSVEGQLEFRAILFIPKRAPFDLFESKKKKNNIKLYVRRVFITD 80 (405)
T ss_dssp CCCGGGSCGGGSCTTHHHHHHHHHHCCSSCCSEEEEEEECSSSCEEEEEEECSSCSSCSSSSCCCCCCCEEEETTEEEES
T ss_pred CCCCcCCCcccCCHHHHHHHHHHhcCCCcCCeeEEEeccCCCcceeEEEEecCCCchhhhhhhhccCCeEEEEeeeEecC
Confidence 46999999999999999999999999999999999999999999999999999999999985555799999999999999
Q ss_pred ccccccccccccceeeeeCCCCCCccchhhhcccHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHhhHhhccccCC
Q 007669 239 NCEELIPEYLGFIKGVVDSDDLPLNISREMLQQNKILKVIRKNLVKKCIEMFNEIAENKEDYNKFYDAFSKNLKLGIHED 318 (594)
Q Consensus 239 ~~~~lLP~wl~FvrGVVDS~dLpLNvSRE~LQ~~~~l~~I~~~i~kkvl~~L~~la~d~e~y~~f~~~~~~~lK~G~~eD 318 (594)
+|++|||+||+||||||||+|||||||||+||+|++|++||+.|++||+++|.++++||++|++||++||.+||+|+++|
T Consensus 81 ~~~~llP~yL~FvkGVVDS~DLPLNvSRE~LQ~~~~lk~I~~~l~kkvl~~L~~la~~~e~y~kf~~~fg~~lK~G~~eD 160 (405)
T 2cge_A 81 EAEDLIPEWLSFVKGVVDSEDLPLNLSREMLQQNKIMKVIRKNIVKKLIEAFNEIAEDSEQFEKFYSAFSKNIKLGVHED 160 (405)
T ss_dssp SCSSSSCGGGTTCEEEEEESSCCSSCCTTCTHHHHHHHHHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHC
T ss_pred chhhhChHHHHHHhhcccccccCcccChhhhcccHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHhhhhhcchhccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHhchhcccccCCCCceecHHHHHHhhccCCceEEEEeCCcHHHHhcChhHHHHHHcCceEEeecCCccHHHHHh
Q 007669 319 SQNRAKLADLLRYHSTKSSEEFTSLKDYVTRMKEGQKDIYYITGESKKAVENSPFLERLKKKGYEVLYMVDAIDEYAVGQ 398 (594)
Q Consensus 319 ~~~~e~l~~LLrf~ss~~~~~~~sL~eYv~rm~~~Q~~IYY~~~~~~~~~~~sp~le~~~~~g~eVL~l~dpiDE~~l~~ 398 (594)
+.||++|++||||+||.++++++||+||++||+++|+.|||++|+|++++++|||+|.|+++|||||||++||||+++++
T Consensus 161 ~~~~~~l~~lLrF~ss~~~~~~~sL~eYv~rmke~Q~~IyY~t~~s~~~~~~sp~~E~~k~kG~EVL~l~d~iDe~~i~~ 240 (405)
T 2cge_A 161 TQNRAALAKLLRYNSTKSVDELTSLTDYVTRMPEHQKNIYYITGESLKAVEKSPFLDALKAKNFEVLFLTDPIDEYAFTQ 240 (405)
T ss_dssp TTTHHHHHTTCEECBSSCSSSCEEHHHHHHTCCTTCCSEEEEECSCHHHHHTCTTHHHHHHHTCCEEEECSHHHHHHHHH
T ss_pred HHHHHHHHHhheeeecCCCCceeeHHHHHHhccCCCceEEEEeCCCHHHHhcChHHHHHHhCCCEEEEecCchHHHHHHH
Confidence 99999999999999998766799999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhccCceeEeccccCCCCCCccHHHHhhHHHhHHhHHHHHHHHHHHhCCceeEEEEeecCCCCCeEEEeCCCcccHHHH
Q 007669 399 LKEYEGKKLVSATKEGLKLDDETEEEKKKKEEKKKSFENLCKTMKDILGDRVEKVVVSDRIVDSPCCLVTGEYGWSANME 478 (594)
Q Consensus 399 L~~~~~~~f~~V~~~~l~l~~~~~~~k~~~~~~~~e~~~L~~~lk~~L~~~V~~V~vs~rL~dsPa~lv~~e~g~s~~Me 478 (594)
|.+|+|++|++|+++ +++++ .+++++..++.++++++|++|||++|+++|.+|++|+||+++|||+|++++|||++||
T Consensus 241 L~e~~gk~~~sV~~~-l~l~~-~e~~~~~~~~~~~~~~~L~~~~k~~L~~~v~~V~~s~rl~~sP~~lv~~~~~~s~~me 318 (405)
T 2cge_A 241 LKEFEGKTLVDITKD-FELEE-TDEEKAEREKEIKEYEPLTKALKEILGDQVEKVVVSYKLLDAPAAIRTGQFGWSANME 318 (405)
T ss_dssp HCBSSSBEEESSBCC-CCSSS-STHHHHHHHHHHHHHHHHHHHHHHHHTTSCSEEEECSSCCSSSEEEEECSSSCCHHHH
T ss_pred HHHhCCceeEEcccc-ccccc-cchhhhhhhHhHHHHHHHHHHHHHHhcCcceEEEEEeccCCCCeEEEeccccccHHHH
Confidence 999999999999999 88865 4444444445677899999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCCcccccCCCceEEeCCCChHHHHHHHhhhcc-CCchhHHHHHHHHhHHHHHhCCCCCCCHHHHHHHHHH
Q 007669 479 RIMKAQALRDNSMSSYMSSKKTMEINPDNGIMEELRKRAEAD-KNDKSVKDLTMLLFETALLTSGFSLDDPNTFGSRIHR 557 (594)
Q Consensus 479 rimkaq~~~~~~~~~~~~~k~~LEINp~HpLIk~L~~~~~~~-~~~e~~~~~~~~Lyd~AlL~~G~~l~d~~~f~~r~~~ 557 (594)
|||++|++.++.+.+++..+++|||||+||||++|.++...+ .+++.++++|++|||+|+|++|++++||+.|++|+|+
T Consensus 319 r~~k~~~~~~~~~~~~~~~k~~LeiNp~Hpli~~L~~~~~~~~~~~~~~~~~~~~Lyd~AlL~~G~~~~dp~~f~~r~~~ 398 (405)
T 2cge_A 319 RIMKAQALRDSSMSSYMSSKKTFEISPKSPIIKELKKRVDEGGAQDKTVKDLTKLLYETALLTSGFSLDEPTSFASRINR 398 (405)
T ss_dssp HHHHHHHTTSSSCCCCCCCCEEEEECTTSHHHHHHHHHHTTTGGGCHHHHHHHHHHHHHHHHHTTCCCSCHHHHHHHHHH
T ss_pred HHHHHhhccccccccccccCeeEEEcCCCHHHHHHHHhhhccccCHHHHHHHHHHHHHHHHHhCCCCcccHHHHHHHHHH
Confidence 999999876666656677899999999999999998876433 3457799999999999999999999999999999999
Q ss_pred HHHhcCC
Q 007669 558 MLKLGLS 564 (594)
Q Consensus 558 lL~~~l~ 564 (594)
||.++||
T Consensus 399 ll~~~l~ 405 (405)
T 2cge_A 399 LISLGLN 405 (405)
T ss_dssp HHHHHHC
T ss_pred HHHHhcC
Confidence 9988765
No 7
>1y4s_A Chaperone protein HTPG; HSP90, molecular chaperone, ATPase; HET: ADP; 2.90A {Escherichia coli} PDB: 1y4u_A
Probab=100.00 E-value=3.2e-116 Score=974.06 Aligned_cols=438 Identities=39% Similarity=0.731 Sum_probs=339.4
Q ss_pred CCcccccccccccceeccccCeeEEEeccCC---CCeEEEEECCCCceEEEeCCCCCCCCcceEEEEEeccchhhccCHH
Q 007669 8 ADVSMIGQFGVGFYSAYLVAERVVVTTKHND---DEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEER 84 (594)
Q Consensus 8 ~~~~lIGQFGvGFyS~FmVAdkV~V~Srs~~---~~~~~W~s~g~g~y~i~~~~~~~~~~~GT~I~L~lk~d~~e~l~~~ 84 (594)
.+.++||||||||||||||||+|+|+||+++ +.+|+|+|+|+|.|+|.+ . ...++||+|+||||+++.+||+.+
T Consensus 115 ~~~~~iG~fGvGfyS~f~VadkV~V~Sr~~~~~~~~~~~w~s~g~~~~~i~~-~--~~~~~GT~I~L~Lk~d~~Efle~~ 191 (559)
T 1y4s_A 115 KDSQLIGQFGVGFYSAFIVADKVTVRTRAAGEKPENGVFWESAGEGEYTVAD-I--TKEDRGTEITLHLREGEDEFLDDW 191 (559)
T ss_dssp --CCCCSSCCCSGGGHHHHEEEEEEEEECSSSCGGGEEEEEECSSSEEEEEE-E--CCCSCEEEEEEEECTTCGGGSCHH
T ss_pred ccccccCCCCcchhhhhhccCeEEEEEcCCCCCCCeeEEEEEeCCCeeEEeE-C--CCCCCCeEEEEEEcchhhhcchHH
Confidence 3567999999999999999999999999976 679999999999999987 3 234899999999999999999999
Q ss_pred HHHHHHHHhcCCCCcceEEeeccccccccCCCCCCCccccccCCccccchHHhhhccccccceeeeceeeecccCCCCcc
Q 007669 85 RIKDLVKKHSEFISYPIYLWTEKTTEKEISDDEDDEPKKEEEGDVEDVDEEKEKEGKKKKKIKEVSHEWQLINKQKPIWL 164 (594)
Q Consensus 85 ~i~~li~kYs~fi~~PI~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~iW~ 164 (594)
+|++||+|||+||++||+++.+ +. ++ ++ + ..+|+.+|+.+|+|+
T Consensus 192 ~I~~iv~kys~fi~~PI~~~~~---e~----~~-----------------------~~-----~-~~~~~~in~~~~lw~ 235 (559)
T 1y4s_A 192 RVRSIISKYSDHIALPVEIEKR---EE----KD-----------------------GE-----T-VISWEKINKAQALWT 235 (559)
T ss_dssp HHHHHHHHHHTTCSSCEEEEEE---EC----ST-----------------------TS-----C-EEEEEECCCCCCGGG
T ss_pred HHHHHHHHHhccCCCceEEeec---cc----cc-----------------------cc-----c-ccceEEEeCCcccee
Confidence 9999999999999999999751 00 00 00 0 246899999999999
Q ss_pred CCCCCCCHHHHHHHHHHhhcCcCCCceeeeeeccccceeEEEEeecCCCCCCcccccccccceEEEeecccccccccccc
Q 007669 165 RKPEEITKEEYASFYKSLTNDWEDHLAVKHFSVEGQLEFKAVLFVPKRAPFDLFDTRKKMNNIKLYVRRVFIMDNCEELI 244 (594)
Q Consensus 165 r~~~evt~eey~~Fyk~l~~~~~~Pl~~ih~~~eg~~~~~~llyiP~~~p~~~~~~~~~~~~i~LY~rrVfI~d~~~~lL 244 (594)
++++++++++|.+||++++++|.+||+|+|++++|+++|+|+||+|..+|+++|.. ..+++++||||||||+|+|++||
T Consensus 236 ~~~~~i~~e~y~~fy~~~~~d~~~~l~~ih~~~eg~~~~~gll~~P~~~p~~~~~r-~~~~~i~lyvn~v~I~d~~~~ll 314 (559)
T 1y4s_A 236 RNKSEITDEEYKEFYKHIAHDFNDPLTWSHNRVEGKQEYTSLLYIPSQAPWDMWNR-DHKHGLKLYVQRVFIMDDAEQFM 314 (559)
T ss_dssp SCGGGCCHHHHHHHHHHHHTCSSCEEEEEEECCCSSSCEEEEEEEESSCCTTCSSS-SCCCCEEEEETTEEEEEEEGGGS
T ss_pred cCcccccHHHHHHHHHhhhhhhhcCeEEEEeccCCceEEEEEEEcCCcCcchhhhh-cccCCeEEEEcCEEeecchhhhC
Confidence 99999999999999999999999999999999999999999999999999999863 35789999999999999999999
Q ss_pred ccccccceeeeeCCCCCCccchhhhcccHHHHHHHHHHHHHHHHHHHHHhh-CHHHHHHHHHHHhhHhhccccCChhhHH
Q 007669 245 PEYLGFIKGVVDSDDLPLNISREMLQQNKILKVIRKNLVKKCIEMFNEIAE-NKEDYNKFYDAFSKNLKLGIHEDSQNRA 323 (594)
Q Consensus 245 P~wl~FvrGVVDS~dLpLNvSRE~LQ~~~~l~~I~~~i~kkvl~~L~~la~-d~e~y~~f~~~~~~~lK~G~~eD~~~~e 323 (594)
|+||+||+|||||+|||||||||+||+|+++++||+.|++||+++|.+|++ ||++|++||++||.+||+|+++|+.||+
T Consensus 315 P~~l~fv~gvVDs~dlplNVSRE~lq~~~~l~~I~~~l~kkv~~~l~~l~~~d~e~y~~f~~~f~~~lK~G~~~D~~~~~ 394 (559)
T 1y4s_A 315 PNYLRFVRGLIDSSDLPLNVSREILQDSTVTRNLRNALTKRVLQMLEKLAKDDAEKYQTFWQQFGLVLKEGPAEDFANQE 394 (559)
T ss_dssp CGGGTTCEEEEEESSSCTTCCTTGGGGCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTSTTTCGGGHH
T ss_pred hHhHhheeEeeChhhCCCeeCchhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhHHhhhhhccCHHHHH
Confidence 999999999999999999999999999999999999999999999999998 9999999999999999999999999999
Q ss_pred HHhchhcccccCCCC--ceecHHHHHHhhccCCceEEEEeCCcHHHHhcChhHHHHHHcCceEEeecCCccHHHHHhhhh
Q 007669 324 KLADLLRYHSTKSSE--EFTSLKDYVTRMKEGQKDIYYITGESKKAVENSPFLERLKKKGYEVLYMVDAIDEYAVGQLKE 401 (594)
Q Consensus 324 ~l~~LLrf~ss~~~~--~~~sL~eYv~rm~~~Q~~IYY~~~~~~~~~~~sp~le~~~~~g~eVL~l~dpiDE~~l~~L~~ 401 (594)
+|++||||+||.+++ +++||+||++||+++|+.|||++|+|++++++|||+|.|+++|||||||++||||+++++|.+
T Consensus 395 ~l~~ll~f~ss~~~~~~~~~sL~eY~~rmk~~q~~IyY~t~~~~~~~~~sp~~e~~~~kg~eVl~~~~~iDe~~~~~l~~ 474 (559)
T 1y4s_A 395 AIAKLLRFASTHTDSSAQTVSLEDYVSRMKEGQEKIYYITADSYAAAKSSPHLELLRKKGIEVLLLSDRIDEWMMNYLTE 474 (559)
T ss_dssp HHHTTCEEBCSSCSSSSCCEETTSSSTTCCTTCSCCBEECCSSSHHHHTCSSSHHHHHTTCCCEECCSTTHHHHHHHCCC
T ss_pred HHHHhhEeeecCCCcCCCeeeHHHHHHhccccCceEEEEeCCCHHHHhhChHHHHHHhCCceEEEecChHHHHHHHHHHH
Confidence 999999999998653 799999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCceeEeccccCCCCCCccHHHHhhHHHhHHhHHHHHHHHHHHhCCceeEEEEeecCCCCCeEEEeCCCcccHHHHHHH
Q 007669 402 YEGKKLVSATKEGLKLDDETEEEKKKKEEKKKSFENLCKTMKDILGDRVEKVVVSDRIVDSPCCLVTGEYGWSANMERIM 481 (594)
Q Consensus 402 ~~~~~f~~V~~~~l~l~~~~~~~k~~~~~~~~e~~~L~~~lk~~L~~~V~~V~vs~rL~dsPa~lv~~e~g~s~~Merim 481 (594)
|+|++|++|+++++++++..+++++..++.++++++|++|||++|+++|++|++|+||+++|||||++++|||++|+|||
T Consensus 475 ~~~k~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~k~~L~~~v~~V~~s~rl~~sp~~~v~~~~~~~~~m~~~~ 554 (559)
T 1y4s_A 475 FDGKPFQSVSKVDESLEKLADEVDESAKEAEKALTPFIDRVKALLGERVKDVRLTHRLTDTPAIVSTDADEMSTQMAKLF 554 (559)
