BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007673
(593 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224063493|ref|XP_002301171.1| predicted protein [Populus trichocarpa]
gi|222842897|gb|EEE80444.1| predicted protein [Populus trichocarpa]
Length = 657
Score = 946 bits (2445), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/653 (75%), Positives = 533/653 (81%), Gaps = 62/653 (9%)
Query: 1 MAQIQV-QHQAQMSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSV 59
MAQIQV Q A + GPNGVAAG QF+ TSLYVGDLDFNVTDSQLYDLF+QVGQV+SV
Sbjct: 1 MAQIQVHQAAAPVPGPNGVAAGPGAIQFVPTSLYVGDLDFNVTDSQLYDLFNQVGQVVSV 60
Query: 60 RVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGN 119
RVCRDLSTRRSLGYGYVNY+NP DAARALDVLNFTPLNNK +RIMYSHRDPSIRKSG N
Sbjct: 61 RVCRDLSTRRSLGYGYVNYSNPQDAARALDVLNFTPLNNKPLRIMYSHRDPSIRKSGMAN 120
Query: 120 IFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLN 179
IFIKNLDK+IDHKALHDTFSSFGNILSCK+ATD SGQSKG+GFVQF+++E+AQNAIDKLN
Sbjct: 121 IFIKNLDKTIDHKALHDTFSSFGNILSCKVATDASGQSKGYGFVQFDSEEAAQNAIDKLN 180
Query: 180 GMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAV 239
GMLINDKQV+VG+FLRKQER++ KFNN++VKNL ESTTDEDLK IF E+G ITSAV
Sbjct: 181 GMLINDKQVYVGNFLRKQERDSALSNIKFNNIYVKNLAESTTDEDLKSIFEEHGAITSAV 240
Query: 240 VMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFE 299
VMRD DGKSKCFGFVNFEN DDAAKAVEALNGKKFDD+EWYVGKAQKKSERE ELKG+FE
Sbjct: 241 VMRDADGKSKCFGFVNFENVDDAAKAVEALNGKKFDDKEWYVGKAQKKSERELELKGRFE 300
Query: 300 QAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAF 359
Q++ E+V+K+Q +NLYIKNL DS++DEKLKELFS+FGTITSCKVM DPSGIS+GSGFVAF
Sbjct: 301 QSL-ESVEKYQAVNLYIKNLDDSVNDEKLKELFSDFGTITSCKVMHDPSGISRGSGFVAF 359
Query: 360 STPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPM 419
STPEEASRALAE+NGKM+VSKPLYVA AQRKEERRARLQAQFSQMRPVAM PSV PRM M
Sbjct: 360 STPEEASRALAELNGKMVVSKPLYVAPAQRKEERRARLQAQFSQMRPVAMAPSVAPRMQM 419
Query: 420 YPPGPSGLGQQFLYGQAPPAIIP-----------PQMPPRG------------------- 449
YPPG GLGQQFLYGQ PPA+IP P M P G
Sbjct: 420 YPPGAPGLGQQFLYGQGPPAMIPQAGFGYQQQLVPGMRPGGAPMPNFFVPLVQQGQQGQR 479
Query: 450 ----------------------------HAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGA 481
YRYP GRNM D P AG ML VP DMG
Sbjct: 480 PGGRRGGGPVQQTQQPVPLMQQQMLPRGRVYRYPPGRNMPDVPMPGVAGGMLSVPYDMGV 539
Query: 482 GIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEM 541
+P RDA+ GQPMPITAL+TALANA+PEQQRT+LGE LYPLV+QLE D+AAKVTGMLLEM
Sbjct: 540 -MPIRDAAGGQPMPITALATALANATPEQQRTMLGEGLYPLVDQLEHDSAAKVTGMLLEM 598
Query: 542 DQTEVLHLLESPEALKAKVAEAMEVLRSV-AQQQANNPADQLASLSLNENLVS 593
DQTEVLHLLESPEALKAKVAEAMEVLR+V AQQQ NNPAD LASLSLNENLVS
Sbjct: 599 DQTEVLHLLESPEALKAKVAEAMEVLRTVAAQQQINNPADHLASLSLNENLVS 651
>gi|356564176|ref|XP_003550332.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 654
Score = 943 bits (2438), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/657 (72%), Positives = 533/657 (81%), Gaps = 67/657 (10%)
Query: 1 MAQIQVQHQAQMSG---PNGVAAGA--SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQ 55
MA+IQVQHQ+ +S PNG A A + NQF+TTSLYVGDLD NV DSQLYDLF+QVGQ
Sbjct: 1 MAEIQVQHQSPVSAAPPPNGGVANAPNNANQFVTTSLYVGDLDQNVNDSQLYDLFNQVGQ 60
Query: 56 VLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKS 115
V+SVRVCRDL+TRRSLGYGYVN++NP DAARALDVLNFTPLNN+SIRIMYSHRDPS+RKS
Sbjct: 61 VVSVRVCRDLTTRRSLGYGYVNFSNPQDAARALDVLNFTPLNNRSIRIMYSHRDPSLRKS 120
Query: 116 GTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAI 175
GT NIFIKNLDK+IDHKALHDTFSSFG ILSCKIATD SG SKG+GFVQF+N+E+AQNAI
Sbjct: 121 GTANIFIKNLDKAIDHKALHDTFSSFGLILSCKIATDASGLSKGYGFVQFDNEEAAQNAI 180
Query: 176 DKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTI 235
DKLNGMLINDKQV+VGHFLRKQ+RE KTKFNNV+VKNL ESTTDE+L FGEYGTI
Sbjct: 181 DKLNGMLINDKQVYVGHFLRKQDRENALSKTKFNNVYVKNLSESTTDEELMINFGEYGTI 240
Query: 236 TSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELK 295
TSA++MRD DGKS+CFGFVNFEN DDAAKAVE LNGKKFDD+EWYVGKAQKKSEREQELK
Sbjct: 241 TSALIMRDADGKSRCFGFVNFENPDDAAKAVEGLNGKKFDDKEWYVGKAQKKSEREQELK 300
Query: 296 GQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSG 355
G+FEQ++KE DK+ GLNLY+KNL D+I DEKLKE+F+++GTITSCKVMRDP+GIS+GSG
Sbjct: 301 GRFEQSIKEAADKYPGLNLYLKNLDDTISDEKLKEMFADYGTITSCKVMRDPTGISRGSG 360
Query: 356 FVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPP 415
FVAFSTPEEA+RAL EMNGKM KPLYVA+AQRKEERRARLQAQFSQMRPVA+ PSV P
Sbjct: 361 FVAFSTPEEATRALGEMNGKMFAGKPLYVALAQRKEERRARLQAQFSQMRPVAITPSVAP 420
Query: 416 RMPMYPPGPSGLGQQFLYGQAPPAIIPPQ--------------------------MPPRG 449
RMP+YPPG GLGQQFLYGQ PPA++PPQ M +G
Sbjct: 421 RMPLYPPGAPGLGQQFLYGQGPPAMMPPQAGFGYQQQLVPGMRPGGGPMPSFFVPMVQQG 480
Query: 450 HAYRYPLGR---------------------------------NMQDFPFDMGAGSMLPVP 476
+ P+GR NMQD P + AG ML VP
Sbjct: 481 QQGQRPVGRRGTGPVQQPQQPMPMMQQQMLPRGRVYRYPPGRNMQDVPLQVAAGGMLSVP 540
Query: 477 VDMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTG 536
DMG G+P RDA VGQPMPI AL+TALANA PEQQRT+LGE+LYPLV+QLE D+AAKVTG
Sbjct: 541 YDMG-GLPMRDA-VGQPMPIQALATALANAPPEQQRTMLGEALYPLVDQLEHDSAAKVTG 598
Query: 537 MLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNPADQLASLSLNENLVS 593
MLLEMDQ EVLHL+ESP+ALKAKVAEAM+VLR+VAQQQ NPADQLASLSLN+NLVS
Sbjct: 599 MLLEMDQPEVLHLIESPDALKAKVAEAMDVLRNVAQQQT-NPADQLASLSLNDNLVS 654
>gi|255538240|ref|XP_002510185.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223550886|gb|EEF52372.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 658
Score = 915 bits (2365), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/660 (72%), Positives = 525/660 (79%), Gaps = 69/660 (10%)
Query: 1 MAQIQVQHQAQMSG---PNGVAAGASGNQ----FLTTSLYVGDLDFNVTDSQLYDLFSQV 53
MAQIQVQHQ+ + P A A+ ++ TSLYVGDLD NVTDSQLYD+F+QV
Sbjct: 1 MAQIQVQHQSAAAAAPIPGANGAAAAAGSGSVPYMPTSLYVGDLDLNVTDSQLYDVFNQV 60
Query: 54 GQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIR 113
GQV+SVRVCRDL+TRRSLGYGYVNY +P DAARALD+LNFTP NNK IRIMYSHRDPSIR
Sbjct: 61 GQVVSVRVCRDLTTRRSLGYGYVNYTSPQDAARALDILNFTPFNNKPIRIMYSHRDPSIR 120
Query: 114 KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQN 173
KSGTGNIFIKNLDK+IDHKALHDTFSSFGNILSCK+ATD SGQS+G+GFVQF+N+E+AQN
Sbjct: 121 KSGTGNIFIKNLDKTIDHKALHDTFSSFGNILSCKVATDSSGQSRGYGFVQFDNEEAAQN 180
Query: 174 AIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYG 233
AIDKLNGML+NDKQV+VGHFLRK ER++ + K KFNNV+VKNL ESTT+EDLK IFGEYG
Sbjct: 181 AIDKLNGMLLNDKQVYVGHFLRKHERDSASNK-KFNNVYVKNLSESTTEEDLKNIFGEYG 239
Query: 234 TITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQE 293
ITSAV+MRD DGKSKCFGFVNFEN D AAKAVE+LNGKK DD+EWYVGKAQKKSERE E
Sbjct: 240 EITSAVIMRDADGKSKCFGFVNFENTDAAAKAVESLNGKKIDDKEWYVGKAQKKSERELE 299
Query: 294 LKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKG 353
LK QFEQ+MKE VDK+QG+NLYIKNL DSI DE LKELFS+FG ITSCKVMRDPSGIS+G
Sbjct: 300 LKSQFEQSMKEAVDKYQGVNLYIKNLDDSISDENLKELFSDFGMITSCKVMRDPSGISRG 359
Query: 354 SGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSV 413
SGFVAFSTPEEASRALAEMNGKM+VSKPLYVA+AQRKEERRARLQAQFSQMRPVAM PSV
Sbjct: 360 SGFVAFSTPEEASRALAEMNGKMVVSKPLYVALAQRKEERRARLQAQFSQMRPVAMAPSV 419
Query: 414 PPRMPMYPPGPSGLGQQFLYGQAPPAIIPPQ-------------------MP-------- 446
PRMP+Y PG G+GQQFLYGQ PP +IPPQ MP
Sbjct: 420 GPRMPIYSPGAPGMGQQFLYGQGPPTMIPPQGGFGYQQQLVPGIRPGGAPMPNFFVPMVQ 479
Query: 447 ------------------------PRGHAYRYPLG--------RNMQDFPFDMGAGSMLP 474
P H P G RNM D P AG ML
Sbjct: 480 QGQQGQRHGGRRGAVPVQQNQQPVPLMHQQMLPRGRVYRYPPGRNMPDVPMPGVAGGMLS 539
Query: 475 VPVDMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKV 534
VP DMG G+P RDA+ GQP+PITAL+TALANASPE QRTLLGESLYPLV+QLE ++AAKV
Sbjct: 540 VPYDMG-GMPIRDAAAGQPVPITALATALANASPEHQRTLLGESLYPLVDQLEHESAAKV 598
Query: 535 TGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSV-AQQQANNPADQLASLSLNENLVS 593
TGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSV AQQ ANN ADQL SLSLN+ LVS
Sbjct: 599 TGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAAQQHANNTADQLTSLSLNDGLVS 658
>gi|357437769|ref|XP_003589160.1| Polyadenylate-binding protein [Medicago truncatula]
gi|355478208|gb|AES59411.1| Polyadenylate-binding protein [Medicago truncatula]
Length = 647
Score = 912 bits (2358), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/653 (71%), Positives = 522/653 (79%), Gaps = 69/653 (10%)
Query: 1 MAQIQVQHQAQMSGP---NGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVL 57
MAQIQVQHQ P NGV + NQF+TTSLYVGDL+ NV DSQLYDLF+QVGQV+
Sbjct: 1 MAQIQVQHQTPAPVPAPSNGVVPNVA-NQFVTTSLYVGDLEVNVNDSQLYDLFNQVGQVV 59
Query: 58 SVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGT 117
SVRVCRDL+TRRSLGYGYVN+ NP DAARALDVLNFTP+NNKSIR+MYSHRDPS RKSGT
Sbjct: 60 SVRVCRDLATRRSLGYGYVNFTNPQDAARALDVLNFTPMNNKSIRVMYSHRDPSSRKSGT 119
Query: 118 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDK 177
NIFIKNLDK+IDHKALHDTFSSFG I+SCKIATDGSGQSKG+GFVQFE ++SAQNAIDK
Sbjct: 120 ANIFIKNLDKTIDHKALHDTFSSFGQIMSCKIATDGSGQSKGYGFVQFEAEDSAQNAIDK 179
Query: 178 LNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITS 237
LNGMLINDKQVFVGHFLRKQ+R+ V KTKFNNV+VKNL ES T++DLK FG YGTITS
Sbjct: 180 LNGMLINDKQVFVGHFLRKQDRDNVLSKTKFNNVYVKNLSESFTEDDLKNEFGAYGTITS 239
Query: 238 AVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQ 297
AV+MRD DG+SKCFGFVNFENA+DAAKAVEALNGKK DD+EWYVGKAQKKSEREQELKG+
Sbjct: 240 AVLMRDADGRSKCFGFVNFENAEDAAKAVEALNGKKVDDKEWYVGKAQKKSEREQELKGR 299
Query: 298 FEQAMKETV-DKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGF 356
FEQ +KE+V DKFQGLNLY+KNL DSI DEKLKE+FSEFGTITS K+MRDP+G+S+GSGF
Sbjct: 300 FEQTVKESVVDKFQGLNLYLKNLDDSITDEKLKEMFSEFGTITSYKIMRDPNGVSRGSGF 359
Query: 357 VAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPR 416
VAFSTPEEASRAL EMNGKMIVSKPLYVAVAQRKE+RRARLQAQFSQMRPVA+ PSV PR
Sbjct: 360 VAFSTPEEASRALGEMNGKMIVSKPLYVAVAQRKEDRRARLQAQFSQMRPVAITPSVAPR 419
Query: 417 MPMYPPGPSGLGQQFLYGQA-----PPA--------IIPPQMP----------------- 446
MP+YPPG GLGQQF+YGQ PP ++P P
Sbjct: 420 MPLYPPGTPGLGQQFMYGQGPPAMMPPQAGFGYQQQLVPGMRPGGGPMPSYFVPMVQQGQ 479
Query: 447 ----------------------------PRGHAYRYPLGR-NMQDFPFDMGAGSMLPVPV 477
PR YRYP GR N+QD P G M+
Sbjct: 480 QGQRPGGRRGGPGQQPPQQVPMMQQQMLPRQRVYRYPPGRSNIQDAPVQNIGGGMMSY-- 537
Query: 478 DMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGM 537
DMG G+P RD V PMPI AL+TALANA PEQQRT+LGE+LYPLV+QLE D+AAKVTGM
Sbjct: 538 DMG-GLPLRD--VVPPMPIHALATALANAPPEQQRTMLGEALYPLVDQLEHDSAAKVTGM 594
Query: 538 LLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNPADQLASLSLNEN 590
LLEMDQ EVLHL+ESP+ALKAKVAEAMEVLR+V+QQQ N+PADQLASLSLN++
Sbjct: 595 LLEMDQPEVLHLIESPDALKAKVAEAMEVLRNVSQQQGNSPADQLASLSLNDS 647
>gi|356552218|ref|XP_003544466.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 652
Score = 912 bits (2356), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/655 (72%), Positives = 528/655 (80%), Gaps = 65/655 (9%)
Query: 1 MAQIQVQHQAQMSGP--NGVA-AGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVL 57
MAQIQVQHQ+ +S P NGVA A + NQF+TTSLYVGDL+ NV D+QLYDLF+QV QV+
Sbjct: 1 MAQIQVQHQSPVSAPPPNGVANAPNNPNQFVTTSLYVGDLEQNVNDAQLYDLFNQVVQVV 60
Query: 58 SVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGT 117
SVRVCRDL+TRRSLGYGYVN++NP DAARALDVLNFTPLNN+ IRIMYSHRDPS+RKSGT
Sbjct: 61 SVRVCRDLTTRRSLGYGYVNFSNPQDAARALDVLNFTPLNNRPIRIMYSHRDPSLRKSGT 120
Query: 118 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDK 177
NIFIKNLDK+IDHKALHDTFSSFG ILSCKIATD SG SKG+GFVQF+++ESAQNAIDK
Sbjct: 121 ANIFIKNLDKAIDHKALHDTFSSFGLILSCKIATDASGLSKGYGFVQFDSEESAQNAIDK 180
Query: 178 LNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITS 237
LNGMLINDKQV+VGHFLRKQ+RE KTKFNNV+VKNL ESTTDE+L K FGEYGTITS
Sbjct: 181 LNGMLINDKQVYVGHFLRKQDRENALSKTKFNNVYVKNLSESTTDEELMKFFGEYGTITS 240
Query: 238 AVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQ 297
AV+MRD DGKS+CFGFVNFEN DDAAKAVE LNGKK DD+EWYVGKAQKKSEREQELKG+
Sbjct: 241 AVIMRDADGKSRCFGFVNFENPDDAAKAVEGLNGKKVDDKEWYVGKAQKKSEREQELKGR 300
Query: 298 FEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFV 357
FEQ++KE+ DK+QG+NLY+KNL D+I DEKLKE+F+E+GTITSCKVMRDP+GI +GSGFV
Sbjct: 301 FEQSIKESADKYQGVNLYLKNLDDTISDEKLKEMFAEYGTITSCKVMRDPTGIGRGSGFV 360
Query: 358 AFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRM 417
AFSTPEEASRAL EMNGKMI KPLYVA+AQRKE+RRARLQAQFSQMRPVA+ PSV PRM
Sbjct: 361 AFSTPEEASRALGEMNGKMIAGKPLYVALAQRKEDRRARLQAQFSQMRPVAITPSVAPRM 420
Query: 418 PMYPPGPSGLG----------------------QQFLYGQAP-----PAIIPPQMP---- 446
P+YPPG GLG QQ + G P P+ P +
Sbjct: 421 PLYPPGAPGLGQQFLYGQGPPAMMPPQAGFGYQQQLVPGMRPGGGPMPSFFVPMVQQGQQ 480
Query: 447 ----------------------------PRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVD 478
PRG YRYP GRNMQD P AG M+ VP D
Sbjct: 481 GQRPGGRRGTGPVQQPQQPMPMMQQQMLPRGRVYRYPPGRNMQDVPLQGVAGGMMSVPYD 540
Query: 479 MGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGML 538
MG G+P RDA VGQPMPI AL+TALANA PEQQRT+LGE+LYPLV+QLE DAAAKVTGML
Sbjct: 541 MG-GLPIRDA-VGQPMPIQALATALANAPPEQQRTMLGEALYPLVDQLEHDAAAKVTGML 598
Query: 539 LEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNPADQLASLSLNENLVS 593
LEMDQ EVLHL+ESP+ALKAKVAEAM+VLR+VAQQQ NPADQLASLSLN+NLVS
Sbjct: 599 LEMDQPEVLHLIESPDALKAKVAEAMDVLRNVAQQQT-NPADQLASLSLNDNLVS 652
>gi|317106694|dbj|BAJ53195.1| JHL03K20.4 [Jatropha curcas]
Length = 642
Score = 909 bits (2348), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/646 (69%), Positives = 522/646 (80%), Gaps = 57/646 (8%)
Query: 1 MAQIQVQHQAQMSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVR 60
MAQ+QVQ QA +S PNGV + NQF+ TSLYVGDL+ NVT++QLYDLF+Q GQV+S+R
Sbjct: 1 MAQVQVQPQAPVSAPNGVVSNGV-NQFVPTSLYVGDLEQNVTETQLYDLFNQHGQVVSIR 59
Query: 61 VCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNI 120
VCRDL++RRSLGYGYVNY N DAA+A++VLNFTP+N K IRIMYS+RDP+IRKSGTGNI
Sbjct: 60 VCRDLTSRRSLGYGYVNYNNVHDAAQAIEVLNFTPVNGKPIRIMYSYRDPTIRKSGTGNI 119
Query: 121 FIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNG 180
+IKNLDK+ID+KALHDTFS+FG+ILSCK+ATD GQS G+GFVQF+N+ESA+NAIDKLNG
Sbjct: 120 YIKNLDKAIDNKALHDTFSAFGSILSCKVATDSLGQSLGYGFVQFDNEESAKNAIDKLNG 179
Query: 181 MLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVV 240
ML+NDKQV+VG FLRKQERE+ K FNNV+VKNL E+TT+EDLKKIFGEYGTITSAVV
Sbjct: 180 MLLNDKQVYVGPFLRKQERESAIDKATFNNVYVKNLSETTTEEDLKKIFGEYGTITSAVV 239
Query: 241 MRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQ 300
MRDG+GKS+CFGFVNFEN DDAA++VEALNGK FD++EWYVGKAQKKSERE ELKG+FEQ
Sbjct: 240 MRDGNGKSRCFGFVNFENPDDAAQSVEALNGKTFDEKEWYVGKAQKKSEREVELKGRFEQ 299
Query: 301 AMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFS 360
+KETVDKFQGLNLY+KNL DSI D+KLKELFSEFGTITSCKVMRDP+G+S+GSGFVAFS
Sbjct: 300 TLKETVDKFQGLNLYVKNLDDSITDDKLKELFSEFGTITSCKVMRDPNGVSRGSGFVAFS 359
Query: 361 TPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMY 420
T EEASRAL EMNGKM+VSKPLYVA+AQRKEERRARLQAQ+SQ+RP AM P + PRMP+Y
Sbjct: 360 TAEEASRALTEMNGKMVVSKPLYVALAQRKEERRARLQAQYSQIRP-AMAPPIGPRMPIY 418
Query: 421 PPGPSGLGQQFLYGQAPPAIIP-------------------------------------- 442
PPG G+G Q YGQ PPAI+P
Sbjct: 419 PPGTPGIGHQLFYGQGPPAIVPPQPGFGYQQQLVPGMRPNFFVPMVQPGQQAQRPSGRRS 478
Query: 443 ---------------PQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRD 487
PQM PRG YRYP GR+M D P G MLPVP DMG G+P RD
Sbjct: 479 GAGAVQPQQPLPMMQPQMLPRGRVYRYPPGRSMPDVPMAGLPGGMLPVPYDMG-GMPFRD 537
Query: 488 ASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVL 547
+ QP+ AL+TALANA PEQQRTLLGE+LYPLV+QLE + AAKVTGMLLEMDQTEVL
Sbjct: 538 GAFSQPVQTGALATALANAMPEQQRTLLGENLYPLVDQLEHENAAKVTGMLLEMDQTEVL 597
Query: 548 HLLESPEALKAKVAEAMEVLRSVAQQQANNPADQLASLSLNENLVS 593
HLLESPE+LKAKVAEAMEVLR+V QQQ N+P D++A+LSLN++LVS
Sbjct: 598 HLLESPESLKAKVAEAMEVLRTV-QQQVNSPTDRMATLSLNDSLVS 642
>gi|356499763|ref|XP_003518706.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 646
Score = 903 bits (2333), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/649 (71%), Positives = 520/649 (80%), Gaps = 61/649 (9%)
Query: 1 MAQIQVQHQAQMSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVR 60
MAQ+QV Q + GA+GNQF+TTSLYVGDLD NVTD+QLYDLF+Q+GQV+SVR
Sbjct: 1 MAQVQVPPQNAIP--GPNGGGAAGNQFVTTSLYVGDLDPNVTDAQLYDLFNQLGQVVSVR 58
Query: 61 VCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNI 120
VCRDL++RRSLGYGYVN++NP DAARALDVLNFTPLNN+ IRIMYSHRDPSIRKSG GNI
Sbjct: 59 VCRDLTSRRSLGYGYVNFSNPQDAARALDVLNFTPLNNRPIRIMYSHRDPSIRKSGQGNI 118
Query: 121 FIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNG 180
FIKNLD++IDHKALHDTFS+FGNILSCK+ATD SGQSKG+GFVQF+N+ESAQ AI+KLNG
Sbjct: 119 FIKNLDRAIDHKALHDTFSTFGNILSCKVATDSSGQSKGYGFVQFDNEESAQKAIEKLNG 178
Query: 181 MLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVV 240
ML+NDKQV+VG FLRKQERE+ A K KFNNVFVKNL ESTTD++LK +FGE+GTITSAVV
Sbjct: 179 MLLNDKQVYVGPFLRKQERESTADKAKFNNVFVKNLSESTTDDELKNVFGEFGTITSAVV 238
Query: 241 MRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQ 300
MRDGDGKSKCFGFVNFENADDAA+AVEALNGKKFDD+EWYVGKAQKKSERE ELK +FEQ
Sbjct: 239 MRDGDGKSKCFGFVNFENADDAARAVEALNGKKFDDKEWYVGKAQKKSERENELKQRFEQ 298
Query: 301 AMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFS 360
+MKE DK+QG NLY+KNL DS+ D+KLKELFS FGTITSCKVMRDP+GIS+GSGFVAFS
Sbjct: 299 SMKEAADKYQGANLYVKNLDDSLGDDKLKELFSPFGTITSCKVMRDPNGISRGSGFVAFS 358
Query: 361 TPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMY 420
TP+EASRAL EMNGKM+VSKPLYV +AQRKE+RRARLQAQF+QMRPV M PSV PR+PMY
Sbjct: 359 TPDEASRALLEMNGKMVVSKPLYVTLAQRKEDRRARLQAQFAQMRPVGMPPSVGPRVPMY 418
Query: 421 PPG------------------PS----GLGQQFLYG------------------------ 434
PPG PS G QQ + G
Sbjct: 419 PPGGPGIGQQIFYAQGPPAIIPSQPGFGYQQQLVPGMRPGAAPVPNFFVPMVQQGQQGQR 478
Query: 435 ------------QAPPAIIPPQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAG 482
Q P ++P QM PRG YRYP GR M D AG M VP D+G G
Sbjct: 479 PGGRRTGAVQQSQQPVPMMPQQMLPRGRVYRYPPGRGMPDVSMPGVAGGMFSVPYDVG-G 537
Query: 483 IPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMD 542
+P RDAS+ Q +P+ AL+TALANASPEQQRT+LGE+LYPLVEQLE D AAKVTGMLLEMD
Sbjct: 538 MPLRDASISQQIPVGALATALANASPEQQRTMLGENLYPLVEQLEPDNAAKVTGMLLEMD 597
Query: 543 QTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNPADQLASLSLNENL 591
QTEVLHLLESPEALKAKVAEAM+VLR+VAQQQA ADQLASLSLN+NL
Sbjct: 598 QTEVLHLLESPEALKAKVAEAMDVLRNVAQQQAGGTADQLASLSLNDNL 646
>gi|224137600|ref|XP_002327166.1| predicted protein [Populus trichocarpa]
gi|222835481|gb|EEE73916.1| predicted protein [Populus trichocarpa]
Length = 632
Score = 900 bits (2326), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/638 (73%), Positives = 515/638 (80%), Gaps = 69/638 (10%)
Query: 19 AAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNY 78
AAG QF+ TSLYVGDLDFNVTDSQLYD+F+QVGQV+SVRVCRDLSTRRSLGYGYVNY
Sbjct: 1 AAGPGAIQFVPTSLYVGDLDFNVTDSQLYDVFNQVGQVVSVRVCRDLSTRRSLGYGYVNY 60
Query: 79 ANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTF 138
+NP DAARALDVLNFTPLNNK IRIMYSHRDPSIRKSG NIFIKNLDK IDHKALHDTF
Sbjct: 61 SNPQDAARALDVLNFTPLNNKPIRIMYSHRDPSIRKSGMANIFIKNLDKGIDHKALHDTF 120
Query: 139 SSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQE 198
SSFGNILSCK+ATD SGQSKG+GFVQF+++E+AQNAIDKLNGML+NDKQV+VGHFLRKQ+
Sbjct: 121 SSFGNILSCKVATDASGQSKGYGFVQFDSEEAAQNAIDKLNGMLVNDKQVYVGHFLRKQD 180
Query: 199 RETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFEN 258
R+ KFNNVFVKNL ESTTDE+LK IF E+G ITSAVVMRD DGKSKCFGFVNFE+
Sbjct: 181 RDGALYSIKFNNVFVKNLAESTTDEELKNIFAEHGAITSAVVMRDADGKSKCFGFVNFES 240
Query: 259 ADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKN 318
ADDAAKAVEALNGKK D EWYVGKAQKKSERE ELKG+FEQ+MKETVDKFQGLNLYIKN
Sbjct: 241 ADDAAKAVEALNGKKIDGEEWYVGKAQKKSERELELKGRFEQSMKETVDKFQGLNLYIKN 300
Query: 319 LGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIV 378
L DSI+DEKLKELFS+FG ITSCKVMRDPSGIS+GSGFVAFSTPEEASRALAEMNGKM++
Sbjct: 301 LDDSINDEKLKELFSDFGAITSCKVMRDPSGISRGSGFVAFSTPEEASRALAEMNGKMLI 360
Query: 379 SKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPP 438
SKPLYVA+AQRKEERRARLQAQFSQMRPV M PSV RMPMYPPG G+GQQFLYGQ PP
Sbjct: 361 SKPLYVALAQRKEERRARLQAQFSQMRPVTMAPSVASRMPMYPPGAPGMGQQFLYGQGPP 420
Query: 439 AIIPPQMPPRGHAYR-------YPLGRNMQDF---------------------------- 463
A++PPQ G Y+ P G M +F
Sbjct: 421 AMMPPQA---GFGYQQQLVPGMRPGGAPMPNFFVPLVQQGQQGQRPGGRRGGGPVQQTQQ 477
Query: 464 PFDMGAGSMLP---------------VPV------------DMGAGIPRRDASVGQPMPI 496
P + MLP VP+ DMG G+P RDA+ QPMPI
Sbjct: 478 PVPLMQQQMLPRGRVYRYPPGRNMPDVPMPGVAGGMLSVPYDMG-GMPIRDAA--QPMPI 534
Query: 497 TALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEAL 556
TAL+TALANA+PEQQRT+LGESLYP+V+QLE D+AAKVTGMLLEMDQTEVLHLLESPEAL
Sbjct: 535 TALATALANATPEQQRTMLGESLYPIVDQLEHDSAAKVTGMLLEMDQTEVLHLLESPEAL 594
Query: 557 KAKVAEAMEVLRSV-AQQQANNPADQLASLSLNENLVS 593
KAKVAEAMEVLR+V AQQQ NN ADQL SLSLN+NLVS
Sbjct: 595 KAKVAEAMEVLRTVAAQQQINNQADQLGSLSLNDNLVS 632
>gi|317106693|dbj|BAJ53194.1| JHL03K20.3 [Jatropha curcas]
Length = 642
Score = 900 bits (2326), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/646 (70%), Positives = 527/646 (81%), Gaps = 57/646 (8%)
Query: 1 MAQIQVQHQAQMSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVR 60
M+Q+Q Q Q +S P G+A+ GNQF++TSLYVGDL+ NVT++QLYDLF+Q+GQ++S+R
Sbjct: 1 MSQVQSQPQGPVSAPVGMASNG-GNQFVSTSLYVGDLEQNVTETQLYDLFNQLGQIVSIR 59
Query: 61 VCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNI 120
VCRDL++RRSLGYGYVNY N DAA+AL+VLNFTP+N K IRIMYS+RDP+IRKSG GNI
Sbjct: 60 VCRDLTSRRSLGYGYVNYNNVHDAAQALEVLNFTPVNGKPIRIMYSYRDPTIRKSGAGNI 119
Query: 121 FIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNG 180
+IKNLDK+ID+KALHDTFS+FGNILSCK+ATD +GQS G+GFVQF+N+ESA+NAIDKLNG
Sbjct: 120 YIKNLDKAIDNKALHDTFSAFGNILSCKVATDSAGQSLGYGFVQFDNEESAKNAIDKLNG 179
Query: 181 MLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVV 240
ML+NDKQV+VG FLR+QERE+ KTKFNNV+VKNL E+TT+EDLKKIFGEYG ITSAVV
Sbjct: 180 MLLNDKQVYVGPFLRRQERESGTDKTKFNNVYVKNLSETTTEEDLKKIFGEYGAITSAVV 239
Query: 241 MRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQ 300
MRDGDGKS+CFGFVNFEN DDAA++VEALNGK FD++EWYVGKAQKKSERE ELKGQFEQ
Sbjct: 240 MRDGDGKSRCFGFVNFENPDDAARSVEALNGKTFDEKEWYVGKAQKKSEREVELKGQFEQ 299
Query: 301 AMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFS 360
+KETVDKF+GLNLY+KNL DSI D+KLKELFSEFGTITSCKVMRDP+G+SKGSGFVA+S
Sbjct: 300 TLKETVDKFEGLNLYVKNLDDSITDDKLKELFSEFGTITSCKVMRDPNGVSKGSGFVAYS 359
Query: 361 TPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMY 420
T EEAS+AL EMNGKMIVSKPLYVA+AQRKEERRARLQAQFSQMRP AM P+V PRMPMY
Sbjct: 360 TAEEASKALTEMNGKMIVSKPLYVALAQRKEERRARLQAQFSQMRP-AMAPAVGPRMPMY 418
Query: 421 PPGPSGLGQQFLYGQAPPAIIP-------------------------------------- 442
P G G+GQQ YGQ PPAI+P
Sbjct: 419 PHGTPGIGQQLFYGQGPPAIVPPQPGFGYQQQLVPGMRPNFFVPMVQPGQQAQRPSGRRS 478
Query: 443 ---------------PQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRD 487
PQM PRG YRYP GR+M D P G MLPVP DMG G+P RD
Sbjct: 479 GAGPVQPQQPLPMMQPQMLPRGRVYRYPPGRSMPDVPMAGLPGGMLPVPYDMG-GMPFRD 537
Query: 488 ASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVL 547
+ QPM AL+TALANA+PEQQRTLLGE+LYPLV+QLE + AAKVTGMLLEMDQTEVL
Sbjct: 538 GAFSQPMQTGALATALANATPEQQRTLLGENLYPLVDQLEHENAAKVTGMLLEMDQTEVL 597
Query: 548 HLLESPEALKAKVAEAMEVLRSVAQQQANNPADQLASLSLNENLVS 593
HLLESPE+L+AKVAEAMEVLR+V QQQAN+P +++A+LSLNENLVS
Sbjct: 598 HLLESPESLEAKVAEAMEVLRTV-QQQANSPTNRMATLSLNENLVS 642
>gi|225438781|ref|XP_002283105.1| PREDICTED: polyadenylate-binding protein 2 [Vitis vinifera]
gi|296082381|emb|CBI21386.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 898 bits (2320), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/628 (72%), Positives = 502/628 (79%), Gaps = 61/628 (9%)
Query: 26 QFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAA 85
QF++TSLYVGDL+ NVTDS LYDLF Q+G V+SVRVCRDLSTRRSLGYGYVNY N DAA
Sbjct: 28 QFVSTSLYVGDLESNVTDSHLYDLFGQLGPVVSVRVCRDLSTRRSLGYGYVNYGNTQDAA 87
Query: 86 RALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNIL 145
RALD+LNFTPLN K IRIMYS RDPSIR+SGT NIFIKNLDK+ID+KAL+DTFS+FG IL
Sbjct: 88 RALDMLNFTPLNGKPIRIMYSFRDPSIRRSGTANIFIKNLDKAIDNKALYDTFSTFGAIL 147
Query: 146 SCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIK 205
SCKIATD SGQSKG+GFVQF+N+ESA+NA DKLNGML+NDKQV+VG F+RKQERE+ K
Sbjct: 148 SCKIATDASGQSKGYGFVQFDNEESAKNATDKLNGMLLNDKQVYVGPFVRKQERESATNK 207
Query: 206 TKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKA 265
TKFNNV+VKNL ESTTDEDLK IFGEYG ITSAVVM+DGDGKSKCFGFVNFENADDAA++
Sbjct: 208 TKFNNVYVKNLLESTTDEDLKNIFGEYGPITSAVVMQDGDGKSKCFGFVNFENADDAARS 267
Query: 266 VEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDD 325
VEALNGKKFDD+EWYVGKAQKK+ERE ELKG+FEQ++KE VDKFQGLNLY+KNL DSI D
Sbjct: 268 VEALNGKKFDDKEWYVGKAQKKTEREVELKGRFEQSLKEAVDKFQGLNLYVKNLDDSIAD 327
Query: 326 EKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVA 385
+KL+ELFSEFGTITSCKVMRDP+GIS+GSGFVAFST EEASRALA+MNGKM+ SKPLYVA
Sbjct: 328 DKLRELFSEFGTITSCKVMRDPNGISRGSGFVAFSTAEEASRALADMNGKMVASKPLYVA 387
Query: 386 VAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLY------------ 433
+AQRKE+RRARLQAQFSQMRP AM PSV PRM MYPPG GLGQQ Y
Sbjct: 388 LAQRKEDRRARLQAQFSQMRPAAMAPSVGPRMSMYPPGAPGLGQQLFYGQGPPALIPPQP 447
Query: 434 --------------GQAP-PAIIPPQMPP------------------------------- 447
G AP P P + P
Sbjct: 448 GFGYQHQLVPGMRPGAAPMPNFFVPMVQPGQPNQRPGGRRSGTGPVQQTQQPLPLMQQQM 507
Query: 448 --RGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALSTALAN 505
RG YRYP GRNM D P G ML P DM AG+P RDA+V QPMPI AL+TALAN
Sbjct: 508 LPRGRVYRYPPGRNMADVPIPGVPGGMLSAPYDM-AGMPFRDAAVSQPMPIGALATALAN 566
Query: 506 ASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAME 565
A P+QQRTLLGE+LYPLV+QLE + AAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAME
Sbjct: 567 APPDQQRTLLGENLYPLVDQLEHEMAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAME 626
Query: 566 VLRSVAQQQANNPADQLASLSLNENLVS 593
VLR+VAQQQANNP D++ASLSLN+ L S
Sbjct: 627 VLRNVAQQQANNPTDRMASLSLNDTLTS 654
>gi|356521524|ref|XP_003529405.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 651
Score = 895 bits (2312), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/655 (70%), Positives = 519/655 (79%), Gaps = 66/655 (10%)
Query: 1 MAQIQVQHQAQMSGPNGVAAGASGN-QFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSV 59
MAQ+QV Q M GPNG QF+TTSLYVGDLD NVTD+QLYDLF+Q+GQV+SV
Sbjct: 1 MAQVQVPPQNAMPGPNGGGGAGGAGNQFVTTSLYVGDLDPNVTDAQLYDLFNQLGQVVSV 60
Query: 60 RVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGN 119
RVCRDL++RRSLGYGYVN++NP DAARALDVLNFTPLNN+ IRIMYSHRDPSIRKSG GN
Sbjct: 61 RVCRDLTSRRSLGYGYVNFSNPQDAARALDVLNFTPLNNRPIRIMYSHRDPSIRKSGQGN 120
Query: 120 IFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLN 179
IFIKNLD++IDHKALHDTFS+FGNILSCK+ATD SGQSKG+GFVQF+N+ESAQ AI+KLN
Sbjct: 121 IFIKNLDRAIDHKALHDTFSTFGNILSCKVATDSSGQSKGYGFVQFDNEESAQKAIEKLN 180
Query: 180 GMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAV 239
GML+NDKQV+VG FLRKQERE+ A K KFNNVFVKNL ESTTD++LK FGE+GTITSAV
Sbjct: 181 GMLLNDKQVYVGPFLRKQERESAADKAKFNNVFVKNLSESTTDDELKNTFGEFGTITSAV 240
Query: 240 VMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFE 299
VMRDGDGKSKCFGFVNFENADDAA+AVEALNGK FDD+EWYVGKAQKKSERE ELK +FE
Sbjct: 241 VMRDGDGKSKCFGFVNFENADDAARAVEALNGKNFDDKEWYVGKAQKKSERENELKQRFE 300
Query: 300 QAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAF 359
Q+MKE DK+QG NLY+KNL DSI DEKLKELFS FGTITSCKVMRDP+G+S+GSGFVAF
Sbjct: 301 QSMKEAADKYQGANLYVKNLDDSIGDEKLKELFSPFGTITSCKVMRDPNGLSRGSGFVAF 360
Query: 360 STPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPM 419
STPEEASRAL EMNGKM+VSKPLYV +AQRKE+RRARLQAQF+QMRPV M PSV PR+PM
Sbjct: 361 STPEEASRALLEMNGKMVVSKPLYVTLAQRKEDRRARLQAQFAQMRPVGMPPSVGPRVPM 420
Query: 420 YPPGPSGLGQQFLYGQAPPAIIPPQMPPRGHAYRYPLGRNMQ-------DF--------- 463
YPPG G+GQQ Y Q PPAIIP Q G Y+ L M+ +F
Sbjct: 421 YPPGGPGIGQQLFYSQGPPAIIPSQ---PGFGYQQQLMPGMRPGAAPVPNFFVPMVQQGQ 477
Query: 464 ------------------PFDMGAGSMLP---------------VPV------------D 478
P M MLP VP+ D
Sbjct: 478 QGQRPGGRRPGAVQQSQQPVPMMPQQMLPRGRVYRYPPGRGIPDVPIPGVAGGMFSVPYD 537
Query: 479 MGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGML 538
+G G+P RDAS+ Q +P+ AL+TALANASPEQQRT+LGE+LYPLVEQLE D AAKVTGML
Sbjct: 538 VG-GMPLRDASISQQIPVGALATALANASPEQQRTMLGENLYPLVEQLEPDNAAKVTGML 596
Query: 539 LEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNPADQLASLSLNENLVS 593
LEMDQTEVLHLLESPEALKAKVAEAM+VLR+VAQQQA ADQLASLSLN+NLVS
Sbjct: 597 LEMDQTEVLHLLESPEALKAKVAEAMDVLRNVAQQQAGGTADQLASLSLNDNLVS 651
>gi|357475273|ref|XP_003607922.1| Poly(A)-binding protein [Medicago truncatula]
gi|355508977|gb|AES90119.1| Poly(A)-binding protein [Medicago truncatula]
Length = 654
Score = 894 bits (2310), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/643 (71%), Positives = 510/643 (79%), Gaps = 63/643 (9%)
Query: 1 MAQIQVQHQAQMSGPNGVAAGASGN----QFLTTSLYVGDLDFNVTDSQLYDLFSQVGQV 56
MAQ+QVQ Q M+GPNG AA A+ F+TTSLYVGDLD NVTDSQLYDLF+Q+GQV
Sbjct: 1 MAQVQVQPQNAMTGPNGGAAAAAAAGGGGNFVTTSLYVGDLDMNVTDSQLYDLFNQLGQV 60
Query: 57 LSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSG 116
+SVRVCRDL+TRRSLGYGYVNY+NP DAARALDVLNFTPLNN+ IRIMYSHRDPSIRKSG
Sbjct: 61 VSVRVCRDLTTRRSLGYGYVNYSNPQDAARALDVLNFTPLNNRPIRIMYSHRDPSIRKSG 120
Query: 117 TGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAID 176
GNIFIKNLDK+IDHKALHDTFSSFGNILSCK+A DGSGQSKG+GFVQF+ +E+AQ AI+
Sbjct: 121 QGNIFIKNLDKAIDHKALHDTFSSFGNILSCKVAVDGSGQSKGYGFVQFDTEEAAQKAIE 180
Query: 177 KLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTIT 236
KLNGML+NDKQV+VG FLRKQERE+ + KFNNVFVKNL ESTTD++LKK FGE+GTIT
Sbjct: 181 KLNGMLLNDKQVYVGPFLRKQERESTGDRAKFNNVFVKNLSESTTDDELKKTFGEFGTIT 240
Query: 237 SAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKG 296
SAVVMRDGDGKSKCFGFVNFE+ DDAA+AVEALNGKK DD+EWYVGKAQKKSERE ELK
Sbjct: 241 SAVVMRDGDGKSKCFGFVNFESTDDAARAVEALNGKKIDDKEWYVGKAQKKSEREHELKI 300
Query: 297 QFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGF 356
+FEQ+MKE DK+QG NLY+KNL DSI DEKLKELFS +GTITSCKVMRDP+G+S+GSGF
Sbjct: 301 KFEQSMKEAADKYQGANLYVKNLDDSIADEKLKELFSSYGTITSCKVMRDPNGVSRGSGF 360
Query: 357 VAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPR 416
VAFSTPEEASRAL EMNGKM+ SKPLYV +AQRKE+RRARLQAQF+QMRPV+M PSV PR
Sbjct: 361 VAFSTPEEASRALLEMNGKMVASKPLYVTLAQRKEDRRARLQAQFAQMRPVSMPPSVAPR 420
Query: 417 MPMYPPG------------------PS----GLGQQFLYG-------------------- 434
MPMYPPG PS G QQ + G
Sbjct: 421 MPMYPPGGPGMGQQIFYGQGPPAIIPSQPGFGYQQQLVPGMRPGGAPVPNFFVPMVQQGQ 480
Query: 435 ----------------QAPPAIIPPQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVD 478
Q P ++P QM PRG YRYP GR M D P AG M VP D
Sbjct: 481 QGQRPGGRRGGGVQQSQQPVPLMPQQMLPRGRVYRYPPGRGMPDGPMPGVAGGMYSVPYD 540
Query: 479 MGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGML 538
+G G+P RDAS+ Q +PI AL++ LANASPEQQRT+LGE+LYPLVEQLE D AAKVTGML
Sbjct: 541 VG-GMPIRDASLSQQIPIGALASHLANASPEQQRTMLGENLYPLVEQLEPDNAAKVTGML 599
Query: 539 LEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNPADQ 581
LEMDQTEVLHLLESPEALKAKVAEAM+VLR+VAQQQA ADQ
Sbjct: 600 LEMDQTEVLHLLESPEALKAKVAEAMDVLRNVAQQQAGGAADQ 642
>gi|386780450|dbj|BAM15222.1| poly(A)-binding protein [Nicotiana tabacum]
Length = 657
Score = 894 bits (2310), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/660 (70%), Positives = 523/660 (79%), Gaps = 70/660 (10%)
Query: 1 MAQIQVQHQA--------QMSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQ 52
MAQIQVQHQ+ + G AA A+ +TSLYVGDL+FNVTDSQLYDLF+Q
Sbjct: 1 MAQIQVQHQSPVAGGNGVVAAAVGGAAAVATPGGLTSTSLYVGDLEFNVTDSQLYDLFNQ 60
Query: 53 VGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSI 112
VGQV+SVRVCRDLSTRRSLGYGYVNY+NP DA+RA+++LNFTP+N KSIR+MYSHRDP++
Sbjct: 61 VGQVVSVRVCRDLSTRRSLGYGYVNYSNPNDASRAMEMLNFTPVNGKSIRVMYSHRDPTL 120
Query: 113 RKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQ 172
RKSG+ NIFIKNLDKSID+KALHDTFSSFGNILSCKIATD +GQSKG+GFVQ++N+ESAQ
Sbjct: 121 RKSGSANIFIKNLDKSIDNKALHDTFSSFGNILSCKIATDSNGQSKGYGFVQYDNEESAQ 180
Query: 173 NAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEY 232
AIDKLNGML+NDKQV+VGHFLRKQERE+ TKF NV+VKNL ESTTD++LKK+FGE+
Sbjct: 181 GAIDKLNGMLMNDKQVYVGHFLRKQERESTTGMTKFQNVYVKNLSESTTDDELKKVFGEF 240
Query: 233 GTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQ 292
G ITSAVVMRD DGKSKCFGF+NFE A+DAAKAVE+LNGKKFDD+EWYVGKAQKKSEREQ
Sbjct: 241 GNITSAVVMRDADGKSKCFGFINFETAEDAAKAVESLNGKKFDDKEWYVGKAQKKSEREQ 300
Query: 293 ELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISK 352
ELK +FEQ KE VDK+QGLNLY+KNL D+IDDEKLKELFSEFGTITSCKVMRDPSGIS+
Sbjct: 301 ELKSKFEQTAKEAVDKYQGLNLYVKNLDDTIDDEKLKELFSEFGTITSCKVMRDPSGISR 360
Query: 353 GSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPS 412
GSGFVAFST EEASRAL+EMNGKMIVSKPLYVA+AQRKEERRA+LQAQFSQ+RPVAM PS
Sbjct: 361 GSGFVAFSTSEEASRALSEMNGKMIVSKPLYVALAQRKEERRAKLQAQFSQLRPVAMPPS 420
Query: 413 VPPRMPMYPP-------------GP-------SGLG--QQFLYGQAPPAIIPPQ--MP-- 446
+ PRMP+YPP GP +G G QQ + G P P MP
Sbjct: 421 LAPRMPIYPPGAPGIGQQLFYGQGPPAMIPPQAGFGYQQQLVPGMRPGGAPMPNFFMPLV 480
Query: 447 ---------------------------------PRGHAYRYPLGRNMQDFPFDMGAGSML 473
PRG YRYP GRN + P G ML
Sbjct: 481 QQGQQGQRPGGRRGAGPVQQTQQPMPLMQQQMLPRGRMYRYPPGRNGPEGPMPGVPGGML 540
Query: 474 PVPVDMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAK 533
VP DMG +PR D+++GQPMPI+ L++ALANA PEQQRT+LGESLYPLV+QLE + AAK
Sbjct: 541 SVPYDMGGMLPR-DSAMGQPMPISTLASALANAPPEQQRTMLGESLYPLVDQLEHEHAAK 599
Query: 534 VTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNPADQLASLSLNENLVS 593
VTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLR+V QQ NPADQLASLSLN+NLVS
Sbjct: 600 VTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRNV--QQTTNPADQLASLSLNDNLVS 657
>gi|302142286|emb|CBI19489.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 891 bits (2302), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/635 (74%), Positives = 518/635 (81%), Gaps = 58/635 (9%)
Query: 1 MAQIQVQHQAQMSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVR 60
MAQIQ A ++GPNGVA T SLYVGDLD N+TDSQLYDLF Q GQVLSVR
Sbjct: 1 MAQIQ----AAVAGPNGVAN--------TASLYVGDLDVNITDSQLYDLFIQAGQVLSVR 48
Query: 61 VCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNI 120
VCRDLSTRRSLGYGYVNY+NP DAARALD+LNFTPLN K IRIMYSHRDPSIRKSGT NI
Sbjct: 49 VCRDLSTRRSLGYGYVNYSNPQDAARALDLLNFTPLNGKPIRIMYSHRDPSIRKSGTANI 108
Query: 121 FIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNG 180
FIKNLDKSID+KALHDTFS+FGNILSCKIATD SGQSKG+GFVQF+N+ESAQNAIDKLNG
Sbjct: 109 FIKNLDKSIDNKALHDTFSAFGNILSCKIATDPSGQSKGYGFVQFDNEESAQNAIDKLNG 168
Query: 181 MLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVV 240
MLINDKQV+VG FLRKQERET KTKFNNV+VKNL ESTT+EDLK IFGE+G ITS VV
Sbjct: 169 MLINDKQVYVGQFLRKQERETALNKTKFNNVYVKNLSESTTEEDLKNIFGEFGIITSVVV 228
Query: 241 MRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQ 300
MRDGDGKSKCFGFVNFENADDAA+AVEALNGKKFD++EWYVGKAQKK ERE ELKG+FEQ
Sbjct: 229 MRDGDGKSKCFGFVNFENADDAAEAVEALNGKKFDEKEWYVGKAQKKYERELELKGRFEQ 288
Query: 301 AMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFS 360
+MKE VDKFQG+NLYIKNL DSI D+KLKELFSEFGTITSCKVMRDPSGIS+GSGFVAFS
Sbjct: 289 SMKEVVDKFQGVNLYIKNLDDSIGDDKLKELFSEFGTITSCKVMRDPSGISRGSGFVAFS 348
Query: 361 TPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMY 420
T EEASRAL EMNGKM+VSKPLYVA+AQRKEERRARLQAQFSQMRPV+M PSV PRMPMY
Sbjct: 349 TSEEASRALTEMNGKMVVSKPLYVALAQRKEERRARLQAQFSQMRPVSMAPSVAPRMPMY 408
Query: 421 PPGPSGLGQQFLYGQAPPAIIPPQMPPRGHAYR-------YPLGRNMQDF---------- 463
PPG GLGQQ YGQ PPAIIPPQ G Y+ P G M +F
Sbjct: 409 PPGAPGLGQQLFYGQGPPAIIPPQA---GFGYQQQLVPGMRPGGAPMPNFFVPLVQQGQQ 465
Query: 464 ------------------PFDMGAGSMLP--------VPVDMGAGIPRRDASVGQPMPIT 497
P + MLP P +P DA++GQPMPI+
Sbjct: 466 GQRPGGRRGAGPVQQNQQPVPLMQQQMLPRGGRVYRYPPGRNMPDVPMPDAAIGQPMPIS 525
Query: 498 ALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALK 557
AL++ALANA+P+QQRT+LGESLYPLV+QLE + AAKVTGMLLEMDQTEVLHLLESPEALK
Sbjct: 526 ALASALANATPDQQRTMLGESLYPLVDQLEHEMAAKVTGMLLEMDQTEVLHLLESPEALK 585
Query: 558 AKVAEAMEVLRSVAQQQANNPADQLASLSLNENLV 592
+KVAEAM+VLR+VAQQQAN+P +QLASLSLN++LV
Sbjct: 586 SKVAEAMDVLRNVAQQQANSPTEQLASLSLNDSLV 620
>gi|225458678|ref|XP_002284923.1| PREDICTED: polyadenylate-binding protein 2 [Vitis vinifera]
gi|147773643|emb|CAN76464.1| hypothetical protein VITISV_017035 [Vitis vinifera]
Length = 640
Score = 890 bits (2299), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 476/654 (72%), Positives = 523/654 (79%), Gaps = 77/654 (11%)
Query: 1 MAQIQVQHQAQMSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVR 60
MAQIQ A ++GPNGVA T SLYVGDLD N+TDSQLYDLF Q GQVLSVR
Sbjct: 1 MAQIQ----AAVAGPNGVAN--------TASLYVGDLDVNITDSQLYDLFIQAGQVLSVR 48
Query: 61 VCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNI 120
VCRDLSTRRSLGYGYVNY+NP DAARALD+LNFTPLN K IRIMYSHRDPSIRKSGT NI
Sbjct: 49 VCRDLSTRRSLGYGYVNYSNPQDAARALDLLNFTPLNGKPIRIMYSHRDPSIRKSGTANI 108
Query: 121 FIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNG 180
FIKNLDKSID+KALHDTFS+FGNILSCKIATD SGQSKG+GFVQF+N+ESAQNAIDKLNG
Sbjct: 109 FIKNLDKSIDNKALHDTFSAFGNILSCKIATDPSGQSKGYGFVQFDNEESAQNAIDKLNG 168
Query: 181 MLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVV 240
MLINDKQV+VG FLRKQERET KTKFNNV+VKNL ESTT+EDLK IFGE+G ITS VV
Sbjct: 169 MLINDKQVYVGQFLRKQERETALNKTKFNNVYVKNLSESTTEEDLKNIFGEFGIITSVVV 228
Query: 241 MRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQ 300
MRDGDGKSKCFGFVNFENADDAA+AVEALNGKKFD++EWYVGKAQKK ERE ELKG+FEQ
Sbjct: 229 MRDGDGKSKCFGFVNFENADDAAEAVEALNGKKFDEKEWYVGKAQKKYERELELKGRFEQ 288
Query: 301 AMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFS 360
+MKE VDKFQG+NLYIKNL DSI D+KLKELFSEFGTITSCKVMRDPSGIS+GSGFVAFS
Sbjct: 289 SMKEVVDKFQGVNLYIKNLDDSIGDDKLKELFSEFGTITSCKVMRDPSGISRGSGFVAFS 348
Query: 361 TPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMY 420
T EEASRAL EMNGKM+VSKPLYVA+AQRKEERRARLQAQFSQMRPV+M PSV PRMPMY
Sbjct: 349 TSEEASRALTEMNGKMVVSKPLYVALAQRKEERRARLQAQFSQMRPVSMAPSVAPRMPMY 408
Query: 421 PPGPSGLGQQFLYGQAPPAIIPPQMPPRGHAYR-------YPLGRNMQDF---------- 463
PPG GLGQQ YGQ PPAIIPPQ G Y+ P G M +F
Sbjct: 409 PPGAPGLGQQLFYGQGPPAIIPPQA---GFGYQQQLVPGMRPGGAPMPNFFVPLVQQGQQ 465
Query: 464 ------------------PFDMGAGSMLP----------------VPVDMGAG------- 482
P + MLP VP+ AG
Sbjct: 466 GQRPGGRRGAGPVQQNQQPVPLMQQQMLPRGGRVYRYPPGRNMPDVPMPGVAGGMLSIPY 525
Query: 483 ----IPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGML 538
+P RDA++GQPMPI+AL++ALANA+P+QQRT+LGESLYPLV+QLE + AAKVTGML
Sbjct: 526 DMGGVPLRDAAIGQPMPISALASALANATPDQQRTMLGESLYPLVDQLEHEMAAKVTGML 585
Query: 539 LEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNPADQLASLSLNENLV 592
LEMDQTEVLHLLESPEALK+KVAEAM+VLR+VAQQQAN+P +QLASLSLN++LV
Sbjct: 586 LEMDQTEVLHLLESPEALKSKVAEAMDVLRNVAQQQANSPTEQLASLSLNDSLV 639
>gi|255555393|ref|XP_002518733.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223542114|gb|EEF43658.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 644
Score = 882 bits (2278), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/651 (70%), Positives = 514/651 (78%), Gaps = 65/651 (9%)
Query: 1 MAQIQVQHQAQMSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVR 60
MAQ+QV Q Q V GA+ ++TTSLYVGDL+ NVTDS LYDLF+QVGQV+SVR
Sbjct: 1 MAQVQVPVQGQ-----NVNGGANA-PYVTTSLYVGDLEANVTDSHLYDLFNQVGQVVSVR 54
Query: 61 VCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNI 120
VCRDL+TRRSLGYGYVNY++P DAARALD+LNFTPLN IRIMYSHRDPS+RKSG+GNI
Sbjct: 55 VCRDLTTRRSLGYGYVNYSSPQDAARALDMLNFTPLNGSPIRIMYSHRDPSVRKSGSGNI 114
Query: 121 FIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNG 180
FIKNLDK IDHKALHDTFS+FGNILSCK+ATD SGQSKG+GFVQF+N+ESAQ AI+KLNG
Sbjct: 115 FIKNLDKGIDHKALHDTFSAFGNILSCKVATDSSGQSKGYGFVQFDNEESAQKAIEKLNG 174
Query: 181 MLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVV 240
ML+NDKQV+VG FLRKQERE+ KT+FNNV+VKNL E+TT+EDLKK FGEYGTITSAVV
Sbjct: 175 MLLNDKQVYVGPFLRKQERESAIDKTRFNNVYVKNLSETTTEEDLKKAFGEYGTITSAVV 234
Query: 241 MRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQ 300
MRDGDGK+KCFGFVNFENADDAA AVEALNGKKFDD+EW+VGKAQKK+ERE ELK +FEQ
Sbjct: 235 MRDGDGKTKCFGFVNFENADDAATAVEALNGKKFDDKEWFVGKAQKKNERENELKVRFEQ 294
Query: 301 AMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFS 360
+MKE DKFQG NLYIKNL DSI D++LK+LFS FGTITSCKVMRDP+GIS+GSGFVAFS
Sbjct: 295 SMKEAADKFQGANLYIKNLDDSIGDDRLKQLFSPFGTITSCKVMRDPNGISRGSGFVAFS 354
Query: 361 TPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMY 420
TPEEAS+AL EMNGKM+VSKPLYVA+AQRKE+RRARLQAQFSQ+RPVAM PSV PRMPMY
Sbjct: 355 TPEEASKALMEMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIRPVAMAPSVAPRMPMY 414
Query: 421 PPGPSGLGQQFLYG-----------------QAPPAIIPPQMP----------------- 446
PPG GLGQQ YG Q P + P P
Sbjct: 415 PPGGPGLGQQIFYGQAPPAIIPPQPGFGYQQQLVPGMRPGGAPMPNFFVPMVQQGQQGQR 474
Query: 447 ----------------PRGHAYRYPLGR--------NMQDFPFDMGAGSMLPVPVDMGAG 482
P P GR + D P AG ML VP DM +G
Sbjct: 475 PGGRRAGAAQQSQQPVPLMQQQMVPRGRVYRYPPGRGIPDVPMTGVAGGMLSVPYDM-SG 533
Query: 483 IPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMD 542
+P RDA++ QP+PI AL++ALANASPEQQRT+LGE+LYPLVEQLE DAAAKVTGMLLEMD
Sbjct: 534 MPMRDAALSQPIPIGALASALANASPEQQRTMLGENLYPLVEQLEPDAAAKVTGMLLEMD 593
Query: 543 QTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNPADQLASLSLNENLVS 593
QTEVLHLLESPEALKAKVAEAMEVLRSV QQQA ADQLASLSLN+NLVS
Sbjct: 594 QTEVLHLLESPEALKAKVAEAMEVLRSVQQQQAGGAADQLASLSLNDNLVS 644
>gi|449438385|ref|XP_004136969.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
gi|449495630|ref|XP_004159899.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 649
Score = 866 bits (2238), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/652 (68%), Positives = 515/652 (78%), Gaps = 62/652 (9%)
Query: 1 MAQIQVQHQAQMSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVR 60
MAQ+ Q Q SG + A G + NQ +TTSLYVGDLD NVTDSQLYDLF+QVGQV+SVR
Sbjct: 1 MAQVPPQPQVPNSGADPAANGGA-NQHVTTSLYVGDLDVNVTDSQLYDLFNQVGQVVSVR 59
Query: 61 VCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNI 120
VCRDL++RRSLGYGYVNY+NP DA+RALDVLNFTPLN IR+MYSHRDPS+RKSG+GNI
Sbjct: 60 VCRDLTSRRSLGYGYVNYSNPVDASRALDVLNFTPLNGNPIRVMYSHRDPSVRKSGSGNI 119
Query: 121 FIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNG 180
FIKNLDK+IDHKALHDTFS+FG+ILSCK+ATD SGQSKGFGFVQF+ +E+A AI+KLNG
Sbjct: 120 FIKNLDKAIDHKALHDTFSAFGSILSCKVATDSSGQSKGFGFVQFDTEEAALKAIEKLNG 179
Query: 181 MLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVV 240
ML+NDKQVFVG FLRKQERE+V+ KTKFNNVFVKNL E+T++EDLK +FGE+G ITS VV
Sbjct: 180 MLLNDKQVFVGPFLRKQERESVSEKTKFNNVFVKNLAETTSEEDLKNMFGEFGPITSVVV 239
Query: 241 MRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQ 300
MRDG+GKSKCFGFVNFENADDAA++VEALNGKK D +EWYVGKAQKKSERE ELK +FEQ
Sbjct: 240 MRDGEGKSKCFGFVNFENADDAARSVEALNGKKVDGKEWYVGKAQKKSEREVELKSRFEQ 299
Query: 301 AMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFS 360
++KE DK+QG NLY+KNL DSIDD+KLKELF+ FGTITSCKVMRDP+GIS+GSGFVAFS
Sbjct: 300 SVKEAADKYQGANLYVKNLDDSIDDDKLKELFTGFGTITSCKVMRDPNGISRGSGFVAFS 359
Query: 361 TPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPR-MPM 419
+PEEA+RALAEMNG+MIVSKPLYVA+AQRKE+RRARLQAQFSQM+P+AM SV PR MPM
Sbjct: 360 SPEEAARALAEMNGRMIVSKPLYVALAQRKEDRRARLQAQFSQMQPMAMASSVAPRGMPM 419
Query: 420 YPPGPSGLGQQFLYGQAPPAIIPPQMPPRGHAYRY-----PLGRNMQDF----------- 463
YPPG G+GQQ YGQAPP II Q P G+ + P G M +F
Sbjct: 420 YPPGGPGIGQQIFYGQAPPTIISSQ-PGFGYQQQLMPGMRPGGGPMPNFFVPMVQQGQQG 478
Query: 464 ----------------PFDMGAGSMLP---------------VPVDMGAG---------- 482
P + MLP +P+ AG
Sbjct: 479 QRSGGRRAGAIQQTQQPVPLMQQQMLPRGRVYRYPPGRGLPDLPMPGVAGGMFSVPYEMG 538
Query: 483 -IPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEM 541
+P RDA QP+P+ AL++ALANA+P+QQRT+LGE+LYPLVEQLE D AAKVTGMLLEM
Sbjct: 539 GMPPRDAVHPQPVPVGALASALANATPDQQRTMLGENLYPLVEQLEPDNAAKVTGMLLEM 598
Query: 542 DQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNPADQLASLSLNENLVS 593
DQTEVLHLLESPEALKAKVAEAMEVLRSVA QQ+ N ADQLASLSL +NL S
Sbjct: 599 DQTEVLHLLESPEALKAKVAEAMEVLRSVA-QQSGNAADQLASLSLTDNLDS 649
>gi|224060514|ref|XP_002300227.1| predicted protein [Populus trichocarpa]
gi|222847485|gb|EEE85032.1| predicted protein [Populus trichocarpa]
Length = 644
Score = 865 bits (2235), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/650 (69%), Positives = 509/650 (78%), Gaps = 65/650 (10%)
Query: 1 MAQIQVQHQAQMSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVR 60
MAQ+QV Q P V AGA+ F+TTSLYVGDL+ +VTDSQLYDLF+QVGQV+SVR
Sbjct: 1 MAQVQVPVQ-----PQSVNAGANNPNFVTTSLYVGDLEASVTDSQLYDLFNQVGQVVSVR 55
Query: 61 VCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNI 120
VCRDL++RRSLGYGYVNY+NP DAARAL++LNFTPLN IR+MYSHRDP+IRKSG GNI
Sbjct: 56 VCRDLTSRRSLGYGYVNYSNPQDAARALEMLNFTPLNGSPIRVMYSHRDPTIRKSGAGNI 115
Query: 121 FIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNG 180
FIKNLDK+IDHKALHDTFS+FGNILSCK+ATD SGQSKG+GFVQF+++E+AQ AI+KLNG
Sbjct: 116 FIKNLDKAIDHKALHDTFSAFGNILSCKVATDPSGQSKGYGFVQFDSEEAAQKAIEKLNG 175
Query: 181 MLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVV 240
ML+NDKQV+VG FLRKQER+T K +FNNVFVKNL E+TT+EDL K FGE+GTITS VV
Sbjct: 176 MLLNDKQVYVGPFLRKQERDTATDKMRFNNVFVKNLSETTTEEDLNKTFGEFGTITSIVV 235
Query: 241 MRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQ 300
MRDGDGKSKCFGFVNFENA+DAAKAVEALNGKK DD+EW+VGKAQKK ERE ELK +FEQ
Sbjct: 236 MRDGDGKSKCFGFVNFENAEDAAKAVEALNGKKIDDKEWFVGKAQKKYEREVELKQRFEQ 295
Query: 301 AMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFS 360
+MKE DKFQG NLYIKNL DSI DEKLKELFS FGTITSCKVMRDP+GIS+GSGFVAFS
Sbjct: 296 SMKEAADKFQGANLYIKNLDDSIGDEKLKELFSPFGTITSCKVMRDPNGISRGSGFVAFS 355
Query: 361 TPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMY 420
TPEEASRAL EMNGK++VSKPLYVA+AQRKE+RRARLQAQFSQMRPVAM PSV PRMPMY
Sbjct: 356 TPEEASRALLEMNGKIVVSKPLYVALAQRKEDRRARLQAQFSQMRPVAMAPSVGPRMPMY 415
Query: 421 PPGPSGLGQQFLYG-----------------QAPPAIIPPQMP----------------- 446
PP GLGQQ YG Q P + P P
Sbjct: 416 PPAGPGLGQQIFYGQAPPAIIPPQPGFGYQQQLVPGMRPGGAPMPNFFVPMVQQGQQGQR 475
Query: 447 ----------------PRGHAYRYPLGR--------NMQDFPFDMGAGSMLPVPVDMGAG 482
P P GR + D P AG MLPVP DMG G
Sbjct: 476 PGGRRAGAGQQSQQPVPLMQQQMLPRGRVYRYPPGRGLPDVPMTGVAGGMLPVPYDMG-G 534
Query: 483 IPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMD 542
+P RDA++ Q +P+ AL+TALANA+P+QQRT+LGE+LYPLVEQLE +AAAKVTGMLLEMD
Sbjct: 535 MPMRDAALSQSIPVGALATALANATPDQQRTMLGENLYPLVEQLEPEAAAKVTGMLLEMD 594
Query: 543 QTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNPADQLASLSLNENLV 592
QTEVLHLLESPEALKAKV EAMEVLR+V QQQA ADQLASLSLN+NLV
Sbjct: 595 QTEVLHLLESPEALKAKVNEAMEVLRTV-QQQATGTADQLASLSLNDNLV 643
>gi|7673355|gb|AAF66823.1|AF190655_1 poly(A)-binding protein [Nicotiana tabacum]
Length = 649
Score = 863 bits (2231), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/634 (68%), Positives = 500/634 (78%), Gaps = 62/634 (9%)
Query: 20 AGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYA 79
AG NQF+T SLYVGDLD NVTDSQLYDLF+Q+GQV+SVRVCRDL+++RSLGYGYVNY
Sbjct: 18 AGGVNNQFVT-SLYVGDLDVNVTDSQLYDLFNQLGQVVSVRVCRDLTSQRSLGYGYVNYG 76
Query: 80 NPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFS 139
NP DAARAL+VLNFTPL+ K IRIMYS+RDP+IR+SG GNIFIKNLDK+IDHKALHDTFS
Sbjct: 77 NPQDAARALEVLNFTPLHGKPIRIMYSNRDPTIRRSGNGNIFIKNLDKAIDHKALHDTFS 136
Query: 140 SFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER 199
+FGNILSCK+A D SGQSKG+GFVQ++++E+AQ AI+KLNGML+NDKQV+VG F+RK ER
Sbjct: 137 AFGNILSCKVAVDSSGQSKGYGFVQYDSEEAAQKAIEKLNGMLLNDKQVYVGPFVRKHER 196
Query: 200 ETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ KT+F NVFVKNL EST +E+L+KIFGE+G ITS VM+D DGKS+CFGFVNFENA
Sbjct: 197 DMAVDKTRFTNVFVKNLSESTLEEELRKIFGEFGAITSVAVMKDEDGKSRCFGFVNFENA 256
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DAA+AVEALNG K D+++W+VG+AQKKSERE ELK +FEQ+ KE VDK QGLNLYIKNL
Sbjct: 257 EDAARAVEALNGYKLDNKDWFVGRAQKKSEREMELKHRFEQSAKEAVDKSQGLNLYIKNL 316
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
DSI DEKLKELFS +GTITSCKVMRDPSG+SKGSGFVAFS PEEASRAL+EMNGKM+VS
Sbjct: 317 DDSISDEKLKELFSPYGTITSCKVMRDPSGVSKGSGFVAFSNPEEASRALSEMNGKMVVS 376
Query: 380 KPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPA 439
KPLYVA+AQRKEERRARLQAQFSQMRP+AM SV PRMPMYPPG GLGQQ YGQ PA
Sbjct: 377 KPLYVALAQRKEERRARLQAQFSQMRPIAMASSVAPRMPMYPPGGPGLGQQIFYGQPQPA 436
Query: 440 IIPPQ-------------------MP---------------------------------P 447
++PPQ MP P
Sbjct: 437 MLPPQAGFGYQQQLVPGMRPGGGPMPNFFMPMVQQGQQGQRPGGRRGGAVPLQQGQQPVP 496
Query: 448 RGHAYRYPLGR--------NMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITAL 499
+P GR + D F G M +P DMG G+P RDA + QP+P+ AL
Sbjct: 497 LMQQQMFPRGRGYRYPPGRGLPDVAFPGVGGGMFSIPYDMG-GMPVRDAGIVQPIPVGAL 555
Query: 500 STALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAK 559
+TALAN+SP +QRT+LGE+LYPLVEQLE + AAKVTGMLLEMDQTEVLHLLESPEALKAK
Sbjct: 556 ATALANSSPTEQRTMLGENLYPLVEQLEPETAAKVTGMLLEMDQTEVLHLLESPEALKAK 615
Query: 560 VAEAMEVLRSVAQQQANNPADQLASLSLNENLVS 593
VAEAMEVLR+V+QQQ++NPADQLASLSLN+ LVS
Sbjct: 616 VAEAMEVLRNVSQQQSSNPADQLASLSLNDGLVS 649
>gi|7528270|gb|AAF63202.1|AF240679_1 poly(A)-binding protein [Cucumis sativus]
Length = 649
Score = 863 bits (2229), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/652 (68%), Positives = 514/652 (78%), Gaps = 62/652 (9%)
Query: 1 MAQIQVQHQAQMSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVR 60
MAQ+ Q Q SG + A G + NQ +TTSLYVGDLD NVTDSQLYDLF+QVGQV+SVR
Sbjct: 1 MAQVPPQPQVPNSGADPAANGGA-NQHVTTSLYVGDLDVNVTDSQLYDLFNQVGQVVSVR 59
Query: 61 VCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNI 120
VCRDL++RRSLGYGYVNY+NP DA+RALDVLNFTPLN IR+MYSHRDPS+RKSG+GNI
Sbjct: 60 VCRDLTSRRSLGYGYVNYSNPVDASRALDVLNFTPLNGNPIRVMYSHRDPSVRKSGSGNI 119
Query: 121 FIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNG 180
FIKNLDK+IDHKALHDTFS+FG+ILSCK+ATD SGQSKGFGFVQF+ +E+A AI+KLNG
Sbjct: 120 FIKNLDKAIDHKALHDTFSAFGSILSCKVATDSSGQSKGFGFVQFDTEEAALKAIEKLNG 179
Query: 181 MLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVV 240
ML+NDKQVFVG FLRKQERE+V+ KTKFNNVFVKNL E+T++EDLK +FGE+G ITS VV
Sbjct: 180 MLLNDKQVFVGPFLRKQERESVSEKTKFNNVFVKNLAETTSEEDLKNMFGEFGPITSVVV 239
Query: 241 MRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQ 300
MRDG+GKSKCFGFVNFENADDAA++VEALNGKK D +EWYVGKAQKKSERE ELK +FEQ
Sbjct: 240 MRDGEGKSKCFGFVNFENADDAARSVEALNGKKVDGKEWYVGKAQKKSEREVELKSRFEQ 299
Query: 301 AMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFS 360
++KE DK+QG NLY+KNL DSIDD+KLKELF+ FGTITSCKVMRDP+GIS+GSGFVAFS
Sbjct: 300 SVKEAADKYQGANLYVKNLDDSIDDDKLKELFTGFGTITSCKVMRDPNGISRGSGFVAFS 359
Query: 361 TPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPR-MPM 419
+PEEA+RALAEMNG+MIVSKPLYVA+AQRKE+R ARLQAQFSQM+P+AM SV PR MPM
Sbjct: 360 SPEEAARALAEMNGRMIVSKPLYVALAQRKEDRIARLQAQFSQMQPMAMASSVAPRGMPM 419
Query: 420 YPPGPSGLGQQFLYGQAPPAIIPPQMPPRGHAYRY-----PLGRNMQDF----------- 463
YPPG G+GQQ YGQAPP II Q P G+ + P G M +F
Sbjct: 420 YPPGGPGIGQQIFYGQAPPTIISSQ-PGFGYQQQLMPGMRPGGGPMPNFFVPMVQQGQQG 478
Query: 464 ----------------PFDMGAGSMLP---------------VPVDMGAG---------- 482
P + MLP +P+ AG
Sbjct: 479 QRSGGRRAGAIQQTQQPVPLMQQQMLPRGRVYRYPPGRGLPDLPMPGVAGGMFSVPYEMG 538
Query: 483 -IPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEM 541
+P RDA QP+P+ AL++ALANA+P+QQRT+LGE+LYPLVEQLE D AAKVTGMLLEM
Sbjct: 539 GMPPRDAVHPQPVPVGALASALANATPDQQRTMLGENLYPLVEQLEPDNAAKVTGMLLEM 598
Query: 542 DQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNPADQLASLSLNENLVS 593
DQTEVLHLLESPEALKAKVAEAMEVLRSVA QQ+ N ADQLASLSL +NL S
Sbjct: 599 DQTEVLHLLESPEALKAKVAEAMEVLRSVA-QQSGNAADQLASLSLTDNLDS 649
>gi|359386152|gb|AEV43365.1| poly A-binding protein 2 [Citrus sinensis]
Length = 652
Score = 860 bits (2222), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/658 (68%), Positives = 514/658 (78%), Gaps = 71/658 (10%)
Query: 1 MAQIQVQHQAQMS-------GPNGVAA-GASGN--QFLTTSLYVGDLDFNVTDSQLYDLF 50
MAQ+QVQ QA ++ NG+A G G+ QF++TSLYVGDLD +V DSQLYDLF
Sbjct: 1 MAQVQVQPQAPVAVAAQPSPATNGIANNGGVGDARQFVSTSLYVGDLDLSVNDSQLYDLF 60
Query: 51 SQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDP 110
+Q+GQV+SVRVCRDLSTRRSLGYGYVNY +A RALD LNFTPLN K IRIMYS+RDP
Sbjct: 61 NQMGQVVSVRVCRDLSTRRSLGYGYVNYNAAHEATRALDELNFTPLNGKPIRIMYSYRDP 120
Query: 111 SIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKES 170
+IRKSG GNIFIKNLDKSID+KALHDTFS+FGNILSCK+ATD GQS+G+GFVQF+N+ES
Sbjct: 121 TIRKSGAGNIFIKNLDKSIDNKALHDTFSTFGNILSCKVATDSLGQSRGYGFVQFDNEES 180
Query: 171 AQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFG 230
A++AIDKLNGML+NDKQVFVG FLRKQERE+ A KT+FNNV+VKNL E+TT++DLKKIFG
Sbjct: 181 AKSAIDKLNGMLLNDKQVFVGPFLRKQERESTADKTRFNNVYVKNLSETTTEDDLKKIFG 240
Query: 231 EYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSER 290
E+G ITS VMRD DGKSKCFGFVNF++ DDAA++VEALNGKKFDD+EWYVGKAQKK ER
Sbjct: 241 EFGIITSTAVMRDADGKSKCFGFVNFDDPDDAARSVEALNGKKFDDKEWYVGKAQKKYER 300
Query: 291 EQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGI 350
E ELKG+FEQ++KET DKF+GLNLY+KNL DSI D+KLKELFSEFGTITSCKVMRDP+GI
Sbjct: 301 EMELKGKFEQSLKETADKFEGLNLYVKNLDDSISDDKLKELFSEFGTITSCKVMRDPNGI 360
Query: 351 SKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMG 410
S+GSGFVAFST EEAS+AL EMNGKM+VSKPLYVA+AQRKEERRARLQAQFSQMRP
Sbjct: 361 SRGSGFVAFSTAEEASKALTEMNGKMVVSKPLYVALAQRKEERRARLQAQFSQMRP---- 416
Query: 411 PSVPPRMPMYPPGPSGLGQQFLY------------------------------------- 433
V PRMPMYPP GLGQQ Y
Sbjct: 417 -PVGPRMPMYPPVAPGLGQQLFYGQGPPIIPPQPGFGYQQQLVPGMRPNYFVPMVQPGQQ 475
Query: 434 ----------------GQAPPAIIPPQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPV 477
Q P ++ P+M PRG YRYP G N+ D P G MLP P
Sbjct: 476 NQRPGGRRSGTGPMQQAQQPIPLMQPRMLPRGRIYRYPPGCNIPDVPVAGVPGGMLPGPY 535
Query: 478 DMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGM 537
D+G G+P RDA+ QPM AL++ALANASPEQQRTLLGE+LYPLV+QLE D AAKVTGM
Sbjct: 536 DIG-GMPFRDAAFSQPMQTGALASALANASPEQQRTLLGENLYPLVDQLEHDNAAKVTGM 594
Query: 538 LLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNPA--DQLASLSLNENLVS 593
LLEMDQTEVLHLLESPEALKAKVAEAMEVLR+VAQQQA P+ D++ASLSLN+N+VS
Sbjct: 595 LLEMDQTEVLHLLESPEALKAKVAEAMEVLRNVAQQQATGPSPTDRVASLSLNDNIVS 652
>gi|13560783|gb|AAK30205.1|AF349964_1 poly(A)-binding protein [Daucus carota]
Length = 658
Score = 859 bits (2219), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/645 (68%), Positives = 510/645 (79%), Gaps = 68/645 (10%)
Query: 13 SGPNGVAAGASGN-----QFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLST 67
SG NGV+AGA+ N QF TTSLYVGDLD +VTDSQLYDLF+QVGQV+SVRVCRDLST
Sbjct: 18 SGSNGVSAGAAANAGGSNQFTTTSLYVGDLDQSVTDSQLYDLFNQVGQVVSVRVCRDLST 77
Query: 68 RRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDK 127
RSLGYGYVNY+N DA RA+DVLNFTPLNNK+IR+ S RDP+ RKSG GNIFIKNLDK
Sbjct: 78 GRSLGYGYVNYSNQQDATRAIDVLNFTPLNNKTIRVSVSRRDPTDRKSGAGNIFIKNLDK 137
Query: 128 SIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQ 187
SID KALH+TFSSFG I+SCKIATD SGQSKG+GFVQ++++E+AQ AIDKLNGML+NDKQ
Sbjct: 138 SIDIKALHETFSSFGTIISCKIATDASGQSKGYGFVQYDSEEAAQTAIDKLNGMLMNDKQ 197
Query: 188 VFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGK 247
V+VG FLRKQ+R++ KTKFNN++VKNL +ST+++DL+K FGEYGTITS VVMRD DGK
Sbjct: 198 VYVGVFLRKQDRDSEMSKTKFNNIYVKNLSDSTSEDDLRKTFGEYGTITSVVVMRDADGK 257
Query: 248 SKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVD 307
SKCFGFVNFEN +DAAKAV+ALNGKKFDD+EWYVGKAQKKSERE ELK +FEQ +KE VD
Sbjct: 258 SKCFGFVNFENPEDAAKAVDALNGKKFDDKEWYVGKAQKKSEREVELKSRFEQTVKEQVD 317
Query: 308 KFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASR 367
K+QG+NLY+KNL D+IDDEKLKELFSE+GTITSCKVMRDPSGIS+GSGFVAFSTPEEASR
Sbjct: 318 KYQGVNLYVKNLDDTIDDEKLKELFSEYGTITSCKVMRDPSGISRGSGFVAFSTPEEASR 377
Query: 368 ALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMY------- 420
AL EMNGKMIVSKPLYVA+AQRKEERRARLQAQFSQMRPVAM PS+ PRMPMY
Sbjct: 378 ALGEMNGKMIVSKPLYVALAQRKEERRARLQAQFSQMRPVAMPPSMGPRMPMYSPGAPGM 437
Query: 421 ---------PPG----PSGLG--QQFLYG------------------------------- 434
PP +G G QQ + G
Sbjct: 438 GQQLFYGQAPPAMIAPQAGFGYQQQLVPGMRPGGGPMPNFFMPMVQQGQQGQRPGGRRGA 497
Query: 435 ------QAPPAIIPPQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDA 488
Q P ++P Q+ PRG YR+P GRN+ D G MLPVP +MG +PR +A
Sbjct: 498 GPAQQTQQPVPMMPQQLMPRGRMYRFPPGRNVGDVTMPGVGGGMLPVPYNMGGMLPR-EA 556
Query: 489 SVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLH 548
++GQPMPITAL++ALANA +QQRT+LGE+LYPLV+QLE D AAKVTGMLLEMDQTEVLH
Sbjct: 557 AMGQPMPITALASALANAPADQQRTMLGENLYPLVDQLEHDHAAKVTGMLLEMDQTEVLH 616
Query: 549 LLESPEALKAKVAEAMEVLRSVAQQQANNPADQLASLSLNENLVS 593
LLESP+ALKAKVAEAM+VLR+V+Q N ADQL LSLNENLVS
Sbjct: 617 LLESPDALKAKVAEAMDVLRNVSQP---NVADQLGGLSLNENLVS 658
>gi|400234898|gb|AFP74112.1| poly-A binding protein, partial [Nicotiana benthamiana]
Length = 643
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/634 (67%), Positives = 497/634 (78%), Gaps = 68/634 (10%)
Query: 20 AGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYA 79
AG NQF+T SLYVGDLD NVTDSQLYDLF+Q+GQV+SVRVCRDL+++RSLGYGYVNY
Sbjct: 18 AGGVNNQFVT-SLYVGDLDVNVTDSQLYDLFNQLGQVVSVRVCRDLTSQRSLGYGYVNYG 76
Query: 80 NPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFS 139
NP DAARAL+VLNFTPL+ K IRIMYS+RDP+IR+SG GNIFIKNLDK+IDHKALHDTFS
Sbjct: 77 NPQDAARALEVLNFTPLHGKPIRIMYSNRDPTIRRSGNGNIFIKNLDKAIDHKALHDTFS 136
Query: 140 SFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER 199
+FGNILSCK+A D SGQSKG+GFVQ+++ E+AQ AI+KLNGML+NDKQV+VG F+RKQER
Sbjct: 137 AFGNILSCKVAVDSSGQSKGYGFVQYDSDEAAQKAIEKLNGMLLNDKQVYVGPFVRKQER 196
Query: 200 ETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ KT+F NVFVKNL EST +E+L+KIFGE+GTITS VM+D DGKS+CFGFVNFENA
Sbjct: 197 DMAVDKTRFTNVFVKNLSESTLEEELRKIFGEFGTITSVAVMKDEDGKSRCFGFVNFENA 256
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DAA+AVEALNG K D+++W+VG+AQKKSERE ELK +FEQ+ +E VDK QGLNLY+KNL
Sbjct: 257 EDAARAVEALNGYKLDNKDWFVGRAQKKSEREMELKHRFEQSAQEAVDKSQGLNLYLKNL 316
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
DSI D+KLKELFS +GTITSCKVMRDPSG+SKGSGFVAFSTPEEASRAL+EMNGKM+VS
Sbjct: 317 DDSISDDKLKELFSPYGTITSCKVMRDPSGVSKGSGFVAFSTPEEASRALSEMNGKMVVS 376
Query: 380 KPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPA 439
KPLYVA+AQRKEERRARLQAQFSQMRP+AM SV PRMPMYPPG GLGQQ YGQ PPA
Sbjct: 377 KPLYVALAQRKEERRARLQAQFSQMRPIAMASSVAPRMPMYPPGGPGLGQQIFYGQPPPA 436
Query: 440 IIPPQ-------------------MP---------------------------------P 447
++PPQ MP P
Sbjct: 437 MLPPQAGFGYQQQLVPGMRPGGGPMPNFFMPMVQQGQQGQRPGGRRGGAVPLQQGQQPVP 496
Query: 448 RGHAYRYPLGR--------NMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITAL 499
+P GR + D F G M +P D+G I QP+P+ AL
Sbjct: 497 LMQQQMFPRGRGYRYPPGRGLPDGAFPGVGGGMFSIPYDIGGRIV-------QPIPVGAL 549
Query: 500 STALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAK 559
+TALANASP +QRT+LGE+LYPLVEQLE + AAKVTGMLLEMDQTEVLHLLESPEALKAK
Sbjct: 550 ATALANASPTEQRTMLGENLYPLVEQLEPETAAKVTGMLLEMDQTEVLHLLESPEALKAK 609
Query: 560 VAEAMEVLRSVAQQQANNPADQLASLSLNENLVS 593
VAEAMEVLR+V+QQQ++NPADQLASLSLN+ LVS
Sbjct: 610 VAEAMEVLRNVSQQQSSNPADQLASLSLNDGLVS 643
>gi|449445890|ref|XP_004140705.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 654
Score = 850 bits (2195), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/654 (68%), Positives = 503/654 (76%), Gaps = 66/654 (10%)
Query: 3 QIQVQHQAQMSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVC 62
Q+Q Q Q +SG N A G G F+TTSLYVGDLD NVTDSQLYD+F+QVGQV+SVRVC
Sbjct: 4 QVQAQPQNAISGINPAANG--GANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRVC 61
Query: 63 RDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFI 122
RDL+TRRSLGYGYVNY+NP DAARALDVLNFTPLN K IR+MYSHRDPSIRKSG GNIFI
Sbjct: 62 RDLTTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIFI 121
Query: 123 KNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGML 182
KNLDK+IDHKALHDTFS+FG+ILSCK+A D SGQSKG+GFVQF+N+ESA AI+KLNGML
Sbjct: 122 KNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESALKAIEKLNGML 181
Query: 183 INDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMR 242
+NDKQV+VG FLRKQER+ V K+KFNNVFVKNL E+TT+EDL K F E+GT+TS VVMR
Sbjct: 182 LNDKQVYVGPFLRKQERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVMR 241
Query: 243 DGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAM 302
D DGKS+CFGFVNFENADDAA+AV+ LNGK DD+EWYVGKAQKKSERE ELK +FEQ M
Sbjct: 242 DADGKSRCFGFVNFENADDAARAVDTLNGKLVDDKEWYVGKAQKKSEREVELKHRFEQTM 301
Query: 303 KETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTP 362
KE DK+QG NLYIKNL DSI D+KLKELF+ FGTITSCKVMRDP+GIS+GSGFVAFSTP
Sbjct: 302 KEAADKYQGANLYIKNLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISRGSGFVAFSTP 361
Query: 363 EEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPP 422
+EASRAL EMNGKM+VSKPLYVA+AQRKE+RRARLQAQFSQ+R V M SV PRMP+YPP
Sbjct: 362 DEASRALVEMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIRSVPMPASVAPRMPIYPP 421
Query: 423 G------------------PS----GLGQQFLYGQAP-----PAIIPPQ----------- 444
G PS G QQ + G P P P
Sbjct: 422 GGPGIGQQLFYGQAPPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQGQQGQRPG 481
Query: 445 ---------------------MPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGI 483
+P G YRYP GR + D AG M VP DMG G+
Sbjct: 482 GRRAGAVQQTQQPVPMMQQQMLPRGGRVYRYPPGRGLPDVAMPGVAGGMFSVPYDMG-GM 540
Query: 484 PRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQ 543
P RDA+ QP+PI AL++ALANA+P+QQRT+LGE+LYPLVEQLE D AAKVTGMLLEMDQ
Sbjct: 541 PLRDAAHSQPIPIGALASALANATPDQQRTMLGENLYPLVEQLEPDNAAKVTGMLLEMDQ 600
Query: 544 TEVLHLLESPEALKAKVAEAMEVLRSV----AQQQANNPADQLASLSLNENLVS 593
TEVLHLLESPEALKAKVAEAMEVLR+V QQQA N ADQLASLSL ENLVS
Sbjct: 601 TEVLHLLESPEALKAKVAEAMEVLRNVAAAQQQQQAGNAADQLASLSLTENLVS 654
>gi|225428865|ref|XP_002285190.1| PREDICTED: polyadenylate-binding protein 2 [Vitis vinifera]
gi|147839912|emb|CAN65906.1| hypothetical protein VITISV_004873 [Vitis vinifera]
Length = 648
Score = 838 bits (2166), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/629 (69%), Positives = 490/629 (77%), Gaps = 62/629 (9%)
Query: 2 AQIQVQHQAQMSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRV 61
AQ+QVQ Q AAGA GNQF+TTSLYVGDL+ NV DSQLYDLFSQ+G V+SVRV
Sbjct: 3 AQVQVQPQGPGPA-PNGAAGAGGNQFVTTSLYVGDLELNVNDSQLYDLFSQMGAVVSVRV 61
Query: 62 CRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIF 121
CRDLSTRRSLGYGYVNY+NP DAARALDVLNFTPLN K IRIMYSHRDPSIRKSGTGNIF
Sbjct: 62 CRDLSTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRIMYSHRDPSIRKSGTGNIF 121
Query: 122 IKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGM 181
IKNLDK IDHKALHDTFS+FGNILSCK+ATD SG SKG GFVQF+++E+AQ AIDKLNGM
Sbjct: 122 IKNLDKGIDHKALHDTFSAFGNILSCKVATDASGMSKGHGFVQFDSEEAAQKAIDKLNGM 181
Query: 182 LINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVM 241
L+NDKQVFVG F+RKQERE+ K KFNNVFVKN+ E T+EDL +IFGE+G ITS VVM
Sbjct: 182 LLNDKQVFVGPFVRKQERESTINKEKFNNVFVKNISEGMTEEDLTRIFGEFGPITSVVVM 241
Query: 242 RDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQA 301
RDGDGKSKCFGFVNFEN DDAA +VEALNG+KFDD+EWYVGKAQKKSERE ELK +FEQ
Sbjct: 242 RDGDGKSKCFGFVNFENVDDAAMSVEALNGQKFDDKEWYVGKAQKKSEREIELKSRFEQN 301
Query: 302 MKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFST 361
MKE VDKFQG NLYIKNL DSI D+KLKELF++FGTITSCKVMRDP+G+S+GSGFVAFS+
Sbjct: 302 MKEAVDKFQGANLYIKNLDDSIGDDKLKELFAQFGTITSCKVMRDPNGLSRGSGFVAFSS 361
Query: 362 PEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYP 421
PEEASRALAEMN KM+VSKPLYVA+AQRKE+RRARLQAQFSQMRPV M PSV PR+PMYP
Sbjct: 362 PEEASRALAEMNSKMVVSKPLYVALAQRKEDRRARLQAQFSQMRPVPMPPSVVPRLPMYP 421
Query: 422 PGPSGLGQQFLYG-----------------QAPPAIIP--PQMP---------------- 446
P GLGQQ YG Q P + P P MP
Sbjct: 422 PSGPGLGQQMFYGQAPPAIIPPQPGFGYQQQLVPGMRPAGPPMPNFFVPIVQQGQQGQRP 481
Query: 447 -------------------------PRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGA 481
PRG +RYP GR + D P AG M+ VP DMG
Sbjct: 482 GGRRAGAVPMQQTQQQVPLMQQQMLPRGRVFRYPPGRGLSDVPMPGVAGGMVSVPYDMG- 540
Query: 482 GIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEM 541
G+P DA++ Q +P+ AL+TALANA P +QRT+LGE+LYPLVEQLE + AAKVTGMLLEM
Sbjct: 541 GMPLHDAAISQSIPVGALATALANAPPAEQRTMLGENLYPLVEQLEPEMAAKVTGMLLEM 600
Query: 542 DQTEVLHLLESPEALKAKVAEAMEVLRSV 570
DQTEVLHLLESP+ALKAKVAEAMEVLR+V
Sbjct: 601 DQTEVLHLLESPDALKAKVAEAMEVLRNV 629
>gi|356514396|ref|XP_003525892.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 630
Score = 822 bits (2122), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/638 (65%), Positives = 482/638 (75%), Gaps = 74/638 (11%)
Query: 15 PNGVAAGASGNQFLTT-SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGY 73
P AA + N +TT SLYVGDLD +V D QLYDLF+QV QV+SVR+CRD++T++SLGY
Sbjct: 8 PTNDAAASGANPSMTTISLYVGDLDHDVNDPQLYDLFNQVAQVVSVRICRDVATQQSLGY 67
Query: 74 GYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKA 133
GYVN++N DAA+A+DVLNFTPLN K+IRIMYS RDPS RKSG N+FIKNLDK+IDHKA
Sbjct: 68 GYVNFSNARDAAKAIDVLNFTPLNGKTIRIMYSIRDPSARKSGAANVFIKNLDKAIDHKA 127
Query: 134 LHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHF 193
L DTFS+FGNILSCKIATD SGQSKG GFVQFE++ESAQNAIDKLNGMLINDKQV+VG F
Sbjct: 128 LFDTFSAFGNILSCKIATDASGQSKGHGFVQFESEESAQNAIDKLNGMLINDKQVYVGPF 187
Query: 194 LRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGF 253
RKQ+RE+ TKFNNV+VKNL E+TT+ DLK IFGEYG ITSAVVMRD DGKSK FGF
Sbjct: 188 QRKQDRESALSGTKFNNVYVKNLFEATTEADLKSIFGEYGAITSAVVMRDVDGKSKGFGF 247
Query: 254 VNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLN 313
VNF N +DAAKAVEALNGK FD +EWYVGKAQKKSERE ELK + EQ+ KETVDK+ G N
Sbjct: 248 VNFANVEDAAKAVEALNGKNFDGKEWYVGKAQKKSERELELKERNEQSTKETVDKYHGTN 307
Query: 314 LYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMN 373
LYIKNL DS+ DE+L+ELFSEFGTITSCKVMRDPSGIS+GSGFVAFS E AS AL EMN
Sbjct: 308 LYIKNLDDSVGDEELRELFSEFGTITSCKVMRDPSGISRGSGFVAFSIAEGASWALGEMN 367
Query: 374 GKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLY 433
GKM+ KPLYVA+AQRKE+RRARLQAQFSQ RPVA+ P+V PRMP+YP G G+GQQ LY
Sbjct: 368 GKMVAGKPLYVALAQRKEDRRARLQAQFSQARPVAITPNVSPRMPLYPLGAPGIGQQLLY 427
Query: 434 GQAPPAIIP-----------PQMPP----------------------------------- 447
GQA P++IP P M P
Sbjct: 428 GQAAPSMIPQAAFGYQQHFVPGMRPGGAPNFYVPLVQQGQQGQRSGGQRGAGPMQQLQQP 487
Query: 448 ----------RGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDAS--VGQPMP 495
RGH YRYP G NMQ+ AG+P S +GQPMP
Sbjct: 488 LPLMHQQMLPRGHVYRYPPGSNMQNIQL---------------AGVPGGMVSYGIGQPMP 532
Query: 496 ITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEA 555
AL++ALANA+PEQQRT+LGE+LYPLV++LE + AAKVTGMLLEMDQ EVLHL+ESP+A
Sbjct: 533 TQALASALANATPEQQRTMLGEALYPLVDKLEHETAAKVTGMLLEMDQPEVLHLIESPDA 592
Query: 556 LKAKVAEAMEVLRSVAQQQANNPADQLASLSLNENLVS 593
LKAKV EAM+VLR V QQQ+N+PADQLASLSLN+N+ S
Sbjct: 593 LKAKVVEAMDVLRKVTQQQSNSPADQLASLSLNDNVES 630
>gi|356510461|ref|XP_003523956.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
gi|83853808|gb|ABC47841.1| poly(A)-binding protein [Glycine max]
Length = 630
Score = 821 bits (2120), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/639 (65%), Positives = 479/639 (74%), Gaps = 70/639 (10%)
Query: 12 MSGPNGVAAGASGNQFLTT-SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRS 70
+ P AA + N LTT SLYVGDL +V D QLYDLF+QV QV+SVR+CRD++T++S
Sbjct: 5 LENPTIDAAASGANPSLTTISLYVGDLHHDVNDPQLYDLFNQVAQVVSVRICRDVATQQS 64
Query: 71 LGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSID 130
LGYGYVN++N DAA+A+DVLNFTPLN K IRIMYS RDPS RKSG N+FIKNLDK+ID
Sbjct: 65 LGYGYVNFSNAHDAAKAIDVLNFTPLNGKIIRIMYSIRDPSARKSGAANVFIKNLDKAID 124
Query: 131 HKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFV 190
HKAL+DTFS+FGNILSCK+ATD SGQSKG GFVQFE++ESAQNAIDKLNGMLINDKQVFV
Sbjct: 125 HKALYDTFSAFGNILSCKVATDASGQSKGHGFVQFESEESAQNAIDKLNGMLINDKQVFV 184
Query: 191 GHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKC 250
G FLRKQ+RE+ TKFNNVFVKNL +S T+ DL++IFGEYG ITSAVVMRD DGKSK
Sbjct: 185 GPFLRKQDRESALSGTKFNNVFVKNLLDSMTEADLERIFGEYGAITSAVVMRDVDGKSKG 244
Query: 251 FGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQ 310
FGFVNF N DDAAKAVEALNGK FD +EWYVGKAQKKSERE ELKGQ EQ KETVDK+
Sbjct: 245 FGFVNFANVDDAAKAVEALNGKNFDGKEWYVGKAQKKSERELELKGQHEQITKETVDKYH 304
Query: 311 GLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALA 370
G NLYIKNL DS+ DE+L ELFSEFGTITSCKVMRDP+GIS+GSGFV+FS E A+RAL
Sbjct: 305 GTNLYIKNLDDSVGDEELMELFSEFGTITSCKVMRDPNGISRGSGFVSFSIAEGATRALG 364
Query: 371 EMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQ 430
EMNGKM+ KPLYVA+AQRKE+RRARLQAQFSQ RP A+ P+V PRMP+YP G +GQQ
Sbjct: 365 EMNGKMVAGKPLYVALAQRKEDRRARLQAQFSQSRPAAITPNVSPRMPLYPLGAPAIGQQ 424
Query: 431 FLYGQAPPAIIP-----------PQMPP-------------------------------- 447
FLYGQA PA IP P M P
Sbjct: 425 FLYGQAAPATIPQAAFGYQQHFVPGMRPGGAPNFYVPLVQQGQQGQRPGGHRGSGPMQQL 484
Query: 448 -------------RGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPM 494
RGH YRYP G NMQ+ G M+ +GQ M
Sbjct: 485 QQPLPLMHQQMLPRGHVYRYPSGSNMQNIQLAGVPGGMVTY-------------GIGQQM 531
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P AL++ALANA+PEQQRT+LGE+LYPLV++LE +AAAKVTGMLLEMDQ EVLHL+ESP+
Sbjct: 532 PTQALASALANATPEQQRTMLGEALYPLVDKLEHEAAAKVTGMLLEMDQPEVLHLIESPD 591
Query: 555 ALKAKVAEAMEVLRSVAQQQANNPADQLASLSLNENLVS 593
ALKAKV EAM+VL+ V QQQ+N+PADQLASLSLN+N+ S
Sbjct: 592 ALKAKVVEAMDVLKKVTQQQSNSPADQLASLSLNDNVES 630
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 58/107 (54%), Gaps = 1/107 (0%)
Query: 2 AQIQVQHQAQMSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRV 61
AQ + + + ++ G + + +++ T+LY+ +LD +V D +L +LFS+ G + S +V
Sbjct: 278 AQKKSERELELKGQHEQITKETVDKYHGTNLYIKNLDDSVGDEELMELFSEFGTITSCKV 337
Query: 62 CRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHR 108
RD S G G+V+++ A RAL +N + K + + + R
Sbjct: 338 MRD-PNGISRGSGFVSFSIAEGATRALGEMNGKMVAGKPLYVALAQR 383
>gi|357465579|ref|XP_003603074.1| Poly(A)-binding protein [Medicago truncatula]
gi|355492122|gb|AES73325.1| Poly(A)-binding protein [Medicago truncatula]
Length = 622
Score = 814 bits (2102), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/636 (66%), Positives = 480/636 (75%), Gaps = 81/636 (12%)
Query: 16 NGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGY 75
N VAA NQ TTSLYVGDLD +VTDSQLYDLF+Q+GQV+SVR+CRDL++++SLGYGY
Sbjct: 10 NDVAAAPVPNQLTTTSLYVGDLDHDVTDSQLYDLFNQIGQVVSVRICRDLASQQSLGYGY 69
Query: 76 VNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALH 135
VN++NP DAA+A+DVLNFTPLNNK IRIMYSHRDPS+RKSG NIFIKNLD++IDHKAL+
Sbjct: 70 VNFSNPHDAAKAMDVLNFTPLNNKPIRIMYSHRDPSVRKSGAANIFIKNLDRAIDHKALY 129
Query: 136 DTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLR 195
DTFS FGNILSCKIA D SG SKG+GFVQFEN+ESAQ+AIDKLNGML+NDK V+VGHF R
Sbjct: 130 DTFSIFGNILSCKIAMDASGLSKGYGFVQFENEESAQSAIDKLNGMLLNDKPVYVGHFQR 189
Query: 196 KQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVN 255
KQ+R+ KFNNV+VKNL ES TD+DLK FGEYGTITSAVVMRD DGKSKCFGFVN
Sbjct: 190 KQDRDNALSNAKFNNVYVKNLSESVTDDDLKNTFGEYGTITSAVVMRDVDGKSKCFGFVN 249
Query: 256 FENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLY 315
FENAD AA+AVEALNGKKFDD+EWYVGKA KK ERE ELK + EQ+MKETVDKF G NLY
Sbjct: 250 FENADAAAEAVEALNGKKFDDKEWYVGKALKKYERELELKERHEQSMKETVDKFYGANLY 309
Query: 316 IKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGK 375
+KNL DS+ DEKL ELFSEFGT+TSCK++RDP GIS+GSGFVAFSTPEEA+RALAEMNGK
Sbjct: 310 LKNLDDSVTDEKLSELFSEFGTVTSCKILRDPQGISRGSGFVAFSTPEEATRALAEMNGK 369
Query: 376 MIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQ 435
M+ KPLYVA AQ+KEER+ARLQAQFSQ+RPV M P + PR+P YP G G+GQQ +YGQ
Sbjct: 370 MVAGKPLYVAPAQKKEERKARLQAQFSQVRPVTMAP-IAPRLPFYPAGVPGMGQQIMYGQ 428
Query: 436 APPAII-------PPQMPP----------------------------------------- 447
APPA I P Q+ P
Sbjct: 429 APPAFISQAGFGYPQQLVPGMRPGGAPMPNFFMPMVQQGQQGQRPGGRRGASPMQQLPHS 488
Query: 448 ----------RGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPIT 497
RG YRYP GRN Q GIP + G PM
Sbjct: 489 LPMMQQQMHPRGRVYRYPTGRNPQ--------------------GIPMPGVAGGTPM--Q 526
Query: 498 ALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALK 557
AL+TALANA PEQQRT+LGE LYPLVE++E AAKVTGMLLEMDQ EVLHL+ESPEALK
Sbjct: 527 ALATALANAPPEQQRTMLGEVLYPLVEKIEHAGAAKVTGMLLEMDQPEVLHLIESPEALK 586
Query: 558 AKVAEAMEVLRSVAQQQANNPADQLASLSLNENLVS 593
KVAEA++VLR+VAQQQ+N+P DQLASLSLN+NL S
Sbjct: 587 TKVAEAVDVLRNVAQQQSNSPTDQLASLSLNDNLES 622
>gi|240256156|ref|NP_195137.5| Polyadenylate-binding protein 2 [Arabidopsis thaliana]
gi|1171978|sp|P42731.1|PABP2_ARATH RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2
gi|304109|gb|AAA61780.1| poly(A)-binding protein [Arabidopsis thaliana]
gi|2911051|emb|CAA17561.1| poly(A)-binding protein [Arabidopsis thaliana]
gi|7270360|emb|CAB80128.1| poly(A)-binding protein [Arabidopsis thaliana]
gi|26983870|gb|AAN86187.1| putative polyadenylate-binding protein 2 (PABP2) [Arabidopsis
thaliana]
gi|332660925|gb|AEE86325.1| Polyadenylate-binding protein 2 [Arabidopsis thaliana]
Length = 629
Score = 809 bits (2089), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/647 (64%), Positives = 487/647 (75%), Gaps = 77/647 (11%)
Query: 1 MAQIQVQHQAQMSGPNGVAA----------GASGNQFLTTSLYVGDLDFNVTDSQLYDLF 50
MAQ+Q+Q Q PNG A GA+ QF TSLYVGDLDFNVTDSQL+D F
Sbjct: 1 MAQVQLQGQT----PNGSTAAVTSAPATSGGATATQFGNTSLYVGDLDFNVTDSQLFDAF 56
Query: 51 SQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDP 110
Q+G V++VRVCRDL TRRSLGYGYVN+ NP DAARA+ LN+ PL K IR+MYSHRDP
Sbjct: 57 GQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARAIQELNYIPLYGKPIRVMYSHRDP 116
Query: 111 SIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKES 170
S+R+SG GNIFIKNLD+SIDHKALHDTFSSFGNI+SCK+A D SGQSKG+GFVQ+ N+ES
Sbjct: 117 SVRRSGAGNIFIKNLDESIDHKALHDTFSSFGNIVSCKVAVDSSGQSKGYGFVQYANEES 176
Query: 171 AQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFG 230
AQ AI+KLNGML+NDKQV+VG FLR+QER++ A KTKF NV+VKNL ESTTD+DLK FG
Sbjct: 177 AQKAIEKLNGMLLNDKQVYVGPFLRRQERDSTANKTKFTNVYVKNLAESTTDDDLKNAFG 236
Query: 231 EYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSER 290
EYG ITSAVVM+DG+GKSK FGFVNFENADDAA+AVE+LNG KFDD+EWYVG+AQKKSER
Sbjct: 237 EYGKITSAVVMKDGEGKSKGFGFVNFENADDAARAVESLNGHKFDDKEWYVGRAQKKSER 296
Query: 291 EQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGI 350
E EL+ ++EQ +KE DKFQ NLY+KNL SI DEKLKE+FS FGT+TS KVMRDP+G
Sbjct: 297 ETELRVRYEQNLKEAADKFQSSNLYVKNLDPSISDEKLKEIFSPFGTVTSSKVMRDPNGT 356
Query: 351 SKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMG 410
SKGSGFVAF+TPEEA+ A+++++GKMI SKPLYVA+AQRKE+RR RLQAQFSQ+RPVAM
Sbjct: 357 SKGSGFVAFATPEEATEAMSQLSGKMIESKPLYVAIAQRKEDRRVRLQAQFSQVRPVAMQ 416
Query: 411 PSVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPPQ------------MPPRG--------- 449
PSV PRMP+YPPG G+GQQ YGQAPPA+IPPQ M P G
Sbjct: 417 PSVGPRMPVYPPGGPGIGQQMFYGQAPPAMIPPQPGYGYQQQLVPGMRPGGGPVPSFFMP 476
Query: 450 -------------------HA---------YRYPLGRNMQDFPFDMGAGSMLPVPVDMGA 481
H+ +P GR M +P G +P P DMG
Sbjct: 477 MVQPQQQRPGGGRRPGGIQHSQQQNPMMQQQMHPRGR-MFRYPQGRGGSGDVP-PYDMGN 534
Query: 482 GIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEM 541
+ P+ I AL++ L+NA+PEQQRT+LGE LYPLVEQ+E ++AAKVTGMLLEM
Sbjct: 535 NM---------PLTIGALASNLSNATPEQQRTMLGEVLYPLVEQVEAESAAKVTGMLLEM 585
Query: 542 DQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNPADQLASLSLN 588
DQTEVLHLLESPEALKAKVAEAM+VLRSVA A +QLASL+L+
Sbjct: 586 DQTEVLHLLESPEALKAKVAEAMDVLRSVA---AGGATEQLASLNLS 629
>gi|115475838|ref|NP_001061515.1| Os08g0314800 [Oryza sativa Japonica Group]
gi|35215045|dbj|BAC92404.1| putative polyadenylate-binding protein [Oryza sativa Japonica
Group]
gi|35215184|dbj|BAC92537.1| putative polyadenylate-binding protein [Oryza sativa Japonica
Group]
gi|113623484|dbj|BAF23429.1| Os08g0314800 [Oryza sativa Japonica Group]
gi|215694402|dbj|BAG89395.1| unnamed protein product [Oryza sativa Japonica Group]
gi|258644698|dbj|BAI39945.1| putative poly(A)-binding protein [Oryza sativa Indica Group]
Length = 660
Score = 806 bits (2082), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/627 (65%), Positives = 483/627 (77%), Gaps = 62/627 (9%)
Query: 27 FLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAAR 86
F TSLYVGDLD +V D+QL+D+FSQVG V+SVRVCRD++TR SLGY YVN+++PADAAR
Sbjct: 36 FQATSLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAAR 95
Query: 87 ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
AL++LNFTP+N K IRIMYS+RDPS RKSG NIFIKNLDKSID+KAL+DTFS FGNILS
Sbjct: 96 ALEMLNFTPINGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSVFGNILS 155
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKT 206
CK+AT+ SG+SKG+GFVQFE +E+AQNAI KLNGML+NDK+V+VG F+RKQERE V+
Sbjct: 156 CKVATEMSGESKGYGFVQFELEEAAQNAISKLNGMLLNDKKVYVGPFVRKQERENVSGNP 215
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
KFNNV+VKNL ESTT+++LK+IFG++G ITS VVMR+GDGKS+CFGFVNFEN DDAA+AV
Sbjct: 216 KFNNVYVKNLSESTTEDNLKEIFGKFGPITSVVVMREGDGKSRCFGFVNFENPDDAARAV 275
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSI-DD 325
E LNGKKFDD+EWYV +AQKKSERE ELK +FE+ +KE DK QG NLY+KNL DSI DD
Sbjct: 276 EDLNGKKFDDKEWYVCRAQKKSEREMELKEKFEKNIKEAADKNQGTNLYLKNLDDSIDDD 335
Query: 326 EKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVA 385
EKLKE+F++FGTITSCKVMRD +G+SKGSGFVAF + E+ASRAL MNGKMI SKPLYVA
Sbjct: 336 EKLKEIFADFGTITSCKVMRDLNGVSKGSGFVAFKSAEDASRALVAMNGKMIGSKPLYVA 395
Query: 386 VAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPPQ- 444
+AQRKEERRARLQAQFSQMRP+ M PSV PRMPMYPPG G+GQQ YGQ PPA + PQ
Sbjct: 396 LAQRKEERRARLQAQFSQMRPMVMPPSVAPRMPMYPPGVPGVGQQLFYGQPPPAFVNPQP 455
Query: 445 -----------------------MP-------------------------PRGH------ 450
MP P GH
Sbjct: 456 GFGFQQHLIPGMRPSVGPIPNFVMPMVQQGQQPQRPAGRRAGTGGIQQPMPMGHQQMLPR 515
Query: 451 ----AYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALSTALANA 506
YRY GR M D F G G ++P P +MG +P DA +PI AL++ALAN+
Sbjct: 516 GSRGGYRYASGRGMPDNAF-RGVGGLVPSPYEMGR-MPLSDAGAPPQVPIGALASALANS 573
Query: 507 SPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEV 566
P+QQR +LGESLYPLV+QLE D AAKVTGMLLEMDQTEVLHL+ESP+ALKAKVAEAMEV
Sbjct: 574 PPDQQRLMLGESLYPLVDQLEHDQAAKVTGMLLEMDQTEVLHLIESPDALKAKVAEAMEV 633
Query: 567 LRSVAQQQANNPADQLASLSLNENLVS 593
LR+ QQQAN P DQLA+L+L++ +VS
Sbjct: 634 LRNAQQQQANTPTDQLAALTLSDGVVS 660
>gi|224105583|ref|XP_002313862.1| predicted protein [Populus trichocarpa]
gi|222850270|gb|EEE87817.1| predicted protein [Populus trichocarpa]
Length = 642
Score = 805 bits (2078), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/652 (67%), Positives = 495/652 (75%), Gaps = 73/652 (11%)
Query: 1 MAQIQVQHQAQMSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVR 60
MAQ+QV Q P V GA+ F+TTSLYVGDL+ NVTDSQLYDLF+QVGQV+SVR
Sbjct: 1 MAQVQVPAQ-----PQNVNGGANNPNFVTTSLYVGDLEANVTDSQLYDLFNQVGQVVSVR 55
Query: 61 VCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNI 120
VCRDL++RRSLGYGYVNY+NP DAARAL+VLNFTP+N IR+MYSHRDPS+RKSG GNI
Sbjct: 56 VCRDLTSRRSLGYGYVNYSNPQDAARALEVLNFTPVNGSPIRVMYSHRDPSVRKSGAGNI 115
Query: 121 FIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNG 180
FIKNLDK+IDHKALHDTFS FGNILSCK+ATD SGQSKG+GFVQF+++E+AQ AI+KLNG
Sbjct: 116 FIKNLDKAIDHKALHDTFSVFGNILSCKVATDPSGQSKGYGFVQFDSEEAAQKAIEKLNG 175
Query: 181 MLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVV 240
ML+NDKQV+VG FLRKQER+T KT+FNNVFVKNL E+T +EDL K FGE+GTITS VV
Sbjct: 176 MLLNDKQVYVGPFLRKQERDTATDKTRFNNVFVKNLSETTAEEDLNKAFGEFGTITSVVV 235
Query: 241 MRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQ 300
MRDGDGKS+CFGFVNFENADDAAKA EALNGKKFDD+EW+VGKAQKK ERE ELK +FEQ
Sbjct: 236 MRDGDGKSRCFGFVNFENADDAAKAAEALNGKKFDDKEWFVGKAQKKYEREVELKQRFEQ 295
Query: 301 AMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFS 360
+MKE DKFQG NLYIKNL DSI DEK+KELFS FGTITSCKVMRDP+GIS+GSGFVAFS
Sbjct: 296 SMKEAADKFQGANLYIKNLDDSIGDEKIKELFSPFGTITSCKVMRDPNGISRGSGFVAFS 355
Query: 361 TPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRAR------------LQAQFSQMRPV- 407
TPEEASRAL EMNGKM+ SKPLYVA+AQRKE+RRAR LQ Q P+
Sbjct: 356 TPEEASRALLEMNGKMVASKPLYVALAQRKEDRRARLSFLKCDQLQWHLQLVVCQCTPLL 415
Query: 408 ------------AMGPSVPPRMPMYPPGPSGLGQQFLYGQAP-----PAIIPPQ------ 444
A S PR+P + G QQ + G P P P
Sbjct: 416 VPVLDNKYSMDKAHLLSCHPRLPGF-----GYQQQLVPGMRPGGAPMPNFFVPMVQQGQQ 470
Query: 445 -------------------------MPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDM 479
M PRG YRYP GR + D P AG ML VP DM
Sbjct: 471 GQRPGGRRAGTGQQSQQPVQLMQQQMLPRGRVYRYPPGRGLPDVPMTGVAGGMLSVPYDM 530
Query: 480 GAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLL 539
G G+P RDA++ QP+PI AL+TALANA+P+QQRT+LGE+LYPLVEQLE +AAAKVTGMLL
Sbjct: 531 G-GMPMRDAALSQPIPIGALATALANATPDQQRTMLGENLYPLVEQLEPEAAAKVTGMLL 589
Query: 540 EMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNPADQLASLSLNENL 591
EMDQTEVLHLLESPEALK+KV EAMEVLR+V QQQA ADQLASLSLN+NL
Sbjct: 590 EMDQTEVLHLLESPEALKSKVNEAMEVLRTV-QQQATGTADQLASLSLNDNL 640
>gi|19347816|gb|AAL86321.1| putative poly(A)-binding protein [Arabidopsis thaliana]
Length = 613
Score = 801 bits (2069), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/620 (65%), Positives = 476/620 (76%), Gaps = 63/620 (10%)
Query: 18 VAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVN 77
+ GA+ QF TSLYVGDLDFNVTDSQL+D F Q+G V++VRVCRDL TRRSLGYGYVN
Sbjct: 8 TSGGATATQFGNTSLYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVN 67
Query: 78 YANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDT 137
+ NP DAARA+ LN+ PL K IR+MYSHRDPS+R+SG GNIFIKNLD+SIDHKALHDT
Sbjct: 68 FTNPQDAARAIQELNYIPLYGKPIRVMYSHRDPSVRRSGAGNIFIKNLDESIDHKALHDT 127
Query: 138 FSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQ 197
FSSFGNI+SCK+A D SGQSKG+GFVQ+ N+ESAQ AI+KLNGML+NDKQV+VG FLR+Q
Sbjct: 128 FSSFGNIVSCKVAVDSSGQSKGYGFVQYANEESAQKAIEKLNGMLLNDKQVYVGPFLRRQ 187
Query: 198 ERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFE 257
ER++ A KTKF NV+VKNL ESTTD+DLK FGEYG ITSAVVM+DG+GKSK FGFVNFE
Sbjct: 188 ERDSTANKTKFTNVYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGEGKSKGFGFVNFE 247
Query: 258 NADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIK 317
NADDAA+AVE+LNG KFDD+EWYVG+AQKKSERE EL+ ++EQ +KE DKFQ NLY+K
Sbjct: 248 NADDAARAVESLNGHKFDDKEWYVGRAQKKSERETELRVRYEQNLKEAADKFQSSNLYVK 307
Query: 318 NLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMI 377
NL SI DEKLKE+FS FGT+TS KVMRDP+G SKGSGFVAF+TPEEA+ A+++++GKMI
Sbjct: 308 NLDPSISDEKLKEIFSPFGTVTSSKVMRDPNGTSKGSGFVAFATPEEATEAMSQLSGKMI 367
Query: 378 VSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAP 437
SKPLYVA+AQRKE+RR RLQAQFSQ+RPVAM PSV PRMP+YPPG G+GQQ YGQAP
Sbjct: 368 ESKPLYVAIAQRKEDRRVRLQAQFSQVRPVAMQPSVGPRMPVYPPGGPGIGQQMFYGQAP 427
Query: 438 PAIIPPQ------------MPPRG----------------------------HA------ 451
PA+IPPQ M P G H+
Sbjct: 428 PAMIPPQPGYGYQQQLVPGMRPGGGPVPSFFMPMVQPQQQRPGGGRRPGGIQHSQQQNPM 487
Query: 452 ---YRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALSTALANASP 508
+P GR M +P G +P P DMG + P+ I AL++ L+NA+P
Sbjct: 488 MQQQMHPRGR-MFRYPQGRGGSGDVP-PYDMGNNM---------PLTIGALASNLSNATP 536
Query: 509 EQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLR 568
EQQRT+LGE LYPLVEQ+E ++AAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAM+VLR
Sbjct: 537 EQQRTMLGEVLYPLVEQVEAESAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMDVLR 596
Query: 569 SVAQQQANNPADQLASLSLN 588
SVA A +QLASL+L+
Sbjct: 597 SVA---AGGATEQLASLNLS 613
>gi|414588971|tpg|DAA39542.1| TPA: hypothetical protein ZEAMMB73_983793 [Zea mays]
Length = 648
Score = 795 bits (2054), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/619 (64%), Positives = 484/619 (78%), Gaps = 55/619 (8%)
Query: 27 FLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAAR 86
F TSLYVGDL +V D+QL+D+FSQVG V+SVRVCRD+++R+SLGY YVNY N DAAR
Sbjct: 32 FPATSLYVGDLHESVQDAQLFDVFSQVGGVVSVRVCRDINSRKSLGYAYVNYNNQGDAAR 91
Query: 87 ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
AL++LNFTP+N K IRIMYS+RDPS RKSGTGNIFIKNLDKSID+KAL+DTF +FGNILS
Sbjct: 92 ALELLNFTPINGKPIRIMYSNRDPSSRKSGTGNIFIKNLDKSIDNKALYDTFCAFGNILS 151
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKT 206
CKIATD SG+S+G+GFVQFE ESAQ+AIDKLNGMLINDK+VFVG F+RKQ+RE V+
Sbjct: 152 CKIATDPSGESRGYGFVQFEKDESAQSAIDKLNGMLINDKKVFVGPFVRKQDRENVSSNI 211
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
KF+NV+VKNL ++ TD++LK++FG+YGTITSAVVMRD DGKS+CFGFVNFENAD AA+AV
Sbjct: 212 KFSNVYVKNLSDTVTDDELKEMFGKYGTITSAVVMRDSDGKSRCFGFVNFENADAAAQAV 271
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
+ LNGK F+D+E YVG+AQKKSERE ELK +FE+ ++E +KFQ NLY+KNL ++IDDE
Sbjct: 272 QELNGKIFNDKELYVGRAQKKSEREMELKEKFEKNVQEVAEKFQNTNLYLKNLEENIDDE 331
Query: 327 KLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 386
KL+ELF+E+G ITSCKVMRD +G+S+GSGFVAF + E+A+RAL EMNGKM+ SKPLYVA+
Sbjct: 332 KLRELFAEYGNITSCKVMRDSNGVSRGSGFVAFKSAEDANRALTEMNGKMVGSKPLYVAL 391
Query: 387 AQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPPQMP 446
AQRKE+R+A+LQAQFSQMRPVAM PSV PRMPM+PPG G+GQQ YGQ PPA I PQ P
Sbjct: 392 AQRKEDRKAKLQAQFSQMRPVAMAPSVGPRMPMFPPGVPGVGQQLFYGQPPPAFINPQQP 451
Query: 447 -------------------------------------------------PR-GHAYRYPL 456
PR G YRYP
Sbjct: 452 LMPGMRPGGPMPNFMMPMVQQGQQPQRPAGRRAGGMQQPMPMGGQQQVFPRGGRGYRYPT 511
Query: 457 GRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLG 516
GR M D P G+++P +MG G+P R+A+ QP+PI AL+TALANA P+QQR +LG
Sbjct: 512 GRGMPD-PGMHSVGAVMPPSYEMG-GMPMREAAP-QPVPIGALATALANAPPDQQRLMLG 568
Query: 517 ESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQAN 576
E+LYPLVEQLER+ AAKVTGMLLEMDQTEVLHLLESP+ALKAKVAEAMEVLRS Q +
Sbjct: 569 ENLYPLVEQLEREQAAKVTGMLLEMDQTEVLHLLESPDALKAKVAEAMEVLRSAQHLQQS 628
Query: 577 NPA--DQLASLSLNENLVS 593
N + QLA+LSLN+ +VS
Sbjct: 629 NVSTEQQLANLSLNDGVVS 647
>gi|297741250|emb|CBI32381.3| unnamed protein product [Vitis vinifera]
Length = 766
Score = 794 bits (2051), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/630 (66%), Positives = 473/630 (75%), Gaps = 84/630 (13%)
Query: 1 MAQIQVQHQAQMSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVR 60
MA++Q H+ +SG N ++F + SLYVGDLD NVTDSQL+DLFSQ+ QV+S+R
Sbjct: 142 MAEVQ-DHEGLLSGTND-EPNIGPSRFASASLYVGDLDLNVTDSQLHDLFSQLAQVVSIR 199
Query: 61 VCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNI 120
VCRD +T RSLGYGYVNY + DAARALDVLNFTPLN K IRIMYSHRDPSIRKSGTGNI
Sbjct: 200 VCRDSTTHRSLGYGYVNYTDLEDAARALDVLNFTPLNGKPIRIMYSHRDPSIRKSGTGNI 259
Query: 121 FIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNG 180
FIKNLDK IDHKALHDTFS+FGNILSCK+ATD SG SKG GFVQF+++E+AQ AIDKLNG
Sbjct: 260 FIKNLDKGIDHKALHDTFSAFGNILSCKVATDASGMSKGHGFVQFDSEEAAQKAIDKLNG 319
Query: 181 MLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVV 240
ML+NDKQVFVG F+RKQERE+ K KFNNVFVKN+ E T+EDL +IFGE+G ITS VV
Sbjct: 320 MLLNDKQVFVGPFVRKQERESTINKEKFNNVFVKNISEGMTEEDLTRIFGEFGPITSVVV 379
Query: 241 MRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQ 300
MRDGDGKSKCFGFVNFEN DDAA +VEALNG+KFDD+EWYVGKAQKKSERE ELK +FEQ
Sbjct: 380 MRDGDGKSKCFGFVNFENVDDAAMSVEALNGQKFDDKEWYVGKAQKKSEREIELKSRFEQ 439
Query: 301 AMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFS 360
MKE VDKFQG NLYIKNL DSI D+KLKELF++FGTITSCKVMRDP+G+S+GSGFVAFS
Sbjct: 440 NMKEAVDKFQGANLYIKNLDDSIGDDKLKELFAQFGTITSCKVMRDPNGLSRGSGFVAFS 499
Query: 361 TPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMY 420
+PEEASRALAEMN KM+VSKPLYVA+AQRKE+RRARLQAQFSQMRPV M PSV PR+PMY
Sbjct: 500 SPEEASRALAEMNSKMVVSKPLYVALAQRKEDRRARLQAQFSQMRPVPMPPSVVPRLPMY 559
Query: 421 PPGPSGLGQQFLYG-----------------QAPPAIIP--PQMP--------------- 446
PP GLGQQ YG Q P + P P MP
Sbjct: 560 PPSGPGLGQQMFYGQAPPAIIPPQPGFGYQQQLVPGMRPAGPPMPNFFVPIVQQGQQGQR 619
Query: 447 --------------------------PRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMG 480
PRG +RYP GR + D +P+P
Sbjct: 620 PGGRRAGAVPMQQTQQQVPLMQQQMLPRGRVFRYPPGRGLSD----------VPMP---- 665
Query: 481 AGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLE 540
++ Q +P+ AL+TALANA P +QRT+LGE+LYPLVEQLE + AAKVTGMLLE
Sbjct: 666 --------AISQSIPVGALATALANAPPAEQRTMLGENLYPLVEQLEPEMAAKVTGMLLE 717
Query: 541 MDQTEVLHLLESPEALKAKVAEAMEVLRSV 570
MDQTEVLHLLESP+ALKAKVAEAMEVLR+V
Sbjct: 718 MDQTEVLHLLESPDALKAKVAEAMEVLRNV 747
Score = 254 bits (649), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 164/454 (36%), Positives = 237/454 (52%), Gaps = 69/454 (15%)
Query: 2 AQIQVQHQAQMSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRV 61
AQ+QVQ Q AAGA GNQF+TTSLYVGDL+ NV DSQLYDLFSQ+G V+SVRV
Sbjct: 3 AQVQVQPQGPGPA-PNGAAGAGGNQFVTTSLYVGDLELNVNDSQLYDLFSQMGAVVSVRV 61
Query: 62 CRDLSTRRSLGYGYVNYANPADAA------RALDVLNFTPLNNKSIRIM---YSHR---- 108
CRDLSTRRSLGYGYVNY+NP D V P N ++ Y H+
Sbjct: 62 CRDLSTRRSLGYGYVNYSNPQDEKEKETIYEGFCVFCLIPSNYAIFFVLGFSYIHKKRRG 121
Query: 109 ------------------------------------DPSIRKS--GTGNIFIKNLDKSID 130
+P+I S + ++++ +LD ++
Sbjct: 122 KERGGELQKRELNFLRVGGEMAEVQDHEGLLSGTNDEPNIGPSRFASASLYVGDLDLNVT 181
Query: 131 HKALHDTFSSFGNILSCKIATDGSG-QSKGFGFVQFENKESAQNAIDKLNGMLINDKQVF 189
LHD FS ++S ++ D + +S G+G+V + + E A A+D LN +N K +
Sbjct: 182 DSQLHDLFSQLAQVVSIRVCRDSTTHRSLGYGYVNYTDLEDAARALDVLNFTPLNGKPIR 241
Query: 190 VGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSK 249
+ + R+ K+ N+F+KNLD+ + L F +G I S V D G SK
Sbjct: 242 IMY----SHRDPSIRKSGTGNIFIKNLDKGIDHKALHDTFSAFGNILSCKVATDASGMSK 297
Query: 250 CFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKF 309
GFV F++ + A KA++ LNG +D++ +VG +K ERE T++K
Sbjct: 298 GHGFVQFDSEEAAQKAIDKLNGMLLNDKQVFVGPFVRKQERE------------STINKE 345
Query: 310 QGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRAL 369
+ N+++KN+ + + +E L +F EFG ITS VMRD G SK GFV F ++A+ ++
Sbjct: 346 KFNNVFVKNISEGMTEEDLTRIFGEFGPITSVVVMRDGDGKSKCFGFVNFENVDDAAMSV 405
Query: 370 AEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQ 403
+NG+ K YV AQ+K ER L+++F Q
Sbjct: 406 EALNGQKFDDKEWYVGKAQKKSEREIELKSRFEQ 439
>gi|414588970|tpg|DAA39541.1| TPA: hypothetical protein ZEAMMB73_983793 [Zea mays]
Length = 654
Score = 791 bits (2044), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/625 (64%), Positives = 485/625 (77%), Gaps = 61/625 (9%)
Query: 27 FLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAAR 86
F TSLYVGDL +V D+QL+D+FSQVG V+SVRVCRD+++R+SLGY YVNY N DAAR
Sbjct: 32 FPATSLYVGDLHESVQDAQLFDVFSQVGGVVSVRVCRDINSRKSLGYAYVNYNNQGDAAR 91
Query: 87 ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
AL++LNFTP+N K IRIMYS+RDPS RKSGTGNIFIKNLDKSID+KAL+DTF +FGNILS
Sbjct: 92 ALELLNFTPINGKPIRIMYSNRDPSSRKSGTGNIFIKNLDKSIDNKALYDTFCAFGNILS 151
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKT 206
CKIATD SG+S+G+GFVQFE ESAQ+AIDKLNGMLINDK+VFVG F+RKQ+RE V+
Sbjct: 152 CKIATDPSGESRGYGFVQFEKDESAQSAIDKLNGMLINDKKVFVGPFVRKQDRENVSSNI 211
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
KF+NV+VKNL ++ TD++LK++FG+YGTITSAVVMRD DGKS+CFGFVNFENAD AA+AV
Sbjct: 212 KFSNVYVKNLSDTVTDDELKEMFGKYGTITSAVVMRDSDGKSRCFGFVNFENADAAAQAV 271
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
+ LNGK F+D+E YVG+AQKKSERE ELK +FE+ ++E +KFQ NLY+KNL ++IDDE
Sbjct: 272 QELNGKIFNDKELYVGRAQKKSEREMELKEKFEKNVQEVAEKFQNTNLYLKNLEENIDDE 331
Query: 327 KLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 386
KL+ELF+E+G ITSCKVMRD +G+S+GSGFVAF + E+A+RAL EMNGKM+ SKPLYVA+
Sbjct: 332 KLRELFAEYGNITSCKVMRDSNGVSRGSGFVAFKSAEDANRALTEMNGKMVGSKPLYVAL 391
Query: 387 AQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPPQ-- 444
AQRKE+R+A+LQAQFSQMRPVAM PSV PRMPM+PPG G+GQQ YGQ PPA I PQ
Sbjct: 392 AQRKEDRKAKLQAQFSQMRPVAMAPSVGPRMPMFPPGVPGVGQQLFYGQPPPAFINPQAG 451
Query: 445 -------MP----------------------------------------------PR-GH 450
MP PR G
Sbjct: 452 FAFQQPLMPGMRPGGPMPNFMMPMVQQGQQPQRPAGRRAGGMQQPMPMGGQQQVFPRGGR 511
Query: 451 AYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALSTALANASPEQ 510
YRYP GR M D P G+++P +MG G+P R+A+ QP+PI AL+TALANA P+Q
Sbjct: 512 GYRYPTGRGMPD-PGMHSVGAVMPPSYEMG-GMPMREAAP-QPVPIGALATALANAPPDQ 568
Query: 511 QRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSV 570
QR +LGE+LYPLVEQLER+ AAKVTGMLLEMDQTEVLHLLESP+ALKAKVAEAMEVLRS
Sbjct: 569 QRLMLGENLYPLVEQLEREQAAKVTGMLLEMDQTEVLHLLESPDALKAKVAEAMEVLRSA 628
Query: 571 AQQQANNPA--DQLASLSLNENLVS 593
Q +N + QLA+LSLN+ +VS
Sbjct: 629 QHLQQSNVSTEQQLANLSLNDGVVS 653
>gi|18402769|ref|NP_564554.1| poly(A) binding protein 8 [Arabidopsis thaliana]
gi|334183191|ref|NP_001185184.1| poly(A) binding protein 8 [Arabidopsis thaliana]
gi|10120431|gb|AAG13056.1|AC011807_15 Putative Poly-A Binding Protein [Arabidopsis thaliana]
gi|13877633|gb|AAK43894.1|AF370517_1 Putative Poly-A Binding Protein [Arabidopsis thaliana]
gi|17978685|gb|AAL47336.1| putative Poly-A Binding Protein [Arabidopsis thaliana]
gi|332194351|gb|AEE32472.1| poly(A) binding protein 8 [Arabidopsis thaliana]
gi|332194352|gb|AEE32473.1| poly(A) binding protein 8 [Arabidopsis thaliana]
Length = 671
Score = 786 bits (2030), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/630 (63%), Positives = 472/630 (74%), Gaps = 69/630 (10%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
TTSLYVGDLD VTDSQL++ F+Q GQV+SVRVCRD++TRRSLGYGYVNYA P DA+RAL
Sbjct: 44 TTSLYVGDLDATVTDSQLFEAFTQAGQVVSVRVCRDMTTRRSLGYGYVNYATPQDASRAL 103
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LNF LN ++IR+MYS RDPS+RKSG GNIFIKNLDKSIDHKALH+TFS+FG ILSCK
Sbjct: 104 NELNFMALNGRAIRVMYSVRDPSLRKSGVGNIFIKNLDKSIDHKALHETFSAFGPILSCK 163
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKF 208
+A D SGQSKG+GFVQ++ E+AQ AIDKLNGML+NDKQV+VG F+ K +R+ K KF
Sbjct: 164 VAVDPSGQSKGYGFVQYDTDEAAQGAIDKLNGMLLNDKQVYVGPFVHKLQRDPSGEKVKF 223
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NV+VKNL ES +DE+L K+FGE+G TS V+MRDG+GKSK FGFVNFEN+DDAA+AV+A
Sbjct: 224 TNVYVKNLSESLSDEELNKVFGEFGVTTSCVIMRDGEGKSKGFGFVNFENSDDAARAVDA 283
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
LNGK FDD+EW+VGKAQKKSERE ELK +FEQ++KE DK QG NLY+KNL +S+ D+KL
Sbjct: 284 LNGKTFDDKEWFVGKAQKKSERETELKQKFEQSLKEAADKSQGSNLYVKNLDESVTDDKL 343
Query: 329 KELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
+E F+ FGTITSCKVMRDPSG+S+GSGFVAFSTPEEA+RA+ EMNGKMIV+KPLYVA+AQ
Sbjct: 344 REHFAPFGTITSCKVMRDPSGVSRGSGFVAFSTPEEATRAITEMNGKMIVTKPLYVALAQ 403
Query: 389 RKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPP-------------GPS--------GL 427
RKE+R+ARLQAQFSQMRPV M P+V PRM MYPP GP G
Sbjct: 404 RKEDRKARLQAQFSQMRPVNMPPAVGPRMQMYPPGGPPMGQQLFYGQGPPAMIPQPGFGY 463
Query: 428 GQQFLYGQAP-----PAIIPPQMP------------------------------------ 446
QQ + G P P P M
Sbjct: 464 QQQLVPGMRPGGSPMPNFFMPMMQQGQQQQQQQQQQQRPGGGRRGALPQPQQPSPMMQQQ 523
Query: 447 --PRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDM--GAGIPRRDASVGQPMPITALSTA 502
PRG YRYP R++ P +ML VP D+ G G+ RD+ QP+PI AL+T
Sbjct: 524 MHPRGRMYRYPQ-RDVNTMPGP--TQNMLSVPYDVSSGGGVHHRDSPTSQPVPIVALATR 580
Query: 503 LANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAE 562
LANA+PEQQRT+LGE+LYPLVEQLE ++AAKVTGMLLEMDQTEVLHLLESPEALKAKV E
Sbjct: 581 LANAAPEQQRTMLGENLYPLVEQLEPESAAKVTGMLLEMDQTEVLHLLESPEALKAKVTE 640
Query: 563 AMEVLRSVAQQQANNPADQLASLSLNENLV 592
AM+VLRSVAQQQA ADQLASLSL +N+V
Sbjct: 641 AMDVLRSVAQQQAGGAADQLASLSLGDNIV 670
>gi|297832034|ref|XP_002883899.1| hypothetical protein ARALYDRAFT_899764 [Arabidopsis lyrata subsp.
lyrata]
gi|297329739|gb|EFH60158.1| hypothetical protein ARALYDRAFT_899764 [Arabidopsis lyrata subsp.
lyrata]
Length = 655
Score = 785 bits (2026), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/639 (65%), Positives = 494/639 (77%), Gaps = 62/639 (9%)
Query: 10 AQMSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRR 69
A ++GP AA QF TTSLYVGDLD NVTDSQL+D FSQ+GQV+SVRVCRDL+TRR
Sbjct: 24 AMVTGPGAAAAA----QFGTTSLYVGDLDPNVTDSQLFDAFSQMGQVVSVRVCRDLATRR 79
Query: 70 SLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSI 129
SLGYGYVN+ +P DAARA+ LN+ PLN K +R+MYSHRDPS+R+SG GNIFIKNLDKSI
Sbjct: 80 SLGYGYVNFTSPQDAARAIQELNYIPLNGKPVRVMYSHRDPSVRRSGAGNIFIKNLDKSI 139
Query: 130 DHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVF 189
DHKALHDTFS FGNI+SCK+A D SGQSKG+GFVQ+E +ESAQ A+ +LNGML+NDKQV+
Sbjct: 140 DHKALHDTFSVFGNIISCKVAVDSSGQSKGYGFVQYETEESAQKAMGQLNGMLLNDKQVY 199
Query: 190 VGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSK 249
VG FLR+QER++ KT F NV+VKNL ESTTD+DLK IFGE+G ITSAVVM+DG+GK K
Sbjct: 200 VGPFLRRQERDSTGNKTIFTNVYVKNLAESTTDDDLKNIFGEFGKITSAVVMKDGEGKPK 259
Query: 250 CFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKF 309
FGFVNFENADDAAKAVE+LNGK FDD+EW+VG+AQKKSERE ELK Q+EQ++KE DKF
Sbjct: 260 GFGFVNFENADDAAKAVESLNGKTFDDKEWFVGRAQKKSEREMELKVQYEQSLKEAADKF 319
Query: 310 QGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRAL 369
Q NLY+KNL DS+ DEKLKELF+ +GT+TSCKVMRDP+G+S+GSGFVAFSTPEEA++A+
Sbjct: 320 QSSNLYVKNLDDSVSDEKLKELFTPYGTVTSCKVMRDPNGMSRGSGFVAFSTPEEATKAM 379
Query: 370 AEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQ 429
+EM+GKMI +KPLYVAVAQRKE+RRARLQAQFSQMRPVAM P V PRMP+YPPG G+GQ
Sbjct: 380 SEMSGKMIENKPLYVAVAQRKEDRRARLQAQFSQMRPVAMPPPVGPRMPIYPPGGPGIGQ 439
Query: 430 QFLYGQAPPAIIP------------PQMPPRG---HAYRYPLGRNMQDFP---------- 464
YGQAPP +I P M P G H + P+ + Q P
Sbjct: 440 PMFYGQAPPTMISSQPGFGYQQQLVPGMRPGGAPMHNFFMPMVQQGQQRPGGRHPGGIQQ 499
Query: 465 ------------------------FDMGAGSMLP------VPVDMGAGIPRRDASVGQPM 494
+ G GS P +P +MG+ +P RD + Q +
Sbjct: 500 SQQQQQVPMMQQQHQMHPRGRMFRYPQGRGSGGPPDVPGMLPYEMGSNMPLRDPVLSQHV 559
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
PI AL+++LANA+PE QRTLLGE+LYPLVEQLE ++AAKVTGMLLEMDQTEVLHLLESPE
Sbjct: 560 PIGALASSLANAAPELQRTLLGENLYPLVEQLEAESAAKVTGMLLEMDQTEVLHLLESPE 619
Query: 555 ALKAKVAEAMEVLRSVAQQQANNPADQLASLSLNENLVS 593
ALKAKVAEAM+VLRSVA A A+QLASL+LN+NLVS
Sbjct: 620 ALKAKVAEAMDVLRSVA---AGGSAEQLASLNLNDNLVS 655
>gi|357154719|ref|XP_003576878.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 653
Score = 783 bits (2021), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/625 (63%), Positives = 476/625 (76%), Gaps = 64/625 (10%)
Query: 27 FLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAAR 86
F TSLYVGDLD +V D+QL+D+F+Q+G V+SVRVCRD++TR+SLGY YVNY PADAAR
Sbjct: 31 FPATSLYVGDLDMSVQDAQLFDVFAQIGGVVSVRVCRDVTTRKSLGYAYVNYNTPADAAR 90
Query: 87 ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
AL++LNFTP+N + IRIMYS+RDPS+RKSGT NIFIKNLDKSID+KAL+DTF FGNILS
Sbjct: 91 ALEMLNFTPINGRPIRIMYSNRDPSLRKSGTANIFIKNLDKSIDNKALYDTFCVFGNILS 150
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKT 206
CK+ATD SG+SKG+GFVQ+E E+A AI+KLNGML+NDK+V+VG F+RKQER+
Sbjct: 151 CKVATDASGESKGYGFVQYERDEAAHAAIEKLNGMLMNDKKVYVGPFIRKQERDNSPGNV 210
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
KFNNVFVKNL E+TT++DL++IFG++GTITS VVMR+GDG+SKCFGFVNFE+ D+AA AV
Sbjct: 211 KFNNVFVKNLSETTTEDDLREIFGKFGTITSVVVMREGDGRSKCFGFVNFESPDEAALAV 270
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
+ LNGKKFDD+EWYVG+AQKKSERE ELK +FE+ ++ET DK+Q NLY+KNL D++DDE
Sbjct: 271 QDLNGKKFDDKEWYVGRAQKKSEREMELKEKFEKNLQETADKYQNTNLYLKNLDDTVDDE 330
Query: 327 KLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 386
KL+ELF+EFG ITSCKVMRD +G S+GSGFVAF + E+ASRALAEMN KM+ SKPLYVA+
Sbjct: 331 KLRELFAEFGAITSCKVMRDSNGASRGSGFVAFKSAEDASRALAEMNNKMVGSKPLYVAL 390
Query: 387 AQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPPQMP 446
AQRKE+R+ARLQAQFSQ+RPV M P+V PRM M+PPG G+GQQ YGQ PPA I PQ
Sbjct: 391 AQRKEDRKARLQAQFSQLRPVPMAPTVGPRMAMFPPGVPGVGQQLFYGQPPPAFINPQ-- 448
Query: 447 PRGHAYRYPL------GRNMQDFPFDM---------------GAGSM------------- 472
G ++ PL G M +F M G G M
Sbjct: 449 -PGFGFQQPLMPGMRPGAPMPNFMMPMVQQGQQPQRPSGRRAGTGGMQQSMPMGQQQMIA 507
Query: 473 -------------------------LPVPVDMGAGIPRRDASVGQPMPITALSTALANAS 507
+P P ++G G+P RDA QP+PI AL+TALANA
Sbjct: 508 RGGRGYRYPTGRGMPDPAMHGVGGGMPSPYEIG-GMPMRDAGASQPVPIGALATALANAP 566
Query: 508 PEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVL 567
P+QQR +LGE+LYPLV+QLE D AAKVTGMLLEMDQTEVLHLLESP+ALKAKVAEAMEVL
Sbjct: 567 PDQQRMMLGENLYPLVDQLEHDQAAKVTGMLLEMDQTEVLHLLESPDALKAKVAEAMEVL 626
Query: 568 RSVAQQQANNPADQLASLSLNENLV 592
RS AQ +P QLASLSLN++ V
Sbjct: 627 RS-AQHTNPSPEQQLASLSLNDHGV 650
>gi|242076392|ref|XP_002448132.1| hypothetical protein SORBIDRAFT_06g021850 [Sorghum bicolor]
gi|241939315|gb|EES12460.1| hypothetical protein SORBIDRAFT_06g021850 [Sorghum bicolor]
Length = 664
Score = 781 bits (2018), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/624 (64%), Positives = 471/624 (75%), Gaps = 63/624 (10%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
TTSLYVGDL+ +V+DSQLY+LFSQ GQV+SVRVCRD+++RRSLGY YVN++NP DAARAL
Sbjct: 45 TTSLYVGDLEGSVSDSQLYELFSQAGQVVSVRVCRDVTSRRSLGYAYVNFSNPLDAARAL 104
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+VLNF LNNK IR+MYS+RDPS R+SG+ NIFIKNLDK+ID+K LH+TFSSFG ILSCK
Sbjct: 105 EVLNFAVLNNKPIRVMYSNRDPSSRRSGSANIFIKNLDKTIDNKTLHETFSSFGTILSCK 164
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKF 208
+A D +GQSKGFGFVQ+E +E+AQNAI LNGMLINDK VFVG FLRKQER+ KTKF
Sbjct: 165 VAMDEAGQSKGFGFVQYEKEEAAQNAIKSLNGMLINDKPVFVGPFLRKQERDHSFDKTKF 224
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NNVFVKNL ESTT EDL K+FGEYG+ITSAVVM DGKS+CFGF+NFEN D A++AV+
Sbjct: 225 NNVFVKNLSESTTKEDLLKVFGEYGSITSAVVMIGMDGKSRCFGFINFENPDAASRAVQE 284
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
LNGKK +D+EWYVG+AQKKSERE ELK +FEQ++K+ DK+QGLNLY+KNL DSI D++L
Sbjct: 285 LNGKKINDKEWYVGRAQKKSEREMELKRRFEQSLKDAADKYQGLNLYLKNLDDSIGDDQL 344
Query: 329 KELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
+ELFS FG ITS KVMRD +G+SKGSGFVAFST EEAS+AL EMNGKMI KPLYVA AQ
Sbjct: 345 RELFSNFGKITSYKVMRDQNGLSKGSGFVAFSTREEASQALTEMNGKMISGKPLYVAFAQ 404
Query: 389 RKEERRARLQAQFSQMRP-VAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAIIP----- 442
RKE+R+A LQAQFSQMRP V M P++ PR+PMYPP QQ YGQAPPA+IP
Sbjct: 405 RKEDRKAMLQAQFSQMRPAVPMTPTLAPRLPMYPPMAP---QQLFYGQAPPAMIPPQPGF 461
Query: 443 --------------PQMP--------------------------------------PRGH 450
P MP PRG
Sbjct: 462 GFQQQLVPGMRPGGPHMPNYFVPVVQQGQQGPRPGMRRGAGAQGQQPVPPFQQQIVPRGR 521
Query: 451 AYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALSTALANASPEQ 510
YRYP GRNM + P G + DMG G P RDA+V I L++ALANA+PEQ
Sbjct: 522 MYRYPTGRNMPEAPAMPGVAGGMIQAYDMG-GFPVRDAAVSPAAQIGTLTSALANANPEQ 580
Query: 511 QRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSV 570
QRT+LGE+LYPLVEQLE + AAKVTGMLLEMDQTEVLHLLESP+ALK+KVAEAM+VLR+V
Sbjct: 581 QRTILGENLYPLVEQLEPNQAAKVTGMLLEMDQTEVLHLLESPDALKSKVAEAMDVLRNV 640
Query: 571 AQQQ-ANNPADQLASLSLNENLVS 593
A QQ N P +QLA+LSL E ++S
Sbjct: 641 AHQQNPNTPTNQLAALSLTEGIIS 664
>gi|115459296|ref|NP_001053248.1| Os04g0504800 [Oryza sativa Japonica Group]
gi|32490269|emb|CAE05558.1| OSJNBb0116K07.11 [Oryza sativa Japonica Group]
gi|113564819|dbj|BAF15162.1| Os04g0504800 [Oryza sativa Japonica Group]
gi|215695125|dbj|BAG90316.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 659
Score = 779 bits (2012), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/623 (65%), Positives = 469/623 (75%), Gaps = 63/623 (10%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL+ +VTDSQLY+LFSQ GQV+SVRVCRD+S+RRSLGY YVN+ NP DAARAL++
Sbjct: 40 SLYVGDLEASVTDSQLYELFSQAGQVMSVRVCRDISSRRSLGYAYVNFNNPVDAARALEL 99
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
LNF PLN K IR+MYS+RDPS R+SG+ NIFIKNLDK+IDHK LHDTFS+FGNILSCK+A
Sbjct: 100 LNFAPLNGKPIRVMYSNRDPSSRRSGSANIFIKNLDKAIDHKTLHDTFSAFGNILSCKVA 159
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNN 210
TD GQSKGFGFVQ++ E+AQ+AI LNGMLINDK V+VG FLRKQERE KTKFNN
Sbjct: 160 TDEMGQSKGFGFVQYDKGEAAQSAIKSLNGMLINDKPVYVGPFLRKQERENSVDKTKFNN 219
Query: 211 VFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALN 270
VFVKNL ESTT EDL KIFG YG ITSAV+M DGKS+CFGF+NF++ DDAA+AVE LN
Sbjct: 220 VFVKNLSESTTKEDLVKIFGAYGNITSAVIMVGMDGKSRCFGFINFKSPDDAARAVEELN 279
Query: 271 GKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKE 330
GKK +D+EWYVG+AQKKSERE ELK +FEQ+MK+ DK+QGLNLY+KNL DSI D++L E
Sbjct: 280 GKKINDKEWYVGRAQKKSEREIELKRRFEQSMKDAADKYQGLNLYMKNLDDSIGDDQLCE 339
Query: 331 LFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRK 390
LFS +G ITSCK+MRD +G+SKGSGFVAFST EEAS+AL EMNGKMI KPLYVA AQRK
Sbjct: 340 LFSNYGKITSCKIMRDANGVSKGSGFVAFSTREEASQALTEMNGKMISGKPLYVAFAQRK 399
Query: 391 EERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPPQ------ 444
E+R+A LQAQFSQ+RPV M PS+ PR+PMYPP + LGQQ YGQAPPAI+PPQ
Sbjct: 400 EDRKAMLQAQFSQVRPVPMTPSMAPRLPMYPPM-APLGQQLFYGQAPPAIMPPQPGFGFQ 458
Query: 445 ------MPPRG-HAYRY--------------------------------------PLGR- 458
M P G H Y P GR
Sbjct: 459 QQLVPGMRPGGAHMPNYFVPVVQQGQQGPRPGIRRSGAGSAQGQQSAQPFQQQMLPRGRV 518
Query: 459 -------NMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALSTALANASPEQQ 511
NM D P G + DMG G P RDA + P PI L++ALANA+PEQQ
Sbjct: 519 YRYPPAHNMPDVPPMPGVAGGMIQSYDMG-GFPVRDAGL-SPAPIGTLTSALANANPEQQ 576
Query: 512 RTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVA 571
RT+LGESLYPLVE LE++ AAKVTGMLLEMDQTEVLHLLESPEALK+KVAEAM+VLR+VA
Sbjct: 577 RTILGESLYPLVELLEQNHAAKVTGMLLEMDQTEVLHLLESPEALKSKVAEAMDVLRNVA 636
Query: 572 QQQ-ANNPADQLASLSLNENLVS 593
QQ AN P QLA+LSL + ++S
Sbjct: 637 QQHNANTPTSQLAALSLGDAIIS 659
>gi|218195166|gb|EEC77593.1| hypothetical protein OsI_16552 [Oryza sativa Indica Group]
Length = 659
Score = 778 bits (2009), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/623 (64%), Positives = 468/623 (75%), Gaps = 63/623 (10%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL+ +VTDSQLY+LFSQ GQV+SVRVCRD+S+RRSLGY YVN+ NP DAARAL++
Sbjct: 40 SLYVGDLEASVTDSQLYELFSQAGQVMSVRVCRDISSRRSLGYAYVNFNNPVDAARALEL 99
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
LNF PLN K IR+MYS+RDPS R+SG+ NIFIKNLDK+IDHK LHDTFS+FGNILSCK+A
Sbjct: 100 LNFAPLNGKPIRVMYSNRDPSSRRSGSANIFIKNLDKAIDHKTLHDTFSAFGNILSCKVA 159
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNN 210
TD GQSKGFGFVQ++ E+AQ+AI LNGMLINDK V+VG FLRKQERE KTKFNN
Sbjct: 160 TDEMGQSKGFGFVQYDKGEAAQSAIKSLNGMLINDKPVYVGPFLRKQERENSVDKTKFNN 219
Query: 211 VFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALN 270
VFVKNL ESTT EDL KIFG YG ITSAV+M DGKS+CFGF+NF++ DDAA+AVE LN
Sbjct: 220 VFVKNLSESTTKEDLVKIFGAYGNITSAVIMVGMDGKSRCFGFINFKSPDDAARAVEELN 279
Query: 271 GKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKE 330
GKK +D+EWYVG+AQKKSERE ELK +FEQ+MK+ DK+QGLNLY+KNL DSI D++L E
Sbjct: 280 GKKINDKEWYVGRAQKKSEREIELKRRFEQSMKDAADKYQGLNLYMKNLDDSIGDDQLCE 339
Query: 331 LFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRK 390
LFS +G ITSCK+MRD +G+SKGSGFVAFST EEAS+AL EMNGKMI KPLYVA AQRK
Sbjct: 340 LFSNYGKITSCKIMRDANGVSKGSGFVAFSTREEASQALTEMNGKMISGKPLYVAFAQRK 399
Query: 391 EERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPPQ------ 444
E+R+ LQAQFSQ+RPV M PS+ PR+PMYPP + LGQQ YGQAPPAI+PPQ
Sbjct: 400 EDRKVMLQAQFSQVRPVPMTPSMAPRLPMYPPM-APLGQQLFYGQAPPAIMPPQPGFGFQ 458
Query: 445 ------MPPRG-HAYRY--------------------------------------PLGR- 458
M P G H Y P GR
Sbjct: 459 QQLVPGMRPGGAHMPNYFVPVVQQGQQGPRPGIRRSGAGSAQGQQSAQPFQQQMLPRGRV 518
Query: 459 -------NMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALSTALANASPEQQ 511
NM D P G + DMG G P RDA + P PI L++ALANA+PEQQ
Sbjct: 519 YRYPPAHNMPDVPPMPGVAGGMIQSYDMG-GFPVRDAGL-SPAPIGTLTSALANANPEQQ 576
Query: 512 RTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVA 571
RT+LGESLYPLVE LE++ AAKVTGMLLEMDQTEVLHLLESPEALK+KVAEAM+VLR+VA
Sbjct: 577 RTILGESLYPLVELLEQNHAAKVTGMLLEMDQTEVLHLLESPEALKSKVAEAMDVLRNVA 636
Query: 572 QQQ-ANNPADQLASLSLNENLVS 593
QQ AN P QLA+LSL + ++S
Sbjct: 637 QQHNANTPTSQLAALSLGDAIIS 659
>gi|297847300|ref|XP_002891531.1| PAB8 binding protein 8 [Arabidopsis lyrata subsp. lyrata]
gi|297337373|gb|EFH67790.1| PAB8 binding protein 8 [Arabidopsis lyrata subsp. lyrata]
Length = 669
Score = 778 bits (2009), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/634 (63%), Positives = 470/634 (74%), Gaps = 73/634 (11%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
TTSLYVGDLD VTDSQL++ FSQ GQV+SVRVCRD++TRRSLGYGYVNYA P DA+RAL
Sbjct: 38 TTSLYVGDLDATVTDSQLFEAFSQAGQVVSVRVCRDMTTRRSLGYGYVNYATPQDASRAL 97
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LNF LN ++IR+MYS RDPS+RKSG GNIFIKNLDKSIDHKALH+TFS+FG ILSCK
Sbjct: 98 NELNFMALNGRAIRVMYSVRDPSLRKSGVGNIFIKNLDKSIDHKALHETFSAFGPILSCK 157
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKF 208
+A D SGQSKG+GFVQ++ E+AQ AIDKLNGML+NDKQV+VG F+ K +R+ K KF
Sbjct: 158 VAVDPSGQSKGYGFVQYDTDEAAQRAIDKLNGMLLNDKQVYVGPFVHKLQRDPSGEKVKF 217
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NV+VKNL ES +DE+L K+FGE+G TS V+MRDG+GKSK FGFVNFEN+DDAA+AV+A
Sbjct: 218 TNVYVKNLSESLSDEELNKVFGEFGVTTSCVIMRDGEGKSKGFGFVNFENSDDAARAVDA 277
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
LNGK FDD+EW+VGKAQKKSERE ELK +FEQ++KE DK QG NLY+KNL +S+ D+KL
Sbjct: 278 LNGKTFDDKEWFVGKAQKKSERETELKQKFEQSLKEAADKSQGSNLYVKNLDESVTDDKL 337
Query: 329 KELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
+E F+ FGTITSCKVMRDP+G+S+GSGFVAFSTPEEASRA+ EMNGKMIV+KPLYVA+AQ
Sbjct: 338 REHFAPFGTITSCKVMRDPTGVSRGSGFVAFSTPEEASRAITEMNGKMIVTKPLYVALAQ 397
Query: 389 RKEERRARLQAQFSQMRPVAMGPSVPPRMPMY---------------------PPGPS-G 426
RKE+R+ARLQAQFSQMRPV M P+V PRM MY PP P G
Sbjct: 398 RKEDRKARLQAQFSQMRPVNMPPAVGPRMQMYPPGGPPMGQQLFYGQGPPAMIPPQPGFG 457
Query: 427 LGQQFLYGQAP-----PAIIPPQMP----------------------------------- 446
QQ + G P P P M
Sbjct: 458 YQQQLVPGMRPGGSPMPNFFMPMMQQGQQQQQQQQQQQQQRPGGGRRGGALPQPQQPSPM 517
Query: 447 ------PRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDM--GAGIPRRDASVGQPMPITA 498
PRG YRYP R++ P +ML VP D+ G G+ RD+ Q +PI A
Sbjct: 518 MQQQMHPRGRMYRYPQ-RDVNTMPGL--TPNMLSVPYDVSSGGGVHHRDSPASQSVPIGA 574
Query: 499 LSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKA 558
L+T LANA+PEQQRT+LGE+LYPLVEQLE ++AAKVTGMLLEMDQTEVLHLLESPEALKA
Sbjct: 575 LATQLANAAPEQQRTMLGENLYPLVEQLEPESAAKVTGMLLEMDQTEVLHLLESPEALKA 634
Query: 559 KVAEAMEVLRSVAQQQANNPADQLASLSLNENLV 592
KV EAM+VLRSVAQQQA ADQLASLSL +N+V
Sbjct: 635 KVTEAMDVLRSVAQQQAGGAADQLASLSLGDNIV 668
>gi|326503608|dbj|BAJ86310.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 778 bits (2008), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/640 (63%), Positives = 476/640 (74%), Gaps = 69/640 (10%)
Query: 19 AAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNY 78
A GA+ TTSLYVGDL+ NVTDSQLY+LFSQ GQV+SVRVCRD+++RRSLGY YVNY
Sbjct: 111 AGGAAQQPLPTTSLYVGDLEANVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNY 170
Query: 79 ANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTF 138
+NP DAARA++ LNF PLNNK IR+MYS+RDPS R+SG+ NIFIKNLDK+ID+K LHDTF
Sbjct: 171 SNPMDAARAMEALNFAPLNNKPIRVMYSNRDPSSRRSGSANIFIKNLDKTIDNKTLHDTF 230
Query: 139 SSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQE 198
S+FG ILSCK+A D GQSKGFGFVQ+E +ESAQ+A+ LNGMLINDK V+VG FLRKQE
Sbjct: 231 SAFGAILSCKVAMDDIGQSKGFGFVQYEKEESAQSAMKSLNGMLINDKPVYVGPFLRKQE 290
Query: 199 RETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFEN 258
R+ + K KFNNVFVKNL ESTT EDL K+F EYGTITSAVVM DGKS+CFGFVNFE+
Sbjct: 291 RDNSSDKAKFNNVFVKNLSESTTKEDLIKVFSEYGTITSAVVMIGMDGKSRCFGFVNFES 350
Query: 259 ADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKN 318
DDAA+AVE LNGKK +D+EWYVG+AQKKSERE +LK +FEQ+MK+ DK+QG NLY+KN
Sbjct: 351 PDDAARAVEELNGKKINDKEWYVGRAQKKSEREMDLKRRFEQSMKDAADKYQGQNLYLKN 410
Query: 319 LGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIV 378
L D I D++L+ELFS FG ITSCK+MRD +G+SKGSGFV+FST EEAS+AL EMNGKMI
Sbjct: 411 LDDGITDDQLRELFSNFGKITSCKIMRDQNGVSKGSGFVSFSTREEASQALTEMNGKMIS 470
Query: 379 SKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAP- 437
KPLYVA AQRKEER+A LQAQFSQMRPV M PS+ PR+PMYPP P+ LGQQ YGQAP
Sbjct: 471 GKPLYVAFAQRKEERKAMLQAQFSQMRPVPMTPSMTPRLPMYPPMPT-LGQQLFYGQAPP 529
Query: 438 --------------------------------PAIIPPQMPPR----------------- 448
P + P Q PR
Sbjct: 530 AMMPPQPGYGFQQQLVPGMRPGGGAHMPNYFVPVVQPGQQGPRPGMRRSGPGSAQGQQTP 589
Query: 449 ----------GHAYRYPLG-RNM---QDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPM 494
G YRYP G R+M Q P +G G M+ P DMG+ P RDA V
Sbjct: 590 QPFQQQMVPRGRVYRYPPGPRHMAEVQQMP-GVGVGGMV-QPYDMGS-FPVRDAGVSPAP 646
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
PI L++ALANA+PEQQRT+LGESLYPLVE+LE AAKVTGMLLEMDQTEVLHLLESPE
Sbjct: 647 PIGTLTSALANATPEQQRTILGESLYPLVEKLEHQQAAKVTGMLLEMDQTEVLHLLESPE 706
Query: 555 ALKAKVAEAMEVLRSVAQQQ-ANNPADQLASLSLNENLVS 593
ALK+KVAEAM+VLR+VAQQQ N P QLA LSL++ ++S
Sbjct: 707 ALKSKVAEAMDVLRNVAQQQNPNAPTSQLAGLSLSDGIIS 746
>gi|115477976|ref|NP_001062583.1| Os09g0115400 [Oryza sativa Japonica Group]
gi|46389987|dbj|BAD16229.1| putative poly(A)-binding protein [Oryza sativa Japonica Group]
gi|113630816|dbj|BAF24497.1| Os09g0115400 [Oryza sativa Japonica Group]
gi|125562753|gb|EAZ08133.1| hypothetical protein OsI_30396 [Oryza sativa Indica Group]
gi|125604734|gb|EAZ43770.1| hypothetical protein OsJ_28392 [Oryza sativa Japonica Group]
gi|169244485|gb|ACA50516.1| poly(A)-binding protein [Oryza sativa Japonica Group]
gi|215695451|dbj|BAG90618.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 662
Score = 776 bits (2005), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/625 (63%), Positives = 483/625 (77%), Gaps = 58/625 (9%)
Query: 27 FLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAAR 86
F TSLYVGDLD +V D+QL+D+F+QVG V+SVRVCRD++TRRSLGY YVNY++PADAAR
Sbjct: 37 FPATSLYVGDLDVSVQDAQLFDVFAQVGGVVSVRVCRDVNTRRSLGYAYVNYSSPADAAR 96
Query: 87 ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
AL++LNFTP+N K IRIMYS+RDPS+RKSGT NIFIKNLDKSID+KAL+DTF FGNILS
Sbjct: 97 ALEMLNFTPINGKPIRIMYSNRDPSLRKSGTANIFIKNLDKSIDNKALYDTFCVFGNILS 156
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKT 206
CK+ATD SG+SKG+GFVQ+E E+AQ AIDKLNGML+NDK+V+VG F+RKQER+ +
Sbjct: 157 CKVATDASGESKGYGFVQYERDEAAQAAIDKLNGMLMNDKKVYVGPFIRKQERDNSPGQV 216
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
KFNNV+VKNL E+TT++DLK+IFG++GTITSAVVMR+GDG+SKCFGFVNFE+ DDAA+AV
Sbjct: 217 KFNNVYVKNLSENTTEDDLKEIFGKFGTITSAVVMREGDGRSKCFGFVNFESPDDAAQAV 276
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
+ LNGKKFDD+EWYVG+AQKKSERE ELK +FE+ ++E DK+Q NLY+KNL DS+DD+
Sbjct: 277 QELNGKKFDDKEWYVGRAQKKSEREMELKEKFEKNLQEAADKYQNTNLYLKNLDDSVDDD 336
Query: 327 KLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 386
KL+ELF+E+GTITSCKVMRD +G+S+GSGFVAF + E+ASRALAEMN KM+ SKPLYVA+
Sbjct: 337 KLRELFAEYGTITSCKVMRDSNGVSRGSGFVAFKSAEDASRALAEMNSKMVGSKPLYVAL 396
Query: 387 AQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAII----- 441
AQRKE+R+ARLQAQFSQ+RPV + PSV PRMPM+PPG G+GQQ YGQ PPA I
Sbjct: 397 AQRKEDRKARLQAQFSQLRPVPLAPSVGPRMPMFPPGVPGVGQQLFYGQPPPAFINTQPG 456
Query: 442 ----PPQMP-----------------PRGHAYRYPLGRNM-------------------- 460
P MP +G + P GR
Sbjct: 457 FGFQQPLMPGMRPGAGPMPNFIMPMVQQGQQPQRPAGRRAGAGGMQQPMPMGQQQMMARG 516
Query: 461 -QDFPFDMGAGSMLPVPVDMGAGI----------PRRDASVGQPMPITALSTALANASPE 509
+ + + G G P +G G+ P RDA+ QP+PI AL+TALANA+P+
Sbjct: 517 GRGYRYPTGRGMPDPAMHGVGGGVMPSPYEMGGMPMRDAAASQPVPIGALATALANAAPD 576
Query: 510 QQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRS 569
QQR +LGE+LYPLV+QLE + AAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLR+
Sbjct: 577 QQRMMLGENLYPLVDQLEHEQAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRT 636
Query: 570 VAQQQAN-NPADQLASLSLNENLVS 593
Q Q N P QLASLSLN+ +VS
Sbjct: 637 AQQIQTNATPEQQLASLSLNDGVVS 661
>gi|326526505|dbj|BAJ97269.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 663
Score = 769 bits (1986), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/623 (63%), Positives = 468/623 (75%), Gaps = 63/623 (10%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDLD +V D+QL+D+FSQVG V+SVRVCRD++TR SLGY YVN+++PADAARAL++
Sbjct: 43 SLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEM 102
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
LNFTP+N K IRIMYS+RDPS RKSG NIFIKNLDKSID+KAL+DTFS+FGNILSCK+A
Sbjct: 103 LNFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVA 162
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNN 210
T+ SG+SKG+GFVQ+E ESAQNAI++LNGML+NDK+V+VG F+RKQERE V KFNN
Sbjct: 163 TEMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNN 222
Query: 211 VFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALN 270
V+VKNL ESTT+++LK++FG +G ITS +V+R DGKS+CFGFVNFEN DDA AVE LN
Sbjct: 223 VYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLN 282
Query: 271 GKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSI-DDEKLK 329
GKKFDD+E YVG+AQKKSERE +LK FE++ KET D+ QG NLY+KNL S+ DDEKLK
Sbjct: 283 GKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLK 342
Query: 330 ELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQR 389
ELF+EFGTITSCKVMRD +G++KGSGFVAF + E+A+RAL MNGKM+ SKPLYVA+AQR
Sbjct: 343 ELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQR 402
Query: 390 KEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPPQ----- 444
KEERRARLQAQFSQMRPV M P V PRMPMYPPG G+GQQ YGQ PPA + PQ
Sbjct: 403 KEERRARLQAQFSQMRPV-MPPPVAPRMPMYPPGVPGMGQQLFYGQPPPAFVNPQPGYGF 461
Query: 445 --------------MP------------------------------PRGH---------- 450
MP P GH
Sbjct: 462 QQHMIPGMRPGVAPMPNFVMPMVQQGQQPQRPSGRRAGAGGMQQPMPMGHQQMVPRGGRG 521
Query: 451 AYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALSTALANASPEQ 510
YRY GR M + F G G M P +MG P D Q + AL++ALAN+ PEQ
Sbjct: 522 GYRYASGRGMPEAAF-RGVGGMAPSLYEMGRMTP-GDTGAPQQVSSGALASALANSPPEQ 579
Query: 511 QRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSV 570
QR +LGESLYPLV+QLE D AAKVTGMLLEMDQTEVLHL+ESP+ALK+KVAEAMEVLRS
Sbjct: 580 QRLMLGESLYPLVDQLEHDQAAKVTGMLLEMDQTEVLHLIESPDALKSKVAEAMEVLRSA 639
Query: 571 AQQQANNPADQLASLSLNENLVS 593
QQQ N PADQLA+LSL++ V+
Sbjct: 640 QQQQTNVPADQLAALSLSDGFVA 662
>gi|226496737|ref|NP_001151785.1| LOC100285420 [Zea mays]
gi|195649671|gb|ACG44303.1| polyadenylate-binding protein 2 [Zea mays]
gi|414586484|tpg|DAA37055.1| TPA: polyadenylate-binding protein 2 [Zea mays]
Length = 660
Score = 767 bits (1981), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/641 (63%), Positives = 471/641 (73%), Gaps = 66/641 (10%)
Query: 15 PNGVAAGASGNQFL-TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGY 73
P V G Q L TTSLYVGDL+ +V+DSQLY+LFSQ GQV+SVRVCRD+++RRSLGY
Sbjct: 24 PGAVGVGLGVAQPLPTTSLYVGDLEGSVSDSQLYELFSQAGQVVSVRVCRDVTSRRSLGY 83
Query: 74 GYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKA 133
YVN+ NP DAARAL+VLNF PLNNK IR+MYS+RDPS R+SG+ NIFIKNLDK ID+K+
Sbjct: 84 AYVNFNNPLDAARALEVLNFAPLNNKPIRVMYSNRDPSSRRSGSANIFIKNLDKMIDNKS 143
Query: 134 LHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHF 193
LH+TFSSFG ILSCK+A D GQSKGFGFVQ+E +E+AQNAI LNGMLINDK VFVG F
Sbjct: 144 LHETFSSFGTILSCKVAMDEGGQSKGFGFVQYEKEEAAQNAIKSLNGMLINDKPVFVGPF 203
Query: 194 LRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGF 253
LRKQER+ KTKFNNVFVKNL ESTT EDL KIFGEYG ITSAVVM DGKS+CFGF
Sbjct: 204 LRKQERDHSFDKTKFNNVFVKNLSESTTKEDLLKIFGEYGNITSAVVMIGMDGKSRCFGF 263
Query: 254 VNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLN 313
+NFEN D A++AV+ LNGKK +D+EWYVG+AQKKSERE ELK +FEQ +K+ DK+QGLN
Sbjct: 264 INFENPDAASRAVQELNGKKINDKEWYVGRAQKKSEREMELKRRFEQILKDAADKYQGLN 323
Query: 314 LYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMN 373
LY+KNL DSI D++L+ELFS FG ITSCKVMRD +G+SKGSGFVAFST EEAS+AL EMN
Sbjct: 324 LYLKNLDDSIGDDQLRELFSNFGKITSCKVMRDQNGLSKGSGFVAFSTREEASQALTEMN 383
Query: 374 GKMIVSKPLYVAVAQRKEERRARLQAQFSQMRP-VAMGPSVPPRMPMYPPGPSGLGQQFL 432
GKMI KPLYVA AQRKE+R+A LQAQFSQMRP V M P++ PR+PMYPP QQ
Sbjct: 384 GKMISGKPLYVAFAQRKEDRKAMLQAQFSQMRPAVPMTPTLAPRLPMYPPMAP---QQLF 440
Query: 433 YGQAPPAIIPPQ------------MPPRG-HAYRY------------------------- 454
YGQAPPA+IPPQ M P G H Y
Sbjct: 441 YGQAPPAMIPPQPGFGFQQQLVPGMRPGGPHMPNYFVPVVQHQQGQQGPRPGIRRGAGAQ 500
Query: 455 -------------PLGR--------NMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQP 493
P GR NM + P G + DMG G P RDA++
Sbjct: 501 GQQPVPPFQQQIVPRGRMYRYPTGRNMPEAPAMPGVAGGMMQAYDMG-GFPVRDAALSPA 559
Query: 494 MPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESP 553
I L++ALANA+PEQQRT+LGE+LYPLVEQLE + AAKVTGMLLEMDQTEVLHLLESP
Sbjct: 560 AQIGTLTSALANANPEQQRTILGENLYPLVEQLEPNQAAKVTGMLLEMDQTEVLHLLESP 619
Query: 554 EALKAKVAEAMEVLRSVAQQQ-ANNPADQLASLSLNENLVS 593
+ALK+KVAEAM+VL +VA QQ AN P QLA+LSL E ++S
Sbjct: 620 DALKSKVAEAMDVLHNVAHQQNANTPTSQLAALSLTEGIIS 660
>gi|326492626|dbj|BAJ90169.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511122|dbj|BAJ87575.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 663
Score = 767 bits (1980), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/622 (63%), Positives = 467/622 (75%), Gaps = 63/622 (10%)
Query: 32 LYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVL 91
LYVGDLD +V D+QL+D+FSQVG V+SVRVCRD++TR SLGY YVN+++PADAARAL++L
Sbjct: 44 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 103
Query: 92 NFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIAT 151
NFTP+N K IRIMYS+RDPS RKSG NIFIKNLDKSID+KAL+DTFS+FGNILSCK+AT
Sbjct: 104 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVAT 163
Query: 152 DGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNV 211
+ SG+SKG+GFVQ+E ESAQNAI++LNGML+NDK+V+VG F+RKQERE V KFNNV
Sbjct: 164 EMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNV 223
Query: 212 FVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNG 271
+VKNL ESTT+++LK++FG +G ITS +V+R DGKS+CFGFVNFEN DDA AVE LNG
Sbjct: 224 YVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNG 283
Query: 272 KKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSI-DDEKLKE 330
KKFDD+E YVG+AQKKSERE +LK FE++ KET D+ QG NLY+KNL S+ DDEKLKE
Sbjct: 284 KKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLKE 343
Query: 331 LFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRK 390
LF+EFGTITSCKVMRD +G++KGSGFVAF + E+A+RAL MNGKM+ SKPLYVA+AQRK
Sbjct: 344 LFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQRK 403
Query: 391 EERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPPQ------ 444
EERRARLQAQFSQMRPV M P V PRMPMYPPG G+GQQ YGQ PPA + PQ
Sbjct: 404 EERRARLQAQFSQMRPV-MPPPVAPRMPMYPPGVPGMGQQLFYGQPPPAFVNPQPGYGFQ 462
Query: 445 -------------MP------------------------------PRGH----------A 451
MP P GH
Sbjct: 463 QHMIPGMRPGVAPMPNFVMPMVQQGQQPQRPSGRRAGAGGMQQPMPMGHQQMVPRGGRGG 522
Query: 452 YRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALSTALANASPEQQ 511
YRY GR M + F G G M P +MG P D Q + AL++ALAN+ PEQQ
Sbjct: 523 YRYASGRGMPEAAF-RGVGGMAPSLYEMGRMTP-GDTGAPQQVSSGALASALANSPPEQQ 580
Query: 512 RTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVA 571
R +LGESLYPLV+QLE D AAKVTGMLLEMDQTEVLHL+ESP+ALK+KVAEAMEVLRS
Sbjct: 581 RLMLGESLYPLVDQLEHDQAAKVTGMLLEMDQTEVLHLIESPDALKSKVAEAMEVLRSAQ 640
Query: 572 QQQANNPADQLASLSLNENLVS 593
QQQ N PADQLA+LSL++ V+
Sbjct: 641 QQQTNVPADQLAALSLSDGFVA 662
>gi|297802580|ref|XP_002869174.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297315010|gb|EFH45433.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 625
Score = 764 bits (1974), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/655 (62%), Positives = 475/655 (72%), Gaps = 97/655 (14%)
Query: 1 MAQIQVQHQAQMSGPNG----------VAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLF 50
MAQ+Q+Q Q PNG + GA+ F TTSLYVGDLD NVTDSQL+D F
Sbjct: 1 MAQVQLQGQT----PNGSTVAVTSAPVTSGGATAAGFGTTSLYVGDLDVNVTDSQLFDAF 56
Query: 51 SQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDP 110
SQ+G V+SVRVCRDL+TRRSLGYGYVN+ NP DAARA+ LN+ PL K IR+MYSHRDP
Sbjct: 57 SQMGPVVSVRVCRDLATRRSLGYGYVNFTNPQDAARAIQELNYIPLYGKPIRVMYSHRDP 116
Query: 111 SIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKES 170
S+R+SG GNIFIKNLD+SIDHKALHDTFS FGNI+SCK+A D SGQSKG+GFVQ+ N+ES
Sbjct: 117 SVRRSGAGNIFIKNLDESIDHKALHDTFSVFGNIVSCKVAVDSSGQSKGYGFVQYANEES 176
Query: 171 AQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFG 230
AQ AI+KLNGML+NDKQV+VG FLR+QER++ A KTKF NV+VKNL ESTTD+DLK FG
Sbjct: 177 AQKAIEKLNGMLLNDKQVYVGPFLRRQERDSTANKTKFTNVYVKNLAESTTDDDLKNAFG 236
Query: 231 EYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSER 290
EYG ITSAVVM+DGDGKSK FGFVNFENADDAA+AVE+LNG KFDD+EWYVG+AQKKSER
Sbjct: 237 EYGKITSAVVMKDGDGKSKGFGFVNFENADDAARAVESLNGHKFDDKEWYVGRAQKKSER 296
Query: 291 EQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGI 350
E EL+ ++EQ +KE DKFQ NLY+KNL SI DEKLKE+FS FGT+TSCKVMRDP+G
Sbjct: 297 ETELRVRYEQNLKEAADKFQSSNLYVKNLDPSISDEKLKEIFSPFGTVTSCKVMRDPNGT 356
Query: 351 SKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMG 410
SKGSGFVAFSTPEEA+ A+++++GKMI SKPLYVA+AQRKE+RRA QFSQ+RPVAM
Sbjct: 357 SKGSGFVAFSTPEEATEAMSQLSGKMIESKPLYVAIAQRKEDRRA----QFSQVRPVAMQ 412
Query: 411 PSV-------PPRMP--------------MYPPGPS-GLGQQFLYGQAPPAIIPPQ--MP 446
PSV PP P M PP P G QQ + G P P MP
Sbjct: 413 PSVGPRMPVYPPGGPGIGQQMFYGQGPPTMIPPQPGFGYQQQLVPGMRPGGGPGPNFFMP 472
Query: 447 ---------------------------------PRGHAYRYPLGRNMQDFPFDMGAGSML 473
PRG +RYP GR G +
Sbjct: 473 MVQQQQQRPGGGRRPGGIQHPQQQNPMMQQQMHPRGRMFRYPQGR---------GGSGEV 523
Query: 474 PVPVDMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAK 533
P P DMG +P +PI AL++ LANASPEQQRT+LGESLYPLVEQLE ++AAK
Sbjct: 524 P-PYDMGNNMP---------LPIGALASHLANASPEQQRTMLGESLYPLVEQLEAESAAK 573
Query: 534 VTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNPADQLASLSLN 588
VTGMLLEMDQTEVLHLLESPEALKAKVAEAM+VLRSVA A A+QLASL+L+
Sbjct: 574 VTGMLLEMDQTEVLHLLESPEALKAKVAEAMDVLRSVA---AGGAAEQLASLNLS 625
>gi|70663933|emb|CAE02947.3| OSJNBa0014K14.19 [Oryza sativa Japonica Group]
Length = 657
Score = 763 bits (1969), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/623 (64%), Positives = 463/623 (74%), Gaps = 65/623 (10%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL+ +VTDSQLY+LFSQ GQV+SVRVCRD+S+RRSLGY YVN+ NP DAARAL++
Sbjct: 40 SLYVGDLEASVTDSQLYELFSQAGQVMSVRVCRDISSRRSLGYAYVNFNNPVDAARALEL 99
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
LNF PLN K IR+MYS+RDPS R+SG+ NIFIKNLDK+IDHK LHDTFS+FGNILSCK+A
Sbjct: 100 LNFAPLNGKPIRVMYSNRDPSSRRSGSANIFIKNLDKAIDHKTLHDTFSAFGNILSCKVA 159
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNN 210
TD GQSKGFGFVQ++ E+AQ+AI LNGMLINDK V+VG FLRKQERE KTKFNN
Sbjct: 160 TDEMGQSKGFGFVQYDKGEAAQSAIKSLNGMLINDKPVYVGPFLRKQERENSVDKTKFNN 219
Query: 211 VFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALN 270
VFVKNL ESTT EDL KIFG YG ITSAV+M DGKS+CFGF+NF++ DDAA+AVE LN
Sbjct: 220 VFVKNLSESTTKEDLVKIFGAYGNITSAVIMVGMDGKSRCFGFINFKSPDDAARAVEELN 279
Query: 271 GKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKE 330
GKK +D+EWYVG+AQKKSERE ELK +FEQ+MK+ DK+QGLNLY+KNL DSI D++L E
Sbjct: 280 GKKINDKEWYVGRAQKKSEREIELKRRFEQSMKDAADKYQGLNLYMKNLDDSIGDDQLCE 339
Query: 331 LFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRK 390
LFS +G ITSCK+MRD +G+SKGSGFVAFST L EMNGKMI KPLYVA AQRK
Sbjct: 340 LFSNYGKITSCKIMRDANGVSKGSGFVAFSTLPFIQ--LTEMNGKMISGKPLYVAFAQRK 397
Query: 391 EERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPPQ------ 444
E+R+A LQAQFSQ+RPV M PS+ PR+PMYPP + LGQQ YGQAPPAI+PPQ
Sbjct: 398 EDRKAMLQAQFSQVRPVPMTPSMAPRLPMYPPM-APLGQQLFYGQAPPAIMPPQPGFGFQ 456
Query: 445 ------MPPRG-HAYRY--------------------------------------PLGR- 458
M P G H Y P GR
Sbjct: 457 QQLVPGMRPGGAHMPNYFVPVVQQGQQGPRPGIRRSGAGSAQGQQSAQPFQQQMLPRGRV 516
Query: 459 -------NMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALSTALANASPEQQ 511
NM D P G + DMG G P RDA + P PI L++ALANA+PEQQ
Sbjct: 517 YRYPPAHNMPDVPPMPGVAGGMIQSYDMG-GFPVRDAGL-SPAPIGTLTSALANANPEQQ 574
Query: 512 RTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVA 571
RT+LGESLYPLVE LE++ AAKVTGMLLEMDQTEVLHLLESPEALK+KVAEAM+VLR+VA
Sbjct: 575 RTILGESLYPLVELLEQNHAAKVTGMLLEMDQTEVLHLLESPEALKSKVAEAMDVLRNVA 634
Query: 572 QQQ-ANNPADQLASLSLNENLVS 593
QQ AN P QLA+LSL + ++S
Sbjct: 635 QQHNANTPTSQLAALSLGDAIIS 657
>gi|326516828|dbj|BAJ96406.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 744
Score = 758 bits (1958), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/626 (61%), Positives = 467/626 (74%), Gaps = 63/626 (10%)
Query: 27 FLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAAR 86
F TSLYVGDLD +V D+QL+D+F+Q+G V+SVRVCRD+++R+SLGY YVNY PADAAR
Sbjct: 122 FPATSLYVGDLDVSVQDAQLFDVFAQIGGVVSVRVCRDVTSRKSLGYAYVNYNTPADAAR 181
Query: 87 ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
AL++LNFTP+N + IRIMYS+RDPS+RKSGT NIFIKNLDKSID+KALHDTF FGNILS
Sbjct: 182 ALEMLNFTPINGRPIRIMYSNRDPSLRKSGTANIFIKNLDKSIDNKALHDTFCVFGNILS 241
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKT 206
CK+ATD +G+SKG+GFVQ+E E+A AI+KLNGML+NDK+V+VG F+RKQER+
Sbjct: 242 CKVATDPAGESKGYGFVQYERDEAAHAAIEKLNGMLMNDKKVYVGPFVRKQERDNSPGSV 301
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
KFNNV+VKNL E+TT++DLK+IFG++GTITS VVMRDGDG+SKCFGFVNFE+ D+AA AV
Sbjct: 302 KFNNVYVKNLAETTTEDDLKEIFGKFGTITSVVVMRDGDGRSKCFGFVNFESPDEAALAV 361
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
+ LNGKKF D+EWYVG+AQKKSERE ELK +FE+ ++E DK+Q NLY+KNL D++DDE
Sbjct: 362 QDLNGKKFSDKEWYVGRAQKKSEREMELKEKFEKNLQEAADKYQNTNLYLKNLDDTVDDE 421
Query: 327 KLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 386
KL+ELF+EFGTITSCKVMRD +G S+GSGFVAF + ++ASRALAEMN KM+ +KPLYVA+
Sbjct: 422 KLRELFAEFGTITSCKVMRDSNGASRGSGFVAFKSADDASRALAEMNNKMVGNKPLYVAL 481
Query: 387 AQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPPQ-- 444
AQRKE+R+ARLQAQFSQMRPV M +V PRM M PPG +GQQ YGQ PPA I PQ
Sbjct: 482 AQRKEDRKARLQAQFSQMRPVPMAQTVGPRMQMLPPG-VPVGQQMFYGQ-PPAFINPQPG 539
Query: 445 ------------------------MPPRGHAYRYPLGRN--------------------- 459
M +G + P GR
Sbjct: 540 FGFQQPFMPGMRPGGAPMPNFMMPMVQQGQQPQRPAGRRAGAGGMQQSMQMGQQQMMGRG 599
Query: 460 -MQDFPFDMGAGSMLPVPVDMG-----------AGIPRRDASVGQPMPITALSTALANAS 507
+ + + G G +P P G G+P RDA QP+PI AL++ALAN+
Sbjct: 600 GGRGYRYPTGRG--MPDPAMHGVGGVMTSPYEMGGMPMRDAGASQPVPIGALASALANSP 657
Query: 508 PEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVL 567
PE QR +LGE+LYPLV+QLE D AAKVTGMLLEMDQTEVLHLLESP+ALKAKVAEAMEV
Sbjct: 658 PETQRMMLGENLYPLVDQLEHDQAAKVTGMLLEMDQTEVLHLLESPDALKAKVAEAMEVF 717
Query: 568 RSVAQQQANNPADQLASLSLNENLVS 593
RS Q +P QLASLSLN+ L+S
Sbjct: 718 RSAQQHTNQSPEQQLASLSLNDGLIS 743
>gi|1737492|gb|AAB38974.1| poly(A)-binding protein [Triticum aestivum]
Length = 651
Score = 753 bits (1943), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/627 (61%), Positives = 467/627 (74%), Gaps = 65/627 (10%)
Query: 27 FLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAAR 86
F TSLYVGDLD +V D+QL+D+F+Q+G V+SVRVCRD+++R+SLGY YVNY PADAAR
Sbjct: 29 FPATSLYVGDLDVSVQDAQLFDVFAQIGGVVSVRVCRDVTSRKSLGYAYVNYNTPADAAR 88
Query: 87 ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
AL++LNFTP+N + IRIMYS+RDPS+RKSGT NIFIKNLDKSID+KAL+DTF FGNILS
Sbjct: 89 ALEMLNFTPINGRPIRIMYSNRDPSLRKSGTANIFIKNLDKSIDNKALYDTFCVFGNILS 148
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKT 206
CK+ATD +G+SKG+GFVQ+E E+A AI+KLNGML+NDK+V+VG F+RKQER+
Sbjct: 149 CKVATDPAGESKGYGFVQYERDEAAHAAIEKLNGMLMNDKKVYVGPFVRKQERDNSPGNV 208
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
KFNNV+VKNL E+TT++DLK+IFG++G ITS VVMRDGDG+SKCFGFVNFE+ D+AA AV
Sbjct: 209 KFNNVYVKNLAETTTEDDLKEIFGKFGAITSVVVMRDGDGRSKCFGFVNFESPDEAALAV 268
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
+ LNGKKF D+EWYVG+AQKKSERE ELK +FE+ ++E DK+Q NLY+KNL D++DDE
Sbjct: 269 QDLNGKKFSDKEWYVGRAQKKSEREIELKEKFEKNLQEAADKYQNTNLYLKNLDDTVDDE 328
Query: 327 KLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 386
KL+ELF+EFGTITSCKVMRD +G S+GSGFVAF + ++ASRALAEMN KM+ +KPLYVA+
Sbjct: 329 KLRELFAEFGTITSCKVMRDSNGASRGSGFVAFKSADDASRALAEMNNKMVGNKPLYVAL 388
Query: 387 AQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPPQMP 446
AQRKE+R+ARLQAQFSQMRPV M +V PRM M PPG +GQQ YGQ PPA I PQ
Sbjct: 389 AQRKEDRKARLQAQFSQMRPVPMAQTVGPRMQMLPPGVP-VGQQMFYGQ-PPAFINPQ-- 444
Query: 447 PRGHAYRYPL-------GRNMQDFPFDM---------------GA--------------- 469
G ++ P G M +F M GA
Sbjct: 445 -PGFGFQQPFMPGMRPGGAPMPNFMMPMVQQGQQPQRPAGRRAGAGGMQQSMQMGQQQML 503
Query: 470 ------------GSMLPVPVDMGAG-----------IPRRDASVGQPMPITALSTALANA 506
G +P P G G +P RDA QP+PI AL++ALAN+
Sbjct: 504 GRGGGRGYRYQTGRGMPDPAMHGVGGVMTSPYEMGGMPMRDAGESQPVPIGALASALANS 563
Query: 507 SPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEV 566
PE QR +LGE+LYPLV+QLE D AAKVTGMLLEMDQTEVLHLLESP+ALKAKVAEAMEV
Sbjct: 564 PPETQRMMLGENLYPLVDQLEHDQAAKVTGMLLEMDQTEVLHLLESPDALKAKVAEAMEV 623
Query: 567 LRSVAQQQANNPADQLASLSLNENLVS 593
LRS Q +P QLASLSLN+ L+S
Sbjct: 624 LRSAQQHTNQSPEQQLASLSLNDGLIS 650
>gi|168036104|ref|XP_001770548.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678256|gb|EDQ64717.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 645
Score = 748 bits (1932), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/654 (60%), Positives = 485/654 (74%), Gaps = 74/654 (11%)
Query: 1 MAQIQVQHQAQMSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVR 60
MAQ VQ QA + +G + F++TSLYVGDL+ V+++QLY++FSQVGQV+S+R
Sbjct: 1 MAQAPVQQQAPAA------SGPAPPNFVSTSLYVGDLESTVSEAQLYEIFSQVGQVVSIR 54
Query: 61 VCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNI 120
VCRDL TRRSLGY YVNY N DA RAL++LNF +N K IRIM+SHRDPSIRKSGT NI
Sbjct: 55 VCRDLITRRSLGYAYVNYNNAQDATRALELLNFNAVNGKPIRIMFSHRDPSIRKSGTANI 114
Query: 121 FIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNG 180
FIKNLDKSID+KALHDTF++FG ILSCK+ATD SGQSKG+GFVQFE +ESAQ AI+K+NG
Sbjct: 115 FIKNLDKSIDNKALHDTFAAFGTILSCKVATDPSGQSKGYGFVQFEQEESAQTAIEKVNG 174
Query: 181 MLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVV 240
ML+NDKQVFVG F+R+QER+ + +KFNNV+VKNL +STTD++LKK+F YG I+SAVV
Sbjct: 175 MLLNDKQVFVGPFVRRQERDQSGVVSKFNNVYVKNLADSTTDDELKKVFEAYGPISSAVV 234
Query: 241 MRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQ 300
MRD +GKSKCFGFVNFE+ADDAAKAVEALNGKKFD++EWYVG+AQKKSERE EL+ +FEQ
Sbjct: 235 MRDNEGKSKCFGFVNFEHADDAAKAVEALNGKKFDEKEWYVGRAQKKSEREAELRAKFEQ 294
Query: 301 AMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFS 360
KE ++K+QG+NLY+KNL D+IDDEKL+E+FSE+GTI SCKVMRDP G S+GSGFVAFS
Sbjct: 295 ERKERIEKYQGVNLYLKNLDDTIDDEKLREIFSEYGTIVSCKVMRDPQGQSRGSGFVAFS 354
Query: 361 TPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMY 420
+P+EA+RA+ EMNGKM+ SKPLYVA+AQRKEERR RLQA F+Q PV GP+VP +PMY
Sbjct: 355 SPDEATRAVTEMNGKMVGSKPLYVALAQRKEERRNRLQAAFAQRTPV--GPAVPTSLPMY 412
Query: 421 PPGPSGLGQQF-LYGQAPPAIIP--------------------------PQMPP------ 447
P G+G YGQ PP IP P +PP
Sbjct: 413 HPAGPGMGPGMSYYGQHPPGPIPLQPAAFGYQPQLIRPGGAQFPNYMGFPNVPPLRQGQQ 472
Query: 448 -----------------------RG--HAYRYPL-GRNMQD--FPFDMGAGSMLPVPVDM 479
RG +RY RN D P G+MLPVP+++
Sbjct: 473 GQRAGGRRGGAPQQQQPQQQMIQRGGNRNFRYTTNARNTPDVAVPPQGIMGAMLPVPIEI 532
Query: 480 GAGIPRRDASVG---QPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTG 536
G G+P +A G QP+PI+AL++ALA+A PEQQR +LGE LYPLV+QLE D A KVTG
Sbjct: 533 G-GVPVANADAGVPQQPLPISALASALASAPPEQQRAMLGEQLYPLVDQLEHDFAGKVTG 591
Query: 537 MLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNPADQLASLSLNEN 590
MLLEMDQTEVLHL+ESPEALKAKVAEAM+VLR +AQ + P DQL +L++ ++
Sbjct: 592 MLLEMDQTEVLHLIESPEALKAKVAEAMDVLR-MAQAVPSPPTDQLGNLAIGDS 644
>gi|357164563|ref|XP_003580095.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 661
Score = 747 bits (1929), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/627 (62%), Positives = 466/627 (74%), Gaps = 63/627 (10%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
TTSLYVGDL+ +VTDSQLY+LFSQ GQV+SVRVCRD+++RRSLGY YVN++NP DAARAL
Sbjct: 36 TTSLYVGDLEASVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNFSNPMDAARAL 95
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
++LNF PLNNK IR+MYS+RDPS R+SG+ NIFIKNLDK+ID+K LHDTFS+FG ILSCK
Sbjct: 96 EMLNFVPLNNKPIRVMYSNRDPSSRRSGSANIFIKNLDKTIDNKTLHDTFSAFGAILSCK 155
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKF 208
+ATD GQSKGFGFVQ+E +E AQ+A+ LNGMLINDK V+VG FLRKQER+ K +F
Sbjct: 156 VATDDMGQSKGFGFVQYEKEEFAQSAMKSLNGMLINDKPVYVGPFLRKQERDNSFDKARF 215
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NNVFVKNL ESTT EDL KIF EYG ITSAVVM DGKS+CFGF+NFE+ DDA +AVE
Sbjct: 216 NNVFVKNLSESTTKEDLVKIFSEYGNITSAVVMVGTDGKSRCFGFINFESPDDAVRAVEE 275
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
LNGKK +D+EWY G+AQKKSERE +LK +FEQ+MK+ DK+QG NLY+KNL D I D++L
Sbjct: 276 LNGKKINDKEWYCGRAQKKSEREMDLKRRFEQSMKDAADKYQGQNLYLKNLDDGISDDQL 335
Query: 329 KELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
+ELFS FG ITSCKVMRD +G+SKGSGFVAFST EEAS+A+ EMNGKM+ KPLYVA AQ
Sbjct: 336 RELFSTFGKITSCKVMRDQNGVSKGSGFVAFSTREEASQAITEMNGKMLSGKPLYVAFAQ 395
Query: 389 RKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPA--------- 439
RKEER+A LQAQFSQMRPV + PS+ PR+PMYPP + LGQQ YGQAPP
Sbjct: 396 RKEERKAMLQAQFSQMRPVPITPSMTPRLPMYPPM-APLGQQLFYGQAPPPMMPPQPGFG 454
Query: 440 ----IIPPQMPPRGHAYRY--PLGRNMQDFP----FDMGAGS-------------MLP-- 474
++P P H Y P+ + Q P GAGS M+P
Sbjct: 455 FQQQLVPGMRPSGAHMPNYFVPVVQQGQQGPRPGMRRSGAGSVQGQQSAQSYQQQMVPRG 514
Query: 475 ------------VP-----VDMGAG----------IPRRDASVGQPMPITALSTALANAS 507
+P +GAG P RDA + PI L++ALANA+
Sbjct: 515 RVYRYPPGPGRNMPEVQPMAGVGAGGMIQPYDMGGFPVRDAGLSPAAPIGTLTSALANAT 574
Query: 508 PEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVL 567
P+QQRTLLGESLYPLVE LE + AAKVTGMLLEMDQTEVLHLLESPEALK+KVAEAM+VL
Sbjct: 575 PDQQRTLLGESLYPLVELLEHNQAAKVTGMLLEMDQTEVLHLLESPEALKSKVAEAMDVL 634
Query: 568 RSVAQQQ-ANNPADQLASLSLNENLVS 593
R+VAQQQ N P QLA LS+ ++++S
Sbjct: 635 RNVAQQQNPNAPTSQLAGLSMTDSIIS 661
>gi|357145576|ref|XP_003573691.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 663
Score = 745 bits (1923), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/624 (63%), Positives = 473/624 (75%), Gaps = 63/624 (10%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
TSLYVGDLD +V D+QL+D+FSQVG V+SVRVCRD++TR SLGY YVN+++PADAARA++
Sbjct: 42 TSLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARAME 101
Query: 90 VLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKI 149
+LNFTP+N K IRIMYS+RDPS RKSG NIFIKNLDKSID+KAL DTFS+FG ILSCK+
Sbjct: 102 MLNFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALFDTFSAFGTILSCKV 161
Query: 150 ATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFN 209
AT+ SG+SKG+GFVQ+E ESAQNAI++LNGML+NDK+V+VG F+RKQERE V KFN
Sbjct: 162 ATEISGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPKFN 221
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEAL 269
NV+VKNL ESTT+++LK++FG++G ITS +V+R DGKS+CFGFVNFEN DDAA+AVE L
Sbjct: 222 NVYVKNLSESTTEDNLKEMFGKFGPITSVIVVRADDGKSRCFGFVNFENPDDAARAVEDL 281
Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSI-DDEKL 328
NGKK DD+E YVG+AQKKSERE +LK +FE++ KET DK QG NLY+KNL S+ DDEKL
Sbjct: 282 NGKKLDDKELYVGRAQKKSEREMQLKEKFEKSNKETADKNQGTNLYLKNLDGSVDDDEKL 341
Query: 329 KELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
KELF+EFGTITSCKVMRD +G++KGSGFVAF + E+ASRAL MNGKM+ SKPLYVA+AQ
Sbjct: 342 KELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDASRALVAMNGKMVGSKPLYVALAQ 401
Query: 389 RKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAP----------- 437
RKEERRARLQAQFSQMRPV M P V PRMPMYPPG G+GQQ YGQ P
Sbjct: 402 RKEERRARLQAQFSQMRPVVMPPPVAPRMPMYPPGVPGMGQQMFYGQPPPPFVNPQPGFG 461
Query: 438 ----------PAIIP--------------PQMP--------------PRGH--------- 450
P + P PQ P P GH
Sbjct: 462 FQQHMIPGMRPGVAPMPNFVMPMVQQGQQPQRPSGRRAGAGGMQQPMPMGHQQMLPRGGR 521
Query: 451 -AYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALSTALANASPE 509
YRY GR M D PF G G M+P P +MG + D Q +P L++ALAN+ PE
Sbjct: 522 GGYRYASGRGMPDSPF-RGVGGMVPSPYEMGR-MTLNDNGAPQQVPSGTLASALANSPPE 579
Query: 510 QQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRS 569
QQR +LGESLYPLV+QLE D AAKVTGMLLEMDQTEVLHL+ESP+ALK+KVAEAM+VLRS
Sbjct: 580 QQRLMLGESLYPLVDQLEHDQAAKVTGMLLEMDQTEVLHLIESPDALKSKVAEAMDVLRS 639
Query: 570 VAQQQANNPADQLASLSLNENLVS 593
AQQQ + PADQLA+LSL++ V+
Sbjct: 640 -AQQQTSAPADQLAALSLSDGFVA 662
>gi|168053933|ref|XP_001779388.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669186|gb|EDQ55778.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 650
Score = 738 bits (1905), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/626 (61%), Positives = 472/626 (75%), Gaps = 67/626 (10%)
Query: 27 FLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAAR 86
F++TSLYVGDL+ NV+++QLY+LF+QVGQV+S+RVCRDL TRRSLGY YVNY + DA R
Sbjct: 25 FVSTSLYVGDLEPNVSEAQLYELFTQVGQVVSIRVCRDLITRRSLGYAYVNYNSAQDATR 84
Query: 87 ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
AL++LNF+ LN IRIM+SHRDPSIRKSGT NIFIKNLDK+ID+KALHDTFS+FG ILS
Sbjct: 85 ALELLNFSVLNGNPIRIMFSHRDPSIRKSGTANIFIKNLDKTIDNKALHDTFSAFGGILS 144
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKT 206
CK+A DGSGQSKG+GFVQFE +ESA AI+K+NGML+NDKQVFVG F+R+QER+ +
Sbjct: 145 CKVAVDGSGQSKGYGFVQFEQEESALTAIEKVNGMLLNDKQVFVGPFVRRQERDQSGGVS 204
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
KFNNV+VKNL E+TT++DLK +FG YGTI+SAVVMRD DGKSKCFGFVNFE+ D+AAKAV
Sbjct: 205 KFNNVYVKNLGENTTEDDLKNVFGAYGTISSAVVMRDSDGKSKCFGFVNFEHPDNAAKAV 264
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
EALNGKK D++EWYVG+AQKKSERE EL+ +FEQ KE ++K+QG+NLY+KNL D++DDE
Sbjct: 265 EALNGKKRDEKEWYVGRAQKKSEREAELRAKFEQERKERIEKYQGVNLYLKNLDDTVDDE 324
Query: 327 KLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 386
KL+ELF+++GTITSCKVMRDP G S+GSGFVAFS+PEEA+RA+ EMNGKM+ SKPLYVA+
Sbjct: 325 KLRELFADYGTITSCKVMRDPQGQSRGSGFVAFSSPEEATRAVTEMNGKMVGSKPLYVAL 384
Query: 387 AQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAP--------- 437
AQRKEERRARLQA F+QMR ++ P+VP +PMY PGP Q YGQ P
Sbjct: 385 AQRKEERRARLQAAFAQMR-TSVSPAVPTSLPMYHPGPGMSPQMPYYGQHPSGPIPLQPA 443
Query: 438 -----PAIIPP------------------------------------------QMPPRG- 449
P II P QM RG
Sbjct: 444 AFGYQPQIIRPGGAQFPNYIGYANVPLRQGQQGQRAGGRRGGAPQQQQQQLQQQMIQRGG 503
Query: 450 -HAYRY-PLGRNMQD--FPFDMGAGSMLPVPVDMGAGIPRRDASVG---QPMPITALSTA 502
RY P RNM D P G+M+PVP+++G G+P + G QP+PI+AL++A
Sbjct: 504 NRNLRYTPNARNMPDTAVPPQGIMGAMVPVPLEIG-GLPVANVDSGVPQQPLPISALASA 562
Query: 503 LANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAE 562
LA+A PEQQR +LGE LYPLV+QLE D A KVTGMLLEMDQTEVLHL+ESPEAL+AKVAE
Sbjct: 563 LASAPPEQQRAMLGEQLYPLVDQLEHDYAGKVTGMLLEMDQTEVLHLIESPEALRAKVAE 622
Query: 563 AMEVLRSVAQQQANNPADQLASLSLN 588
AM+VLR +AQ P D+L +LS++
Sbjct: 623 AMDVLR-MAQAAPVAPTDELGNLSIS 647
>gi|297821595|ref|XP_002878680.1| PAB4 binding protein 4 [Arabidopsis lyrata subsp. lyrata]
gi|297324519|gb|EFH54939.1| PAB4 binding protein 4 [Arabidopsis lyrata subsp. lyrata]
Length = 655
Score = 738 bits (1905), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/638 (60%), Positives = 461/638 (72%), Gaps = 73/638 (11%)
Query: 17 GVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYV 76
G+ G N SLYVGDLDFNVTDSQLYD F++V QV+SVRVCRD +T SLGYGYV
Sbjct: 28 GIGGGDGVNHGALCSLYVGDLDFNVTDSQLYDYFTEVCQVVSVRVCRDAATNTSLGYGYV 87
Query: 77 NYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHD 136
NY+N DA +A+ LN++ LN K IRI YS RD S R+SG GN+F+KNLDKS+D+K LH+
Sbjct: 88 NYSNTEDAEKAMQKLNYSTLNGKMIRITYSSRDSSARRSGVGNLFVKNLDKSVDNKTLHE 147
Query: 137 TFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRK 196
TFS G I+SCK+A D GQS+G+GFVQF+ ++SA+NAI+KLNG ++NDKQ+FVG FLRK
Sbjct: 148 TFSGCGTIVSCKVAADHMGQSRGYGFVQFDTEDSAKNAIEKLNGKVLNDKQIFVGPFLRK 207
Query: 197 QERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNF 256
+ERE+ A K KF NV+VKNL E TTD++LK FG+YG+I+SAVVMRDGDGKS+CFGFVNF
Sbjct: 208 EERESAADKMKFTNVYVKNLSEVTTDDELKTTFGQYGSISSAVVMRDGDGKSRCFGFVNF 267
Query: 257 ENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYI 316
EN +DAA+AVEALNGKKFDD+EWYVGKAQKKSERE EL ++EQ + +KF GLNLY+
Sbjct: 268 ENPEDAARAVEALNGKKFDDKEWYVGKAQKKSERELELSRRYEQGSSDAGNKFDGLNLYV 327
Query: 317 KNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKM 376
KNL D++ DEKL+ELF+EFGTITSCKVMRDPSG SKGSGFVAFS EASR L EMNGKM
Sbjct: 328 KNLDDTVTDEKLRELFAEFGTITSCKVMRDPSGTSKGSGFVAFSAASEASRVLNEMNGKM 387
Query: 377 IVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQA 436
+ KPLYVA+AQRKEERRA+LQAQFSQMRP A P V PRMP++P G GLGQQ YGQ
Sbjct: 388 VGGKPLYVALAQRKEERRAKLQAQFSQMRP-AFIPGVGPRMPIFPGGAPGLGQQIFYGQG 446
Query: 437 PPAIIPPQ-----------------------------------------------MP--- 446
P IIP Q MP
Sbjct: 447 SPPIIPHQPGFGYQPQLVPGLRPSFFPMMQPGQQGPRPGGRRSGDGPMRHQHQQPMPYMQ 506
Query: 447 ----PRGHAYRYPL-GRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALST 501
PRG YRYP GRNM D P G M+PV DM G+P + QPM L+T
Sbjct: 507 PQMMPRGRGYRYPPGGRNMPDGPM---LGGMVPVAYDMN-GMP-----IAQPMSAGQLAT 557
Query: 502 ALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVA 561
+LANA+P QQRTLLGESLYPLV+Q+E + AAKVTGMLLEMDQTEVLHLLESPEAL AKV+
Sbjct: 558 SLANATPAQQRTLLGESLYPLVDQIEHENAAKVTGMLLEMDQTEVLHLLESPEALNAKVS 617
Query: 562 EAMEVLRSVAQ--------QQANNPADQLASLSLNENL 591
EA++VLR+V Q ++ +P+D +ASLS+N++
Sbjct: 618 EALDVLRNVNQPSTQVSEGNKSGSPSDLMASLSINDHF 655
>gi|168057049|ref|XP_001780529.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668007|gb|EDQ54623.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 647
Score = 736 bits (1899), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/635 (61%), Positives = 476/635 (74%), Gaps = 70/635 (11%)
Query: 20 AGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYA 79
G + NQF++TS+YVGDL+ NV+++QLY++FSQ G V+S+RVCRDL TRRSLGY YVNY
Sbjct: 14 GGPAPNQFVSTSVYVGDLEHNVSEAQLYEIFSQTGPVVSIRVCRDLITRRSLGYAYVNYH 73
Query: 80 NPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFS 139
+ DA RAL++LNFTP+N K IRIM+SHRDPS+RKSG NIFIKNLDK+ID+KALHDTFS
Sbjct: 74 SAQDATRALELLNFTPVNGKPIRIMFSHRDPSLRKSGAANIFIKNLDKAIDNKALHDTFS 133
Query: 140 SFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER 199
+FG ILSCK+ATD SGQSKG+GFVQFE +ESAQ+AI+K+NGML+NDKQVFVG F+R+QER
Sbjct: 134 AFGGILSCKVATDSSGQSKGYGFVQFEKEESAQSAIEKVNGMLLNDKQVFVGPFVRRQER 193
Query: 200 ETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ +KFNNV+VKNL E+TTD++LKK+FG YG I+SAVVMRD +GKSKCFGFVNFE A
Sbjct: 194 DLSGGVSKFNNVYVKNLGENTTDDELKKVFGAYGPISSAVVMRDNEGKSKCFGFVNFELA 253
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
DDAAKAVEALNGKK D++EWYVG+AQKKSERE EL+ +FEQ K ++K+QG+NLY+KNL
Sbjct: 254 DDAAKAVEALNGKKQDEKEWYVGRAQKKSEREAELRAKFEQERKSRIEKYQGVNLYLKNL 313
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D++DDEKL+ELF+E+GTITSCKVM+DP G S+GSGFVAFSTPEEA+RA+ EMN KM+ S
Sbjct: 314 DDAVDDEKLRELFAEYGTITSCKVMKDPQGQSRGSGFVAFSTPEEATRAVTEMNTKMVGS 373
Query: 380 KPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQF-LYGQAPP 438
KPLYVA+AQRKEERR RLQA F+QMR +GP+VP +PMY PGP GLG Q YGQ P
Sbjct: 374 KPLYVALAQRKEERRVRLQAAFAQMR-TPVGPTVPTSLPMYHPGP-GLGPQMPYYGQHPS 431
Query: 439 AII---------PPQMPPRGHA-------------------------------------- 451
I PPQ+ G A
Sbjct: 432 GPIPLQPAAFGYPPQIMRPGGAQIPNYIGYPNVSLSQGQQGQRAGGRRGGAPQQQQQQSQ 491
Query: 452 -----------YRY-PLGRNMQD--FPFDMGA-GSMLPVPVDMGAGIPRRDASVG---QP 493
+RY P RN D P G G MLPVP+++G G+P + G QP
Sbjct: 492 QQMIQRGGNRNFRYTPNVRNASDGTAPPPQGMMGVMLPVPLEIG-GMPAANVDSGVPQQP 550
Query: 494 MPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESP 553
+PI+AL++ALA+A P+QQR +LGE LYPLV+QLE + A KVTGMLLEMDQTEVLHL+ESP
Sbjct: 551 LPISALASALASAPPDQQRAMLGEQLYPLVDQLEHEFAGKVTGMLLEMDQTEVLHLIESP 610
Query: 554 EALKAKVAEAMEVLRSVAQQQANNPADQLASLSLN 588
EALKAKV EAMEVLR +AQ + P ++L +LS++
Sbjct: 611 EALKAKVNEAMEVLR-MAQAVPSAPTEELGNLSIS 644
>gi|13430610|gb|AAK25927.1|AF360217_1 putative poly(A) binding protein [Arabidopsis thaliana]
Length = 662
Score = 731 bits (1886), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/627 (61%), Positives = 457/627 (72%), Gaps = 75/627 (11%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
SLYVGDLDFNVTDSQLYD F++V QV+SVRVCRD +T SLGYGYVNY+N DA +A+
Sbjct: 46 CSLYVGDLDFNVTDSQLYDYFTEVCQVVSVRVCRDAATNTSLGYGYVNYSNTDDAEKAMQ 105
Query: 90 VLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKI 149
LN++ LN K IRI YS RD S R+SG GN+F+KNLDKS+D+K LH+ FS G I+SCK+
Sbjct: 106 KLNYSYLNGKMIRITYSSRDSSARRSGVGNLFVKNLDKSVDNKTLHEAFSGCGTIVSCKV 165
Query: 150 ATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFN 209
ATD GQS+G+GFVQF+ ++SA+NAI+KLNG ++NDKQ+FVG FLRK+ERE+ A K KF
Sbjct: 166 ATDHMGQSRGYGFVQFDTEDSAKNAIEKLNGKVLNDKQIFVGPFLRKEERESAADKMKFT 225
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEAL 269
NV+VKNL E+TTD++LK FG+YG+I+SAVVMRDGDGKS+CFGFVNFEN +DAA+AVEAL
Sbjct: 226 NVYVKNLSEATTDDELKTTFGQYGSISSAVVMRDGDGKSRCFGFVNFENPEDAARAVEAL 285
Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLK 329
NGKKFDD+EWYVGKAQKKSERE EL ++EQ + +KF GLNLY+KNL D++ DEKL+
Sbjct: 286 NGKKFDDKEWYVGKAQKKSERELELSRRYEQGSSDGGNKFDGLNLYVKNLDDTVTDEKLR 345
Query: 330 ELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQR 389
ELF+EFGTITSCKVMRDPSG SKGSGFVAFS EASR L EMNGKM+ KPLYVA+AQR
Sbjct: 346 ELFAEFGTITSCKVMRDPSGTSKGSGFVAFSAASEASRVLNEMNGKMVGGKPLYVALAQR 405
Query: 390 KEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAIIP------- 442
KEERRA+LQAQFSQMRP A P V PRMP++ G GLGQQ YGQ PP IIP
Sbjct: 406 KEERRAKLQAQFSQMRP-AFIPGVGPRMPIFTGGAPGLGQQIFYGQGPPPIIPHQPGFGY 464
Query: 443 -PQMPP------------------------------------------------RGHAYR 453
PQ+ P RG YR
Sbjct: 465 QPQLVPGMRPAFFGGPMMQPGQQGPRPGGRRSGDGPMRHQHQQPMPYMQPQMMPRGRGYR 524
Query: 454 YPL-GRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALSTALANASPEQQR 512
YP GRNM D P G M+PV DM +P QPM L+T+LANA+P QQR
Sbjct: 525 YPSGGRNMPDGPM---PGGMVPVAYDMNV-MP-----YSQPMSAGQLATSLANATPAQQR 575
Query: 513 TLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQ 572
TLLGESLYPLV+Q+E + AAKVTGMLLEMDQTEVLHLLESPEAL AKV+EA++VLR+V Q
Sbjct: 576 TLLGESLYPLVDQIESEHAAKVTGMLLEMDQTEVLHLLESPEALNAKVSEALDVLRNVNQ 635
Query: 573 --------QQANNPADQLASLSLNENL 591
++ +P+D LASLS+N++L
Sbjct: 636 PSSQGSDGNKSGSPSDLLASLSINDHL 662
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 24 GNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPAD 83
GN+F +LYV +LD VTD +L +LF++ G + S +V RD S S G G+V ++ ++
Sbjct: 322 GNKFDGLNLYVKNLDDTVTDEKLRELFAEFGTITSCKVMRDPSG-TSKGSGFVAFSAASE 380
Query: 84 AARALDVLNFTPLNNKSIRIMYSHR 108
A+R L+ +N + K + + + R
Sbjct: 381 ASRVLNEMNGKMVGGKPLYVALAQR 405
>gi|15227815|ref|NP_179916.1| poly(A) binding protein 4 [Arabidopsis thaliana]
gi|2642429|gb|AAB87097.1| putative poly(A) binding protein [Arabidopsis thaliana]
gi|15292851|gb|AAK92796.1| putative poly(A) binding protein [Arabidopsis thaliana]
gi|19310779|gb|AAL85120.1| putative poly(A) binding protein [Arabidopsis thaliana]
gi|330252352|gb|AEC07446.1| poly(A) binding protein 4 [Arabidopsis thaliana]
Length = 662
Score = 730 bits (1885), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/627 (61%), Positives = 457/627 (72%), Gaps = 75/627 (11%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
SLYVGDLDFNVTDSQLYD F++V QV+SVRVCRD +T SLGYGYVNY+N DA +A+
Sbjct: 46 CSLYVGDLDFNVTDSQLYDYFTEVCQVVSVRVCRDAATNTSLGYGYVNYSNTDDAEKAMQ 105
Query: 90 VLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKI 149
LN++ LN K IRI YS RD S R+SG GN+F+KNLDKS+D+K LH+ FS G I+SCK+
Sbjct: 106 KLNYSYLNGKMIRITYSSRDSSARRSGVGNLFVKNLDKSVDNKTLHEAFSGCGTIVSCKV 165
Query: 150 ATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFN 209
ATD GQS+G+GFVQF+ ++SA+NAI+KLNG ++NDKQ+FVG FLRK+ERE+ A K KF
Sbjct: 166 ATDHMGQSRGYGFVQFDTEDSAKNAIEKLNGKVLNDKQIFVGPFLRKEERESAADKMKFT 225
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEAL 269
NV+VKNL E+TTD++LK FG+YG+I+SAVVMRDGDGKS+CFGFVNFEN +DAA+AVEAL
Sbjct: 226 NVYVKNLSEATTDDELKTTFGQYGSISSAVVMRDGDGKSRCFGFVNFENPEDAARAVEAL 285
Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLK 329
NGKKFDD+EWYVGKAQKKSERE EL ++EQ + +KF GLNLY+KNL D++ DEKL+
Sbjct: 286 NGKKFDDKEWYVGKAQKKSERELELSRRYEQGSSDGGNKFDGLNLYVKNLDDTVTDEKLR 345
Query: 330 ELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQR 389
ELF+EFGTITSCKVMRDPSG SKGSGFVAFS EASR L EMNGKM+ KPLYVA+AQR
Sbjct: 346 ELFAEFGTITSCKVMRDPSGTSKGSGFVAFSAASEASRVLNEMNGKMVGGKPLYVALAQR 405
Query: 390 KEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAIIP------- 442
KEERRA+LQAQFSQMRP A P V PRMP++ G GLGQQ YGQ PP IIP
Sbjct: 406 KEERRAKLQAQFSQMRP-AFIPGVGPRMPIFTGGAPGLGQQIFYGQGPPPIIPHQPGFGY 464
Query: 443 -PQMPP------------------------------------------------RGHAYR 453
PQ+ P RG YR
Sbjct: 465 QPQLVPGMRPAFFGGPMMQPGQQGPRPGGRRSGDGPMRHQHQQPMPYMQPQMMPRGRGYR 524
Query: 454 YPL-GRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALSTALANASPEQQR 512
YP GRNM D P G M+PV DM +P QPM L+T+LANA+P QQR
Sbjct: 525 YPSGGRNMPDGPM---PGGMVPVAYDMNV-MP-----YSQPMSAGQLATSLANATPAQQR 575
Query: 513 TLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQ 572
TLLGESLYPLV+Q+E + AAKVTGMLLEMDQTEVLHLLESPEAL AKV+EA++VLR+V Q
Sbjct: 576 TLLGESLYPLVDQIESEHAAKVTGMLLEMDQTEVLHLLESPEALNAKVSEALDVLRNVNQ 635
Query: 573 --------QQANNPADQLASLSLNENL 591
++ +P+D LASLS+N++L
Sbjct: 636 PSSQGSEGNKSGSPSDLLASLSINDHL 662
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 24 GNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPAD 83
GN+F +LYV +LD VTD +L +LF++ G + S +V RD S S G G+V ++ ++
Sbjct: 322 GNKFDGLNLYVKNLDDTVTDEKLRELFAEFGTITSCKVMRDPSG-TSKGSGFVAFSAASE 380
Query: 84 AARALDVLNFTPLNNKSIRIMYSHR 108
A+R L+ +N + K + + + R
Sbjct: 381 ASRVLNEMNGKMVGGKPLYVALAQR 405
>gi|449501704|ref|XP_004161443.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
2-like [Cucumis sativus]
Length = 576
Score = 728 bits (1879), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/573 (67%), Positives = 435/573 (75%), Gaps = 64/573 (11%)
Query: 84 AARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGN 143
AARALDVLNFTP N K IR+MYSHRDPSIRKSG GNIFIKNLDK+IDHKALHDTFS+FG+
Sbjct: 5 AARALDVLNFTPXNGKPIRVMYSHRDPSIRKSGAGNIFIKNLDKAIDHKALHDTFSAFGS 64
Query: 144 ILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVA 203
ILSCK+A D SGQSKG+GFVQF+N+ESA AI+KLNGML+NDKQV+VG FLRKQER+ V
Sbjct: 65 ILSCKVALDSSGQSKGYGFVQFDNEESALKAIEKLNGMLLNDKQVYVGPFLRKQERDGVV 124
Query: 204 IKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAA 263
K+KFNNVFVKNL E+TT+EDL K F E+GT+TS VVMRD DGKS+CFGFVNFENADDAA
Sbjct: 125 DKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVMRDADGKSRCFGFVNFENADDAA 184
Query: 264 KAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSI 323
+AV+ LNGK DD+EWYVGKAQKKSERE ELK +FEQ MKE DK+QG NLYIKNL DSI
Sbjct: 185 RAVDTLNGKLVDDKEWYVGKAQKKSEREVELKHRFEQTMKEAADKYQGANLYIKNLDDSI 244
Query: 324 DDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLY 383
D+KLKELF+ FGTITSCKVMRDP+GIS+GSGFVAFSTP+EASRAL EMNGKM+VSKPLY
Sbjct: 245 GDDKLKELFAPFGTITSCKVMRDPNGISRGSGFVAFSTPDEASRALVEMNGKMVVSKPLY 304
Query: 384 VAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPG------------------PS 425
VA+AQRKE+RRARLQAQFSQ+R V M SV PRMP+YPPG PS
Sbjct: 305 VALAQRKEDRRARLQAQFSQIRSVPMPASVAPRMPIYPPGGPGIGQQLFYGQAPPAMIPS 364
Query: 426 ----GLGQQFLYGQAP-----PAIIPPQ-------------------------------- 444
G QQ + G P P P
Sbjct: 365 QGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQGQQGQRPGGRRAGAVQQTQQPVPMMQQQM 424
Query: 445 MPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALSTALA 504
+P G YRYP GR + D AG M VP DMG G+P RDA+ QP+PI AL++ALA
Sbjct: 425 LPRGGRVYRYPPGRGLPDVAMPGVAGGMFSVPYDMG-GMPLRDAAHSQPIPIGALASALA 483
Query: 505 NASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAM 564
NA+P+QQRT+LGE+LYPLVEQLE D AAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAM
Sbjct: 484 NATPDQQRTMLGENLYPLVEQLEPDNAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAM 543
Query: 565 EVLRSV----AQQQANNPADQLASLSLNENLVS 593
EVLR+V QQQA N ADQLASLSL ENLVS
Sbjct: 544 EVLRNVAAAQQQQQAGNAADQLASLSLTENLVS 576
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 109/287 (37%), Positives = 167/287 (58%), Gaps = 19/287 (6%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ +LD + L+D FS G +LS +V D S+ +S GYG+V + N A +A++
Sbjct: 40 NIFIKNLDKAIDHKALHDTFSAFGSILSCKVALD-SSGQSKGYGFVQFDNEESALKAIEK 98
Query: 91 LNFTPLNNKSIRI----MYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
LN LN+K + + RD + KS N+F+KNL ++ + L+ FS FG + S
Sbjct: 99 LNGMLLNDKQVYVGPFLRKQERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTS 158
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKT 206
+ D G+S+ FGFV FEN + A A+D LNG L++DK+ +VG +K ERE V +K
Sbjct: 159 IVVMRDADGKSRCFGFVNFENADDAARAVDTLNGKLVDDKEWYVGKAQKKSERE-VELKH 217
Query: 207 KFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGF 253
+F N+++KNLD+S D+ LK++F +GTITS VMRD +G S+ GF
Sbjct: 218 RFEQTMKEAADKYQGANLYIKNLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISRGSGF 277
Query: 254 VNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQ 300
V F D+A++A+ +NGK + YV AQ+K +R L+ QF Q
Sbjct: 278 VAFSTPDEASRALVEMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQ 324
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
+ +++ +LY+ +LD ++ D +L +LF+ G + S +V RD S G G+V ++ P
Sbjct: 226 AADKYQGANLYIKNLDDSIGDDKLKELFAPFGTITSCKVMRD-PNGISRGSGFVAFSTPD 284
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHR 108
+A+RAL +N + +K + + + R
Sbjct: 285 EASRALVEMNGKMVVSKPLYVALAQR 310
>gi|222629159|gb|EEE61291.1| hypothetical protein OsJ_15377 [Oryza sativa Japonica Group]
Length = 613
Score = 717 bits (1850), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/579 (65%), Positives = 438/579 (75%), Gaps = 21/579 (3%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL+ +VTDSQLY+ F GQV+SVRVCRD+ RS G YVN+ NP DAARAL++
Sbjct: 40 SLYVGDLEASVTDSQLYE-FQPGGQVMSVRVCRDIRLGRSFGKPYVNFNNPVDAARALEL 98
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
LNF PLN K IR+MYS+RDPS R+SG+ NIFIKNLDK+IDHK LHDTFS+FGNILSCK+A
Sbjct: 99 LNFAPLNGKPIRVMYSNRDPSSRRSGSANIFIKNLDKAIDHKTLHDTFSAFGNILSCKVA 158
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNN 210
TD GQSKGFGFVQ++ E+AQ+AI LNGMLINDK V+VG FLRKQERE KTKFNN
Sbjct: 159 TDEMGQSKGFGFVQYDKGEAAQSAIKSLNGMLINDKPVYVGPFLRKQERENSVDKTKFNN 218
Query: 211 VFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALN 270
VFVKNL ESTT EDL KIFG YG ITSAV+M DGKS+CFGF+NF++ DDAA+AVE LN
Sbjct: 219 VFVKNLSESTTKEDLVKIFGAYGNITSAVIMVGMDGKSRCFGFINFKSPDDAARAVEELN 278
Query: 271 GKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKE 330
GKK +D+EWYVG+AQKKSERE ELK +FEQ+MK+ DK+QGLNLY+KNL DSI D++L E
Sbjct: 279 GKKINDKEWYVGRAQKKSEREIELKRRFEQSMKDAADKYQGLNLYMKNLDDSIGDDQLCE 338
Query: 331 LFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRK 390
LFS +G ITSCK+MRD +G+SKGSGFVAFST EEAS+AL EMNGKMI KPLYVA AQRK
Sbjct: 339 LFSNYGKITSCKIMRDANGVSKGSGFVAFSTREEASQALTEMNGKMISGKPLYVAFAQRK 398
Query: 391 EERRARLQAQFSQMRPVAMGPSVPP---RMPMY------------PPGPSGLGQQFLYGQ 435
E+R+A LQ F + + P + P MP Y PG G GQ
Sbjct: 399 EDRKAMLQPGFGFQQQLV--PGMRPGGAHMPNYFVPVVQQGQQGPRPGIRRSGAGSAQGQ 456
Query: 436 APPAIIPPQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMP 495
QM PRG YRYP NM D P G + DMG G P RDA + P P
Sbjct: 457 QSAQPFQQQMLPRGRVYRYPPAHNMPDVPPMPGVAGGMIQSYDMG-GFPVRDAGL-SPAP 514
Query: 496 ITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEA 555
I L++ALANA+PEQQRT+LGESLYPLVE LE++ AAKVTGMLLEMDQTEVLHLLESPEA
Sbjct: 515 IGTLTSALANANPEQQRTILGESLYPLVELLEQNHAAKVTGMLLEMDQTEVLHLLESPEA 574
Query: 556 LKAKVAEAMEVLRSVAQQQ-ANNPADQLASLSLNENLVS 593
LK+KVAEAM+VLR+VAQQ AN P QLA+LSL + ++S
Sbjct: 575 LKSKVAEAMDVLRNVAQQHNANTPTSQLAALSLGDAIIS 613
>gi|302754900|ref|XP_002960874.1| hypothetical protein SELMODRAFT_21095 [Selaginella moellendorffii]
gi|302767436|ref|XP_002967138.1| hypothetical protein SELMODRAFT_10868 [Selaginella moellendorffii]
gi|300165129|gb|EFJ31737.1| hypothetical protein SELMODRAFT_10868 [Selaginella moellendorffii]
gi|300171813|gb|EFJ38413.1| hypothetical protein SELMODRAFT_21095 [Selaginella moellendorffii]
Length = 619
Score = 714 bits (1844), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/630 (60%), Positives = 465/630 (73%), Gaps = 74/630 (11%)
Query: 27 FLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAAR 86
F++TSLYVGDLD NV+++QLYDLF+Q+GQVLS+RVCRDL TRRSLGY YVNY N DA R
Sbjct: 1 FVSTSLYVGDLDPNVSENQLYDLFNQIGQVLSIRVCRDLMTRRSLGYAYVNYNNVQDATR 60
Query: 87 ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
AL++LNFTP+N K++RIM+SHRDPSIRKSGT NIFIKNLD++ID+KALHDTF SFGNILS
Sbjct: 61 ALELLNFTPVNGKAVRIMFSHRDPSIRKSGTANIFIKNLDRAIDNKALHDTFVSFGNILS 120
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKT 206
CK+ATD +GQSKG+GFVQFE +ESAQ AIDK+NGML+ +KQVFVG F+R+QERE
Sbjct: 121 CKVATDSNGQSKGYGFVQFEQEESAQVAIDKVNGMLVAEKQVFVGPFVRRQEREQ---NG 177
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
KFNNVFVKNL ESTTD++LK++FG +G ITSAVVMRD DGKSKCFGFVNFEN D+AAKAV
Sbjct: 178 KFNNVFVKNLGESTTDDELKEVFGAFGKITSAVVMRDSDGKSKCFGFVNFENPDEAAKAV 237
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
LNGKK +D+EWYVG+AQKKSERE EL+ ++EQ KE +D++QG NLY+KNL D +DDE
Sbjct: 238 VGLNGKKIEDKEWYVGRAQKKSEREAELRAKYEQERKERIDRYQGANLYLKNLDDDVDDE 297
Query: 327 KLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 386
+L+E+F++FG+ITSCKVMRD G SKGSGFVA+S PEEA+RA EMNGKMI SKP+YVA+
Sbjct: 298 RLREIFADFGSITSCKVMRDAQGQSKGSGFVAYSAPEEANRATIEMNGKMIGSKPIYVAM 357
Query: 387 AQRKEERRARLQAQFSQMR-PVAMGPSVPPRMPMYPPGPSGLGQQ--------------- 430
AQRKEERRA+LQAQF+QMR PV + + MPMY PG GLGQQ
Sbjct: 358 AQRKEERRAKLQAQFAQMRSPVGVATT----MPMYHPGAPGLGQQLFYGQPPALMPPQPA 413
Query: 431 -FLY-----------GQAPPAIIP---PQMPP---------------------------- 447
F Y GQ P +P Q P
Sbjct: 414 GFAYQQQMLGMRPGGGQLPSYFVPVVQRQGPQGGQRAAGARRGAAGTPVPQQQLPPPQQQ 473
Query: 448 --RGHA-YRY-PLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALSTAL 503
RG+ +RY P RN + P ++LPVP+++ + + + +PI AL++AL
Sbjct: 474 MIRGNRNFRYTPSARNTPEVPVPPQLVNVLPVPLEIPSVPLTPVSPLPPSLPIGALASAL 533
Query: 504 ANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEA 563
A+ASPE QR +LGE LYPLV+QLE D A KVTGMLLEMDQTE+LHLLE+P+ALKAKVAEA
Sbjct: 534 ASASPEHQRVMLGEQLYPLVDQLEHDHAGKVTGMLLEMDQTEILHLLEAPDALKAKVAEA 593
Query: 564 MEVLRSVAQQQANNPADQLASLSLNENLVS 593
MEVLR Q +P+ +LASLSLNE + S
Sbjct: 594 MEVLR----QAQRSPSTELASLSLNEPIPS 619
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
+++ +LY+ +LD +V D +L ++F+ G + S +V RD + +S G G+V Y+ P +A
Sbjct: 278 DRYQGANLYLKNLDDDVDDERLREIFADFGSITSCKVMRD-AQGQSKGSGFVAYSAPEEA 336
Query: 85 ARALDVLNFTPLNNKSIRIMYSHR 108
RA +N + +K I + + R
Sbjct: 337 NRATIEMNGKMIGSKPIYVAMAQR 360
>gi|147785105|emb|CAN75447.1| hypothetical protein VITISV_030926 [Vitis vinifera]
Length = 632
Score = 690 bits (1780), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/628 (58%), Positives = 446/628 (71%), Gaps = 50/628 (7%)
Query: 1 MAQIQVQHQAQMSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVR 60
++ + VQ M+G + AAG F SLYVGDLD + + QLYDLF QV VLS+R
Sbjct: 16 LSPVAVQQSTAMTG-HTAAAG-----FANASLYVGDLDTAIGEGQLYDLFQQVAPVLSIR 69
Query: 61 VCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNI 120
VCRD + R SLGY YVN+A+P DA AL+ LNFTPLN K IRIM+SHRDPSIRKSG N+
Sbjct: 70 VCRDQARRASLGYAYVNFASPQDATNALEHLNFTPLNGKPIRIMFSHRDPSIRKSGFANV 129
Query: 121 FIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNG 180
FIKNLD SID+KAL DTF++FG +LSCKIA D +GQSKG+GFVQFE +E+AQNAI +LNG
Sbjct: 130 FIKNLDPSIDNKALLDTFAAFGTVLSCKIALDNNGQSKGYGFVQFEQEEAAQNAIKRLNG 189
Query: 181 MLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVV 240
MLINDKQV+VG F+R QER KF NV+VKNL E+TTD+DLK IFG+YG+ITSAVV
Sbjct: 190 MLINDKQVYVGLFVRHQERNXGNGSPKFTNVYVKNLSETTTDDDLKNIFGKYGSITSAVV 249
Query: 241 MRDGDGKSKCFGFVNFENADDAAKAVEALNGKKF-DDREWYVGKAQKKSEREQELKGQFE 299
MRD G SKCFGFVNF+++D AA AVE LNG F DD+ WYVGKAQ+KSERE EL+ +FE
Sbjct: 250 MRDASGMSKCFGFVNFQSSDSAAAAVEHLNGATFNDDKVWYVGKAQRKSEREAELRAKFE 309
Query: 300 QAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAF 359
Q K +KF+G NLY+KNL DS++DEKL ELFSEFGTITSCKVM DP G+SKGSGFVAF
Sbjct: 310 QERKNKFEKFKGXNLYLKNLDDSVNDEKLXELFSEFGTITSCKVMLDPQGLSKGSGFVAF 369
Query: 360 STPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR-PVAMGPSVPPRMP 418
TPEEA+RAL MNGKMI KPLYVAVAQRKEER+ARLQAQF+Q+R P AM P + +P
Sbjct: 370 LTPEEATRALNVMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRSPGAMTP-LQSGVP 428
Query: 419 MYPPGPSGLG-QQFLYGQAPPAIIPPQMPPRGHAYRYPLGRNMQD-------FPFD---- 466
+ G L QQ +GQ P +IP Q P G+ ++ L M+ P+
Sbjct: 429 GFHSGAPRLAPQQLYFGQGTPGLIPTQ--PAGYGFQQQLMPGMRPGVAPNFIMPYQLQRQ 486
Query: 467 ------MGA------------------GSMLPVPVDM-GAGIPRRDASVGQPMPITALST 501
MG G ++P+P D+ G + D P+P++ L++
Sbjct: 487 GQPGQRMGVRRGGNSQQMQHQQQPASWGPVMPLPFDVSGMPVSPMDIQRTGPVPMSTLAS 546
Query: 502 ALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVA 561
ALA+ +P+ QR +LGE L+PLVE++ER+ A KVTGMLLEMDQTEVLHL+ESP+ALK KVA
Sbjct: 547 ALASTTPDNQRLMLGEQLFPLVERIERETAGKVTGMLLEMDQTEVLHLIESPDALKNKVA 606
Query: 562 EAMEVLRSVAQQQANNPADQLASLSLNE 589
EAM+VLR A N+ DQL SL LNE
Sbjct: 607 EAMDVLR--ASSSGNDVGDQLGSLXLNE 632
>gi|302808075|ref|XP_002985732.1| hypothetical protein SELMODRAFT_122762 [Selaginella moellendorffii]
gi|300146641|gb|EFJ13310.1| hypothetical protein SELMODRAFT_122762 [Selaginella moellendorffii]
Length = 635
Score = 684 bits (1765), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/648 (56%), Positives = 447/648 (68%), Gaps = 96/648 (14%)
Query: 1 MAQIQVQHQAQMSGPNGVAAGASG-------NQFLTTSLYVGDLDFNVTDSQLYDLFSQV 53
MAQIQVQ +G V S NQF +TSLYVGDLD NVT+ QLYD+F+QV
Sbjct: 1 MAQIQVQPSPGSAGAVPVPVPVSVPVSPAAPNQFFSTSLYVGDLDPNVTEGQLYDVFNQV 60
Query: 54 GQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIR 113
VLS+RVCRDL ++RSLGY YVNY DA+RAL++LNF+ +N K IRIM+SHRDPSIR
Sbjct: 61 APVLSIRVCRDLISKRSLGYAYVNYNTGQDASRALEMLNFSLVNGKPIRIMFSHRDPSIR 120
Query: 114 KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQN 173
KSG NIFIKNLDKSID+KAL+DTF+ FGNILSCK+A D SGQS+G+GFVQFE +++AQ+
Sbjct: 121 KSGMANIFIKNLDKSIDNKALYDTFAQFGNILSCKVAVDSSGQSRGYGFVQFEQEDAAQS 180
Query: 174 AIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYG 233
AI ++NGML+ +KQVFVG F+R+QER+ KFNNV+VKNL ++TTD+DLK++FGE+G
Sbjct: 181 AIKQVNGMLLIEKQVFVGPFVRRQERDLTGGIAKFNNVYVKNLGDATTDDDLKRVFGEFG 240
Query: 234 TITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQE 293
I+SAVVMRD +GKSKCFGFVNFENADDAA AVE LNGKK DD+EWYVG+AQKKSERE E
Sbjct: 241 PISSAVVMRDPEGKSKCFGFVNFENADDAALAVEELNGKKMDDKEWYVGRAQKKSEREAE 300
Query: 294 LKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKG 353
L+ +++Q KE DK+QG+NLY+KNL D+IDD+KL+ELF FGTI SCKVMRDP G SKG
Sbjct: 301 LRARYDQERKERSDKYQGVNLYLKNLDDTIDDDKLRELFHGFGTIISCKVMRDPQGHSKG 360
Query: 354 SGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRA--RLQAQFSQMR-PVAMG 410
SGFVAFST EEA+RA+ EMNG+M+ +KP+YVA+AQ+++ERR QAQF+ R PV +G
Sbjct: 361 SGFVAFSTTEEANRAMTEMNGRMVANKPIYVALAQKRDERRRFNAAQAQFAPFRVPVGLG 420
Query: 411 PSVPPRMPMY-------------------PPGPSGLG--QQFLYGQAPPAIIPPQMP--- 446
P+V +PM+ PP P+G QQ + G P PQ+P
Sbjct: 421 PAVASSVPMFHPGAGMGQPVFYGQHPPAFPPQPAGFAYQQQMMSGMRPGG---PQLPFYS 477
Query: 447 --------------------------------------------PRGHAYRY-PLGRNMQ 461
RG +RY P RN
Sbjct: 478 LPIVQRQPQPQQRPNARRGGAPQQQQQQQQQQQQPPQLMSQQVCCRGRNFRYTPTSRNSS 537
Query: 462 DFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYP 521
D AG MLPVP++ + G PI L++ALA+ASP QR +LGE LYP
Sbjct: 538 D------AGGMLPVPLEA--------SETGILPPINVLASALASASPTDQRVMLGEQLYP 583
Query: 522 LVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRS 569
LV+ LE + A KVTGMLLEMDQTEVLHL+ESPEALKAKVAEAM+VLR+
Sbjct: 584 LVDNLEHECAGKVTGMLLEMDQTEVLHLIESPEALKAKVAEAMDVLRN 631
>gi|302785327|ref|XP_002974435.1| hypothetical protein SELMODRAFT_101161 [Selaginella moellendorffii]
gi|300158033|gb|EFJ24657.1| hypothetical protein SELMODRAFT_101161 [Selaginella moellendorffii]
Length = 642
Score = 683 bits (1762), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/652 (55%), Positives = 449/652 (68%), Gaps = 97/652 (14%)
Query: 1 MAQIQVQHQAQMSGPNGVAAGASG-------NQFLTTSLYVGDLDFNVTDSQLYDLFSQV 53
MAQIQVQ +G V S NQF +TSLYVGDLD NVT+ QLYD+F+QV
Sbjct: 1 MAQIQVQPSPGSAGAVPVPVPVSVPVSPAAPNQFFSTSLYVGDLDPNVTEGQLYDVFNQV 60
Query: 54 GQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIR 113
VLS+RVCRDL ++RSLGY YVNY DA+RAL++LNF+ +N K IRIM+SHRDPSIR
Sbjct: 61 APVLSIRVCRDLISKRSLGYAYVNYNTGQDASRALEMLNFSLVNGKPIRIMFSHRDPSIR 120
Query: 114 KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQN 173
KSG NIFIKNLDKSID+KAL+DTF+ FGNILSCK+A D SGQS+G+GFVQFE +++AQ+
Sbjct: 121 KSGMANIFIKNLDKSIDNKALYDTFAQFGNILSCKVAVDSSGQSRGYGFVQFEQEDAAQS 180
Query: 174 AIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYG 233
AI ++NGML+ +KQVFVG F+R+QER+ TKFNNV+VKNL ++TTD+DLK++FGE+G
Sbjct: 181 AIKQVNGMLLIEKQVFVGPFVRRQERDLTGGVTKFNNVYVKNLGDATTDDDLKRVFGEFG 240
Query: 234 TITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQE 293
I+SAVVMRD +GKSKCFGFVNFENADDAA AVE LNGKK DD+EWYVG+AQKKSERE E
Sbjct: 241 PISSAVVMRDPEGKSKCFGFVNFENADDAALAVEELNGKKMDDKEWYVGRAQKKSEREAE 300
Query: 294 LKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKG 353
L+ +++Q KE DK+QG+NLY+KNL D+IDD+KL+ELF FGTI SCKVMRDP G SKG
Sbjct: 301 LRARYDQERKERSDKYQGVNLYLKNLDDTIDDDKLRELFHGFGTIISCKVMRDPQGHSKG 360
Query: 354 SGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRA--RLQAQFSQMR-PVAMG 410
SGFVAFST EEA+RA+ EMNG+M+ +KP+YVA+AQ+++ERR QAQF+ R PV +G
Sbjct: 361 SGFVAFSTTEEANRAMTEMNGRMVANKPIYVALAQKRDERRRFNAAQAQFAPFRVPVGLG 420
Query: 411 PSVPPRMPMY-------------------PPGPSGLG--QQFLYGQAP------------ 437
P+V +PM+ PP P+G QQ + G P
Sbjct: 421 PAVASSVPMFHPGAGMGQPVFYGQHPPAFPPQPAGFAYQQQMMSGMRPGGPQLPFYSLPI 480
Query: 438 ---------------------------------------PAIIPPQMPPRGHAYRY-PLG 457
P ++ Q+ RG +RY P
Sbjct: 481 VQRQPQPQQRPNARRGGAPQQQQQQQQQQQQQQQQQQQPPQLMSQQVCCRGRNFRYTPTS 540
Query: 458 RNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGE 517
RN D AG MLPVP++ + G PI L++ALA+ASP QR +LGE
Sbjct: 541 RNSSD------AGGMLPVPLEA--------SETGILPPINVLASALASASPTDQRVMLGE 586
Query: 518 SLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRS 569
LYPLV+ LE + A KVTGMLLEMDQTEVLHL+ESPEALKAKVAEAM+VLR+
Sbjct: 587 QLYPLVDNLEHECAGKVTGMLLEMDQTEVLHLIESPEALKAKVAEAMDVLRN 638
>gi|224085256|ref|XP_002307525.1| predicted protein [Populus trichocarpa]
gi|222856974|gb|EEE94521.1| predicted protein [Populus trichocarpa]
Length = 614
Score = 681 bits (1758), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/609 (57%), Positives = 435/609 (71%), Gaps = 51/609 (8%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A QF +SLYVGDL+ NV + QL+DLFSQV QV+S+RVCRD + R SLGY YVN++NP
Sbjct: 15 AEAGQFPNSSLYVGDLEHNVNEGQLFDLFSQVAQVVSIRVCRDQARRASLGYAYVNFSNP 74
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
DAA A+++LNFTPLN K+IRIM SHRDPS+RKSG N+FIKNLD SID+KAL +TF+SF
Sbjct: 75 QDAANAMELLNFTPLNGKAIRIMVSHRDPSMRKSGHANVFIKNLDTSIDNKALQETFASF 134
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
G +LSCK+A D +GQSKG+GFVQFEN+E+AQ+AI++LNGMLINDK+VFVG F+R QER
Sbjct: 135 GPVLSCKVAVDNNGQSKGYGFVQFENEEAAQSAINRLNGMLINDKEVFVGRFVRHQERIE 194
Query: 202 VAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADD 261
KF NV+VKNL E+T+DEDLKK F YG+ITSA+VM+D GKSK FGFVNF++ D
Sbjct: 195 ATGSPKFTNVYVKNLSETTSDEDLKKFFSNYGSITSAIVMKDQSGKSKGFGFVNFQSPDS 254
Query: 262 AAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGD 321
AA AVE LNG F+D+ WYVG+AQ+K ERE ELK +FEQ +K + NLY+KNL D
Sbjct: 255 AAAAVEKLNGTTFNDKVWYVGRAQRKGEREAELKARFEQERNSRYEKLKAANLYLKNLDD 314
Query: 322 SIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKP 381
IDDEKLKELFSEFG+ITSCKVM D G+SKGSGFVAFSTPEEASRAL MNGKMI KP
Sbjct: 315 KIDDEKLKELFSEFGSITSCKVMLDQQGLSKGSGFVAFSTPEEASRALNGMNGKMIGKKP 374
Query: 382 LYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLG-QQFLYGQAPPAI 440
LYVAVAQR+EER+ARLQA F+Q++ + P +P +P Y PG L QQ +GQ +
Sbjct: 375 LYVAVAQRREERKARLQAHFTQIQAPGLSP-MPSGLPGYHPGAPRLAPQQLFFGQGTAGM 433
Query: 441 IPPQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLP-------------------------- 474
+PPQ P G+ ++ L M+ +G ++P
Sbjct: 434 MPPQ--PAGYGFQQQLLPGMRA---GVGPNFVMPYQMQRQGQQGQRMGIRRGGNHQQIQQ 488
Query: 475 -------------VPVDMGAGIPR--RDASVGQPMPITALSTALANASPEQQRTLLGESL 519
P +G+P DA P+PI+AL+TALA+A+PE++ +LGE L
Sbjct: 489 QQQVHYRLNVFQRFPPLTASGMPVTPSDAQRTAPVPISALTTALASATPEKRMVMLGEQL 548
Query: 520 YPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNPA 579
YPLVE+LE D AKVTGMLLEMDQTEVLHL+ESP+ALK KVAEAM+VL+ V A++
Sbjct: 549 YPLVERLEPDHVAKVTGMLLEMDQTEVLHLIESPDALKKKVAEAMQVLQEVG---ASSVG 605
Query: 580 DQLASLSLN 588
DQL SL+LN
Sbjct: 606 DQLGSLALN 614
>gi|359495203|ref|XP_002263507.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein 3
[Vitis vinifera]
Length = 1093
Score = 681 bits (1757), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/631 (58%), Positives = 443/631 (70%), Gaps = 67/631 (10%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
G +F SLYVGDLD + + QLYDLF QV VLS+RVCRD + R SLGY YVN+A+P
Sbjct: 466 CGGRFANASLYVGDLDTAIGEGQLYDLFQQVAPVLSIRVCRDQARRASLGYAYVNFASPQ 525
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
DA AL+ LNFTPLN K IRIM+SHRDPSIRKSG N+FIKNLD SID+KAL DTF++FG
Sbjct: 526 DATNALEHLNFTPLNGKPIRIMFSHRDPSIRKSGFANVFIKNLDPSIDNKALLDTFAAFG 585
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 202
+LSCKIA D +GQSKG+GFVQFE +E+AQNAI +LNGMLINDKQV+VG F+R QER
Sbjct: 586 TVLSCKIALDNNGQSKGYGFVQFEQEEAAQNAIKRLNGMLINDKQVYVGLFVRHQERNRG 645
Query: 203 AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDA 262
KF NV+VKNL E+TTD+DLK IFG+YG+ITSAVVMRD G SKCFGFVNF+++D A
Sbjct: 646 NGSPKFTNVYVKNLSETTTDDDLKNIFGKYGSITSAVVMRDASGMSKCFGFVNFQSSDSA 705
Query: 263 AKAVEALNGKKF-DDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGD 321
A AVE LNG F DD+ WYVGKAQ+KSERE EL+ +FEQ K +KF+G NLY+KNL D
Sbjct: 706 AAAVEHLNGATFNDDKVWYVGKAQRKSEREAELRAKFEQERKNKFEKFKGTNLYLKNLDD 765
Query: 322 SIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKP 381
S++DEKLKELFSEFGTITSCKVM DP G+SKGSGFVAF TPEEA+RAL MNGKMI KP
Sbjct: 766 SVNDEKLKELFSEFGTITSCKVMLDPQGLSKGSGFVAFLTPEEATRALNVMNGKMIGRKP 825
Query: 382 LYVAVAQRKEERRARLQAQFSQMR-PVAMGP---SVP------PRMP------------M 419
LYVAVAQRKEER+ARLQAQF+Q+R P AM P VP PR+ +
Sbjct: 826 LYVAVAQRKEERKARLQAQFAQIRSPGAMTPLQSGVPGFHSGAPRLAPQQLYFGQGTPGL 885
Query: 420 YPPGPSGLG--QQFLYGQ----APPAIIPPQMPPRG------------------------ 449
P P+G G QQ + G AP I+P Q+ +G
Sbjct: 886 IPTQPAGYGFQQQLMPGMRPGVAPNFIMPYQLQRQGQPGQRMGVRRGGNSQQMQHQQQPL 945
Query: 450 ------HAYRYPL-GRNMQDFPFDMGAGSM---LPVPVDM-GAGIPRRDASVGQPMPITA 498
+YRY GRN D P + G M +P+P D+ G + D P+P++
Sbjct: 946 LHRNSNQSYRYMANGRNGVD-PSMVPQGLMGPVMPLPFDVSGMPVSPMDIQRTGPVPMST 1004
Query: 499 LSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKA 558
L++ALA+ +P+ QR +LGE L+PLVE++ER+ A KVTGMLLEMDQTEVLHL+ESP+ALK
Sbjct: 1005 LASALASTTPDNQRLMLGEQLFPLVERIERETAGKVTGMLLEMDQTEVLHLIESPDALKN 1064
Query: 559 KVAEAMEVLRSVAQQQANNPADQLASLSLNE 589
KVAEAM+VLR A N+ DQL SL LNE
Sbjct: 1065 KVAEAMDVLR--ASSSGNDVGDQLGSLMLNE 1093
>gi|297739370|emb|CBI29360.3| unnamed protein product [Vitis vinifera]
Length = 633
Score = 678 bits (1749), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/627 (58%), Positives = 441/627 (70%), Gaps = 67/627 (10%)
Query: 27 FLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAAR 86
F SLYVGDLD + + QLYDLF QV VLS+RVCRD + R SLGY YVN+A+P DA
Sbjct: 10 FANASLYVGDLDTAIGEGQLYDLFQQVAPVLSIRVCRDQARRASLGYAYVNFASPQDATN 69
Query: 87 ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
AL+ LNFTPLN K IRIM+SHRDPSIRKSG N+FIKNLD SID+KAL DTF++FG +LS
Sbjct: 70 ALEHLNFTPLNGKPIRIMFSHRDPSIRKSGFANVFIKNLDPSIDNKALLDTFAAFGTVLS 129
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKT 206
CKIA D +GQSKG+GFVQFE +E+AQNAI +LNGMLINDKQV+VG F+R QER
Sbjct: 130 CKIALDNNGQSKGYGFVQFEQEEAAQNAIKRLNGMLINDKQVYVGLFVRHQERNRGNGSP 189
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
KF NV+VKNL E+TTD+DLK IFG+YG+ITSAVVMRD G SKCFGFVNF+++D AA AV
Sbjct: 190 KFTNVYVKNLSETTTDDDLKNIFGKYGSITSAVVMRDASGMSKCFGFVNFQSSDSAAAAV 249
Query: 267 EALNGKKF-DDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDD 325
E LNG F DD+ WYVGKAQ+KSERE EL+ +FEQ K +KF+G NLY+KNL DS++D
Sbjct: 250 EHLNGATFNDDKVWYVGKAQRKSEREAELRAKFEQERKNKFEKFKGTNLYLKNLDDSVND 309
Query: 326 EKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVA 385
EKLKELFSEFGTITSCKVM DP G+SKGSGFVAF TPEEA+RAL MNGKMI KPLYVA
Sbjct: 310 EKLKELFSEFGTITSCKVMLDPQGLSKGSGFVAFLTPEEATRALNVMNGKMIGRKPLYVA 369
Query: 386 VAQRKEERRARLQAQFSQMR-PVAMGP---SVP------PRMP------------MYPPG 423
VAQRKEER+ARLQAQF+Q+R P AM P VP PR+ + P
Sbjct: 370 VAQRKEERKARLQAQFAQIRSPGAMTPLQSGVPGFHSGAPRLAPQQLYFGQGTPGLIPTQ 429
Query: 424 PSGLG--QQFLYGQ----APPAIIPPQMPPRG---------------------------- 449
P+G G QQ + G AP I+P Q+ +G
Sbjct: 430 PAGYGFQQQLMPGMRPGVAPNFIMPYQLQRQGQPGQRMGVRRGGNSQQMQHQQQPLLHRN 489
Query: 450 --HAYRYPL-GRNMQDFPFDMGAGSM---LPVPVDM-GAGIPRRDASVGQPMPITALSTA 502
+YRY GRN D P + G M +P+P D+ G + D P+P++ L++A
Sbjct: 490 SNQSYRYMANGRNGVD-PSMVPQGLMGPVMPLPFDVSGMPVSPMDIQRTGPVPMSTLASA 548
Query: 503 LANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAE 562
LA+ +P+ QR +LGE L+PLVE++ER+ A KVTGMLLEMDQTEVLHL+ESP+ALK KVAE
Sbjct: 549 LASTTPDNQRLMLGEQLFPLVERIERETAGKVTGMLLEMDQTEVLHLIESPDALKNKVAE 608
Query: 563 AMEVLRSVAQQQANNPADQLASLSLNE 589
AM+VLR A N+ DQL SL LNE
Sbjct: 609 AMDVLR--ASSSGNDVGDQLGSLMLNE 633
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 26 QFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAA 85
+F T+LY+ +LD +V D +L +LFS+ G + S +V D S G G+V + P +A
Sbjct: 292 KFKGTNLYLKNLDDSVNDEKLKELFSEFGTITSCKVMLD-PQGLSKGSGFVAFLTPEEAT 350
Query: 86 RALDVLNFTPLNNKSIRIMYSHR 108
RAL+V+N + K + + + R
Sbjct: 351 RALNVMNGKMIGRKPLYVAVAQR 373
>gi|398327|emb|CAA81127.1| poly(A)-mRNA binding protein [Anemia phyllitidis]
Length = 638
Score = 677 bits (1747), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/648 (56%), Positives = 450/648 (69%), Gaps = 65/648 (10%)
Query: 1 MAQIQVQHQAQMSGPNGVAAGASGNQ-FLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSV 59
MAQ+ QA +A SG+ ++ SLYVGDLD +V++S+LY++F+Q+GQV+S+
Sbjct: 1 MAQVMQAQQAPT-----IATPISGSSPYVAPSLYVGDLDPDVSESELYEVFNQIGQVVSI 55
Query: 60 RVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGN 119
RVCRDL T++SLGY YVNY DA++AL++LNFT + K IRIMYSHRDPSIRKSG N
Sbjct: 56 RVCRDLMTKKSLGYAYVNYGTHQDASQALELLNFTLVKGKPIRIMYSHRDPSIRKSGAAN 115
Query: 120 IFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLN 179
IFIKNL+KSID+KALHDTFS+FG ILSC++ D +G SKG+GFVQFE +ESAQ AI+K+N
Sbjct: 116 IFIKNLEKSIDNKALHDTFSAFGTILSCRVVMDDAGNSKGYGFVQFEKEESAQIAIEKVN 175
Query: 180 GMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAV 239
GMLIND+QV V F+RKQER+ + K FNNV+VKNL E+TTDEDL+K+F +G I+SAV
Sbjct: 176 GMLINDRQVSVAPFIRKQERDMASSKN-FNNVYVKNLAEATTDEDLRKVFAGFGPISSAV 234
Query: 240 VMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFE 299
VMRD DGKSKCFGFVNFEN DDAA AVE LNGK +++EWYVG+AQKKSERE ELK +FE
Sbjct: 235 VMRDADGKSKCFGFVNFENVDDAANAVENLNGKLINEKEWYVGRAQKKSEREAELKAKFE 294
Query: 300 QAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAF 359
Q KE +KFQG+NLY+KN+ DSIDDEKL+ELF+ FGT+TSCKVM+ P G S GSGFV F
Sbjct: 295 QVRKEKEEKFQGVNLYLKNIDDSIDDEKLRELFAVFGTVTSCKVMKSPQGQSMGSGFVTF 354
Query: 360 STPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPV--AMGPSVPPRM 417
S PEEA +A+ +MNGKM+ SKPLYVA+AQRKEERRARLQAQF+QM+ V P P
Sbjct: 355 SAPEEAMQAVNDMNGKMVGSKPLYVALAQRKEERRARLQAQFAQMQIVAPNAPPMAPNPP 414
Query: 418 PMYPPGPSGLGQQFLYGQAPPAIIPPQMPPRGHAYRYPLGRNMQDFPFDMGA-------- 469
MY PGP G+G Q YGQ P ++P Q G Y+ P+ M+ P G
Sbjct: 415 SMYHPGPQGMGHQMFYGQPAPGLLPSQ--ANGFGYQQPMVPTMR--PTSAGVPNYFMPVQ 470
Query: 470 --GSMLPVPVDMGAGI---------------PR------RDASVGQPMPITALS----TA 502
G + PV+ G+ PR R + + MP + +
Sbjct: 471 RPGQQIQRPVNRRGGVGPLQPQHHQPPPQQFPRGGNRSMRYSQFSRTMPDSTMQGFGMMG 530
Query: 503 LANAS----------------PEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEV 546
ANAS PE+QR +LGE LYPLV++LE D A KVTGMLLEMDQ EV
Sbjct: 531 AANASNIGLMPALASALASASPEEQRVMLGEQLYPLVDRLEHDHAGKVTGMLLEMDQPEV 590
Query: 547 LHLLESPEALKAKVAEAMEVLR-SVAQQQANNPADQLASLSLNENLVS 593
LHL++ LKAKVAEAM+VLR + +N+P DQLASLSL E+L S
Sbjct: 591 LHLIDLLRQLKAKVAEAMDVLRMAQGSISSNSPLDQLASLSLTESLTS 638
>gi|217074874|gb|ACJ85797.1| unknown [Medicago truncatula]
Length = 494
Score = 669 bits (1726), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/426 (76%), Positives = 371/426 (87%), Gaps = 1/426 (0%)
Query: 16 NGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGY 75
N VAA NQ TTSLYVGDLD +VTDSQLYDLF+Q+GQV+SVR+CRDL++++SLGYGY
Sbjct: 10 NDVAAAPVPNQLTTTSLYVGDLDHDVTDSQLYDLFNQIGQVVSVRICRDLASQQSLGYGY 69
Query: 76 VNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALH 135
VN++NP DAA+A+DVLNFTPLNNK IRIMYSHRDPS+RKSG NIFIKNLD++IDHKAL+
Sbjct: 70 VNFSNPHDAAKAMDVLNFTPLNNKPIRIMYSHRDPSVRKSGAANIFIKNLDRAIDHKALY 129
Query: 136 DTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLR 195
DTFS FGNILSCKIA D SG SKG+GFVQFEN+ESAQ+AIDKLNGML+NDK V+VGHF R
Sbjct: 130 DTFSIFGNILSCKIAMDASGLSKGYGFVQFENEESAQSAIDKLNGMLLNDKPVYVGHFQR 189
Query: 196 KQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVN 255
KQ+R+ KFNNV+VKNL ES TD+DLK FGEYGTITSAVVMRD DGKSKCFGFVN
Sbjct: 190 KQDRDNALSNAKFNNVYVKNLSESVTDDDLKNTFGEYGTITSAVVMRDVDGKSKCFGFVN 249
Query: 256 FENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLY 315
FENAD AA+AVEALNGKKFDD+EWYVGKA KK ERE ELK + EQ+MKETVDKF G NLY
Sbjct: 250 FENADAAAEAVEALNGKKFDDKEWYVGKALKKYERELELKERHEQSMKETVDKFYGANLY 309
Query: 316 IKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGK 375
+KNL DS+ DEKL ELFSEFGT+TSCK++RDP GIS+GSGFVAFSTPEEA+RALAEMNGK
Sbjct: 310 LKNLDDSVTDEKLSELFSEFGTVTSCKILRDPQGISRGSGFVAFSTPEEATRALAEMNGK 369
Query: 376 MIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQ 435
M+ KPLYVA AQ+KEER+ARL AQFSQ+RPV M P + PR+P YP G G+GQQ +YGQ
Sbjct: 370 MVAGKPLYVAPAQKKEERKARLPAQFSQVRPVTMAP-IAPRLPFYPAGVPGMGQQIMYGQ 428
Query: 436 APPAII 441
APPA I
Sbjct: 429 APPAFI 434
>gi|224085260|ref|XP_002307526.1| predicted protein [Populus trichocarpa]
gi|222856975|gb|EEE94522.1| predicted protein [Populus trichocarpa]
Length = 649
Score = 668 bits (1723), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/629 (56%), Positives = 438/629 (69%), Gaps = 65/629 (10%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A QF +SLYVGDL+ NV + QL+DLFSQV QV+S+RVCRD + R SLGY YVN++NP
Sbjct: 25 AEAGQFPNSSLYVGDLEHNVNEGQLFDLFSQVAQVVSIRVCRDQARRASLGYAYVNFSNP 84
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
DA+ A+++LNFTPLN K+IRIM SHRDPS+RKSG N+FIKNLD SID+KAL +TF+SF
Sbjct: 85 QDASNAMELLNFTPLNGKAIRIMVSHRDPSMRKSGHANVFIKNLDTSIDNKALQETFASF 144
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
G++LSCK+A D +GQSKG+GFVQFEN+E+AQ+AI++LNGMLINDK+VFVG F+R QER
Sbjct: 145 GSVLSCKVAVDNNGQSKGYGFVQFENEEAAQSAINRLNGMLINDKEVFVGRFVRHQERIE 204
Query: 202 VAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADD 261
KF NV+VKNL E+T+DEDLKK F YG ITSA+VM+D GKSK FGFVNF++ D
Sbjct: 205 ATGSPKFTNVYVKNLSETTSDEDLKKFFSNYGAITSAIVMKDQSGKSKGFGFVNFQSPDS 264
Query: 262 AAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGD 321
AA AVE LNG F+D+ WYVG+AQ+K ERE ELK +FEQ +K + NLY+KNL D
Sbjct: 265 AAAAVEKLNGTTFNDKVWYVGRAQRKGEREAELKARFEQERNSRYEKLKAANLYLKNLDD 324
Query: 322 SIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKP 381
IDDEKLKELFSEFG+ITSCKVM D G+SKGSGFVAFSTPEEASRAL MNGKMI KP
Sbjct: 325 KIDDEKLKELFSEFGSITSCKVMLDQQGLSKGSGFVAFSTPEEASRALNGMNGKMIGKKP 384
Query: 382 LYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMP----------------------M 419
LYVAVAQR+EER+ARLQA F+Q++ + P +P +P M
Sbjct: 385 LYVAVAQRREERKARLQAHFTQIQAPGLSP-MPSGLPGYHPGAPRLAPQQLFFGQGTAGM 443
Query: 420 YPPGPSGLG--QQFLYGQ----APPAIIPPQMPP-----------RGHAYRYP------L 456
PP P+G G QQ L G P ++P QM RG ++ L
Sbjct: 444 MPPQPAGYGFQQQLLPGMRAGVGPNFVMPYQMQRQGQQGQRMGIRRGGNHQQIQQQQQLL 503
Query: 457 GRNMQDFPFDMG---------------AGSMLPVPVDM-GAGIPRRDASVGQPMPITALS 500
RN MG G ++P P + G + DA P+PI+AL+
Sbjct: 504 HRNTNQGLRYMGNARNGIDSSAAPQGFVGPVVPFPFEASGMPVTPSDAQRTAPVPISALT 563
Query: 501 TALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKV 560
TALA+A+PE++ +LGE LYPLVE+LE D AKVTGMLLEMDQTEVLHL+ESP+ALK KV
Sbjct: 564 TALASATPEKRMVMLGEQLYPLVERLEPDQVAKVTGMLLEMDQTEVLHLIESPDALKKKV 623
Query: 561 AEAMEVLRSVAQQQANNPADQLASLSLNE 589
AEAM+VL+ V A++ DQL SL+LNE
Sbjct: 624 AEAMQVLQEVG---ASSVGDQLGSLALNE 649
>gi|356576101|ref|XP_003556172.1| PREDICTED: polyadenylate-binding protein 5-like isoform 1 [Glycine
max]
Length = 652
Score = 667 bits (1721), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/637 (56%), Positives = 438/637 (68%), Gaps = 72/637 (11%)
Query: 17 GVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYV 76
GVA G G F SLYVGDL+ NV + QLYDLFSQV Q+ S+RVCRD + R SLGY YV
Sbjct: 24 GVALG--GGPFANASLYVGDLEGNVNEEQLYDLFSQVAQIASIRVCRDQTKRSSLGYAYV 81
Query: 77 NYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHD 136
N+AN DA+ A+++LNFTPLN K IRIM+S RDPSIRKSG GN+FIKNLD SID+KALHD
Sbjct: 82 NFANAQDASNAMELLNFTPLNGKPIRIMFSQRDPSIRKSGHGNVFIKNLDTSIDNKALHD 141
Query: 137 TFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRK 196
TF++FG +LSCK+A D SGQSKG+GFVQF+N+E+AQNAI +LNGMLINDKQV+VG F+R+
Sbjct: 142 TFAAFGTVLSCKVALDSSGQSKGYGFVQFDNEEAAQNAIKRLNGMLINDKQVYVGLFIRR 201
Query: 197 QERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNF 256
QERE KF NV+VKNL E+ TDEDLKK+FG YGTITSA VM+D +GKS+CFGFVNF
Sbjct: 202 QEREQTNGSPKFTNVYVKNLSETYTDEDLKKLFGPYGTITSATVMKDVNGKSRCFGFVNF 261
Query: 257 ENADDAAKAVEALNGKKFD-DREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLY 315
+N D AA AVE LNG + DR YVG+AQ+K+ERE ELK + EQ +K QG NLY
Sbjct: 262 QNPDSAAAAVERLNGTTINNDRVLYVGRAQRKAEREAELKAKIEQERISRYEKLQGANLY 321
Query: 316 IKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGK 375
+KNL DS DEKLK+LFSEFGTITSCKVM D +G SKGSGFV+FSTPEEAS+AL EMNGK
Sbjct: 322 LKNLDDSFSDEKLKDLFSEFGTITSCKVMIDSNGRSKGSGFVSFSTPEEASKALNEMNGK 381
Query: 376 MIVSKPLYVAVAQRKEERRARLQAQFSQMR-PVAMGPSVPPRMPMYPPGPSGLG-QQFLY 433
+I KPLYVAVAQRKEER+A LQAQF+Q+R P M P +P +P+Y PG L QQ Y
Sbjct: 382 LIGRKPLYVAVAQRKEERKAHLQAQFAQIRAPGGMAP-LPAGIPLYHPGAPRLAPQQLYY 440
Query: 434 GQAPPAIIP-------------PQMPP--------------------------------- 447
GQ P +P P M P
Sbjct: 441 GQGTPGFMPPQPAGFSFQQQILPGMRPGVAPNFIMPYHLQRQGQLGQRTGVRRNGNFQQV 500
Query: 448 ---------RGHAYRY-PLGRNMQD---FPFDMGAGSMLPVPVDMGAGIPRRDASVGQPM 494
+RY P GRN D P + G M+P+P D G+G+ +P
Sbjct: 501 QQNQMLHRNSNQGFRYMPNGRNGMDPSLVPHGL-MGPMMPMPFD-GSGVTAAPNDNQRPG 558
Query: 495 PI-TALSTALANASPEQQRTLLGESLYPLVEQLERDA-AAKVTGMLLEMDQTEVLHLLES 552
+ T L++ALA+A+PE QR +LGE LYPLVE+L + AKVTGMLLEMDQ+EV++L+ES
Sbjct: 559 ALSTTLASALASATPENQRMMLGEHLYPLVERLAPNQYTAKVTGMLLEMDQSEVINLIES 618
Query: 553 PEALKAKVAEAMEVLRSVAQQQANNPADQLASLSLNE 589
PE LK KV+EAM+VL VA + + DQL S+SLNE
Sbjct: 619 PEDLKTKVSEAMQVLHEVA---SGSEVDQLGSMSLNE 652
>gi|34015145|gb|AAQ56342.1| putative poly(A)-binding protein [Oryza sativa Japonica Group]
gi|125561054|gb|EAZ06502.1| hypothetical protein OsI_28747 [Oryza sativa Indica Group]
gi|125602953|gb|EAZ42278.1| hypothetical protein OsJ_26851 [Oryza sativa Japonica Group]
Length = 456
Score = 657 bits (1696), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/420 (74%), Positives = 368/420 (87%), Gaps = 1/420 (0%)
Query: 27 FLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAAR 86
F TSLYVGDLD +V D+QL+D+FSQVG V+SVRVCRD++TR SLGY YVN+++PADAAR
Sbjct: 36 FQATSLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAAR 95
Query: 87 ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
AL++LNFTP+N K IRIMYS+RDPS RKSG NIFIKNLDKSID+KAL+DTFS FGNILS
Sbjct: 96 ALEMLNFTPINGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSVFGNILS 155
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKT 206
CK+AT+ SG+SKG+GFVQFE +E+AQNAI KLNGML+NDK+V+VG F+RKQERE V+
Sbjct: 156 CKVATEMSGESKGYGFVQFELEEAAQNAISKLNGMLLNDKKVYVGPFVRKQERENVSGNP 215
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
KFNNV+VKNL ESTT+++LK+IFG++G ITS VVMR+GDGKS+CFGFVNFEN DDAA+AV
Sbjct: 216 KFNNVYVKNLSESTTEDNLKEIFGKFGPITSVVVMREGDGKSRCFGFVNFENPDDAARAV 275
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSI-DD 325
E LNGKKFDD+EWYV +AQKKSERE ELK +FE+ +KE DK QG NLY+KNL DSI DD
Sbjct: 276 EDLNGKKFDDKEWYVCRAQKKSEREMELKEKFEKNIKEAADKNQGTNLYLKNLDDSIDDD 335
Query: 326 EKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVA 385
EKLKE+F++FGTITSCKVMRD +G+SKGSGFVAF + E+ASRAL MNGKMI SKPLYVA
Sbjct: 336 EKLKEIFADFGTITSCKVMRDLNGVSKGSGFVAFKSAEDASRALVAMNGKMIGSKPLYVA 395
Query: 386 VAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPPQM 445
+AQRKEERRARLQAQFSQMRP+ M PSV PRMPMYPPG G+GQQ YGQ PPA + PQ+
Sbjct: 396 LAQRKEERRARLQAQFSQMRPMVMPPSVAPRMPMYPPGVPGVGQQLFYGQPPPAFVNPQL 455
>gi|356576103|ref|XP_003556173.1| PREDICTED: polyadenylate-binding protein 5-like isoform 2 [Glycine
max]
Length = 642
Score = 653 bits (1684), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/618 (57%), Positives = 426/618 (68%), Gaps = 70/618 (11%)
Query: 17 GVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYV 76
GVA G G F SLYVGDL+ NV + QLYDLFSQV Q+ S+RVCRD + R SLGY YV
Sbjct: 24 GVALG--GGPFANASLYVGDLEGNVNEEQLYDLFSQVAQIASIRVCRDQTKRSSLGYAYV 81
Query: 77 NYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHD 136
N+AN DA+ A+++LNFTPLN K IRIM+S RDPSIRKSG GN+FIKNLD SID+KALHD
Sbjct: 82 NFANAQDASNAMELLNFTPLNGKPIRIMFSQRDPSIRKSGHGNVFIKNLDTSIDNKALHD 141
Query: 137 TFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRK 196
TF++FG +LSCK+A D SGQSKG+GFVQF+N+E+AQNAI +LNGMLINDKQV+VG F+R+
Sbjct: 142 TFAAFGTVLSCKVALDSSGQSKGYGFVQFDNEEAAQNAIKRLNGMLINDKQVYVGLFIRR 201
Query: 197 QERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNF 256
QERE KF NV+VKNL E+ TDEDLKK+FG YGTITSA VM+D +GKS+CFGFVNF
Sbjct: 202 QEREQTNGSPKFTNVYVKNLSETYTDEDLKKLFGPYGTITSATVMKDVNGKSRCFGFVNF 261
Query: 257 ENADDAAKAVEALNGKKFD-DREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLY 315
+N D AA AVE LNG + DR YVG+AQ+K+ERE ELK + EQ +K QG NLY
Sbjct: 262 QNPDSAAAAVERLNGTTINNDRVLYVGRAQRKAEREAELKAKIEQERISRYEKLQGANLY 321
Query: 316 IKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGK 375
+KNL DS DEKLK+LFSEFGTITSCKVM D +G SKGSGFV+FSTPEEAS+AL EMNGK
Sbjct: 322 LKNLDDSFSDEKLKDLFSEFGTITSCKVMIDSNGRSKGSGFVSFSTPEEASKALNEMNGK 381
Query: 376 MIVSKPLYVAVAQRKEERRARLQAQFSQMR-PVAMGPSVPPRMPMYPPGPSGLG-QQFLY 433
+I KPLYVAVAQRKEER+A LQAQF+Q+R P M P +P +P+Y PG L QQ Y
Sbjct: 382 LIGRKPLYVAVAQRKEERKAHLQAQFAQIRAPGGMAP-LPAGIPLYHPGAPRLAPQQLYY 440
Query: 434 GQAPPAI-------------IPPQMPP--------------------------------- 447
GQ P I P M P
Sbjct: 441 GQGTPGFMPPQPAGFSFQQQILPGMRPGVAPNFIMPYHLQRQGQLGQRTGVRRNGNFQQV 500
Query: 448 ----------RGHAYRY-PLGRNMQD---FPFDMGAGSMLPVPVDMGAGIPRRDASVGQP 493
+RY P GRN D P + G M+P+P D G+G+ +P
Sbjct: 501 QQNQQMLHRNSNQGFRYMPNGRNGMDPSLVPHGL-MGPMMPMPFD-GSGVTAAPNDNQRP 558
Query: 494 MPI-TALSTALANASPEQQRTLLGESLYPLVEQLERDA-AAKVTGMLLEMDQTEVLHLLE 551
+ T L++ALA+A+PE QR +LGE LYPLVE+L + AKVTGMLLEMDQ+EV++L+E
Sbjct: 559 GALSTTLASALASATPENQRMMLGEHLYPLVERLAPNQYTAKVTGMLLEMDQSEVINLIE 618
Query: 552 SPEALKAKVAEAMEVLRS 569
SPE LK KV+EAM+VL+S
Sbjct: 619 SPEDLKTKVSEAMQVLQS 636
>gi|255572313|ref|XP_002527095.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223533518|gb|EEF35258.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 657
Score = 646 bits (1666), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/626 (55%), Positives = 433/626 (69%), Gaps = 71/626 (11%)
Query: 26 QFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAA 85
QF SLYVGDL+ NV + QLYDLFSQ+ QV+SVRVCRD + R SLGYGYVN++NP DAA
Sbjct: 41 QFANLSLYVGDLEQNVNEEQLYDLFSQIAQVVSVRVCRDQTKRSSLGYGYVNFSNPQDAA 100
Query: 86 RALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNIL 145
A+ LNFTPLN K IRIM+SHRDPSIRKSG GN+FIKNLD ++D+K LH+TF++FG +L
Sbjct: 101 NAMKALNFTPLNGKPIRIMFSHRDPSIRKSGYGNVFIKNLDSTLDNKLLHETFAAFGTVL 160
Query: 146 SCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIK 205
SCK+A D +GQSKG+GFVQFEN+ESA+ AI L+GM +NDKQV+VG F+R+QER
Sbjct: 161 SCKVAVDSNGQSKGYGFVQFENEESAERAISFLDGMCLNDKQVYVGFFVRQQERTRTNGS 220
Query: 206 TKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKA 265
KF NV+VKNL E+ T+EDL+K+FG YGTITSA+VM+D GKS+ FGFVNF++ D AA A
Sbjct: 221 PKFTNVYVKNLSETITNEDLEKVFGVYGTITSALVMKDQTGKSRGFGFVNFQDPDSAAAA 280
Query: 266 VEALNGKK-FDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSID 324
VE LNG DD+ WYVG+AQ+KSERE ELK +FEQ ++ + NLY+KNL D+I+
Sbjct: 281 VEKLNGTTAHDDKAWYVGRAQRKSEREAELKAKFEQERNSRYERLKAANLYLKNLDDNIN 340
Query: 325 DEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYV 384
D KLKELFSEFG+ITSCKVM D G+SKGSGFVAFSTPEEASRAL EMNGKMI KPLYV
Sbjct: 341 DVKLKELFSEFGSITSCKVMLDHQGVSKGSGFVAFSTPEEASRALKEMNGKMIGRKPLYV 400
Query: 385 AVAQRKEERRARLQAQFSQMR-PVAMGP---SVP------PRMP------------MYPP 422
A+AQRKEER+ARLQA F+ +R P A+ P +P PR+ M PP
Sbjct: 401 AIAQRKEERKARLQAHFALVRAPGALAPLPSGIPGYNAGAPRLAPQQLYFGQGTPGMMPP 460
Query: 423 GPSGLG--QQFLYGQAPPA----IIPPQMPPRGH-AYRYPLGR----------------- 458
+G G QQ L P IIP + +G R + R
Sbjct: 461 QHAGYGFQQQILTSMRPAVGPNFIIPYHLQRQGQPGQRMGMRRGGNPQQMQQQQQLLHRN 520
Query: 459 NMQDFPF-----DMG---------AGSMLPVPVDM-GAGIPRRDASVGQPMPITALSTAL 503
N Q + + G AG M+P+P ++ GA + V P+ I+ L++AL
Sbjct: 521 NNQGLRYVGNARNSGNSSVVPQGLAGPMVPLPFEVSGASV-----DVQPPVTISTLASAL 575
Query: 504 ANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEA 563
A+A+PE++ +LG+ LYPLVE+L+ D AKVTGMLLEMDQTEVLHL+ESP++LK KVAEA
Sbjct: 576 ASATPEKRTEMLGDHLYPLVERLQPDHVAKVTGMLLEMDQTEVLHLIESPDSLKKKVAEA 635
Query: 564 MEVLRSVAQQQANNPADQLASLSLNE 589
M+VLR + N DQL SL LNE
Sbjct: 636 MQVLR----EATANVGDQLGSLVLNE 657
>gi|168018573|ref|XP_001761820.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686875|gb|EDQ73261.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 439
Score = 645 bits (1664), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/427 (70%), Positives = 369/427 (86%), Gaps = 2/427 (0%)
Query: 20 AGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYA 79
+G + QF++TSLYVGDL+ NV+++QLY++FSQVGQV+S+RVCRDL TRRSLGY YVNY
Sbjct: 14 SGPAPTQFVSTSLYVGDLEPNVSEAQLYEMFSQVGQVVSIRVCRDLITRRSLGYSYVNYN 73
Query: 80 NPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFS 139
N DA RAL++LNFT +N K IRIM+SHRDPSIRKSGT NIFIKNLDKSID+KALHDTF+
Sbjct: 74 NAQDATRALELLNFTGVNGKPIRIMFSHRDPSIRKSGTANIFIKNLDKSIDNKALHDTFA 133
Query: 140 SFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER 199
+FGNILSCK+ATD SGQSKG+GFVQFE +ESAQNAI+K+NGML+NDKQVFVG F+R+QER
Sbjct: 134 AFGNILSCKVATDASGQSKGYGFVQFEQEESAQNAIEKVNGMLLNDKQVFVGPFVRRQER 193
Query: 200 ETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ +KFNNV+VKNL + TTD++LKK+FG +G I+SAVVMRD DGKSKCFGFVNFE+
Sbjct: 194 DQAGGVSKFNNVYVKNLADVTTDDELKKVFGAWGPISSAVVMRDNDGKSKCFGFVNFEHP 253
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
DDAAKAVEAL GKKFD++EWYVG+AQKKSERE EL+ +FEQ KE ++K+QG+NLY+KNL
Sbjct: 254 DDAAKAVEALQGKKFDEKEWYVGRAQKKSEREAELRAKFEQERKERIEKYQGVNLYLKNL 313
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D++DDEK++ELF+E+GTITSCKVMRD G SKGSGFVAFS+P+EA+RA+ EMNGKM+ +
Sbjct: 314 DDTVDDEKIRELFAEYGTITSCKVMRDHQGQSKGSGFVAFSSPDEATRAVTEMNGKMVGN 373
Query: 380 KPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQF-LYGQAPP 438
KPLYVA+AQRKEERR RLQA F+QMR +GP+VP +PMY PG G+G Q YGQ PP
Sbjct: 374 KPLYVALAQRKEERRMRLQAAFAQMR-THVGPAVPTSLPMYHPGAPGMGPQMSYYGQHPP 432
Query: 439 AIIPPQM 445
IP Q+
Sbjct: 433 GPIPLQV 439
>gi|224062834|ref|XP_002300896.1| predicted protein [Populus trichocarpa]
gi|222842622|gb|EEE80169.1| predicted protein [Populus trichocarpa]
Length = 648
Score = 643 bits (1659), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/624 (54%), Positives = 427/624 (68%), Gaps = 64/624 (10%)
Query: 26 QFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAA 85
QF SLYVGDL+ NV + QL+DLFSQV V+S RVCRD + SLGY YVN++NP DAA
Sbjct: 29 QFPNRSLYVGDLEHNVKEGQLFDLFSQVAPVVSTRVCRDQAGLTSLGYAYVNFSNPQDAA 88
Query: 86 RALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNIL 145
+A++VLNFTPLN K IRIM+SHRDP+ R+SG N+FIKNLD ID+KAL++TF+SFG +L
Sbjct: 89 KAMEVLNFTPLNGKPIRIMFSHRDPTTRRSGHANVFIKNLDTKIDNKALYETFASFGPVL 148
Query: 146 SCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIK 205
SCK+A D +GQSKG+GF+QFEN+E AQ+AI++LNGML+ND++V+VG F+R+ ER
Sbjct: 149 SCKVAVDNNGQSKGYGFIQFENEEDAQSAINRLNGMLVNDREVYVGPFVRRLERIEANGS 208
Query: 206 TKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKA 265
KF NV+VKNL E+T+DEDLKKIF YG ITSA+VM+D +GKS+ FGFVNF++ D AA A
Sbjct: 209 PKFTNVYVKNLSETTSDEDLKKIFSSYGAITSAIVMKDQNGKSRGFGFVNFQSPDSAAAA 268
Query: 266 VEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDD 325
VE LNG F D+ WYVG+AQ+K ERE ELK +FEQ +K + NLY+KNLGD+ID+
Sbjct: 269 VEKLNGMTFSDKVWYVGRAQRKGEREAELKAKFEQERNSRYEKMKAANLYLKNLGDTIDE 328
Query: 326 EKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVA 385
E+LKELFSEFG+ITSCKVM D G+SKGSGFVAFSTPEEASRAL+EMNGKMI KPLYVA
Sbjct: 329 ERLKELFSEFGSITSCKVMLDQQGLSKGSGFVAFSTPEEASRALSEMNGKMIGKKPLYVA 388
Query: 386 VAQRKEERRARLQAQFSQMRPVAMGPSVPPRMP----------------------MYPPG 423
+AQR+EER ARLQA FSQ++ + P++P +P M PP
Sbjct: 389 IAQRREERMARLQAHFSQIQAPGL-PTLPSGLPGYHPGTPRLAPHQLYFGQGTPGMMPPQ 447
Query: 424 PSGLG--QQFLYGQ----APPAIIPPQM-------------PPRGHAYRYP---LGRNMQ 461
P+G Q L G P ++P Q+ P H L RN
Sbjct: 448 PAGYSFQPQLLPGMRAAVGPNFVMPYQLQRQGQQGQRMGMRPGGNHQQMQQQQLLHRNTN 507
Query: 462 DFPFDMG---------------AGSMLPVPVDM-GAGIPRRDASVGQPMPITALSTALAN 505
+G G ++P+P + G I A P+PI+ L+TALA+
Sbjct: 508 QGVRYVGNARNGIDSSVVPQGFVGPVMPLPFEASGMPITPSHAQPTTPVPISTLTTALAS 567
Query: 506 ASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAME 565
A+PE + +LGE LYPLVE LE D AKVTGMLLEMDQTEVLHL+ESP+ALK KVAEAM+
Sbjct: 568 ATPENRMMMLGEQLYPLVECLEPDHVAKVTGMLLEMDQTEVLHLIESPDALKKKVAEAMQ 627
Query: 566 VLRSVAQQQANNPADQLASLSLNE 589
VL+ A++ DQ SL+LNE
Sbjct: 628 VLQEAG---ASSVGDQPGSLALNE 648
>gi|326511990|dbj|BAJ95976.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 530
Score = 640 bits (1651), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 306/419 (73%), Positives = 356/419 (84%), Gaps = 1/419 (0%)
Query: 19 AAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNY 78
A GA+ TTSLYVGDL+ NVTDSQLY+LFSQ GQV+SVRVCRD+++RRSLGY YVNY
Sbjct: 111 AGGAAQQPLPTTSLYVGDLEANVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNY 170
Query: 79 ANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTF 138
+NP DAARA++ LNF PLNNK IR+MYS+RDPS R+SG+ NIFIKNLDK+ID+K LHDTF
Sbjct: 171 SNPMDAARAMEALNFAPLNNKPIRVMYSNRDPSSRRSGSANIFIKNLDKTIDNKTLHDTF 230
Query: 139 SSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQE 198
S+FG ILSCK+A D GQSKGFGFVQ+E +ESAQ+A+ LNGMLINDK V+VG FLRKQE
Sbjct: 231 SAFGAILSCKVAMDDIGQSKGFGFVQYEKEESAQSAMKSLNGMLINDKPVYVGPFLRKQE 290
Query: 199 RETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFEN 258
R+ + K KFNNVFVKNL ESTT EDL K+F EYGTITSAVVM DGKS+CFGFVNFE+
Sbjct: 291 RDNSSDKAKFNNVFVKNLSESTTKEDLIKVFSEYGTITSAVVMIGMDGKSRCFGFVNFES 350
Query: 259 ADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKN 318
DDAA+AVE LNGKK +D+EWYVG+AQKKSERE +LK +FEQ+MK+ DK+QG NLY+KN
Sbjct: 351 PDDAARAVEELNGKKINDKEWYVGRAQKKSEREMDLKRRFEQSMKDAADKYQGQNLYLKN 410
Query: 319 LGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIV 378
L D I D++L+ELFS FG ITSCK+MRD +G+SKGSGFV+FST EEAS+AL EMNGKMI
Sbjct: 411 LDDGITDDQLRELFSNFGKITSCKIMRDQNGVSKGSGFVSFSTREEASQALTEMNGKMIS 470
Query: 379 SKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAP 437
KPLYVA AQRKEER+A LQAQFSQMRPV M PS+ PR+PMYPP P+ LGQQ YGQAP
Sbjct: 471 GKPLYVAFAQRKEERKAMLQAQFSQMRPVPMTPSMTPRLPMYPPMPT-LGQQLFYGQAP 528
>gi|302811197|ref|XP_002987288.1| hypothetical protein SELMODRAFT_269256 [Selaginella moellendorffii]
gi|302815025|ref|XP_002989195.1| hypothetical protein SELMODRAFT_269487 [Selaginella moellendorffii]
gi|300143095|gb|EFJ09789.1| hypothetical protein SELMODRAFT_269487 [Selaginella moellendorffii]
gi|300144923|gb|EFJ11603.1| hypothetical protein SELMODRAFT_269256 [Selaginella moellendorffii]
Length = 567
Score = 636 bits (1640), Expect = e-179, Method: Compositional matrix adjust.
Identities = 336/586 (57%), Positives = 422/586 (72%), Gaps = 49/586 (8%)
Query: 27 FLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAAR 86
F +T+LYVGDLD +V ++Q++D+F Q+G V+SVR+CRD+ T+RSLGY YVNY N DA+R
Sbjct: 12 FASTALYVGDLDPSVNEAQIFDIFKQIGNVMSVRLCRDMVTKRSLGYAYVNYNNTQDASR 71
Query: 87 ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
A++ LNF P+N K +RIM+S+RDPSIRKSG+GN+F+KNLDKSID+KALHD FS +G ILS
Sbjct: 72 AIEELNFMPVNGKPVRIMFSYRDPSIRKSGSGNLFVKNLDKSIDNKALHDLFSPYGKILS 131
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKT 206
CKIA D S SKG GFVQF+ +++A AI+K+NG ++DKQ+FVG F+R+QER+ A +
Sbjct: 132 CKIALDVSNVSKGHGFVQFDTEDAAHTAIEKINGTTLHDKQLFVGPFVRRQERDPPA--S 189
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
KFNNVFVKNL E TTDEDL+K+FG +G I+SAVVM++ DGKSKCFGFVNFEN +DA KAV
Sbjct: 190 KFNNVFVKNLSEITTDEDLQKLFGVFGPISSAVVMKEVDGKSKCFGFVNFENPEDAVKAV 249
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
E L+G F D+E YV +AQKK+ERE ELK +FE K+T DK NLY+KNL D IDDE
Sbjct: 250 EDLHGTTFQDKELYVSRAQKKNEREAELKAKFEHERKDTEDK-SPTNLYLKNLDDGIDDE 308
Query: 327 KLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 386
KLK++FS FG +TSCKVMRDP G SKGSGFVAFST + A RA+A+MNGKMI SKPLYVA+
Sbjct: 309 KLKDMFSAFGNVTSCKVMRDPLGHSKGSGFVAFSTSDAALRAVAQMNGKMIGSKPLYVAM 368
Query: 387 AQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAI------ 440
AQ+KEER+A+L+AQF+ PV P PP S +GQQ LY + P +
Sbjct: 369 AQKKEERKAKLEAQFASRGPVNFPP---------PPLYSAVGQQLLYSRPAPMVPQQPAG 419
Query: 441 ----------IPPQMPP---RGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRD 487
+P PP +GHA R P + MQ G+ S P
Sbjct: 420 FAMVRPNVGQMPGFFPPQRQQGHA-RVPFQQFMQRESTFHGSNSRTP------------- 465
Query: 488 ASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVL 547
+ G + L++ LA+A+PEQQR +LGE LYPLV+ +E + A K+TGMLLEMDQTEVL
Sbjct: 466 -AYGNNSFLAVLASHLASATPEQQRIMLGEQLYPLVDCIEHNHAGKITGMLLEMDQTEVL 524
Query: 548 HLLESPEALKAKVAEAMEVLRSVAQQQANNPADQLASLSLNENLVS 593
HLLESPEAL KV+EAMEVLR QQ P D LASLSL++ L+S
Sbjct: 525 HLLESPEALNLKVSEAMEVLRD--SQQRLIPPD-LASLSLDDPLMS 567
>gi|449446375|ref|XP_004140947.1| PREDICTED: polyadenylate-binding protein 3-like [Cucumis sativus]
Length = 652
Score = 629 bits (1622), Expect = e-177, Method: Compositional matrix adjust.
Identities = 352/637 (55%), Positives = 441/637 (69%), Gaps = 66/637 (10%)
Query: 15 PNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYG 74
P A A+G FL++SLYVGDLD +V + QL +LF QV QV+S+RVCRD + R+SLGY
Sbjct: 20 PPPTVAVATGGGFLSSSLYVGDLDQSVNEGQLLELFGQVAQVVSIRVCRDQTRRQSLGYA 79
Query: 75 YVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKAL 134
YVN+++ DA A++ LNFTP+N K IRIM S+RDPSIRKSG N+FIKNLD SID+KAL
Sbjct: 80 YVNFSSHQDAVNAMEHLNFTPVNGKPIRIMISNRDPSIRKSGYANVFIKNLDLSIDNKAL 139
Query: 135 HDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFL 194
DTF++FG +LSCK+A D +GQSKG+GFVQFE++ESA+ +I+KLNGML+NDKQV+VGHF+
Sbjct: 140 RDTFAAFGTVLSCKVAVDSNGQSKGYGFVQFESEESAEISIEKLNGMLLNDKQVYVGHFI 199
Query: 195 RKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFV 254
R QER A ++F NV+VKNL E+TTD+DLK +F +GTITSA+VM D +GKSKCFGFV
Sbjct: 200 RHQER-IRANGSQFTNVYVKNLPETTTDDDLKNLFAPHGTITSAIVMTDSNGKSKCFGFV 258
Query: 255 NFENADDAAKAVEALNGKKF-DDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLN 313
NF+N D AA AVE L+G DD+ YVG+AQ+K+ERE ELK +FEQ K +K QG N
Sbjct: 259 NFQNTDSAAAAVEKLDGTVLGDDKTLYVGRAQRKAEREAELKAKFEQERKSRFEKLQGAN 318
Query: 314 LYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMN 373
LYIKNL D IDDEKLKELFSE+GTITSCKVM D G+SKGSGFVAFS+P+EA++AL EMN
Sbjct: 319 LYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQHGLSKGSGFVAFSSPDEATKALNEMN 378
Query: 374 GKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLG-QQFL 432
GKM KPLYVAVAQRKEER+ARLQAQF+Q+R S+P +P + PG + + QQ
Sbjct: 379 GKMKGRKPLYVAVAQRKEERKARLQAQFAQIRAAGGISSLPSGIPGFHPGAARVSPQQMY 438
Query: 433 YGQAPPAIIP---------PQ--------------MP----------PR----------- 448
YGQ P + P PQ MP PR
Sbjct: 439 YGQGNPGLAPPQPAGYGFQPQLMSGMRPGMGPNFLMPYQFQRQGQPGPRLGVRRGGNSQP 498
Query: 449 -----------GHAYRY-PLGRNMQDFP-FDMGAGS-MLPVPVDMGAGI--PRRDASVGQ 492
G ++RY RN + P G S M+P+ D G+G+ P D +
Sbjct: 499 LPQQQLPLRGYGQSFRYMNNARNGLETPVLPQGLVSPMMPLAFD-GSGVSSPPNDIQRSR 557
Query: 493 PMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLES 552
+P + L++ALA+AS E QR +LGE LYPLVE+LE AAKVTGMLLEMDQ EVLHL+ES
Sbjct: 558 AVPTSTLASALASASLENQRVMLGEQLYPLVERLEPSHAAKVTGMLLEMDQPEVLHLIES 617
Query: 553 PEALKAKVAEAMEVLRSVAQQQANNPADQLASLSLNE 589
P+ LK+KVAEAMEVLR + + +DQL +L+L +
Sbjct: 618 PDDLKSKVAEAMEVLRKASSEP--ELSDQLGALTLTK 652
>gi|449494063|ref|XP_004159436.1| PREDICTED: polyadenylate-binding protein 3-like [Cucumis sativus]
Length = 652
Score = 627 bits (1617), Expect = e-177, Method: Compositional matrix adjust.
Identities = 351/637 (55%), Positives = 441/637 (69%), Gaps = 66/637 (10%)
Query: 15 PNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYG 74
P A A+G FL++SLYVGDLD +V + QL +LF QV QV+S+RVCRD + R+SLGY
Sbjct: 20 PPPTVAVATGGGFLSSSLYVGDLDQSVNEGQLLELFGQVAQVVSIRVCRDQTRRQSLGYA 79
Query: 75 YVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKAL 134
YVN+++ DA A++ LNFTP+N K IRIM S+RDPSIRKSG N+FIKNLD SID+KAL
Sbjct: 80 YVNFSSHQDAVNAMEHLNFTPVNGKPIRIMISNRDPSIRKSGYANVFIKNLDLSIDNKAL 139
Query: 135 HDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFL 194
DTF++FG +LSCK+A D +GQSKG+GFVQFE++ESA+ +I+KLNGML+NDKQV+VGHF+
Sbjct: 140 RDTFAAFGTVLSCKVAVDSNGQSKGYGFVQFESEESAEISIEKLNGMLLNDKQVYVGHFI 199
Query: 195 RKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFV 254
R QER A ++F NV+VKNL E+TTD+DLK +F +GTITSA+VM D +GKSKCFGFV
Sbjct: 200 RHQER-IRANGSQFTNVYVKNLPETTTDDDLKNLFAPHGTITSAIVMTDSNGKSKCFGFV 258
Query: 255 NFENADDAAKAVEALNGKKF-DDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLN 313
NF+N D AA AVE L+G DD+ YVG+AQ+K+ERE EL+ +FEQ K +K QG N
Sbjct: 259 NFQNTDSAAAAVEKLDGTVLGDDKTLYVGRAQRKAEREAELRAKFEQERKSRFEKLQGAN 318
Query: 314 LYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMN 373
LYIKNL D IDDEKLKELFSE+GTITSCKVM D G+SKGSGFVAFS+P+EA++AL EMN
Sbjct: 319 LYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQHGLSKGSGFVAFSSPDEATKALNEMN 378
Query: 374 GKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLG-QQFL 432
GKM KPLYVAVAQRKEER+ARLQAQF+Q+R S+P +P + PG + + QQ
Sbjct: 379 GKMKGRKPLYVAVAQRKEERKARLQAQFAQIRAAGGISSLPSGIPGFHPGAARVSPQQMY 438
Query: 433 YGQAPPAIIP---------PQ--------------MP----------PR----------- 448
YGQ P + P PQ MP PR
Sbjct: 439 YGQGNPGLAPPQPAGYGFQPQLMSGMRPGMGPNFLMPYQFQRQGQPGPRSGVRRGGNSQP 498
Query: 449 -----------GHAYRY-PLGRNMQDFP-FDMGAGS-MLPVPVDMGAGI--PRRDASVGQ 492
G ++RY RN + P G S M+P+ D G+G+ P D +
Sbjct: 499 LPQQQLPLRGYGQSFRYMNNARNGLESPVLPQGLVSPMMPLAFD-GSGVSSPPNDIQRSR 557
Query: 493 PMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLES 552
+P + L++ALA+AS E QR +LGE LYPLVE+LE AAKVTGMLLEMDQ EVLHL+ES
Sbjct: 558 AVPTSTLASALASASLENQRVMLGEQLYPLVERLEPSHAAKVTGMLLEMDQPEVLHLIES 617
Query: 553 PEALKAKVAEAMEVLRSVAQQQANNPADQLASLSLNE 589
P+ LK+KVAEAMEVLR + + +DQL +L+L +
Sbjct: 618 PDDLKSKVAEAMEVLRKASSEP--ELSDQLGALTLTK 652
>gi|7673359|gb|AAF66825.1| poly(A)-binding protein [Nicotiana tabacum]
Length = 479
Score = 625 bits (1611), Expect = e-176, Method: Compositional matrix adjust.
Identities = 330/482 (68%), Positives = 368/482 (76%), Gaps = 62/482 (12%)
Query: 171 AQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFG 230
AQ AIDKLNGML+NDKQV+VGHFLRKQERE+ TKF NV+VKNL ESTTD+ LKK+FG
Sbjct: 1 AQGAIDKLNGMLMNDKQVYVGHFLRKQERESTTGMTKFQNVYVKNLSESTTDDGLKKVFG 60
Query: 231 EYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSER 290
E+G ITSAVVMRD DGKSKCFGF+NFE A+DAAKAVE+LNGKKFDD+EWYVGKAQKKSER
Sbjct: 61 EFGNITSAVVMRDADGKSKCFGFINFETAEDAAKAVESLNGKKFDDKEWYVGKAQKKSER 120
Query: 291 EQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGI 350
EQELK +FEQ KE VDK+QGLNLY+KNL D+IDDEKLKELFSEFGTITSCKVMRDPSGI
Sbjct: 121 EQELKSKFEQTAKEAVDKYQGLNLYVKNLDDTIDDEKLKELFSEFGTITSCKVMRDPSGI 180
Query: 351 SKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMG 410
S+GSGFVAFST EEASRAL+EMNGKMIVSKPLYVA+AQRKEERRA+L+AQFSQ+RPVAM
Sbjct: 181 SRGSGFVAFSTSEEASRALSEMNGKMIVSKPLYVALAQRKEERRAKLRAQFSQLRPVAMP 240
Query: 411 PSVPPRMPMYPP-------------GP-------SGLG--QQFLYGQAPPAIIPPQ--MP 446
PS+ PRMP+YPP GP +G G QQ + G P P MP
Sbjct: 241 PSLAPRMPIYPPGAPGIGQQLFYGQGPPAMIPPQAGFGYQQQLVPGMRPGGAPMPNFFMP 300
Query: 447 -----------------------------------PRGHAYRYPLGRNMQDFPFDMGAGS 471
PRG YRYP GRN + P G
Sbjct: 301 LVQQGQQGQRPGGRRGAGPVQQTQQPMPLMQQQMLPRGRMYRYPPGRNGPEGPMPGVPGG 360
Query: 472 MLPVPVDMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAA 531
ML VP DMG +PR D+++GQPMPI+ L++ALANA PEQQRT+LGESLYPLV+QLE + A
Sbjct: 361 MLSVPYDMGGMLPR-DSAMGQPMPISTLASALANAPPEQQRTMLGESLYPLVDQLEHEHA 419
Query: 532 AKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNPADQLASLSLNENL 591
AKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLR+V QQ NPADQLASLSLN+NL
Sbjct: 420 AKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRNV--QQTTNPADQLASLSLNDNL 477
Query: 592 VS 593
VS
Sbjct: 478 VS 479
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/235 (39%), Positives = 134/235 (57%), Gaps = 20/235 (8%)
Query: 84 AARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTG-----NIFIKNLDKSIDHKALHDTF 138
A A+D LN +N+K + + + R R+S TG N+++KNL +S L F
Sbjct: 1 AQGAIDKLNGMLMNDKQVYVGHFLRKQE-RESTTGMTKFQNVYVKNLSESTTDDGLKKVF 59
Query: 139 SSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQE 198
FGNI S + D G+SK FGF+ FE E A A++ LNG +DK+ +VG +K E
Sbjct: 60 GEFGNITSAVVMRDADGKSKCFGFINFETAEDAAKAVESLNGKKFDDKEWYVGKAQKKSE 119
Query: 199 RETVAIKTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGD 245
RE +K+KF N++VKNLD++ DE LK++F E+GTITS VMRD
Sbjct: 120 REQ-ELKSKFEQTAKEAVDKYQGLNLYVKNLDDTIDDEKLKELFSEFGTITSCKVMRDPS 178
Query: 246 GKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQ 300
G S+ GFV F +++A++A+ +NGK + YV AQ+K ER +L+ QF Q
Sbjct: 179 GISRGSGFVAFSTSEEASRALSEMNGKMIVSKPLYVALAQRKEERRAKLRAQFSQ 233
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 104/197 (52%), Gaps = 18/197 (9%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++YV +L + TD L +F + G + S V RD + +S +G++N+ DAA+A++
Sbjct: 40 NVYVKNLSESTTDDGLKKVFGEFGNITSAVVMRD-ADGKSKCFGFINFETAEDAAKAVES 98
Query: 91 LNFTPLNNKSIRIMYSHRDP----------------SIRKSGTGNIFIKNLDKSIDHKAL 134
LN ++K + + + ++ K N+++KNLD +ID + L
Sbjct: 99 LNGKKFDDKEWYVGKAQKKSEREQELKSKFEQTAKEAVDKYQGLNLYVKNLDDTIDDEKL 158
Query: 135 HDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFL 194
+ FS FG I SCK+ D SG S+G GFV F E A A+ ++NG +I K ++V
Sbjct: 159 KELFSEFGTITSCKVMRDPSGISRGSGFVAFSTSEEASRALSEMNGKMIVSKPLYVALAQ 218
Query: 195 RKQERETVAIKTKFNNV 211
RK+ER ++ +F+ +
Sbjct: 219 RKEERR-AKLRAQFSQL 234
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
+++ +LYV +LD + D +L +LFS+ G + S +V RD S S G G+V ++ +A
Sbjct: 137 DKYQGLNLYVKNLDDTIDDEKLKELFSEFGTITSCKVMRDPSG-ISRGSGFVAFSTSEEA 195
Query: 85 ARALDVLNFTPLNNKSIRIMYSHR 108
+RAL +N + +K + + + R
Sbjct: 196 SRALSEMNGKMIVSKPLYVALAQR 219
>gi|356502327|ref|XP_003519971.1| PREDICTED: polyadenylate-binding protein 5-like [Glycine max]
Length = 616
Score = 607 bits (1566), Expect = e-171, Method: Compositional matrix adjust.
Identities = 335/625 (53%), Positives = 420/625 (67%), Gaps = 69/625 (11%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
SGN SLYVGDL+ NV ++QL+ LF++VG + S+RVCRD T RSLGY YVN+ NP
Sbjct: 3 SGN----ASLYVGDLERNVDEAQLFQLFARVGPIFSIRVCRD-ETNRSLGYAYVNFVNPQ 57
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
DAA A++ LNFTPLN KSIR+M+S+RDPSIRKSG N+FIKNLD SID+K LHDTF++FG
Sbjct: 58 DAANAMEHLNFTPLNGKSIRVMFSNRDPSIRKSGYANVFIKNLDISIDNKTLHDTFAAFG 117
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 202
+LS K+A D GQSKG+GFVQF+N+ESAQNAI +LNGMLINDK+V+VG F+ +QER V
Sbjct: 118 FVLSSKVAVDSIGQSKGYGFVQFDNEESAQNAIKELNGMLINDKKVYVGLFVNRQERAQV 177
Query: 203 AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDA 262
KF NV+VKN E+ TDEDL+++F YGTITSAVVM+D DGKS+CFGFVNFE+ D A
Sbjct: 178 DGSPKFTNVYVKNFSETYTDEDLEQLFSTYGTITSAVVMKDTDGKSRCFGFVNFESPDSA 237
Query: 263 AKAVEALNGKKF-DDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGD 321
AVE LNG DD+ YVG+AQ+K+ERE ELK +FE +K+ G NLY+KNL
Sbjct: 238 VAAVERLNGTTVNDDKVLYVGRAQRKAEREAELKARFELERIRKYEKYHGTNLYVKNLDY 297
Query: 322 SIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKP 381
+I+D+KLKELFSEFGTITSCKVM +P+G SKG GFVAFS P A+RAL EMNGKMI +P
Sbjct: 298 NINDDKLKELFSEFGTITSCKVMLEPNGRSKGYGFVAFSAPRNANRALHEMNGKMIGRRP 357
Query: 382 LYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFL-YGQAPPAI 440
LYVAVAQRKEER+A L+AQFSQM + +P +P+Y PG G Q L YGQ P++
Sbjct: 358 LYVAVAQRKEERKALLEAQFSQMHALYAITHLPTGIPVYHPGAPRHGPQALHYGQGAPSL 417
Query: 441 IPPQMPPRGHAYRY-------------------------PLGRNM-----------QDFP 464
+ PQ P G+ ++ P RN+ Q F
Sbjct: 418 VAPQ--PTGYGFQQQLLPGMHPGVAPNFIMPYHRQRQVPPRLRNLHRNQMLHLNSSQGFG 475
Query: 465 FDMGAGS---------------MLPVPVDMGAGI---PRRDASVGQPMPITALSTALANA 506
+ MG G M+P+P D G+GI P + G + T ++ALA+A
Sbjct: 476 Y-MGNGQNGMDPSVVPHGIVAPMMPLPFD-GSGISAAPTYNQHPGGSLSNT-FASALASA 532
Query: 507 SPEQQRTLLGESLYPLVEQLERDA--AAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAM 564
+PE Q +L E LYPLV+++ ++ KVTGMLLEMDQ+EV+HL ESPE LK KV EAM
Sbjct: 533 TPENQHLMLAEHLYPLVDEITKNHHQTEKVTGMLLEMDQSEVIHLTESPEDLKIKVFEAM 592
Query: 565 EVLRSVAQQQANNPADQLASLSLNE 589
+ L A + DQL S+SL E
Sbjct: 593 QALGEAA-PDSEEVGDQLGSVSLKE 616
>gi|297841929|ref|XP_002888846.1| hypothetical protein ARALYDRAFT_339396 [Arabidopsis lyrata subsp.
lyrata]
gi|297334687|gb|EFH65105.1| hypothetical protein ARALYDRAFT_339396 [Arabidopsis lyrata subsp.
lyrata]
Length = 685
Score = 598 bits (1542), Expect = e-168, Method: Compositional matrix adjust.
Identities = 339/633 (53%), Positives = 424/633 (66%), Gaps = 78/633 (12%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
+SLYVGDLD +V + QL DLF+QV V +VRVCRDL TRRSLGY YVN+ANP DA+RA+D
Sbjct: 58 SSLYVGDLDPSVDEPQLLDLFNQVAPVQTVRVCRDL-TRRSLGYAYVNFANPEDASRAMD 116
Query: 90 VLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKI 149
LN+ P+ ++ IRIM S+RDPS R SG GN+FIKNLD SID+KAL++TFS+FG ILSCK+
Sbjct: 117 SLNYAPIRDRPIRIMLSNRDPSTRLSGKGNVFIKNLDPSIDNKALYETFSAFGTILSCKV 176
Query: 150 ATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER---ETVAIKT 206
A D G+SKG+GFVQFE +E+AQ AIDKLNGML+NDKQVFVGHF+R+Q+R E+ A+
Sbjct: 177 AMDAVGRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQVFVGHFVRRQDRSRSESGAV-P 235
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
+F NV+VKNL + TD++LKK FG+YG I+SAVVM+D G S+ FGFVNFE+ + AA AV
Sbjct: 236 RFTNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGNSRSFGFVNFESPEAAAVAV 295
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
E +NG + YVG+AQKKSERE+EL+ +FEQ +K QG NLY+KNL DS++DE
Sbjct: 296 EKMNGISLGEDVLYVGRAQKKSEREEELRRKFEQERISRFEKLQGSNLYLKNLDDSVNDE 355
Query: 327 KLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 386
KLKE+FSE+G +TSCKVM + G+S+G GFVA+S+PEEASRAL+EMNGKMI KPLYVA
Sbjct: 356 KLKEMFSEYGNVTSCKVMMNSQGLSRGFGFVAYSSPEEASRALSEMNGKMIGRKPLYVAF 415
Query: 387 AQRKEERRARLQAQFSQMR-PVAMGPSVPPRMP---MYPPGP--SGLGQQFLY-GQAPPA 439
AQRKEERRA LQ F+ +R P M P +P MP +PPG SG +Y GQ
Sbjct: 416 AQRKEERRAHLQTLFTHIRSPGTMSP-IPSPMPGFHHHPPGGPMSGPHHPTMYIGQNGQG 474
Query: 440 IIPPQMPPRGHAYR-------------------YPLGRNMQDFP---FDMGAGSML---- 473
++PPQ P G+ Y+ +PL R Q P F GA +M
Sbjct: 475 LVPPQ--PMGYGYQVQFMPGVRPGAGPANYMMPFPLQRQTQPGPRVGFRRGANNMQQHFQ 532
Query: 474 ----------PVPVDMGAGIPRR---DASVGQ---PMPITA------------------- 498
P MG RR +AS Q P+P+ A
Sbjct: 533 QQQILQQNASPGMRYMGGAGNRRNGMEASAPQGIIPLPLNASAISHNAPQHPHKPPLLTI 592
Query: 499 --LSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEAL 556
L++ LA A PE+ +LGE+LYPLV Q E + AAKVTGMLLEMDQ E+LHLLESPEAL
Sbjct: 593 SKLASDLALAPPEKHPQMLGENLYPLVAQQEPEYAAKVTGMLLEMDQAEILHLLESPEAL 652
Query: 557 KAKVAEAMEVLRSVAQQQANNPADQLASLSLNE 589
KAKV+EA++VLR A A + D +LS E
Sbjct: 653 KAKVSEALDVLRLSANAPAVSSVDDQFALSSTE 685
>gi|297845300|ref|XP_002890531.1| PAB3 binding protein 3 [Arabidopsis lyrata subsp. lyrata]
gi|297336373|gb|EFH66790.1| PAB3 binding protein 3 [Arabidopsis lyrata subsp. lyrata]
Length = 659
Score = 580 bits (1496), Expect = e-163, Method: Compositional matrix adjust.
Identities = 323/646 (50%), Positives = 410/646 (63%), Gaps = 103/646 (15%)
Query: 2 AQIQVQHQAQMSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRV 61
AQ VQ + P+ A + +SLY GDLD VT++ L+DLF V V+SVRV
Sbjct: 23 AQTSVQVPVSIPAPS--PAAVADQTHPNSSLYAGDLDPKVTEAHLFDLFKHVANVVSVRV 80
Query: 62 CRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIF 121
CRD RRSLGY Y+N++NP DA RA++ LN+TPL + IRIM S+RDPS R SG GNIF
Sbjct: 81 CRD-QNRRSLGYAYINFSNPNDAYRAMEALNYTPLFERPIRIMLSNRDPSTRLSGKGNIF 139
Query: 122 IKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGM 181
IKNLD SID+KAL +TFSSFG ILSCK+A D +G+SKG+GFVQFE +ESAQ AIDKLNGM
Sbjct: 140 IKNLDASIDNKALFETFSSFGTILSCKVAMDVTGRSKGYGFVQFEKEESAQAAIDKLNGM 199
Query: 182 LINDKQVFVGHFLRKQER--ETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAV 239
L+NDKQVFVGHF+R+QER + +F NV+VKNL + +++L+K FG++G I+SAV
Sbjct: 200 LMNDKQVFVGHFIRRQERARDENTPTPRFTNVYVKNLPKEIGEDELRKTFGKFGVISSAV 259
Query: 240 VMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFE 299
VMRD G S+CFGFVNFE + AA AVE +NG D YVG+AQKKSERE+EL+ +FE
Sbjct: 260 VMRDQSGNSRCFGFVNFECTEAAASAVEKMNGISLGDDVLYVGRAQKKSEREEELRRKFE 319
Query: 300 QAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAF 359
Q +K QG NLY+KNL DS+DDEKLKE+FSE+G +TS KVM +P G+S+G GFVA+
Sbjct: 320 QERINRFEKSQGANLYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLNPQGLSRGFGFVAY 379
Query: 360 STPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPM 419
S PEEA RAL+EMNGKMI KPLY+A+AQRKE+RRA LQA FSQ+R
Sbjct: 380 SNPEEALRALSEMNGKMIGKKPLYIALAQRKEDRRAHLQALFSQIR-------------- 425
Query: 420 YPPGP-SGL-----------GQQFLYGQAPPAIIPPQMPPRGHAYR-------------- 453
PGP SG Q GQ +++P Q P G+ ++
Sbjct: 426 -APGPMSGFHHPPGGPMSGPPQHMYVGQNGASLVPSQ--PIGYGFQPQFMPGMRPGSGPG 482
Query: 454 -----YPLGRNMQDFP---FDMGAGSM--------------------------------- 472
YPL R Q P F GA +M
Sbjct: 483 NFVMPYPLQRQPQTGPRMGFRRGATNMQHHIQQQQLMNRNPTPGMRYMNGAGNGRNGMDS 542
Query: 473 ----------LPVPVDMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPL 522
+P+P+D + I + A + +PI+ L+++LA+ASP + +LGE LYPL
Sbjct: 543 SVPQGILPPIMPLPID-ASSISHQKAPL---LPISKLTSSLASASPADRTRMLGEQLYPL 598
Query: 523 VEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLR 568
VE+ E AKVTGMLLEMDQ E+LHL+ESPEALK+KV+EA++VLR
Sbjct: 599 VERHEPLHVAKVTGMLLEMDQAEILHLMESPEALKSKVSEALDVLR 644
>gi|334183839|ref|NP_177322.2| Polyadenylate-binding protein 5 [Arabidopsis thaliana]
gi|334183841|ref|NP_001185373.1| Polyadenylate-binding protein 5 [Arabidopsis thaliana]
gi|322510110|sp|Q05196.3|PABP5_ARATH RecName: Full=Polyadenylate-binding protein 5; Short=PABP-5;
Short=Poly(A)-binding protein 5
gi|332197109|gb|AEE35230.1| Polyadenylate-binding protein 5 [Arabidopsis thaliana]
gi|332197110|gb|AEE35231.1| Polyadenylate-binding protein 5 [Arabidopsis thaliana]
Length = 682
Score = 580 bits (1494), Expect = e-163, Method: Compositional matrix adjust.