T ss_dssp CSSSCCBCC-----------------------------------------------------------------------
T ss_pred hCCceEEecccccccccccchhhhhhhhHHHHHHHHHHHHHHHHhcCCceEEEEeccCCCCCEEEEeCCCCcCHHHHHHH
Confidence 99999999999999876421233333345567899999999999999999999999999999999999999999999999
Q ss_pred HHHh
Q 007669 482 KAQA 485 (594)
Q Consensus 482 kaq~ 485 (594)
++|+
T Consensus 555 ~~~~ 558 (559)
T 1y4s_A 555 AAAG 558 (559)
T ss_dssp ----
T ss_pred HhcC
Confidence 9975
No 8
>1hk7_A Heat shock protein HSP82; ATPase, chaperone; 2.5A {Saccharomyces cerevisiae} SCOP: d.14.1.8
Probab=100.00 E-value=3.1e-94 Score=732.44 Aligned_cols=288 Identities=69% Similarity=1.122 Sum_probs=242.8
Q ss_pred CCCCccCCCCCCCHHHHHHHHHHhhcCcCCCceeeeeeccccceeEEEEeecCCCCCCcccccccccceEEEeecccccc
Q 007669 159 QKPIWLRKPEEITKEEYASFYKSLTNDWEDHLAVKHFSVEGQLEFKAVLFVPKRAPFDLFDTRKKMNNIKLYVRRVFIMD 238 (594)
Q Consensus 159 ~~~iW~r~~~evt~eey~~Fyk~l~~~~~~Pl~~ih~~~eg~~~~~~llyiP~~~p~~~~~~~~~~~~i~LY~rrVfI~d 238 (594)
++|||+|+|++||+|||.+|||+++++|++||+|+||++||+++|+||||||+++|+++|+..+.++||+||||||||||
T Consensus 1 ~~plW~r~~~eit~EeY~eFYk~l~~d~~dPL~~~H~~veg~~~~~~lLyiP~~ap~dl~~~~~~~~~ikLYvrrVfI~d 80 (288)
T 1hk7_A 1 TKPLWTRNPSDITQEEYNAFYKSISNDWEDPLYVKHFSVEGQLEFRAILFIPKRAPFDLFESKKKKNNIKLYVRRVFITD 80 (288)
T ss_dssp CCCGGGSCTTTCCTTHHHHHHHHHHSCCSCCSEEEEEEECSSSCEEEEEEECSSCCCCCSSSCCCCCCCEEEETTEEEES
T ss_pred CCCcccCCchhCCHHHHHHHHHHhcCCcccCeeEEEEeccCCceeEEEEEecCCCcchhhhhhhccCCeEEEEeeeEeec
Confidence 36999999999999999999999999999999999999999999999999999999999986555799999999999999
Q ss_pred ccccccccccccceeeeeCCCCCCccchhhhcccHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHhhHhhccccCC
Q 007669 239 NCEELIPEYLGFIKGVVDSDDLPLNISREMLQQNKILKVIRKNLVKKCIEMFNEIAENKEDYNKFYDAFSKNLKLGIHED 318 (594)
Q Consensus 239 ~~~~lLP~wl~FvrGVVDS~dLpLNvSRE~LQ~~~~l~~I~~~i~kkvl~~L~~la~d~e~y~~f~~~~~~~lK~G~~eD 318 (594)
+|++|||+||+||||||||+|||||||||+||+|++|++||+.|++||+++|.++++||++|++||++||.+||+|+++|
T Consensus 81 ~~~~llP~yL~FvkGVVDS~DLPLNvSRE~LQ~~~~lk~I~k~i~kkvl~~l~~la~d~e~Y~kf~~~fg~~lK~Gi~eD 160 (288)
T 1hk7_A 81 EAEDLIPEWLSFVKGVVDSEDLPLNLSREMLQQNKIMKVIRKNIVKKLIEAFNEIAEDSEQFEKFYSAFSKNIKLGVHED 160 (288)
T ss_dssp SCSSSSCGGGTTCEEEEEESSCCCC-------CCHHHHHHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHC
T ss_pred chhhhchHHHHHHhhcccccccCCcccHHHhccCHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHhHHHhhhhccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHhchhcccccCCCCceecHHHHHHhhccCCceEEEEeCCcHHHHhcChhHHHHHHcCceEEeecCCccHHHHHh
Q 007669 319 SQNRAKLADLLRYHSTKSSEEFTSLKDYVTRMKEGQKDIYYITGESKKAVENSPFLERLKKKGYEVLYMVDAIDEYAVGQ 398 (594)
Q Consensus 319 ~~~~e~l~~LLrf~ss~~~~~~~sL~eYv~rm~~~Q~~IYY~~~~~~~~~~~sp~le~~~~~g~eVL~l~dpiDE~~l~~ 398 (594)
..||++|++||||+||+++++++||+||++||+++|+.|||++|+|++++++|||+|.|+++|||||||++||||++|++
T Consensus 161 ~~nr~~l~~LLrf~ss~~~~~~~SL~eYv~rmke~Qk~IYYitg~s~~~~~~sp~lE~~k~kg~EVL~l~d~iDe~~i~~ 240 (288)
T 1hk7_A 161 TQNRAALAKLLRYNSTKSVDELTSLTDYVTRMPEHQKNIYYITGESLKAVEKSPFLDALKAKNFEVLFLTDPIDEYAFTQ 240 (288)
T ss_dssp TTTHHHHHTTCCBEESSCSSSCBCHHHHHHHSCTTCCEEEEEECSSHHHHHTCGGGHHHHTTTCCCEEECSHHHHHHHHH
T ss_pred HHHHHHHHHHhccccccCCCCcccHHHHHhhCcCCCceEEEEeCCCHHHHhcCHHHHHHHHCCCEEEEecCchHHHHHhh
Confidence 99999999999999998766899999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhccCceeEeccccCCCCCCccHHHHhhHHHhHHhHHHHHHHHHHHhCC
Q 007669 399 LKEYEGKKLVSATKEGLKLDDETEEEKKKKEEKKKSFENLCKTMKDILGD 448 (594)
Q Consensus 399 L~~~~~~~f~~V~~~~l~l~~~~~~~k~~~~~~~~e~~~L~~~lk~~L~~ 448 (594)
|++|+|++|+||+++ +++++ .+++++..++.++++++|++|||++||+
T Consensus 241 L~e~~gk~~~sv~k~-~~l~~-~~eek~~~e~~~~~~~~L~~~~K~~L~~ 288 (288)
T 1hk7_A 241 LKEFEGKTLVDITKD-FELEE-TDEEKAEREKEIKEYEPLTKALKEILGD 288 (288)
T ss_dssp HCEETTEEEEETTTC-----------------------------------
T ss_pred hhhcCCceeeecccc-ccccc-hhhhhhhhHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999998 88765 3333444445567899999999999974
No 9
>2gq0_A Chaperone protein HTPG; molecular chaperone, HSP90, E. coli, hydrolase; 1.90A {Escherichia coli}
Probab=100.00 E-value=4.5e-92 Score=721.12 Aligned_cols=288 Identities=42% Similarity=0.741 Sum_probs=246.8
Q ss_pred CCCCccCCCCCCCHHHHHHHHHHhhcCcCCCceeeeeeccccceeEEEEeecCCCCCCcccccccccceEEEeecccccc
Q 007669 159 QKPIWLRKPEEITKEEYASFYKSLTNDWEDHLAVKHFSVEGQLEFKAVLFVPKRAPFDLFDTRKKMNNIKLYVRRVFIMD 238 (594)
Q Consensus 159 ~~~iW~r~~~evt~eey~~Fyk~l~~~~~~Pl~~ih~~~eg~~~~~~llyiP~~~p~~~~~~~~~~~~i~LY~rrVfI~d 238 (594)
++|||+|+|++||+|||.+|||+++++|++||+|+||++||+++|+||||||+.+|+++|+.. .++||+||||||||||
T Consensus 2 ~~plW~r~~~eit~EeY~eFYk~l~~d~~dPL~~iH~~vEg~~~~~~lLyiP~~ap~dl~~~~-~~~~ikLYvrrVfI~D 80 (303)
T 2gq0_A 2 AQALWTRNKSEITDEEYKEFYKHIAHDFNDPLTWSHNRVEGKQEYTSLLYIPSQAPWDMWNRD-HKHGLKLYVQRVFIMD 80 (303)
T ss_dssp CCCGGGSCGGGSCHHHHHHHHHHHHTCCSCCSEEEEEEECSSSCEEEEEEECSSCCTTTTSTT-CCCSEEEEETTEEEEE
T ss_pred CCCCcCCCcccCCHHHHHHHHHHHcCCccCcceeEEeccccccceeEEEEecCCCCchhhhhh-ccCCeEEEEeceEeec
Confidence 479999999999999999999999999999999999999999999999999999999998743 4789999999999999
Q ss_pred ccccccccccccceeeeeCCCCCCccchhhhcccHHHHHHHHHHHHHHHHHHHHHhh-CHHHHHHHHHHHhhHhhccccC
Q 007669 239 NCEELIPEYLGFIKGVVDSDDLPLNISREMLQQNKILKVIRKNLVKKCIEMFNEIAE-NKEDYNKFYDAFSKNLKLGIHE 317 (594)
Q Consensus 239 ~~~~lLP~wl~FvrGVVDS~dLpLNvSRE~LQ~~~~l~~I~~~i~kkvl~~L~~la~-d~e~y~~f~~~~~~~lK~G~~e 317 (594)
+|++|||+||+||||||||+|||||||||+||+|++|++||+.|++||+++|.++|+ ||++|++||++||.+||+|+++
T Consensus 81 ~~eeLlP~yL~FvkGVVDS~DLPLNvSRE~LQ~~~~lk~Irk~l~kKvl~~L~~la~~d~e~Y~kF~~~fg~~lK~Gi~e 160 (303)
T 2gq0_A 81 DAEQFMPNYLRFVRGLIDSSDLPLNVSREILQDSTVTRNLRNALTKRVLQMLEKLAKDDAEKYQTFWQQFGLVLKEGPAE 160 (303)
T ss_dssp EEGGGSCGGGTTCEEEEEESSSCTTCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTHHHH
T ss_pred chhhhchHHHHHhhcccccccCCcccchHhhcccHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhhhc
Confidence 999999999999999999999999999999999999999999999999999999998 8999999999999999999999
Q ss_pred ChhhHHHHhchhcccccCCC--CceecHHHHHHhhccCCceEEEEeCCcHHHHhcChhHHHHHHcCceEEeecCCccHHH
Q 007669 318 DSQNRAKLADLLRYHSTKSS--EEFTSLKDYVTRMKEGQKDIYYITGESKKAVENSPFLERLKKKGYEVLYMVDAIDEYA 395 (594)
Q Consensus 318 D~~~~e~l~~LLrf~ss~~~--~~~~sL~eYv~rm~~~Q~~IYY~~~~~~~~~~~sp~le~~~~~g~eVL~l~dpiDE~~ 395 (594)
|+.||++|++||||+||.++ ++++||+||++||+++|+.|||++|+|++++++|||+|.|+++|||||||++||||++
T Consensus 161 D~~nr~~l~~LLrF~Ss~~~~~~~~~SL~eYv~rmke~Qk~IYYitg~s~~~~~~sp~lE~~k~kG~EVL~l~d~iDe~~ 240 (303)
T 2gq0_A 161 DFANQEAIAKLLRFASTHTDSSAQTVSLEDYVSRMKEGQEKIYYITADSYAAAKSSPHLELLRKKGIEVLLLSDRIDEWM 240 (303)
T ss_dssp CGGGHHHHHTTCCBEETTTTCCCCCBCHHHHHHTCCTTCCSEEEEECSSHHHHHTCGGGHHHHHHTCCEEEECSTTHHHH
T ss_pred CHHHHHHHHHhheeeecCCCccCCeeeHHHHHHhcccCCceEEEEeCCCHHHHhcChHHHHHHHCCCeEEEeCchhHHHH
Confidence 99999999999999999865 4799999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhccCceeEeccccCCCCCCccHHHHhhHHHhHHhHHHHHHHHHHHhCCcee--EEEEeecCCCCCeEEEe
Q 007669 396 VGQLKEYEGKKLVSATKEGLKLDDETEEEKKKKEEKKKSFENLCKTMKDILGDRVE--KVVVSDRIVDSPCCLVT 468 (594)
Q Consensus 396 l~~L~~~~~~~f~~V~~~~l~l~~~~~~~k~~~~~~~~e~~~L~~~lk~~L~~~V~--~V~vs~rL~dsPa~lv~ 468 (594)
|++|++|+|++|++|++++++++++ + ++.|+.+|. +|.+|+||++||||+++
T Consensus 241 i~~L~e~~gk~f~sV~k~~l~l~~~-~--------------------~~~l~~~~~~~~~~~~~~~~s~~~~~~~ 294 (303)
T 2gq0_A 241 MNYLTEFDGKPFQSVSKVDESLEKL-A--------------------DGDLGTLVPRGSMAISDPNSSSVDKLAA 294 (303)
T ss_dssp TTTCCEETTEEEEETTC----------------------------------------------------------
T ss_pred HHHHHhcCCcceEEeeccccCcccc-c--------------------hhhhccccccCCccccCcCCcchHHHHH
Confidence 9999999999999999999887641 1 244577787 89999999999999876
No 10
>3pry_A Heat shock protein HSP 90-beta; structural genomics, structural genomics consortium, SGC, HE protein, chaperone; 2.28A {Homo sapiens} SCOP: d.14.1.8
Probab=100.00 E-value=2.8e-90 Score=697.83 Aligned_cols=263 Identities=73% Similarity=1.231 Sum_probs=249.7
Q ss_pred ccCCCCccCCCCCCCHHHHHHHHHHhhcCcCCCceeeeeeccccceeEEEEeecCCCCCCcccccccccceEEEeecccc
Q 007669 157 NKQKPIWLRKPEEITKEEYASFYKSLTNDWEDHLAVKHFSVEGQLEFKAVLFVPKRAPFDLFDTRKKMNNIKLYVRRVFI 236 (594)
Q Consensus 157 N~~~~iW~r~~~evt~eey~~Fyk~l~~~~~~Pl~~ih~~~eg~~~~~~llyiP~~~p~~~~~~~~~~~~i~LY~rrVfI 236 (594)
|.++|||+|+|++||+|||.+|||+++++|++||+|+|+++||+++|+||||||+++|+++|++...++||+||||||||
T Consensus 1 ~~~~plW~r~~~eit~EeY~eFYk~l~~d~~dPL~~iH~~veg~~~~~~lLyiP~~ap~d~~~~~~~~~~ikLYv~rVfI 80 (268)
T 3pry_A 1 MKTKPIWTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFIPRRAPFDLFENKKKKNNIKLYVRRVFI 80 (268)
T ss_dssp -CCSCGGGSCGGGCCHHHHHHHHHHHHCCSSCCSEEEEEEECSSSCEEEEEEECSSCCC--------CCCEEEEETTEEE
T ss_pred CCCCCCCCCChhhCCHHHHHHHHHHhcCCccCchheeeecccCCeeEEEEEEccCCCchhhhhhhhhcCCeeEEEEEEEe
Confidence 45789999999999999999999999999999999999999999999999999999999999754567999999999999
Q ss_pred ccccccccccccccceeeeeCCCCCCccchhhhcccHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHhhHhhcccc
Q 007669 237 MDNCEELIPEYLGFIKGVVDSDDLPLNISREMLQQNKILKVIRKNLVKKCIEMFNEIAENKEDYNKFYDAFSKNLKLGIH 316 (594)
Q Consensus 237 ~d~~~~lLP~wl~FvrGVVDS~dLpLNvSRE~LQ~~~~l~~I~~~i~kkvl~~L~~la~d~e~y~~f~~~~~~~lK~G~~ 316 (594)
||+|++|||+||+||||||||+|||||||||+||+|++|++||+.|++||+++|.++|+||++|++||++||.+||+|++
T Consensus 81 ~d~~~ellP~yL~FvkGVVDS~DLPLNVSRE~LQ~~~~lk~I~k~i~kkvl~~l~~la~d~e~Y~~f~~~fg~~lK~G~~ 160 (268)