Identities = 327/634 (51%), Positives = 418/634 (65%), Gaps = 82/634 (12%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+SLYVGDLD +V +S L DLF+QV V ++RVCRDL T RSLGY YVN+ANP DA+RA+
Sbjct: 58 NSSLYVGDLDPSVNESHLLDLFNQVAPVHNLRVCRDL-THRSLGYAYVNFANPEDASRAM 116
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LN+ P+ ++ IRIM S+RDPS R SG GN+FIKNLD SID+KAL++TFSSFG ILSCK
Sbjct: 117 ESLNYAPIRDRPIRIMLSNRDPSTRLSGKGNVFIKNLDASIDNKALYETFSSFGTILSCK 176
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER---ETVAIK 205
+A D G+SKG+GFVQFE +E+AQ AIDKLNGML+NDKQVFVGHF+R+Q+R E+ A+
Sbjct: 177 VAMDVVGRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQVFVGHFVRRQDRARSESGAVP 236
Query: 206 TKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKA 265
+ F NV+VKNL + TD++LKK FG+YG I+SAVVM+D G S+ FGFVNF + + AA A
Sbjct: 237 S-FTNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGNSRSFGFVNFVSPEAAAVA 295
Query: 266 VEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDD 325
VE +NG + YVG+AQKKS+RE+EL+ +FEQ +K QG NLY+KNL DS++D
Sbjct: 296 VEKMNGISLGEDVLYVGRAQKKSDREEELRRKFEQERISRFEKLQGSNLYLKNLDDSVND 355
Query: 326 EKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVA 385
EKLKE+FSE+G +TSCKVM + G+S+G GFVA+S PEEA A+ EMNGKMI KPLYVA
Sbjct: 356 EKLKEMFSEYGNVTSCKVMMNSQGLSRGFGFVAYSNPEEALLAMKEMNGKMIGRKPLYVA 415
Query: 386 VAQRKEERRARLQAQFSQMR--------PVAM---------GPSVPPRMPMY-------- 420
+AQRKEER+A LQ+ F+Q+R P M GP P PM+
Sbjct: 416 LAQRKEERQAHLQSLFTQIRSPGTMSPVPSPMSGFHHHPPGGPMSGPHHPMFIGHNGQGL 475
Query: 421 -PPGPSGLGQQ--FLYGQAPPAIIPPQMPPRGHAYRYPLGRNMQDFP------------- 464
P P G G Q F+ G P A P M P +PL R Q P
Sbjct: 476 VPSQPMGYGYQVQFMPGMRPGAGPPNFMMP------FPLQRQTQPGPRVGFRRGANNMQQ 529
Query: 465 --------------FDMGAGS------------MLPVPVDMGAG---IPRRDASVGQPMP 495
F GAG+ ++P+P++ A P+R + P+
Sbjct: 530 QFQQQQMLQQNASRFMGGAGNRRNGMEASAPQGIIPLPLNASANSHNAPQR-SHKPTPLT 588
Query: 496 ITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEA 555
I+ L++ LA ASP++ +LG+ LYPLVEQ E AAKVTGMLLEMDQ E+LHLLESPEA
Sbjct: 589 ISKLASDLALASPDKHPRMLGDHLYPLVEQQEPANAAKVTGMLLEMDQAEILHLLESPEA 648
Query: 556 LKAKVAEAMEVLRSVAQQQANNPADQLASLSLNE 589
LKAKV+EA++VLR A A + D +LS +E
Sbjct: 649 LKAKVSEALDVLRRSADPAAVSSVDDQFALSSSE 682
>gi|7239504|gb|AAF43230.1|AC012654_14 Identical to the polyadenylate-binding protein 5 (PAB5) from
Arabidopsis thaliana gb|M97657 [Arabidopsis thaliana]
Length = 668
Score = 579 bits (1493), Expect = e-162, Method: Compositional matrix adjust.
Identities = 327/634 (51%), Positives = 418/634 (65%), Gaps = 82/634 (12%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+SLYVGDLD +V +S L DLF+QV V ++RVCRDL T RSLGY YVN+ANP DA+RA+
Sbjct: 44 NSSLYVGDLDPSVNESHLLDLFNQVAPVHNLRVCRDL-THRSLGYAYVNFANPEDASRAM 102
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LN+ P+ ++ IRIM S+RDPS R SG GN+FIKNLD SID+KAL++TFSSFG ILSCK
Sbjct: 103 ESLNYAPIRDRPIRIMLSNRDPSTRLSGKGNVFIKNLDASIDNKALYETFSSFGTILSCK 162
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER---ETVAIK 205
+A D G+SKG+GFVQFE +E+AQ AIDKLNGML+NDKQVFVGHF+R+Q+R E+ A+
Sbjct: 163 VAMDVVGRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQVFVGHFVRRQDRARSESGAVP 222
Query: 206 TKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKA 265
+ F NV+VKNL + TD++LKK FG+YG I+SAVVM+D G S+ FGFVNF + + AA A
Sbjct: 223 S-FTNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGNSRSFGFVNFVSPEAAAVA 281
Query: 266 VEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDD 325
VE +NG + YVG+AQKKS+RE+EL+ +FEQ +K QG NLY+KNL DS++D
Sbjct: 282 VEKMNGISLGEDVLYVGRAQKKSDREEELRRKFEQERISRFEKLQGSNLYLKNLDDSVND 341
Query: 326 EKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVA 385
EKLKE+FSE+G +TSCKVM + G+S+G GFVA+S PEEA A+ EMNGKMI KPLYVA
Sbjct: 342 EKLKEMFSEYGNVTSCKVMMNSQGLSRGFGFVAYSNPEEALLAMKEMNGKMIGRKPLYVA 401
Query: 386 VAQRKEERRARLQAQFSQMR--------PVAM---------GPSVPPRMPMY-------- 420
+AQRKEER+A LQ+ F+Q+R P M GP P PM+
Sbjct: 402 LAQRKEERQAHLQSLFTQIRSPGTMSPVPSPMSGFHHHPPGGPMSGPHHPMFIGHNGQGL 461
Query: 421 -PPGPSGLGQQ--FLYGQAPPAIIPPQMPPRGHAYRYPLGRNMQDFP------------- 464
P P G G Q F+ G P A P M P +PL R Q P
Sbjct: 462 VPSQPMGYGYQVQFMPGMRPGAGPPNFMMP------FPLQRQTQPGPRVGFRRGANNMQQ 515
Query: 465 --------------FDMGAGS------------MLPVPVDMGAG---IPRRDASVGQPMP 495
F GAG+ ++P+P++ A P+R + P+
Sbjct: 516 QFQQQQMLQQNASRFMGGAGNRRNGMEASAPQGIIPLPLNASANSHNAPQR-SHKPTPLT 574
Query: 496 ITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEA 555
I+ L++ LA ASP++ +LG+ LYPLVEQ E AAKVTGMLLEMDQ E+LHLLESPEA
Sbjct: 575 ISKLASDLALASPDKHPRMLGDHLYPLVEQQEPANAAKVTGMLLEMDQAEILHLLESPEA 634
Query: 556 LKAKVAEAMEVLRSVAQQQANNPADQLASLSLNE 589
LKAKV+EA++VLR A A + D +LS +E
Sbjct: 635 LKAKVSEALDVLRRSADPAAVSSVDDQFALSSSE 668
>gi|166786|gb|AAA32832.1| poly(A)-binding protein [Arabidopsis thaliana]
Length = 668
Score = 577 bits (1487), Expect = e-162, Method: Compositional matrix adjust.
Identities = 326/634 (51%), Positives = 417/634 (65%), Gaps = 82/634 (12%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+SLYVGDLD +V +S L DLF+QV V ++RVCRDL T RSLGY YVN+ANP DA+RA+
Sbjct: 44 NSSLYVGDLDPSVNESHLLDLFNQVAPVHNLRVCRDL-THRSLGYAYVNFANPEDASRAM 102
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LN+ P+ ++ IRIM S+RDPS R SG GN+FIKNLD SID+KAL++TFSSFG ILSCK
Sbjct: 103 ESLNYAPIRDRPIRIMLSNRDPSTRLSGKGNVFIKNLDASIDNKALYETFSSFGTILSCK 162
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER---ETVAIK 205
+A D G+SKG+GFVQFE +E+AQ AIDKLNGML+NDKQVFVGHF+R+Q+R E+ A+
Sbjct: 163 VAMDVVGRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQVFVGHFVRRQDRARSESGAVP 222
Query: 206 TKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKA 265
+ F NV+VKNL + TD++LKK FG+YG I+SAVVM+D G S+ FGFVNF + + AA A
Sbjct: 223 S-FTNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGNSRSFGFVNFVSPEAAAVA 281
Query: 266 VEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDD 325
VE +NG + YVG+AQKKS+RE+EL+ +FEQ +K QG NLY+KNL DS++D
Sbjct: 282 VEKMNGISLGEDVLYVGRAQKKSDREEELRRKFEQERISRFEKLQGSNLYLKNLDDSVND 341
Query: 326 EKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVA 385
EKLKE+FSE+G +TSCKVM + G+S+G GFVA+S PEEA A+ EMNGKMI KPLYVA
Sbjct: 342 EKLKEMFSEYGNVTSCKVMMNSQGLSRGFGFVAYSNPEEALLAMKEMNGKMIGRKPLYVA 401
Query: 386 VAQRKEERRARLQAQFSQMR--------PVAM---------GPSVPPRMPMY-------- 420
+AQRKEER+A LQ+ F+Q+R P M GP P PM+
Sbjct: 402 LAQRKEERQAHLQSLFTQIRSPGTMSPVPSPMSGFHHHPPGGPMSGPHHPMFIGHNGQGL 461
Query: 421 -PPGPSGLGQQ--FLYGQAPPAIIPPQMPPRGHAYRYPLGRNMQDFP------------- 464
P P G G Q F+ G P A P M P +PL R Q P
Sbjct: 462 VPSQPMGYGYQVQFMPGMRPGAGPPNFMMP------FPLQRQTQPGPRVGFRRGANNMQQ 515
Query: 465 --------------FDMGAGS------------MLPVPVDMGAG---IPRRDASVGQPMP 495
F GAG+ ++P+P++ A P+R + P+
Sbjct: 516 QFQQQQMLQQNASRFMGGAGNRRNGMEASAPQGIIPLPLNASANSHNAPQR-SHKPTPLT 574
Query: 496 ITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEA 555
I+ L++ LA ASP++ +LG+ LYPLVEQ E AKVTGMLLEMDQ E+LHLLESPEA
Sbjct: 575 ISKLASDLALASPDKHPRMLGDHLYPLVEQQEPANPAKVTGMLLEMDQAEILHLLESPEA 634
Query: 556 LKAKVAEAMEVLRSVAQQQANNPADQLASLSLNE 589
LKAKV+EA++VLR A A + D +LS +E
Sbjct: 635 LKAKVSEALDVLRRSADPAAVSSVDDQFALSSSE 668
>gi|15219945|ref|NP_173690.1| Polyadenylate-binding protein 3 [Arabidopsis thaliana]
gi|12643628|sp|O64380.1|PABP3_ARATH RecName: Full=Polyadenylate-binding protein 3; Short=PABP-3;
Short=Poly(A)-binding protein 3
gi|2505869|emb|CAA72907.1| polyA binding protein PAB3 [Arabidopsis thaliana]
gi|15450820|gb|AAK96681.1| Strong similarity to poly(A)-binding protein (PABP5) [Arabidopsis
thaliana]
gi|332192163|gb|AEE30284.1| Polyadenylate-binding protein 3 [Arabidopsis thaliana]
Length = 660
Score = 574 bits (1479), Expect = e-161, Method: Compositional matrix adjust.
Identities = 319/602 (52%), Positives = 399/602 (66%), Gaps = 69/602 (11%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
+SLY GDLD VT++ L+DLF V V+SVRVCRD RRSLGY Y+N++NP DA RA++
Sbjct: 49 SSLYAGDLDPKVTEAHLFDLFKHVANVVSVRVCRD-QNRRSLGYAYINFSNPNDAYRAME 107
Query: 90 VLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKI 149
LN+TPL ++ IRIM S+RDPS R SG GNIFIKNLD SID+KAL +TFSSFG ILSCK+
Sbjct: 108 ALNYTPLFDRPIRIMLSNRDPSTRLSGKGNIFIKNLDASIDNKALFETFSSFGTILSCKV 167
Query: 150 ATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER--ETVAIKTK 207
A D +G+SKG+GFVQFE +ESAQ AIDKLNGML+NDKQVFVGHF+R+QER + +
Sbjct: 168 AMDVTGRSKGYGFVQFEKEESAQAAIDKLNGMLMNDKQVFVGHFIRRQERARDENTPTPR 227
Query: 208 FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVE 267
F NV+VKNL + +++L+K FG++G I+SAVVMRD G S+CFGFVNFE + AA AVE
Sbjct: 228 FTNVYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQSGNSRCFGFVNFECTEAAASAVE 287
Query: 268 ALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEK 327
+NG D YVG+AQKKSERE+EL+ +FEQ +K QG NLY+KNL DS+DDEK
Sbjct: 288 KMNGISLGDDVLYVGRAQKKSEREEELRRKFEQERINRFEKSQGANLYLKNLDDSVDDEK 347
Query: 328 LKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 387
LKE+FSE+G +TS KVM +P G+S+G GFVA+S PEEA RAL+EMNGKMI KPLY+A+A
Sbjct: 348 LKEMFSEYGNVTSSKVMLNPQGMSRGFGFVAYSNPEEALRALSEMNGKMIGRKPLYIALA 407
Query: 388 QRKEERRARLQAQFSQMRPVAMGP-----------SVPPRMPMY---------PPGPSGL 427
QRKE+RRA LQA FSQ+R A GP P MY P P G
Sbjct: 408 QRKEDRRAHLQALFSQIR--APGPMSGFHHPPGGPMPGPPQHMYVGQNGASMVPSQPIGY 465
Query: 428 G--QQFLYGQAPPA-----IIP------PQMPPR-----------------GHAYRYPL- 456
G QF+ G P + I+P PQ PR +R P
Sbjct: 466 GFQPQFMPGMRPGSGPGNFIVPYPLQRQPQTGPRMGFRRGATNVQQHIQQQQLMHRNPSP 525
Query: 457 ----------GRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALSTALANA 506
GRN D G + + I + A + +PI+ L+++LA+A
Sbjct: 526 GMRYMNGASNGRNGMDSSVPQGILPPIIPLPIDASSISHQKAPL---LPISKLTSSLASA 582
Query: 507 SPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEV 566
SP + +LGE LYPLVE+ E AKVTGMLLEMDQ E+LHL+ESPEALK+KV+EA++V
Sbjct: 583 SPADRTRMLGEQLYPLVERHEPLHVAKVTGMLLEMDQAEILHLMESPEALKSKVSEALDV 642
Query: 567 LR 568
LR
Sbjct: 643 LR 644
>gi|9930616|gb|AAG02117.1|AF293840_1 poly(A) binding protein [Arabidopsis thaliana]
Length = 660
Score = 574 bits (1479), Expect = e-161, Method: Compositional matrix adjust.
Identities = 319/602 (52%), Positives = 399/602 (66%), Gaps = 69/602 (11%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
+SLY GDLD VT++ L+DLF V V+SVRVCRD RRSLGY Y+N++NP DA RA++
Sbjct: 49 SSLYAGDLDPKVTEAHLFDLFKHVANVVSVRVCRD-QNRRSLGYAYINFSNPNDAYRAME 107
Query: 90 VLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKI 149
LN+TPL ++ IRIM S+RDPS R SG GNIFIKNLD SID+KAL +TFSSFG ILSCK+
Sbjct: 108 ALNYTPLFDRPIRIMLSNRDPSTRLSGKGNIFIKNLDASIDNKALFETFSSFGTILSCKV 167
Query: 150 ATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER--ETVAIKTK 207
A D +G+SKG+GFVQFE +ESAQ AIDKLNGML+NDKQVFVGHF+R+QER + +
Sbjct: 168 AMDVTGRSKGYGFVQFEKEESAQAAIDKLNGMLMNDKQVFVGHFIRRQERARDENTPTPR 227
Query: 208 FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVE 267
F NV+VKNL + +++L+K FG++G I+SAVVMRD G S+CFGFVNFE + AA AVE
Sbjct: 228 FTNVYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQSGNSRCFGFVNFECTEAAASAVE 287
Query: 268 ALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEK 327
+NG D YVG+AQKKSERE+EL+ +FEQ +K QG NLY+KNL DS+DDEK
Sbjct: 288 KMNGISLGDDVLYVGRAQKKSEREEELRRKFEQERINRFEKSQGANLYLKNLDDSVDDEK 347
Query: 328 LKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 387
LKE+FSE+G +TS KVM +P G+S+G GFVA+S PEEA RAL+EMNGKMI KPLY+A+A
Sbjct: 348 LKEMFSEYGNVTSSKVMLNPQGMSRGFGFVAYSNPEEALRALSEMNGKMIGRKPLYIALA 407
Query: 388 QRKEERRARLQAQFSQMRPVAMGP-----------SVPPRMPMY---------PPGPSGL 427
QRKE+RRA LQA FSQ+R A GP P MY P P G
Sbjct: 408 QRKEDRRAHLQALFSQIR--APGPMSGFHHPPGGPMPGPPQHMYVGQNGASMVPSQPIGY 465
Query: 428 G--QQFLYGQAPPA-----IIP------PQMPPR-----------------GHAYRYPL- 456
G QF+ G P + I+P PQ PR +R P
Sbjct: 466 GFQPQFMPGMRPGSGPGNFIVPYSLQRQPQTGPRMGFRRGATNVQQHIQQQQLMHRNPSP 525
Query: 457 ----------GRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALSTALANA 506
GRN D G + + I + A + +PI+ L+++LA+A
Sbjct: 526 GMRYMNGASNGRNGMDSSVPQGILPPIIPLPIDASSISHQKAPL---LPISKLTSSLASA 582
Query: 507 SPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEV 566
SP + +LGE LYPLVE+ E AKVTGMLLEMDQ E+LHL+ESPEALK+KV+EA++V
Sbjct: 583 SPADRTRMLGEQLYPLVERHEPLHVAKVTGMLLEMDQAEILHLMESPEALKSKVSEALDV 642
Query: 567 LR 568
LR
Sbjct: 643 LR 644
>gi|413918857|gb|AFW58789.1| hypothetical protein ZEAMMB73_983608 [Zea mays]
Length = 412
Score = 569 bits (1466), Expect = e-159, Method: Compositional matrix adjust.
Identities = 281/395 (71%), Positives = 329/395 (83%), Gaps = 4/395 (1%)
Query: 15 PNGVAAGASG--NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLG 72
P V+ GA G TTSLYVGDL+ V+DSQLY+LFSQ GQV+SVRVCRD+++RRSLG
Sbjct: 17 PAVVSPGAVGVAQPLPTTSLYVGDLEGAVSDSQLYELFSQAGQVVSVRVCRDVTSRRSLG 76
Query: 73 YGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHK 132
Y YVNY+NP DAARAL+VLNF LNNK IR+MYS+RDPS R+SG+ NIFIKNLDK+ID+K
Sbjct: 77 YAYVNYSNPLDAARALEVLNFAALNNKPIRVMYSNRDPSSRRSGSANIFIKNLDKTIDNK 136
Query: 133 ALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGH 192
LH+TFSSFG ILSCK+A D +GQSKGFGFVQ++ +E+AQNAI LNGMLINDK VFVG
Sbjct: 137 TLHETFSSFGTILSCKVAVDEAGQSKGFGFVQYDKEEAAQNAIKSLNGMLINDKPVFVGP 196
Query: 193 FLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFG 252
F+RKQER+ KTKFNNVFVKNL ESTT EDL KIFGEYG ITSAVVM DGKS+CFG
Sbjct: 197 FVRKQERDHSFDKTKFNNVFVKNLSESTTKEDLLKIFGEYGDITSAVVMIGMDGKSRCFG 256
Query: 253 FVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGL 312
F+NFEN D A+ AV+ LNGKK +D+EWYVG+AQKKSERE ELK +FEQ++K+ DK+QGL
Sbjct: 257 FINFENPDAASHAVQELNGKKINDKEWYVGRAQKKSEREMELKRRFEQSLKDAADKYQGL 316
Query: 313 NLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEM 372
NLY+KNL DSI D++L ELFS FG ITS KVMRD +G+SKGSGFVAFST EEAS+AL EM
Sbjct: 317 NLYLKNLDDSIGDDQLCELFSNFGKITSYKVMRDQNGLSKGSGFVAFSTREEASQALTEM 376
Query: 373 NGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPV 407
NGKMI KPLYVA AQRKE+R+A LQ + ++PV
Sbjct: 377 NGKMISGKPLYVAFAQRKEDRKAMLQV--TVLKPV 409
>gi|3287682|gb|AAC25510.1| Strong similarity to gb|M97657 poly(A)-binding protein (PABP5) from
A. thaliana [Arabidopsis thaliana]
Length = 655
Score = 564 bits (1454), Expect = e-158, Method: Compositional matrix adjust.
Identities = 320/623 (51%), Positives = 403/623 (64%), Gaps = 62/623 (9%)
Query: 2 AQIQVQHQAQMSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRV 61
AQ VQ + P+ V + +SLY GDLD VT++ L+DLF V V+SVRV
Sbjct: 23 AQTSVQVPVSIPLPSPVVVADQTHP--NSSLYAGDLDPKVTEAHLFDLFKHVANVVSVRV 80
Query: 62 CRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIF 121
CRD RRSLGY Y+N++NP DA RA++ LN+TPL ++ IRIM S+RDPS R SG GNIF
Sbjct: 81 CRD-QNRRSLGYAYINFSNPNDAYRAMEALNYTPLFDRPIRIMLSNRDPSTRLSGKGNIF 139
Query: 122 IKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGM 181
IKNLD SID+KAL +TFSSFG ILSCK+A D +G+SKG+GFVQFE +ESAQ AIDKLNGM
Sbjct: 140 IKNLDASIDNKALFETFSSFGTILSCKVAMDVTGRSKGYGFVQFEKEESAQAAIDKLNGM 199
Query: 182 LINDKQVFVGHFLRKQER--ETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAV 239
L+NDKQVFVGHF+R+QER + +F NV+VKNL + +++L+K FG++G I+SAV
Sbjct: 200 LMNDKQVFVGHFIRRQERARDENTPTPRFTNVYVKNLPKEIGEDELRKTFGKFGVISSAV 259
Query: 240 VMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFE 299
VMRD G S+CFGFVNFE + AA AVE +NG D YVG+AQKKSERE+EL+ +FE
Sbjct: 260 VMRDQSGNSRCFGFVNFECTEAAASAVEKMNGISLGDDVLYVGRAQKKSEREEELRRKFE 319
Query: 300 QAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAF 359
Q +K QG NLY+KNL DS+DDEKLKE+FSE+G +TS KVM +P G+S+G GFVA+
Sbjct: 320 QERINRFEKSQGANLYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLNPQGMSRGFGFVAY 379
Query: 360 STPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQ----FSQMRPVAMGPSVPP 415
S PEEA RAL+EMNGKMI KPLY+A+AQRKE+RRA LQ + S GP P
Sbjct: 380 SNPEEALRALSEMNGKMIGRKPLYIALAQRKEDRRAHLQIRAPGPMSGFHHPPGGPMPGP 439
Query: 416 RMPMY---------PPGPSGLG--QQFLYGQAPPA-----IIP------PQMPPR----- 448
MY P P G G QF+ G P + I+P PQ PR
Sbjct: 440 PQHMYVGQNGASMVPSQPIGYGFQPQFMPGMRPGSGPGNFIVPYPLQRQPQTGPRMGFRR 499
Query: 449 ------------GHAYRYPL-----------GRNMQDFPFDMGAGSMLPVPVDMGAGIPR 485
+R P GRN D G + + I
Sbjct: 500 GATNVQQHIQQQQLMHRNPSPGMRYMNGASNGRNGMDSSVPQGILPPIIPLPIDASSISH 559
Query: 486 RDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTE 545
+ A + +PI+ L+++LA+ASP + +LGE LYPLVE+ E AKVTGMLLEMDQ E
Sbjct: 560 QKAPL---LPISKLTSSLASASPADRTRMLGEQLYPLVERHEPLHVAKVTGMLLEMDQAE 616
Query: 546 VLHLLESPEALKAKVAEAMEVLR 568
+LHL+ESPEALK+KV+EA++VLR
Sbjct: 617 ILHLMESPEALKSKVSEALDVLR 639
>gi|451798952|gb|AGF69179.1| polyadenylate-binding protein 2-like protein, partial [Triticum
aestivum]
Length = 497
Score = 563 bits (1450), Expect = e-157, Method: Compositional matrix adjust.
Identities = 305/501 (60%), Positives = 354/501 (70%), Gaps = 68/501 (13%)
Query: 108 RDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFEN 167
RDPS R+SG+ NIFIKNLDK+ID+K LHDTFS+FG ILSCK+A D GQSKGFGFVQ+E
Sbjct: 1 RDPSSRRSGSANIFIKNLDKTIDNKTLHDTFSAFGAILSCKVAMDDIGQSKGFGFVQYEK 60
Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
+ESAQ+A+ LNGMLINDK V+VG FLRKQER+ K KFNNVFVKNL ESTT +DL K
Sbjct: 61 EESAQSAMKSLNGMLINDKPVYVGPFLRKQERDNSFDKAKFNNVFVKNLSESTTKDDLVK 120
Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
+F YGTITSAVVM DGKS+CF FVNFE+ DDAA+AVE LNGKK +D+EWYVG+AQKK
Sbjct: 121 VFSGYGTITSAVVMIGMDGKSRCFDFVNFESPDDAARAVEELNGKKINDKEWYVGRAQKK 180
Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
SERE +LK +FEQ+MK+ DK+QG NLY+KNL D I D++L+ELFS FG ITSCK+MRD
Sbjct: 181 SEREMDLKRRFEQSMKDAADKYQGQNLYLKNLDDGITDDQLRELFSNFGKITSCKIMRDQ 240
Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPV 407
+G+SKGSGFV+FST EEAS+AL EMNGKMI KPLYVA AQRKE+R+A LQAQFSQMRPV
Sbjct: 241 NGVSKGSGFVSFSTREEASQALTEMNGKMISGKPLYVAFAQRKEDRKAMLQAQFSQMRPV 300
Query: 408 AMGPSVPPRMPMYPPGPSGLGQQFLYGQAP------------------------------ 437
M PS+ PR+PMYPP P+ LGQQ YGQAP
Sbjct: 301 PMTPSMTPRLPMYPPMPT-LGQQLFYGQAPPAMMPPQPGYGFQQQLVPGMRPGGGAHMPN 359
Query: 438 ---PAIIPPQMPPR---------------------------GHAYRYPLG-RNM---QDF 463
P + P Q PR G YRYP G R+M Q
Sbjct: 360 YFVPVVQPGQQGPRPGIRRNGPGSAQGQQTPQPFQQQMVPRGCVYRYPPGPRHMPEVQQM 419
Query: 464 PFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLV 523
P +G G M+ P DMG+ P RDA V PI L++ALANA+PEQQRT+LGESLYPLV
Sbjct: 420 P-GVGVGGMV-QPYDMGS-FPVRDAGVSPAPPIGTLTSALANATPEQQRTILGESLYPLV 476
Query: 524 EQLERDAAAKVTGMLLEMDQT 544
E+LE AAKVTGMLLEMDQT
Sbjct: 477 EKLEHQQAAKVTGMLLEMDQT 497
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 100/288 (34%), Positives = 159/288 (55%), Gaps = 17/288 (5%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ ++++ +LD + + L+D FS G +LS +V D +S G+G+V Y A A+
Sbjct: 10 SANIFIKNLDKTIDNKTLHDTFSAFGAILSCKVAMD-DIGQSKGFGFVQYEKEESAQSAM 68
Query: 89 DVLNFTPLNNKSIRI----MYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNI 144
LN +N+K + + RD S K+ N+F+KNL +S L FS +G I
Sbjct: 69 KSLNGMLINDKPVYVGPFLRKQERDNSFDKAKFNNVFVKNLSESTTKDDLVKVFSGYGTI 128
Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET--- 201
S + G+S+ F FV FE+ + A A+++LNG INDK+ +VG +K ERE
Sbjct: 129 TSAVVMIGMDGKSRCFDFVNFESPDDAARAVEELNGKKINDKEWYVGRAQKKSEREMDLK 188
Query: 202 ---------VAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFG 252
A K + N+++KNLD+ TD+ L+++F +G ITS +MRD +G SK G
Sbjct: 189 RRFEQSMKDAADKYQGQNLYLKNLDDGITDDQLRELFSNFGKITSCKIMRDQNGVSKGSG 248
Query: 253 FVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQ 300
FV+F ++A++A+ +NGK + YV AQ+K +R+ L+ QF Q
Sbjct: 249 FVSFSTREEASQALTEMNGKMISGKPLYVAFAQRKEDRKAMLQAQFSQ 296
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
+ +++ +LY+ +LD +TD QL +LFS G++ S ++ RD S G G+V+++
Sbjct: 198 AADKYQGQNLYLKNLDDGITDDQLRELFSNFGKITSCKIMRD-QNGVSKGSGFVSFSTRE 256
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHR 108
+A++AL +N ++ K + + ++ R
Sbjct: 257 EASQALTEMNGKMISGKPLYVAFAQR 282
>gi|358346231|ref|XP_003637173.1| Polyadenylate-binding protein [Medicago truncatula]
gi|355503108|gb|AES84311.1| Polyadenylate-binding protein [Medicago truncatula]
Length = 622
Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust.
Identities = 310/611 (50%), Positives = 390/611 (63%), Gaps = 69/611 (11%)
Query: 19 AAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNY 78
AA S +F +SLYVGDL NV D+QLYDLFSQ+ V+SVRVCRD T+ SLGYGYVNY
Sbjct: 14 AALTSAGRFENSSLYVGDLQGNVNDAQLYDLFSQIAPVISVRVCRDQMTQSSLGYGYVNY 73
Query: 79 ANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTF 138
+N DAA A++ LN+ PLN K IRIM+SHRDP IRK+G N+FIKNL+ SID+KALH+TF
Sbjct: 74 SNARDAANAMENLNYVPLNGKPIRIMFSHRDPLIRKTGFANLFIKNLETSIDNKALHETF 133
Query: 139 SSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQE 198
S FGN+LSCK+A D +G SKG GFVQF+N +SA+NAI+KL+G L+NDK+V+VG+F+R QE
Sbjct: 134 SVFGNVLSCKVAMDSNGHSKGHGFVQFDNDQSAKNAIEKLDGRLMNDKKVYVGYFVRCQE 193
Query: 199 RETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFEN 258
R + KF NV+VKNL ES T+EDLK++F +G ITS +M+D +G SK FGFVNF++
Sbjct: 194 RSS----PKFTNVYVKNLSESYTNEDLKQLFNTFGVITSVKIMKDENGNSKRFGFVNFQS 249
Query: 259 ADDAAKAVEALNGKKFDD-REWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIK 317
+D AA AVE LNG +D + +VG+AQKKSERE ELK FEQ + +KFQG NLY+K
Sbjct: 250 SDSAATAVEKLNGSTTNDGKVLFVGRAQKKSEREAELKAFFEQEKLKRYEKFQGANLYLK 309
Query: 318 NLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMI 377
N+ S+++EKLKELFSEFGTITSCKVM D G SKG GFVAF+TPEEAS+A+ EMNGK+I
Sbjct: 310 NIDKSLNEEKLKELFSEFGTITSCKVMSDARGRSKGVGFVAFTTPEEASKAIDEMNGKII 369
Query: 378 VSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAP 437
KP+YV+VAQRKEER+A+LQA F ++ + P QQF Y Q
Sbjct: 370 GQKPVYVSVAQRKEERKAQLQAHFPAIQVSGGNAGYHSSVQRLAP------QQFYYEQGT 423
Query: 438 PAIIPPQMPPRGHAYR-----------------YPLGRNMQDFPFD-MG---AGSMLPVP 476
++ PQ P G+ +R P Q P + MG AG+ V
Sbjct: 424 FDLMAPQ--PNGYGFRPKFMSDVGPGFVTPNYLLPYHLQRQGHPGNRMGGRPAGNFQQVR 481
Query: 477 VDMGAGIPRR-------------------DASVGQPMPITALSTALANASP--------- 508
+PR + + P A ST + P
Sbjct: 482 QKKNQMLPRNPNQGLKYNGQNGVGMSVDPGSQLMDPSASAATSTGNHHHGPLSNNSLASA 541
Query: 509 ------EQQRTLLGESLYPLVEQLERDA-AAKVTGMLLEMDQTEVLHLLESPEALKAKVA 561
E Q +L E L+PLV +L AKVT MLLEMDQ+EV+HL+ESPE LK KVA
Sbjct: 542 LASASQENQHRMLEEHLHPLVGRLAPTIQTAKVTRMLLEMDQSEVIHLIESPEELKMKVA 601
Query: 562 EAMEVLRSVAQ 572
EAM LR +Q
Sbjct: 602 EAMRFLRDASQ 612
>gi|302755232|ref|XP_002961040.1| hypothetical protein SELMODRAFT_74731 [Selaginella moellendorffii]
gi|300171979|gb|EFJ38579.1| hypothetical protein SELMODRAFT_74731 [Selaginella moellendorffii]
Length = 625
Score = 528 bits (1361), Expect = e-147, Method: Compositional matrix adjust.
Identities = 297/581 (51%), Positives = 382/581 (65%), Gaps = 53/581 (9%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
SLYVGDLD V ++QL+ +FSQ+G V SVRVCRD TRRSLGYGYVNY++ ADA RA++
Sbjct: 37 VSLYVGDLDETVAETQLFTIFSQMGLVTSVRVCRDAVTRRSLGYGYVNYSSGADAVRAME 96
Query: 90 VLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKI 149
LN+TP+N K+IRIM+SHRDPS RKSG GNIFIKNLD+SID+KALHDTF +FG ILSCKI
Sbjct: 97 ALNYTPINGKTIRIMWSHRDPSTRKSGVGNIFIKNLDESIDNKALHDTFIAFGPILSCKI 156
Query: 150 ATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFN 209
A G+SKG+GFV FE E+A AI+K+NGM + K+VFV F+++ +R +TKF
Sbjct: 157 AHQ-DGRSKGYGFVHFETDEAANLAIEKVNGMQLVGKKVFVAKFVKRSDRLAATGETKFT 215
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEAL 269
NVFVKNLD +E++ + F +G IT+ V+M+D + KSK FGFVNF++ + A AVE +
Sbjct: 216 NVFVKNLDPEMAEEEINEHFSTFGVITNVVIMKDENDKSKGFGFVNFDDPEAARAAVETM 275
Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLK 329
N + R YVG+AQKK+EREQ L+ QFE+ E K+QG NLY+KNL DSIDDE LK
Sbjct: 276 NNSQLGSRTIYVGRAQKKAEREQILRRQFEEKRMEQFQKYQGANLYVKNLDDSIDDETLK 335
Query: 330 ELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQR 389
+ FS +G ITS KVMRD GISKG GFV F++PEEASRA E NG MI KP+YVA+AQR
Sbjct: 336 QEFSRYGNITSAKVMRDEKGISKGFGFVCFTSPEEASRAATETNGLMINGKPIYVAMAQR 395
Query: 390 KEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPPQMPPR- 448
KE R+A+LQ Q++Q M P YPP +Y APPA++ PQ+P R
Sbjct: 396 KEIRQAQLQQQYAQRMSGLMPPPGAQVAAAYPP---------VYYAAPPALL-PQVPQRQ 445
Query: 449 GHAYR-------------------------YPLGRNMQDFPFDMGA---GSMLPVPVD-- 478
G Y+ Y L RN + P + + G M P
Sbjct: 446 GLMYQPVMRPGWRTGPLAPPGRPSLQPLPPYALVRNKKGVPLSISSYIVGVMQQRPRQAM 505
Query: 479 --MGAGIPRRDASVGQP-------MPITA--LSTALANASPEQQRTLLGESLYPLVEQLE 527
+ G PR A+ G P MP+ + + ++ ASP+QQ+ LLGE L+PLV +
Sbjct: 506 KYVNNGRPRDGAAAGGPVLMVPGNMPMGGNDVLSMMSAASPQQQKQLLGERLFPLVRTHQ 565
Query: 528 RDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLR 568
D A K+TGMLLEMD +E+L LLE+PEAL +KV EA++VL+
Sbjct: 566 FDLAGKITGMLLEMDNSELLVLLETPEALASKVDEAVQVLQ 606
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 311 GLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP-SGISKGSGFVAFSTPEEASRAL 369
G++LY+ +L +++ + +L +FS+ G +TS +V RD + S G G+V +S+ +A RA+
Sbjct: 36 GVSLYVGDLDETVAETQLFTIFSQMGLVTSVRVCRDAVTRRSLGYGYVNYSSGADAVRAM 95
Query: 370 AEMNGKMIVSKPLYVAVAQRKEERR 394
+N I K + + + R R
Sbjct: 96 EALNYTPINGKTIRIMWSHRDPSTR 120
>gi|145349140|ref|XP_001418998.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579228|gb|ABO97291.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 572
Score = 528 bits (1360), Expect = e-147, Method: Compositional matrix adjust.
Identities = 252/411 (61%), Positives = 316/411 (76%), Gaps = 4/411 (0%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
T+SLYVGDL+ +VT++QLY+ FS +G V+S+RVCRDL TRRSLGY YVN+ +P DAA A+
Sbjct: 36 TSSLYVGDLETSVTEAQLYEKFSSIGPVVSIRVCRDLITRRSLGYAYVNFQSPNDAAHAI 95
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
DVLNF +N K IR++YS RDP++R+SG GNIFIKNLDK+ID+KAL DTF+ FG I S K
Sbjct: 96 DVLNFQVINGKPIRVLYSQRDPAVRRSGVGNIFIKNLDKAIDNKALLDTFAQFGTITSAK 155
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKF 208
+A DG G SKG+GFVQFE +E+AQ AID +NGM +NDKQV+VG F R+ ER + KF
Sbjct: 156 VAMDGQGNSKGYGFVQFETQEAAQAAIDNVNGMELNDKQVYVGPFQRRAERSNTG-EAKF 214
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NNV+VKNL E+ +DE L++ F E+G +TS V+MRD +GKSK FGFV +E + AA AVE
Sbjct: 215 NNVYVKNLSENLSDEKLREKFAEHGAVTSCVIMRDEEGKSKGFGFVCYEEPEGAAAAVEK 274
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
L+G D++ W V +AQKK+ERE ELK +F+Q +E ++K G NLYIKNL D DDEKL
Sbjct: 275 LDGYTEDEKTWVVCRAQKKAEREAELKAKFDQERRERMEKMAGANLYIKNLEDGTDDEKL 334
Query: 329 KELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
+ELF EFGTITSC+VMRD SG+S+GS FVAFS+P+EA+RA+ EMNGKM+ +KPLYVA+AQ
Sbjct: 335 RELFKEFGTITSCRVMRDASGVSRGSAFVAFSSPDEATRAVTEMNGKMVGAKPLYVALAQ 394
Query: 389 RKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPA 439
RKEERR RLQAQF+Q P G +P M Y P P G YGQ PPA
Sbjct: 395 RKEERRMRLQAQFAQRMP---GAGMPGGMAPYMPPPGVPGAPMYYGQPPPA 442
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 107/292 (36%), Positives = 175/292 (59%), Gaps = 18/292 (6%)
Query: 115 SGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATD-GSGQSKGFGFVQFENKESAQN 173
+GT ++++ +L+ S+ L++ FSS G ++S ++ D + +S G+ +V F++ A +
Sbjct: 34 AGTSSLYVGDLETSVTEAQLYEKFSSIGPVVSIRVCRDLITRRSLGYAYVNFQSPNDAAH 93
Query: 174 AIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYG 233
AID LN +IN K + V + +R+ ++ N+F+KNLD++ ++ L F ++G
Sbjct: 94 AIDVLNFQVINGKPIRVLY----SQRDPAVRRSGVGNIFIKNLDKAIDNKALLDTFAQFG 149
Query: 234 TITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQE 293
TITSA V DG G SK +GFV FE + A A++ +NG + +D++ YVG Q+++ER
Sbjct: 150 TITSAKVAMDGQGNSKGYGFVQFETQEAAQAAIDNVNGMELNDKQVYVGPFQRRAERSNT 209
Query: 294 LKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKG 353
+ +F N+Y+KNL +++ DEKL+E F+E G +TSC +MRD G SKG
Sbjct: 210 GEAKFN-------------NVYVKNLSENLSDEKLREKFAEHGAVTSCVIMRDEEGKSKG 256
Query: 354 SGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
GFV + PE A+ A+ +++G K V AQ+K ER A L+A+F Q R
Sbjct: 257 FGFVCYEEPEGAAAAVEKLDGYTEDEKTWVVCRAQKKAEREAELKAKFDQER 308
>gi|413954516|gb|AFW87165.1| hypothetical protein ZEAMMB73_979278 [Zea mays]
gi|414865260|tpg|DAA43817.1| TPA: hypothetical protein ZEAMMB73_808082 [Zea mays]
Length = 643
Score = 527 bits (1358), Expect = e-147, Method: Compositional matrix adjust.
Identities = 283/565 (50%), Positives = 364/565 (64%), Gaps = 38/565 (6%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
SLYVGDL V + QL+ LFSQV V +VRVCRD+ + SLGYGYVN+ + +A RAL+
Sbjct: 35 ASLYVGDLAETVDEPQLHALFSQVAPVATVRVCRDILSGVSLGYGYVNFYSRQEATRALE 94
Query: 90 VLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKI 149
LNFTPL K IR+M+S+RDPS+RKSG N+F+KNL+ +ID K L++ FSSFG ILSCK+
Sbjct: 95 ALNFTPLIGKYIRVMFSNRDPSLRKSGRANLFVKNLEPNIDSKNLYEIFSSFGAILSCKV 154
Query: 150 ATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFN 209
ATD +GQSKG+GFVQ+E +ESA+ AI+ LNGML N++++FVG +R+++RE KF
Sbjct: 155 ATDSAGQSKGYGFVQYETEESAEAAINGLNGMLANNRKMFVGLHMRRRDREV-----KFT 209
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEAL 269
NV++KNL +++DL++ F +G ITSAVVMRD DG SKCFGFVNF+ + A +AVE
Sbjct: 210 NVYIKNLPTEFSEDDLRQEFAPFGEITSAVVMRDADGASKCFGFVNFKKPEFAIEAVEKA 269
Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLK 329
NGK D+ YVG+AQKK ER+ ELK +F + VDK G+NLY+KN+ D I+DE LK
Sbjct: 270 NGKAIGDKTLYVGRAQKKEERKAELKTRFGRGRDNKVDKPNGINLYLKNIDDGINDEGLK 329
Query: 330 ELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQR 389
+LF EFG + SCKVM D G SKGSGFV+F+T E RA+ MNG+++ KPLYV +AQ
Sbjct: 330 KLFEEFGQVASCKVMVDARGRSKGSGFVSFATAEAGQRAINRMNGRIVGKKPLYVGLAQP 389
Query: 390 KEERRARLQAQFSQM------------------RPVAMGPSVPPRMPMYPPGPSGLGQQF 431
KEER+A L A F+Q P + GP PP+ ++ G Q F
Sbjct: 390 KEERKAMLMAHFAQRNLAMAASQYAGPQQVYFGHPSSPGPIAPPQGAVF-----GFPQHF 444
Query: 432 LYGQAPPAIIPPQMPPRGHA---YRYPLGRNMQDFPFDMGAGSML-----PVPVDMGAGI 483
+ G P I P MPP Y P Q A M P P
Sbjct: 445 VPGMGP--ISPVMMPPHNMQRPRYPGPAPYRQQQAMIHANANHMPNARPGPYPAMPPQAF 502
Query: 484 PRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQ 543
P A+ Q ++ +TA+A+A P Q +LG LY LVEQLERD A KVTGMLLEMD+
Sbjct: 503 PGAGATAWQQHAVSRTTTAVASAGPADQHQILGNKLYALVEQLERDHAGKVTGMLLEMDK 562
Query: 544 TEVLHLLESPEALKAKVAEAMEVLR 568
E+L LL SPEAL+AKV EAM VL+
Sbjct: 563 AEILQLLRSPEALRAKVREAMAVLQ 587
>gi|348552998|ref|XP_003462314.1| PREDICTED: polyadenylate-binding protein 4-like isoform 3 [Cavia
porcellus]
Length = 615
Score = 525 bits (1352), Expect = e-146, Method: Compositional matrix adjust.
Identities = 287/601 (47%), Positives = 387/601 (64%), Gaps = 60/601 (9%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+ + + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G SKG+ FV FE +E+A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 202 -VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ K K F NV++KN E DE+LK++F ++G S VMRD GKSK FGFV++E
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAVE +NGK+ + + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL
Sbjct: 242 EDANKAVEEMNGKEINGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ S
Sbjct: 302 DDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 380 KPLYVAVAQRKEERRARLQAQF----------------SQMRPVAMG---PSVPP---RM 417
KPLYVA+AQRKEER+A L Q+ +Q +P A G P+VP R
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP 420
Query: 418 PMYPPG-----------------------PSGLGQQFLYGQAP------PAIIPPQMPPR 448
P Y P PS + Q G P P +P +P
Sbjct: 421 PYYTPNQLAQMRPNPRWQQGGRPQGFQGMPSAIRQS---GPRPTLRHLAPTGVPTAVPNL 477
Query: 449 GHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALSTALANASP 508
P+ + P P P+ V P+TA + LA A P
Sbjct: 478 APRAAVAAAAPRAVAPYKYASSVRSPHPAIQPLQAPQPAVHVQGQEPLTA--SMLAAAPP 535
Query: 509 EQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLR 568
++Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+LESPE+L++KV EA+ VL+
Sbjct: 536 QEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQ 595
Query: 569 S 569
+
Sbjct: 596 A 596
>gi|22507391|ref|NP_683717.1| polyadenylate-binding protein 4 isoform 2 [Mus musculus]
gi|16307591|gb|AAH10345.1| Poly(A) binding protein, cytoplasmic 4 [Mus musculus]
Length = 615
Score = 525 bits (1351), Expect = e-146, Method: Compositional matrix adjust.
Identities = 287/601 (47%), Positives = 384/601 (63%), Gaps = 60/601 (9%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+ + + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFDVMKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G SKG+ FV FE +E+A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 202 -VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ K K F NV++KN E D +LK++F ++G S VMRD GKSK FGFV++E
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDSSGKSKGFGFVSYEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAVE +NGK+ + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL
Sbjct: 242 EDANKAVEEMNGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D+IDDEKL+ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ S
Sbjct: 302 DDTIDDEKLRREFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 380 KPLYVAVAQRKEERRARLQAQF----------------SQMRPVAMG---PSVPP---RM 417
KPLYVA+AQRKEER+A L Q+ +Q +P A G P+VP R
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPASAILNQFQPAAGGYFVPAVPQAQGRP 420
Query: 418 PMYPPG-----------------------PSGLGQQFLYGQAP------PAIIPPQMPPR 448
P Y P PS L Q G P P +P +P
Sbjct: 421 PYYTPNQLAQMRPNPRWQQGGRPQGFQGMPSALRQS---GPRPALRHLAPTGVPTAVPNL 477
Query: 449 GHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALSTALANASP 508
P+ + P P P+ V P+TA + LA A P
Sbjct: 478 APRAAVAAAAPRAVAPYKYASSVRSPHPAIQPLQAPQPAVHVQGQEPLTA--SMLAAAPP 535
Query: 509 EQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLR 568
++Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+LESPE+L++KV EA+ VL+
Sbjct: 536 QEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQ 595
Query: 569 S 569
+
Sbjct: 596 A 596
>gi|148698435|gb|EDL30382.1| mCG5546, isoform CRA_a [Mus musculus]
Length = 632
Score = 524 bits (1349), Expect = e-146, Method: Compositional matrix adjust.
Identities = 287/601 (47%), Positives = 384/601 (63%), Gaps = 60/601 (9%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+ + + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ P
Sbjct: 20 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 79
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+F
Sbjct: 80 ADAERALDTMNFDVMKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 139
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G SKG+ FV FE +E+A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 140 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 198
Query: 202 -VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ K K F NV++KN E D +LK++F ++G S VMRD GKSK FGFV++E
Sbjct: 199 ELGAKAKEFTNVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDSSGKSKGFGFVSYEKH 258
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAVE +NGK+ + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL
Sbjct: 259 EDANKAVEEMNGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNL 318
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D+IDDEKL+ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ S
Sbjct: 319 DDTIDDEKLRREFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 377
Query: 380 KPLYVAVAQRKEERRARLQAQF----------------SQMRPVAMG---PSVPP---RM 417
KPLYVA+AQRKEER+A L Q+ +Q +P A G P+VP R
Sbjct: 378 KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPASAILNQFQPAAGGYFVPAVPQAQGRP 437
Query: 418 PMYPPG-----------------------PSGLGQQFLYGQAP------PAIIPPQMPPR 448
P Y P PS L Q G P P +P +P
Sbjct: 438 PYYTPNQLAQMRPNPRWQQGGRPQGFQGMPSALRQS---GPRPALRHLAPTGVPTAVPNL 494
Query: 449 GHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALSTALANASP 508
P+ + P P P+ V P+TA + LA A P
Sbjct: 495 APRAAVAAAAPRAVAPYKYASSVRSPHPAIQPLQAPQPAVHVQGQEPLTA--SMLAAAPP 552
Query: 509 EQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLR 568
++Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+LESPE+L++KV EA+ VL+
Sbjct: 553 QEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQ 612
Query: 569 S 569
+
Sbjct: 613 A 613
>gi|242096254|ref|XP_002438617.1| hypothetical protein SORBIDRAFT_10g022900 [Sorghum bicolor]
gi|241916840|gb|EER89984.1| hypothetical protein SORBIDRAFT_10g022900 [Sorghum bicolor]
Length = 631
Score = 522 bits (1345), Expect = e-145, Method: Compositional matrix adjust.
Identities = 288/593 (48%), Positives = 381/593 (64%), Gaps = 69/593 (11%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
+SLYVGDL +V ++QL+ +FSQV ++SVRVCRD+ + SLGYGYVN+ + +A AL+
Sbjct: 37 SSLYVGDLAESVDETQLHAVFSQVAPLVSVRVCRDIVSGVSLGYGYVNFYSRQEATCALE 96
Query: 90 VLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKI 149
LNF PL+ K IR+M+S+RDPS+RKSG N+F+KNL+ SID K L++ FSSFG ILSCK+
Sbjct: 97 ALNFAPLSGKHIRVMFSNRDPSLRKSGRANLFVKNLEPSIDSKNLYEMFSSFGTILSCKV 156
Query: 150 ATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFN 209
ATD +GQSKG+GFVQ+E +ESAQ+AI++LNGML ND+++FVG +R++ RE KF
Sbjct: 157 ATDSAGQSKGYGFVQYETEESAQDAINRLNGMLANDREMFVGLHMRRRNREV-----KFT 211
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEAL 269
NV++KNL +D+DL++ F +G ITSAVVMRD +G SKCFGFVNFE + A +AV+
Sbjct: 212 NVYIKNLPTEFSDDDLRQEFAPFGEITSAVVMRDVNGVSKCFGFVNFEKPEFALEAVKKA 271
Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKET-VDKFQGLNLYIKNLGDSIDDEKL 328
NGK +D+ YVG+AQKK+ER+ ELK +F+Q ++ VDK G+NLY+KN+ DSI+DE L
Sbjct: 272 NGKVINDKTLYVGRAQKKAERQAELKTKFKQEDRDKKVDKPNGINLYLKNIDDSINDEGL 331
Query: 329 KELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
K LF EFG +TSCKVM D G SKGSGFV F+T E A+ MNG+++ KPLYV +AQ
Sbjct: 332 KILFEEFGQVTSCKVMVDAQGRSKGSGFVLFATAEAGHSAINGMNGRIVGKKPLYVGLAQ 391
Query: 389 RKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPPQ---- 444
KEERRA L A F+Q R +AM S P QQ +G P IPPQ
Sbjct: 392 PKEERRAMLMAHFAQ-RNLAMAAS-----------PYAGPQQVYFGHPAPGQIPPQAAVF 439
Query: 445 -----------------MPPRGHAYRYPLGR--------------------NMQDFPFDM 467
MP RYP R N++ P
Sbjct: 440 GFPQHFVPAMGPVSPVMMPHNMQRSRYPRQRTGGPAAYRQQQAMIHANANHNIRYMPNAR 499
Query: 468 GAG--SMLPVPVDMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQ 525
+MLP G P A V Q ++++TA+A+A P Q+ +LG LY LVEQ
Sbjct: 500 HGAYPAMLP------QGFP--SAMVSQQHDGSSITTAVASAEPADQQQILGNKLYALVEQ 551
Query: 526 LERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNP 578
LE D A KVTGMLLEMD+ ++L LL+SPE L+AKV EAM+VL+ + + +P
Sbjct: 552 LEHDHAGKVTGMLLEMDKVKILQLLQSPEVLRAKVREAMDVLQRTKAEGSADP 604
>gi|91095037|ref|XP_975975.1| PREDICTED: similar to poly A binding protein isoform 4 [Tribolium
castaneum]
gi|270014772|gb|EFA11220.1| hypothetical protein TcasGA2_TC005185 [Tribolium castaneum]
Length = 607
Score = 522 bits (1344), Expect = e-145, Method: Compositional matrix adjust.
Identities = 289/597 (48%), Positives = 392/597 (65%), Gaps = 58/597 (9%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL ++T++ L++ FS G VLS+RVCRDL TRRSLGY YVN+ PADA RALD
Sbjct: 12 SLYVGDLHTDITEAMLFEKFSTAGPVLSIRVCRDLITRRSLGYAYVNFQQPADAERALDT 71
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF + + IRIM+S RDPS+RKSG GN+FIKNLD+SID+KA++DTFS+FGNILSCK+A
Sbjct: 72 MNFDLIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDRSIDNKAMYDTFSAFGNILSCKVA 131
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET-VAIKTK-F 208
D +G SKG+GFV FE +E+A +I+K+NGML+N K+V+VG F+ ++ERE + K K F
Sbjct: 132 QDENGTSKGYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREKELGEKAKLF 191
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NV+VKN E T+E L+ +F +YG ITS +M DGKSK FGFV FE+ + A AVEA
Sbjct: 192 TNVYVKNFGEDLTEEQLRTMFEKYGKITSYKIMSKDDGKSKGFGFVAFESPEAAETAVEA 251
Query: 269 LNGKKF-DDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEK 327
LNGK+ D + YVG+AQKK+ER+QELK +FE E ++++QG+NLY+KNL D+IDDE+
Sbjct: 252 LNGKEIIDGKPLYVGRAQKKAERQQELKRRFEALKMERLNRYQGVNLYVKNLDDTIDDER 311
Query: 328 LKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 387
L++ FS FGTITS KVM + SKG GFV FS+PEEA++A+ EMNG+++ SKPLYVA+A
Sbjct: 312 LRKEFSPFGTITSAKVMME-DNRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 370
Query: 388 QRKEERRARLQAQFSQ----MRPVAMG-------------PSVP---------------- 414
QRKE+R+A L +Q+ Q +R MG P++P
Sbjct: 371 QRKEDRKAHLTSQYMQRMANIRMHQMGQFIQPGTSSGYFVPTIPAPQRFYGAAQMAQIRT 430
Query: 415 -PRMPMYPP-GPSGLGQQFLYGQAPPAI-IPPQMPPRGHAYRYPLG----------RNMQ 461
PR P P P G YG P P+ P + A R + N+Q
Sbjct: 431 NPRWPAQTPVRPGAQGSANPYGTIPTTYRAAPRPPNQSAALRSNINVPRPITGQQPPNIQ 490
Query: 462 DFPFDMGAGSMLPVPVDMG---AGIPRRDASVGQPMPITALSTALANASPEQQRTLLGES 518
P A + P +G A ++ + P+TA T LA A P++Q+ +LGE
Sbjct: 491 GRPL---ASQAVVAPAGLGISNAAPVQQAVHIQGQEPLTA--TMLAAAPPQEQKQMLGER 545
Query: 519 LYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQA 575
L+PL++++ D A K+TGMLLE+D +E+LH+LE E+LKAKV EA+ VL++ +QA
Sbjct: 546 LFPLIQRMYPDLAGKITGMLLEIDNSELLHMLEHNESLKAKVEEAVAVLQAHQAKQA 602
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
N++ +LYV +LD + D +L FS G + S +V + RS G+G+V +++P +A
Sbjct: 291 NRYQGVNLYVKNLDDTIDDERLRKEFSPFGTITSAKVM--MEDNRSKGFGFVCFSSPEEA 348
Query: 85 ARALDVLNFTPLNNKSIRIMYSHR 108
+A+ +N + +K + + + R
Sbjct: 349 TKAVTEMNGRIVGSKPLYVALAQR 372
>gi|348553000|ref|XP_003462315.1| PREDICTED: polyadenylate-binding protein 4-like isoform 4 [Cavia
porcellus]
Length = 631
Score = 522 bits (1344), Expect = e-145, Method: Compositional matrix adjust.
Identities = 289/617 (46%), Positives = 391/617 (63%), Gaps = 76/617 (12%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+ + + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G SKG+ FV FE +E+A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 202 -VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ K K F NV++KN E DE+LK++F ++G S VMRD GKSK FGFV++E
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAVE +NGK+ + + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL
Sbjct: 242 EDANKAVEEMNGKEINGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ S
Sbjct: 302 DDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 380 KPLYVAVAQRKEERRARLQAQF----------------SQMRPVAMG---PSVPP---RM 417
KPLYVA+AQRKEER+A L Q+ +Q +P A G P+VP R
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP 420
Query: 418 PMYPPG----------------PSGL-GQQFLYGQAPPAIIPPQMPPRGHAYRYPLGRNM 460
P Y P P G G Q+ P + P G+A P R +
Sbjct: 421 PYYTPNQLAQMRPNPRWQQGGRPQGFQGMPSAIRQSGPRPTLRHLAPTGNA---PASRGL 477
Query: 461 QDFPFDMGAGSML----------------------------PVPVDMGAGIPRRDASVGQ 492
+G + + P P P+ V
Sbjct: 478 PTTTQRVGVPTAVPNLAPRAAVAAAAPRAVAPYKYASSVRSPHPAIQPLQAPQPAVHVQG 537
Query: 493 PMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLES 552
P+TA + LA A P++Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+LES
Sbjct: 538 QEPLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLES 595
Query: 553 PEALKAKVAEAMEVLRS 569
PE+L++KV EA+ VL++
Sbjct: 596 PESLRSKVDEAVAVLQA 612
>gi|119627670|gb|EAX07265.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_e [Homo sapiens]
Length = 615
Score = 521 bits (1343), Expect = e-145, Method: Compositional matrix adjust.
Identities = 290/601 (48%), Positives = 391/601 (65%), Gaps = 60/601 (9%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+ + + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G SKG+ FV FE +E+A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 202 -VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ K K F NV++KN E DE LK++F ++G S VMRD +GKSK FGFV++E
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAVE +NGK+ + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL
Sbjct: 242 EDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ S
Sbjct: 302 DDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 380 KPLYVAVAQRKEERRARLQAQF----------------SQMRPVAMG---PSVPP---RM 417
KPLYVA+AQRKEER+A L Q+ +Q +P A G P+VP R
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP 420
Query: 418 PMYPPG------PSGLGQQFLYGQAP------PAIIPPQMPPRGHAYRYPLG-----RNM 460
P Y P P+ QQ G P P+ I P + P G +N+
Sbjct: 421 PYYTPNQLAQMRPNPRWQQ---GGRPQGFQGMPSAIRQSGPRPTLRHLAPTGVPTAVQNL 477
Query: 461 ------------QDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALSTALANASP 508
P+ + P P P+ V P+TA + LA A P
Sbjct: 478 APRAAVAAAAPRAVAPYKYASSVRSPHPAIQPLQAPQPAVHVQGQEPLTA--SMLAAAPP 535
Query: 509 EQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLR 568
++Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+LESPE+L++KV EA+ VL+
Sbjct: 536 QEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQ 595
Query: 569 S 569
+
Sbjct: 596 A 596
>gi|344287655|ref|XP_003415568.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Loxodonta
africana]
Length = 631
Score = 521 bits (1343), Expect = e-145, Method: Compositional matrix adjust.
Identities = 289/617 (46%), Positives = 389/617 (63%), Gaps = 76/617 (12%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+ + + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G SKG+ FV FE +E+A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 202 -VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ K K F NV++KN E DE LK++F ++G S VMRD GKSK FGFV++E
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAVE +NGK+ + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL
Sbjct: 242 EDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ S
Sbjct: 302 DDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 380 KPLYVAVAQRKEERRARLQAQF----------------SQMRPVAMG---PSVPP---RM 417
KPLYVA+AQRKEER+A L Q+ +Q +P A G P+VP R
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP 420
Query: 418 PMYPPG----------------PSGL-GQQFLYGQAPPAIIPPQMPPRGHAYRYPLGRNM 460
P Y P P G G Q+ P + P G+A P R +
Sbjct: 421 PYYTPNQLAQMRPNPRWQQGGRPQGFQGMPSAIRQSGPRPALRHLAPTGNA---PASRGL 477
Query: 461 QDFPFDMGAGSML----------------------------PVPVDMGAGIPRRDASVGQ 492
+G + + P P P+ V
Sbjct: 478 PTTAQRVGVPTAVQSLAPRAAVAAAAPRAVAPYKYASSVRSPHPAMQPLQAPQPAVHVQG 537
Query: 493 PMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLES 552
P+TA + LA A P++Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+LES
Sbjct: 538 QEPLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLES 595
Query: 553 PEALKAKVAEAMEVLRS 569
PE+L++KV EA+ VL++
Sbjct: 596 PESLRSKVDEAVAVLQA 612
>gi|426215230|ref|XP_004001877.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Ovis aries]
Length = 631
Score = 521 bits (1343), Expect = e-145, Method: Compositional matrix adjust.
Identities = 289/617 (46%), Positives = 390/617 (63%), Gaps = 76/617 (12%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+ + + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G SKG+ FV FE +E+A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 202 -VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ K K F NV++KN E DE+LK++F ++G S VMRD GKSK FGFV++E
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAVE +NGK+ + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL
Sbjct: 242 EDANKAVEEMNGKEITGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ S
Sbjct: 302 DDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 380 KPLYVAVAQRKEERRARLQAQF----------------SQMRPVAMG---PSVPP---RM 417
KPLYVA+AQRKEER+A L Q+ +Q +P A G P+VP R
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP 420
Query: 418 PMYPPG----------------PSGL-GQQFLYGQAPPAIIPPQMPPRGHAYRYPLGRNM 460
P Y P P G G Q+ P + P G+A P R +
Sbjct: 421 PYYTPNQLAQIRPNPRWQQGGRPQGFQGMPSAIRQSGPRPALRHLAPTGNA---PASRGL 477
Query: 461 QDFPFDMGAGSML----------------------------PVPVDMGAGIPRRDASVGQ 492
+G + + P P P+ V
Sbjct: 478 PTTAQRVGVPTAVQNLAPRAAVAAAAPRAVAPYKYASSVRSPHPAIQPLQAPQPAVHVQG 537
Query: 493 PMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLES 552
P+TA + LA A P++Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+LES
Sbjct: 538 QEPLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLES 595
Query: 553 PEALKAKVAEAMEVLRS 569
PE+L++KV EA+ VL++
Sbjct: 596 PESLRSKVDEAVAVLQA 612
>gi|410263252|gb|JAA19592.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
Length = 631
Score = 521 bits (1343), Expect = e-145, Method: Compositional matrix adjust.
Identities = 289/617 (46%), Positives = 390/617 (63%), Gaps = 76/617 (12%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+ + + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G SKG+ FV FE +E+A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 202 -VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ K K F NV++KN E DE LK++F ++G S VMRD +GKSK FGFV++E
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAVE +NGK+ + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL
Sbjct: 242 EDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ S
Sbjct: 302 DDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 380 KPLYVAVAQRKEERRARLQAQF----------------SQMRPVAMG---PSVPP---RM 417
KPLYVA+AQRKEER+A L Q+ +Q +P A G P+VP R
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQREAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP 420
Query: 418 PMYPPG----------------PSGL-GQQFLYGQAPPAIIPPQMPPRGHAYRYPLGRNM 460
P Y P P G G Q+ P + P G+A P R +
Sbjct: 421 PYYTPNQLAQMRPNPRWQQGGRPQGFQGMPSAIRQSGPRPTLRHLAPTGNA---PASRGL 477
Query: 461 QDFPFDMGAGSML----------------------------PVPVDMGAGIPRRDASVGQ 492
+G + + P P P+ V
Sbjct: 478 PTTTQRVGVPTAVQNLAPRAAVAAAAPRAVAPYKYASSVRSPHPAIQPLQAPQPAVHVQG 537
Query: 493 PMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLES 552
P+TA + LA A P++Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+LES
Sbjct: 538 QEPLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLES 595
Query: 553 PEALKAKVAEAMEVLRS 569
PE+L++KV EA+ VL++
Sbjct: 596 PESLRSKVDEAVAVLQA 612
>gi|208431836|ref|NP_001129126.1| polyadenylate-binding protein 4 isoform 3 [Homo sapiens]
gi|332808512|ref|XP_003308043.1| PREDICTED: polyadenylate-binding protein 4 [Pan troglodytes]
gi|395730718|ref|XP_003775778.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Pongo abelii]
gi|426329064|ref|XP_004025564.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Gorilla
gorilla gorilla]
gi|119627671|gb|EAX07266.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_f [Homo sapiens]
gi|410227602|gb|JAA11020.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
Length = 631
Score = 521 bits (1343), Expect = e-145, Method: Compositional matrix adjust.
Identities = 289/617 (46%), Positives = 390/617 (63%), Gaps = 76/617 (12%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+ + + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G SKG+ FV FE +E+A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 202 -VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ K K F NV++KN E DE LK++F ++G S VMRD +GKSK FGFV++E
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAVE +NGK+ + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL
Sbjct: 242 EDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ S
Sbjct: 302 DDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 380 KPLYVAVAQRKEERRARLQAQF----------------SQMRPVAMG---PSVPP---RM 417
KPLYVA+AQRKEER+A L Q+ +Q +P A G P+VP R
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP 420
Query: 418 PMYPPG----------------PSGL-GQQFLYGQAPPAIIPPQMPPRGHAYRYPLGRNM 460
P Y P P G G Q+ P + P G+A P R +
Sbjct: 421 PYYTPNQLAQMRPNPRWQQGGRPQGFQGMPSAIRQSGPRPTLRHLAPTGNA---PASRGL 477
Query: 461 QDFPFDMGAGSML----------------------------PVPVDMGAGIPRRDASVGQ 492
+G + + P P P+ V
Sbjct: 478 PTTTQRVGVPTAVQNLAPRAAVAAAAPRAVAPYKYASSVRSPHPAIQPLQAPQPAVHVQG 537
Query: 493 PMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLES 552
P+TA + LA A P++Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+LES
Sbjct: 538 QEPLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLES 595
Query: 553 PEALKAKVAEAMEVLRS 569
PE+L++KV EA+ VL++
Sbjct: 596 PESLRSKVDEAVAVLQA 612
>gi|338721952|ref|XP_003364452.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Equus
caballus]
Length = 631
Score = 521 bits (1342), Expect = e-145, Method: Compositional matrix adjust.
Identities = 289/617 (46%), Positives = 389/617 (63%), Gaps = 76/617 (12%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+ + + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G SKG+ FV FE +E+A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 202 -VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ K K F NV++KN E DE LK++F ++G S VMRD GKSK FGFV++E
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAVE +NGK+ + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL
Sbjct: 242 EDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ S
Sbjct: 302 DDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 380 KPLYVAVAQRKEERRARLQAQF----------------SQMRPVAMG---PSVPP---RM 417
KPLYVA+AQRKEER+A L Q+ +Q +P A G P+VP R
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP 420
Query: 418 PMYPPG----------------PSGL-GQQFLYGQAPPAIIPPQMPPRGHAYRYPLGRNM 460
P Y P P G G Q+ P + P G+A P R +
Sbjct: 421 PYYTPNQLAQMRPNPRWQQGGRPQGFQGMPSAIRQSGPRPTLRHLAPTGNA---PASRGL 477
Query: 461 QDFPFDMGAGSML----------------------------PVPVDMGAGIPRRDASVGQ 492
+G + + P P P+ V
Sbjct: 478 PTTAQRVGVPTAVQNLAPRAAVAAAAPRAVAPYKYASSVRSPHPAIQPLQAPQPAVHVQG 537
Query: 493 PMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLES 552
P+TA + LA A P++Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+LES
Sbjct: 538 QEPLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLES 595
Query: 553 PEALKAKVAEAMEVLRS 569
PE+L++KV EA+ VL++
Sbjct: 596 PESLRSKVDEAVAVLQA 612
>gi|332248417|ref|XP_003273360.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Nomascus
leucogenys]
gi|383411099|gb|AFH28763.1| polyadenylate-binding protein 4 isoform 3 [Macaca mulatta]
gi|384941234|gb|AFI34222.1| polyadenylate-binding protein 4 isoform 3 [Macaca mulatta]
Length = 631
Score = 521 bits (1342), Expect = e-145, Method: Compositional matrix adjust.
Identities = 289/617 (46%), Positives = 389/617 (63%), Gaps = 76/617 (12%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+ + + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G SKG+ FV FE +E+A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 202 -VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ K K F NV++KN E DE LK++F ++G S VMRD GKSK FGFV++E
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAVE +NGK+ + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL
Sbjct: 242 EDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ S
Sbjct: 302 DDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 380 KPLYVAVAQRKEERRARLQAQF----------------SQMRPVAMG---PSVPP---RM 417
KPLYVA+AQRKEER+A L Q+ +Q +P A G P+VP R
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP 420
Query: 418 PMYPPG----------------PSGL-GQQFLYGQAPPAIIPPQMPPRGHAYRYPLGRNM 460
P Y P P G G Q+ P + P G+A P R +
Sbjct: 421 PYYTPNQLAQMRPNPRWQQGGRPQGFQGMPSAIRQSGPRPTLRHLAPTGNA---PASRGL 477
Query: 461 QDFPFDMGAGSML----------------------------PVPVDMGAGIPRRDASVGQ 492
+G + + P P P+ V
Sbjct: 478 PTTTQRVGVPTAVQNLAPRAAVAAAAPRAVAPYKYASSVRSPHPAIQPLQAPQPAVHVQG 537
Query: 493 PMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLES 552
P+TA + LA A P++Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+LES
Sbjct: 538 QEPLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLES 595
Query: 553 PEALKAKVAEAMEVLRS 569
PE+L++KV EA+ VL++
Sbjct: 596 PESLRSKVDEAVAVLQA 612
>gi|410966844|ref|XP_003989937.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Felis catus]
Length = 631
Score = 521 bits (1342), Expect = e-145, Method: Compositional matrix adjust.
Identities = 289/617 (46%), Positives = 389/617 (63%), Gaps = 76/617 (12%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+ + + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G SKG+ FV FE +E+A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 202 -VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ K K F NV++KN E DE LK++F ++G S VMRD GKSK FGFV++E
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAVE +NGK+ + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL
Sbjct: 242 EDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ S
Sbjct: 302 DDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 380 KPLYVAVAQRKEERRARLQAQF----------------SQMRPVAMG---PSVPP---RM 417
KPLYVA+AQRKEER+A L Q+ +Q +P A G P+VP R
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP 420
Query: 418 PMYPPG----------------PSGL-GQQFLYGQAPPAIIPPQMPPRGHAYRYPLGRNM 460
P Y P P G G Q+ P + P G+A P R +
Sbjct: 421 PYYTPNQLAQMRPNPRWQQGGRPQGFQGMPSAIRQSGPRPALRHLAPTGNA---PASRGL 477
Query: 461 QDFPFDMGAGSML----------------------------PVPVDMGAGIPRRDASVGQ 492
+G + + P P P+ V
Sbjct: 478 PTTAQRVGVPTAVQTLAPRAAVAAAAPRAVAPYKYASSVRSPHPAIQPLQAPQPAVHVQG 537
Query: 493 PMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLES 552
P+TA + LA A P++Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+LES
Sbjct: 538 QEPLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLES 595
Query: 553 PEALKAKVAEAMEVLRS 569
PE+L++KV EA+ VL++
Sbjct: 596 PESLRSKVDEAVAVLQA 612
>gi|402854031|ref|XP_003891684.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Papio anubis]
Length = 631
Score = 521 bits (1341), Expect = e-145, Method: Compositional matrix adjust.
Identities = 289/617 (46%), Positives = 389/617 (63%), Gaps = 76/617 (12%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+ + + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G SKG+ FV FE +E+A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 202 -VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ K K F NV++KN E DE LK++F ++G S VMRD GKSK FGFV++E
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAVE +NGK+ + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL
Sbjct: 242 EDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ S
Sbjct: 302 DDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 380 KPLYVAVAQRKEERRARLQAQF----------------SQMRPVAMG---PSVPP---RM 417
KPLYVA+AQRKEER+A L Q+ +Q +P A G P+VP R
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP 420
Query: 418 PMYPPG----------------PSGL-GQQFLYGQAPPAIIPPQMPPRGHAYRYPLGRNM 460
P Y P P G G Q+ P + P G+A P R +
Sbjct: 421 PYYTPNQLAQMRPNPRWQQGGRPQGFQGMPSAIRQSGPRPALRHLAPTGNA---PASRGL 477
Query: 461 QDFPFDMGAGSML----------------------------PVPVDMGAGIPRRDASVGQ 492
+G + + P P P+ V
Sbjct: 478 PTTTQRVGVPTAVQNLAPRAAVAAAAPRAVAPYKYASSVRSPHPAIQPLQAPQPAVHVQG 537
Query: 493 PMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLES 552
P+TA + LA A P++Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+LES
Sbjct: 538 QEPLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLES 595
Query: 553 PEALKAKVAEAMEVLRS 569
PE+L++KV EA+ VL++
Sbjct: 596 PESLRSKVDEAVAVLQA 612
>gi|291408596|ref|XP_002720594.1| PREDICTED: polyadenylate-binding protein 1-like isoform 2
[Oryctolagus cuniculus]
Length = 614
Score = 521 bits (1341), Expect = e-145, Method: Compositional matrix adjust.
Identities = 285/607 (46%), Positives = 387/607 (63%), Gaps = 64/607 (10%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
S + SLYVGDL +VT++ LY+ FS G +LS+RVCRD+ TRRSLGY YVN+ PA
Sbjct: 4 SAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPA 63
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
DA RALD +NF + K +RIM+S RDPS+ KSG GNIFIKNLDKSID+KAL+DTFS+FG
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWSQRDPSLHKSGVGNIFIKNLDKSIDNKALYDTFSAFG 123
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 202
NILSCK+ D +G SKG+GFV FE +E+A+ AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 124 NILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Query: 203 --AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
A +F NV++KN E DE LK +FG++G S VM D GKSK FGFV+FE +
Sbjct: 183 LGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHE 242
Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
DA KAV+ +NGK+ + ++ YVG+AQKK ER+ ELK +FEQ ++ + ++QG+NLY+KNL
Sbjct: 243 DAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLD 302
Query: 321 DSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSK 380
D IDDE+L++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +K
Sbjct: 303 DGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATK 361
Query: 381 PLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGL------GQQFLYG 434
PLYVA+AQRKEER+A L Q+ Q P P P PSG Q
Sbjct: 362 PLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGYFMAAIPQTQNRAA 421
Query: 435 QAPPAIIPPQMP-PRGHAYRYPLGRNMQDFPFDMGAGSMLPV----PVDM----GAGIPR 485
PP+ I P PR A + + PF G++ P P + +PR
Sbjct: 422 YYPPSQIAQLRPSPRWTA------QGARPHPFQNMPGAIRPAAPRPPFSTMRPASSQVPR 475
Query: 486 ------------------------------RDASVGQPM-------PITALSTALANASP 508
R ++ QP P+TA + LA+A P
Sbjct: 476 VMSTQRVANTSTQTMGPRPAAAAAAATPAVRTVTMQQPAVHVQGQEPLTA--SMLASAPP 533
Query: 509 EQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLR 568
++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE+L++KV EA+ VL+
Sbjct: 534 QEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQ 593
Query: 569 SVAQQQA 575
+ ++A
Sbjct: 594 AHQAKEA 600
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 109/298 (36%), Positives = 173/298 (58%), Gaps = 16/298 (5%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFEN 167
+PS ++++ +L + L++ FS G ILS ++ D + +S G+ +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
A+ A+D +N +I K V + +R+ K+ N+F+KNLD+S ++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMW----SQRDPSLHKSGVGNIFIKNLDKSIDNKALYD 117
Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
F +G I S V+ D +G SK +GFV+FE + A +A+E +NG +DR+ +VG+ + +
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
ERE EL + ++ N+YIKN G+ +DDE+LK+LF +FG S KVM D
Sbjct: 177 KEREAELGARAKEFT----------NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE 226
Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
SG SKG GFV+F E+A +A+ EMNGK + K +YV AQ+K ER+ L+ +F QM+
Sbjct: 227 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 284
>gi|395853072|ref|XP_003799044.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Otolemur
garnettii]
Length = 633
Score = 520 bits (1340), Expect = e-145, Method: Compositional matrix adjust.
Identities = 289/619 (46%), Positives = 389/619 (62%), Gaps = 78/619 (12%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+ + + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G SKG+ FV FE +E+A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 202 -VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ K K F NV++KN E DE LK++F ++G S VMRD GKSK FGFV++E
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAVE +NGK+ + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL
Sbjct: 242 EDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ S
Sbjct: 302 DDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 380 KPLYVAVAQRKEERRARLQAQF----------------SQMRPVAMG---PSVPP---RM 417
KPLYVA+AQRKEER+A L Q+ +Q +P A G P+VP R
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP 420
Query: 418 PMYPPG----------------PSGL-GQQFLYGQAPPAIIPPQMPPRGHAYRYPLGRNM 460
P Y P P G G Q+ P + P G+A P R +
Sbjct: 421 PYYTPNQLAQMRPNPRWQQGGRPQGFQGMPSAIRQSGPRPTLRHLAPTGNA---PASRGL 477
Query: 461 QDFPFDMGAGSML------------------------------PVPVDMGAGIPRRDASV 490
+G + + P P P+ V
Sbjct: 478 PTTTQRVGVPTAVQNLAPRAAVAAATAAPRAVAPYKYASSVRSPHPAIQPLQAPQPAVHV 537
Query: 491 GQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLL 550
P+TA + LA A P++Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+L
Sbjct: 538 QGQEPLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHML 595
Query: 551 ESPEALKAKVAEAMEVLRS 569
ESPE+L++KV EA+ VL++
Sbjct: 596 ESPESLRSKVDEAVAVLQA 614
>gi|41388837|gb|AAH65540.1| PABPC4 protein [Homo sapiens]
Length = 631
Score = 520 bits (1338), Expect = e-144, Method: Compositional matrix adjust.
Identities = 288/617 (46%), Positives = 389/617 (63%), Gaps = 76/617 (12%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+ + + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+K L+DTFS+F
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKVLYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G SKG+ FV FE +E+A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 202 -VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ K K F NV++KN E DE LK++F ++G S VMRD +GKSK FGFV++E
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAVE +NGK+ + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL
Sbjct: 242 EDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ S
Sbjct: 302 DDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 380 KPLYVAVAQRKEERRARLQAQF----------------SQMRPVAMG---PSVPP---RM 417
KPLYVA+AQRKEER+A L Q+ +Q +P A G P+VP R
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP 420
Query: 418 PMYPPG----------------PSGL-GQQFLYGQAPPAIIPPQMPPRGHAYRYPLGRNM 460
P Y P P G G Q+ P + P G+A P R +
Sbjct: 421 PYYTPNQLAQMRPNPRWQQGGRPQGFQGMPSAIRQSGPRPTLRHLAPTGNA---PASRGL 477
Query: 461 QDFPFDMGAGSML----------------------------PVPVDMGAGIPRRDASVGQ 492
+G + + P P P+ V
Sbjct: 478 PTTTQRVGVPTAVQNLAPRAAVAAAAPRAVAPYKYASSVRSPHPAIQPLQAPQPAVHVQG 537
Query: 493 PMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLES 552
P+TA + LA A P++Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+LES
Sbjct: 538 QEPLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLES 595
Query: 553 PEALKAKVAEAMEVLRS 569
PE+L++KV EA+ VL++
Sbjct: 596 PESLRSKVDEAVAVLQA 612
>gi|395333502|gb|EJF65879.1| polyadenylate binding protein [Dichomitus squalens LYAD-421 SS1]
Length = 664
Score = 518 bits (1335), Expect = e-144, Method: Compositional matrix adjust.
Identities = 286/631 (45%), Positives = 393/631 (62%), Gaps = 94/631 (14%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVG+LD VT++ L+++F+ +G V S+RVCRD TRRSLGY YVNY N AD RAL
Sbjct: 43 SASLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERAL 102
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LN++ + ++ RIM+S RDP++RK+G GNIFIKNLD+ ID+KALHDTF++FGN+LSCK
Sbjct: 103 EQLNYSLIKGRACRIMWSQRDPALRKTGQGNIFIKNLDEQIDNKALHDTFAAFGNVLSCK 162
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFL------RKQERETV 202
+ATD G+SKG+GFV +E E+A+ AI +NGML+NDK+V+VGH + R+++ +
Sbjct: 163 VATDEHGRSKGYGFVHYETAEAAETAIKAVNGMLLNDKKVYVGHHISRKASSRERQSKLE 222
Query: 203 AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDA 262
+K +F N++VKNLD T +D K+F ++G +TSAV+ D G+S+ FGFVNFE ++A
Sbjct: 223 EMKAQFTNIYVKNLDPEVTQDDFVKLFEQFGNVTSAVIQTDEQGQSRGFGFVNFETHEEA 282
Query: 263 AKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDS 322
KAVE L+ ++ R+ +V +AQKK+ERE+EL+ +EQA E + K+QG+NLYIKNL D
Sbjct: 283 QKAVETLHDSEYHGRKLFVSRAQKKAEREEELRKSYEQAKVEKMSKYQGVNLYIKNLEDD 342
Query: 323 IDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPL 382
IDDE+L++ F FG+ITS KVMRD G SKG GFV FS+P+EA++A+AEMN KMI SKPL
Sbjct: 343 IDDERLRQEFEPFGSITSAKVMRDEKGTSKGFGFVCFSSPDEATKAVAEMNNKMIGSKPL 402
Query: 383 YVAVAQRKEERRARLQAQFSQMRPVAM--------------GP----------------- 411
YV++AQR+E RR +L++Q +Q + M GP
Sbjct: 403 YVSLAQRREVRRQQLESQIAQRNQIRMQQAAAAGIPGGYLNGPMYYPPGPGAYPPPGGRG 462
Query: 412 --------SVPPRMPMYPPG---PSGLGQQFLYGQAPPAI---IP--------------- 442
+PPR P Y P P+G+ YGQAPP IP
Sbjct: 463 MMGYGQPGMLPPR-PRYAPNNQVPAGIPIPAPYGQAPPQAYGGIPGYPRAPRGPPPAGRG 521
Query: 443 -----PQMP-----PRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPR------- 485
P P PRG+A P G P AG P A P+
Sbjct: 522 GPPADPNSPPVNGAPRGNA---PQGAAANRPP----AGGQPPAARAPTANRPQARQAPPA 574
Query: 486 -RDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQT 544
A G+ ITA ALANASP +Q+ +LGE +Y + + + A K+TGMLLEMD T
Sbjct: 575 AVAAPTGEVPTITA--AALANASPMEQKQMLGEVIYMKIAPSQPELAGKITGMLLEMDNT 632
Query: 545 EVLHLLESPEALKAKVAEAMEVLRSVAQQQA 575
E+LHLLESP+A+ +KV EA+ VL ++++
Sbjct: 633 ELLHLLESPDAMNSKVNEALAVLHEFTKEES 663
>gi|340719924|ref|XP_003398394.1| PREDICTED: polyadenylate-binding protein 1-like isoform 4 [Bombus
terrestris]
Length = 612
Score = 518 bits (1335), Expect = e-144, Method: Compositional matrix adjust.
Identities = 294/609 (48%), Positives = 394/609 (64%), Gaps = 78/609 (12%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL ++T++ L++ FS G VLS+RVCRD+ TRRSLGY YVN+ PADA RALD
Sbjct: 12 SLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF + + IRIM+S RDPS+RKSG GN+FIKNLDK+ID+KA++DTFS+FGNILSCK+A
Sbjct: 72 MNFDMIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVA 131
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET-VAIKTK-F 208
D SG SKG+GFV FE +E+A +ID++NGML+N K+V+VG F+ ++ERE + K K F
Sbjct: 132 QDESGVSKGYGFVHFETEEAANKSIDRVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLF 191
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NV+VKN E TD+ LK++F +YGTITS VM DGKS+ FGFV FE+ D A +AV
Sbjct: 192 TNVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGKSRGFGFVAFEDPDAAEQAVLE 251
Query: 269 LNGKKF-DDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEK 327
LNGK+ + + YVG+AQKK+ER+QELK +FEQ E ++++QG+NLY+KNL DSIDDE+
Sbjct: 252 LNGKEVAEGKCMYVGRAQKKAERQQELKRKFEQLKLERLNRYQGVNLYVKNLDDSIDDER 311
Query: 328 LKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 387
L++ F+ FGTITS KVM + G SKG GFV FS PEEA++A+ EMNG++IV+KPLYVA+A
Sbjct: 312 LRKEFAPFGTITSAKVMME-EGRSKGFGFVCFSAPEEATKAVTEMNGRIIVTKPLYVALA 370
Query: 388 QRKEERRARLQAQFSQ----MRPVAMG-------------PSVP---------------- 414
QRKE+R+A L +Q+ Q MR MG P++P
Sbjct: 371 QRKEDRKAHLASQYMQRLANMRMQQMGQIFQPGGAGNYFVPTIPQPQRFYGPAQMAQIRT 430
Query: 415 -PRMPMYP--------PGPSGLG-QQFLYGQAP--PAIIPPQM----------------P 446
PR P P G SG Q + AP P P M
Sbjct: 431 TPRWPAQPNQVRPNAQTGSSGFATMQGPFRAAPRAPTAQPGAMRSTLSARPITAVGVSAQ 490
Query: 447 PRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALSTALANA 506
R Y+Y NM++ P M + P PV I ++ P+TA + LA A
Sbjct: 491 SRPSNYKY--TSNMRNPPQAMAIPT--PTPVQQAVHIQGQE-------PLTA--SMLAAA 537
Query: 507 SPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEV 566
P++Q+ +LGE L+PL++ + K+TGMLLE+D +E+LH+LE E+LKAKV EA+ V
Sbjct: 538 PPQEQKQMLGERLFPLIQCMYPQLTGKITGMLLEIDNSELLHMLEHNESLKAKVEEAVAV 597
Query: 567 LRSVAQQQA 575
L++ +QA
Sbjct: 598 LQAHQAKQA 606
Score = 45.1 bits (105), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
N++ +LYV +LD ++ D +L F+ G + S +V + RS G+G+V ++ P +A
Sbjct: 291 NRYQGVNLYVKNLDDSIDDERLRKEFAPFGTITSAKVM--MEEGRSKGFGFVCFSAPEEA 348
Query: 85 ARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNL 125
+A+ +N + K + + + R RK+ + +++ L
Sbjct: 349 TKAVTEMNGRIIVTKPLYVALAQRKED-RKAHLASQYMQRL 388
>gi|119627667|gb|EAX07262.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_b [Homo sapiens]
Length = 645
Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust.
Identities = 296/629 (47%), Positives = 396/629 (62%), Gaps = 86/629 (13%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+ + + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G SKG+ FV FE +E+A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 202 -VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ K K F NV++KN E DE LK++F ++G S VMRD +GKSK FGFV++E
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAVE +NGK+ + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL
Sbjct: 242 EDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ S
Sbjct: 302 DDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 380 KPLYVAVAQRKEERRARLQAQF----------------SQMRPVAMG---PSVPP---RM 417
KPLYVA+AQRKEER+A L Q+ +Q +P A G P+VP R
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP 420
Query: 418 PMYPPG------PSGLGQQFLYGQAP------PAIIPPQMPPRGHAYRYPLGRNMQD-FP 464
P Y P P+ QQ G P P+ I P + P G D
Sbjct: 421 PYYTPNQLAQMRPNPRWQQ---GGRPQGFQGMPSAIRQSGPRPTLRHLAPTGSECPDRLA 477
Query: 465 FDM-GAGSM---LPVPVDMGAGIP-----------------------RRDASVGQPMP-I 496
D GAG+ L G G+P + +SV P P I
Sbjct: 478 MDFGGAGAAQQGLTDSCQSGGGVPTAVQNLAPRAAVAAAAPRAVAPYKYASSVRSPHPAI 537
Query: 497 TAL----------------STALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLE 540
L ++ LA A P++Q+ +LGE L+PL++ + + A K+TGMLLE
Sbjct: 538 QPLQAPQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLE 597
Query: 541 MDQTEVLHLLESPEALKAKVAEAMEVLRS 569
+D +E+LH+LESPE+L++KV EA+ VL++
Sbjct: 598 IDNSELLHMLESPESLRSKVDEAVAVLQA 626
>gi|443722844|gb|ELU11546.1| hypothetical protein CAPTEDRAFT_164502 [Capitella teleta]
Length = 629
Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust.
Identities = 295/631 (46%), Positives = 407/631 (64%), Gaps = 75/631 (11%)
Query: 24 GNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPAD 83
G + SLYVGDL +VT++ L++ FS G VLS+RVCRDL TRRSLGY YVN+ PAD
Sbjct: 6 GPSYPMASLYVGDLHPDVTEAMLFEKFSTAGPVLSIRVCRDLITRRSLGYAYVNFQQPAD 65
Query: 84 AARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGN 143
A RALD +NF + + IRIM+S RDPS+RKSG GNIFIKNLDK+ID+KAL+DTFS+FGN
Sbjct: 66 AERALDTMNFDAIKGRPIRIMWSQRDPSLRKSGVGNIFIKNLDKNIDNKALYDTFSAFGN 125
Query: 144 ILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER-ETV 202
ILSCKIA D +G S G+GFV FE +E+A+N+I+K+NGML+N K+VFVG F+ ++ER E +
Sbjct: 126 ILSCKIAMDQNG-SLGYGFVHFETEEAARNSIEKVNGMLLNGKKVFVGRFMSRKERLEML 184
Query: 203 AIKT-KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADD 261
K KF NV+VKNL+E+ D+ L+++F +G I SA +M +G+ + FGFV+F++ +
Sbjct: 185 GDKAKKFTNVYVKNLNETMDDKKLREMFEVFGKIISAKMMNTEEGQKRGFGFVSFDDHEA 244
Query: 262 AAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGD 321
AAKAVE LN K+ + +E YVG+AQKK+ER+ ELK +FE+ E ++++QG+NLY+KNL +
Sbjct: 245 AAKAVEELNNKEVEGKEIYVGRAQKKAERQAELKEKFERMKMERINRYQGVNLYVKNLDE 304
Query: 322 SIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKP 381
IDDE+L++ FS+FGTITS +VM + G +KG GFV FS+PEEA++A+ EMNG+++V+KP
Sbjct: 305 QIDDERLRKEFSQFGTITSARVMTE-GGRTKGFGFVCFSSPEEATKAVTEMNGRIVVAKP 363
Query: 382 LYVAVAQRKEERRARLQAQFSQ----MR-----------PVAMGPSVPP-----RMPMYP 421
LYVA+AQRKE+R+A L AQ+ Q MR P G VP R Y
Sbjct: 364 LYVALAQRKEDRKAHLAAQYMQRIAGMRMQGQGVNQIFGPGGTGYFVPTMAQTQRGGFYA 423
Query: 422 P--------------GPSGLGQQFLYGQAPPAIIPPQMPPRGHAYRYPLGRNMQDF---- 463
P P+ Q Y Q P + P PR + + G N +
Sbjct: 424 PTQIAPQVRSTPRWQAPNPRAQTAGYAQLPGS--GPMRNPRPNTQQVRAGANSRPITGEF 481
Query: 464 ------------PFDMGAGSMLPVP-------------VDMGAGIPRRDASV---GQPMP 495
P M AG P V GA P+ +V GQ P
Sbjct: 482 RMPGAQVNRPAQPGAMQAGGQQRAPFKYTQAVRNATGQVPGGAAQPQAQTAVVIQGQE-P 540
Query: 496 ITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEA 555
+TA + LA A+P++Q+ +LGE L+PL++ + D A K+TGMLLE+D +E+LH+LES E+
Sbjct: 541 LTA--SMLAAAAPQEQKQMLGERLFPLIQSMYPDLAGKITGMLLEIDNSELLHMLESRES 598
Query: 556 LKAKVAEAMEVLRSVAQQQANNPADQLASLS 586
LKAKV EA+ VL++ +++ +P L S S
Sbjct: 599 LKAKVEEAVAVLQAHQAKESTDPIPSLKSSS 629
>gi|340719922|ref|XP_003398393.1| PREDICTED: polyadenylate-binding protein 1-like isoform 3 [Bombus
terrestris]
Length = 621
Score = 517 bits (1332), Expect = e-144, Method: Compositional matrix adjust.
Identities = 294/620 (47%), Positives = 396/620 (63%), Gaps = 91/620 (14%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL ++T++ L++ FS G VLS+RVCRD+ TRRSLGY YVN+ PADA RALD
Sbjct: 12 SLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF + + IRIM+S RDPS+RKSG GN+FIKNLDK+ID+KA++DTFS+FGNILSCK+A
Sbjct: 72 MNFDMIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVA 131
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET-VAIKTK-F 208
D SG SKG+GFV FE +E+A +ID++NGML+N K+V+VG F+ ++ERE + K K F
Sbjct: 132 QDESGVSKGYGFVHFETEEAANKSIDRVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLF 191
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NV+VKN E TD+ LK++F +YGTITS VM DGKS+ FGFV FE+ D A +AV
Sbjct: 192 TNVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGKSRGFGFVAFEDPDAAEQAVLE 251
Query: 269 LNGKKF-DDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEK 327
LNGK+ + + YVG+AQKK+ER+QELK +FEQ E ++++QG+NLY+KNL DSIDDE+
Sbjct: 252 LNGKEVAEGKCMYVGRAQKKAERQQELKRKFEQLKLERLNRYQGVNLYVKNLDDSIDDER 311
Query: 328 LKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 387
L++ F+ FGTITS KVM + G SKG GFV FS PEEA++A+ EMNG++IV+KPLYVA+A
Sbjct: 312 LRKEFAPFGTITSAKVMME-EGRSKGFGFVCFSAPEEATKAVTEMNGRIIVTKPLYVALA 370
Query: 388 QRKEERRARLQAQFSQ----MRPVAMG-------------PSVP---------------- 414
QRKE+R+A L +Q+ Q MR MG P++P
Sbjct: 371 QRKEDRKAHLASQYMQRLANMRMQQMGQIFQPGGAGNYFVPTIPQPQRFYGPAQMAQIRT 430
Query: 415 -PRMPMYP--------PGPSGLG----------------------QQFLYG-------QA 436
PR P P G SG QQ + G A
Sbjct: 431 TPRWPAQPNQVRPNAQTGSSGFATMQGPFRAAPRAPTAQPGAMRSQQTVGGANMQSRSMA 490
Query: 437 PPAI-IPPQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMP 495
PA+ + Q P + Y NM++ P M + P PV I ++ P
Sbjct: 491 GPAVGVSAQSRPSNYKYT----SNMRNPPQAMAIPT--PTPVQQAVHIQGQE-------P 537
Query: 496 ITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEA 555
+TA + LA A P++Q+ +LGE L+PL++ + K+TGMLLE+D +E+LH+LE E+
Sbjct: 538 LTA--SMLAAAPPQEQKQMLGERLFPLIQCMYPQLTGKITGMLLEIDNSELLHMLEHNES 595
Query: 556 LKAKVAEAMEVLRSVAQQQA 575
LKAKV EA+ VL++ +QA
Sbjct: 596 LKAKVEEAVAVLQAHQAKQA 615
Score = 45.4 bits (106), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
N++ +LYV +LD ++ D +L F+ G + S +V + RS G+G+V ++ P +A
Sbjct: 291 NRYQGVNLYVKNLDDSIDDERLRKEFAPFGTITSAKVM--MEEGRSKGFGFVCFSAPEEA 348
Query: 85 ARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNL 125
+A+ +N + K + + + R RK+ + +++ L
Sbjct: 349 TKAVTEMNGRIIVTKPLYVALAQRKED-RKAHLASQYMQRL 388
>gi|302767104|ref|XP_002966972.1| hypothetical protein SELMODRAFT_168822 [Selaginella moellendorffii]
gi|300164963|gb|EFJ31571.1| hypothetical protein SELMODRAFT_168822 [Selaginella moellendorffii]
Length = 654
Score = 516 bits (1330), Expect = e-143, Method: Compositional matrix adjust.
Identities = 298/610 (48%), Positives = 380/610 (62%), Gaps = 83/610 (13%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
SLYVGDLD V ++QL+ +FSQ+G V SVRVCRD TRRSLGYGYVNY++ ADA RA++
Sbjct: 38 VSLYVGDLDETVAETQLFTIFSQMGLVTSVRVCRDAVTRRSLGYGYVNYSSGADAVRAME 97
Query: 90 VLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKI 149
LN+TP+N K+IRIM+SHRDPS RKSG GNIFIKNLD+SID+KALHDTF +FG ILSCKI
Sbjct: 98 ALNYTPINGKTIRIMWSHRDPSTRKSGVGNIFIKNLDESIDNKALHDTFIAFGPILSCKI 157
Query: 150 ATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFN 209
A G+SKG+GFV FE E+A AI+K+NGM + K+VFV F+++ +R +TKF
Sbjct: 158 AHQ-DGRSKGYGFVHFETDEAANLAIEKVNGMQLVGKKVFVAKFVKRSDRLAATGETKFT 216
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEAL 269
NVFVKNLD +E++K+ F +G IT+ V+M+D + KSK FGFVNF++ + A AVE +
Sbjct: 217 NVFVKNLDPEMAEEEIKEHFSTFGVITNVVIMKDENDKSKGFGFVNFDDPEAARAAVETM 276
Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLK 329
N + R YVG+AQKK+EREQ L+ QFE+ E K+QG NLY+KNL DSIDDE LK
Sbjct: 277 NNSQLGSRTIYVGRAQKKAEREQILRRQFEEKRMEQFQKYQGANLYVKNLDDSIDDETLK 336
Query: 330 ELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQR 389
+ FS +G ITS KVMRD GISKG GFV F++PEEASRA E NG MI KP+YVA+AQR
Sbjct: 337 QEFSRYGNITSAKVMRDEKGISKGFGFVCFTSPEEASRAATETNGLMINGKPIYVAMAQR 396
Query: 390 KEERR-------------------ARLQAQFSQMR---PVAMGPSVPPRM---------- 417
KE R+ A++ A + + P A+ P VP R
Sbjct: 397 KEIRQAQLQQQYAQRMSGLMPPPGAQVAAAYPPVYYAAPPALLPQVPQRQGLMYQPVMRP 456
Query: 418 -----PMYPPGPSGLGQQFLYGQAPPAII--------PP-----------QMP------P 447
P+ PPG L Y P A PP Q+P P
Sbjct: 457 GWRTGPLAPPGRPSLQPLPPYALVPNAQRQQRQVRNRPPGGQPLAQIPQLQIPQPQAIQP 516
Query: 448 RGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQP-------MPITA-- 498
G+ GRN Q P +M V G PR A+ G P MP+
Sbjct: 517 GGYKEN---GRNQQQRPRQ----AMKYV----NNGRPRDGAAAGGPVLMVPGNMPMGGND 565
Query: 499 LSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKA 558
+ + ++ ASP+QQ+ LLGE L+PLV + D A K+TGMLLEMD +E+L LLE+PEAL +
Sbjct: 566 VLSMMSAASPQQQKQLLGERLFPLVRTHQFDLAGKITGMLLEMDNSELLVLLETPEALAS 625
Query: 559 KVAEAMEVLR 568
KV EA++VL+
Sbjct: 626 KVDEAVQVLQ 635
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 311 GLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP-SGISKGSGFVAFSTPEEASRAL 369
G++LY+ +L +++ + +L +FS+ G +TS +V RD + S G G+V +S+ +A RA+
Sbjct: 37 GVSLYVGDLDETVAETQLFTIFSQMGLVTSVRVCRDAVTRRSLGYGYVNYSSGADAVRAM 96
Query: 370 AEMNGKMIVSKPLYVAVAQRKEERR 394
+N I K + + + R R
Sbjct: 97 EALNYTPINGKTIRIMWSHRDPSTR 121
>gi|156360993|ref|XP_001625306.1| predicted protein [Nematostella vectensis]
gi|156212133|gb|EDO33206.1| predicted protein [Nematostella vectensis]
Length = 584
Score = 516 bits (1329), Expect = e-143, Method: Compositional matrix adjust.
Identities = 281/585 (48%), Positives = 384/585 (65%), Gaps = 49/585 (8%)
Query: 27 FLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAAR 86
+ SLYVGDL +VT++ LY+ FS G VLS+RVCRDL TRRSLGY YVN+ P A +
Sbjct: 10 YPIASLYVGDLAPDVTEAMLYEKFSTAGSVLSIRVCRDLVTRRSLGYAYVNFQQPGHAEK 69
Query: 87 ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
ALD +NF P+ + RIM+ RDPS+RKSG GNIFIKNLDKSID+K+L+DTFS+FGNILS
Sbjct: 70 ALDTMNFDPIKGRPCRIMWQQRDPSLRKSGVGNIFIKNLDKSIDNKSLYDTFSAFGNILS 129
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER-ETVAIK 205
CKIA D G KG+GFV FE +++A AI +++GML+NDK+VFVG ++ K+ER E + +
Sbjct: 130 CKIAQDELGNPKGYGFVHFETEDAALEAIARVDGMLLNDKKVFVGRWMSKKERIEKMGTQ 189
Query: 206 -TKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAK 264
KF NV+VKN + DE +K+I E G I S VM D +GKSK FGFV+FE ++A +
Sbjct: 190 PKKFTNVYVKNFGDDMDDEQMKEICAEAGKIVSLKVMTDPEGKSKGFGFVSFETPEEAEE 249
Query: 265 AVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSID 324
AV LNGK+ R + G+A+K++ER E+K + E+ +E +++FQG+NLYIKNL D ID
Sbjct: 250 AVNVLNGKEIGGRRLWAGRAKKRAERAAEVKAEIEKKRQERINRFQGVNLYIKNLDDPID 309
Query: 325 DEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYV 384
DE+L+E FS +GTI+S KVM+D G SKG GFV FS+PEEA++A+ EMNG++++SKPLYV
Sbjct: 310 DERLREEFSPYGTISSAKVMKDDKGNSKGFGFVCFSSPEEATKAVTEMNGRILISKPLYV 369
Query: 385 AVAQRKEERRARLQAQFSQ----------MRP--VAMGPSVPPR--MP-------MYPPG 423
A+AQR+EER+A+L AQ RP P V PR MP M P G
Sbjct: 370 ALAQRREERKAQLAAQHMHRISGLRMHQGQRPFFTPQMPQVRPRWGMPPQQQQQQMRPTG 429
Query: 424 PSGLGQQFLYGQAPPAIIPPQ---------MPPRGHAYRYPLGRNMQDFPFDMGAGSMLP 474
+G Q Q PA +P +PP+ Y++ + +++ P AG M
Sbjct: 430 VQNMGGQAGMPQGGPAGMPRMPVQQARMGGVPPQRQPYKF--SQTVRNPP---PAGQM-- 482
Query: 475 VPVDMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKV 534
+ G GIP G P+ + LA A+P++Q+ +LGE L+PL++ D A K+
Sbjct: 483 --PEGGQGIP------GGQEPLN--PSVLAAATPQEQKQMLGERLFPLIQTNHPDMAGKI 532
Query: 535 TGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNPA 579
TGMLLE+D E+LH+LES +AL+ KV EA+ VLR+ +++ A
Sbjct: 533 TGMLLEIDNAELLHMLESRDALQMKVDEAVSVLRAHQAKESTTAA 577
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
N+F +LY+ +LD + D +L + FS G + S +V +D S G+G+V +++P +A
Sbjct: 292 NRFQGVNLYIKNLDDPIDDERLREEFSPYGTISSAKVMKD-DKGNSKGFGFVCFSSPEEA 350
Query: 85 ARALDVLNFTPLNNKSIRIMYSHR 108
+A+ +N L +K + + + R
Sbjct: 351 TKAVTEMNGRILISKPLYVALAQR 374
>gi|350408506|ref|XP_003488427.1| PREDICTED: polyadenylate-binding protein 1-like isoform 2 [Bombus
impatiens]
Length = 621
Score = 516 bits (1328), Expect = e-143, Method: Compositional matrix adjust.
Identities = 294/620 (47%), Positives = 395/620 (63%), Gaps = 91/620 (14%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL ++T++ L++ FS G VLS+RVCRD+ TRRSLGY YVN+ PADA RALD
Sbjct: 12 SLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF + + IRIM+S RDPS+RKSG GN+FIKNLDK+ID+KA++DTFS+FGNILSCK+A
Sbjct: 72 MNFDMIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVA 131
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET-VAIKTK-F 208
D SG SKG+GFV FE +E+A +ID++NGML+N K+V+VG F+ ++ERE + K K F
Sbjct: 132 QDESGVSKGYGFVHFETEEAANKSIDRVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLF 191
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NV+VKN E TD+ LK +F +YGTITS VM DGKS+ FGFV FE+ D A +AV
Sbjct: 192 TNVYVKNFGEDMTDDKLKDMFEKYGTITSHKVMIKDDGKSRGFGFVAFEDPDAAEQAVLE 251
Query: 269 LNGKKF-DDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEK 327
LNGK+ + + YVG+AQKK+ER+QELK +FEQ E ++++QG+NLY+KNL DSIDDE+
Sbjct: 252 LNGKEVAEGKCMYVGRAQKKAERQQELKRKFEQLKLERLNRYQGVNLYVKNLDDSIDDER 311
Query: 328 LKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 387
L++ F+ FGTITS KVM + G SKG GFV FS PEEA++A+ EMNG++IV+KPLYVA+A
Sbjct: 312 LRKEFAPFGTITSAKVMME-EGRSKGFGFVCFSAPEEATKAVTEMNGRIIVTKPLYVALA 370
Query: 388 QRKEERRARLQAQFSQ----MRPVAMG-------------PSVP---------------- 414
QRKE+R+A L +Q+ Q MR MG P++P
Sbjct: 371 QRKEDRKAHLASQYMQRLANMRMQQMGQIFQPGGAGNYFVPTIPQPQRFYGPAQMAQIRT 430
Query: 415 -PRMPMYP--------PGPSGLG----------------------QQFLYG-------QA 436
PR P P G SG QQ + G A
Sbjct: 431 TPRWPAQPNQVRPNAQTGSSGFATMQGPFRAAPRAPTAQPGAMRSQQTVGGANMQNRSMA 490
Query: 437 PPAI-IPPQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMP 495
PA+ + Q P + Y NM++ P M + P PV I ++ P
Sbjct: 491 GPAVGVTAQSRPSNYKYT----SNMRNPPQAMAIPA--PTPVQQAVHIQGQE-------P 537
Query: 496 ITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEA 555
+TA + LA A P++Q+ +LGE L+PL++ + K+TGMLLE+D +E+LH+LE E+
Sbjct: 538 LTA--SMLAAAPPQEQKQMLGERLFPLIQCMYPQLTGKITGMLLEIDNSELLHMLEHNES 595
Query: 556 LKAKVAEAMEVLRSVAQQQA 575
LKAKV EA+ VL++ +QA
Sbjct: 596 LKAKVEEAVAVLQAHQAKQA 615
Score = 45.4 bits (106), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
N++ +LYV +LD ++ D +L F+ G + S +V + RS G+G+V ++ P +A
Sbjct: 291 NRYQGVNLYVKNLDDSIDDERLRKEFAPFGTITSAKVM--MEEGRSKGFGFVCFSAPEEA 348
Query: 85 ARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNL 125
+A+ +N + K + + + R RK+ + +++ L
Sbjct: 349 TKAVTEMNGRIIVTKPLYVALAQRKED-RKAHLASQYMQRL 388
>gi|340719918|ref|XP_003398391.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1 [Bombus
terrestris]
Length = 630
Score = 515 bits (1327), Expect = e-143, Method: Compositional matrix adjust.
Identities = 295/629 (46%), Positives = 397/629 (63%), Gaps = 100/629 (15%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL ++T++ L++ FS G VLS+RVCRD+ TRRSLGY YVN+ PADA RALD
Sbjct: 12 SLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF + + IRIM+S RDPS+RKSG GN+FIKNLDK+ID+KA++DTFS+FGNILSCK+A
Sbjct: 72 MNFDMIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVA 131
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET-VAIKTK-F 208
D SG SKG+GFV FE +E+A +ID++NGML+N K+V+VG F+ ++ERE + K K F
Sbjct: 132 QDESGVSKGYGFVHFETEEAANKSIDRVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLF 191
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NV+VKN E TD+ LK++F +YGTITS VM DGKS+ FGFV FE+ D A +AV
Sbjct: 192 TNVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGKSRGFGFVAFEDPDAAEQAVLE 251
Query: 269 LNGKKF-DDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEK 327
LNGK+ + + YVG+AQKK+ER+QELK +FEQ E ++++QG+NLY+KNL DSIDDE+
Sbjct: 252 LNGKEVAEGKCMYVGRAQKKAERQQELKRKFEQLKLERLNRYQGVNLYVKNLDDSIDDER 311
Query: 328 LKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 387
L++ F+ FGTITS KVM + G SKG GFV FS PEEA++A+ EMNG++IV+KPLYVA+A
Sbjct: 312 LRKEFAPFGTITSAKVMME-EGRSKGFGFVCFSAPEEATKAVTEMNGRIIVTKPLYVALA 370
Query: 388 QRKEERRARLQAQFSQ----MRPVAMG-------------PSVP---------------- 414
QRKE+R+A L +Q+ Q MR MG P++P
Sbjct: 371 QRKEDRKAHLASQYMQRLANMRMQQMGQIFQPGGAGNYFVPTIPQPQRFYGPAQMAQIRT 430
Query: 415 -PRMPMYP--------PGPSGL-------------------------------GQQFLYG 434
PR P P G SG GQQ + G
Sbjct: 431 TPRWPAQPNQVRPNAQTGSSGFATMQGPFRAAPRAPTAQPGAMRSTLSARPITGQQTVGG 490
Query: 435 -------QAPPAI-IPPQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRR 486
A PA+ + Q P + Y NM++ P M + P PV I +
Sbjct: 491 ANMQSRSMAGPAVGVSAQSRPSNYKYT----SNMRNPPQAMAIPT--PTPVQQAVHIQGQ 544
Query: 487 DASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEV 546
+ P+TA + LA A P++Q+ +LGE L+PL++ + K+TGMLLE+D +E+
Sbjct: 545 E-------PLTA--SMLAAAPPQEQKQMLGERLFPLIQCMYPQLTGKITGMLLEIDNSEL 595
Query: 547 LHLLESPEALKAKVAEAMEVLRSVAQQQA 575
LH+LE E+LKAKV EA+ VL++ +QA
Sbjct: 596 LHMLEHNESLKAKVEEAVAVLQAHQAKQA 624
Score = 45.4 bits (106), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
N++ +LYV +LD ++ D +L F+ G + S +V + RS G+G+V ++ P +A
Sbjct: 291 NRYQGVNLYVKNLDDSIDDERLRKEFAPFGTITSAKVM--MEEGRSKGFGFVCFSAPEEA 348
Query: 85 ARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNL 125
+A+ +N + K + + + R RK+ + +++ L
Sbjct: 349 TKAVTEMNGRIIVTKPLYVALAQRKED-RKAHLASQYMQRL 388
>gi|380019828|ref|XP_003693803.1| PREDICTED: polyadenylate-binding protein 1-like [Apis florea]
Length = 630
Score = 515 bits (1327), Expect = e-143, Method: Compositional matrix adjust.
Identities = 295/629 (46%), Positives = 397/629 (63%), Gaps = 100/629 (15%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL ++T++ L++ FS G VLS+RVCRD+ TRRSLGY YVN+ PADA RALD
Sbjct: 12 SLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF + + IRIM+S RDPS+RKSG GN+FIKNLDK+ID+KA++DTFS+FGNILSCK+A
Sbjct: 72 MNFDMIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVA 131
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET-VAIKTK-F 208
D SG SKG+GFV FE +E+A +ID++NGML+N K+V+VG F+ ++ERE + K K F
Sbjct: 132 QDESGVSKGYGFVHFETEEAANKSIDRVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLF 191
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NV+VKN E TD+ LK++F +YGTITS VM DGKS+ FGFV FE+ D A +AV
Sbjct: 192 TNVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGKSRGFGFVAFEDPDAAEQAVLE 251
Query: 269 LNGKKF-DDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEK 327
LNGK+ + + YVG+AQKK+ER+QELK +FEQ E ++++QG+NLY+KNL DSIDDE+
Sbjct: 252 LNGKEVAEGKCMYVGRAQKKAERQQELKRKFEQLKLERLNRYQGVNLYVKNLDDSIDDER 311
Query: 328 LKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 387
L++ F+ FGTITS KVM + G SKG GFV FS PEEA++A+ EMNG++IV+KPLYVA+A
Sbjct: 312 LRKEFAPFGTITSAKVMME-EGRSKGFGFVCFSAPEEATKAVTEMNGRIIVTKPLYVALA 370
Query: 388 QRKEERRARLQAQFSQ----MRPVAMG-------------PSVP---------------- 414
QRKE+R+A L +Q+ Q MR MG P++P
Sbjct: 371 QRKEDRKAHLASQYMQRLANMRMQQMGQIFQPGGAGNYFVPTIPQPQRFYGPAQMAQIRT 430
Query: 415 -PRMPMYP--------PGPSGL-------------------------------GQQFLYG 434
PR P P G SG GQQ + G
Sbjct: 431 TPRWPAQPNQVRPNAQTGSSGFATMQGPFRAAPRAPTAQAGTMRNTLSARPITGQQAVGG 490
Query: 435 -------QAPPAI-IPPQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRR 486
A PA+ + Q P + Y NM++ P M + P PV I +
Sbjct: 491 ANMQNRSMAGPAVGVSAQSRPSNYKYT----SNMRNPPQAMAIPA--PTPVQQAVHIQGQ 544
Query: 487 DASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEV 546
+ P+TA + LA A P++Q+ +LGE L+PL++ + K+TGMLLE+D +E+
Sbjct: 545 E-------PLTA--SMLAAAPPQEQKQMLGERLFPLIQCMYPQLTGKITGMLLEIDNSEL 595
Query: 547 LHLLESPEALKAKVAEAMEVLRSVAQQQA 575
LH+LE E+LKAKV EA+ VL++ +QA
Sbjct: 596 LHMLEHNESLKAKVEEAVAVLQAHQAKQA 624
Score = 45.4 bits (106), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
N++ +LYV +LD ++ D +L F+ G + S +V + RS G+G+V ++ P +A
Sbjct: 291 NRYQGVNLYVKNLDDSIDDERLRKEFAPFGTITSAKVM--MEEGRSKGFGFVCFSAPEEA 348
Query: 85 ARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNL 125
+A+ +N + K + + + R RK+ + +++ L
Sbjct: 349 TKAVTEMNGRIIVTKPLYVALAQRKED-RKAHLASQYMQRL 388
>gi|222635819|gb|EEE65951.1| hypothetical protein OsJ_21832 [Oryza sativa Japonica Group]
Length = 710
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 285/589 (48%), Positives = 378/589 (64%), Gaps = 62/589 (10%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLS-TRRSLGYGYVNYANPADAARALD 89
SLYVGDL+ +V + QL LFSQV V S VCRD++ R+SLGYGYVN+ + DA RA++
Sbjct: 85 SLYVGDLEASVGEDQLVALFSQVAPVASAYVCRDIAGGRKSLGYGYVNFMSREDATRAME 144
Query: 90 VLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKI 149
LNFT +N K IR+M+S+RDP++RKSG N+FIKNL+ +ID+K+L++ FSSFG ILS K+
Sbjct: 145 NLNFTVVNGKPIRVMFSNRDPTLRKSGLANVFIKNLEPNIDNKSLYEMFSSFGTILSSKV 204
Query: 150 ATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFN 209
ATD +G+SKG+GF+QFE++ SA++AI+ LNGML N +++FVG F+R+QERE F
Sbjct: 205 ATDFNGKSKGYGFIQFESESSAKDAINGLNGMLANGQKIFVGLFIRRQEREHTGDANNFT 264
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEAL 269
NV+VKNL + +D DL F +G ITSA+VMRD +G S+CFGFVNFE ++ A AV+ L
Sbjct: 265 NVYVKNLPKHFSDNDLLNEFSSFGAITSAIVMRDANGLSRCFGFVNFEKSECARNAVKNL 324
Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLK 329
NGK D YV +AQKKSER+ ELK +FE + +K Q +NLY+KNL D I+DE L+
Sbjct: 325 NGKSIGDMVLYVARAQKKSERQAELKAKFEHDKNQKFEKLQTVNLYLKNLDDDINDEHLR 384
Query: 330 ELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQR 389
+LF FG + SCKVM D G SKG GFV+F+T E+A+ A+ +MNGKM+ KPLYVAVAQR
Sbjct: 385 KLFECFGEVASCKVMLDSHGRSKGCGFVSFATVEDANNAILKMNGKMVGKKPLYVAVAQR 444
Query: 390 KEERRARLQAQFSQMRPVA-MGPSVPPRMPMYPPGPSGLGQQFLYGQA------------ 436
KEER+A L A F+++R +A M P++ GP+ QF +G
Sbjct: 445 KEERKAFLAAHFARVRALATMAPTL---------GPNIAPHQFNFGHGVPALFPPPPPAG 495
Query: 437 ---PPAIIPPQM--------------PPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDM 479
P +P M PP G R+ L Q F + G
Sbjct: 496 FGFQPNFVPNMMMPYNMQRQPGQRSGPPHGGMPRH-LHNPHQMFHQNANQGFRHMPNRRN 554
Query: 480 GAGIP------RRDASVGQPM---------------PITALSTALANASPEQQRTLLGES 518
G P R +S QPM P L T+LA+A+PEQQR +LG+
Sbjct: 555 GVANPAMLHQHHRFSSPMQPMQQAVKHVVPVGELQAPSNNLQTSLASANPEQQREILGDM 614
Query: 519 LYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVL 567
L+PLVEQL + A KVTGMLLE+D+TEVL+L+ESP+ L+ KVAEAM+VL
Sbjct: 615 LFPLVEQLVNEKAYKVTGMLLELDKTEVLNLVESPDTLRDKVAEAMKVL 663
>gi|336364894|gb|EGN93247.1| hypothetical protein SERLA73DRAFT_172163 [Serpula lacrymans var.
lacrymans S7.3]
Length = 684
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 284/638 (44%), Positives = 395/638 (61%), Gaps = 99/638 (15%)
Query: 32 LYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVL 91
LYVG+LD VT++ L+++F+ +G V S+RVCRD TRRSLGY YVNY N +D RAL+ L
Sbjct: 46 LYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNTSDGERALEQL 105
Query: 92 NFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIAT 151
N++ + N++ RIM+S RDP++RK+G GNIFIKNLD+ ID+KALHDTF++FGN+LSCK+AT
Sbjct: 106 NYSLIKNRACRIMWSQRDPALRKTGQGNIFIKNLDEQIDNKALHDTFAAFGNVLSCKVAT 165
Query: 152 DGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTKFN 209
D G+SKG+GFV +E E+A+ AI +NGML+NDK+V+VG+ + ++ER++ +K +F
Sbjct: 166 DEHGRSKGYGFVHYETGEAAETAIKAVNGMLLNDKKVYVGYHISRKERQSKLDEMKAQFT 225
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEAL 269
N+++KNLD S T ++ +++F +YG +TSA+V D +G SK FGFVN+E+ ++A AV+AL
Sbjct: 226 NLYIKNLDTSVTQDEFEEMFQKYGNVTSAIVQVDEEGNSKGFGFVNYEHHEEAQSAVDAL 285
Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLK 329
+ ++ +V +AQKK+ERE+EL+ +EQA E + K+QG+NLYIKNL D +DDEKL+
Sbjct: 286 HDTDIRGKKLFVSRAQKKAEREEELRRSYEQAKMEKLSKYQGVNLYIKNLEDDVDDEKLR 345
Query: 330 ELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQR 389
F FGTITSCKVMRD SKG GFV FS+P+EA++A+AEMN KMI SKPLYV++AQR
Sbjct: 346 AEFEPFGTITSCKVMRDDKSTSKGFGFVCFSSPDEATKAVAEMNNKMIGSKPLYVSLAQR 405
Query: 390 KEERRARLQAQFSQMRPVAMGPSVPPRMP--------MYPPGPSGLGQQ----FLYGQA- 436
+E RR +L++Q +Q + M + +P YPPGP Q YGQ
Sbjct: 406 REVRRQQLESQIAQRNQIRMQQAAAAGIPGGYINGPMYYPPGPGSFPPQGRNMMGYGQPG 465
Query: 437 ---------------------PPAIIPPQ----MP--PRGHAYRYPLGRNMQDFPFDMGA 469
PP PPQ MP PRG A R P+ R P + A
Sbjct: 466 MLPPRPRYPAGNGQVPGGMPIPPYGQPPQSYGGMPGYPRGGAPRPPVARGPGSSPTNPNA 525
Query: 470 GSMLPVP-------VDMGA---GIPR------------------------------RDAS 489
P+P V+ A G P+ R+A
Sbjct: 526 ----PIPRANAPPSVNGAAARGGAPQGSVPPNRPPPAGAPAPGNRPPQGYKLNPQTRNAG 581
Query: 490 ---VGQPMPITALST----------ALANASPEQQRTLLGESLYPLVEQLERDAAAKVTG 536
VGQ P A +T ALANASP +Q+ +LGE +Y + + + A K+TG
Sbjct: 582 APPVGQTSPAQAPATQSEVPTLTAGALANASPMEQKQMLGEVIYMKIAPAQPELAGKITG 641
Query: 537 MLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQ 574
MLLEMD E+LHLLESP+++ KV EA+ VL + +
Sbjct: 642 MLLEMDNAELLHLLESPDSMAGKVNEALAVLHDFTKDE 679
>gi|126330207|ref|XP_001365338.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Monodelphis
domestica]
Length = 614
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 285/600 (47%), Positives = 385/600 (64%), Gaps = 60/600 (10%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
+ + + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ PA
Sbjct: 4 AASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPA 63
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
DA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+FG
Sbjct: 64 DAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET- 201
NILSCK+ D +G SKG+ FV FE +++A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 124 NILSCKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Query: 202 VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
+ K K F NV++KN + D LK++F +YG S VM D GKSK FGFV+FE +
Sbjct: 183 LGAKAKEFTNVYIKNFGDDMDDGRLKELFSKYGKTLSVKVMTDPSGKSKGFGFVSFEKHE 242
Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
DA KAVE +NGK + + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL
Sbjct: 243 DANKAVEEMNGKDINGKMVFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLD 302
Query: 321 DSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSK 380
D+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+P+EA++A+ EMNG+++ SK
Sbjct: 303 DTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPDEATKAVTEMNGRIVGSK 361
Query: 381 PLYVAVAQRKEERRARLQAQF----------------SQMRPVAMG---PSVPP---RMP 418
PLYVA+AQRKEER+A L Q+ +Q +P G P+VP R P
Sbjct: 362 PLYVALAQRKEERKAHLTNQYMQRIAGMRALPANTIINQFQPTPGGYFMPAVPQAQNRPP 421
Query: 419 MYPPG----------------PSGL----------GQQFLYGQAPPAIIPP---QMPPRG 449
Y P P G G + PA +P + PR
Sbjct: 422 YYAPNQIAQMRPNPRWQQGGRPQGFQGVPNTIRQSGPRPALRHLTPARVPTAVQNLSPRP 481
Query: 450 HAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALSTALANASPE 509
+ P R + P+ A P P P+ V P+TA + LA A P+
Sbjct: 482 -SVATPAPRAVP--PYKYAANVRSPHPAIQPLQTPQPAVHVQGQEPLTA--SMLAAAPPQ 536
Query: 510 QQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRS 569
+Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+LESPE+L++KV EA+ VL++
Sbjct: 537 EQKQMLGERLFPLIQTMHNNLAGKITGMLLEIDNSELLHMLESPESLRSKVEEAVAVLQA 596
>gi|350408504|ref|XP_003488426.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1 [Bombus
impatiens]
Length = 630
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 295/629 (46%), Positives = 396/629 (62%), Gaps = 100/629 (15%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL ++T++ L++ FS G VLS+RVCRD+ TRRSLGY YVN+ PADA RALD
Sbjct: 12 SLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF + + IRIM+S RDPS+RKSG GN+FIKNLDK+ID+KA++DTFS+FGNILSCK+A
Sbjct: 72 MNFDMIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVA 131
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET-VAIKTK-F 208
D SG SKG+GFV FE +E+A +ID++NGML+N K+V+VG F+ ++ERE + K K F
Sbjct: 132 QDESGVSKGYGFVHFETEEAANKSIDRVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLF 191
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NV+VKN E TD+ LK +F +YGTITS VM DGKS+ FGFV FE+ D A +AV
Sbjct: 192 TNVYVKNFGEDMTDDKLKDMFEKYGTITSHKVMIKDDGKSRGFGFVAFEDPDAAEQAVLE 251
Query: 269 LNGKKF-DDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEK 327
LNGK+ + + YVG+AQKK+ER+QELK +FEQ E ++++QG+NLY+KNL DSIDDE+
Sbjct: 252 LNGKEVAEGKCMYVGRAQKKAERQQELKRKFEQLKLERLNRYQGVNLYVKNLDDSIDDER 311
Query: 328 LKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 387
L++ F+ FGTITS KVM + G SKG GFV FS PEEA++A+ EMNG++IV+KPLYVA+A
Sbjct: 312 LRKEFAPFGTITSAKVMME-EGRSKGFGFVCFSAPEEATKAVTEMNGRIIVTKPLYVALA 370
Query: 388 QRKEERRARLQAQFSQ----MRPVAMG-------------PSVP---------------- 414
QRKE+R+A L +Q+ Q MR MG P++P
Sbjct: 371 QRKEDRKAHLASQYMQRLANMRMQQMGQIFQPGGAGNYFVPTIPQPQRFYGPAQMAQIRT 430
Query: 415 -PRMPMYP--------PGPSGL-------------------------------GQQFLYG 434
PR P P G SG GQQ + G
Sbjct: 431 TPRWPAQPNQVRPNAQTGSSGFATMQGPFRAAPRAPTAQPGAMRSTLSARPITGQQTVGG 490
Query: 435 -------QAPPAI-IPPQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRR 486
A PA+ + Q P + Y NM++ P M + P PV I +
Sbjct: 491 ANMQNRSMAGPAVGVTAQSRPSNYKYT----SNMRNPPQAMAIPA--PTPVQQAVHIQGQ 544
Query: 487 DASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEV 546
+ P+TA + LA A P++Q+ +LGE L+PL++ + K+TGMLLE+D +E+
Sbjct: 545 E-------PLTA--SMLAAAPPQEQKQMLGERLFPLIQCMYPQLTGKITGMLLEIDNSEL 595
Query: 547 LHLLESPEALKAKVAEAMEVLRSVAQQQA 575
LH+LE E+LKAKV EA+ VL++ +QA
Sbjct: 596 LHMLEHNESLKAKVEEAVAVLQAHQAKQA 624
Score = 45.4 bits (106), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
N++ +LYV +LD ++ D +L F+ G + S +V + RS G+G+V ++ P +A
Sbjct: 291 NRYQGVNLYVKNLDDSIDDERLRKEFAPFGTITSAKVM--MEEGRSKGFGFVCFSAPEEA 348
Query: 85 ARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNL 125
+A+ +N + K + + + R RK+ + +++ L
Sbjct: 349 TKAVTEMNGRIIVTKPLYVALAQRKED-RKAHLASQYMQRL 388
>gi|50725435|dbj|BAD32907.1| putative polyadenylate-binding protein [Oryza sativa Japonica
Group]
Length = 670
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 285/589 (48%), Positives = 378/589 (64%), Gaps = 62/589 (10%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLS-TRRSLGYGYVNYANPADAARALD 89
SLYVGDL+ +V + QL LFSQV V S VCRD++ R+SLGYGYVN+ + DA RA++
Sbjct: 61 SLYVGDLEASVGEDQLVALFSQVAPVASAYVCRDIAGGRKSLGYGYVNFMSREDATRAME 120
Query: 90 VLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKI 149
LNFT +N K IR+M+S+RDP++RKSG N+FIKNL+ +ID+K+L++ FSSFG ILS K+
Sbjct: 121 NLNFTVVNGKPIRVMFSNRDPTLRKSGLANVFIKNLEPNIDNKSLYEMFSSFGTILSSKV 180
Query: 150 ATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFN 209
ATD +G+SKG+GF+QFE++ SA++AI+ LNGML N +++FVG F+R+QERE F
Sbjct: 181 ATDFNGKSKGYGFIQFESESSAKDAINGLNGMLANGQKIFVGLFIRRQEREHTGDANNFT 240
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEAL 269
NV+VKNL + +D DL F +G ITSA+VMRD +G S+CFGFVNFE ++ A AV+ L
Sbjct: 241 NVYVKNLPKHFSDNDLLNEFSSFGAITSAIVMRDANGLSRCFGFVNFEKSECARNAVKNL 300
Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLK 329
NGK D YV +AQKKSER+ ELK +FE + +K Q +NLY+KNL D I+DE L+
Sbjct: 301 NGKSIGDMVLYVARAQKKSERQAELKAKFEHDKNQKFEKLQTVNLYLKNLDDDINDEHLR 360
Query: 330 ELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQR 389
+LF FG + SCKVM D G SKG GFV+F+T E+A+ A+ +MNGKM+ KPLYVAVAQR
Sbjct: 361 KLFECFGEVASCKVMLDSHGRSKGCGFVSFATVEDANNAILKMNGKMVGKKPLYVAVAQR 420
Query: 390 KEERRARLQAQFSQMRPVA-MGPSVPPRMPMYPPGPSGLGQQFLYGQA------------ 436
KEER+A L A F+++R +A M P++ GP+ QF +G
Sbjct: 421 KEERKAFLAAHFARVRALATMAPTL---------GPNIAPHQFNFGHGVPALFPPPPPAG 471
Query: 437 ---PPAIIPPQM--------------PPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDM 479
P +P M PP G R+ L Q F + G
Sbjct: 472 FGFQPNFVPNMMMPYNMQRQPGQRSGPPHGGMPRH-LHNPHQMFHQNANQGFRHMPNRRN 530
Query: 480 GAGIP------RRDASVGQPM---------------PITALSTALANASPEQQRTLLGES 518
G P R +S QPM P L T+LA+A+PEQQR +LG+
Sbjct: 531 GVANPAMLHQHHRFSSPMQPMQQAVKHVVPVGELQAPSNNLQTSLASANPEQQREILGDM 590
Query: 519 LYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVL 567
L+PLVEQL + A KVTGMLLE+D+TEVL+L+ESP+ L+ KVAEAM+VL
Sbjct: 591 LFPLVEQLVNEKAYKVTGMLLELDKTEVLNLVESPDTLRDKVAEAMKVL 639
>gi|383862667|ref|XP_003706805.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1
[Megachile rotundata]
Length = 630
Score = 513 bits (1322), Expect = e-143, Method: Compositional matrix adjust.
Identities = 295/629 (46%), Positives = 395/629 (62%), Gaps = 100/629 (15%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL ++T++ L++ FS G VLS+RVCRD+ TRRSLGY YVN+ PADA RALD
Sbjct: 12 SLYVGDLHADITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF + + IRIM+S RDPS+RKSG GN+FIKNLDK+ID+KA++DTFS+FGNILSCK+A
Sbjct: 72 MNFDMIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVA 131
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET-VAIKTK-F 208
D SG SKG+GFV FE +E+A +IDK+NGML+N K+V+VG F+ ++ERE + K K F
Sbjct: 132 QDESGVSKGYGFVHFETEEAANKSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLF 191
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NV+VKN E TD+ LK++F +YGTITS VM DGKS+ FGFV FE+ D A +AV
Sbjct: 192 TNVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGKSRGFGFVAFEDPDAAEQAVLE 251
Query: 269 LNGKKF-DDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEK 327
LNGK+ + + YVG+AQKK+ER+QELK +FEQ E + ++QG+NLY+KNL DSI+DE+
Sbjct: 252 LNGKEVAEGKCMYVGRAQKKAERQQELKRKFEQLKLERLSRYQGVNLYVKNLDDSINDER 311
Query: 328 LKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 387
L+ F+ FGTITS KVM + G SKG GFV FS PEEA++A+ EMNG++IV+KPLYVA+A
Sbjct: 312 LRREFAPFGTITSAKVMME-DGRSKGFGFVCFSAPEEATKAVTEMNGRIIVTKPLYVALA 370
Query: 388 QRKEERRARLQAQFSQ----MRPVAMG-------------PSVP---------------- 414
QRKE+R+A L +Q+ Q MR MG P++P
Sbjct: 371 QRKEDRKAHLASQYMQRLANMRMQQMGQMFPPGGAGNYFVPTIPQPQRFYGPAQMAQIRA 430
Query: 415 -PRMPMYP--------PGPSGL-------------------------------GQQFLYG 434
PR P P G SG GQQ + G
Sbjct: 431 TPRWPAQPNQVRPNAQTGNSGFATMQGPFRTTPRAPTAQAGTMRSTLSARPITGQQAVGG 490
Query: 435 -------QAPPAI-IPPQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRR 486
A PA+ + Q P + Y NM++ P M + P PV I +
Sbjct: 491 ANMQSRSMAGPAVGVSAQSRPSNYKYT----SNMRNPPQAMAIPA--PTPVQQAVHIQGQ 544
Query: 487 DASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEV 546
+ P+TA + LA A P++Q+ +LGE L+PL++ + K+TGMLLE+D +E+
Sbjct: 545 E-------PLTA--SMLAAAPPQEQKQMLGERLFPLIQCMYPQLTGKITGMLLEIDNSEL 595
Query: 547 LHLLESPEALKAKVAEAMEVLRSVAQQQA 575
LH+LE E+LKAKV EA+ VL++ +QA
Sbjct: 596 LHMLEHNESLKAKVEEAVAVLQAHQAKQA 624
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
+++ +LYV +LD ++ D +L F+ G + S +V + RS G+G+V ++ P +A
Sbjct: 291 SRYQGVNLYVKNLDDSINDERLRREFAPFGTITSAKVM--MEDGRSKGFGFVCFSAPEEA 348
Query: 85 ARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNL 125
+A+ +N + K + + + R RK+ + +++ L
Sbjct: 349 TKAVTEMNGRIIVTKPLYVALAQRKED-RKAHLASQYMQRL 388
>gi|693937|emb|CAA88401.1| polyadenylate binding protein II [Homo sapiens]
Length = 522
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 272/537 (50%), Positives = 365/537 (67%), Gaps = 29/537 (5%)
Query: 46 LYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMY 105
LY+ FS G +LS+RVCRD+ TRRSLGY YVN+ PADA RALD +NF + K +RIM+
Sbjct: 2 LYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMW 61
Query: 106 SHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQF 165
S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FGNILSCK+ D +G SKG+GFV F
Sbjct: 62 SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHF 120
Query: 166 ENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTKFNNVFVKNLDESTTDE 223
E +E+A+ AI+K+NGML+ND++VFVG F ++ERE A +F NV++KN E DE
Sbjct: 121 ETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDE 180
Query: 224 DLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGK 283
LK +FG++G S VM D GKSK FGFV+FE +DA KAV+ +NGK+ + ++ YVG+
Sbjct: 181 RLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGR 240
Query: 284 AQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKV 343
AQKK ER+ ELK +FEQ ++ + ++QG+NLY+KNL D IDDE+L++ FS FGTITS KV
Sbjct: 241 AQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKV 300
Query: 344 MRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQ 403
M + G SKG GFV FS+PEEA++A+ EMNG+++ +KPLYVA+AQRKEER+A L Q+ Q
Sbjct: 301 MME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQ 359
Query: 404 MRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPPQMPPRGHAYRYPLGRNMQDF 463
P P P PSG F+ A IP + A YP + Q
Sbjct: 360 RMASVRAVPNPVINPYQPAPPSGY---FI------AAIPQT---QNRAAYYPPSQIAQ-- 405
Query: 464 PFDMGAGSMLPVPVDMGAGI-PRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPL 522
+ P P G P V P+TA + LA+A P++Q+ +LGE L+PL
Sbjct: 406 --------LRPSPRWTAQGARPHPAVHVQGQEPLTA--SMLASAPPQEQKQMLGERLFPL 455
Query: 523 VEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNPA 579
++ + A K+TGMLLE+D +E+LH+LESPE+L++KV EA+ VL++ ++A A
Sbjct: 456 IQAMHPTLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHQAKEAAQKA 512
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 115/291 (39%), Positives = 170/291 (58%), Gaps = 23/291 (7%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ +LD ++ + LYD FS G +LS +V D + S GYG+V++ A RA++
Sbjct: 75 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEK 132
Query: 91 LNFTPLNNKSIRI----MYSHRDPSI--RKSGTGNIFIKNLDKSIDHKALHDTFSSFGNI 144
+N LN++ + + R+ + R N++IKN + +D + L D F FG
Sbjct: 133 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPA 192
Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAI 204
LS K+ TD SG+SKGFGFV FE E AQ A+D++NG +N KQ++VG +K ER+T +
Sbjct: 193 LSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQT-EL 251
Query: 205 KTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCF 251
K KF N++VKNLD+ DE L+K F +GTITSA VM +G G+SK F
Sbjct: 252 KRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG-GRSKGF 310
Query: 252 GFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAM 302
GFV F + ++A KAV +NG+ + YV AQ+K ER+ L Q+ Q M
Sbjct: 311 GFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRM 361
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 107/197 (54%), Gaps = 22/197 (11%)
Query: 21 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYAN 80
GA +F T++Y+ + ++ D +L DLF + G LSV+V D S +S G+G+V++
Sbjct: 159 GARAKEF--TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESG-KSKGFGFVSFER 215
Query: 81 PADAARALDVLNFTPLNNKSIRIMYSHR-----------------DPSIRKSGTGNIFIK 123
DA +A+D +N LN K I + + + D R G N+++K
Sbjct: 216 HEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGV-NLYVK 274
Query: 124 NLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLI 183
NLD ID + L FS FG I S K+ +G G+SKGFGFV F + E A A+ ++NG ++
Sbjct: 275 NLDDGIDDERLRKEFSPFGTITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTEMNGRIV 333
Query: 184 NDKQVFVGHFLRKQERE 200
K ++V RK+ER+
Sbjct: 334 ATKPLYVALAQRKEERQ 350
>gi|389608229|dbj|BAM17726.1| polyA-binding protein [Papilio xuthus]
Length = 619
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 287/612 (46%), Positives = 401/612 (65%), Gaps = 59/612 (9%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL ++T++ L++ FS G VLS+RVCRD+ TRRSLGY YVN+ PADA RAL+
Sbjct: 12 SLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALEG 71
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF + + IRIM+S RDPS+RKSG GN+FIKNLDK+ID+KA++DTF++FGNILSCK+A
Sbjct: 72 MNFDIIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKTIDNKAMYDTFTAFGNILSCKVA 131
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET-VAIKTK-F 208
D +G SKG+GFV FE +E+A +I+K+NGML+N K+V+VG F+ ++ERE + K K F
Sbjct: 132 QDETGASKGYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREKELGEKAKLF 191
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NV+VKN E +DE L+++F +YG ITS VM DG S+ FGFV FE+ D A +A
Sbjct: 192 TNVYVKNFGEDFSDEMLREMFEKYGRITSHKVMYKEDGSSRGFGFVAFEDPDAAERACME 251
Query: 269 LNGKKF-DDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEK 327
LNGK+ + + YVG+AQKK+ER++ELK +FEQ E + ++QG+NLY+KNL D+IDDE+
Sbjct: 252 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 311
Query: 328 LKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 387
L++ F+ FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +KPLYVA+A
Sbjct: 312 LRKEFAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALA 370
Query: 388 QRKEERRARLQAQFSQ----MRPVAMG-------------PSVPP--------RMPMYPP 422
QRKE+R+A L +Q+ Q MR MG P++PP +M P
Sbjct: 371 QRKEDRKAHLTSQYMQRMASMRMQQMGQIFQPGGTGGYFVPTIPPAQRFYGPAQMTQIRP 430
Query: 423 GPSGLGQQFLY------GQAPPAIIPPQMP-PRGHAYRYPLGRNMQDFPFD----MGAGS 471
P Q + A P + PP P PRG A + L +M P + S
Sbjct: 431 SPRWTAQPAVRPNAQSAASAYPNMQPPFRPAPRGPA-QAALRSSMGARPITGQQGVATAS 489
Query: 472 MLPVPVDMGAGIP--------RRDASVGQPM-------PITALSTALANASPEQQRTLLG 516
+ P+ +G P R+ QP P+T +T LA A ++Q+ +LG
Sbjct: 490 SIRAPIVPQSGRPAGYKYTSNMRNPPAPQPAVHIQGQEPLT--TTMLAAAPLQEQKQMLG 547
Query: 517 ESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQAN 576
E L+PL++++ D A K+TGMLLE+D +E+LH+LE E+LKAKV EA+ VL++ +Q
Sbjct: 548 ERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHGESLKAKVDEAVAVLQAHQAKQQA 607
Query: 577 NPADQLASLSLN 588
D++A L +N
Sbjct: 608 TKKDEVA-LKIN 618
>gi|125555900|gb|EAZ01506.1| hypothetical protein OsI_23538 [Oryza sativa Indica Group]
Length = 669
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 284/589 (48%), Positives = 377/589 (64%), Gaps = 62/589 (10%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLS-TRRSLGYGYVNYANPADAARALD 89
SLYVGDL+ +V + QL LFSQV V S VCRD++ +SLGYGYVN+ + DA RA++
Sbjct: 62 SLYVGDLEASVGEDQLVALFSQVAPVASAYVCRDIAGGSKSLGYGYVNFMSREDATRAME 121
Query: 90 VLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKI 149
LNFT +N K IR+M+S+RDP++RKSG N+FIKNL+ +ID+K+L++ FSSFG ILS K+
Sbjct: 122 NLNFTVVNGKPIRVMFSNRDPTLRKSGLANVFIKNLEPNIDNKSLYEMFSSFGTILSSKV 181
Query: 150 ATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFN 209
ATD +G+SKG+GF+QFE++ SA++AI+ LNGML N +++FVG F+R+QERE F
Sbjct: 182 ATDFNGKSKGYGFIQFESESSAKDAINGLNGMLANGQKIFVGLFIRRQEREHTGDANNFT 241
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEAL 269
NV+VKNL + +D DL F +G ITSA+VMRD +G S+CFGFVNFE ++ A AV+ L
Sbjct: 242 NVYVKNLPKHFSDNDLLNEFSSFGAITSAIVMRDANGLSRCFGFVNFEKSECARNAVKNL 301
Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLK 329
NGK D YV +AQKKSER+ ELK +FE + +K Q +NLY+KNL D I+DE L+
Sbjct: 302 NGKSIGDMVLYVARAQKKSERQAELKAKFEHDKNQKFEKLQTVNLYLKNLDDDINDEHLR 361
Query: 330 ELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQR 389
+LF FG + SCKVM D G SKG GFV+F+T E+A+ A+ +MNGKM+ KPLYVAVAQR
Sbjct: 362 KLFECFGEVASCKVMLDSHGRSKGCGFVSFATVEDANNAILKMNGKMVGKKPLYVAVAQR 421
Query: 390 KEERRARLQAQFSQMRPVA-MGPSVPPRMPMYPPGPSGLGQQFLYGQA------------ 436
KEER+A L A F+++R +A M P++ GP+ QF +G
Sbjct: 422 KEERKAFLAAHFARVRALATMAPTL---------GPNIAPHQFNFGHGVPALFPPPPPAG 472
Query: 437 ---PPAIIPPQM--------------PPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDM 479
P +P M PP G R+ L Q F + G
Sbjct: 473 FGFQPNFVPNMMMPYNMQRQPGQRSGPPHGGMPRH-LHNPHQMFHQNANQGFRHMPNRRN 531
Query: 480 GAGIP------RRDASVGQPM---------------PITALSTALANASPEQQRTLLGES 518
G P R +S QPM P L T+LA+A+PEQQR +LG+
Sbjct: 532 GVANPAMLHQHHRFSSPMQPMQQAVKHVVPVGELQAPSNNLQTSLASANPEQQREILGDM 591
Query: 519 LYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVL 567
L+PLVEQL + A KVTGMLLE+D+TEVL+L+ESP+ L+ KVAEAM+VL
Sbjct: 592 LFPLVEQLVNEKAYKVTGMLLELDKTEVLNLVESPDTLRDKVAEAMKVL 640
>gi|332374002|gb|AEE62142.1| unknown [Dendroctonus ponderosae]
Length = 634
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 289/625 (46%), Positives = 396/625 (63%), Gaps = 86/625 (13%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL ++T++ L+D FS G VLS+RVCRDL TRRSLGY YVN+ PADA RALD
Sbjct: 12 SLYVGDLHSDITEAMLFDKFSSAGPVLSIRVCRDLITRRSLGYAYVNFQQPADAERALDT 71
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF + + IRIM+S RDPS+RKSG GN+FIKNLD+SID+KA++DTFS+FGNILSCK+A
Sbjct: 72 MNFDLIRGRPIRIMWSQRDPSLRKSGVGNVFIKNLDRSIDNKAMYDTFSAFGNILSCKVA 131
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET-VAIKTK-F 208
D +G SKG+GFV FE +E+A +I+K+NGML+N K+V+VG F+ ++ERE + K K F
Sbjct: 132 QDENGTSKGYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREKELGEKAKLF 191
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NV+VKN E ++E L+ +F ++G ITS VM DGKSK FGFV FE+ + A AV+A
Sbjct: 192 TNVYVKNFGEDLSEEQLRNMFEKFGKITSYKVMSKDDGKSKGFGFVAFESPEAAETAVDA 251
Query: 269 LNGKKF-DDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEK 327
LNGK+ + + YVG+AQKK+ER+QELK +FE E ++++QG+NLY+KNL D+IDDE+
Sbjct: 252 LNGKELVEGKPLYVGRAQKKAERQQELKRRFEALKMERLNRYQGVNLYVKNLDDTIDDER 311
Query: 328 LKELFSEFGTITSCKVMRDPSGI-------SKGSGFVAFSTPEEASRALAEMNGKMIVSK 380
L++ F+ FGTITS KVM + + SKG GFV FS+PEEA++A+ EMNG+++ SK
Sbjct: 312 LRKEFAPFGTITSAKVMIEENKTESFITTRSKGFGFVCFSSPEEATKAVTEMNGRIVGSK 371
Query: 381 PLYVAVAQRKEERRARLQAQFSQ----MRPVAMG-------------PSVP--------- 414
PLYVA+AQRKE+R+A L +Q+ Q MR MG P++P
Sbjct: 372 PLYVALAQRKEDRKAHLTSQYMQRMANMRMHQMGHQFMPPGPSSYFVPTIPTAQRYFTGG 431
Query: 415 ---------PRM----PMYPPGPSGLGQQFLYGQAPPAIIPPQMP------------PRG 449
PR P+ PG G ++ P+ PP P PR
Sbjct: 432 TQLTPIRSNPRWAAQTPIR-PGAQGGTAAYMANSYRPSARPPNQPMAMRNNIGLGNVPRP 490
Query: 450 HAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQP------MPITAL---- 499
+ P NMQ P AG + V A + +++ P MP T +
Sbjct: 491 ITGQQP--PNMQGRPL---AGQQVVVATGSRAATFKYTSNMRNPPQAMGTMPATPVQQAV 545
Query: 500 ---------STALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLL 550
+T LA A P++Q+ +LGE L+PL++++ D A K+TGMLLE+D TE+LH+L
Sbjct: 546 HIQGQEPLTATMLAAAQPQEQKQMLGERLFPLIQRMYADLAGKITGMLLEIDNTELLHML 605
Query: 551 ESPEALKAKVAEAMEVLRSVAQQQA 575
E E+LK KV EA+ VL++ +QA
Sbjct: 606 EHNESLKNKVEEAVAVLQAHQAKQA 630
Score = 45.8 bits (107), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 58/117 (49%), Gaps = 7/117 (5%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRV------CRDLSTRRSLGYGYVNY 78
N++ +LYV +LD + D +L F+ G + S +V T RS G+G+V +
Sbjct: 291 NRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMIEENKTESFITTRSKGFGFVCF 350
Query: 79 ANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALH 135
++P +A +A+ +N + +K + + + R RK+ + +++ + H+ H
Sbjct: 351 SSPEEATKAVTEMNGRIVGSKPLYVALAQRKED-RKAHLTSQYMQRMANMRMHQMGH 406
>gi|389610655|dbj|BAM18939.1| polyA-binding protein [Papilio polytes]
Length = 611
Score = 510 bits (1313), Expect = e-142, Method: Compositional matrix adjust.
Identities = 286/601 (47%), Positives = 397/601 (66%), Gaps = 59/601 (9%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL ++T++ L++ FS G VLS+RVCRD+ TRRSLGY YVN+ PADA RAL+
Sbjct: 12 SLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALEG 71
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF + + IRIM+S RDPS+RKSG GN+FIKNLDK+ID+KA++DTFS+FGNILSCK+A
Sbjct: 72 MNFDIIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKTIDNKAMYDTFSAFGNILSCKVA 131
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET-VAIKTK-F 208
D +G SKG+GFV FE +E+A +I+K+NGML+N K+V+VG F+ ++ERE + K K F
Sbjct: 132 QDETGASKGYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREKELGEKAKLF 191
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NV+VKN E +DE L+++F +YG ITS VM DG S+ FGFV FE+ D A +A
Sbjct: 192 TNVYVKNFGEDFSDEMLREMFEKYGRITSHKVMYKEDGSSRGFGFVAFEDPDAAERACME 251
Query: 269 LNGKKF-DDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEK 327
LNGK+ + + YVG+AQKK+ER++ELK +FEQ E + ++QG+NLY+KNL D+IDDE+
Sbjct: 252 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 311
Query: 328 LKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 387
L++ F+ FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +KPLYVA+A
Sbjct: 312 LRKEFAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALA 370
Query: 388 QRKEERRARLQAQFSQ----MRPVAMG-------------PSVPP--------RMPMYPP 422
QRKE+R+A L +Q+ Q MR MG P++PP +M P
Sbjct: 371 QRKEDRKAHLTSQYMQRMASMRMQQMGQIFQPGGTGGYFVPTIPPAQRFYGPAQMTQIRP 430
Query: 423 GPSGLGQQFLY------GQAPPAIIPPQMP-PRGHAYRYPLGRNMQDFPFD----MGAGS 471
P Q + A P + PP P PRG A + L +M P + +
Sbjct: 431 SPRWTAQPAVRPNAQSAASAYPNMQPPFRPAPRGPA-QAALRSSMGARPITGQQGVATAA 489
Query: 472 MLPVPVDMGAGIP--------RRDASVGQPM-------PITALSTALANASPEQQRTLLG 516
+ P+ +G P R+ QP P+T +T LA A ++Q+ +LG
Sbjct: 490 SIRAPIVPQSGRPAGYKYTSNMRNPPAPQPAVHIQGQEPLT--TTMLAAAPLQEQKQMLG 547
Query: 517 ESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRS-VAQQQA 575
E L+PL++++ D A K+TGMLLE+D +E+LH+LE E+LKAKV EA+ VL++ A+QQA
Sbjct: 548 ERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHGESLKAKVDEAVAVLQAHQAKQQA 607
Query: 576 N 576
Sbjct: 608 T 608
>gi|328852276|gb|EGG01423.1| hypothetical protein MELLADRAFT_39080 [Melampsora larici-populina
98AG31]
Length = 701
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 292/636 (45%), Positives = 388/636 (61%), Gaps = 101/636 (15%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
TSLYVG+LD VT++ LY++FS +G V S+RVCRD TRRSLGY YVNY N ADA RAL+
Sbjct: 57 TSLYVGELDPTVTEAMLYEIFSMIGPVSSIRVCRDAVTRRSLGYAYVNYLNAADAERALE 116
Query: 90 VLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKI 149
LN++ + NK+ RIM+S RDPS+RK+G GNIFIKNLD++ID+KALHDTF++FG+ILSCK+
Sbjct: 117 QLNYSLIKNKACRIMWSQRDPSLRKTGQGNIFIKNLDETIDNKALHDTFAAFGDILSCKV 176
Query: 150 ATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTK 207
A D +G SKG+GFV + ESA+ AI +NGM +NDK VFVG + ++ER+ ++
Sbjct: 177 AMDSTGASKGYGFVHYVTAESAEAAIKGVNGMQLNDKVVFVGIHVPRRERQAKIDEVRAH 236
Query: 208 FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVE 267
F N+++KNL T E+L ++F +YG +TSA V D GK + FGFVN+EN + A+KAVE
Sbjct: 237 FTNLYIKNLPTEVTTEELNEMFSKYGPVTSAAVQADESGKHRGFGFVNYENHESASKAVE 296
Query: 268 ALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEK 327
AL+ K + YV +AQK+ ER+ EL+ EQ ET K+QG+NLYIKNL D DDEK
Sbjct: 297 ALHDKDYKGNILYVARAQKRVERDAELRRAHEQQKYETTLKYQGVNLYIKNLDDEYDDEK 356
Query: 328 LKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 387
L+ F FGTITSCKVM+D G+S+G GFV FS P+EA++A+AEMNGKM+ SKPLYV++A
Sbjct: 357 LQAEFLPFGTITSCKVMKDDKGVSRGFGFVCFSAPDEATKAVAEMNGKMLGSKPLYVSLA 416
Query: 388 QRKEERRARLQAQFS---QMR------------PVAMGP---------SVPP--RMPMYP 421
QRK+ R+ +L+AQ S QMR P P + PP R YP
Sbjct: 417 QRKDVRKQQLEAQMSQRAQMRSQQIAAAGIPGAPYGAPPNQMYYGGAAAYPPPGRGMAYP 476
Query: 422 PG--PSGLGQQFLYGQAPPAIIPPQ--------MPPRGHAYRYPLGRNM---QDFPFDMG 468
P P+G+ + Y APP +PP PP+G+ YP G D + G
Sbjct: 477 PNGMPAGMPPRPRY--APPGQMPPMGMPGAPHYQPPQGYP-GYPAGDPAFPGADHAYPAG 533
Query: 469 -----------AGSM------------------------------LPVPVDMGAGIPR-R 486
AGSM +P M P+ R
Sbjct: 534 DPGYPAGGPAPAGSMRGMPGPPGGPAPAGFRGPGGPNGPPIGRNGMPPAGGMRGAPPQSR 593
Query: 487 DASVGQP--------------MPITALS-TALANASPEQQRTLLGESLYPLVEQLERDAA 531
D + QP P T LS ALA ASP +Q+ +LGE+LYP + + + + A
Sbjct: 594 DPAYHQPSTLSGRATSHRAPEAPQTGLSPAALAKASPAEQKQMLGEALYPQIAEKQPEKA 653
Query: 532 AKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVL 567
K+TGM+LE+D E+LHLLE+ AL AKV+EA++VL
Sbjct: 654 GKITGMILEIDNAELLHLLENTTALDAKVSEAVQVL 689
>gi|444706907|gb|ELW48224.1| Polyadenylate-binding protein 4 [Tupaia chinensis]
Length = 692
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 287/629 (45%), Positives = 386/629 (61%), Gaps = 95/629 (15%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+ + + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G SKG+ FV FE +E+A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 202 -VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ K K F NV++KN E DE LK++F ++G S VMRD GKSK FGFV++E
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPTGKSKGFGFVSYEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAVE +NGK+ + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL
Sbjct: 242 EDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ S
Sbjct: 302 DDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 380 KPLYVAVAQRKEERRARLQAQF----------------SQMRPVAMG---PSVPPRMP-- 418
KPLYVA+AQRKEER+A L Q+ +Q +P A G P+VP P
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQPGPWS 420
Query: 419 ---------MYPPGPSGLGQQFLYGQAPPAIIPPQMPPRGHAYRYPLGRNM--------- 460
+ PPG G+ Q+ P + P G+A P R +
Sbjct: 421 ASLVSDEQCLSPPGFQGMPSAIR--QSGPRPTLRHLAPTGNA---PASRGLPTTTQRVGS 475
Query: 461 -------QDFPFDMGAGSMLPVPVDMGAGIP-----------------------RRDASV 490
DF A L G G+P + +SV
Sbjct: 476 ECPDRLAMDFGGAGAAQQGLTDSCQSGGGVPTAVQNLAPRAAVAAPAPRAVAPYKYASSV 535
Query: 491 GQPMPIT----------------ALSTALANASPEQ-QRTLLGESLYPLVEQLERDAAAK 533
P P L+ ++ A+P Q Q+ +LGE L+PL++ + + A K
Sbjct: 536 RSPHPAIQPLQAPQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGK 595
Query: 534 VTGMLLEMDQTEVLHLLESPEALKAKVAE 562
+TGMLLE+D +E+LH+LESPE+L++KV+E
Sbjct: 596 ITGMLLEIDNSELLHMLESPESLRSKVSE 624
>gi|325182450|emb|CCA16902.1| polyadenylatebinding protein putative [Albugo laibachii Nc14]
Length = 675
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 296/626 (47%), Positives = 388/626 (61%), Gaps = 89/626 (14%)
Query: 18 VAAGASG--NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGY 75
AA SG F T SLYVGD+ +VT++ L+++F+ VG V S+RVCRD TRRSLGY Y
Sbjct: 62 TAASVSGPVQPFQTASLYVGDIHPDVTEALLFEIFNAVGPVASIRVCRDAVTRRSLGYAY 121
Query: 76 VNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALH 135
VN+ N DA RALD +NFT + RIM+S RDPS+RKSG GNIF+KNLD SID+KAL+
Sbjct: 122 VNFHNLVDAERALDTMNFTCIKGVPCRIMWSQRDPSLRKSGVGNIFVKNLDPSIDNKALY 181
Query: 136 DTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLR 195
DTFS FGNILSCK+A D +GQSKG+G+V +E E+A AI+K+NGMLI +VFVGHF +
Sbjct: 182 DTFSLFGNILSCKVANDPTGQSKGYGYVHYETAEAATEAINKINGMLIAGTEVFVGHFQK 241
Query: 196 KQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKS-KCFGFV 254
+QER + + N +VKNL TD DL++ F +G + SAVVM+D + + + FGFV
Sbjct: 242 RQERPDI---EDWTNCYVKNLPTQWTDADLRREFEPFGQVNSAVVMKDPNSATNRGFGFV 298
Query: 255 NFENADDAAKAVEALNGKKFD-----DREWYVGKAQKKSEREQELKGQFEQAMKETVDKF 309
N+E+AD A AVE L+GK F D E YVGKAQK++ERE+EL+ +F+Q E ++K+
Sbjct: 299 NYEDADGAHAAVEGLSGKTFKGVNGVDLELYVGKAQKRTERERELRQKFDQLKLERINKY 358
Query: 310 QGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRAL 369
QG+NLY+KNL D + DE+L+E F+ +GTITS +VMRD +G S+G GFV FSTPEEA+ A+
Sbjct: 359 QGVNLYVKNLDDLLQDEELREAFTNYGTITSARVMRDSTGNSRGFGFVCFSTPEEAATAV 418
Query: 370 AEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQ 429
AEMNGK+I KP+YVA AQRKE RRA+L+AQ +Q A G V MPM GQ
Sbjct: 419 AEMNGKLITGKPVYVAFAQRKEVRRAQLEAQHAQR---ATGVLVNRGMPM--------GQ 467
Query: 430 QFLYGQAPPAIIPPQMPPRG-HAYRYP---LGRNMQ-DFPFDMG--------------AG 470
+YG P QMP +G AY YP L R + PF G AG
Sbjct: 468 PPMYGAPMFYAQPNQMPMQGRQAYMYPQQMLPRGVHPRVPFGFGGRMPGAPGPAGFSMAG 527
Query: 471 SMLP------------VPVDMGA--GIPRR-------------------DASVGQPMPIT 497
+P VP GA G+P R + G MP
Sbjct: 528 YGMPMQQQRQPRRGRQVPGPAGAPNGMPNRRNFKYTTGARNHPSREGLGNNMSGGVMP-Q 586
Query: 498 ALSTALANASPEQ--------------QRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQ 543
ST + A + Q+ ++GE LYPL+ + + + A K+TGMLLEMD
Sbjct: 587 GSSTPMGGAPALEPLTSAALAAASPEAQKNMIGERLYPLIHRQQNELAGKITGMLLEMDN 646
Query: 544 TEVLHLLESPEALKAKVAEAMEVLRS 569
+E+LHLLESP+AL +K+ EA++VL +
Sbjct: 647 SELLHLLESPDALDSKIQEAIQVLEA 672
>gi|52346030|ref|NP_001005062.1| embryonic polyadenylate-binding protein [Xenopus (Silurana)
tropicalis]
gi|82235830|sp|Q6DEY7.1|EPAB_XENTR RecName: Full=Embryonic polyadenylate-binding protein;
Short=Embryonic poly(A)-binding protein; Short=ePABP
gi|49899948|gb|AAH76956.1| MGC89376 protein [Xenopus (Silurana) tropicalis]
Length = 629
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 281/634 (44%), Positives = 395/634 (62%), Gaps = 76/634 (11%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+G + SLYVGDL +VT++ LY+ FS G ++S+RVCRD++TRRSLGY Y+N+ P
Sbjct: 3 ATGAGYPLASLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + + IRIM+S RDP +RKSG GN+FIKNLD+SID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFEVIKGRPIRIMWSQRDPGLRKSGVGNVFIKNLDESIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D G S+G+GFV FE +E+A AI +NGML+ND++VFVGHF ++ERE
Sbjct: 123 GNILSCKVVCDEHG-SRGYGFVHFETQEAANRAIQTMNGMLLNDRKVFVGHFKSRREREL 181
Query: 202 V--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
A +F NV++KN E D+ L++IF +G S VM D G+S+ FGFVN+ N
Sbjct: 182 EYGAKVMEFTNVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDDTGRSRGFGFVNYGNH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
++A KAV +NGK+ + R YVG+AQK+ ER+ ELK +FEQ +E ++++QG+NLY+KNL
Sbjct: 242 EEAQKAVSEMNGKEVNGRMIYVGRAQKRIERQGELKRKFEQIKQERINRYQGVNLYVKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D IDD++L++ FS +GTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +
Sbjct: 302 DDGIDDDRLRKEFSPYGTITSAKVMTE-GGHSKGFGFVCFSSPEEATKAVTEMNGRIVST 360
Query: 380 KPLYVAVAQRKEERRARLQAQFSQ----MRPVAMGPSV----------------PPRMPM 419
KPLYVA+AQRKEER+A L Q+ Q MR + GP + PP
Sbjct: 361 KPLYVALAQRKEERKAILTNQYMQRLATMRAMP-GPLLGSFQQPANYFLPAMPQPPNRTF 419
Query: 420 YPPGPSG---LGQQFLYGQA-PPAIIPP-----QMPPRG--------------------H 450
Y P P Q+ Q+ PP PP +PPR H
Sbjct: 420 YSPNPVAPVRQAPQWTSHQSRPPQYQPPAPLMRAVPPRRMSSNISTMKQASTQVPRVAPH 479
Query: 451 AYRYP----------------LGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPM 494
+ R + R M + + ++ P+ + A + Q
Sbjct: 480 SQRVANIGTQTAGARAQVNPSIMRTMPHYKYSCAVRNVQPIGTNTHLQQVMEPAVLMQGQ 539
Query: 495 -PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESP 553
P+TA ++LA+A P++Q+ +LGE LYPL+ ++ A K+TGMLLE+D +E+LH+LESP
Sbjct: 540 EPLTA--SSLASAPPQEQKQMLGERLYPLIHEMHPTLAGKITGMLLEIDNSELLHMLESP 597
Query: 554 EALKAKVAEAMEVLRSVAQQQANNPADQLASLSL 587
E+L +KV EA+ VL++ QA + + A SL
Sbjct: 598 ESLHSKVEEAVAVLQA---HQAKENSQKSAQQSL 628
>gi|395829049|ref|XP_003787673.1| PREDICTED: polyadenylate-binding protein 1-like [Otolemur
garnettii]
Length = 611
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 279/600 (46%), Positives = 384/600 (64%), Gaps = 57/600 (9%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
AS + + SLYVGDL +VT++ LY+ FS VG +LS+RVCRD++TRRSLGY Y+N+ P
Sbjct: 3 ASSSGYPLASLYVGDLHADVTEALLYEKFSPVGPILSIRVCRDVATRRSLGYAYINFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + + IRIM+S RDP +RKSG GNIFIKNL+ SID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFEMIKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEASIDNKALYDTFSTF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+A D G S+GFGFV FE E+AQ+AI+ +NGML+ND +VFVGHF ++ERE
Sbjct: 123 GNILSCKVACDEHG-SRGFGFVHFETHEAAQHAINTMNGMLLNDHKVFVGHFKSRREREV 181
Query: 202 V--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
A +F N++VKNL ++ L+++F ++G + S VMRD G S+ FGFVNFE
Sbjct: 182 ELGARAMEFTNIYVKNLQADVDEQGLQELFSQFGKMLSVKVMRDSSGHSRGFGFVNFETH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
++A KAV +NGK+ R YVG+AQK+ ER+ ELK +FEQ ++ ++++QG+NLY+KNL
Sbjct: 242 EEAQKAVVHMNGKEVSGRLLYVGRAQKRVERQNELKRRFEQMKQDRMNRYQGVNLYVKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
DSIDDEKL++ FS +G ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +
Sbjct: 302 DDSIDDEKLRKEFSPYGMITSAKVMTE-GGHSKGFGFVCFSSPEEATKAVTEMNGRIVGT 360
Query: 380 KPLYVAVAQRKEERRARLQAQFSQ----MRPVA---MGPSVPPRMPMYPPGPSGLGQQFL 432
KPLYVA+AQRKEER+A L Q+ Q MR + +G P P P GQ
Sbjct: 361 KPLYVALAQRKEERKAILTNQYMQRLSTMRALGSPFLGSFQQPTSYFLPAVPQPPGQAAY 420
Query: 433 YGQA--PP------------------AIIPPQMPPRGHAYRYPLGRNMQDFPFDM----- 467
YG + PP + PP M R A+ + + P +
Sbjct: 421 YGSSSMPPPQPAPRWTSQPPRSSSASMVRPPGMSRRPSAHISSMRQASTQVPRPLPHTQR 480
Query: 468 ------------GAGSMLP----VPVDMGAGIPR-RDASVGQP--MPITALSTALANASP 508
G G +P +P R ++ +V P P+T + LA A
Sbjct: 481 VANIGTQTTGSSGTGCCMPGRPLLPYKSTHNTHRVQEPAVHVPGQEPLTV--SMLAAAPL 538
Query: 509 EQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLR 568
+Q+ ++GE LYPL+ +++ A K+TGMLLE+D +E+L +LESPE+L AKV EA+ VL+
Sbjct: 539 HEQKQMIGERLYPLIREVQSQLAGKITGMLLEIDNSELLLMLESPESLHAKVEEAVAVLQ 598
>gi|221121498|ref|XP_002156904.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1 [Hydra
magnipapillata]
Length = 635
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 284/606 (46%), Positives = 387/606 (63%), Gaps = 69/606 (11%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL+ +VT++ L++ FSQ G VLS+RVCRDL TRRSLGY YVN+ PADA RA+D
Sbjct: 12 SLYVGDLNPDVTEAMLFEKFSQTGPVLSIRVCRDLVTRRSLGYAYVNFQQPADAERAIDT 71
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+N+ P+ + RIM+S RDP++R+SG GNIFIKNLDK+ID+K L+D FS+FGNILSCKIA
Sbjct: 72 MNYDPIKGRPCRIMWSQRDPTLRRSGVGNIFIKNLDKNIDNKGLYDAFSAFGNILSCKIA 131
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER-ETVAIKT-KF 208
D S+G+GFV +E KE+A AI K+NGM++NDK+VFVG F+ K+ER E + + KF
Sbjct: 132 VDSKNVSRGYGFVHYETKEAAHEAIAKVNGMMLNDKKVFVGEFMSKRERLEKLGDQAKKF 191
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NVFVKN +S +E LK++FG++G ITS VVM + GKSK FGFV FE + A AV
Sbjct: 192 KNVFVKNFGDSLDEEKLKEMFGKHGEITSCVVMAE-SGKSKGFGFVAFEAPEAAEAAVNE 250
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
LNG + + R+ V +AQKK+ER ELK +FE E ++++QG+NLYIKNL D +DDE+L
Sbjct: 251 LNGLEIEGRKLVVCRAQKKAERTMELKSRFEAQKMERINRYQGVNLYIKNLEDGLDDERL 310
Query: 329 KELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
+ FS +GTITS KVM+D GISKG GFV FS+P+EA++A+ EMNG+++V+KPLYVA+AQ
Sbjct: 311 RSEFSTYGTITSAKVMKDEKGISKGFGFVCFSSPDEATKAVTEMNGRILVTKPLYVALAQ 370
Query: 389 RKEERRARLQAQFSQ----MRPVAMG------------------PSVPP-RMPMYPPGPS 425
RKEERRA+L QF Q +R A G P+VP + P +
Sbjct: 371 RKEERRAQLSTQFLQRVNPLRYNASGTMPQAGYSFQAGQPGFYIPTVPTNQRPFITQSVN 430
Query: 426 GLGQQFLYGQAPPAIIPPQM--------------PPRGHAYRYPLGRNMQDFPFDMGAGS 471
+ + QAP IP PPR P + P+ G G+
Sbjct: 431 QITRPRWQSQAPVQQIPANTQYASHVTQIRAGAAPPRPRHQGAPNVARREPAPYQPGMGT 490
Query: 472 ------MLPVPVDMGAGIPRRDAS---------------VGQPMPITAL--------STA 502
+P+ ++ A +R A +GQP A+ ST
Sbjct: 491 RTMPSQQVPIRPNVPAVAQQRTAYKYNPNTRNQYPAGQMIGQPDQAAAIIQGPDQLTSTI 550
Query: 503 LANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAE 562
LA A+P +Q+ ++GE L+PLV++ + A K+TGMLLE+D +E+LH+LES + L+AKV E
Sbjct: 551 LATATPTEQKQMIGERLFPLVQEFQPHLAGKITGMLLEIDNSELLHMLESRDLLRAKVEE 610
Query: 563 AMEVLR 568
A++VL+
Sbjct: 611 AVQVLQ 616
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Query: 302 MKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRD-PSGISKGSGFVAFS 360
M+ T + +LY+ +L + + L E FS+ G + S +V RD + S G +V F
Sbjct: 1 MQSTTQNYPIASLYVGDLNPDVTEAMLFEKFSQTGPVLSIRVCRDLVTRRSLGYAYVNFQ 60
Query: 361 TPEEASRALAEMNGKMIVSKPLYVAVAQR 389
P +A RA+ MN I +P + +QR
Sbjct: 61 QPADAERAIDTMNYDPIKGRPCRIMWSQR 89
>gi|328713207|ref|XP_001947071.2| PREDICTED: polyadenylate-binding protein 1-like [Acyrthosiphon
pisum]
Length = 630
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 288/630 (45%), Positives = 401/630 (63%), Gaps = 94/630 (14%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL +VT++ L++ FS VG VLS+RVCRD+ TRRSLGY YVN+ N ADA RALD
Sbjct: 3 SLYVGDLHSDVTEAMLFEKFSTVGAVLSIRVCRDMITRRSLGYAYVNFQNMADAERALDT 62
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF L + +RIM+S RDPS+RKSG GN+FIKNLD+SID+KA++DTFS+FGNILSCK+A
Sbjct: 63 MNFDILKGRPMRIMWSQRDPSLRKSGVGNVFIKNLDRSIDNKAMYDTFSAFGNILSCKVA 122
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET-VAIKTK-F 208
D +GQSKG+GFV FE ++SA +I+K+NGML+N K+VFVG F+ +++RE + K K +
Sbjct: 123 QDETGQSKGYGFVHFEMEQSATQSIEKVNGMLLNGKKVFVGRFVGRKDREKELGQKAKLY 182
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NV++KN+DE+ D++L ++F +YG+ITS VM DG S+ FGFV FE+ ++A KAV
Sbjct: 183 TNVYIKNIDENVNDKELFEMFEKYGSITSFKVMFRDDGSSRGFGFVAFEDPEEAEKAVTE 242
Query: 269 LNGKKF-DDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEK 327
L+GK+ + + +YVG+AQKK+ER+QELK +FEQ E ++++QG+NLY+KNL D+IDDE+
Sbjct: 243 LHGKESPEGKTYYVGRAQKKAERQQELKRKFEQYKIERMNRYQGVNLYVKNLDDTIDDER 302
Query: 328 LKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 387
L++ FS FGTITS KVM D G SKG GFV FS+PEEA++A+ +MNG+++ +KPLYVA+A
Sbjct: 303 LRKEFSVFGTITSAKVMMD-DGRSKGFGFVCFSSPEEATKAVTDMNGRIVGTKPLYVALA 361
Query: 388 QRKEERRARLQAQFSQ----MRPVAMGPSVPPRMPMYPPG-------PSGLGQQFLYGQA 436
QRKE+R+A L +Q+ Q MR ++G P+Y PG P+ Q YG
Sbjct: 362 QRKEDRKAHLDSQYLQRNTNMRMQSIG-------PIYQPGASSGYFVPTIPQPQRFYGPT 414
Query: 437 PPAIIPPQ-----------MPPRGHAYRYP----------------------LGRN---- 459
I PQ P+ A YP L RN
Sbjct: 415 QMTQIRPQPRWASQPQVRAGTPQAAAAGYPNMATQYRNIGARAPVPAGQQAALARNAMVD 474
Query: 460 ---------MQDFPFDMGAGSM-LPVPVDMGAGI---------PRRDASVGQ------PM 494
Q P + AG + +P G+G P + +GQ P
Sbjct: 475 RNARPISTAQQQMPGAVAAGGVRVPGARGTGSGYKYTANMRNPPGQAQGMGQAQPGQPPA 534
Query: 495 PITA----------LSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQT 544
P+ A +T LA A PE Q+ +LGE L+PL++++ + K+TGMLLE+D +
Sbjct: 535 PVQAAVHVHGQEPLTATMLATAKPEDQKQMLGERLFPLIQRMYPELTGKITGMLLEIDNS 594
Query: 545 EVLHLLESPEALKAKVAEAMEVLRSVAQQQ 574
++LH+LE E+LK KV E + VL++ QQ
Sbjct: 595 DLLHMLEHHESLKNKVEEVVAVLQAHQAQQ 624
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
N++ +LYV +LD + D +L FS G + S +V D RS G+G+V +++P +A
Sbjct: 282 NRYQGVNLYVKNLDDTIDDERLRKEFSVFGTITSAKVMMDDG--RSKGFGFVCFSSPEEA 339
Query: 85 ARALDVLNFTPLNNKSIRIMYSHR 108
+A+ +N + K + + + R
Sbjct: 340 TKAVTDMNGRIVGTKPLYVALAQR 363
>gi|164657987|ref|XP_001730119.1| hypothetical protein MGL_2501 [Malassezia globosa CBS 7966]
gi|159104014|gb|EDP42905.1| hypothetical protein MGL_2501 [Malassezia globosa CBS 7966]
Length = 664
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 274/587 (46%), Positives = 375/587 (63%), Gaps = 58/587 (9%)
Query: 28 LTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARA 87
+ TSLYVG+L+ NV ++ L+++F+ VG V S+RVCRD TRRSLGY YVN+ N D+ RA
Sbjct: 78 VNTSLYVGELEPNVNEAILFEIFNMVGAVSSIRVCRDTVTRRSLGYAYVNFLNAEDSERA 137
Query: 88 LDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSC 147
L+ LN+TP+ + RIM+S RDP R++G GNIFIKNLD++ID+KALHDTF++FG ILSC
Sbjct: 138 LEQLNYTPIRGRPCRIMWSQRDPGQRRAGQGNIFIKNLDEAIDNKALHDTFAAFGKILSC 197
Query: 148 KIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIK 205
K+A++ G S G+GFV +E+ ++A+ AI +NGML+NDK+V+VGH + K++R+ +
Sbjct: 198 KVASNEHG-SLGYGFVHYESNDAAEAAIKHVNGMLLNDKKVYVGHHISKKDRQAKIEEAR 256
Query: 206 TKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKA 265
+ NV+VKNLD + T E+ +K+F +YG ITSA + D +GKS+ FGFVNF + AAKA
Sbjct: 257 AHYTNVYVKNLDPAVTQEEFEKLFEKYGKITSAAIATDQEGKSRGFGFVNFSEHEQAAKA 316
Query: 266 VEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDD 325
VE LN +F ++ ++G+AQKKSERE+EL+ +E A E + K+QG+NLYIKNL + DD
Sbjct: 317 VEELNDTEFHGQKLFLGRAQKKSEREEELRRAYEAAKNEKLSKYQGVNLYIKNLPEDFDD 376
Query: 326 EKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVA 385
E+L+E F+ FGT TS KVMR P+G S+G GFV +S PEEA++A+AEMNGKMI ++PLYVA
Sbjct: 377 ERLQEEFAPFGTTTSAKVMRTPTGASRGFGFVCYSAPEEANKAVAEMNGKMIENRPLYVA 436
Query: 386 VAQRKEERRARLQAQFSQMRPV-------------AMGPSVPPRMPMYPPGPSGLGQQFL 432
+AQRK+ R +L AQ Q + M P P PP +G+GQ
Sbjct: 437 LAQRKDVRHQQLAAQMMQHNQLRLQQQQAAAAAAAQMYPGAPGMYYPQPPAAAGMGQ--F 494
Query: 433 YGQAPPAIIP---PQMPPRGH--AYRYPLGRNMQDFPFDMGAGSMLP------------- 474
GQ P P MPP A YP G+ FP AG M P
Sbjct: 495 PGQVRPQYAPGIMQGMPPMAGQPAGPYPPGQ----FP---PAGGMFPQGYRPPRPPRGAA 547
Query: 475 -------------VPVDMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYP 521
A +P + QP +TA ALANASPE+Q+ +LGE++YP
Sbjct: 548 APPAGAPAGVPAGAGAPRTAAVPAQPVQPAQPEVLTA--AALANASPEEQKQMLGEAIYP 605
Query: 522 LVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLR 568
+ + A K+TGM+LE+ E+LHL+E EAL +KV EA+ VLR
Sbjct: 606 KIASTQPQLAGKLTGMILELPVGELLHLVEDDEALASKVDEALTVLR 652
>gi|383862669|ref|XP_003706806.1| PREDICTED: polyadenylate-binding protein 1-like isoform 2
[Megachile rotundata]
Length = 612
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 290/608 (47%), Positives = 385/608 (63%), Gaps = 76/608 (12%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL ++T++ L++ FS G VLS+RVCRD+ TRRSLGY YVN+ PADA RALD
Sbjct: 12 SLYVGDLHADITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF + + IRIM+S RDPS+RKSG GN+FIKNLDK+ID+KA++DTFS+FGNILSCK+A
Sbjct: 72 MNFDMIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVA 131
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET-VAIKTK-F 208
D SG SKG+GFV FE +E+A +IDK+NGML+N K+V+VG F+ ++ERE + K K F
Sbjct: 132 QDESGVSKGYGFVHFETEEAANKSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLF 191
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NV+VKN E TD+ LK++F +YGTITS VM DGKS+ FGFV FE+ D A +AV
Sbjct: 192 TNVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGKSRGFGFVAFEDPDAAEQAVLE 251
Query: 269 LNGKKF-DDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEK 327
LNGK+ + + YVG+AQKK+ER+QELK +FEQ E + ++QG+NLY+KNL DSI+DE+
Sbjct: 252 LNGKEVAEGKCMYVGRAQKKAERQQELKRKFEQLKLERLSRYQGVNLYVKNLDDSINDER 311
Query: 328 LKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 387
L+ F+ FGTITS KVM + G SKG GFV FS PEEA++A+ EMNG++IV+KPLYVA+A
Sbjct: 312 LRREFAPFGTITSAKVMME-DGRSKGFGFVCFSAPEEATKAVTEMNGRIIVTKPLYVALA 370
Query: 388 QRKEERRARLQAQFSQ----MRPVAMGPSVPPRMPMYPPGPSGLGQQFL---------YG 434
QRKE+R+A L +Q+ Q MR MG M+PPG G G F+ YG
Sbjct: 371 QRKEDRKAHLASQYMQRLANMRMQQMG-------QMFPPG--GAGNYFVPTIPQPQRFYG 421
Query: 435 QAPPAII--PPQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQ 492
A A I P+ P + + R F G P AG R S
Sbjct: 422 PAQMAQIRATPRWPAQPNQVRPNAQTGNSGFATMQGPFRTTPRAPTAQAGTMRSTLSA-- 479
Query: 493 PMPITALST--------------------ALANASP------------------------ 508
PITA+ A+A +P
Sbjct: 480 -RPITAVGVSAQSRPSNYKYTSNMRNPPQAMAIPAPTPVQQAVHIQGQEPLTASMLAAAP 538
Query: 509 -EQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVL 567
++Q+ +LGE L+PL++ + K+TGMLLE+D +E+LH+LE E+LKAKV EA+ VL
Sbjct: 539 PQEQKQMLGERLFPLIQCMYPQLTGKITGMLLEIDNSELLHMLEHNESLKAKVEEAVAVL 598
Query: 568 RSVAQQQA 575
++ +QA
Sbjct: 599 QAHQAKQA 606
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
+++ +LYV +LD ++ D +L F+ G + S +V + RS G+G+V ++ P +A
Sbjct: 291 SRYQGVNLYVKNLDDSINDERLRREFAPFGTITSAKVM--MEDGRSKGFGFVCFSAPEEA 348
Query: 85 ARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNL 125
+A+ +N + K + + + R RK+ + +++ L
Sbjct: 349 TKAVTEMNGRIIVTKPLYVALAQRKED-RKAHLASQYMQRL 388
>gi|148298695|ref|NP_001091823.1| poly A binding protein [Bombyx mori]
gi|111608107|gb|ABH10797.1| poly A binding protein [Bombyx mori]
Length = 603
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 286/603 (47%), Positives = 386/603 (64%), Gaps = 62/603 (10%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL ++T++ L++ FS G VLS+RVCRD+ TRRSLGY YVN+ P DA RALD
Sbjct: 3 SLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAERALDT 62
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF + + IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL DTFS+FGNILSCK+A
Sbjct: 63 MNFDIIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALFDTFSAFGNILSCKVA 122
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET-VAIKTK-F 208
D +G SKG+GFV FE +E+A +I+K+NGML+N K V+VG F+ ++ERE + K K F
Sbjct: 123 QDETGASKGYGFVHFETEEAANKSIEKVNGMLLNGKMVYVGRFIPRKEREKELGEKAKLF 182
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NV+VKN E +DE LK +F +YG ITS VM DG S+ FGFV FE+ D A +A
Sbjct: 183 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIE 242
Query: 269 LNGKKF-DDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEK 327
LNGK+ + + YVG+AQKK+ER++ELK +FEQ E + ++QG+NLY+KNL D+IDDE+
Sbjct: 243 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 302
Query: 328 LKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 387
L++ F+ FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +KPLYVA+A
Sbjct: 303 LRKEFAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALA 361
Query: 388 QRKEERRARLQAQFSQ----MRPVAMG-------------PSVPPRMPMYPPGPSGLGQ- 429
QRKE+R+A L +Q+ Q MR MG PS+PP Y GP+ + Q
Sbjct: 362 QRKEDRKAHLTSQYMQRMASMRMQQMGQIFQPSGASGFFVPSLPPAPRYY--GPAQMTQI 419
Query: 430 --QFLYGQAPPAIIPPQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPV-PVDMGAGIPRR 486
A P + P +A P R P + L P+ G+
Sbjct: 420 RPTTPRWNAQPPVRPSTQAASAYANMQPTYRPAPRAPAQSTIRTSLGARPITGQQGVAAA 479
Query: 487 DASVGQPM--------------------------------PITALSTALANASPEQQRTL 514
AS+ P+ P+T ST LA A ++Q+ +
Sbjct: 480 AASIRPPLVSQSSRPANYKYTPNMRNPPAPQPAVHIQGQEPLT--STMLAAAPLQEQKQM 537
Query: 515 LGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRS-VAQQ 573
LGE L+PL++++ D A K+TGMLLE+D +E+LH+LE E+LKAKV EA+ VL++ A+Q
Sbjct: 538 LGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVLQAHQAKQ 597
Query: 574 QAN 576
QA
Sbjct: 598 QAT 600
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 98/191 (51%), Gaps = 21/191 (10%)
Query: 28 LTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVC-RDLSTRRSLGYGYVNYANPADAAR 86
L T++YV + + +D L D+F + G++ S +V +D R G+G+V + +P A R
Sbjct: 181 LFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSR--GFGFVAFEDPDAAER 238
Query: 87 ALDVLNFTPL----------------NNKSIRIMYSH-RDPSIRKSGTGNIFIKNLDKSI 129
A LN L K ++ + + + + N+++KNLD +I
Sbjct: 239 ACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTI 298
Query: 130 DHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVF 189
D + L F+ FG I S K+ + G+SKGFGFV F + E A A+ ++NG ++ K ++
Sbjct: 299 DDERLRKEFAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLY 357
Query: 190 VGHFLRKQERE 200
V RK++R+
Sbjct: 358 VALAQRKEDRK 368
>gi|344279674|ref|XP_003411612.1| PREDICTED: polyadenylate-binding protein 1 [Loxodonta africana]
Length = 612
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 288/616 (46%), Positives = 387/616 (62%), Gaps = 61/616 (9%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
ASG + SLYVGDL +VT++ LY+ F G +LS+RVCRD++TRRSL Y Y+N+ P
Sbjct: 3 ASGPGYPLASLYVGDLHADVTEAMLYEKFLPAGPILSIRVCRDVATRRSLRYAYINFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + + IRIM+S RDP +RKSG GNIFIKNL+ SID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFEVIKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D G S+GFGFV FE E+AQ AI +NGML+ND++VFVGHF ++ERE
Sbjct: 123 GNILSCKVVCDEHG-SRGFGFVHFETHEAAQQAISTMNGMLLNDRKVFVGHFKSRREREA 181
Query: 202 --VAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
A +F N++VKNL ++ L+ +F ++G + S VM+D +G S+ FGFVNFE
Sbjct: 182 ELRARAMEFTNIYVKNLQVDMDEQGLQDLFSQFGKLLSVKVMKDNNGHSRGFGFVNFEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
++A KAV +NGK+ R+ YVG+AQK+ ER+ ELK +FEQ ++ ++++QG+NLY+KNL
Sbjct: 242 EEAQKAVMDMNGKEVSGRQLYVGRAQKRVERQNELKRKFEQMKQDRLNRYQGVNLYVKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
DSIDDEKL++ FS +G ITS KVM + G SKG GFV FS+PEEA++A+ EMNG++I +
Sbjct: 302 DDSIDDEKLRKEFSPYGVITSAKVMTE-GGHSKGFGFVCFSSPEEATKAVTEMNGRIIGT 360
Query: 380 KPLYVAVAQRKEERRARLQAQFSQ----MRPVA---MGPSVPPRMPMYPPGPSGLGQQFL 432
KPLYVA+AQRKEERRA L Q+ Q MR + +G S P P P +
Sbjct: 361 KPLYVALAQRKEERRAILSNQYMQRLSTMRALGVPLLGSSQQPTSYFLPAMPQPPARAAY 420
Query: 433 YGQAPPAIIPP-----QMPPR---GHAYRYPLG--RNMQDFPFDMGAGSMLPVPV----- 477
YG A I P PPR R P R + A + +P PV
Sbjct: 421 YGSGSVATIQPAPRWAAQPPRPSCASMVRPPATPRRPLAQLSTVRQASTQVPHPVPHTQR 480
Query: 478 -------DMGAG-----------IPRRDASVGQ--------PM----PITALSTALANAS 507
G G +P R +S PM P+TA + LA A
Sbjct: 481 VANIGTQTTGPGGAEGCTSGQLLLPYRHSSAAHNVHRVLESPMHRQEPLTA--SMLAAAL 538
Query: 508 PEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVL 567
P +Q+ ++GE LYPL+ + A K+TGMLLE+D +E+L +LESPE+L+AK+ EA+ VL
Sbjct: 539 PHEQKQMIGERLYPLIYGVYPHLAGKITGMLLEIDNSELLLMLESPESLQAKIEEAVAVL 598
Query: 568 RSVAQQQANNP-ADQL 582
+ A Q +P AD L
Sbjct: 599 Q--AHQAMEHPRADLL 612
>gi|327271804|ref|XP_003220677.1| PREDICTED: embryonic polyadenylate-binding protein-like [Anolis
carolinensis]
Length = 635
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 284/620 (45%), Positives = 384/620 (61%), Gaps = 78/620 (12%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
ASG + SLYVGDL +VT++ LY+ FS G ++S+RVCRD++TRRSLGY Y+N+ P
Sbjct: 3 ASGPGYPLASLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDVATRRSLGYAYINFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + + IRIM+S RDP +RKSG GNIFIKNLD SID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFEVIKGRPIRIMWSQRDPGLRKSGVGNIFIKNLDDSIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G S+G+GFV FE E+A AI +NGML+ND++VFVG+F ++ERE
Sbjct: 123 GNILSCKVVCDENG-SRGYGFVHFETHEAANRAIATMNGMLLNDRKVFVGNFKSRREREA 181
Query: 202 V--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
A +F NV++KN E ++E L++ F +G S VM D G+SK FGFVNFE
Sbjct: 182 EYGAKAMEFTNVYIKNFGEEMSNERLQETFSIFGKTLSVKVMTDNIGRSKGFGFVNFEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
DA KAVE +NGK+ + R YVG+AQK+ ER+ ELK +FEQ +E V ++QG+NLY+KNL
Sbjct: 242 QDAQKAVEDMNGKEINGRMLYVGRAQKRMERQSELKRKFEQIKQERVSRYQGVNLYVKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D IDDE+L++ FS +GTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +
Sbjct: 302 DDGIDDERLRKEFSPYGTITSAKVMTE-GGHSKGFGFVCFSSPEEATKAVTEMNGRIVST 360
Query: 380 KPLYVAVAQRKEERRARLQAQFSQ----MR-------------PVAMGPSVP---PRMPM 419
KPLYVA+AQRKEER+A L Q+ Q +R P PS+P PR P
Sbjct: 361 KPLYVALAQRKEERKAILTNQYMQRLATLRTLPGPLFCSFQPPPGYFVPSIPQPQPRTPY 420
Query: 420 Y--------PPGPSGLGQQ------------FLYGQAPPAII-------------PPQMP 446
Y P P GQ L APP I P++P
Sbjct: 421 YNASPVAPVRPAPRWNGQHSRPPSSYHTATPVLRTNAPPRRILNNISTMRQASTQVPRVP 480
Query: 447 PRGH----------AYRYP----LGRNMQDFPFDMGAGSMLPV----PVDMGAGIPRRDA 488
P + R P R + + + ++ P+ P+ M +
Sbjct: 481 PNAQRMANIGTQTVSVRAPSPPTFSRGISQYKYSSAVRNIQPLNAMPPIPMQQVVEPAVH 540
Query: 489 SVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLH 548
GQ P+TA + LA A P++Q+ +LGE LYPL+ + A K+TGMLLE+D +E+L
Sbjct: 541 IHGQ-EPLTA--SMLAAAPPQEQKQILGERLYPLIHAMHPFLAGKITGMLLEIDNSELLL 597
Query: 549 LLESPEALKAKVAEAMEVLR 568
+LESPE+L +K+ EA+ VL+
Sbjct: 598 MLESPESLHSKIEEAVAVLQ 617
>gi|194044632|ref|XP_001927442.1| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Sus scrofa]
Length = 610
Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust.
Identities = 281/602 (46%), Positives = 374/602 (62%), Gaps = 58/602 (9%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
ASG + SLYVGDL +VT++ LY+ FS G +LS+RVCRD++TRRSLGY Y+N+ P
Sbjct: 3 ASGPGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + + IRIM+S RDP +RKSG GN+FIKNL+ SID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFEVIKGQPIRIMWSQRDPGLRKSGVGNVFIKNLEDSIDNKALYDTFSTF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D G S+GFGFV FE E+AQNAI +NGML+ND++VFVGHF ++ERE
Sbjct: 123 GNILSCKVVCDDHG-SRGFGFVHFETHEAAQNAIRTMNGMLLNDRKVFVGHFKSRREREA 181
Query: 202 V--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
A +F N++VKNL + L+ +F ++G I S VMRD G S+ FGFVNFE
Sbjct: 182 ELGARALEFTNIYVKNLHVDVDERCLQDLFSQFGKILSVKVMRDDSGHSRGFGFVNFEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAV +NGK+ R YVG+AQK+ ER+ ELK +FEQ ++ + ++QG+NLY+KNL
Sbjct: 242 EDAQKAVTDMNGKEVSGRLLYVGRAQKRVERQNELKRRFEQMKQDRLTRYQGVNLYVKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
DSIDDEKL++ F+ +G ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +
Sbjct: 302 DDSIDDEKLRKEFAPYGMITSAKVMTE-GGHSKGFGFVCFSSPEEATKAVTEMNGRIVGT 360
Query: 380 KPLYVAVAQRKEERRARLQAQF----SQMRPVA---MGPSVPPRMPMYPPGPSGLGQQFL 432
KPLYVA+AQRKEER+A L Q+ S MR + +G P P P Q
Sbjct: 361 KPLYVALAQRKEERKAILTNQYIQRLSTMRALGSPLLGSLQQPTSYFLPAVPQPPAQSPY 420
Query: 433 YGQAPPAIIPPQM---PPRGHAY------------RYPLGRNMQ-------DFPFDMGA- 469
Y PP PP+ PPR P+ + Q P G
Sbjct: 421 YASGPPVQPPPRWTAQPPRPSCASVVRPAAVSRRPSVPISSSRQVSIHVPRPVPQTQGVA 480
Query: 470 --GSMLPVPVDMGAGIP-------------RRDASVGQP-------MPITALSTALANAS 507
G+ P MG P V +P P+TA + LA A
Sbjct: 481 NIGTQTTGPGVMGCATPSGPLLTHKCCSATHNSPRVQEPGVRVPRQEPLTA--SVLAAAP 538
Query: 508 PEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVL 567
+Q+ ++GE LYPL+ + A K+TGMLLE+D +E+L +LESPE+L AKV EA+ VL
Sbjct: 539 LHEQKQMIGERLYPLIYNMHTQLAGKITGMLLEIDNSELLLMLESPESLSAKVEEALAVL 598
Query: 568 RS 569
++
Sbjct: 599 QA 600
>gi|158563873|sp|Q5B630.2|PABP_EMENI RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|259481418|tpe|CBF74916.1| TPA: Polyadenylate-binding protein, cytoplasmic and nuclear
(Poly(A)-binding protein)(PABP)(Polyadenylate
tail-binding protein)
[Source:UniProtKB/Swiss-Prot;Acc:Q5B630] [Aspergillus
nidulans FGSC A4]
Length = 732
Score = 506 bits (1304), Expect = e-140, Method: Compositional matrix adjust.
Identities = 293/698 (41%), Positives = 393/698 (56%), Gaps = 149/698 (21%)
Query: 18 VAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVN 77
V A A+ +Q + SLYVG+LD +VT++ LY+LFS +GQV S+RVCRD TRRSLGY YVN
Sbjct: 30 VEAPATTSQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVN 89
Query: 78 YANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDT 137
Y + A RALD LN+T + K RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDT
Sbjct: 90 YNDTAHGERALDELNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDT 149
Query: 138 FSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQ 197
F++FGNILSCK+A D G SKG+GFV +E E+A NAI +NGML+NDK+VFVGH + K+
Sbjct: 150 FAAFGNILSCKVAQDEFGVSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKK 209
Query: 198 ERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVN 255
+R++ +K F N+++KN+D DE+ +K+F ++G ITSA + RD +GKS+ FGFVN
Sbjct: 210 DRQSKFEEMKANFTNIYIKNIDPEVEDEEFRKLFEKFGEITSATLSRDSEGKSRGFGFVN 269
Query: 256 FENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLY 315
F + A AVE +N K+ ++ YVG+AQKK ERE+EL+ Q+E A E K+QG+NLY
Sbjct: 270 FSTHESAQAAVEEMNDKEVRSQKLYVGRAQKKHEREEELRKQYEAARMEKASKYQGVNLY 329
Query: 316 IKNLGDSIDDEKLKELFSEFGTITSCKVMRD----------------------------- 346
+KNL D +DD+KL+ELF +GTITS KVMRD
Sbjct: 330 VKNLTDDVDDDKLRELFGPYGTITSAKVMRDTAPVETATPESETKESANKENEKAAEGEK 389
Query: 347 ----------------------PSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYV 384
P G SKG GFV FS+P+EAS+A+ EMN +M+ KPLYV
Sbjct: 390 EPAAEEKEKEEKKEAEQKPEKKPLGKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKPLYV 449
Query: 385 AVAQRKEERRARLQAQFSQMRPVA--------------MGPSVPPRMPMYPPGPSGLGQQ 430
A+AQRK+ RR++L+A + M P+V Y PG G
Sbjct: 450 ALAQRKDVRRSQLEASIQARNNIRQQQAAAAAGMGQAYMAPAV-----FYGPGQQG---- 500
Query: 431 FLYGQAPPAIIPPQ------MPPRGHAYRYP---------LGRNMQDFPFDMGAGSMLPV 475
F+ G + PPQ MP R Y P +G N Q P G LP+
Sbjct: 501 FIPGAQRGGMFPPQPGMMMGMPGRPGQYPGPFPGQQGGRGVGPNQQIPPNFQG----LPM 556
Query: 476 PVDMGAGIPR-------------------------------------------------- 485
G GIP
Sbjct: 557 GAMQGPGIPNGMGYPMVQGQFGGGRGRGQVPGMGGPMRGGYGGGRGGVPLGGQMRPGQGG 616
Query: 486 RDASVGQPMPITAL----STALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEM 541
R +VGQP P T + + AL+ A P+QQ+ +LGE+LYP ++ + + A K+TGMLLEM
Sbjct: 617 RGQAVGQPGPETPVGVLTAQALSAAPPQQQKQMLGEALYPKIQATQPELAGKITGMLLEM 676
Query: 542 DQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNPA 579
D TE+L LLE EAL+AKV EA+ V + +++ PA
Sbjct: 677 DNTELLGLLEDDEALRAKVDEALSVYDEYMKNKSDEPA 714
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 105/318 (33%), Positives = 169/318 (53%), Gaps = 21/318 (6%)
Query: 92 NFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIAT 151
N TP N + + + + + ++++ LD S+ L++ FSS G + S ++
Sbjct: 16 NGTPDNAPAPEVTAVEAPATTSQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCR 75
Query: 152 DG-SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNN 210
D + +S G+ +V + + + A+D+LN LI K + +R+ KT N
Sbjct: 76 DAVTRRSLGYAYVNYNDTAHGERALDELNYTLIKGKPCRI----MWSQRDPALRKTGQGN 131
Query: 211 VFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALN 270
VF+KNLD + ++ L F +G I S V +D G SK +GFV++E A+ A A++ +N
Sbjct: 132 VFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGVSKGYGFVHYETAEAANNAIKHVN 191
Query: 271 GKKFDDREWYVGKAQKKSERE---QELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEK 327
G +D++ +VG K +R+ +E+K F N+YIKN+ ++DE+
Sbjct: 192 GMLLNDKKVFVGHHISKKDRQSKFEEMKANF-------------TNIYIKNIDPEVEDEE 238
Query: 328 LKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 387
++LF +FG ITS + RD G S+G GFV FST E A A+ EMN K + S+ LYV A
Sbjct: 239 FRKLFEKFGEITSATLSRDSEGKSRGFGFVNFSTHESAQAAVEEMNDKEVRSQKLYVGRA 298
Query: 388 QRKEERRARLQAQFSQMR 405
Q+K ER L+ Q+ R
Sbjct: 299 QKKHEREEELRKQYEAAR 316
>gi|357628251|gb|EHJ77641.1| poly A binding protein [Danaus plexippus]
Length = 601
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 284/600 (47%), Positives = 389/600 (64%), Gaps = 56/600 (9%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL ++T++ L++ FS G VLS+RVCRD+ TRRSLGY YVN+ P+DA RALD
Sbjct: 3 SLYVGDLHSDITEAMLFEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPSDAERALDT 62
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF + + IRIM+S RDPS+RKSG GN+FIKNLDK+ID+KA++DTFS+FGNILSCK+A
Sbjct: 63 MNFDMIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKAIDNKAMYDTFSAFGNILSCKVA 122
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET-VAIKTK-F 208
D +G SKG+GFV FE +E+A +I+K+NGML+N K+V+VG F+ ++ERE + K K F
Sbjct: 123 QDENGASKGYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREKELGEKAKLF 182
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NV+VKN E +DE L+ +F +YG ITS VM DG S+ FGFV FE+ D A +A
Sbjct: 183 TNVYVKNFGEDFSDEMLRDMFEKYGRITSHKVMYKEDGSSRGFGFVAFEDPDAAERACLE 242
Query: 269 LNGKKF-DDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEK 327
LNGK+ + + YVG+AQKK+ER++ELK +FEQ E + ++QG+NLY+KNL D+IDDE+
Sbjct: 243 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 302
Query: 328 LKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 387
L++ F+ FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +KPLYVA+A
Sbjct: 303 LRKEFAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALA 361
Query: 388 QRKEERRARLQAQFSQ----MRPVAMG-------------PSVPPRMPMYPPGPSGLGQ- 429
QRKE+R+A L +Q+ Q MR MG P++PP Y GP+ + Q
Sbjct: 362 QRKEDRKAHLTSQYMQRMASMRMQQMGQIFQPGSAGGYFVPTIPPAQRFY--GPAQITQM 419
Query: 430 ---QFLYGQAP------------PAIIPPQMP----PRGHAYRYPLGRNMQDFPFDMGAG 470
Q Q P P + P P P A R LG + A
Sbjct: 420 RPSQRWTAQPPVRPSTQTAASAYPNMQAPFRPTTRGPTQTALRTSLGARPITGQQGVAAA 479
Query: 471 SMLP---VPVDMGAGIPRRDASVGQPMPITAL---------STALANASPEQQRTLLGES 518
+ VP AG P P A+ ++ LA A ++Q+ +LGE
Sbjct: 480 PSIRAPLVPSGRTAGYKYTSTVRNPPAPQPAVHIQGQEPLTASMLAAAPLQEQKQMLGER 539
Query: 519 LYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRS-VAQQQANN 577
L+PL++++ D A K+TGMLLE+D +E+LH+LE E+LKAKV EA+ VL++ A+QQA
Sbjct: 540 LFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHGESLKAKVDEAVAVLQAHQAKQQATK 599
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 99/192 (51%), Gaps = 23/192 (11%)
Query: 28 LTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVC--RDLSTRRSLGYGYVNYANPADAA 85
L T++YV + + +D L D+F + G++ S +V D S+R G+G+V + +P A
Sbjct: 181 LFTNVYVKNFGEDFSDEMLRDMFEKYGRITSHKVMYKEDGSSR---GFGFVAFEDPDAAE 237
Query: 86 RALDVLNFTPL----------------NNKSIRIMYSH-RDPSIRKSGTGNIFIKNLDKS 128
RA LN L K ++ + + + + N+++KNLD +
Sbjct: 238 RACLELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDT 297
Query: 129 IDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQV 188
ID + L F+ FG I S K+ + G+SKGFGFV F + E A A+ ++NG ++ K +
Sbjct: 298 IDDERLRKEFAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPL 356
Query: 189 FVGHFLRKQERE 200
+V RK++R+
Sbjct: 357 YVALAQRKEDRK 368
>gi|296200520|ref|XP_002747628.1| PREDICTED: polyadenylate-binding protein 1-like [Callithrix
jacchus]
Length = 614
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 283/613 (46%), Positives = 384/613 (62%), Gaps = 62/613 (10%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
ASG+ + SLYVGDL +VT++ LY+ FS G +LS+RVCRD++TRRSLGY Y+N+ P
Sbjct: 3 ASGSGYPLASLYVGDLHPDVTEAMLYEKFSPAGSILSIRVCRDVATRRSLGYAYINFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF L + IRIM+S RDP +RKSG GNIFIKNL+ SID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER-- 199
GNILSCK+A D G S+GFGFV FE E+AQ AI+ +NGML+ND++VFVGHF ++ER
Sbjct: 123 GNILSCKVACDKHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRRERAA 181
Query: 200 ETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
E A +F N++VKNL ++ L+ +F ++G + S VMRD G+S+CFGFVNFE
Sbjct: 182 ELGARALEFTNIYVKNLPADVDEQGLQDLFSQFGKMLSVKVMRDNSGRSRCFGFVNFEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
++A KAV +NGK+ R Y +AQK+ ER+ ELK +FEQ ++ + ++QG+NLY+KNL
Sbjct: 242 EEAQKAVVHMNGKEVSGRLLYASRAQKRVERQNELKRKFEQMKQDRLSRYQGVNLYVKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
DSIDD+KL++ FS +G ITS KVM + S SKG GFV FS+PEEA++A+ EMNG+++ +
Sbjct: 302 DDSIDDDKLRKEFSPYGVITSAKVMTEGSH-SKGFGFVCFSSPEEATKAVTEMNGRIVGT 360
Query: 380 KPLYVAVAQRKEERRARLQAQFSQ----MRPVA---MGPSVPPRMPMYPPGPSGLGQQFL 432
KPLYVA+AQRKEER+A L Q+ Q MR ++ +G P P P Q
Sbjct: 361 KPLYVALAQRKEERKAILTNQYMQRLSTMRTLSNPLLGSFQQPSSYFLPAVPQPPAQAAY 420
Query: 433 YGQAP-----PA---------------IIPPQMP--PRGH--AYRYPLGRNMQDFPFDM- 467
YG P PA + PP MP P H + R + + P
Sbjct: 421 YGCGPVTPTQPAPRWTSQPPRPSCASMVRPPVMPRCPPAHISSVRQASTQVPRTVPHTQR 480
Query: 468 --GAGSMLPVPVDMGAGIPRR------------------DASVGQP--MPITALSTALAN 505
G+ P +G P R + +V P P+TA + LA
Sbjct: 481 VANIGTQTTGPSGVGCCTPGRPLLPYKCSSAAHSTDQVQEPAVHIPGHEPLTA--SMLAA 538
Query: 506 ASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAME 565
A +Q+ ++GE LYPL+ + A K+TGMLLE+D +E+L +LESPE+L AK+ EA+
Sbjct: 539 APLHEQKQMIGERLYPLIHDVHTQLAGKITGMLLEIDNSELLLMLESPESLHAKIDEAVA 598
Query: 566 VLRSVAQQQANNP 578
VL+ A Q P
Sbjct: 599 VLQ--AHQAVEQP 609
>gi|401886540|gb|EJT50568.1| polyadenylate-binding protein [Trichosporon asahii var. asahii CBS
2479]
Length = 686
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 278/607 (45%), Positives = 375/607 (61%), Gaps = 64/607 (10%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVG+LD +VT++ L+++F+ VG V S+RVCRD TRRSLGY YVNY N AD RAL
Sbjct: 56 SASLYVGELDPSVTEAMLFEIFNMVGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERAL 115
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LN++ + N+ RIM+S RDP++RK+G GNIFIKNLD ID+KALHDTF++FGNILSCK
Sbjct: 116 EHLNYSLIKNRPCRIMWSQRDPALRKTGQGNIFIKNLDDKIDNKALHDTFAAFGNILSCK 175
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVA--IKT 206
+ATD +G S+GF FV +E E+A AI +NGML+NDK+V+VGH + K+ER++ +
Sbjct: 176 VATDENGNSRGFAFVHYETGEAADAAIKSVNGMLLNDKKVYVGHHISKKERQSKVEEQRA 235
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
KF N+F+KNL+ T +DL+ +F +G I SA + DG SK F FVN+ D A KAV
Sbjct: 236 KFTNIFIKNLEPEFTQKDLEDMFKPFGEIVSAALSVGEDGLSKGFAFVNYTTHDAAKKAV 295
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
+ LN K+ + ++ YVG+AQK++ER++EL+ E+ E K G+NLY+KN+ D DD+
Sbjct: 296 DELNDKEINGKKLYVGRAQKRAERDEELRRMHEERRLENESKTAGVNLYVKNIDDEWDDD 355
Query: 327 KLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 386
+L+ F GTITS KVMRD G S+G GFV FS P+EA+RA+ EMNGKMI +KPLYV++
Sbjct: 356 RLRSEFDFAGTITSAKVMRDDKGASRGFGFVCFSQPDEATRAVQEMNGKMIGTKPLYVSL 415
Query: 387 AQRKEERRARLQAQFSQ------------------------MRPVAMGPSVPPRMPM--- 419
AQ+KE RR L++Q Q M MGP P MP+
Sbjct: 416 AQKKEVRRQALESQMQQRNAQRLQYAAANGLGGPQGYMQAPMYYPPMGPYGGPMMPVRGG 475
Query: 420 ---YPPGPSGLGQQFLYGQAPPAIIPPQ------MPPRGHAYRYPLGRNMQDFPFDMGAG 470
YP P +G + G+ PP+ P MPP G YP M ++P
Sbjct: 476 VVGYPGAPPMMGAR--PGRYPPSGQPGAPVPMGYMPPGGAGGNYP---GMPNYPVRPAGN 530
Query: 471 SMLPV-------PVDMGAGIPR-----------RDASVGQPMPITALSTALANASPEQQR 512
+ P P G+PR A+ GQP +TA ALA ASP +QR
Sbjct: 531 ARPPTAARPNGSPSGAQQGLPRGQVPARPQGDGAQAAAGQPR-LTA--QALARASPGEQR 587
Query: 513 TLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQ 572
+LGE++YPL+ + + + A K+TGMLLEMD E+LHL+ESP AL KV EA+ VL +
Sbjct: 588 QMLGEAIYPLIHESQPELAGKITGMLLEMDNAELLHLVESPAALTEKVDEALRVLEDWGK 647
Query: 573 QQANNPA 579
PA
Sbjct: 648 NDEEKPA 654
>gi|19526272|gb|AAL89666.1|AF411956_7 polyA-binding protein [Takifugu rubripes]
Length = 623
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 290/630 (46%), Positives = 395/630 (62%), Gaps = 90/630 (14%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+GN + SLYVGDL ++T++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN++ P
Sbjct: 4 AAGN-YPMASLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFDVVKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G SKG+ FV FE +++A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 202 -VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ K K F NV++KN + DE LK++F +YG S VM D GKS+ FGFV++E
Sbjct: 182 ELGAKAKEFTNVYIKNFGDDMDDERLKELFDKYGKTLSVKVMMDPTGKSRGFGFVSYEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAVE +NG + + + +VG+AQKK+ER+ ELK +FE +E + ++QG+NLYIKNL
Sbjct: 242 EDANKAVEDMNGTELNGKTVFVGRAQKKNERQAELKRKFEMLKQERISRYQGVNLYIKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ S
Sbjct: 302 DDTIDDEKLRKEFSPFGSITSAKVMLE-EGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 380 KPLYVAVAQRKEERRARLQAQF----------------SQMRPVA--MGPSVP------- 414
KPLYVA+AQRKEER+A L Q+ +Q +P + P+VP
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQRIAGMRAMPANTIINQFQPTSGYFMPAVPQAQNRTT 420
Query: 415 -------------PR------------MP--MYPPGPSGLGQQFLYGQAPPAIIPPQMPP 447
PR MP + PGP G +Q + P
Sbjct: 421 YYAPNQLAQMRPNPRWQQQGGRGGFQGMPNTLRQPGPRGNMRQMTPNSSSQG-------P 473
Query: 448 RGHAYRYPLGRNMQDFPFDMGA-GSMLPVPVDMGAGIPRRDASVGQPM------------ 494
RG A + M P MG G P G+ + V QP+
Sbjct: 474 RGSA------QTMAPRP-SMGVPGPRNVTPYKYATGVRNPNPQVVQPIALQQPAVHVQGQ 526
Query: 495 -PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESP 553
P+T + LA A P++Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+LES
Sbjct: 527 EPLT--PSMLAAAPPQEQKQMLGERLFPLIQAMHANLAGKITGMLLEIDNSELLHMLESH 584
Query: 554 EALKAKVAEAMEVLRSVAQQQANNPADQLA 583
E+L++KV EA+ VL++ QA A Q A
Sbjct: 585 ESLRSKVEEAVAVLQA---HQAKKDATQKA 611
>gi|426242065|ref|XP_004014898.1| PREDICTED: polyadenylate-binding protein 1-like [Ovis aries]
Length = 611
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 281/600 (46%), Positives = 377/600 (62%), Gaps = 56/600 (9%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
ASG + SLYVGDL +VT++ LY+ FS G +LS+RVCRD++TRRSLGY Y+N+ P
Sbjct: 3 ASGPGYPLASLYVGDLPPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + + IRIM+S RDP +RKSG GNIFIKNL+ SID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFEVIKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D G S+GFGFV FE E+AQNAI +NGML+ND++VFVGHF ++ERE
Sbjct: 123 GNILSCKVVCDEHG-SRGFGFVHFETHEAAQNAISTMNGMLLNDRKVFVGHFKSRREREV 181
Query: 202 V--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
A +F N++VKNL ++ L+ +F ++G + S VMRD G S+ FGFVNFE
Sbjct: 182 ELGARAMEFTNIYVKNLHVDVDEQRLQDLFSQFGKMLSVKVMRDDSGHSRGFGFVNFEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
++A KAV +NG++ R YVG+AQK+ ER+ ELK +FEQ ++ + ++QG+NLY+KNL
Sbjct: 242 EEAQKAVVNMNGREVSGRLLYVGRAQKRVERQNELKRRFEQMKQDRLTRYQGVNLYVKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
DSIDDEKL++ FS +G ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +
Sbjct: 302 DDSIDDEKLRKEFSPYGVITSAKVMTE-GGHSKGFGFVCFSSPEEATKAVTEMNGRIVGT 360
Query: 380 KPLYVAVAQRKEERRARLQAQFSQ----MRPV---AMGPSVPPRMPMYPPGPSGLGQQFL 432
KPLYVA+AQRKEER+A L Q+ Q MR + +G P P P Q
Sbjct: 361 KPLYVALAQRKEERKAILTNQYMQRLSTMRALGGPVLGSFQQPASYFLPAVPQPPAQAQY 420
Query: 433 YGQAPPAIIPPQM---PPRGHAYRY----------PLGRNMQ---DFPFDM-------GA 469
YG PP P+ PPR R P+G + Q P +
Sbjct: 421 YGSGPPIQPAPRWTAQPPRPSCDRLPARVSRRPLAPVGSSRQLSTHMPHLVPHTQRVANI 480
Query: 470 GSMLPVPVDMGAGIPRRDA-------------SVGQPM-------PITALSTALANASPE 509
G+ P G P R V +P P+TA + LA A
Sbjct: 481 GTQTIGPSVTGCSTPSRPLLTHKYSTPAHCTDRVQEPAVCVLGQEPLTA--STLAAAPLH 538
Query: 510 QQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRS 569
+Q+ ++GE L+PLV + A K+TGMLLE+D +E+L +LESPE+L AKV EA+ VL++
Sbjct: 539 EQKQMIGERLFPLVYNVHAHLAGKITGMLLEIDNSELLLMLESPESLNAKVEEALAVLQA 598
>gi|321466794|gb|EFX77787.1| polyadenylate binding protein, cytoplasmic 1 [Daphnia pulex]
Length = 574
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 273/563 (48%), Positives = 377/563 (66%), Gaps = 28/563 (4%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
+G + SLYVGDL VT++ L++ FS G V+S+RVCRD+ TRRSLGY YVN+ PA
Sbjct: 5 AGANYPIASLYVGDLHNEVTEAMLFEKFSTAGPVVSIRVCRDMITRRSLGYAYVNFQQPA 64
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
DA RALD +NF L + IRIM+S RDPS+R+SG GNIFIKNLDK+ID+KA++DTFS+FG
Sbjct: 65 DAERALDSMNFDVLRGRPIRIMWSQRDPSLRRSGVGNIFIKNLDKTIDNKAMYDTFSAFG 124
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERE-T 201
NILSCK+A D +G SKG+GFV FE +ESA NAI K+NGML+N K+VFVG F+ +++RE
Sbjct: 125 NILSCKVAQDEAGNSKGYGFVHFETEESAVNAITKVNGMLLNGKKVFVGRFIPRKDRERE 184
Query: 202 VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
+ K K F NV++KN + DE L + F +YG +TS VM DGKS+ FGFV +E+ D
Sbjct: 185 LGEKAKYFTNVYIKNFGDEFDDEKLFECFSKYGKVTSHKVMSSDDGKSRGFGFVCYEDPD 244
Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
A +A + ++ K + + +VG+AQK++ER+ EL+ +FEQ E ++++QG+NLY+KNL
Sbjct: 245 AAERACDDMHAKDMNGKTLFVGRAQKRNERQTELRRKFEQMKIERLNRYQGVNLYVKNLD 304
Query: 321 DSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSK 380
D+IDDE+L++ F+ +GTITS KVM + G GFV FS+PEEA++A+ EMNG+++VSK
Sbjct: 305 DTIDDERLRKEFAPYGTITSAKVMTEGGRNKGGFGFVCFSSPEEATKAVTEMNGRILVSK 364
Query: 381 PLYVAVAQRKEERRARLQAQFSQ----MRPVAMGPSVPPRMPMY----PPGPSGL---GQ 429
PLYVA+AQRKE+R+A+L +Q+ Q MR MG P P Y P P Q
Sbjct: 365 PLYVALAQRKEDRKAQLASQYMQRMAGMRMQQMGQMFQPGGPGYFMPAPIQPQRFYTPAQ 424
Query: 430 QFLYGQAPPAIIPPQMPPRGHAYRYPLGRN---MQDFPFDMGAGSMLPVPVDMGAGIPRR 486
+ P PQ PR P RN P + GS AG ++
Sbjct: 425 MAQFRATPRWSAQPQ--PRPGFKFTPAMRNPPSQGSLPSNAMGGS--------AAGGMQQ 474
Query: 487 DASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEV 546
V P+TA + LA+A+P Q+ +LGE L+PL++++ D A K+TGMLLE+D +E+
Sbjct: 475 ALVVQGQEPLTA--SMLASAAPNDQKQMLGERLFPLIQRMYPDMAGKITGMLLEIDNSEL 532
Query: 547 LHLLESPEALKAKVAEAMEVLRS 569
LH+LE E+LKAKV EA+ VL++
Sbjct: 533 LHMLEHNESLKAKVDEAVAVLQA 555
>gi|47217896|emb|CAG05018.1| unnamed protein product [Tetraodon nigroviridis]
Length = 558
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 274/553 (49%), Positives = 370/553 (66%), Gaps = 40/553 (7%)
Query: 50 FSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRD 109
FS G +LS+RVCRD+ TRRSLGY YVN+ PADA RALD +NF + + +RIM+S RD
Sbjct: 18 FSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGRPLRIMWSQRD 77
Query: 110 PSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKE 169
PS+RKSG GNIFIKNLDKSID+KAL+DTFS+FGNILSCK+ D +G SKG+GFV FE E
Sbjct: 78 PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETHE 136
Query: 170 SAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTKFNNVFVKNLDESTTDEDLKK 227
+A+ AI+K+NGML+ND++VFVG F ++ERE A +F NV++KN E DE LK+
Sbjct: 137 AAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAREFTNVYIKNFGEDMDDEKLKE 196
Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
+F +YG S VM D GKSK FGFV+FE +DA KAV+ +NGK+ + R+ YVG+AQKK
Sbjct: 197 LFSKYGPALSIRVMTDDSGKSKGFGFVSFERHEDAQKAVDDMNGKELNGRQVYVGRAQKK 256
Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
ER+ ELK +FEQ ++ + ++QG+NLY+KNL D +DDE+L++ FS FGTITS KVM +
Sbjct: 257 GERQNELKRKFEQMKQDRMTRYQGVNLYVKNLDDGLDDERLRKEFSPFGTITSAKVMME- 315
Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPV 407
G SKG GFV FS+PEEA++A+ EMNG+++ +KPLYVA+AQRKEER+A L Q+ Q
Sbjct: 316 GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMAT 375
Query: 408 AMGPSVPPRMPMYPPGPSGL---------GQQFLYGQAPPAIIPPQMPPR-------GHA 451
P P P PSG + Y A + P PR H+
Sbjct: 376 VRAVPNPVLNPYQPAPPSGYFMAAIPQTQNRAAYYSANQLAQLRPS--PRWNDSRECAHS 433
Query: 452 YRYPLG-RNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALSTALANASPEQ 510
Y+Y G RN Q S V + A + + GQ P+TA + LA+A P++
Sbjct: 434 YKYAAGVRNPQQH-----MASQPQVAMQQPAVLVQ-----GQE-PLTA--SMLASAPPQE 480
Query: 511 QRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRS- 569
Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE+L++K+ EA+ VL++
Sbjct: 481 QKQMLGERLFPLIQDVHPSLAGKITGMLLEIDNSELLHMLESPESLRSKMDEAVAVLQAH 540
Query: 570 ---VAQQQANNPA 579
A Q++ PA
Sbjct: 541 QAKEAAQKSTTPA 553
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 112/291 (38%), Positives = 169/291 (58%), Gaps = 23/291 (7%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ +LD ++ + LYD FS G +LS +V D + S GYG+V++ A RA++
Sbjct: 87 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETHEAAERAIEK 144
Query: 91 LNFTPLNNKSIRI----MYSHRDPSI--RKSGTGNIFIKNLDKSIDHKALHDTFSSFGNI 144
+N LN++ + + R+ + R N++IKN + +D + L + FS +G
Sbjct: 145 MNGMLLNDRKVFVGRFKSRKEREAELGARAREFTNVYIKNFGEDMDDEKLKELFSKYGPA 204
Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAI 204
LS ++ TD SG+SKGFGFV FE E AQ A+D +NG +N +QV+VG +K ER+ +
Sbjct: 205 LSIRVMTDDSGKSKGFGFVSFERHEDAQKAVDDMNGKELNGRQVYVGRAQKKGERQN-EL 263
Query: 205 KTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCF 251
K KF N++VKNLD+ DE L+K F +GTITSA VM +G G+SK F
Sbjct: 264 KRKFEQMKQDRMTRYQGVNLYVKNLDDGLDDERLRKEFSPFGTITSAKVMMEG-GRSKGF 322
Query: 252 GFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAM 302
GFV F + ++A KAV +NG+ + YV AQ+K ER+ L Q+ Q M
Sbjct: 323 GFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRM 373
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 108/197 (54%), Gaps = 22/197 (11%)
Query: 21 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYAN 80
GA +F T++Y+ + ++ D +L +LFS+ G LS+RV D S +S G+G+V++
Sbjct: 171 GARAREF--TNVYIKNFGEDMDDEKLKELFSKYGPALSIRVMTDDSG-KSKGFGFVSFER 227
Query: 81 PADAARALDVLNFTPLNNKSIRIMYSHR-----------------DPSIRKSGTGNIFIK 123
DA +A+D +N LN + + + + + D R G N+++K
Sbjct: 228 HEDAQKAVDDMNGKELNGRQVYVGRAQKKGERQNELKRKFEQMKQDRMTRYQGV-NLYVK 286
Query: 124 NLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLI 183
NLD +D + L FS FG I S K+ +G G+SKGFGFV F + E A A+ ++NG ++
Sbjct: 287 NLDDGLDDERLRKEFSPFGTITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTEMNGRIV 345
Query: 184 NDKQVFVGHFLRKQERE 200
K ++V RK+ER+
Sbjct: 346 ATKPLYVALAQRKEERQ 362
>gi|432881580|ref|XP_004073850.1| PREDICTED: polyadenylate-binding protein 1-like [Oryzias latipes]
Length = 631
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 285/622 (45%), Positives = 388/622 (62%), Gaps = 76/622 (12%)
Query: 27 FLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAAR 86
+ SLYVGDL +VT++ LY+ FS G ++S+RVCRD+ TRRSLGY YVN+ PADA R
Sbjct: 8 YPIASLYVGDLHQDVTEAMLYEKFSPAGAIVSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 87 ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
ALD +NF + + +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FGNILS
Sbjct: 68 ALDTMNFDVIKGQPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AI 204
CK+ D +G S+G+GFV FE ++A+ AI+K+NGML+ND++VFVG F ++ERE A
Sbjct: 128 CKVVCDENG-SRGYGFVHFETHDAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAR 186
Query: 205 KTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAK 264
+F NV++KN E DE LK+IF ++G TS VM D G + FGFV+FEN +DA K
Sbjct: 187 AREFTNVYIKNFGEDMDDEKLKEIFSKFGNATSVRVMTDESGGGRGFGFVSFENHEDAQK 246
Query: 265 AVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSID 324
AV+ +NGK+ + R +VG+AQKK ER+ ELK +FEQ ++ ++QG+NLY+KNL D ID
Sbjct: 247 AVDEMNGKELNGRIMFVGRAQKKMERQMELKRRFEQMKQDRTTRYQGVNLYVKNLDDGID 306
Query: 325 DEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYV 384
DE+L++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +KPLYV
Sbjct: 307 DERLRKEFSPFGSITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Query: 385 AVAQRKEERRARLQAQFSQ------------MRPVAMGP-------SVP---PRMPMYP- 421
A+AQRKEER+A L Q+ Q M P P ++P R YP
Sbjct: 366 ALAQRKEERQAHLITQYMQRVANARAAANPVMNPYQPAPPSGFIMTAIPQAQSRSAYYPT 425
Query: 422 --------PGPSGLGQQFL--YGQAPPAIIPPQMPPRGHAYRYPLGRNMQDFPFDM---- 467
PGP Q + Q P ++ PPR + R P M
Sbjct: 426 AGQMAQLRPGPRWTTQSVRPQHFQNMPGVM---RPPRPRPQNFSTVRASSQVPPMMNTQR 482
Query: 468 -GAGSMLPV-PVDMGA----GIPRRDASVGQPMPITALST-------------------- 501
A S P PV A G P+ S G P ++T
Sbjct: 483 VAAQSSGPRHPVATAATHVRGGPQYKYSTGVRNPQQHVATQPQVTLQPAVHIQGQEPLTA 542
Query: 502 ALANASP-EQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKV 560
++ A+P ++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE+L++KV
Sbjct: 543 SMLAAAPLQEQKQMLGERLFPLIQNMHPSLAGKITGMLLEIDNSELLHMLESPESLRSKV 602
Query: 561 AEAMEVL-----RSVAQQQANN 577
EA+ VL + VAQ+ A N
Sbjct: 603 DEAVAVLQAHQAKEVAQKPATN 624
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 109/204 (53%), Gaps = 28/204 (13%)
Query: 21 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYAN 80
GA +F T++Y+ + ++ D +L ++FS+ G SVRV D S G+G+V++ N
Sbjct: 184 GARAREF--TNVYIKNFGEDMDDEKLKEIFSKFGNATSVRVMTDESG-GGRGFGFVSFEN 240
Query: 81 PADAARALDVLNFTPLNNKSIRIMYSHR--------------------DPSIRKSGTGNI 120
DA +A+D +N LN RIM+ R D + R G N+
Sbjct: 241 HEDAQKAVDEMNGKELNG---RIMFVGRAQKKMERQMELKRRFEQMKQDRTTRYQGV-NL 296
Query: 121 FIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNG 180
++KNLD ID + L FS FG+I S K+ +G G+SKGFGFV F + E A A+ ++NG
Sbjct: 297 YVKNLDDGIDDERLRKEFSPFGSITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTEMNG 355
Query: 181 MLINDKQVFVGHFLRKQERETVAI 204
++ K ++V RK+ER+ I
Sbjct: 356 RIVATKPLYVALAQRKEERQAHLI 379
>gi|114682135|ref|XP_514668.2| PREDICTED: poly(A) binding protein, cytoplasmic 1-like isoform 2
[Pan troglodytes]
gi|397511247|ref|XP_003825989.1| PREDICTED: polyadenylate-binding protein 1-like [Pan paniscus]
Length = 614
Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust.
Identities = 279/604 (46%), Positives = 378/604 (62%), Gaps = 60/604 (9%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
ASG+ + SLYVGDL +VT++ LY+ FS G +LS+RVCRD++TRRSLGY Y+N+ P
Sbjct: 3 ASGSGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF L + IRIM+S RDP +RKSG GNIFIKNL+ SID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+A D G S+GFGFV FE E+AQ AI+ +NGML+ND++VFVGHF ++ERE
Sbjct: 123 GNILSCKVACDEHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRREREA 181
Query: 202 V--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
A +F N++VKNL ++ L+++F ++G + S VMRD G S+CFGFVNFE
Sbjct: 182 ELGARALEFTNIYVKNLPVDVDEQGLQELFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
++A KAV +NGK+ R Y G+AQK+ ER+ ELK +FEQ ++ + ++QG+NLY+KNL
Sbjct: 242 EEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
DSIDD+KL++ FS +G ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +
Sbjct: 302 DDSIDDDKLRKEFSPYGVITSAKVMTE-GGHSKGFGFVCFSSPEEATKAVTEMNGRIVGT 360
Query: 380 KPLYVAVAQRKEERRARLQAQFSQ----MRPVA---MGPSVPPRMPMYPPGPSGLGQQFL 432
KPLYVA+AQRKEER+A L Q+ Q MR ++ +G P P P Q
Sbjct: 361 KPLYVALAQRKEERKAILTNQYMQRLSTMRTLSNPLLGSFQQPSSYFLPAMPQPPAQAAY 420
Query: 433 YGQAP-----PAIIPPQMPPRG----------------------------------HAYR 453
YG P PA PPR H R
Sbjct: 421 YGCGPVTPTQPAPRWTSQPPRPSCASMVRPPVVPRRPPAHISSVRQASTQVPRTVPHTQR 480
Query: 454 YPLGRNMQDFPFDMGAGS----MLPVPVDMGAGIPRR--DASVGQP--MPITALSTALAN 505
P +G + +LP A R + +V P P+TA + LA
Sbjct: 481 VANIGTQTTGPSGVGCCTPGRPLLPCKCSSAAHSTYRVQEPAVHIPGQEPLTA--SMLAA 538
Query: 506 ASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAME 565
A +Q+ ++GE LYPL+ + A K+TGMLLE+D +E+L +LESPE+L AK+ EA+
Sbjct: 539 APLHEQKQMIGERLYPLIHDVHTQLAGKITGMLLEIDNSELLLMLESPESLHAKIDEAVA 598
Query: 566 VLRS 569
VL++
Sbjct: 599 VLQA 602
>gi|156554126|ref|XP_001604025.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1 [Nasonia
vitripennis]
Length = 627
Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust.
Identities = 286/623 (45%), Positives = 391/623 (62%), Gaps = 89/623 (14%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL ++T++ L++ FS G VLS+RVCRD TRRSLGY YVN+ PADA RALD
Sbjct: 12 SLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDAVTRRSLGYAYVNFQQPADAERALDT 71
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF + + IRIM+S RDPS+R+SG GN+FIKNLDK+ID+KA++DTFS+FGNILSC++A
Sbjct: 72 MNFDIIKGRPIRIMWSQRDPSLRRSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCRVA 131
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET-VAIKTK-F 208
D SG SKG+GFV FE +E+A +ID++NGML+N K+V+VG F+ ++ERE + K K F
Sbjct: 132 QDESGSSKGYGFVHFETEEAANKSIDRVNGMLLNGKKVYVGKFISRKEREKELGEKAKLF 191
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NV+VKN E TD+ LK++F +YGTITS VM DGKS+ FGFV FE+ + A +AV
Sbjct: 192 TNVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMSKDDGKSRGFGFVAFEDPNAADRAVAD 251
Query: 269 LNGKKF-DDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEK 327
LNGK+ + + YVG+AQKK+ER+QELK +FEQ E ++++QG+NLY+KNL D+IDDE+
Sbjct: 252 LNGKEIAEGKIMYVGRAQKKAERQQELKRKFEQLKIERLNRYQGVNLYVKNLDDTIDDER 311
Query: 328 LKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 387
L++ F+ FGTITS KVM + G SKG GFV FS EEA++A+ EMNG+++ SKPLYVA+A
Sbjct: 312 LRKEFAPFGTITSVKVMME-DGRSKGFGFVCFSLAEEATKAVTEMNGRIVGSKPLYVALA 370
Query: 388 QRKEERRARLQAQFSQ----MRPVAMG-------------PSVP---------------- 414
QRKE+R+A L +Q+ Q +R MG P++P
Sbjct: 371 QRKEDRKAHLASQYLQRVANIRMQHMGQVFQAGGAGSYFVPTLPQPQRFYGPAQMAQIRT 430
Query: 415 -PRMPMYP--PGPSGLGQQFLYGQAPPAIIPPQMPPRGHAYRYPLGRN---------MQD 462
PR P P P G F Q P + PR + + RN Q
Sbjct: 431 TPRWPAQPVRPNAQAAGSNFATMQT-----PFRAAPRAPTAQSSMARNALSARPITGQQA 485
Query: 463 FPFDMGAGSML-----------------------------PVPVDMGAGIPRRDA-SVGQ 492
P GA +M P + M A P + A +
Sbjct: 486 VP---GAANMQNRSMAGPAVGVSPQSRTSNYKYTANMRNPPQTMAMPAQTPAQQAVHIQG 542
Query: 493 PMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLES 552
P+TA + LA+A P++Q+ +LGE L+PL++ + K+TGMLLE+D +E+LH+LE
Sbjct: 543 QEPLTA--SMLADAPPQEQKQMLGERLFPLIQCMYPHLTGKITGMLLEIDNSELLHMLEH 600
Query: 553 PEALKAKVAEAMEVLRSVAQQQA 575
E+LKAKV EA+ VL++ +QA
Sbjct: 601 GESLKAKVEEAVAVLQAHQAKQA 623
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 101/195 (51%), Gaps = 29/195 (14%)
Query: 28 LTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARA 87
L T++YV + ++TD +L ++F + G + S +V +S G+G+V + +P A RA
Sbjct: 190 LFTNVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMSK-DDGKSRGFGFVAFEDPNAADRA 248
Query: 88 LDVLNFTPLNNKSI---RIMY-------SHRDPSIRKSGTG------------NIFIKNL 125
+ LN K I +IMY + R +++ N+++KNL
Sbjct: 249 V-----ADLNGKEIAEGKIMYVGRAQKKAERQQELKRKFEQLKIERLNRYQGVNLYVKNL 303
Query: 126 DKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLIND 185
D +ID + L F+ FG I S K+ + G+SKGFGFV F E A A+ ++NG ++
Sbjct: 304 DDTIDDERLRKEFAPFGTITSVKVMME-DGRSKGFGFVCFSLAEEATKAVTEMNGRIVGS 362
Query: 186 KQVFVGHFLRKQERE 200
K ++V RK++R+
Sbjct: 363 KPLYVALAQRKEDRK 377
Score = 42.7 bits (99), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
N++ +LYV +LD + D +L F+ G + SV+V + RS G+G+V ++ +A
Sbjct: 291 NRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSVKVM--MEDGRSKGFGFVCFSLAEEA 348
Query: 85 ARALDVLNFTPLNNKSIRIMYSHR 108
+A+ +N + +K + + + R
Sbjct: 349 TKAVTEMNGRIVGSKPLYVALAQR 372
>gi|2665654|gb|AAB88449.1| polyadenylate binding protein [Petromyzon marinus]
Length = 630
Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust.
Identities = 290/616 (47%), Positives = 381/616 (61%), Gaps = 73/616 (11%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
+G + SLY+GDL +VT++ LY+ FS G +LS+RVCRD+ TRRSLGY YVN+ PA
Sbjct: 4 AGPSYPMASLYIGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPA 63
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
DA RALD +NF + K IRIM+S RDPS+R+SG GNIFIKNLDKSID+KAL+DTFS+FG
Sbjct: 64 DAERALDTMNFDVVKGKPIRIMWSQRDPSLRRSGVGNIFIKNLDKSIDNKALYDTFSAFG 123
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 202
NILSCK+ D +G SKG+GFV FE +E+A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 124 NILSCKVVCDENG-SKGYGFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Query: 203 --AIKTKFNNVFVKNLDESTTDEDLKKIFGEY-GTITSAVVMRDGDGKSKCFGFVNFENA 259
A +F NV++KN + DE L++ F +Y G S VM D GKSK FGFV+FE
Sbjct: 183 FGAKAREFTNVYIKNFGDDMDDERLREYFEQYVGKTLSVKVMMDEGGKSKGFGFVSFERH 242
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAV+ +N K+ + R YVG+AQKK+ER+ ELK +FE +E + K+QG+NLY+KNL
Sbjct: 243 EDAQKAVDEMNTKELNGRAIYVGRAQKKAERQTELKRKFEMLKQERMSKYQGVNLYVKNL 302
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D+I+DE+L + FS FGTITS KVM + G S+G GFV FS+PEEA++A+ EMNG++I S
Sbjct: 303 DDNINDERLWKEFSPFGTITSAKVMME-EGRSRGFGFVCFSSPEEATKAVTEMNGRIIGS 361
Query: 380 KPLYVAVAQRKEERRARLQAQFSQ----MR------------------------------ 405
KPLYVA+AQRKEER+ L +QF Q MR
Sbjct: 362 KPLYVALAQRKEERKMHLTSQFMQRLAGMRAVPPSAIIGQYQPAAASGYFMAAMPQQAQG 421
Query: 406 ------PVAMGPSVP-PRMPM--YPPGPSGLGQQFLYG-QAPPAIIPPQMPPRGHAYRYP 455
P M P P PR P+ P G G Q + G PA P QM A
Sbjct: 422 RTAYYTPSPMAPMRPNPRWPLQVRPQGAHAAGFQAITGPMRQPAPRPTQMRTVNPASVPQ 481
Query: 456 LGRNMQ------DFPFDMGAGSMLP------------VPVDMGAGI----PRRDASVGQP 493
+ R Q FP LP P G G P+ +
Sbjct: 482 VPRASQGMMPRPTFPTQAAGPRALPGYKYTGSVRNPQQPGVQGPGAMQQAPQSAVHIQGQ 541
Query: 494 MPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESP 553
P+TA + LA A P +Q+ +LGE L+PL+ + A K+TGMLLE+D +E+LH+LESP
Sbjct: 542 EPLTA--SMLAAAPPHEQKQMLGERLFPLIHGMYPTLAGKITGMLLEIDNSELLHMLESP 599
Query: 554 EALKAKVAEAMEVLRS 569
E+L+AKV EA+ VL++
Sbjct: 600 ESLRAKVEEAVAVLQA 615
>gi|297707183|ref|XP_002830392.1| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Pongo
abelii]
Length = 614
Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust.
Identities = 278/604 (46%), Positives = 378/604 (62%), Gaps = 60/604 (9%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
ASG+ + SLYVGDL +VT++ LY+ FS G +LS+RVCRD++TRRSLGY Y+N+ P
Sbjct: 3 ASGSGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF L + IRIM+S RDP +RKSG GNIFIKNL+ SID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+A D G S+GFGFV FE E+AQ AI+ +NGML+ND++VFVGHF ++ERE
Sbjct: 123 GNILSCKVACDEHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRREREA 181
Query: 202 V--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
A +F N++VKNL ++ L+ +F ++G + S VMRD G S+CFGFVNFE
Sbjct: 182 ELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
++A KAV +NGK+ R Y G+AQK+ ER+ ELK +FEQ ++ + ++QG+NLY+KNL
Sbjct: 242 EEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
DSIDD+KL++ FS +G ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +
Sbjct: 302 DDSIDDDKLRKEFSPYGVITSAKVMTE-GGHSKGFGFVCFSSPEEATKAVTEMNGRIVGT 360
Query: 380 KPLYVAVAQRKEERRARLQAQFSQ----MRPVA---MGPSVPPRMPMYPPGPSGLGQQFL 432
KPLYVA+AQRKEER+A L Q+ Q MR ++ +G P P P Q
Sbjct: 361 KPLYVALAQRKEERKAILTNQYMQRLSTMRTLSNPLLGSFQQPSSYFLPAVPQPPAQAAY 420
Query: 433 YGQAP-----PAIIPPQMPPR---------------GHAYRYPLGRNMQDFPFDM----- 467
YG P PA PPR A+ + + P +
Sbjct: 421 YGCGPVTPTQPAPRWTSQPPRPSCASVVRPPVVPRRPPAHISSVRQASTQVPHTVPHTQR 480
Query: 468 --GAGSMLPVPVDMGAGIPRR-------------DASVGQPM-------PITALSTALAN 505
G+ P +G P R V +P P+TA + LA
Sbjct: 481 VANIGTQTTGPSGVGCCTPGRPLLPYKCSSAAHSTYRVQEPAVHIPGQEPLTA--SMLAA 538
Query: 506 ASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAME 565
A +Q+ ++GE LYPL+ + A K+TGMLLE+D +E+L +LESPE+L AK+ EA+
Sbjct: 539 APLHEQKQMIGERLYPLIHDVHTQLAGKITGMLLEIDNSELLLMLESPESLHAKIDEAVA 598
Query: 566 VLRS 569
VL++
Sbjct: 599 VLQA 602
>gi|406698471|gb|EKD01707.1| polyadenylate-binding protein [Trichosporon asahii var. asahii CBS
8904]
Length = 686
Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust.
Identities = 277/607 (45%), Positives = 375/607 (61%), Gaps = 64/607 (10%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVG+LD +VT++ L+++F+ VG V S+RVCRD TRRSLGY YVNY N AD RAL
Sbjct: 56 SASLYVGELDPSVTEAMLFEIFNMVGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERAL 115
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LN++ + N+ RIM+S RDP++RK+G GNIFIKNLD ID+KALHDTF++FGNILSCK
Sbjct: 116 EHLNYSLIKNRPCRIMWSQRDPALRKTGQGNIFIKNLDDKIDNKALHDTFAAFGNILSCK 175
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVA--IKT 206
+ATD +G S+GF FV +E E+A AI +NGML+NDK+V+VGH + K+ER++ +
Sbjct: 176 VATDENGNSRGFAFVHYETGEAADAAIKSVNGMLLNDKKVYVGHHISKKERQSKVEEQRA 235
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
KF N+F+KNL+ T +DL+ +F +G I SA + DG SK F FVN+ D A KAV
Sbjct: 236 KFTNIFIKNLEPEFTQKDLEDMFKPFGEIVSAALSVGEDGLSKGFAFVNYTTHDAAKKAV 295
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
+ LN K+ + ++ YVG+AQK++ER++EL+ E+ E K G+NLY+KN+ D DD+
Sbjct: 296 DELNDKEINGKKLYVGRAQKRAERDEELRRMHEERRLENESKTAGVNLYVKNIDDEWDDD 355
Query: 327 KLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 386
+L+ F GTITS KVMRD G S+G GFV FS P+EA+RA+ EMNGKMI +KPLYV++
Sbjct: 356 RLRSEFDFAGTITSAKVMRDDKGASRGFGFVCFSQPDEATRAVQEMNGKMIGTKPLYVSL 415
Query: 387 AQRKEERRARLQAQFSQ------------------------MRPVAMGPSVPPRMPM--- 419
AQ+KE RR L++Q Q M MGP P MP+
Sbjct: 416 AQKKEVRRQALESQMQQRNAQRLQYAAANGLGGPQGYMQAPMYYPPMGPYGGPMMPVRGG 475
Query: 420 ---YPPGPSGLGQQFLYGQAPPAIIPPQ------MPPRGHAYRYPLGRNMQDFPFDMGAG 470
YP P +G + G+ PP+ P MPP G YP M ++P
Sbjct: 476 VVGYPGAPPMMGAR--PGRYPPSGQPGAPVPMGYMPPGGAGGNYP---GMPNYPVRPAGN 530
Query: 471 SMLPV-------PVDMGAGIPR-----------RDASVGQPMPITALSTALANASPEQQR 512
+ P P G+PR A+ GQP +TA ALA ASP +Q+
Sbjct: 531 ARPPTAARPNGSPSGAQQGLPRGQVPARPQGDGAQAAAGQPR-LTA--QALARASPGEQK 587
Query: 513 TLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQ 572
+LGE++YPL+ + + + A K+TGMLLEMD E+LHL+ESP AL KV EA+ VL +
Sbjct: 588 QMLGEAIYPLIHESQPELAGKITGMLLEMDNAELLHLVESPAALTEKVDEALRVLEDWGK 647
Query: 573 QQANNPA 579
PA
Sbjct: 648 NDEEKPA 654
>gi|426391820|ref|XP_004062264.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1 [Gorilla
gorilla gorilla]
Length = 614
Score = 503 bits (1295), Expect = e-139, Method: Compositional matrix adjust.
Identities = 279/604 (46%), Positives = 377/604 (62%), Gaps = 60/604 (9%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
ASG+ + SLYVGDL +VT++ LY+ FS G +LS+RVCRD++TRRSLGY Y+N+ P
Sbjct: 3 ASGSGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF L + IRIM+S RDP +RKSG GNIFIKNL+ SID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+A D G S+GFGFV FE E+AQ AI+ +NGML+ND++VFVGHF ++ERE
Sbjct: 123 GNILSCKVACDEHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRREREA 181
Query: 202 V--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
A +F N++VKNL ++ L+ +F ++G + S VMRD G S+CFGFVNFE
Sbjct: 182 ELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
++A KAV +NGK+ R Y G+AQK+ ER+ ELK +FEQ ++ + ++QG+NLY+KNL
Sbjct: 242 EEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
DSIDD+KL++ FS +G ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +
Sbjct: 302 DDSIDDDKLRKEFSPYGVITSAKVMTE-GGHSKGFGFVCFSSPEEATKAVTEMNGRIVGT 360
Query: 380 KPLYVAVAQRKEERRARLQAQFSQ----MRPVA---MGPSVPPRMPMYPPGPSGLGQQFL 432
KPLYVA+AQRKEER+A L Q+ Q MR ++ +G P P P Q
Sbjct: 361 KPLYVALAQRKEERKAILTNQYMQRLSTMRTLSNPLLGSFQQPSSYFLPAMPQPPAQAAY 420
Query: 433 YGQAP-----PAIIPPQMPPRG----------------------------------HAYR 453
YG P PA PPR H R
Sbjct: 421 YGCGPVTPTQPAPRWTSQPPRPSCASVVRPPAVPRRPPAHISSVRQASTQVPRTVPHTQR 480
Query: 454 YPLGRNMQDFPFDMGAGS----MLPVPVDMGAGIPRR--DASVGQP--MPITALSTALAN 505
P +G + +LP A R + +V P P+TA + LA
Sbjct: 481 VANIGTQTTGPSGVGCCTPGRPLLPCKCSSAAHSTYRVQEPAVHIPGQEPLTA--SMLAA 538
Query: 506 ASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAME 565
A +Q+ ++GE LYPL+ + A K+TGMLLE+D +E+L +LESPE+L AK+ EA+
Sbjct: 539 APLHEQKQMIGERLYPLIHDVHTQLAGKITGMLLEIDNSELLLMLESPESLHAKIDEAVA 598
Query: 566 VLRS 569
VL++
Sbjct: 599 VLQA 602
>gi|185135971|ref|NP_001118228.1| polyadenylate-binding protein 1-like [Homo sapiens]
gi|74754038|sp|Q4VXU2.1|PAP1L_HUMAN RecName: Full=Polyadenylate-binding protein 1-like
gi|119596298|gb|EAW75892.1| hCG2019100, isoform CRA_f [Homo sapiens]
Length = 614
Score = 503 bits (1295), Expect = e-139, Method: Compositional matrix adjust.
Identities = 279/604 (46%), Positives = 377/604 (62%), Gaps = 60/604 (9%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
ASG+ + SLYVGDL +VT++ LY+ FS G +LS+RVCRD++TRRSLGY Y+N+ P
Sbjct: 3 ASGSGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF L + IRIM+S RDP +RKSG GNIFIKNL+ SID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+A D G S+GFGFV FE E+AQ AI+ +NGML+ND++VFVGHF ++ERE
Sbjct: 123 GNILSCKVACDEHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRREREA 181
Query: 202 V--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
A +F N++VKNL ++ L+ +F ++G + S VMRD G S+CFGFVNFE
Sbjct: 182 ELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
++A KAV +NGK+ R Y G+AQK+ ER+ ELK +FEQ ++ + ++QG+NLY+KNL
Sbjct: 242 EEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
DSIDD+KL++ FS +G ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +
Sbjct: 302 DDSIDDDKLRKEFSPYGVITSAKVMTE-GGHSKGFGFVCFSSPEEATKAVTEMNGRIVGT 360
Query: 380 KPLYVAVAQRKEERRARLQAQFSQ----MRPVA---MGPSVPPRMPMYPPGPSGLGQQFL 432
KPLYVA+AQRKEER+A L Q+ Q MR ++ +G P P P Q
Sbjct: 361 KPLYVALAQRKEERKAILTNQYMQRLSTMRTLSNPLLGSFQQPSSYFLPAMPQPPAQAAY 420
Query: 433 YGQAP-----PAIIPPQMPPRG----------------------------------HAYR 453
YG P PA PPR H R
Sbjct: 421 YGCGPVTPTQPAPRWTSQPPRPSCASMVRPPVVPRRPPAHISSVRQASTQVPRTVPHTQR 480
Query: 454 YPLGRNMQDFPFDMGAGS----MLPVPVDMGAGIPRR--DASVGQP--MPITALSTALAN 505
P +G + +LP A R + +V P P+TA + LA
Sbjct: 481 VANIGTQTTGPSGVGCCTPGRPLLPCKCSSAAHSTYRVQEPAVHIPGQEPLTA--SMLAA 538
Query: 506 ASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAME 565
A +Q+ ++GE LYPL+ + A K+TGMLLE+D +E+L +LESPE+L AK+ EA+
Sbjct: 539 APLHEQKQMIGERLYPLIHDVHTQLAGKITGMLLEIDNSELLLMLESPESLHAKIDEAVA 598
Query: 566 VLRS 569
VL++
Sbjct: 599 VLQA 602
>gi|412991277|emb|CCO16122.1| predicted protein [Bathycoccus prasinos]
Length = 620
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 244/392 (62%), Positives = 309/392 (78%), Gaps = 7/392 (1%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
TSLYVGDL+ + T++QLY+LFS +G V+S+RVCRDL TRRSLGY YVN++ DAARA+D
Sbjct: 43 TSLYVGDLESSATEAQLYELFSTIGPVVSIRVCRDLITRRSLGYAYVNFSQAQDAARAID 102
Query: 90 VLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKI 149
VLNF +N K IRI+YS RDP+IRKSG GNIFIKNLDK ID AL DTF+ FGNI+S K+
Sbjct: 103 VLNFQVVNGKPIRILYSQRDPTIRKSGVGNIFIKNLDKDIDTVALRDTFAQFGNIVSAKV 162
Query: 150 ATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFN 209
ATDG G SKG+GF+QF+ + +A+ AI+K+NGM +NDK V+VG F R+ ER T +TKFN
Sbjct: 163 ATDGQGNSKGYGFIQFDTEAAAKEAIEKVNGMELNDKVVYVGPFQRRAERGTT--ETKFN 220
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEAL 269
NVFVKNL + TDE+L+K+F +G +TS ++ +D DGKSK FGFV +E +DA+KAVE L
Sbjct: 221 NVFVKNLGDEVTDEELRKVFEGFGPVTSVMISKDEDGKSKGFGFVCYETPEDASKAVEEL 280
Query: 270 NGKKF-DDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
+GK +D++W V +AQKK+ERE ELK +FE +E ++K G NLYIKNL D DDE L
Sbjct: 281 DGKHGEEDKKWVVCRAQKKAEREAELKAKFEAERRERMEKMAGANLYIKNLEDGADDETL 340
Query: 329 KELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
+ELF EFGTITSC+VMRD SG+S+GS FVAFS+PEEA+RA+ E+NGKM+ +KPLYVA+AQ
Sbjct: 341 RELFKEFGTITSCRVMRDASGVSRGSAFVAFSSPEEATRAVTELNGKMVGAKPLYVALAQ 400
Query: 389 RKEERRARLQAQFSQMRPVAMGPSVPPRMPMY 420
RKE+RR RLQAQF+Q +MGP PMY
Sbjct: 401 RKEDRRMRLQAQFAQR---SMGPG-GVMAPMY 428
>gi|213409529|ref|XP_002175535.1| polyadenylate-binding protein [Schizosaccharomyces japonicus
yFS275]
gi|212003582|gb|EEB09242.1| polyadenylate-binding protein [Schizosaccharomyces japonicus
yFS275]
Length = 621
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 271/581 (46%), Positives = 367/581 (63%), Gaps = 50/581 (8%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
+GN + SLY+G+LD VT++ L++LF+ +G V S+RVCRD TRRSLGY YVN+ N
Sbjct: 62 NGNTSTSASLYIGELDPMVTEAMLFELFNSIGPVASIRVCRDAVTRRSLGYAYVNFHNME 121
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
D +ALD LN+T + + RIM+S RDPS+RK GTGN+FIKNLD +ID+KALHDTFS+FG
Sbjct: 122 DGEKALDELNYTLIKGRPCRIMWSQRDPSLRKMGTGNVFIKNLDPAIDNKALHDTFSAFG 181
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 202
ILSCK+A D G SKG+GFV F++ +SA AI+ +NGML+NDK+V+VGH + +++R++
Sbjct: 182 KILSCKVAVDELGNSKGYGFVHFDSVDSANAAIEHVNGMLLNDKKVYVGHHISRRDRQSK 241
Query: 203 --AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
A+K F NV+VKNLD TT+E+ K+F +YG ITS + +D GK + F FVNF D
Sbjct: 242 FEALKANFTNVYVKNLDLDTTEEEFTKLFEKYGKITSLSLAKDNAGKFRGFAFVNFATHD 301
Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
A +AV+ LN ++ ++ YVG+AQKK ER++EL+ Q+EQ E ++K+QG+NL++KNL
Sbjct: 302 SAQQAVDELNDFEYKGKKLYVGRAQKKHERQEELRKQYEQMKLEKINKYQGVNLFVKNLQ 361
Query: 321 DSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSK 380
D IDDE+LK FS FGTITS KVM D + SKG GFV +S PEEA++A+AEMN +M+ K
Sbjct: 362 DEIDDERLKSEFSAFGTITSAKVMTDENNKSKGFGFVCYSNPEEATKAIAEMNQRMLAGK 421
Query: 381 PLYVAVAQRKEERRARLQAQF---SQMR---------------------PVAMGPSVPPR 416
PLYVA+AQRKE RR++L+AQ +Q R P+ GP P
Sbjct: 422 PLYVALAQRKEVRRSQLEAQIQARNQFRLQQQVAAAAGIPAAAVQYGAAPIVFGPGGYPM 481
Query: 417 MPMYPPGPSGLGQQFLYGQAPPAIIP--PQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLP 474
P+ + G + GQ P IP MP G YP + P
Sbjct: 482 PPV-----NARGMPIVPGQ--PGAIPMYSGMPQYGAPGAYP---------------GVAP 519
Query: 475 VPVDMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKV 534
V G DA +P + LA A E ++ ++GE LYP V E + A K+
Sbjct: 520 AEVPAVEGDKPADAPTEAALPARLTAEDLARAPEENRKQMIGEFLYPKVYVREEELAGKI 579
Query: 535 TGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQA 575
TGMLLEMD +E+L LLE+ L KV EA+ VLR A ++A
Sbjct: 580 TGMLLEMDNSELLELLENDGMLNEKVDEALAVLREYAAKEA 620
>gi|194672643|ref|XP_882298.3| PREDICTED: poly(A) binding protein, cytoplasmic 1-like isoform 19
[Bos taurus]
gi|297482024|ref|XP_002692514.1| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Bos taurus]
gi|296480945|tpg|DAA23060.1| TPA: polyadenylate-binding protein 1-like [Bos taurus]
Length = 613
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 280/602 (46%), Positives = 376/602 (62%), Gaps = 58/602 (9%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
ASG + SLYVGDL +VT++ LY+ FS G +LS+RVCRD++TRRSLGY Y+N+ P
Sbjct: 3 ASGPGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + + IRIM+S RDP +RKSG GNIFIKNL+ SID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFEVIKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D G S+GFGFV FE E+AQNAI +NGML+ND++VFVGHF ++ERE
Sbjct: 123 GNILSCKVVCDEHG-SRGFGFVHFETHEAAQNAISTMNGMLLNDRKVFVGHFKSRREREV 181
Query: 202 V--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
A +F N++VKNL ++ L+ +F ++G + S VMRD G S+ FGFVNFE
Sbjct: 182 ELGARAMEFTNIYVKNLHVDVDEQRLQDLFSQFGKMLSVKVMRDDSGHSRGFGFVNFEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
++A KAV +NG++ R YVG+AQK+ ER+ ELK +FEQ ++ + ++QG+NLY+KNL
Sbjct: 242 EEAQKAVVNMNGREVSGRLLYVGRAQKRVERQNELKRRFEQMKQDRLTRYQGVNLYVKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
DSIDDEKL++ FS +G ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +
Sbjct: 302 DDSIDDEKLRKEFSPYGVITSAKVMTE-GGHSKGFGFVCFSSPEEATKAVTEMNGRIVGT 360
Query: 380 KPLYVAVAQRKEERRARLQAQFSQ----MRPVA---MGPSVPPRMPMYPPGPSGLGQQFL 432
KPLYVA+AQRKEER+A L Q+ Q MR + +G P P P Q
Sbjct: 361 KPLYVALAQRKEERKAILTNQYMQRLSTMRALGGPILGSFQQPASYFLPAVPQPPAQAPY 420
Query: 433 YGQAPPAIIPPQM---PPRGHAYRY------------PLGRNMQ---DFPFDM------- 467
YG PP P+ PPR P+G + Q P +
Sbjct: 421 YGSGPPIQPAPRWTAQPPRPSCASVVRPAAMSRRPLTPVGSSRQVSTHVPHLVPHTQRVA 480
Query: 468 GAGSMLPVPVDMGAGIP-------------RRDASVGQPM-------PITALSTALANAS 507
G+ P G P R V +P P+TA + LA A
Sbjct: 481 NIGTQTTGPSMTGCSTPSRPLLTHTYSTPAHRTDRVQEPAVHVPGQEPLTA--SMLAAAP 538
Query: 508 PEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVL 567
+Q+ ++GE L+PLV + A K+TGMLLE+D +E+L +LESPE+L AKV EA+ VL
Sbjct: 539 LHEQKQMIGERLFPLVYNVHAHLAGKITGMLLEIDNSELLLMLESPESLNAKVEEALAVL 598
Query: 568 RS 569
++
Sbjct: 599 QA 600
>gi|213403408|ref|XP_002172476.1| polyadenylate-binding protein [Schizosaccharomyces japonicus
yFS275]
gi|212000523|gb|EEB06183.1| polyadenylate-binding protein [Schizosaccharomyces japonicus
yFS275]
Length = 662
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 275/580 (47%), Positives = 380/580 (65%), Gaps = 52/580 (8%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
+ GN TSLYVG+LD +VT++ L+++FS VG V S+RVCRD TR+SLGY YVNY N
Sbjct: 71 SDGNAPKNTSLYVGELDPSVTEAMLFEIFSTVGPVASIRVCRDAVTRQSLGYAYVNYHNA 130
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
D +AL+ LN++ + ++ RIM+S RDPS+RK+GTGNIFIKNLD +ID+KALHDTFS+F
Sbjct: 131 DDGEKALEELNYSLIKGRACRIMWSQRDPSLRKTGTGNIFIKNLDPAIDNKALHDTFSAF 190
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
G ILSCK+A D G SKG+GFV F + +SA AI+ +NGML+NDK+V+VGH + +++R++
Sbjct: 191 GTILSCKVALDEYGNSKGYGFVHFASIDSANAAIEHVNGMLLNDKKVYVGHHVSRRDRQS 250
Query: 202 V--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
A+K F NV++KN+D TDE+ +F ++G ITS +++D GK + FGFVNFE+
Sbjct: 251 KFEAMKANFTNVYIKNIDPEVTDEEFSGLFEKFGAITSFSLVKDESGKPRGFGFVNFESH 310
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+ A KAV+ +N +F ++ YVG+AQK+ ERE EL+ ++EQ E + K+QG+NL+IKNL
Sbjct: 311 EAAQKAVDEMNDYEFHGKKLYVGRAQKRHEREAELRKRYEQMKLEKMSKYQGVNLFIKNL 370
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D +DD LK FS FGTITS KVM D +G SKG GFV +S+PEEA++A+AEMN +M+
Sbjct: 371 SDEVDDNLLKTEFSAFGTITSAKVMTDENGKSKGFGFVCYSSPEEATKAIAEMNQRMLAG 430
Query: 380 KPLYVAVAQRKEERRARLQAQFS-------QMRPVAMGPSVPPRMP---MYPPG----PS 425
KPLYVA+AQRK+ RR++L+AQ Q + A G S +P Y PG P+
Sbjct: 431 KPLYVALAQRKDVRRSQLEAQIQARNQFRMQQQVAAAGMSAQFGIPGAMYYGPGGYPLPA 490
Query: 426 G--------------LGQQFLYGQAP-PAIIPPQMPPRGHAYRYPLGRNMQDFPFDMGAG 470
G G+ + G AP P ++P YP G +FP G
Sbjct: 491 GARGVPMPHPNMMPPNGKWPVDGAAPQPGMVP----------VYPPGVAAPNFP-----G 535
Query: 471 SMLP-VPVDMGAGIPRRDASVGQPMPITALS-TALANASPEQQRTLLGESLYPLVEQLER 528
P VP + AG ++AS G +P+ A A + +PE Q+ +LGE YPL+ Q E
Sbjct: 536 YPRPVVPSEQPAG---QEASNG-AVPVPAFDMNAFSAETPENQKQILGEYFYPLIAQREA 591
Query: 529 DAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLR 568
+ A K+TGMLLEMD E+L L++ EAL KV EA+ VL+
Sbjct: 592 ELAGKITGMLLEMDNAELLGLVQDIEALNGKVDEALSVLK 631
Score = 42.0 bits (97), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 50/108 (46%), Gaps = 1/108 (0%)
Query: 283 KAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCK 342
+ + K E QE + + + +LY+ L S+ + L E+FS G + S +
Sbjct: 50 ETESKKETTQEKSSEASSGTPSDGNAPKNTSLYVGELDPSVTEAMLFEIFSTVGPVASIR 109
Query: 343 VMRDP-SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQR 389
V RD + S G +V + ++ +AL E+N +I + + +QR
Sbjct: 110 VCRDAVTRQSLGYAYVNYHNADDGEKALEELNYSLIKGRACRIMWSQR 157
>gi|432937502|ref|XP_004082431.1| PREDICTED: polyadenylate-binding protein 4-like [Oryzias latipes]
Length = 629
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 290/612 (47%), Positives = 385/612 (62%), Gaps = 71/612 (11%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL ++T++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN++ PADA RALD
Sbjct: 12 SLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQPADAERALDT 71
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+FGNILSCK+
Sbjct: 72 MNFDVVKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVV 131
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET-VAIKTK-F 208
D +G SKG+ FV FE +++A AI+K+NGML+ND++VFVG F ++ERE + K K F
Sbjct: 132 CDENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEF 190
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NV++KN + DE LK++F +YG S VM D GKS+ FGFV+FE +DA KAVE
Sbjct: 191 TNVYIKNFGDEMEDEQLKEMFEKYGKTLSVKVMTDSSGKSRGFGFVSFEKHEDANKAVEE 250
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
+NG + + + +VG+AQKK ER+ ELK +FE +E + ++QG+NLYIKNL D+IDDEKL
Sbjct: 251 INGTELNGKTVFVGRAQKKMERQAELKRKFELLKQERISRYQGVNLYIKNLDDTIDDEKL 310
Query: 329 KELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ SKPLYVA+AQ
Sbjct: 311 RKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Query: 389 RKEERRARLQAQFSQ----MRPVAMGPSV------PPRMPMYPPGPSGLGQQFLYGQAPP 438
RKEER+A L Q+ Q MR AM P+ P P P + Y AP
Sbjct: 370 RKEERKAHLTNQYMQRIAGMR--AMPPNAIINQFQPTSGYFMPAVPQAQNRTTYY--APN 425
Query: 439 AIIPPQMPPRG---------------HAYRYPLGR-NMQDFPFDMGA-------GSMLPV 475
+ + PR + R P R NM+ G+ SM P
Sbjct: 426 QLAQMRPNPRWQQQGGRGQGGFQGMPSSLRQPGPRGNMRHMSPSGGSQGPRASGQSMAPR 485
Query: 476 PVDMGAGIPRR------DASVGQPMPITALSTAL--------------------ANASPE 509
P MG PR SV P P AL A A P+
Sbjct: 486 P-SMGVPGPRTMSPYKYATSVRNPNPQVVQPIALQQAQPAVHIQGQEPLTASMLAAAPPQ 544
Query: 510 QQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRS 569
+Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+LES E+L++KV EA+ VL++
Sbjct: 545 EQKQMLGERLFPLIQAMHANLAGKITGMLLEIDNSELLHMLESHESLQSKVEEAVAVLQA 604
Query: 570 VAQQQANNPADQ 581
QA A Q
Sbjct: 605 ---HQAKKDATQ 613
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 110/196 (56%), Gaps = 20/196 (10%)
Query: 21 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYAN 80
GA +F T++Y+ + + D QL ++F + G+ LSV+V D S+ +S G+G+V++
Sbjct: 184 GAKAKEF--TNVYIKNFGDEMEDEQLKEMFEKYGKTLSVKVMTD-SSGKSRGFGFVSFEK 240
Query: 81 PADAARALDVLNFTPLNNKSIRIMYSH----------------RDPSIRKSGTGNIFIKN 124
DA +A++ +N T LN K++ + + + I + N++IKN
Sbjct: 241 HEDANKAVEEINGTELNGKTVFVGRAQKKMERQAELKRKFELLKQERISRYQGVNLYIKN 300
Query: 125 LDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLIN 184
LD +ID + L FS FG+I S K+ + G+SKGFGFV F + E A A+ ++NG ++
Sbjct: 301 LDDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVG 359
Query: 185 DKQVFVGHFLRKQERE 200
K ++V RK+ER+
Sbjct: 360 SKPLYVALAQRKEERK 375
>gi|194224457|ref|XP_001500563.2| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Equus
caballus]
Length = 612
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 278/602 (46%), Positives = 373/602 (61%), Gaps = 58/602 (9%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
ASG + SLYVGDL +VT++ LY+ FS G +LS+RVCRD++TRRSLGY Y+N+ P
Sbjct: 3 ASGAGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + + IRIM+S RDP +RKSG GN+FIKNL+ SID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFEVIKGQPIRIMWSQRDPGLRKSGVGNVFIKNLEDSIDNKALYDTFSTF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D G S+GFGFV FE E+AQ AI +NGML+ND++VFVGHF ++ERE
Sbjct: 123 GNILSCKVVCDDHG-SRGFGFVHFETHEAAQQAISTMNGMLLNDRKVFVGHFKSRREREA 181
Query: 202 V--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
A T F N++VKNL + L+ +F ++G + S VMRD G S+ FGFVNFE
Sbjct: 182 ELGARATAFTNIYVKNLPGHVDERGLQDLFSQFGKMLSVKVMRDDSGHSRGFGFVNFEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
++A KAV +NG + R YVG+AQK+ ER+ ELK +FE ++ +++ QG+NLY+KNL
Sbjct: 242 EEAQKAVMDMNGMQVSGRLLYVGRAQKRGERQNELKRRFEHTKQDRLNRCQGVNLYVKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
DSIDDEKL++ FS +G ITS KVM + G SKG GFV FS+PEEA++A+ EMNG++I +
Sbjct: 302 DDSIDDEKLRKEFSPYGVITSAKVMTE-GGHSKGFGFVCFSSPEEATKAVTEMNGRIIGT 360
Query: 380 KPLYVAVAQRKEERRARLQAQFSQ----MRPVA---MGPSVPPRMPMYPPGPSGLGQQFL 432
KPLYVA+AQRKEER+A L Q+ Q MR + +G P P Q
Sbjct: 361 KPLYVALAQRKEERKAILTNQYMQRLSTMRALGGPFLGSFQQPTSYFLPAMAQPPAQAEH 420
Query: 433 YGQAP---PA---------------IIPPQMPPRGHAYRYPLGRNMQDFPFDM------- 467
YG +P PA + PP M R A + + P+ +
Sbjct: 421 YGSSPSRQPAPRWTTQPPRPSSASMVRPPAMSRRPLAQVCSVRQTSTQVPYLVPHTQRVA 480
Query: 468 GAGSMLPVPVDMGAGIPRRDASVGQ--------------------PMPITALSTALANAS 507
G+ P P G P R + P P+TA + LA A
Sbjct: 481 NIGTQTPGPGGAGCSTPGRSLPTHRYFLATPNTHEVQEPAVRILGPEPLTA--SMLAAAP 538
Query: 508 PEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVL 567
QQ+ ++GE LYPL+ ++ A K+TGMLLE+D +E+L +LESPE+L AKV EA+ VL
Sbjct: 539 LHQQKQMIGERLYPLIYEVHTQLAGKITGMLLEIDNSELLLMLESPESLNAKVEEALAVL 598
Query: 568 RS 569
++
Sbjct: 599 QA 600
>gi|409082274|gb|EKM82632.1| hypothetical protein AGABI1DRAFT_111221 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 671
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 277/624 (44%), Positives = 380/624 (60%), Gaps = 86/624 (13%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVG+LD VT++ L+++F+ +G V S+RVCRD TRRSLGY YVNY N AD RAL
Sbjct: 41 SASLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERAL 100
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LN++ + N++ RIM+S RDP++RK+G GN+FIKNLD++ID+KALHDTF +FGN+LSCK
Sbjct: 101 EQLNYSLIKNRACRIMWSQRDPALRKTGQGNVFIKNLDEAIDNKALHDTFVAFGNVLSCK 160
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKT 206
+ATD G+SKG+GFV +E E+A NAI +NGML+NDK+V+VGH + ++ER++ +K
Sbjct: 161 VATDEHGRSKGYGFVHYETAEAADNAIKSVNGMLLNDKKVYVGHHISRKERQSKLDEMKA 220
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
+F N+++KNLD T E+ ++F YG +TS++V D +GKSK FGFVN+E ++A +AV
Sbjct: 221 QFTNLYIKNLDTEVTQEEFTELFTRYGNVTSSLVATDEEGKSKGFGFVNYERHEEAQRAV 280
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
+ L+ ++ +V +AQKK+ERE EL+ +EQA E + K+QG+NLYIKNL D DD+
Sbjct: 281 DELHDTDLKGKKLFVARAQKKAEREDELRRSYEQAKLEKLSKYQGINLYIKNLEDDFDDD 340
Query: 327 KLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 386
KL+ F FG ITSCKVMRD G SKG GFV FS+P+EA++A+AEMN KMI +KPLYV++
Sbjct: 341 KLRAEFEPFGAITSCKVMRDEKGTSKGFGFVCFSSPDEATKAVAEMNNKMIGTKPLYVSL 400
Query: 387 AQRKEERRARLQAQFSQMRPVAM--------------GP--------------------- 411
AQR+E RR +L++Q +Q + M GP
Sbjct: 401 AQRREVRRQQLESQIAQRNQIRMQQAAAAGVPGGYINGPMYYPPGPGFPPQGRGMMGYGQ 460
Query: 412 --SVPPRMPMYPPG--PSGLGQQFLYGQAPPAIIPPQMPPRGHAYRYPLGRNMQDFPFDM 467
+PPR+ YP G PS YGQ P P PPRG A R P+ R P
Sbjct: 461 PGMMPPRI-RYPNGQVPSMPPVPGPYGQGPQPYGMPGYPPRG-APRPPVARGPGSSPTHP 518
Query: 468 G------------AGSMLPVPVDMGAGI---------------PRRDASVGQPM--PITA 498
G+ P P AG P + +P P+TA
Sbjct: 519 SVPMPRANGPAPNGGAARPAPQGAPAGSRAPPPGAPAPGRAPQPAYNKPQARPQGAPVTA 578
Query: 499 LSTA--------------LANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQT 544
A LA ASP +Q+ +LGE +Y + + + A K+TGMLLEMD
Sbjct: 579 QPAAAPQQSSLPNLTADQLAAASPMEQKQMLGEVIYMRIVPSQPELAGKITGMLLEMDNN 638
Query: 545 EVLHLLESPEALKAKVAEAMEVLR 568
E+L LL+S EA+ AKV EA VL+
Sbjct: 639 ELLALLDSEEAMNAKVQEANTVLQ 662
>gi|403169797|ref|XP_003889581.1| hypothetical protein, variant [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375168424|gb|EHS63645.1| hypothetical protein, variant [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 715
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 289/630 (45%), Positives = 390/630 (61%), Gaps = 86/630 (13%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
TSLYVG+LD VT++ LY++FS +G V S+RVCRD TRRSLGY YVNY N ADA RAL+
Sbjct: 84 TSLYVGELDPTVTEAMLYEIFSMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADAERALE 143
Query: 90 VLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKI 149
LN++ + NK+ RIM+S RDPS+RK+G GNIFIKNLD++ID+KALHDTF++FG+ILSCK+
Sbjct: 144 QLNYSLIKNKACRIMWSQRDPSLRKTGQGNIFIKNLDETIDNKALHDTFAAFGDILSCKV 203
Query: 150 ATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTK 207
ATD G SKG+GFV + ESA+ AI +NGM +NDK VFVG + +++R+ ++++
Sbjct: 204 ATDEHGASKGYGFVHYVTGESAEAAIKGVNGMQLNDKVVFVGIHVPRRDRQAKIDEVRSQ 263
Query: 208 FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVE 267
F N+++KNL TT E+L ++FG++G ITSA V D GK + FGFVN+EN + A+KAV+
Sbjct: 264 FTNLYIKNLPTETTTEELNEVFGKFGPITSAAVQSDEHGKHRGFGFVNYENHESASKAVD 323
Query: 268 ALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEK 327
AL+ K + YV +AQK++ER+ ELK EQ ET K+QG+NLY+KNL D DDEK
Sbjct: 324 ALHDKDYKGNVLYVARAQKRTERDAELKKAHEQQKYETTLKYQGVNLYVKNLDDEYDDEK 383
Query: 328 LKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 387
L+ F+ FGTITSCKVM+D G SKG GFV FS+P+EA++A+AEMNGKM+ SKPLYV++A
Sbjct: 384 LQNEFTPFGTITSCKVMKDEKGTSKGFGFVCFSSPDEATKAVAEMNGKMLGSKPLYVSLA 443
Query: 388 QRKEERRARLQAQFSQ---MR------------PVAMGP---------SVPP---RMPMY 420
QRKE R+ +L+AQ SQ MR P P + PP R MY
Sbjct: 444 QRKEVRKQQLEAQMSQRSQMRSQQIAAAGIPGAPYGAPPNPMYFGGAAAYPPHGGRGMMY 503
Query: 421 PPG--PSGLGQQFLYGQAPPAIIPPQMPPRGHAYR-YP-------------LGRNMQDFP 464
PP P+G+ + Y APP + P P G Y +P M+ P
Sbjct: 504 PPNGMPAGMPPRPRY--APPGQMAPMGMPGGAPYPPHPQDYPGYPVGGPVPPVGGMRGIP 561
Query: 465 -------------FDMGAGSMLP-------VPVDMGAGIPR------RDA---------- 488
F G G+ +P P G G R RD
Sbjct: 562 GPPAHLGGPNPPNFRGGNGAPIPPMNGRGSAPSTNGPGSMRGAPPQSRDGYAPSSLSGRA 621
Query: 489 ---SVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTE 545
V P+ ALA ASP +Q+ +LGE+LYP + + + + A K+TGM+LE++ E
Sbjct: 622 VSHRVSDIAPVGLSPAALAKASPAEQKQMLGEALYPQIAEKQPEKAGKITGMILEIENAE 681
Query: 546 VLHLLESPEALKAKVAEAMEVLRSVAQQQA 575
++HLLE+ AL AKV EA++VL ++ A
Sbjct: 682 LIHLLENRPALDAKVQEAVQVLDEYERKDA 711
>gi|319411853|emb|CBQ73896.1| probable PAB1-mRNA polyadenylate-binding protein [Sporisorium
reilianum SRZ2]
Length = 650
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 278/595 (46%), Positives = 392/595 (65%), Gaps = 58/595 (9%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
TSLYVG+LD +VT++ L+++F+ +G V S+RVCRD TRRSLGY YVN+ N AD RA++
Sbjct: 47 TSLYVGELDPSVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNFLNAADGERAME 106
Query: 90 VLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKI 149
LN++ + N+ RIM+S RDP++R++G GNIFIKNLD ID+KALHDTF++FGNILSCK+
Sbjct: 107 QLNYSLIRNRPCRIMWSQRDPALRRTGQGNIFIKNLDAGIDNKALHDTFAAFGNILSCKV 166
Query: 150 ATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK-- 207
AT+ +G S G+GFV +E E+A+ AI +NGML+NDK+V+VGH + ++ER+ +++
Sbjct: 167 ATNDTG-SLGYGFVHYETAEAAEAAIKHVNGMLLNDKKVYVGHHIPRKERQAKIEESRAN 225
Query: 208 FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVE 267
F NV+ KN+D TDE+ +K+F YG ITS V+ RD DGKSK FGFVNFE+ ++A AV+
Sbjct: 226 FTNVYAKNVDPDVTDEEFEKLFTRYGKITSCVLQRDDDGKSKGFGFVNFEDHNEAQTAVD 285
Query: 268 ALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEK 327
L+ F ++ +V +AQKKSERE+EL+ +E A E + KFQG+NLY+KN+ +S DDE+
Sbjct: 286 ELHDSDFKGQKLFVARAQKKSEREEELRRSYEAAKNEKLAKFQGVNLYLKNIPESYDDER 345
Query: 328 LKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 387
L+E F+ FG ITSCK+MR PSG+S+G GFV +S PEEA++A++EMNGKM+ ++PLYVA+A
Sbjct: 346 LREEFAPFGAITSCKIMRAPSGVSRGFGFVCYSVPEEANKAVSEMNGKMLDNRPLYVALA 405
Query: 388 QRKEERRARLQAQF-------SQMRPVAMGPSVP------PRMPMYPPGPSGLGQQFLYG 434
QRK++RR +L+AQ Q + A G P P+ +P P G+ + Y
Sbjct: 406 QRKDDRRQQLEAQIMQRNQLRLQQQAAAQGMGYPGPGMYYPQPGAFPGQPGGMMPRPRY- 464
Query: 435 QAPPAIIPPQMP--PRGHAYRYPLGRNMQDF----------------------------- 463
AP ++P MP P G ++P G Q +
Sbjct: 465 -APAGMMPQGMPMAPYGQPGQFPAGMMPQGYRPARPPRGAPNAAGGPAPPAGARPPAGVN 523
Query: 464 --PFDMG---AGSMLPV-PVDMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGE 517
P G G +P P AG P+ +A+ GQP + ALA ASPE+Q+ +LGE
Sbjct: 524 GAPRPAGQPVPGQPMPRGPAARPAGRPQGEAA-GQPG--ALTAAALAKASPEEQKQMLGE 580
Query: 518 SLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQ 572
++YP V + + A K+TGM+LE+ TE+LHLL+ EAL AKV EA+EVL+ Q
Sbjct: 581 AIYPKVAASQPELAGKLTGMILELPVTELLHLLDESEALDAKVNEALEVLKEYQQ 635
>gi|403169799|ref|XP_003329214.2| hypothetical protein PGTG_10266 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375168425|gb|EFP84795.2| hypothetical protein PGTG_10266 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 804
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 289/630 (45%), Positives = 390/630 (61%), Gaps = 86/630 (13%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
TSLYVG+LD VT++ LY++FS +G V S+RVCRD TRRSLGY YVNY N ADA RAL+
Sbjct: 173 TSLYVGELDPTVTEAMLYEIFSMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADAERALE 232
Query: 90 VLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKI 149
LN++ + NK+ RIM+S RDPS+RK+G GNIFIKNLD++ID+KALHDTF++FG+ILSCK+
Sbjct: 233 QLNYSLIKNKACRIMWSQRDPSLRKTGQGNIFIKNLDETIDNKALHDTFAAFGDILSCKV 292
Query: 150 ATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTK 207
ATD G SKG+GFV + ESA+ AI +NGM +NDK VFVG + +++R+ ++++
Sbjct: 293 ATDEHGASKGYGFVHYVTGESAEAAIKGVNGMQLNDKVVFVGIHVPRRDRQAKIDEVRSQ 352
Query: 208 FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVE 267
F N+++KNL TT E+L ++FG++G ITSA V D GK + FGFVN+EN + A+KAV+
Sbjct: 353 FTNLYIKNLPTETTTEELNEVFGKFGPITSAAVQSDEHGKHRGFGFVNYENHESASKAVD 412
Query: 268 ALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEK 327
AL+ K + YV +AQK++ER+ ELK EQ ET K+QG+NLY+KNL D DDEK
Sbjct: 413 ALHDKDYKGNVLYVARAQKRTERDAELKKAHEQQKYETTLKYQGVNLYVKNLDDEYDDEK 472
Query: 328 LKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 387
L+ F+ FGTITSCKVM+D G SKG GFV FS+P+EA++A+AEMNGKM+ SKPLYV++A
Sbjct: 473 LQNEFTPFGTITSCKVMKDEKGTSKGFGFVCFSSPDEATKAVAEMNGKMLGSKPLYVSLA 532
Query: 388 QRKEERRARLQAQFSQ---MR------------PVAMGP---------SVPP---RMPMY 420
QRKE R+ +L+AQ SQ MR P P + PP R MY
Sbjct: 533 QRKEVRKQQLEAQMSQRSQMRSQQIAAAGIPGAPYGAPPNPMYFGGAAAYPPHGGRGMMY 592
Query: 421 PPG--PSGLGQQFLYGQAPPAIIPPQMPPRGHAYR-YP-------------LGRNMQDFP 464
PP P+G+ + Y APP + P P G Y +P M+ P
Sbjct: 593 PPNGMPAGMPPRPRY--APPGQMAPMGMPGGAPYPPHPQDYPGYPVGGPVPPVGGMRGIP 650
Query: 465 -------------FDMGAGSMLP-------VPVDMGAGIPR------RDA---------- 488
F G G+ +P P G G R RD
Sbjct: 651 GPPAHLGGPNPPNFRGGNGAPIPPMNGRGSAPSTNGPGSMRGAPPQSRDGYAPSSLSGRA 710
Query: 489 ---SVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTE 545
V P+ ALA ASP +Q+ +LGE+LYP + + + + A K+TGM+LE++ E
Sbjct: 711 VSHRVSDIAPVGLSPAALAKASPAEQKQMLGEALYPQIAEKQPEKAGKITGMILEIENAE 770
Query: 546 VLHLLESPEALKAKVAEAMEVLRSVAQQQA 575
++HLLE+ AL AKV EA++VL ++ A
Sbjct: 771 LIHLLENRPALDAKVQEAVQVLDEYERKDA 800
>gi|403290728|ref|XP_003936459.1| PREDICTED: polyadenylate-binding protein 1-like [Saimiri
boliviensis boliviensis]
Length = 614
Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust.
Identities = 282/613 (46%), Positives = 381/613 (62%), Gaps = 62/613 (10%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
ASG+ + SLYVGDL +VT++ LY+ FS G +LS+RVCRD++TRRSLGY Y+N+ P
Sbjct: 3 ASGSGYPLASLYVGDLHPDVTEAMLYEKFSPAGSILSIRVCRDVATRRSLGYAYINFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF L + IRIM+S RDP +RKSG GNIFIKNL+ SID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER-- 199
GNILSCK+ D G S+GFGFV FE E+AQ AI+ +NGML+ND++VFVGHF ++ER
Sbjct: 123 GNILSCKVVCDEHG-SRGFGFVHFETYEAAQQAINTMNGMLLNDRKVFVGHFKSRRERAA 181
Query: 200 ETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
E A +F N++VKNL ++ L+ +F ++G + S VMRD G+S+CFGFVNFE
Sbjct: 182 ELGARALEFTNIYVKNLPADVDEQGLQDLFSQFGKMLSVKVMRDSSGRSRCFGFVNFEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
++A KAV +NGK+ R Y +AQK+ ER+ ELK +FEQ ++ + ++QG+NLY+KNL
Sbjct: 242 EEAQKAVVHMNGKEVSGRLLYASRAQKRVERQNELKRRFEQMKQDRLSRYQGVNLYVKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
DSIDD KL++ FS +G ITS KVM + S SKG GFV FS+PEEA++A+ EMNG+++ +
Sbjct: 302 DDSIDDGKLRKEFSPYGVITSAKVMTEGSH-SKGFGFVCFSSPEEATKAVTEMNGRIVGT 360
Query: 380 KPLYVAVAQRKEERRARLQAQFSQ----MRPVA---MGPSVPPRMPMYPPGPSGLGQQFL 432
KPLYVA+AQRKEER+A L Q+ Q MR ++ +G P P P Q
Sbjct: 361 KPLYVALAQRKEERKAILTNQYMQRVSTMRTLSNPLLGSFQQPSSYFLPAVPQPPAQAAY 420
Query: 433 YGQAP-----PA---------------IIPPQMP--PRGH--AYRYPLGRNMQDFPFDM- 467
YG P PA + PP MP P H R + + P
Sbjct: 421 YGCGPVTPTQPAPRWTSQPPRPSCASMVRPPVMPRCPPAHIGGIRQASTQVPRTVPHTQR 480
Query: 468 --GAGSMLPVPVDMGAGIPRR------------------DASVGQP--MPITALSTALAN 505
G+ P +G P R + +V P P+TA + LA
Sbjct: 481 VANIGTQTTGPSGVGCCTPGRPLLPYKCSSAAHSTDQVQEPAVHIPGHEPLTA--SMLAA 538
Query: 506 ASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAME 565
A +Q+ ++GE LYPL+ + A K+TGMLLE+D +E+L +LESPE+L AK+ EA+
Sbjct: 539 APLHEQKQMIGERLYPLIHDVHTQLAGKITGMLLEIDNSELLLMLESPESLHAKIDEAVA 598
Query: 566 VLRSVAQQQANNP 578
VL+ A Q P
Sbjct: 599 VLQ--AHQAVEQP 609
>gi|307103841|gb|EFN52098.1| hypothetical protein CHLNCDRAFT_59028 [Chlorella variabilis]
Length = 634
Score = 500 bits (1287), Expect = e-138, Method: Compositional matrix adjust.
Identities = 236/397 (59%), Positives = 312/397 (78%), Gaps = 4/397 (1%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNY---ANPADAAR 86
+SLYVGDLD +VT++QL+++FSQ+G V S+RVCRD TRRSLGY YVNY +PA A R
Sbjct: 38 SSLYVGDLDRDVTEAQLFEVFSQIGPVASIRVCRDAVTRRSLGYAYVNYNSVLDPAAAER 97
Query: 87 ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
ALD LN+TPL + +RIM+SHRDP+ RKSG GNIFIKNLD+S+D+KALHDTFS+FGNILS
Sbjct: 98 ALDQLNYTPLVGRPMRIMWSHRDPAFRKSGVGNIFIKNLDRSVDNKALHDTFSAFGNILS 157
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKT 206
CK+A D G+SKG+GFV FE ESA+ AI+K+NGML+ K+V+VG FLR+ ER + + +
Sbjct: 158 CKVAQDLKGESKGYGFVHFEKDESARLAIEKVNGMLLEGKKVYVGPFLRRSERSSDS-EV 216
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
KF NVFVKNLDE+ +D+++K +F E+GT+ S ++MRD +GKSK FGF+NFE + AA AV
Sbjct: 217 KFTNVFVKNLDEAVSDDEVKAMFAEHGTVNSCIIMRDDEGKSKGFGFINFEEPEQAASAV 276
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
+ALNGK + +E YVG+AQKK+ERE L+ +FE+ E + K+QG+NLY+KNL D IDDE
Sbjct: 277 QALNGKDVNCKELYVGRAQKKAEREAMLRAKFEELRSERIAKYQGMNLYVKNLHDDIDDE 336
Query: 327 KLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 386
L+ FS+FGTITS KVM D +G S+G GFV +++PEEA+RA+ EMNG+MI KP+YVA+
Sbjct: 337 TLRTEFSQFGTITSAKVMVDSAGKSRGFGFVCYASPEEATRAVTEMNGRMIKGKPIYVAL 396
Query: 387 AQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPG 423
AQR++ RRA+L+ Q+ Q + GP P M+PPG
Sbjct: 397 AQRRDVRRAQLEQQYQQRVAMPPGPRGPMAPGMFPPG 433
>gi|224078006|ref|XP_002190593.1| PREDICTED: embryonic polyadenylate-binding protein-like
[Taeniopygia guttata]
Length = 629
Score = 499 bits (1286), Expect = e-138, Method: Compositional matrix adjust.
Identities = 285/632 (45%), Positives = 391/632 (61%), Gaps = 90/632 (14%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
ASG + SLYVGDL +VT++ LY+ FS G ++S+RVCRD++TRRSLGY Y+N+ P
Sbjct: 3 ASGPGYPLASLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDVATRRSLGYAYINFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + + IRIM+S RDP +RKSG GN+FIKNLD SID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFEVIKGRPIRIMWSQRDPGLRKSGVGNVFIKNLDDSIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G S+G+GFV FE E+A AI+ +NGML+ND++VFVGHF ++ERE
Sbjct: 123 GNILSCKVVCDENG-SRGYGFVHFETHEAATRAIETMNGMLLNDRKVFVGHFKSRKEREA 181
Query: 202 V--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
A +F NV++KN + D+ L++IF +G S VM D +G+SK FGFVNFE
Sbjct: 182 EVGARAIEFTNVYIKNFGDDMDDDRLREIFSRFGKTLSVKVMMDNNGRSKGFGFVNFEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
++A KAV +NGK+ + R YVG+AQK+ ER+ ELK +FEQ +E V+++QG+NLY+KNL
Sbjct: 242 EEAQKAVADMNGKEINGRLLYVGRAQKRLERQSELKRKFEQMKQERVNRYQGVNLYVKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D IDDE+L++ FS +GTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +
Sbjct: 302 DDGIDDERLRKEFSPYGTITSAKVMTE-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVST 360
Query: 380 KPLYVAVAQRKEERRARLQAQFSQ----MRPVA---MGPSVPPRMPMYPPGPSGLGQQFL 432
KPLYVA+AQRKEER+A L Q+ Q MR + +G P PP P +
Sbjct: 361 KPLYVALAQRKEERKAILTNQYMQRLATMRALPGPLLGSFQTPSGYFLPPMPQPQTRAAF 420
Query: 433 YGQAP----------------PAIIP-----------------------------PQMPP 447
YG +P P + P P++PP
Sbjct: 421 YGPSPVVPVRPATRWSAQPSRPPLYPEATPILRAAVPPRRLLSNISTTRQASTQVPRVPP 480
Query: 448 RGH----------AYRYP----LGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQP 493
+ + R P L R Q + + A +M P MG P VG+P
Sbjct: 481 QAQRLVNIGTQTVSTRLPSSSALPRGTQQYKYSSSARNMQP----MGHMPP-----VGEP 531
Query: 494 M-------PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEV 546
P+TA + LA A P++Q+ ++GE LYPL+ L A K+TGMLLE+D +E+
Sbjct: 532 AVHVQGQEPLTA--SLLAAAPPQEQKQMIGERLYPLIHVLHPSLAGKITGMLLEIDNSEL 589
Query: 547 LHLLESPEALKAKVAEAMEVLRSVAQQQANNP 578
L LLESP++L++K+ EA+ VL+ A Q P
Sbjct: 590 LLLLESPDSLRSKIEEAVTVLQ--AHQSTETP 619
>gi|303322729|ref|XP_003071356.1| Poly-binding protein FabM, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240111058|gb|EER29211.1| Poly-binding protein FabM, putative [Coccidioides posadasii C735
delta SOWgp]
Length = 768
Score = 499 bits (1286), Expect = e-138, Method: Compositional matrix adjust.
Identities = 298/681 (43%), Positives = 388/681 (56%), Gaps = 144/681 (21%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVG+LD +VT++ L++LFS +GQV S+RVCRD TRRSLGY YVNY N AD RAL
Sbjct: 54 SASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERAL 113
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LN+T + + RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++FGNILSCK
Sbjct: 114 EDLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILSCK 173
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKT 206
+A D G SKG+GFV +E E+AQNAI +NGML+NDK+VFVGH + K++R++ +K
Sbjct: 174 VAQDEFGNSKGYGFVHYETAEAAQNAIKHVNGMLLNDKKVFVGHHIAKKDRQSKFEEMKA 233
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGD-GKSKCFGFVNFENADDAAKA 265
F NV+VKN+D+ TT+E+ + +F ++G ITSA + RD + GKS+ FGFVNF + D+AA A
Sbjct: 234 NFTNVYVKNIDQDTTEEEFRDLFEKFGEITSATLARDAESGKSRGFGFVNFTSHDNAAAA 293
Query: 266 VEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDD 325
VEALN K F ++ YVG+AQKK ERE+EL+ Q+E A E K+QG+NLYIKNL D IDD
Sbjct: 294 VEALNDKDFKGQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQGVNLYIKNLSDDIDD 353
Query: 326 EKLKELFSEFGTITSCKVMRD--------------------------------------- 346
EKL+ELFS +GTITS KVMRD
Sbjct: 354 EKLRELFSSYGTITSAKVMRDFAPESTSDSEKEAKKDSKEPETKEEEPKDEAGDNAENKD 413
Query: 347 --------------PSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEE 392
P G SKG GFV FS+P+EAS+A+ EMN +M+ KPLYVA+AQRK+
Sbjct: 414 NKENKAESKKSEKKPLGKSKGFGFVCFSSPDEASKAVTEMNQRMVHGKPLYVALAQRKDV 473
Query: 393 RRARLQAQFSQ-------------------MRP-VAMGPS-------------------V 413
RR++L+A M+P V GP V
Sbjct: 474 RRSQLEASIQARNTIRQQQAAAAAGMPQPFMQPAVFYGPGQQNFIPNQRGGMPFQQPGMV 533
Query: 414 PPRMP-----------------------MYPPGPSGLGQQFLYGQAPPAIIP-----PQM 445
P MP PP G+G Q L A IP PQM
Sbjct: 534 IPGMPGGRHGQFGGFPGQQGGRGMNPNQQIPPNAYGIGAQGLPMGMQGAGIPNGLNYPQM 593
Query: 446 ----PPRGHAY-RYPLGRNMQDFPFDMGAGSML--PVPVDMGAGIPRRDASVGQPMPITA 498
P G + P G+ M MG G +PV G G P + A GQ P A
Sbjct: 594 GQVQAPFGRGRGQAPSGQGMPPNVQGMGPGGQYGRGMPVQQGMGRPGQ-AGRGQGAPAQA 652
Query: 499 LSTALANASPE-------------QQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTE 545
+ NASP QQ+ +LGE++YP ++ + + A K+TGMLLEMD E
Sbjct: 653 VGQRDENASPSGLTLQVLNAAPPAQQKQMLGEAIYPKIQAQQPELAGKITGMLLEMDNAE 712
Query: 546 VLHLLESPEALKAKVAEAMEV 566
+L L++ ALKAKV EA+ V
Sbjct: 713 LLALVDDDAALKAKVDEALTV 733
>gi|320032897|gb|EFW14847.1| polyadenylate-binding protein [Coccidioides posadasii str.
Silveira]
Length = 768
Score = 499 bits (1286), Expect = e-138, Method: Compositional matrix adjust.
Identities = 298/681 (43%), Positives = 388/681 (56%), Gaps = 144/681 (21%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVG+LD +VT++ L++LFS +GQV S+RVCRD TRRSLGY YVNY N AD RAL
Sbjct: 54 SASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERAL 113
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LN+T + + RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++FGNILSCK
Sbjct: 114 EDLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILSCK 173
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKT 206
+A D G SKG+GFV +E E+AQNAI +NGML+NDK+VFVGH + K++R++ +K
Sbjct: 174 VAQDEFGNSKGYGFVHYETAEAAQNAIKHVNGMLLNDKKVFVGHHIAKKDRQSKFEEMKA 233
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGD-GKSKCFGFVNFENADDAAKA 265
F NV+VKN+D+ TT+E+ + +F ++G ITSA + RD + GKS+ FGFVNF + D+AA A
Sbjct: 234 NFTNVYVKNIDQDTTEEEFRDLFEKFGEITSATLARDAESGKSRGFGFVNFTSHDNAAAA 293
Query: 266 VEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDD 325
VEALN K F ++ YVG+AQKK ERE+EL+ Q+E A E K+QG+NLYIKNL D IDD
Sbjct: 294 VEALNDKDFKGQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQGVNLYIKNLSDDIDD 353
Query: 326 EKLKELFSEFGTITSCKVMRD--------------------------------------- 346
EKL+ELFS +GTITS KVMRD
Sbjct: 354 EKLRELFSSYGTITSAKVMRDFAPESTSDSEKEAKKDSKEPETKEEEPKDEAGDNAENKD 413
Query: 347 --------------PSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEE 392
P G SKG GFV FS+P+EAS+A+ EMN +M+ KPLYVA+AQRK+
Sbjct: 414 NKENKAESKKSEKKPLGKSKGFGFVCFSSPDEASKAVTEMNQRMVHGKPLYVALAQRKDV 473
Query: 393 RRARLQAQFSQ-------------------MRP-VAMGPS-------------------V 413
RR++L+A M+P V GP V
Sbjct: 474 RRSQLEASIQARNTIRQQQAAAAAGMPQPFMQPAVFYGPGQQNFIPNQRGGMPFQQPGMV 533
Query: 414 PPRMP-----------------------MYPPGPSGLGQQFLYGQAPPAIIP-----PQM 445
P MP PP G+G Q L A IP PQM
Sbjct: 534 IPGMPGGRHGQFGGFPGQQGGRGMNPNQQIPPNAYGIGAQGLPMGMQGAGIPNGLNYPQM 593
Query: 446 ----PPRGHAY-RYPLGRNMQDFPFDMGAGSML--PVPVDMGAGIPRRDASVGQPMPITA 498
P G + P G+ M MG G +PV G G P + A GQ P A
Sbjct: 594 GQVQAPFGRGRGQAPSGQGMPPNVQGMGPGGQYGRGMPVQQGMGRPGQ-AGRGQGAPAQA 652
Query: 499 LSTALANASPE-------------QQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTE 545
+ NASP QQ+ +LGE++YP ++ + + A K+TGMLLEMD E
Sbjct: 653 VGQRDENASPSGLTLQVLNAAPPAQQKQMLGEAIYPKIQAQQPELAGKITGMLLEMDNAE 712
Query: 546 VLHLLESPEALKAKVAEAMEV 566
+L L++ ALKAKV EA+ V
Sbjct: 713 LLALVDDDAALKAKVDEALTV 733
>gi|119189891|ref|XP_001245552.1| hypothetical protein CIMG_04993 [Coccidioides immitis RS]
gi|121937111|sp|Q1DXH0.1|PABP_COCIM RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|392868454|gb|EAS34245.2| polyadenylate-binding protein, cytoplasmic and nuclear
[Coccidioides immitis RS]
Length = 768
Score = 499 bits (1285), Expect = e-138, Method: Compositional matrix adjust.
Identities = 298/681 (43%), Positives = 388/681 (56%), Gaps = 144/681 (21%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVG+LD +VT++ L++LFS +GQV S+RVCRD TRRSLGY YVNY N AD RAL
Sbjct: 54 SASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERAL 113
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LN+T + + RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++FGNILSCK
Sbjct: 114 EDLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILSCK 173
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKT 206
+A D G SKG+GFV +E E+AQNAI +NGML+NDK+VFVGH + K++R++ +K
Sbjct: 174 VAQDEFGNSKGYGFVHYETAEAAQNAIKHVNGMLLNDKKVFVGHHIAKKDRQSKFEEMKA 233
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGD-GKSKCFGFVNFENADDAAKA 265
F NV+VKN+D+ TT+E+ + +F ++G ITSA + RD + GKS+ FGFVNF + D+AA A
Sbjct: 234 NFTNVYVKNIDQDTTEEEFRDLFEKFGEITSATLARDAESGKSRGFGFVNFTSHDNAAAA 293
Query: 266 VEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDD 325
VEALN K F ++ YVG+AQKK ERE+EL+ Q+E A E K+QG+NLYIKNL D IDD
Sbjct: 294 VEALNDKDFKGQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQGVNLYIKNLSDDIDD 353
Query: 326 EKLKELFSEFGTITSCKVMRD--------------------------------------- 346
EKL+ELFS +GTITS KVMRD
Sbjct: 354 EKLRELFSSYGTITSAKVMRDFAPESTSDSEKEAKKDSKEPETKEEEPKDEAGDNAENKD 413
Query: 347 --------------PSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEE 392
P G SKG GFV FS+P+EAS+A+ EMN +M+ KPLYVA+AQRK+
Sbjct: 414 NKENKAESKKSEKKPLGKSKGFGFVCFSSPDEASKAVTEMNQRMVHGKPLYVALAQRKDV 473
Query: 393 RRARLQAQFSQ-------------------MRP-VAMGPS-------------------V 413
RR++L+A M+P V GP V
Sbjct: 474 RRSQLEASIQARNTIRQQQAAAAAGMPQPFMQPAVFYGPGQQNFIPNQRGGMPFQQPGMV 533
Query: 414 PPRMP-----------------------MYPPGPSGLGQQFLYGQAPPAIIP-----PQM 445
P MP PP G+G Q L A IP PQM
Sbjct: 534 IPGMPGGRHGQFGGFPGQQGGRGMNPNQQIPPNAYGIGAQGLPMGMQGAGIPNGLNYPQM 593
Query: 446 ----PPRGHAY-RYPLGRNMQDFPFDMGAGSML--PVPVDMGAGIPRRDASVGQPMPITA 498
P G + P G+ M MG G +PV G G P + A GQ P A
Sbjct: 594 GQVQAPFGRGRGQAPSGQGMPPNVQGMGPGGQYGRGMPVQQGMGRPGQ-AGRGQGAPAQA 652
Query: 499 LSTALANASPE-------------QQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTE 545
+ NASP QQ+ +LGE++YP ++ + + A K+TGMLLEMD E
Sbjct: 653 VGQRDENASPNGLTLQVLNAAPPAQQKQMLGEAIYPKIQAQQPELAGKITGMLLEMDNAE 712
Query: 546 VLHLLESPEALKAKVAEAMEV 566
+L L++ ALKAKV EA+ V
Sbjct: 713 LLALVDDDAALKAKVDEALTV 733
>gi|148227710|ref|NP_001085351.1| embryonic polyadenylate-binding protein B [Xenopus laevis]
gi|82236619|sp|Q6GR16.1|EPABB_XENLA RecName: Full=Embryonic polyadenylate-binding protein B;
Short=Embryonic poly(A)-binding protein B; Short=ePAB-B;
Short=ePABP-B; AltName: Full=XePABP-B
gi|49257242|gb|AAH71118.1| MGC81363 protein [Xenopus laevis]
Length = 629
Score = 499 bits (1285), Expect = e-138, Method: Compositional matrix adjust.
Identities = 282/634 (44%), Positives = 389/634 (61%), Gaps = 76/634 (11%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+ ++ SLY+GDL +VT++ LY+ FS G ++S+RVCRD++TRRSLGY Y+N+ P
Sbjct: 3 ATRAEYPLASLYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + + IRIM+S RDP +RKSG GN+FIKNLD SID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFEVIKGRPIRIMWSQRDPGLRKSGVGNVFIKNLDDSIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
G+ILSCK+ D G S+G+GFV FE +E+A AI +NGML+ND++VFVGHF ++ERE
Sbjct: 123 GDILSCKVVCDEYG-SRGYGFVHFETQEAANRAIQTMNGMLLNDRKVFVGHFKSRREREL 181
Query: 202 V--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
A +F NV++KN E D+ LK+IF +G S VM D G+S+ FGFVN+ N
Sbjct: 182 EYGAKVMEFTNVYIKNFGEDMDDKRLKEIFSAFGNTLSVKVMMDNSGRSRGFGFVNYGNH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
++A KAV +NGK+ + R YVG+AQK+ ER+ ELK +FEQ +E ++++QG+NLY+KNL
Sbjct: 242 EEAQKAVTEMNGKEVNGRMVYVGRAQKRIERQGELKRKFEQIKQERINRYQGVNLYVKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D IDD++L++ FS +GTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +
Sbjct: 302 DDGIDDDRLRKEFSPYGTITSTKVMTE-GGHSKGFGFVCFSSPEEATKAVTEMNGRIVST 360
Query: 380 KPLYVAVAQRKEERRARLQAQFSQ----MRPVAMGPSVP----------PRMP------M 419
KPLYVA+AQRKEER+A L Q+ Q MR + GP + P MP
Sbjct: 361 KPLYVALAQRKEERKAILTNQYMQRLATMRAMP-GPLLGSFQQPANYFLPTMPQPSNRAF 419
Query: 420 YPPGPSG----LGQQFLYGQAPPAIIPP-----QMPPR-------------GHAYRYPLG 457
Y P P Q + PP PP +PPR R PL
Sbjct: 420 YSPNPVAPVRPAPQWASHQSRPPQYQPPAPLMRAVPPRRMHSNISTMKQASTQVPRVPLQ 479
Query: 458 RNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVG----QPM------------------- 494
AG+ V + +P S G QP+
Sbjct: 480 SQRVANIGTQTAGARAQVNASIMRAMPHYKYSCGVRNVQPIGSSAHLQQVLEPAVLMQGQ 539
Query: 495 -PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESP 553
P+TA + LA A ++Q+ +LGE +YPL+ ++ A K+TGMLLE+D +E+LH+LESP
Sbjct: 540 EPLTA--SLLAAAPLQEQKQILGERIYPLIHEMHPTLAGKITGMLLEIDNSELLHMLESP 597
Query: 554 EALKAKVAEAMEVLRSVAQQQANNPADQLASLSL 587
E+L +KV EA+ VL++ QA A + A SL
Sbjct: 598 ESLHSKVEEAVAVLQA---HQAKESAPKSAPQSL 628
>gi|302565150|ref|NP_001181379.1| polyadenylate-binding protein 1-like [Macaca mulatta]
Length = 614
Score = 499 bits (1285), Expect = e-138, Method: Compositional matrix adjust.
Identities = 282/617 (45%), Positives = 380/617 (61%), Gaps = 70/617 (11%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
ASG+ + SLYVGDL +VT++ LY+ FS G +LS+RVCRD++TRRSLGY Y+N+ P
Sbjct: 3 ASGSGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF L + IRIM+S RDP +RKSG GNIFIKNL+ SID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D G S+GFGFV FE E+AQ AI+ +NGML+ND++VFVGHF ++ERE
Sbjct: 123 GNILSCKVVCDEHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRREREA 181
Query: 202 V--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
A +F N++VKNL ++ L+ +F ++G + S VMRD G S+CFGFVNFE
Sbjct: 182 ELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
++A KAV +NGK+ R Y G+AQK+ ER+ ELK +FEQ ++ + ++QG+NLY+KNL
Sbjct: 242 EEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
DSIDD+KL++ FS +G ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +
Sbjct: 302 DDSIDDDKLRKEFSPYGVITSAKVMTE-GGHSKGFGFVCFSSPEEATKAVTEMNGRIVGT 360
Query: 380 KPLYVAVAQRKEERRARLQAQFSQ----MRPVA--------------------------- 408
KPLYVA+AQRKEER+A L Q+ Q MR ++
Sbjct: 361 KPLYVALAQRKEERKAILTNQYMQRLSTMRTLSNPLLGSFQQPSSYFLPAVPQPPAQAAY 420
Query: 409 --MGPSVP----PRMPMYPPGPSGLGQQFLYG-------------QAPPAIIPPQMPPRG 449
GP P PR PP PS QA + P+M P
Sbjct: 421 YGCGPVTPTQPAPRWTSQPPRPSCASMVRPPVMPRRPPAHISSVRQASTQV--PRMVP-- 476
Query: 450 HAYRYPLGRNMQDFPFDMGAGS----MLPVPVDMGAGIPRR--DASVGQP--MPITALST 501
H R P +G + +LP A R + +V P P+TA +
Sbjct: 477 HTQRVANIGTQTTGPGGVGCCTPGRPLLPYKCSSAAHSTYRVQEPAVHIPGQEPLTA--S 534
Query: 502 ALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVA 561
LA A +Q+ ++GE LYPL+ + A K+TGMLLE+D +E+L +LESPE+L AK+
Sbjct: 535 MLAAAPLHEQKQMIGERLYPLIHDVHTQLAGKITGMLLEIDNSELLLMLESPESLHAKID 594
Query: 562 EAMEVLRSVAQQQANNP 578
EA+ VL+ A Q P
Sbjct: 595 EAVAVLQ--AHQAVEQP 609
>gi|328871935|gb|EGG20305.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 567
Score = 499 bits (1285), Expect = e-138, Method: Compositional matrix adjust.