T 3pry_A 81 MDSCDELIPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVIRKNIVKKCLELFSELAEDKENYKKFYEAFSKNLKLGIH 160 (268)
T ss_dssp ESCCGGGSCGGGTTCEEEEEESSSCSSCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHH
T ss_pred ecchhhhccchhhheEEEecCCCCCccccHHHhccCHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChhhHHHHhchhcccccCCCCceecHHHHHHhhccCCceEEEEeCCcHHHHhcChhHHHHHHcCceEEeecCCccHHHH
Q 007669 317 EDSQNRAKLADLLRYHSTKSSEEFTSLKDYVTRMKEGQKDIYYITGESKKAVENSPFLERLKKKGYEVLYMVDAIDEYAV 396 (594)
Q Consensus 317 eD~~~~e~l~~LLrf~ss~~~~~~~sL~eYv~rm~~~Q~~IYY~~~~~~~~~~~sp~le~~~~~g~eVL~l~dpiDE~~l 396 (594)
+|..||++|++||||+||.++++++||+||++||+++|+.|||++|+|++++++|||+|.|+++|+|||||++||||+++
T Consensus 161 eD~~~~~~l~~LLrf~ss~~~~~~~SL~eYv~rmke~Q~~IyYitg~s~~~~~~sp~~E~~k~kg~EVL~l~d~iDe~~i 240 (268)
T 3pry_A 161 EDSTNRRRLSELLRYHTSQSGDEMTSLSEYVSRMKETQKSIYYITGESKEQVANSAFVERVRKRGFEVVYMTEPIDEYCV 240 (268)
T ss_dssp HCGGGHHHHHHTCEEEETTTTTSCEEHHHHHHTSCTTCCEEEEECSCCHHHHHTCHHHHHHHTTTCCEEECCSTTHHHHH
T ss_pred CCHHHHHHHHHHheeeeccCCCccEeHHHHHHhcccCCceEEEEeCCCHHHHHhChHHHHHHHcCceEEEeCCchHHHHH
Confidence 99999999999999999987667999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhccCceeEeccccCCCCCC
Q 007669 397 GQLKEYEGKKLVSATKEGLKLDD 419 (594)
Q Consensus 397 ~~L~~~~~~~f~~V~~~~l~l~~ 419 (594)
++|++|+|++|+||+++++++++
T Consensus 241 ~~L~ef~gk~l~sv~k~~l~l~e 263 (268)
T 3pry_A 241 QQLKEFDGKSLVSVTKEGLELAE 263 (268)
T ss_dssp HHHCEETTEEEEETTCSSCCCCC
T ss_pred HHHHhcCCceeeecccccCCCcc
Confidence 99999999999999999998864
No 11
>1usu_A Heat shock protein HSP82; chaperone/complex, chaperone, activator, HSP90; 2.15A {Saccharomyces cerevisiae} SCOP: d.14.1.8 PDB: 1usv_A
Probab=100.00 E-value=2.4e-90 Score=696.48 Aligned_cols=257 Identities=72% Similarity=1.149 Sum_probs=242.2
Q ss_pred ccCCCCccCCCCCCCHHHHHHHHHHhhcCcCCCceeeeeeccccceeEEEEeecCCCCCCcccccccccceEEEeecccc
Q 007669 157 NKQKPIWLRKPEEITKEEYASFYKSLTNDWEDHLAVKHFSVEGQLEFKAVLFVPKRAPFDLFDTRKKMNNIKLYVRRVFI 236 (594)
Q Consensus 157 N~~~~iW~r~~~evt~eey~~Fyk~l~~~~~~Pl~~ih~~~eg~~~~~~llyiP~~~p~~~~~~~~~~~~i~LY~rrVfI 236 (594)
|+++|||+|+|++||+|||.+|||+++++|++||+|+|+++||+++|+||||||+++|+++|+....++||+||||||||
T Consensus 1 N~~~plW~r~~~eit~EeY~eFYk~l~~d~~~PL~~iH~~veg~~~~~~lLyiP~~ap~d~~~~~~~~~~ikLYvrrVfI 80 (260)
T 1usu_A 1 GPTKPLWTRNPSDITQEEYNAFYKSISNDWEDPLYVKHFSVEGQLEFRAILFIPKRAPFDLFESKKKKNNIKLYVRRVFI 80 (260)
T ss_dssp -CCCCGGGSCGGGCCHHHHHHHHHHHHCCSSCCSEEEEEEECSSSCEEEEEEECSSCCTTTTCC----CCEEEEETTEEE
T ss_pred CCcCCcccCCcccCCHHHHHHHHHHhcCCccCCeeEEEeeccCcceeEEEEEecCCCchhhhhhhhccCCeEEEEeeeEe
Confidence 78999999999999999999999999999999999999999999999999999999999999865557999999999999
Q ss_pred ccccccccccccccceeeeeCCCCCCccchhhhcccHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHhhHhhcccc
Q 007669 237 MDNCEELIPEYLGFIKGVVDSDDLPLNISREMLQQNKILKVIRKNLVKKCIEMFNEIAENKEDYNKFYDAFSKNLKLGIH 316 (594)
Q Consensus 237 ~d~~~~lLP~wl~FvrGVVDS~dLpLNvSRE~LQ~~~~l~~I~~~i~kkvl~~L~~la~d~e~y~~f~~~~~~~lK~G~~ 316 (594)
||+|++|||+||+||||||||+|||||||||+||+|++|++||+.|++||+++|.++|+|+++|++||++||.+||+|++
T Consensus 81 ~d~~~~llP~yL~FvkGVVDS~DLpLNvSRE~LQ~~~~lk~I~~~l~kkvl~~l~~la~d~e~y~~f~~~fg~~lK~G~~ 160 (260)
T 1usu_A 81 TDEAEDLIPEWLSFVKGVVDSEDLPLNLSREMLQQNKIMKVIRKNIVKKLIEAFNEIAEDSEQFEKFYSAFSKNIKLGVH 160 (260)
T ss_dssp ESCCTTSSCGGGTTCEEEEEESSCCSCC------CCHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhchHHHHHheeccccCCcCCccCHHHhcccHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhhhhcchhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChhhHHHHhchhcccccCCCCceecHHHHHHhhccCCceEEEEeCCcHHHHhcChhHHHHHHcCceEEeecCCccHHHH
Q 007669 317 EDSQNRAKLADLLRYHSTKSSEEFTSLKDYVTRMKEGQKDIYYITGESKKAVENSPFLERLKKKGYEVLYMVDAIDEYAV 396 (594)
Q Consensus 317 eD~~~~e~l~~LLrf~ss~~~~~~~sL~eYv~rm~~~Q~~IYY~~~~~~~~~~~sp~le~~~~~g~eVL~l~dpiDE~~l 396 (594)
+|+.||++|++||||+||.++++++||+||++||+++|+.|||++|+|++++++|||+|.|+++|+|||||++||||++|
T Consensus 161 eD~~n~~~l~~lLrf~ss~~~~~~~sL~eYv~rmke~Q~~IyY~t~~s~~~~~~sp~lE~~k~kg~EVL~l~d~iDe~~i 240 (260)
T 1usu_A 161 EDTQNRAALAKLLRYNSTKSVDELTSLTDYVTRMPEHQKNIYYITGESLKSVEKSPFLDALKAKNFEVLFLTDPIDEYAF 240 (260)
T ss_dssp HCTTTHHHHHTTCEEEETTEEEEEEEHHHHHHTSCTTCCEEEEEECSSHHHHHTCTTHHHHHHTTCCEEEECSHHHHHHH
T ss_pred cCHHHHHHHHHhhEeeecCCCCceeeHHHHHHhccCCCceEEEEeCCCHHHHhcChHHHHHHhCCCeEEEeCCchHHHHH
Confidence 99999999999999999987567999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhccCceeEecccc
Q 007669 397 GQLKEYEGKKLVSATKE 413 (594)
Q Consensus 397 ~~L~~~~~~~f~~V~~~ 413 (594)
++|++|+|++|+||+++
T Consensus 241 ~~L~e~~gk~~~sv~k~ 257 (260)
T 1usu_A 241 TQLKEFEGKTLVDITKD 257 (260)
T ss_dssp HHHCEETTEEEEETTCC
T ss_pred HHHHhhCCceEEecccc
Confidence 99999999999999997
No 12
>1y6z_A Heat shock protein, putative; chaperone, structural genomics, structural genom consortium, SGC, unknown function; 1.88A {Plasmodium falciparum}
Probab=100.00 E-value=2.1e-87 Score=678.80 Aligned_cols=258 Identities=41% Similarity=0.789 Sum_probs=231.5
Q ss_pred ccCCCCccCCCCCCCHHHHHHHHHHhhcCcCCCceeeeeeccccceeEEEEeecCCCCCCcccc--cccccceEEEeecc
Q 007669 157 NKQKPIWLRKPEEITKEEYASFYKSLTNDWEDHLAVKHFSVEGQLEFKAVLFVPKRAPFDLFDT--RKKMNNIKLYVRRV 234 (594)
Q Consensus 157 N~~~~iW~r~~~evt~eey~~Fyk~l~~~~~~Pl~~ih~~~eg~~~~~~llyiP~~~p~~~~~~--~~~~~~i~LY~rrV 234 (594)
|+++|||+|+|++||+|||.+|||+++++|++||+|+|+++||+++|+||||||+++|+++|.. ...++||+||||||
T Consensus 1 N~~~plW~r~~~eit~eeY~eFYk~l~~~~~~PL~~iH~~veg~~~~~~lLyiP~~ap~d~~~~~~~~~~~~ikLYvrrV 80 (263)
T 1y6z_A 1 GHQLPIWKQDEKSLTENDYYSFYKNTFKAYDDPLAYVHFNVEGQISFNSILYIPGSLPWELSKNMFDEESRGIRLYVKRV 80 (263)
T ss_dssp ----CGGGSCTTSCCHHHHHHHHHHHHTCCSCCSEEEEEEEESSSEEEEEEEECSSCCHHHHHCCC----CCEEEEETTE
T ss_pred CCcCCCcCCCcccCCHHHHHHHHHHhcCCccCcceeEEeccCCccceEEEEEecCCCchhhhhhhhHhhhcCeeEEEeee
Confidence 7889999999999999999999999999999999999999999999999999999999987652 23478999999999
Q ss_pred ccccccccccccccccceeeeeCCCCCCccchhhhcccHHHHHHHHHHHHHHHHHHHHHhh-CHHHHHHHHHHHhhHhhc
Q 007669 235 FIMDNCEELIPEYLGFIKGVVDSDDLPLNISREMLQQNKILKVIRKNLVKKCIEMFNEIAE-NKEDYNKFYDAFSKNLKL 313 (594)
Q Consensus 235 fI~d~~~~lLP~wl~FvrGVVDS~dLpLNvSRE~LQ~~~~l~~I~~~i~kkvl~~L~~la~-d~e~y~~f~~~~~~~lK~ 313 (594)
||||+|++|||+||+||||||||+|||||||||+||+|++|++||+.|++||+++|.++|+ ||++|++||++||.+||+
T Consensus 81 fI~d~~~~llP~yL~FvkGVVDS~DLpLNvSRE~LQ~~~~l~~Irk~l~kkvl~~l~~la~~d~e~y~kf~~~fg~~lK~ 160 (263)
T 1y6z_A 81 FINDKFSESIPRWLTFLRGIVDSENLPLNVGREILQKSKMLSIINKRIVLKSISMMKGLKETGGDKWTKFLNTFGKYLKI 160 (263)
T ss_dssp EEESCGGGGSCGGGTTCEEEEEECC------------CTTHHHHHHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHH
T ss_pred EeecchhhhchHHHHHHeeccccccCCCccchhhhcccHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhHHHcc
Confidence 9999999999999999999999999999999999999999999999999999999999998 899999999999999999
Q ss_pred cccCChhhHHHHhchhcccccCCCCceecHHHHHHhhccCCceEEEEeCCcHHHHhcChhHHHHHHcCceEEeecCCccH
Q 007669 314 GIHEDSQNRAKLADLLRYHSTKSSEEFTSLKDYVTRMKEGQKDIYYITGESKKAVENSPFLERLKKKGYEVLYMVDAIDE 393 (594)
Q Consensus 314 G~~eD~~~~e~l~~LLrf~ss~~~~~~~sL~eYv~rm~~~Q~~IYY~~~~~~~~~~~sp~le~~~~~g~eVL~l~dpiDE 393 (594)
|+++|+.|+++|++||||+||.++++++||+||++||+++|+.|||++|++++++++|||+|.|+++|+|||+|++||||
T Consensus 161 G~~eD~~~~~~l~~lLrf~ss~~~~~~~sL~eYv~rmke~Q~~IyY~t~~~~~~~~~sp~~E~~~~kg~EVL~l~~~iDe 240 (263)
T 1y6z_A 161 GVVEDKENQEEIASLVEFYSINSGDKKTDLDSYIENMKEDQKCIYYISGENKKTAQNSPSLEKLKALNYDVLFSLEPIDE 240 (263)
T ss_dssp HHHHCGGGHHHHHTTCEECBTTTTTSCEEHHHHHHTCCTTCCSEEEEECSSHHHHHTCGGGHHHHHHTCCCEEECSHHHH
T ss_pred ccccCHHHHHHHHHhheeeeccCCCceeeHHHHHHhccCCCceEEEEeCCCHHHHhcCcHHHHHHhCCCeEEEeCCcHHH
Confidence 99999999999999999999987667999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhh--hhccCceeEeccccC
Q 007669 394 YAVGQL--KEYEGKKLVSATKEG 414 (594)
Q Consensus 394 ~~l~~L--~~~~~~~f~~V~~~~ 414 (594)
++|++| ++|+|++|+||++++
T Consensus 241 ~~i~~L~~~e~~gk~~~sv~k~~ 263 (263)
T 1y6z_A 241 FCLSSLTVNKYKGYEVLDVNKAD 263 (263)
T ss_dssp HHHHHHHHHCBTTBCEEETTCC-
T ss_pred HHHHHhhhhccCCceEEecCCCC
Confidence 999999 599999999999873
No 13
>3peh_A Endoplasmin homolog; structural genomics, structural genomics consortium, SGC, HE protein, chaperone, ATP binding; HET: IBD; 2.75A {Plasmodium falciparum 3D7} PDB: 3pej_A*
Probab=100.00 E-value=4.5e-38 Score=320.43 Aligned_cols=149 Identities=44% Similarity=0.785 Sum_probs=124.6
Q ss_pred CCCcccccccccccceeccccCeeEEEeccCCCCeEEEEECCCCceEEEeCCCCCCCCcceEEEEEeccchhhccCHHHH
Q 007669 7 GADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRI 86 (594)
Q Consensus 7 ~~~~~lIGQFGvGFyS~FmVAdkV~V~Srs~~~~~~~W~s~g~g~y~i~~~~~~~~~~~GT~I~L~lk~d~~e~l~~~~i 86 (594)
+.+.++||||||||||||||||+|+|+||++++.+|+|+|+|+|+|+|.++++++..+|||+|+||||+|+.+||++++|
T Consensus 132 ~~d~~~IGqFGVGFySaf~vadkV~V~Sk~~~~~~~~Wes~g~g~fti~~~~~~~~~~~GT~I~L~Lked~~e~le~~~i 211 (281)
T 3peh_A 132 GGDMSLIGQFGVGFYSAFLVADKVIVYTKNNDDEQYIWESTADAKFTIYKDPRGATLKRGTRISLHLKEDATNLLNDKKL 211 (281)
T ss_dssp TCCSTTTTTTTCGGGGGGGTEEEEEEEEECTTSCCEEEEEETTSCEEEEECTTCSTTSSEEEEEEEECGGGGGGGSHHHH
T ss_pred ccccccccccCccchhhccccCEEEEEEecCCCCEEEEEECCCccEEEEEcCCCCCCCCCeEEEEEECCchhhhcCHHHH
Confidence 45678999999999999999999999999998899999999999999998544456799999999999999999999999
Q ss_pred HHHHHHhcCCCCcceEEeeccccccccCCCCCCCc-cccccCCccccchHHhhhccccccceeeeceeeecc