Identities = 286/583 (49%), Positives = 371/583 (63%), Gaps = 57/583 (9%)
Query: 27 FLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAAR 86
F ++SLYVGDL +VTDSQL+++F+QVG V ++R+CRD +TRRSL Y YVNY NPADA R
Sbjct: 5 FSSSSLYVGDLHQDVTDSQLFEIFNQVGPVANLRICRDTTTRRSLNYAYVNYHNPADAER 64
Query: 87 ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
ALD LN T + K+ RIM+S RDPS+RKSG GNIFIKNLDKS+DHKAL DTFS+FGNILS
Sbjct: 65 ALDTLNNTLVKGKACRIMWSQRDPSLRKSGVGNIFIKNLDKSVDHKALFDTFSAFGNILS 124
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKT 206
CK+ TD + SKGFGFV +E+++SA AI K+NGM+IND++VFVG F +ER +
Sbjct: 125 CKVVTDETNVSKGFGFVHYESQDSADKAIMKVNGMIINDQKVFVGPFKSSKERGQTQ-EL 183
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
K+ NV+VKNL E +E+L+ + YG IT+ +M D KSK FGF NFE D+A V
Sbjct: 184 KYTNVYVKNLSEDVNEEELRDLLVPYGKITNLTIMSDEKSKSKGFGFANFETPDEAKNCV 243
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
EA NGK F + YVG+AQKK ERE ELK +FE K+QG+NLYIKN+ DSID +
Sbjct: 244 EAENGKLFHGKVIYVGRAQKKMEREAELKHKFE-------TKYQGVNLYIKNIDDSIDSD 296
Query: 327 KLKELFSEFGTITSCKVMR-DPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVA 385
KL+ F+ +GTITS KVMR D S SKG GFV ++TP+EAS+A+AEM+G+M+ +KPLYVA
Sbjct: 297 KLRSTFAAYGTITSAKVMRDDKSTSSKGFGFVCYTTPDEASKAVAEMHGRMVGNKPLYVA 356
Query: 386 VAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPPQM 445
AQRKE RR L+AQ ++ + G + P MY GP Y Q P + P M
Sbjct: 357 FAQRKEIRRQHLEAQHNKFK----GNRIQPVPSMYAGGP------MFYNQGMPVVYPQMM 406
Query: 446 P----------PRGHAY----RYPLGRNMQ------DFPFDM-GAGSMLPV-PVDMGAGI 483
P P+G Y YP+ RN + + P GA + P P+D +
Sbjct: 407 PRPRPGWNQPVPQGQGYPMQPNYPI-RNQRGPGGAPNHPRGPGGAPNQRPRGPMDPNQQV 465
Query: 484 PRRDASVGQPMPITAL-STALANASP------------EQQRTLLGESLYPLVEQLERDA 530
P+ P P TA + A+ + P EQQ LGE LYPL+ + DA
Sbjct: 466 PQAANPQPTPAPATAQEAVAVPSEQPQITLEYVEALPREQQNPFLGELLYPLIHASQPDA 525
Query: 531 AAKVTGMLLE-MDQTEVLHLLESPEALKAKVAEAMEVLRSVAQ 572
A K+TGMLL+ + E+ L + + L K+ EA+EVL SV+Q
Sbjct: 526 AGKITGMLLDSLTVQELFELAQRADKLGEKIKEALEVL-SVSQ 567
>gi|402882426|ref|XP_003904744.1| PREDICTED: polyadenylate-binding protein 1-like [Papio anubis]
Length = 614
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 279/608 (45%), Positives = 378/608 (62%), Gaps = 68/608 (11%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
ASG+ + SLYVGDL +VT++ LY+ FS G +LS+RVCRD++TRRSLGY Y+N+ P
Sbjct: 3 ASGSGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF L + IRIM+S RDP +RKSG GNIFIKNL+ SID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D G S+GFGFV FE E+AQ AI+ +NGML+ND++VFVGHF ++ERE
Sbjct: 123 GNILSCKVVCDEHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRREREA 181
Query: 202 V--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
A +F N++VKNL ++ L+ +F ++G + S VMRD G S+CFGFVNFE
Sbjct: 182 ELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
++A KAV +NGK+ R Y G+AQK+ ER+ ELK +FEQ ++ + ++QG+NLY+KNL
Sbjct: 242 EEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
DSIDD+KL++ FS +G ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +
Sbjct: 302 DDSIDDDKLRKEFSPYGVITSAKVMTE-GGHSKGFGFVCFSSPEEATKAVTEMNGRIVGT 360
Query: 380 KPLYVAVAQRKEERRARLQAQFSQ----MRPVA--------------------------- 408
KPLYVA+AQRKEER+A L Q+ Q MR ++
Sbjct: 361 KPLYVALAQRKEERKAILTNQYMQRLSTMRTLSNPLLGSFQQPSSYFLPAVPQPPAQAAY 420
Query: 409 --MGPSVP----PRMPMYPPGPSGLGQQFLYG-------------QAPPAIIPPQMPPRG 449
GP P PR PP PS QA + P+M P
Sbjct: 421 YGCGPVTPTQPAPRWTSQPPRPSCASMVRPPVMPRRPPAHISSVRQASTQV--PRMVP-- 476
Query: 450 HAYRYPLGRNMQDFPFDMGAGS----MLPVPVDMGAGIPRR--DASVGQP--MPITALST 501
H R P +G + +LP A R + +V P P+TA +
Sbjct: 477 HTQRVANIGTQTTGPGGVGCCTPGRPLLPYKCSSAAHSTYRIQEPAVHVPGQEPLTA--S 534
Query: 502 ALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVA 561
LA A +Q+ ++GE LYPL+ + A K+TGMLLE+D +E+L +LESPE+L AK+
Sbjct: 535 MLAAAPLHEQKQMIGERLYPLIHDVHTQLAGKITGMLLEIDNSELLLMLESPESLHAKID 594
Query: 562 EAMEVLRS 569
EA+ VL++
Sbjct: 595 EAVAVLQA 602
>gi|426200105|gb|EKV50029.1| hypothetical protein AGABI2DRAFT_190442 [Agaricus bisporus var.
bisporus H97]
Length = 673
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 278/630 (44%), Positives = 380/630 (60%), Gaps = 96/630 (15%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVG+LD VT++ L+++F+ +G V S+RVCRD TRRSLGY YVNY N AD RAL
Sbjct: 41 SASLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERAL 100
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LN++ + N++ RIM+S RDP++RK+G GN+FIKNLD++ID+KALHDTF +FGN+LSCK
Sbjct: 101 EQLNYSLIKNRACRIMWSQRDPALRKTGQGNVFIKNLDEAIDNKALHDTFVAFGNVLSCK 160
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKT 206
+ATD G+SKG+GFV +E E+A NAI +NGML+NDK+V+VGH + ++ER++ +K
Sbjct: 161 VATDEHGRSKGYGFVHYETAEAADNAIKSVNGMLLNDKKVYVGHHISRKERQSKLDEMKA 220
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
+F N+++KNLD T E+ ++F YG +TS++V D +GKSK FGFVN+E ++A +AV
Sbjct: 221 QFTNLYIKNLDTEVTQEEFTELFTRYGNVTSSLVATDEEGKSKGFGFVNYERHEEAQRAV 280
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
+ L+ ++ +V +AQKK+ERE EL+ +EQA E + K+QG+NLYIKNL D DD+
Sbjct: 281 DELHDTDLKGKKLFVARAQKKAEREDELRRSYEQAKLEKLSKYQGVNLYIKNLEDDFDDD 340
Query: 327 KLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 386
KL+ F FG ITSCKVMRD G SKG GFV FS+P+EA++A+AEMN KMI +KPLYV++
Sbjct: 341 KLRAEFEPFGAITSCKVMRDEKGTSKGFGFVCFSSPDEATKAVAEMNNKMIGTKPLYVSL 400
Query: 387 AQRKEERRARLQAQFSQMRPVAM--------------GP--------------------- 411
AQR+E RR +L++Q +Q + M GP
Sbjct: 401 AQRREVRRQQLESQIAQRNQIRMQQAAAAGVPGGYINGPMYYPPGPGFPPQGRGMMGYGQ 460
Query: 412 --SVPPRMPMYPPG--PSGLGQQFLYGQAPPAIIPPQMPPRGHAYRYPLGRNMQDFPFDM 467
+PPR+ YP G PS YGQ P P PPRG A R P+ R P
Sbjct: 461 PGMMPPRI-RYPNGQVPSMPPVPGPYGQGPQPYGMPGYPPRG-APRPPVARG----PGSS 514
Query: 468 GAGSMLPVPVDMGA---GIPRRDASVGQPM------------------------------ 494
+P+P G G R A G P
Sbjct: 515 PTHPSVPMPRANGPAPNGGAARPAPQGAPTGSRAPPPGAPAPGRAPQPAYNKPQARPQGA 574
Query: 495 PITALSTA----------------LANASPEQQRTLLGESLYPLVEQLERDAAAKVTGML 538
P+TA A LA ASP +Q+ +LGE +Y + + + A K+TGML
Sbjct: 575 PVTAQPAAVPAPQQSGLPNLTADQLAAASPMEQKQMLGEVIYMRIVPSQPELAGKITGML 634
Query: 539 LEMDQTEVLHLLESPEALKAKVAEAMEVLR 568
LEMD E+L LL+S EA+ AKV EA VL+
Sbjct: 635 LEMDNNELLALLDSEEAMNAKVQEANTVLQ 664
>gi|355563109|gb|EHH19671.1| Polyadenylate-binding protein 1-like protein [Macaca mulatta]
Length = 614
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 282/617 (45%), Positives = 380/617 (61%), Gaps = 70/617 (11%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
ASG+ + SLYVGDL +VT++ LY+ FS G +LS+RVCRD++TRRSLGY Y+N+ P
Sbjct: 3 ASGSGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF L + IRIM+S RDP +RKSG GNIFIKNL+ SID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D G S+GFGFV FE E+AQ AI+ +NGML+ND++VFVGHF ++ERE
Sbjct: 123 GNILSCKVVCDEHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRREREA 181
Query: 202 V--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
A +F N++VKNL ++ L+ +F ++G + S VMRD G S+CFGFVNFE
Sbjct: 182 ELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
++A KAV +NGK+ R Y G+AQK+ ER+ ELK +FEQ ++ + ++QG+NLY+KNL
Sbjct: 242 EEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
DSIDD+KL++ FS +G ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +
Sbjct: 302 DDSIDDDKLRKEFSPYGVITSAKVMTE-GGHSKGFGFVCFSSPEEATKAVTEMNGRIVGT 360
Query: 380 KPLYVAVAQRKEERRARLQAQF----SQMRPVA--------------------------- 408
KPLYVA+AQRKEER+A L Q+ S MR ++
Sbjct: 361 KPLYVALAQRKEERKAILTNQYMQRLSTMRTLSNPLLGSFQQPSSYFLPAVPQPPAQAAY 420
Query: 409 --MGPSVP----PRMPMYPPGPSGLGQQFLYG-------------QAPPAIIPPQMPPRG 449
GP P PR PP PS QA + P+M P
Sbjct: 421 YGCGPVTPTQPAPRWTSQPPRPSCASMVRPPVMPRRPPAHISSVRQASTQV--PRMVP-- 476
Query: 450 HAYRYPLGRNMQDFPFDMGAGS----MLPVPVDMGAGIPRR--DASVGQP--MPITALST 501
H R P +G + +LP A R + +V P P+TA +
Sbjct: 477 HTQRVANIGTQTTGPGGVGCCTPGRPLLPYKCSSAAHNTYRVQEPAVHIPGQEPLTA--S 534
Query: 502 ALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVA 561
LA A +Q+ ++GE LYPL+ + A K+TGMLLE+D +E+L +LESPE+L AK+
Sbjct: 535 MLAAAPLHEQKQMIGERLYPLIHDVHTQLAGKITGMLLEIDNSELLLMLESPESLHAKID 594
Query: 562 EAMEVLRSVAQQQANNP 578
EA+ VL+ A Q P
Sbjct: 595 EAVAVLQ--AHQAVEQP 609
>gi|148227542|ref|NP_001082094.1| embryonic polyadenylate-binding protein A [Xenopus laevis]
gi|94711253|sp|Q98SP8.2|EPABA_XENLA RecName: Full=Embryonic polyadenylate-binding protein A;
Short=Embryonic poly(A)-binding protein A; Short=ePAB-A;
Short=ePABP-A; AltName: Full=XePABP-A
gi|51258324|gb|AAH80020.1| EPAB protein [Xenopus laevis]
Length = 629
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 279/634 (44%), Positives = 389/634 (61%), Gaps = 76/634 (11%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+G + SLY+GDL +VT++ LY+ FS G ++S+RVCRD++TRRSL Y Y+N+ P
Sbjct: 3 ATGAGYPLASLYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLSYAYINFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + + IRIM+S RDP +RKSG GN+FIKNLD+SID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFEVIKGRPIRIMWSQRDPGLRKSGVGNVFIKNLDESIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D G S+G+GFV FE E+A AI +NGML+ND++VFVGHF ++ERE
Sbjct: 123 GNILSCKVVCDEHG-SRGYGFVHFETHEAANRAIQTMNGMLLNDRKVFVGHFKSRREREL 181
Query: 202 V--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
A +F NV++KN E D+ L++IF +G S VM D G+S+ FGFVN+ N
Sbjct: 182 EYGAKVMEFTNVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDDSGRSRGFGFVNYGNH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
++A KAV +NGK+ + R YVG+AQK+ ER+ ELK +FEQ +E ++++QG+NLY+KNL
Sbjct: 242 EEAQKAVSEMNGKEVNGRMIYVGRAQKRIERQSELKRKFEQIKQERINRYQGVNLYVKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D IDD++L++ F +GTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +
Sbjct: 302 DDGIDDDRLRKEFLPYGTITSAKVMTE-GGHSKGFGFVCFSSPEEATKAVTEMNGRIVST 360
Query: 380 KPLYVAVAQRKEERRARLQAQFSQ----MRPVAMGPSV----------------PPRMPM 419
KPLYVA+AQRKEER+A L Q+ Q MR + GP + PP
Sbjct: 361 KPLYVALAQRKEERKAILTNQYMQRLATMRAMP-GPLLGSFQQPANYFLSAMPQPPNRTF 419
Query: 420 YPPGPSG----LGQQFLYGQAPPAIIPPQ------MPPRGHAYRYPLGRNMQDFP----- 464
Y P P Q + PP PP P R + + + P
Sbjct: 420 YSPNPVAPVRPAPQWASHQSRPPQYQPPTPLMRAVQPRRMSSNISTMKQASTQVPRVAQH 479
Query: 465 ----FDMG---AGSMLPVPVDMGAGIPRRDASVG----QPM------------------- 494
++G AG+ V M +P S G QP+
Sbjct: 480 SQRVANIGTQTAGARAQVNPSMMRTMPHYKYSCGVRNVQPIVSSTHLQQVMEPAVLMQGQ 539
Query: 495 -PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESP 553
P+TA + LA A P++Q+ +LGE +YP++ ++ A K+TGMLLE+D +E+LH+LESP
Sbjct: 540 EPLTA--SLLAGAPPQEQKQMLGERIYPVIHEMHPTLAGKITGMLLEIDNSELLHMLESP 597
Query: 554 EALKAKVAEAMEVLRSVAQQQANNPADQLASLSL 587
E+L +KV EA+ VL++ QA A + A SL
Sbjct: 598 ESLHSKVEEAVAVLQA---HQAKENAQKSAQPSL 628
>gi|321261800|ref|XP_003195619.1| polyadenylate-binding protein [Cryptococcus gattii WM276]
gi|317462093|gb|ADV23832.1| polyadenylate-binding protein, putative [Cryptococcus gattii WM276]
Length = 675
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 274/599 (45%), Positives = 375/599 (62%), Gaps = 60/599 (10%)
Query: 28 LTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARA 87
++ SLYVG+LD +VT++ L+++F+ +G V S+RVCRD TRRSLGY YVNY N AD RA
Sbjct: 46 VSASLYVGELDPSVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERA 105
Query: 88 LDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSC 147
L+ LN++ + +S RIM+S RDP++RK+G GNIFIKNLD+SID+KALHDTF++FG+ILSC
Sbjct: 106 LEHLNYSLIKGQSCRIMWSQRDPALRKTGQGNIFIKNLDQSIDNKALHDTFAAFGDILSC 165
Query: 148 KIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER--ETVAIK 205
K+ TD +G+S+GF FV + E+A AI +NGML+NDK+V+VGH + K+ER + ++
Sbjct: 166 KVGTDENGKSRGFAFVHYSTGEAADAAIKAVNGMLLNDKKVYVGHHVGKKERLSKVEELR 225
Query: 206 TKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKA 265
+F NV++KN+D TD + + + +G S + RD G SK FGFVN+EN + A +A
Sbjct: 226 AQFTNVYIKNVDLEVTDAEFEDLVKPFGPTISVALSRDEQGVSKGFGFVNYENHESAKQA 285
Query: 266 VEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDD 325
V+ LN K+ + ++ Y G+AQ KSERE ELK E+ E K G+NLYIKNL D DD
Sbjct: 286 VDELNEKEINGKKLYAGRAQTKSEREAELKKSHEEKRIENEAKSAGVNLYIKNLDDEWDD 345
Query: 326 EKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVA 385
++L+ F FGTITS KVMRD SG+S+G GFV +S+P+EA++A++EMNGKMI +KPLYVA
Sbjct: 346 DRLRAEFEAFGTITSSKVMRDDSGVSRGFGFVCYSSPDEATKAVSEMNGKMIGTKPLYVA 405
Query: 386 VAQRKEERRARLQAQFSQMR----------PVAMG-------------------PSVPP- 415
+AQRK+ RR L++Q +Q P G P +PP
Sbjct: 406 LAQRKDVRRQALESQIAQRAQQRMQYGAGFPGMQGYMGQPMYGYPPMPGYGQPMPGMPPV 465
Query: 416 RMPM--YPPGPSGLGQ---------QFLYGQAPPAIIPPQMPPRGHAYRYPL---GRNMQ 461
R PM YP P + Q Q L G P +PPQ+P G A YP+ G +
Sbjct: 466 RGPMMGYPGAPQNMMQSRPRFNPNGQPLPGGVPAYGMPPQVPYPG-APGYPVRPGGARIP 524
Query: 462 DFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALSTA-------------LANASP 508
P G + P PV G+P G MP A LA A+P
Sbjct: 525 AAPNANGPRNGGPSPVGAPQGLPAGSIPRGGQMPARPHEQAAPAPQAGRLDAQSLARAAP 584
Query: 509 EQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVL 567
+Q+ +LGE+LYPL+ + + + A K+TGMLLEMD E+LHL+ES AL+ KV EA+ VL
Sbjct: 585 AEQKQMLGEALYPLIHETQPELAGKITGMLLEMDNAELLHLVESQPALQEKVDEALRVL 643
>gi|58271356|ref|XP_572834.1| polyadenylate-binding protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|134114714|ref|XP_774065.1| hypothetical protein CNBH1100 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338819167|sp|P0CP47.1|PABP_CRYNB RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|338819168|sp|P0CP46.1|PABP_CRYNJ RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|50256695|gb|EAL19418.1| hypothetical protein CNBH1100 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229093|gb|AAW45527.1| polyadenylate-binding protein, putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 673
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 274/599 (45%), Positives = 375/599 (62%), Gaps = 60/599 (10%)
Query: 28 LTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARA 87
++ SLYVG+LD +VT++ L+++F+ +G V S+RVCRD TRRSLGY YVNY N AD RA
Sbjct: 44 VSASLYVGELDPSVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERA 103
Query: 88 LDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSC 147
L+ LN++ + +S RIM+S RDP++RK+G GNIFIKNLD+SID+KALHDTF++FG+ILSC
Sbjct: 104 LEHLNYSLIKGQSCRIMWSQRDPALRKTGQGNIFIKNLDQSIDNKALHDTFAAFGDILSC 163
Query: 148 KIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER--ETVAIK 205
K+ TD +G+S+GF FV + E+A AI +NGML+NDK+V+VGH + K+ER + ++
Sbjct: 164 KVGTDENGKSRGFAFVHYSTGEAADAAIKAVNGMLLNDKKVYVGHHVGKKERLSKVEELR 223
Query: 206 TKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKA 265
+F NV++KN+D TD + + + +G S + RD G SK FGFVN+EN + A KA
Sbjct: 224 AQFTNVYIKNVDLEVTDAEFEDLVKPFGPTISVALSRDEKGVSKGFGFVNYENHESARKA 283
Query: 266 VEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDD 325
V+ LN K+ + ++ Y G+AQ KSERE ELK E+ E K G+NLY+KNL D DD
Sbjct: 284 VDELNEKEVNGKKLYAGRAQTKSEREAELKKSHEEKRLENEAKSAGVNLYVKNLDDEWDD 343
Query: 326 EKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVA 385
++L+ F FGTITS KVMRD SG+S+G GFV +S+P+EA++A++EMNGKMI +KPLYVA
Sbjct: 344 DRLRAEFEAFGTITSSKVMRDDSGVSRGFGFVCYSSPDEATKAVSEMNGKMIGTKPLYVA 403
Query: 386 VAQRKEERRARLQAQFSQMR----------PVAMG-------------------PSVPP- 415
+AQRK+ RR L++Q +Q P G P +PP
Sbjct: 404 LAQRKDVRRQALESQIAQRAQQRMQYGAGFPGMQGYMGQPMYGYPPMPGYGQPMPGMPPV 463
Query: 416 RMPM--YPPGPSGLGQ---------QFLYGQAPPAIIPPQMPPRGHAYRYPL---GRNMQ 461
R PM YP P + Q Q L G P +PPQ+P G A YP+ G +
Sbjct: 464 RGPMMGYPGAPQNMMQSRPRFNPNGQPLPGGVPAYGMPPQVPYPG-APGYPVRPGGARIP 522
Query: 462 DFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALSTA-------------LANASP 508
P G + P PV G+P G MP A LA A+P
Sbjct: 523 AAPNANGPRNGGPSPVGAPQGLPAGSIPRGGQMPARPHEQAAPAPQAGRLDAQSLARAAP 582
Query: 509 EQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVL 567
+Q+ +LGE+LYPL+ + + + A K+TGMLLEMD E+LHL+ES AL+ KV EA+ VL
Sbjct: 583 AEQKQMLGEALYPLIHETQPELAGKITGMLLEMDNAELLHLVESQPALQEKVDEALRVL 641
>gi|301120388|ref|XP_002907921.1| polyadenylate-binding protein 1-B [Phytophthora infestans T30-4]
gi|262102952|gb|EEY61004.1| polyadenylate-binding protein 1-B [Phytophthora infestans T30-4]
Length = 640
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 292/609 (47%), Positives = 382/609 (62%), Gaps = 79/609 (12%)
Query: 27 FLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAAR 86
F T SLYVGD+ +VT++ L+++F+ VG V S+RVCRD TRRSLGY YVN+ N ADA R
Sbjct: 42 FHTASLYVGDIHPDVTEALLFEIFNAVGPVASIRVCRDAVTRRSLGYAYVNFHNVADAER 101
Query: 87 ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
ALD +NFT + RIM+S RDPS+RKSG GNIF+KNLD SID+KAL+DTFS FGNILS
Sbjct: 102 ALDTMNFTSIKGVPCRIMWSQRDPSLRKSGVGNIFVKNLDTSIDNKALYDTFSLFGNILS 161
Query: 147 CKIATDGS-GQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIK 205
CK+A + + G SKG+G+V +E E+A AI K+NGMLI +VFVG F ++Q+R
Sbjct: 162 CKVAIEHTTGNSKGYGYVHYETAEAATEAIAKINGMLIAGTEVFVGQFQKRQDRPDA--- 218
Query: 206 TKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDG--KSKCFGFVNFENADDAA 263
+ N +VKN+ TD DL K F +G + SAVVM+D ++ FGFVN+E +D A
Sbjct: 219 DDWTNCYVKNIPTQWTDADLLKEFEPFGKVLSAVVMKDNANPDHNRGFGFVNYEESDAAH 278
Query: 264 KAVEALNGKKFD-----DREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKN 318
KAV+ALNGK + D E YVGKAQK+SERE+EL+ +FEQ E ++K+QG+NLY+KN
Sbjct: 279 KAVDALNGKSYPAGEGLDTEMYVGKAQKRSERERELRNKFEQLKMERINKYQGVNLYVKN 338
Query: 319 LGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIV 378
L D + D++L+E F+E GTITS +VMRDP+G S+G GFV FSTPEEA++A+AEMNGK+I
Sbjct: 339 LDDQLSDDELREAFAECGTITSSRVMRDPNGNSRGFGFVCFSTPEEANKAVAEMNGKLIS 398
Query: 379 SKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPP 438
KP+YVA+AQRKE RRA+L+AQ +Q R G V MPM P G F YGQ
Sbjct: 399 GKPVYVALAQRKEVRRAQLEAQHAQQR---AGMVVGRGMPMGQPPMYGAAPMF-YGQ--- 451
Query: 439 AIIPPQMPPRG-HAYRYP---LGRNMQDFPFDMGA---GSMLPVPVDM-GAGIP------ 484
P Q+PP+ + YP + R +Q P GA G+ P M G G+P
Sbjct: 452 ---PGQLPPQARQGFMYPQQMMPRGVQRGPMPYGARVPGAPAPGGYPMPGYGMPMQQQRG 508
Query: 485 --------------------RRD-----------ASVGQPMPITALSTALANASPEQ--- 510
RR+ A P + + + NA PE
Sbjct: 509 QPRRGRQGPGPQGPQGAPANRRNFKYTANARNHPARDVPPQGVMPPAAPVQNAGPEPLTS 568
Query: 511 ----------QRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKV 560
Q+ ++GE LYPL+ + + + A K+TGMLLEMD E+LHLLESPEAL+AK+
Sbjct: 569 AALAAASPEIQKNMIGERLYPLIHRQQPELAGKITGMLLEMDNGELLHLLESPEALEAKI 628
Query: 561 AEAMEVLRS 569
EAM VL +
Sbjct: 629 QEAMTVLEA 637
>gi|388582290|gb|EIM22595.1| polyadenylate binding protein [Wallemia sebi CBS 633.66]
Length = 637
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 278/594 (46%), Positives = 387/594 (65%), Gaps = 65/594 (10%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVG+LD VT++ L+++F+ +G V S+RVCRD TRRSLGY YVNY N D RAL
Sbjct: 37 SASLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNLQDGERAL 96
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LN++ + N++ RIM+S RDP++RK+G GNIFIKNLD++ID+KALHDTF++FGN+LSCK
Sbjct: 97 EQLNYSLIKNRACRIMWSQRDPALRKTGQGNIFIKNLDEAIDNKALHDTFAAFGNVLSCK 156
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKT 206
+ATD +G S+G+GFV +EN ESA AI +NGML+NDK+V+VGH + K+ER+ K+
Sbjct: 157 VATDENGNSRGYGFVHYENGESASAAIQHVNGMLLNDKKVYVGHHVSKKERQAKIDEQKS 216
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
+F NVF+KNLD S DE K+I YG I SAVV +D G S+ FGFVN++N ++AAKAV
Sbjct: 217 QFTNVFIKNLDVSVDDEKFKQILEPYGEILSAVVQKDEQGNSRGFGFVNYKNHEEAAKAV 276
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
E+LN + D ++ + +AQKK+ERE+EL+ +EQA E + K+ G+NLY+KNL D DDE
Sbjct: 277 ESLNEVEVDGKKIFAARAQKKNEREEELRRNYEQAKLEKLAKYAGVNLYVKNLDDDFDDE 336
Query: 327 KLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 386
+L F FGTITS K+MRD G SKG GFV FS+P+EA++A++E++GKMI SKPLYV++
Sbjct: 337 RLVGEFEPFGTITSAKIMRDEKGTSKGFGFVCFSSPDEATKAVSELSGKMIGSKPLYVSL 396
Query: 387 AQRKEERRARLQAQFSQMRPVAM----GPSVP-----PRMPMY--PPGPSGLGQQFLYGQ 435
AQR++ RR +L++Q +Q + + VP P PMY PP + G + +YGQ
Sbjct: 397 AQRRDVRRQQLESQIAQRNQLRLQHQAAAGVPISGFMPGAPMYYQPPPGAYPGGRSMYGQ 456
Query: 436 APPAIIPPQMPPRGHAYRYPLGRNMQDF-------------------------------- 463
P PP+ PRG YP G+ +
Sbjct: 457 --PGFAPPR--PRG----YPAGQQVPGMPIPSPYGPPPQGYMPANYRPARPARANGAQVQ 508
Query: 464 ---PFDMGAGSMLPVPVDMGAGIPRRDA-SVGQPM------PITALSTALANASPEQQRT 513
P +P AG+P R A +P P++A + LANA P +Q+
Sbjct: 509 GGSPTANNVRPAVPASGPRPAGVPVRPAQGAAKPAKQEAGGPLSA--SVLANAPPAEQKQ 566
Query: 514 LLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVL 567
+LGE+LYP + ++ + A K+TGMLLEM+ +E+L LLE+ EALK+KV EA+ VL
Sbjct: 567 MLGEALYPKIFNIQPELAGKITGMLLEMENSELLFLLENEEALKSKVDEAIAVL 620
>gi|410953832|ref|XP_003983574.1| PREDICTED: polyadenylate-binding protein 1-like [Felis catus]
Length = 616
Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust.
Identities = 280/611 (45%), Positives = 377/611 (61%), Gaps = 72/611 (11%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
ASG + SLYVGDL +VT++ LY+ FS G +LS+RVCRD++TRRSLGY Y+N+ P
Sbjct: 3 ASGPGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + + IRIM+S RDP +RKSG GNIFIKNL+ SID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFEVIRGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D G S+GFGFV FE E+AQ AI +NGML+ND++VFVGHF ++ERE
Sbjct: 123 GNILSCKVVCDNHG-SRGFGFVHFETHEAAQQAIVTMNGMLLNDRKVFVGHFKSRREREA 181
Query: 202 V--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
A +F N++VKNL ++ L+ +F ++G + S VMRD G S+ FGFVNFE
Sbjct: 182 ELGARAMEFTNIYVKNLHVDVDEQGLQDLFSQFGKMLSVKVMRDDSGHSRGFGFVNFEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
++A KAV +NGK+ R YVG+AQK+ ER+ ELK +FEQ ++ + ++QG+NLY+KNL
Sbjct: 242 EEAQKAVTDMNGKEVRGRLLYVGRAQKRVERQNELKRRFEQMKQDRLTRYQGVNLYVKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
DSIDDEKL+ FS +G ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +
Sbjct: 302 DDSIDDEKLRREFSPYGVITSAKVMTE-GGHSKGFGFVCFSSPEEATKAVTEMNGRIVGT 360
Query: 380 KPLYVAVAQRKEERRARLQAQFSQMRPV--AMG---------------PSVP-------- 414
KPLYVA+AQRKEER+A L Q+ Q A+G P+VP
Sbjct: 361 KPLYVALAQRKEERKAILTNQYMQRLSTVRALGGPLLGSFQQPASYFLPAVPQPPAQTAY 420
Query: 415 ----------PRMPMYPPGPSGLGQQFLYGQAPPAII--PP-----------QMPPRGHA 451
PR PP PS PPA++ PP Q+PP
Sbjct: 421 YASSSPMQPAPRWTAQPPRPSSTYPPAASMIRPPAMLRRPPAQVSGVRQASTQVPP---- 476
Query: 452 YRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDAS------VGQPM-------PITA 498
P + + + S P G + + +S V +P P+TA
Sbjct: 477 -TVPHTQRVANIGTQTTGASGAGYPAPSGPLLTHKYSSATYNHGVQEPAVRIPGQEPLTA 535
Query: 499 LSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKA 558
+ LA A +Q+ ++GE LYPL+ A K+TGMLLE+D +E+L +LESPE+L A
Sbjct: 536 --SMLAAAPLHEQKQMIGERLYPLIYDAHTQLAGKITGMLLEIDNSELLLMLESPESLNA 593
Query: 559 KVAEAMEVLRS 569
KV EA+ VL++
Sbjct: 594 KVEEALAVLQA 604
>gi|405122394|gb|AFR97161.1| polyadenylate-binding protein [Cryptococcus neoformans var. grubii
H99]
Length = 670
Score = 497 bits (1279), Expect = e-138, Method: Compositional matrix adjust.
Identities = 274/599 (45%), Positives = 375/599 (62%), Gaps = 60/599 (10%)
Query: 28 LTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARA 87
++ SLYVG+LD +VT++ L+++F+ +G V S+RVCRD TRRSLGY YVNY N AD RA
Sbjct: 46 VSASLYVGELDPSVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERA 105
Query: 88 LDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSC 147
L+ LN++ + +S RIM+S RDP++RK+G GNIFIKNLD+SID+KALHDTF++FG+ILSC
Sbjct: 106 LEHLNYSLIKGQSCRIMWSQRDPALRKTGQGNIFIKNLDQSIDNKALHDTFAAFGDILSC 165
Query: 148 KIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER--ETVAIK 205
K+ TD +G+S+GF FV + E+A AI +NGML+NDK+V+VGH + K+ER + ++
Sbjct: 166 KVGTDENGKSRGFAFVHYSTGEAADAAIKAVNGMLLNDKKVYVGHHVGKKERLSKVEELR 225
Query: 206 TKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKA 265
+F NV++KN+D TD + + + +G S + RD G SK FGFVN+E+ + A KA
Sbjct: 226 AQFTNVYIKNVDLEVTDAEFEDLVKPFGPTISVALSRDEKGVSKGFGFVNYEHHESARKA 285
Query: 266 VEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDD 325
V+ LN K+ + ++ Y G+AQ KSERE ELK E+ E K G+NLYIKNL D DD
Sbjct: 286 VDELNEKEVNGKKLYAGRAQTKSEREAELKKSHEEKRLENEAKSAGVNLYIKNLDDEWDD 345
Query: 326 EKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVA 385
++L+ F FGTITS KVMRD SG+S+G GFV +S+P+EA++A++EMNGKMI +KPLYVA
Sbjct: 346 DRLRAEFEAFGTITSSKVMRDDSGVSRGFGFVCYSSPDEATKAVSEMNGKMIGTKPLYVA 405
Query: 386 VAQRKEERRARLQAQFSQMR----------PVAMG-------------------PSVPP- 415
+AQRK+ RR L++Q +Q P G P +PP
Sbjct: 406 LAQRKDVRRQALESQIAQRAQQRMQYGTGFPGMQGYMGQPMYGYPPMPGYGQPMPGMPPV 465
Query: 416 RMPM--YPPGPSGLGQ---------QFLYGQAPPAIIPPQMPPRGHAYRYPL---GRNMQ 461
R PM YP P + Q Q L G P +PPQ+P G A YP+ G +
Sbjct: 466 RGPMMGYPGAPQNMMQSRPRFNPNGQPLPGGVPAYGMPPQVPYPG-APGYPVRPGGARIP 524
Query: 462 DFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALSTA-------------LANASP 508
P G + P PV G+P G MP A LA A+P
Sbjct: 525 AAPNANGPRNGGPSPVGAPQGLPAGSMPRGGQMPARPHEQAAPAPQAGRLDAQSLARAAP 584
Query: 509 EQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVL 567
+Q+ +LGE+LYPL+ + + + A K+TGMLLEMD E+LHL+ES AL+ KV EA+ VL
Sbjct: 585 AEQKQMLGEALYPLIHETQPELAGKITGMLLEMDNAELLHLVESQPALQEKVDEALRVL 643
>gi|351703575|gb|EHB06494.1| Polyadenylate-binding protein 1-like protein [Heterocephalus
glaber]
Length = 605
Score = 497 bits (1279), Expect = e-138, Method: Compositional matrix adjust.
Identities = 279/610 (45%), Positives = 374/610 (61%), Gaps = 57/610 (9%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A G + +SLYVGDL +VT++ LY+ FS VG +LS+RVCRD++TRRSLGY Y+N+ P
Sbjct: 3 AGGQGYPLSSLYVGDLHPDVTEAMLYETFSPVGPILSIRVCRDVATRRSLGYAYINFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + + IRIM+S RDP +RKSG GN+FIKNL+ SID KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFEVIKGQPIRIMWSQRDPGLRKSGVGNVFIKNLEDSIDSKALYDTFSTF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+A D G S+GFGFV FE E+AQ AI +NGML+ND++VFVGHF +ERE
Sbjct: 123 GNILSCKVACDEHG-SRGFGFVHFETNEAAQQAISTMNGMLLNDRKVFVGHFKSHREREA 181
Query: 202 V--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
A F N++VKNL ++ L+ +F E+G + S VMRD G S+ FGFVNFE
Sbjct: 182 ELGAQALAFTNIYVKNLHVDMDEQGLQDLFFEFGKMLSVKVMRDNSGHSRGFGFVNFEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
++A KAV+ +NGK+ ++ YVG+AQK+ ER+ ELK +FEQ ++ ++QG+NLY+KNL
Sbjct: 242 EEAQKAVDHMNGKEVSGQQLYVGRAQKRGERQNELKRRFEQMKQDRQTRYQGVNLYVKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
DSI DEKL+ +FS +G ITS KVM + G SKG GFV FS+PEEA++A+ EMNG ++ +
Sbjct: 302 DDSISDEKLRTVFSPYGVITSAKVMTE-GGHSKGFGFVCFSSPEEATKAVTEMNGCIVGT 360
Query: 380 KPLYVAVAQRKEERRARLQAQFSQM--------RPVAMGPSVPPRMPMYPPGPSGLGQQF 431
KPLYVA+AQRKEER+A L Q+ Q RPV MG P P Q
Sbjct: 361 KPLYVALAQRKEERKAILTNQYMQRLSTVQALGRPV-MGSFQQPNSYFLPAVAQPPAQAT 419
Query: 432 LYGQAPPAIIPPQMPPRGHA--------------------------------YRYPLGRN 459
YG ++ P Q PR A Y P +
Sbjct: 420 CYG-GSGSVAPVQPAPRWTAQPQRASLVRPPGLPRRPRAHVSSVRQASTQVPYLAPHTKK 478
Query: 460 MQDFPFD-MGAGSMLPV------PVDMGAGIPRRDASVGQPMPITALSTALANASPEQQR 512
+ + MGA V G+P V P+TA + LA A +Q+
Sbjct: 479 VANIGTQTMGASRACSTEGPSLSAVLTAHGVPEPAVHVPGQEPLTA--SMLAAAPLHEQK 536
Query: 513 TLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQ 572
++GE LY L+ ++ A K+TGMLLE+D +E+L +LESPE+L+AKV EA+ VL+ A
Sbjct: 537 QMIGERLYRLIPEVYAALAGKITGMLLEIDNSELLLMLESPESLQAKVEEAVAVLQ--AH 594
Query: 573 QQANNPADQL 582
Q P + +
Sbjct: 595 QAMEQPKEYM 604
>gi|148539604|ref|NP_001091917.1| polyA-binding protein [Strongylocentrotus purpuratus]
gi|126722149|emb|CAM57104.1| polyA-binding protein [Strongylocentrotus purpuratus]
Length = 640
Score = 496 bits (1278), Expect = e-137, Method: Compositional matrix adjust.
Identities = 279/624 (44%), Positives = 384/624 (61%), Gaps = 87/624 (13%)
Query: 24 GNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPAD 83
G + SLYVGDL +VT++ L++ FS G +LS+RVCRD+ TRRSLGY YVN+ PAD
Sbjct: 5 GQNYPMNSLYVGDLHADVTEALLFEKFSTAGPILSIRVCRDMITRRSLGYAYVNFQQPAD 64
Query: 84 AARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGN 143
A RALD +NF L + IRIM+S RDPS+RKSG GN+FIKNLDKSID+KA++DTFS+FG+
Sbjct: 65 AERALDTMNFDTLKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGH 124
Query: 144 ILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER--ET 201
ILSCK+ TD +G +KG+GFV FE +E+A AI+K+NGML+N K+V+VG+F+ ++ER +
Sbjct: 125 ILSCKVVTDENGVNKGYGFVHFETQEAANKAIEKVNGMLLNGKKVYVGYFIPRKERLMQM 184
Query: 202 VAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADD 261
+ +F NVF+KNL E D L + G+YG+I SA +M D D KSK FGF++FE+ +
Sbjct: 185 GDHQKQFTNVFIKNLAEDVDDGKLAEFGGQYGSILSAKIMFD-DSKSKGFGFISFEDHEA 243
Query: 262 AAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGD 321
A V+ +NG + + R Y G+AQKK+ER ELK +FE +E ++QG+NLYIKNL D
Sbjct: 244 ANDFVKTINGSEVNGRTLYAGRAQKKAERAAELKARFEALKQERSTRYQGVNLYIKNLDD 303
Query: 322 SIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKP 381
IDDE+L++ FS +GTITS KVM D SKG GFV FS+PEEA++A+ EMNG+++V+KP
Sbjct: 304 EIDDERLRKEFSRYGTITSAKVMSDDKANSKGFGFVCFSSPEEATKAVTEMNGRILVAKP 363
Query: 382 LYVAVAQRKEERRARLQAQF-----SQMRPVAMGPSVPPRMPMY---------------- 420
LYVA+AQRK+ERRA+L +Q+ Q+R V S P P+Y
Sbjct: 364 LYVALAQRKDERRAQLASQYMQRVAPQVR-VGQQASQQPVNPVYPTMAYHYAAMPQAQRN 422
Query: 421 --PPG----------------------------PSGLGQQF-------LYGQA----PPA 439
P G P G+QF GQ P
Sbjct: 423 IFPAGQLAQVRHPRWSQQPQQARTAAQPNFQTIPGAAGRQFGAPRAGTATGQVRQPMPAT 482
Query: 440 IIPPQMPPRGH---AYRYPLGRNMQDFPFDMGAGSMLPVPVDMGA-GIPRRDASVGQP-- 493
+P Q P G P + M+ +GAG+ L +PR+ P
Sbjct: 483 RVPVQAAPAGQRVGGMGAPTQQQMR-----LGAGAQLSAAKQYPKFAVPRQGMPGQMPAE 537
Query: 494 -MPITAL---------STALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQ 543
+P+ AL S LA+A P++Q+ +LGE L+ ++ + +D A K+TGMLLE+D
Sbjct: 538 NVPVQALHVPGQEPLTSAMLASALPQEQKQMLGERLFSIISETHKDLAGKITGMLLEIDN 597
Query: 544 TEVLHLLESPEALKAKVAEAMEVL 567
+E+LH+LE EAL+ KV EA++VL
Sbjct: 598 SELLHMLEVQEALEKKVEEAVQVL 621
>gi|19114289|ref|NP_593377.1| mRNA export shuttling protein [Schizosaccharomyces pombe 972h-]
gi|3123239|sp|P31209.2|PABP_SCHPO RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|2104439|emb|CAB08762.1| mRNA export shuttling protein [Schizosaccharomyces pombe]
Length = 653
Score = 496 bits (1277), Expect = e-137, Method: Compositional matrix adjust.
Identities = 272/585 (46%), Positives = 373/585 (63%), Gaps = 36/585 (6%)
Query: 20 AGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYA 79
A SG + SLYVG+LD +VT++ L++LF+ +G V S+RVCRD TRRSLGY YVN+
Sbjct: 70 ATPSGTAPTSASLYVGELDPSVTEAMLFELFNSIGPVASIRVCRDAVTRRSLGYAYVNFH 129
Query: 80 NPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFS 139
N D +ALD LN+T + + RIM+S RDPS+RK GTGN+FIKNLD +ID+KALHDTFS
Sbjct: 130 NMEDGEKALDELNYTLIKGRPCRIMWSQRDPSLRKMGTGNVFIKNLDPAIDNKALHDTFS 189
Query: 140 SFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER 199
+FG ILSCK+A D G +KG+GFV F++ ESA AI+ +NGML+NDK+V+VGH + ++ER
Sbjct: 190 AFGKILSCKVAVDELGNAKGYGFVHFDSVESANAAIEHVNGMLLNDKKVYVGHHVSRRER 249
Query: 200 ETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFE 257
++ A+K F NV++KNLD T+++ +FG++G ITS +++D + K + FGFVN+
Sbjct: 250 QSKVEALKANFTNVYIKNLDTEITEQEFSDLFGQFGEITSLSLVKDQNDKPRGFGFVNYA 309
Query: 258 NADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIK 317
N + A KAV+ LN K++ ++ YVG+AQKK ERE+EL+ ++EQ E ++K+QG+NL+IK
Sbjct: 310 NHECAQKAVDELNDKEYKGKKLYVGRAQKKHEREEELRKRYEQMKLEKMNKYQGVNLFIK 369
Query: 318 NLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMI 377
NL D +DDE+LK FS FGTITS K+M D G SKG GFV ++TPEEA++A+ EMN +M+
Sbjct: 370 NLQDEVDDERLKAEFSAFGTITSAKIMTDEQGKSKGFGFVCYTTPEEANKAVTEMNQRML 429
Query: 378 VSKPLYVAVAQRKEERRARLQAQF---SQMR--------------------PVAMGPSVP 414
KPLYVA+AQRKE RR++L+AQ +Q R P+ GP
Sbjct: 430 AGKPLYVALAQRKEVRRSQLEAQIQARNQFRLQQQVAAAAGIPAVQYGATGPLIYGPGGY 489
Query: 415 PRMPMYPPGPSGLGQQFLYGQAPPAI----IPPQMPPRGHAYRYPLGRNMQDFPFDMGAG 470
P P +G G + G P +P Q P G A YP G N + G
Sbjct: 490 P----IPAAVNGRGMPMVPGHNGPMPMYPGMPTQFPAGGPAPGYP-GMNARGPVPAQGRP 544
Query: 471 SMLPVPVDMGAGIPRRDASVGQP-MPITALSTALANASPEQQRTLLGESLYPLVEQLERD 529
M+P V AG +A P MP + LA E ++ +LGE LYP V E
Sbjct: 545 MMMPGSVP-SAGPAEAEAVPAVPGMPERFTAADLAAVPEESRKQVLGELLYPKVFVREEK 603
Query: 530 AAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQ 574
+ K+TGMLLEM +E+L LLE AL +V EA+ VL+ Q+
Sbjct: 604 LSGKITGMLLEMPNSELLELLEDDSALNERVNEAIGVLQEFVDQE 648
>gi|301763992|ref|XP_002917400.1| PREDICTED: polyadenylate-binding protein 1-like [Ailuropoda
melanoleuca]
Length = 611
Score = 496 bits (1277), Expect = e-137, Method: Compositional matrix adjust.
Identities = 281/601 (46%), Positives = 378/601 (62%), Gaps = 57/601 (9%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
ASG + SLYVGDL +VT++ LY+ FS G +LS+RVCRD++TRRSLGY Y+N+ P
Sbjct: 3 ASGPGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + + +RIM+S RDP +RKSG GNIFIKNL+ SID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFEVIKGQPVRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D G S+GFGFV FE E+A AI +NGML+ND++VFVGHF ++ERE
Sbjct: 123 GNILSCKVVCDDHG-SRGFGFVHFETHEAAHQAIATMNGMLLNDRKVFVGHFKSRREREA 181
Query: 202 V--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
A +F N++VKNL ++ L+ +F ++G + S VMRD G S+ FGFVNFE
Sbjct: 182 ELGARAMEFTNIYVKNLHVDVDEQGLQDLFSQFGKMLSVKVMRDDIGHSRGFGFVNFEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
++A KAV +NGK+ R YVG+AQK+ ER+ ELK +FEQ ++ ++QG+NLY+KNL
Sbjct: 242 EEAQKAVMDMNGKEVSGRLLYVGRAQKRVERQNELKRRFEQMKQDRATRYQGVNLYVKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
DSIDDEKL++ FS +G ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +
Sbjct: 302 DDSIDDEKLRKEFSPYGVITSAKVMTE-GGHSKGFGFVCFSSPEEATKAVTEMNGRIVGT 360
Query: 380 KPLYVAVAQRKEERRARLQAQFSQMRPV--AMG---------------PSVP-------- 414
KPLYVA+AQRKEER+A L Q+ Q A+G P+VP
Sbjct: 361 KPLYVALAQRKEERKAILTNQYMQRLSTVRALGGPLLGSFQQPASYFLPAVPQPPAQAAY 420
Query: 415 -PRMPMYPPGPSGLGQQFLYGQA----PPAII--PP-----------QMPPRG-HAYRYP 455
P P P Q A PPA++ PP Q+PP G H R
Sbjct: 421 YASSPSVQPAPRWTAQPPRVSSASMVRPPAMLRRPPAQVNSVRQASTQVPPPGPHTQRVA 480
Query: 456 -LGRNM---QDFPFDMGAGSMLPVPVDMGAGIP-RRDASVGQP--MPITALSTALANASP 508
+G + G +L A P R+++V P P+TA + LA A
Sbjct: 481 NIGTQTTGASGVGYSTPTGPVLTHKYSSAAHNPGVRESAVCIPGQEPLTA--SMLAAAPL 538
Query: 509 EQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLR 568
+Q+ ++GE LYPL+ A K+TGMLLE+D +E+L +LESPE+L AKV EA+ VL+
Sbjct: 539 HEQKQMIGERLYPLIYDTHTQLAGKITGMLLEIDNSELLLMLESPESLNAKVEEALAVLQ 598
Query: 569 S 569
+
Sbjct: 599 A 599
>gi|340719920|ref|XP_003398392.1| PREDICTED: polyadenylate-binding protein 1-like isoform 2 [Bombus
terrestris]
Length = 609
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 286/627 (45%), Positives = 384/627 (61%), Gaps = 117/627 (18%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL ++T++ L++ FS G VLS+RVCRD+ TRRSLGY YVN+ PADA RALD
Sbjct: 12 SLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF + + IRIM+S RDPS+RKSG GN+FIKNLDK+ID+KA++DTFS+FGNILSCK+A
Sbjct: 72 MNFDMIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVA 131
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNN 210
D SG SKG+GFV FE +E+A +ID++NGML+N K++F N
Sbjct: 132 QDESGVSKGYGFVHFETEEAANKSIDRVNGMLLNGKKLFT-------------------N 172
Query: 211 VFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALN 270
V+VKN E TD+ LK++F +YGTITS VM DGKS+ FGFV FE+ D A +AV LN
Sbjct: 173 VYVKNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGKSRGFGFVAFEDPDAAEQAVLELN 232
Query: 271 GKKF-DDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLK 329
GK+ + + YVG+AQKK+ER+QELK +FEQ E ++++QG+NLY+KNL DSIDDE+L+
Sbjct: 233 GKEVAEGKCMYVGRAQKKAERQQELKRKFEQLKLERLNRYQGVNLYVKNLDDSIDDERLR 292
Query: 330 ELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQR 389
+ F+ FGTITS KVM + G SKG GFV FS PEEA++A+ EMNG++IV+KPLYVA+AQR
Sbjct: 293 KEFAPFGTITSAKVMME-EGRSKGFGFVCFSAPEEATKAVTEMNGRIIVTKPLYVALAQR 351
Query: 390 KEERRARLQAQFSQ----MRPVAMG-------------PSVP-----------------P 415
KE+R+A L +Q+ Q MR MG P++P P
Sbjct: 352 KEDRKAHLASQYMQRLANMRMQQMGQIFQPGGAGNYFVPTIPQPQRFYGPAQMAQIRTTP 411
Query: 416 RMPMYP--------PGPSGL-------------------------------GQQFLYG-- 434
R P P G SG GQQ + G
Sbjct: 412 RWPAQPNQVRPNAQTGSSGFATMQGPFRAAPRAPTAQPGAMRSTLSARPITGQQTVGGAN 471
Query: 435 -----QAPPAI-IPPQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDA 488
A PA+ + Q P + Y NM++ P M + P PV I ++
Sbjct: 472 MQSRSMAGPAVGVSAQSRPSNYKYT----SNMRNPPQAMAIPT--PTPVQQAVHIQGQE- 524
Query: 489 SVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLH 548
P+TA + LA A P++Q+ +LGE L+PL++ + K+TGMLLE+D +E+LH
Sbjct: 525 ------PLTA--SMLAAAPPQEQKQMLGERLFPLIQCMYPQLTGKITGMLLEIDNSELLH 576
Query: 549 LLESPEALKAKVAEAMEVLRSVAQQQA 575
+LE E+LKAKV EA+ VL++ +QA
Sbjct: 577 MLEHNESLKAKVEEAVAVLQAHQAKQA 603
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
N++ +LYV +LD ++ D +L F+ G + S +V + RS G+G+V ++ P +A
Sbjct: 270 NRYQGVNLYVKNLDDSIDDERLRKEFAPFGTITSAKVM--MEEGRSKGFGFVCFSAPEEA 327
Query: 85 ARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNL 125
+A+ +N + K + + + R RK+ + +++ L
Sbjct: 328 TKAVTEMNGRIIVTKPLYVALAQRKED-RKAHLASQYMQRL 367
>gi|119596297|gb|EAW75891.1| hCG2019100, isoform CRA_e [Homo sapiens]
Length = 617
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 275/594 (46%), Positives = 369/594 (62%), Gaps = 60/594 (10%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
ASG+ + SLYVGDL +VT++ LY+ FS G +LS+RVCRD++TRRSLGY Y+N+ P
Sbjct: 3 ASGSGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF L + IRIM+S RDP +RKSG GNIFIKNL+ SID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+A D G S+GFGFV FE E+AQ AI+ +NGML+ND++VFVGHF ++ERE
Sbjct: 123 GNILSCKVACDEHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRREREA 181
Query: 202 V--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
A +F N++VKNL ++ L+ +F ++G + S VMRD G S+CFGFVNFE
Sbjct: 182 ELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
++A KAV +NGK+ R Y G+AQK+ ER+ ELK +FEQ ++ + ++QG+NLY+KNL
Sbjct: 242 EEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
DSIDD+KL++ FS +G ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +
Sbjct: 302 DDSIDDDKLRKEFSPYGVITSAKVMTE-GGHSKGFGFVCFSSPEEATKAVTEMNGRIVGT 360
Query: 380 KPLYVAVAQRKEERRARLQAQFSQ----MRPVA---MGPSVPPRMPMYPPGPSGLGQQFL 432
KPLYVA+AQRKEER+A L Q+ Q MR ++ +G P P P Q
Sbjct: 361 KPLYVALAQRKEERKAILTNQYMQRLSTMRTLSNPLLGSFQQPSSYFLPAMPQPPAQAAY 420
Query: 433 YGQAP-----PAIIPPQMPPRG----------------------------------HAYR 453
YG P PA PPR H R
Sbjct: 421 YGCGPVTPTQPAPRWTSQPPRPSCASMVRPPVVPRRPPAHISSVRQASTQVPRTVPHTQR 480
Query: 454 YPLGRNMQDFPFDMGAGS----MLPVPVDMGAGIPRR--DASVGQP--MPITALSTALAN 505
P +G + +LP A R + +V P P+TA + LA
Sbjct: 481 VANIGTQTTGPSGVGCCTPGRPLLPCKCSSAAHSTYRVQEPAVHIPGQEPLTA--SMLAA 538
Query: 506 ASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAK 559
A +Q+ ++GE LYPL+ + A K+TGMLLE+D +E+L +LESPE+L AK
Sbjct: 539 APLHEQKQMIGERLYPLIHDVHTQLAGKITGMLLEIDNSELLLMLESPESLHAK 592
>gi|13540314|gb|AAK29408.1|AF338225_1 embryonic poly(A) binding protein [Xenopus laevis]
Length = 629
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 278/634 (43%), Positives = 388/634 (61%), Gaps = 76/634 (11%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+G + SLY+GDL +VT++ LY+ FS G ++S+RVCRD++TRRSL Y Y+N+ P
Sbjct: 3 ATGAGYPLASLYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLSYAYINFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + + IRIM+S RDP +RKSG GN+FIKNLD+SID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFEVIKGRPIRIMWSQRDPGLRKSGVGNVFIKNLDESIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D G S+G+GFV FE E+A AI +NGML+ND++VFVGHF ++ERE
Sbjct: 123 GNILSCKVVCDEHG-SRGYGFVHFETHEAANRAIQTMNGMLLNDRKVFVGHFKSRREREL 181
Query: 202 V--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
A +F NV++KN E D+ L++IF +G S VM D G+S+ FGFVN+ N
Sbjct: 182 EYGAKVMEFTNVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDDSGRSRGFGFVNYGNH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
++A KAV +NGK+ + R YVG+AQK+ ER+ ELK +FEQ +E ++++QG+NLY+KNL
Sbjct: 242 EEAQKAVSEMNGKEVNGRMIYVGRAQKRIERQSELKRKFEQIKQERINRYQGVNLYVKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D IDD++L++ F +GTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +
Sbjct: 302 DDGIDDDRLRKEFLPYGTITSAKVMTE-GGHSKGFGFVCFSSPEEATKAVTEMNGRIVST 360
Query: 380 KPLYVAVAQRKEERRARLQAQFSQ----MRPVAMGPSV----------------PPRMPM 419
KPLYVA+AQRKEER+A L Q+ Q MR + GP + PP
Sbjct: 361 KPLYVALAQRKEERKAILTNQYMQRLATMRAMP-GPLLGSFQQPANYFLSAMPQPPNRTF 419
Query: 420 YPPGPSG----LGQQFLYGQAPPAIIPPQ------MPPRGHAYRYPLGRNMQDFP----- 464
Y P P Q + PP PP P R + + + P
Sbjct: 420 YSPNPVAPVRPAPQWASHQSRPPQYQPPTPLMRAVQPRRMSSNISTMKQASTQVPRVAQH 479
Query: 465 ----FDMG---AGSMLPVPVDMGAGIPRRDASVG----QPM------------------- 494
++G AG+ V M +P S G QP+
Sbjct: 480 SQRVANIGTQTAGARAQVNPSMMRTMPHYKYSCGVRNVQPIVSSTHLQQVMEPAVLMQGQ 539
Query: 495 -PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESP 553
P+TA + LA A ++Q+ +LGE +YP++ ++ A K+TGMLLE+D +E+LH+LESP
Sbjct: 540 EPLTA--SLLAGAPLQEQKQMLGERIYPVIHEMHPTLAGKITGMLLEIDNSELLHMLESP 597
Query: 554 EALKAKVAEAMEVLRSVAQQQANNPADQLASLSL 587
E+L +KV EA+ VL++ QA A + A SL
Sbjct: 598 ESLHSKVEEAVAVLQA---HQAKENAQKSAQPSL 628
>gi|126342328|ref|XP_001373103.1| PREDICTED: polyadenylate-binding protein 1-like [Monodelphis
domestica]
Length = 942
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 280/644 (43%), Positives = 384/644 (59%), Gaps = 94/644 (14%)
Query: 11 QMSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRS 70
+ SGP V+ + SLYVGDL +VT++ LY+ FS G +LS+RVCRD+ TRRS
Sbjct: 300 EASGPLDVSGATA---IPMASLYVGDLHHDVTEAMLYEKFSPAGPILSIRVCRDMLTRRS 356
Query: 71 LGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSID 130
LGY YVN+ ADA R L+ +N + K +RIM+S RDPS+RKSG GNIFIKNL+KSID
Sbjct: 357 LGYAYVNFQQLADAERVLETMNLDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLEKSID 416
Query: 131 HKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFV 190
+KAL+ TFS+FGNILSCK+ +D +G SKG+GFV FEN+++A AI+K+NG+ +N+ +V+V
Sbjct: 417 NKALYKTFSAFGNILSCKVISDENG-SKGYGFVHFENQQAADKAIEKMNGVRLNNLKVYV 475
Query: 191 GHFLRKQERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKS 248
G F ++ERE A +F NV++KN E ++ L ++FG++G S VM D GKS
Sbjct: 476 GRFKSRKERELELGARAREFTNVYIKNFGEDMDNDRLTEVFGKFGHALSVKVMTDESGKS 535
Query: 249 KCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDK 308
K FGFV++E +DA +AV+ +NGK+F+ + YVG+AQKK ER+ ELK FEQ +E +
Sbjct: 536 KGFGFVSYEKHEDAQRAVDEMNGKEFNGKRIYVGRAQKKGERQTELKRHFEQVKQERSSR 595
Query: 309 FQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRA 368
+QG+NLY+KNL DSIDDE+L++ FS FGTITS KVM + G S+G GFV FS PEEA++A
Sbjct: 596 YQGVNLYVKNLDDSIDDERLRKAFSPFGTITSAKVMME-GGHSRGFGFVCFSAPEEAAKA 654
Query: 369 LAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQ-------MRPVAMGPSVPP---RMP 418
++EMNGK++ +KPLYVA+AQRK +R+ L Q+ Q M P PP R
Sbjct: 655 VSEMNGKLVATKPLYVALAQRKRDRQVHLTNQYMQRMASFQAMSNPVFSPYQPPPTSRYF 714
Query: 419 MYP-PGPSGLGQQFLYGQAPPAIIPPQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLP--- 474
M P P P + YGQ PQ P + P GR PF G M P
Sbjct: 715 MTPLPQPQSRPAYYPYGQI------PQFRPSPPHWAVPGGRF---HPFQTVPGVMRPRGP 765
Query: 475 ----------------VPVD----------------------------------MGAGIP 484
VPV AG+
Sbjct: 766 APAPAPAPFNPVTSSSVPVSALMNTQHIVNPSSQMLGPPNPPFMPPMRSVQQYKYAAGV- 824
Query: 485 RRDASVGQPMPITA-------------LSTALANASPEQQRTLLGESLYPLVEQLERDAA 531
R + P+P+T ++ LA P++Q+ +LGE L+PL++ L A
Sbjct: 825 RNPKHLNMPLPVTTPQPAGLFEFQEPLTASMLAATPPQEQKQILGERLFPLIQALNPALA 884
Query: 532 AKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQA 575
K+TGMLLE+D +E+LH+LESPE+L+AKV EA+ VL + ++A
Sbjct: 885 GKITGMLLEIDNSELLHMLESPESLQAKVDEAVAVLEAHQAKEA 928
>gi|313229163|emb|CBY23748.1| unnamed protein product [Oikopleura dioica]
Length = 570
Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust.
Identities = 276/572 (48%), Positives = 375/572 (65%), Gaps = 46/572 (8%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL ++T++ LYD F G VLS+RVCRD+ TRRSLGY YVN+ PADA RALD
Sbjct: 3 SLYVGDLHPDITEAMLYDKFQASGPVLSIRVCRDMVTRRSLGYAYVNFQQPADAERALDT 62
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF + K IRIM+S RDPS+R+SG GN+FIKNLD+SID+KAL+DTFSSFGNILSCK+
Sbjct: 63 MNFDVIKGKPIRIMWSQRDPSLRRSGQGNVFIKNLDRSIDNKALYDTFSSFGNILSCKVV 122
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER--ETVAIKTKF 208
D +G SKGFGFV +E+ ESAQ AI+K+NGML+ DK+VFV F + +R E F
Sbjct: 123 CDING-SKGFGFVHYESDESAQRAIEKVNGMLMEDKKVFVARFKSRNDRMREFGDAAKHF 181
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITS-AVVMRDGDGKSKCFGFVNFENADDAAKAVE 267
N+FVKNL +S + L K F ++G + S V+ + G SKC GF++F+ D A AVE
Sbjct: 182 TNLFVKNLPDSWDTDALLKNFEQFGEVVSHKVICDETTGLSKCHGFISFKEHDQAEAAVE 241
Query: 268 ALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEK 327
++ K+ + ++ Y G+AQKK+ER ELK ++E+ +E + ++QG+NLY+KNL DSIDDE
Sbjct: 242 IMHEKEIEGKKLYCGRAQKKAERSSELKAKYEKIKQERIQRYQGVNLYVKNLDDSIDDEG 301
Query: 328 LKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 387
L+E F +FG ITS KV+ D +G SKG GFV FS+PEEA++A+ EMNG++ KPLYV +A
Sbjct: 302 LREAFKQFGNITSAKVITDLNGRSKGFGFVCFSSPEEATKAVTEMNGRIFGGKPLYVGLA 361
Query: 388 QRKEERRARLQAQFSQ-----MRPVA-MGPSV------PPRMPMYPPGPSGLGQQFLYG- 434
QRKE+R+A LQ Q+ Q +R A MG V PPR + P Q F G
Sbjct: 362 QRKEDRKAHLQQQYMQRVSTGIRMQAFMGNQVVNQNFQPPRY-ILPTMQGQPVQMFPQGT 420
Query: 435 ---QAPPAIIPP----QMPPR---------GHAYRY-PLGRNMQDFPFDMGAGSMLPVPV 477
+A P PP QMP G +R P RN+Q P ++ +
Sbjct: 421 PMVRATPRWAPPNQRVQMPGMVRGRMAQQGGPQFRLTPSVRNVQ-IPSEV---------I 470
Query: 478 DMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQL-ERDAAAKVTG 536
M +P ++ G P T S+ LANA+P++Q+ +LGE L+PL++ + D A K+TG
Sbjct: 471 QMPPQMPHQNQPAGDQAPETLTSSMLANANPQEQKQMLGERLFPLIQSMAATDLAGKITG 530
Query: 537 MLLEMDQTEVLHLLESPEALKAKVAEAMEVLR 568
MLLE+D +E+LH+L++ E LK+KV EA+ VL+
Sbjct: 531 MLLEIDNSELLHMLDNRELLKSKVDEAVLVLK 562
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 99/187 (52%), Gaps = 16/187 (8%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
T+L+V +L + L F Q G+V+S +V D +T S +G++++ A A++
Sbjct: 182 TNLFVKNLPDSWDTDALLKNFEQFGEVVSHKVICDETTGLSKCHGFISFKEHDQAEAAVE 241
Query: 90 VLNFTPLNNKSIRIMYSHRDPS----------------IRKSGTGNIFIKNLDKSIDHKA 133
+++ + K + + + I++ N+++KNLD SID +
Sbjct: 242 IMHEKEIEGKKLYCGRAQKKAERSSELKAKYEKIKQERIQRYQGVNLYVKNLDDSIDDEG 301
Query: 134 LHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHF 193
L + F FGNI S K+ TD +G+SKGFGFV F + E A A+ ++NG + K ++VG
Sbjct: 302 LREAFKQFGNITSAKVITDLNGRSKGFGFVCFSSPEEATKAVTEMNGRIFGGKPLYVGLA 361
Query: 194 LRKQERE 200
RK++R+
Sbjct: 362 QRKEDRK 368
>gi|281212216|gb|EFA86376.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 562
Score = 493 bits (1270), Expect = e-137, Method: Compositional matrix adjust.
Identities = 273/567 (48%), Positives = 365/567 (64%), Gaps = 46/567 (8%)
Query: 27 FLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAAR 86
F ++SLYVGDL +V++S L+++F+QVG V ++R+CRD +TRRSL Y Y+NY N DA R
Sbjct: 5 FSSSSLYVGDLHPDVSESHLFEVFNQVGPVANLRICRDNTTRRSLSYAYINYHNSTDAER 64
Query: 87 ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
ALD LN TP+ K+ RIM+S RDPS+RKSG GNIFIKNLDK++DHKAL+DTFS+FGNILS
Sbjct: 65 ALDTLNNTPIKGKACRIMWSQRDPSLRKSGIGNIFIKNLDKTVDHKALYDTFSAFGNILS 124
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKT 206
CK+ TD + SKGFGFV +E++ESA+ AI K+NGM+IN+++VFVG F +ER +
Sbjct: 125 CKVVTDETNTSKGFGFVHYESQESAEKAIAKVNGMMINNQKVFVGPFKSSKERGATQ-EV 183
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
K+ NVF+KNL E +++ L + +G IT+ +M D GKSK FGF NFE+AD A AV
Sbjct: 184 KYTNVFIKNLSEDVSEQQLTDLLQAHGKITNLCIMTDEKGKSKGFGFANFEHADAAKGAV 243
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
E NGK F + YVG+AQKK ERE ELK +FE K+QG+NLYIKNL DSID +
Sbjct: 244 ENENGKMFSGKVIYVGRAQKKLEREAELKHKFE-------TKYQGVNLYIKNLDDSIDSD 296
Query: 327 KLKELFSEFGTITSCKVMRDPSG-ISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVA 385
KL+ FS +GTITS KVMRD G SKG GFV +STP+EAS+A+AEM+G+M+ SKPLYVA
Sbjct: 297 KLRATFSAYGTITSSKVMRDDKGSSSKGFGFVCYSTPDEASKAVAEMHGRMVGSKPLYVA 356
Query: 386 VAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPP-GPSGLGQQFLYGQAPPAIIPPQ 444
AQRK+ RRA+L+AQ ++ + M P +YPP GP Y A ++ PQ
Sbjct: 357 FAQRKDVRRAQLEAQHTKFKSSRM-----PVQSIYPPTGP------IFYPPAGMPVVYPQ 405
Query: 445 M---PPRGHAYRYPLGRNMQ------DFPFDMGAGSMLPVPVDMGAGIPRRDAS------ 489
M PPR + P+ + Q +P G + P PR D
Sbjct: 406 MIPRPPRA-GWNGPVPQQGQYPPMQGQYPIRNPRGGVPPTGNHRNQPRPRPDGQQPAAQQ 464
Query: 490 ------VGQPMPITA-LSTALANASP-EQQRTLLGESLYPLVEQLERDAAAKVTGMLLE- 540
+ +P + ++ A + P EQQ + LGE LYPL+ + D + K+TGMLL+
Sbjct: 465 PIAQQLIAEPQAVQPEVTLATVQSMPREQQNSFLGELLYPLIHASQPDLSGKITGMLLDS 524
Query: 541 MDQTEVLHLLESPEALKAKVAEAMEVL 567
+ E+ L + E L K+ EA++VL
Sbjct: 525 LTVEELFTLYQRTELLADKIKEALDVL 551
>gi|73992493|ref|XP_534430.2| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Canis lupus
familiaris]
Length = 611
Score = 493 bits (1270), Expect = e-136, Method: Compositional matrix adjust.
Identities = 278/605 (45%), Positives = 373/605 (61%), Gaps = 65/605 (10%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
ASG F SLYVGDL +VT++ LY+ FS G +LS+RVCRD++TRRSLGY Y+N+ P
Sbjct: 3 ASGPGFPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + + IRIM+S RDP +RKSG GNIFIKNL+ SID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFEVIKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D G S+GFGFV FE E+AQ AI +NGML+ND++VFVGHF ++ERE
Sbjct: 123 GNILSCKVVCDDHG-SRGFGFVHFETHEAAQQAITTMNGMLLNDRKVFVGHFKSRREREV 181
Query: 202 V--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
A +F N++VKNL ++ L+ +F +G + S VMRD G S+ FGFVNF+
Sbjct: 182 ELGARAMEFTNIYVKNLHVDVDEQGLQDLFSRFGKMLSVKVMRDDSGHSRGFGFVNFQKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
++A KAV +NGK+ R YVG+AQK+ ER+ ELK +FEQ ++ + ++QG+NLY+KNL
Sbjct: 242 EEAQKAVMDMNGKEVSGRLLYVGRAQKRVERQSELKRRFEQLKQDRLTRYQGVNLYVKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
DSIDDEKL++ FS +G ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +
Sbjct: 302 DDSIDDEKLRKEFSPYGVITSAKVMTE-GGHSKGFGFVCFSSPEEATKAVTEMNGRILGT 360
Query: 380 KPLYVAVAQRKEERRARLQAQFSQMRPV--AMG---------------PSVP-------- 414
KPLYVA+AQRKEER+A L Q+ Q A+G PSVP
Sbjct: 361 KPLYVALAQRKEERKAILTNQYMQRLSTVRALGGPLLGSFHQPTSYFLPSVPQPPAQAAY 420
Query: 415 ----------PRMPMYPPGPS--GLGQQFLYGQAPPA----------IIPPQMPPRGHAY 452
PR PP PS + + + PPA +PP +P H
Sbjct: 421 YASGLPMQPTPRWTAPPPRPSSASVVRPPAMSRRPPAQVSSVRQASTQVPPPVP---HTQ 477
Query: 453 RYP-LGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITAL-------STALA 504
R +G G G P + P + G P + ++ LA
Sbjct: 478 RVANIGTQTTG---ASGVGYSTPGGPLLTHRYPSATHNHGVQEPAVRILGQEPLTASMLA 534
Query: 505 NASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAM 564
A +Q+ ++GE LYPL+ A K+TGMLLE+D +E+L +LESPE+L AKV EA+
Sbjct: 535 AAPLHEQKQMIGERLYPLIYNTHTQLAGKITGMLLEIDNSELLLMLESPESLNAKVEEAL 594
Query: 565 EVLRS 569
VL++
Sbjct: 595 AVLQA 599
>gi|115390925|ref|XP_001212967.1| polyadenylate-binding protein [Aspergillus terreus NIH2624]
gi|121739603|sp|Q0CR95.1|PABP_ASPTN RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|114193891|gb|EAU35591.1| polyadenylate-binding protein [Aspergillus terreus NIH2624]
Length = 753
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 293/682 (42%), Positives = 388/682 (56%), Gaps = 142/682 (20%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
S +Q + SLYVG+LD +VT++ LY+LFS +GQV S+RVCRD TRRSLGY YVNY N A
Sbjct: 41 STSQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTA 100
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
D RAL+ LN+T + K RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++FG
Sbjct: 101 DGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDTFAAFG 160
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 202
NILSCK+A D G SKG+GFV +E E+A NAI +NGML+NDK+VFVGH + K++R++
Sbjct: 161 NILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSK 220
Query: 203 --AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
+K F NV++KNLD+ ++E+ +++F ++G ITSA + RD +GKS+ FGFVN+ D
Sbjct: 221 FEEMKANFTNVYIKNLDQEISEEEFRQMFEKFGEITSATLSRDQEGKSRGFGFVNYSTHD 280
Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
A AV+ +N K+ ++ YVG+AQKK ERE+EL+ Q+E A E K+QG+NLY+KNL
Sbjct: 281 SAQAAVDEMNDKEVKGQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLT 340
Query: 321 DSIDDEKLKELFSEFGTITSCKVMRDPS-------------------------------- 348
D IDDEKL+E+F+ +GTITS KVMRD +
Sbjct: 341 DDIDDEKLREMFAPYGTITSAKVMRDTNIERTQTPDSDKEKKEESKEEKPEAAEKTEEAA 400
Query: 349 -------------------GISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQR 389
G SKG GFV FS+P+EAS+A+ EMN +MI KPLYVA+AQR
Sbjct: 401 KESGDDQDKENKKSDKKVLGKSKGFGFVCFSSPDEASKAVTEMNQRMINGKPLYVALAQR 460
Query: 390 KEERRARLQAQFSQ-------------------MRP-VAMGP------------------ 411
K+ RR++L+A M+P V GP
Sbjct: 461 KDVRRSQLEASIQARNTIRQQQAAAAAGMPQPYMQPAVFYGPGQQGFIPGGQRGGLPFAP 520
Query: 412 ------SVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPPQ---------MPPRG--HAYRY 454
VP P PGP GQQ G P IPP M P G + Y
Sbjct: 521 QPGMMMGVPGGRPGQYPGPF-PGQQGGRGMGPNQQIPPNFAQGIPMGAMGPGGIPNGMGY 579
Query: 455 PLGRNMQDFPFDMGAGSMLPVP-VDMGAG------------IPRRD-------------- 487
P M F GAG VP + MG G +P +
Sbjct: 580 P---QMGQVQFGRGAGGRGQVPGMPMGQGMRGPGYGQGRGGVPVQGQMRPGQGGRGQNAQ 636
Query: 488 --ASVGQPMPITALST-ALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQT 544
A G+ P L+ +LA A QQ+ +LGE+LYP ++ + + A K+TGMLLEMD T
Sbjct: 637 PAAGRGEEAPAAGLTAQSLAAAPAPQQKQMLGEALYPKIQAQQPELAGKITGMLLEMDNT 696
Query: 545 EVLHLLESPEALKAKVAEAMEV 566
E+L LLE EAL+AKV EA+ V
Sbjct: 697 ELLSLLEDDEALRAKVDEALSV 718
>gi|212540254|ref|XP_002150282.1| polyadenylate-binding protein [Talaromyces marneffei ATCC 18224]
gi|210067581|gb|EEA21673.1| polyadenylate-binding protein [Talaromyces marneffei ATCC 18224]
Length = 748
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 293/697 (42%), Positives = 388/697 (55%), Gaps = 150/697 (21%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
NQ + SLYVG+LD +VT++ L++LFS +GQV S+RVCRD TRRSLGY YVNY N AD
Sbjct: 45 NQPHSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADG 104
Query: 85 ARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNI 144
RAL+ LN+T + + RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++FGNI
Sbjct: 105 ERALEDLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNI 164
Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV-- 202
LSCK+A D G SKG+GFV +E E+A NAI +NGML+NDK+VFVGH + K++R++
Sbjct: 165 LSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFE 224
Query: 203 AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDA 262
+K F NV+VKN+D TDE+ +++FG++G ITSA + RD GKS+ FGFVN+ + ++A
Sbjct: 225 EMKANFTNVYVKNIDPEVTDEEFRELFGKFGDITSATISRDDSGKSRGFGFVNYVDHENA 284
Query: 263 AKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDS 322
AV+ LN K F ++ YVG+AQKK ERE+EL+ Q+E A E K+QG+NLY+KNL D
Sbjct: 285 QTAVDDLNDKDFHGQKLYVGRAQKKHEREEELRRQYEAARLEKASKYQGVNLYVKNLTDD 344
Query: 323 IDDEKLKELFSEFGTITSCKVMRDPSGI-------------------------------- 350
+DDEKL+ELFS FGTITS KVMRD G
Sbjct: 345 VDDEKLRELFSAFGTITSAKVMRDTVGAGSDSEKEETKESSEEVEEPKEEETNAKTEDED 404
Query: 351 --------------SKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRAR 396
SKG GFV FS+P+EAS+A+ EMN +M+ KPLYVA+AQRK+ R+++
Sbjct: 405 KTDAKKSDKKVFGKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKPLYVALAQRKDVRKSQ 464
Query: 397 LQAQFSQ-------------------MRP-VAMGPS----------------------VP 414
L+A M+P V GP V
Sbjct: 465 LEASIQARNTIRQQQAAAAAGMPQPYMQPAVFYGPGQQGFLPGNAGQRGMAFAPQPGMVM 524
Query: 415 PRMPMYPPG--PSGLGQQFLYGQAPPAIIP---------------PQMPPRGHAYRYPLG 457
+P PG P G QQ G A P IP P P G AY
Sbjct: 525 AGIPGGRPGQYPGGFPQQGGRGIAGPNQIPQNFGQGIPIGAMQAGPGGIPNGMAYP---- 580
Query: 458 RNMQDFPFDMGAGSMLPVPVDMGAGIP----------------------------RRDAS 489
M F GAG VP GIP ++
Sbjct: 581 -QMAQVQFGRGAGGRGQVP----QGIPPNVGGPRGGPGFGQGRGGMPPRPGPGGRGQNVP 635
Query: 490 VGQP-----MPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQT 544
G P P T AL A P+QQ+ +LGE+LYP ++ + + A K+TGMLLEMD
Sbjct: 636 AGAPAAPEGTPGTLTLQALTAAPPQQQKQMLGEALYPKIQAQQPELAGKITGMLLEMDNA 695
Query: 545 EVLHLLESPEALKAKVAEAMEVLRSVAQQQANN-PAD 580
E+L L++ AL+AKV EA+ V + + ++ PAD
Sbjct: 696 ELLGLIDDESALRAKVDEALHVYDEYMKNKGSDEPAD 732
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 96/300 (32%), Positives = 158/300 (52%), Gaps = 21/300 (7%)
Query: 110 PSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENK 168
P+ + + ++++ LD S+ L + FSS G + S ++ D + +S G+ +V + N
Sbjct: 42 PNPNQPHSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNT 101
Query: 169 ESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKI 228
+ A++ LN LI + + +R+ KT NVF+KNLD + ++ L
Sbjct: 102 ADGERALEDLNYTLIKGRPCRI----MWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDT 157
Query: 229 FGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKS 288
F +G I S V +D G SK +GFV++E A+ A A++ +NG +D++ +VG K
Sbjct: 158 FAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKK 217
Query: 289 ERE---QELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMR 345
+R+ +E+K F N+Y+KN+ + DE+ +ELF +FG ITS + R
Sbjct: 218 DRQSKFEEMKANF-------------TNVYVKNIDPEVTDEEFRELFGKFGDITSATISR 264
Query: 346 DPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
D SG S+G GFV + E A A+ ++N K + LYV AQ+K ER L+ Q+ R
Sbjct: 265 DDSGKSRGFGFVNYVDHENAQTAVDDLNDKDFHGQKLYVGRAQKKHEREEELRRQYEAAR 324
>gi|281345572|gb|EFB21156.1| hypothetical protein PANDA_005635 [Ailuropoda melanoleuca]
Length = 605
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 281/602 (46%), Positives = 378/602 (62%), Gaps = 58/602 (9%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
ASG + SLYVGDL +VT++ LY+ FS G +LS+RVCRD++TRRSLGY Y+N+ P
Sbjct: 3 ASGPGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + + +RIM+S RDP +RKSG GNIFIKNL+ SID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFEVIKGQPVRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D G S+GFGFV FE E+A AI +NGML+ND++VFVGHF ++ERE
Sbjct: 123 GNILSCKVVCDDHG-SRGFGFVHFETHEAAHQAIATMNGMLLNDRKVFVGHFKSRREREA 181
Query: 202 V--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
A +F N++VKNL ++ L+ +F ++G + S VMRD G S+ FGFVNFE
Sbjct: 182 ELGARAMEFTNIYVKNLHVDVDEQGLQDLFSQFGKMLSVKVMRDDIGHSRGFGFVNFEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
++A KAV +NGK+ R YVG+AQK+ ER+ ELK +FEQ ++ ++QG+NLY+KNL
Sbjct: 242 EEAQKAVMDMNGKEVSGRLLYVGRAQKRVERQNELKRRFEQMKQDRATRYQGVNLYVKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
DSIDDEKL++ FS +G ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +
Sbjct: 302 DDSIDDEKLRKEFSPYGVITSAKVMTE-GGHSKGFGFVCFSSPEEATKAVTEMNGRIVGT 360
Query: 380 KPLYVAVAQRKEERRARLQAQFSQMRPV--AMG---------------PSVP-------- 414
KPLYVA+AQRKEER+A L Q+ Q A+G P+VP
Sbjct: 361 KPLYVALAQRKEERKAILTNQYMQRLSTVRALGGPLLGSFQQPASYFLPAVPQPPAQAAY 420
Query: 415 -PRMPMYPPGPSGLGQQFLYGQA----PPAII--PP-----------QMPPRG-HAYRYP 455
P P P Q A PPA++ PP Q+PP G H R
Sbjct: 421 YASSPSVQPAPRWTAQPPRVSSASMVRPPAMLRRPPAQVNSVRQASTQVPPPGPHTQRVA 480
Query: 456 -LGRNM---QDFPFDMGAGSMLPVPVDMGAGIP-RRDASVGQP--MPITALSTALANASP 508
+G + G +L A P R+++V P P+TA + LA A
Sbjct: 481 NIGTQTTGASGVGYSTPTGPVLTHKYSSAAHNPGVRESAVCIPGQEPLTA--SMLAAAPL 538
Query: 509 EQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVA-EAMEVL 567
+Q+ ++GE LYPL+ A K+TGMLLE+D +E+L +LESPE+L AKV EA+ VL
Sbjct: 539 HEQKQMIGERLYPLIYDTHTQLAGKITGMLLEIDNSELLLMLESPESLNAKVVEEALAVL 598
Query: 568 RS 569
++
Sbjct: 599 QA 600
>gi|193592023|ref|XP_001950415.1| PREDICTED: polyadenylate-binding protein 1-like [Acyrthosiphon
pisum]
Length = 630
Score = 490 bits (1261), Expect = e-136, Method: Compositional matrix adjust.
Identities = 290/623 (46%), Positives = 397/623 (63%), Gaps = 80/623 (12%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL +VT++ L++ FS VG V+SVRVCRD TRRSLGY YVN+ N ADA ALD
Sbjct: 3 SLYVGDLHSDVTEAMLFEKFSAVGVVVSVRVCRDNITRRSLGYAYVNFQNMADAECALDT 62
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF LN +RIM+S RDPS+RKSG GN+FIKNLDK+ID+KA++DTFS+FGNILSCK+A
Sbjct: 63 MNFEILNGCPMRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVA 122
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET-VAIKTK-F 208
D +GQSKG+GFV F+ ++SA +I+K+NGML+N K+VFVG F+ +++RE + K K F
Sbjct: 123 QDETGQSKGYGFVHFDMEQSATQSIEKVNGMLLNGKKVFVGRFVGRKDREKELGQKAKLF 182
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NV++KN+DE+ D++L ++F +YG+ITS VM DG S+ FGFV FE+ +A KAV
Sbjct: 183 TNVYIKNIDENVNDKELFEMFEKYGSITSCKVMFKDDGSSRGFGFVAFEDPKEAEKAVSE 242
Query: 269 LNGKKF-DDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEK 327
L+GK+ + + +YVG+AQKK+ER+ ELK +FEQ E ++++QG+NLY+KNL D+IDDE
Sbjct: 243 LHGKESPEGKTYYVGRAQKKAERQNELKRKFEQYKIERMNRYQGINLYVKNLDDTIDDEH 302
Query: 328 LKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 387
L+ FS FGTITS KVM D G SKG GFV FS+PEEA++A+ EMN +++ +KPLYVA+A
Sbjct: 303 LRREFSVFGTITSAKVMMD-DGRSKGFGFVCFSSPEEATKAVTEMNNRIVGTKPLYVALA 361
Query: 388 QRKEERRARLQAQFSQ----MRPVAMGPSVPPR------MPMYPP-----GPSGLGQ--- 429
QRKEER+A L AQ+ Q MR ++GP P +P P GP+ + Q
Sbjct: 362 QRKEERKAHLNAQYLQSNTNMRMQSIGPIYQPGASSGYFVPTIPQGQRFYGPAQMTQIRP 421
Query: 430 QFLYGQAPPA-IIPPQMPPRGH---AYRY----------------------------PLG 457
Q + P I PQ GH A +Y P+
Sbjct: 422 QPRWASQPQVRIATPQNAAAGHPNMATQYRNIGARAPVPAGQQAAFTGNSMVNRNSRPIS 481
Query: 458 RNMQDFPFDMGAGSM-LPVPVDMGAGI---------PRRDASVGQ------PMPITA--- 498
Q P + AGS+ +P G+G P +GQ P P+ A
Sbjct: 482 TAQQQIPGAVSAGSVRVPSARSSGSGYKYTANMRNPPGEAQGMGQAQPRQPPAPVQAALH 541
Query: 499 -------LSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLE 551
++ LA+A PE Q+ +LGE L+PL++++ K+TGMLLE+D +EVLH+LE
Sbjct: 542 VHGQEPLTASMLASAKPEDQKQMLGERLFPLIQRIYPKFTGKITGMLLEIDNSEVLHMLE 601
Query: 552 SPEALKAKVAEAMEVLRSVAQQQ 574
E+LK KV EA+ V+++ QQ
Sbjct: 602 HQESLKIKVQEAVAVIQAHQTQQ 624
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
N++ +LYV +LD + D L FS G + S +V D RS G+G+V +++P +A
Sbjct: 282 NRYQGINLYVKNLDDTIDDEHLRREFSVFGTITSAKVMMDDG--RSKGFGFVCFSSPEEA 339
Query: 85 ARALDVLNFTPLNNKSIRIMYSHR 108
+A+ +N + K + + + R
Sbjct: 340 TKAVTEMNNRIVGTKPLYVALAQR 363
>gi|348563863|ref|XP_003467726.1| PREDICTED: polyadenylate-binding protein 1-like [Cavia porcellus]
Length = 613
Score = 489 bits (1260), Expect = e-135, Method: Compositional matrix adjust.
Identities = 274/604 (45%), Positives = 377/604 (62%), Gaps = 61/604 (10%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A G + +SLYVGDL +VT++ LY+ FS VG +LS+RVCRD++TRRSLGY Y+N+ P
Sbjct: 3 AGGQGYPLSSLYVGDLHPDVTEAMLYETFSPVGPILSIRVCRDVATRRSLGYAYINFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + + IRIM+S RDP +RKSG GN+FIKNL+ SID KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFEVIKGQPIRIMWSQRDPGLRKSGVGNVFIKNLEDSIDSKALYDTFSTF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+A D G S+GFGFV FE E+AQ AI +NGML+ND++VFVGHF ++ERE
Sbjct: 123 GNILSCKVACDEHG-SRGFGFVHFETNEAAQQAIGTMNGMLLNDRKVFVGHFKSQREREA 181
Query: 202 V--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
A +F N++VKNL ++ L+ +F +G + S VMRD G S+ FGFVNFE
Sbjct: 182 ELGAQALEFTNIYVKNLSVDMDEQGLQDLFFAFGNMLSVKVMRDNSGHSRGFGFVNFEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
++A KAV+ +NGK+ ++ YVG+AQK++ER+ ELK +FEQ ++ +++G+NLY+KNL
Sbjct: 242 EEAQKAVDHMNGKEVSGQQLYVGRAQKRAERQNELKRRFEQLKQDRQTRYRGVNLYVKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
DSI DEKL+ +FS +G ITS KVM + SKG GFV FS+PEEA++A+ EMNG ++ +
Sbjct: 302 DDSISDEKLRTVFSPYGVITSAKVMTE-GDHSKGFGFVCFSSPEEATKAVTEMNGCIVGT 360
Query: 380 KPLYVAVAQRKEERRARLQAQFSQM--------RPVAMGPSVPPRMPMYPPGPSGLGQQF 431
KPLYVA+AQRKEER+A L Q+ + RPV +G P P G Q
Sbjct: 361 KPLYVALAQRKEERKAILTNQYMKRLSTVQALSRPV-LGSFQQPNSYFLPTGAQPPAQAP 419
Query: 432 LYGQ----AP--PA---------------IIPPQMPPRGHAYRYPLGRNMQDFPF----- 465
G AP PA + PP +P R A + + P
Sbjct: 420 CCGSSGSVAPVQPAPRWTAQPQRPSTASVVRPPGLPRRPQANVSSVRQASTQVPHLAPHT 479
Query: 466 ---------DMGAG-------SMLPV----PVDMGAGIPRRDASVGQPMPITALSTALAN 505
MG S+LP V + G+P V P+TA + LA
Sbjct: 480 KKVANIGTQTMGRAACSTEGPSLLPCTCSSTVHIAHGVPEPAVHVPGQEPLTA--SMLAA 537
Query: 506 ASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAME 565
A +Q+ ++GE LY L+ ++ A K+TGMLLE+D +++L +LESPE+L+AK+ EA+
Sbjct: 538 APLHEQKQMIGERLYHLIPEVYASLAGKITGMLLEIDNSDLLLMLESPESLQAKIEEAVA 597
Query: 566 VLRS 569
VL++
Sbjct: 598 VLQA 601
>gi|384496545|gb|EIE87036.1| hypothetical protein RO3G_11747 [Rhizopus delemar RA 99-880]
Length = 616
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 240/427 (56%), Positives = 314/427 (73%), Gaps = 7/427 (1%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVG+LD +VT++ L+++F+ +G V S+RVCRD TRRSLGY YVN+ N D RAL
Sbjct: 38 SASLYVGELDPSVTEAMLFEMFNMIGPVASIRVCRDAVTRRSLGYAYVNFHNIVDGERAL 97
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LN+T + K RIM+S RDPS+RK+G+GN+FIKNLD SID+KALHDTFS+FGNILSCK
Sbjct: 98 ESLNYTLIKGKPCRIMWSQRDPSLRKTGSGNVFIKNLDTSIDNKALHDTFSAFGNILSCK 157
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVA--IKT 206
IA D SG SKG+GFV +E +E+A NAI ++GML+NDK+V+VG + ++ER+ I+
Sbjct: 158 IALDESGNSKGYGFVHYETEEAADNAIKHVDGMLLNDKKVYVGRHIPRKERQAKIEQIRA 217
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
KF NV+VKNLDES DE K++F ++G ITSA+V D +GKSK FGF+NFEN +DA KAV
Sbjct: 218 KFTNVYVKNLDESINDEQFKEMFSKFGPITSALVQTDEEGKSKGFGFINFENYEDAHKAV 277
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
+ LN + + + YV +AQKK+ERE+EL+ Q+EQA E + K+QG+NLYIKNL D IDDE
Sbjct: 278 DTLNETEHNGKTLYVARAQKKTEREEELRKQYEQAKLEKLAKYQGVNLYIKNLDDDIDDE 337
Query: 327 KLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 386
KL++ FS +G ITS KVM D G SKG GFV FS+P+EA++A+ EMNG+MI SKP+YVA+
Sbjct: 338 KLRQEFSVYGVITSAKVMCDEKGTSKGFGFVCFSSPDEATKAVTEMNGRMIGSKPIYVAL 397
Query: 387 AQRKEERRARLQAQFSQMRPVAMGPSVP-PRMPMYPPGPSGL----GQQFLYGQAPPAII 441
AQRKE RR++L+AQ +Q + M +P P P Y PG GQ GQ P
Sbjct: 398 AQRKEVRRSQLEAQMAQRNQMRMQQGMPMPGAPGYMPGAPMFYAPPGQFMPQGQRPTVFA 457
Query: 442 PPQMPPR 448
P M PR
Sbjct: 458 PNNMMPR 464
>gi|1616770|gb|AAB16848.1| putative poly(A)-binding protein FabM [Emericella nidulans]
Length = 705
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 281/669 (42%), Positives = 375/669 (56%), Gaps = 149/669 (22%)
Query: 18 VAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVN 77
V A A+ +Q + SLYVG+LD +VT++ LY+LFS +GQV S+RVCRD TRRSLGY YVN
Sbjct: 30 VEAPATTSQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVN 89
Query: 78 YANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDT 137
Y + A RALD LN+T + K RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDT
Sbjct: 90 YNDTAHGERALDELNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDT 149
Query: 138 FSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQ 197
F++FGNILSCK+A D G SKG+GFV +E E+A NAI +NGML+NDK+VFVGH + K+
Sbjct: 150 FAAFGNILSCKVAQDEFGVSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKK 209
Query: 198 ERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVN 255
+R++ +K F N+++KN+D DE+ +K+F ++G ITSA + RD +GKS+ FGFVN
Sbjct: 210 DRQSKFEEMKANFTNIYIKNIDPEVEDEEFRKLFEKFGEITSATLSRDSEGKSRGFGFVN 269
Query: 256 FENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLY 315
F + A AVE +N K+ ++ YVG+AQKK ERE+EL+ Q+E A E K+QG+NLY
Sbjct: 270 FSTHESAQAAVEEMNDKEVRSQKLYVGRAQKKHEREEELRKQYEAARMEKASKYQGVNLY 329
Query: 316 IKNLGDSIDDEKLKELFSEFGTITSCKVMRD----------------------------- 346
+KNL D +DD+KL+ELF +GTITS KVMRD
Sbjct: 330 VKNLTDDVDDDKLRELFGPYGTITSAKVMRDTAPVETATPESETKESANKENEKAAEGEK 389
Query: 347 ----------------------PSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYV 384
P G SKG GFV FS+P+EAS+A+ EMN +M+ KPLYV
Sbjct: 390 EPAAEEKEKEEEKEAEQKPEKKPLGKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKPLYV 449
Query: 385 AVAQRKEERRARLQAQFSQMRPVA--------------MGPSVPPRMPMYPPGPSGLGQQ 430
A+AQRK+ RR++L+A + M P+V Y PG G
Sbjct: 450 ALAQRKDVRRSQLEASIQARNNIRQQQAAAAAGMGQAYMAPAV-----FYGPGQQG---- 500
Query: 431 FLYGQAPPAIIPPQ------MPPRGHAYRYP---------LGRNMQDFPFDMGAGSMLPV 475
F+ G + PPQ MP R Y P +G N Q P G LP+
Sbjct: 501 FIPGAQRGGMFPPQPGMMMGMPGRPGQYPGPFPGQQGGRGVGPNQQIPPNFQG----LPM 556
Query: 476 PVDMGAGIPR-------------------------------------------------- 485
G GIP
Sbjct: 557 GAMQGPGIPNGMGYPMVQGQFGGGRGRGQVPGMGGPMRGGYGGGRGGVPLGGQMRPGQGG 616
Query: 486 RDASVGQPMPITAL----STALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEM 541
R +VGQP P T + + AL+ A P+QQ+ +LGE+LYP ++ + + A K+TGMLLEM
Sbjct: 617 RGQAVGQPGPETPVGVLTAQALSAAPPQQQKQMLGEALYPKIQATQPELAGKITGMLLEM 676
Query: 542 DQTEVLHLL 550
D TE+L LL
Sbjct: 677 DNTELLGLL 685
>gi|327285428|ref|XP_003227435.1| PREDICTED: polyadenylate-binding protein 4-like [Anolis
carolinensis]
Length = 616
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 274/581 (47%), Positives = 365/581 (62%), Gaps = 73/581 (12%)
Query: 56 VLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKS 115
VLS+RVCRD+ TRRSL Y YVN+ PADA RALD +NF + K IRIM+S RDPS+RKS
Sbjct: 24 VLSIRVCRDMITRRSLFYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKS 83
Query: 116 GTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAI 175
G GN+FIKNLDKSID+KAL+DTFS+FGNILSCK+ D +G SKG+ FV FE +++A AI
Sbjct: 84 GVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQDAADRAI 142
Query: 176 DKLNGMLINDKQVFVGHFLRKQERET-VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYG 233
+K+NGML+ND++VFVG F ++ERE + K K F NV++KN + DE LK++FG+YG
Sbjct: 143 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMDDERLKELFGKYG 202
Query: 234 TITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQE 293
S VM D GKSK FGFV+FE ++A KAVE +NGK + + +VG+AQKK ER+ E
Sbjct: 203 KTLSVKVMTDPTGKSKGFGFVSFEKHEEANKAVEEMNGKDINGKMVFVGRAQKKVERQAE 262
Query: 294 LKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKG 353
LK +FEQ +E + ++QG+NLYIKNL D+IDDEKL++ FS FG+ITS KVM + G SKG
Sbjct: 263 LKRRFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE-EGRSKG 321
Query: 354 SGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQF------------ 401
GFV FS+PEEA++A+ EMNG+++ SKPLYVA+AQRKEER+A L Q+
Sbjct: 322 FGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAHLTNQYMQRIAGMRALPA 381
Query: 402 ----SQMRPVAMG---PSVP---PRMPMYPP----------------------------- 422
+Q +P A G P+VP R P Y P
Sbjct: 382 NAILNQFQPAAGGYFMPAVPQAQSRPPYYAPNQMTQIRPNPRWQQGGRPQGFQGMPNMRQ 441
Query: 423 ----------GPSGLGQ--QFLYGQAPPAIIPPQMPPRGHAYRYPLGRNMQDF--PFDMG 468
P+G Q + L G IPP P A R P + P+
Sbjct: 442 SGPRPNLRHLAPAGNAQASRGLPGAPQRVGIPPTGP--NLAPRPPAAAQVPRAVPPYKYA 499
Query: 469 AGSMLPVPVDMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLER 528
+ P P P+ V P+TA + LA A P++Q+ +LGE L+PL++ +
Sbjct: 500 SSVRSPHPAVQPLQAPQPAVHVQGQEPLTA--SMLAAAPPQEQKQMLGERLFPLIQAMHL 557
Query: 529 DAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRS 569
A K+TGMLLE+D +E+LH+LESPE+L++KV EA+ VL++
Sbjct: 558 SLAGKITGMLLEIDNSELLHMLESPESLRSKVEEAVAVLQA 598
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 105/289 (36%), Positives = 165/289 (57%), Gaps = 23/289 (7%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ +LD ++ + LYD FS G +LS +V D + S GY +V++ A RA++
Sbjct: 87 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYAFVHFETQDAADRAIEK 144
Query: 91 LNFTPLNNKSIRI-MYSHRDPSIRKSGT-----GNIFIKNLDKSIDHKALHDTFSSFGNI 144
+N LN++ + + + R + G N++IKN +D + L + F +G
Sbjct: 145 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMDDERLKELFGKYGKT 204
Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAI 204
LS K+ TD +G+SKGFGFV FE E A A++++NG IN K VFVG +K ER+ +
Sbjct: 205 LSVKVMTDPTGKSKGFGFVSFEKHEEANKAVEEMNGKDINGKMVFVGRAQKKVERQA-EL 263
Query: 205 KTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCF 251
K +F N+++KNLD++ DE L+K F +G+ITSA VM + +G+SK F
Sbjct: 264 KRRFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE-EGRSKGF 322
Query: 252 GFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQ 300
GFV F + ++A KAV +NG+ + YV AQ+K ER+ L Q+ Q
Sbjct: 323 GFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAHLTNQYMQ 371
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 107/197 (54%), Gaps = 20/197 (10%)
Query: 21 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYAN 80
GA +F T++Y+ + ++ D +L +LF + G+ LSV+V D T +S G+G+V++
Sbjct: 171 GAKAKEF--TNVYIKNFGDDMDDERLKELFGKYGKTLSVKVMTD-PTGKSKGFGFVSFEK 227
Query: 81 PADAARALDVLNFTPLNNKSI----------------RIMYSHRDPSIRKSGTGNIFIKN 124
+A +A++ +N +N K + R + I + N++IKN
Sbjct: 228 HEEANKAVEEMNGKDINGKMVFVGRAQKKVERQAELKRRFEQLKQERISRYQGVNLYIKN 287
Query: 125 LDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLIN 184
LD +ID + L FS FG+I S K+ + G+SKGFGFV F + E A A+ ++NG ++
Sbjct: 288 LDDTIDDEKLRKEFSPFGSITSAKVMLE-EGRSKGFGFVCFSSPEEATKAVTEMNGRIVG 346
Query: 185 DKQVFVGHFLRKQERET 201
K ++V RK+ER+
Sbjct: 347 SKPLYVALAQRKEERKA 363
>gi|67527154|ref|XP_661604.1| hypothetical protein AN4000.2 [Aspergillus nidulans FGSC A4]
gi|40740281|gb|EAA59471.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4]
Length = 711
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 280/668 (41%), Positives = 374/668 (55%), Gaps = 149/668 (22%)
Query: 18 VAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVN 77
V A A+ +Q + SLYVG+LD +VT++ LY+LFS +GQV S+RVCRD TRRSLGY YVN
Sbjct: 30 VEAPATTSQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVN 89
Query: 78 YANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDT 137
Y + A RALD LN+T + K RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDT
Sbjct: 90 YNDTAHGERALDELNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDT 149
Query: 138 FSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQ 197
F++FGNILSCK+A D G SKG+GFV +E E+A NAI +NGML+NDK+VFVGH + K+
Sbjct: 150 FAAFGNILSCKVAQDEFGVSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKK 209
Query: 198 ERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVN 255
+R++ +K F N+++KN+D DE+ +K+F ++G ITSA + RD +GKS+ FGFVN
Sbjct: 210 DRQSKFEEMKANFTNIYIKNIDPEVEDEEFRKLFEKFGEITSATLSRDSEGKSRGFGFVN 269
Query: 256 FENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLY 315
F + A AVE +N K+ ++ YVG+AQKK ERE+EL+ Q+E A E K+QG+NLY
Sbjct: 270 FSTHESAQAAVEEMNDKEVRSQKLYVGRAQKKHEREEELRKQYEAARMEKASKYQGVNLY 329
Query: 316 IKNLGDSIDDEKLKELFSEFGTITSCKVMRD----------------------------- 346
+KNL D +DD+KL+ELF +GTITS KVMRD
Sbjct: 330 VKNLTDDVDDDKLRELFGPYGTITSAKVMRDTAPVETATPESETKESANKENEKAAEGEK 389
Query: 347 ----------------------PSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYV 384
P G SKG GFV FS+P+EAS+A+ EMN +M+ KPLYV
Sbjct: 390 EPAAEEKEKEEKKEAEQKPEKKPLGKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKPLYV 449
Query: 385 AVAQRKEERRARLQAQFSQMRPVA--------------MGPSVPPRMPMYPPGPSGLGQQ 430
A+AQRK+ RR++L+A + M P+V Y PG G
Sbjct: 450 ALAQRKDVRRSQLEASIQARNNIRQQQAAAAAGMGQAYMAPAV-----FYGPGQQG---- 500
Query: 431 FLYGQAPPAIIPPQ------MPPRGHAYRYP---------LGRNMQDFPFDMGAGSMLPV 475
F+ G + PPQ MP R Y P +G N Q P G LP+
Sbjct: 501 FIPGAQRGGMFPPQPGMMMGMPGRPGQYPGPFPGQQGGRGVGPNQQIPPNFQG----LPM 556
Query: 476 PVDMGAGIPR-------------------------------------------------- 485
G GIP
Sbjct: 557 GAMQGPGIPNGMGYPMVQGQFGGGRGRGQVPGMGGPMRGGYGGGRGGVPLGGQMRPGQGG 616
Query: 486 RDASVGQPMPITAL----STALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEM 541
R +VGQP P T + + AL+ A P+QQ+ +LGE+LYP ++ + + A K+TGMLLEM
Sbjct: 617 RGQAVGQPGPETPVGVLTAQALSAAPPQQQKQMLGEALYPKIQATQPELAGKITGMLLEM 676
Query: 542 DQTEVLHL 549
D TE+L L
Sbjct: 677 DNTELLGL 684
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 105/318 (33%), Positives = 169/318 (53%), Gaps = 21/318 (6%)
Query: 92 NFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIAT 151
N TP N + + + + + ++++ LD S+ L++ FSS G + S ++
Sbjct: 16 NGTPDNAPAPEVTAVEAPATTSQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCR 75
Query: 152 DG-SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNN 210
D + +S G+ +V + + + A+D+LN LI K + +R+ KT N
Sbjct: 76 DAVTRRSLGYAYVNYNDTAHGERALDELNYTLIKGKPCRI----MWSQRDPALRKTGQGN 131
Query: 211 VFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALN 270
VF+KNLD + ++ L F +G I S V +D G SK +GFV++E A+ A A++ +N
Sbjct: 132 VFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGVSKGYGFVHYETAEAANNAIKHVN 191
Query: 271 GKKFDDREWYVGKAQKKSERE---QELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEK 327
G +D++ +VG K +R+ +E+K F N+YIKN+ ++DE+
Sbjct: 192 GMLLNDKKVFVGHHISKKDRQSKFEEMKANF-------------TNIYIKNIDPEVEDEE 238
Query: 328 LKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 387
++LF +FG ITS + RD G S+G GFV FST E A A+ EMN K + S+ LYV A
Sbjct: 239 FRKLFEKFGEITSATLSRDSEGKSRGFGFVNFSTHESAQAAVEEMNDKEVRSQKLYVGRA 298
Query: 388 QRKEERRARLQAQFSQMR 405
Q+K ER L+ Q+ R
Sbjct: 299 QKKHEREEELRKQYEAAR 316
>gi|392574075|gb|EIW67212.1| hypothetical protein TREMEDRAFT_40410 [Tremella mesenterica DSM
1558]
Length = 666
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 277/632 (43%), Positives = 384/632 (60%), Gaps = 71/632 (11%)
Query: 12 MSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSL 71
+S P+ AG G SLYVG+LD +VT++ L+++F+ +G V S+RVCRD TRRSL
Sbjct: 25 ISPPSSTQAGPGGT---GASLYVGELDPSVTEAMLFEIFNIIGPVASIRVCRDAVTRRSL 81
Query: 72 GYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDH 131
GY YVNY N AD RAL+ LN++ + + RIM+S RDP++RK+G GNIFIKNLD+SID+
Sbjct: 82 GYAYVNYLNAADGERALEHLNYSAIKGRPCRIMWSQRDPALRKTGQGNIFIKNLDESIDN 141
Query: 132 KALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVG 191
KALHDTF++FG ILSCK+ D G+S+GF FV ++ E+A AI ++GM++NDK+VFVG
Sbjct: 142 KALHDTFAAFGEILSCKVGVDEDGKSRGFAFVHYQTGEAADAAIKGVDGMMLNDKKVFVG 201
Query: 192 HFLRKQERETVA--IKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSK 249
H + K+ER++ A + F NVFVKN+D S T+++ + + ++G S + D +GKSK
Sbjct: 202 HHIGKKERQSKAEEQRAHFTNVFVKNVDLSVTEKEFEDLVSKFGETVSIALSLDEEGKSK 261
Query: 250 CFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKF 309
FGFVN+ + + A KAV+ LN K+ + ++ + G+AQK+ ER+ EL+ E+ +E K
Sbjct: 262 GFGFVNYVSHEAAEKAVDELNDKEVNGQKLWAGRAQKRVERDTELRKTIEEKRQEFDAKS 321
Query: 310 QGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRAL 369
G+NLY+KNL D DD++L+ F FGTITSCKVM+D G+S+ GFV +S+PEEA++A+
Sbjct: 322 AGVNLYVKNLDDEWDDDRLRAEFDSFGTITSCKVMKDERGVSRNFGFVCYSSPEEATKAV 381
Query: 370 AEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPM---------Y 420
+EMNGKMI SKPLYVA+AQR+E RR L++Q +Q R P P MP Y
Sbjct: 382 SEMNGKMIGSKPLYVALAQRREARRQALESQIAQ-RTNQRVPYAPGGMPQGYMNQPMYGY 440
Query: 421 PPGPSGLGQ--------------QFL-----YGQAP--------------------PAII 441
PP P G GQ Q + Y AP P I
Sbjct: 441 PPMP-GYGQPGMMPMRPMMGYNPQMMQQRPRYPPAPMNQPGMGMPPMPYGMPPQQMPYAI 499
Query: 442 PPQMP----PRGHAYRYPL-------GRNMQDFPFDMGAGSMLP--VPVDMGAGIPRRDA 488
PP P P G + R P GR + P +G S LP +P M P D
Sbjct: 500 PPNYPVRPGPGGISARPPTSAPAPAQGR-INGGPSPVGYSSGLPGSMPRQMPMARPGYDQ 558
Query: 489 SVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLH 548
QP + ALA A +Q+ +LGE+LYPL+ + + A K+TGMLLEMD +E+LH
Sbjct: 559 V--QPQQNKLSAQALARAPLAEQKQMLGEALYPLIGATQPELAGKITGMLLEMDNSELLH 616
Query: 549 LLESPEALKAKVAEAMEVLRSVAQQQANNPAD 580
L+ESP AL KV EA++VL ++ + D
Sbjct: 617 LIESPPALLEKVDEALKVLEEWGKEGGHADGD 648
>gi|118100597|ref|XP_417367.2| PREDICTED: embryonic polyadenylate-binding protein-like [Gallus
gallus]
Length = 632
Score = 483 bits (1242), Expect = e-133, Method: Compositional matrix adjust.
Identities = 279/630 (44%), Positives = 389/630 (61%), Gaps = 83/630 (13%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
ASG + SLYVGDL +VT++ LY+ FS G +LS+RVCRD+++RRSLGY Y+N+ P
Sbjct: 3 ASGPGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVASRRSLGYAYINFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + + +RIM+S RDP +RKSG GN+FIKNLD SID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFEVIKGRPVRIMWSQRDPGLRKSGVGNVFIKNLDDSIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G S+G GFV FE +E+A AI +NGML+ND++VFVGHF ++ERE
Sbjct: 123 GNILSCKVVCDENG-SRGHGFVHFETQEAATRAIQTMNGMLLNDRKVFVGHFKSRKEREA 181
Query: 202 V--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
A +F NV++KN + D L++IF +G S VM D G+SK FGFVNFE
Sbjct: 182 EFGARAMEFTNVYIKNFGDDMDDNRLREIFSRFGKTLSVKVMMDHTGRSKGFGFVNFEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
++A KAV +NGK+ + R YVG+AQK+ ER+ ELK +FEQ +E V ++QG+NLY+KNL
Sbjct: 242 EEAQKAVADMNGKEINGRMVYVGRAQKRLERQSELKRKFEQMKQERVSRYQGVNLYVKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D IDDE+L++ FS +GTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +
Sbjct: 302 DDGIDDERLRKEFSPYGTITSAKVMTE-GGHSKGFGFVCFSSPEEATKAVTEMNGRIVST 360
Query: 380 KPLYVAVAQRKEERRARLQAQFSQ----MRPVA---MGPSVPPRMPMYPPGPSGLGQQFL 432
KPLYVA+AQRKEER+A L Q+ Q MR + +G PP PP P +
Sbjct: 361 KPLYVALAQRKEERKAILTNQYMQRLATMRALPGPFLGSFQPPPGYFLPPIPQPQTRAAF 420
Query: 433 YGQAP--------------------PAIIP-------------------------PQMPP 447
Y +P PA P P++PP
Sbjct: 421 YSPSPVVPVRPATRWSAQPTRPPPYPAATPILRAAVQPRRLLSNISTMRQASTQVPRVPP 480
Query: 448 RGH----------AYRYPLGRNMQDFP---FDMGAGSMLPVPVDMGAGIPRRDASVGQPM 494
+ + R P ++ P + + ++ P MG+ +P VG+P
Sbjct: 481 QAQRVANIGTQTISARVPSSPTLRGAPQYKYSLAVRNIQP----MGS-VPPGAQQVGEPA 535
Query: 495 -------PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVL 547
P+TA + LA A P++Q+ ++GE LYPL+ + A K+TGMLLE+D +E+L
Sbjct: 536 VHIQGQEPLTA--SMLAAAPPQEQKQMIGERLYPLIHAMHASLAGKITGMLLEIDNSELL 593
Query: 548 HLLESPEALKAKVAEAMEVLRSVAQQQANN 577
LLESPE+L +K+ EA+ VL++ +A++
Sbjct: 594 LLLESPESLHSKIEEAVAVLQAHQATEASH 623
>gi|388854914|emb|CCF51417.1| probable PAB1-mRNA polyadenylate-binding protein [Ustilago hordei]
Length = 648
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 282/600 (47%), Positives = 391/600 (65%), Gaps = 65/600 (10%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
TSLYVG+LD +VT++ L+++F+ +G V S+RVCRD TRRSLGY YVN+ N AD RA++
Sbjct: 45 TSLYVGELDPSVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNFLNAADGERAME 104
Query: 90 VLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKI 149
LN++ + N+ RIM+S RDP++R++G GNIFIKNLD ID+KALHDTF++FGNILSCK+
Sbjct: 105 QLNYSLIRNRPCRIMWSQRDPALRRTGQGNIFIKNLDAGIDNKALHDTFAAFGNILSCKV 164
Query: 150 ATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTK 207
AT+ +G S G+GFV +E E+A+ AI +NGML+NDK+V+VGH + ++ER+ + K
Sbjct: 165 ATNDTG-SLGYGFVHYETAEAAEAAIKHVNGMLLNDKKVYVGHHIPRKERQAKIEESRAK 223
Query: 208 FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVE 267
F NV+ KN+D TDE +K+F YG ITS V+ RD DGKSK FGFVNFE+ ++A KAV+
Sbjct: 224 FTNVYCKNVDPEVTDEQFEKLFTNYGKITSCVLQRDDDGKSKGFGFVNFEDHEEAQKAVD 283
Query: 268 ALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEK 327
L+ F ++ +V +AQKKSERE+EL+ +E A E + KFQG+NLY+KN+ +S DDE+
Sbjct: 284 ELHDSDFHGQKLFVARAQKKSEREEELRRSYEAAKNEKLAKFQGVNLYLKNIPESYDDER 343
Query: 328 LKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 387
L+E F+ FGTITSCK+MR PSG+S+G GFV +S PEEA++A++EMNGKM+ ++PLYVA+A
Sbjct: 344 LREEFAPFGTITSCKIMRAPSGVSRGFGFVCYSVPEEANKAVSEMNGKMLDNRPLYVALA 403
Query: 388 QRKEERRARLQAQF-------SQMRPVAMGPSVP------PRMPMYPPGPSGLGQQFLYG 434
QRK+ RR +L+AQ Q + A G P P+ +P P G+ + Y
Sbjct: 404 QRKDVRRQQLEAQIMQRNQLRLQQQAAAQGMGYPGPGMYYPQPGAFPGQPGGMVPRPRY- 462
Query: 435 QAPPAIIPPQMP--PRGHAYRYPLGRNMQDF----------------------------- 463
AP ++P MP P G ++P G Q +
Sbjct: 463 -APAGMMPQGMPMAPYGQPGQFPAGMMPQGYRPARPPRGAPNAAGGPAPPAGARPPAGVN 521
Query: 464 --PFDMGAGSMLPVPVDMGAGIPRRDAS--VGQP-----MPITALSTALANASPEQQRTL 514
P G PVP G +PR + G+P P T + ALA ASPE+Q+ +
Sbjct: 522 GAPRPAGQ----PVP---GQPMPRGPGARPAGRPQEVAGQPGTLTAAALAKASPEEQKQM 574
Query: 515 LGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQ 574
LGE++YP V + + A K+TGM+LE+ TE+LHLLE EAL AKV EA+EVL+ Q +
Sbjct: 575 LGEAIYPKVAASQPELAGKLTGMILELPVTELLHLLEEQEALDAKVNEALEVLKEYQQNE 634
>gi|173421|gb|AAA35320.1| poly(A)-binding protein, partial [Schizosaccharomyces pombe]
Length = 628
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 265/578 (45%), Positives = 370/578 (64%), Gaps = 34/578 (5%)
Query: 20 AGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYA 79
A SG + SLYVG+LD +VT++ L++LF+ +G V S+RVCRD TRRSLGY YVN+
Sbjct: 56 ATPSGTAPTSASLYVGELDPSVTEAMLFELFNSIGPVASIRVCRDAVTRRSLGYAYVNFH 115
Query: 80 NPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFS 139
N D +ALD LN+T + + RIM+S RDPS+RK GTGN+FIKNLD +ID+KALHDTFS
Sbjct: 116 NMEDGEKALDELNYTLIKGRPCRIMWSQRDPSLRKMGTGNVFIKNLDPAIDNKALHDTFS 175
Query: 140 SFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER 199
+FG ILSCK+A D G +KG+GFV F++ ESA AI+ +NGML+NDK+V+VGH + ++ER
Sbjct: 176 AFGKILSCKVAVDELGNAKGYGFVHFDSVESANAAIEHVNGMLLNDKKVYVGHHVSRRER 235
Query: 200 ETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFE 257
++ A+K F NV++KNLD T+++ +FG++G ITS +++D + K + FGFVN+
Sbjct: 236 QSKVEALKANFTNVYIKNLDTEITEQEFSDLFGQFGEITSLSLVKDQNDKPRGFGFVNYA 295
Query: 258 NADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIK 317
N + A KAV+ LN K++ ++ YVG+AQKK ERE+EL+ +EQ E ++K+QG+NL+IK
Sbjct: 296 NHECAQKAVDELNDKEYKGKKLYVGRAQKKHEREEELRKAYEQMKLEKMNKYQGVNLFIK 355
Query: 318 NLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMI 377
NL D +DDE+LK FS FGTITS K+M D G SKG GFV ++TPEEA++A+ EMN +M+
Sbjct: 356 NLQDEVDDERLKAEFSAFGTITSAKIMTDEQGKSKGFGFVCYTTPEEANKAVTEMNQRML 415
Query: 378 VSKPLYVAVAQRKEERRARLQA------QFSQMRPVAMGPSVPPRM-----PM-YPPG-- 423
KPLYVA+AQRKE RR++L+A QF + VA +P P+ Y PG
Sbjct: 416 AGKPLYVALAQRKEVRRSQLEAQIQARNQFRLQQQVAAAAGIPAVQYGATGPLIYGPGGY 475
Query: 424 --PSGLGQQFLYGQAPPAIIPPQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVD--- 478
P+ + G+ P + P + PL ++ P G + PVP
Sbjct: 476 PIPAAVN-----GRGMPMVPGHNGPMPMYPGMPPLSSLLEVRPGYPGMNARGPVPAQGRP 530
Query: 479 --MGAGIPRRDASVGQPMPITA-----LSTALANASPEQQRT-LLGESLYPLVEQLERDA 530
M +P + + +P + A A PE+ R +LGE LYP V E
Sbjct: 531 MMMPGSVPSAGPAEAEAVPAVPGMPERFTAADLAAVPEESRKQVLGELLYPKVFVREEKL 590
Query: 531 AAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLR 568
+ K+TGMLLEM +E+L LLE AL +V EA+ VL+
Sbjct: 591 SGKITGMLLEMPNSELLELLEDDSALNERVNEAIGVLQ 628
>gi|308806325|ref|XP_003080474.1| polyadenylate-binding protein, putative / PABP, putative (ISS)
[Ostreococcus tauri]
gi|116058934|emb|CAL54641.1| polyadenylate-binding protein, putative / PABP, putative (ISS)
[Ostreococcus tauri]
Length = 504
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 240/434 (55%), Positives = 311/434 (71%), Gaps = 21/434 (4%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
T+SLYVGDL+ +VT++QLY+ FS +G V+S+RVCRDL TRRSLGY YVN+ + +DAA A+
Sbjct: 31 TSSLYVGDLETSVTEAQLYEKFSSIGPVVSIRVCRDLITRRSLGYAYVNFQSSSDAAHAI 90
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
DVLNF +N K IR++YS RDP++R+SG GNIFIKNLDK+ID+KAL DTF+ FG I S K
Sbjct: 91 DVLNFQVINGKPIRVLYSQRDPAVRRSGVGNIFIKNLDKAIDNKALLDTFAQFGTITSAK 150
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKF 208
+A D +G SKG+GFVQFE E+AQ AID +NGM +NDKQV+VG F R+ +R T + KF
Sbjct: 151 VAMDSAGNSKGYGFVQFETAEAAQAAIDNVNGMELNDKQVYVGPFQRRADRSTQG-EAKF 209
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NNV+VKNL E+ +DE L++ F E+G +TS V+M+D +GKSK FGFV FE+ + AA AVE
Sbjct: 210 NNVYVKNLSENLSDEKLREKFAEHGAVTSCVIMKDEEGKSKGFGFVCFESPEGAASAVEN 269
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
L+G D++ W V +AQKK+ERE ELK +FE +E ++K G NLYIKNL + DDEKL
Sbjct: 270 LDGYTEDEKTWVVCRAQKKAEREAELKAKFEAERRERMEKMAGANLYIKNLEEGTDDEKL 329
Query: 329 KELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
+ELF+EFGTITSC+VMRD SG S+GS FVAFS+P+EA+RA+ EMNGKM+ +KPLYVA+AQ
Sbjct: 330 RELFNEFGTITSCRVMRDASGASRGSAFVAFSSPDEATRAVTEMNGKMVGAKPLYVALAQ 389
Query: 389 RKEERRA-RLQAQFSQMRPVA----MGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPP 443
RKEE A R A + + A + P P Y + G +F
Sbjct: 390 RKEEPHAGRWHAGYGPVHATAGCSGRADVLRPTAPGYDAAAAATGLRF------------ 437
Query: 444 QMPPRGHAYRYPLG 457
P HA+R G
Sbjct: 438 ---PTSHAWRSATG 448
>gi|71018821|ref|XP_759641.1| hypothetical protein UM03494.1 [Ustilago maydis 521]
gi|74701642|sp|Q4P8R9.1|PABP_USTMA RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|46099399|gb|EAK84632.1| hypothetical protein UM03494.1 [Ustilago maydis 521]
Length = 651
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 280/597 (46%), Positives = 392/597 (65%), Gaps = 63/597 (10%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
TSLYVG+LD +VT++ L+++FS +G V S+RVCRD TRRSLGY YVN+ N AD RA+
Sbjct: 46 NTSLYVGELDPSVTEAMLFEIFSMIGTVASIRVCRDAVTRRSLGYAYVNFLNAADGERAM 105
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LN++ + N+ RIM+S RDP++R++G GNIFIKNLD ID+KALHDTF++FGNILSCK
Sbjct: 106 EQLNYSLIRNRPCRIMWSQRDPALRRTGQGNIFIKNLDAGIDNKALHDTFAAFGNILSCK 165
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK- 207
+AT+ +G S G+GFV +E E+A+ AI +NGML+NDK+V+VGH + ++ER+ +T+
Sbjct: 166 VATNETG-SLGYGFVHYETAEAAEAAIKHVNGMLLNDKKVYVGHHIPRKERQAKIEETRA 224
Query: 208 -FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
F NV+ KN+D TD++ +K+F ++G ITS V+ RD DGKSK FGFVNFE+ ++A KAV
Sbjct: 225 NFTNVYAKNVDPEVTDDEFEKLFTKFGKITSCVLQRDEDGKSKGFGFVNFEDHNEAQKAV 284
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
+ L+ F ++ +V +AQKKSERE+EL+ +E A E + KFQG+NLY+KN+ +S DDE
Sbjct: 285 DELHDSDFKGQKLFVARAQKKSEREEELRRSYEAAKNEKLAKFQGVNLYLKNIPESYDDE 344
Query: 327 KLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 386
+L+E F+ FG ITSCK+MR PSG+S+G GFV +S PEEA++A++EMNGKM+ ++PLYVA+
Sbjct: 345 RLREEFAPFGAITSCKIMRAPSGVSRGFGFVCYSAPEEANKAVSEMNGKMLDNRPLYVAL 404
Query: 387 AQRKEERRARLQAQF-------SQMRPVAMGPSVP------PRMPMYPPGPSGLGQQFLY 433
AQRK+ RR +L+AQ Q + A G P P+ +P P G+ + Y
Sbjct: 405 AQRKDVRRQQLEAQIMQRNQLRLQQQAAAQGMGYPGPGMYYPQPGAFPGQPGGMVPRPRY 464
Query: 434 GQAPPAIIPPQMP--PRGHAYRYPLGRNMQDF---------------------------- 463
AP ++P MP P G ++P G Q +
Sbjct: 465 --APAGMMPQGMPMAPYGQPGQFPAGMMPQGYRPARPPRGAPNAAGGPAPPAGARPPTGV 522
Query: 464 ---PFDMGAGSMLPVPVDMGAGIPRRDAS--VGQP---MPITALSTALANASPEQQRTLL 515
P G PVP G +PR A+ G+P P + ALA ASPE+Q+ +L
Sbjct: 523 NGAPRPAGQ----PVP---GQPMPRGPAARPAGRPEADQPGALTAAALAKASPEEQKQML 575
Query: 516 GESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQ 572
GE++YP V + + A K+TGM+LE+ TE+LHLLE EAL AKV EA+EVL+ Q
Sbjct: 576 GEAIYPKVAASQPELAGKLTGMILELPVTELLHLLEESEALDAKVNEALEVLKEYQQ 632
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 3/100 (3%)
Query: 291 EQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP-SG 349
EQ G EQ + D +LY+ L S+ + L E+FS GT+ S +V RD +
Sbjct: 28 EQPAVGNGEQ--RNNADAANNTSLYVGELDPSVTEAMLFEIFSMIGTVASIRVCRDAVTR 85
Query: 350 ISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQR 389
S G +V F + RA+ ++N +I ++P + +QR
Sbjct: 86 RSLGYAYVNFLNAADGERAMEQLNYSLIRNRPCRIMWSQR 125
>gi|119496945|ref|XP_001265244.1| polyadenylate-binding protein [Neosartorya fischeri NRRL 181]
gi|158512647|sp|A1D4K4.1|PABP_NEOFI RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|119413406|gb|EAW23347.1| polyadenylate-binding protein [Neosartorya fischeri NRRL 181]
Length = 751
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 299/679 (44%), Positives = 389/679 (57%), Gaps = 133/679 (19%)
Query: 19 AAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNY 78
+A S NQ + SLYVG+LD +VT++ LY+LFS +GQV S+RVCRD TRRSLGY YVNY
Sbjct: 41 SATPSANQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNY 100
Query: 79 ANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTF 138
N AD RAL+ LN+T + K RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF
Sbjct: 101 NNTADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDTF 160
Query: 139 SSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQE 198
++FGNILSCK+A D G SKG+GFV +E E+A NAI +NGML+NDK+VFVGH + K++
Sbjct: 161 AAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKD 220
Query: 199 RETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNF 256
R++ +K F NV++KN+D+ TDE+ +K+F ++G ITSA + RD +GKS+ FGFVNF
Sbjct: 221 RQSKFEEMKANFTNVYIKNIDQEVTDEEFRKMFEKFGEITSATLSRDQEGKSRGFGFVNF 280
Query: 257 ENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYI 316
D A AV+ +N K+ ++ YVG+AQKK ERE+EL+ Q+E A E K+QG+NLY+
Sbjct: 281 STHDSAQAAVDEMNDKEIKGQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYV 340
Query: 317 KNLGDSIDDEKLKELFSEFGTITSCKVMRDPS---------------------------- 348
KNL D +DDEKL+ELFS FGTITS KVMRD
Sbjct: 341 KNLTDDVDDEKLRELFSPFGTITSAKVMRDTVTAGETSESEKEKESNKENEKEGEEKTEE 400
Query: 349 -----------------GISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKE 391
G SKG GFV FS+P+EAS+A+ EMN +M+ KPLYVA+AQRK+
Sbjct: 401 KPKESEEEAKKTEKKILGKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKPLYVALAQRKD 460
Query: 392 ERRARLQAQFSQ-------------------MRP-VAMGP-------------------- 411
RR++L+A M+P V GP
Sbjct: 461 VRRSQLEASIQARNTIRQQQAAAAAGMPQPYMQPAVFYGPGQQGFIPAGQRGGMPFAPQP 520
Query: 412 ----SVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPP--QMPPRGHAYRYPLG-RNMQDFP 464
+P P PGP GQQ G P IPP Q P G A + P G N +P
Sbjct: 521 GMVMGIPGGRPGQYPGPF-PGQQGGRGMGPNQQIPPNFQGIPMG-AMQGPGGIPNGMGYP 578
Query: 465 ------FDMGAGSMLPVP-VDMGAGIPRRDASVG-------------------------- 491
F GAG VP + MG G+ G
Sbjct: 579 QMAQVQFGRGAGGRGQVPGMPMGQGMRGPGYGQGRGGAPVQGGPRPQGGRGQPAAAPPAA 638
Query: 492 --QPMPITALSTA--LANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVL 547
+ +P T TA L P QQ+ +LGE+LYP ++ + + A K+TGMLLEMD TE+L
Sbjct: 639 GREEVPATGGLTAQTLNAVPPPQQKQMLGEALYPKIQAQQPELAGKITGMLLEMDNTELL 698
Query: 548 HLLESPEALKAKVAEAMEV 566
LLE EAL+AKV EA+ V
Sbjct: 699 GLLEDEEALRAKVDEALSV 717
>gi|328782034|ref|XP_396057.4| PREDICTED: polyadenylate-binding protein 1-like isoform 1 [Apis
mellifera]
Length = 601
Score = 480 bits (1236), Expect = e-133, Method: Compositional matrix adjust.
Identities = 282/627 (44%), Positives = 377/627 (60%), Gaps = 125/627 (19%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL ++T++ L++ FS G VLS+RVCRD+ TRRSLGY YVN+ PADA RALD
Sbjct: 12 SLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF + + IRIM+S RDPS+RKSG GN+FIKNLDK+ID+KA++DTFS+FGNILSCK+A
Sbjct: 72 MNFDMIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVA 131
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNN 210
D SG SKG+GFV FE +E+A +ID++NGML+N K
Sbjct: 132 QDESGVSKGYGFVHFETEEAANKSIDRVNGMLLNGK------------------------ 167
Query: 211 VFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALN 270
KN E TD+ LK++F +YGTITS VM DGKS+ FGFV FE+ D A +AV LN
Sbjct: 168 ---KNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGKSRGFGFVAFEDPDAAEQAVLELN 224
Query: 271 GKKF-DDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLK 329
GK+ + + YVG+AQKK+ER+QELK +FEQ E ++++QG+NLY+KNL DSIDDE+L+
Sbjct: 225 GKEVAEGKCMYVGRAQKKAERQQELKRKFEQLKLERLNRYQGVNLYVKNLDDSIDDERLR 284
Query: 330 ELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQR 389
+ F+ FGTITS KVM + G SKG GFV FS PEEA++A+ EMNG++IV+KPLYVA+AQR
Sbjct: 285 KEFAPFGTITSAKVMME-EGRSKGFGFVCFSAPEEATKAVTEMNGRIIVTKPLYVALAQR 343
Query: 390 KEERRARLQAQFSQ----MRPVAMG-------------PSVP-----------------P 415
KE+R+A L +Q+ Q MR MG P++P P
Sbjct: 344 KEDRKAHLASQYMQRLANMRMQQMGQIFQPGGAGNYFVPTIPQPQRFYGPAQMAQIRTTP 403
Query: 416 RMPMYP--------PGPSGL-------------------------------GQQFLYG-- 434
R P P G SG GQQ + G
Sbjct: 404 RWPAQPNQVRPNAQTGSSGFATMQGPFRAAPRAPTAQAGTMRNTLSARPITGQQAVGGAN 463
Query: 435 -----QAPPAI-IPPQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDA 488
A PA+ + Q P + Y NM++ P M + P PV I ++
Sbjct: 464 MQNRSMAGPAVGVSAQSRPSNYKYT----SNMRNPPQAMAIPA--PTPVQQAVHIQGQE- 516
Query: 489 SVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLH 548
P+TA + LA A P++Q+ +LGE L+PL++ + K+TGMLLE+D +E+LH
Sbjct: 517 ------PLTA--SMLAAAPPQEQKQMLGERLFPLIQCMYPQLTGKITGMLLEIDNSELLH 568
Query: 549 LLESPEALKAKVAEAMEVLRSVAQQQA 575
+LE E+LKAKV EA+ VL++ +QA
Sbjct: 569 MLEHNESLKAKVEEAVAVLQAHQAKQA 595
Score = 45.1 bits (105), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
N++ +LYV +LD ++ D +L F+ G + S +V + RS G+G+V ++ P +A
Sbjct: 262 NRYQGVNLYVKNLDDSIDDERLRKEFAPFGTITSAKVM--MEEGRSKGFGFVCFSAPEEA 319
Query: 85 ARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNL 125
+A+ +N + K + + + R RK+ + +++ L
Sbjct: 320 TKAVTEMNGRIIVTKPLYVALAQRKED-RKAHLASQYMQRL 359
>gi|219130188|ref|XP_002185253.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403432|gb|EEC43385.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 605
Score = 480 bits (1236), Expect = e-133, Method: Compositional matrix adjust.
Identities = 270/583 (46%), Positives = 377/583 (64%), Gaps = 43/583 (7%)
Query: 19 AAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNY 78
A+ AS N F T SLYVGDL +V +S L+++FS VG V S+RVCRD TRRSLGY YVN+
Sbjct: 28 ASTASDNPFQTPSLYVGDLAPDVNESLLFEIFSAVGPVASIRVCRDAVTRRSLGYSYVNF 87
Query: 79 ANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTF 138
ADA RA+D +NF+ + K RIM+S RDPS+R+SG GNIF+KNL+++ID+K L+DTF
Sbjct: 88 HQMADAERAMDTMNFSMIKGKPCRIMWSQRDPSLRRSGVGNIFVKNLNEAIDNKQLYDTF 147
Query: 139 SSFGNILSCKIATDGSGQ-SKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQ 197
S FGNILSCK+ TD G S G+G+V +E E+A AI+KL+GMLI+ ++V VGHF+R+
Sbjct: 148 SLFGNILSCKVVTDREGGVSMGYGYVHYETAEAANAAIEKLDGMLIDGQEVQVGHFMRRN 207
Query: 198 ERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFE 257
+R + + N ++KN+ D L + F ++G + SA V R+ ++ FGF+NF
Sbjct: 208 DRPDI---DSWTNCYIKNVPYEWDDARLNQEFAQFGEVLSATVSREDTNQTLGFGFINFA 264
Query: 258 NADDAAKAVEALNGKKFD--------DREWYVGKAQKKSEREQELKGQFEQAMKETVDKF 309
+ A AVEALNGK++ ++ YVG+AQKKSERE+EL+ +FE + + KF
Sbjct: 265 EHESAVAAVEALNGKEYTTTLDGEEITQQIYVGRAQKKSERERELRAKFEAEKMDRISKF 324
Query: 310 QGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPS-GISKGSGFVAFSTPEEASRA 368
QG+NLY+KNL DS+ D+ L++ F+ GTITS +VM+D G S+G GFV +STPEE++RA
Sbjct: 325 QGVNLYVKNLDDSVTDDMLRDEFAVMGTITSARVMKDAKDGRSRGFGFVCYSTPEESTRA 384
Query: 369 LAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQ----------MRPVAMGPSVPPRMP 418
+ EMNGK+I +KP++VA+AQR+E RRA+L+AQ + MR P P MP
Sbjct: 385 VNEMNGKLIANKPIFVALAQRREVRRAQLEAQHANRAGGPGQPGMMRAPMGAPMGYPGMP 444
Query: 419 MY--PPGPSGLGQQFLYGQAPPAIIPPQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVP 476
MY PGP G G Q Y ++P M P G R P+ M P+
Sbjct: 445 MYMQRPGPGG-GMQPAY-----PMMPQMMGPGGR--RVPMAGRGGRGRGPMPGPGQQPIK 496
Query: 477 VDM---GAGIPRRD---ASVGQPMPI----TALSTALANASPEQQRTLLGESLYPLVEQL 526
+ AG P ++ G P I ++ALA+ASPE Q+ ++GE LYPL+ Q
Sbjct: 497 FNQQVRNAGPPMQNQPPHQQGAPQAIPHEGALTASALASASPEVQKNMIGERLYPLIHQS 556
Query: 527 ERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRS 569
+ + A K+TGMLLEMD +E+LHLLESP+AL +K++EA++VL +
Sbjct: 557 QPELAGKITGMLLEMDNSELLHLLESPDALNSKISEALQVLEA 599
>gi|384493509|gb|EIE84000.1| hypothetical protein RO3G_08705 [Rhizopus delemar RA 99-880]
Length = 624
Score = 480 bits (1235), Expect = e-132, Method: Compositional matrix adjust.
Identities = 240/427 (56%), Positives = 311/427 (72%), Gaps = 7/427 (1%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVG+LD +VT++ L+++F+ +G V S+RVCRD TRRSLGY YVN+ N D RAL
Sbjct: 43 SASLYVGELDPSVTEAMLFEMFNMIGPVASIRVCRDAVTRRSLGYAYVNFHNIVDGERAL 102
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LN+T + K RIM+S RDPS+RK+G+GN+FIKNLD SID+KALHDTFS+FGNILSCK
Sbjct: 103 ESLNYTLIKGKPCRIMWSQRDPSLRKTGSGNVFIKNLDPSIDNKALHDTFSAFGNILSCK 162
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVA--IKT 206
IA D SG SKG+GFV +E +E+A NAI +NGML+NDK+V+VG + K+ER+ +
Sbjct: 163 IALDESGNSKGYGFVHYETEEAADNAIKHVNGMLLNDKKVYVGRHVPKKERQAKIEQFRA 222
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
KF NV+VKNLDES DE+ ++ ++G ITSA+V D +GKSK FGFVNFEN +DA KAV
Sbjct: 223 KFTNVYVKNLDESVKDEEFNEMLAKFGPITSALVQTDDEGKSKGFGFVNFENHEDAQKAV 282
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
+ALN + + YV +AQKK+ERE+EL+ Q+EQA E + K+QG+NLYIKNL D IDDE
Sbjct: 283 DALNETEHKGKILYVARAQKKTEREEELRKQYEQAKLEKLAKYQGVNLYIKNLDDDIDDE 342
Query: 327 KLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 386
KL++ FS +G ITS KVM D SKG GFV FS+P+EA++A+ EMNG+MI SKP+YVA+
Sbjct: 343 KLRQEFSVYGVITSAKVMCDEKDTSKGFGFVCFSSPDEATKAVTEMNGRMIGSKPIYVAL 402
Query: 387 AQRKEERRARLQAQFSQMRPVAMGPSVP-PRMPMYPPGPSGL----GQQFLYGQAPPAII 441
AQRKE RR++L+AQ +Q + M +P P P Y PG GQ GQ P
Sbjct: 403 AQRKEIRRSQLEAQMAQRNQMRMQQGMPMPGAPGYMPGAPMFYAPPGQFMPQGQRPAVFA 462
Query: 442 PPQMPPR 448
P M PR
Sbjct: 463 PNGMMPR 469
>gi|66800163|ref|XP_629007.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|74996426|sp|Q54BM2.1|PAP1A_DICDI RecName: Full=Polyadenylate-binding protein 1-A; Short=PABP-1-A;
Short=Poly(A)-binding protein, cytoplasmic 1-A
gi|60462370|gb|EAL60591.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 565
Score = 480 bits (1235), Expect = e-132, Method: Compositional matrix adjust.
Identities = 275/582 (47%), Positives = 358/582 (61%), Gaps = 65/582 (11%)
Query: 28 LTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARA 87
+++SLYVGDL V++ L+++F+QVG V ++RVCRD +TRRSL Y YVNY N ADA RA
Sbjct: 8 ISSSLYVGDLLPEVSEQHLFEIFNQVGLVSNIRVCRDTNTRRSLSYAYVNYYNGADAERA 67
Query: 88 LDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSC 147
LD LN TP+ K+ RIM+S RDPS+RKSG GN+FIKNLDK IDHKAL+DTFS+FGNILSC
Sbjct: 68 LDTLNNTPIRGKACRIMWSQRDPSLRKSGVGNVFIKNLDKGIDHKALYDTFSAFGNILSC 127
Query: 148 KIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK 207
K+ TD SKGFGFV +E +ESA AI K+NGM+IN ++VFVG F +ER + K
Sbjct: 128 KVVTDDGNSSKGFGFVHYETQESADKAIAKVNGMMINGQKVFVGPFKSSKERGQ-PTEVK 186
Query: 208 FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVE 267
F NVF KNL E + LK++ +YG IT+ +M D GKSK FGF NFE+A+ A VE
Sbjct: 187 FTNVFFKNLSEDVGPDQLKELLQQYGEITNITIMADDKGKSKGFGFANFESAEAAKNVVE 246
Query: 268 ALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEK 327
NGK F + Y G+AQKK ERE ELK FE K+QG+NLYIKN+ DSID++K
Sbjct: 247 NENGKIFHGKPIYAGRAQKKIEREAELKHTFE-------TKYQGVNLYIKNIDDSIDNDK 299
Query: 328 LKELFSEFGTITSCKVMR-DPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 386
L+E+FS+FGTITS VM+ D + SKG GFV ++ P+EA+RA+ EMNG+MI +KPLYVA+
Sbjct: 300 LREVFSQFGTITSAIVMKDDKATTSKGFGFVCYTAPDEATRAVTEMNGRMIGTKPLYVAL 359
Query: 387 AQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAP--PAIIPPQ 444
AQRK+ RRA+L+ Q Q + +P P Y GP + AP P ++ Q
Sbjct: 360 AQRKDIRRAQLEMQHQQKFKTGIRQQMP---PTYGSGP------VFFTPAPVNPQVVYQQ 410
Query: 445 MPPRGHAY---------------RYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDAS 489
M PR + Y G+ Q+ P G P G PR D S
Sbjct: 411 MMPRPRNWNGQPVGVPQGQYANMNYARGQPRQNGPRQNGGQ-----PRQNG---PRPDVS 462
Query: 490 VGQPMPITALST--------ALANA-------------SPEQQRTLLGESLYPLVEQLER 528
QP+P+ +T A ++A S +QQ LGE LYPL+ +
Sbjct: 463 GAQPIPVQQQTTLDVAQTQQAASSAESALNLQSIINLPSRDQQNVALGEHLYPLIHNSQP 522
Query: 529 DAAAKVTGMLLE-MDQTEVLHLLESPEALKAKVAEAMEVLRS 569
D A K+TGMLL+ + E+ L + + L K+ EA+EVL S
Sbjct: 523 DLAGKITGMLLDSLPVEELFTLTQRQDLLADKIREALEVLGS 564
>gi|350408508|ref|XP_003488428.1| PREDICTED: polyadenylate-binding protein 1-like isoform 3 [Bombus
impatiens]
Length = 601
Score = 480 bits (1235), Expect = e-132, Method: Compositional matrix adjust.
Identities = 282/627 (44%), Positives = 376/627 (59%), Gaps = 125/627 (19%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL ++T++ L++ FS G VLS+RVCRD+ TRRSLGY YVN+ PADA RALD
Sbjct: 12 SLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF + + IRIM+S RDPS+RKSG GN+FIKNLDK+ID+KA++DTFS+FGNILSCK+A
Sbjct: 72 MNFDMIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVA 131
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNN 210
D SG SKG+GFV FE +E+A +ID++NGML+N K
Sbjct: 132 QDESGVSKGYGFVHFETEEAANKSIDRVNGMLLNGK------------------------ 167
Query: 211 VFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALN 270
KN E TD+ LK +F +YGTITS VM DGKS+ FGFV FE+ D A +AV LN
Sbjct: 168 ---KNFGEDMTDDKLKDMFEKYGTITSHKVMIKDDGKSRGFGFVAFEDPDAAEQAVLELN 224
Query: 271 GKKF-DDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLK 329
GK+ + + YVG+AQKK+ER+QELK +FEQ E ++++QG+NLY+KNL DSIDDE+L+
Sbjct: 225 GKEVAEGKCMYVGRAQKKAERQQELKRKFEQLKLERLNRYQGVNLYVKNLDDSIDDERLR 284
Query: 330 ELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQR 389
+ F+ FGTITS KVM + G SKG GFV FS PEEA++A+ EMNG++IV+KPLYVA+AQR
Sbjct: 285 KEFAPFGTITSAKVMME-EGRSKGFGFVCFSAPEEATKAVTEMNGRIIVTKPLYVALAQR 343
Query: 390 KEERRARLQAQFSQ----MRPVAMG-------------PSVP-----------------P 415
KE+R+A L +Q+ Q MR MG P++P P
Sbjct: 344 KEDRKAHLASQYMQRLANMRMQQMGQIFQPGGAGNYFVPTIPQPQRFYGPAQMAQIRTTP 403
Query: 416 RMPMYP--------PGPSGL-------------------------------GQQFLYG-- 434
R P P G SG GQQ + G
Sbjct: 404 RWPAQPNQVRPNAQTGSSGFATMQGPFRAAPRAPTAQPGAMRSTLSARPITGQQTVGGAN 463
Query: 435 -----QAPPAI-IPPQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDA 488
A PA+ + Q P + Y NM++ P M + P PV I ++
Sbjct: 464 MQNRSMAGPAVGVTAQSRPSNYKYT----SNMRNPPQAMAIPA--PTPVQQAVHIQGQE- 516
Query: 489 SVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLH 548
P+TA + LA A P++Q+ +LGE L+PL++ + K+TGMLLE+D +E+LH
Sbjct: 517 ------PLTA--SMLAAAPPQEQKQMLGERLFPLIQCMYPQLTGKITGMLLEIDNSELLH 568
Query: 549 LLESPEALKAKVAEAMEVLRSVAQQQA 575
+LE E+LKAKV EA+ VL++ +QA
Sbjct: 569 MLEHNESLKAKVEEAVAVLQAHQAKQA 595
Score = 45.1 bits (105), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
N++ +LYV +LD ++ D +L F+ G + S +V + RS G+G+V ++ P +A
Sbjct: 262 NRYQGVNLYVKNLDDSIDDERLRKEFAPFGTITSAKVM--MEEGRSKGFGFVCFSAPEEA 319
Query: 85 ARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNL 125
+A+ +N + K + + + R RK+ + +++ L
Sbjct: 320 TKAVTEMNGRIIVTKPLYVALAQRKED-RKAHLASQYMQRL 359
>gi|313218343|emb|CBY41581.1| unnamed protein product [Oikopleura dioica]
Length = 613
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 278/601 (46%), Positives = 371/601 (61%), Gaps = 70/601 (11%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL T++ LYD FSQ G VLS+RVCRD+ TRRSLGY YVN+ P DA RA+D
Sbjct: 12 SLYVGDLHPEATEAMLYDKFSQAGPVLSIRVCRDMITRRSLGYAYVNFQRPEDAERAIDT 71
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF L K+IRIM+S RDP++RKSG GNIFIKNLDK+ID+K L+DTFS+FGNILSCK+
Sbjct: 72 MNFDELKGKAIRIMWSQRDPALRKSGVGNIFIKNLDKTIDNKMLYDTFSAFGNILSCKVN 131
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQE--RETVAIKTKF 208
+ +G+SKG+GFV FE +E+A AI+KL+GML+NDK+VFVG F + E RE +F
Sbjct: 132 VNLAGESKGYGFVHFETEEAAVKAIEKLDGMLMNDKKVFVGRFKSRGERVREYGDRAKQF 191
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NVF+KNL D L ++FGE+G++ S + D +GKS+ FGFV+FE + A K VE
Sbjct: 192 TNVFIKNLPAEWDDAKLTEVFGEHGSVMSVALATDENGKSRQFGFVSFETHECAEKVVEK 251
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
L+ K+F+ ++ +VG+AQKK+ER+ ELK +FE+ E ++QG+NLY+KNL DSI D+ L
Sbjct: 252 LHDKEFEGKKIFVGRAQKKAERQAELKVKFEKLKHERNQRYQGVNLYVKNLDDSITDDIL 311
Query: 329 KELFSEFGTITSCKVMRDPS---GISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVA 385
+E F+ +G ITS KVM D SKG GFV F++ EEA++A+ EMNG++I SKPLYVA
Sbjct: 312 REHFAPYGNITSSKVMTDTDVEGTRSKGFGFVCFTSAEEATKAVTEMNGRIIASKPLYVA 371
Query: 386 VAQRKEERRARLQAQFSQMRPVAMG-PSVPPRMPMY-----PP-----------GPSGLG 428
+AQRK+ER+A LQ Q+ Q M + P P Y PP P+
Sbjct: 372 LAQRKDERKAHLQQQYMQRVTTGMRLQAFPTNQPQYGNLYMPPPIQQHPFRMSIRPTPRW 431
Query: 429 QQFLYGQ-----------APPAIIPP----QMP--PRGH--------AYRYPL------- 456
Q Y Q P+ P QMP PR R+P
Sbjct: 432 SQVKYDQLVKLRSKIRFLIKPSQYGPMVRGQMPGGPRAQNGVRGIAPITRFPANNYTARA 491
Query: 457 -GRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQP------MPITALSTALANASPE 509
R Q + G + LP P + A IP A+ QP P+ A T LA A P+
Sbjct: 492 GSRPNQSIIYKPGVRNPLPTPAE--AQIPAEQAA--QPKAPDTEQPLNA--TILAAAPPQ 545
Query: 510 QQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLES---PEALKAKVAEAMEV 566
+Q+ LLGE LYP + QL + K+TGMLLE++ +E+L +L++ P L+ KV EA+ V
Sbjct: 546 EQKQLLGERLYPSIRQLYPELCGKITGMLLEIENSELLAMLDTKSNPGLLQEKVQEAVTV 605
Query: 567 L 567
L
Sbjct: 606 L 606
>gi|383862671|ref|XP_003706807.1| PREDICTED: polyadenylate-binding protein 1-like isoform 3
[Megachile rotundata]
Length = 601
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 282/627 (44%), Positives = 375/627 (59%), Gaps = 125/627 (19%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL ++T++ L++ FS G VLS+RVCRD+ TRRSLGY YVN+ PADA RALD
Sbjct: 12 SLYVGDLHADITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF + + IRIM+S RDPS+RKSG GN+FIKNLDK+ID+KA++DTFS+FGNILSCK+A
Sbjct: 72 MNFDMIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVA 131
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNN 210
D SG SKG+GFV FE +E+A +IDK+NGML+N K
Sbjct: 132 QDESGVSKGYGFVHFETEEAANKSIDKVNGMLLNGK------------------------ 167
Query: 211 VFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALN 270
KN E TD+ LK++F +YGTITS VM DGKS+ FGFV FE+ D A +AV LN
Sbjct: 168 ---KNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGKSRGFGFVAFEDPDAAEQAVLELN 224
Query: 271 GKKF-DDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLK 329
GK+ + + YVG+AQKK+ER+QELK +FEQ E + ++QG+NLY+KNL DSI+DE+L+
Sbjct: 225 GKEVAEGKCMYVGRAQKKAERQQELKRKFEQLKLERLSRYQGVNLYVKNLDDSINDERLR 284
Query: 330 ELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQR 389
F+ FGTITS KVM + G SKG GFV FS PEEA++A+ EMNG++IV+KPLYVA+AQR
Sbjct: 285 REFAPFGTITSAKVMME-DGRSKGFGFVCFSAPEEATKAVTEMNGRIIVTKPLYVALAQR 343
Query: 390 KEERRARLQAQFSQ----MRPVAMG-------------PSVP-----------------P 415
KE+R+A L +Q+ Q MR MG P++P P
Sbjct: 344 KEDRKAHLASQYMQRLANMRMQQMGQMFPPGGAGNYFVPTIPQPQRFYGPAQMAQIRATP 403
Query: 416 RMPMYP--------PGPSGL-------------------------------GQQFLYG-- 434
R P P G SG GQQ + G
Sbjct: 404 RWPAQPNQVRPNAQTGNSGFATMQGPFRTTPRAPTAQAGTMRSTLSARPITGQQAVGGAN 463
Query: 435 -----QAPPAI-IPPQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDA 488
A PA+ + Q P + Y NM++ P M + P PV I ++
Sbjct: 464 MQSRSMAGPAVGVSAQSRPSNYKYT----SNMRNPPQAMAIPA--PTPVQQAVHIQGQE- 516
Query: 489 SVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLH 548
P+TA + LA A P++Q+ +LGE L+PL++ + K+TGMLLE+D +E+LH
Sbjct: 517 ------PLTA--SMLAAAPPQEQKQMLGERLFPLIQCMYPQLTGKITGMLLEIDNSELLH 568
Query: 549 LLESPEALKAKVAEAMEVLRSVAQQQA 575
+LE E+LKAKV EA+ VL++ +QA
Sbjct: 569 MLEHNESLKAKVEEAVAVLQAHQAKQA 595
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
+++ +LYV +LD ++ D +L F+ G + S +V + RS G+G+V ++ P +A
Sbjct: 262 SRYQGVNLYVKNLDDSINDERLRREFAPFGTITSAKVM--MEDGRSKGFGFVCFSAPEEA 319
Query: 85 ARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNL 125
+A+ +N + K + + + R RK+ + +++ L
Sbjct: 320 TKAVTEMNGRIIVTKPLYVALAQRKED-RKAHLASQYMQRL 359
>gi|70990636|ref|XP_750167.1| polyadenylate-binding protein [Aspergillus fumigatus Af293]
gi|74669855|sp|Q4WK03.1|PABP_ASPFU RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|66847799|gb|EAL88129.1| polyadenylate-binding protein [Aspergillus fumigatus Af293]
gi|159130644|gb|EDP55757.1| polyadenylate-binding protein [Aspergillus fumigatus A1163]
Length = 753
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 297/677 (43%), Positives = 387/677 (57%), Gaps = 135/677 (19%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
S +Q + SLYVG+LD +VT++ LY+LFS +GQV S+RVCRD TRRSLGY YVNY N A
Sbjct: 45 SASQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTA 104
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
D RAL+ LN+T + K RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++FG
Sbjct: 105 DGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDTFAAFG 164
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 202
NILSCK+A D G SKG+GFV +E E+A NAI +NGML+NDK+VFVGH + K++R++
Sbjct: 165 NILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSK 224
Query: 203 --AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
+K F NV++KN+D+ TDE+ +K+F ++G ITSA + RD +GKS+ FGFVNF D
Sbjct: 225 FEEMKANFTNVYIKNIDQEVTDEEFRKMFEKFGEITSATLSRDQEGKSRGFGFVNFSTHD 284
Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
A AV+ +N K+ ++ YVG+AQKK ERE+EL+ Q+E A E K+QG+NLY+KNL
Sbjct: 285 SAQAAVDEMNDKEIKGQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLT 344
Query: 321 DSIDDEKLKELFSEFGTITSCKVMRDPS-------------------------------- 348
D +DDEKL+ELFS FGTITS KVMRD
Sbjct: 345 DDVDDEKLRELFSPFGTITSAKVMRDTVTTGETSESEKEKEKESNKENEKEGEEKTEEKP 404
Query: 349 ---------------GISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEER 393
G SKG GFV FS+P+EAS+A+ EMN +M+ KPLYVA+AQRK+ R
Sbjct: 405 KESEEEPKKTEKKILGKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKPLYVALAQRKDVR 464
Query: 394 RARLQAQFSQ-------------------MRP-VAMGP---------------------- 411
R++L+A M+P V GP
Sbjct: 465 RSQLEASIQARNTIRQQQAAAAAGMPQPYMQPAVFYGPGQQGFIPAGQRGGMPFAPQPGM 524
Query: 412 --SVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPP--QMPPRGHAYRYPLG-RNMQDFP-- 464
+P P PGP GQQ G P IPP Q P G A + P G N +P
Sbjct: 525 VMGIPGGRPGQYPGPF-PGQQGGRGMGPNQQIPPNFQGIPMG-AMQGPGGIPNGMGYPQM 582
Query: 465 ----FDMGAGSMLPVP-VDMGAGIPRRDASVG---------------------------- 491
F GAG VP + MG GI G
Sbjct: 583 AQVQFGRGAGGRGQVPGMPMGQGIRGPGYGQGRGGAPVQGGPRPQGGRGQPAAAPPAAGR 642
Query: 492 QPMPITALSTA--LANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHL 549
+ +P T TA L+ P QQ+ +LGE+LYP ++ + + A K+TGMLLEMD E+L L
Sbjct: 643 EEVPATGGLTAQTLSAVPPPQQKQMLGEALYPKIQAQQPELAGKITGMLLEMDNNELLGL 702
Query: 550 LESPEALKAKVAEAMEV 566
LE EAL+AKV EA+ V
Sbjct: 703 LEDEEALRAKVDEALSV 719
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 101/300 (33%), Positives = 161/300 (53%), Gaps = 21/300 (7%)
Query: 110 PSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENK 168
PS + + ++++ LD S+ L++ FSS G + S ++ D + +S G+ +V + N
Sbjct: 44 PSASQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNT 103
Query: 169 ESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKI 228
+ A++ LN LI K + +R+ KT NVF+KNLD + ++ L
Sbjct: 104 ADGERALEDLNYTLIKGKPCRI----MWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDT 159
Query: 229 FGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKS 288
F +G I S V +D G SK +GFV++E A+ A A++ +NG +D++ +VG K
Sbjct: 160 FAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKK 219
Query: 289 ERE---QELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMR 345
+R+ +E+K F N+YIKN+ + DE+ +++F +FG ITS + R
Sbjct: 220 DRQSKFEEMKANF-------------TNVYIKNIDQEVTDEEFRKMFEKFGEITSATLSR 266
Query: 346 DPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
D G S+G GFV FST + A A+ EMN K I + LYV AQ+K ER L+ Q+ R
Sbjct: 267 DQEGKSRGFGFVNFSTHDSAQAAVDEMNDKEIKGQKLYVGRAQKKHEREEELRKQYEAAR 326
>gi|449281934|gb|EMC88877.1| Embryonic polyadenylate-binding protein [Columba livia]
Length = 646
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 275/635 (43%), Positives = 384/635 (60%), Gaps = 95/635 (14%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
ASG + SLYVGDL +VT++ LY+ FS G ++S+RVCRD++TRRSLGY Y+N+ P
Sbjct: 3 ASGPGYPLASLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDVATRRSLGYAYINFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
DA RALD +NF + + IRIM+S RDP +RKSG GN+FIKNLD SID+KAL+DTFS+F
Sbjct: 63 VDAERALDTMNFEVIKGRPIRIMWSQRDPGLRKSGVGNVFIKNLDDSIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G S+G+GFV FE E+A AI+ +NGML+ND++VFVGHF ++ERE
Sbjct: 123 GNILSCKVVCDENG-SRGYGFVHFETHEAATRAIETMNGMLLNDRKVFVGHFKSRKEREA 181
Query: 202 V--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
A +F NV++KN + D+ L++IF ++G S VM D G+SK FGFVNFE
Sbjct: 182 EFGAKAMEFTNVYIKNFGDDMDDDRLREIFSKFGKTLSVKVMMDSTGRSKGFGFVNFEKH 241
Query: 260 DDAAK----------------AVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMK 303
++A K AV +NGK+ + R YVG+AQK+ ER+ ELK +FEQ +
Sbjct: 242 EEAQKARGSSCCAQRPPLRWQAVADMNGKEINGRIVYVGRAQKRLERQSELKRKFEQIKQ 301
Query: 304 ETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPE 363
E V ++QG+NLY+KNL D IDD++L++ FS +GTITS KVM + G SKG GFV FS+PE
Sbjct: 302 ERVSRYQGVNLYVKNLDDGIDDDRLRKEFSPYGTITSAKVMTE-GGHSKGFGFVCFSSPE 360
Query: 364 EASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQ----MRPVA---MGPSVPPR 416
EA++A+ EMNG+++ +KPLYVA+AQRKEER+A L Q+ Q +R + +G PP
Sbjct: 361 EATKAVTEMNGRIVSTKPLYVALAQRKEERKAILTNQYMQRLATLRALPGPLLGSFQPPP 420
Query: 417 MPMYPPGPSGLGQQFLYGQAP----------------PAIIP------------------ 442
PP P + Y +P P P
Sbjct: 421 GYFLPPIPQPQTRATFYSPSPVVPVRPATRWSAQPSRPPPTPILRAAVPPRRLLTNISTM 480
Query: 443 -------PQMPPRGH----------AYRYP----LGRNMQDFPFDMGAGSMLPVPVDMGA 481
P++PP+ + R P L R + + ++ P MG
Sbjct: 481 RQASTQVPRVPPQAQRVANIGTQTVSARVPSSPTLPRGTPQYKYSSSVRNVQP----MGH 536
Query: 482 GIPRRDASVGQPM-------PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKV 534
P VG+P P+TA + LA A P++Q+ ++GE LYPL+ + A K+
Sbjct: 537 MPPVVAPQVGEPAVHVQGQEPLTA--SVLAAAPPQEQKQMIGERLYPLIYAIHPSLAGKI 594
Query: 535 TGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRS 569
TGMLLE+D +E+L LLESP++L++K+ EA+ VL++
Sbjct: 595 TGMLLEIDNSELLLLLESPDSLRSKMEEAVAVLQA 629
>gi|357117760|ref|XP_003560630.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
5-like [Brachypodium distachyon]
Length = 654
Score = 476 bits (1226), Expect = e-131, Method: Compositional matrix adjust.
Identities = 281/611 (45%), Positives = 380/611 (62%), Gaps = 59/611 (9%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ S+YVG+L+ +VT+ QL DLFSQ V+SVR+C D T RSLGY YVN+ + DA AL
Sbjct: 30 SVSVYVGNLEASVTEQQLLDLFSQAVPVVSVRICDDKVTGRSLGYAYVNFHSHEDAKVAL 89
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ NFT +N KSIR+M+S+RDP++R+SG N+FIKNL+ +I K+LH FS FG ILSCK
Sbjct: 90 EYFNFTVVNGKSIRVMFSNRDPTLRRSGAANLFIKNLEPNIVAKSLHQMFSRFGIILSCK 149
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLIND--KQVFVGHFLRKQERETVAIKT 206
+ATD +G+SKG+GFVQF ++ESA++A++ LNG L N KQ++V F+R++ER+ + +
Sbjct: 150 VATDLNGKSKGYGFVQFVSEESAKDAMNALNGKLANGNGKQLYVDLFIRREERQHIGGAS 209
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
KF NV+ KNL + TD+DL ++F +GTITSAVVM+DGDG+SKCFGFVN+E + A +AV
Sbjct: 210 KFTNVYTKNLPKEFTDDDLCRVFAPFGTITSAVVMKDGDGESKCFGFVNYEKTEYAEEAV 269
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
E LNGK D YVG+A++K ER+ ELK +F++ + + K +G NLY+KNL SIDDE
Sbjct: 270 EKLNGKIISDVALYVGRAKRKQERQAELKEKFDKERNDKIRKSKGCNLYLKNLDCSIDDE 329
Query: 327 KLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIV-SKPLYVA 385
L+ LF F I +CKVM D G SKG GFV F+T E A++A++ N + +V +K LYV
Sbjct: 330 YLRNLFGRFDDIGTCKVMVDSEGRSKGFGFVLFTTIEAANKAVSXRNERKLVGTKLLYVC 389
Query: 386 VAQRKEERRARLQAQFSQ-----MRPVAMGPSVPPRMPMY----PPG----PSGLGQQFL 432
VAQRKEER A L AQF++ R AM ++ PR P Y PG P G F
Sbjct: 390 VAQRKEERSAILAAQFARRHMVGARTPAMPQNIAPR-PFYFGYGVPGVLVRPQATG--FG 446
Query: 433 YGQAPPAIIP---------------------------PQMPPRGHAYRY-------PLGR 458
Y Q P +IP Q+P RY P
Sbjct: 447 YQQYPQPVIPGLNPGAPSLMMPYHMLRPIHHQPQQQMAQLPNWNQIVRYMPNACNGPTNS 506
Query: 459 NMQ-DFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGE 517
M F + V D P S+ + I +L+TALA+A PE+Q +LGE
Sbjct: 507 AMAPQMDFVAPVVPQISVLTDSVVTAP----SISEEPSIDSLATALASAEPEKQHLILGE 562
Query: 518 SLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANN 577
L PLV QLE + A KVT MLLE+++ VL L+ES E L+ KV +AME LR ++ N+
Sbjct: 563 RLQPLVAQLEPEHAGKVTEMLLELEKAVVLELIESAENLQEKVNQAMESLRPKKEEGTND 622
Query: 578 PADQLASLSLN 588
PA+ +SLSL+
Sbjct: 623 PAEP-SSLSLS 632
>gi|340939192|gb|EGS19814.1| hypothetical protein CTHT_0042990 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 777
Score = 476 bits (1226), Expect = e-131, Method: Compositional matrix adjust.
Identities = 277/684 (40%), Positives = 386/684 (56%), Gaps = 158/684 (23%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVG+LD +VT++ L++LFSQ+G V S+RVCRD TRRSLGY YVNY + AD +AL
Sbjct: 67 SASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNSVADGEKAL 126
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LN+T + K RIM+S RDP++RK+G GNIFIKNLD +ID+KALHDTF++FGNILSCK
Sbjct: 127 EELNYTLIKGKPCRIMWSQRDPALRKTGHGNIFIKNLDAAIDNKALHDTFAAFGNILSCK 186
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKT 206
+ATD +G SKG+GFV +E E+A AI +NGML+N+K+V+VG+ + K++R++ +K
Sbjct: 187 VATDENGNSKGYGFVHYETDEAAAQAIKHVNGMLLNEKKVYVGYHIPKKDRQSKFEEMKA 246
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
+ NV++KN++ T+E+ ++ F ++G ITS+ + RD +GK + FGFVN+ AAK V
Sbjct: 247 NYTNVYIKNINLEVTEEEFREFFSKWGEITSSTLARDAEGKPRGFGFVNYSTHASAAKCV 306
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
E +NGK++ +E YVG+AQKK ERE+EL+ +E A E +K+QG+NLYIKNL D +DDE
Sbjct: 307 EEMNGKEWRGQELYVGRAQKKHEREEELRKSYEAARLEKQNKYQGVNLYIKNLSDEVDDE 366
Query: 327 KLKELFSEFGTITSCKVMRD----PS---------------------------------- 348
KL+ +F+EFG ITS KVMRD P+
Sbjct: 367 KLRAMFAEFGPITSAKVMRDTPPEPAKDEKNKENNKESEKEGEKKEGEGEGDKKPEVKKP 426
Query: 349 ----GISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRA--------- 395
G SKG GFV F+ P++A++A+AEMN +M+ KPLYVA+AQRKE R++
Sbjct: 427 ERKLGKSKGFGFVCFANPDDATKAVAEMNQRMVDGKPLYVALAQRKEVRKSQLEASIQAR 486
Query: 396 ---RLQAQFSQ------MRPVAMGP----------------------------------- 411
R+Q Q +Q M+P P
Sbjct: 487 NQLRMQQQAAQAGLPQYMQPPVYYPGQQPGFLPPAAGRGMPFPQGALGMPPVQGGRPGQF 546
Query: 412 ----------SVPPRMPMYPPG------PSGLGQQFLYGQAP------------------ 437
++PP++PMYP G P QFL
Sbjct: 547 PPYPQQAGRGTIPPQVPMYPIGQFPGAYPQPNNPQFLAAMQQVQQAAALAGGRGAPAGRG 606
Query: 438 -PAIIPPQ---------MPPRGHAYRYPLGR----NMQDFPFDMGAGSMLPVPVDMGAGI 483
P + PQ PP G LGR N +FP GA P+ G+
Sbjct: 607 VPTVPIPQGIQAPGLAGYPPNGRPQNGNLGRGAGPNRSNFPAGRGAPPAGPL------GV 660
Query: 484 PRRDASVGQPMPITALSTALA-NASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMD 542
P G+ P L + LA +P+QQ+ +LGE+L+P V+ L+ + A K+TGMLLEMD
Sbjct: 661 P------GELSPAALLQSQLAATTNPQQQKQILGENLFPKVQALQPELAGKITGMLLEMD 714
Query: 543 QTEVLHLLESPEALKAKVAEAMEV 566
E+++L+E AL AKV EAM V
Sbjct: 715 NQELINLIEDEAALVAKVNEAMAV 738
>gi|336276750|ref|XP_003353128.1| hypothetical protein SMAC_03445 [Sordaria macrospora k-hell]
gi|380092612|emb|CCC09889.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 754
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 269/658 (40%), Positives = 382/658 (58%), Gaps = 121/658 (18%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVG+LD +VT++ L++LFSQ+G V S+RVCRD TRRSLGY YVNY AD +AL
Sbjct: 60 SASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTADGEKAL 119
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LN+T + + RIM+S RDP++RK+G GNIFIKNLD +ID+KALHDTF++FGNILSCK
Sbjct: 120 EELNYTLIKGRPCRIMWSQRDPALRKTGAGNIFIKNLDAAIDNKALHDTFAAFGNILSCK 179
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKT 206
+A D G SKG+GFV +E E+A AI +NGML+N+K+V+VGH + K++R++ +K
Sbjct: 180 VAQDEHGNSKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKDRQSKFEEMKA 239
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
F NV+VKN++ TD++ +++F ++G +TS+ + RD +GK++ FGFVNF + AAKAV
Sbjct: 240 NFTNVYVKNINHEVTDDEFRELFEKFGEVTSSSLARDQEGKTRGFGFVNFTTHEAAAKAV 299
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
+ LNGK F ++ YVG+AQKK ERE+EL+ +E A E +K+QG+NLYIKNLGD +DDE
Sbjct: 300 DDLNGKDFRGQDLYVGRAQKKHEREEELRRSYEAARLEKANKYQGVNLYIKNLGDDVDDE 359
Query: 327 KLKELFSEFGTITSCKVMRDP--------------------------------------- 347
KL+ +FSE+G ITS KVMRD
Sbjct: 360 KLRAMFSEYGPITSAKVMRDSLIEGEEKDEKDKENKKEGETKEEEEKEGSAEKKTEKKGD 419
Query: 348 --SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFS--- 402
G SKG GFV FS P++A++A+ EMN +M+ KPLYVA+AQRK+ R+++L+A
Sbjct: 420 RKLGKSKGFGFVCFSNPDDATKAVTEMNQRMVDGKPLYVALAQRKDVRKSQLEASIQARN 479
Query: 403 --QMRPVAMGPSVPP-----------RMPMYPPGPSGLG---------------QQFLYG 434
+M+ A +P + P + P P G G Q+ Y
Sbjct: 480 QLRMQQAAAQAGMPQQYMQAPVYYAGQQPGFMPAPGGRGVPFPQGGIPVQGGRPGQYPYQ 539
Query: 435 QAPPAIIPP-QMPPRGHA---------------YRYPLGR--------------NMQDFP 464
Q +PP QMPP G+ Y +G+ Q P
Sbjct: 540 QGGRGGVPPQQMPPMGYPINQFGPGAFPPNTPQYMAAMGQVGALGGGRGGPAGRGPQGIP 599
Query: 465 FDMGAGSMLPVPVDMGA-GIPRRDASV-----------GQPMPITA---LSTALANA-SP 508
+ G + P + G G PR +A+ G P ++A L LA P
Sbjct: 600 AGIPQG-LQGAPANGGGRGTPRGNANFMAAGRGASPVPGAPADLSAGSFLQAQLATTQDP 658
Query: 509 EQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEV 566
+ Q+ ++GE+L+P ++ ++ A K+TGMLLEMD E+++L E AL KV EA+ V
Sbjct: 659 QAQKQIIGENLFPKIQAIQPALAGKITGMLLEMDNAELINLFEDDNALNVKVQEALAV 716
>gi|320581683|gb|EFW95902.1| Poly(A) binding protein [Ogataea parapolymorpha DL-1]
Length = 629
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 265/605 (43%), Positives = 376/605 (62%), Gaps = 61/605 (10%)
Query: 20 AGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYA 79
A ++ N SLYVG+LD +VT+S L+++FS +GQV ++RVCRD +++SLGY YVN+
Sbjct: 37 AESTQNSETLASLYVGELDPSVTESDLFEVFSPIGQVSTIRVCRDAVSKQSLGYAYVNFQ 96
Query: 80 NPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFS 139
+ AD +AL+ LN+TP+ K+ RIM+S RDPS+R++G+GNIFIKNL +ID+K LHDTFS
Sbjct: 97 SHADGEKALEELNYTPIKGKACRIMWSQRDPSLRRNGSGNIFIKNLHPAIDNKTLHDTFS 156
Query: 140 SFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER 199
+FG ILSCKIATD +G SKGFGFV +E ESA+ AI+ +NGML+ND +V+VG L K++R
Sbjct: 157 AFGKILSCKIATDENGNSKGFGFVHYEESESAKAAIENVNGMLLNDHEVYVGPHLAKKDR 216
Query: 200 ETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFE 257
++ + F NV+VKN++ + ++ L++ F +GTI+S + +D GKS+ FGFVNFE
Sbjct: 217 QSKMRELIANFTNVYVKNINLNWDEDKLRETFSPFGTISSIFLSKDESGKSRGFGFVNFE 276
Query: 258 NADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIK 317
+DA KAVE LN K D ++ YVG+AQKKSER + LK Q+E A +E ++K+QG NL++K
Sbjct: 277 KHEDAVKAVEELNNKDIDGQKLYVGRAQKKSERMESLKHQYEAARQEQLNKYQGYNLFVK 336
Query: 318 NLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMI 377
NL DSIDD KL+E F +GTITS KVM D +G SKG GFV +S+PEEA++A+ EM+ +M+
Sbjct: 337 NLDDSIDDAKLEEEFKPYGTITSAKVMLDDAGKSKGFGFVCYSSPEEATKAITEMHQRMV 396
Query: 378 VSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQ---QFLYG 434
KPLYVA+AQRKE RR++L Q + M + G+GQ YG
Sbjct: 397 AGKPLYVALAQRKEVRRSQLSQQIQARNQMRMQQAA---------AQGGMGQFVAPMFYG 447
Query: 435 QAPPAIIPPQMPPRGHAYRYPLG---------RNMQDFP-----FDMGAGSMLPVPVDM- 479
Q P +PP RG + P R Q P F +G PVP+ M
Sbjct: 448 QN-PGFLPPGA--RGAPFAAPGQQMMMQQGMPRPGQGVPVSPGQFRVGPNGQ-PVPMYMQ 503
Query: 480 --------GAGIPR----RDASVGQPMP------------ITALSTALANASPEQQRTLL 515
+P+ + GQ P + +L+ L PEQQ+ +L
Sbjct: 504 PVFNEYPQNGRLPQQRYYQGGRPGQQPPQAGPRGKREDGAVPSLAQVLPQFPPEQQKRML 563
Query: 516 GESLYPLV----EQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVA 571
GE LYPL+ + + +AA K+TGM+LEMD ++L LLE + ++ EA+
Sbjct: 564 GEELYPLIVATGKAQDPEAAGKITGMMLEMDNQQILALLEDRDLFNSQFEEALSAYEEYK 623
Query: 572 QQQAN 576
++A+
Sbjct: 624 NKEAS 628
>gi|443895761|dbj|GAC73106.1| polyadenylate-binding protein [Pseudozyma antarctica T-34]
Length = 556
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 261/545 (47%), Positives = 363/545 (66%), Gaps = 53/545 (9%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
TSLYVG+LD +VT++ L+++F+ +G V S+RVCRD TRRSLGY YVN+ N AD RA++
Sbjct: 46 TSLYVGELDPSVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNFLNAADGERAME 105
Query: 90 VLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKI 149
LN++ + N+ RIM+S RDP++R++G GNIFIKNLD ID+KALHDTF++FGNILSCK+
Sbjct: 106 QLNYSLIRNRPCRIMWSQRDPALRRTGQGNIFIKNLDAGIDNKALHDTFAAFGNILSCKV 165
Query: 150 ATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTK 207
AT SG S G+GFV +E E+A AI +NGML+NDK+V+VGH + ++ER+ + +
Sbjct: 166 ATSESG-SLGYGFVHYETAEAADAAIKHVNGMLLNDKKVYVGHHIPRKERQAKIEESRAR 224
Query: 208 FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVE 267
F NV+ KN+D TDE+ +K+F +YG ITS V+ RD DGKSK FGFVNFEN D+A AV+
Sbjct: 225 FTNVYCKNVDADVTDEEFEKLFTKYGKITSCVLQRDEDGKSKGFGFVNFENHDEAQTAVD 284
Query: 268 ALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEK 327
L+ F ++ +V +AQKKSERE+EL+ +E A E + KFQG+NLY+KN+ +S DDE+
Sbjct: 285 ELHDSDFKGQKLFVARAQKKSEREEELRRSYEAAKNEKLAKFQGVNLYLKNIPESYDDER 344
Query: 328 LKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 387
L++ F+ FG ITSCK+MR PSG+S+G GFV +S PEEA++A++EMNGKM+ ++PLYVA+A
Sbjct: 345 LRDEFAPFGAITSCKIMRAPSGVSRGFGFVCYSAPEEANKAVSEMNGKMLDNRPLYVALA 404
Query: 388 QRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPPQMPP 447
QRK+ RR +L+AQ Q + + + G+G
Sbjct: 405 QRKDVRRQQLEAQIMQRNQLRLQQQAAAQ---------GMG------------------- 436
Query: 448 RGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALSTALANAS 507
YP G G P P P + +G P + ALA AS
Sbjct: 437 ------YP------------GPGMYYPQP----GAFPGQPGGMGDEAPGALTAAALAKAS 474
Query: 508 PEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVL 567
P++Q+ +LGE++YP V + + A K+TGM+LE+ TE+LHLLE EAL AKV+EA+EVL
Sbjct: 475 PDEQKQMLGEAIYPKVAASQPELAGKLTGMILELPVTELLHLLEESEALDAKVSEALEVL 534
Query: 568 RSVAQ 572
+ Q
Sbjct: 535 KEYQQ 539
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 1/100 (1%)
Query: 291 EQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP-SG 349
EQ G EQA + +LY+ L S+ + L E+F+ G + S +V RD +
Sbjct: 25 EQPAAGNGEQANRNADAAANNTSLYVGELDPSVTEAMLFEIFNMIGPVASIRVCRDAVTR 84
Query: 350 ISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQR 389
S G +V F + RA+ ++N +I ++P + +QR
Sbjct: 85 RSLGYAYVNFLNAADGERAMEQLNYSLIRNRPCRIMWSQR 124
>gi|301125993|ref|XP_002909814.1| polyadenylate-binding protein, putative [Phytophthora infestans
T30-4]
gi|262103703|gb|EEY61755.1| polyadenylate-binding protein, putative [Phytophthora infestans
T30-4]
Length = 587
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 281/592 (47%), Positives = 365/592 (61%), Gaps = 72/592 (12%)
Query: 41 VTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKS 100
V+ ++ VG V S+RVCRD TRRSLGY YVN+ N ADA RALD +NFT +
Sbjct: 2 VSSVGVFYKIKAVGPVASIRVCRDAVTRRSLGYAYVNFHNVADAERALDTMNFTSIKGVP 61
Query: 101 IRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATD-GSGQSKG 159
RIM+S RDPS+RKSG GNIF+KNLD SID+KAL+DTFS FGNILSCK+A + +G SKG
Sbjct: 62 CRIMWSQRDPSLRKSGVGNIFVKNLDTSIDNKALYDTFSLFGNILSCKVAIEHTTGNSKG 121
Query: 160 FGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDES 219
+G+V +E E+A AI K+NGMLI +VFVGHF ++Q+R + N +VKN+
Sbjct: 122 YGYVHYETAEAATEAIAKINGMLIAGTEVFVGHFQKRQDRPDA---DDWTNCYVKNIPTQ 178
Query: 220 TTDEDLKKIFGEYGTITSAVVMRDGDG--KSKCFGFVNFENADDAAKAVEALNGKKFD-- 275
TD DL K F +G + SAVVM+D ++ FGFVN+E +D A KAV+ALNGK +
Sbjct: 179 WTDADLLKEFEPFGKVLSAVVMKDNANPDHNRGFGFVNYEESDAAHKAVDALNGKSYPAG 238
Query: 276 ---DREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELF 332
D E YVGKAQK+SERE+EL+ +FEQ E ++K+QG+NLY+KNL D + D++L+E F
Sbjct: 239 EGLDTEMYVGKAQKRSERERELRNKFEQLKMERINKYQGVNLYVKNLDDQLSDDELREAF 298
Query: 333 SEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEE 392
+E GTITS +VMRDP+G S+G GFV FSTPEEA++A+AEMNGK+I KP+YVA+AQRKE
Sbjct: 299 AECGTITSSRVMRDPNGNSRGFGFVCFSTPEEANKAVAEMNGKLISGKPVYVALAQRKEV 358
Query: 393 RRARLQAQFSQMRP-VAMGPSVP-PRMPMYPPGPSGLGQQFLYGQAPPA-----IIPPQM 445
RRA+L+AQ +Q R + +G +P + PMY P GQ GQ PP + P QM
Sbjct: 359 RRAQLEAQHAQQRAGMVVGRGMPMGQPPMYGAAPMFYGQP---GQLPPQARQGFMYPQQM 415
Query: 446 PPRG-------HAYRYPLGRNMQDFPFDM--------------------GAGSMLPVPVD 478
PRG + R P +P AGS+ +
Sbjct: 416 MPRGVQRGPMPYGARVPGAPAPGGYPMPWLRHAHAAAAWPAASWPSGPRPAGSLRALRPT 475
Query: 479 MG--------AGIPRRDASVGQPMPITALSTALANASPEQ-------------QRTLLGE 517
A P RD MP A + NA PE Q+ ++GE
Sbjct: 476 AATSSTRLTPATTPARDVPPQGVMPPAA---PVQNAGPEPLTSAALAAASPEIQKNMIGE 532
Query: 518 SLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRS 569
LYPL+ + + + A K+TGMLLEMD E+LHLLESPEAL+AK+ EAM VL +
Sbjct: 533 RLYPLIHRQQPELAGKITGMLLEMDNGELLHLLESPEALEAKIQEAMTVLEA 584
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 96/291 (32%), Positives = 151/291 (51%), Gaps = 22/291 (7%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
+++V +LD ++ + LYD FS G +LS +V + +T S GYGYV+Y A A+
Sbjct: 80 NIFVKNLDTSIDNKALYDTFSLFGNILSCKVAIEHTTGNSKGYGYVHYETAEAATEAIAK 139
Query: 91 LNFTPLNNKSIRI-MYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKI 149
+N + + + + R N ++KN+ L F FG +LS +
Sbjct: 140 INGMLIAGTEVFVGHFQKRQDRPDADDWTNCYVKNIPTQWTDADLLKEFEPFGKVLSAVV 199
Query: 150 ATDGSG--QSKGFGFVQFENKESAQNAIDKLNGMLIN-----DKQVFVGHFLRKQERETV 202
D + ++GFGFV +E ++A A+D LNG D +++VG ++ ERE
Sbjct: 200 MKDNANPDHNRGFGFVNYEESDAAHKAVDALNGKSYPAGEGLDTEMYVGKAQKRSERER- 258
Query: 203 AIKTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSK 249
++ KF N++VKNLD+ +D++L++ F E GTITS+ VMRD +G S+
Sbjct: 259 ELRNKFEQLKMERINKYQGVNLYVKNLDDQLSDDELREAFAECGTITSSRVMRDPNGNSR 318
Query: 250 CFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQ 300
FGFV F ++A KAV +NGK + YV AQ+K R +L+ Q Q
Sbjct: 319 GFGFVCFSTPEEANKAVAEMNGKLISGKPVYVALAQRKEVRRAQLEAQHAQ 369
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 92/192 (47%), Gaps = 22/192 (11%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRD-LSTRRSLGYGYVNYANPADAARAL 88
T+ YV ++ TD+ L F G+VLS V +D + + G+G+VNY A +A+
Sbjct: 168 TNCYVKNIPTQWTDADLLKEFEPFGKVLSAVVMKDNANPDHNRGFGFVNYEESDAAHKAV 227
Query: 89 DVLNFT--PLNNKSIRIMY-------SHRDPSIR------------KSGTGNIFIKNLDK 127
D LN P MY S R+ +R K N+++KNLD
Sbjct: 228 DALNGKSYPAGEGLDTEMYVGKAQKRSERERELRNKFEQLKMERINKYQGVNLYVKNLDD 287
Query: 128 SIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQ 187
+ L + F+ G I S ++ D +G S+GFGFV F E A A+ ++NG LI+ K
Sbjct: 288 QLSDDELREAFAECGTITSSRVMRDPNGNSRGFGFVCFSTPEEANKAVAEMNGKLISGKP 347
Query: 188 VFVGHFLRKQER 199
V+V RK+ R
Sbjct: 348 VYVALAQRKEVR 359
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
N++ +LYV +LD ++D +L + F++ G + S RV RD S G+G+V ++ P +A
Sbjct: 273 NKYQGVNLYVKNLDDQLSDDELREAFAECGTITSSRVMRD-PNGNSRGFGFVCFSTPEEA 331
Query: 85 ARALDVLNFTPLNNKSIRIMYSHR 108
+A+ +N ++ K + + + R
Sbjct: 332 NKAVAEMNGKLISGKPVYVALAQR 355
>gi|330793331|ref|XP_003284738.1| RNA-binding region-containing protein (RNP-1) [Dictyostelium
purpureum]
gi|325085338|gb|EGC38747.1| RNA-binding region-containing protein (RNP-1) [Dictyostelium
purpureum]
Length = 565
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 270/574 (47%), Positives = 357/574 (62%), Gaps = 49/574 (8%)
Query: 28 LTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARA 87
+++SLYVGDL V++ L+++F+QVG V ++RVCRD +TRRSL Y YVNY N ADA RA
Sbjct: 8 ISSSLYVGDLLPEVSEQTLFEVFNQVGLVSNIRVCRDTNTRRSLSYAYVNYYNAADAERA 67
Query: 88 LDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSC 147
LD LN TP+ K RIM+S RDPS+RKSG GN+FIKNLDK IDHKAL+DTFS+FGNILSC
Sbjct: 68 LDTLNNTPIRGKPCRIMWSQRDPSLRKSGVGNVFIKNLDKGIDHKALYDTFSAFGNILSC 127
Query: 148 KIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK 207
K+ TD + SKGFGFV +E+++SA AI K+NGM+IN ++VFVG F +ER + K
Sbjct: 128 KVVTDDNNSSKGFGFVHYESQDSADKAIAKVNGMMINGQKVFVGPFKSSKERGQ-PTEIK 186
Query: 208 FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD-GDGKSKCFGFVNFENADDAAKAV 266
F NVF KNL E T + LK++ YGTIT+ +M D GKSK F F NFE+AD A V
Sbjct: 187 FTNVFFKNLAEDVTSDQLKELLAPYGTITNVAIMLDEKTGKSKGFAFANFESADAAKNVV 246
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
E NGK F + Y G+AQKK ERE ELK FE K+QG+NLYIKN+ DSID++
Sbjct: 247 EIENGKVFHGKPLYAGRAQKKIEREAELKHTFET-------KYQGVNLYIKNIDDSIDND 299
Query: 327 KLKELFSEFGTITSCKVMR-DPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVA 385
KL+E+FS+FGTITS VM+ D + SKG GFV +++P+EA+RA+ EMNG+MI +KPLYVA
Sbjct: 300 KLREVFSQFGTITSAVVMKDDKATTSKGFGFVCYTSPDEATRAVTEMNGRMIGTKPLYVA 359
Query: 386 VAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAP--PAIIPP 443
+AQRK+ RRA+L+ Q Q M ++ P Y GP + AP PA++
Sbjct: 360 LAQRKDIRRAQLEMQHQQKFKAGMRQTM---APAYSGGP------VFFTPAPVTPAVVYQ 410
Query: 444 QMPPRGHAYR-YPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRR---------------- 486
QM PR + P+G + + G P P PR
Sbjct: 411 QMMPRPRNWNGAPVGVPGNQYGMNYVRGGGQPRPNGQRPTGPRPNGQRPDSAQPIATQQP 470
Query: 487 --DASVGQPMPIT--------ALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTG 536
D + QP + LS+ LA + +QQ LGE LYPL+ + + A K+TG
Sbjct: 471 AVDQATQQPQAASGASQEAAPTLSSILALPTRDQQNVALGELLYPLIHNSQPELAGKITG 530
Query: 537 MLLE-MDQTEVLHLLESPEALKAKVAEAMEVLRS 569
MLL+ + E+ L + + L K+ EA++VL +
Sbjct: 531 MLLDSLPVEELFALTQRSDLLNEKIKEAIDVLNA 564
>gi|241831489|ref|XP_002414860.1| apoptosis-promoting RNA-binding protein TIA-1/TIAR, putative
[Ixodes scapularis]
gi|215509072|gb|EEC18525.1| apoptosis-promoting RNA-binding protein TIA-1/TIAR, putative
[Ixodes scapularis]
Length = 686
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 232/416 (55%), Positives = 307/416 (73%), Gaps = 14/416 (3%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
SG + SLYVGDL VT++ L++ FS G VLS+RVCRD+ TRRSLGY YVN+ PA
Sbjct: 4 SGPNYPMASLYVGDLHPEVTEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPA 63
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
DA RALD +NF + NK IRIM+S RDPS+RKSG GN+FIKNLDK+ID+KA++DTFS+FG
Sbjct: 64 DAERALDTMNFDAIKNKPIRIMWSQRDPSLRKSGVGNVFIKNLDKTIDNKAMYDTFSAFG 123
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET- 201
NILSC++ATD SKG+GFV FE +E+A AI K+NGML+N+K+V+VG F+ ++ERE
Sbjct: 124 NILSCRVATDEEAASKGYGFVHFETEEAANKAISKVNGMLLNNKKVYVGKFIPRKEREKM 183
Query: 202 VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
+ K + F NV++KN + D+ L IF +YG ITSA VM D GK++ FGFV+FE D
Sbjct: 184 LGDKARCFTNVYIKNFGDELDDDKLLVIFEKYGKITSAKVMTDDSGKNRGFGFVSFEEPD 243
Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
A +AVE LNGK R YVG+AQKK+ER+ ELK FEQ +E ++++QG+NLY+KNL
Sbjct: 244 SAERAVEELNGKDMGGRPLYVGRAQKKAERQSELKRHFEQLKQERLNRYQGVNLYVKNLD 303
Query: 321 DSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSK 380
D++DDE+L++ F FG ITS KVM D +G SKG GFV FS+PEEA++A+ EMNG+++VSK
Sbjct: 304 DALDDERLRKEFGPFGNITSAKVMTDANGRSKGFGFVCFSSPEEATKAVTEMNGRIVVSK 363
Query: 381 PLYVAVAQRKEERRARLQAQFSQ----MRPVAMGPSVPPRMPMYPPGPSGLGQQFL 432
PLYVA+AQRKE+R+A L +Q+ MR + MG M+PPG +G+ F+
Sbjct: 364 PLYVALAQRKEDRKAHLASQYMHRIAGMR-MQMG-------QMFPPGGTGVANYFV 411
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 104/299 (34%), Positives = 170/299 (56%), Gaps = 17/299 (5%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFEN 167
+PS ++++ +L + L + FS+ G +LS ++ D + +S G+ +V F+
Sbjct: 2 NPSGPNYPMASLYVGDLHPEVTEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
A+ A+D +N I +K + + +R+ K+ NVF+KNLD++ ++ +
Sbjct: 62 PADAERALDTMNFDAIKNKPIRI----MWSQRDPSLRKSGVGNVFIKNLDKTIDNKAMYD 117
Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
F +G I S V D + SK +GFV+FE + A KA+ +NG ++++ YVGK +
Sbjct: 118 TFSAFGNILSCRVATDEEAASKGYGFVHFETEEAANKAISKVNGMLLNNKKVYVGKFIPR 177
Query: 288 SEREQELKGQFEQAMKETVDKFQGL-NLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRD 346
ERE+ L DK + N+YIKN GD +DD+KL +F ++G ITS KVM D
Sbjct: 178 KEREKMLG-----------DKARCFTNVYIKNFGDELDDDKLLVIFEKYGKITSAKVMTD 226
Query: 347 PSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
SG ++G GFV+F P+ A RA+ E+NGK + +PLYV AQ+K ER++ L+ F Q++
Sbjct: 227 DSGKNRGFGFVSFEEPDSAERAVEELNGKDMGGRPLYVGRAQKKAERQSELKRHFEQLK 285
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 57/75 (76%), Gaps = 2/75 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A+P Q+ +LGE L+PL+ ++ D A K+TGMLLE+D +E+LH+LE E
Sbjct: 599 PLTA--SMLAEATPHDQKQMLGERLFPLIHRMYPDLAGKITGMLLEIDNSELLHMLEHHE 656
Query: 555 ALKAKVAEAMEVLRS 569
+LKAKV EA+ VL++
Sbjct: 657 SLKAKVEEAVAVLQA 671
>gi|6754972|ref|NP_035163.1| poly A binding protein, cytoplasmic 2 [Mus musculus]
gi|473092|emb|CAA53572.1| polyA binding protein, testis-enriched isoform [Mus musculus]
gi|29835142|gb|AAH51134.1| Poly(A) binding protein, cytoplasmic 2 [Mus musculus]
gi|148678113|gb|EDL10060.1| poly A binding protein, cytoplasmic 2 [Mus musculus]
Length = 628
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 268/607 (44%), Positives = 369/607 (60%), Gaps = 78/607 (12%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL +VT++ LY+ FS G +LS+RV RD+ TRRSLGY VN+ PADA RALD
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSSAGPILSIRVYRDVITRRSLGYASVNFEQPADAERALDT 71
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF + K +RIM+S RDPS+R+SG GN+FIKNL+K+ID+KAL+DTFS+FGNILSCK+
Sbjct: 72 MNFDVIKGKPVRIMWSQRDPSLRRSGVGNVFIKNLNKTIDNKALYDTFSAFGNILSCKVV 131
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET-VAIKTK-F 208
+D +G SKG GFV FE +E+A+ AI+K+NGML+ND++VFVG F ++ERE + TK F
Sbjct: 132 SDENG-SKGHGFVHFETEEAAERAIEKMNGMLLNDRKVFVGRFKSQKEREAELGTGTKEF 190
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NV++KN + DE L +FG +G I S VM D GKSK FGFV+FE +DA KAV+
Sbjct: 191 TNVYIKNFGDRMDDETLNGLFGRFGQILSVKVMTDEGGKSKGFGFVSFERHEDAQKAVDE 250
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
+NGK+ + + YVG+AQKK +R ELK +FEQ ++ ++QG+NLY+KNL D IDDE+L
Sbjct: 251 MNGKELNGKHIYVGRAQKKDDRHTELKHKFEQVTQDKSIRYQGINLYVKNLDDGIDDERL 310
Query: 329 KELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
++ FS FGTITS KVM + G SKG GFV FS+PEEA++A++EMNG+++ +KPLYVA+AQ
Sbjct: 311 QKEFSPFGTITSTKVMTE-GGRSKGFGFVCFSSPEEATKAVSEMNGRIVATKPLYVALAQ 369
Query: 389 RKEERRARLQAQFSQ-MRPVAMGP----------------SVPPRMPMYPPGPSGLGQ-- 429
RKEER+A L Q+ Q M V GP +VP P PS + Q
Sbjct: 370 RKEERQAHLTNQYIQRMASVRSGPNPVNPYQPASSSYSVAAVPQTQNCVPCCPSQIAQPR 429
Query: 430 ----QFLYGQAP------PAIIPPQMPPRGHAYRYPLGRNMQ----------------DF 463
G P P I P P P ++Q
Sbjct: 430 PSARWIAQGSRPHPFPNVPGAIHPAAPRSSLTTVRPSSSHVQVTTAHRITNTSAQITGQR 489
Query: 464 PFDMGAGSMLPVPVDMGAGIPRRDASVG--------------QPM-------PITALSTA 502
P + + PV IP+ + G QP P TA +
Sbjct: 490 PAPASSATATPV-----HSIPQYKYAAGVQNSQQHLNAQLAQQPAVCIQGQEPWTA---S 541
Query: 503 LANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAE 562
+ +P++ + +LGE L+PL++ + A K+TGMLL++D +E L +LESP + ++ E
Sbjct: 542 MLVTAPQEPKQMLGERLFPLIQAMHPTLAGKITGMLLDIDNSEPLRMLESPVSRCSRAEE 601
Query: 563 AMEVLRS 569
A+ L++
Sbjct: 602 AVATLQA 608
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 104/188 (55%), Gaps = 20/188 (10%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
T++Y+ + + D L LF + GQ+LSV+V D +S G+G+V++ DA +A+D
Sbjct: 191 TNVYIKNFGDRMDDETLNGLFGRFGQILSVKVMTD-EGGKSKGFGFVSFERHEDAQKAVD 249
Query: 90 VLNFTPLNNKSIRIMYSHR-----------------DPSIRKSGTGNIFIKNLDKSIDHK 132
+N LN K I + + + D SIR G N+++KNLD ID +
Sbjct: 250 EMNGKELNGKHIYVGRAQKKDDRHTELKHKFEQVTQDKSIRYQGI-NLYVKNLDDGIDDE 308
Query: 133 ALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGH 192
L FS FG I S K+ T+G G+SKGFGFV F + E A A+ ++NG ++ K ++V
Sbjct: 309 RLQKEFSPFGTITSTKVMTEG-GRSKGFGFVCFSSPEEATKAVSEMNGRIVATKPLYVAL 367
Query: 193 FLRKQERE 200
RK+ER+
Sbjct: 368 AQRKEERQ 375
>gi|432102762|gb|ELK30241.1| Polyadenylate-binding protein 1-like protein [Myotis davidii]
Length = 603
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 262/565 (46%), Positives = 361/565 (63%), Gaps = 46/565 (8%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
ASG F SLYVGDL +VT++ LY+ FS G +LS+RVCRD++TRRSLGY Y+N+ P
Sbjct: 3 ASGPGFPLASLYVGDLHPDVTEAMLYEKFSLAGPILSIRVCRDVATRRSLGYAYINFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA ALD +NF + + IRIM+S RDP +RKSG GNIFIKNL++SID+KAL+DTFS+F
Sbjct: 63 ADAELALDTMNFEVIKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEESIDNKALYDTFSTF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D G S+GFGFV FE +E+AQ AI +NGML+N+++VFV HF +QERE
Sbjct: 123 GNILSCKVVCDDHG-SRGFGFVHFETREAAQQAISTMNGMLLNNRKVFVSHFKSRQEREA 181
Query: 202 -VAIKT-KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ ++ +F NV+VKNL ++ L+++F ++G S VMRD G S+ FGFVNFE
Sbjct: 182 ELGVRAMEFTNVYVKNLQMDIDEQGLEELFSQFGKTLSVKVMRDDSGHSRGFGFVNFEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQA--MKE-TVDKFQGLNLYI 316
++A KAV +NGK+ + YVG+AQK +ER+ ELK +F+Q MK+ ++ +QG+NLY+
Sbjct: 242 EEAQKAVMDMNGKEVRGQLLYVGRAQKWAERQNELKRKFQQMKQMKQDRLNHYQGVNLYV 301
Query: 317 KNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKM 376
KNL DSID+E+L++ FS +G ITS KVM + G SKG GFV FS+PEEA++A+ EMNG +
Sbjct: 302 KNLDDSIDNERLRKEFSPYGVITSAKVMTE-GGHSKGFGFVCFSSPEEATKAVTEMNGCI 360
Query: 377 IVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQA 436
+ +KPLYVA+AQRK+ER+A L QF Q R + P + + Q
Sbjct: 361 LGTKPLYVALAQRKDERKAILTNQFMQQRLSNVWALGGPHLGSF--------------QQ 406
Query: 437 PPAIIPPQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGA--------------- 481
P + P + P+ A P + Q+ F L +P G
Sbjct: 407 PVSYFLPTV-PQVRACLQPDSQVEQEESFKANIVPRLLLPETAGGFHPVSKRADENPSLR 465
Query: 482 GIPRRDASVGQPM-------PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKV 534
PR V +P P+T + LA A +Q+ ++GE LYPL+ + A K+
Sbjct: 466 MCPRHHVQVQEPAVCIPGQEPLTV--SMLAAAPLHKQKQMIGERLYPLIYNVHTQLAGKI 523
Query: 535 TGMLLEMDQTEVLHLLESPEALKAK 559
TGMLLE+D +E+L +LESPE+L AK
Sbjct: 524 TGMLLEIDNSELLFMLESPESLNAK 548
>gi|47933430|gb|AAT39343.1| polyadenylate binding protein [Oikopleura dioica]
Length = 610
Score = 473 bits (1218), Expect = e-130, Method: Compositional matrix adjust.
Identities = 267/611 (43%), Positives = 370/611 (60%), Gaps = 84/611 (13%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL ++T++ LYD F G VLS+RVCRD+ TRRSLGY YVN+ PADA RALD
Sbjct: 3 SLYVGDLHPDITEAMLYDKFQASGPVLSIRVCRDMVTRRSLGYAYVNFQQPADAERALDT 62
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF + K IRIM+S RDPS+R+SG GN+FIKNLD+SID+KAL+DTFSSFGNILSCK+
Sbjct: 63 MNFDVIKGKPIRIMWSQRDPSLRRSGQGNVFIKNLDRSIDNKALYDTFSSFGNILSCKVV 122
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER--ETVAIKTKF 208
D +G SKGFGFV +E+ ESAQ AI+K+NGML+ DK+VFV F + +R E F
Sbjct: 123 CDING-SKGFGFVHYESDESAQRAIEKVNGMLMEDKKVFVARFKSRNDRMREFGDAAKHF 181
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITS-AVVMRDGDGKSKCFGFVNFENADDAAKAVE 267
N+FVKNL +S + L K F ++G + S V+ + G SKC GF++F+ D A AVE
Sbjct: 182 TNLFVKNLPDSWDTDALLKNFEQFGEVVSHKVICDETTGLSKCHGFISFKEHDQAEAAVE 241
Query: 268 ALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEK 327
++ K+ + ++ Y G+AQKK+ER ELK ++E+ +E + ++QG+NLY+KNL DSIDDE
Sbjct: 242 IMHEKEIEGKKLYCGRAQKKAERSSELKAKYEKIKQERIQRYQGVNLYVKNLDDSIDDEG 301
Query: 328 LKELFSEFGTITSCKVMRD----------------------------------------- 346
L+E F +FG ITS KV+ D
Sbjct: 302 LREAFKQFGNITSAKVITDLNEKDEVGQAKSDQAPEEEGEAVEEKKTEDSEAAGDAPGPE 361
Query: 347 ----PSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFS 402
G SKG GFV FS+PEEA++A+ EMNG++ KPLYV +AQRKE+R+A LQ Q+
Sbjct: 362 KPVSKKGRSKGFGFVCFSSPEEATKAVTEMNGRIFGGKPLYVGLAQRKEDRKAHLQQQY- 420
Query: 403 QMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPP------QMPPRGHAY---- 452
M+ V+ G + M G + Q F Q P I+P QM P+G
Sbjct: 421 -MQRVSTGIRMQAFM-----GNQVVNQNF---QPPRYILPTMQGQPVQMFPQGTPMVRAT 471
Query: 453 -RYPLGRNMQDFPFDMGAGSMLPVP-------------VDMGAGIPRRDASVGQPMPITA 498
R+ ++ + + +L P + M +P ++ G P T
Sbjct: 472 PRWAPPNQVRHIVYQSHSQQILASPDARVRNVQIPSEVIQMPPQMPHQNQPAGDQAPETL 531
Query: 499 LSTALANASPEQQRTLLGESLYPLVEQL-ERDAAAKVTGMLLEMDQTEVLHLLESPEALK 557
S+ LANA+P++Q+ +LGE L+PL++ + D A K+TGMLLE+D +E+LH+L++ E LK
Sbjct: 532 TSSMLANANPQEQKQMLGERLFPLIQSMAATDLAGKITGMLLEIDNSELLHMLDNRELLK 591
Query: 558 AKVAEAMEVLR 568
+KV EA+ VL+
Sbjct: 592 SKVDEAVLVLK 602
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 98/232 (42%), Gaps = 61/232 (26%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
T+L+V +L + L F Q G+V+S +V D +T S +G++++ A A++
Sbjct: 182 TNLFVKNLPDSWDTDALLKNFEQFGEVVSHKVICDETTGLSKCHGFISFKEHDQAEAAVE 241
Query: 90 VLNFTPLNNKSIRIMYSHRDPS----------------IRKSGTGNIFIKNLDKSIDHKA 133
+++ + K + + + I++ N+++KNLD SID +
Sbjct: 242 IMHEKEIEGKKLYCGRAQKKAERSSELKAKYEKIKQERIQRYQGVNLYVKNLDDSIDDEG 301
Query: 134 LHDTFSSFGNILSCKIATD----------------------------------------- 152
L + F FGNI S K+ TD
Sbjct: 302 LREAFKQFGNITSAKVITDLNEKDEVGQAKSDQAPEEEGEAVEEKKTEDSEAAGDAPGPE 361
Query: 153 ----GSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERE 200
G+SKGFGFV F + E A A+ ++NG + K ++VG RK++R+
Sbjct: 362 KPVSKKGRSKGFGFVCFSSPEEATKAVTEMNGRIFGGKPLYVGLAQRKEDRK 413
>gi|332030568|gb|EGI70256.1| Polyadenylate-binding protein 1 [Acromyrmex echinatior]
Length = 678
Score = 473 bits (1217), Expect = e-130, Method: Compositional matrix adjust.
Identities = 287/677 (42%), Positives = 391/677 (57%), Gaps = 142/677 (20%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPAD------- 83
SLYVGDL ++T++ L++ FS G VLS+RVCRD+ TRRSLGY YVN+ PAD
Sbjct: 12 SLYVGDLHTDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADVVVNVVT 71
Query: 84 ------------------------------------AARALDVLNFTPLNNKSIRIMYSH 107
A RALD +NF + + IRIM+S
Sbjct: 72 QRGFTRMAACVPHTCLANVPTIVPTMLDPRPHSTVNAERALDTMNFDMIKGRPIRIMWSQ 131
Query: 108 RDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFEN 167
RDPS+RKSG GN+FIKNLDK+ID+KA++DTFS+FGNILSCK+A D SG SKG+GFV FE
Sbjct: 132 RDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDESGASKGYGFVHFET 191
Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERET-VAIKTK-FNNVFVKNLDESTTDEDL 225
+E+A +IDK+NGML+N K+V+VG F+ ++ERE + K K F NV+VKN E T++ L
Sbjct: 192 EEAANKSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLFTNVYVKNFGEDMTEDKL 251
Query: 226 KKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKF-DDREWYVGKA 284
K +F +YGTITS VM DGKS+ FGFV FE+ D A +AV LNGK+ + + YVG+A
Sbjct: 252 KDMFEKYGTITSHKVMSKDDGKSRGFGFVAFEDPDAAEQAVLELNGKEIAEGKCMYVGRA 311
Query: 285 QKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVM 344
QKK+ER+QELK +FEQ E ++++QG+NLY+KNL D+IDDE+L++ F+ FGTITS KVM
Sbjct: 312 QKKAERQQELKRKFEQLKIERLNRYQGVNLYVKNLDDTIDDERLRKEFTPFGTITSAKVM 371
Query: 345 RDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ----RKEERRARLQAQ 400
+ G SKG GFV FS PEEA++A+ EMNG+++ SKPLYVA+AQ RK ++ +
Sbjct: 372 ME-EGRSKGFGFVCFSQPEEATKAVTEMNGRIVGSKPLYVALAQRKEDRKAHLASQYMQR 430
Query: 401 FSQMRPVAMG-------------PSVP-----------------PRMPMYP--------P 422
+ +R MG P++P PR P P
Sbjct: 431 MANVRMQQMGQIFQPSNAGSYFVPTLPQPQRFYGPAQMAQIRATPRWPAQPNQVRPNTQT 490
Query: 423 GPSGL--------------------------------GQQFLYG-------QAPPAI--I 441
G SG GQQ + G A PA+
Sbjct: 491 GTSGFASMQAAPFRAAPRAPAAQAGALRNSMSARPITGQQAVGGANMQSRTMAGPAVGVS 550
Query: 442 PPQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALST 501
P Q P + Y NM++ P + + +P G + + GQ P+TA +
Sbjct: 551 PGQSRPSNYKYTA----NMRNPP-----QTAMAIPAPSGPSVQQAVHIQGQE-PLTA--S 598
Query: 502 ALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVA 561
LA A P++Q+ +LGE L+PL++ + K+TGMLLE+D +E+LH+LE E+LKAKV
Sbjct: 599 MLAAAPPQEQKQMLGERLFPLIQCMYPQLTGKITGMLLEIDNSELLHMLEHSESLKAKVE 658
Query: 562 EAMEVLRSVAQQQANNP 578
EA+ VL++ +QA P
Sbjct: 659 EAVAVLQAHQAKQAVAP 675
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/333 (30%), Positives = 169/333 (50%), Gaps = 59/333 (17%)
Query: 118 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFE---------- 166
++++ +L I L + FSS G +LS ++ D + +S G+ +V F+
Sbjct: 11 ASLYVGDLHTDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADVVVNVV 70
Query: 167 ---------------------------------NKESAQNAIDKLNGMLINDKQVFVGHF 193
+ +A+ A+D +N +I + + +
Sbjct: 71 TQRGFTRMAACVPHTCLANVPTIVPTMLDPRPHSTVNAERALDTMNFDMIKGRPIRIMW- 129
Query: 194 LRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGF 253
+R+ K+ NVF+KNLD++ ++ + F +G I S V +D G SK +GF
Sbjct: 130 ---SQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDESGASKGYGF 186
Query: 254 VNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLN 313
V+FE + A K+++ +NG + ++ YVGK + ERE+EL E F N
Sbjct: 187 VHFETEEAANKSIDKVNGMLLNGKKVYVGKFIPRKEREKELG--------EKAKLF--TN 236
Query: 314 LYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMN 373
+Y+KN G+ + ++KLK++F ++GTITS KVM G S+G GFVAF P+ A +A+ E+N
Sbjct: 237 VYVKNFGEDMTEDKLKDMFEKYGTITSHKVMSKDDGKSRGFGFVAFEDPDAAEQAVLELN 296
Query: 374 GKMIVS-KPLYVAVAQRKEERRARLQAQFSQMR 405
GK I K +YV AQ+K ER+ L+ +F Q++
Sbjct: 297 GKEIAEGKCMYVGRAQKKAERQQELKRKFEQLK 329
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 98/195 (50%), Gaps = 29/195 (14%)
Query: 28 LTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARA 87
L T++YV + ++T+ +L D+F + G + S +V +S G+G+V + +P A +A
Sbjct: 233 LFTNVYVKNFGEDMTEDKLKDMFEKYGTITSHKVMSK-DDGKSRGFGFVAFEDPDAAEQA 291
Query: 88 LDVLNFTPLNNKSI---RIMYSHRDPS-------------------IRKSGTGNIFIKNL 125
+ LN K I + MY R + + N+++KNL
Sbjct: 292 V-----LELNGKEIAEGKCMYVGRAQKKAERQQELKRKFEQLKIERLNRYQGVNLYVKNL 346
Query: 126 DKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLIND 185
D +ID + L F+ FG I S K+ + G+SKGFGFV F E A A+ ++NG ++
Sbjct: 347 DDTIDDERLRKEFTPFGTITSAKVMME-EGRSKGFGFVCFSQPEEATKAVTEMNGRIVGS 405
Query: 186 KQVFVGHFLRKQERE 200
K ++V RK++R+
Sbjct: 406 KPLYVALAQRKEDRK 420
Score = 45.8 bits (107), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
N++ +LYV +LD + D +L F+ G + S +V + RS G+G+V ++ P +A
Sbjct: 334 NRYQGVNLYVKNLDDTIDDERLRKEFTPFGTITSAKVM--MEEGRSKGFGFVCFSQPEEA 391
Query: 85 ARALDVLNFTPLNNKSIRIMYSHR 108
+A+ +N + +K + + + R
Sbjct: 392 TKAVTEMNGRIVGSKPLYVALAQR 415
>gi|430814566|emb|CCJ28224.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 685
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 270/628 (42%), Positives = 382/628 (60%), Gaps = 93/628 (14%)
Query: 15 PNGVAAGA------SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTR 68
P+ ++AGA S N + SLYVG+LD +VT++ L++LF+ +G V S+RVCRD TR
Sbjct: 50 PSRLSAGANSGVPVSQNNSNSASLYVGELDPSVTEAMLFELFNNIGAVASIRVCRDAVTR 109
Query: 69 RSLGYGYVNYANPAD-----AARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIK 123
RSLGY YVN+ N +D RALD LN+T + K RIM+S RDPS+RK+GTGN+FIK
Sbjct: 110 RSLGYAYVNFHNSSDVNLLTGERALDELNYTLIKGKPCRIMWSQRDPSLRKTGTGNVFIK 169
Query: 124 NLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLI 183
NLD SID+KALHDTF++FG+ILSCK+A D G SKG+GFV ++ ESA+ AI
Sbjct: 170 NLDASIDNKALHDTFTAFGSILSCKVAVDELGNSKGYGFVHYKTSESAEAAI-------- 221
Query: 184 NDKQVFVGHFLRKQERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVM 241
K V+VGH + K++R++ +K KF NV+VKN+D ++ + +++F ++G +TS +
Sbjct: 222 --KHVYVGHHVSKKDRQSKFDDMKLKFTNVYVKNIDPEISEAEFEELFKKFGNVTSLSLS 279
Query: 242 RDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQA 301
D +GKS+ FGFVN+EN +DAA+AVE L+ ++ DR+ YV +AQKK ERE+EL+ Q+EQA
Sbjct: 280 VDENGKSRGFGFVNYENHEDAARAVEELHDTEYKDRKLYVCRAQKKHEREEELRKQYEQA 339
Query: 302 MKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFST 361
+ ++K+ G+NL++KNL D IDDE+L++ FS +GTITS K+M D +G SKG GFV FS+
Sbjct: 340 KLDKLNKYNGINLFVKNLDDDIDDERLRQEFSIYGTITSAKIMVDDNGKSKGFGFVCFSS 399
Query: 362 PEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFS-------QMRPVAMGPSVP 414
P+EA++A+ EMN +M+ KPLYVA+AQRK+ RR++L++Q + Q + A G S
Sbjct: 400 PDEATKAITEMNQRMVSGKPLYVALAQRKDVRRSQLESQINARNQLRIQQQAAAAGMSPQ 459
Query: 415 PRMPMYPPGPSGLGQQFLYGQAPPAIIPP-QMPPRGHAY----------RY-------PL 456
MP G YGQ P +P M RG + R+ P
Sbjct: 460 YGMP---------GAPMFYGQGPTGFMPAGPMTDRGMPFPQPAMVPSRPRWVPQQSGQPN 510
Query: 457 GRNM-QDFPFDMGAGSMLPVP--VDMGAGIPRRDASVGQPMPITALSTALANA------- 506
G+ + Q +P G + L + +PR +PM A+ L +
Sbjct: 511 GQAISQIYPGMSGYNAYLAIQGRSQRSGQVPRPQGIPSRPMMPMAMRPLLGSTRMYRVGS 570
Query: 507 --------------------------SPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLE 540
SPE Q+ +LGE LYP V+ E A K+TGMLLE
Sbjct: 571 NTRNGTKDGIDVGSDDLLTAASLAAASPENQKQMLGEVLYPKVQAQEPGFAGKITGMLLE 630
Query: 541 MDQTEVLHLLESPEALKAKVAEAMEVLR 568
MD +E+LHL+E AL+AKV EA+ VL+
Sbjct: 631 MDNSELLHLIEDDVALRAKVEEALIVLK 658
>gi|354476610|ref|XP_003500517.1| PREDICTED: polyadenylate-binding protein 1-like [Cricetulus
griseus]
Length = 637
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 270/626 (43%), Positives = 369/626 (58%), Gaps = 75/626 (11%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL +VT++ LY+ FS G +LS+RV RD +TRRSLGY VN+ DA RALD
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSSAGPILSIRVYRDRTTRRSLGYASVNFQQLEDAERALDT 71
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF + K +RIM+S RDPS+RKSG GNIF+KNLD+SID KAL+DTFS+FGNILSCK+
Sbjct: 72 MNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFVKNLDRSIDSKALYDTFSAFGNILSCKVV 131
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER--ETVAIKTKF 208
D +G SKG+GFV FE +E A+ AI+K+NGM +ND++VFVG F +++R E A +F
Sbjct: 132 CDENG-SKGYGFVHFETQEEAERAIEKMNGMFLNDRKVFVGRFKSRRDRQAELGARAKEF 190
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NV++KNL E DE L+ +F ++G S VM D GKSK FGFV+FE +DA KAV+
Sbjct: 191 TNVYIKNLGEDMDDERLQGLFSKFGPALSVKVMTDESGKSKGFGFVSFERHEDARKAVDE 250
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQF----------EQAMKETVDKFQGLNLYIKN 318
+NGK + ++ YVG+AQKK ER+ ELK +F EQ ++ + QG+NLY+KN
Sbjct: 251 MNGKDLNGKQIYVGRAQKKVERQTELKHKFGQMKQDKHKVEQVPQDISVRCQGVNLYVKN 310
Query: 319 LGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIV 378
L D IDDE+L++ FS FGTITS KV + G SKG GFV FS+PEEA++A+ EMNG+++
Sbjct: 311 LDDGIDDERLRKEFSPFGTITSAKVTME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVA 369
Query: 379 SKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYP----------------- 421
+KPLYVA+AQRKEER+A L Q+ Q S P P P
Sbjct: 370 TKPLYVALAQRKEERQAHLSNQYMQRMASTSAVSSPVINPFQPAQAPSGYFMTTTSQTQN 429
Query: 422 --------------PGPSGLGQ-------QFLYGQAPPAIIPP---QMPPRGHAYR---- 453
PG G Q Q + PA IP P A R
Sbjct: 430 CGAYYAPNQTTQQGPGHRGSAQGARAHPFQNMSSAIQPATIPSFSTSGPASSQALRSMST 489
Query: 454 -------------YPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALS 500
+P R + + + G + P + + + ++V + +
Sbjct: 490 HRAGSASTQMMGSHPTARPVPQYKYTAGVRN-PPQHLSAQPQVTMQRSAVPVQGKASLTA 548
Query: 501 TALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKV 560
+ LA+ASP+ Q+ +LGE L+ L++ + A K+TGMLLE+D E+ H+LESPE L K+
Sbjct: 549 SMLASASPQAQKQMLGEWLFSLIQAMHPALAGKITGMLLEIDNLELRHMLESPECLHTKI 608
Query: 561 AEAMEVLRSVAQQQANNPADQLASLS 586
EA+ VL+ A Q P + S++
Sbjct: 609 DEAIAVLQ--AHQAKETPQQAVGSVA 632
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 111/298 (37%), Positives = 174/298 (58%), Gaps = 16/298 (5%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATD-GSGQSKGFGFVQFEN 167
+PS ++++ +L + L++ FSS G ILS ++ D + +S G+ V F+
Sbjct: 2 NPSDPSYSLASLYVGDLHPDVTEAMLYEKFSSAGPILSIRVYRDRTTRRSLGYASVNFQQ 61
Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
E A+ A+D +N +I K V + +R+ K+ N+FVKNLD S + L
Sbjct: 62 LEDAERALDTMNFDVIKGKPVRI----MWSQRDPSLRKSGVGNIFVKNLDRSIDSKALYD 117
Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
F +G I S V+ D +G SK +GFV+FE ++A +A+E +NG +DR+ +VG+ + +
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEEAERAIEKMNGMFLNDRKVFVGRFKSR 176
Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
+R+ EL + ++ N+YIKNLG+ +DDE+L+ LFS+FG S KVM D
Sbjct: 177 RDRQAELGARAKEFT----------NVYIKNLGEDMDDERLQGLFSKFGPALSVKVMTDE 226
Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
SG SKG GFV+F E+A +A+ EMNGK + K +YV AQ+K ER+ L+ +F QM+
Sbjct: 227 SGKSKGFGFVSFERHEDARKAVDEMNGKDLNGKQIYVGRAQKKVERQTELKHKFGQMK 284
>gi|85097328|ref|XP_960425.1| polyadenylate-binding protein [Neurospora crassa OR74A]
gi|74696454|sp|Q7S6N6.1|PABP_NEUCR RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|28921916|gb|EAA31189.1| polyadenylate-binding protein [Neurospora crassa OR74A]
Length = 764
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 269/670 (40%), Positives = 382/670 (57%), Gaps = 132/670 (19%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVG+LD +VT++ L++LFSQ+G V S+RVCRD TRRSLGY YVNY AD +AL
Sbjct: 59 SASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTADGEKAL 118
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LN+T + + RIM+S RDP++RK+G GNIFIKNLD +ID+KALHDTF++FGNILSCK
Sbjct: 119 EELNYTLIKGRPCRIMWSQRDPALRKTGAGNIFIKNLDAAIDNKALHDTFAAFGNILSCK 178
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKT 206
+A D G SKG+GFV +E E+A AI +NGML+N+K+V+VGH + K++R++ +K
Sbjct: 179 VAQDEHGNSKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKDRQSKFEEMKA 238
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
F NV+VKN++ TDE+ +++F ++G +TS+ + RD +GKS+ FGFVNF + AA+AV
Sbjct: 239 NFTNVYVKNINNEVTDEEFRELFAKFGEVTSSSLARDQEGKSRGFGFVNFTTHEAAAQAV 298
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
+ LNGK F ++ YVG+AQKK ERE+EL+ +E A E +K+QG+NLYIKNLGD +DD+
Sbjct: 299 DELNGKDFRGQDLYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLGDDVDDD 358
Query: 327 KLKELFSEFGTITSCKVMRDP--------------------------------------- 347
KL+ +FSE+G ITS KVMRD
Sbjct: 359 KLRAMFSEYGPITSAKVMRDSLIEGSEEKDEKDKENKKEGETKEEEQNEGSEKKTEKKGD 418
Query: 348 --SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFS--- 402
G SKG GFV FS P++A++A+ EMN +M+ KPLYVA+AQRK+ R+++L+A
Sbjct: 419 RKLGKSKGFGFVCFSNPDDATKAVTEMNQRMVDGKPLYVALAQRKDVRKSQLEASIQARN 478
Query: 403 --QMRPVAMGPSVPP-----------RMPMYPPGPSGLGQQFLYGQAPPAI--------- 440
+M+ A +P + P + P P G G F G P +
Sbjct: 479 QLRMQQAAAQAGMPQQYMQAPVYYAGQQPGFMPAPGGRGVPFPQGGIVPGVQGGRPGQYP 538
Query: 441 --------IPP-QMPPRGHA---------------YRYPLGRNMQ--------------- 461
+PP QMPP G+ Y +G+
Sbjct: 539 YQQGGRGGVPPQQMPPMGYPINQFGPGAFPPNTPQYMAAMGQVGALGGGRGGPAGRGPQG 598
Query: 462 ---DFPFDMGAGSMLP------VPVDMGA-GIPRRDASV-----------GQPMPITA-- 498
P + G +P P + G G PR +A+ G P ++A
Sbjct: 599 IPAGIPQGLQGGPAVPGYPPAGRPQNGGGRGTPRGNANFMAAGRGASPIPGAPADLSAGS 658
Query: 499 -LSTALANA-SPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEAL 556
L LA P+ Q+ ++GE+L+P ++ ++ A K+TGMLLEMD E+++L E AL
Sbjct: 659 FLQAQLATTQDPQAQKQIIGENLFPKIQAIQPALAGKITGMLLEMDNAELINLFEDDNAL 718
Query: 557 KAKVAEAMEV 566
KV EA+ V
Sbjct: 719 NVKVQEALAV 728
>gi|52346016|ref|NP_001005051.1| poly(A) binding protein, cytoplasmic 1 [Xenopus (Silurana)
tropicalis]
gi|49903495|gb|AAH76931.1| polyadenylate-binding protein 1 [Xenopus (Silurana) tropicalis]
Length = 634
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 252/513 (49%), Positives = 333/513 (64%), Gaps = 39/513 (7%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
S + SLYVGDL +VT++ LY+ FS G +LS+RVCRD+ TRRSLGY YVN+ PA
Sbjct: 4 SAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPA 63
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
DA RALD +NF + K +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FG
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFG 123
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 202
NILSCK+ D +G SKG+GFV FE +E+A+ AIDK+NGML+ND++VFVG F ++ERE
Sbjct: 124 NILSCKVVCDENG-SKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSRKEREAE 182
Query: 203 --AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
A +F NV++KN E DE LK++FG+YG S VM D +GKSK FGFV+FE +
Sbjct: 183 LGARAKEFTNVYIKNFGEDMDDERLKEMFGKYGPALSVKVMTDDNGKSKGFGFVSFERHE 242
Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
DA KAV+ +NGK + + YVG+AQKK ER+ ELK +FEQ ++ + ++QG+NLY+KNL
Sbjct: 243 DAQKAVDDMNGKDMNGKAIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLD 302
Query: 321 DSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSK 380
D IDDE+L++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +K
Sbjct: 303 DGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATK 361
Query: 381 PLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAI 440
PLYVA+AQRKEER+A L Q+ Q P+ P + Y P PS + PPA
Sbjct: 362 PLYVALAQRKEERQAHLTNQYMQRMASVRVPN--PVINPYQPPPSS----YFMAAIPPA- 414
Query: 441 IPPQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALS 500
+ A YP G+ Q P PR A +P P +
Sbjct: 415 -------QNRAAYYPPGQIAQLRP------------------SPRWTAQGARPHPFQNMP 449
Query: 501 TALANASPEQQRTLLGESLYPLVEQLERDAAAK 533
A+ +P R ++ P Q+ R +A+
Sbjct: 450 GAIRPTAP---RPPTFSTMRPASNQVPRVVSAQ 479
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 105/298 (35%), Positives = 173/298 (58%), Gaps = 16/298 (5%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFEN 167
+PS ++++ +L + L++ FS G ILS ++ D + +S G+ +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
A+ A+D +N +I K V + +R+ K+ N+F+KNLD+S ++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYD 117
Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
F +G I S V+ D +G SK +GFV+FE + A +A++ +NG +DR+ +VG+ + +
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSR 176
Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
ERE EL + ++ N+YIKN G+ +DDE+LKE+F ++G S KVM D
Sbjct: 177 KEREAELGARAKEFT----------NVYIKNFGEDMDDERLKEMFGKYGPALSVKVMTDD 226
Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
+G SKG GFV+F E+A +A+ +MNGK + K +YV AQ+K ER+ L+ +F QM+
Sbjct: 227 NGKSKGFGFVSFERHEDAQKAVDDMNGKDMNGKAIYVGRAQKKVERQTELKRKFEQMK 284
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 543 PLTA--SMLAAAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPE 600
Query: 555 ALKAKVAEAMEVLRSVAQQQA 575
+L++KV EA+ VL++ ++A
Sbjct: 601 SLRSKVDEAVAVLQAHQAKEA 621
>gi|302693014|ref|XP_003036186.1| hypothetical protein SCHCODRAFT_66185 [Schizophyllum commune H4-8]
gi|300109882|gb|EFJ01284.1| hypothetical protein SCHCODRAFT_66185 [Schizophyllum commune H4-8]
Length = 632
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 220/394 (55%), Positives = 300/394 (76%), Gaps = 3/394 (0%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVG+LD VT++ L+++F+ +G V S+RVCRD TRRSLGY YVNY N AD RAL
Sbjct: 45 SASLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERAL 104
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LN++ + N+ RIM+S RDP++RK+G GNIFIKNLD+ ID+KALHDTF++FGN+LSCK
Sbjct: 105 EQLNYSLIKNRPCRIMWSQRDPALRKTGQGNIFIKNLDEQIDNKALHDTFAAFGNVLSCK 164
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKT 206
+ATD G SKG+GFV +E E+A+NAI +NGML+NDK+V+VGH + ++ER++ +K
Sbjct: 165 VATDEHGNSKGYGFVHYETAEAAENAIKNVNGMLLNDKKVYVGHHISRKERQSKIDEMKA 224
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
+F N+++KN+D TDE+ + +F E G +TS+V+ RD +G+S+ FGFVN+E ++A KAV
Sbjct: 225 QFTNLYIKNIDPEVTDEEFEALFREQGNVTSSVIQRDEEGRSRGFGFVNYETHEEAQKAV 284
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
+ LN K F R+ +V +AQKK+ERE+EL+ EQA E + K+QGLNLY+KNL D +DDE
Sbjct: 285 DNLNDKDFHGRKLFVSRAQKKAEREEELRKAHEQARLEKLSKYQGLNLYVKNLDDDVDDE 344
Query: 327 KLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 386
KL+ F FGTITS KVMRD G+SKG GFV +S+PEEAS+A+AEMN KMI SKPLYV+
Sbjct: 345 KLRAEFEPFGTITSAKVMRDDKGVSKGFGFVCYSSPEEASKAVAEMNNKMIGSKPLYVSH 404
Query: 387 AQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMY 420
AQR+E RR +L++Q +Q R M + MP Y
Sbjct: 405 AQRREVRRQQLESQIAQ-RNQIMHQAAAGGMPGY 437
>gi|336465951|gb|EGO54116.1| hypothetical protein NEUTE1DRAFT_87204 [Neurospora tetrasperma FGSC
2508]
gi|350287213|gb|EGZ68460.1| polyadenylate binding protein [Neurospora tetrasperma FGSC 2509]
Length = 764
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 268/669 (40%), Positives = 382/669 (57%), Gaps = 131/669 (19%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVG+LD +VT++ L++LFSQ+G V S+RVCRD TRRSLGY YVNY AD +AL
Sbjct: 59 SASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTADGEKAL 118
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LN+T + + RIM+S RDP++RK+G GNIFIKNLD +ID+KALHDTF++FGNILSCK
Sbjct: 119 EELNYTLIKGRPCRIMWSQRDPALRKTGAGNIFIKNLDAAIDNKALHDTFAAFGNILSCK 178
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKT 206
+A D G SKG+GFV +E E+A AI +NGML+N+K+V+VGH + K++R++ +K
Sbjct: 179 VAQDEHGNSKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKDRQSKFEEMKA 238
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
F NV+VKN++ TDE+ +++F ++G +TS+ + RD +GK++ FGFVNF + AA+AV
Sbjct: 239 NFTNVYVKNINNEVTDEEFRELFAKFGEVTSSSLARDQEGKTRGFGFVNFTTHEAAAQAV 298
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
+ LNGK F ++ YVG+AQKK ERE+EL+ +E A E +K+QG+NLYIKNLGD +DD+
Sbjct: 299 DELNGKDFRGQDLYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLGDDVDDD 358
Query: 327 KLKELFSEFGTITSCKVMRDP--------------------------------------- 347
KL+ +FSE+G ITS KVMRD
Sbjct: 359 KLRAMFSEYGPITSAKVMRDSLIEGSEEKDEKDKENKKEGEAEEEQKEGSEKKTEKKGDR 418
Query: 348 -SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFS---- 402
G SKG GFV FS P++A++A+ EMN +M+ KPLYVA+AQRK+ R+++L+A
Sbjct: 419 KLGKSKGFGFVCFSNPDDATKAVTEMNQRMVDGKPLYVALAQRKDVRKSQLEASIQARNQ 478
Query: 403 -QMRPVAMGPSVPP-----------RMPMYPPGPSGLGQQFLYGQAPPAI---------- 440
+M+ A +P + P + P P G G F G P +
Sbjct: 479 LRMQQAAAQAGMPQQYMQAPVYYAGQQPGFMPAPGGRGVPFPQGGIVPGVQGGRPGQYPY 538
Query: 441 -------IPP-QMPPRGHA---------------YRYPLGRNMQ---------------- 461
+PP QMPP G+ Y +G+
Sbjct: 539 QQGGRGGVPPQQMPPMGYPINQFGPGAFPPNTPQYMAAMGQVGALGGGRGGPAGRGPQGI 598
Query: 462 --DFPFDMGAGSMLP------VPVDMGA-GIPRRDASV-----------GQPMPITA--- 498
P + G +P P + G G PR +A+ G P ++A
Sbjct: 599 PAGIPQGLQGGPAVPGYPPAGRPQNGGGRGTPRGNANFMAAGRGASPIPGAPADLSAGSF 658
Query: 499 LSTALANA-SPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALK 557
L LA P+ Q+ ++GE+L+P ++ ++ A K+TGMLLEMD E+++L E AL
Sbjct: 659 LQAQLATTQDPQAQKQIIGENLFPKIQAIQPALAGKITGMLLEMDNAELINLFEDDNALN 718
Query: 558 AKVAEAMEV 566
KV EA+ V
Sbjct: 719 VKVQEALAV 727
>gi|224046575|ref|XP_002200268.1| PREDICTED: polyadenylate-binding protein 1 [Taeniopygia guttata]
Length = 637
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 230/407 (56%), Positives = 300/407 (73%), Gaps = 4/407 (0%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
AS + SLYVGDL +VT++ LY+ FS G +LS+RVCRD+ TRRSLGY YVN+ P
Sbjct: 3 ASAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + K +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G SKG+GFV FE +E+A+ AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 123 GNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 202 V--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
A +F NV++KN E DE LK++FG++G S VM D GKSK FGFV+FE
Sbjct: 182 ELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAV+ +NGK+ + ++ YVG+AQKK ER+ ELK +FEQ ++ + ++QG+NLY+KNL
Sbjct: 242 EDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D IDDE+L++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +
Sbjct: 302 DDGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT 360
Query: 380 KPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSG 426
KPLYVA+AQRKEER+A L Q+ Q P P P PSG
Sbjct: 361 KPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSG 407
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 65/89 (73%), Gaps = 7/89 (7%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA+A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 545 PLTA--SMLASAPPQEQKQMLGERLFPLIQSMHPTLAGKITGMLLEIDNSELLHMLESPE 602
Query: 555 ALKAKVAEAMEVL-----RSVAQQQANNP 578
+L++KV EA+ VL + AQ+ NNP
Sbjct: 603 SLRSKVDEAVAVLQAHQAKEAAQKAVNNP 631
>gi|31560656|ref|NP_032800.2| polyadenylate-binding protein 1 [Mus musculus]
gi|341941223|sp|P29341.2|PABP1_MOUSE RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|13278026|gb|AAH03870.1| Poly(A) binding protein, cytoplasmic 1 [Mus musculus]
gi|15029950|gb|AAH11207.1| Poly(A) binding protein, cytoplasmic 1 [Mus musculus]
gi|18606321|gb|AAH23145.1| Poly(A) binding protein, cytoplasmic 1 [Mus musculus]
gi|26336853|dbj|BAC32110.1| unnamed protein product [Mus musculus]
gi|29145018|gb|AAH46233.1| Poly(A) binding protein, cytoplasmic 1 [Mus musculus]
gi|74144576|dbj|BAE36120.1| unnamed protein product [Mus musculus]
gi|74145579|dbj|BAE36203.1| unnamed protein product [Mus musculus]
gi|74179929|dbj|BAE36522.1| unnamed protein product [Mus musculus]
gi|74198265|dbj|BAE35302.1| unnamed protein product [Mus musculus]
gi|74198320|dbj|BAE35327.1| unnamed protein product [Mus musculus]
gi|74214225|dbj|BAE40360.1| unnamed protein product [Mus musculus]
gi|74223327|dbj|BAE21553.1| unnamed protein product [Mus musculus]
gi|148676871|gb|EDL08818.1| poly A binding protein, cytoplasmic 1 [Mus musculus]
Length = 636
Score = 470 bits (1209), Expect = e-129, Method: Compositional matrix adjust.
Identities = 229/406 (56%), Positives = 299/406 (73%), Gaps = 4/406 (0%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
S + SLYVGDL +VT++ LY+ FS G +LS+RVCRD+ TRRSLGY YVN+ PA
Sbjct: 4 SAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPA 63
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
DA RALD +NF + K +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FG
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFG 123
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 202
NILSCK+ D +G SKG+GFV FE +E+A+ AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 124 NILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Query: 203 --AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
A +F NV++KN E DE LK++FG++G S VM D GKSK FGFV+FE +
Sbjct: 183 LGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHE 242
Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
DA KAV+ +NGK+ + ++ YVG+AQKK ER+ ELK +FEQ ++ + ++QG+NLY+KNL
Sbjct: 243 DAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLD 302
Query: 321 DSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSK 380
D IDDE+L++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +K
Sbjct: 303 DGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATK 361
Query: 381 PLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSG 426
PLYVA+AQRKEER+A L Q+ Q P P P PSG
Sbjct: 362 PLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSG 407
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 110/298 (36%), Positives = 173/298 (58%), Gaps = 16/298 (5%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFEN 167
+PS ++++ +L + L++ FS G ILS ++ D + +S G+ +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
A+ A+D +N +I K V + +R+ K+ N+F+KNLD+S ++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYD 117
Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
F +G I S V+ D +G SK +GFV+FE + A +A+E +NG +DR+ +VG+ + +
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
ERE EL + ++ N+YIKN G+ +DDE+LKELF +FG S KVM D
Sbjct: 177 KEREAELGARAKEFT----------NVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDE 226
Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
SG SKG GFV+F E+A +A+ EMNGK + K +YV AQ+K ER+ L+ +F QM+
Sbjct: 227 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 284
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA+A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 544 PLTA--SMLASAPPQEQKQMLGERLFPLIQAMHPSLAGKITGMLLEIDNSELLHMLESPE 601
Query: 555 ALKAKVAEAMEVLRSVAQQQA 575
+L++KV EA+ VL++ ++A
Sbjct: 602 SLRSKVDEAVAVLQAHQAKEA 622
>gi|149637721|ref|XP_001509272.1| PREDICTED: polyadenylate-binding protein 1-like [Ornithorhynchus
anatinus]
Length = 636
Score = 470 bits (1209), Expect = e-129, Method: Compositional matrix adjust.
Identities = 229/406 (56%), Positives = 299/406 (73%), Gaps = 4/406 (0%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
S + SLYVGDL +VT++ LY+ FS G +LS+RVCRD+ TRRSLGY YVN+ PA
Sbjct: 4 SAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPA 63
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
DA RALD +NF + K +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FG
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFG 123
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 202
NILSCK+ D +G SKG+GFV FE +E+A+ AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 124 NILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Query: 203 --AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
A +F NV++KN E DE LK++FG++G S VM D GKSK FGFV+FE +
Sbjct: 183 LGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHE 242
Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
DA KAV+ +NGK+ + ++ YVG+AQKK ER+ ELK +FEQ ++ + ++QG+NLY+KNL
Sbjct: 243 DAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLD 302
Query: 321 DSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSK 380
D IDDE+L++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +K
Sbjct: 303 DGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATK 361
Query: 381 PLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSG 426
PLYVA+AQRKEER+A L Q+ Q P P P PSG
Sbjct: 362 PLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSG 407
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 110/298 (36%), Positives = 173/298 (58%), Gaps = 16/298 (5%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFEN 167
+PS ++++ +L + L++ FS G ILS ++ D + +S G+ +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
A+ A+D +N +I K V + +R+ K+ N+F+KNLD+S ++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYD 117
Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
F +G I S V+ D +G SK +GFV+FE + A +A+E +NG +DR+ +VG+ + +
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
ERE EL + ++ N+YIKN G+ +DDE+LKELF +FG S KVM D
Sbjct: 177 KEREAELGARAKEFT----------NVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDE 226
Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
SG SKG GFV+F E+A +A+ EMNGK + K +YV AQ+K ER+ L+ +F QM+
Sbjct: 227 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 284
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 64/88 (72%), Gaps = 7/88 (7%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA+A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 544 PLTA--SMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPE 601
Query: 555 ALKAKVAEAMEVL-----RSVAQQQANN 577
+L++KV EA+ VL + AQ+ NN
Sbjct: 602 SLRSKVDEAVAVLQAHQAKEAAQKAVNN 629
>gi|432907583|ref|XP_004077665.1| PREDICTED: polyadenylate-binding protein 1-like [Oryzias latipes]
Length = 635
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 229/406 (56%), Positives = 297/406 (73%), Gaps = 4/406 (0%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
S + SLYVGDL +VT++ LY+ FS G +LS+RVCRD+ TRRSLGY YVN+ PA
Sbjct: 4 SAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPA 63
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
DA RALD +NF + + +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FG
Sbjct: 64 DAERALDTMNFDVIKGRPLRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFG 123
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 202
NILSCK+ D +G SKG+GFV FE E+A+ AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 124 NILSCKVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Query: 203 --AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
A +F NV++KN E DE LK++FG YG S VM D GKSK FGFV+FE +
Sbjct: 183 LGARAREFTNVYIKNFGEDMDDEKLKELFGNYGPALSVRVMTDDTGKSKGFGFVSFERHE 242
Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
DA KAV+ +NGK+ + R+ YVG+AQKK ER+ ELK +FEQ ++ + ++QG+NLY+KNL
Sbjct: 243 DAQKAVDDMNGKELNGRQVYVGRAQKKGERQNELKRKFEQMKQDRMTRYQGVNLYVKNLD 302
Query: 321 DSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSK 380
D +DDE+L++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +K
Sbjct: 303 DGLDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATK 361
Query: 381 PLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSG 426
PLYVA+AQRKEER+A L Q+ Q P P P PSG
Sbjct: 362 PLYVALAQRKEERQAHLTNQYMQRMATVRAVPNPVLNPYQPAPPSG 407
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 104/298 (34%), Positives = 171/298 (57%), Gaps = 16/298 (5%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFEN 167
+PS ++++ +L + L++ FS G ILS ++ D + +S G+ +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
A+ A+D +N +I + + + +R+ K+ N+F+KNLD+S ++ L
Sbjct: 62 PADAERALDTMNFDVIKGRPLRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYD 117
Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
F +G I S V+ D +G SK +GFV+FE + A +A+E +NG +DR+ +VG+ + +
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
ERE EL + + N+YIKN G+ +DDEKLKELF +G S +VM D
Sbjct: 177 KEREAELGARAREF----------TNVYIKNFGEDMDDEKLKELFGNYGPALSVRVMTDD 226
Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
+G SKG GFV+F E+A +A+ +MNGK + + +YV AQ+K ER+ L+ +F QM+
Sbjct: 227 TGKSKGFGFVSFERHEDAQKAVDDMNGKELNGRQVYVGRAQKKGERQNELKRKFEQMK 284
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 65/89 (73%), Gaps = 6/89 (6%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 544 PLTA--SMLAAAPPQEQKQMLGERLFPLIQNMHPSLAGKITGMLLEIDNSELLHMLESPE 601
Query: 555 ALKAKVAEAMEVLRS----VAQQQANNPA 579
+L++KV EA+ VL++ A Q++ PA
Sbjct: 602 SLRSKVDEAVAVLQAHQAKEAAQKSTTPA 630
>gi|353227476|emb|CCA77984.1| related to mRNA polyadenylate-binding protein PAB1 [Piriformospora
indica DSM 11827]
Length = 693
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 262/582 (45%), Positives = 367/582 (63%), Gaps = 38/582 (6%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVG+LD +VT++ L+++F+ +G V S+RVCRD TRRSLGY YVNY N +D RAL
Sbjct: 109 SASLYVGELDPSVTEAILFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNSSDGERAL 168
Query: 89 DVLNFTPLNNKSI---RIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNIL 145
+ LN++ + K RIM+S RDP++RK+G GNIFIKNLD+ ID+KALHDTF +FGN+L
Sbjct: 169 EQLNYSLIKGKPWHVSRIMWSQRDPALRKTGQGNIFIKNLDEGIDNKALHDTFVAFGNVL 228
Query: 146 SCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--A 203
SCK+A D G SKG+GFV +E E+A AI ++GML+NDK+V+VG + ++ER++
Sbjct: 229 SCKVAVDEQGNSKGYGFVHYETAEAADAAIKAVDGMLLNDKKVYVGRHIPRKERQSKLDE 288
Query: 204 IKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAA 263
I+ +F N++VKNLD +++ +K+F YGTITSAV+ D DGKSK FGFVN+E + A
Sbjct: 289 IRAQFTNIYVKNLDTEIDEDEFRKLFEPYGTITSAVLNLDADGKSKGFGFVNYETHEMAQ 348
Query: 264 KAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSI 323
KAV+ALN K + ++ +VG+AQK++ER++EL+ F+ A E + K QG+NLYIKN+ D +
Sbjct: 349 KAVDALNEKDINGKKLFVGRAQKRNERDEELRRTFDAAKMERLAKLQGVNLYIKNIDDDM 408
Query: 324 DDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLY 383
DDEKL+ F +GTITS K+MRD G+SKG GFV FSTP+EA+RA+AEMN KMI SKPLY
Sbjct: 409 DDEKLRAEFEPYGTITSSKIMRDDKGVSKGFGFVCFSTPDEATRAIAEMNNKMIGSKPLY 468
Query: 384 VAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFL-------YGQA 436
V++AQR++ RR +L++Q SQ + M + + Y GP G Y
Sbjct: 469 VSLAQRRDVRRQQLESQISQRNQIRMQQAAAAGLTGYINGPMYYGAPGFPAQGGRGYAGY 528
Query: 437 PPAIIP----------PQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRR 486
PP + P P G+A + P M P+ G P G PR
Sbjct: 529 PPGMTGPGRGGYRGPMPVPPIPGYAGQAPQPYGMN--PYAPRPGPGGPRGGAPTNGTPRS 586
Query: 487 DASVGQPMPITALS--------------TALANASPEQQRTLLGESLYPLVEQLERDAAA 532
A G P A + + + +A E Q+ L+GE +Y V D A
Sbjct: 587 GAGRGLPQAAPATTAAPKTATKPTELDISHITSAPAEGQKQLIGEIIYMRVYGPYPDLAG 646
Query: 533 KVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQ 574
K+TGMLLEM+ +E++ LL+ +L K+ EA+ VL A ++
Sbjct: 647 KITGMLLEMENSELIRLLKDTPSLDMKINEALAVLHEYAPKE 688
>gi|19705459|ref|NP_599180.1| polyadenylate-binding protein 1 [Rattus norvegicus]
gi|47605941|sp|Q9EPH8.1|PABP1_RAT RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|12188891|emb|CAC21554.1| poly(A) binding protein [Rattus norvegicus]
gi|52789215|gb|AAH83176.1| Poly(A) binding protein, cytoplasmic 1 [Rattus norvegicus]
gi|149066519|gb|EDM16392.1| rCG60104 [Rattus norvegicus]
Length = 636
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 229/406 (56%), Positives = 299/406 (73%), Gaps = 4/406 (0%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
S + SLYVGDL +VT++ LY+ FS G +LS+RVCRD+ TRRSLGY YVN+ PA
Sbjct: 4 SAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPA 63
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
DA RALD +NF + K +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FG
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFG 123
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 202
NILSCK+ D +G SKG+GFV FE +E+A+ AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 124 NILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Query: 203 --AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
A +F NV++KN E DE LK++FG++G S VM D GKSK FGFV+FE +
Sbjct: 183 LGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHE 242
Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
DA KAV+ +NGK+ + ++ YVG+AQKK ER+ ELK +FEQ ++ + ++QG+NLY+KNL
Sbjct: 243 DAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLD 302
Query: 321 DSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSK 380
D IDDE+L++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +K
Sbjct: 303 DGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATK 361
Query: 381 PLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSG 426
PLYVA+AQRKEER+A L Q+ Q P P P PSG
Sbjct: 362 PLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSG 407
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 110/298 (36%), Positives = 173/298 (58%), Gaps = 16/298 (5%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFEN 167
+PS ++++ +L + L++ FS G ILS ++ D + +S G+ +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
A+ A+D +N +I K V + +R+ K+ N+F+KNLD+S ++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYD 117
Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
F +G I S V+ D +G SK +GFV+FE + A +A+E +NG +DR+ +VG+ + +
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
ERE EL + ++ N+YIKN G+ +DDE+LKELF +FG S KVM D
Sbjct: 177 KEREAELGARAKEFT----------NVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDE 226
Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
SG SKG GFV+F E+A +A+ EMNGK + K +YV AQ+K ER+ L+ +F QM+
Sbjct: 227 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 284
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA+A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 544 PLTA--SMLASAPPQEQKQMLGERLFPLIQAMHPSLAGKITGMLLEIDNSELLHMLESPE 601
Query: 555 ALKAKVAEAMEVLRSVAQQQA 575
+L++KV EA+ VL++ ++A
Sbjct: 602 SLRSKVDEAVAVLQAHQAKEA 622
>gi|53754|emb|CAA46522.1| poly(A) binding protein [Mus musculus]
Length = 636
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 229/406 (56%), Positives = 299/406 (73%), Gaps = 4/406 (0%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
S + SLYVGDL +VT++ LY+ FS G +LS+RVCRD+ TRRSLGY YVN+ PA
Sbjct: 4 SAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPA 63
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
DA RALD +NF + K +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FG
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFG 123
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 202
NILSCK+ D +G SKG+GFV FE +E+A+ AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 124 NILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSQKEREAE 182
Query: 203 --AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
A +F NV++KN E DE LK++FG++G S VM D GKSK FGFV+FE +
Sbjct: 183 LGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHE 242
Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
DA KAV+ +NGK+ + ++ YVG+AQKK ER+ ELK +FEQ ++ + ++QG+NLY+KNL
Sbjct: 243 DAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLD 302
Query: 321 DSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSK 380
D IDDE+L++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +K
Sbjct: 303 DGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATK 361
Query: 381 PLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSG 426
PLYVA+AQRKEER+A L Q+ Q P P P PSG
Sbjct: 362 PLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSG 407
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 110/298 (36%), Positives = 173/298 (58%), Gaps = 16/298 (5%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFEN 167
+PS ++++ +L + L++ FS G ILS ++ D + +S G+ +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
A+ A+D +N +I K V + +R+ K+ N+F+KNLD+S ++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYD 117
Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
F +G I S V+ D +G SK +GFV+FE + A +A+E +NG +DR+ +VG+ + +
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSQ 176
Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
ERE EL + ++ N+YIKN G+ +DDE+LKELF +FG S KVM D
Sbjct: 177 KEREAELGARAKEFT----------NVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDE 226
Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
SG SKG GFV+F E+A +A+ EMNGK + K +YV AQ+K ER+ L+ +F QM+
Sbjct: 227 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 284
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA+A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 544 PLTA--SMLASAPPQEQKQMLGERLFPLIQAMHPSLAGKITGMLLEIDNSELLHMLESPE 601
Query: 555 ALKAKVAEAMEVLRSVAQQQA 575
+L++KV EA+ VL++ ++A
Sbjct: 602 SLRSKVDEAVAVLQAHQAKEA 622
>gi|327283838|ref|XP_003226647.1| PREDICTED: polyadenylate-binding protein 1-like [Anolis
carolinensis]
Length = 636
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 229/406 (56%), Positives = 299/406 (73%), Gaps = 4/406 (0%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
S + SLYVGDL +VT++ LY+ FS G +LS+RVCRD+ TRRSLGY YVN+ PA
Sbjct: 4 SAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPA 63
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
DA RALD +NF + K +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FG
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFG 123
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 202
NILSCK+ D +G SKG+GFV FE +E+A+ AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 124 NILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Query: 203 --AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
A +F NV++KN E DE LK++FG++G S VM D GKSK FGFV+FE +
Sbjct: 183 LGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHE 242
Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
DA KAV+ +NGK+ + ++ YVG+AQKK ER+ ELK +FEQ ++ + ++QG+NLY+KNL
Sbjct: 243 DAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLD 302
Query: 321 DSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSK 380
D IDDE+L++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +K
Sbjct: 303 DGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATK 361
Query: 381 PLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSG 426
PLYVA+AQRKEER+A L Q+ Q P P P PSG
Sbjct: 362 PLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSG 407
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 110/298 (36%), Positives = 173/298 (58%), Gaps = 16/298 (5%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFEN 167
+PS ++++ +L + L++ FS G ILS ++ D + +S G+ +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
A+ A+D +N +I K V + +R+ K+ N+F+KNLD+S ++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYD 117
Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
F +G I S V+ D +G SK +GFV+FE + A +A+E +NG +DR+ +VG+ + +
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
ERE EL + ++ N+YIKN G+ +DDE+LKELF +FG S KVM D
Sbjct: 177 KEREAELGARAKEFT----------NVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDE 226
Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
SG SKG GFV+F E+A +A+ EMNGK + K +YV AQ+K ER+ L+ +F QM+
Sbjct: 227 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 284
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 66/90 (73%), Gaps = 7/90 (7%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA+A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 544 PLTA--SMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPE 601
Query: 555 ALKAKVAEAMEVL-----RSVAQQQANNPA 579
+L++KV EA+ VL + AQ+ NNPA
Sbjct: 602 SLRSKVDEAVAVLQAHQAKEAAQKAVNNPA 631
>gi|387017716|gb|AFJ50976.1| Polyadenylate-binding protein 1-like [Crotalus adamanteus]
Length = 636
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 229/406 (56%), Positives = 299/406 (73%), Gaps = 4/406 (0%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
S + SLYVGDL +VT++ LY+ FS G +LS+RVCRD+ TRRSLGY YVN+ PA
Sbjct: 4 SAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPA 63
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
DA RALD +NF + K +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FG
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFG 123
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 202
NILSCK+ D +G SKG+GFV FE +E+A+ AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 124 NILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Query: 203 --AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
A +F NV++KN E DE LK++FG++G S VM D GKSK FGFV+FE +
Sbjct: 183 LGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHE 242
Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
DA KAV+ +NGK+ + ++ YVG+AQKK ER+ ELK +FEQ ++ + ++QG+NLY+KNL
Sbjct: 243 DAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLD 302
Query: 321 DSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSK 380
D IDDE+L++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +K
Sbjct: 303 DGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATK 361
Query: 381 PLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSG 426
PLYVA+AQRKEER+A L Q+ Q P P P PSG
Sbjct: 362 PLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSG 407
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 110/298 (36%), Positives = 173/298 (58%), Gaps = 16/298 (5%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFEN 167
+PS ++++ +L + L++ FS G ILS ++ D + +S G+ +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
A+ A+D +N +I K V + +R+ K+ N+F+KNLD+S ++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYD 117
Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
F +G I S V+ D +G SK +GFV+FE + A +A+E +NG +DR+ +VG+ + +
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
ERE EL + ++ N+YIKN G+ +DDE+LKELF +FG S KVM D
Sbjct: 177 KEREAELGARAKEFT----------NVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDE 226
Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
SG SKG GFV+F E+A +A+ EMNGK + K +YV AQ+K ER+ L+ +F QM+
Sbjct: 227 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 284
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 66/90 (73%), Gaps = 7/90 (7%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA+A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 544 PLTA--SMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPE 601
Query: 555 ALKAKVAEAMEVL-----RSVAQQQANNPA 579
+L++KV EA+ VL + AQ+ NNPA
Sbjct: 602 SLRSKVDEAVAVLQAHQAKEAAQKAVNNPA 631
>gi|302683360|ref|XP_003031361.1| hypothetical protein SCHCODRAFT_257452 [Schizophyllum commune H4-8]
gi|300105053|gb|EFI96458.1| hypothetical protein SCHCODRAFT_257452 [Schizophyllum commune H4-8]
Length = 624
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 219/400 (54%), Positives = 302/400 (75%), Gaps = 5/400 (1%)
Query: 15 PNGVAAGA---SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSL 71
P G AA A N + SLYVG+LD VT+S L+++F+ +G V S+RVCRD TRRSL
Sbjct: 24 PLGYAASAPTHGANTATSASLYVGELDPTVTESMLFEIFNMIGPVASIRVCRDAVTRRSL 83
Query: 72 GYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDH 131
GY YVNY N AD RAL+ LN++ + N+ RIM+S RDP++RK+G GNIFIKNLD+ ID+
Sbjct: 84 GYAYVNYLNAADGERALEQLNYSSIKNRPCRIMWSQRDPALRKTGQGNIFIKNLDEQIDN 143
Query: 132 KALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVG 191
KALHDTF++FGN+LSCK+ATD G SKG+GFV +E E+A+NAI +NGML+NDK+V+VG
Sbjct: 144 KALHDTFAAFGNVLSCKVATDEHGNSKGYGFVHYETAEAAENAIKSVNGMLLNDKKVYVG 203
Query: 192 HFLRKQERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSK 249
+ ++ER++ ++ F N++VKN+D TDE+ + +F +YG + S+++ RD G++
Sbjct: 204 PHISRKERQSKIDEMRAHFTNLYVKNIDPEVTDEEFENLFKQYGQVQSSLLKRDDQGRNL 263
Query: 250 CFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKF 309
FGFVNFE ++A KAV+AL+ F R+ YV +AQKK+ERE EL+ Q++QA +E ++K+
Sbjct: 264 GFGFVNFETHEEAQKAVDALHESDFHGRKLYVARAQKKAEREAELRKQYDQARQERMNKY 323
Query: 310 QGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRAL 369
QG+NLYIKNL D +DDEKL+ F FGTITSC+VMRD G SKG GFV +S P+EA++A+
Sbjct: 324 QGVNLYIKNLEDDVDDEKLRAEFEPFGTITSCRVMRDERGKSKGFGFVCYSAPDEATKAV 383
Query: 370 AEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAM 409
AEMN KMI SKPLYV++AQRKE RR +L++Q +Q + + M
Sbjct: 384 AEMNNKMIGSKPLYVSLAQRKEIRRQQLESQIAQRQQLRM 423
>gi|393216848|gb|EJD02338.1| polyadenylate binding protein [Fomitiporia mediterranea MF3/22]
Length = 701
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 214/383 (55%), Positives = 297/383 (77%), Gaps = 2/383 (0%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
ASG + SLYVG+LD VT++ L+++F+ +G V S+RVCRD TRRSLGY YVNY N
Sbjct: 48 ASGASTPSASLYVGELDSTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNA 107
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
AD RAL+ LN++ + N++ RIM+S RDP++RK+G GNIFIKNLD+ IDHKALHDTF++F
Sbjct: 108 ADGERALEQLNYSLIKNRACRIMWSQRDPALRKTGQGNIFIKNLDEQIDHKALHDTFAAF 167
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GN+LSCK+ATD +G+S+GFGFV ++ E+A AI +NGML+NDK+VFVGH++ K+ER+
Sbjct: 168 GNVLSCKVATDENGRSRGFGFVHYDTAEAADTAIKAVNGMLLNDKKVFVGHYISKKERQA 227
Query: 202 V--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
K++F N++VKNLD TD++ +F ++G +TSAVV +D +GKSK FGFVNF++
Sbjct: 228 HIDEQKSQFTNLYVKNLDTEVTDDEFNDMFAKFGEVTSAVVQKDEEGKSKGFGFVNFKDH 287
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+ A AV+AL+ + + ++ +V +AQKK+ERE+EL+ +EQA E + K+QG NLYIKNL
Sbjct: 288 ESAQAAVDALHDTELNGKKLFVTRAQKKAEREEELRKSYEQAKMEKLSKYQGANLYIKNL 347
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D +DD+KL+ F FGTITSCK+MRD G SKG GFV +S+PEEA++A+AEMN KM+ S
Sbjct: 348 EDDMDDDKLRAEFEPFGTITSCKIMRDEKGTSKGFGFVCYSSPEEATKAVAEMNNKMLGS 407
Query: 380 KPLYVAVAQRKEERRARLQAQFS 402
KPLYV+ AQR+E RR +L++Q +
Sbjct: 408 KPLYVSPAQRREVRRQQLESQIA 430
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 62/104 (59%), Gaps = 2/104 (1%)
Query: 474 PVPVDMGAGIPRR--DASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAA 531
P PV G P +AS G+ ALA A+P Q++ LLGE+LY + +E + A
Sbjct: 593 PAPVQGGPATPATGAEASAGEADVPQITPQALAAATPMQRKQLLGEALYMKIVLMEEELA 652
Query: 532 AKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQA 575
K+TGMLLEM+ E++ LL+S EAL KV EA+ VL A +++
Sbjct: 653 GKITGMLLEMEDDELMGLLDSQEALTGKVNEAIAVLNDFAVKES 696
>gi|74212334|dbj|BAE30919.1| unnamed protein product [Mus musculus]
Length = 636
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 229/406 (56%), Positives = 299/406 (73%), Gaps = 4/406 (0%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
S + SLYVGDL +VT++ LY+ FS G +LS+RVCRD+ TRRSLGY YVN+ PA
Sbjct: 4 SAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPA 63
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
DA RALD +NF + K +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FG
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFG 123
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 202
NILSCK+ D +G SKG+GFV FE +E+A+ AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 124 NILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Query: 203 --AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
A +F NV++KN E DE LK++FG++G S VM D GKSK FGFV+FE +
Sbjct: 183 LGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDEGGKSKGFGFVSFERHE 242
Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
DA KAV+ +NGK+ + ++ YVG+AQKK ER+ ELK +FEQ ++ + ++QG+NLY+KNL
Sbjct: 243 DAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLD 302
Query: 321 DSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSK 380
D IDDE+L++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +K
Sbjct: 303 DGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATK 361
Query: 381 PLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSG 426
PLYVA+AQRKEER+A L Q+ Q P P P PSG
Sbjct: 362 PLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSG 407
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 109/298 (36%), Positives = 172/298 (57%), Gaps = 16/298 (5%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFEN 167
+PS ++++ +L + L++ FS G ILS ++ D + +S G+ +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
A+ A+D +N +I K V + +R+ K+ N+F+KNLD+S ++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYD 117
Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
F +G I S V+ D +G SK +GFV+FE + A +A+E +NG +DR+ +VG+ + +
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
ERE EL + ++ N+YIKN G+ +DDE+LKELF +FG S KVM D
Sbjct: 177 KEREAELGARAKEFT----------NVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDE 226
Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
G SKG GFV+F E+A +A+ EMNGK + K +YV AQ+K ER+ L+ +F QM+
Sbjct: 227 GGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 284
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA+A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 544 PLTA--SMLASAPPQEQKQMLGERLFPLIQAMHPSLAGKITGMLLEIDNSELLHMLESPE 601
Query: 555 ALKAKVAEAMEVLRSVAQQQA 575
+L++KV EA+ VL++ ++A
Sbjct: 602 SLRSKVDEAVAVLQAHQAKEA 622
>gi|291388359|ref|XP_002710763.1| PREDICTED: poly A binding protein, cytoplasmic 4 [Oryctolagus
cuniculus]
Length = 636
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 229/406 (56%), Positives = 298/406 (73%), Gaps = 4/406 (0%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
S + SLYVGDL +VT++ LY+ FS G +LS+RVCRD+ TRRSLGY YVN+ PA
Sbjct: 4 SAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPA 63
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
DA RALD +NF + K +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FG
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFG 123
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 202
NILSCK+ D +G SKG+GFV FE +E+A+ AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 124 NILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Query: 203 --AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
A +F NV++KN E DE LK +FG++G S VM D GKSK FGFV+FE +
Sbjct: 183 LGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHE 242
Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
DA KAV+ +NGK+ + ++ YVG+AQKK ER+ ELK +FEQ ++ + ++QG+NLY+KNL
Sbjct: 243 DAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLD 302
Query: 321 DSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSK 380
D IDDE+L++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +K
Sbjct: 303 DGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATK 361
Query: 381 PLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSG 426
PLYVA+AQRKEER+A L Q+ Q P P P PSG
Sbjct: 362 PLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSG 407
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 109/298 (36%), Positives = 173/298 (58%), Gaps = 16/298 (5%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFEN 167
+PS ++++ +L + L++ FS G ILS ++ D + +S G+ +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
A+ A+D +N +I K V + +R+ K+ N+F+KNLD+S ++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYD 117
Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
F +G I S V+ D +G SK +GFV+FE + A +A+E +NG +DR+ +VG+ + +
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
ERE EL + ++ N+YIKN G+ +DDE+LK+LF +FG S KVM D
Sbjct: 177 KEREAELGARAKEFT----------NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE 226
Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
SG SKG GFV+F E+A +A+ EMNGK + K +YV AQ+K ER+ L+ +F QM+
Sbjct: 227 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 284
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA+A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 544 PLTA--SMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPE 601
Query: 555 ALKAKVAEAMEVLRSVAQQQA 575
+L++KV EA+ VL++ ++A
Sbjct: 602 SLRSKVDEAVAVLQAHQAKEA 622
>gi|41386798|ref|NP_776993.1| polyadenylate-binding protein 1 [Bos taurus]
gi|46367787|ref|NP_002559.2| polyadenylate-binding protein 1 [Homo sapiens]
gi|383872540|ref|NP_001244826.1| polyadenylate-binding protein 1 [Macaca mulatta]
gi|73974130|ref|XP_856708.1| PREDICTED: polyadenylate-binding protein 1 isoform 6 [Canis lupus
familiaris]
gi|194036975|ref|XP_001927782.1| PREDICTED: polyadenylate-binding protein 1 [Sus scrofa]
gi|332213999|ref|XP_003256115.1| PREDICTED: polyadenylate-binding protein 1 [Nomascus leucogenys]
gi|344273312|ref|XP_003408467.1| PREDICTED: polyadenylate-binding protein 1-like [Loxodonta
africana]
gi|402878853|ref|XP_003903080.1| PREDICTED: polyadenylate-binding protein 1 [Papio anubis]
gi|3183544|sp|P11940.2|PABP1_HUMAN RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|47117093|sp|P61286.1|PABP1_BOVIN RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|1562511|gb|AAD08718.1| poly(A)-binding protein [Homo sapiens]
gi|8979741|emb|CAB96752.1| polyadenylate-binding protein 1 [Bos taurus]
gi|16358990|gb|AAH15958.1| PABPC1 protein [Homo sapiens]
gi|23270713|gb|AAH23520.1| Poly(A) binding protein, cytoplasmic 1 [Homo sapiens]
gi|74268035|gb|AAI02366.1| Poly(A) binding protein, cytoplasmic 1 [Bos taurus]
gi|119612221|gb|EAW91815.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_b [Homo
sapiens]
gi|119612223|gb|EAW91817.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_b [Homo
sapiens]
gi|123993665|gb|ABM84434.1| poly(A) binding protein, cytoplasmic 1 [synthetic construct]
gi|123999981|gb|ABM87499.1| poly(A) binding protein, cytoplasmic 1 [synthetic construct]
gi|168278070|dbj|BAG11013.1| polyadenylate-binding protein 1 [synthetic construct]
gi|296480464|tpg|DAA22579.1| TPA: polyadenylate-binding protein 1 [Bos taurus]
gi|380811722|gb|AFE77736.1| polyadenylate-binding protein 1 [Macaca mulatta]
gi|384940022|gb|AFI33616.1| polyadenylate-binding protein 1 [Macaca mulatta]
gi|384940024|gb|AFI33617.1| polyadenylate-binding protein 1 [Macaca mulatta]
Length = 636
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 229/406 (56%), Positives = 298/406 (73%), Gaps = 4/406 (0%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
S + SLYVGDL +VT++ LY+ FS G +LS+RVCRD+ TRRSLGY YVN+ PA
Sbjct: 4 SAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPA 63
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
DA RALD +NF + K +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FG
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFG 123
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 202
NILSCK+ D +G SKG+GFV FE +E+A+ AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 124 NILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Query: 203 --AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
A +F NV++KN E DE LK +FG++G S VM D GKSK FGFV+FE +
Sbjct: 183 LGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHE 242
Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
DA KAV+ +NGK+ + ++ YVG+AQKK ER+ ELK +FEQ ++ + ++QG+NLY+KNL
Sbjct: 243 DAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLD 302
Query: 321 DSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSK 380
D IDDE+L++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +K
Sbjct: 303 DGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATK 361
Query: 381 PLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSG 426
PLYVA+AQRKEER+A L Q+ Q P P P PSG
Sbjct: 362 PLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSG 407
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 109/298 (36%), Positives = 173/298 (58%), Gaps = 16/298 (5%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFEN 167
+PS ++++ +L + L++ FS G ILS ++ D + +S G+ +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
A+ A+D +N +I K V + +R+ K+ N+F+KNLD+S ++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYD 117
Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
F +G I S V+ D +G SK +GFV+FE + A +A+E +NG +DR+ +VG+ + +
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
ERE EL + ++ N+YIKN G+ +DDE+LK+LF +FG S KVM D
Sbjct: 177 KEREAELGARAKEFT----------NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE 226
Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
SG SKG GFV+F E+A +A+ EMNGK + K +YV AQ+K ER+ L+ +F QM+
Sbjct: 227 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 284
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA+A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 544 PLTA--SMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPE 601
Query: 555 ALKAKVAEAMEVLRSVAQQQA 575
+L++KV EA+ VL++ ++A
Sbjct: 602 SLRSKVDEAVAVLQAHQAKEA 622
>gi|26354649|dbj|BAC40951.1| unnamed protein product [Mus musculus]
Length = 636
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 229/406 (56%), Positives = 298/406 (73%), Gaps = 4/406 (0%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
S + SLYVGDL +VT++ LY+ FS G +LS+RVCRD+ TRRSLGY YVN+ PA
Sbjct: 4 SAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPA 63
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
DA RALD +NF + K +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FG
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFG 123
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 202
NILSCK+ D +G SKG+GFV FE +E+A+ AI K+NGML+ND++VFVG F ++ERE
Sbjct: 124 NILSCKVVCDENG-SKGYGFVHFETQEAAERAIKKMNGMLLNDRKVFVGRFKSRKEREAE 182
Query: 203 --AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
A +F NV++KN E DE LK++FG++G S VM D GKSK FGFV+FE +
Sbjct: 183 LGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHE 242
Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
DA KAV+ +NGK+ + ++ YVG+AQKK ER+ ELK +FEQ ++ + ++QG+NLY+KNL
Sbjct: 243 DAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLD 302
Query: 321 DSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSK 380
D IDDE+L++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +K
Sbjct: 303 DGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATK 361
Query: 381 PLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSG 426
PLYVA+AQRKEER+A L Q+ Q P P P PSG
Sbjct: 362 PLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSG 407
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 109/298 (36%), Positives = 173/298 (58%), Gaps = 16/298 (5%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFEN 167
+PS ++++ +L + L++ FS G ILS ++ D + +S G+ +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
A+ A+D +N +I K V + +R+ K+ N+F+KNLD+S ++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYD 117
Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
F +G I S V+ D +G SK +GFV+FE + A +A++ +NG +DR+ +VG+ + +
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIKKMNGMLLNDRKVFVGRFKSR 176
Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
ERE EL + ++ N+YIKN G+ +DDE+LKELF +FG S KVM D
Sbjct: 177 KEREAELGARAKEFT----------NVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDE 226
Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
SG SKG GFV+F E+A +A+ EMNGK + K +YV AQ+K ER+ L+ +F QM+
Sbjct: 227 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 284
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA+A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 544 PLTA--SMLASAPPQEQKQMLGERLFPLIQAMHPSLAGKITGMLLEIDNSELLHMLESPE 601
Query: 555 ALKAKVAEAMEVLRSVAQQQA 575
+L++KV EA+ VL++ ++A
Sbjct: 602 SLRSKVDEAVAVLQAHQAKEA 622
>gi|393245425|gb|EJD52935.1| polyadenylate binding protein [Auricularia delicata TFB-10046 SS5]
Length = 665
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 217/381 (56%), Positives = 295/381 (77%), Gaps = 2/381 (0%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVG+LD +VT++ L+++F+ +G V S+RVCRD TRRSLGY YVNY N AD RALD
Sbjct: 48 SLYVGELDPSVTEAMLFEVFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALDQ 107
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
LN++ + N++ RIM+S RDP++RK+G GNIFIKNLD+ ID+KALHDTF++FGN+LSCK+A
Sbjct: 108 LNYSLIKNRACRIMWSQRDPALRKTGQGNIFIKNLDEQIDNKALHDTFAAFGNVLSCKVA 167
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTKF 208
TD G SKG+GFV +E E+A+NAI +NGML+NDK+VFVGH + ++ER++ +K ++
Sbjct: 168 TDEHGNSKGYGFVHYETAEAAENAIKSVNGMLLNDKKVFVGHHIPRKERQSKIDEMKAQY 227
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
N++VKNLD E +++FG++G ITSA + +D +GKS+ FGFVNFE+ + AA AVE
Sbjct: 228 TNIYVKNLDPELGQEGFEELFGKFGNITSAALSKDEEGKSRGFGFVNFESHEQAAAAVET 287
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
L+ + + R+ YV +AQKKSERE EL+ +E A +E + K+QG+NLYIKNL D IDDEKL
Sbjct: 288 LHDTEINGRKLYVARAQKKSEREDELRKSYENAKQEKLSKYQGVNLYIKNLEDDIDDEKL 347
Query: 329 KELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
+ F FGTITSCKVMRD SKG GFV FS+P+EA++A++EMN KMI SKPLYV++AQ
Sbjct: 348 RAEFEPFGTITSCKVMRDEKNTSKGFGFVCFSSPDEATKAVSEMNNKMIGSKPLYVSLAQ 407
Query: 389 RKEERRARLQAQFSQMRPVAM 409
R+E RR +L+ Q +Q + M
Sbjct: 408 RREVRRQQLETQIAQRNQIRM 428
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 498 ALSTALANAS-PEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEAL 556
A A+ANAS P +Q+ ++GE +Y + + + A K+TGMLLEMD ++ LLE+ EAL
Sbjct: 587 AQQAAIANASSPMEQKQVIGEMIYMKIYSTQPELAGKITGMLLEMDNQALIQLLENNEAL 646
Query: 557 KAKVAEAMEVLRSVAQQQA 575
KV EA+ VL +QQA
Sbjct: 647 TGKVDEAIAVLNEYTKQQA 665
>gi|431901758|gb|ELK08635.1| Polyadenylate-binding protein 1 [Pteropus alecto]
Length = 636
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 229/406 (56%), Positives = 298/406 (73%), Gaps = 4/406 (0%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
S + SLYVGDL +VT++ LY+ FS G +LS+RVCRD+ TRRSLGY YVN+ PA
Sbjct: 4 SAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPA 63
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
DA RALD +NF + K +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FG
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFG 123
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 202
NILSCK+ D +G SKG+GFV FE +E+A+ AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 124 NILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Query: 203 --AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
A +F NV++KN E DE LK +FG++G S VM D GKSK FGFV+FE +
Sbjct: 183 LGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHE 242
Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
DA KAV+ +NGK+ + ++ YVG+AQKK ER+ ELK +FEQ ++ + ++QG+NLY+KNL
Sbjct: 243 DAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLD 302
Query: 321 DSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSK 380
D IDDE+L++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +K
Sbjct: 303 DGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATK 361
Query: 381 PLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSG 426
PLYVA+AQRKEER+A L Q+ Q P P P PSG
Sbjct: 362 PLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSG 407
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 109/298 (36%), Positives = 173/298 (58%), Gaps = 16/298 (5%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFEN 167
+PS ++++ +L + L++ FS G ILS ++ D + +S G+ +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
A+ A+D +N +I K V + +R+ K+ N+F+KNLD+S ++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYD 117
Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
F +G I S V+ D +G SK +GFV+FE + A +A+E +NG +DR+ +VG+ + +
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
ERE EL + ++ N+YIKN G+ +DDE+LK+LF +FG S KVM D
Sbjct: 177 KEREAELGARAKEFT----------NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE 226
Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
SG SKG GFV+F E+A +A+ EMNGK + K +YV AQ+K ER+ L+ +F QM+
Sbjct: 227 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 284
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA+A P++Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 544 PLTA--SMLASAPPQEQKQMLGERLFPLIQAMHPNLAGKITGMLLEIDNSELLHMLESPE 601
Query: 555 ALKAKVAEAMEVLRSVAQQQA 575
+L++KV EA+ VL++ ++A
Sbjct: 602 SLRSKVDEAVAVLQAHQAKEA 622
>gi|403216743|emb|CCK71239.1| hypothetical protein KNAG_0G01810 [Kazachstania naganishii CBS
8797]
Length = 596
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 262/561 (46%), Positives = 353/561 (62%), Gaps = 40/561 (7%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A N +TSLYVG+LD +V+++ LYDLFS +G V S+RVCRD T+ SLGY YVN+++
Sbjct: 39 AGDNDVTSTSLYVGELDPSVSEALLYDLFSPIGSVASIRVCRDAITKTSLGYAYVNFSDH 98
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
+A++ LN+TP+ K RIM+S RDPS+RK G GNIFIKNL++ ID+KAL DTFS F
Sbjct: 99 EAGKQAIEKLNYTPIKGKLCRIMWSQRDPSLRKKGHGNIFIKNLNQDIDNKALFDTFSVF 158
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILS KIATD +G+SKGFGFV FE + +A AID LNGML+N ++++V L ++ER++
Sbjct: 159 GNILSSKIATDETGKSKGFGFVHFEEESAANEAIDALNGMLLNGQEIYVAPHLTRKERDS 218
Query: 202 VAIKTK--FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+TK F NV+VKN+D TTDE+ K+ FG+ GT+TS + R DGK K FGFVN+E+
Sbjct: 219 QLEETKAHFTNVYVKNIDLETTDEEFKEFFGKIGTVTSVALERGPDGKLKGFGFVNYEDH 278
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAVE LNG +F D+E +VG+AQKK ER Q LK Q+E E + K+QG+NL++KNL
Sbjct: 279 NDAVKAVEELNGAEFKDQELFVGRAQKKYERIQSLKKQYESTRLEKMAKYQGVNLFVKNL 338
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
DSIDDEKL+E F+ FG ITS KVMR +G SKG GFV FS+PEEA++A+ E N +++
Sbjct: 339 DDSIDDEKLQEEFAPFGNITSVKVMRTENGKSKGFGFVCFSSPEEATKAITEKNQQIVAG 398
Query: 380 KPLYVAVAQRKEERRARLQAQF---SQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQA 436
KPLYVA+AQRK+ RR++L Q +QMR + P GQ
Sbjct: 399 KPLYVAIAQRKDVRRSQLAQQIQARNQMRYQQATAAAAAAAAGIP------------GQF 446
Query: 437 PPAIIPPQMPPRGHAYRYPLGRNMQDFP---FDMGAGSMLPVPVDMGAGIPRRDASVGQP 493
P + MPPRG + P + M P F G +P PR
Sbjct: 447 MPPMFYGVMPPRGVPFNGPNPQQMNGVPPQQFRNGPMYGMPPQGAPQGAFPR-------- 498
Query: 494 MPITALSTALANAS---PEQQRTLLGESLYPLV--EQLERDAAAKVTGMLLEMDQTEVLH 548
A ANA+ ++QR LGE LY + + + +AA K+TGM+L++ EV+
Sbjct: 499 -------NAGANANQFYQQKQRQALGEQLYKKISAKTSDEEAAGKITGMILDLPPQEVVS 551
Query: 549 LLESPEALKAKVAEAMEVLRS 569
LLE+ + + EA S
Sbjct: 552 LLENDDLFEQHFTEASAAYES 572
>gi|444321552|ref|XP_004181432.1| hypothetical protein TBLA_0F03780 [Tetrapisispora blattae CBS 6284]
gi|387514476|emb|CCH61913.1| hypothetical protein TBLA_0F03780 [Tetrapisispora blattae CBS 6284]
Length = 577
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 260/576 (45%), Positives = 356/576 (61%), Gaps = 41/576 (7%)
Query: 4 IQVQHQAQMSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCR 63
IQ + A + A + + +T SLYVG+LD +V+++ LYD+FS +G V S+RVCR
Sbjct: 17 IQDEQPAATPATTAIEAESPNVENVTASLYVGELDPSVSEALLYDIFSPIGSVSSIRVCR 76
Query: 64 DLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIK 123
D T+ SLGY YVN+ + A++ LN+T + + RIM+S RDPS+RK G+GNIFIK
Sbjct: 77 DAITKTSLGYAYVNFNDHEAGKTAIEKLNYTAIKGRPCRIMWSQRDPSMRKKGSGNIFIK 136
Query: 124 NLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLI 183
NL ID+K L++TFS FGNILSCKIA D +G+SKGFGFV FEN+E+A+ AID +NGML+
Sbjct: 137 NLHPDIDNKTLYETFSVFGNILSCKIANDETGKSKGFGFVHFENEEAAREAIDAINGMLL 196
Query: 184 NDKQVFVGHFLRKQERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVM 241
N ++V+V + K++R++ + F NV+VKNLD T+ED + +F YGTITS +
Sbjct: 197 NGQEVYVAPHVSKKDRQSKLDEARANFTNVYVKNLDLEATEEDFENLFKPYGTITSVALE 256
Query: 242 RDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQA 301
+D +GKS+ FGFV+FEN +DA KAVEALN ++ + YVG+AQKK ER QELK Q++ +
Sbjct: 257 KDAEGKSRGFGFVDFENHEDAVKAVEALNDTEYKGQTLYVGRAQKKYERLQELKKQYQAS 316
Query: 302 MKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFST 361
E + K+QG+NL+IKNL DSIDDEKLKE F+ FGTITS +VMR +G SKG GFV FST
Sbjct: 317 KLEKLAKYQGINLFIKNLDDSIDDEKLKEEFAPFGTITSARVMRTENGKSKGFGFVCFST 376
Query: 362 PEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQF---SQMRPVAMGPSVPPRMP 418
PEEA+RA+ E N +++ KPLYVA+AQRK+ RR++L Q +QMR +
Sbjct: 377 PEEATRAITEKNQQIVAGKPLYVAIAQRKDVRRSQLAQQIQARNQMRYQQATAAAAAAAA 436
Query: 419 MYPPGPSGLGQQFLYGQAPPAIIPPQMPPRGHAYRYPLGRNMQDFP---FDMGAGSMLPV 475
P GQ P + +PPRG + P + + P F G +P
Sbjct: 437 GIP------------GQFMPPMFYGVVPPRGMPFNGPNPQQLGGMPPQQFRNGPAYGMPP 484
Query: 476 PVDMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLV--EQLERDAAAK 533
P G PR D Q ++QR LGE LY V + + +AA K
Sbjct: 485 P---QGGFPRNDNQFYQ----------------QKQRQALGEQLYKKVSAKTSDEEAAGK 525
Query: 534 VTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRS 569
+TGM+L++ EV+ LLE+ E + EA S
Sbjct: 526 ITGMILDLPAQEVVPLLENDELFEQHFNEAFAAYES 561
>gi|71896197|ref|NP_001026768.1| polyadenylate-binding protein 1 [Gallus gallus]
gi|53130422|emb|CAG31540.1| hypothetical protein RCJMB04_7l20 [Gallus gallus]
Length = 637
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 228/406 (56%), Positives = 299/406 (73%), Gaps = 4/406 (0%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
S + SLYVGDL +VT++ LY+ FS G +LS+RVCRD+ TRRSLGY YVN+ PA
Sbjct: 4 SAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPA 63
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
DA RALD +NF + K +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FG
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFG 123
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 202
NILSCK+ D +G SKG+GFV FE +E+A+ AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 124 NILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Query: 203 --AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
A +F NV++KN E DE LK++FG++G S VM D GKSK FGFV+FE +
Sbjct: 183 LGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHE 242
Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
DA KAV+ +NGK+ + ++ YVG+AQK+ ER+ ELK +FEQ ++ + ++QG+NLY+KNL
Sbjct: 243 DAQKAVDEMNGKELNGKQIYVGRAQKRVERQTELKRKFEQMKQDRITRYQGVNLYVKNLD 302
Query: 321 DSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSK 380
D IDDE+L++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +K
Sbjct: 303 DGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATK 361
Query: 381 PLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSG 426
PLYVA+AQRKEER+A L Q+ Q P P P PSG
Sbjct: 362 PLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSG 407
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 109/298 (36%), Positives = 173/298 (58%), Gaps = 16/298 (5%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFEN 167
+PS ++++ +L + L++ FS G ILS ++ D + +S G+ +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
A+ A+D +N +I K V + +R+ K+ N+F+KNLD+S ++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYD 117
Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
F +G I S V+ D +G SK +GFV+FE + A +A+E +NG +DR+ +VG+ + +
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
ERE EL + ++ N+YIKN G+ +DDE+LKELF +FG S KVM D
Sbjct: 177 KEREAELGARAKEFT----------NVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDE 226
Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
SG SKG GFV+F E+A +A+ EMNGK + K +YV AQ++ ER+ L+ +F QM+
Sbjct: 227 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKRVERQTELKRKFEQMK 284
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 65/89 (73%), Gaps = 7/89 (7%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA+A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 545 PLTA--SMLASAPPQEQKQMLGERLFPLIQSMHPTLAGKITGMLLEIDNSELLHMLESPE 602
Query: 555 ALKAKVAEAMEVL-----RSVAQQQANNP 578
+L++KV EA+ VL + AQ+ NNP
Sbjct: 603 SLRSKVDEAVAVLQAHQAKEAAQKAVNNP 631
>gi|348529271|ref|XP_003452137.1| PREDICTED: polyadenylate-binding protein 1-like [Oreochromis
niloticus]
Length = 635
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 228/406 (56%), Positives = 297/406 (73%), Gaps = 4/406 (0%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
S + SLYVGDL +VT++ LY+ FS G +LS+RVCRD+ TRRSLGY YVN+ PA
Sbjct: 4 SAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPA 63
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
DA RALD +NF + + +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FG
Sbjct: 64 DAERALDTMNFDVIKGRPLRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFG 123
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 202
NILSCK+ D +G SKG+GFV FE E+A+ AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 124 NILSCKVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Query: 203 --AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
A +F NV++KN E DE LK++F +YG S VM D GKSK FGFV+FE +
Sbjct: 183 LGARAREFTNVYIKNFGEDMDDEKLKELFSKYGPALSIRVMTDESGKSKGFGFVSFERHE 242
Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
DA KAV+ +NGK+ + R+ YVG+AQKK ER+ ELK +FEQ ++ + ++QG+NLY+KNL
Sbjct: 243 DAQKAVDEMNGKELNGRQVYVGRAQKKGERQNELKRKFEQMKQDRMTRYQGVNLYVKNLD 302
Query: 321 DSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSK 380
D +DDE+L++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +K
Sbjct: 303 DGLDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATK 361
Query: 381 PLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSG 426
PLYVA+AQRKEER+A L Q+ Q P P P PSG
Sbjct: 362 PLYVALAQRKEERQAHLTNQYMQRMATVRAVPNPVLNPYQPAPPSG 407
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 107/298 (35%), Positives = 173/298 (58%), Gaps = 16/298 (5%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFEN 167
+PS ++++ +L + L++ FS G ILS ++ D + +S G+ +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
A+ A+D +N +I + + + +R+ K+ N+F+KNLD+S ++ L
Sbjct: 62 PADAERALDTMNFDVIKGRPLRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYD 117
Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
F +G I S V+ D +G SK +GFV+FE + A +A+E +NG +DR+ +VG+ + +
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
ERE EL + + N+YIKN G+ +DDEKLKELFS++G S +VM D
Sbjct: 177 KEREAELGARAREF----------TNVYIKNFGEDMDDEKLKELFSKYGPALSIRVMTDE 226
Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
SG SKG GFV+F E+A +A+ EMNGK + + +YV AQ+K ER+ L+ +F QM+
Sbjct: 227 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGRQVYVGRAQKKGERQNELKRKFEQMK 284
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 66/89 (74%), Gaps = 6/89 (6%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 544 PLTA--SMLAAAPPQEQKQMLGERLFPLIQNMHPSLAGKITGMLLEIDNSELLHMLESPE 601
Query: 555 ALKAKVAEAMEVLRS----VAQQQANNPA 579
+L++KV EA+ VL++ A Q+++ PA
Sbjct: 602 SLRSKVDEAVAVLQAHQAKEAAQKSSTPA 630
>gi|254567738|ref|XP_002490979.1| Poly(A) binding protein, part of the 3'-end RNA-processing complex,
mediates interactions between th [Komagataella pastoris
GS115]
gi|238030776|emb|CAY68699.1| Poly(A) binding protein, part of the 3'-end RNA-processing complex,
mediates interactions between th [Komagataella pastoris
GS115]
gi|328352488|emb|CCA38887.1| Polyadenylate-binding protein, cytoplasmic and nuclear
[Komagataella pastoris CBS 7435]
Length = 626
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 258/573 (45%), Positives = 352/573 (61%), Gaps = 58/573 (10%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVG+LD VT+S LY+ FS +G V S+RVCRD T+RSLGYGYVN+ + A RAL+
Sbjct: 53 SLYVGELDPTVTESDLYEFFSPIGSVNSIRVCRDAVTKRSLGYGYVNFHSQAAGERALEE 112
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
LN+ + R+M+S RDPS+R+SG+GNIFIKNLD +I++K LHDTFSSFG +LSCK+A
Sbjct: 113 LNYAEIKGVRCRLMWSQRDPSLRRSGSGNIFIKNLDPAIENKTLHDTFSSFGKVLSCKVA 172
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET--VAIKTKF 208
TD +G SKGFGFV +E+ E+AQ AI+ +NGML+N ++++VG L K++RE+ + +
Sbjct: 173 TDENGNSKGFGFVHYESDEAAQAAIENINGMLLNGREIYVGPHLAKKDRESRFQEMIKNY 232
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NVFVKN D +T+++L+++F YG ITS + D +G +K FGFVNF DDA KAVEA
Sbjct: 233 TNVFVKNFDTESTEDELRELFESYGPITSIHLQVDSEGHNKGFGFVNFAEHDDAVKAVEA 292
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
LN K++ + YVG+AQKK+ER EL ++E E + K+Q +NL+IKNL +SIDD +L
Sbjct: 293 LNDKEYKGKPLYVGRAQKKNERVHELTKKYEADRLEKLQKYQSVNLFIKNLDESIDDARL 352
Query: 329 KELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
+E F FGTITS KVM D +G S+G GFV STPEEA++A++EMN +M+ +KPLYVA+AQ
Sbjct: 353 EEEFKPFGTITSAKVMLDENGKSRGFGFVCLSTPEEATKAISEMNQRMVANKPLYVALAQ 412
Query: 389 RKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPPQMPPR 448
K RR++L Q + M P + P+ Q YGQ P ++PP
Sbjct: 413 PKAIRRSQLAQQIQARNQMRMQQQAGPGI------PNQFVQPIFYGQQ-PGMLPP----- 460
Query: 449 GHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPI------------ 496
A P+G + F AG P P G PR A GQPMP+
Sbjct: 461 -GARVPPMGNQIPQF-----AGMPRPGPFPQGQ-FPRM-APNGQPMPVYGQPVFNGNGPQ 512
Query: 497 --------------------TALSTALANASPEQQRTLLGESLYPLVEQLER----DAAA 532
+L+ L EQQ+ +LGE LYP V + +AA
Sbjct: 513 QRGYYPNNRQNKNRNQKEEGNSLAAILPQLPLEQQKRVLGEELYPKVVATNKTQDPEAAG 572
Query: 533 KVTGMLLEMDQTEVLHLLESPEALKAKVAEAME 565
K+TGM+L++D E+L LLE E EA++
Sbjct: 573 KITGMILDLDNQEILQLLEDEELFNTHFNEALQ 605
>gi|448112633|ref|XP_004202146.1| Piso0_001626 [Millerozyma farinosa CBS 7064]
gi|359465135|emb|CCE88840.1| Piso0_001626 [Millerozyma farinosa CBS 7064]
Length = 625
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 257/553 (46%), Positives = 356/553 (64%), Gaps = 38/553 (6%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVG+L+ +V ++ L+++FS VGQV S+RVCRD T++SLGY YVN+ D +A+
Sbjct: 49 SASLYVGELNPSVNEALLFEIFSPVGQVSSIRVCRDAVTKKSLGYAYVNFHKLEDGEKAI 108
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LN++ ++ + RIM+S RDPS+R++G GNIFIKNL +ID+KALHDTFS+FG ILSCK
Sbjct: 109 EELNYSLIDGRPCRIMWSQRDPSLRRNGEGNIFIKNLHPAIDNKALHDTFSAFGKILSCK 168
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKT 206
+ATD G SK FGFV +E E+A+ AI+ +NGML+ND++V+VG + K++RE+ +K
Sbjct: 169 VATDEQGNSKCFGFVHYETAEAAKAAIENVNGMLLNDREVYVGKHVSKKDRESKFEEMKA 228
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
F NV+VKN+D ++E+++K+F YG ITS + +D +GKSK FGFVNFE+ + A KAV
Sbjct: 229 NFTNVYVKNIDLGFSEEEMRKLFEPYGKITSLHLEKDAEGKSKGFGFVNFESHEAAVKAV 288
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
E LN K + ++ YVG+AQKK ER +ELK Q+E A E + K+QG+NL++KNL DSID
Sbjct: 289 EELNDKDINGQKLYVGRAQKKRERIEELKRQYEAARLEKLSKYQGVNLFVKNLDDSIDSV 348
Query: 327 KLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 386
KL+E F FGTITS +VM D G SKG GFV FS+PEEA++A+ EMN +M KPLYVA+
Sbjct: 349 KLEEEFKPFGTITSARVMVDEHGKSKGFGFVCFSSPEEATKAITEMNQRMFHGKPLYVAL 408
Query: 387 AQRKEERRARLQAQFSQMRPVAM----------GPSVPPRMPMYPPG---PSGLGQQFLY 433
AQRK+ RR++L+ Q + M G +PP PG P+G G
Sbjct: 409 AQRKDVRRSQLEQQIQARNQMRMQNAAATGGIPGQFIPPMFYGQQPGFFPPNGRGSAPFP 468
Query: 434 GQAPPAIIPPQM--PPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAG--------- 482
G P ++P PP+G R G N Q P + PV D A
Sbjct: 469 GPNPQMMVPRGQIPPPQGQWPR--AGPNGQPVP----VYGIPPVYGDFAAANGGRQQRGY 522
Query: 483 IPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLER----DAAAKVTGML 538
P R G+P L+ LA+A +QQ+ +LGE LYP + R +AA K+TGM+
Sbjct: 523 YPNRQNQKGRPQ--KDLAALLASAPVDQQKRILGEELYPKIVSTGRAQEPEAAGKITGMM 580
Query: 539 LEMDQTEVLHLLE 551
L++D E+L LLE
Sbjct: 581 LDLDNQEILALLE 593
>gi|290981403|ref|XP_002673420.1| polyadenylate binding protein [Naegleria gruberi]
gi|284087003|gb|EFC40676.1| polyadenylate binding protein [Naegleria gruberi]
Length = 571
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 259/563 (46%), Positives = 365/563 (64%), Gaps = 24/563 (4%)
Query: 27 FLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAAR 86
+ + SLYVGDL ++++ L+DLF +VG ++S+R+CRD TR+SLGY YVN+ NP DA R
Sbjct: 3 YSSASLYVGDLHEEISEALLFDLFHEVGPIISIRICRDAMTRKSLGYAYVNFQNPQDAER 62
Query: 87 ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
ALD LN+ + IRIM+S RDPSIRKSG GNIFIKNLDKSID+KAL+DTFS+FGNILS
Sbjct: 63 ALDTLNYASVKGIPIRIMWSQRDPSIRKSGIGNIFIKNLDKSIDNKALYDTFSAFGNILS 122
Query: 147 CKIAT-----DGSG---QSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQE 198
CK+ D G +S G+GFV FE +E+A+ AI K+NGML+N KQVFVG F++K E
Sbjct: 123 CKVCQATKKGDNGGDNVESAGYGFVHFETQEAAEKAIAKINGMLLNGKQVFVGPFVKKTE 182
Query: 199 R-ETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFE 257
R + ++ + F N++VKNLD S +++L ++F ++G I +AVVMR +G SK FGF+NF
Sbjct: 183 RLKILSNEDSFTNIYVKNLDASVDEKELSEVFSKFGEIQNAVVMRGENGASKEFGFINFA 242
Query: 258 NADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIK 317
+ A A++ +N K F +++ +VG+AQKK+ER +LK F++ +E V+K++GLNLY+K
Sbjct: 243 DHASALIAIDEMNEKDFKNKKLFVGRAQKKNERRAKLKEYFQKLKQEKVNKYKGLNLYVK 302
Query: 318 NLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMI 377
NL DS+DDE+L++ FS+FG ITS KVM D + S+G GFV F TPE A++AL EM+G MI
Sbjct: 303 NLDDSVDDERLRQEFSKFGDITSAKVMSD-NKQSRGFGFVCFKTPEAANKALTEMSGHMI 361
Query: 378 VSKPLYVAVAQRKEERRARLQAQFS-----QMRPVAMGPSVPPRMPMYPPGPSGLGQQF- 431
SKPLYV AQ KE RR++L+AQ++ QM P M P +PP S + ++
Sbjct: 362 GSKPLYVNFAQPKELRRSQLEAQYNARKQPQMIPQMMPQFFIPAQGAFPPPGSQIKPRWQ 421
Query: 432 -LYGQAPPAIIPPQMPPRGHAYRYPLG------RNMQDFPFDMGAGSMLPVPVDMGAGIP 484
+ G M G + R G +N ++ A + P
Sbjct: 422 PVAGGRQSNQNRGGMSRGGSSQRGARGGNANTAKNAGRIKYNNNARNQ-PREQPQQTTPN 480
Query: 485 RRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQT 544
++A Q + LA S + Q+ LLGE L+PLV E A K+TGMLL+M+ +
Sbjct: 481 TQEAQTTQAPSDQLTAEYLAKLSEQDQKQLLGERLFPLVHLREPKNAPKITGMLLDMEVS 540
Query: 545 EVLHLLESPEALKAKVAEAMEVL 567
++L L+ES +AL K+ EA++VL
Sbjct: 541 DILTLIESTDALNQKIKEAVKVL 563
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
N++ +LYV +LD +V D +L FS+ G + S +V D ++S G+G+V + P A
Sbjct: 292 NKYKGLNLYVKNLDDSVDDERLRQEFSKFGDITSAKVMSD--NKQSRGFGFVCFKTPEAA 349
Query: 85 ARALDVLNFTPLNNKSIRIMYSH 107
+AL ++ + +K + + ++
Sbjct: 350 NKALTEMSGHMIGSKPLYVNFAQ 372
>gi|193787802|dbj|BAG53005.1| unnamed protein product [Homo sapiens]
Length = 636
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 228/406 (56%), Positives = 298/406 (73%), Gaps = 4/406 (0%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
S + SLYVGDL +VT++ LY+ FS G +LS+RVCRD+ TRRSLGY YVN+ PA
Sbjct: 4 SAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPA 63
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
DA RALD +NF + K +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FG
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFG 123
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 202
NILSCK+ D +G SKG+GFV FE +E+A+ AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 124 NILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Query: 203 --AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
A +F NV++KN E DE LK +FG++G S VM D GKSK FGFV+FE +
Sbjct: 183 LGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGAALSVKVMTDESGKSKGFGFVSFERHE 242
Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
DA KAV+ +NGK+ + ++ YVG+AQKK ER+ ELK +FEQ ++ + ++QG+NLY+KNL
Sbjct: 243 DAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLD 302
Query: 321 DSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSK 380
D I+DE+L++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +K
Sbjct: 303 DGINDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATK 361
Query: 381 PLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSG 426
PLYVA+AQRKEER+A L Q+ Q P P P PSG
Sbjct: 362 PLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSG 407
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 109/298 (36%), Positives = 173/298 (58%), Gaps = 16/298 (5%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFEN 167
+PS ++++ +L + L++ FS G ILS ++ D + +S G+ +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
A+ A+D +N +I K V + +R+ K+ N+F+KNLD+S ++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYD 117
Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
F +G I S V+ D +G SK +GFV+FE + A +A+E +NG +DR+ +VG+ + +
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
ERE EL + ++ N+YIKN G+ +DDE+LK+LF +FG S KVM D
Sbjct: 177 KEREAELGARAKEFT----------NVYIKNFGEDMDDERLKDLFGKFGAALSVKVMTDE 226
Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
SG SKG GFV+F E+A +A+ EMNGK + K +YV AQ+K ER+ L+ +F QM+
Sbjct: 227 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 284
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA+A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 544 PLTA--SMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPE 601
Query: 555 ALKAKVAEAMEVLRSVAQQQA 575
+L++KV EA+ VL++ ++A
Sbjct: 602 SLRSKVDEAVAVLQAHQAKEA 622
>gi|207080212|ref|NP_001128842.1| polyadenylate-binding protein 1 [Pongo abelii]
gi|75070631|sp|Q5R8F7.1|PABP1_PONAB RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|55730462|emb|CAH91953.1| hypothetical protein [Pongo abelii]
Length = 636
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 228/406 (56%), Positives = 297/406 (73%), Gaps = 4/406 (0%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
S + SLYVGDL + T++ LY+ FS G +LS+RVCRD+ TRRSLGY YVN+ PA
Sbjct: 4 SAPSYPMASLYVGDLHPDATEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPA 63
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
DA RALD +NF + K +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FG
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFG 123
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 202
NILSCK+ D +G SKG+GFV FE +E+A+ AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 124 NILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Query: 203 --AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
A +F NV++KN E DE LK +FG++G S VM D GKSK FGFV+FE +
Sbjct: 183 LGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHE 242
Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
DA KAV+ +NGK+ + ++ YVG+AQKK ER+ ELK +FEQ ++ + ++QG+NLY+KNL
Sbjct: 243 DAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLD 302
Query: 321 DSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSK 380
D IDDE+L++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +K
Sbjct: 303 DGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATK 361
Query: 381 PLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSG 426
PLYVA+AQRKEER+A L Q+ Q P P P PSG
Sbjct: 362 PLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSG 407
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 109/298 (36%), Positives = 172/298 (57%), Gaps = 16/298 (5%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFEN 167
+PS ++++ +L L++ FS G ILS ++ D + +S G+ +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDATEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
A+ A+D +N +I K V + +R+ K+ N+F+KNLD+S ++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYD 117
Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
F +G I S V+ D +G SK +GFV+FE + A +A+E +NG +DR+ +VG+ + +
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
ERE EL + ++ N+YIKN G+ +DDE+LK+LF +FG S KVM D
Sbjct: 177 KEREAELGARAKEFT----------NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE 226
Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
SG SKG GFV+F E+A +A+ EMNGK + K +YV AQ+K ER+ L+ +F QM+
Sbjct: 227 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 284
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA+A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 544 PLTA--SMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPE 601
Query: 555 ALKAKVAEAMEVLRSVAQQQA 575
+L++KV EA+ VL++ ++A
Sbjct: 602 SLRSKVDEAVAVLQAHQAKEA 622
>gi|197097606|ref|NP_001126097.1| polyadenylate-binding protein 1 [Pongo abelii]
gi|55730342|emb|CAH91893.1| hypothetical protein [Pongo abelii]
Length = 636
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 229/406 (56%), Positives = 297/406 (73%), Gaps = 4/406 (0%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
S + SLYVGDL +VT++ LY+ FS G +LS+RVCRD+ TRRSLGY YVN+ PA
Sbjct: 4 SAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPA 63
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
DA RALD +NF + K +RIM+S RDPS+RKSG GNIFIKNLDKSID KAL+DTFS+FG
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDIKALYDTFSAFG 123
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 202
NILSCK+ D +G SKG+GFV FE +E+A+ AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 124 NILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Query: 203 --AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
A +F NV++KN E DE LK +FG++G S VM D GKSK FGFV+FE +
Sbjct: 183 LGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHE 242
Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
DA KAV+ +NGK+ + ++ YVG+AQKK ER+ ELK +FEQ ++ + ++QG+NLY+KNL
Sbjct: 243 DAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLD 302
Query: 321 DSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSK 380
D IDDE+L++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +K
Sbjct: 303 DGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRVVATK 361
Query: 381 PLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSG 426
PLYVA+AQRKEER+A L Q+ Q P P P PSG
Sbjct: 362 PLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSG 407
Score = 191 bits (486), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 109/298 (36%), Positives = 172/298 (57%), Gaps = 16/298 (5%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFEN 167
+PS ++++ +L + L++ FS G ILS ++ D + +S G+ +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
A+ A+D +N +I K V + +R+ K+ N+F+KNLD+S + L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDIKALYD 117
Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
F +G I S V+ D +G SK +GFV+FE + A +A+E +NG +DR+ +VG+ + +
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
ERE EL + ++ N+YIKN G+ +DDE+LK+LF +FG S KVM D
Sbjct: 177 KEREAELGARAKEFT----------NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE 226
Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
SG SKG GFV+F E+A +A+ EMNGK + K +YV AQ+K ER+ L+ +F QM+
Sbjct: 227 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 284
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA+A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 544 PLTA--SMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPE 601
Query: 555 ALKAKVAEAMEVLRSVAQQQA 575
+L++KV EA+ VL++ ++A
Sbjct: 602 SLRSKVDEAVAVLQAHQAKEA 622
>gi|72534835|ref|NP_001026846.1| poly A binding protein, cytoplasmic 1 a [Danio rerio]
gi|71534060|gb|AAH99992.1| Poly A binding protein, cytoplasmic 1 a [Danio rerio]
Length = 634
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 227/406 (55%), Positives = 298/406 (73%), Gaps = 4/406 (0%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
S + SLYVGDL +VT++ LY+ FS G +LS+RVCRD+ TRRSLGY YVN+ PA
Sbjct: 4 SAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMMTRRSLGYAYVNFQQPA 63
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
DA RALD +NF + + +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FG
Sbjct: 64 DAERALDTMNFDVIKGRPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFG 123
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 202
NILSCK+ D +G SKG+GFV FE E+A+ AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 124 NILSCKVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Query: 203 --AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
A +F NV++KN E DE LK+IF +YG S VM D GKSK FGFV+FE +
Sbjct: 183 MGARAKEFTNVYIKNFGEDMDDEKLKEIFCKYGPALSIRVMTDDSGKSKGFGFVSFERHE 242
Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
DA +AV+ +NGK+ + ++ YVG+AQKK ER+ ELK +FEQ ++ + ++QG+NLY+KNL
Sbjct: 243 DAQRAVDEMNGKEMNGKQVYVGRAQKKGERQTELKRKFEQMKQDRMTRYQGVNLYVKNLD 302
Query: 321 DSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSK 380
D +DDE+L++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +K
Sbjct: 303 DGLDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATK 361
Query: 381 PLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSG 426
PLYVA+AQRKEER+A L +Q+ Q P P P PSG
Sbjct: 362 PLYVALAQRKEERQAHLTSQYMQRMASVRAVPNPVLNPYQPAPPSG 407
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 107/298 (35%), Positives = 173/298 (58%), Gaps = 16/298 (5%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATD-GSGQSKGFGFVQFEN 167
+PS ++++ +L + L++ FS G ILS ++ D + +S G+ +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMMTRRSLGYAYVNFQQ 61
Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
A+ A+D +N +I + V + +R+ K+ N+F+KNLD+S ++ L
Sbjct: 62 PADAERALDTMNFDVIKGRPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYD 117
Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
F +G I S V+ D +G SK +GFV+FE + A +A+E +NG +DR+ +VG+ + +
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
ERE E+ + ++ N+YIKN G+ +DDEKLKE+F ++G S +VM D
Sbjct: 177 KEREAEMGARAKEF----------TNVYIKNFGEDMDDEKLKEIFCKYGPALSIRVMTDD 226
Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
SG SKG GFV+F E+A RA+ EMNGK + K +YV AQ+K ER+ L+ +F QM+
Sbjct: 227 SGKSKGFGFVSFERHEDAQRAVDEMNGKEMNGKQVYVGRAQKKGERQTELKRKFEQMK 284
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 64/90 (71%), Gaps = 7/90 (7%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 543 PLTA--SMLAAAPPQEQKQMLGERLFPLIQNMHPSLAGKITGMLLEIDNSELLHMLESPE 600
Query: 555 ALKAKVAEAMEVL-----RSVAQQQANNPA 579
+L++KV EA+ VL + AQ+ +PA
Sbjct: 601 SLRSKVDEAVAVLQAHQAKEAAQKSVPSPA 630
>gi|410904819|ref|XP_003965889.1| PREDICTED: polyadenylate-binding protein 1-like [Takifugu rubripes]
Length = 636
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 228/406 (56%), Positives = 297/406 (73%), Gaps = 4/406 (0%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
S + SLYVGDL +VT++ LY+ FS G +LS+RVCRD+ TRRSLGY YVN+ PA
Sbjct: 4 SAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPA 63
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
DA RALD +NF + + +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FG
Sbjct: 64 DAERALDTMNFDVIKGRPLRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFG 123
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 202
NILSCK+ D +G SKG+GFV FE E+A+ AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 124 NILSCKVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Query: 203 --AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
A +F NV++KN E DE LK++F +YG S VM D GKSK FGFV+FE +
Sbjct: 183 LGARAREFTNVYIKNFGEDMDDEKLKELFSKYGPALSIRVMTDDGGKSKGFGFVSFERHE 242
Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
DA KAV+ +NGK+ + R+ YVG+AQKK ER+ ELK +FEQ ++ + ++QG+NLY+KNL
Sbjct: 243 DAQKAVDDMNGKELNGRQVYVGRAQKKGERQNELKRKFEQMKQDRMTRYQGVNLYVKNLD 302
Query: 321 DSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSK 380
D +DDE+L++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +K
Sbjct: 303 DGLDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATK 361
Query: 381 PLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSG 426
PLYVA+AQRKEER+A L Q+ Q P P P PSG
Sbjct: 362 PLYVALAQRKEERQAHLTNQYMQRMATVRAVPNPVLNPYQPAPPSG 407
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 184/589 (31%), Positives = 292/589 (49%), Gaps = 97/589 (16%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ +LD ++ + LYD FS G +LS +V D + S GYG+V++ A RA++
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETHEAAERAIEK 157
Query: 91 LNFTPLNNKSIRI----MYSHRDPSI--RKSGTGNIFIKNLDKSIDHKALHDTFSSFGNI 144
+N LN++ + + R+ + R N++IKN + +D + L + FS +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGARAREFTNVYIKNFGEDMDDEKLKELFSKYGPA 217
Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAI 204
LS ++ TD G+SKGFGFV FE E AQ A+D +NG +N +QV+VG +K ER+ +
Sbjct: 218 LSIRVMTDDGGKSKGFGFVSFERHEDAQKAVDDMNGKELNGRQVYVGRAQKKGERQN-EL 276
Query: 205 KTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCF 251
K KF N++VKNLD+ DE L+K F +GTITSA VM +G G+SK F
Sbjct: 277 KRKFEQMKQDRMTRYQGVNLYVKNLDDGLDDERLRKEFSPFGTITSAKVMMEG-GRSKGF 335
Query: 252 GFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQG 311
GFV F + ++A KAV +NG+ + YV AQ+K ER+ L
Sbjct: 336 GFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHL----------------- 378
Query: 312 LNLYIKNLGDSIDDEKLKELFSEFGTITSC-KVMRDPSGISKGSGFVAFSTPEEASRALA 370
N Y++ + T+ + + +P + SG+ + P+ +RA
Sbjct: 379 TNQYMQRMA----------------TVRAVPNPVLNPYQPAPPSGYFMAAIPQTQNRAAY 422
Query: 371 EMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQ 430
++ +P Q ++ Q Q P AM PS P + P+ G
Sbjct: 423 YSANQLAQLRPSPRWTTQG-------VRPQHFQNMPGAMRPSAPRPQALNAIRPTAAGN- 474
Query: 431 FLYGQAPPAIIPPQMPPRGHAYRY---------PLGRNMQDFPFDMGA-------GSMLP 474
Q P + +MP + R P+ R M + + G S
Sbjct: 475 ---AQVPRMMASQRMPAQTLGQRAAGASTTAAAPV-RTMPQYKYAAGVRNPQQHMASQPQ 530
Query: 475 VPVDMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKV 534
VP+ A + V P+TA + LA+A P++Q+ +LGE L+PL++ + A K+
Sbjct: 531 VPMQQPAVL------VQGQEPLTA--SMLASAPPQEQKQMLGERLFPLIQDVHPSLAGKI 582
Query: 535 TGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRS----VAQQQANNPA 579
TGMLLE+D +E+LH+LESPE+L++K+ EA+ VL++ A Q++ PA
Sbjct: 583 TGMLLEIDNSELLHMLESPESLRSKMDEAVAVLQAHQAKEAAQKSTTPA 631
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 105/298 (35%), Positives = 172/298 (57%), Gaps = 16/298 (5%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFEN 167
+PS ++++ +L + L++ FS G ILS ++ D + +S G+ +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
A+ A+D +N +I + + + +R+ K+ N+F+KNLD+S ++ L
Sbjct: 62 PADAERALDTMNFDVIKGRPLRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYD 117
Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
F +G I S V+ D +G SK +GFV+FE + A +A+E +NG +DR+ +VG+ + +
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
ERE EL + + N+YIKN G+ +DDEKLKELFS++G S +VM D
Sbjct: 177 KEREAELGARAREF----------TNVYIKNFGEDMDDEKLKELFSKYGPALSIRVMTDD 226
Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
G SKG GFV+F E+A +A+ +MNGK + + +YV AQ+K ER+ L+ +F QM+
Sbjct: 227 GGKSKGFGFVSFERHEDAQKAVDDMNGKELNGRQVYVGRAQKKGERQNELKRKFEQMK 284
>gi|403292062|ref|XP_003937076.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Saimiri
boliviensis boliviensis]
Length = 630
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 236/425 (55%), Positives = 307/425 (72%), Gaps = 26/425 (6%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+ + + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G SKG+ FV FE +E+A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 202 -VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ K K F NV++KN E DE LK++F ++G S VMRD +GKSK FGFV++E
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAVE +NGK+ + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL
Sbjct: 242 EDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ S
Sbjct: 302 DDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 380 KPLYVAVAQRKEERRARLQAQF----------------SQMRPVAMG---PSVPP---RM 417
KPLYVA+AQRKEER+A L Q+ +Q +P A G P+VP R
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP 420
Query: 418 PMYPP 422
P Y P
Sbjct: 421 PYYTP 425
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 60/75 (80%), Gaps = 2/75 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A P++Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 539 PLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPE 596
Query: 555 ALKAKVAEAMEVLRS 569
+L++KV EA+ VL++
Sbjct: 597 SLRSKVDEAVAVLQA 611
>gi|291408594|ref|XP_002720593.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1
[Oryctolagus cuniculus]
Length = 636
Score = 467 bits (1201), Expect = e-128, Method: Compositional matrix adjust.
Identities = 228/406 (56%), Positives = 297/406 (73%), Gaps = 4/406 (0%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
S + SLYVGDL +VT++ LY+ FS G +LS+RVCRD+ TRRSLGY YVN+ PA
Sbjct: 4 SAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPA 63
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
DA RALD +NF + K +RIM+S RDPS+ KSG GNIFIKNLDKSID+KAL+DTFS+FG
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWSQRDPSLHKSGVGNIFIKNLDKSIDNKALYDTFSAFG 123
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 202
NILSCK+ D +G SKG+GFV FE +E+A+ AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 124 NILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Query: 203 --AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
A +F NV++KN E DE LK +FG++G S VM D GKSK FGFV+FE +
Sbjct: 183 LGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHE 242
Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
DA KAV+ +NGK+ + ++ YVG+AQKK ER+ ELK +FEQ ++ + ++QG+NLY+KNL
Sbjct: 243 DAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLD 302
Query: 321 DSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSK 380
D IDDE+L++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +K
Sbjct: 303 DGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATK 361
Query: 381 PLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSG 426
PLYVA+AQRKEER+A L Q+ Q P P P PSG
Sbjct: 362 PLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSG 407
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 109/298 (36%), Positives = 173/298 (58%), Gaps = 16/298 (5%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFEN 167
+PS ++++ +L + L++ FS G ILS ++ D + +S G+ +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
A+ A+D +N +I K V + +R+ K+ N+F+KNLD+S ++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMW----SQRDPSLHKSGVGNIFIKNLDKSIDNKALYD 117
Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
F +G I S V+ D +G SK +GFV+FE + A +A+E +NG +DR+ +VG+ + +
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
ERE EL + ++ N+YIKN G+ +DDE+LK+LF +FG S KVM D
Sbjct: 177 KEREAELGARAKEFT----------NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE 226
Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
SG SKG GFV+F E+A +A+ EMNGK + K +YV AQ+K ER+ L+ +F QM+
Sbjct: 227 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 284
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA+A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 544 PLTA--SMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPE 601
Query: 555 ALKAKVAEAMEVLRSVAQQQA 575
+L++KV EA+ VL++ ++A
Sbjct: 602 SLRSKVDEAVAVLQAHQAKEA 622
>gi|149023878|gb|EDL80375.1| rCG31475, isoform CRA_a [Rattus norvegicus]
Length = 660
Score = 467 bits (1201), Expect = e-128, Method: Compositional matrix adjust.
Identities = 235/425 (55%), Positives = 307/425 (72%), Gaps = 26/425 (6%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+ + + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G SKG+ FV FE +E+A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAANKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 202 -VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ K K F NV++KN E DE+L+++F ++G S VMRD GKSK FGFV++E
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDENLRELFSQFGKTLSVKVMRDCSGKSKGFGFVSYEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAVE +NGK+ + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL
Sbjct: 242 EDANKAVEEMNGKEMSGKSIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ S
Sbjct: 302 DDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 380 KPLYVAVAQRKEERRARLQAQF----------------SQMRPVAMG---PSVPP---RM 417
KPLYVA+AQRKEER+A L Q+ +Q +P A G P+VP R
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP 420
Query: 418 PMYPP 422
P Y P
Sbjct: 421 PYYTP 425
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 60/75 (80%), Gaps = 2/75 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A P++Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 569 PLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPE 626
Query: 555 ALKAKVAEAMEVLRS 569
+L++KV EA+ VL++
Sbjct: 627 SLRSKVDEAVAVLQA 641
>gi|406602185|emb|CCH46236.1| Polyadenylate-binding protein, cytoplasmic and nuclear
[Wickerhamomyces ciferrii]
Length = 652
Score = 467 bits (1201), Expect = e-128, Method: Compositional matrix adjust.
Identities = 261/612 (42%), Positives = 377/612 (61%), Gaps = 72/612 (11%)
Query: 10 AQMSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRR 69
A S G A +S T SLYVG+L+ ++ ++ L+++FS +GQV S+RVCRD T+R
Sbjct: 40 ATESTAEGEQASSSSVSETTASLYVGELEPSINEALLFEIFSPIGQVSSIRVCRDALTKR 99
Query: 70 SLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSI 129
SLGY YVNY N D +A+D LN++ + + IRIM+S RDP+ R++G GN+FIKNL +I
Sbjct: 100 SLGYAYVNYHNVKDGEKAIDELNYSVVKGQPIRIMWSQRDPAKRRNGEGNVFIKNLHPAI 159
Query: 130 DHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVF 189
D+KALHDTFS+FG ILSCK+ATD GQSKGFGFV FE+ E+AQ AI+ +NGML+N+ +V+
Sbjct: 160 DNKALHDTFSAFGRILSCKVATDNFGQSKGFGFVHFESPEAAQAAIENVNGMLLNNNEVY 219
Query: 190 VGHFLRKQERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGK 247
VG + +++R++ + F NV+VKN+D ++E++K++F +GT+TS + +D +GK
Sbjct: 220 VGPHVARRDRQSKLEEVIKSFTNVYVKNIDLEASEEEVKELFTPFGTVTSFYLEKDAEGK 279
Query: 248 SKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVD 307
S+ F FVN+E + A K++E+LN + + ++ YVG+AQKKSER +ELK Q+E A E +
Sbjct: 280 SRGFAFVNYEEHEAAVKSIESLNDQDYKGKKLYVGRAQKKSERLEELKKQYEAARIEKLT 339
Query: 308 KFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASR 367
K QG+NL++KNL DSIDDEKLKE F FGTI+S KVM D SG SKG GFV+FS+PEEASR
Sbjct: 340 KSQGVNLFVKNLDDSIDDEKLKEEFQSFGTISSVKVMIDESGKSKGFGFVSFSSPEEASR 399
Query: 368 ALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFS-----QMRPVAMGPSVPPRMPMYPP 422
A++EMN M+ KPLYVA+AQRK+ RR++L+ Q +++ A +P + + P
Sbjct: 400 AISEMNQHMLAGKPLYVALAQRKDVRRSQLEQQIQARNQLRLQQAAAAGGLPGQ---FIP 456
Query: 423 GPSGLGQQFLYGQAP--------------PAIIP---PQMPPRGHAYRYPLGR------- 458
P F+YGQ P P +IP +PP+ ++ GR
Sbjct: 457 TP------FIYGQQPQFLPPGARGPLPNQPFLIPRPGQGLPPQAAGGQWVGGRPGQPAYG 510
Query: 459 ---NMQDFP---------------FDMGAGSMLP--VPVDMGAGIPRRDASVGQPMPITA 498
Q FP + G P P+D P G +
Sbjct: 511 LPQEFQQFPQGGRGGFRGGRGNGPRNQGGRGPAPNAAPID-----PNAQPGAGN---VAQ 562
Query: 499 LSTALANASPEQQRTLLGESLYPLV----EQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
L++ L N EQQ+ LLGE LY + + + ++A K+TGM+L+++ E+L LLE+ E
Sbjct: 563 LASILPNVPVEQQKRLLGEELYQRIVSTGKAQDPESAGKITGMMLDLENQEILSLLENEE 622
Query: 555 ALKAKVAEAMEV 566
K +A +
Sbjct: 623 LFKQHFDDAFQA 634
>gi|348552994|ref|XP_003462312.1| PREDICTED: polyadenylate-binding protein 4-like isoform 1 [Cavia
porcellus]
Length = 660
Score = 466 bits (1200), Expect = e-128, Method: Compositional matrix adjust.
Identities = 236/425 (55%), Positives = 308/425 (72%), Gaps = 26/425 (6%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+ + + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G SKG+ FV FE +E+A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 202 -VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ K K F NV++KN E DE+LK++F ++G S VMRD GKSK FGFV++E
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAVE +NGK+ + + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL
Sbjct: 242 EDANKAVEEMNGKEINGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ S
Sbjct: 302 DDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 380 KPLYVAVAQRKEERRARLQAQF----------------SQMRPVAMG---PSVPP---RM 417
KPLYVA+AQRKEER+A L Q+ +Q +P A G P+VP R
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP 420
Query: 418 PMYPP 422
P Y P
Sbjct: 421 PYYTP 425
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 60/75 (80%), Gaps = 2/75 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A P++Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 569 PLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPE 626
Query: 555 ALKAKVAEAMEVLRS 569
+L++KV EA+ VL++
Sbjct: 627 SLRSKVDEAVAVLQA 641
>gi|198386356|ref|NP_001094008.1| polyadenylate-binding protein 4 [Rattus norvegicus]
gi|183985833|gb|AAI66452.1| Pabpc4 protein [Rattus norvegicus]
Length = 644
Score = 466 bits (1200), Expect = e-128, Method: Compositional matrix adjust.
Identities = 235/425 (55%), Positives = 307/425 (72%), Gaps = 26/425 (6%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+ + + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G SKG+ FV FE +E+A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAANKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 202 -VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ K K F NV++KN E DE+L+++F ++G S VMRD GKSK FGFV++E
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDENLRELFSQFGKTLSVKVMRDCSGKSKGFGFVSYEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAVE +NGK+ + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL
Sbjct: 242 EDANKAVEEMNGKEMSGKSIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ S
Sbjct: 302 DDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 380 KPLYVAVAQRKEERRARLQAQF----------------SQMRPVAMG---PSVPP---RM 417
KPLYVA+AQRKEER+A L Q+ +Q +P A G P+VP R
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP 420
Query: 418 PMYPP 422
P Y P
Sbjct: 421 PYYTP 425
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 60/75 (80%), Gaps = 2/75 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A P++Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 553 PLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPE 610
Query: 555 ALKAKVAEAMEVLRS 569
+L++KV EA+ VL++
Sbjct: 611 SLRSKVDEAVAVLQA 625
>gi|426215226|ref|XP_004001875.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Ovis aries]
Length = 660
Score = 466 bits (1200), Expect = e-128, Method: Compositional matrix adjust.
Identities = 236/425 (55%), Positives = 307/425 (72%), Gaps = 26/425 (6%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+ + + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G SKG+ FV FE +E+A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 202 -VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ K K F NV++KN E DE+LK++F ++G S VMRD GKSK FGFV++E
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAVE +NGK+ + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL
Sbjct: 242 EDANKAVEEMNGKEITGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ S
Sbjct: 302 DDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 380 KPLYVAVAQRKEERRARLQAQF----------------SQMRPVAMG---PSVPP---RM 417
KPLYVA+AQRKEER+A L Q+ +Q +P A G P+VP R
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP 420
Query: 418 PMYPP 422
P Y P
Sbjct: 421 PYYTP 425
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 60/75 (80%), Gaps = 2/75 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A P++Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 569 PLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPE 626
Query: 555 ALKAKVAEAMEVLRS 569
+L++KV EA+ VL++
Sbjct: 627 SLRSKVDEAVAVLQA 641
>gi|350585908|ref|XP_003482078.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Sus scrofa]
Length = 660
Score = 466 bits (1200), Expect = e-128, Method: Compositional matrix adjust.
Identities = 236/425 (55%), Positives = 307/425 (72%), Gaps = 26/425 (6%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+ + + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G SKG+ FV FE +E+A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 202 -VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ K K F NV++KN E DE+LK++F ++G S VMRD GKSK FGFV++E
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAVE +NGK+ + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL
Sbjct: 242 EDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ S
Sbjct: 302 DDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 380 KPLYVAVAQRKEERRARLQAQF----------------SQMRPVAMG---PSVPP---RM 417
KPLYVA+AQRKEER+A L Q+ +Q +P A G P+VP R
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP 420
Query: 418 PMYPP 422
P Y P
Sbjct: 421 PYYTP 425
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 60/75 (80%), Gaps = 2/75 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A P++Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 569 PLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPE 626
Query: 555 ALKAKVAEAMEVLRS 569
+L++KV EA+ VL++
Sbjct: 627 SLRSKVDEAVAVLQA 641
>gi|417403696|gb|JAA48646.1| Putative polyadenylate-binding protein rrm superfamily [Desmodus
rotundus]
Length = 660
Score = 466 bits (1200), Expect = e-128, Method: Compositional matrix adjust.
Identities = 236/425 (55%), Positives = 307/425 (72%), Gaps = 26/425 (6%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+ + + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G SKG+ FV FE +E+A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 202 -VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ K K F NV++KN E DE LK++F ++G S VMRD +GKSK FGFV++E
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEMDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAVE +NGK+ + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL
Sbjct: 242 EDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ S
Sbjct: 302 DDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 380 KPLYVAVAQRKEERRARLQAQF----------------SQMRPVAMG---PSVPP---RM 417
KPLYVA+AQRKEER+A L Q+ +Q +P A G P+VP R
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP 420
Query: 418 PMYPP 422
P Y P
Sbjct: 421 PYYTP 425
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 60/75 (80%), Gaps = 2/75 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A P++Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 569 PLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPE 626
Query: 555 ALKAKVAEAMEVLRS 569
+L++KV EA+ VL++
Sbjct: 627 SLRSKVDEAVAVLQA 641
>gi|147899475|ref|NP_001085069.1| polyadenylate-binding protein 1-B [Xenopus laevis]
gi|82236793|sp|Q6IP09.1|PABPB_XENLA RecName: Full=Polyadenylate-binding protein 1-B; Short=PABP-1-B;
Short=Poly(A)-binding protein 1-B; Short=xPABP1-B;
AltName: Full=Cytoplasmic poly(A)-binding protein 1-B
gi|47940242|gb|AAH72110.1| MGC79060 protein [Xenopus laevis]
gi|80476254|gb|AAI08463.1| MGC79060 protein [Xenopus laevis]
Length = 633
Score = 466 bits (1200), Expect = e-128, Method: Compositional matrix adjust.