Q 007669 87 KDLVKKHSEFISYPIYLWTEKTTEKEISDDEDDEP-KKEEEGDVEDVDEEKEKEGKKKKKIKEVSHEWQLIN 157 (594)
Q Consensus 87 ~~li~kYs~fi~~PI~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vN 157 (594)
++||+|||+||+|||+|+++++++.+++++++++. +++++++++++++++ +++++|++++++++|+.+|
T Consensus 212 k~ivkkys~fi~~pI~l~~~k~~~~ev~~~~~~~~~~~~~~~~~e~~~~~~--~~~k~k~~~~~~~~~e~~n 281 (281)
T 3peh_A 212 MDLISKYSQFIQFPIYLLHENVYTEEVLADIAKDMVNDPNYDSVKVEETDD--PNKKTRTVEKKVKKWTLMN 281 (281)
T ss_dssp HHHHHHHTTTCCSCEEEEEEEEEEEEEEHHHHHHHTTCTTSSEEEECCCCC--TTCCEEEEEEEEEEEEECC
T ss_pred HHHHHHhhccCCcceEEeeeeeeeeccCcchhhhccccccccccccccccc--cccCCcceEEEEEEeEecC
Confidence 99999999999999999998887777776553221 223455555544332 2346778899999999998
No 14
>1qy5_A Endoplasmin; GRP94, NECA, HSP90, chaperone; HET: NEC; 1.75A {Canis lupus familiaris} SCOP: d.122.1.1 PDB: 1qy8_A* 1qye_A* 1u0y_A* 1yt2_A*
Probab=100.00 E-value=9.4e-34 Score=288.95 Aligned_cols=149 Identities=50% Similarity=0.871 Sum_probs=101.5
Q ss_pred CCcccccccccccceeccccCeeEEEeccCCCCeEEEEECCCCceEEEeCCCCCCCCcceEEEEEeccchhhccCHHHHH
Q 007669 8 ADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIK 87 (594)
Q Consensus 8 ~~~~lIGQFGvGFyS~FmVAdkV~V~Srs~~~~~~~W~s~g~g~y~i~~~~~~~~~~~GT~I~L~lk~d~~e~l~~~~i~ 87 (594)
.+.++|||||||||||||||++|+|+||++++.+|+|+|+| |+|+|..+..+...++||+|+||||+++.+||+.++|+
T Consensus 119 ~d~~~IG~fGvGfySaf~va~~v~V~Sk~~~~~~~~w~s~g-g~~~i~~~~~~~~~~~GT~I~L~Lk~d~~e~le~~~i~ 197 (269)
T 1qy5_A 119 STSELIGQFGVGFYSAFLVADKVIVTSKHNNDTQHIWESDS-NEFSVIADPRGNTLGRGTTITLVLKEEASDYLELDTIK 197 (269)
T ss_dssp CCHHHHHHTTCGGGGGGGTEEEEEEEEECTTSCCEEEEECS-SCEEEEECTTCSCSSSEEEEEEEECGGGGGGGSHHHHH
T ss_pred cchhhcCCccccHHHHhhccceEEEEEEecCCcEEEEEEeC-CEEEEEeccCCCcCCCCeEEEEEEcccchhhhhHHHHH
Confidence 46679999999999999999999999999988899999999 99999974323456899999999999999999999999
Q ss_pred HHHHHhcCCCCcceEEeeccccccccCCCCCCCcc--ccccCCccccchHHhhhccccccceeeeceeeecc
Q 007669 88 DLVKKHSEFISYPIYLWTEKTTEKEISDDEDDEPK--KEEEGDVEDVDEEKEKEGKKKKKIKEVSHEWQLIN 157 (594)
Q Consensus 88 ~li~kYs~fi~~PI~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vN 157 (594)
+||++||+||+|||+|+++++.+++++++++++.+ ++++++.++++++++++++++|++++++++|+.+|
T Consensus 198 ~lvkkys~fi~~PI~l~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~~~e~~n 269 (269)
T 1qy5_A 198 NLVKKYSQFINFPIYVWSSKTETVEEPMEEEEAAKEEKEDSDDEAAVEEEEEEKKPKTKKVEKTVWDWELMN 269 (269)
T ss_dssp HHHHTTCTTCSSCEEEEEECC-----------------------------------------CCCEEEEECC
T ss_pred HHHHhhhcccceeeEEeeeeeeeeccCccchhhhhhcccccccccccccccccccccCCceEEEEeeeEecC
Confidence 99999999999999999988776666655533211 11111111111111122356778888899999998
No 15
>3ied_A Heat shock protein; HSP90, chaperone, structural genomics, structura genomics consortium, SGC, stress response; HET: AN2; 2.01A {Plasmodium falciparum}
Probab=99.98 E-value=5.9e-33 Score=277.57 Aligned_cols=102 Identities=50% Similarity=0.869 Sum_probs=91.6
Q ss_pred cccCC-CCcccccccccccceeccccCeeEEEeccCCCCeEEEEECCCCceEEEeCC-----CCCCCCcceEEEEEeccc
Q 007669 3 ALQAG-ADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDV-----SGEPLGRGTKMTLYLKED 76 (594)
Q Consensus 3 ~l~~~-~~~~lIGQFGvGFyS~FmVAdkV~V~Srs~~~~~~~W~s~g~g~y~i~~~~-----~~~~~~~GT~I~L~lk~d 76 (594)
+++++ .+.++||||||||||||||||+|+|+|| +++++|+|+|+|+|+|+|.++. .++..+|||+|+||||+|
T Consensus 164 ~l~~~~~d~~~IGqFGVGFySaFmVAdkV~V~Sk-~dd~~~~WeS~g~gsfti~~~~~~~~~~g~~~~~GT~I~L~Lked 242 (272)
T 3ied_A 164 QIEEGKADSNLIGQFGVGFYSSFLVSNRVEVYTK-KEDQIYRWSSDLKGSFSVNEIKKYDQEYDDIKGSGTKIILHLKEE 242 (272)
T ss_dssp HHHTTSSCTTCGGGSCCGGGGGGGTEEEEEEEEE-SSSCEEEEEECSSSEEEEEECTTCTTCC--CCSSEEEEEEEECGG
T ss_pred HhhcccccccccCcccceeheeeccCCEEEEEEc-CCCceEEEEECCCCCEEEEECcccccccCCCCCCCcEEEEEECCC
Confidence 44444 5678999999999999999999999999 7789999999999999999843 234679999999999999
Q ss_pred hhhccCHHHHHHHHHHhcCCCCcceEEee
Q 007669 77 QLEYLEERRIKDLVKKHSEFISYPIYLWT 105 (594)
Q Consensus 77 ~~e~l~~~~i~~li~kYs~fi~~PI~l~~ 105 (594)
+.+||++++|++||+|||+||+|||+||+
T Consensus 243 ~~e~le~~~ik~likkys~fi~~PI~l~~ 271 (272)
T 3ied_A 243 CDEYLEDYKLKELIKKYSEFIKFPIEIWS 271 (272)
T ss_dssp GGGGGSHHHHHHHHHHHCTTCCSCEEECC
T ss_pred hHHhcCHHHHHHHHHHHHhCCCCCeEEEe
Confidence 99999999999999999999999999985
No 16
>3nmq_A Heat shock protein HSP 90-beta; ATPase, chaperone-chaperone inhibitor complex; HET: 7PP; 2.20A {Homo sapiens} SCOP: d.122.1.1
Probab=99.97 E-value=1.3e-32 Score=274.96 Aligned_cols=105 Identities=79% Similarity=1.224 Sum_probs=95.5
Q ss_pred cccCCCCcccccccccccceeccccCeeEEEeccCCCCeEEEEECCCCceEEEeCCCCCCCCcceEEEEEeccchhhccC
Q 007669 3 ALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLE 82 (594)
Q Consensus 3 ~l~~~~~~~lIGQFGvGFyS~FmVAdkV~V~Srs~~~~~~~W~s~g~g~y~i~~~~~~~~~~~GT~I~L~lk~d~~e~l~ 82 (594)
+++.+.+.++||||||||||||||||+|+|+||++++++|+|+|+|+|+|+|.++ .++..+|||+|+||||+|+.+||+
T Consensus 120 ~~~~~~d~~~IGqFGvGfySaf~vadkv~V~Sk~~~~~~~~W~s~~~g~fti~~~-~~~~~~~GT~I~L~lk~d~~e~l~ 198 (239)
T 3nmq_A 120 ALQAGADISMIGQFGVGFYSAYLVAEKVVVITKHNDDEQYAWESSAGGSFTVRAD-HGEPIGRGTKVILHLKEDQTEYLE 198 (239)
T ss_dssp HHHTTCCGGGGGGGTCGGGGGGGTEEEEEEEEECTTSCCEEEEECSTTEEEEEEC-CSSCCSSEEEEEEEECGGGGGGGS
T ss_pred hhcccCCcccccccCcccccccccCCEEEEEEeeCCCceeEEEECCCCcEEEEec-CCCcCCCCCEEEEEECCChHHhcC
Confidence 3444456789999999999999999999999999988999999999999999984 345679999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCcceEEeeccc
Q 007669 83 ERRIKDLVKKHSEFISYPIYLWTEKT 108 (594)
Q Consensus 83 ~~~i~~li~kYs~fi~~PI~l~~~~~ 108 (594)
+++|++||+|||+||+|||+|+++++
T Consensus 199 ~~~i~~lv~kys~fi~~pI~~~~~~~ 224 (239)
T 3nmq_A 199 ERRVKEVVKKHSQFIGYPITLYLEKE 224 (239)
T ss_dssp HHHHHHHHHHHCTTCSSCEEECCCSC
T ss_pred HHHHHHHHHHHHhccCCceEEeeeee
Confidence 99999999999999999999997654
No 17
>1sf8_A Chaperone protein HTPG; four helix bundle dimerization interface, exposed amphipathic helix, three stranded beta sheet; 2.60A {Escherichia coli} SCOP: d.271.1.1
Probab=99.97 E-value=5.2e-32 Score=245.79 Aligned_cols=115 Identities=26% Similarity=0.458 Sum_probs=104.3
Q ss_pred HHHHHHHHHHhCCceeEEEEeecCCCCCeEEEeCCCcccHHHHHHHHHHhhcCCCcccccCCCceEEeCCCChHHHHHHH
Q 007669 436 ENLCKTMKDILGDRVEKVVVSDRIVDSPCCLVTGEYGWSANMERIMKAQALRDNSMSSYMSSKKTMEINPDNGIMEELRK 515 (594)
Q Consensus 436 ~~L~~~lk~~L~~~V~~V~vs~rL~dsPa~lv~~e~g~s~~Merimkaq~~~~~~~~~~~~~k~~LEINp~HpLIk~L~~ 515 (594)
..|++|+|++|+++|.+|++|+||+++|||||++++|||++|||||++|++ +++..+++|||||+||||++|.+
T Consensus 11 ~~~~~~~K~~L~dkV~~V~vS~RL~~sPa~lv~~e~g~s~~Merimka~~~------~~~~~k~~LEINp~HplIk~L~~ 84 (126)
T 1sf8_A 11 GSFIDRVKALLGERVKDVRLTHRLTDTPAIVSTDADEMSTQMAKLFAAAGQ------KVPEVKYIFELNPDHVLVKRAAD 84 (126)
T ss_dssp -CHHHHHHHHHGGGSSEEEECCCCSSCCEEEECCTTSCCHHHHHHHHTTTS------CCCCCCCEEEECTTSHHHHHHHH
T ss_pred hHHHHHHHHHhcCcccEEEEeecccCCCEEEEecCcccCHHHHHHHHHhcc------ccccCCeeeeECCCCHHHHHHHH
Confidence 458999999999999999999999999999999999999999999999864 23457899999999999999976
Q ss_pred hhhccCCchhHHHHHHHHhHHHHHhCCCCCCCHHHHHHHHHHHHH
Q 007669 516 RAEADKNDKSVKDLTMLLFETALLTSGFSLDDPNTFGSRIHRMLK 560 (594)
Q Consensus 516 ~~~~~~~~e~~~~~~~~Lyd~AlL~~G~~l~d~~~f~~r~~~lL~ 560 (594)
.. +++.++++|++|||+|+|++|++++||+.|++|+|+||.
T Consensus 85 ~~----~~~~~k~l~~lLyd~AlL~~G~~leDp~~F~~Ri~~ll~ 125 (126)
T 1sf8_A 85 TE----DEAKFSEWVELLLDQALLAERGTLEDPNLFIRRMNQLLV 125 (126)
T ss_dssp CC----SHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHHHHHHH
T ss_pred hc----ChHHHHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHh
Confidence 32 256799999999999999999999999999999999985
No 18
>3o0i_A HSP90AA1 protein; HSP90 heat-shock proteins, chaperone-inhibitor complex; HET: P54; 1.47A {Homo sapiens} PDB: 2fwz_A* 2fwy_A* 2h55_A*
Probab=99.95 E-value=6.2e-28 Score=243.51 Aligned_cols=108 Identities=77% Similarity=1.219 Sum_probs=92.0
Q ss_pred CCCcccccccccccceeccccCeeEEEeccCCCCeEEEEECCCCceEEEeCCCCCCCCcceEEEEEeccchhhccCHHHH
Q 007669 7 GADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRI 86 (594)
Q Consensus 7 ~~~~~lIGQFGvGFyS~FmVAdkV~V~Srs~~~~~~~W~s~g~g~y~i~~~~~~~~~~~GT~I~L~lk~d~~e~l~~~~i 86 (594)
+.+.+.||||||||||+|||||+|+|+||++++.+|+|+|+|+|.|+|.++ .+...++||+|+||||++..+|++.++|
T Consensus 145 ~~~~~~iG~fG~Gf~S~f~Vadkv~V~Sr~~~~~g~~w~s~gg~~~~v~~~-~~~~~~~GT~I~l~LK~~~~e~~e~~~I 223 (256)
T 3o0i_A 145 GADISMIGQFGVGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTD-TGEPMGRGTKVILHLKEDQTEYLEERRI 223 (256)
T ss_dssp TCCGGGGGGGTCGGGGGGGTEEEEEEEEECTTSCEEEEEECSTTEEEEEEC-CSSCCSSEEEEEEEECGGGGGGGCHHHH
T ss_pred cCCccccCCCcchHHHhhccCCeEEEEEcCCCCceEEEEEeccceEEEeeC-CCCCCCCCcEEEEEEcCcchhhccHHHH
Confidence 346689999999999999999999999999888899999999999999983 2355689999999999999999999999
Q ss_pred HHHHHHhcCCCCcceEEeeccccccccCC
Q 007669 87 KDLVKKHSEFISYPIYLWTEKTTEKEISD 115 (594)
Q Consensus 87 ~~li~kYs~fi~~PI~l~~~~~~~~~~~~ 115 (594)
++||+|||+||+|||+|+.++++++++++
T Consensus 224 ~~iv~k~s~~l~~PI~~~~~~~~~~~~~~ 252 (256)
T 3o0i_A 224 KEIVKKHSQFIGYPITLFVEKERDKEVSD 252 (256)
T ss_dssp HHHHHHHCTTCSSCEEECCC---------
T ss_pred HHHHHHHHhhCCCCeEEeeeeeecccCCC
Confidence 99999999999999999987665554443
No 19
>3t0h_A Heat shock protein HSP 90-alpha; chaperone, ATPase; 1.20A {Homo sapiens} SCOP: d.122.1.1 PDB: 3r4m_A 3t0z_A* 3t10_A* 3t1k_A* 3t2s_A* 1uyl_A 1uy7_A* 1uy8_A* 1uy9_A* 1uyc_A* 1uyd_A* 1uye_A* 1uyf_A* 1uyg_A* 1uyh_A* 1uyk_A* 1uy6_A 2cdd_A* 2uwd_A* 2vci_A* ...