Identities = 243/488 (49%), Positives = 323/488 (66%), Gaps = 36/488 (7%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
S + SLYVGDL +VT++ LY+ FS G +LS+RVCRD+ TRRSLGY YVN+ PA
Sbjct: 4 SAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPA 63
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
DA RALD +NF + K +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FG
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFG 123
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 202
NILSCK+ D +G SKG+GFV FE +E+A+ AIDK+NGML+ND++VFVG F ++ERE
Sbjct: 124 NILSCKVVCDENG-SKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSRKEREAE 182
Query: 203 --AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
A +F NV++KN E DE LK+ FG+YG S VM D GKS+ FGFV+FE +
Sbjct: 183 LGARAKEFTNVYIKNFGEDMDDERLKEWFGQYGAALSVKVMTDDHGKSRGFGFVSFERHE 242
Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
DA KAV+ +NGK + + +VG+AQKK ER+ ELK +FEQ ++ + ++QG+NLY+KNL
Sbjct: 243 DAQKAVDDMNGKDLNGKAIFVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLD 302
Query: 321 DSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSK 380
D IDDE+L++ F+ FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +K
Sbjct: 303 DGIDDERLRKEFTPFGSITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATK 361
Query: 381 PLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAI 440
PLYVA+AQRKEER+A L Q+ Q P+ P + Y P PS + PPA
Sbjct: 362 PLYVALAQRKEERQAHLTNQYMQRMASVRVPN--PVINPYQPPPSS----YFMAAIPPA- 414
Query: 441 IPPQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALS 500
+ A YP G+ Q P PR A +P P ++
Sbjct: 415 -------QNRAAYYPPGQIAQLRP------------------SPRWTAQGARPHPFQNMA 449
Query: 501 TALANASP 508
A+ ++P
Sbjct: 450 GAIRPSAP 457
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 103/298 (34%), Positives = 171/298 (57%), Gaps = 16/298 (5%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFEN 167
+PS ++++ +L + L++ FS G ILS ++ D + +S G+ +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
A+ A+D +N +I K V + +R+ K+ N+F+KNLD+S ++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYD 117
Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
F +G I S V+ D +G SK +GFV+FE + A +A++ +NG +DR+ +VG+ + +
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSR 176
Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
ERE EL + ++ N+YIKN G+ +DDE+LKE F ++G S KVM D
Sbjct: 177 KEREAELGARAKEFT----------NVYIKNFGEDMDDERLKEWFGQYGAALSVKVMTDD 226
Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
G S+G GFV+F E+A +A+ +MNGK + K ++V AQ+K ER+ L+ +F QM+
Sbjct: 227 HGKSRGFGFVSFERHEDAQKAVDDMNGKDLNGKAIFVGRAQKKVERQTELKRKFEQMK 284
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 66/92 (71%), Gaps = 5/92 (5%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 542 PLTA--SMLAAAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPE 599
Query: 555 ALKAKVAEAMEVLRSVAQQQANNPADQLASLS 586
+L++KV EA+ VL++ QA A ++ S +
Sbjct: 600 SLRSKVDEAVAVLQA---HQAKEAAQKVVSAT 628
>gi|403292058|ref|XP_003937074.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 659
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 236/425 (55%), Positives = 307/425 (72%), Gaps = 26/425 (6%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+ + + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G SKG+ FV FE +E+A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 202 -VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ K K F NV++KN E DE LK++F ++G S VMRD +GKSK FGFV++E
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAVE +NGK+ + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL
Sbjct: 242 EDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ S
Sbjct: 302 DDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 380 KPLYVAVAQRKEERRARLQAQF----------------SQMRPVAMG---PSVPP---RM 417
KPLYVA+AQRKEER+A L Q+ +Q +P A G P+VP R
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP 420
Query: 418 PMYPP 422
P Y P
Sbjct: 421 PYYTP 425
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 60/75 (80%), Gaps = 2/75 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A P++Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 568 PLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPE 625
Query: 555 ALKAKVAEAMEVLRS 569
+L++KV EA+ VL++
Sbjct: 626 SLRSKVDEAVAVLQA 640
>gi|348552996|ref|XP_003462313.1| PREDICTED: polyadenylate-binding protein 4-like isoform 2 [Cavia
porcellus]
Length = 644
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 236/425 (55%), Positives = 308/425 (72%), Gaps = 26/425 (6%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+ + + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G SKG+ FV FE +E+A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 202 -VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ K K F NV++KN E DE+LK++F ++G S VMRD GKSK FGFV++E
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAVE +NGK+ + + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL
Sbjct: 242 EDANKAVEEMNGKEINGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ S
Sbjct: 302 DDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 380 KPLYVAVAQRKEERRARLQAQF----------------SQMRPVAMG---PSVPP---RM 417
KPLYVA+AQRKEER+A L Q+ +Q +P A G P+VP R
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP 420
Query: 418 PMYPP 422
P Y P
Sbjct: 421 PYYTP 425
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 60/75 (80%), Gaps = 2/75 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A P++Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 553 PLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPE 610
Query: 555 ALKAKVAEAMEVLRS 569
+L++KV EA+ VL++
Sbjct: 611 SLRSKVDEAVAVLQA 625
>gi|410263248|gb|JAA19590.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
gi|410263254|gb|JAA19593.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
Length = 660
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 236/425 (55%), Positives = 307/425 (72%), Gaps = 26/425 (6%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+ + + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G SKG+ FV FE +E+A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 202 -VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ K K F NV++KN E DE LK++F ++G S VMRD +GKSK FGFV++E
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAVE +NGK+ + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL
Sbjct: 242 EDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ S
Sbjct: 302 DDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 380 KPLYVAVAQRKEERRARLQAQF----------------SQMRPVAMG---PSVPP---RM 417
KPLYVA+AQRKEER+A L Q+ +Q +P A G P+VP R
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQREAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP 420
Query: 418 PMYPP 422
P Y P
Sbjct: 421 PYYTP 425
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 60/75 (80%), Gaps = 2/75 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A P++Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 569 PLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPE 626
Query: 555 ALKAKVAEAMEVLRS 569
+L++KV EA+ VL++
Sbjct: 627 SLRSKVDEAVAVLQA 641
>gi|335291035|ref|XP_003127861.2| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Sus scrofa]
Length = 644
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 236/425 (55%), Positives = 307/425 (72%), Gaps = 26/425 (6%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+ + + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G SKG+ FV FE +E+A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 202 -VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ K K F NV++KN E DE+LK++F ++G S VMRD GKSK FGFV++E
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAVE +NGK+ + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL
Sbjct: 242 EDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ S
Sbjct: 302 DDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 380 KPLYVAVAQRKEERRARLQAQF----------------SQMRPVAMG---PSVPP---RM 417
KPLYVA+AQRKEER+A L Q+ +Q +P A G P+VP R
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP 420
Query: 418 PMYPP 422
P Y P
Sbjct: 421 PYYTP 425
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 60/75 (80%), Gaps = 2/75 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A P++Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 553 PLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPE 610
Query: 555 ALKAKVAEAMEVLRS 569
+L++KV EA+ VL++
Sbjct: 611 SLRSKVDEAVAVLQA 625
>gi|48734702|gb|AAH71591.1| PABPC4 protein [Homo sapiens]
Length = 660
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 236/425 (55%), Positives = 307/425 (72%), Gaps = 26/425 (6%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+ + + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G SKG+ FV FE +E+A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 202 -VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ K K F NV++KN E DE LK++F ++G S VMRD +GKSK FGFV++E
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAVE +NGK+ + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL
Sbjct: 242 EDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ S
Sbjct: 302 DDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 380 KPLYVAVAQRKEERRARLQAQF----------------SQMRPVAMG---PSVPP---RM 417
KPLYVA+AQRKEER+A L Q+ +Q +P A G P+VP R
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP 420
Query: 418 PMYPP 422
P Y P
Sbjct: 421 PYYTP 425
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 60/75 (80%), Gaps = 2/75 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A P++Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 569 PLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPE 626
Query: 555 ALKAKVAEAMEVLRS 569
+L++KV EA+ VL++
Sbjct: 627 SLRSKVDEAVAVLQA 641
>gi|149023879|gb|EDL80376.1| rCG31475, isoform CRA_b [Rattus norvegicus]
Length = 656
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 235/425 (55%), Positives = 307/425 (72%), Gaps = 26/425 (6%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+ + + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G SKG+ FV FE +E+A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAANKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 202 -VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ K K F NV++KN E DE+L+++F ++G S VMRD GKSK FGFV++E
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDENLRELFSQFGKTLSVKVMRDCSGKSKGFGFVSYEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAVE +NGK+ + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL
Sbjct: 242 EDANKAVEEMNGKEMSGKSIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ S
Sbjct: 302 DDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 380 KPLYVAVAQRKEERRARLQAQF----------------SQMRPVAMG---PSVPP---RM 417
KPLYVA+AQRKEER+A L Q+ +Q +P A G P+VP R
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP 420
Query: 418 PMYPP 422
P Y P
Sbjct: 421 PYYTP 425
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 60/75 (80%), Gaps = 2/75 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A P++Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 569 PLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPE 626
Query: 555 ALKAKVAEAMEVLRS 569
+L++KV EA+ VL++
Sbjct: 627 SLRSKVDEAVAVLQA 641
>gi|410966842|ref|XP_003989936.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Felis catus]
Length = 644
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 236/425 (55%), Positives = 306/425 (72%), Gaps = 26/425 (6%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+ + + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G SKG+ FV FE +E+A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 202 -VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ K K F NV++KN E DE LK++F ++G S VMRD GKSK FGFV++E
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAVE +NGK+ + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL
Sbjct: 242 EDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ S
Sbjct: 302 DDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 380 KPLYVAVAQRKEERRARLQAQF----------------SQMRPVAMG---PSVPP---RM 417
KPLYVA+AQRKEER+A L Q+ +Q +P A G P+VP R
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP 420
Query: 418 PMYPP 422
P Y P
Sbjct: 421 PYYTP 425
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 60/75 (80%), Gaps = 2/75 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A P++Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 553 PLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPE 610
Query: 555 ALKAKVAEAMEVLRS 569
+L++KV EA+ VL++
Sbjct: 611 SLRSKVDEAVAVLQA 625
>gi|119627673|gb|EAX07268.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_h [Homo sapiens]
Length = 661
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 236/425 (55%), Positives = 307/425 (72%), Gaps = 26/425 (6%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+ + + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G SKG+ FV FE +E+A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 202 -VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ K K F NV++KN E DE LK++F ++G S VMRD +GKSK FGFV++E
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAVE +NGK+ + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL
Sbjct: 242 EDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ S
Sbjct: 302 DDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 380 KPLYVAVAQRKEERRARLQAQF----------------SQMRPVAMG---PSVPP---RM 417
KPLYVA+AQRKEER+A L Q+ +Q +P A G P+VP R
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP 420
Query: 418 PMYPP 422
P Y P
Sbjct: 421 PYYTP 425
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 60/75 (80%), Gaps = 2/75 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A P++Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 570 PLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPE 627
Query: 555 ALKAKVAEAMEVLRS 569
+L++KV EA+ VL++
Sbjct: 628 SLRSKVDEAVAVLQA 642
>gi|208431833|ref|NP_001129125.1| polyadenylate-binding protein 4 isoform 1 [Homo sapiens]
gi|332808508|ref|XP_513344.3| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Pan
troglodytes]
gi|395730714|ref|XP_002811047.2| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Pongo abelii]
gi|397488842|ref|XP_003815452.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Pan paniscus]
gi|426329062|ref|XP_004025563.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Gorilla
gorilla gorilla]
gi|66267552|gb|AAH94755.1| PABPC4 protein [Homo sapiens]
gi|119627668|gb|EAX07263.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_c [Homo sapiens]
gi|410227598|gb|JAA11018.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
gi|410227604|gb|JAA11021.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
Length = 660
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 236/425 (55%), Positives = 307/425 (72%), Gaps = 26/425 (6%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+ + + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G SKG+ FV FE +E+A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 202 -VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ K K F NV++KN E DE LK++F ++G S VMRD +GKSK FGFV++E
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAVE +NGK+ + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL
Sbjct: 242 EDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ S
Sbjct: 302 DDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 380 KPLYVAVAQRKEERRARLQAQF----------------SQMRPVAMG---PSVPP---RM 417
KPLYVA+AQRKEER+A L Q+ +Q +P A G P+VP R
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP 420
Query: 418 PMYPP 422
P Y P
Sbjct: 421 PYYTP 425
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 60/75 (80%), Gaps = 2/75 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A P++Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 569 PLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPE 626
Query: 555 ALKAKVAEAMEVLRS 569
+L++KV EA+ VL++
Sbjct: 627 SLRSKVDEAVAVLQA 641
>gi|344287653|ref|XP_003415567.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Loxodonta
africana]
Length = 660
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 236/425 (55%), Positives = 306/425 (72%), Gaps = 26/425 (6%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+ + + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G SKG+ FV FE +E+A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 202 -VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ K K F NV++KN E DE LK++F ++G S VMRD GKSK FGFV++E
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAVE +NGK+ + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL
Sbjct: 242 EDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ S
Sbjct: 302 DDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 380 KPLYVAVAQRKEERRARLQAQF----------------SQMRPVAMG---PSVPP---RM 417
KPLYVA+AQRKEER+A L Q+ +Q +P A G P+VP R
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP 420
Query: 418 PMYPP 422
P Y P
Sbjct: 421 PYYTP 425
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 60/75 (80%), Gaps = 2/75 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A P++Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 569 PLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPE 626
Query: 555 ALKAKVAEAMEVLRS 569
+L++KV EA+ VL++
Sbjct: 627 SLRSKVDEAVAVLQA 641
>gi|410263250|gb|JAA19591.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
Length = 644
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 236/425 (55%), Positives = 307/425 (72%), Gaps = 26/425 (6%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+ + + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G SKG+ FV FE +E+A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 202 -VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ K K F NV++KN E DE LK++F ++G S VMRD +GKSK FGFV++E
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAVE +NGK+ + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL
Sbjct: 242 EDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ S
Sbjct: 302 DDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 380 KPLYVAVAQRKEERRARLQAQF----------------SQMRPVAMG---PSVPP---RM 417
KPLYVA+AQRKEER+A L Q+ +Q +P A G P+VP R
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQREAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP 420
Query: 418 PMYPP 422
P Y P
Sbjct: 421 PYYTP 425
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 60/75 (80%), Gaps = 2/75 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A P++Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 553 PLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPE 610
Query: 555 ALKAKVAEAMEVLRS 569
+L++KV EA+ VL++
Sbjct: 611 SLRSKVDEAVAVLQA 625
>gi|403292060|ref|XP_003937075.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 643
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 236/425 (55%), Positives = 307/425 (72%), Gaps = 26/425 (6%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+ + + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G SKG+ FV FE +E+A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 202 -VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ K K F NV++KN E DE LK++F ++G S VMRD +GKSK FGFV++E
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAVE +NGK+ + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL
Sbjct: 242 EDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ S
Sbjct: 302 DDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 380 KPLYVAVAQRKEERRARLQAQF----------------SQMRPVAMG---PSVPP---RM 417
KPLYVA+AQRKEER+A L Q+ +Q +P A G P+VP R
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP 420
Query: 418 PMYPP 422
P Y P
Sbjct: 421 PYYTP 425
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 60/75 (80%), Gaps = 2/75 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A P++Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 552 PLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPE 609
Query: 555 ALKAKVAEAMEVLRS 569
+L++KV EA+ VL++
Sbjct: 610 SLRSKVDEAVAVLQA 624
>gi|73976763|ref|XP_857000.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Canis lupus
familiaris]
Length = 644
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 236/425 (55%), Positives = 306/425 (72%), Gaps = 26/425 (6%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+ + + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G SKG+ FV FE +E+A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 202 -VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ K K F NV++KN E DE LK++F ++G S VMRD GKSK FGFV++E
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAVE +NGK+ + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL
Sbjct: 242 EDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ S
Sbjct: 302 DDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 380 KPLYVAVAQRKEERRARLQAQF----------------SQMRPVAMG---PSVPP---RM 417
KPLYVA+AQRKEER+A L Q+ +Q +P A G P+VP R
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP 420
Query: 418 PMYPP 422
P Y P
Sbjct: 421 PYYTP 425
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 60/75 (80%), Gaps = 2/75 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A P++Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 553 PLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPE 610
Query: 555 ALKAKVAEAMEVLRS 569
+L++KV EA+ VL++
Sbjct: 611 SLRSKVDEAVAVLQA 625
>gi|344287651|ref|XP_003415566.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Loxodonta
africana]
Length = 644
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 236/425 (55%), Positives = 306/425 (72%), Gaps = 26/425 (6%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+ + + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G SKG+ FV FE +E+A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 202 -VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ K K F NV++KN E DE LK++F ++G S VMRD GKSK FGFV++E
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAVE +NGK+ + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL
Sbjct: 242 EDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ S
Sbjct: 302 DDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 380 KPLYVAVAQRKEERRARLQAQF----------------SQMRPVAMG---PSVPP---RM 417
KPLYVA+AQRKEER+A L Q+ +Q +P A G P+VP R
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP 420
Query: 418 PMYPP 422
P Y P
Sbjct: 421 PYYTP 425
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 60/75 (80%), Gaps = 2/75 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A P++Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 553 PLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPE 610
Query: 555 ALKAKVAEAMEVLRS 569
+L++KV EA+ VL++
Sbjct: 611 SLRSKVDEAVAVLQA 625
>gi|139948570|ref|NP_001077193.1| polyadenylate-binding protein 4 [Bos taurus]
gi|134024563|gb|AAI34510.1| PABPC4 protein [Bos taurus]
gi|296488909|tpg|DAA31022.1| TPA: poly A binding protein, cytoplasmic 4 [Bos taurus]
Length = 645
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 236/425 (55%), Positives = 307/425 (72%), Gaps = 26/425 (6%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+ + + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G SKG+ FV FE +E+A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 202 -VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ K K F NV++KN E DE+LK++F ++G S VMRD GKSK FGFV++E
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAVE +NGK+ + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL
Sbjct: 242 EDANKAVEEMNGKEITGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ S
Sbjct: 302 DDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 380 KPLYVAVAQRKEERRARLQAQF----------------SQMRPVAMG---PSVPP---RM 417
KPLYVA+AQRKEER+A L Q+ +Q +P A G P+VP R
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP 420
Query: 418 PMYPP 422
P Y P
Sbjct: 421 PYYTP 425
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 60/75 (80%), Gaps = 2/75 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A P++Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 554 PLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPE 611
Query: 555 ALKAKVAEAMEVLRS 569
+L++KV EA+ VL++
Sbjct: 612 SLRSKVDEAVAVLQA 626
>gi|149693775|ref|XP_001503500.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Equus
caballus]
Length = 644
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 236/425 (55%), Positives = 306/425 (72%), Gaps = 26/425 (6%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+ + + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G SKG+ FV FE +E+A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 202 -VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ K K F NV++KN E DE LK++F ++G S VMRD GKSK FGFV++E
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAVE +NGK+ + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL
Sbjct: 242 EDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ S
Sbjct: 302 DDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 380 KPLYVAVAQRKEERRARLQAQF----------------SQMRPVAMG---PSVPP---RM 417
KPLYVA+AQRKEER+A L Q+ +Q +P A G P+VP R
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP 420
Query: 418 PMYPP 422
P Y P
Sbjct: 421 PYYTP 425
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 60/75 (80%), Gaps = 2/75 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A P++Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 553 PLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPE 610
Query: 555 ALKAKVAEAMEVLRS 569
+L++KV EA+ VL++
Sbjct: 611 SLRSKVDEAVAVLQA 625
>gi|410966840|ref|XP_003989935.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Felis catus]
Length = 660
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 236/425 (55%), Positives = 306/425 (72%), Gaps = 26/425 (6%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+ + + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G SKG+ FV FE +E+A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 202 -VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ K K F NV++KN E DE LK++F ++G S VMRD GKSK FGFV++E
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAVE +NGK+ + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL
Sbjct: 242 EDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ S
Sbjct: 302 DDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 380 KPLYVAVAQRKEERRARLQAQF----------------SQMRPVAMG---PSVPP---RM 417
KPLYVA+AQRKEER+A L Q+ +Q +P A G P+VP R
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP 420
Query: 418 PMYPP 422
P Y P
Sbjct: 421 PYYTP 425
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 60/75 (80%), Gaps = 2/75 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A P++Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 569 PLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPE 626
Query: 555 ALKAKVAEAMEVLRS 569
+L++KV EA+ VL++
Sbjct: 627 SLRSKVDEAVAVLQA 641
>gi|4504715|ref|NP_003810.1| polyadenylate-binding protein 4 isoform 2 [Homo sapiens]
gi|332808510|ref|XP_003308042.1| PREDICTED: polyadenylate-binding protein 4 [Pan troglodytes]
gi|395730716|ref|XP_003775777.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Pongo abelii]
gi|397488844|ref|XP_003815453.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Pan paniscus]
gi|426329066|ref|XP_004025565.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Gorilla
gorilla gorilla]
gi|12229875|sp|Q13310.1|PABP4_HUMAN RecName: Full=Polyadenylate-binding protein 4; Short=PABP-4;
Short=Poly(A)-binding protein 4; AltName:
Full=Activated-platelet protein 1; Short=APP-1; AltName:
Full=Inducible poly(A)-binding protein; Short=iPABP
gi|1163177|gb|AAC50350.1| inducible poly(A)-binding protein [Homo sapiens]
gi|2801403|gb|AAB97309.1| polyadenylate binding protein [Homo sapiens]
gi|119627669|gb|EAX07264.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_d [Homo sapiens]
gi|410227600|gb|JAA11019.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
gi|1585757|prf||2201474A inducible poly(A)-binding protein
Length = 644
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 236/425 (55%), Positives = 307/425 (72%), Gaps = 26/425 (6%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+ + + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G SKG+ FV FE +E+A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 202 -VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ K K F NV++KN E DE LK++F ++G S VMRD +GKSK FGFV++E
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAVE +NGK+ + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL
Sbjct: 242 EDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ S
Sbjct: 302 DDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 380 KPLYVAVAQRKEERRARLQAQF----------------SQMRPVAMG---PSVPP---RM 417
KPLYVA+AQRKEER+A L Q+ +Q +P A G P+VP R
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP 420
Query: 418 PMYPP 422
P Y P
Sbjct: 421 PYYTP 425
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 60/75 (80%), Gaps = 2/75 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A P++Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 553 PLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPE 610
Query: 555 ALKAKVAEAMEVLRS 569
+L++KV EA+ VL++
Sbjct: 611 SLRSKVDEAVAVLQA 625
>gi|426215228|ref|XP_004001876.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Ovis aries]
Length = 644
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 236/425 (55%), Positives = 307/425 (72%), Gaps = 26/425 (6%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+ + + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G SKG+ FV FE +E+A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 202 -VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ K K F NV++KN E DE+LK++F ++G S VMRD GKSK FGFV++E
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAVE +NGK+ + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL
Sbjct: 242 EDANKAVEEMNGKEITGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ S
Sbjct: 302 DDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 380 KPLYVAVAQRKEERRARLQAQF----------------SQMRPVAMG---PSVPP---RM 417
KPLYVA+AQRKEER+A L Q+ +Q +P A G P+VP R
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP 420
Query: 418 PMYPP 422
P Y P
Sbjct: 421 PYYTP 425
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 60/75 (80%), Gaps = 2/75 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A P++Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 553 PLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPE 610
Query: 555 ALKAKVAEAMEVLRS 569
+L++KV EA+ VL++
Sbjct: 611 SLRSKVDEAVAVLQA 625
>gi|417403591|gb|JAA48595.1| Putative polyadenylate-binding protein rrm superfamily [Desmodus
rotundus]
Length = 644
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 236/425 (55%), Positives = 307/425 (72%), Gaps = 26/425 (6%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+ + + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G SKG+ FV FE +E+A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 202 -VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ K K F NV++KN E DE LK++F ++G S VMRD +GKSK FGFV++E
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEMDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAVE +NGK+ + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL
Sbjct: 242 EDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ S
Sbjct: 302 DDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 380 KPLYVAVAQRKEERRARLQAQF----------------SQMRPVAMG---PSVPP---RM 417
KPLYVA+AQRKEER+A L Q+ +Q +P A G P+VP R
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP 420
Query: 418 PMYPP 422
P Y P
Sbjct: 421 PYYTP 425
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 60/75 (80%), Gaps = 2/75 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A P++Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 553 PLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPE 610
Query: 555 ALKAKVAEAMEVLRS 569
+L++KV EA+ VL++
Sbjct: 611 SLRSKVDEAVAVLQA 625
>gi|395853070|ref|XP_003799043.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Otolemur
garnettii]
Length = 646
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 236/425 (55%), Positives = 306/425 (72%), Gaps = 26/425 (6%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+ + + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G SKG+ FV FE +E+A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 202 -VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ K K F NV++KN E DE LK++F ++G S VMRD GKSK FGFV++E
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAVE +NGK+ + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL
Sbjct: 242 EDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ S
Sbjct: 302 DDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 380 KPLYVAVAQRKEERRARLQAQF----------------SQMRPVAMG---PSVPP---RM 417
KPLYVA+AQRKEER+A L Q+ +Q +P A G P+VP R
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP 420
Query: 418 PMYPP 422
P Y P
Sbjct: 421 PYYTP 425
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 60/75 (80%), Gaps = 2/75 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A P++Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 555 PLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPE 612
Query: 555 ALKAKVAEAMEVLRS 569
+L++KV EA+ VL++
Sbjct: 613 SLRSKVDEAVAVLQA 627
>gi|91094515|ref|XP_971941.1| PREDICTED: similar to poly A binding protein [Tribolium castaneum]
gi|270000753|gb|EEZ97200.1| hypothetical protein TcasGA2_TC004389 [Tribolium castaneum]
Length = 565
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 263/564 (46%), Positives = 359/564 (63%), Gaps = 31/564 (5%)
Query: 24 GNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPAD 83
G F TSLYVGDL +VT++ LY+ FS GQ+LS+RVCRD T++SLGY YVN++ +
Sbjct: 6 GILFPLTSLYVGDLHPDVTEALLYEKFSPAGQILSLRVCRDSRTKQSLGYAYVNFSQTIE 65
Query: 84 AARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGN 143
A R LD +NF L K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KA++DTFS+FGN
Sbjct: 66 AERVLDTMNFDLLKGKPIRIMWSQRDPSLRKSGIGNVFIKNLDKSIDNKAMYDTFSAFGN 125
Query: 144 ILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET-V 202
ILSCK+A D G SKG+GFV FE+ E+A AI+K+NGML+N K+V+VG F+ + ERE +
Sbjct: 126 ILSCKVAIDDDGVSKGYGFVHFESIEAANKAIEKVNGMLLNGKKVYVGKFIPRAEREKEI 185
Query: 203 AIKT-KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADD 261
K+ K+ NV+VKN + T E L +F YGTITS VVM + DG SK FGF+ FE +
Sbjct: 186 GEKSKKYTNVYVKNFGRNLTQEQLYDLFKNYGTITSCVVMANPDGTSKGFGFIAFEEPES 245
Query: 262 AAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGD 321
A KAV +N + + YVG+AQKKSER +ELK +EQ E ++ QG N+YIKNL D
Sbjct: 246 AEKAVTEMNNYELNGTNLYVGRAQKKSERIKELKKCYEQMKLERYNRIQGANVYIKNLDD 305
Query: 322 SIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKP 381
+ D+++L++ FS+FG ITS KVM + G SKG GFV FSTPEEAS+A+ EM+G+MI SKP
Sbjct: 306 TFDNDRLRKEFSQFGAITSAKVMTE-GGRSKGFGFVCFSTPEEASKAITEMDGRMIGSKP 364
Query: 382 LYVAVAQRKEERRARLQAQFSQ-MRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAI 440
+YVA+AQR E+RRA L AQ Q +R M P + + P P + P
Sbjct: 365 IYVALAQRYEDRRAYLSAQCMQRIRHQTMSPPLTTPQFLIPTLPRFYNH--MAQIRPTPR 422
Query: 441 IPPQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALS 500
Q+P Y PL + P+ + S V ++ A GQ +PI +
Sbjct: 423 WTAQVPRLNGTYNMPL---LPATPYR--STSRPQVQINRSA-----RPITGQQVPIARPN 472
Query: 501 TALANASPEQQ---------------RTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTE 545
+ ++P + + +LGE +Y ++E+ + A K+TGMLLE+D +E
Sbjct: 473 SKYTASAPPRGVSVGVGNGGDPGADDKRMLGERMYRVIEKTYPEIAGKITGMLLEIDISE 532
Query: 546 VLHLLESPEALKAKVAEAMEVLRS 569
+ L+ + +LKAKV EA+ VL++
Sbjct: 533 LKALVNNEGSLKAKVEEAVAVLQA 556
>gi|395853068|ref|XP_003799042.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Otolemur
garnettii]
Length = 662
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 236/425 (55%), Positives = 306/425 (72%), Gaps = 26/425 (6%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+ + + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G SKG+ FV FE +E+A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 202 -VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ K K F NV++KN E DE LK++F ++G S VMRD GKSK FGFV++E
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAVE +NGK+ + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL
Sbjct: 242 EDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ S
Sbjct: 302 DDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 380 KPLYVAVAQRKEERRARLQAQF----------------SQMRPVAMG---PSVPP---RM 417
KPLYVA+AQRKEER+A L Q+ +Q +P A G P+VP R
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP 420
Query: 418 PMYPP 422
P Y P
Sbjct: 421 PYYTP 425
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 60/75 (80%), Gaps = 2/75 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A P++Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 571 PLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPE 628
Query: 555 ALKAKVAEAMEVLRS 569
+L++KV EA+ VL++
Sbjct: 629 SLRSKVDEAVAVLQA 643
>gi|351713677|gb|EHB16596.1| Polyadenylate-binding protein 4 [Heterocephalus glaber]
Length = 661
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 236/425 (55%), Positives = 306/425 (72%), Gaps = 26/425 (6%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+ + + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G SKG+ FV FE +E+A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 202 -VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ K K F NV++KN E DE LK++F ++G S VMRD GKSK FGFV++E
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAVE +NGK+ + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL
Sbjct: 242 EDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ S
Sbjct: 302 DDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 380 KPLYVAVAQRKEERRARLQAQF----------------SQMRPVAMG---PSVPP---RM 417
KPLYVA+AQRKEER+A L Q+ +Q +P A G P+VP R
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP 420
Query: 418 PMYPP 422
P Y P
Sbjct: 421 PYYTP 425
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 60/75 (80%), Gaps = 2/75 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A P++Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 570 PLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPE 627
Query: 555 ALKAKVAEAMEVLRS 569
+L++KV EA+ VL++
Sbjct: 628 SLRSKVDEAVAVLQA 642
>gi|338721949|ref|XP_003364451.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Equus
caballus]
Length = 660
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 236/425 (55%), Positives = 306/425 (72%), Gaps = 26/425 (6%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+ + + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G SKG+ FV FE +E+A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 202 -VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ K K F NV++KN E DE LK++F ++G S VMRD GKSK FGFV++E
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAVE +NGK+ + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL
Sbjct: 242 EDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ S
Sbjct: 302 DDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 380 KPLYVAVAQRKEERRARLQAQF----------------SQMRPVAMG---PSVPP---RM 417
KPLYVA+AQRKEER+A L Q+ +Q +P A G P+VP R
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP 420
Query: 418 PMYPP 422
P Y P
Sbjct: 421 PYYTP 425
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 60/75 (80%), Gaps = 2/75 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A P++Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 569 PLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPE 626
Query: 555 ALKAKVAEAMEVLRS 569
+L++KV EA+ VL++
Sbjct: 627 SLRSKVDEAVAVLQA 641
>gi|390597906|gb|EIN07305.1| polyadenylate binding protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 668
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 234/468 (50%), Positives = 325/468 (69%), Gaps = 31/468 (6%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVG+LD V+++ L+++F+ +G V S+RVCRD TRRSLGY YVNY N AD RAL
Sbjct: 51 SASLYVGELDPTVSEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYFNAADGERAL 110
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LN++ + ++ RIM+S RDP++RK+G GNIFIKNLD +ID+KALHDTF++FGN+LSCK
Sbjct: 111 EQLNYSLIKGRACRIMWSQRDPALRKTGQGNIFIKNLDDAIDNKALHDTFAAFGNVLSCK 170
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKT 206
+ATD G+SKG+GFV +E E+A++AI +NGML+NDK+V+VGH + K++R+ K
Sbjct: 171 VATDEMGRSKGYGFVHYETNEAAESAIKAVNGMLLNDKKVYVGHHVSKKDRQAKLDEQKK 230
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
+F NV+VKN+D D++ +++F +G +TSAV+ RD +G+S+ FGFVNFE ++A KAV
Sbjct: 231 QFTNVYVKNIDPEANDDEFRELFTPFGNVTSAVLQRDEEGRSRGFGFVNFETHEEAQKAV 290
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
+ L+ F R+ +V +AQKKSERE+EL+ +EQA E + K+QG+NLYIKNL D +DDE
Sbjct: 291 DTLHDSDFKGRKLFVSRAQKKSEREEELRRSYEQAKMEKMSKYQGVNLYIKNLEDDVDDE 350
Query: 327 KLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 386
KL++ F FG ITS KVMR G SKG GFV FS+P+EA++A+AEMN KM+ SKPLYV++
Sbjct: 351 KLRDAFEPFGAITSAKVMRTEGGTSKGFGFVCFSSPDEATKAVAEMNNKMMGSKPLYVSL 410
Query: 387 AQRKEERRARLQAQFSQMRPVAMGPSVPPRMP---MYPP-------GPSGLGQQFLYGQA 436
AQR+E RR +L++Q +Q + M + MP M PP P G+ F YGQ
Sbjct: 411 AQRREVRRQQLESQIAQRNQIRMQQAAAAGMPAGYMNPPMYYPGPGFPPPAGRGFGYGQ- 469
Query: 437 PPAIIPPQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIP 484
P MPPR RY G+ + +PVP G G+P
Sbjct: 470 -----PGMMPPRP---RYAPGQQVPG----------MPVPAPYGYGVP 499
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 58/81 (71%)
Query: 499 LSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKA 558
+S+ LANASP +Q+ ++GE LY + + D A K+TGMLLEM+ E++HLL++ +AL++
Sbjct: 586 ISSVLANASPMEQKQMIGEMLYMRIAPAQPDLAGKITGMLLEMENAELIHLLDNDDALQS 645
Query: 559 KVAEAMEVLRSVAQQQANNPA 579
KV EA+ VL Q++ + PA
Sbjct: 646 KVGEAIAVLHEYTQKEGDAPA 666
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
+++ +LY+ +L+ +V D +L D F G + S +V R S G+G+V +++P +A
Sbjct: 331 SKYQGVNLYIKNLEDDVDDEKLRDAFEPFGAITSAKVMR-TEGGTSKGFGFVCFSSPDEA 389
Query: 85 ARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKN 124
+A+ +N + +K + + + R R+ I +N
Sbjct: 390 TKAVAEMNNKMMGSKPLYVSLAQRREVRRQQLESQIAQRN 429
>gi|149023880|gb|EDL80377.1| rCG31475, isoform CRA_c [Rattus norvegicus]
Length = 630
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 235/425 (55%), Positives = 307/425 (72%), Gaps = 26/425 (6%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+ + + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G SKG+ FV FE +E+A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAANKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 202 -VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ K K F NV++KN E DE+L+++F ++G S VMRD GKSK FGFV++E
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDENLRELFSQFGKTLSVKVMRDCSGKSKGFGFVSYEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAVE +NGK+ + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL
Sbjct: 242 EDANKAVEEMNGKEMSGKSIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ S
Sbjct: 302 DDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 380 KPLYVAVAQRKEERRARLQAQF----------------SQMRPVAMG---PSVPP---RM 417
KPLYVA+AQRKEER+A L Q+ +Q +P A G P+VP R
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP 420
Query: 418 PMYPP 422
P Y P
Sbjct: 421 PYYTP 425
>gi|402854027|ref|XP_003891682.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Papio anubis]
Length = 660
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 236/425 (55%), Positives = 306/425 (72%), Gaps = 26/425 (6%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+ + + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G SKG+ FV FE +E+A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 202 -VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ K K F NV++KN E DE LK++F ++G S VMRD GKSK FGFV++E
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAVE +NGK+ + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL
Sbjct: 242 EDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ S
Sbjct: 302 DDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 380 KPLYVAVAQRKEERRARLQAQF----------------SQMRPVAMG---PSVPP---RM 417
KPLYVA+AQRKEER+A L Q+ +Q +P A G P+VP R
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP 420
Query: 418 PMYPP 422
P Y P
Sbjct: 421 PYYTP 425
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 60/75 (80%), Gaps = 2/75 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A P++Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 569 PLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPE 626
Query: 555 ALKAKVAEAMEVLRS 569
+L++KV EA+ VL++
Sbjct: 627 SLRSKVDEAVAVLQA 641
>gi|149244358|ref|XP_001526722.1| polyadenylate-binding protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|158514320|sp|A5DW14.1|PABP_LODEL RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|146449116|gb|EDK43372.1| polyadenylate-binding protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 661
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 264/605 (43%), Positives = 371/605 (61%), Gaps = 52/605 (8%)
Query: 17 GVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYV 76
G ++G + N + SLYVG+L+ +V ++ L+++FS +GQV S+RVCRD +++SLGY YV
Sbjct: 57 GESSGIAEN---SASLYVGELNPSVNEATLFEIFSPIGQVASIRVCRDAVSKKSLGYAYV 113
Query: 77 NYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHD 136
NY D +A++ LN+TP+ + RIM+S RDPS R+SG GNIFIKNL +ID+KALHD
Sbjct: 114 NYHKLEDGEKAIEELNYTPVEGRPCRIMWSQRDPSARRSGDGNIFIKNLHPAIDNKALHD 173
Query: 137 TFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRK 196
TFS+FG ILS K+ATD GQSK FGFV +E +E+AQ AI+ +NGML+ND++V+VG + K
Sbjct: 174 TFSAFGKILSVKVATDDLGQSKCFGFVHYETEEAAQAAIESVNGMLLNDREVYVGKHVSK 233
Query: 197 QERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFV 254
++RE+ +K + N++VKN+D + T+++ +++F +G ITS + +D +GKSK FGFV
Sbjct: 234 KDRESKLEEMKANYTNIYVKNIDLAYTEKEFEELFAPFGKITSIYLEKDAEGKSKGFGFV 293
Query: 255 NFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNL 314
NFE + AAKAVE LN K+ + ++ YVG+AQKK ER +ELK Q+E E + K+QG+NL
Sbjct: 294 NFEEHEAAAKAVEELNDKEINGQKIYVGRAQKKRERTEELKKQYEAVRLEKLSKYQGVNL 353
Query: 315 YIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNG 374
++KNL + ID EKL+E F FGTITS KVM D +G SKG GFV FSTPEEA++A+ EMN
Sbjct: 354 FVKNLDEQIDSEKLEEEFKPFGTITSSKVMVDDAGKSKGFGFVCFSTPEEATKAITEMNQ 413
Query: 375 KMIVSKPLYVAVAQRKEERRARLQAQFS-----QMRPVAMGPSVPPR-MPMYPPGPSGLG 428
+M+ KPLYVA+AQRK+ RR++L+ Q +M+ A +P + MP P G
Sbjct: 414 RMVNGKPLYVALAQRKDVRRSQLEQQIQARNQMRMQNAAAAGGLPGQFMP-----PMFYG 468
Query: 429 QQFLY-----GQAPPAIIPPQMPPRGHAYRYPL-----GRNMQDFPF--------DMGAG 470
QQ + G AP PQM RG +P G N Q P D
Sbjct: 469 QQGFFPPNGRGNAPFPGPNPQMMMRGRGQPFPEQWPRPGPNGQPVPVYGMPPQFQDFNGQ 528
Query: 471 SMLPVPVDMGAG------------IPRRDASVGQPMPITALSTALANASPEQQRTLLGES 518
+M P P R A G +P L+ +ANA E Q+ +LGE
Sbjct: 529 NMRPQQQQQQQQQQQQQQQQQRGYYPNRPA--GGNVPAKDLAALIANAPLEAQKRILGEE 586
Query: 519 LYPLV----EQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQ 574
LY + + E +AA K+TGM+L ++ E+L LL+ E EA+ +
Sbjct: 587 LYQRIVATGKAQEPEAAGKITGMMLGLENQEILDLLDDEELFNNHFEEALNAFEEYKNSE 646
Query: 575 ANNPA 579
N A
Sbjct: 647 GANAA 651
>gi|402854029|ref|XP_003891683.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Papio anubis]
Length = 644
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 236/425 (55%), Positives = 306/425 (72%), Gaps = 26/425 (6%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+ + + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G SKG+ FV FE +E+A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 202 -VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ K K F NV++KN E DE LK++F ++G S VMRD GKSK FGFV++E
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAVE +NGK+ + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL
Sbjct: 242 EDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ S
Sbjct: 302 DDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 380 KPLYVAVAQRKEERRARLQAQF----------------SQMRPVAMG---PSVPP---RM 417
KPLYVA+AQRKEER+A L Q+ +Q +P A G P+VP R
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP 420
Query: 418 PMYPP 422
P Y P
Sbjct: 421 PYYTP 425
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 60/75 (80%), Gaps = 2/75 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A P++Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 553 PLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPE 610
Query: 555 ALKAKVAEAMEVLRS 569
+L++KV EA+ VL++
Sbjct: 611 SLRSKVDEAVAVLQA 625
>gi|332248413|ref|XP_003273358.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Nomascus
leucogenys]
gi|355557859|gb|EHH14639.1| hypothetical protein EGK_00600 [Macaca mulatta]
gi|383411103|gb|AFH28765.1| polyadenylate-binding protein 4 isoform 1 [Macaca mulatta]
gi|384941238|gb|AFI34224.1| polyadenylate-binding protein 4 isoform 1 [Macaca mulatta]
Length = 660
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 236/425 (55%), Positives = 306/425 (72%), Gaps = 26/425 (6%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+ + + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G SKG+ FV FE +E+A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 202 -VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ K K F NV++KN E DE LK++F ++G S VMRD GKSK FGFV++E
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAVE +NGK+ + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL
Sbjct: 242 EDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ S
Sbjct: 302 DDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 380 KPLYVAVAQRKEERRARLQAQF----------------SQMRPVAMG---PSVPP---RM 417
KPLYVA+AQRKEER+A L Q+ +Q +P A G P+VP R
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP 420
Query: 418 PMYPP 422
P Y P
Sbjct: 421 PYYTP 425
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 60/75 (80%), Gaps = 2/75 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A P++Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 569 PLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPE 626
Query: 555 ALKAKVAEAMEVLRS 569
+L++KV EA+ VL++
Sbjct: 627 SLRSKVDEAVAVLQA 641
>gi|354485887|ref|XP_003505113.1| PREDICTED: polyadenylate-binding protein 4-like [Cricetulus
griseus]
Length = 685
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 235/421 (55%), Positives = 304/421 (72%), Gaps = 26/421 (6%)
Query: 26 QFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAA 85
+ SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ PADA
Sbjct: 29 HYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAE 88
Query: 86 RALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNIL 145
RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+FGNIL
Sbjct: 89 RALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNIL 148
Query: 146 SCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET-VAI 204
SCK+ D +G SKG+ FV FE +E+A AI+K+NGML+ND++VFVG F ++ERE +
Sbjct: 149 SCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGA 207
Query: 205 KTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAA 263
K K F NV++KN E D++LK++F ++G S VMRD GKSK FGFV++E +DA
Sbjct: 208 KAKEFTNVYIKNFGEEVDDDNLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDAN 267
Query: 264 KAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSI 323
KAVE +NGK+ + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL D+I
Sbjct: 268 KAVEEMNGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTI 327
Query: 324 DDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLY 383
DDEKL++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ SKPLY
Sbjct: 328 DDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLY 386
Query: 384 VAVAQRKEERRARLQAQF----------------SQMRPVAMG---PSVPP---RMPMYP 421
VA+AQRKEER+A L Q+ SQ +P A G P+VP R P Y
Sbjct: 387 VALAQRKEERKAHLTNQYMQRVAGMRALPANAILSQFQPAAGGYFVPAVPQAQGRPPYYT 446
Query: 422 P 422
P
Sbjct: 447 P 447
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 108/196 (55%), Gaps = 20/196 (10%)
Query: 21 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYAN 80
GA +F T++Y+ + V D L +LFSQ G+ LSV+V RD S +S G+G+V+Y
Sbjct: 206 GAKAKEF--TNVYIKNFGEEVDDDNLKELFSQFGKTLSVKVMRDPSG-KSKGFGFVSYEK 262
Query: 81 PADAARALDVLNFTPLNNKSI----------------RIMYSHRDPSIRKSGTGNIFIKN 124
DA +A++ +N ++ K+I R + I + N++IKN
Sbjct: 263 HEDANKAVEEMNGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN 322
Query: 125 LDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLIN 184
LD +ID + L FS FG+I S K+ + G+SKGFGFV F + E A A+ ++NG ++
Sbjct: 323 LDDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVG 381
Query: 185 DKQVFVGHFLRKQERE 200
K ++V RK+ER+
Sbjct: 382 SKPLYVALAQRKEERK 397
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 60/75 (80%), Gaps = 2/75 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A P++Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 590 PLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPE 647
Query: 555 ALKAKVAEAMEVLRS 569
+L++KV EA+ VL++
Sbjct: 648 SLRSKVDEAVAVLQA 662
>gi|94730404|sp|P20965.3|PABPA_XENLA RecName: Full=Polyadenylate-binding protein 1-A; Short=PABP-1-A;
Short=Poly(A)-binding protein 1-A; Short=xPABP1-A;
AltName: Full=Cytoplasmic poly(A)-binding protein 1-A
gi|30353795|gb|AAH52100.1| Pabpc1 protein [Xenopus laevis]
Length = 633
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 248/513 (48%), Positives = 332/513 (64%), Gaps = 39/513 (7%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
S + SLYVGDL +VT++ LY+ FS G +LS+RVCRD+ TRRSLGY YVN+ PA
Sbjct: 4 SAPSYPMASLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPA 63
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
DA RALD +NF + + +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FG
Sbjct: 64 DAERALDTMNFDVIKGRPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFG 123
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 202
NILSCK+ D +G SKG+GFV FE +E+A+ AIDK+NGML+ND++VFVG F ++ERE
Sbjct: 124 NILSCKVVCDENG-SKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSRKEREAE 182
Query: 203 --AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
A +F NV++KN + DE LK++FG+YG S VM D +GKSK FGFV+FE +
Sbjct: 183 LGARAKEFTNVYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDDNGKSKGFGFVSFERHE 242
Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
DA KAV+ +NGK + + +VG+AQKK ER+ ELK +FEQ ++ + ++QG+NLY+KNL
Sbjct: 243 DAQKAVDEMNGKDMNGKSMFVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLD 302
Query: 321 DSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSK 380
D IDDE+L++ F FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +K
Sbjct: 303 DGIDDERLRKEFLPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATK 361
Query: 381 PLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAI 440
PLYVA+AQRKEER+A L Q+ Q P+ P + Y P PS + PPA
Sbjct: 362 PLYVALAQRKEERQAHLTNQYMQRMASVRVPN--PVINPYQPPPSS----YFMAAIPPA- 414
Query: 441 IPPQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALS 500
+ A YP G+ Q P PR A +P P +
Sbjct: 415 -------QNRAAYYPPGQIAQLRP------------------SPRWTAQGARPHPFQNMP 449
Query: 501 TALANASPEQQRTLLGESLYPLVEQLERDAAAK 533
A+ +P R ++ P Q+ R +A+
Sbjct: 450 GAIRPTAP---RPPTFSTMRPASNQVPRVMSAQ 479
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 104/298 (34%), Positives = 174/298 (58%), Gaps = 16/298 (5%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFEN 167
+PS ++++ +L + + L++ FS G ILS ++ D + +S G+ +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
A+ A+D +N +I + V + +R+ K+ N+F+KNLD+S ++ L
Sbjct: 62 PADAERALDTMNFDVIKGRPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYD 117
Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
F +G I S V+ D +G SK +GFV+FE + A +A++ +NG +DR+ +VG+ + +
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSR 176
Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
ERE EL + ++ N+YIKN GD ++DE+LKE+F ++G S KVM D
Sbjct: 177 KEREAELGARAKEF----------TNVYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDD 226
Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
+G SKG GFV+F E+A +A+ EMNGK + K ++V AQ+K ER+ L+ +F QM+
Sbjct: 227 NGKSKGFGFVSFERHEDAQKAVDEMNGKDMNGKSMFVGRAQKKVERQTELKRKFEQMK 284
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 542 PLTA--SMLAAAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPE 599
Query: 555 ALKAKVAEAMEVLRSVAQQQA 575
+L++KV EA+ VL++ ++A
Sbjct: 600 SLRSKVDEAVAVLQAHQAKEA 620
>gi|64970|emb|CAA40721.1| polyA binding protein [Xenopus laevis]
Length = 633
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 248/513 (48%), Positives = 332/513 (64%), Gaps = 39/513 (7%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
S + SLYVGDL +VT++ LY+ FS G +LS+RVCRD+ TRRSLGY YVN+ PA
Sbjct: 4 SAPSYPMASLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPA 63
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
DA RALD +NF + + +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FG
Sbjct: 64 DAERALDTMNFDVIKGRPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFG 123
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 202
NILSCK+ D +G SKG+GFV FE +E+A+ AIDK+NGML+ND++VFVG F ++ERE
Sbjct: 124 NILSCKVVCDENG-SKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSRKEREAE 182
Query: 203 --AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
A +F NV++KN + DE LK++FG+YG S VM D +GKSK FGFV+FE +
Sbjct: 183 LGARAKEFTNVYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDDNGKSKGFGFVSFERHE 242
Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
DA KAV+ +NGK + + +VG+AQKK ER+ ELK +FEQ ++ + ++QG+NLY+KNL
Sbjct: 243 DAQKAVDEMNGKDMNGKSMFVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLD 302
Query: 321 DSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSK 380
D IDDE+L++ F FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +K
Sbjct: 303 DGIDDERLRKEFLPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATK 361
Query: 381 PLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAI 440
PLYVA+AQRKEER+A L Q+ Q P+ P + Y P PS + PPA
Sbjct: 362 PLYVALAQRKEERQAHLTNQYMQRMASVRVPN--PVINPYQPPPSS----YFMAAIPPA- 414
Query: 441 IPPQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALS 500
+ A YP G+ Q P PR A +P P +
Sbjct: 415 -------QNRAAYYPPGQIAQLSP------------------SPRWTAQGARPHPFQNMP 449
Query: 501 TALANASPEQQRTLLGESLYPLVEQLERDAAAK 533
A+ +P R ++ P Q+ R +A+
Sbjct: 450 GAIRPTAP---RPPTFSTMRPASNQVPRVMSAQ 479
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 104/298 (34%), Positives = 174/298 (58%), Gaps = 16/298 (5%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFEN 167
+PS ++++ +L + + L++ FS G ILS ++ D + +S G+ +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
A+ A+D +N +I + V + +R+ K+ N+F+KNLD+S ++ L
Sbjct: 62 PADAERALDTMNFDVIKGRPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYD 117
Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
F +G I S V+ D +G SK +GFV+FE + A +A++ +NG +DR+ +VG+ + +
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSR 176
Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
ERE EL + ++ N+YIKN GD ++DE+LKE+F ++G S KVM D
Sbjct: 177 KEREAELGARAKEF----------TNVYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDD 226
Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
+G SKG GFV+F E+A +A+ EMNGK + K ++V AQ+K ER+ L+ +F QM+
Sbjct: 227 NGKSKGFGFVSFERHEDAQKAVDEMNGKDMNGKSMFVGRAQKKVERQTELKRKFEQMK 284
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 542 PLTA--SMLAAAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPE 599
Query: 555 ALKAKVAEAMEVLRSVAQQQA 575
+L++KV EA+ VL++ ++A
Sbjct: 600 SLRSKVDEAVAVLQAHQAKEA 620
>gi|332248415|ref|XP_003273359.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Nomascus
leucogenys]
gi|383411101|gb|AFH28764.1| polyadenylate-binding protein 4 isoform 2 [Macaca mulatta]
gi|384941236|gb|AFI34223.1| polyadenylate-binding protein 4 isoform 2 [Macaca mulatta]
Length = 644
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 236/425 (55%), Positives = 306/425 (72%), Gaps = 26/425 (6%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+ + + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G SKG+ FV FE +E+A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 202 -VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ K K F NV++KN E DE LK++F ++G S VMRD GKSK FGFV++E
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAVE +NGK+ + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL
Sbjct: 242 EDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ S
Sbjct: 302 DDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 380 KPLYVAVAQRKEERRARLQAQF----------------SQMRPVAMG---PSVPP---RM 417
KPLYVA+AQRKEER+A L Q+ +Q +P A G P+VP R
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP 420
Query: 418 PMYPP 422
P Y P
Sbjct: 421 PYYTP 425
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 60/75 (80%), Gaps = 2/75 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A P++Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 553 PLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPE 610
Query: 555 ALKAKVAEAMEVLRS 569
+L++KV EA+ VL++
Sbjct: 611 SLRSKVDEAVAVLQA 625
>gi|196008415|ref|XP_002114073.1| hypothetical protein TRIADDRAFT_27786 [Trichoplax adhaerens]
gi|190583092|gb|EDV23163.1| hypothetical protein TRIADDRAFT_27786 [Trichoplax adhaerens]
Length = 622
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 226/405 (55%), Positives = 298/405 (73%), Gaps = 11/405 (2%)
Query: 32 LYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVL 91
LYVGDL +V ++QLY+ F+ G + S+RVCRD TRRSLGY YVN+ P DA RALD L
Sbjct: 21 LYVGDLAPDVNEAQLYEKFNSTGPISSIRVCRDAITRRSLGYAYVNFQQPNDAERALDTL 80
Query: 92 NFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIAT 151
NF P+N K RIM+S RDPS+R+SG GNIFIKNL+K ID+KA++DTFS+FGNILSCKIA
Sbjct: 81 NFDPVNGKPCRIMWSQRDPSLRRSGVGNIFIKNLEKDIDNKAIYDTFSAFGNILSCKIAL 140
Query: 152 DGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER-ETVA-IKTKFN 209
D +G SKG+ FV FE +E+A AI+K+NGML++ K+VFVGHF+ ++ER E + + K+
Sbjct: 141 DENGNSKGYAFVHFETQEAANRAIEKVNGMLLSGKKVFVGHFMSRKERMEKIGNLAAKYT 200
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEAL 269
N++VKN + +D++ + +F + G I S VVMRD GKS+ FGFV++E + A KAVE L
Sbjct: 201 NLYVKNFRDDISDDEFRDLFEQCGKIVSCVVMRDDSGKSRGFGFVSYETHEAAQKAVETL 260
Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLK 329
N K+FD R YV +AQKKSER L+ Q+EQ +E + +FQG+NLY+KNL D IDD KL+
Sbjct: 261 NEKEFDLRRMYVARAQKKSERSALLRRQYEQKKQEMMKRFQGVNLYVKNLDDVIDDAKLR 320
Query: 330 ELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQR 389
+ F+ FGTITS KVM D GIS+G GFV FS+PEEA++A+ EMNG++I+SKPLYVA+AQR
Sbjct: 321 QEFANFGTITSAKVMSDEKGISRGFGFVCFSSPEEATKAVTEMNGRIIISKPLYVALAQR 380
Query: 390 KEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYG 434
KE+R+A+L AQ+ Q R+P PG G+ Q F G
Sbjct: 381 KEDRKAQLAAQYVQRMSTL-------RIPQ--PGQPGVNQMFQQG 416
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
Query: 499 LSTALANASPEQQRTLLGESLYPLVEQL-ERDAAAKVTGMLLEMDQTEVLHLLESPEALK 557
L+T L+ QQ+ +LGE LYP VE + + A K+TGMLLE++ EVLH+LES EAL
Sbjct: 543 LTTHLSQVDEPQQKQILGEKLYPRVEAICGSEKAGKITGMLLEIENAEVLHMLESKEALD 602
Query: 558 AKVAEAMEVLRSVAQQQANN 577
+KV EA++VL ++ Q +N
Sbjct: 603 SKVQEAIDVLDKHSKTQESN 622
>gi|402225283|gb|EJU05344.1| polyadenylate binding protein [Dacryopinax sp. DJM-731 SS1]
Length = 716
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 235/445 (52%), Positives = 318/445 (71%), Gaps = 24/445 (5%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
SLYVG+LD VT++ L+++F+ +G V SVRVCRD TRRSLGY YVNY N D RALD
Sbjct: 74 VSLYVGELDPQVTEAMLFEIFNMIGPVASVRVCRDAVTRRSLGYAYVNYLNYNDGERALD 133
Query: 90 VLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKI 149
LN++ + K RIM+S RDP +RK+G GNIFIKNLD+ ID+KALHDTF++FG +LSCK+
Sbjct: 134 QLNYSQIRGKPCRIMWSQRDPGLRKTGQGNIFIKNLDQGIDNKALHDTFAAFGTVLSCKV 193
Query: 150 ATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTK 207
ATD SG SKG+GFV +++ E+A+ AI +NGML+NDK+VFVG + ++ER++ +K+
Sbjct: 194 ATDDSGLSKGYGFVHYDSNEAAEAAIKAVNGMLLNDKKVFVGQHISRKERQSKIDEMKSH 253
Query: 208 FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVE 267
F N++VKNLD +E+ + +F ++G ITSAV+ +D +G SK FGFVNFEN +DA +AVE
Sbjct: 254 FTNLYVKNLDTEVGEEEFEGLFSQFGPITSAVIQKDEEGNSKGFGFVNFENHEDAQRAVE 313
Query: 268 ALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEK 327
L+ K+ + +VG+AQKKSERE+EL+ Q+EQA E K+QG NLYIKNL D +DDEK
Sbjct: 314 ELDNKEIHGKPVFVGRAQKKSEREEELRKQYEQAKYEKAGKYQGSNLYIKNLEDDVDDEK 373
Query: 328 LKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 387
L+ F FGTITSCKVMRD G SKG GFV FS+P+EA+RA++EMN K++ +KPLYVA+A
Sbjct: 374 LRAEFEPFGTITSCKVMRDEKGTSKGFGFVCFSSPDEATRAMSEMNNKIVGTKPLYVALA 433
Query: 388 QRKEERRARLQAQFS----QMRPVAMGPSVPPRMP------MYPPGPSGL--GQQFLYGQ 435
QRK+ R+ +L++Q + Q+R +A + P MP Y P +G GQ+ + G
Sbjct: 434 QRKDVRKQQLESQIAQRNNQLR-LAAAQGI-PNMPYGAAPMFYQPAAAGYPPGQRPVMGY 491
Query: 436 APPAIIPPQMPPRGHAYRYPLGRNM 460
PPA P +M RY G+ M
Sbjct: 492 -PPAPGPARM-------RYAPGQQM 508
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 52/69 (75%), Gaps = 4/69 (5%)
Query: 510 QQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVL-- 567
+Q+ +LGE++Y + ++ + A K+TGMLLEM+ TE++HL+E+P+AL+ KVAEA+ VL
Sbjct: 645 EQKQILGEAIYMKIHAMQPELAGKITGMLLEMETTELIHLIETPDALQNKVAEAITVLEE 704
Query: 568 --RSVAQQQ 574
++ QQQ
Sbjct: 705 FSKNAEQQQ 713
>gi|126137970|ref|XP_001385508.1| Polyadenylate-binding protein, cytoplasmic and nuclear
(Poly(A)-binding protein) (PABP) (ARS consensus binding
protein ACBP-67) (Polyadenylate tail-binding protein)
[Scheffersomyces stipitis CBS 6054]
gi|158513407|sp|A3LXL0.1|PABP_PICST RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|126092786|gb|ABN67479.1| Polyadenylate-binding protein, cytoplasmic and nuclear
(Poly(A)-binding protein) (PABP) (ARS consensus binding
protein ACBP-67) (Polyadenylate tail-binding protein)
[Scheffersomyces stipitis CBS 6054]
Length = 632
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 265/572 (46%), Positives = 368/572 (64%), Gaps = 51/572 (8%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
T SLYVG+L+ +V ++ L+++FS +GQV S+RVCRD +++SLGY YVNY D +A+
Sbjct: 51 TASLYVGELNTSVNEATLFEIFSPIGQVSSIRVCRDAVSKKSLGYAYVNYHKMEDGEKAI 110
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LN++P+ + RIM+S RDPS R+SG GNIFIKNL +ID+KALHDTFS+FG ILSCK
Sbjct: 111 EELNYSPIEGRPCRIMWSQRDPSARRSGDGNIFIKNLHPAIDNKALHDTFSTFGKILSCK 170
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKT 206
+ATD GQSK FGFV +E E+A+ AI+ +NGML+ND++VFVG + K++RE+ IK
Sbjct: 171 VATDDMGQSKCFGFVHYETAEAAEAAIENVNGMLLNDREVFVGKHISKKDRESKFEEIKA 230
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
F N++VKN+D ++EDLKK+F YG ITS + +D +GKSK FGFVN+E + A KAV
Sbjct: 231 NFTNIYVKNIDLEYSEEDLKKLFTPYGAITSIYLEKDAEGKSKGFGFVNYEGHEAAVKAV 290
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
E LN K+ + ++ YVG+AQKK ER +ELK Q+E E + K+QG+NL+IKNL D+ID E
Sbjct: 291 EELNDKEINGQKIYVGRAQKKRERMEELKKQYENTRLEKLSKYQGVNLFIKNLDDTIDSE 350
Query: 327 KLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 386
KL+E F FGTITS +VM D +G SKG GFV FS+PEEA++A+ EMN +M KPLYVA+
Sbjct: 351 KLEEEFKPFGTITSARVMVDETGKSKGFGFVCFSSPEEATKAITEMNQRMFFGKPLYVAL 410
Query: 387 AQRKEERRARLQAQFS-----QMRPVAMGPSVPPRM--PMYPPGPSGLGQQFLY-----G 434
AQRK+ RR++L+ Q +M+ A +P + PM+ GQQ + G
Sbjct: 411 AQRKDVRRSQLEQQIQARNQMRMQNAAATGGIPGQFIPPMF------YGQQGFFPPNGRG 464
Query: 435 QAP-PAIIPPQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPV---------DM-GAGI 483
AP P P + RG + P + +P G PVPV D G I
Sbjct: 465 NAPFPGPNPQMIMRRGQPFGGP-----EQWPRPGPNGQ--PVPVYGIPPQAYSDFNGQNI 517
Query: 484 -------PRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLV----EQLERDAAA 532
P R+ + G+ L+ +A+A P+QQ+ +LGE LYP + + E +AA
Sbjct: 518 RQQRGYYPNRNQNKGRQQ--RDLAAIIASAPPDQQKRILGEELYPKIVATGKAQEPEAAG 575
Query: 533 KVTGMLLEMDQTEVLHLLESPEALKAKVAEAM 564
K+TGM+L++D E+L LLE E +A+
Sbjct: 576 KITGMMLDLDNQEILALLEDDELFTNHFEDAL 607
>gi|448115215|ref|XP_004202770.1| Piso0_001626 [Millerozyma farinosa CBS 7064]
gi|359383638|emb|CCE79554.1| Piso0_001626 [Millerozyma farinosa CBS 7064]
Length = 626
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 256/552 (46%), Positives = 353/552 (63%), Gaps = 35/552 (6%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVG+L+ +V ++ L+++FS VGQV S+RVCRD T++SLGY YVN+ D +A+
Sbjct: 49 SASLYVGELNPSVNEASLFEIFSPVGQVSSIRVCRDAVTKKSLGYAYVNFHKLEDGEKAI 108
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
D LN++ ++ + RIM+S RDPS+R++G GNIFIKNL +ID+KALHDTFS+FG ILSCK
Sbjct: 109 DDLNYSLIDGRPCRIMWSQRDPSLRRNGEGNIFIKNLHPAIDNKALHDTFSAFGKILSCK 168
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKT 206
+ATD G SK FGFV +E E+A+ AI+ +NGML+ND++V+VG + K++RE+ +K
Sbjct: 169 VATDEQGNSKCFGFVHYETAEAARAAIENVNGMLLNDREVYVGKHVSKKDRESKFEEMKA 228
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
F NV+VKN+D ++E+++ +F YG ITS + +D +GKSK FGFVNFE+ + A KAV
Sbjct: 229 NFTNVYVKNIDLGFSEEEMRNLFEPYGKITSLHLEKDAEGKSKGFGFVNFESHEAAVKAV 288
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
E LN K + + YVG+AQKK ER +ELK Q+E A E + K+QG+NL++KNL DSID
Sbjct: 289 EELNDKDINGQNLYVGRAQKKRERIEELKRQYETARLEKLSKYQGVNLFVKNLDDSIDSV 348
Query: 327 KLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 386
KL+E F FGTITS +VM D G SKG GFV FS+PEEA++A+ EMN +M KPLYVA+
Sbjct: 349 KLEEEFKPFGTITSARVMVDEHGKSKGFGFVCFSSPEEATKAITEMNQRMFHGKPLYVAL 408
Query: 387 AQRKEERRARLQAQFSQMRPVAM----------GPSVPPRMPMYPPG---PSGLGQQFLY 433
AQRK+ RR++L+ Q + M G +PP PG P+G G
Sbjct: 409 AQRKDVRRSQLEQQIQARNQMRMQNAAATGGIPGQFIPPMFYGQQPGFFPPNGRGSAPFP 468
Query: 434 GQAPPAIIPPQM--PPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVG 491
G P ++P PP+G R G N Q P + PV D A R
Sbjct: 469 GPNPQMMVPRGQIPPPQGQWPR--AGPNGQPVP----VYGIPPVYGDFAAANGGRQQRGY 522
Query: 492 QP--------MPITALSTALANASPEQQRTLLGESLYPLVEQLER----DAAAKVTGMLL 539
P P L+ LA+A +QQ+ +LGE LYP + + R +AA K+TGM+L
Sbjct: 523 YPNRGQNQKGRPQKDLAALLASAPVDQQKRILGEELYPKIVSMGRAQEPEAAGKITGMML 582
Query: 540 EMDQTEVLHLLE 551
++D E+L LLE
Sbjct: 583 DLDNQEILALLE 594
>gi|13096978|gb|AAH03283.1| Poly(A) binding protein, cytoplasmic 4 [Mus musculus]
Length = 660
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 235/425 (55%), Positives = 306/425 (72%), Gaps = 26/425 (6%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+ + + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFDVMKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G SKG+ FV FE +E+A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 202 -VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ K K F NV++KN E D +LK++F ++G S VMRD GKSK FGFV++E
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDSSGKSKGFGFVSYEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAVE +NGK+ + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL
Sbjct: 242 EDANKAVEEMNGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ S
Sbjct: 302 DDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 380 KPLYVAVAQRKEERRARLQAQF----------------SQMRPVAMG---PSVPP---RM 417
KPLYVA+AQRKEER+A L Q+ +Q +P A G P+VP R
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPASAILNQFQPAAGGYFVPAVPQAQGRP 420
Query: 418 PMYPP 422
P Y P
Sbjct: 421 PYYTP 425
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 60/75 (80%), Gaps = 2/75 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A P++Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 569 PLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPE 626
Query: 555 ALKAKVAEAMEVLRS 569
+L++KV EA+ VL++
Sbjct: 627 SLRSKVDEAVAVLQA 641
>gi|169853086|ref|XP_001833224.1| polyadenylate-binding protein [Coprinopsis cinerea okayama7#130]
gi|116505602|gb|EAU88497.1| polyadenylate-binding protein [Coprinopsis cinerea okayama7#130]
Length = 681
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 213/383 (55%), Positives = 298/383 (77%), Gaps = 2/383 (0%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVG+LD VT++ L+++F+ +G V S+RVCRD TRRSLGY YVNY N AD RAL
Sbjct: 48 SASLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERAL 107
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LN++ + N+ RIM+S RDP++RK+G GNIFIKNLD++ID+KALHDTF++FG +LSCK
Sbjct: 108 EQLNYSLIKNRPCRIMWSQRDPALRKTGQGNIFIKNLDEAIDNKALHDTFAAFGTVLSCK 167
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKT 206
+ATD +G+SKG+GFV +E E+A+NAI +NGML+NDK+V+VGH + ++ER++ ++
Sbjct: 168 VATDETGRSKGYGFVHYETAEAAENAIKAVNGMLLNDKKVYVGHHISRKERQSKLEEMRA 227
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
+F N++VKNLD T ++ ++F +YG +TSAV+ D +GKSK FGFVNFE D+A KAV
Sbjct: 228 QFTNLYVKNLDPEVTQDEFIELFKKYGNVTSAVISVDEEGKSKGFGFVNFETHDEAQKAV 287
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
+ LN + ++ +V +AQKK+ERE+EL+ +EQA E + K+QG+NLYIKNL D +DD+
Sbjct: 288 DELNDFELKGKKLFVSRAQKKAEREEELRRSYEQAKLEKLSKYQGVNLYIKNLEDDVDDD 347
Query: 327 KLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 386
KL+ F FGTITSCKVMRD G SKG GFV FS+P+EA++A+AEMN KMI +KPLYV++
Sbjct: 348 KLRAEFEPFGTITSCKVMRDEKGQSKGFGFVCFSSPDEATKAVAEMNNKMIGTKPLYVSL 407
Query: 387 AQRKEERRARLQAQFSQMRPVAM 409
AQR+E RR +L++Q +Q + M
Sbjct: 408 AQRREVRRQQLESQIAQRNQIRM 430
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 48/67 (71%)
Query: 508 PEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVL 567
P +Q+ +LGE+LY + + + A K+TGMLLEMD E+LHLL++ EAL AKV EA+ VL
Sbjct: 609 PMEQKQMLGEALYVRISPTQPELAGKITGMLLEMDNNELLHLLDNAEALNAKVTEALSVL 668
Query: 568 RSVAQQQ 574
+ +++
Sbjct: 669 QDFGKEE 675
>gi|41053728|ref|NP_957176.1| poly A binding protein, cytoplasmic 1 b [Danio rerio]
gi|37590406|gb|AAH59662.1| Poly A binding protein, cytoplasmic 1 b [Danio rerio]
gi|39645430|gb|AAH63948.1| Poly A binding protein, cytoplasmic 1 b [Danio rerio]
Length = 634
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 227/406 (55%), Positives = 297/406 (73%), Gaps = 4/406 (0%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
S + SLYVGDL +VT++ LY+ FS G +LS+RVCRD+ TRRSLGY YVN+ PA
Sbjct: 4 SAPSYPMASLYVGDLHQDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQPA 63
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
DA RALD +NF + + +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FG
Sbjct: 64 DAERALDTMNFDVIKGRPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFG 123
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 202
NILSCK+ D +G SKG+GFV FE +E+A+ AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 124 NILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Query: 203 --AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
A +F NV++KN E D+ LK IF +YG S VM D +GKS+ FGFV+FE +
Sbjct: 183 LGARAKEFTNVYIKNFGEDMDDDKLKDIFSKYGNAMSIRVMTDENGKSRGFGFVSFERHE 242
Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
DA +AV+ +NGK+ + + YVG+AQKK ER+ ELK +FEQ ++ + ++QG+NLY+KNL
Sbjct: 243 DAQRAVDEMNGKEMNGKLIYVGRAQKKVERQTELKRKFEQMKQDRMTRYQGVNLYVKNLD 302
Query: 321 DSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSK 380
D IDDE+L++ FS FGTITS KVM D G SKG GFV FS+PEEA++A+ EMNG+++ +K
Sbjct: 303 DGIDDERLRKEFSPFGTITSAKVMMD-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATK 361
Query: 381 PLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSG 426
PLYVA+AQRKEER+A L Q+ Q P P P PSG
Sbjct: 362 PLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSG 407
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 105/298 (35%), Positives = 175/298 (58%), Gaps = 16/298 (5%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFEN 167
+PS ++++ +L + + L++ FS G ILS ++ D + +S G+ +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHQDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
A+ A+D +N +I + V + +R+ K+ N+F+KNLD+S ++ L
Sbjct: 62 PADAERALDTMNFDVIKGRPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYD 117
Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
F +G I S V+ D +G SK +GFV+FE + A +A+E +NG +DR+ +VG+ + +
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
ERE EL + ++ N+YIKN G+ +DD+KLK++FS++G S +VM D
Sbjct: 177 KEREAELGARAKEF----------TNVYIKNFGEDMDDDKLKDIFSKYGNAMSIRVMTDE 226
Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
+G S+G GFV+F E+A RA+ EMNGK + K +YV AQ+K ER+ L+ +F QM+
Sbjct: 227 NGKSRGFGFVSFERHEDAQRAVDEMNGKEMNGKLIYVGRAQKKVERQTELKRKFEQMK 284
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 542 PLTA--SMLAAAPPQEQKQMLGERLFPLIQNMHPSLAGKITGMLLEIDNSELLHMLESPE 599
Query: 555 ALKAKVAEAMEVLRSVAQQQA 575
+L++KV EA+ VL++ ++A
Sbjct: 600 SLRSKVDEAVAVLQAHQAKEA 620
>gi|34419622|ref|NP_570951.2| polyadenylate-binding protein 4 isoform 1 [Mus musculus]
gi|33991671|gb|AAH56432.1| Poly(A) binding protein, cytoplasmic 4 [Mus musculus]
gi|148698437|gb|EDL30384.1| mCG5546, isoform CRA_c [Mus musculus]
Length = 660
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 235/425 (55%), Positives = 305/425 (71%), Gaps = 26/425 (6%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+ + + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFDVMKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G SKG+ FV FE +E+A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 202 -VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ K K F NV++KN E D +LK++F ++G S VMRD GKSK FGFV++E
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDSSGKSKGFGFVSYEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAVE +NGK+ + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL
Sbjct: 242 EDANKAVEEMNGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D+IDDEKL+ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ S
Sbjct: 302 DDTIDDEKLRREFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 380 KPLYVAVAQRKEERRARLQAQF----------------SQMRPVAMG---PSVPP---RM 417
KPLYVA+AQRKEER+A L Q+ +Q +P A G P+VP R
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPASAILNQFQPAAGGYFVPAVPQAQGRP 420
Query: 418 PMYPP 422
P Y P
Sbjct: 421 PYYTP 425
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 60/75 (80%), Gaps = 2/75 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A P++Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 569 PLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPE 626
Query: 555 ALKAKVAEAMEVLRS 569
+L++KV EA+ VL++
Sbjct: 627 SLRSKVDEAVAVLQA 641
>gi|301756358|ref|XP_002914026.1| PREDICTED: polyadenylate-binding protein 1-like [Ailuropoda
melanoleuca]
Length = 636
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 227/406 (55%), Positives = 296/406 (72%), Gaps = 4/406 (0%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
S + SLYVGDL +VT++ LY+ FS G +LS+R+CRD TRRSLGY YVNY P
Sbjct: 4 SAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPR 63
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
D+ RALD +NF + K +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FG
Sbjct: 64 DSERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFG 123
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 202
NILSCK+ D +G SKG+GFV FE +E+A+ AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 124 NILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Query: 203 --AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
A +F NV++KN E DE LK +FG++G S VM D GKSK FGFV+FE +
Sbjct: 183 LGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHE 242
Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
DA KAV+ +NGK+ + ++ YVG+AQKK ER+ ELK +FEQ ++ + ++QG+NLY+KNL
Sbjct: 243 DAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLD 302
Query: 321 DSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSK 380
D IDDE+L++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +K
Sbjct: 303 DGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATK 361
Query: 381 PLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSG 426
PLYVA+AQRKEER+A L Q+ Q P P P PSG
Sbjct: 362 PLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSG 407
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 108/298 (36%), Positives = 173/298 (58%), Gaps = 16/298 (5%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFEN 167
+PS ++++ +L + L++ FS G ILS +I D + +S G+ +V ++
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQ 61
Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
++ A+D +N +I K V + +R+ K+ N+F+KNLD+S ++ L
Sbjct: 62 PRDSERALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYD 117
Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
F +G I S V+ D +G SK +GFV+FE + A +A+E +NG +DR+ +VG+ + +
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
ERE EL + ++ N+YIKN G+ +DDE+LK+LF +FG S KVM D
Sbjct: 177 KEREAELGARAKEFT----------NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE 226
Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
SG SKG GFV+F E+A +A+ EMNGK + K +YV AQ+K ER+ L+ +F QM+
Sbjct: 227 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 284
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA+A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 544 PLTA--SMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPE 601
Query: 555 ALKAKVAEAMEVLRSVAQQQA 575
+L++KV EA+ VL++ ++A
Sbjct: 602 SLRSKVDEAVAVLQAHQAKEA 622
>gi|390465724|ref|XP_002750686.2| PREDICTED: polyadenylate-binding protein 4 [Callithrix jacchus]
Length = 656
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 236/425 (55%), Positives = 307/425 (72%), Gaps = 26/425 (6%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+ + + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G SKG+ FV FE +E+A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 202 -VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ K K F NV++KN E DE LK++F ++G S VMRD +GKSK FGFV++E
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFIQFGKTLSVKVMRDPNGKSKGFGFVSYEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAVE +NGK+ + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL
Sbjct: 242 EDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ S
Sbjct: 302 DDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 380 KPLYVAVAQRKEERRARLQAQF----------------SQMRPVAMG---PSVPP---RM 417
KPLYVA+AQRKEER+A L Q+ +Q +P A G P+VP R
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQVGGRP 420
Query: 418 PMYPP 422
P Y P
Sbjct: 421 PYYTP 425
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 60/75 (80%), Gaps = 2/75 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A P++Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 569 PLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPE 626
Query: 555 ALKAKVAEAMEVLRS 569
+L++KV EA+ VL++
Sbjct: 627 SLRSKVDEAVAVLQA 641
>gi|291399204|ref|XP_002715240.1| PREDICTED: poly A binding protein, cytoplasmic 4-like [Oryctolagus
cuniculus]
Length = 644
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 236/425 (55%), Positives = 305/425 (71%), Gaps = 26/425 (6%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+ + + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G SKG+ FV FE +E+A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 202 -VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ K K F NV++KN E DE LK +F ++G S VMRD GKSK FGFV++E
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKDLFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAVE +NGK+ + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL
Sbjct: 242 EDANKAVEEMNGKEIGGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ S
Sbjct: 302 DDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 380 KPLYVAVAQRKEERRARLQAQF----------------SQMRPVAMG---PSVPP---RM 417
KPLYVA+AQRKEER+A L Q+ +Q +P A G P+VP R
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP 420
Query: 418 PMYPP 422
P Y P
Sbjct: 421 PYYTP 425
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 60/75 (80%), Gaps = 2/75 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A P++Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 553 PLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPE 610
Query: 555 ALKAKVAEAMEVLRS 569
+L++KV EA+ VL++
Sbjct: 611 SLRSKVDEAVAVLQA 625
>gi|431922543|gb|ELK19486.1| Polyadenylate-binding protein 4 [Pteropus alecto]
Length = 720
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 226/384 (58%), Positives = 294/384 (76%), Gaps = 4/384 (1%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+ + + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G SKG+ FV FE +E+A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 202 -VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ K K F NV++KN E DE LK++F ++G S VMRD GKSK FGFV++E
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAVE +NGK+ + + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL
Sbjct: 242 EDANKAVEEMNGKEINGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ S
Sbjct: 302 DDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 380 KPLYVAVAQRKEERRARLQAQFSQ 403
KPLYVA+AQRKEER+A L Q+ Q
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQ 384
Score = 228 bits (580), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 174/568 (30%), Positives = 283/568 (49%), Gaps = 69/568 (12%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ +LD ++ + LYD FS G +LS +V D S GY +V++ A +A++
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD--ENGSKGYAFVHFETQEAADKAIEK 157
Query: 91 LNFTPLNNKSIRI-MYSHRDPSIRKSGT-----GNIFIKNLDKSIDHKALHDTFSSFGNI 144
+N LN++ + + + R + G N++IKN + +D ++L + FS FG
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKT 217
Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAI 204
LS K+ D SG+SKGFGFV +E E A A++++NG IN K +FVG +K ER+ +
Sbjct: 218 LSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEINGKVIFVGRAQKKVERQA-EL 276
Query: 205 KTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCF 251
K KF N+++KNLD++ DE L+K F +G+ITSA VM + DG+SK F
Sbjct: 277 KRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGF 335
Query: 252 GFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQG 311
GFV F + ++A KAV +NG+ + YV AQ R++E K + V +
Sbjct: 336 GFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ----RKEERKAHLTNQYMQRVAGMRA 391
Query: 312 L--NLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRAL 369
L N + + + + C+V+ G+ + L
Sbjct: 392 LPANAILNQFQPAAGGYFVPAVPQ---ASKECQVLYASLGLVQ----------------L 432
Query: 370 AEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMG---PSVPPRMPMYPPGPSG 426
+ ++++ +PL ++ +E ++L +R VA G P R+ M G +G
Sbjct: 433 FAIWLQLVMLRPLVASLLPLRESV-SKLA-----LRSVAWGGGRSECPDRLAM-DFGGAG 485
Query: 427 LGQQFLY-----GQAPPAIIPPQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGA 481
QQ L G P + P A P P+ + P P
Sbjct: 486 AAQQGLTDSCQSGGGVPTAVQNLAPRTAVATAAPRAVA----PYKYASSVRSPHPAIQPL 541
Query: 482 GIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEM 541
P+ V P+TA + LA A P++Q+ +LGE L+PL++ + + A K+TGMLLE+
Sbjct: 542 QAPQPAVHVQGQEPLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEI 599
Query: 542 DQTEVLHLLESPEALKAKVAEAMEVLRS 569
D +E+LH+LESPE+L++KV EA+ VL++
Sbjct: 600 DNSELLHMLESPESLRSKVDEAVAVLQA 627
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 109/289 (37%), Positives = 173/289 (59%), Gaps = 16/289 (5%)
Query: 118 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAID 176
++++ +L + L++ FS G +LS ++ D + +S G+ +V F+ A+ A+D
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 177 KLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTIT 236
+N +I K + + +R+ K+ NVF+KNLD+S ++ L F +G I
Sbjct: 71 TMNFDVIKGKPIRI----MWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNIL 126
Query: 237 SAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKG 296
S V+ D +G SK + FV+FE + A KA+E +NG +DR+ +VG+ + + ERE EL
Sbjct: 127 SCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGA 185
Query: 297 QFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGF 356
+ ++ N+YIKN G+ +DDE LKELFS+FG S KVMRDPSG SKG GF
Sbjct: 186 KAKEFT----------NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGF 235
Query: 357 VAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
V++ E+A++A+ EMNGK I K ++V AQ+K ER+A L+ +F Q++
Sbjct: 236 VSYEKHEDANKAVEEMNGKEINGKVIFVGRAQKKVERQAELKRKFEQLK 284
>gi|383417507|gb|AFH31967.1| polyadenylate-binding protein 1 [Macaca mulatta]
gi|383417511|gb|AFH31969.1| polyadenylate-binding protein 1 [Macaca mulatta]
Length = 459
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 229/406 (56%), Positives = 298/406 (73%), Gaps = 4/406 (0%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
S + SLYVGDL +VT++ LY+ FS G +LS+RVCRD+ TRRSLGY YVN+ PA
Sbjct: 4 SAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPA 63
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
DA RALD +NF + K +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FG
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFG 123
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 202
NILSCK+ D +G SKG+GFV FE +E+A+ AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 124 NILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Query: 203 --AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
A +F NV++KN E DE LK +FG++G S VM D GKSK FGFV+FE +
Sbjct: 183 LGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHE 242
Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
DA KAV+ +NGK+ + ++ YVG+AQKK ER+ ELK +FEQ ++ + ++QG+NLY+KNL
Sbjct: 243 DAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLD 302
Query: 321 DSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSK 380
D IDDE+L++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +K
Sbjct: 303 DGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATK 361
Query: 381 PLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSG 426
PLYVA+AQRKEER+A L Q+ Q P P P PSG
Sbjct: 362 PLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSG 407
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 109/298 (36%), Positives = 173/298 (58%), Gaps = 16/298 (5%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFEN 167
+PS ++++ +L + L++ FS G ILS ++ D + +S G+ +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
A+ A+D +N +I K V + +R+ K+ N+F+KNLD+S ++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYD 117
Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
F +G I S V+ D +G SK +GFV+FE + A +A+E +NG +DR+ +VG+ + +
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
ERE EL + ++ N+YIKN G+ +DDE+LK+LF +FG S KVM D
Sbjct: 177 KEREAELGARAKEFT----------NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE 226
Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
SG SKG GFV+F E+A +A+ EMNGK + K +YV AQ+K ER+ L+ +F QM+
Sbjct: 227 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 284
>gi|301790633|ref|XP_002930398.1| PREDICTED: polyadenylate-binding protein 4-like [Ailuropoda
melanoleuca]
Length = 644
Score = 463 bits (1192), Expect = e-127, Method: Compositional matrix adjust.
Identities = 235/425 (55%), Positives = 305/425 (71%), Gaps = 26/425 (6%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+ + + SLYVGDL +VT++ LY+ FS G VLS+ VCRD+ TRRSLGY YVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIWVCRDMITRRSLGYAYVNFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G SKG+ FV FE +E+A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 202 -VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ K K F NV++KN E DE LK++F ++G S VMRD GKSK FGFV++E
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAVE +NGK+ + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL
Sbjct: 242 EDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ S
Sbjct: 302 DDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 380 KPLYVAVAQRKEERRARLQAQF----------------SQMRPVAMG---PSVPP---RM 417
KPLYVA+AQRKEER+A L Q+ +Q +P A G P+VP R
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP 420
Query: 418 PMYPP 422
P Y P
Sbjct: 421 PYYTP 425
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 60/75 (80%), Gaps = 2/75 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A P++Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 553 PLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPE 610
Query: 555 ALKAKVAEAMEVLRS 569
+L++KV EA+ VL++
Sbjct: 611 SLRSKVDEAVAVLQA 625
>gi|118101731|ref|XP_417821.2| PREDICTED: polyadenylate-binding protein 4 [Gallus gallus]
Length = 630
Score = 463 bits (1192), Expect = e-127, Method: Compositional matrix adjust.
Identities = 226/384 (58%), Positives = 293/384 (76%), Gaps = 4/384 (1%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+G+ + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ P
Sbjct: 3 AAGSSYPMASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G SKG+ FV FE +++A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 202 -VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ K K F NV++KN + DE LK++F +YG S VM D GKSK FGFV+FE
Sbjct: 182 ELGAKAKEFTNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDPTGKSKGFGFVSFEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAVE +NGK + + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL
Sbjct: 242 EDANKAVEEMNGKDINGKMVFVGRAQKKVERQAELKRRFEQLKQERISRYQGVNLYIKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ S
Sbjct: 302 DDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 380 KPLYVAVAQRKEERRARLQAQFSQ 403
KPLYVA+AQRKEER+A L Q+ Q
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQ 384
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 108/289 (37%), Positives = 173/289 (59%), Gaps = 16/289 (5%)
Query: 118 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAID 176
++++ +L + L++ FS G +LS ++ D + +S G+ +V F+ A+ A+D
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 177 KLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTIT 236
+N +I K + + +R+ K+ NVF+KNLD+S ++ L F +G I
Sbjct: 71 TMNFDVIKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNIL 126
Query: 237 SAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKG 296
S V+ D +G SK + FV+FE D A +A+E +NG +DR+ +VG+ + + ERE EL
Sbjct: 127 SCKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAELGA 185
Query: 297 QFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGF 356
+ ++ N+YIKN GD +DDE+LKELFS++G S KVM DP+G SKG GF
Sbjct: 186 KAKEFT----------NVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDPTGKSKGFGF 235
Query: 357 VAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
V+F E+A++A+ EMNGK I K ++V AQ+K ER+A L+ +F Q++
Sbjct: 236 VSFEKHEDANKAVEEMNGKDINGKMVFVGRAQKKVERQAELKRRFEQLK 284
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 63/87 (72%), Gaps = 5/87 (5%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 540 PLTA--SMLAAAPPQEQKQMLGERLFPLIQAMHPSLAGKITGMLLEIDNSELLHMLESPE 597
Query: 555 ALKAKVAEAMEVLRSVAQQQANNPADQ 581
+L++KV EA+ VL++ QA A Q
Sbjct: 598 SLRSKVEEAVAVLQA---HQAKKEAAQ 621
>gi|126342190|ref|XP_001379497.1| PREDICTED: polyadenylate-binding protein 1 [Monodelphis domestica]
Length = 669
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 274/639 (42%), Positives = 380/639 (59%), Gaps = 82/639 (12%)
Query: 14 GPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGY 73
G +G + G S T SLYVGDL +VT+S LY+ FS G +LS+RVCRD T+ SLGY
Sbjct: 29 GLSGGSHGHSTPNSPTASLYVGDLHHDVTESMLYEKFSPAGPILSIRVCRDSVTQHSLGY 88
Query: 74 GYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKA 133
YVN+ + A A L +N + IRIM+S RDP RK G GN+F+KNL+KSID+KA
Sbjct: 89 AYVNFQHRAHAEWVLATMNLDVIKGNPIRIMWSQRDPGQRKRGVGNVFVKNLEKSIDNKA 148
Query: 134 LHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHF 193
L+DTFS+FG ILSCK+ +D +G SKG+GFV FE +ESA AI+K+NGML+N+ +VFVG F
Sbjct: 149 LYDTFSTFGRILSCKVISDENG-SKGYGFVHFETQESAGKAIEKMNGMLLNNLKVFVGRF 207
Query: 194 LRKQERET-VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCF 251
++ERE+ + +K K + N+++KN E+ D+ L +IF +YG S VM D G+SK F
Sbjct: 208 KSRRERESELGVKAKDYTNIYIKNFGENMDDQRLTEIFAKYGPTLSVKVMTDDCGRSKGF 267
Query: 252 GFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQG 311
GFV+F++ +DA AV+ +NGK+ + ++ YVG+AQKK ER+ ELK FEQ + ++QG
Sbjct: 268 GFVSFQSHEDAQAAVDDMNGKQLNGKQIYVGRAQKKRERQTELKRHFEQIKQNQHIRYQG 327
Query: 312 LNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAE 371
+NLYIKNL D+I+DE L++ FS FGTITS KVM + +G SKG GFV FS+ ++A++A E
Sbjct: 328 VNLYIKNLDDTINDEHLRKEFSPFGTITSAKVMME-NGRSKGFGFVCFSSSKDAAKASRE 386
Query: 372 MNGKMIVSKPLYVAVAQRKEERRARLQAQF----SQMR----------------PVAMGP 411
MNGK++ SKPLYV++AQRKEERR L+ Q+ + +R P M P
Sbjct: 387 MNGKLVASKPLYVSLAQRKEERRMHLKNQYMYRLAHLRSISNPVFNPYQLANSSPYFMTP 446
Query: 412 SVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPPQMPPRGHAYRYPLGRNMQDFPFD----- 466
S+P + S L Q +P I PP H + N+ F
Sbjct: 447 SLPSQSQAALYNASQLAQ---LRSSPRWISKSIRPPSFHTLTKAICPNIPRATFSPLRST 503
Query: 467 -----MGAGSML---------PVPVDMGAGIP--------RRDASVGQP----------- 493
MGA S + P+P G +P + DA V P
Sbjct: 504 SEIPRMGATSRVANSPAQMLGPLP-GTGTFLPTVPNVPHLKYDAGVDYPEQPFSKSPYIS 562
Query: 494 ----MPITALS-------TALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMD 542
P +S + LA+A P +Q+ +LGE L+P+++ + A K+TGMLLE D
Sbjct: 563 TLARQPAGHISGQESLMPSMLASALPPEQKRILGERLFPIIQGISPTLAGKITGMLLETD 622
Query: 543 QTEVLHLLESPEALKAKVAEAMEVLRS-----VAQQQAN 576
+E+LHLLESPE+L KV EA VL++ V Q++ N
Sbjct: 623 NSEILHLLESPESLHCKVKEAAAVLQTHQAKEVTQKEVN 661
>gi|391332716|ref|XP_003740776.1| PREDICTED: polyadenylate-binding protein 1-like [Metaseiulus
occidentalis]
Length = 660
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 236/432 (54%), Positives = 308/432 (71%), Gaps = 20/432 (4%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
+ G + SLYVGDLD +VT+S L++ F Q G VLS+RVCRD+ +RRSLGY YVN+ P
Sbjct: 3 SGGGNYTMASLYVGDLDPDVTESMLFEKFCQAGPVLSIRVCRDMISRRSLGYAYVNFHQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
DA RALD +NF PL N+ +RIM+S RDPS+RKSG GN+FIKNL K ID+KA+ DTFS+F
Sbjct: 63 GDAERALDTMNFEPLKNRPMRIMWSQRDPSLRKSGVGNVFIKNLHKDIDNKAIFDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERE- 200
GNILSC++ATD G S+G+GFV FE +E+A AI+K+NGML+N+K+VFVG F+ + ERE
Sbjct: 123 GNILSCRVATDEQGNSRGYGFVHFETEEAANEAINKVNGMLLNEKKVFVGKFVPRSERER 182
Query: 201 TVAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ K + F NV+VKN E D LK++F YG ITSA VM D GKS+ FGFV+FEN
Sbjct: 183 MMGDKARLFTNVYVKNFGEELDDGKLKEMFEVYGKITSARVMTDQTGKSRGFGFVSFENP 242
Query: 260 DDAAKAVEALNGKKF-DDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKN 318
D+A +AV+ LN K+ + ++ YVG+AQKK+ER +LK +FEQ E + ++QG+NLY+KN
Sbjct: 243 DNAEQAVKELNDKELGNGKKIYVGRAQKKAERLSDLKRKFEQLKMERMTRYQGVNLYVKN 302
Query: 319 LGDSIDDEKLKELFSEFGTITSCKVMRDPSGI-SKGSGFVAFSTPEEASRALAEMNGKMI 377
L D IDDE+L+ F+ +GTITS KVM D +G SKG GFV FS+PEEA++A+ EMNG++I
Sbjct: 303 LDDVIDDERLRREFAPYGTITSAKVMMDSTGARSKGFGFVCFSSPEEATKAVTEMNGRII 362
Query: 378 VSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVP-PRMPMYPPGPSGLGQQFLYGQA 436
V KPLYVA+AQRKE+RRA L +QF Q G VP +MP P+
Sbjct: 363 VQKPLYVALAQRKEDRRAHLSSQFVQR---FTGVRVPFGQMPFNHSTPTSF--------- 410
Query: 437 PPAIIPPQMPPR 448
I+P M PR
Sbjct: 411 ---IVPASMHPR 419
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 54/75 (72%), Gaps = 2/75 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+T + LA A P Q+ +LGE L+PL+ + D A K+TGMLLE+D +E+LH+LE E
Sbjct: 558 PLT--TQMLAEACPRDQKQMLGERLFPLIYAMHADLAGKITGMLLEIDNSELLHMLEHSE 615
Query: 555 ALKAKVAEAMEVLRS 569
+L+AKV EA+ VL++
Sbjct: 616 SLRAKVEEAVAVLQA 630
>gi|148698436|gb|EDL30383.1| mCG5546, isoform CRA_b [Mus musculus]
Length = 580
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 235/425 (55%), Positives = 305/425 (71%), Gaps = 26/425 (6%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+ + + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ P
Sbjct: 20 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 79
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+F
Sbjct: 80 ADAERALDTMNFDVMKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 139
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G SKG+ FV FE +E+A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 140 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 198
Query: 202 -VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ K K F NV++KN E D +LK++F ++G S VMRD GKSK FGFV++E
Sbjct: 199 ELGAKAKEFTNVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDSSGKSKGFGFVSYEKH 258
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAVE +NGK+ + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL
Sbjct: 259 EDANKAVEEMNGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNL 318
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D+IDDEKL+ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ S
Sbjct: 319 DDTIDDEKLRREFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 377
Query: 380 KPLYVAVAQRKEERRARLQAQF----------------SQMRPVAMG---PSVPP---RM 417
KPLYVA+AQRKEER+A L Q+ +Q +P A G P+VP R
Sbjct: 378 KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPASAILNQFQPAAGGYFVPAVPQAQGRP 437
Query: 418 PMYPP 422
P Y P
Sbjct: 438 PYYTP 442
>gi|119612224|gb|EAW91818.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_d [Homo
sapiens]
Length = 472
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 229/406 (56%), Positives = 298/406 (73%), Gaps = 4/406 (0%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
S + SLYVGDL +VT++ LY+ FS G +LS+RVCRD+ TRRSLGY YVN+ PA
Sbjct: 4 SAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPA 63
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
DA RALD +NF + K +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FG
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFG 123
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 202
NILSCK+ D +G SKG+GFV FE +E+A+ AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 124 NILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Query: 203 --AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
A +F NV++KN E DE LK +FG++G S VM D GKSK FGFV+FE +
Sbjct: 183 LGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHE 242
Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
DA KAV+ +NGK+ + ++ YVG+AQKK ER+ ELK +FEQ ++ + ++QG+NLY+KNL
Sbjct: 243 DAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLD 302
Query: 321 DSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSK 380
D IDDE+L++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +K
Sbjct: 303 DGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATK 361
Query: 381 PLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSG 426
PLYVA+AQRKEER+A L Q+ Q P P P PSG
Sbjct: 362 PLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSG 407
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 109/298 (36%), Positives = 173/298 (58%), Gaps = 16/298 (5%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFEN 167
+PS ++++ +L + L++ FS G ILS ++ D + +S G+ +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
A+ A+D +N +I K V + +R+ K+ N+F+KNLD+S ++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYD 117
Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
F +G I S V+ D +G SK +GFV+FE + A +A+E +NG +DR+ +VG+ + +
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
ERE EL + ++ N+YIKN G+ +DDE+LK+LF +FG S KVM D
Sbjct: 177 KEREAELGARAKEFT----------NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE 226
Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
SG SKG GFV+F E+A +A+ EMNGK + K +YV AQ+K ER+ L+ +F QM+
Sbjct: 227 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 284
>gi|307165845|gb|EFN60208.1| Polyadenylate-binding protein 1 [Camponotus floridanus]
Length = 635
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 224/376 (59%), Positives = 294/376 (78%), Gaps = 4/376 (1%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL ++T++ L++ FS G VLS+RVCRD+ TRRSLGY YVN+ PADA RALD
Sbjct: 12 SLYVGDLHTDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF + + IRIM+S RDPS+RKSG GN+FIKNLDK+ID+KA++DTFS+FGNILSCK+A
Sbjct: 72 MNFDMIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVA 131
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET-VAIKTK-F 208
D SG SKG+GFV FE +E+A +IDK+NGML+N K+V+VG F+ ++ERE + K K F
Sbjct: 132 QDESGASKGYGFVHFETEEAANKSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLF 191
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NV+VKN E TD+ LK++F +YGTITS VM DGKS+ FGFV FE+ D A +AV
Sbjct: 192 TNVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMSKDDGKSRGFGFVAFEDPDAAEQAVLE 251
Query: 269 LNGKKFDD-REWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEK 327
LNGK + + YVG+AQKK+ER+QELK +FEQ E ++++QG+NLY+KNL D+IDDE+
Sbjct: 252 LNGKDISEGKCMYVGRAQKKAERQQELKRKFEQLKIERLNRYQGVNLYVKNLDDTIDDER 311
Query: 328 LKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 387
L++ F+ FGTITS KVM + G SKG GFV FS PEEA++A+ EMNG+++ SKPLYVA+A
Sbjct: 312 LRKEFTPFGTITSAKVMME-EGRSKGFGFVCFSQPEEATKAVTEMNGRIVGSKPLYVALA 370
Query: 388 QRKEERRARLQAQFSQ 403
QRKE+R+A L +Q+ Q
Sbjct: 371 QRKEDRKAHLASQYMQ 386
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 103/289 (35%), Positives = 167/289 (57%), Gaps = 16/289 (5%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDK 177
++++ +L I L + FSS G +LS ++ D + +S G+ +V F+ A+ A+D
Sbjct: 12 SLYVGDLHTDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 178 LNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITS 237
+N +I + + + +R+ K+ NVF+KNLD++ ++ + F +G I S
Sbjct: 72 MNFDMIKGRPIRIMW----SQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILS 127
Query: 238 AVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQ 297
V +D G SK +GFV+FE + A K+++ +NG + ++ YVGK + ERE+EL
Sbjct: 128 CKVAQDESGASKGYGFVHFETEEAANKSIDKVNGMLLNGKKVYVGKFIPRKEREKELG-- 185
Query: 298 FEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFV 357
E F N+Y+KN G+ + D+KLKE+F ++GTITS KVM G S+G GFV
Sbjct: 186 ------EKAKLF--TNVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMSKDDGKSRGFGFV 237
Query: 358 AFSTPEEASRALAEMNGKMIVS-KPLYVAVAQRKEERRARLQAQFSQMR 405
AF P+ A +A+ E+NGK I K +YV AQ+K ER+ L+ +F Q++
Sbjct: 238 AFEDPDAAEQAVLELNGKDISEGKCMYVGRAQKKAERQQELKRKFEQLK 286
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 102/292 (34%), Positives = 167/292 (57%), Gaps = 23/292 (7%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ +LD N+ + +YD FS G +LS +V +D S S GYG+V++ A +++D
Sbjct: 100 NVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDESGA-SKGYGFVHFETEEAANKSIDK 158
Query: 91 LNFTPLNNKSIRI-MYSHRDPSIRKSGT-----GNIFIKNLDKSIDHKALHDTFSSFGNI 144
+N LN K + + + R ++ G N+++KN + + L + F +G I
Sbjct: 159 VNGMLLNGKKVYVGKFIPRKEREKELGEKAKLFTNVYVKNFGEDMTDDKLKEMFEKYGTI 218
Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLIND-KQVFVGHFLRKQERETVA 203
S K+ + G+S+GFGFV FE+ ++A+ A+ +LNG I++ K ++VG +K ER+
Sbjct: 219 TSHKVMSKDDGKSRGFGFVAFEDPDAAEQAVLELNGKDISEGKCMYVGRAQKKAERQQ-E 277
Query: 204 IKTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKC 250
+K KF N++VKNLD++ DE L+K F +GTITSA VM + +G+SK
Sbjct: 278 LKRKFEQLKIERLNRYQGVNLYVKNLDDTIDDERLRKEFTPFGTITSAKVMME-EGRSKG 336
Query: 251 FGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAM 302
FGFV F ++A KAV +NG+ + YV AQ+K +R+ L Q+ Q M
Sbjct: 337 FGFVCFSQPEEATKAVTEMNGRIVGSKPLYVALAQRKEDRKAHLASQYMQRM 388
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 98/195 (50%), Gaps = 29/195 (14%)
Query: 28 LTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARA 87
L T++YV + ++TD +L ++F + G + S +V +S G+G+V + +P A +A
Sbjct: 190 LFTNVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMSK-DDGKSRGFGFVAFEDPDAAEQA 248
Query: 88 LDVLNFTPLNNKSI---RIMYSHRDPS-------------------IRKSGTGNIFIKNL 125
+ LN K I + MY R + + N+++KNL
Sbjct: 249 V-----LELNGKDISEGKCMYVGRAQKKAERQQELKRKFEQLKIERLNRYQGVNLYVKNL 303
Query: 126 DKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLIND 185
D +ID + L F+ FG I S K+ + G+SKGFGFV F E A A+ ++NG ++
Sbjct: 304 DDTIDDERLRKEFTPFGTITSAKVMME-EGRSKGFGFVCFSQPEEATKAVTEMNGRIVGS 362
Query: 186 KQVFVGHFLRKQERE 200
K ++V RK++R+
Sbjct: 363 KPLYVALAQRKEDRK 377
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 60/84 (71%), Gaps = 2/84 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A P++Q+ +LGE L+PL++ + K+TGMLLE+D +E+LH+LE E
Sbjct: 551 PLTA--SMLAAAPPQEQKQMLGERLFPLIQCMYPSLTGKITGMLLEIDNSELLHMLEHNE 608
Query: 555 ALKAKVAEAMEVLRSVAQQQANNP 578
+LKAKV EA+ VL++ +QA P
Sbjct: 609 SLKAKVEEAVAVLQAHQAKQAVAP 632
Score = 46.2 bits (108), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
N++ +LYV +LD + D +L F+ G + S +V + RS G+G+V ++ P +A
Sbjct: 291 NRYQGVNLYVKNLDDTIDDERLRKEFTPFGTITSAKVM--MEEGRSKGFGFVCFSQPEEA 348
Query: 85 ARALDVLNFTPLNNKSIRIMYSHR 108
+A+ +N + +K + + + R
Sbjct: 349 TKAVTEMNGRIVGSKPLYVALAQR 372
>gi|354484923|ref|XP_003504635.1| PREDICTED: polyadenylate-binding protein 1-like [Cricetulus
griseus]
Length = 672
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 275/605 (45%), Positives = 379/605 (62%), Gaps = 71/605 (11%)
Query: 24 GNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPAD 83
G +SLYVGDL +VT++ LY++FS +G +LS+RVCRD++TRRSLGY Y+N+ PAD
Sbjct: 68 GQACALSSLYVGDLHPDVTEAMLYEMFSPIGTILSIRVCRDVATRRSLGYAYINFQQPAD 127
Query: 84 AARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGN 143
A RALD +NF + + IRIM+SHRDP +RKSG GNIFIKNL+ SID+KAL+DTFS+FG+
Sbjct: 128 AERALDTMNFEMIKGQPIRIMWSHRDPGLRKSGMGNIFIKNLENSIDNKALYDTFSTFGS 187
Query: 144 ILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV- 202
ILS K+ + G S+GFGFV FE E+AQ AI+ +NGML+ND++VFVGHF +Q+RE
Sbjct: 188 ILSSKVVYNEHG-SRGFGFVHFETHEAAQKAINTMNGMLLNDRKVFVGHFKSRQKREAEL 246
Query: 203 -AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADD 261
A F NV+VKNL ++ L+ +F ++G + S VMRD +G+S+ FGFVNFE ++
Sbjct: 247 GARALGFTNVYVKNLHMDMDEQGLQDLFSQFGKMQSVKVMRDSNGQSRGFGFVNFEKHEE 306
Query: 262 AAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGD 321
A KAV+ +NGK+ + YVG+AQK++ER+ ELK +FEQ +E +++QG+NLY+KNL D
Sbjct: 307 AQKAVDHMNGKEVRGQLLYVGRAQKRAERQSELKRRFEQVKQERQNRYQGVNLYVKNLDD 366
Query: 322 SIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKP 381
SI+DE+LKE+FS +G ITS KVM + S SKG GFV FS+PEEA++A+ EMNG+++ +KP
Sbjct: 367 SINDERLKEVFSAYGVITSAKVMTESSH-SKGFGFVCFSSPEEATKAVTEMNGRIVGTKP 425
Query: 382 LYVAVAQRKEERRARLQAQFSQM--RPV----------------------------AMGP 411
LYVA+AQRKEER+A L Q+ + RPV +M P
Sbjct: 426 LYVALAQRKEERKAILTNQYRRQLSRPVLSSFQQPTNYLLSAVSQSTAQAVYYGSGSMAP 485
Query: 412 SVP-PRMPMYPPGPSGLGQQFLYGQAPPA--IIPP---QMPPRGH-------AYRYPLGR 458
P PR + P GPS PPA ++ P PR H + + P +
Sbjct: 486 MQPDPRWAVQPHGPSST--------CPPAASVVQPLGTMQHPRVHLNNASQASSQVPHTQ 537
Query: 459 NMQDFPFDM----GAGSMLP----------VPVDMGAGIPRRDASVGQPMPITALSTALA 504
+ + G G +P V G+ V P+T + LA
Sbjct: 538 RVVNIGTQTTGSGGEGCSIPGQPLLTHRGSSAVHSAHGVQEPAVYVPGHQPLTV--SMLA 595
Query: 505 NASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAM 564
A +Q+ ++GE LY L++ K+TGMLLEMD E+L LLESPE+L AK+ EA+
Sbjct: 596 AAPLHEQKQMIGERLYSLIQDTCAPLTGKITGMLLEMDNLELLLLLESPESLHAKIEEAV 655
Query: 565 EVLRS 569
VLR+
Sbjct: 656 AVLRA 660
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 99/298 (33%), Positives = 171/298 (57%), Gaps = 16/298 (5%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATD-GSGQSKGFGFVQFEN 167
DP + ++++ +L + L++ FS G ILS ++ D + +S G+ ++ F+
Sbjct: 65 DPGGQACALSSLYVGDLHPDVTEAMLYEMFSPIGTILSIRVCRDVATRRSLGYAYINFQQ 124
Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
A+ A+D +N +I + + + R+ K+ N+F+KNL+ S ++ L
Sbjct: 125 PADAERALDTMNFEMIKGQPIRI----MWSHRDPGLRKSGMGNIFIKNLENSIDNKALYD 180
Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
F +G+I S+ V+ + G S+ FGFV+FE + A KA+ +NG +DR+ +VG + +
Sbjct: 181 TFSTFGSILSSKVVYNEHG-SRGFGFVHFETHEAAQKAINTMNGMLLNDRKVFVGHFKSR 239
Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
+RE EL +A+ T N+Y+KNL +D++ L++LFS+FG + S KVMRD
Sbjct: 240 QKREAELGA---RALGFT-------NVYVKNLHMDMDEQGLQDLFSQFGKMQSVKVMRDS 289
Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
+G S+G GFV F EEA +A+ MNGK + + LYV AQ++ ER++ L+ +F Q++
Sbjct: 290 NGQSRGFGFVNFEKHEEAQKAVDHMNGKEVRGQLLYVGRAQKRAERQSELKRRFEQVK 347
>gi|380793569|gb|AFE68660.1| polyadenylate-binding protein 4 isoform 3, partial [Macaca mulatta]
Length = 485
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 236/425 (55%), Positives = 306/425 (72%), Gaps = 26/425 (6%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+ + + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G SKG+ FV FE +E+A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 202 -VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ K K F NV++KN E DE LK++F ++G S VMRD GKSK FGFV++E
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAVE +NGK+ + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL
Sbjct: 242 EDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ S
Sbjct: 302 DDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 380 KPLYVAVAQRKEERRARLQAQF----------------SQMRPVAMG---PSVPP---RM 417
KPLYVA+AQRKEER+A L Q+ +Q +P A G P+VP R
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP 420
Query: 418 PMYPP 422
P Y P
Sbjct: 421 PYYTP 425
>gi|166157896|ref|NP_001107551.1| polyadenylate-binding protein 1-like [Mus musculus]
gi|187960776|gb|ACD43645.1| embryonic poly(A)-binding protein [Mus musculus]
Length = 607
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 272/596 (45%), Positives = 375/596 (62%), Gaps = 67/596 (11%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
+SLYVGDL +VT+S LY++FS +G +LS+RVCRD++TRRSLGY Y+N+ PADA RALD
Sbjct: 11 SSLYVGDLHPDVTESMLYEMFSPIGNILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 90 VLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKI 149
+NF + + IRIM+SHRDP +RKSG GNIFIKNL+ SID+KAL+DTFS+FG+ILS K+
Sbjct: 71 TMNFEVIKGQPIRIMWSHRDPGLRKSGMGNIFIKNLENSIDNKALYDTFSTFGSILSSKV 130
Query: 150 ATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTK 207
+ G S+GFGFV FE E+AQ AI+ +NGML+ND++VFVGHF +Q+RE A
Sbjct: 131 VYNEHG-SRGFGFVHFETHEAAQKAINTMNGMLLNDRKVFVGHFKSRQKREAELGARALG 189
Query: 208 FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVE 267
F N++VKNL + ++ L+ +F ++G + S VMRD +G+S+ FGFVNFE ++A KAV+
Sbjct: 190 FTNIYVKNLHANVDEQRLQDLFSQFGNMQSVKVMRDSNGQSRGFGFVNFEKHEEAQKAVD 249
Query: 268 ALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEK 327
+NGK+ + YVG+AQK++ER+ ELK +FEQ +E +++QG+NLY+KNL DSI+DE+
Sbjct: 250 HMNGKEVSGQLLYVGRAQKRAERQSELKRRFEQMKQERQNRYQGVNLYVKNLDDSINDER 309
Query: 328 LKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 387
LKE+FS +G ITS KVM + S SKG GFV FS+PEEA++A+ EMNG+++ +KPLYVA+A
Sbjct: 310 LKEVFSTYGVITSAKVMTESSH-SKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALA 368
Query: 388 QRKEERRARLQAQFSQMRPVAMGPSVP-------PRMPMYPPGPSGLGQQFLYG------ 434
QRKEER+A L Q+ + PS P P + P P Q Y
Sbjct: 369 QRKEERKAILTNQYRRR------PSHPVLSSFQQPTSYLLPAVPQSTAQAVYYSSGSITP 422
Query: 435 -----------QAPPAIIPP-----------QMPP---RGHAY---RYPLGRNMQDFPFD 466
PP+ PP Q P RG + + P + + +
Sbjct: 423 MQPDPRWTAQPHGPPSTCPPAASVVQPLSTTQHPCIHLRGASQVSSQVPHTQRVVNIGTQ 482
Query: 467 M----GAGSMLP----VP------VDMGAGIPRRDASVGQPMPITALSTALANASPEQQR 512
G GS +P VP V G+ V P+T + LA A +Q+
Sbjct: 483 TTGPGGEGSSIPGQLLVPHRGTSAVHSAHGVQESAVYVPGHQPLTV--SMLAAAPLHEQK 540
Query: 513 TLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLR 568
++GE LY L+ K+TGMLLE+D E+L LLESPE+L AK+ EA+ VL+
Sbjct: 541 QMIGERLYSLIHDACAPLTGKITGMLLELDNLELLLLLESPESLHAKIEEAVAVLQ 596
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
N++ +LYV +LD ++ D +L ++FS G + S +V + S S G+G+V +++P +A
Sbjct: 289 NRYQGVNLYVKNLDDSINDERLKEVFSTYGVITSAKVMTESS--HSKGFGFVCFSSPEEA 346
Query: 85 ARALDVLNFTPLNNKSIRIMYSHR 108
+A+ +N + K + + + R
Sbjct: 347 TKAVTEMNGRIVGTKPLYVALAQR 370
>gi|148232824|ref|NP_001080204.1| polyadenylate-binding protein 1-A [Xenopus laevis]
gi|623598|gb|AAA60936.1| poly(A)-binding protein [Xenopus laevis]
Length = 633
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 247/513 (48%), Positives = 331/513 (64%), Gaps = 39/513 (7%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
S + SLYVGDL +VT++ LY+ FS G +LS+RVCRD+ TRRSLGY YVN+ PA
Sbjct: 4 SAPSYPMASLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPA 63
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
DA RALD +NF + + +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FG
Sbjct: 64 DAERALDTMNFDVIKGRPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFG 123
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 202
NILSCK+ D +G SKG+GFV FE +E+A+ AIDK+NGML+ND++VFVG F ++ERE
Sbjct: 124 NILSCKVVCDENG-SKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSRKEREAE 182
Query: 203 --AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
A +F NV++KN + DE LK++FG+YG S VM D +GKSK FGFV+FE +
Sbjct: 183 LGARAKEFTNVYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDDNGKSKGFGFVSFERHE 242
Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
DA KAV+ + GK + + +VG+AQKK ER+ ELK +FEQ ++ + ++QG+NLY+KNL
Sbjct: 243 DAQKAVDEMYGKDMNGKSMFVGRAQKKVERQTELKRKFEQMNQDRITRYQGVNLYVKNLD 302
Query: 321 DSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSK 380
D IDDE+L++ F FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +K
Sbjct: 303 DGIDDERLRKEFLPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATK 361
Query: 381 PLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAI 440
PLYVA+AQRKEER+A L Q+ Q P+ P + Y P PS + PPA
Sbjct: 362 PLYVALAQRKEERQAHLTNQYMQRMASVRVPN--PVINPYQPPPSS----YFMAAIPPA- 414
Query: 441 IPPQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALS 500
+ A YP G+ Q P PR A +P P +
Sbjct: 415 -------QNRAAYYPPGQIAQLRP------------------SPRWTAQGARPHPFQNMP 449
Query: 501 TALANASPEQQRTLLGESLYPLVEQLERDAAAK 533
A+ +P R ++ P Q+ R +A+
Sbjct: 450 GAIRPTAP---RPPTFSTMRPASNQVPRVMSAQ 479
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 103/297 (34%), Positives = 172/297 (57%), Gaps = 16/297 (5%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFEN 167
+PS ++++ +L + + L++ FS G ILS ++ D + +S G+ +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
A+ A+D +N +I + V + +R+ K+ N+F+KNLD+S ++ L
Sbjct: 62 PADAERALDTMNFDVIKGRPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYD 117
Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
F +G I S V+ D +G SK +GFV+FE + A +A++ +NG +DR+ +VG+ + +
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSR 176
Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
ERE EL + ++ N+YIKN GD ++DE+LKE+F ++G S KVM D
Sbjct: 177 KEREAELGARAKEF----------TNVYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDD 226
Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQM 404
+G SKG GFV+F E+A +A+ EM GK + K ++V AQ+K ER+ L+ +F QM
Sbjct: 227 NGKSKGFGFVSFERHEDAQKAVDEMYGKDMNGKSMFVGRAQKKVERQTELKRKFEQM 283
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 61/81 (75%), Gaps = 2/81 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 542 PLTA--SMLAAAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPE 599
Query: 555 ALKAKVAEAMEVLRSVAQQQA 575
+L+ KV EA+ VL++ ++A
Sbjct: 600 SLRLKVDEAVAVLQAHQAKEA 620
>gi|409045875|gb|EKM55355.1| hypothetical protein PHACADRAFT_255926 [Phanerochaete carnosa
HHB-10118-sp]
Length = 672
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 213/398 (53%), Positives = 301/398 (75%), Gaps = 2/398 (0%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVG+LD V+++ L+++F+ +G V S+RVCRD TRRSLGY YVNY N AD RAL
Sbjct: 48 SASLYVGELDPTVSEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERAL 107
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LN++ + ++ RIM+S RDP++RK+G GNIFIKNLD++ID+KALHDTF++FGN+LSCK
Sbjct: 108 EQLNYSLIKGRACRIMWSQRDPALRKTGQGNIFIKNLDEAIDNKALHDTFAAFGNVLSCK 167
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKT 206
+ATD G+SKG+GFV +E E+A+ AI +NGML+NDK+V+VGH + K+ER++ I+
Sbjct: 168 VATDEQGRSKGYGFVHYETAEAAETAIKAVNGMLLNDKKVYVGHHISKKERQSKLDEIRA 227
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
+F N++VKNLD + E+ ++F ++G +TSAV+ D +G SK FGFVNFE ++A AV
Sbjct: 228 QFTNIYVKNLDPEVSLEEFTQLFEQFGNVTSAVIQTDEEGNSKGFGFVNFEFHEEAQNAV 287
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
+ L+ +++ R+ +V +AQKK+ERE+EL+ +E A E + K+QG+NLYIKNL D IDDE
Sbjct: 288 DGLHDTEYNGRKLFVSRAQKKAEREEELRKSYEHAKMEKMSKYQGVNLYIKNLDDEIDDE 347
Query: 327 KLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 386
+L+ F FGTITS KVMRD G SKG GFV FS+P+EA++A+AEMN KMI +KPLYV++
Sbjct: 348 RLRAEFEPFGTITSAKVMRDEKGSSKGFGFVCFSSPDEATKAVAEMNNKMIGAKPLYVSL 407
Query: 387 AQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGP 424
AQR+E RR +L++Q +Q + M + MP Y GP
Sbjct: 408 AQRREVRRQQLESQIAQRNQIRMQQAAAAGMPGYMNGP 445
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 46/69 (66%)
Query: 500 STALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAK 559
++ L N SP +Q+ ++GE +Y + D A K+TGMLLEMD E++ L+ S +AL K
Sbjct: 592 TSTLVNLSPMEQKQMIGEMIYMQIVNQHPDLAGKITGMLLEMDNAELISLVASHDALDGK 651
Query: 560 VAEAMEVLR 568
V+EA+ VL+
Sbjct: 652 VSEALNVLQ 660
Score = 42.7 bits (99), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 50/100 (50%), Gaps = 1/100 (1%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
+++ +LY+ +LD + D +L F G + S +V RD S G+G+V +++P +A
Sbjct: 328 SKYQGVNLYIKNLDDEIDDERLRAEFEPFGTITSAKVMRD-EKGSSKGFGFVCFSSPDEA 386
Query: 85 ARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKN 124
+A+ +N + K + + + R R+ I +N
Sbjct: 387 TKAVAEMNNKMIGAKPLYVSLAQRREVRRQQLESQIAQRN 426
>gi|187956894|gb|AAI58031.1| 1810053B01Rik protein [Mus musculus]
Length = 607
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 270/596 (45%), Positives = 373/596 (62%), Gaps = 67/596 (11%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
+SLYVGDL +VT+S LY++FS +G +LS+RVCRD++TRRSLGY Y+N+ PADA RALD
Sbjct: 11 SSLYVGDLHPDVTESMLYEMFSPIGNILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 90 VLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKI 149
+NF + + IRIM+SHRDP +RKSG GNIFIKNL+ SID+KAL+DTFS+FG+ILS K+
Sbjct: 71 TMNFEVIKGQPIRIMWSHRDPGLRKSGMGNIFIKNLENSIDNKALYDTFSTFGSILSSKV 130
Query: 150 ATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTK 207
+ G S+GFGFV FE E+AQ AI+ +NGML+ND++VFVGHF +Q+RE A
Sbjct: 131 VYNEHG-SRGFGFVHFETHEAAQKAINTMNGMLLNDRKVFVGHFKSRQKREAELGARALG 189
Query: 208 FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVE 267
F N++VKNL + ++ L+ +F ++G + S VMRD +G+S+ FGFVNFE ++A KAV+
Sbjct: 190 FTNIYVKNLHANVDEQRLQDLFSQFGNMQSVKVMRDSNGQSRGFGFVNFEKHEEAQKAVD 249
Query: 268 ALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEK 327
+NGK+ + YVG+AQK++ER+ ELK +FEQ +E +++QG+NLY+KNL DSI+DE+
Sbjct: 250 HMNGKEVSGQLLYVGRAQKRAERQSELKRRFEQMKQERQNRYQGVNLYVKNLDDSINDER 309
Query: 328 LKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 387
LKE+FS +G ITS KVM + S SKG GFV FS+PEEA++A+ EMNG+++ +KPLYVA+A
Sbjct: 310 LKEVFSTYGVITSAKVMTESSH-SKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALA 368
Query: 388 QRKEERRARLQAQFSQMRPVAMGPSVP-------PRMPMYPPGPSGLGQQFLYG------ 434
QRKEER+A L Q+ + PS P P + P P Q Y
Sbjct: 369 QRKEERKAILTNQYRRR------PSHPVLSSFQQPTSYLLPAVPQSTAQAVYYSSGSITP 422
Query: 435 -----------QAPPAIIPP----------QMPPRGH-------AYRYPLGRNMQDFPFD 466
PP+ PP P H + + P + + +
Sbjct: 423 MQPDPRWTAQPHGPPSTCPPAASVVQPLSTTQHPCIHLSGASQVSSQVPHTQRVVNIGTQ 482
Query: 467 M----GAGSMLP----VP------VDMGAGIPRRDASVGQPMPITALSTALANASPEQQR 512
G GS +P VP V G+ V P+T + LA A +Q+
Sbjct: 483 TTGPGGEGSSIPGQLLVPHRGTSAVHSAHGVQESAVYVPGHQPLTV--SMLAAAPLHEQK 540
Query: 513 TLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLR 568
++GE LY L+ K+TGMLLE+D E+L LLESPE+L AK+ EA+ VL+
Sbjct: 541 QMIGERLYSLIHDACAPLTGKITGMLLELDNLELLLLLESPESLHAKIEEAVAVLQ 596
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
N++ +LYV +LD ++ D +L ++FS G + S +V + S S G+G+V +++P +A
Sbjct: 289 NRYQGVNLYVKNLDDSINDERLKEVFSTYGVITSAKVMTESS--HSKGFGFVCFSSPEEA 346
Query: 85 ARALDVLNFTPLNNKSIRIMYSHR 108
+A+ +N + K + + + R
Sbjct: 347 TKAVTEMNGRIVGTKPLYVALAQR 370
>gi|410910966|ref|XP_003968961.1| PREDICTED: polyadenylate-binding protein 1-like [Takifugu rubripes]
Length = 635
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 224/406 (55%), Positives = 296/406 (72%), Gaps = 4/406 (0%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
S + SLYVGDL +VT++ LY+ FS G +LS+RVCRD+ TRRSLGY YVN+ PA
Sbjct: 4 SAASYPMASLYVGDLHTDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQPA 63
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
DA RALD +NF + + +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FG
Sbjct: 64 DAERALDTMNFDVIKGRPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFG 123
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 202
NILSCK+ D +G SKG+GFV FE +E+A+ AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 124 NILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Query: 203 --AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
A +F NV++KN + +E L+ +F +YG S VM D GKS+ FGFV+FE +
Sbjct: 183 LGARAREFTNVYIKNFGDDMDEEKLRDVFNKYGNAMSIRVMTDDSGKSRGFGFVSFERHE 242
Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
DA KAV+ +NGK+ + + YVG+AQKK ER+ ELK +FEQ ++ + ++QG+NLY+KNL
Sbjct: 243 DAQKAVDEMNGKEMNGKPIYVGRAQKKVERQAELKRKFEQMKQDRMTRYQGVNLYVKNLD 302
Query: 321 DSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSK 380
D IDDE+L++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +K
Sbjct: 303 DGIDDERLRKEFSPFGTITSAKVMLE-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATK 361
Query: 381 PLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSG 426
PLYVA+AQRKEER+A L Q+ Q P P P PSG
Sbjct: 362 PLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSG 407
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 106/298 (35%), Positives = 175/298 (58%), Gaps = 16/298 (5%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFEN 167
+PS ++++ +L + L++ FS G ILS ++ D + +S G+ +V F+
Sbjct: 2 NPSAASYPMASLYVGDLHTDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
A+ A+D +N +I + V + +R+ K+ N+F+KNLD+S ++ L
Sbjct: 62 PADAERALDTMNFDVIKGRPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYD 117
Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
F +G I S V+ D +G SK +GFV+FE + A +A+E +NG +DR+ +VG+ + +
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
ERE EL + + N+YIKN GD +D+EKL+++F+++G S +VM D
Sbjct: 177 KEREAELGARAREF----------TNVYIKNFGDDMDEEKLRDVFNKYGNAMSIRVMTDD 226
Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
SG S+G GFV+F E+A +A+ EMNGK + KP+YV AQ+K ER+A L+ +F QM+
Sbjct: 227 SGKSRGFGFVSFERHEDAQKAVDEMNGKEMNGKPIYVGRAQKKVERQAELKRKFEQMK 284
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 61/90 (67%), Gaps = 7/90 (7%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+T +T LA A +Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 543 PLT--TTMLAAAPLHEQKQMLGERLFPLIQAMHLSLAGKITGMLLEIDNSELLHMLESPE 600
Query: 555 ALKAKVAEAMEVL-----RSVAQQQANNPA 579
+L++KV EA+ VL + AQ+ N A
Sbjct: 601 SLRSKVDEAVAVLQAHQAKEAAQKSVTNSA 630
>gi|126342235|ref|XP_001367420.1| PREDICTED: polyadenylate-binding protein 1-like [Monodelphis
domestica]
Length = 635
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 241/457 (52%), Positives = 321/457 (70%), Gaps = 11/457 (2%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
S + T SLYVGDL V+++ LY+ FS G +LS+RVCRD+ TRRSLGY YVN+ PA
Sbjct: 4 SAPSYPTASLYVGDLHPEVSEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPA 63
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
DA RAL+ +NF + K +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL DTFS+FG
Sbjct: 64 DAERALETMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALFDTFSAFG 123
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 202
NILSCK+ D G SKG+GFV FE +++A+ AIDK+NGML+ND++VFVG F ++ERE
Sbjct: 124 NILSCKVVCDEHG-SKGYGFVHFETRDAAERAIDKMNGMLLNDRKVFVGRFKSRKEREAE 182
Query: 203 --AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
A +F NV++KN E D LK++FG++G S VM D G SK FGFVNFE +
Sbjct: 183 LGARAKEFTNVYIKNFGEDMDDLRLKRLFGKFGPSLSVKVMTDESGTSKGFGFVNFERHE 242
Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
DA KAVE +NGK+ + ++ YVG+AQKK ER+ ELK +FEQ ++ + ++QG+NLY+KNL
Sbjct: 243 DAQKAVEEMNGKELNGKKIYVGRAQKKGERQTELKRKFEQLKQDRITRYQGVNLYVKNLD 302
Query: 321 DSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSK 380
D IDDE+L++ FS FGTITS KVM + G +KG GFV FS+PEEA++A+ EMNG+++ +K
Sbjct: 303 DGIDDERLRKEFSPFGTITSAKVMME-GGRNKGFGFVCFSSPEEATKAVTEMNGRIVATK 361
Query: 381 PLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVP-PRMPMYPPGPSGLGQQFL-YGQAPP 438
PLY+A+AQRKEER+A L Q+ M+ +A +VP P + Y P PSG + Q P
Sbjct: 362 PLYIALAQRKEERQAHLTNQY--MQRMASIRAVPNPVLNPYQP-PSGYFMTAIPQTQNRP 418
Query: 439 AIIPP-QMPPRGHAYRYPLGRNMQDFPFDMGAGSMLP 474
A P QM P + R+ + + PF G++ P
Sbjct: 419 AYYPASQMAPLRPSPRW-TSQGARPHPFQNLPGAIRP 454
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 64/91 (70%), Gaps = 7/91 (7%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 543 PLTA--SMLAAAPPQEQKQMLGERLFPLIQAMHPSLAGKITGMLLEIDNSELLHMLESPE 600
Query: 555 ALKAKVAEAMEVL-----RSVAQQQANNPAD 580
+L++KV EA+ VL + AQ+ N AD
Sbjct: 601 SLRSKVDEAVAVLQAHQAKEAAQKAVKNAAD 631
>gi|119596296|gb|EAW75890.1| hCG2019100, isoform CRA_d [Homo sapiens]
Length = 639
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 232/436 (53%), Positives = 308/436 (70%), Gaps = 13/436 (2%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
ASG+ + SLYVGDL +VT++ LY+ FS G +LS+RVCRD++TRRSLGY Y+N+ P
Sbjct: 3 ASGSGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF L + IRIM+S RDP +RKSG GNIFIKNL+ SID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+A D G S+GFGFV FE E+AQ AI+ +NGML+ND++VFVGHF ++ERE
Sbjct: 123 GNILSCKVACDEHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRREREA 181
Query: 202 V--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
A +F N++VKNL ++ L+ +F ++G + S VMRD G S+CFGFVNFE
Sbjct: 182 ELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
++A KAV +NGK+ R Y G+AQK+ ER+ ELK +FEQ ++ + ++QG+NLY+KNL
Sbjct: 242 EEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
DSIDD+KL++ FS +G ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +
Sbjct: 302 DDSIDDDKLRKEFSPYGVITSAKVMTE-GGHSKGFGFVCFSSPEEATKAVTEMNGRIVGT 360
Query: 380 KPLYVAVAQRKEERRARLQAQFSQ----MRPVA---MGPSVPPRMPMYPPGPSGLGQQFL 432
KPLYVA+AQRKEER+A L Q+ Q MR ++ +G P P P Q
Sbjct: 361 KPLYVALAQRKEERKAILTNQYMQRLSTMRTLSNPLLGSFQQPSSYFLPAMPQPPAQAAY 420
Query: 433 YGQAPPAIIPPQMPPR 448
YG P + P Q PR
Sbjct: 421 YGCGP--VTPTQPAPR 434
>gi|344236474|gb|EGV92577.1| Polyadenylate-binding protein 4 [Cricetulus griseus]
Length = 524
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 235/416 (56%), Positives = 303/416 (72%), Gaps = 26/416 (6%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ PADA RALD
Sbjct: 3 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 62
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+FGNILSCK+
Sbjct: 63 MNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVV 122
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET-VAIKTK-F 208
D +G SKG+ FV FE +E+A AI+K+NGML+ND++VFVG F ++ERE + K K F
Sbjct: 123 CDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEF 181
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NV++KN E D++LK++F ++G S VMRD GKSK FGFV++E +DA KAVE
Sbjct: 182 TNVYIKNFGEEVDDDNLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEE 241
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
+NGK+ + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL D+IDDEKL
Sbjct: 242 MNGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKL 301
Query: 329 KELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ SKPLYVA+AQ
Sbjct: 302 RKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 360
Query: 389 RKEERRARLQAQF----------------SQMRPVAMG---PSVPP---RMPMYPP 422
RKEER+A L Q+ SQ +P A G P+VP R P Y P
Sbjct: 361 RKEERKAHLTNQYMQRVAGMRALPANAILSQFQPAAGGYFVPAVPQAQGRPPYYTP 416
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 108/196 (55%), Gaps = 20/196 (10%)
Query: 21 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYAN 80
GA +F T++Y+ + V D L +LFSQ G+ LSV+V RD S +S G+G+V+Y
Sbjct: 175 GAKAKEF--TNVYIKNFGEEVDDDNLKELFSQFGKTLSVKVMRDPSG-KSKGFGFVSYEK 231
Query: 81 PADAARALDVLNFTPLNNKSI----------------RIMYSHRDPSIRKSGTGNIFIKN 124
DA +A++ +N ++ K+I R + I + N++IKN
Sbjct: 232 HEDANKAVEEMNGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN 291
Query: 125 LDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLIN 184
LD +ID + L FS FG+I S K+ + G+SKGFGFV F + E A A+ ++NG ++
Sbjct: 292 LDDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVG 350
Query: 185 DKQVFVGHFLRKQERE 200
K ++V RK+ER+
Sbjct: 351 SKPLYVALAQRKEERK 366
>gi|449547299|gb|EMD38267.1| hypothetical protein CERSUDRAFT_113433 [Ceriporiopsis subvermispora
B]
Length = 679
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 225/447 (50%), Positives = 314/447 (70%), Gaps = 41/447 (9%)
Query: 32 LYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVL 91
LYVG+LD VT++ L+++F+ +G V S+RVCRD TRRSLGY YVNY N AD RAL+ L
Sbjct: 50 LYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALEQL 109
Query: 92 NFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIAT 151
N++ + ++ RIM+S RDP++RK+G GNIFIKNLD+ ID+KALHDTF++FGN+LSCK+AT
Sbjct: 110 NYSLIKGRACRIMWSQRDPALRKTGQGNIFIKNLDEGIDNKALHDTFAAFGNVLSCKVAT 169
Query: 152 DGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTKFN 209
D G+SKG+GFV +E E+A AI +NGML+NDK+V+VG + ++ER++ +K +F
Sbjct: 170 DEHGRSKGYGFVHYETAEAADTAIKAVNGMLLNDKKVYVGPHISRKERQSKIEEMKAQFT 229
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEAL 269
NV+VKN+D TDE+ +++F ++G +TSAV+ RD +G+SK FGFVNFE ++A K VE+L
Sbjct: 230 NVYVKNIDAEVTDEEFRQLFEQFGNVTSAVIQRDEEGRSKGFGFVNFEKHEEAQKGVESL 289
Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLK 329
+ + + ++ +V +AQKK+ERE+EL+ +EQA E + K+QG+NLYIKNL D +DDE+L+
Sbjct: 290 HDFELNGKKLFVTRAQKKAEREEELRKSYEQAKNEKLSKYQGVNLYIKNLEDEVDDERLR 349
Query: 330 ELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQR 389
+ F FGTITS KVMRD G SKG GFV FS+P+EA++A+AEMN KMI +KPLYV++AQR
Sbjct: 350 QEFEPFGTITSAKVMRDEKGSSKGFGFVCFSSPDEATKAVAEMNNKMIGTKPLYVSLAQR 409
Query: 390 KEERRARLQAQFSQMRPVAM-----------GP-------------------------SV 413
+E RR +L++Q +Q + M GP +
Sbjct: 410 REVRRQQLESQIAQRNQIRMQQAAVAGGYINGPLYYPPGPGGFPPQGGRGMMGYGQPGML 469
Query: 414 PPRMPMYPPGPS--GLGQQFLYGQAPP 438
PPR P YPP G+ YGQAPP
Sbjct: 470 PPR-PRYPPNGQVPGMPIPAPYGQAPP 495
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 56/77 (72%)
Query: 500 STALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAK 559
S+A+ANASP +Q+ +LGE LY + + + A K+TGMLLE+D E++ LLESP++L AK
Sbjct: 600 SSAMANASPMEQKQMLGEILYMKIAPSQPELAGKITGMLLEIDNAELIILLESPDSLNAK 659
Query: 560 VAEAMEVLRSVAQQQAN 576
V EA+ VL +Q++ +
Sbjct: 660 VQEALAVLHDFSQKETD 676
>gi|224081795|ref|XP_002196994.1| PREDICTED: polyadenylate-binding protein 4 [Taeniopygia guttata]
Length = 629
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 223/383 (58%), Positives = 293/383 (76%), Gaps = 4/383 (1%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
+ + + SLYVGDL ++T++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ PA
Sbjct: 4 AASSYPMASLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPA 63
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
DA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+FG
Sbjct: 64 DAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET- 201
NILSCK+ D +G SKG+ FV FE +++A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 124 NILSCKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Query: 202 VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
+ K K F NV++KN + DE LK++FG+YG S VM D GKSK FGFV+FE +
Sbjct: 183 LGAKAKEFTNVYIKNFGDDMDDERLKELFGKYGKTLSVKVMTDPTGKSKGFGFVSFEKHE 242
Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
+A KAVE +NGK + + +VG+AQKK+ER+ ELK +FEQ +E + ++QG+NLYIKNL
Sbjct: 243 EANKAVEEMNGKDINGKMLFVGRAQKKAERQAELKRRFEQLKQERLSRYQGVNLYIKNLD 302
Query: 321 DSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSK 380
D+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ SK
Sbjct: 303 DTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSK 361
Query: 381 PLYVAVAQRKEERRARLQAQFSQ 403
PLYVA+AQRKEER+A L Q+ Q
Sbjct: 362 PLYVALAQRKEERKAHLTNQYMQ 384
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 110/289 (38%), Positives = 172/289 (59%), Gaps = 16/289 (5%)
Query: 118 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAID 176
++++ +L I L++ FS G +LS ++ D + +S G+ +V F+ A+ A+D
Sbjct: 11 ASLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 177 KLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTIT 236
+N +I K + + +R+ K+ NVF+KNLD+S ++ L F +G I
Sbjct: 71 TMNFDVIKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNIL 126
Query: 237 SAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKG 296
S V+ D +G SK + FV+FE D A +A+E +NG +DR+ +VG+ + + ERE EL
Sbjct: 127 SCKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAELGA 185
Query: 297 QFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGF 356
+ ++ N+YIKN GD +DDE+LKELF ++G S KVM DP+G SKG GF
Sbjct: 186 KAKEFT----------NVYIKNFGDDMDDERLKELFGKYGKTLSVKVMTDPTGKSKGFGF 235
Query: 357 VAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
V+F EEA++A+ EMNGK I K L+V AQ+K ER+A L+ +F Q++
Sbjct: 236 VSFEKHEEANKAVEEMNGKDINGKMLFVGRAQKKAERQAELKRRFEQLK 284
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 100/201 (49%), Gaps = 18/201 (8%)
Query: 201 TVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENA 259
T A +++V +L T+ L + F G + S V RD +S + +VNF+
Sbjct: 3 TAASSYPMASLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
DA +A++ +N + + +Q+ + G N++IKNL
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVG----------------NVFIKNL 106
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
SID++ L + FS FG I SCKV+ D +G SKG FV F T + A RA+ +MNG ++
Sbjct: 107 DKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGMLLND 165
Query: 380 KPLYVAVAQRKEERRARLQAQ 400
+ ++V + ++ER A L A+
Sbjct: 166 RKVFVGRFKSRKEREAELGAK 186
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 63/87 (72%), Gaps = 5/87 (5%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 539 PLTA--SMLAAAPPQEQKQMLGERLFPLIQAMHPSLAGKITGMLLEIDNSELLHMLESPE 596
Query: 555 ALKAKVAEAMEVLRSVAQQQANNPADQ 581
+L++KV EA+ VL++ QA A Q
Sbjct: 597 SLRSKVEEAVAVLQA---HQAKKEAAQ 620
>gi|260944998|ref|XP_002616797.1| hypothetical protein CLUG_04038 [Clavispora lusitaniae ATCC 42720]
gi|238850446|gb|EEQ39910.1| hypothetical protein CLUG_04038 [Clavispora lusitaniae ATCC 42720]
Length = 620
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 262/576 (45%), Positives = 361/576 (62%), Gaps = 36/576 (6%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVG+L+ +V ++ LY++FS +GQV S+RVCRD T++SLGY YVNY D RAL
Sbjct: 50 SASLYVGELNPSVNEAVLYEIFSPLGQVSSIRVCRDAVTKKSLGYAYVNYHKHEDGERAL 109
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LN++ ++ + RIM+S RDPS+R++G GNIFIKNL ID+KALHDTFS+FG ILSCK
Sbjct: 110 EQLNYSLIDGRPCRIMWSQRDPSLRRNGDGNIFIKNLHPDIDNKALHDTFSAFGRILSCK 169
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER--ETVAIKT 206
+ATD G+SK FGFV +E E+A AI+ +NGM +ND++VFVG + K++R + +K
Sbjct: 170 VATDEHGRSKCFGFVHYETAEAADAAIENVNGMSLNDREVFVGKHISKKDRVAKFEEMKA 229
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
F NVFVKN T+ +L +F YG ITS +D +GKSK FGF+NFEN D A KAV
Sbjct: 230 NFTNVFVKNFGSDFTEAELAAMFEPYGKITSLYFEKDSEGKSKGFGFINFENHDAAVKAV 289
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
E LN K+ + ++ YVG+AQKK ER +ELK Q+E E + K+QG+NL++KNL DS+ E
Sbjct: 290 EELNDKEVNGQKIYVGRAQKKRERIEELKKQYETTRLEKLSKYQGVNLFVKNLDDSLTSE 349
Query: 327 KLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 386
L+E F FGTITS KVM D +G SKG GFV FS PEEA++A+ EMN +M++ KPLYVA+
Sbjct: 350 MLEEEFKPFGTITSAKVMVDETGKSKGFGFVCFSAPEEATKAITEMNQRMVLGKPLYVAL 409
Query: 387 AQRKEERRARLQAQFSQMRPVAM---------GPSVPP----RMPMYPPGPSGLGQQFLY 433
AQRK+ RR++L+ Q + M G +PP + P + PG +G
Sbjct: 410 AQRKDVRRSQLEQQIQARNQMRMQNAAAAGIPGQFMPPMFYGQQPGFFPG-NGRNNGPFP 468
Query: 434 GQAPPAIIPP-QM-PPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASV- 490
G P ++P QM PP+G R G N Q P M PV D R+
Sbjct: 469 GPNPQMMMPRGQMPPPQGQWPR--AGPNGQPVP----VYGMPPVYNDFNGPNGRQQRGYF 522
Query: 491 ----GQPMPITALSTALANASPEQQRTLLGESLYPLV----EQLERDAAAKVTGMLLEMD 542
Q L+ +A+A P+QQ+ +LGE LYP + + E +AA K+TGM+L++D
Sbjct: 523 PNNRNQKGGRRDLAAIIASAPPDQQKRILGEELYPKIVSTGKAQEPEAAGKITGMMLDLD 582
Query: 543 QTEVLHLLESPEALKAKVAEAM---EVLRSVAQQQA 575
E+L LLE E +A+ E + +++QA
Sbjct: 583 NQEILALLEDDELFNNHFEDALTAYEEYKKSSEEQA 618
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
+++ +L+V +LD ++T L + F G + S +V D T +S G+G+V ++ P +A
Sbjct: 330 SKYQGVNLFVKNLDDSLTSEMLEEEFKPFGTITSAKVMVD-ETGKSKGFGFVCFSAPEEA 388
Query: 85 ARALDVLNFTPLNNKSIRIMYSHRDPSIRKS 115
+A+ +N + K + + + R +R+S
Sbjct: 389 TKAITEMNQRMVLGKPLYVALAQRK-DVRRS 418
>gi|348513239|ref|XP_003444150.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1
[Oreochromis niloticus]
Length = 634
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 219/383 (57%), Positives = 292/383 (76%), Gaps = 4/383 (1%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
S + SLYVGDL +VT++ LY+ FS G +LS+RVCRD+ TRRSLGY YVN+ PA
Sbjct: 4 SAPSYPMASLYVGDLHQDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQPA 63
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
DA RALD +NF + + +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FG
Sbjct: 64 DAERALDTMNFDVIKGQPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFG 123
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 202
NILSCK+ D +G SKG+GFV FE +E+A+ AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 124 NILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Query: 203 --AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
A +F NV++KN + DE L+++F +YG S VM D +GKS+ FGFV+FE +
Sbjct: 183 LGARAKEFTNVYIKNFGDEMDDEKLRELFSKYGNAMSIRVMTDENGKSRGFGFVSFERHE 242
Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
DA KAV+ +NGK+ + + YVG+AQKK ER+ ELK +FEQ ++ + ++QG+NLY+KNL
Sbjct: 243 DAQKAVDEMNGKEMNGKLMYVGRAQKKVERQTELKRKFEQMKQDRMTRYQGVNLYVKNLD 302
Query: 321 DSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSK 380
D IDDE+L++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +K
Sbjct: 303 DGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATK 361
Query: 381 PLYVAVAQRKEERRARLQAQFSQ 403
PLYVA+AQRKEER+A L Q+ Q
Sbjct: 362 PLYVALAQRKEERQAHLTNQYMQ 384
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 107/298 (35%), Positives = 175/298 (58%), Gaps = 16/298 (5%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFEN 167
+PS ++++ +L + + L++ FS G ILS ++ D + +S G+ +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHQDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
A+ A+D +N +I + V + +R+ K+ N+F+KNLD+S ++ L
Sbjct: 62 PADAERALDTMNFDVIKGQPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYD 117
Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
F +G I S V+ D +G SK +GFV+FE + A +A+E +NG +DR+ +VG+ + +
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
ERE EL + ++ N+YIKN GD +DDEKL+ELFS++G S +VM D
Sbjct: 177 KEREAELGARAKEF----------TNVYIKNFGDEMDDEKLRELFSKYGNAMSIRVMTDE 226
Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
+G S+G GFV+F E+A +A+ EMNGK + K +YV AQ+K ER+ L+ +F QM+
Sbjct: 227 NGKSRGFGFVSFERHEDAQKAVDEMNGKEMNGKLMYVGRAQKKVERQTELKRKFEQMK 284
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 542 PLTA--SMLAAAPPQEQKQMLGERLFPLIQNMHPSLAGKITGMLLEIDNSELLHMLESPE 599
Query: 555 ALKAKVAEAMEVLRSVAQQQA 575
+L++KV EA+ VL++ ++A
Sbjct: 600 SLRSKVDEAVAVLQAHQAKEA 620
>gi|242025596|ref|XP_002433210.1| Polyadenylate-binding protein, putative [Pediculus humanus
corporis]
gi|212518751|gb|EEB20472.1| Polyadenylate-binding protein, putative [Pediculus humanus
corporis]
Length = 637
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 224/383 (58%), Positives = 297/383 (77%), Gaps = 4/383 (1%)
Query: 24 GNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPAD 83
G + SLYVGDL +VT++ L++ FS G VLS+RVCRD+ T+RSLGY YVN+ PAD
Sbjct: 5 GPNYPMASLYVGDLHSDVTEAMLFEKFSSAGPVLSIRVCRDMITKRSLGYAYVNFQQPAD 64
Query: 84 AARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGN 143
A RALD +N+ PL K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KA++DTFS+FGN
Sbjct: 65 AERALDTMNYDPLKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSTFGN 124
Query: 144 ILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET-V 202
ILSCK+A D SG SKG+GFV FE +E+A +IDK+NGML+N K+VFVG F+ ++ERE +
Sbjct: 125 ILSCKVAQDESGTSKGYGFVHFETEEAANKSIDKVNGMLLNGKRVFVGKFIPRKEREKEL 184
Query: 203 AIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADD 261
K K F NV+VKN E +D+ L+++F +YG ITS VM DGKSK FGFV FE+ +
Sbjct: 185 GEKAKRFTNVYVKNFGEDFSDDLLREMFEKYGRITSHKVMSKDDGKSKGFGFVAFEDPEA 244
Query: 262 AAKAVEALNGKKF-DDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
A KAV +LNGK+ + + +VG+AQKK+ER+QELK +FEQ E + ++QG+NLY+KN+
Sbjct: 245 AEKAVASLNGKEIVEGKPLFVGRAQKKAERQQELKRKFEQLKMERLSRYQGVNLYVKNID 304
Query: 321 DSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSK 380
D+IDDE+L++ F+ FGTITS KVM + G SKG GFV FS+ EEA++A+ EMNG+++ SK
Sbjct: 305 DNIDDERLRKEFTPFGTITSAKVMLE-DGRSKGFGFVCFSSAEEATKAVTEMNGRIVGSK 363
Query: 381 PLYVAVAQRKEERRARLQAQFSQ 403
PLYVA+AQRKE+R+A L +Q+ Q
Sbjct: 364 PLYVALAQRKEDRKAHLASQYMQ 386
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 104/290 (35%), Positives = 167/290 (57%), Gaps = 16/290 (5%)
Query: 118 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAID 176
++++ +L + L + FSS G +LS ++ D + +S G+ +V F+ A+ A+D