Probab=99.94 E-value=6.3e-27 Score=233.38 Aligned_cols=106 Identities=75% Similarity=1.182 Sum_probs=91.0
Q ss_pred CCcccccccccccceeccccCeeEEEeccCCCCeEEEEECCCCceEEEeCCCCCCCCcceEEEEEeccchhhccCHHHHH
Q 007669 8 ADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIK 87 (594)
Q Consensus 8 ~~~~lIGQFGvGFyS~FmVAdkV~V~Srs~~~~~~~W~s~g~g~y~i~~~~~~~~~~~GT~I~L~lk~d~~e~l~~~~i~ 87 (594)
.+.+.|||||+||||+|||||+|+|+||++++.+|+|+|+|+|.|+|.+ +++...++||+|+||||+++.+|++.++|+
T Consensus 118 ~~~~~iG~fG~G~~S~~~vad~v~V~Sr~~~~~~~~w~~~g~~~~~v~~-~~~~~~~~GT~I~v~Lk~~~~E~~e~~~i~ 196 (228)
T 3t0h_A 118 ADISMIGQFGVGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRT-DTGEPMGRGTKVILHLKEDQTEYLEERRIK 196 (228)
T ss_dssp CCGGGGGGGTCGGGGGGGTEEEEEEEEECTTSCEEEEEECSTTEEEEEE-CCSSCCSSEEEEEEEECGGGGGGGSHHHHH
T ss_pred CCcccCCCCChhHHHHhccCCEEEEEEecCCCCcEEEEEcCCceEEEee-cCCCCCCCCcEEEEEECCchhhhhhHHHHH
Confidence 4567999999999999999999999999988889999999999999997 323456899999999999999999999999
Q ss_pred HHHHHhcCCCCcceEEeeccccccccC
Q 007669 88 DLVKKHSEFISYPIYLWTEKTTEKEIS 114 (594)
Q Consensus 88 ~li~kYs~fi~~PI~l~~~~~~~~~~~ 114 (594)
++|++||+||+|||+|+.+++++.+++
T Consensus 197 ~iv~~~a~~l~~Pi~~~~~~~~~~~~~ 223 (228)
T 3t0h_A 197 EIVKKHSQFIGYPITLFVEKERDKEVS 223 (228)
T ss_dssp HHHHHHSTTCSSCEEECCC--------
T ss_pred HHHHHHHhhCCCCeEEeecceeeccCC
Confidence 999999999999999998765444443
No 20
>2gqp_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, ligand, NECA, NPCA, adenosine; HET: PA7 PG4 1PE; 1.50A {Canis lupus familiaris} SCOP: d.122.1.1 PDB: 1tc0_A* 1tbw_A* 1u0z_A* 1u2o_A* 1ysz_A* 1yt0_A* 1yt1_A* 2exl_A* 2fyp_A* 2gfd_A* 1tc6_A* 2h8m_A* 2hch_A* 2hg1_A* 3o2f_A* 2esa_A*
Probab=99.93 E-value=1.5e-26 Score=232.17 Aligned_cols=99 Identities=58% Similarity=1.016 Sum_probs=88.8
Q ss_pred CCcccccccccccceeccccCeeEEEeccCCCCeEEEEECCCCceEEEeCCCCCCCCcceEEEEEeccchhhccCHHHHH
Q 007669 8 ADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIK 87 (594)
Q Consensus 8 ~~~~lIGQFGvGFyS~FmVAdkV~V~Srs~~~~~~~W~s~g~g~y~i~~~~~~~~~~~GT~I~L~lk~d~~e~l~~~~i~ 87 (594)
.+..+||||||||||+||||++|+|+||++++.+|+|+++| |.|+|.+...+...++||+|+||||+++.+|++.++|+
T Consensus 123 ~d~~~iG~fGiG~~S~f~va~~v~V~Sr~~~~~~~~w~~~g-g~~~i~~~~~~~~~~~GT~I~l~Lk~~~~~~le~~~i~ 201 (236)
T 2gqp_A 123 STSELIGQFGVGFYSAFLVADKVIVTSKHNNDTQHIWESDS-NEFSVIADPRGNTLGRGTTITLVLKEEASDYLELDTIK 201 (236)
T ss_dssp -CHHHHHHTTCGGGGGGGTEEEEEEEEECTTSCCEEEEESS-SCEEEEECTTCSCSSSEEEEEEEECGGGGGGGCHHHHH
T ss_pred cchhhcCCCCcchhhHhhcCCEEEEEEeCCCCceEEEEEeC-CEEEEEeccCCCCCCCCeEEEEEECCcchhhChHHHHH
Confidence 45579999999999999999999999999877899999999 99999874322346899999999999999999999999
Q ss_pred HHHHHhcCCCCcceEEeecc
Q 007669 88 DLVKKHSEFISYPIYLWTEK 107 (594)
Q Consensus 88 ~li~kYs~fi~~PI~l~~~~ 107 (594)
++|++||+||+|||+|++++
T Consensus 202 ~lv~~~s~~i~~pI~~~~~~ 221 (236)
T 2gqp_A 202 NLVKKYSQFINFPIYVWSSK 221 (236)
T ss_dssp HHHHHHHTTCSSCEEEEEEC
T ss_pred HHHHHHhhhCCCceEEeeee
Confidence 99999999999999998643
No 21
>1yc1_A HSP 86, heat shock protein HSP 90-alpha; cell-cycle, cancer, drug design, cell cycle; HET: 4BC; 1.70A {Homo sapiens} SCOP: d.122.1.1 PDB: 1yc3_A* 1yc4_A*
Probab=99.91 E-value=4.5e-25 Score=224.61 Aligned_cols=101 Identities=78% Similarity=1.235 Sum_probs=91.0
Q ss_pred CCCcccccccccccceeccccCeeEEEeccCCCCeEEEEECCCCceEEEeCCCCCCCCcceEEEEEeccchhhccCHHHH
Q 007669 7 GADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRI 86 (594)
Q Consensus 7 ~~~~~lIGQFGvGFyS~FmVAdkV~V~Srs~~~~~~~W~s~g~g~y~i~~~~~~~~~~~GT~I~L~lk~d~~e~l~~~~i 86 (594)
+.+...|||||||||||||||++|+|+||++++.+|.|+++|+|.|+|.+.+ +...++||+|+|+||++..+|++.++|
T Consensus 153 ~~d~~~iG~fGiGf~S~f~va~~v~V~Sr~~~~~~~~w~~~~~~~~~i~~~~-~~~~~~GT~I~l~Lk~~~~e~~e~~~i 231 (264)
T 1yc1_A 153 GADISMIGQFGVGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDT-GEPMGRGTKVILHLKEDQTEYLEERRI 231 (264)
T ss_dssp TCCGGGGGGGTCGGGGHHHHEEEEEEEEECTTSCCEEEEECSTTEEEEEECC-SSCCSSEEEEEEEECGGGGGGGSHHHH
T ss_pred ccchhhcCCCCCCccccccCCCEEEEEEecCCCceEEEEEcCCceEEEeecC-CCCCCCCeEEEEEECCchhhhhhHHHH
Confidence 3456799999999999999999999999998878999999999999998732 234689999999999999999999999
Q ss_pred HHHHHHhcCCCCcceEEeeccc
Q 007669 87 KDLVKKHSEFISYPIYLWTEKT 108 (594)
Q Consensus 87 ~~li~kYs~fi~~PI~l~~~~~ 108 (594)
+++|++||.||+|||+|+.+++
T Consensus 232 ~~lv~k~s~fi~~PI~~~~~~~ 253 (264)
T 1yc1_A 232 KEIVKKHSQFIGYPITLFVEKE 253 (264)
T ss_dssp HHHHHHHTTTCSSCEEECCCC-
T ss_pred HHHHHHHHhhCCCCEEEeeccc
Confidence 9999999999999999987554
No 22
>2wer_A ATP-dependent molecular chaperone HSP82; ATPase, ATP-binding, phosphoprotein, stress respo nucleotide-binding; HET: RDC; 1.60A {Saccharomyces cerevisiae} PDB: 2weq_A* 2wep_A* 1zwh_A* 1zw9_A* 2fxs_A* 3c11_A* 3c0e_A* 2yge_A* 2ygf_A* 2akp_A
Probab=99.90 E-value=3e-24 Score=213.15 Aligned_cols=101 Identities=70% Similarity=1.140 Sum_probs=90.9
Q ss_pred CCCcccccccccccceeccccCeeEEEeccCCCCeEEEEECCCCceEEEeCCCCCCCCcceEEEEEeccchhhccCHHHH
Q 007669 7 GADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRI 86 (594)
Q Consensus 7 ~~~~~lIGQFGvGFyS~FmVAdkV~V~Srs~~~~~~~W~s~g~g~y~i~~~~~~~~~~~GT~I~L~lk~d~~e~l~~~~i 86 (594)
+.+...|||||||||||||||++|+|+||++++.+|.|+++++|.|++.+.......++||+|+|+||++..+|++.++|
T Consensus 111 ~~~~~~iG~fGiG~~s~~~~~~~v~v~S~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~GT~I~l~Lk~~~~~~~e~~~i 190 (220)
T 2wer_A 111 GADVSMIGQFGVGFYSLFLVADRVQVISKSNDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKDDQLEYLEEKRI 190 (220)
T ss_dssp TCCGGGGGGGTCGGGGGGGTEEEEEEEEECTTSCCEEEEECSSSEEEEEECSSSCCCSSEEEEEEEECTTCGGGGCHHHH
T ss_pred cCCcccCCccchhHHHhhhcCCeeEEEEecCCCceeEEEeCCCCceEeecccCCCCCCCCeEEEEEECcchHHhCCHHHH
Confidence 34667999999999999999999999999988789999999999999987321234589999999999999999999999
Q ss_pred HHHHHHhcCCCCcceEEeecc
Q 007669 87 KDLVKKHSEFISYPIYLWTEK 107 (594)
Q Consensus 87 ~~li~kYs~fi~~PI~l~~~~ 107 (594)
+++|++||.||++||+++.++
T Consensus 191 ~~~v~~~a~~l~~PI~~~~~~ 211 (220)
T 2wer_A 191 KEVIKRHSEFVAYPIQLVVTK 211 (220)
T ss_dssp HHHHHHHCTTCCSCEEECCCC
T ss_pred HHHHHHHHhcCCCceEEEecc
Confidence 999999999999999998754
No 23
>2ior_A Chaperone protein HTPG; heat shock protein, HSP90; HET: ADP; 1.65A {Escherichia coli}
Probab=99.82 E-value=1.7e-20 Score=188.05 Aligned_cols=92 Identities=39% Similarity=0.757 Sum_probs=85.1
Q ss_pred cccccccccccceeccccCeeEEEeccCC---CCeEEEEECCCCceEEEeCCCCCCCCcceEEEEEeccchhhccCHHHH
Q 007669 10 VSMIGQFGVGFYSAYLVAERVVVTTKHND---DEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRI 86 (594)
Q Consensus 10 ~~lIGQFGvGFyS~FmVAdkV~V~Srs~~---~~~~~W~s~g~g~y~i~~~~~~~~~~~GT~I~L~lk~d~~e~l~~~~i 86 (594)
.++|||||+|||||||+|++|+|+||+.+ ..+|.|++++++.|++.+ . ...++||+|+|+||++..+|++.++|
T Consensus 137 ~~~iG~fGiG~~S~~~~~~~v~V~Sr~~~~~~~~~~~w~~~~~~~~~i~~-~--~~~~~GT~V~v~Lk~~~~~~~e~~~i 213 (235)
T 2ior_A 137 SQLIGQFGVGFYSAFIVADKVTVRTRAAGEKPENGVFWESAGEGEYTVAD-I--TKEDRGTEITLHLREGEDEFLDDWRV 213 (235)
T ss_dssp HHHHTTCCCCGGGGGGTEEEEEEEEECTTSCGGGEEEEEECSSSEEEEEE-E--CCCSCEEEEEEEECTTCGGGGCHHHH
T ss_pred cccCCCCChhHHHHHhCcCeEEEEEecCCCCCceeEEEEecCCCcEEEee-C--CCCCCCEEEEEEEcCchhhhCCHHHH
Confidence 46999999999999999999999999974 569999999999999987 3 23489999999999999999999999
Q ss_pred HHHHHHhcCCCCcceEEe
Q 007669 87 KDLVKKHSEFISYPIYLW 104 (594)
Q Consensus 87 ~~li~kYs~fi~~PI~l~ 104 (594)
+++|++||.||++||+|+
T Consensus 214 ~~lv~~ya~~l~~PI~~~ 231 (235)
T 2ior_A 214 RSIISKYSDHIALPVEIE 231 (235)
T ss_dssp HHHHHHHTTSCCSCEEEC
T ss_pred HHHHHHHhccCCCCeEec
Confidence 999999999999999997
No 24
>1b63_A MUTL; DNA mismatch repair, ATPase; HET: ANP; 1.90A {Escherichia coli K12} SCOP: d.14.1.3 d.122.1.2 PDB: 1nhh_A* 1nhi_A* 1bkn_A 1nhj_A* 1b62_A*
Probab=98.85 E-value=3.4e-09 Score=111.14 Aligned_cols=186 Identities=13% Similarity=0.171 Sum_probs=113.1
Q ss_pred ccccccccccceeccccCeeEEEeccCCC-CeEEEEECCCC-ceEEEeCCCCCCCCcceEEEEE------------eccc
Q 007669 11 SMIGQFGVGFYSAYLVAERVVVTTKHNDD-EQYIWESQAGG-SFTVTRDVSGEPLGRGTKMTLY------------LKED 76 (594)
Q Consensus 11 ~lIGQFGvGFyS~FmVAdkV~V~Srs~~~-~~~~W~s~g~g-~y~i~~~~~~~~~~~GT~I~L~------------lk~d 76 (594)
..+|+||+|++|+++|| +|+|+||+.++ .+|.|.++|.. .+++.+ + ..++||+|+++ +|..
T Consensus 92 ~~~G~~G~gl~si~~vs-~l~v~s~~~~~~~~~~~~~~g~~~~~~~~~-~---~~~~GT~V~v~~Lf~n~P~r~kflk~~ 166 (333)
T 1b63_A 92 ISLGFRGEALASISSVS-RLTLTSRTAEQQEAWQAYAEGRDMNVTVKP-A---AHPVGTTLEVLDLFYNTPARRKFLRTE 166 (333)
T ss_dssp CSSCCSSCHHHHHHTTS-EEEEEEECTTCSSEEEEEEETTTTEEEEEE-E---CCCSEEEEEEESTTTTCHHHHHTCCCH
T ss_pred cccCccccchhhhhcCC-cEEEEEecCCCceEEEEEEcCCcceEeeec-c---cCCCCCEEEEecccccchhhhhhhccH
Confidence 36899999999999999 89999999754 58899888876 566655 2 23799999998 3443
Q ss_pred hhhccCHHHHHHHHHHhcCCCC-cceEEeeccccccccCCCCCCCccccccCCccccchHHhhhccccccceeeeceeee
Q 007669 77 QLEYLEERRIKDLVKKHSEFIS-YPIYLWTEKTTEKEISDDEDDEPKKEEEGDVEDVDEEKEKEGKKKKKIKEVSHEWQL 155 (594)
Q Consensus 77 ~~e~l~~~~i~~li~kYs~fi~-~PI~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (594)
..+| .+|++++++|+-.-| .-+.+...+
T Consensus 167 ~~e~---~~i~~~~~~~al~~p~v~~~l~~ng------------------------------------------------ 195 (333)
T 1b63_A 167 KTEF---NHIDEIIRRIALARFDVTINLSHNG------------------------------------------------ 195 (333)
T ss_dssp HHHH---HHHHHHHHHHHHHCTTCEEEEEETT------------------------------------------------
T ss_pred HHHH---HHHHHHHHHHhccCCCcEEEEEECC------------------------------------------------
Confidence 3343 899999999995322 113332110
Q ss_pred cccCCCCccCCCCCCCHHHHHHHHHHhhcC-cCCCceeeeeeccccceeEEEEeecCCCCCCccccccc-ccceEEEeec
Q 007669 156 INKQKPIWLRKPEEITKEEYASFYKSLTND-WEDHLAVKHFSVEGQLEFKAVLFVPKRAPFDLFDTRKK-MNNIKLYVRR 233 (594)
Q Consensus 156 vN~~~~iW~r~~~evt~eey~~Fyk~l~~~-~~~Pl~~ih~~~eg~~~~~~llyiP~~~p~~~~~~~~~-~~~i~LY~rr 233 (594)
+++|.-++. .+...+.++...+++. ....+..++...+ .+.+.|.+-.|.... .. +..+-+|+|+
T Consensus 196 ----~~~~~~~~~-~~~~~~~~~i~~i~G~~~~~~li~i~~~~~-~~~v~G~i~~p~~~~-------~~~~~~~~~fvNg 262 (333)
T 1b63_A 196 ----KIVRQYRAV-PEGGQKERRLGAICGTAFLEQALAIEWQHG-DLTLRGWVADPNHTT-------PALAEIQYCYVNG 262 (333)
T ss_dssp ----EEEEEECCC-CTTCCTHHHHHHHHCHHHHHHEEEEEEEET-TEEEEEEEECGGGCC-------TTGGGCEEEEETT
T ss_pred ----EEEEecCCC-CCCchHHHHHHHHhChhhHhheEEEEecCC-CEEEEEEEEcCcccc-------CCCCCcEEEEECC
Confidence 011111110 0111234555666652 2223334444333 477888777677432 12 4568999999
Q ss_pred ccccccc---------ccccccc---cccceeeeeCCCCCCccc
Q 007669 234 VFIMDNC---------EELIPEY---LGFIKGVVDSDDLPLNIS 265 (594)
Q Consensus 234 VfI~d~~---------~~lLP~w---l~FvrGVVDS~dLpLNvS 265 (594)
.+|.+.. ..+||.- ..++..-+|...+=.||.
T Consensus 263 R~V~~~~l~~ai~~~y~~~l~~~~~P~~~l~l~~~p~~vDvNvh 306 (333)
T 1b63_A 263 RMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVDVNVH 306 (333)
T ss_dssp EECCCHHHHHHHHHHHHHHSSSCCCCCEEEEEECCGGGEECTTS
T ss_pred EEecCHHHHHHHHHHHHhhccCCCCcEEEEEEEeCchhccceEC
Confidence 9997632 1334421 235566677777777773
No 25
>1h7s_A PMS1 protein homolog 2; DNA repair, GHL ATPase, mismatch repair, HNPCC; 1.95A {Homo sapiens} SCOP: d.14.1.3 d.122.1.2 PDB: 1h7u_A* 1ea6_A*
Probab=98.25 E-value=7.9e-07 Score=94.29 Aligned_cols=82 Identities=17% Similarity=0.182 Sum_probs=63.5
Q ss_pred ccccccccceeccccCeeEEEeccCC-CCeEEEEECCCCceEEEeCCCCCCCCcceEEEEE-eccc----hhhcc-----
Q 007669 13 IGQFGVGFYSAYLVAERVVVTTKHND-DEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLY-LKED----QLEYL----- 81 (594)
Q Consensus 13 IGQFGvGFyS~FmVAdkV~V~Srs~~-~~~~~W~s~g~g~y~i~~~~~~~~~~~GT~I~L~-lk~d----~~e~l----- 81 (594)
+|++|+|++|+++|| +|+|+||+.+ ..+|.|+.+++|.+.... + ...++||+|+++ |-.. -++|+
T Consensus 104 ~G~rG~gl~si~~vs-~v~v~t~~~~~~~~~~~~~~~~G~~~~~~-~--~~~~~GT~V~v~~LF~n~P~R~k~flk~~~~ 179 (365)
T 1h7s_A 104 FGFRGEALSSLCALS-DVTISTCHASAKVGTRLMFDHNGKIIQKT-P--YPRPRGTTVSVQQLFSTLPVRHKEFQRNIKK 179 (365)
T ss_dssp ESSSSSHHHHHHHHS-EEEEEEECTTCSSCEEEEECTTSCEEEEE-E--CCCCSEEEEEEESTTTTSHHHHHHHHHTHHH
T ss_pred cCCCCchhhhhhhhc-cEEEEEccCCCcceEEEEEcCCCceEeec-c--cCCCCCcEEEEeecccccchhhhhhccchHH
Confidence 799999999999999 9999999875 459999999888876544 2 234799999997 3211 12254
Q ss_pred CHHHHHHHHHHhcCCCC
Q 007669 82 EERRIKDLVKKHSEFIS 98 (594)
Q Consensus 82 ~~~~i~~li~kYs~fi~ 98 (594)
+..+|.+++++|+-+-|
T Consensus 180 e~~~i~~~v~~~al~~p 196 (365)
T 1h7s_A 180 EYAKMVQVLHAYCIISA 196 (365)
T ss_dssp HHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHhhhhhhhcCC
Confidence 35899999999997654
No 26
>3h4l_A DNA mismatch repair protein PMS1; ATP binding, DNA repair, DNA damage, nucleus, phosphop DNA binding protein, protein binding; HET: DNA ANP; 2.50A {Saccharomyces cerevisiae}
Probab=98.16 E-value=1.1e-06 Score=93.25 Aligned_cols=79 Identities=15% Similarity=0.171 Sum_probs=64.0
Q ss_pred cccccccccceeccccCeeEEEeccCCCCeEEEEECCCCceEEEeCCCCCCCCcceEEEE-------------Eeccchh
Q 007669 12 MIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTL-------------YLKEDQL 78 (594)
Q Consensus 12 lIGQFGvGFyS~FmVAdkV~V~Srs~~~~~~~W~s~g~g~y~i~~~~~~~~~~~GT~I~L-------------~lk~d~~ 78 (594)
-.|.+|+|++|.++|| +|+|+||..+..+|+|+.+++|.+.....+ ..++||+|++ ++|....
T Consensus 94 t~GfrGeaL~Si~avS-~l~V~sr~~~~~~~~~~~~~~G~~~~~~~~---~~~~GTtV~v~~LF~n~P~R~k~flk~~~~ 169 (367)
T 3h4l_A 94 TLGFRGEALSSLCGIA-KLSVITTTSPPKADKLEYDMVGHITSKTTT---SRNKGTTVLVSQLFHNLPVRQKEFSKTFKR 169 (367)
T ss_dssp EEEETTHHHHHHHHSS-EEEEEEESSTTCEEEEEECTTCCEEEEEEE---CCSSEEEEEEESTTTTCHHHHHHHHTTHHH
T ss_pred ccCccchHHHHhhccC-EEEEEEEECCCCEEEEEEcCCCcEEeeccc---cCCCCeEEEEchhhccCchhhhhhccchHH
Confidence 3588899999999999 799999987778999999988887654422 3479999999 5676665
Q ss_pred hccCHHHHHHHHHHhcCCC
Q 007669 79 EYLEERRIKDLVKKHSEFI 97 (594)
Q Consensus 79 e~l~~~~i~~li~kYs~fi 97 (594)
+| .+|+++|++|+-.-
T Consensus 170 e~---~~i~~~l~~~Al~~ 185 (367)
T 3h4l_A 170 QF---TKCLTVIQGYAIIN 185 (367)
T ss_dssp HH---HHHHHHHHHHHHHC
T ss_pred HH---HHHHHHHHHHHhhC
Confidence 65 69999999998653
No 27
>3na3_A DNA mismatch repair protein MLH1; MUTL protein homolog 1, DNA damag repair, structural genomics consortium, SGC, protein bindin; HET: DNA ATP; 2.50A {Homo sapiens}
Probab=97.65 E-value=0.00016 Score=76.11 Aligned_cols=76 Identities=29% Similarity=0.311 Sum_probs=58.1
Q ss_pred cccccccccceeccccCeeEEEeccCC-CCeEEEEECCCCce--EEEeCCCCCCCCcceEEEEE------------eccc
Q 007669 12 MIGQFGVGFYSAYLVAERVVVTTKHND-DEQYIWESQAGGSF--TVTRDVSGEPLGRGTKMTLY------------LKED 76 (594)
Q Consensus 12 lIGQFGvGFyS~FmVAdkV~V~Srs~~-~~~~~W~s~g~g~y--~i~~~~~~~~~~~GT~I~L~------------lk~d 76 (594)
-.|.+|+|++|...|| +|+|+||..+ ..+|.|+.++ |.. .+.+ + ..++||+|++. ||..
T Consensus 97 s~GfrGeaL~Si~avs-~l~v~sr~~~~~~~~~~~~~~-G~~~~~~~~-~---~~~~GTtV~v~~LF~n~P~R~k~lk~~ 170 (348)
T 3na3_A 97 TYGFRGEALASISHVA-HVTITTKTADGKCAYRASYSD-GKLKAPPKP-C---AGNQGTQITVEDLFYNIATRRKALKNP 170 (348)
T ss_dssp --CCTTCHHHHHHHSS-EEEEEEECTTCSSEEEEEEET-TEESSCCEE-E---CCCSEEEEEEESTTTTCHHHHHTSCCH
T ss_pred cCCcCChHHHHhhccc-EEEEEEEECCCCceEEEEEeC-CEEeeeeeE-e---cCCCCcEEEECcccccCchhhhhcccc
Confidence 4699999999999999 8999999975 4799999986 443 2333 2 23799999994 5655
Q ss_pred hhhccCHHHHHHHHHHhcCC
Q 007669 77 QLEYLEERRIKDLVKKHSEF 96 (594)
Q Consensus 77 ~~e~l~~~~i~~li~kYs~f 96 (594)
..+| ++|++++++|+-.
T Consensus 171 ~~e~---~~i~~~l~~~Al~ 187 (348)
T 3na3_A 171 SEEY---GKILEVVGRYSVH 187 (348)
T ss_dssp HHHH---HHHHHHHHHHHHH
T ss_pred HHHH---HHHHHHHHHHHhh
Confidence 5444 8999999999854
No 28
>1mu5_A Type II DNA topoisomerase VI subunit B; GHKL ATPase, helix two-turns helix; 2.00A {Sulfolobus shibatae} SCOP: a.156.1.3 d.14.1.3 d.122.1.2 PDB: 1mx0_A* 1z5b_A* 1z5a_A* 1z59_A* 1z5c_A* 2hkj_A*
Probab=95.44 E-value=0.01 Score=64.86 Aligned_cols=81 Identities=17% Similarity=0.232 Sum_probs=57.9
Q ss_pred ccccccccccceeccccCe-----eEEEeccCCCC-eEEEE----EC--CCCceEEEeCCCCCCCCcceEEEEEeccchh
Q 007669 11 SMIGQFGVGFYSAYLVAER-----VVVTTKHNDDE-QYIWE----SQ--AGGSFTVTRDVSGEPLGRGTKMTLYLKEDQL 78 (594)
Q Consensus 11 ~lIGQFGvGFyS~FmVAdk-----V~V~Srs~~~~-~~~W~----s~--g~g~y~i~~~~~~~~~~~GT~I~L~lk~d~~ 78 (594)
...|.+|+|+++|..+++. |.|.|+..++. .+.|+ -. ++..++..+ ......++||+|+++++.+..
T Consensus 104 ~~~gg~GLGL~iv~~l~~~~gG~~i~v~S~~~~g~~~~~~~Lpl~~~~~~g~~~~~~~-~~~~~~~~GT~V~v~l~~~~~ 182 (471)
T 1mu5_A 104 QTRGMYGLGVKAAVLYSQMHQDKPIEIETSPVNSKRIYTFKLKIDINKNEPIIVERGS-VENTRGFHGTSVAISIPGDWP 182 (471)
T ss_dssp CCSCSCTTTHHHHHHHHHHHCCCCEEEEEECTTCSEEEEEEEEECTTTCCEEEEEEEE-EECCTTCCEEEEEEEEECCHH
T ss_pred cCCCCceeeHHHHHHHHHHhCCCceeEEEecCCCceEEEEEEeccccccCCccccccc-ccCCCCCCCEEEEEEEcCCcc
Confidence 4568899999999999997 99999876544 66665 11 333444433 211134799999999987654
Q ss_pred hccCHHHHHHHHHHhc
Q 007669 79 EYLEERRIKDLVKKHS 94 (594)
Q Consensus 79 e~l~~~~i~~li~kYs 94 (594)
++ ..+|.+++++|+
T Consensus 183 e~--~~~I~~~l~~~a 196 (471)
T 1mu5_A 183 KA--KSRIYEYIKRTY 196 (471)
T ss_dssp HH--HHHHHHHHHHHH
T ss_pred hH--HHHHHHHHHHHH
Confidence 44 268999999998
No 29
>1kij_A DNA gyrase subunit B; topoisomerase, gyrase B-coumarin complex, isomerase; HET: DNA NOV; 2.30A {Thermus thermophilus} SCOP: d.14.1.3 d.122.1.2
Probab=95.07 E-value=0.013 Score=62.41 Aligned_cols=78 Identities=21% Similarity=0.235 Sum_probs=55.5
Q ss_pred cccccccccceeccccCeeEEEeccCCCCeEEEEECCC-CceEEEeCCCCCC--CCcceEEEEEeccchhhc----cCHH
Q 007669 12 MIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAG-GSFTVTRDVSGEP--LGRGTKMTLYLKEDQLEY----LEER 84 (594)
Q Consensus 12 lIGQFGvGFyS~FmVAdkV~V~Srs~~~~~~~W~s~g~-g~y~i~~~~~~~~--~~~GT~I~L~lk~d~~e~----l~~~ 84 (594)
-.|.+|+|++++..+|++++|.|+..+ ..|..+-.++ ....+.. . +.. .++||+|++. ||..-| ++..
T Consensus 109 s~G~~G~Gls~v~als~~~~v~t~~~g-~~~~~~~~~G~~~~~~~~-~-~~~~~~~~GT~V~f~--Pd~~~F~~~~~~~~ 183 (390)
T 1kij_A 109 SGGLHGVGASVVNALSEWTVVEVFREG-KHHRIAFSRGEVTEPLRV-V-GEAPRGKTGTRVTFK--PDPEIFGNLRFDPS 183 (390)
T ss_dssp CSCSSTTSHHHHHHTEEEEEEEEEETT-EEEEEEEETTEEEEEEEE-E-EECGGGCCEEEEEEE--ECHHHHTTCCCCHH
T ss_pred cCCCCCcceeeecccccceEEEEecCC-cEEEEEEcCCccccccee-e-ccccCCCCCcEEEEE--EChHHhCCccccHH
Confidence 468999999999999999999999654 4455444432 2333433 1 111 3699999986 555545 5678
Q ss_pred HHHHHHHHhc
Q 007669 85 RIKDLVKKHS 94 (594)
Q Consensus 85 ~i~~li~kYs 94 (594)
+|.+.++.|+
T Consensus 184 ~l~~rl~~~A 193 (390)
T 1kij_A 184 KIRARLREVA 193 (390)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhc
Confidence 9999999998
No 30
>2zbk_B Type 2 DNA topoisomerase 6 subunit B; DNA binding protein, decatenation, ATPase, drug design, DNA-binding, magnesium, metal-binding; HET: RDC; 3.56A {Sulfolobus shibatae}
Probab=94.72 E-value=0.019 Score=63.53 Aligned_cols=82 Identities=17% Similarity=0.222 Sum_probs=56.9
Q ss_pred ccccccccccceeccccC-----eeEEEeccCCCC-eEEEE----EC--CCCceEEEeCCCCCCCCcceEEEEEeccchh
Q 007669 11 SMIGQFGVGFYSAYLVAE-----RVVVTTKHNDDE-QYIWE----SQ--AGGSFTVTRDVSGEPLGRGTKMTLYLKEDQL 78 (594)
Q Consensus 11 ~lIGQFGvGFyS~FmVAd-----kV~V~Srs~~~~-~~~W~----s~--g~g~y~i~~~~~~~~~~~GT~I~L~lk~d~~ 78 (594)
.-.|.+|+|+++|..+++ ++.|.|+..++. .+.|+ .. ++......+ ......++||+|+++++.+..
T Consensus 103 ~~~gg~GLGLsiv~~l~~~~gG~~I~V~S~~~~g~~~~~~~Lpl~~~~~~g~~~~~~~-~~~~~~~~GT~V~v~l~~~~~ 181 (530)
T 2zbk_B 103 QTRGMYGLGVKAAVLYSQMHQDKPIEIETSPVNSKRIYTFKLKIDINKNEPIIVERGS-VENTRGFHGTSVAISIPGDWP 181 (530)
T ss_dssp CCSCSSSSHHHHHHHHHHHHCCCCEEEEEECTTCSEEEEEEEEEETTTTEEEEEEEEE-EECCSSCCEEEEEEEEECCHH
T ss_pred cCCCCccchHHHHHHHHHHhCCCceEEEEecCCCeEEEEEEEEecccccCCccccccc-cCCCCCCCCcEEEEEeccchh
Confidence 356899999999999999 799999876544 55555 11 222333333 111124799999999987654
Q ss_pred hccCHHHHHHHHHHhcC
Q 007669 79 EYLEERRIKDLVKKHSE 95 (594)
Q Consensus 79 e~l~~~~i~~li~kYs~ 95 (594)
++ ..+|.+++++|+-
T Consensus 182 e~--~~~i~~~l~~~Al 196 (530)
T 2zbk_B 182 KA--KSRIYEYIKRTYI 196 (530)
T ss_dssp HH--HHHHHHHHHHHHH
T ss_pred hH--HHHHHHHHHHHHH
Confidence 44 3789999999874
No 31
>2q2e_B Type 2 DNA topoisomerase 6 subunit B; DNA-binding, SPO11, ATPase; 4.00A {Methanosarcina mazei}
Probab=91.48 E-value=0.05 Score=61.27 Aligned_cols=88 Identities=22% Similarity=0.237 Sum_probs=59.7
Q ss_pred ccccccccceeccccCe-----eEEEeccCCC-CeEEEE-----ECCCCceEEEeCCCCCCCCcceEEEEEeccchhhcc
Q 007669 13 IGQFGVGFYSAYLVAER-----VVVTTKHNDD-EQYIWE-----SQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYL 81 (594)
Q Consensus 13 IGQFGvGFyS~FmVAdk-----V~V~Srs~~~-~~~~W~-----s~g~g~y~i~~~~~~~~~~~GT~I~L~lk~d~~e~l 81 (594)
-|.+|+|+++|..+++. ++|.|+..++ .++.|+ +.|.+........ ....++||+|+++++. +|.
T Consensus 110 ~Gg~GlGLsiv~~ls~~~gG~~I~V~S~~~gg~~g~~~~~~lp~~~g~~~~~~~~~~-~~~~~~GT~V~~~f~~---~~~ 185 (621)
T 2q2e_B 110 RGQQGIGISAAVLYAQMTAGRHTKILSKTSPTAPAHYYELMINTSTNEPDILVDEVR-DWFRPHGTQIELEMRA---AYV 185 (621)
T ss_dssp CSSSSHHHHHHHHHHHHHTCCCCEEEEECSSSSCEEEEECCCCSSSCSCCCCCEEEC-CCSCSSCCCEEEECSC---CCC
T ss_pred CCCceechhhhhHHHHHhCCCceeEEeeccCCccceEEEEecchhcccccccccccc-cCCCCCCCEEEEEecC---ccc
Confidence 48899999999999999 5999987643 677777 4555554222111 1224799999999873 355
Q ss_pred C--HHHHHHHHHHhcCCCC-cceEEe
Q 007669 82 E--ERRIKDLVKKHSEFIS-YPIYLW 104 (594)
Q Consensus 82 ~--~~~i~~li~kYs~fi~-~PI~l~ 104 (594)
. ...|.++++.|+-.-| .-|.+.
T Consensus 186 ~~~~~~I~~~L~~lAllnpgv~I~L~ 211 (621)
T 2q2e_B 186 KGRRQSIYEYLKATAIVNPHARITLI 211 (621)
T ss_dssp CCSSSSSHHHHHHHHHHCCSCEEEEC
T ss_pred hHHHHHHHHHHHHHHhhCCCCEEEEE
Confidence 5 3778888888874432 334443
No 32
>3fv5_A DNA topoisomerase 4 subunit B; topoisomerase IV B subunit complex, antibiotic resistance, ATP-binding, nucleotide-binding; HET: DNA 1EU; 1.80A {Escherichia coli} PDB: 1s14_A*
Probab=88.75 E-value=0.33 Score=46.83 Aligned_cols=89 Identities=17% Similarity=0.241 Sum_probs=51.4
Q ss_pred cccccccccceeccccCeeEEEeccCCCCeEEEEECCCCce--EEEeCCCCCCCCcceEEEEEeccchhhc----cCHHH
Q 007669 12 MIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSF--TVTRDVSGEPLGRGTKMTLYLKEDQLEY----LEERR 85 (594)
Q Consensus 12 lIGQFGvGFyS~FmVAdkV~V~Srs~~~~~~~W~s~g~g~y--~i~~~~~~~~~~~GT~I~L~lk~d~~e~----l~~~~ 85 (594)
-.|.-|+|.-|+-.||++++|.|+..+ ..|.-+-. .|.- .+.........++||+|+.. |+-+.| ++..+
T Consensus 94 s~GfrGeglssinalS~~l~v~t~~~g-~~~~~~~~-~G~~~~~~~~~g~~~~~~~GT~V~f~--Pdr~~F~~~~~e~~~ 169 (201)
T 3fv5_A 94 SGGLHGVGISVVNALSKRVEVNVRRDG-QVYNIAFE-NGEKVQDLQVVGTCGKRNTGTSVHFW--PDETFFDSPRFSVSR 169 (201)
T ss_dssp --------CHHHHHTEEEEEEEEEETT-EEEEEEEE-TTEEEEEEEEEEECCTTCCEEEEEEE--ECGGGSSCCCCCHHH
T ss_pred cCcccceecchhhcccceEEEEEEecC-ceEEEEEe-CCEEcccceecccCCCCCCCeEEEEE--ECHHHcCCCccCHHH
Confidence 368889999999999999999999754 33443333 2432 22210000113699999996 444433 67799
Q ss_pred HHHHHHHhcCCCC-cceEEe
Q 007669 86 IKDLVKKHSEFIS-YPIYLW 104 (594)
Q Consensus 86 i~~li~kYs~fi~-~PI~l~ 104 (594)
|.++++.|+-.-| .-|.|.
T Consensus 170 i~~~l~~lA~l~pgv~~~l~ 189 (201)
T 3fv5_A 170 LTHVLKAKAVLCPGVEITFK 189 (201)
T ss_dssp HHHHHHHHHHHSTTCEEEEE
T ss_pred HHHHHHHHHHhCCCCEEEEE
Confidence 9999999984322 455555
No 33
>1s16_A Topoisomerase IV subunit B; two-domain protein complexed with ADPNP; HET: ANP; 2.10A {Escherichia coli} SCOP: d.14.1.3 d.122.1.2
Probab=78.77 E-value=1.9 Score=45.66 Aligned_cols=89 Identities=17% Similarity=0.238 Sum_probs=57.5
Q ss_pred ccccccccceeccccCeeEEEeccCCCCeEEEEECCC-CceEEEeCCCCCCCCcceEEEEEeccchhhc----cCHHHHH
Q 007669 13 IGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAG-GSFTVTRDVSGEPLGRGTKMTLYLKEDQLEY----LEERRIK 87 (594)
Q Consensus 13 IGQFGvGFyS~FmVAdkV~V~Srs~~~~~~~W~s~g~-g~y~i~~~~~~~~~~~GT~I~L~lk~d~~e~----l~~~~i~ 87 (594)
-|.-|+|.-|+=.+|.+++|.|+..+ ..|.-+-.++ ..-.+........-++||+|+.. ||..-| ++...|.
T Consensus 109 gGl~GvGls~vnalS~~l~v~~~r~g-~~~~~~~~~G~~~~~~~~~g~~~~~~~GT~V~f~--Pd~~~F~~~~~e~~~l~ 185 (390)
T 1s16_A 109 GGLHGVGISVVNALSKRVEVNVRRDG-QVYNIAFENGEKVQDLQVVGTCGKRNTGTSVHFW--PDETFFDSPRFSVSRLT 185 (390)
T ss_dssp SCCSSCHHHHHHHTEEEEEEEEEETT-EEEEEEEETTEEEEEEEEEEECCTTCCEEEEEEE--ECGGGSSCCSCCHHHHH
T ss_pred CCccccchHHHHHhhcccEEEEEECC-cEEEEEEeCCcccccceecccccCCCCceEEEEE--ECccccCcccccHHHHH
Confidence 58899999999999999999998643 4454444432 11112220000111689999987 554445 6788999
Q ss_pred HHHHHhcCCC-CcceEEe
Q 007669 88 DLVKKHSEFI-SYPIYLW 104 (594)
Q Consensus 88 ~li~kYs~fi-~~PI~l~ 104 (594)
+.++.++-.- ..-|.|.
T Consensus 186 ~rl~~lA~lnpgv~i~l~ 203 (390)
T 1s16_A 186 HVLKAKAVLCPGVEITFK 203 (390)
T ss_dssp HHHHHHHHHSTTCEEEEE
T ss_pred HHHHHHHhcCCCcEEEEE
Confidence 9999997543 2445554
No 34
>4duh_A DNA gyrase subunit B; structure-based drug design, antibacterial, DNA gyrase B, GY isomerase-isomerase inhibitor complex; HET: DNA RLI; 1.50A {Escherichia coli} PDB: 1aj6_A* 1kzn_A* 3g7e_A*
Probab=59.13 E-value=4.4 Score=39.49 Aligned_cols=87 Identities=15% Similarity=0.190 Sum_probs=51.9
Q ss_pred cccccccccceeccccCeeEEEeccCCCCeEEEEEC-CCCceEEEeCCCCCCCCcceEEEEEeccchhhc-----cCHHH
Q 007669 12 MIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQ-AGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEY-----LEERR 85 (594)
Q Consensus 12 lIGQFGvGFyS~FmVAdkV~V~Srs~~~~~~~W~s~-g~g~y~i~~~~~~~~~~~GT~I~L~lk~d~~e~-----l~~~~ 85 (594)
--|.-|||.=++=-+|++.+|.++..+ ..|.-+.. |.....+.. . +...++||+|+.. ||..-| ++.+.
T Consensus 112 SgGlhGvG~svvNAlS~~l~v~v~r~g-~~~~~~f~~G~~~~~l~~-~-g~~~~~GT~V~F~--Pd~~~F~~~~~~~~~~ 186 (220)
T 4duh_A 112 SGGLHGVGVSVVNALSQKLELVIQREG-KIHRQIYEHGVPQAPLAV-T-GETEKTGTMVRFW--PSLETFTNVTEFEYEI 186 (220)
T ss_dssp -----CCCHHHHHHTEEEEEEEEEETT-EEEEEEEETTEESSSCEE-E-EECSCCEEEEEEE--ECTTTCCSSCSCCHHH
T ss_pred ccCccceecchhcccccceEEEEEECC-EEEEEEecCCcCcCCcee-c-cccCCCCcEEEEE--ECHHHhCCcccCCHHH
Confidence 458889999999999999999998754 33332222 211111111 0 1123799999986 454444 45588
Q ss_pred HHHHHHHhcCCCC--cceEEe
Q 007669 86 IKDLVKKHSEFIS--YPIYLW 104 (594)
Q Consensus 86 i~~li~kYs~fi~--~PI~l~ 104 (594)
|.+.++.++ |+. .-|.|.
T Consensus 187 l~~rlrelA-~ln~gv~i~l~ 206 (220)
T 4duh_A 187 LAKRLRELS-FLNSGVSIRLR 206 (220)
T ss_dssp HHHHHHHHH-HHCTTSEEEEE
T ss_pred HHHHHHHHH-hcCCCCEEEEE
Confidence 999999998 554 455554
No 35
>4emv_A DNA topoisomerase IV, B subunit; protein-inhibitor complex, ATP binding, structure-based drug antimicrobial, virtual screen; HET: DNA 0R9; 1.70A {Streptococcus pneumoniae GA47373} PDB: 4em7_A*
Probab=58.17 E-value=16 Score=35.70 Aligned_cols=89 Identities=16% Similarity=0.180 Sum_probs=56.4
Q ss_pred cccccccccceeccccCeeEEEeccCCCCeEEEEECCC----CceE-EEeCCCCCCCCcceEEEEEeccch--hhccCHH
Q 007669 12 MIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAG----GSFT-VTRDVSGEPLGRGTKMTLYLKEDQ--LEYLEER 84 (594)
Q Consensus 12 lIGQFGvGFyS~FmVAdkV~V~Srs~~~~~~~W~s~g~----g~y~-i~~~~~~~~~~~GT~I~L~lk~d~--~e~l~~~ 84 (594)
--|.-|||.=++=.++.+.+|.++..+ ..|.-+-..+ +.-. +.. + ...++||+|+...-+.- ..=++.+
T Consensus 116 SgGlhGvG~svvNALS~~l~v~v~r~g-~~~~q~f~~Gg~~~~~l~~ig~-~--~~~~~GT~V~F~PD~~iF~~~~~~~~ 191 (226)
T 4emv_A 116 SGGLHGVGSSVVNALSSWLEVEITRDG-AVYKQRFENGGKPVTTLKKIGT-A--LKSKTGTKVTFMPDATIFSTTDFKYN 191 (226)
T ss_dssp --CGGGCCHHHHHHTEEEEEEEEEETT-EEEEEEEETTTEESSCSEEEEE-C--CTTCCEEEEEEEECTTTCSCCCCCHH
T ss_pred ccccccccchhhhhcccceEEEEEeCC-cEEEEEECCCCEEcCCceEecc-c--CCCCCCeEEEEEECHHHcCCCCcCHH
Confidence 458889999999999999999998754 3344333332 1111 222 2 11379999998654331 1126788
Q ss_pred HHHHHHHHhcCCCC--cceEEee
Q 007669 85 RIKDLVKKHSEFIS--YPIYLWT 105 (594)
Q Consensus 85 ~i~~li~kYs~fi~--~PI~l~~ 105 (594)
.|.+.++.++ |+. .-|.|..
T Consensus 192 ~l~~rlrelA-~ln~gv~i~l~d 213 (226)
T 4emv_A 192 TISERLNESA-FLLKNVTLSLTD 213 (226)
T ss_dssp HHHHHHHHHH-HHHCSCEEEEEE
T ss_pred HHHHHHHHHh-hcCCCCEEEEEe
Confidence 9999999998 443 4566653
No 36
>1ei1_A DNA gyrase B, GYRB; ATPase domain, dimer, isomerase; HET: DNA ANP; 2.30A {Escherichia coli} SCOP: d.14.1.3 d.122.1.2
Probab=55.65 E-value=11 Score=39.96 Aligned_cols=85 Identities=16% Similarity=0.178 Sum_probs=55.9
Q ss_pred cccccccccceeccccCeeEEEeccCCCCeEEEEECCCCc----eEEEeCCCCCCCCcceEEEEEeccchhhc-----cC
Q 007669 12 MIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGS----FTVTRDVSGEPLGRGTKMTLYLKEDQLEY-----LE 82 (594)
Q Consensus 12 lIGQFGvGFyS~FmVAdkV~V~Srs~~~~~~~W~s~g~g~----y~i~~~~~~~~~~~GT~I~L~lk~d~~e~-----l~ 82 (594)
--|.-|+|.-|+=.+|.+++|.|+..+ ..|.-+-.+ |. -.+.. ...++||+|+.. ||..-| ++
T Consensus 111 SgGl~GvGls~vnalS~~l~v~~~r~g-~~~~~~~~~-G~~~~~l~~~~----~~~~~GT~V~f~--Pd~~~F~~~~~~e 182 (391)
T 1ei1_A 111 SGGLHGVGVSVVNALSQKLELVIQREG-KIHRQIYEH-GVPQAPLAVTG----ETEKTGTMVRFW--PSLETFTNVTEFE 182 (391)
T ss_dssp CSCCSSCHHHHHHHTEEEEEEEEEETT-EEEEEEEET-TEESSCCEEEE----ECSCCEEEEEEE--ECTTTCCSCCSCC
T ss_pred cCCccccchHHHHHhcCeEEEEEEeCC-cEEEEEEcC-Ccccccceecc----CcCCCccEEEEE--EChhhhCCccccC
Confidence 348899999999999999999998644 444444332 21 11111 113799999987 444334 35
Q ss_pred HHHHHHHHHHhcCCC-CcceEEe
Q 007669 83 ERRIKDLVKKHSEFI-SYPIYLW 104 (594)
Q Consensus 83 ~~~i~~li~kYs~fi-~~PI~l~ 104 (594)
...|.+.++.++-.- ..-|.|.
T Consensus 183 ~~~l~~rlr~lA~lnpgv~i~l~ 205 (391)
T 1ei1_A 183 YEILAKRLRELSFLDSGVSIRLR 205 (391)
T ss_dssp HHHHHHHHHHHHHHSTTCEEEEE
T ss_pred HHHHHHHHHHhcccCCCcEEEEE
Confidence 789999999987543 2445554
No 37
>1zxm_A TOPO IIA ATPase, DNA topoisomerase II, alpha isozyme; GHKL nucleotide-binding fold; HET: DNA ANP; 1.87A {Homo sapiens} PDB: 1zxn_A*
Probab=52.90 E-value=11 Score=39.96 Aligned_cols=80 Identities=11% Similarity=-0.002 Sum_probs=50.0
Q ss_pred cccccccccceeccccCeeEEEeccC-CCCeEEEEECCCCc-eEEEeCCCCCCCCcceEEEEEeccchhhc----cCHHH
Q 007669 12 MIGQFGVGFYSAYLVAERVVVTTKHN-DDEQYIWESQAGGS-FTVTRDVSGEPLGRGTKMTLYLKEDQLEY----LEERR 85 (594)
Q Consensus 12 lIGQFGvGFyS~FmVAdkV~V~Srs~-~~~~~~W~s~g~g~-y~i~~~~~~~~~~~GT~I~L~lk~d~~e~----l~~~~ 85 (594)
--|.-|||.=|+=.++.+++|.|+.. +...|.-+-.+++. -.... ......++||+|+..+ |..-| ++.+.
T Consensus 131 SgGlhGvGlsvVnAlS~~l~v~v~~~~~g~~~~~~~~~G~~~~~~~~-ig~~~~~~GT~V~F~P--d~~iF~~~ef~~~~ 207 (400)
T 1zxm_A 131 TGGRNGYGAKLCNIFSTKFTVETASREYKKMFKQTWMDNMGRAGEME-LKPFNGEDYTCITFQP--DLSKFKMQSLDKDI 207 (400)
T ss_dssp CSCCSSCHHHHHHHTEEEEEEEEEETTTTEEEEEEEETTTTEECCCE-EEECCSCCEEEEEEEE--CGGGGTCSSCCHHH
T ss_pred cCCccccceeeeEEeccceEEEEecCCCCcEEEEEEccCccccCcce-eccCCCCCccEEEEEE--ChHHhCceeecHHH
Confidence 45889999999999999999999874 44455544433322 11111 0001125899999884 44444 34555
Q ss_pred ---HHHHHHHhc
Q 007669 86 ---IKDLVKKHS 94 (594)
Q Consensus 86 ---i~~li~kYs 94 (594)
|.+.++.++
T Consensus 208 ~~~l~~rlrelA 219 (400)
T 1zxm_A 208 VALMVRRAYDIA 219 (400)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 667788776
No 38
>3cwv_A DNA gyrase, B subunit, truncated; structural genomics, unknown function, B-subunit binding, isomerase, nucleotide-binding, topoisomerase; HET: DNA; 1.95A {Myxococcus xanthus}
Probab=50.00 E-value=21 Score=37.28 Aligned_cols=84 Identities=12% Similarity=0.117 Sum_probs=53.2
Q ss_pred cccccceeccccCeeEEEeccCCCCeEEEEECCCCce-----EEEeC-CCCCCCCcceEEEEEeccchhhc----cCHHH
Q 007669 16 FGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSF-----TVTRD-VSGEPLGRGTKMTLYLKEDQLEY----LEERR 85 (594)
Q Consensus 16 FGvGFyS~FmVAdkV~V~Srs~~~~~~~W~s~g~g~y-----~i~~~-~~~~~~~~GT~I~L~lk~d~~e~----l~~~~ 85 (594)
-| |.-|+=.||.+++|.|+..+ ..|..+-.+ |.- .+.+. ..+...++||+|+.. ||..-| ++...
T Consensus 99 sG-Gls~vnalSs~l~v~t~r~g-~~~~~~~~~-G~~~~~~~~~~~l~~~g~~~~~GT~V~f~--Pd~~~F~~~~~e~~~ 173 (369)
T 3cwv_A 99 DS-MLVVSLALSSRYQVDIWADG-RQWRVMGEH-GHPQGEGAAVTPMEPMPVSAERGVRVHFV--PDATIFEVLAFDRAR 173 (369)
T ss_dssp TS-SHHHHHHTEEEEEEEEEETT-EEEEEEEET-TEECTTCEEESSCCCCSSCCSEEEEEEEE--ECTTTCSCCCCCHHH
T ss_pred cC-HHHHHHHhhceEEEEEEECC-CEEEEEEeC-CcccccccccCCceEecccCCCCCEEEEE--ECHHHhCCccccHHH
Confidence 35 88888888999999999754 355555443 321 02210 011224799999987 555555 67889
Q ss_pred HHHHHHHhcCCC-CcceEEe
Q 007669 86 IKDLVKKHSEFI-SYPIYLW 104 (594)
Q Consensus 86 i~~li~kYs~fi-~~PI~l~ 104 (594)
|.+.++.++-.- ..-|.+.
T Consensus 174 l~~rl~~lA~lnpgv~i~l~ 193 (369)
T 3cwv_A 174 LSRRCNELAALAPGLRVSFA 193 (369)
T ss_dssp HHHHHHHHHHHSTTCEEEEE
T ss_pred HHHHHHHHcCcCCCcEEEEE
Confidence 999999998432 2344444
No 39
>3lnu_A Topoisomerase IV subunit B; PARE, ATP-binding, nucleotide-BI topoisomerase; 2.20A {Xanthomonas oryzae PV} PDB: 3lps_A*
Probab=35.67 E-value=20 Score=38.03 Aligned_cols=87 Identities=17% Similarity=0.289 Sum_probs=50.9
Q ss_pred cccccccccceeccccCeeEEEeccCCCCeEEEEEC-CCC--ceE-EEeCCCCCCCCcceEEEEEeccchhhc----cCH
Q 007669 12 MIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQ-AGG--SFT-VTRDVSGEPLGRGTKMTLYLKEDQLEY----LEE 83 (594)
Q Consensus 12 lIGQFGvGFyS~FmVAdkV~V~Srs~~~~~~~W~s~-g~g--~y~-i~~~~~~~~~~~GT~I~L~lk~d~~e~----l~~ 83 (594)
--|.-|||.=++=.++.+.+|.++..+ ..|.-+.. |.. .-. |.. + ..-++||+|+.. ||..-| ++.
T Consensus 127 SgGlhGvG~svVNALS~~l~v~v~rdG-k~~~q~f~~G~~~~~l~~ig~-~--~~~~~GT~V~F~--PD~~iF~~~~f~~ 200 (408)
T 3lnu_A 127 SGGLHGVGVSVVNALSTKVELFIKREG-SEHRMEFRDGNAASKLEVVGT-V--GKKNTGTRLRFW--ADPKYFDTPKFNV 200 (408)
T ss_dssp -------CHHHHHHTEEEEEEEEEETT-EEEEEEEETTEECSCCEEEEE-C--CTTCCEEEEEEE--ECGGGSSCSCCCH
T ss_pred cCCccccccceehhccCeEEEEEEECC-EEEEEEECCCEECCCceEecc-C--cCCCCCcEEEEE--ECHHHhCCCCcCH
Confidence 357789999999999999999998654 33432322 211 111 222 1 113699999986 444444 677
Q ss_pred HHHHHHHHHhcCCC-CcceEEe
Q 007669 84 RRIKDLVKKHSEFI-SYPIYLW 104 (594)
Q Consensus 84 ~~i~~li~kYs~fi-~~PI~l~ 104 (594)
+.|.+.++.++-.. ..-|.|.
T Consensus 201 ~~l~~rlrelA~Ln~Gv~I~l~ 222 (408)
T 3lnu_A 201 RALRHLLRAKAVLCPGLTVKLH 222 (408)
T ss_dssp HHHHHHHHHHHHHSTTCEEEEE
T ss_pred HHHHHHHHHHHhhcCCCEEEEE
Confidence 89999999987433 2456655
No 40
>3ttz_A DNA gyrase subunit B; protein-inhibitor complex, ATP-binding, structure-based drug antimicrobial, isomerase-isomerase inhibitor complex; HET: DNA 07N; 1.63A {Staphylococcus aureus} PDB: 3u2d_A* 3u2k_A* 3g75_A* 3g7b_A*
Probab=33.23 E-value=30 Score=32.86 Aligned_cols=73 Identities=16% Similarity=0.269 Sum_probs=44.0
Q ss_pred ccCeeEEEeccCCCCeEEEEEC-CCCceEEEeCCCCCCCCcceEEEEEeccchhhc-----cCHHHHHHHHHHhcCCCC-
Q 007669 26 VAERVVVTTKHNDDEQYIWESQ-AGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEY-----LEERRIKDLVKKHSEFIS- 98 (594)
Q Consensus 26 VAdkV~V~Srs~~~~~~~W~s~-g~g~y~i~~~~~~~~~~~GT~I~L~lk~d~~e~-----l~~~~i~~li~kYs~fi~- 98 (594)
++.+.+|.|+..+ ..|.-+.. |.....+.. . +...++||+|+.+ ||..-| ++...|.+.++.|+ |+.
T Consensus 99 LS~~l~v~v~r~g-~~~~~~f~~G~~~~~l~~-i-~~~~~~GT~V~F~--Pd~~iF~~~~~~~~~~l~~rlrelA-~ln~ 172 (198)
T 3ttz_A 99 LSQDLEVYVHRNE-TIYHQAYKKGVPQFDLKE-V-GTTDKTGTVIRFK--ADGEIFTETTVYNYETLQQRIRELA-FLNK 172 (198)
T ss_dssp TEEEEEEEEEETT-EEEEEEEETTEESSCCEE-E-EECSCCEEEEEEE--ECTTTCCSCCCCCHHHHHHHHHHHH-HHST
T ss_pred hcCeEEEEEEECC-cEEEEEEeCCEECCCcee-c-cCCCCCCcEEEEE--ECHHHhccCCccCHHHHHHHHHHHh-hcCC
Confidence 3578889988654 34443333 211111111 0 1123799999986 565667 67899999999998 554
Q ss_pred -cceEEe
Q 007669 99 -YPIYLW 104 (594)
Q Consensus 99 -~PI~l~ 104 (594)
.-|.|.
T Consensus 173 gv~i~l~ 179 (198)
T 3ttz_A 173 GIQITLR 179 (198)
T ss_dssp TCEEEEE
T ss_pred CCEEEEE
Confidence 445554
No 41
>3bma_A D-alanyl-lipoteichoic acid synthetase; structural genomics, D-alanyl-lipoteichoic acid biosynthesis structure initiative, PSI-2; 2.24A {Streptococcus pneumoniae}
Probab=27.12 E-value=97 Score=32.82 Aligned_cols=150 Identities=10% Similarity=0.235 Sum_probs=85.1
Q ss_pred ccccccccceeeeeCCCCCCccchh----hhcccHHHHHHHHHHHHHHHHH---------HHHHhh-CH-----HHHHHH
Q 007669 243 LIPEYLGFIKGVVDSDDLPLNISRE----MLQQNKILKVIRKNLVKKCIEM---------FNEIAE-NK-----EDYNKF 303 (594)
Q Consensus 243 lLP~wl~FvrGVVDS~dLpLNvSRE----~LQ~~~~l~~I~~~i~kkvl~~---------L~~la~-d~-----e~y~~f 303 (594)
|=|.|.. +.=|+.+.+..+.|=. .|++... ...++.+.+|++++ +++++. .+ ..|.+|
T Consensus 106 iSPQWF~--k~G~~~~aF~~~fS~~q~~~fl~n~~~-~~~k~~~AkRll~~~~~~~l~~~~~~ia~~~~~~~~~~~~l~~ 182 (407)
T 3bma_A 106 ISPQWFS--KNGYDPAAFQQYFNGDQLTSFLKHQSG-DQASQYAATRLLQQFPNVAMKDLVQKLASKEELSTADNEMIEL 182 (407)
T ss_dssp CCGGGCC--SSCSCHHHHTTTCCHHHHHHHHHHCCS-SHHHHHHHHHHHHHCTTCTTHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred ECccccC--CCCCChHHHHhhCCHHHHHHHHhCCCC-cHHHHHHHHHHHHhCCcHHHHHHHHHHhcCCCccHHHHHHHHH
Confidence 5599976 7888899999999855 3455555 77889999999887 344432 11 112222
Q ss_pred HHHHh---hHhh--ccccC-------------------ChhhHHHHh-chhcccccCCCCceec-------HHHHHHhhc
Q 007669 304 YDAFS---KNLK--LGIHE-------------------DSQNRAKLA-DLLRYHSTKSSEEFTS-------LKDYVTRMK 351 (594)
Q Consensus 304 ~~~~~---~~lK--~G~~e-------------------D~~~~e~l~-~LLrf~ss~~~~~~~s-------L~eYv~rm~ 351 (594)
....- -.++ .++.. |.....++| +.-.-.|+.+ .=.+. +..-+.+++
T Consensus 183 ~~~~l~~~d~~~s~~~~~~~~~~~~~i~~~~~~lp~~~dw~~l~~~A~~~g~~~t~nN-~f~I~n~yy~k~ik~~~~~~K 261 (407)
T 3bma_A 183 LARFNERQASFFGQFSVRGYVNYDKHVAKYLKILPDQFSYQAIEDVVKADAEKNTSNN-EMGMENYFYNEQIKKDLKKLK 261 (407)
T ss_dssp HHHHHHHHHHHHTTSCCTTTTHHHHHTTTTTTTSCSSCCHHHHHHHHHHHHHHTTCSC-SSSCCHHHHHHHTGGGHHHHT
T ss_pred HHHHHHhhHHHhhhcccCCccccccccCchhccCCCCCCHHHHHHHHHHHHHHhCCCC-ccccchHHHHHHHHHHHHHhc
Confidence 11110 0011 11100 111111111 1112233322 11122 111133455
Q ss_pred cCCceEEEEeCCcHHHHhcChhHHHHHHcCceEEeecCCccHHHHHh
Q 007669 352 EGQKDIYYITGESKKAVENSPFLERLKKKGYEVLYMVDAIDEYAVGQ 398 (594)
Q Consensus 352 ~~Q~~IYY~~~~~~~~~~~sp~le~~~~~g~eVL~l~dpiDE~~l~~ 398 (594)
-.|+..-|..++.+..+. =.|..|++.|.+|||.--|+-.-|...
T Consensus 262 ~~~k~~~y~~SpEy~Dlq--l~L~~~k~~~~~vlfVi~PVNgkWydy 306 (407)
T 3bma_A 262 DSQKSFTYLKSPEYNDLQ--LVLTQFSKSKVNPIFIIPPVNKKWMDY 306 (407)
T ss_dssp TTTTTCCCSSCTHHHHHH--HHHHHHHHTTCEEEEEECCCCHHHHHH
T ss_pred CcccCCCcccCccHHHHH--HHHHHHHHcCCceEEEEeCCchHHHHh
Confidence 678888888777666664 378889999999999999999977765
Done!