Sbjct: 11 ASLYVGDLHSDVTEAMLFEKFSSAGPVLSIRVCRDMITKRSLGYAYVNFQQPADAERALD 70
Query: 177 KLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTIT 236
+N + K + + +R+ K+ NVF+KNLD+S ++ + F +G I
Sbjct: 71 TMNYDPLKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSTFGNIL 126
Query: 237 SAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKG 296
S V +D G SK +GFV+FE + A K+++ +NG + + +VGK + ERE+EL
Sbjct: 127 SCKVAQDESGTSKGYGFVHFETEEAANKSIDKVNGMLLNGKRVFVGKFIPRKEREKELG- 185
Query: 297 QFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGF 356
E+A + T N+Y+KN G+ D+ L+E+F ++G ITS KVM G SKG GF
Sbjct: 186 --EKAKRFT-------NVYVKNFGEDFSDDLLREMFEKYGRITSHKVMSKDDGKSKGFGF 236
Query: 357 VAFSTPEEASRALAEMNGKMIVS-KPLYVAVAQRKEERRARLQAQFSQMR 405
VAF PE A +A+A +NGK IV KPL+V AQ+K ER+ L+ +F Q++
Sbjct: 237 VAFEDPEAAEKAVASLNGKEIVEGKPLFVGRAQKKAERQQELKRKFEQLK 286
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 104/292 (35%), Positives = 166/292 (56%), Gaps = 23/292 (7%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ +LD ++ + +YD FS G +LS +V +D S S GYG+V++ A +++D
Sbjct: 100 NVFIKNLDKSIDNKAMYDTFSTFGNILSCKVAQDESGT-SKGYGFVHFETEEAANKSIDK 158
Query: 91 LNFTPLNNKSIRI-MYSHRDPSIRKSGT-----GNIFIKNLDKSIDHKALHDTFSSFGNI 144
+N LN K + + + R ++ G N+++KN + L + F +G I
Sbjct: 159 VNGMLLNGKRVFVGKFIPRKEREKELGEKAKRFTNVYVKNFGEDFSDDLLREMFEKYGRI 218
Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGM-LINDKQVFVGHFLRKQERETVA 203
S K+ + G+SKGFGFV FE+ E+A+ A+ LNG ++ K +FVG +K ER+
Sbjct: 219 TSHKVMSKDDGKSKGFGFVAFEDPEAAEKAVASLNGKEIVEGKPLFVGRAQKKAERQQ-E 277
Query: 204 IKTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKC 250
+K KF N++VKN+D++ DE L+K F +GTITSA VM + DG+SK
Sbjct: 278 LKRKFEQLKMERLSRYQGVNLYVKNIDDNIDDERLRKEFTPFGTITSAKVMLE-DGRSKG 336
Query: 251 FGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAM 302
FGFV F +A++A KAV +NG+ + YV AQ+K +R+ L Q+ Q M
Sbjct: 337 FGFVCFSSAEEATKAVTEMNGRIVGSKPLYVALAQRKEDRKAHLASQYMQKM 388
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 59/81 (72%), Gaps = 2/81 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+T +T LA+A ++Q+ +LGE L+PL+ + A K+TGMLLE+D +E+LH+LE E
Sbjct: 545 PLT--TTMLADAPLQEQKQMLGERLFPLISAMYSKLAGKITGMLLEIDNSELLHMLEHRE 602
Query: 555 ALKAKVAEAMEVLRSVAQQQA 575
+LK+KV EA+ VL++ +QA
Sbjct: 603 SLKSKVEEAVAVLQAHEAKQA 623
>gi|149608633|ref|XP_001515603.1| PREDICTED: polyadenylate-binding protein 4 [Ornithorhynchus
anatinus]
Length = 630
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 223/383 (58%), Positives = 291/383 (75%), Gaps = 4/383 (1%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
+ + + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ PA
Sbjct: 4 TASSYPMASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPA 63
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
DA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+FG
Sbjct: 64 DAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET- 201
NILSCK+ D +G SKG+ FV FE +++A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 124 NILSCKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Query: 202 VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
+ K K F NV++KN + DE LK++F +YG S VM D GKSK FGFV+FE +
Sbjct: 183 LGAKAKEFTNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDPSGKSKGFGFVSFEKHE 242
Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
DA +AVE +NGK + + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL
Sbjct: 243 DANQAVEDMNGKDINGKMVFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLD 302
Query: 321 DSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSK 380
D+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ SK
Sbjct: 303 DTIDDEKLRKEFSPFGSITSAKVMLE-EGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSK 361
Query: 381 PLYVAVAQRKEERRARLQAQFSQ 403
PLYVA+AQRKEER+A L Q+ Q
Sbjct: 362 PLYVALAQRKEERKAHLTNQYMQ 384
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 179/562 (31%), Positives = 280/562 (49%), Gaps = 72/562 (12%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ +LD ++ + LYD FS G +LS +V D + S GY +V++ A RA++
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYAFVHFETQDAADRAIEK 157
Query: 91 LNFTPLNNKSIRI-MYSHRDPSIRKSGT-----GNIFIKNLDKSIDHKALHDTFSSFGNI 144
+N LN++ + + + R + G N++IKN +D + L + FS +G
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMDDERLKELFSKYGKT 217
Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAI 204
LS K+ TD SG+SKGFGFV FE E A A++ +NG IN K VFVG +K ER+ +
Sbjct: 218 LSVKVMTDPSGKSKGFGFVSFEKHEDANQAVEDMNGKDINGKMVFVGRAQKKVERQA-EL 276
Query: 205 KTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCF 251
K KF N+++KNLD++ DE L+K F +G+ITSA VM + +G+SK F
Sbjct: 277 KRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE-EGRSKGF 335
Query: 252 GFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQG 311
GFV F + ++A KAV +NG+ + YV AQ R++E K + + + G
Sbjct: 336 GFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ----RKEERKAHL---TNQYMQRIAG 388
Query: 312 LNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAE 371
+ N + ++F P+ G+ + P+ SR
Sbjct: 389 MRALPANT-----------IINQF----------QPAA----GGYFMPAVPQAQSRPTYY 423
Query: 372 MNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQF 431
+M +P + ++ RLQ F M P AM S P R + P+G Q
Sbjct: 424 APNQMAQMRP------NPRWQQAGRLQG-FQGM-PNAMRQSGP-RPALRHLTPAGNAQAS 474
Query: 432 LYGQAPPAIIPPQMPPRGH--AYRYPLGRNMQDF--PFDMGAGSMLPVPVDMGAGIPRRD 487
A P + +PP A R P+ P+ + P P P+
Sbjct: 475 RGLPAAPQRV--GVPPAAQNLAPRAPVAAATPRAVPPYKYASNVRSPHPAIQPLQAPQPA 532
Query: 488 ASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVL 547
V P+TA + LA A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+L
Sbjct: 533 VHVQGQEPLTA--SMLAAAPPQEQKQMLGERLFPLIQAMHPSLAGKITGMLLEIDNSELL 590
Query: 548 HLLESPEALKAKVAEAMEVLRS 569
H+LESPE+L++KV EA+ VL++
Sbjct: 591 HMLESPESLRSKVEEAVAVLQA 612
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 108/289 (37%), Positives = 173/289 (59%), Gaps = 16/289 (5%)
Query: 118 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAID 176
++++ +L + L++ FS G +LS ++ D + +S G+ +V F+ A+ A+D
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 177 KLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTIT 236
+N +I K + + +R+ K+ NVF+KNLD+S ++ L F +G I
Sbjct: 71 TMNFDVIKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNIL 126
Query: 237 SAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKG 296
S V+ D +G SK + FV+FE D A +A+E +NG +DR+ +VG+ + + ERE EL
Sbjct: 127 SCKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAELGA 185
Query: 297 QFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGF 356
+ ++ N+YIKN GD +DDE+LKELFS++G S KVM DPSG SKG GF
Sbjct: 186 KAKEFT----------NVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDPSGKSKGFGF 235
Query: 357 VAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
V+F E+A++A+ +MNGK I K ++V AQ+K ER+A L+ +F Q++
Sbjct: 236 VSFEKHEDANQAVEDMNGKDINGKMVFVGRAQKKVERQAELKRKFEQLK 284
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 100/201 (49%), Gaps = 18/201 (8%)
Query: 201 TVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENA 259
T A +++V +L T+ L + F G + S V RD +S + +VNF+
Sbjct: 3 TTASSYPMASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
DA +A++ +N + + +Q+ + G N++IKNL
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVG----------------NVFIKNL 106
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
SID++ L + FS FG I SCKV+ D +G SKG FV F T + A RA+ +MNG ++
Sbjct: 107 DKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGMLLND 165
Query: 380 KPLYVAVAQRKEERRARLQAQ 400
+ ++V + ++ER A L A+
Sbjct: 166 RKVFVGRFKSRKEREAELGAK 186
>gi|365985359|ref|XP_003669512.1| hypothetical protein NDAI_0C06100 [Naumovozyma dairenensis CBS 421]
gi|343768280|emb|CCD24269.1| hypothetical protein NDAI_0C06100 [Naumovozyma dairenensis CBS 421]
Length = 585
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 256/554 (46%), Positives = 352/554 (63%), Gaps = 44/554 (7%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVGDLD +V+++ LYD+FS +G V S+RVCRD T+ SLGY YVN+ + +A+
Sbjct: 39 SASLYVGDLDPSVSEALLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGKKAI 98
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LN+TP+ + RIM+S RDP++RK G+ NIFIKNL ID+KAL+DTFS FGNILS K
Sbjct: 99 EKLNYTPIKGRLCRIMWSQRDPALRKKGSANIFIKNLHSDIDNKALYDTFSVFGNILSSK 158
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK- 207
IATD +G+SKGFGFV FE+ +A+ AID LNGML+N +++FVG L ++ER++ ++K
Sbjct: 159 IATDETGKSKGFGFVHFEDDTAAKEAIDALNGMLLNGQEIFVGPHLSRKERDSQLEESKA 218
Query: 208 -FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
F N++VKN++ TTDE+ ++F +YG + SA + + DGK K FGFV+FEN +DAAKAV
Sbjct: 219 NFTNIYVKNINLETTDEEFTELFSKYGKVLSAALEKTEDGKLKGFGFVDFENHEDAAKAV 278
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
E LNG +F D+E +V +AQKK ER QELK Q+E + E + K+QG+NL+IKNL DSIDDE
Sbjct: 279 EELNGSQFKDQELFVSRAQKKYERMQELKKQYEASRLEKMAKYQGVNLFIKNLDDSIDDE 338
Query: 327 KLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 386
KLKE F+ +G ITS +VMR +G S+G GFV FSTPEEA++A+ E N +++ KPLYVA+
Sbjct: 339 KLKEEFAPYGNITSVRVMRTENGKSRGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAI 398
Query: 387 AQRKEERRARLQAQF---SQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPP 443
AQRK+ RR++L Q +QMR + P GQ P +
Sbjct: 399 AQRKDVRRSQLAQQIQARNQMRYQQATAAAAAAAAGIP------------GQFMPPMFYG 446
Query: 444 QMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPR--RDASVGQPMPITAL-- 499
MPPRG PF+ P P M P+ R+A V MP
Sbjct: 447 VMPPRG-------------VPFNG------PNPQQMNGVPPQQFRNAPVYGGMPPQGAFP 487
Query: 500 --STALANASPEQQRTLLGESLYPLV--EQLERDAAAKVTGMLLEMDQTEVLHLLESPEA 555
A N +Q+R LGE LY V + ++ +AA K+TGM+L++ +V+ LLE+ E
Sbjct: 488 RNGAAGNNHFYQQKRQALGEQLYKKVSAKNVDEEAAGKITGMILDLPPQDVVSLLENDEL 547
Query: 556 LKAKVAEAMEVLRS 569
EA +S
Sbjct: 548 FDQHFKEASAAYQS 561
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 95/295 (32%), Positives = 158/295 (53%), Gaps = 19/295 (6%)
Query: 114 KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQ 172
++ + ++++ +LD S+ L+D FS G++ S ++ D + S G+ +V F + E+ +
Sbjct: 36 ENSSASLYVGDLDPSVSEALLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGK 95
Query: 173 NAIDKLNGMLINDKQVFVGHFLR--KQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFG 230
AI+KLN I G R +R+ K N+F+KNL ++ L F
Sbjct: 96 KAIEKLNYTPIK------GRLCRIMWSQRDPALRKKGSANIFIKNLHSDIDNKALYDTFS 149
Query: 231 EYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSER 290
+G I S+ + D GKSK FGFV+FE+ A +A++ALNG + +E +VG + ER
Sbjct: 150 VFGNILSSKIATDETGKSKGFGFVHFEDDTAAKEAIDALNGMLLNGQEIFVGPHLSRKER 209
Query: 291 EQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGI 350
+ +L +E+ F N+Y+KN+ DE+ ELFS++G + S + + G
Sbjct: 210 DSQL--------EESKANF--TNIYVKNINLETTDEEFTELFSKYGKVLSAALEKTEDGK 259
Query: 351 SKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
KG GFV F E+A++A+ E+NG + L+V+ AQ+K ER L+ Q+ R
Sbjct: 260 LKGFGFVDFENHEDAAKAVEELNGSQFKDQELFVSRAQKKYERMQELKKQYEASR 314
>gi|390476078|ref|XP_002759394.2| PREDICTED: polyadenylate-binding protein 1-like [Callithrix
jacchus]
Length = 633
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 228/406 (56%), Positives = 295/406 (72%), Gaps = 7/406 (1%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
S + SLYVGDL +VT++ LY+ FS G +LS+RVCRD+ TRRSLGY YVN+ PA
Sbjct: 4 SAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPA 63
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
DA RALD +NF + K +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FG
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFG 123
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 202
NILSCK+ D +G SKG+GFV FE +E+A+ AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 124 NILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Query: 203 --AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
A +F NV++KN E DE LK +F G S VM D GKSK FGFV+FE +
Sbjct: 183 LGARAKEFTNVYIKNFGEDMDDERLKDLF---GPALSVKVMTDESGKSKGFGFVSFERHE 239
Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
DA KAV+ +NGK+ + ++ YVG+AQKK ER+ ELK +FEQ ++ + ++QG+NLY+KNL
Sbjct: 240 DAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLD 299
Query: 321 DSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSK 380
D IDDE+L++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +K
Sbjct: 300 DGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATK 358
Query: 381 PLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSG 426
PLYVA+AQRKEER+A L Q+ Q P P P PSG
Sbjct: 359 PLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSG 404
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 108/298 (36%), Positives = 171/298 (57%), Gaps = 19/298 (6%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFEN 167
+PS ++++ +L + L++ FS G ILS ++ D + +S G+ +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
A+ A+D +N +I K V + +R+ K+ N+F+KNLD+S ++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYD 117
Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
F +G I S V+ D +G SK +GFV+FE + A +A+E +NG +DR+ +VG+ + +
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
ERE EL + ++ N+YIKN G+ +DDE+LK+L FG S KVM D
Sbjct: 177 KEREAELGARAKEFT----------NVYIKNFGEDMDDERLKDL---FGPALSVKVMTDE 223
Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
SG SKG GFV+F E+A +A+ EMNGK + K +YV AQ+K ER+ L+ +F QM+
Sbjct: 224 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 281
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA+A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 541 PLTA--SMLASAPPQEQKQMLGERLFPLIQAMHPSLAGKITGMLLEIDNSELLHMLESPE 598
Query: 555 ALKAKVAEAMEVLRSVAQQQA 575
+L++KV EA+ VL++ ++A
Sbjct: 599 SLRSKVDEAVAVLQAHQAKEA 619
>gi|35570|emb|CAA68428.1| unnamed protein product [Homo sapiens]
Length = 633
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 228/406 (56%), Positives = 295/406 (72%), Gaps = 7/406 (1%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
S + SLYVGDL +VT++ LY+ FS G +LS+RVCRD+ TRRSLGY YVN+ PA
Sbjct: 4 SAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPA 63
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
DA RALD +NF + K +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FG
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFG 123
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 202
NILSCK+ D +G SKG+GFV FE +E+A+ AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 124 NILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Query: 203 --AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
A +F NV++KN E DE LK +F G S VM D GKSK FGFV+FE +
Sbjct: 183 LGARAKEFTNVYIKNFGEDMDDERLKDLF---GPALSVKVMTDESGKSKGFGFVSFERHE 239
Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
DA KAV+ +NGK+ + ++ YVG+AQKK ER+ ELK +FEQ ++ + ++QG+NLY+KNL
Sbjct: 240 DAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLD 299
Query: 321 DSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSK 380
D IDDE+L++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +K
Sbjct: 300 DGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATK 358
Query: 381 PLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSG 426
PLYVA+AQRKEER+A L Q+ Q P P P PSG
Sbjct: 359 PLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSG 404
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 108/298 (36%), Positives = 171/298 (57%), Gaps = 19/298 (6%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFEN 167
+PS ++++ +L + L++ FS G ILS ++ D + +S G+ +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
A+ A+D +N +I K V + +R+ K+ N+F+KNLD+S ++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYD 117
Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
F +G I S V+ D +G SK +GFV+FE + A +A+E +NG +DR+ +VG+ + +
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
ERE EL + ++ N+YIKN G+ +DDE+LK+L FG S KVM D
Sbjct: 177 KEREAELGARAKEFT----------NVYIKNFGEDMDDERLKDL---FGPALSVKVMTDE 223
Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
SG SKG GFV+F E+A +A+ EMNGK + K +YV AQ+K ER+ L+ +F QM+
Sbjct: 224 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 281
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA+A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 541 PLTA--SMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPE 598
Query: 555 ALKAKVAEAMEVLRSVAQQQA 575
+L++KV EA+ VL++ ++A
Sbjct: 599 SLRSKVDEAVAVLQAHQAKEA 619
>gi|119612225|gb|EAW91819.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_e [Homo
sapiens]
Length = 633
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 228/406 (56%), Positives = 295/406 (72%), Gaps = 7/406 (1%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
S + SLYVGDL +VT++ LY+ FS G +LS+RVCRD+ TRRSLGY YVN+ PA
Sbjct: 4 SAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPA 63
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
DA RALD +NF + K +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FG
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFG 123
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 202
NILSCK+ D +G SKG+GFV FE +E+A+ AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 124 NILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Query: 203 --AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
A +F NV++KN E DE LK +F G S VM D GKSK FGFV+FE +
Sbjct: 183 LGARAKEFTNVYIKNFGEDMDDERLKDLF---GPALSVKVMTDESGKSKGFGFVSFERHE 239
Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
DA KAV+ +NGK+ + ++ YVG+AQKK ER+ ELK +FEQ ++ + ++QG+NLY+KNL
Sbjct: 240 DAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLD 299
Query: 321 DSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSK 380
D IDDE+L++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +K
Sbjct: 300 DGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATK 358
Query: 381 PLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSG 426
PLYVA+AQRKEER+A L Q+ Q P P P PSG
Sbjct: 359 PLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSG 404
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 108/298 (36%), Positives = 171/298 (57%), Gaps = 19/298 (6%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFEN 167
+PS ++++ +L + L++ FS G ILS ++ D + +S G+ +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
A+ A+D +N +I K V + +R+ K+ N+F+KNLD+S ++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYD 117
Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
F +G I S V+ D +G SK +GFV+FE + A +A+E +NG +DR+ +VG+ + +
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
ERE EL + ++ N+YIKN G+ +DDE+LK+L FG S KVM D
Sbjct: 177 KEREAELGARAKEFT----------NVYIKNFGEDMDDERLKDL---FGPALSVKVMTDE 223
Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
SG SKG GFV+F E+A +A+ EMNGK + K +YV AQ+K ER+ L+ +F QM+
Sbjct: 224 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 281
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA+A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 541 PLTA--SMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPE 598
Query: 555 ALKAKVAEAMEVLRSVAQQQA 575
+L++KV EA+ VL++ ++A
Sbjct: 599 SLRSKVDEAVAVLQAHQAKEA 619
>gi|348513241|ref|XP_003444151.1| PREDICTED: polyadenylate-binding protein 1-like isoform 2
[Oreochromis niloticus]
Length = 637
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 219/383 (57%), Positives = 292/383 (76%), Gaps = 4/383 (1%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
S + SLYVGDL +VT++ LY+ FS G +LS+RVCRD+ TRRSLGY YVN+ PA
Sbjct: 4 SAPSYPMASLYVGDLHQDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQPA 63
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
DA RALD +NF + + +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FG
Sbjct: 64 DAERALDTMNFDVIKGQPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFG 123
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 202
NILSCK+ D +G SKG+GFV FE +E+A+ AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 124 NILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Query: 203 --AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
A +F NV++KN + DE L+++F +YG S VM D +GKS+ FGFV+FE +
Sbjct: 183 LGARAKEFTNVYIKNFGDEMDDEKLRELFSKYGNAMSIRVMTDENGKSRGFGFVSFERHE 242
Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
DA KAV+ +NGK+ + + YVG+AQKK ER+ ELK +FEQ ++ + ++QG+NLY+KNL
Sbjct: 243 DAQKAVDEMNGKEMNGKLMYVGRAQKKVERQTELKRKFEQMKQDRMTRYQGVNLYVKNLD 302
Query: 321 DSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSK 380
D IDDE+L++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +K
Sbjct: 303 DGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATK 361
Query: 381 PLYVAVAQRKEERRARLQAQFSQ 403
PLYVA+AQRKEER+A L Q+ Q
Sbjct: 362 PLYVALAQRKEERQAHLTNQYMQ 384
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 107/298 (35%), Positives = 175/298 (58%), Gaps = 16/298 (5%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFEN 167
+PS ++++ +L + + L++ FS G ILS ++ D + +S G+ +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHQDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
A+ A+D +N +I + V + +R+ K+ N+F+KNLD+S ++ L
Sbjct: 62 PADAERALDTMNFDVIKGQPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYD 117
Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
F +G I S V+ D +G SK +GFV+FE + A +A+E +NG +DR+ +VG+ + +
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
ERE EL + ++ N+YIKN GD +DDEKL+ELFS++G S +VM D
Sbjct: 177 KEREAELGARAKEF----------TNVYIKNFGDEMDDEKLRELFSKYGNAMSIRVMTDE 226
Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
+G S+G GFV+F E+A +A+ EMNGK + K +YV AQ+K ER+ L+ +F QM+
Sbjct: 227 NGKSRGFGFVSFERHEDAQKAVDEMNGKEMNGKLMYVGRAQKKVERQTELKRKFEQMK 284
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 545 PLTA--SMLAAAPPQEQKQMLGERLFPLIQNMHPSLAGKITGMLLEIDNSELLHMLESPE 602
Query: 555 ALKAKVAEAMEVLRSVAQQQA 575
+L++KV EA+ VL++ ++A
Sbjct: 603 SLRSKVDEAVAVLQAHQAKEA 623
>gi|444726222|gb|ELW66761.1| Polyadenylate-binding protein 1-like protein [Tupaia chinensis]
Length = 568
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 258/582 (44%), Positives = 351/582 (60%), Gaps = 69/582 (11%)
Query: 46 LYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMY 105
LY+ FS G +LS+RVCRD++TRRSL Y Y+N+ PADA RALD +NF + + IRIM+
Sbjct: 2 LYEKFSPAGPILSIRVCRDVATRRSLCYAYINFQQPADAERALDTMNFEVIKGQPIRIMW 61
Query: 106 SHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQF 165
S RDP +RKSG GNIFIKNL+ SID+KAL+DTFS+FGNILSCK+ D G S+GFGFV F
Sbjct: 62 SQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDEHG-SRGFGFVHF 120
Query: 166 ENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTKFNNVFVKNLDESTTDE 223
E ++AQ AI +NGML+ND++VFVGHF ++ERE A +F N++VKNL +
Sbjct: 121 ETHDAAQRAISTMNGMLLNDRKVFVGHFKSRREREAELGARVMEFTNIYVKNLQVDVDER 180
Query: 224 DLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGK 283
L+ +F ++G + S VMRD G S+ FGFVNFE ++A KAV +NGK+ R YVG+
Sbjct: 181 GLQDLFSQFGKMLSVKVMRDSSGHSRGFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYVGR 240
Query: 284 AQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKV 343
AQK+ ER+ ELK +FEQ ++ ++++QG+NLY+KNL DSI+DEKL++ FS +G ITS KV
Sbjct: 241 AQKRLERQNELKRRFEQMKQDRLNRYQGVNLYVKNLDDSINDEKLRKEFSPYGVITSAKV 300
Query: 344 MRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQ 403
M + G SKG GFV FS+PEEA++A+ EMNG+++ +KPLYVA+AQRKEER+A L Q+ Q
Sbjct: 301 MTE-GGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEERKAILTNQYMQ 359
Query: 404 ----------------MRPVAM-----------------GPSVP----PRMPMYPPGPSG 426
+P + GP P PR PP PS
Sbjct: 360 RLSTVRALGGPLMGAFQQPTSYFLSAAPQAPAQAAYYGSGPMTPIQTAPRWTAQPPRPS- 418
Query: 427 LGQQFLYGQAPPAIIPPQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMG--AGIP 484
+ I PP M A+ + + P +P MG G
Sbjct: 419 ---------SASMIRPPGMTQHLSAHVSSVRQASTQAPHQ------VPHAQRMGECGGQG 463
Query: 485 RRDASVGQP-MPITALSTALANASPEQQRTLL-------GESLYPLVEQLERDAAAKVTG 536
+ + G+ + + L + P R + GE LYPL+ + A K+TG
Sbjct: 464 QEECGHGESKVLVMELVLEGSEDRPPWARQVCASEVVHTGERLYPLIRDVHHQLAGKITG 523
Query: 537 MLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNP 578
MLLE+D +E+L +LESPE+L AK+ EA+ VL+ A Q P
Sbjct: 524 MLLEIDNSELLLMLESPESLHAKIEEAVAVLQ--AHQALEQP 563
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 108/294 (36%), Positives = 167/294 (56%), Gaps = 29/294 (9%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ +L+ ++ + LYD FS G +LS +V D R G+G+V++ A RA+
Sbjct: 75 NIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDEHGSR--GFGFVHFETHDAAQRAIST 132
Query: 91 LNFTPLNNKSIRIMY--SHRDPSIRKSGTG-------NIFIKNLDKSIDHKALHDTFSSF 141
+N LN++ + + + S R+ R++ G NI++KNL +D + L D FS F
Sbjct: 133 MNGMLLNDRKVFVGHFKSRRE---REAELGARVMEFTNIYVKNLQVDVDERGLQDLFSQF 189
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
G +LS K+ D SG S+GFGFV FE E AQ A+ +NG ++ + ++VG ++ ER+
Sbjct: 190 GKMLSVKVMRDSSGHSRGFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYVGRAQKRLERQN 249
Query: 202 VAIKTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKS 248
+K +F N++VKNLD+S DE L+K F YG ITSA VM +G G S
Sbjct: 250 -ELKRRFEQMKQDRLNRYQGVNLYVKNLDDSINDEKLRKEFSPYGVITSAKVMTEG-GHS 307
Query: 249 KCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAM 302
K FGFV F + ++A KAV +NG+ + YV AQ+K ER+ L Q+ Q +
Sbjct: 308 KGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEERKAILTNQYMQRL 361
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 108/195 (55%), Gaps = 30/195 (15%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
T++YV +L +V + L DLFSQ G++LSV+V RD S+ S G+G+VN+ +A +A+
Sbjct: 166 TNIYVKNLQVDVDERGLQDLFSQFGKMLSVKVMRD-SSGHSRGFGFVNFEKHEEAQKAV- 223
Query: 90 VLNFTPLNNKSI--RIMYSHR--------------------DPSIRKSGTGNIFIKNLDK 127
+N K + R++Y R D R G N+++KNLD
Sbjct: 224 ----VHMNGKEVSGRLLYVGRAQKRLERQNELKRRFEQMKQDRLNRYQGV-NLYVKNLDD 278
Query: 128 SIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQ 187
SI+ + L FS +G I S K+ T+G G SKGFGFV F + E A A+ ++NG ++ K
Sbjct: 279 SINDEKLRKEFSPYGVITSAKVMTEG-GHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKP 337
Query: 188 VFVGHFLRKQERETV 202
++V RK+ER+ +
Sbjct: 338 LYVALAQRKEERKAI 352
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
N++ +LYV +LD ++ D +L FS G + S +V + S G+G+V +++P +A
Sbjct: 264 NRYQGVNLYVKNLDDSINDEKLRKEFSPYGVITSAKVMTEGG--HSKGFGFVCFSSPEEA 321
Query: 85 ARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNL 125
+A+ +N + K + + + R RK+ N +++ L
Sbjct: 322 TKAVTEMNGRIVGTKPLYVALAQRKEE-RKAILTNQYMQRL 361
>gi|148674413|gb|EDL06360.1| mCG5434 [Mus musculus]
Length = 534
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 249/524 (47%), Positives = 339/524 (64%), Gaps = 57/524 (10%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
+SLYVGDL +VT+S LY++FS +G +LS+RVCRD++TRRSLGY Y+N+ PADA RALD
Sbjct: 11 SSLYVGDLHPDVTESMLYEMFSPIGNILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 90 VLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKI 149
+NF + + IRIM+SHRDP +RKSG GNIFIKNL+ SID+KAL+DTFS+FG+ILS K+
Sbjct: 71 TMNFEVIKGQPIRIMWSHRDPGLRKSGMGNIFIKNLENSIDNKALYDTFSTFGSILSSKV 130
Query: 150 ATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTK 207
+ G S+GFGFV FE E+AQ AI+ +NGML+ND++VFVGHF +Q+RE A
Sbjct: 131 VYNEHG-SRGFGFVHFETHEAAQKAINTMNGMLLNDRKVFVGHFKSRQKREAELGARALG 189
Query: 208 FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVE 267
F N++VKNL + ++ L+ +F ++G + S VMRD +G+S+ FGFVNFE ++A KAV+
Sbjct: 190 FTNIYVKNLHANVDEQRLQDLFSQFGNMQSVKVMRDSNGQSRGFGFVNFEKHEEAQKAVD 249
Query: 268 ALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEK 327
+NGK+ + YVG+AQK++ER+ ELK +FEQ +E +++QG+NLY+KNL DSI+DE+
Sbjct: 250 HMNGKEVSGQLLYVGRAQKRAERQSELKRRFEQMKQERQNRYQGVNLYVKNLDDSINDER 309
Query: 328 LKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 387
LKE+FS +G ITS KVM + S SKG GFV FS+PEEA++A+ EMNG+++ +KPLYVA+A
Sbjct: 310 LKEVFSTYGVITSAKVMTESSH-SKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALA 368
Query: 388 QRKEERRARLQAQFSQMRPVAMGPSVP-------PRMPMYPPGPSGLGQQFLYGQAPPAI 440
QRKEER+A L Q+ + PS P P + P P Q Y +I
Sbjct: 369 QRKEERKAILTNQYRRR------PSHPVLSSFQQPTSYLLPAVPQSTAQAVYYSSG--SI 420
Query: 441 IPPQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPM-----P 495
P Q PR A + G P ASV QP+ P
Sbjct: 421 TPMQPDPRWTAQPH---------------------------GPP--SASVVQPLSTTQHP 451
Query: 496 ITALSTA--LANASPEQQRTLLGESLYPLVEQLERDAAAKVTGM 537
LS A +++ P QR +GE LY L+ K+TGM
Sbjct: 452 CIHLSGASQVSSQVPHTQR--VGERLYSLIHDACAPLTGKITGM 493
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
N++ +LYV +LD ++ D +L ++FS G + S +V + S S G+G+V +++P +A
Sbjct: 289 NRYQGVNLYVKNLDDSINDERLKEVFSTYGVITSAKVMTESS--HSKGFGFVCFSSPEEA 346
Query: 85 ARALDVLNFTPLNNKSIRIMYSHR 108
+A+ +N + K + + + R
Sbjct: 347 TKAVTEMNGRIVGTKPLYVALAQR 370
>gi|255556766|ref|XP_002519416.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223541279|gb|EEF42830.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 632
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 280/616 (45%), Positives = 385/616 (62%), Gaps = 68/616 (11%)
Query: 12 MSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSL 71
M+ P+ ++A A T SLYVG+L +V+D QL D FS+ + SVRVCRD ST RSL
Sbjct: 1 MAVPSTISATA------TASLYVGELHCDVSDGQLVDAFSEFNTLASVRVCRDSSTGRSL 54
Query: 72 GYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDH 131
YGYVN+ +P DA RA++ N TPLN K +R+M+SHRDP R++G GN+++KNL +SID+
Sbjct: 55 CYGYVNFISPEDAIRAIETKNHTPLNGKLMRVMWSHRDPDARRNGIGNVYVKNLSESIDN 114
Query: 132 KALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVG 191
L + F FG +LSCK+AT G+SKG GFVQFE+++SA +AI+KLNG ++ DKQ++VG
Sbjct: 115 VGLQELFGEFGTVLSCKVATFEDGKSKGHGFVQFESEDSANSAIEKLNGSIVGDKQIYVG 174
Query: 192 HFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCF 251
F++K +R + K+ N++VKNLD T+E L++ F E+G I S + RD G S+ F
Sbjct: 175 KFVKKSDRVLPSPDAKYTNLYVKNLDPGITEELLQEKFSEFGKIVSVAIARDECGSSRGF 234
Query: 252 GFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQG 311
GFVNFEN DDA A+E +NG + + YVG+AQK++EREQ L+ QFE+ KE + KF+G
Sbjct: 235 GFVNFENPDDARWAMERMNGTELGSKVLYVGRAQKRAEREQILRRQFEEKRKEQITKFKG 294
Query: 312 LNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAE 371
N+Y+KN+ D + DE+L+E FS+ GTITS K+M+D G SKG GFV FS+ EEAS+A+
Sbjct: 295 SNVYVKNIDDDVTDEELREHFSQCGTITSAKLMKDDKGRSKGFGFVCFSSSEEASKAVNT 354
Query: 372 MNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVP----PRMPMYPPGPS-- 425
+G M KPLYVA+AQRKEER+A+LQ Q++Q GPS P P+Y PS
Sbjct: 355 FHGYMFHRKPLYVAIAQRKEERQAQLQLQYAQRIAGFHGPSTPVIPGGYTPLYYTAPSQV 414
Query: 426 ----GLGQQFLY--------GQAPPA--IIPPQMPP--------------RGHAYRYPLG 457
G+ Q L G APP+ + P P R + + P G
Sbjct: 415 HPRPGMMYQPLAMRPGWRGNGFAPPSRPVFQPSHLPVMPISQRQHKQGRVRMNGHVLPQG 474
Query: 458 ---------------RNMQDFPFDMGAGSMLPVP------VDMGAGI----PRRDASVGQ 492
+++D P + AG VP V G+G+ P V Q
Sbjct: 475 GTQSVSYVQQPAQPLTSLKD-PSNQRAGQAKYVPNGRTCDVSKGSGVLSAAPNSTGPVSQ 533
Query: 493 PMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLES 552
+ LS+ LA ASP++Q+ +LGE LYPLV + + D AK+TGMLLEMD +E+L LLES
Sbjct: 534 GSEV--LSSMLAAASPDEQKQILGEQLYPLVRKHKPDLVAKITGMLLEMDNSELLLLLES 591
Query: 553 PEALKAKVAEAMEVLR 568
PE+L AKV EA++VL+
Sbjct: 592 PESLAAKVEEAVQVLK 607
>gi|118486179|gb|ABK94932.1| unknown [Populus trichocarpa]
Length = 408
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 274/411 (66%), Positives = 302/411 (73%), Gaps = 65/411 (15%)
Query: 241 MRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQ 300
MRDGDGKS+CFGFVNFENADDAAKA EALNGKKFDD+EW+VGKAQKK ERE ELK +FEQ
Sbjct: 1 MRDGDGKSRCFGFVNFENADDAAKAAEALNGKKFDDKEWFVGKAQKKYEREVELKQRFEQ 60
Query: 301 AMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFS 360
+MKE DKFQG NLYIKNL DSI DEK+KELFS FGTITSCKVMRDP+GIS+GSGFVAFS
Sbjct: 61 SMKEAADKFQGANLYIKNLDDSIGDEKIKELFSPFGTITSCKVMRDPNGISRGSGFVAFS 120
Query: 361 TPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMY 420
TPEEASRAL EMNGKM+ SKPLYVA+AQRKE+RRARLQAQFSQMRPVAM PSV RMPMY
Sbjct: 121 TPEEASRALLEMNGKMVASKPLYVALAQRKEDRRARLQAQFSQMRPVAMAPSV-GRMPMY 179
Query: 421 PPGPSGLGQQFLYGQAPPAIIPPQMPPRGHAYR-------YPLGRNMQDFPFDM------ 467
PP GLGQQ YGQ PPAI+PPQ G Y+ P G M +F M
Sbjct: 180 PPTGPGLGQQIFYGQGPPAIMPPQ---PGFGYQQQLVPGMRPGGAPMPNFFVPMVQQGQQ 236
Query: 468 ---------GAGS------------MLP---------------VPVDMGAG--------- 482
G G MLP VP+ AG
Sbjct: 237 GQRPGGRRAGTGQQSQQPVQLMQQQMLPRGRVYRYPPGRGLPDVPMTGVAGGMLSVPYDM 296
Query: 483 --IPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLE 540
+P RDA++ QP+PI AL+TALANA+P+QQRT+LGE+LYPLVEQLE +AAAKVTGMLLE
Sbjct: 297 GGMPMRDAALSQPIPIGALATALANATPDQQRTMLGENLYPLVEQLEPEAAAKVTGMLLE 356
Query: 541 MDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNPADQLASLSLNENL 591
MDQTEVLHLLESPEALK+KV EAMEVLR+V QQQA ADQLASLSLN+NL
Sbjct: 357 MDQTEVLHLLESPEALKSKVNEAMEVLRTV-QQQATGTADQLASLSLNDNL 406
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 97/162 (59%), Gaps = 14/162 (8%)
Query: 152 DGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFN-- 209
DG G+S+ FGFV FEN + A A + LNG +DK+ FVG +K ERE V +K +F
Sbjct: 3 DGDGKSRCFGFVNFENADDAAKAAEALNGKKFDDKEWFVGKAQKKYERE-VELKQRFEQS 61
Query: 210 -----------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFEN 258
N+++KNLD+S DE +K++F +GTITS VMRD +G S+ GFV F
Sbjct: 62 MKEAADKFQGANLYIKNLDDSIGDEKIKELFSPFGTITSCKVMRDPNGISRGSGFVAFST 121
Query: 259 ADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQ 300
++A++A+ +NGK + YV AQ+K +R L+ QF Q
Sbjct: 122 PEEASRALLEMNGKMVASKPLYVALAQRKEDRRARLQAQFSQ 163
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 78/148 (52%), Gaps = 18/148 (12%)
Query: 69 RSLGYGYVNYANPADAARALDVLNFTPLNNKSI-----------------RIMYSHRDPS 111
+S +G+VN+ N DAA+A + LN ++K R S ++ +
Sbjct: 7 KSRCFGFVNFENADDAAKAAEALNGKKFDDKEWFVGKAQKKYEREVELKQRFEQSMKEAA 66
Query: 112 IRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESA 171
+ G N++IKNLD SI + + + FS FG I SCK+ D +G S+G GFV F E A
Sbjct: 67 DKFQGA-NLYIKNLDDSIGDEKIKELFSPFGTITSCKVMRDPNGISRGSGFVAFSTPEEA 125
Query: 172 QNAIDKLNGMLINDKQVFVGHFLRKQER 199
A+ ++NG ++ K ++V RK++R
Sbjct: 126 SRALLEMNGKMVASKPLYVALAQRKEDR 153
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
+ ++F +LY+ +LD ++ D ++ +LFS G + S +V RD S G G+V ++ P
Sbjct: 65 AADKFQGANLYIKNLDDSIGDEKIKELFSPFGTITSCKVMRD-PNGISRGSGFVAFSTPE 123
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHR 108
+A+RAL +N + +K + + + R
Sbjct: 124 EASRALLEMNGKMVASKPLYVALAQR 149
>gi|395526571|ref|XP_003765434.1| PREDICTED: polyadenylate-binding protein 4 [Sarcophilus harrisii]
Length = 630
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 223/383 (58%), Positives = 291/383 (75%), Gaps = 4/383 (1%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
+ + + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ PA
Sbjct: 4 AASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPA 63
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
DA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+FG
Sbjct: 64 DAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET- 201
NILSCK+ D +G SKG+ FV FE +++A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 124 NILSCKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Query: 202 VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
+ K K F NV++KN + DE LK++F +YG S VM D GKSK FGFV+FE +
Sbjct: 183 LGAKAKEFTNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDSSGKSKGFGFVSFEKHE 242
Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
DA KAVE +NGK + + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL
Sbjct: 243 DANKAVEEMNGKDINGKMVFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLD 302
Query: 321 DSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSK 380
D+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+P+EA++A+ EMNG+++ SK
Sbjct: 303 DTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPDEATKAVTEMNGRIVGSK 361
Query: 381 PLYVAVAQRKEERRARLQAQFSQ 403
PLYVA+AQRKEER+A L Q+ Q
Sbjct: 362 PLYVALAQRKEERKAHLTNQYMQ 384
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 464 PFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLV 523
P+ A P P P+ V P+TA + LA A P++Q+ +LGE L+PL+
Sbjct: 509 PYKYAANVRSPHPAIQPLQTPQPAVHVQGQEPLTA--SMLAAAPPQEQKQMLGERLFPLI 566
Query: 524 EQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRS 569
+ + + A K+TGMLLE+D +E+LH+LESPE+L++KV EA+ VL++
Sbjct: 567 QTMHNNLAGKITGMLLEIDNSELLHMLESPESLRSKVEEAVAVLQA 612
>gi|312378306|gb|EFR24923.1| hypothetical protein AND_10202 [Anopheles darlingi]
Length = 645
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 223/383 (58%), Positives = 293/383 (76%), Gaps = 5/383 (1%)
Query: 24 GNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPAD 83
G + SLYVGDL ++T++ L++ FS G VLS+RVCRDL TRRSLGY YVN+ PAD
Sbjct: 5 GPNYQMASLYVGDLHADITEATLFEKFSSAGPVLSIRVCRDLITRRSLGYAYVNFQQPAD 64
Query: 84 AARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGN 143
A RALD +NF + + IRIM+S RDPS+RKSG GN+FIKNLDK ID+KA++DTFS+FGN
Sbjct: 65 AERALDTMNFDTIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKKIDNKAMYDTFSAFGN 124
Query: 144 ILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET-V 202
ILSCK+A D GQSKG+GFV FE +ESA +I+K+NGML+N+K+VFVG F+ ++ERE +
Sbjct: 125 ILSCKVAQDEKGQSKGYGFVHFETEESANTSIEKVNGMLLNEKKVFVGRFISRKEREKEL 184
Query: 203 AIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADD 261
K K F NV+VKN E T+E L ++F +YG+ITS VM DGKS+ FGFV FEN D
Sbjct: 185 GEKAKLFTNVYVKNFGEDLTEEALHEMFEKYGSITSHRVMMK-DGKSRGFGFVAFENPDA 243
Query: 262 AAKAVEALNGKKFDD-REWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
A +AV+ LN K+ D + YVG+AQKK+ER+ ELK +FEQ E + ++ G+NLY+KNL
Sbjct: 244 AERAVQELNAKELSDGKVLYVGRAQKKNERQMELKRRFEQLKMERLTRYHGVNLYVKNLD 303
Query: 321 DSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSK 380
D+IDDE+L++ F+ +GTITS KVM D G SKG GFV FS P+EA++A+ EMNG+++ SK
Sbjct: 304 DTIDDERLRKEFAPYGTITSAKVMLD-EGRSKGFGFVCFSAPDEATKAVTEMNGRIVGSK 362
Query: 381 PLYVAVAQRKEERRARLQAQFSQ 403
PLYVA+AQRKEER++ L +Q+ Q
Sbjct: 363 PLYVALAQRKEERKSHLASQYIQ 385
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/290 (33%), Positives = 163/290 (56%), Gaps = 17/290 (5%)
Query: 118 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATD-GSGQSKGFGFVQFENKESAQNAID 176
++++ +L I L + FSS G +LS ++ D + +S G+ +V F+ A+ A+D
Sbjct: 11 ASLYVGDLHADITEATLFEKFSSAGPVLSIRVCRDLITRRSLGYAYVNFQQPADAERALD 70
Query: 177 KLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTIT 236
+N I + + + +R+ K+ NVF+KNLD+ ++ + F +G I
Sbjct: 71 TMNFDTIKGRPIRIMW----SQRDPSLRKSGVGNVFIKNLDKKIDNKAMYDTFSAFGNIL 126
Query: 237 SAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKG 296
S V +D G+SK +GFV+FE + A ++E +NG ++++ +VG+ + ERE+EL
Sbjct: 127 SCKVAQDEKGQSKGYGFVHFETEESANTSIEKVNGMLLNEKKVFVGRFISRKEREKELG- 185
Query: 297 QFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGF 356
E F N+Y+KN G+ + +E L E+F ++G+ITS +VM G S+G GF
Sbjct: 186 -------EKAKLF--TNVYVKNFGEDLTEEALHEMFEKYGSITSHRVMMK-DGKSRGFGF 235
Query: 357 VAFSTPEEASRALAEMNGKMIV-SKPLYVAVAQRKEERRARLQAQFSQMR 405
VAF P+ A RA+ E+N K + K LYV AQ+K ER+ L+ +F Q++
Sbjct: 236 VAFENPDAAERAVQELNAKELSDGKVLYVGRAQKKNERQMELKRRFEQLK 285
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 75/132 (56%), Gaps = 14/132 (10%)
Query: 441 IPPQMP---PRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPIT 497
+ PQM PR +Y+Y P +P+P+ + ++ V P+T
Sbjct: 516 VAPQMTAAQPRPQSYKYTANMRNPQVP------QQVPIPLQQ---VNQQAVIVKGQEPLT 566
Query: 498 ALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALK 557
A + LA A P +Q+ +LGE L+PL+E + K+TGMLLE+D +E+LH+LE E+LK
Sbjct: 567 A--SMLAAAQPAEQKNMLGERLFPLIEAMHPQLTGKITGMLLEIDNSELLHMLEHHESLK 624
Query: 558 AKVAEAMEVLRS 569
AKV EA+ VL++
Sbjct: 625 AKVEEAVAVLQA 636
>gi|334312764|ref|XP_003339775.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
1-like [Monodelphis domestica]
Length = 614
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 230/437 (52%), Positives = 308/437 (70%), Gaps = 10/437 (2%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
ASG + SLYVGDL +VT++ LY+ FS G ++S+RVCRD++TRRSLGY Y+N+ P
Sbjct: 3 ASGPGYPLASLYVGDLHPDVTEAMLYEKFSAAGPIMSIRVCRDVATRRSLGYAYINFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + + IRIM+S RDP +RKSG GNIFIKNLD SID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFEVIKGRPIRIMWSQRDPGLRKSGIGNIFIKNLDDSIDNKALYDTFSTF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G S+GFGFV FE E+A AI+ +NGML+ND++VFVGHF +QERE
Sbjct: 123 GNILSCKVVCDENG-SRGFGFVHFETHEAANQAINTMNGMLLNDRKVFVGHFKSRQEREA 181
Query: 202 V--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
A +F N++VKN + DE L+++F ++G S VM D +G+S+ FGFVNFE
Sbjct: 182 ELGARALEFTNIYVKNFEGDMDDECLQELFSQFGKTLSVKVMVDENGQSRGFGFVNFEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
++A KAV +NGK+ R YVG+AQK+SER+ ELK +FEQ +E V+++QG+NLY+KNL
Sbjct: 242 EEAQKAVSNMNGKELGGRVLYVGRAQKRSERQSELKRRFEQMKQERVNRYQGVNLYVKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D IDDEKL++ FS +G ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +
Sbjct: 302 DDIIDDEKLRKEFSPYGVITSAKVMTE-GGHSKGFGFVCFSSPEEATKAVTEMNGRIVST 360
Query: 380 KPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVP----PRMPMYPPGPSGLGQQFLYGQ 435
KPLYVA+AQRKEER+A L +Q+ Q G + P P P P + Y
Sbjct: 361 KPLYVALAQRKEERKAILTSQYMQRLSTLRGLNGPLFPQPTNYFLPAIPQPPARATFY-- 418
Query: 436 APPAIIPPQMPPRGHAY 452
+P + P + PR +Y
Sbjct: 419 SPSTVAPVRPAPRWTSY 435
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 55/75 (73%), Gaps = 2/75 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA+A ++Q+ +LG+ LYPL+ + A K+TGMLLE+D +E+L LLESPE
Sbjct: 530 PLTA--SMLASAPVQEQKQMLGDRLYPLIYGIHAQLAGKITGMLLEIDNSELLLLLESPE 587
Query: 555 ALKAKVAEAMEVLRS 569
+L +K+ EA+ L++
Sbjct: 588 SLHSKIEEAIAALQA 602
>gi|355784464|gb|EHH65315.1| Polyadenylate-binding protein 1-like protein [Macaca fascicularis]
Length = 635
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 275/638 (43%), Positives = 372/638 (58%), Gaps = 91/638 (14%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRD-----LSTRRSLGYGYV 76
ASG+ + SLYVGDL +VT++ LY+ FS G +LS+RVCRD L TRRSLGY Y+
Sbjct: 3 ASGSGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRFLPTRRSLGYAYI 62
Query: 77 NYANPAD-------AARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSI 129
N+ PAD A RALD +NF L + IRIM+S RDP +RKSG GNIFIKNL+ SI
Sbjct: 63 NFQQPADGEEQAQRAERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSI 122
Query: 130 DHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVF 189
D+KAL+DTFS+FGNILSCK+ D G S+GFGFV FE E+AQ AI+ +NGML+ND++VF
Sbjct: 123 DNKALYDTFSTFGNILSCKVVCDEHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVF 181
Query: 190 VGHFLRKQERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGK 247
VGHF ++ERE A +F N++VKNL ++ L+ +F ++G + S VMRD G
Sbjct: 182 VGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGH 241
Query: 248 SKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVD 307
S+CFGFVNFE ++A KAV +NGK+ R Y G+AQK+ ER+ ELK +FEQ ++ +
Sbjct: 242 SRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLR 301
Query: 308 KFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVM---------RDPSGISKGSGFVA 358
++QG+NLY+KNL DSIDD+KL++ FS +G ITS K + DP G S ++
Sbjct: 302 RYQGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKGVGAGYPFWGSADPVGTCSPSAALS 361
Query: 359 FSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQF----SQMRPVA------ 408
EEA++A+ EMNG+++ +KPLYVA+AQRKEER+A L Q+ S MR ++
Sbjct: 362 -GLKEEATKAVTEMNGRIVGTKPLYVALAQRKEERKAILTNQYMQRLSTMRTLSNPLLGS 420
Query: 409 -----------------------MGPSVP----PRMPMYPPGPSGLGQQFLYG------- 434
GP P PR PP PS
Sbjct: 421 FQQPSSYFLPAVPQPPAQAAYYGCGPVTPTQPAPRWTSQPPRPSCASMVRPPVMPRRPPA 480
Query: 435 ------QAPPAIIPPQMPPRGHAYRYPLGRNMQDFPFDMGAGS----MLPVPVDMGAGIP 484
QA + P+M P H R P +G + +LP A
Sbjct: 481 HISSVRQASTQV--PRMVP--HTQRVANIGTQTTGPGGVGCCTPGRPLLPYKCSSAAHST 536
Query: 485 RR--DASVGQP--MPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLE 540
R + +V P P+TA + LA A +Q+ ++GE LYPL+ + A K+TGMLLE
Sbjct: 537 YRVQEPAVHIPGQEPLTA--SMLAAAPLHEQKQMIGERLYPLIHDVHTQLAGKITGMLLE 594
Query: 541 MDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNP 578
+D +E+L +LESPE+L AK+ EA+ VL+ A Q P
Sbjct: 595 IDNSELLLMLESPESLHAKIDEAVAVLQ--AHQAVEQP 630
>gi|281350417|gb|EFB26001.1| hypothetical protein PANDA_001865 [Ailuropoda melanoleuca]
Length = 640
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 227/410 (55%), Positives = 296/410 (72%), Gaps = 8/410 (1%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
S + SLYVGDL +VT++ LY+ FS G +LS+R+CRD TRRSLGY YVNY P
Sbjct: 4 SAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPV 63
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTG----NIFIKNLDKSIDHKALHDTF 138
DA RAL+ LNF + + +RIM+S RDPS+RKSG G NIFIKNLDKSID+KAL+DTF
Sbjct: 64 DAKRALETLNFDVIKGRPVRIMWSQRDPSLRKSGVGGGVGNIFIKNLDKSIDNKALYDTF 123
Query: 139 SSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQE 198
S+FGNILSCK+ D +G SKG+GFV FE +E+A+ AI+K+NGML+ND++VFVG F ++E
Sbjct: 124 SAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKE 182
Query: 199 RETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNF 256
RE A +F NV++KN E DE LK +FG++G S VM D GKSK FGFV+F
Sbjct: 183 REAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSF 242
Query: 257 ENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYI 316
E +DA KAV+ +NGK+ + ++ YVG+AQKK ER+ ELK +FEQ ++ + ++QG+NLY+
Sbjct: 243 ERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYV 302
Query: 317 KNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKM 376
KNL D IDDE+L++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG++
Sbjct: 303 KNLDDGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRI 361
Query: 377 IVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSG 426
+ +KPLYVA+AQRKEER+A L Q+ Q P P P PSG
Sbjct: 362 VATKPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSG 411
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 107/298 (35%), Positives = 170/298 (57%), Gaps = 12/298 (4%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFEN 167
+PS ++++ +L + L++ FS G ILS +I D + +S G+ +V ++
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQ 61
Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
A+ A++ LN +I + V + R + N+F+KNLD+S ++ L
Sbjct: 62 PVDAKRALETLNFDVIKGRPVRIMWSQRDPSLRKSGVGGGVGNIFIKNLDKSIDNKALYD 121
Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
F +G I S V+ D +G SK +GFV+FE + A +A+E +NG +DR+ +VG+ + +
Sbjct: 122 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 180
Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
ERE EL + ++ N+YIKN G+ +DDE+LK+LF +FG S KVM D
Sbjct: 181 KEREAELGARAKEFT----------NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE 230
Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
SG SKG GFV+F E+A +A+ EMNGK + K +YV AQ+K ER+ L+ +F QM+
Sbjct: 231 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 288
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA+A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 548 PLTA--SMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPE 605
Query: 555 ALKAKVAEAMEVLRSVAQQQA 575
+L++KV EA+ VL++ ++A
Sbjct: 606 SLRSKVDEAVAVLQAHQAKEA 626
>gi|340375830|ref|XP_003386437.1| PREDICTED: polyadenylate-binding protein 1-like [Amphimedon
queenslandica]
Length = 618
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 225/394 (57%), Positives = 300/394 (76%), Gaps = 6/394 (1%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL +V ++ L++ FS+ G VLS+RVCRDL T+RSLGY YVN+ PADA RALD
Sbjct: 16 SLYVGDLLPDVNEAVLFEQFSKAGPVLSIRVCRDLITKRSLGYAYVNFQQPADAERALDT 75
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+N+ P+ + RIM+S RDPS+R+SG GNIFIKNLDKSIDHKAL+DTFS+FGNILSCK+A
Sbjct: 76 MNYEPIKGQPCRIMWSQRDPSLRRSGVGNIFIKNLDKSIDHKALYDTFSAFGNILSCKVA 135
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFL-RKQERETVAIKTKFN 209
TDG+ SKGFGFV F+ +E+A AI+K+NG L+ND +V+VG F+ RK T +
Sbjct: 136 TDGNRHSKGFGFVHFDEQEAADLAIEKVNGKLLNDMKVYVGKFIPRKDRSHTNGFNQHYT 195
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEAL 269
NVF+KN E TD L +F +YG+I SAVVM+DG+G SK FGFV+FE+ + A+ AV+A+
Sbjct: 196 NVFIKNFGEDFTDTMLYDVFEKYGSIVSAVVMKDGEGLSKGFGFVSFESHEAASAAVQAV 255
Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLK 329
+ + R+ Y G+AQKK+ER +EL + E+ +E + ++QG+NLYIKNL D++ +EKLK
Sbjct: 256 HNSIVNGRQVYCGRAQKKNERSRELMRRKEEQRQERLSRYQGVNLYIKNLEDTLGEEKLK 315
Query: 330 ELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQR 389
FS+FG+ITS K+M D G SKG GFV FS+PEEA++A+ EMNG+++VSKPLYVA+AQR
Sbjct: 316 SEFSKFGSITSAKIMTDEFGHSKGFGFVCFSSPEEATKAVTEMNGRIVVSKPLYVALAQR 375
Query: 390 KEERRARLQAQFSQMRPVAMGPSVPP-RMPMYPP 422
KEER+A L AQ +M+ +A G +P +M MYPP
Sbjct: 376 KEERQAHLAAQ--RMQRIARG--IPQGQMQMYPP 405
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 100/187 (53%), Gaps = 17/187 (9%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
T++++ + + TD+ LYD+F + G ++S V +D S G+G+V++ + A+ A+
Sbjct: 195 TNVFIKNFGEDFTDTMLYDVFEKYGSIVSAVVMKD-GEGLSKGFGFVSFESHEAASAAVQ 253
Query: 90 VLNFTPLNNKSI----------------RIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKA 133
++ + +N + + R R + + N++IKNL+ ++ +
Sbjct: 254 AVHNSIVNGRQVYCGRAQKKNERSRELMRRKEEQRQERLSRYQGVNLYIKNLEDTLGEEK 313
Query: 134 LHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHF 193
L FS FG+I S KI TD G SKGFGFV F + E A A+ ++NG ++ K ++V
Sbjct: 314 LKSEFSKFGSITSAKIMTDEFGHSKGFGFVCFSSPEEATKAVTEMNGRIVVSKPLYVALA 373
Query: 194 LRKQERE 200
RK+ER+
Sbjct: 374 QRKEERQ 380
>gi|449268618|gb|EMC79472.1| Polyadenylate-binding protein 4 [Columba livia]
Length = 630
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 224/383 (58%), Positives = 290/383 (75%), Gaps = 4/383 (1%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
+ + + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ PA
Sbjct: 4 AASSYPMASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPA 63
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
DA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+FG
Sbjct: 64 DAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET- 201
NILSCK+ D +G SKG+ FV FE +++A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 124 NILSCKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Query: 202 VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
+ K K F NV++KN + DE LK++F +YG S VM D GKSK FGFV+FE +
Sbjct: 183 LGAKAKEFTNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDPTGKSKGFGFVSFEKHE 242
Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
DA KAVE +NGK + + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL
Sbjct: 243 DANKAVEEMNGKDINGKMVFVGRAQKKVERQAELKRKFEQLKQERLSRYQGVNLYIKNLD 302
Query: 321 DSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSK 380
D+IDDEKL++ FS FG ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ SK
Sbjct: 303 DTIDDEKLRKEFSPFGAITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSK 361
Query: 381 PLYVAVAQRKEERRARLQAQFSQ 403
PLYVA+AQRKEER+A L Q+ Q
Sbjct: 362 PLYVALAQRKEERKAHLTNQYMQ 384
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 108/289 (37%), Positives = 173/289 (59%), Gaps = 16/289 (5%)
Query: 118 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAID 176
++++ +L + L++ FS G +LS ++ D + +S G+ +V F+ A+ A+D
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 177 KLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTIT 236
+N +I K + + +R+ K+ NVF+KNLD+S ++ L F +G I
Sbjct: 71 TMNFDVIKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNIL 126
Query: 237 SAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKG 296
S V+ D +G SK + FV+FE D A +A+E +NG +DR+ +VG+ + + ERE EL
Sbjct: 127 SCKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAELGA 185
Query: 297 QFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGF 356
+ ++ N+YIKN GD +DDE+LKELFS++G S KVM DP+G SKG GF
Sbjct: 186 KAKEFT----------NVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDPTGKSKGFGF 235
Query: 357 VAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
V+F E+A++A+ EMNGK I K ++V AQ+K ER+A L+ +F Q++
Sbjct: 236 VSFEKHEDANKAVEEMNGKDINGKMVFVGRAQKKVERQAELKRKFEQLK 284
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 100/201 (49%), Gaps = 18/201 (8%)
Query: 201 TVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENA 259
T A +++V +L T+ L + F G + S V RD +S + +VNF+
Sbjct: 3 TAASSYPMASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
DA +A++ +N + + +Q+ + G N++IKNL
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVG----------------NVFIKNL 106
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
SID++ L + FS FG I SCKV+ D +G SKG FV F T + A RA+ +MNG ++
Sbjct: 107 DKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGMLLND 165
Query: 380 KPLYVAVAQRKEERRARLQAQ 400
+ ++V + ++ER A L A+
Sbjct: 166 RKVFVGRFKSRKEREAELGAK 186
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 63/87 (72%), Gaps = 5/87 (5%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 540 PLTA--SMLAAAPPQEQKQMLGERLFPLIQAMHPSLAGKITGMLLEIDNSELLHMLESPE 597
Query: 555 ALKAKVAEAMEVLRSVAQQQANNPADQ 581
+L++KV EA+ VL++ QA A Q
Sbjct: 598 SLRSKVEEAVAVLQA---HQAKKEAAQ 621
>gi|384251873|gb|EIE25350.1| polyadenylate binding protein [Coccomyxa subellipsoidea C-169]
Length = 681
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 235/425 (55%), Positives = 319/425 (75%), Gaps = 20/425 (4%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
+SLYVGDLD +VT++QL+++FSQ+G V S+RVCRD TRRSLGY YVNY + DAA A
Sbjct: 24 SSLYVGDLDRDVTEAQLFEIFSQIGPVASIRVCRDAVTRRSLGYAYVNYNSALDAAAAER 83
Query: 90 V---LNFTPL--------NNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTF 138
LN+T + ++K +RIM+SHRDP+ RKSG GNIFIKNLDK ID+KALHDTF
Sbjct: 84 AIEALNYTSVIPGKEGGEDSKPMRIMWSHRDPAFRKSGVGNIFIKNLDKDIDNKALHDTF 143
Query: 139 SSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQE 198
++FG ILSCK+ATD +G SKG+GFV +E +E+AQ AI+K+NGML+ K+VFVG FL++ E
Sbjct: 144 TAFGTILSCKVATDLAGNSKGYGFVHYEKEEAAQLAIEKVNGMLLEGKKVFVGPFLKRTE 203
Query: 199 RETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFEN 258
R V + + NVFVKNL E+ TDE+++K+F E+G +TS +M+D GKSK FGF+NFE+
Sbjct: 204 R-PVDKEQHYTNVFVKNLSENLTDEEVEKMFNEHGMVTSFAIMKDEAGKSKGFGFINFED 262
Query: 259 ADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKN 318
A+ A AV ALNGK+ D +E Y G+AQKK+ERE ELK +F++ +E + K+QG+NLY+KN
Sbjct: 263 AEGAHAAVTALNGKEIDGKELYCGRAQKKAEREAELKQKFDEVRQERIAKYQGMNLYVKN 322
Query: 319 LGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIV 378
L D +DD++L+ F+ GTITS KVM+D +G SKG GFV +S+PEEA+RA+ EMNGKM++
Sbjct: 323 LVDEVDDDQLRAEFAPHGTITSAKVMKDSAGKSKGFGFVCYSSPEEATRAVTEMNGKMLL 382
Query: 379 SKPLYVAVAQRKEERRARLQAQFSQMR--PVAMGPSVPPRMPM---YPPGPSGLGQQFLY 433
KP+YVA+AQR+E RR +L+ Q++Q R P++ P+ P +PM +PP QQ+
Sbjct: 383 GKPMYVALAQRREVRRQQLEQQYTQQRVAPMSGRPNAPGPVPMPGVFPPNAVSFPQQYF- 441
Query: 434 GQAPP 438
APP
Sbjct: 442 --APP 444
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 51/61 (83%)
Query: 508 PEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVL 567
PEQQ+ +LGE L+PLV++L+ + A K+TGMLLEMD +E+L LLESP+AL AKV EA+ VL
Sbjct: 603 PEQQKQMLGERLFPLVQRLQPELAGKITGMLLEMDNSELLLLLESPDALVAKVDEAITVL 662
Query: 568 R 568
+
Sbjct: 663 K 663
>gi|119612222|gb|EAW91816.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_c [Homo
sapiens]
gi|119612227|gb|EAW91821.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_c [Homo
sapiens]
Length = 419
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 229/409 (55%), Positives = 303/409 (74%), Gaps = 14/409 (3%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL +VT++ LY+ FS G +LS+RVCRD+ TRRSLGY YVN+ PADA RALD
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF + K +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FGNILSCK+
Sbjct: 72 MNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVV 131
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTKF 208
D +G SKG+GFV FE +E+A+ AI+K+NGML+ND++VFVG F ++ERE A +F
Sbjct: 132 CDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEF 190
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NV++KN E DE LK +FG++G S VM D GKSK FGFV+FE +DA KAV+
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 250
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
+NGK+ + ++ YVG+AQKK ER+ ELK +FEQ ++ + ++QG+NLY+KNL D IDDE+L
Sbjct: 251 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 310
Query: 329 KELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +KPLYVA+AQ
Sbjct: 311 RKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQ 369
Query: 389 RKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAP 437
RKEER+A L Q+ M+ +A +V P P+ + L+G P
Sbjct: 370 RKEERQAHLTNQY--MQRMASVRAV--------PNPASTSFRLLHGSYP 408
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 109/298 (36%), Positives = 173/298 (58%), Gaps = 16/298 (5%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFEN 167
+PS ++++ +L + L++ FS G ILS ++ D + +S G+ +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
A+ A+D +N +I K V + +R+ K+ N+F+KNLD+S ++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYD 117
Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
F +G I S V+ D +G SK +GFV+FE + A +A+E +NG +DR+ +VG+ + +
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
ERE EL + ++ N+YIKN G+ +DDE+LK+LF +FG S KVM D
Sbjct: 177 KEREAELGARAKEFT----------NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE 226
Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
SG SKG GFV+F E+A +A+ EMNGK + K +YV AQ+K ER+ L+ +F QM+
Sbjct: 227 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 284
>gi|119113388|ref|XP_309558.3| AGAP011092-PA [Anopheles gambiae str. PEST]
gi|116131767|gb|EAA05186.3| AGAP011092-PA [Anopheles gambiae str. PEST]
Length = 634
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 221/376 (58%), Positives = 292/376 (77%), Gaps = 5/376 (1%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL ++T++ L++ FS G VLS+RVCRDL TRRSLGY YVN+ PADA RALD
Sbjct: 3 SLYVGDLHSDITEATLFEKFSSAGPVLSIRVCRDLITRRSLGYAYVNFQQPADAERALDT 62
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF P+ + IRIM+S RDPS+RKSG GN+FIKNLDK ID+KA++DTFS+FGNILSCK+A
Sbjct: 63 MNFDPIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKKIDNKAMYDTFSAFGNILSCKVA 122
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET-VAIKTK-F 208
D GQSKG+GFV FE +ESA +I+K+NGML+N+K+V+VG F+ ++ERE + K K F
Sbjct: 123 QDEKGQSKGYGFVHFETEESANTSIEKVNGMLLNEKKVYVGRFISRKEREKELGEKAKLF 182
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NV+VKN E T+E L+ +F ++G ITS VM DGKS+ FGFV FE +DA +AV+
Sbjct: 183 TNVYVKNFGEDLTEEALRDMFEKFGPITSHRVMTK-DGKSRGFGFVAFEKPEDAEEAVQK 241
Query: 269 LNGKKFDD-REWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEK 327
LNGK+ D + YVG+AQKK+ER+ ELK +FEQ E + ++ G+NLY+KNL D+IDDE+
Sbjct: 242 LNGKELSDGKVLYVGRAQKKNERQMELKRRFEQLKMERLTRYHGVNLYVKNLDDTIDDER 301
Query: 328 LKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 387
L++ F+ +GTITS KVM D G SKG GFV FS P+EA++A+ EMNG+++ SKPLYVA+A
Sbjct: 302 LRKEFAPYGTITSAKVMLD-EGRSKGFGFVCFSAPDEATKAVTEMNGRIVGSKPLYVALA 360
Query: 388 QRKEERRARLQAQFSQ 403
QRKEER++ L +Q+ Q
Sbjct: 361 QRKEERKSHLASQYIQ 376
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/290 (33%), Positives = 164/290 (56%), Gaps = 17/290 (5%)
Query: 118 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATD-GSGQSKGFGFVQFENKESAQNAID 176
++++ +L I L + FSS G +LS ++ D + +S G+ +V F+ A+ A+D
Sbjct: 2 ASLYVGDLHSDITEATLFEKFSSAGPVLSIRVCRDLITRRSLGYAYVNFQQPADAERALD 61
Query: 177 KLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTIT 236
+N I + + + +R+ K+ NVF+KNLD+ ++ + F +G I
Sbjct: 62 TMNFDPIKGRPIRIMW----SQRDPSLRKSGVGNVFIKNLDKKIDNKAMYDTFSAFGNIL 117
Query: 237 SAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKG 296
S V +D G+SK +GFV+FE + A ++E +NG ++++ YVG+ + ERE+EL
Sbjct: 118 SCKVAQDEKGQSKGYGFVHFETEESANTSIEKVNGMLLNEKKVYVGRFISRKEREKELG- 176
Query: 297 QFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGF 356
E F N+Y+KN G+ + +E L+++F +FG ITS +VM G S+G GF
Sbjct: 177 -------EKAKLF--TNVYVKNFGEDLTEEALRDMFEKFGPITSHRVM-TKDGKSRGFGF 226
Query: 357 VAFSTPEEASRALAEMNGKMIV-SKPLYVAVAQRKEERRARLQAQFSQMR 405
VAF PE+A A+ ++NGK + K LYV AQ+K ER+ L+ +F Q++
Sbjct: 227 VAFEKPEDAEEAVQKLNGKELSDGKVLYVGRAQKKNERQMELKRRFEQLK 276
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 102/193 (52%), Gaps = 24/193 (12%)
Query: 28 LTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRV-CRDLSTRRSLGYGYVNYANPADAAR 86
L T++YV + ++T+ L D+F + G + S RV +D +R G+G+V + P DA
Sbjct: 181 LFTNVYVKNFGEDLTEEALRDMFEKFGPITSHRVMTKDGKSR---GFGFVAFEKPEDAEE 237
Query: 87 ALDVLNFTPLNN-----------KSIRIMYSHR-------DPSIRKSGTGNIFIKNLDKS 128
A+ LN L++ K+ R M R + R G N+++KNLD +
Sbjct: 238 AVQKLNGKELSDGKVLYVGRAQKKNERQMELKRRFEQLKMERLTRYHGV-NLYVKNLDDT 296
Query: 129 IDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQV 188
ID + L F+ +G I S K+ D G+SKGFGFV F + A A+ ++NG ++ K +
Sbjct: 297 IDDERLRKEFAPYGTITSAKVMLD-EGRSKGFGFVCFSAPDEATKAVTEMNGRIVGSKPL 355
Query: 189 FVGHFLRKQERET 201
+V RK+ER++
Sbjct: 356 YVALAQRKEERKS 368
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 55/75 (73%), Gaps = 2/75 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+T ++ LA A P +Q+ +LGE L+PL+E + + A K+TGMLLE+D +E+LH+LE E
Sbjct: 553 PLT--TSMLAAAQPAEQKQMLGERLFPLIELMYPNLAGKITGMLLEIDNSELLHMLEHKE 610
Query: 555 ALKAKVAEAMEVLRS 569
+L AK EA+ VL++
Sbjct: 611 SLNAKAEEAVAVLQA 625
>gi|384486188|gb|EIE78368.1| hypothetical protein RO3G_03072 [Rhizopus delemar RA 99-880]
Length = 499
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 250/502 (49%), Positives = 345/502 (68%), Gaps = 36/502 (7%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVG+LD +VT++ L+++F+ +G V S+RVCRD TRRSLGY YVN+ ADA RAL
Sbjct: 27 SASLYVGELDPSVTEAMLFEMFNIIGPVSSIRVCRDAVTRRSLGYAYVNFHRMADAERAL 86
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LN++ + +S RIM+S RDPS+RK GNIFIKNLD SIDHKALHDTFS+FGNILSCK
Sbjct: 87 ETLNYSMIKGRSCRIMWSQRDPSLRKGNNGNIFIKNLDPSIDHKALHDTFSAFGNILSCK 146
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKT 206
IA D G SKG+GFV +E E+A++AI +NGML+ND++VFVGH + ++ERE+ +
Sbjct: 147 IAHDEQGNSKGYGFVHYETLEAAESAIKSVNGMLLNDRKVFVGHHISRKERESKLGESRV 206
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
+F N++VKN+ TDE+L ++FG+YGTITS V+ RD DG SK FGFVNFE DA AV
Sbjct: 207 QFTNIYVKNIPFDVTDEELSQLFGKYGTITSCVITRDDDGTSKGFGFVNFEKHQDAQNAV 266
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
+ L+ K F ++ YV +AQKK+ERE+EL+ Q+E+A E + K+QG+NLY+KNL D +DD+
Sbjct: 267 DDLHKKDFRGQDLYVSRAQKKNEREEELRRQYEEAKLEKMSKYQGVNLYVKNLDDDMDDD 326
Query: 327 KLKELFSEFGTITSCKVMRD-PSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVA 385
+L++ FS +G ITS K+MRD + IS+G GFV F++PE+A+RA+ EMNG++I SKP+YVA
Sbjct: 327 RLRDEFSVYGVITSAKIMRDEKTNISRGFGFVCFTSPEDATRAVTEMNGRIIGSKPIYVA 386
Query: 386 VAQRKEERRARLQ---AQFSQMRPVAMGPSV-PPRMPMYPPGPSGLGQQFLYGQAPPAII 441
+AQRKE RR++L+ AQ +Q++ M PSV PP M P G + + ++ AP
Sbjct: 387 IAQRKEVRRSQLEIQMAQRNQLKQAMMPPSVFPPTMYGPPAGMAAAASRSVFQGAPM--- 443
Query: 442 PPQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALST 501
P P +G YP + + S P P + S +P+ ++
Sbjct: 444 -PSFPAQG----YPATQRL----------SPPPQPA-------KPAESAVRPL----IAQ 477
Query: 502 ALANASPEQQRTLLGESLYPLV 523
L N PE QR +LGE LYPL+
Sbjct: 478 DLENFPPETQRQMLGERLYPLM 499
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
+++ +LYV +LD ++ D +L D FS G + S ++ RD T S G+G+V + +P DA
Sbjct: 307 SKYQGVNLYVKNLDDDMDDDRLRDEFSVYGVITSAKIMRDEKTNISRGFGFVCFTSPEDA 366
Query: 85 ARALDVLNFTPLNNKSIRIMYSHRDPSIRKS 115
RA+ +N + +K I + + R +R+S
Sbjct: 367 TRAVTEMNGRIIGSKPIYVAIAQRK-EVRRS 396
>gi|297263480|ref|XP_001096930.2| PREDICTED: polyadenylate-binding protein 3 [Macaca mulatta]
Length = 592
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 248/501 (49%), Positives = 338/501 (67%), Gaps = 29/501 (5%)
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + K +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+F
Sbjct: 108 ADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAF 167
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G SKG+GFV FE +E+A+ AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 168 GNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREA 226
Query: 202 V--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
A +F NV++KN E DE LK +FG++G S V+ D GKSK FGFV+FE
Sbjct: 227 ELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVVTDESGKSKGFGFVSFERH 286
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAV+ +NGK+ + ++ YVG+AQKK ER+ ELK +FEQ ++ + ++QG+NLY+KNL
Sbjct: 287 EDARKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNL 346
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D IDDE+L++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +
Sbjct: 347 DDGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT 405
Query: 380 KPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPA 439
KPLYVA+AQRKEER+A L Q+ Q P P P PSG F+ A
Sbjct: 406 KPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGY---FM------A 456
Query: 440 IIPPQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGI-PRRDASVGQPMPITA 498
IP + A YP + Q + P P G P+ V P+TA
Sbjct: 457 AIPQT---QNRAAYYPPSQIAQ----------LRPSPRWTAQGARPQPAVHVQGQEPLTA 503
Query: 499 LSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKA 558
+ LA+A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE+L++
Sbjct: 504 --SMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPESLRS 561
Query: 559 KVAEAMEVLRSVAQQQANNPA 579
KV EA+ VL++ ++A A
Sbjct: 562 KVDEAVAVLQAHQAKEAAQKA 582
Score = 197 bits (502), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 114/291 (39%), Positives = 170/291 (58%), Gaps = 23/291 (7%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ +LD ++ + LYD FS G +LS +V D + S GYG+V++ A RA++
Sbjct: 145 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEK 202
Query: 91 LNFTPLNNKSIRI----MYSHRDPSI--RKSGTGNIFIKNLDKSIDHKALHDTFSSFGNI 144
+N LN++ + + R+ + R N++IKN + +D + L D F FG
Sbjct: 203 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPA 262
Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAI 204
LS K+ TD SG+SKGFGFV FE E A+ A+D++NG +N KQ++VG +K ER+T +
Sbjct: 263 LSVKVVTDESGKSKGFGFVSFERHEDARKAVDEMNGKELNGKQIYVGRAQKKVERQT-EL 321
Query: 205 KTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCF 251
K KF N++VKNLD+ DE L+K F +GTITSA VM +G G+SK F
Sbjct: 322 KRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG-GRSKGF 380
Query: 252 GFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAM 302
GFV F + ++A KAV +NG+ + YV AQ+K ER+ L Q+ Q M
Sbjct: 381 GFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRM 431
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 107/197 (54%), Gaps = 22/197 (11%)
Query: 21 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYAN 80
GA +F T++Y+ + ++ D +L DLF + G LSV+V D S +S G+G+V++
Sbjct: 229 GARAKEF--TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVVTDESG-KSKGFGFVSFER 285
Query: 81 PADAARALDVLNFTPLNNKSIRIMYSHR-----------------DPSIRKSGTGNIFIK 123
DA +A+D +N LN K I + + + D R G N+++K
Sbjct: 286 HEDARKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGV-NLYVK 344
Query: 124 NLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLI 183
NLD ID + L FS FG I S K+ +G G+SKGFGFV F + E A A+ ++NG ++
Sbjct: 345 NLDDGIDDERLRKEFSPFGTITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTEMNGRIV 403
Query: 184 NDKQVFVGHFLRKQERE 200
K ++V RK+ER+
Sbjct: 404 ATKPLYVALAQRKEERQ 420
>gi|392558545|gb|EIW51732.1| polyadenylate binding protein [Trametes versicolor FP-101664 SS1]
Length = 631
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 211/383 (55%), Positives = 293/383 (76%), Gaps = 2/383 (0%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVG+LD VT++ L+++F+ +G V S+RVCRD TRRSLGY YVNY N AD RAL
Sbjct: 6 SASLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERAL 65
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LN++ + ++ RIM+S RDP++RK+G GNIFIKNLD+ ID+KALHDTF++FGN+LSCK
Sbjct: 66 EQLNYSLIKGRACRIMWSQRDPALRKTGQGNIFIKNLDEQIDNKALHDTFAAFGNVLSCK 125
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKT 206
+ATD G+SKG+GFV +E E+A+ AI +NGML+NDK+V+VGH + ++ER++ +K
Sbjct: 126 VATDEHGRSKGYGFVHYETAEAAETAIKAVNGMLLNDKKVYVGHHISRKERQSKIEEMKN 185
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
+F N++VKN+D T E+ ++F +G ITSAV+ D +GKS+ FGFVNF+ ++A AV
Sbjct: 186 QFTNIYVKNVDPEVTQEEFVQLFEPFGRITSAVLQVDDEGKSRGFGFVNFDTHEEAHAAV 245
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
EAL+ R+ +V +AQKK+ERE+EL+ +EQA E + K+QG+NLYIKNL D IDDE
Sbjct: 246 EALHDSDVKGRKLFVARAQKKAEREEELRRSYEQAKMEKMSKYQGVNLYIKNLEDDIDDE 305
Query: 327 KLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 386
+L+ F FG ITS KVMRD GISKG GFV FS+P+EA++A+AEMN KMI +KPLYV++
Sbjct: 306 RLRGEFEPFGNITSAKVMRDEKGISKGFGFVCFSSPDEATKAVAEMNNKMIGTKPLYVSL 365
Query: 387 AQRKEERRARLQAQFSQMRPVAM 409
AQR+E RR +L++Q +Q + M
Sbjct: 366 AQRREVRRQQLESQIAQRNQIRM 388
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 62/94 (65%), Gaps = 5/94 (5%)
Query: 484 PRRDASVGQ-PMP----ITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGML 538
P R + GQ P P T + ALANASP +Q+ +LGE +Y + Q + + A K+TGML
Sbjct: 529 PPRGPAPGQGPAPGGEVPTITAAALANASPMEQKQMLGEVIYMKIVQSQPELAGKITGML 588
Query: 539 LEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQ 572
LEMD TE+LHLLE+P+++ KV EA+ VL +Q
Sbjct: 589 LEMDNTELLHLLETPDSMNTKVNEALAVLHEFSQ 622
>gi|348517413|ref|XP_003446228.1| PREDICTED: polyadenylate-binding protein 4 [Oreochromis niloticus]
Length = 627
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 221/375 (58%), Positives = 289/375 (77%), Gaps = 4/375 (1%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL ++T++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN++ PADA RALD
Sbjct: 12 SLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQPADAERALDT 71
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+FGNILSCK+
Sbjct: 72 MNFDVVKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVV 131
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET-VAIKTK-F 208
D +G SKG+ FV FE +++A AI+K+NGML+ND++VFVG F ++ERE + K K F
Sbjct: 132 CDENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEF 190
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NV++KN + DE LK+IF +YG S VM D GKS+ FGFV++E +DA KAVE
Sbjct: 191 TNVYIKNFGDDMDDERLKEIFDKYGKTLSVKVMTDPSGKSRGFGFVSYEKHEDANKAVEE 250
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
+NG + + + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL D+IDDEKL
Sbjct: 251 MNGTELNGKTVFVGRAQKKMERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKL 310
Query: 329 KELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ SKPLYVA+AQ
Sbjct: 311 RKEFSPFGSITSAKVMLE-EGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Query: 389 RKEERRARLQAQFSQ 403
RKEER+A L Q+ Q
Sbjct: 370 RKEERKAHLTNQYMQ 384
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 103/289 (35%), Positives = 170/289 (58%), Gaps = 16/289 (5%)
Query: 118 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAID 176
++++ +L I L++ FS G +LS ++ D + +S G+ +V F A+ A+D
Sbjct: 11 ASLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQPADAERALD 70
Query: 177 KLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTIT 236
+N ++ K + + +R+ K+ NVF+KNLD+S ++ L F +G I
Sbjct: 71 TMNFDVVKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNIL 126
Query: 237 SAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKG 296
S V+ D +G SK + FV+FE D A +A+E +NG +DR+ +VG+ + + ERE EL
Sbjct: 127 SCKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAELGA 185
Query: 297 QFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGF 356
+ ++ N+YIKN GD +DDE+LKE+F ++G S KVM DPSG S+G GF
Sbjct: 186 KAKEFT----------NVYIKNFGDDMDDERLKEIFDKYGKTLSVKVMTDPSGKSRGFGF 235
Query: 357 VAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
V++ E+A++A+ EMNG + K ++V AQ+K ER+A L+ +F Q++
Sbjct: 236 VSYEKHEDANKAVEEMNGTELNGKTVFVGRAQKKMERQAELKRKFEQLK 284
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 109/196 (55%), Gaps = 20/196 (10%)
Query: 21 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYAN 80
GA +F T++Y+ + ++ D +L ++F + G+ LSV+V D S +S G+G+V+Y
Sbjct: 184 GAKAKEF--TNVYIKNFGDDMDDERLKEIFDKYGKTLSVKVMTDPSG-KSRGFGFVSYEK 240
Query: 81 PADAARALDVLNFTPLNNKSI----------------RIMYSHRDPSIRKSGTGNIFIKN 124
DA +A++ +N T LN K++ R + I + N++IKN
Sbjct: 241 HEDANKAVEEMNGTELNGKTVFVGRAQKKMERQAELKRKFEQLKQERISRYQGVNLYIKN 300
Query: 125 LDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLIN 184
LD +ID + L FS FG+I S K+ + G+SKGFGFV F + E A A+ ++NG ++
Sbjct: 301 LDDTIDDEKLRKEFSPFGSITSAKVMLE-EGRSKGFGFVCFSSPEEATKAVTEMNGRIVG 359
Query: 185 DKQVFVGHFLRKQERE 200
K ++V RK+ER+
Sbjct: 360 SKPLYVALAQRKEERK 375
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 63/87 (72%), Gaps = 5/87 (5%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A P++Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+LES E
Sbjct: 532 PLTA--SMLAAAPPQEQKQMLGERLFPLIQAMHANLAGKITGMLLEIDNSELLHMLESHE 589
Query: 555 ALKAKVAEAMEVLRSVAQQQANNPADQ 581
+L++KV EA+ VL++ QA A Q
Sbjct: 590 SLRSKVEEAVAVLQA---HQAKKDATQ 613
>gi|242802487|ref|XP_002483981.1| polyadenylate-binding protein [Talaromyces stipitatus ATCC 10500]
gi|218717326|gb|EED16747.1| polyadenylate-binding protein [Talaromyces stipitatus ATCC 10500]
Length = 751
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 250/528 (47%), Positives = 332/528 (62%), Gaps = 75/528 (14%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
NQ + SLYVG+LD +VT++ L++LFS +GQV S+RVCRD TRRSLGY YVNY N AD
Sbjct: 45 NQPHSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADG 104
Query: 85 ARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNI 144
RAL+ LN+T + + RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++FGNI
Sbjct: 105 ERALEDLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNI 164
Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV-- 202
LSCK+A D G SKG+GFV +E E+A NAI +NGML+NDK+VFVGH + K++R++
Sbjct: 165 LSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFE 224
Query: 203 AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDA 262
+K F NV+VKN+D TDE+ +++FG+YG ITSA + RD GKS+ FGFVN+ + +A
Sbjct: 225 EMKANFTNVYVKNIDPEVTDEEFRELFGKYGDITSATISRDDSGKSRGFGFVNYVDHQNA 284
Query: 263 AKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDS 322
AV+ LN K F ++ YVG+AQKK ERE+EL+ Q+E A E K+QG+NLY+KNL D
Sbjct: 285 QSAVDELNDKDFHSQKLYVGRAQKKHEREEELRRQYEAARLEKASKYQGVNLYVKNLTDD 344
Query: 323 IDDEKLKELFSEFGTITSCKVMRDPSGI-------------------------------- 350
+DD+KL+ELFS FGTITS KVMRD G+
Sbjct: 345 VDDDKLRELFSPFGTITSAKVMRDTVGVSSDSDKEEGKEASEKEGEEASEKEETKVKAED 404
Query: 351 ----------------SKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERR 394
SKG GFV FS+P+EAS+A+ EMN +M+ KPLYVA+AQRK+ R+
Sbjct: 405 EEKTETKKPEKKVFGKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKPLYVALAQRKDVRK 464
Query: 395 ARLQAQFSQMRPV-------AMGPSVPPRMP--MYPPG-----PSGLGQQFLYGQAP-PA 439
++L+A + A G P P Y PG P+ GQ+ L G AP P
Sbjct: 465 SQLEASIQARNTIRQQQAAAAAGMPQPYMQPAVFYGPGQQGFLPANAGQRGL-GFAPQPG 523
Query: 440 IIPPQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLP---VPVDMGAGIP 484
++ + P G +YP G FP G G P +P + G GIP
Sbjct: 524 MVMAGI-PGGRPGQYPGG-----FPQQGGRGIGGPNQQIPQNFGQGIP 565
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 96/300 (32%), Positives = 159/300 (53%), Gaps = 21/300 (7%)
Query: 110 PSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENK 168
P+ + + ++++ LD S+ L + FSS G + S ++ D + +S G+ +V + N
Sbjct: 42 PNPNQPHSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNT 101
Query: 169 ESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKI 228
+ A++ LN LI + + +R+ KT NVF+KNLD + ++ L
Sbjct: 102 ADGERALEDLNYTLIKGRPCRI----MWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDT 157
Query: 229 FGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKS 288
F +G I S V +D G SK +GFV++E A+ A A++ +NG +D++ +VG K
Sbjct: 158 FAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKK 217
Query: 289 ERE---QELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMR 345
+R+ +E+K F N+Y+KN+ + DE+ +ELF ++G ITS + R
Sbjct: 218 DRQSKFEEMKANF-------------TNVYVKNIDPEVTDEEFRELFGKYGDITSATISR 264
Query: 346 DPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
D SG S+G GFV + + A A+ E+N K S+ LYV AQ+K ER L+ Q+ R
Sbjct: 265 DDSGKSRGFGFVNYVDHQNAQSAVDELNDKDFHSQKLYVGRAQKKHEREEELRRQYEAAR 324
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 57/86 (66%), Gaps = 4/86 (4%)
Query: 481 AGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLE 540
AG P A G P +T L T L+ A P+QQ+ +LGE+LYP ++ + + A K+TGMLLE
Sbjct: 639 AGAPV--APEGAPGSLT-LQT-LSAAPPQQQKQMLGEALYPKIQAQQPELAGKITGMLLE 694
Query: 541 MDQTEVLHLLESPEALKAKVAEAMEV 566
MD E+L L++ AL+AKV EA+ V
Sbjct: 695 MDNAELLGLIDDESALRAKVDEALHV 720
>gi|2393873|gb|AAB70164.1| poly(A)-binding protein testis-specific isoform [Mus musculus]
Length = 603
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 259/592 (43%), Positives = 357/592 (60%), Gaps = 78/592 (13%)
Query: 46 LYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMY 105
LY+ FS G +LS+RV RD+ TRRSLGY VN+ PADA RALD +NF + K +RIM+
Sbjct: 2 LYEKFSSAGPILSIRVYRDVITRRSLGYASVNFEQPADAERALDTMNFDVIKGKPVRIMW 61
Query: 106 SHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQF 165
S RDPS+R+SG GN+FIKNL+K+ID+KAL+DTFS+FGNILSCK+ +D +G SKG GFV F
Sbjct: 62 SQRDPSLRRSGVGNVFIKNLNKTIDNKALYDTFSAFGNILSCKVVSDENG-SKGHGFVHF 120
Query: 166 ENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET-VAIKTK-FNNVFVKNLDESTTDE 223
E +E+A+ AI+K+NGML+ND++VFVG F ++ERE + TK F NV++KN + DE
Sbjct: 121 ETEEAAERAIEKMNGMLLNDRKVFVGRFKSQKEREAELGTGTKEFTNVYIKNFGDRMDDE 180
Query: 224 DLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGK 283
L +FG +G I S VM D GKSK FGFV+FE +DA KAV+ +NGK+ + + YVG+
Sbjct: 181 TLNGLFGRFGQILSVKVMTDEGGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKHIYVGR 240
Query: 284 AQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKV 343
AQKK +R ELK +FEQ ++ ++QG+NLY+KNL D IDDE+L++ FS FGTITS KV
Sbjct: 241 AQKKDDRHTELKHKFEQVTQDKSIRYQGINLYVKNLDDGIDDERLQKEFSPFGTITSTKV 300
Query: 344 MRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQ 403
M + G SKG GFV FS+PEEA++A++EMNG+++ +KPLYVA+AQRKEER+A L Q+ Q
Sbjct: 301 MTE-GGRSKGFGFVCFSSPEEATKAVSEMNGRIVATKPLYVALAQRKEERQAHLTNQYIQ 359
Query: 404 -MRPVAMGP----------------SVPPRMPMYPPGPSGLGQ------QFLYGQAP--- 437
M V GP +VP P PS + Q G P
Sbjct: 360 RMASVRSGPNPVNPYQPASSSYSVAAVPQTQNCVPCCPSQIAQPRPSARWIAQGSRPHPF 419
Query: 438 ---PAIIPPQMPPRGHAYRYPLGRNMQ----------------DFPFDMGAGSMLPVPVD 478
P I P P P ++Q P + + PV
Sbjct: 420 PNVPGAIHPAAPRSSLTTVRPSSSHVQVTTAHRITNTSAQITGQRPAPASSATATPV--- 476
Query: 479 MGAGIPRRDASVG--------------QPM-------PITALSTALANASPEQQRTLLGE 517
IP+ + G QP P TA ++ +P++ + +LGE
Sbjct: 477 --HSIPQYKYAAGVQNSQQHLNAQLAQQPAVCIQGQEPWTA---SMLVTAPQEPKQMLGE 531
Query: 518 SLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRS 569
L+PL++ + A K+TGMLL++D +E L +LESP + ++ EA+ L++
Sbjct: 532 RLFPLIQAMHPTLAGKITGMLLDIDNSEPLRMLESPVSRCSRAEEAVATLQA 583
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 110/291 (37%), Positives = 167/291 (57%), Gaps = 23/291 (7%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ +L+ + + LYD FS G +LS +V D + S G+G+V++ A RA++
Sbjct: 75 NVFIKNLNKTIDNKALYDTFSAFGNILSCKVVSDENG--SKGHGFVHFETEEAAERAIEK 132
Query: 91 LNFTPLNNKSIRI-MYSHRDPSIRKSGTG-----NIFIKNLDKSIDHKALHDTFSSFGNI 144
+N LN++ + + + + + GTG N++IKN +D + L+ F FG I
Sbjct: 133 MNGMLLNDRKVFVGRFKSQKEREAELGTGTKEFTNVYIKNFGDRMDDETLNGLFGRFGQI 192
Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAI 204
LS K+ TD G+SKGFGFV FE E AQ A+D++NG +N K ++VG +K +R T +
Sbjct: 193 LSVKVMTDEGGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKHIYVGRAQKKDDRHT-EL 251
Query: 205 KTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCF 251
K KF N++VKNLD+ DE L+K F +GTITS VM +G G+SK F
Sbjct: 252 KHKFEQVTQDKSIRYQGINLYVKNLDDGIDDERLQKEFSPFGTITSTKVMTEG-GRSKGF 310
Query: 252 GFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAM 302
GFV F + ++A KAV +NG+ + YV AQ+K ER+ L Q+ Q M
Sbjct: 311 GFVCFSSPEEATKAVSEMNGRIVATKPLYVALAQRKEERQAHLTNQYIQRM 361
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 104/188 (55%), Gaps = 20/188 (10%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
T++Y+ + + D L LF + GQ+LSV+V D +S G+G+V++ DA +A+D
Sbjct: 166 TNVYIKNFGDRMDDETLNGLFGRFGQILSVKVMTDEGG-KSKGFGFVSFERHEDAQKAVD 224
Query: 90 VLNFTPLNNKSIRIMYSHR-----------------DPSIRKSGTGNIFIKNLDKSIDHK 132
+N LN K I + + + D SIR G N+++KNLD ID +
Sbjct: 225 EMNGKELNGKHIYVGRAQKKDDRHTELKHKFEQVTQDKSIRYQGI-NLYVKNLDDGIDDE 283
Query: 133 ALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGH 192
L FS FG I S K+ T+G G+SKGFGFV F + E A A+ ++NG ++ K ++V
Sbjct: 284 RLQKEFSPFGTITSTKVMTEG-GRSKGFGFVCFSSPEEATKAVSEMNGRIVATKPLYVAL 342
Query: 193 FLRKQERE 200
RK+ER+
Sbjct: 343 AQRKEERQ 350
>gi|260815191|ref|XP_002602357.1| hypothetical protein BRAFLDRAFT_234358 [Branchiostoma floridae]
gi|229287666|gb|EEN58369.1| hypothetical protein BRAFLDRAFT_234358 [Branchiostoma floridae]
Length = 620
Score = 457 bits (1175), Expect = e-125, Method: Compositional matrix adjust.
Identities = 225/425 (52%), Positives = 302/425 (71%), Gaps = 11/425 (2%)
Query: 24 GNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPAD 83
G + SLYVGDLD ++T++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ PAD
Sbjct: 6 GPTYPCASLYVGDLDPDITEAMLYEKFSPAGPVLSIRVCRDMVTRRSLGYAYVNFQQPAD 65
Query: 84 AARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGN 143
A RALD +NF + K +RIM+S RDPS+RKSG GN+FIKNLDKSID+KA++DTFS+FGN
Sbjct: 66 AERALDTMNFDTIKGKPMRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAIYDTFSAFGN 125
Query: 144 ILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV- 202
ILSCK+A D +G SKGFGFV FE +E+A A+ K+NGM++N K+V+VG F+ + ER
Sbjct: 126 ILSCKVAQDETGSSKGFGFVHFETQEAADEAMAKVNGMMLNGKKVYVGRFVPRSERLAAM 185
Query: 203 -AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADD 261
+ +F N++VKN + D+ L+ F +YG + SA VM D G S+ FGFV++E D
Sbjct: 186 GEAQKRFTNIYVKNFGDKWDDDKLRDFFEKYGKVVSAKVMTDDMGHSRGFGFVSYEEPDS 245
Query: 262 AAKAVEALNGKKFDD-REWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
A KA E +N + DD R YVG+AQKK+ER+ ELK +FE+ +E + ++QG+NLY+KNL
Sbjct: 246 AGKACEEMNDMEVDDGRRIYVGRAQKKAERQAELKAKFEKIKQERIQRYQGVNLYVKNLD 305
Query: 321 DSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSK 380
+ID+E L++ FS+FGTITS KVM + +G SKG GFV FS+PEEA++A+ EMNG+++VSK
Sbjct: 306 STIDEEILRKEFSQFGTITSSKVMTE-NGRSKGFGFVCFSSPEEATKAVTEMNGRIVVSK 364
Query: 381 PLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAI 440
PLYVA+AQRKE+R+A+L +Q+ Q R M RMP P G + P
Sbjct: 365 PLYVALAQRKEDRKAQLASQYMQ-RMAGM------RMPAPQPNQMFQGSSYFMPSMQPRY 417
Query: 441 IPPQM 445
P QM
Sbjct: 418 FPSQM 422
>gi|297283068|ref|XP_001113342.2| PREDICTED: polyadenylate-binding protein 4 [Macaca mulatta]
Length = 657
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 235/425 (55%), Positives = 304/425 (71%), Gaps = 29/425 (6%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+ + + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G SKG+ FV FE +E+A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 202 -VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ K K F NV++KN E DE LK++F + S VMRD GKSK FGFV++E
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSK---TLSVKVMRDPSGKSKGFGFVSYEKH 238
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAVE +NGK+ + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL
Sbjct: 239 EDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNL 298
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ S
Sbjct: 299 DDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 357
Query: 380 KPLYVAVAQRKEERRARLQAQF----------------SQMRPVAMG---PSVPP---RM 417
KPLYVA+AQRKEER+A L Q+ +Q +P A G P+VP R
Sbjct: 358 KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP 417
Query: 418 PMYPP 422
P Y P
Sbjct: 418 PYYTP 422
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 60/75 (80%), Gaps = 2/75 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A P++Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 566 PLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPE 623
Query: 555 ALKAKVAEAMEVLRS 569
+L++KV EA+ VL++
Sbjct: 624 SLRSKVDEAVAVLQA 638
>gi|346974495|gb|EGY17947.1| polyadenylate-binding protein [Verticillium dahliae VdLs.17]
Length = 759
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 273/700 (39%), Positives = 382/700 (54%), Gaps = 156/700 (22%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVG+L+ VT++ L++LFS +G V S+RVCRD TRRSLGY YVNY +D +AL
Sbjct: 60 SASLYVGELEPQVTEAMLFELFSHIGPVASIRVCRDAVTRRSLGYAYVNYNTTSDGEKAL 119
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LN+T +N + RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++FGNILSCK
Sbjct: 120 EELNYTVINGRPCRIMWSQRDPALRKNGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCK 179
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKT 206
+A D G SKG+GFV +E E+A AI +NGML+N+K+V+VGH + K++R++ +K
Sbjct: 180 VAQDEHGNSKGYGFVHYETDEAAAQAIKHVNGMLLNEKKVYVGHHIPKKDRQSKFEEMKA 239
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
F NV+VKN++ +D++ + +F +YG +TS+ + RD +GKS+ FGFVNF + A++AV
Sbjct: 240 NFTNVYVKNINSEASDDEFRDLFTKYGEVTSSSLARDQEGKSRGFGFVNFTTHEAASQAV 299
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
E LNGK F ++ YVG+AQKK ERE+EL+ +E A +E +K+QG+NLYIKNL D +DDE
Sbjct: 300 EELNGKDFRGQDLYVGRAQKKHEREEELRKSYEAARQEKANKYQGVNLYIKNLSDDVDDE 359
Query: 327 KLKELFSEFGTITSCKVMRDPS-------------------------------------- 348
KL+ +FSEFG ITS KVMRD
Sbjct: 360 KLRAMFSEFGPITSAKVMRDSISEGEDEEKAEEETPAPEAEVKKEDSEADADSQEAADKK 419
Query: 349 ---------GISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQA 399
G SKG GFV FS PE+A++A+A+MN +MI +KPLYVA+AQRK+ R+ +L+
Sbjct: 420 DAKKGDKKLGKSKGFGFVCFSNPEDATKAVADMNQRMIDNKPLYVALAQRKDVRKNQLEQ 479
Query: 400 QF---SQMR-----------------PV-------------AMGPSVPPRMPM------- 419
+QMR PV G PP M M
Sbjct: 480 SIQARNQMRMQSAAAQAGMPNQFMQQPVYFPGQQPGFLPQGGRGMPFPPNMGMPNIQGGR 539
Query: 420 ---YPPGPSGLGQQFLYGQAPPAI--IPPQMPPRGHAYRYPLGRNMQDF----------- 463
YP G G + + Q PP + +P Q PP G +P N F
Sbjct: 540 PGQYPAGFPQQGGRGIPQQLPPNMYGVPGQFPPGG----FPAQANNPQFMAAMQQVQQAS 595
Query: 464 -----------PFD-MGAGSMLP---------------------------VPVDMGAGIP 484
P M AG M P P G G P
Sbjct: 596 MGGGRGQGGRGPMQGMPAGPMGPGAPGYPPNRQQPGQAGGRGGRNGQQGNFPPQGGRGAP 655
Query: 485 RRDASVGQPMP---ITALSTALANAS-PEQQRTLLGESLYPLVEQLERDAAAKVTGMLLE 540
G+ P ++A+ L NA+ QQ+ ++GE ++P + + + A K+TGMLLE
Sbjct: 656 ----GAGENTPPQGLSAIQLQLNNATDARQQKQIIGELIFPKIAAQQPELAGKITGMLLE 711
Query: 541 MDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNPAD 580
M+ +E++ L+E A+K KV EA+ V + Q D
Sbjct: 712 MENSELITLIEDDNAMKLKVDEALGVYEEYVKNQGTEEDD 751
>gi|241948533|ref|XP_002416989.1| ARS consensus binding protein, putative; poly(A)-binding protein,
putative; polyadenylate tail-binding protein, putative;
polyadenylate-binding protein, cytoplasmic and nuclear,
putative [Candida dubliniensis CD36]
gi|223640327|emb|CAX44577.1| ARS consensus binding protein, putative [Candida dubliniensis CD36]
Length = 627
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 264/595 (44%), Positives = 372/595 (62%), Gaps = 36/595 (6%)
Query: 17 GVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYV 76
G ++G + N + SLYVG+L+ +V ++ L+++FS +GQV S+RVCRD +++SLGY YV
Sbjct: 41 GESSGVAEN---SASLYVGELNPSVNEATLFEIFSPIGQVSSIRVCRDAVSKKSLGYAYV 97
Query: 77 NYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHD 136
NY D +A++ LN+TP+ + RIM+S RDPS R+SG GNIFIKNL +ID+KALHD
Sbjct: 98 NYHKYEDGEKAIEELNYTPIEGRPCRIMWSQRDPSARRSGDGNIFIKNLHPAIDNKALHD 157
Query: 137 TFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRK 196
TFS+FG ILSCK+A D GQSK FGFV +E E+A+ AI+ +NGML+ND++VFVG + K
Sbjct: 158 TFSAFGKILSCKVAADEFGQSKCFGFVHYETAEAAEAAIENVNGMLLNDREVFVGKHISK 217
Query: 197 QERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFV 254
++RE+ +K F N++VKN+D + ++E +K+F YG ITS + +D DGKSK FGFV
Sbjct: 218 KDRESKFEEMKANFTNIYVKNIDLNYSEESFEKLFAPYGKITSIYLEKDQDGKSKGFGFV 277
Query: 255 NFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNL 314
NFEN D A KAVE LN K+ + ++ YVG+AQKK ER +ELK Q+E A E + K+QG+NL
Sbjct: 278 NFENHDSAVKAVEELNDKEINGQKIYVGRAQKKRERLEELKKQYEAARLEKLAKYQGVNL 337
Query: 315 YIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNG 374
++KNL D+ID EKL+E F FGTITS KVM D +G SKG GFV F+TPEEA++A+ EMN
Sbjct: 338 FVKNLDDAIDSEKLEEEFKSFGTITSAKVMVDDAGKSKGFGFVCFTTPEEATKAITEMNT 397
Query: 375 KMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLY- 433
+MI KPLYVA+AQRK+ RR++L+ Q + M + +P P GQQ +
Sbjct: 398 RMINGKPLYVALAQRKDVRRSQLEQQIQARNQMRMQNAAAGGLPGQFMPPMFYGQQGFFP 457
Query: 434 ----GQAPPAIIPPQMPPRGHAYRYPL-----GRNMQDFPF---------DMGAGSMLPV 475
G AP PQM RG +P G N Q P D +M P
Sbjct: 458 PNGRGNAPYPGPNPQMMMRGRGQPFPEQWPRPGPNGQPVPVYGIPPQFQQDFNGQNMRPQ 517
Query: 476 PVDM---GAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLV----EQLER 528
G P R+ + + L+ +++ +QQ+ +LGE LYP + + E
Sbjct: 518 QQQQQPRGGYYPNRNQTNKR-----DLAAIISSVPQDQQKRILGEELYPKIVATGKAQEP 572
Query: 529 DAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNPADQLA 583
+AA K+TGM+L ++ E+L LL+ E +A+ + +A A++ A
Sbjct: 573 EAAGKITGMMLGLENQEILDLLDDDELFNNHFEDALTAFEEYKKSEAAGNAEEQA 627
>gi|366987097|ref|XP_003673315.1| hypothetical protein NCAS_0A03680 [Naumovozyma castellii CBS 4309]
gi|342299178|emb|CCC66926.1| hypothetical protein NCAS_0A03680 [Naumovozyma castellii CBS 4309]
Length = 575
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 255/554 (46%), Positives = 346/554 (62%), Gaps = 50/554 (9%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVG+LD V+++ LYD+FS +G V S+RVCRD T+ SLGY YVN+ + +A++
Sbjct: 36 SLYVGELDPTVSEALLYDIFSPIGSVSSIRVCRDAVTKTSLGYAYVNFNDHEAGKKAIEQ 95
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
LN+TP+ + RIM+S RDP++RK G+GNIFIKNL ID+KAL +TFS FGNILS KIA
Sbjct: 96 LNYTPIKGRLCRIMWSQRDPALRKKGSGNIFIKNLHPDIDNKALFETFSVFGNILSSKIA 155
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK--F 208
TD +G+SKGFGFV FE++ SA+ AID LNGML+N ++++V L ++ER++ +TK F
Sbjct: 156 TDETGKSKGFGFVHFEHESSAKEAIDALNGMLLNGQEIYVAPHLTRKERDSQLEETKAHF 215
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NV+VKN++ TTDE+ ++F +YG + S+ + + DGK K FGFV+FE +DAAKAVE
Sbjct: 216 TNVYVKNINLETTDEEFNELFAKYGNVLSSSLEKTEDGKLKGFGFVDFEKHEDAAKAVEE 275
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
LNG +F D+ +V +AQKK ER QELK Q+E + E + K+QG+NL++KNL DSIDDEKL
Sbjct: 276 LNGTEFKDQTLFVSRAQKKYERMQELKKQYEASRLEKMAKYQGVNLFVKNLDDSIDDEKL 335
Query: 329 KELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
KE F+ +GTITS +VMR +G SKG GFV FSTPEEA++A+ E N +++ KPLYVA+AQ
Sbjct: 336 KEEFAPYGTITSVRVMRTDNGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQ 395
Query: 389 RKEERRARLQAQF---SQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPPQM 445
RK+ RR++L Q +QMR + P GQ P + M
Sbjct: 396 RKDVRRSQLAQQIQARTQMRYQQATAAAAAAAAGIP------------GQFMPPMFYGVM 443
Query: 446 PPRGHAYRYPLGRNMQDFP---FDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALSTA 502
PPRG + P + M P F G G +P G PR
Sbjct: 444 PPRGVPFNGPNPQQMNGVPPQQFRNGPGYGMPPQ----GGFPR----------------- 482
Query: 503 LANASPEQ-----QRTLLGESLYPLV--EQLERDAAAKVTGMLLEMDQTEVLHLLESPEA 555
N P Q QR LGE LY V + + +AA K+TGM+L++ EV+ LLE+ E
Sbjct: 483 --NGVPNQFYQKNQRQALGEELYKKVSAKNADEEAAGKITGMILDLPPQEVVSLLENDEL 540
Query: 556 LKAKVAEAMEVLRS 569
+ EA S
Sbjct: 541 FEQHFKEASAAYES 554
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 98/188 (52%), Gaps = 17/188 (9%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
T++YV +++ TD + +LF++ G VLS + + + G+G+V++ DAA+A++
Sbjct: 216 TNVYVKNINLETTDEEFNELFAKYGNVLSSSLEKTEDGKLK-GFGFVDFEKHEDAAKAVE 274
Query: 90 VLNFTPLNNKSIRIMYSH----------------RDPSIRKSGTGNIFIKNLDKSIDHKA 133
LN T ++++ + + R + K N+F+KNLD SID +
Sbjct: 275 ELNGTEFKDQTLFVSRAQKKYERMQELKKQYEASRLEKMAKYQGVNLFVKNLDDSIDDEK 334
Query: 134 LHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHF 193
L + F+ +G I S ++ +G+SKGFGFV F E A AI + N ++ K ++V
Sbjct: 335 LKEEFAPYGTITSVRVMRTDNGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIA 394
Query: 194 LRKQERET 201
RK R +
Sbjct: 395 QRKDVRRS 402
>gi|148229527|ref|NP_001085857.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Xenopus
laevis]
gi|49118872|gb|AAH73435.1| MGC80927 protein [Xenopus laevis]
Length = 626
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 224/375 (59%), Positives = 287/375 (76%), Gaps = 4/375 (1%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ PADA RALD
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+FGNILSCK+
Sbjct: 72 MNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVV 131
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET-VAIKTK-F 208
D +G SKG+ FV FE +++A AI+K+NGML+ND++VFVG F ++ERE + K K F
Sbjct: 132 CDENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKCRREREAELGAKAKEF 190
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NV++KN E DE LK+ F +YG S VM D GKSK FGFV+FE +DA KAV+
Sbjct: 191 TNVYIKNFGEDMDDERLKETFSKYGKTLSVKVMTDPSGKSKGFGFVSFERHEDANKAVDD 250
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
+NGK + + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL D+IDDEKL
Sbjct: 251 MNGKDVNGKIMFVGRAQKKVERQAELKRRFEQLKQERISRYQGVNLYIKNLDDTIDDEKL 310
Query: 329 KELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ SKPLYVA+AQ
Sbjct: 311 RKEFSPFGSITSAKVMLE-EGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Query: 389 RKEERRARLQAQFSQ 403
RKEER+A L Q+ Q
Sbjct: 370 RKEERKAHLTNQYMQ 384
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 108/199 (54%), Gaps = 26/199 (13%)
Query: 21 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYAN 80
GA +F T++Y+ + ++ D +L + FS+ G+ LSV+V D S +S G+G+V++
Sbjct: 184 GAKAKEF--TNVYIKNFGEDMDDERLKETFSKYGKTLSVKVMTDPSG-KSKGFGFVSFER 240
Query: 81 PADAARALDVLNFTPLNNKSIRIMYSHR-------------------DPSIRKSGTGNIF 121
DA +A+D +N +N K IM+ R I + N++
Sbjct: 241 HEDANKAVDDMNGKDVNGK---IMFVGRAQKKVERQAELKRRFEQLKQERISRYQGVNLY 297
Query: 122 IKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGM 181
IKNLD +ID + L FS FG+I S K+ + G+SKGFGFV F + E A A+ ++NG
Sbjct: 298 IKNLDDTIDDEKLRKEFSPFGSITSAKVMLE-EGRSKGFGFVCFSSPEEATKAVTEMNGR 356
Query: 182 LINDKQVFVGHFLRKQERE 200
++ K ++V RK+ER+
Sbjct: 357 IVGSKPLYVALAQRKEERK 375
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 68/99 (68%), Gaps = 2/99 (2%)
Query: 471 SMLPVPVDMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDA 530
+ P+PV P+ V P+TA + LA+A P++Q+ +LGE L+PL++ +
Sbjct: 512 TRCPLPVVQPLQAPQPAVHVQGQEPLTA--SMLASAPPQEQKQMLGERLFPLIQAMHPSL 569
Query: 531 AAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRS 569
A K+TGMLLE+D +E+LH+LESPE+L++KV EA+ VL++
Sbjct: 570 AGKITGMLLEIDNSELLHMLESPESLRSKVEEAVAVLQA 608
>gi|37681851|gb|AAQ97803.1| poly(A)-binding protein, cytoplasmic 1 [Danio rerio]
Length = 620
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 220/399 (55%), Positives = 294/399 (73%), Gaps = 9/399 (2%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
+ G + SLYVGDL +VT++ LY FS GQ++S+RVCRD+ TRRSLGY Y+N+ P
Sbjct: 3 SGGPAYPLASLYVGDLHADVTEAMLYQKFSPAGQIMSIRVCRDVITRRSLGYAYINFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA ALD +N+ + + IRIM+S RDP +RKSG GNIFIKN+D+SID+KAL+DTFS+F
Sbjct: 63 ADAECALDTMNYEVIKGRPIRIMWSQRDPGLRKSGVGNIFIKNMDESIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G SKG+GFV FE +E+A AI+ +NGML+ND++VFVGHF ++ERE
Sbjct: 123 GNILSCKVVCDENG-SKGYGFVHFETQEAANRAIETMNGMLLNDRKVFVGHFKSRKEREA 181
Query: 202 V--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
A +F NV++KN E E LK IF E+G S VM D G+S+ FGFVNF N
Sbjct: 182 EMGAKAVEFTNVYIKNFGEDIDSEKLKNIFTEFGKTLSVCVMTDERGRSRGFGFVNFVNH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
DA +AV +NGK+ + R YVG+AQK+ ER+ ELK +FEQ +E + ++QG+NLY+KNL
Sbjct: 242 GDARRAVTEMNGKELNGRVLYVGRAQKRLERQGELKRKFEQIKQERIQRYQGVNLYVKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
DSIDDEKL++ F+ +GTITS KVM D G S+G GFV FS+PEEA++A+ EMNG+++ +
Sbjct: 302 DDSIDDEKLRKEFAPYGTITSAKVMTD-GGHSRGFGFVCFSSPEEATKAVTEMNGRIVST 360
Query: 380 KPLYVAVAQRKEERRARLQAQFSQ----MRPVAMGPSVP 414
KPLYVA+AQRKEER+A L Q+ Q +R + GP++P
Sbjct: 361 KPLYVALAQRKEERKAILTNQYIQRLASIRAIP-GPAIP 398
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 186/573 (32%), Positives = 287/573 (50%), Gaps = 95/573 (16%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ ++D ++ + LYD FS G +LS +V D + S GYG+V++ A RA++
Sbjct: 100 NIFIKNMDESIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAANRAIET 157
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTG-------NIFIKNLDKSIDHKALHDTFSSFGN 143
+N LN++ + + + + R++ G N++IKN + ID + L + F+ FG
Sbjct: 158 MNGMLLNDRKVFVGH-FKSRKEREAEMGAKAVEFTNVYIKNFGEDIDSEKLKNIFTEFGK 216
Query: 144 ILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVA 203
LS + TD G+S+GFGFV F N A+ A+ ++NG +N + ++VG ++ ER+
Sbjct: 217 TLSVCVMTDERGRSRGFGFVNFVNHGDARRAVTEMNGKELNGRVLYVGRAQKRLERQG-E 275
Query: 204 IKTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKC 250
+K KF N++VKNLD+S DE L+K F YGTITSA VM DG G S+
Sbjct: 276 LKRKFEQIKQERIQRYQGVNLYVKNLDDSIDDEKLRKEFAPYGTITSAKVMTDG-GHSRG 334
Query: 251 FGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQ 310
FGFV F + ++A KAV +NG+ + YV AQ R++E K
Sbjct: 335 FGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALAQ----RKEERKAIL------------ 378
Query: 311 GLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALA 370
N YI+ L +I + P+ +GSG+ S P+ S A
Sbjct: 379 -TNQYIQRLA----------------SIRAIPGPAIPTTYQQGSGYYMTSVPQVRSFYNA 421
Query: 371 EMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQM----RPVAMGPSVPPRMPMYP----- 421
N + P + + A R + AQF + RP +V P
Sbjct: 422 VPN---LRPAPRWASQAPRTQ---GPFPAQFVRQAVPRRPSTTISTVRQASTQVPHINNT 475
Query: 422 PGPSGLGQQFLYGQAPPAIIPPQMPPRGHA-YRYPLG-RNMQDFPFDMGAGSMLPVPVDM 479
+ +G Q G+A + RG + Y+Y G RN+Q + A P PV +
Sbjct: 476 QRMANIGTQTAGGRAAGTAV------RGVSQYKYSAGVRNVQQV---INA----PAPV-V 521
Query: 480 GAGIPRRDASV---GQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTG 536
+ + +V GQ P+TA + LA A ++Q+ LLGE LYPL++ L A K+TG
Sbjct: 522 HQVVQNTEPAVHMKGQE-PLTA--SMLAAAPLKEQKQLLGERLYPLIQILHPALAGKITG 578
Query: 537 MLLEMDQTEVLHLLESPEALKAKVAEAMEVLRS 569
MLLE+D +E+LH+LESPE+L AKV EA+ VL++
Sbjct: 579 MLLEIDNSELLHMLESPESLHAKVEEAVAVLQA 611
>gi|354544113|emb|CCE40835.1| hypothetical protein CPAR2_108740 [Candida parapsilosis]
Length = 650
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 257/567 (45%), Positives = 353/567 (62%), Gaps = 65/567 (11%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVG+L+ +V ++ L+++FS +GQV S+RVCRD T++SLGY YVNY D +A+
Sbjct: 62 SASLYVGELNPSVNEATLFEIFSPIGQVSSIRVCRDAVTKKSLGYAYVNYHKFEDGEKAI 121
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
D LN++ + + RIM+S RDPS R+SG GNIFIKNL +ID+KALHDTFS+FG ILSCK
Sbjct: 122 DELNYSLVEGRPCRIMWSQRDPSARRSGDGNIFIKNLHPAIDNKALHDTFSAFGRILSCK 181
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKT 206
+ATD GQSK FGFV +E E+A+ AI+ +NGML+ND++VFVG + K++RE+ +K
Sbjct: 182 VATDDMGQSKCFGFVHYETGEAAEAAIENVNGMLLNDREVFVGKHVSKKDRESKFEEMKA 241
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
+ N++VKN+D T+++ +++F YG ITS + +D DGKSK FGFVN+E A AV
Sbjct: 242 NYTNIYVKNIDLGFTEKEFEELFAPYGKITSIYLEKDQDGKSKGFGFVNYEEHKSAVDAV 301
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
EALN K+ + ++ YVG+AQKK ER +ELK Q+E E + K+QG+NL+IKNL D ID E
Sbjct: 302 EALNDKEINGQKIYVGRAQKKRERTEELKKQYEAIRLEKLSKYQGVNLFIKNLDDQIDSE 361
Query: 327 KLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 386
KL+E F FGTITS KVM D +G SKG GFV FSTPEEA++A+ EMN +MI KPLYVA+
Sbjct: 362 KLEEEFKPFGTITSAKVMVDDAGKSKGFGFVCFSTPEEATKAITEMNQRMINGKPLYVAL 421
Query: 387 AQRKEERRARLQAQFS-----QMRPVAMGPSVPPRM--PMYPPGPSGLGQQFLY-----G 434
AQRK+ RR++L+ Q +M+ A P + PMY GQQ + G
Sbjct: 422 AQRKDVRRSQLEQQIQARNQMRMQNAAAAGGFPGQFMPPMY------YGQQGFFPPGGRG 475
Query: 435 QAPPAIIP-PQMPPRGHAYRYPLGRNMQDFP--FDMGAGSMLPVPVDMGAGIPRRD---- 487
A P P PQM R G+ Q FP + + PVPV GIP +
Sbjct: 476 NAAPFPGPNPQMMMR-------RGQPGQPFPEQWPRPGPNGQPVPV---YGIPPQFQDQR 525
Query: 488 ------------------------ASVGQPMPITALSTALANASPEQQRTLLGESLYPLV 523
G +P L+ +++ PEQQ+ +LGE LYP +
Sbjct: 526 AQQQQQQQQQPQQPQQQQQRGYYPGQAGVKVPAKELAAIISSVPPEQQKRILGEELYPRI 585
Query: 524 ----EQLERDAAAKVTGMLLEMDQTEV 546
+ E +AA K+TGM+L ++ E+
Sbjct: 586 VATGKAQEPEAAGKITGMMLGLENQEI 612
>gi|258565691|ref|XP_002583590.1| polyadenylate-binding protein [Uncinocarpus reesii 1704]
gi|237907291|gb|EEP81692.1| polyadenylate-binding protein [Uncinocarpus reesii 1704]
Length = 765
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 283/699 (40%), Positives = 383/699 (54%), Gaps = 142/699 (20%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVG+LD +VT++ L++LFS +GQV S+RVCRD TRRSLGY YVNY N AD RAL
Sbjct: 53 SASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERAL 112
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LN+T + + RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++FGNILSCK
Sbjct: 113 EDLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILSCK 172
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKT 206
+A D G SKG+GFV +E E+AQNAI +NGML+NDK+VFVGH + K++R++ +K
Sbjct: 173 VAQDEFGNSKGYGFVHYETAEAAQNAIKHVNGMLLNDKKVFVGHHIAKKDRQSKFEEMKA 232
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGD-GKSKCFGFVNFENADDAAKA 265
F NV+VKN+D+ TTDE+ +++F ++G ITSA + RD + GKS+ FGFVNF + + AA A
Sbjct: 233 NFTNVYVKNIDQDTTDEEFRELFEKFGEITSATLARDSESGKSRGFGFVNFTSHESAAAA 292
Query: 266 VEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDD 325
V+ LN K F ++ YVG+AQKK ERE+EL+ Q+E A E K+QG+NLYIKNL D IDD
Sbjct: 293 VDNLNEKDFKSQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQGVNLYIKNLSDDIDD 352
Query: 326 ---------------------------------------------EKLKELFSEFGTITS 340
E+ K+ +E
Sbjct: 353 EKLRDLFSGYGTITSAKVMRDNLAAESSSDSEKEAKSEGKENEPPEESKDEAAEKAETKD 412
Query: 341 CKVMRDPS--------GISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEE 392
K + S G SKG GFV FS+P+EAS+A+ EMN +M+ KPLYVA+AQRK+
Sbjct: 413 TKEAKTESKKADKKLLGKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKPLYVALAQRKDV 472
Query: 393 RRARLQAQFSQMR---------------------PVAMGPS----VPPR---MPMYPPG- 423
RR++L+A Q R PV GP +P + MP PG
Sbjct: 473 RRSQLEASI-QARNTIRQQQAAAAAGMPQPFMQPPVFYGPGQQNFLPNQRGGMPFQQPGM 531
Query: 424 -----PSGL--------GQQFLYGQAPPAIIPPQ--------MP-------PRGHAY--- 452
P G GQQ G P IPP +P P G Y
Sbjct: 532 VIPQMPGGRHGQFSGFPGQQGGRGMNPNQQIPPNAYGLGAQGLPISMQGGMPNGLNYPQM 591
Query: 453 ---RYPLGRNMQDFPFDMG----AGSMLP-------VPVDMGAGIPRRDASVGQPMPI-- 496
+ P GR P G M P +P+ G G P + P
Sbjct: 592 AQVQAPFGRGRGQVPAVQGMPPNVQGMGPNAQFGRGMPMQQGMGRPGQAGRGQGPAQAAG 651
Query: 497 --------TALSTALANASP-EQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVL 547
+ L+ + NA+P QQ+ +LGE++YP + + + A K+TGMLLEMD E+L
Sbjct: 652 QRDETSSPSGLTLQMLNAAPPAQQKQMLGEAIYPKIHAHQPELAGKITGMLLEMDNAELL 711
Query: 548 HLLESPEALKAKVAEAMEVLRSVAQQQANNPADQLASLS 586
L++ ALKAKV EA+ V + + + D +S
Sbjct: 712 ALVDDDTALKAKVDEALTVYDEYVKNKGSESGDAAPDVS 750
>gi|126330205|ref|XP_001365269.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Monodelphis
domestica]
Length = 630
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 222/383 (57%), Positives = 290/383 (75%), Gaps = 4/383 (1%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
+ + + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ PA
Sbjct: 4 AASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPA 63
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
DA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+FG
Sbjct: 64 DAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET- 201
NILSCK+ D +G SKG+ FV FE +++A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 124 NILSCKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Query: 202 VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
+ K K F NV++KN + D LK++F +YG S VM D GKSK FGFV+FE +
Sbjct: 183 LGAKAKEFTNVYIKNFGDDMDDGRLKELFSKYGKTLSVKVMTDPSGKSKGFGFVSFEKHE 242
Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
DA KAVE +NGK + + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL
Sbjct: 243 DANKAVEEMNGKDINGKMVFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLD 302
Query: 321 DSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSK 380
D+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+P+EA++A+ EMNG+++ SK
Sbjct: 303 DTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPDEATKAVTEMNGRIVGSK 361
Query: 381 PLYVAVAQRKEERRARLQAQFSQ 403
PLYVA+AQRKEER+A L Q+ Q
Sbjct: 362 PLYVALAQRKEERKAHLTNQYMQ 384
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 464 PFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLV 523
P+ A P P P+ V P+TA + LA A P++Q+ +LGE L+PL+
Sbjct: 509 PYKYAANVRSPHPAIQPLQTPQPAVHVQGQEPLTA--SMLAAAPPQEQKQMLGERLFPLI 566
Query: 524 EQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRS 569
+ + + A K+TGMLLE+D +E+LH+LESPE+L++KV EA+ VL++
Sbjct: 567 QTMHNNLAGKITGMLLEIDNSELLHMLESPESLRSKVEEAVAVLQA 612
>gi|41054151|ref|NP_956133.1| polyadenylate-binding protein 1-like [Danio rerio]
gi|27881953|gb|AAH44513.1| Zgc:55855 [Danio rerio]
gi|182890236|gb|AAI65470.1| Zgc:55855 protein [Danio rerio]
Length = 620
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 220/399 (55%), Positives = 294/399 (73%), Gaps = 9/399 (2%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
+ G + SLYVGDL +VT++ LY FS GQ++S+RVCRD+ TRRSLGY Y+N+ P
Sbjct: 3 SGGPAYPLASLYVGDLHADVTEAMLYQKFSPAGQIMSIRVCRDVITRRSLGYAYINFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA ALD +N+ + + IRIM+S RDP +RKSG GNIFIKN+D+SID+KAL+DTFS+F
Sbjct: 63 ADAECALDTMNYEVIKGRPIRIMWSQRDPGLRKSGVGNIFIKNMDESIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G SKG+GFV FE +E+A AI+ +NGML+ND++VFVGHF ++ERE
Sbjct: 123 GNILSCKVVCDENG-SKGYGFVHFETQEAANRAIETMNGMLLNDRKVFVGHFKSRKEREA 181
Query: 202 V--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
A +F NV++KN E E LK IF E+G S VM D G+S+ FGFVNF N
Sbjct: 182 EMGAKAVEFTNVYIKNFGEDIDSEKLKNIFTEFGKTLSVCVMTDERGRSRGFGFVNFVNH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
DA +AV +NGK+ + R YVG+AQK+ ER+ ELK +FEQ +E + ++QG+NLY+KNL
Sbjct: 242 GDARRAVTEMNGKELNGRVLYVGRAQKRLERQGELKRKFEQIKQERIQRYQGVNLYVKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
DSIDDEKL++ F+ +GTITS KVM D G S+G GFV FS+PEEA++A+ EMNG+++ +
Sbjct: 302 DDSIDDEKLRKEFAPYGTITSAKVMTD-GGHSRGFGFVCFSSPEEATKAVTEMNGRIVST 360
Query: 380 KPLYVAVAQRKEERRARLQAQFSQ----MRPVAMGPSVP 414
KPLYVA+AQRKEER+A L Q+ Q +R + GP++P
Sbjct: 361 KPLYVALAQRKEERKAILTNQYIQRLASIRAIP-GPAIP 398
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 57/75 (76%), Gaps = 2/75 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A ++Q+ LLGE LYPL++ L A K+TGMLLE+D +E+LH+LESPE
Sbjct: 539 PLTA--SMLAAAPLKEQKQLLGERLYPLIQILHPALAGKITGMLLEIDNSELLHMLESPE 596
Query: 555 ALKAKVAEAMEVLRS 569
+L AKV EA+ VL++
Sbjct: 597 SLHAKVEEAVAVLQA 611
>gi|41152034|ref|NP_958453.1| polyadenylate-binding protein 4 [Danio rerio]
gi|31419252|gb|AAH53126.1| Poly(A) binding protein, cytoplasmic 4 (inducible form) [Danio
rerio]
Length = 637
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 220/385 (57%), Positives = 291/385 (75%), Gaps = 4/385 (1%)
Query: 21 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYAN 80
A+ + SLYVGDL ++T++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+
Sbjct: 3 AATAGSYPMASLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQ 62
Query: 81 PADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSS 140
PADA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+
Sbjct: 63 PADAERALDTMNFDVVKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSA 122
Query: 141 FGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERE 200
FGNILSCK+ D +G SKG+ FV FE +++A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 123 FGNILSCKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKERE 181
Query: 201 T-VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFEN 258
+ K K F NV++KN + D+ LK++F +YG S VM D GKS+ FGFV++E
Sbjct: 182 AEMGAKAKEFTNVYIKNFGDDMDDQRLKELFDKYGKTLSVKVMTDPTGKSRGFGFVSYEK 241
Query: 259 ADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKN 318
+DA KAVE +NG + + + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKN
Sbjct: 242 HEDANKAVEEMNGTELNGKTVFVGRAQKKMERQAELKRKFEQLKQERISRYQGVNLYIKN 301
Query: 319 LGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIV 378
L D+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++
Sbjct: 302 LDDTIDDEKLRKEFSPFGSITSAKVMLE-EGRSKGFGFVCFSSPEEATKAVTEMNGRIVG 360
Query: 379 SKPLYVAVAQRKEERRARLQAQFSQ 403
SKPLYVA+AQRKEER+A L Q+ Q
Sbjct: 361 SKPLYVALAQRKEERKAHLTNQYMQ 385
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 101/289 (34%), Positives = 171/289 (59%), Gaps = 16/289 (5%)
Query: 118 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAID 176
++++ +L I L++ FS G +LS ++ D + +S G+ +V F+ A+ A+D
Sbjct: 12 ASLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 71
Query: 177 KLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTIT 236
+N ++ K + + +R+ K+ NVF+KNLD+S ++ L F +G I
Sbjct: 72 TMNFDVVKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNIL 127
Query: 237 SAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKG 296
S V+ D +G SK + FV+FE D A +A+E +NG +DR+ +VG+ + + ERE E+
Sbjct: 128 SCKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAEMGA 186
Query: 297 QFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGF 356
+ ++ N+YIKN GD +DD++LKELF ++G S KVM DP+G S+G GF
Sbjct: 187 KAKEFT----------NVYIKNFGDDMDDQRLKELFDKYGKTLSVKVMTDPTGKSRGFGF 236
Query: 357 VAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
V++ E+A++A+ EMNG + K ++V AQ+K ER+A L+ +F Q++
Sbjct: 237 VSYEKHEDANKAVEEMNGTELNGKTVFVGRAQKKMERQAELKRKFEQLK 285
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 62/87 (71%), Gaps = 5/87 (5%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LES E
Sbjct: 543 PLTA--SMLAAAPPQEQKQMLGERLFPLIQAMHPSLAGKITGMLLEIDNSELLHMLESHE 600
Query: 555 ALKAKVAEAMEVLRSVAQQQANNPADQ 581
+L++KV EA+ VL++ QA A Q
Sbjct: 601 SLRSKVEEAVAVLQA---HQAKKDATQ 624
>gi|392595814|gb|EIW85137.1| polyadenylate binding protein [Coniophora puteana RWD-64-598 SS2]
Length = 683
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 206/383 (53%), Positives = 292/383 (76%), Gaps = 2/383 (0%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVG+LD VT++ ++++F+ +G V S+RVCRD TRRSLGY YVNY N AD RAL
Sbjct: 44 SASLYVGELDPTVTEAMIFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNTADGERAL 103
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LN++ + + RIM+S RDP++RK+G GNIFIKNLD+ ID+KALHDTF +FGN+LSCK
Sbjct: 104 EQLNYSLIKGRPCRIMWSQRDPALRKTGQGNIFIKNLDEQIDNKALHDTFVAFGNVLSCK 163
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKT 206
+ATD G+SKG+GFV +E E+A+ AI +NGML+NDK+V+VG + ++ER++ +K
Sbjct: 164 VATDEQGRSKGYGFVHYETAEAAETAIKAVNGMLLNDKKVYVGPHIPRKERQSKLDEMKA 223
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
+F N+++KNLD T E+ +++F YG++TSA+V D +G+SK FGFVN+E+ ++A AV
Sbjct: 224 QFTNLYIKNLDTEVTQEEFEELFNRYGSVTSAIVQVDDEGRSKGFGFVNYESHEEAQAAV 283
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
+ L+ ++ YV +AQKK+ERE+EL+ +EQA E + K+QG+NLY+KNL D +DD+
Sbjct: 284 DNLHDTDLKGKKLYVTRAQKKAEREEELRRSYEQAKMEKLSKYQGVNLYVKNLEDDVDDD 343
Query: 327 KLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 386
KL+ F FGTITSCKVM D G SKG GFV FS+P+EA++A+AEMN KMI SKPLYV++
Sbjct: 344 KLRAEFEPFGTITSCKVMSDEKGSSKGFGFVCFSSPDEATKAIAEMNNKMIGSKPLYVSL 403
Query: 387 AQRKEERRARLQAQFSQMRPVAM 409
AQR+E RR +L++Q +Q + M
Sbjct: 404 AQRREVRRQQLESQIAQRNQIRM 426
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 52/75 (69%)
Query: 500 STALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAK 559
+TALA P +Q+ +LGE +Y + + + A K+TGMLLEM+ E+LHLLE+P+A+ AK
Sbjct: 602 ATALAGLPPMEQKQMLGEVIYMNIVATQPELAGKITGMLLEMENPELLHLLETPDAMAAK 661
Query: 560 VAEAMEVLRSVAQQQ 574
V EA+ VL ++ +
Sbjct: 662 VNEALAVLHDFSKDE 676
>gi|126320658|ref|XP_001364500.1| PREDICTED: polyadenylate-binding protein 4-like [Monodelphis
domestica]
Length = 630
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 222/383 (57%), Positives = 290/383 (75%), Gaps = 4/383 (1%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
+ + + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ PA
Sbjct: 4 AASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPA 63
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
DA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+FG
Sbjct: 64 DAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET- 201
NILSCK+ D +G SKG+ FV FE +++A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 124 NILSCKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Query: 202 VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
+ K K F NV++KN + D LK++F +YG S VM D GKSK FGFV+FE +
Sbjct: 183 LGAKAKEFTNVYIKNFGDDMDDGRLKELFSKYGKTLSVKVMTDPSGKSKGFGFVSFEKHE 242
Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
DA KAVE +NGK + + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL
Sbjct: 243 DANKAVEEMNGKDINGKMVFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLD 302
Query: 321 DSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSK 380
D+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+P+EA++A+ EMNG+++ SK
Sbjct: 303 DTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPDEATKAVTEMNGRIVGSK 361
Query: 381 PLYVAVAQRKEERRARLQAQFSQ 403
PLYVA+AQRKEER+A L Q+ Q
Sbjct: 362 PLYVALAQRKEERKAHLTNQYMQ 384
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 464 PFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLV 523
P+ A P P P+ V P+TA + LA A P++Q+ +LGE L+PL+
Sbjct: 509 PYKYAANVRSPHPAIQPLQTPQPAVHVQGQEPLTA--SMLAAAPPQEQKQMLGERLFPLI 566
Query: 524 EQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRS 569
+ + + A K+TGMLLE+D +E+LH+LESPE+L++KV EA+ VL++
Sbjct: 567 QTMHNNLAGKITGMLLEIDNSELLHMLESPESLRSKVEEAVAVLQA 612
>gi|255718749|ref|XP_002555655.1| KLTH0G14344p [Lachancea thermotolerans]
gi|238937039|emb|CAR25218.1| KLTH0G14344p [Lachancea thermotolerans CBS 6340]
Length = 587
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 266/584 (45%), Positives = 364/584 (62%), Gaps = 31/584 (5%)
Query: 1 MAQIQVQHQAQMSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVR 60
+ Q+++Q + Q P + +S + + SLYVG+LD +VT++ LYDLFS +G V S+R
Sbjct: 12 LEQLKIQDEPQTE-PTSAESESSKVESSSASLYVGELDPSVTEALLYDLFSPIGSVSSIR 70
Query: 61 VCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNI 120
VCRD T+ SLGY YVN+ + A++ LN+TP+ + RIM+S RDPS+RK G+GN+
Sbjct: 71 VCRDAITKTSLGYAYVNFHDHNAGRTAIEKLNYTPIKGRPCRIMWSQRDPSLRKKGSGNV 130
Query: 121 FIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNG 180
FIKNL +ID+KALHDTFS FGNILSCKIATD +G+S+ FGFV FE +E+A+ AID +NG
Sbjct: 131 FIKNLHPAIDNKALHDTFSVFGNILSCKIATDETGKSRKFGFVHFEEEEAAKEAIDAING 190
Query: 181 MLINDKQVFVGHFLRKQERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSA 238
ML+N +V+V + K++R++ +K+ F NV+VKN+D TT E+ +K+F YG ITSA
Sbjct: 191 MLLNGLEVYVAPHVSKKDRQSKLDEVKSNFTNVYVKNIDSETTQEEFEKMFSNYGAITSA 250
Query: 239 VVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQF 298
V+ RD +GK + FGFVNFE+ + A KA E LN F ++ YVG+AQKK ER QELK Q+
Sbjct: 251 VLERDNEGKLRGFGFVNFEDHNAALKACEELNDTDFKGQKLYVGRAQKKYERLQELKKQY 310
Query: 299 EQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVA 358
E + E + K+QG+NL++KNL DS+DD+KL+E F+ FGTITS KVMRD +G SKG GFV
Sbjct: 311 ESSRMEKLAKYQGVNLFVKNLDDSVDDQKLEEEFAPFGTITSVKVMRDEAGNSKGFGFVC 370
Query: 359 FSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQF---SQMRPVAMGPSVPP 415
FSTPEEA++A+ E N +++ KPLYVA+AQRKE RR++L Q +QMR +
Sbjct: 371 FSTPEEATKAITEKNQQIVAGKPLYVAIAQRKEVRRSQLAQQIQARNQMRYQQATAAAAA 430
Query: 416 RMPMYPPGPSGLGQQFLYGQAPPAIIPPQMP-PRGHAYRYPLGRN-MQDFPFDMGAGSML 473
M P Q YG PP +P P P+ A + +N + F AG M
Sbjct: 431 AAGM----PGQFMQPMFYGVMPPRGVPFNGPNPQQMAAMNGIPKNGVPPQQFGRPAGPMY 486
Query: 474 PVPVDMGAG-IPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERD--A 530
VP G PR ++QR LGE LY V +D A
Sbjct: 487 GVPPQGPQGAFPRNGNQFFH----------------QKQRQALGEQLYKRVSAKTQDEEA 530
Query: 531 AAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQ 574
A K+TGM+L++ EV+ LLE+ E + EA S + Q
Sbjct: 531 AGKITGMILDLPPQEVVPLLENDELFEQHFKEAFAAYDSFKKDQ 574
>gi|410898224|ref|XP_003962598.1| PREDICTED: polyadenylate-binding protein 4-like [Takifugu rubripes]
Length = 653
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 222/384 (57%), Positives = 294/384 (76%), Gaps = 5/384 (1%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+GN + SLYVGDL ++T++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN++ P
Sbjct: 4 AAGN-YPMASLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFDVVKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G SKG+ FV FE +++A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 202 -VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ K K F NV++KN + DE LK++F +YG S VM D GKS+ FGFV++E
Sbjct: 182 ELGAKAKEFTNVYIKNFGDDMDDERLKELFDKYGKTLSVKVMMDPTGKSRGFGFVSYEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAVE +NG + + + +VG+AQKK+ER+ ELK +FE +E + ++QG+NLYIKNL
Sbjct: 242 EDANKAVEDMNGTELNGKTVFVGRAQKKNERQAELKRKFEMLKQERISRYQGVNLYIKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ S
Sbjct: 302 DDTIDDEKLRKEFSPFGSITSAKVMLE-EGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 380 KPLYVAVAQRKEERRARLQAQFSQ 403
KPLYVA+AQRKEER+A L Q+ Q
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQ 384
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 101/289 (34%), Positives = 169/289 (58%), Gaps = 16/289 (5%)
Query: 118 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAID 176
++++ +L I L++ FS G +LS ++ D + +S G+ +V F A+ A+D
Sbjct: 11 ASLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQPADAERALD 70
Query: 177 KLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTIT 236
+N ++ K + + +R+ K+ NVF+KNLD+S ++ L F +G I
Sbjct: 71 TMNFDVVKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNIL 126
Query: 237 SAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKG 296
S V+ D +G SK + FV+FE D A +A+E +NG +DR+ +VG+ + + ERE EL
Sbjct: 127 SCKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAELGA 185
Query: 297 QFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGF 356
+ ++ N+YIKN GD +DDE+LKELF ++G S KVM DP+G S+G GF
Sbjct: 186 KAKEFT----------NVYIKNFGDDMDDERLKELFDKYGKTLSVKVMMDPTGKSRGFGF 235
Query: 357 VAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
V++ E+A++A+ +MNG + K ++V AQ+K ER+A L+ +F ++
Sbjct: 236 VSYEKHEDANKAVEDMNGTELNGKTVFVGRAQKKNERQAELKRKFEMLK 284
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 63/89 (70%), Gaps = 5/89 (5%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+T + LA A P++Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+LES E
Sbjct: 558 PLTP--SMLAAAPPQEQKQMLGERLFPLIQAMHANLAGKITGMLLEIDNSELLHMLESHE 615
Query: 555 ALKAKVAEAMEVLRSVAQQQANNPADQLA 583
+L++KV EA+ VL++ QA A Q A
Sbjct: 616 SLRSKVEEAVAVLQA---HQAKKDATQKA 641
>gi|383417509|gb|AFH31968.1| polyadenylate-binding protein 1 [Macaca mulatta]
Length = 456
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 228/406 (56%), Positives = 295/406 (72%), Gaps = 7/406 (1%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
S + SLYVGDL +VT++ LY+ FS G +LS+RVCRD+ TRRSLGY YVN+ PA
Sbjct: 4 SAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPA 63
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
DA RALD +NF + K +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FG
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFG 123
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 202
NILSCK+ D +G SKG+GFV FE +E+A+ AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 124 NILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Query: 203 --AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
A +F NV++KN E DE LK +F G S VM D GKSK FGFV+FE +
Sbjct: 183 LGARAKEFTNVYIKNFGEDMDDERLKDLF---GPALSVKVMTDESGKSKGFGFVSFERHE 239
Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
DA KAV+ +NGK+ + ++ YVG+AQKK ER+ ELK +FEQ ++ + ++QG+NLY+KNL
Sbjct: 240 DAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLD 299
Query: 321 DSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSK 380
D IDDE+L++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +K
Sbjct: 300 DGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATK 358
Query: 381 PLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSG 426
PLYVA+AQRKEER+A L Q+ Q P P P PSG
Sbjct: 359 PLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSG 404
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 108/298 (36%), Positives = 171/298 (57%), Gaps = 19/298 (6%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFEN 167
+PS ++++ +L + L++ FS G ILS ++ D + +S G+ +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
A+ A+D +N +I K V + +R+ K+ N+F+KNLD+S ++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYD 117
Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
F +G I S V+ D +G SK +GFV+FE + A +A+E +NG +DR+ +VG+ + +
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
ERE EL + ++ N+YIKN G+ +DDE+LK+L FG S KVM D
Sbjct: 177 KEREAELGARAKEFT----------NVYIKNFGEDMDDERLKDL---FGPALSVKVMTDE 223
Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
SG SKG GFV+F E+A +A+ EMNGK + K +YV AQ+K ER+ L+ +F QM+
Sbjct: 224 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 281
>gi|326931817|ref|XP_003212020.1| PREDICTED: embryonic polyadenylate-binding protein-like [Meleagris
gallopavo]
Length = 633
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 226/431 (52%), Positives = 303/431 (70%), Gaps = 11/431 (2%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
ASG + SLYVGDL +VT++ LY+ FS G +LS+RVCRD+++RRSLGY Y+N+ P
Sbjct: 3 ASGPGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVASRRSLGYAYINFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + + +RIM+S RDP +RKSG GN+FIKNLD SID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFEVIKGRPVRIMWSQRDPGLRKSGVGNVFIKNLDDSIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G S+G GFV FE +E+A AI+ +NGML+ND++VFVGHF ++ERE
Sbjct: 123 GNILSCKVVCDENG-SRGHGFVHFETQEAATRAIETMNGMLLNDRKVFVGHFKSRKEREA 181
Query: 202 V--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
A +F NV++KN + D L++IF +G S VM D G+SK FGFVNFE
Sbjct: 182 EFGARAMEFTNVYIKNFGDDMDDNRLREIFSRFGKTLSVKVMMDNTGRSKGFGFVNFEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
++A KAV +NGK+ + R YVG+AQK+ ER+ ELK +FEQ +E V ++QG+NLY+KNL
Sbjct: 242 EEAQKAVADMNGKEINGRMVYVGRAQKRLERQSELKRKFEQMKQERVSRYQGVNLYVKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D IDDE+L++ FS +GTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +
Sbjct: 302 DDGIDDERLRKEFSPYGTITSAKVMTE-GGHSKGFGFVCFSSPEEATKAVTEMNGRIVST 360
Query: 380 KPLYVAVAQRKEERRARLQAQFSQ----MRPVA---MGPSVPPRMPMYPPGPSGLGQQFL 432
KPLYVA+AQRKEER+A L Q+ Q MR + +G PP PP P +
Sbjct: 361 KPLYVALAQRKEERKAILTNQYMQRLATMRALPGPFLGSFQPPPGYFLPPIPQPQPRAAF 420
Query: 433 YGQAPPAIIPP 443
Y +P + P
Sbjct: 421 YSPSPVVPVRP 431
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 69/106 (65%), Gaps = 10/106 (9%)
Query: 479 MGAGIPRRDASVGQPM-------PITALSTALANASPEQQRTLLGESLYPLVEQLERDAA 531
MG+ +P VG+P P+TA + LA A P++Q+ ++GE LYPL+ + A
Sbjct: 522 MGS-VPPGAQQVGEPAVHVQGQEPLTA--SMLAAAPPQEQKQMIGERLYPLIHAMHASLA 578
Query: 532 AKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANN 577
K+TGMLLE+D +E+L LLESPE+L +K+ EA+ VL++ +A++
Sbjct: 579 GKITGMLLEIDNSELLLLLESPESLHSKIEEAVAVLQAHQATEASH 624
>gi|47219550|emb|CAG09904.1| unnamed protein product [Tetraodon nigroviridis]
Length = 623
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 221/384 (57%), Positives = 293/384 (76%), Gaps = 5/384 (1%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+GN + SLYVGDL ++T++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN++ P
Sbjct: 4 AAGN-YPMASLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFDVVKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G SKG+ FV FE +++A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 202 -VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ K K F NV++KN + DE LK++F +YG S VM D GKS+ FGF+++E
Sbjct: 182 ELGAKAKEFTNVYIKNFGDDMNDERLKELFDKYGKTLSVKVMTDPTGKSRGFGFISYEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAVE +NG + + + +VG+AQKK ER+ ELK +FE +E + ++QG+NLYIKNL
Sbjct: 242 EDANKAVEDMNGTELNGKTVFVGRAQKKMERQAELKRKFEMLKQERISRYQGVNLYIKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ S
Sbjct: 302 DDTIDDEKLRKEFSPFGSITSAKVMLE-EGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 380 KPLYVAVAQRKEERRARLQAQFSQ 403
KPLYVA+AQRKEER+A L Q+ Q
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQ 384
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 169/289 (58%), Gaps = 16/289 (5%)
Query: 118 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAID 176
++++ +L I L++ FS G +LS ++ D + +S G+ +V F A+ A+D
Sbjct: 11 ASLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQPADAERALD 70
Query: 177 KLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTIT 236
+N ++ K + + +R+ K+ NVF+KNLD+S ++ L F +G I
Sbjct: 71 TMNFDVVKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNIL 126
Query: 237 SAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKG 296
S V+ D +G SK + FV+FE D A +A+E +NG +DR+ +VG+ + + ERE EL
Sbjct: 127 SCKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAELGA 185
Query: 297 QFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGF 356
+ ++ N+YIKN GD ++DE+LKELF ++G S KVM DP+G S+G GF
Sbjct: 186 KAKEFT----------NVYIKNFGDDMNDERLKELFDKYGKTLSVKVMTDPTGKSRGFGF 235
Query: 357 VAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
+++ E+A++A+ +MNG + K ++V AQ+K ER+A L+ +F ++
Sbjct: 236 ISYEKHEDANKAVEDMNGTELNGKTVFVGRAQKKMERQAELKRKFEMLK 284
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 65/90 (72%), Gaps = 3/90 (3%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+T + LA A P++Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+LES E
Sbjct: 532 PLT--PSMLAAAPPQEQKQMLGERLFPLIQAMHANLAGKITGMLLEIDNSELLHMLESHE 589
Query: 555 ALKAKVAEAMEVLRS-VAQQQANNPADQLA 583
+L++KV EA+ VL++ A++ A A LA
Sbjct: 590 SLRSKVEEAVAVLQAHQAKKDATQKAGNLA 619
>gi|281344898|gb|EFB20482.1| hypothetical protein PANDA_020836 [Ailuropoda melanoleuca]
Length = 674
Score = 453 bits (1166), Expect = e-124, Method: Compositional matrix adjust.
Identities = 234/438 (53%), Positives = 304/438 (69%), Gaps = 39/438 (8%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+ + + SLYVGDL +VT++ LY+ FS G VLS+ VCRD+ TRRSLGY YVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIWVCRDMITRRSLGYAYVNFQQP 62
Query: 82 AD-------------AARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKS 128
AD RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKS
Sbjct: 63 ADVMPTSTSSSPLTVTERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKS 122
Query: 129 IDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQV 188
ID+KAL+DTFS+FGNILSCK+ D +G SKG+ FV FE +E+A AI+K+NGML+ND++V
Sbjct: 123 IDNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKV 181
Query: 189 FVGHFLRKQERET-VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDG 246
FVG F ++ERE + K K F NV++KN E DE LK++F ++G S VMRD G
Sbjct: 182 FVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSG 241
Query: 247 KSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETV 306
KSK FGFV++E +DA KAVE +NGK+ + +VG+AQKK ER+ ELK +FEQ +E +
Sbjct: 242 KSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERI 301
Query: 307 DKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEAS 366
++QG+NLYIKNL D+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+PEEA+
Sbjct: 302 SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEAT 360
Query: 367 RALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQF----------------SQMRPVAMG 410
+A+ EMNG+++ SKPLYVA+AQRKEER+A L Q+ +Q +P A G
Sbjct: 361 KAVTEMNGRIVGSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGG 420
Query: 411 ---PSVPP---RMPMYPP 422
P+VP R P Y P
Sbjct: 421 YFVPAVPQAQGRPPYYTP 438
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 60/75 (80%), Gaps = 2/75 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A P++Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 583 PLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPE 640
Query: 555 ALKAKVAEAMEVLRS 569
+L++KV EA+ VL++
Sbjct: 641 SLRSKVDEAVAVLQA 655
>gi|242041385|ref|XP_002468087.1| hypothetical protein SORBIDRAFT_01g039310 [Sorghum bicolor]
gi|241921941|gb|EER95085.1| hypothetical protein SORBIDRAFT_01g039310 [Sorghum bicolor]
Length = 654
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 260/620 (41%), Positives = 365/620 (58%), Gaps = 74/620 (11%)
Query: 32 LYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVL 91
LYVGDL +V + L+D FS++G V SVRVCRD +T RSL YGYVNY + ADA ALD L
Sbjct: 44 LYVGDLHEDVAEEHLFDAFSKIGTVTSVRVCRDNATSRSLRYGYVNYFSRADAVMALDKL 103
Query: 92 NFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIAT 151
N + + +K IR+M+S+RDP R+SG GNIF+KNL+ S+D+ +L + FS FG++LSCK+A
Sbjct: 104 NHSLVLDKPIRVMWSNRDPDARRSGVGNIFVKNLNNSVDNASLQELFSKFGDVLSCKVAK 163
Query: 152 DGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNV 211
+ G S+G+GFVQF ++ESA AI LNG L ND+++ V F++K ER + KF N+
Sbjct: 164 NEDGTSRGYGFVQFASQESADEAIGNLNGSLFNDRKLHVATFIKKSER-SANNDDKFTNL 222
Query: 212 FVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNG 271
++K+LD+ T+E +K F ++G I S +MR DG S FGFV+F+N + A KA E ++G
Sbjct: 223 YMKHLDDDITEELVKLKFSQFGPIVSVKIMRRPDGSSLGFGFVSFQNPESAIKAQETMHG 282
Query: 272 KKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKEL 331
+ YV +AQKK ER+Q L+ E+ E + K N+YIKN+ D +DD+ L+
Sbjct: 283 MLLGSKALYVARAQKKEERKQYLQRLHEEKRNEIITKSNESNVYIKNIHDEVDDDALRAR 342
Query: 332 FSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKE 391
F+E+G ITS KVMRD GIS+G GFV +STPEEA + M G M KPLYVA+ QRKE
Sbjct: 343 FAEYGNITSAKVMRDDKGISRGFGFVCYSTPEEAKSVVNSMRGVMFFGKPLYVAIFQRKE 402
Query: 392 ERRARLQAQFSQM---------------------RPVAMGPSVPPRMPMYPPGPSGLGQQ 430
ERRA+LQ F+Q+ P A P PPR P P GL +
Sbjct: 403 ERRAKLQQHFAQLARMVGPTNSMIPTGYPQVYFAHPNAHIPQGPPRHGFVYP-PMGLSHE 461
Query: 431 F---LYGQAP--PAIIPPQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGA---- 481
+ ++ AP P I P MP YR GR MG G+M+P+P + A
Sbjct: 462 WRPNMFPSAPNLPQIHSPMMPNSPRHYRSNRGR--------MG-GNMMPLPHAVHAMNYV 512
Query: 482 ----------GIPRRD---------------ASVGQPMPITAL----STALANASPEQQR 512
+PR+ ++ Q P++ + S+ LA+A P +Q+
Sbjct: 513 THAQPTKEFMSMPRQRFNHSKYFSNDVMANGLAIHQSDPVSTMNDSFSSYLASAPPAEQK 572
Query: 513 TLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVA- 571
LLG LYPLVE+ + + A+K+TGMLLE+D +EV+ LL S E L KV E +++L++
Sbjct: 573 NLLGNRLYPLVERHQPELASKITGMLLELDNSEVVTLLCSSEMLSVKVDECVQLLQATKP 632
Query: 572 ---QQQANNPADQLASLSLN 588
+A +P + S S+N
Sbjct: 633 KTEDHEALHPGFMMESPSVN 652
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 102/186 (54%), Gaps = 17/186 (9%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
T+LY+ LD ++T+ + FSQ G ++SV++ R SLG+G+V++ NP A +A +
Sbjct: 220 TNLYMKHLDDDITEELVKLKFSQFGPIVSVKIMRR-PDGSSLGFGFVSFQNPESAIKAQE 278
Query: 90 VLNFTPLNNKSI----------------RIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKA 133
++ L +K++ R+ R+ I KS N++IKN+ +D A
Sbjct: 279 TMHGMLLGSKALYVARAQKKEERKQYLQRLHEEKRNEIITKSNESNVYIKNIHDEVDDDA 338
Query: 134 LHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHF 193
L F+ +GNI S K+ D G S+GFGFV + E A++ ++ + G++ K ++V F
Sbjct: 339 LRARFAEYGNITSAKVMRDDKGISRGFGFVCYSTPEEAKSVVNSMRGVMFFGKPLYVAIF 398
Query: 194 LRKQER 199
RK+ER
Sbjct: 399 QRKEER 404
>gi|363753804|ref|XP_003647118.1| hypothetical protein Ecym_5562 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890754|gb|AET40301.1| hypothetical protein Ecym_5562 [Eremothecium cymbalariae
DBVPG#7215]
Length = 580
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 257/589 (43%), Positives = 360/589 (61%), Gaps = 77/589 (13%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVG+LD +V+++ LYD+FS +G V S+RVCRD T SLGY YVN+ + +A++
Sbjct: 39 SLYVGELDPSVSEALLYDIFSPIGSVSSIRVCRDAITNTSLGYAYVNFHDHEAGRKAIEQ 98
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
LN+T + K RIM+S RDPS+RK G+GNI+IKNL +ID+K+LH+TFS+FGNILSCK+A
Sbjct: 99 LNYTLIKGKPCRIMWSQRDPSLRKKGSGNIYIKNLHPAIDNKSLHETFSTFGNILSCKVA 158
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTKF 208
TD +G S+GFGFV FEN+ A++AI+ +NGML+ND++V+V + K++R++ +K KF
Sbjct: 159 TDDNGVSRGFGFVHFENESDARDAIEAVNGMLMNDQEVYVAWHVSKKDRQSKLEEVKAKF 218
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
N++VKN+D T+ E+ +++F +YG ITSAV+ +D +GK + FGF+NFE+ AA+AV+
Sbjct: 219 TNIYVKNIDLETSQEEFEQLFSKYGKITSAVLEKDSEGKLRGFGFINFEDHSTAARAVDE 278
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
LN F + YVG+AQKK ER+QELK Q+E A E + K+QG+NL+IKNL DSIDDEKL
Sbjct: 279 LNESDFRGQTLYVGRAQKKHERQQELKKQYETARLEKLAKYQGVNLFIKNLDDSIDDEKL 338
Query: 329 KELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
K+ F+ FGTITS KVM+D +G S+G GFV FSTPEEA++A+ E N +++ KPLYVA+AQ
Sbjct: 339 KDEFAPFGTITSVKVMKDEAGSSRGFGFVCFSTPEEATKAITEKNQQLVAGKPLYVAIAQ 398
Query: 389 RKEERRARLQAQF---SQMR----------------------PVAMGPSVPPRMPMYPPG 423
RKE RR +L Q +QMR P+ G +PPR+P P
Sbjct: 399 RKEVRRNQLAQQIQARNQMRFQHANAAAAAAVAGLPGQFIPPPMYYG-GIPPRVPFQGPN 457
Query: 424 PSGLGQQFLYGQAPPAIIPPQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGI 483
P + G IPPQ GR P P+ G G
Sbjct: 458 PQ------MTGMPKNGAIPPQQ----------FGR---------------PGPMYGGFGP 486
Query: 484 PRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLV--EQLERDAAAKVTGMLLEM 541
+ GQ A LGE LY V + + +AA K+TGM+L++
Sbjct: 487 QGQFPRNGQQQQFYQQKQRQA----------LGEQLYQKVFAKTQDEEAAGKITGMILDL 536
Query: 542 DQTEVLHLLESPEALKAKVAEAMEVLRSV-AQQQANNPADQLASLSLNE 589
+V+ LLE+ + L+ EA + A Q+A Q+AS+ E
Sbjct: 537 PPQQVIQLLENDDLLEQHFQEAHAAYKKFKADQEA-----QVASVESQE 580
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 98/186 (52%), Gaps = 17/186 (9%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
T++YV ++D + + LFS+ G++ S + +D S + G+G++N+ + + AARA+D
Sbjct: 219 TNIYVKNIDLETSQEEFEQLFSKYGKITSAVLEKD-SEGKLRGFGFINFEDHSTAARAVD 277
Query: 90 VLNFTPLNNKSI---RIMYSH-------------RDPSIRKSGTGNIFIKNLDKSIDHKA 133
LN + +++ R H R + K N+FIKNLD SID +
Sbjct: 278 ELNESDFRGQTLYVGRAQKKHERQQELKKQYETARLEKLAKYQGVNLFIKNLDDSIDDEK 337
Query: 134 LHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHF 193
L D F+ FG I S K+ D +G S+GFGFV F E A AI + N L+ K ++V
Sbjct: 338 LKDEFAPFGTITSVKVMKDEAGSSRGFGFVCFSTPEEATKAITEKNQQLVAGKPLYVAIA 397
Query: 194 LRKQER 199
RK+ R
Sbjct: 398 QRKEVR 403
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 311 GLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP-SGISKGSGFVAFSTPEEASRAL 369
G +LY+ L S+ + L ++FS G+++S +V RD + S G +V F E +A+
Sbjct: 37 GASLYVGELDPSVSEALLYDIFSPIGSVSSIRVCRDAITNTSLGYAYVNFHDHEAGRKAI 96
Query: 370 AEMNGKMIVSKPLYVAVAQRKEERRAR 396
++N +I KP + +QR R +
Sbjct: 97 EQLNYTLIKGKPCRIMWSQRDPSLRKK 123
>gi|50547639|ref|XP_501289.1| YALI0C00539p [Yarrowia lipolytica]
gi|74689742|sp|Q6CDH3.1|PABP_YARLI RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|49647156|emb|CAG81584.1| YALI0C00539p [Yarrowia lipolytica CLIB122]
Length = 629
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 260/589 (44%), Positives = 365/589 (61%), Gaps = 54/589 (9%)
Query: 21 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYAN 80
G+ +Q SLYVG+LD +VT++ L+++F+ +G V SVRVCRD TRRSLGY YVN+ N
Sbjct: 37 GSKEDQGDNASLYVGELDPSVTEAMLFEIFNPIGPVTSVRVCRDAITRRSLGYAYVNFHN 96
Query: 81 PADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSS 140
AD RAL+ LN++P+ + RIM+S RDP++RK+G GNI+IKNLD +ID+KALHDTFS+
Sbjct: 97 QADGIRALEELNYSPIKERPCRIMWSQRDPALRKTGAGNIYIKNLDPAIDNKALHDTFSA 156
Query: 141 FGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER- 199
FG ILSCKIATD G S+GFGFV +E+ ESA++AI +NGML+NDK+VFVG + K +R
Sbjct: 157 FGQILSCKIATDEFGNSRGFGFVHYESAESAESAIQHVNGMLLNDKKVFVGPHVPKSDRM 216
Query: 200 -ETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFEN 258
K F NVF+KNL T+ + +++ ++G +S + + +GK FGFV+++
Sbjct: 217 QSFEEQKNSFTNVFIKNLGTEITEAEFEELVNKFGETSSVHLSTNDEGKPTGFGFVDYKE 276
Query: 259 ADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKN 318
D A KA++ L+ +F + + G+A+KK ER EL+ Q+E + E ++K+QG+NLYIKN
Sbjct: 277 HDVAVKAIDGLSETEFKGNKLFAGRAKKKYERADELRKQYEASRLEKLNKYQGVNLYIKN 336
Query: 319 LGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIV 378
L D+IDD+KL+ F+ GTITS KVM D +G SKG GFV +S+PEEA++A+ EMN +++
Sbjct: 337 LDDTIDDDKLRAEFAPHGTITSAKVMVDEAGKSKGFGFVCYSSPEEATKAVTEMNHRLVA 396
Query: 379 SKPLYVAVAQRKEERRARLQAQF---SQMR-----------------PVAMGPSVPPRMP 418
KPLYV +AQRK+ RR++LQ Q +QMR P P P M
Sbjct: 397 GKPLYVVLAQRKDVRRSQLQQQIQAKNQMRLQQQAAAGGLPGQYMGNPGVFYPGQPGFM- 455
Query: 419 MYPPGPSGL--GQQFLYGQAPPAIIPPQMPPRGHAYRYPLGRNMQDFP---FDMGA---- 469
PPG G+ G PP Q PPRG P G NM P + G
Sbjct: 456 --PPGRGGMPFGANPQMMMRPPMPPQNQFPPRG----VPGGPNMYGAPPQGYQQGGFPPQ 509
Query: 470 GSML---------PVPVDMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLY 520
G M P P G PRR G+ ++S AL NA EQ + L+GE+LY
Sbjct: 510 GPMRGGQPPRSGQPGPQGQFRGAPRRKD--GESRVADSISNALENAPEEQHKQLVGEALY 567
Query: 521 PLV---EQLERDA--AAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAM 564
P V + ++ +A A K+TGMLLEM E+L +++ E L+A++ +A+
Sbjct: 568 PKVLAEKAIDGNAEFAGKITGMLLEMPIKEILEVIDDEEGLQAQINDAI 616
Score = 46.2 bits (108), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 52/103 (50%), Gaps = 3/103 (2%)
Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
+E E + + E+ KE D+ +LY+ L S+ + L E+F+ G +TS +V RD
Sbjct: 24 AEGEAKTESSEEKGSKE--DQGDNASLYVGELDPSVTEAMLFEIFNPIGPVTSVRVCRDA 81
Query: 348 -SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQR 389
+ S G +V F + RAL E+N I +P + +QR
Sbjct: 82 ITRRSLGYAYVNFHNQADGIRALEELNYSPIKERPCRIMWSQR 124
>gi|294659673|ref|XP_002770625.1| DEHA2G12474p [Debaryomyces hansenii CBS767]
gi|218511736|sp|Q6BI95.2|PABP_DEBHA RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|199434145|emb|CAR65959.1| DEHA2G12474p [Debaryomyces hansenii CBS767]
Length = 627
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 258/580 (44%), Positives = 368/580 (63%), Gaps = 31/580 (5%)
Query: 13 SGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLG 72
SG AA ++ + SLYVG+L+ +V ++ L+++FS +GQV S+RVCRD T++SLG
Sbjct: 34 SGETEEAADSAQVSDTSASLYVGELNPSVNEALLFEIFSPIGQVASIRVCRDAVTKKSLG 93
Query: 73 YGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHK 132
Y YVN+ D +A++ LN++ + + RIM+S RDPS+R++G GNIFIKNL +ID+K
Sbjct: 94 YAYVNFHKFEDGEKAIEDLNYSLIEGRPCRIMWSQRDPSLRRNGDGNIFIKNLHPAIDNK 153
Query: 133 ALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGH 192
ALHDTF++FG ILSCK+ATD G SK FGFV +E E+A+ AI+ +NGML+ND++V+VG
Sbjct: 154 ALHDTFTAFGKILSCKVATDDMGISKCFGFVHYETAEAAEAAIENVNGMLLNDREVYVGK 213
Query: 193 FLRKQERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKC 250
+ K++RE+ +K F NV+ KN+D ++E+ KK+F YG ITS + +D +GKSK
Sbjct: 214 HISKKDRESKFEEMKANFTNVYAKNIDLDFSEEEFKKLFEAYGKITSIYLEKDHEGKSKG 273
Query: 251 FGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQ 310
FGFVNFEN + A KAV+ LN K+ + ++ YVG+AQKK ER +ELK Q+E E + K+Q
Sbjct: 274 FGFVNFENHESAVKAVDELNDKEINGQKIYVGRAQKKRERLEELKKQYENTRLEKLSKYQ 333
Query: 311 GLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALA 370
G+NL+IKNL D+ID EKL+E F FG+ITS +VM D +G SKG GFV FS+PEEA++A+
Sbjct: 334 GVNLFIKNLDDTIDSEKLEEEFKPFGSITSARVMVDETGKSKGFGFVCFSSPEEATKAIT 393
Query: 371 EMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAM----------GPSVPPRMPMY 420
EMN +MI KPLYVA+AQRK+ RR++L+ Q + M G +PP
Sbjct: 394 EMNQRMIYGKPLYVALAQRKDVRRSQLEQQIQARNQMRMQNAAATGGIPGQFIPPMFYGQ 453
Query: 421 PPG---PSGLGQQFLYGQAPPAIIPP-QMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVP 476
PG P+G G G P ++P Q+PP + P G N Q P G +
Sbjct: 454 QPGFFPPNGRGNGPFPGPNPQMMMPRGQIPPPQGQWPRP-GPNGQPVPV-YGMPPVYGGD 511
Query: 477 VDMGAG--------IPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLV----E 524
+ GA P R+ + + L+ +ANA +QQ+ +LGE LYP + +
Sbjct: 512 FNNGANGGRQQRGYYPNRNQNQ-KGRQQKDLAAIIANAPADQQKRILGEELYPKIVSTGK 570
Query: 525 QLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAM 564
E +AA K+TGM+L++D E+L LLE E +A+
Sbjct: 571 AQEPEAAGKITGMMLDLDNEEILALLEDDELFNTHFEDAL 610
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
Query: 289 EREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP- 347
E EQ G+ E+A +LY+ L S+++ L E+FS G + S +V RD
Sbjct: 28 ETEQTASGETEEAADSAQVSDTSASLYVGELNPSVNEALLFEIFSPIGQVASIRVCRDAV 87
Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQR 389
+ S G +V F E+ +A+ ++N +I +P + +QR
Sbjct: 88 TKKSLGYAYVNFHKFEDGEKAIEDLNYSLIEGRPCRIMWSQR 129
>gi|170044609|ref|XP_001849934.1| polyadenylate-binding protein 1 [Culex quinquefasciatus]
gi|167867688|gb|EDS31071.1| polyadenylate-binding protein 1 [Culex quinquefasciatus]
Length = 628
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 235/421 (55%), Positives = 305/421 (72%), Gaps = 23/421 (5%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL ++T++ L++ FS G VLS+RVCRD+ TRRSLGY YVN+ PADA RALD
Sbjct: 3 SLYVGDLHADITEAMLFEKFSSAGPVLSIRVCRDVVTRRSLGYAYVNFQQPADAERALDT 62
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF + + IRIM+S RDPS+RKSG GN+FIKNLDK+ID+KA++DTFS+FGNILSCK+A
Sbjct: 63 MNFDLIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVA 122
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET-VAIKTK-F 208
D G SKG+GFV FE +ESA +I+K+NGML+N K+VFVG F+ ++ERE + K K F
Sbjct: 123 QDEKGNSKGYGFVHFETEESANTSIEKVNGMLLNAKKVFVGRFIPRKEREKELGEKAKLF 182
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NV+VKN + TDE LK++F +YGTITS VM + KS+ FGFV FEN + A AV+
Sbjct: 183 TNVYVKNFGDELTDESLKEMFEKYGTITSHRVMIK-ENKSRGFGFVAFENPESAEVAVQE 241
Query: 269 LNGKKF-DDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEK 327
LNGK+ D + YVG+AQKK+ER+ ELK +FEQ E + ++QG+NLY+KNL DSIDDE+
Sbjct: 242 LNGKELGDGKVLYVGRAQKKNERQMELKRRFEQLKMERLTRYQGVNLYVKNLDDSIDDER 301
Query: 328 LKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 387
L++ FS FGTITS KVM + G SKG GFV FS EEA++A+ EMNG+++ SKPLYVA+A
Sbjct: 302 LRKEFSPFGTITSAKVMLE-EGRSKGFGFVCFSAAEEATKAVTEMNGRIVGSKPLYVALA 360
Query: 388 QRKEERRARLQAQFSQ----MRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPP 443
QRKE+R+A L +Q+ Q MR MG ++ PG +G G P I P
Sbjct: 361 QRKEDRKAHLASQYMQRMANMRMQHMG-------QIFQPGGNG-------GYYVPTIPQP 406
Query: 444 Q 444
Q
Sbjct: 407 Q 407
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 98/193 (50%), Gaps = 26/193 (13%)
Query: 28 LTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARA 87
L T++YV + +TD L ++F + G + S RV + +S G+G+V + NP A A
Sbjct: 181 LFTNVYVKNFGDELTDESLKEMFEKYGTITSHRVM--IKENKSRGFGFVAFENPESAEVA 238
Query: 88 LDVLNFTPLNNKSIRIMYSHR--------------------DPSIRKSGTGNIFIKNLDK 127
+ LN L + +++Y R + R G N+++KNLD
Sbjct: 239 VQELNGKELGDG--KVLYVGRAQKKNERQMELKRRFEQLKMERLTRYQGV-NLYVKNLDD 295
Query: 128 SIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQ 187
SID + L FS FG I S K+ + G+SKGFGFV F E A A+ ++NG ++ K
Sbjct: 296 SIDDERLRKEFSPFGTITSAKVMLE-EGRSKGFGFVCFSAAEEATKAVTEMNGRIVGSKP 354
Query: 188 VFVGHFLRKQERE 200
++V RK++R+
Sbjct: 355 LYVALAQRKEDRK 367
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 77/139 (55%), Gaps = 13/139 (9%)
Query: 441 IPPQMPP-RGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITAL 499
+ PQM + A Y +NM++ P A PV ++ V P+TA
Sbjct: 501 VAPQMAANQARAANYKYTQNMRNPPAQPVAIPTQPVA--------QQAVHVKGQEPLTA- 551
Query: 500 STALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAK 559
T LA A P +Q+ +LGE L+PL+E + A K+TGMLLE+D +E++H+LE E+LKAK
Sbjct: 552 -TMLAAAQPAEQKQMLGERLFPLIEPMYPSIAGKITGMLLEIDNSELVHMLEHSESLKAK 610
Query: 560 VAEAMEVLRSVAQQQANNP 578
V EA+ VL A QQ P
Sbjct: 611 VDEAVAVLH--AHQQKTQP 627
>gi|357120111|ref|XP_003561773.1| PREDICTED: polyadenylate-binding protein-like [Brachypodium
distachyon]
Length = 714
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 259/610 (42%), Positives = 359/610 (58%), Gaps = 56/610 (9%)
Query: 24 GNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPAD 83
G +LYVGDL + + L+D FS+VG V SVRVCRD +T SL YGYVNY + AD
Sbjct: 96 GTNATVPALYVGDLHEDAQEEHLFDAFSKVGAVTSVRVCRDTATSSSLRYGYVNYFSQAD 155
Query: 84 AARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGN 143
A AL+ +N + + +K IR+M+S+RDP R+SG GN+F+KNL+ ID+ L + FS FG+
Sbjct: 156 AMTALEKMNHSLILDKPIRVMWSNRDPDARRSGVGNVFVKNLNDHIDNVILQELFSKFGD 215
Query: 144 ILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVA 203
ILSCK+A + G S+G+GFVQF +ESA AI+ LN +Q+ V HF++K ER +
Sbjct: 216 ILSCKVARNDDGTSRGYGFVQFAAQESADIAIENLNNSHFEGRQLHVAHFIKKSER-SAN 274
Query: 204 IKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAA 263
K+ N+++KNLD+ T+E +K F ++G + S +M+ DG SK FGFV+F++ D A
Sbjct: 275 NDDKYTNLYMKNLDDDMTEELIKLKFSQFGPLISVKIMKRDDGTSKGFGFVSFKSPDSAK 334
Query: 264 KAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSI 323
KA EA+NG + YV +AQKK+ER+Q L+ E+ E + K G N+YIKN+ D +
Sbjct: 335 KAKEAMNGIPLGSKSLYVARAQKKAERKQYLQLLHEEKRNEILTKSNGSNVYIKNISDRV 394
Query: 324 DDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLY 383
DDE L+E F EFG ITS K+MRD GISKG GFV ++TP+EA A++ M G M KPLY
Sbjct: 395 DDETLRERFDEFGNITSVKIMRDDKGISKGFGFVCYNTPDEAKCAVSSMRGVMFYDKPLY 454
Query: 384 VAVAQRKEERRARLQAQFSQMRPV--AMGPSVPPRMP---------MYPPGPS------- 425
VA+AQRKE+R+ARL+ +F+++ + A P +P P +P GPS
Sbjct: 455 VAIAQRKEDRKARLEQRFAELATMVGAASPVIPTGYPHVYFAHPSTHFPQGPSRQGFMYP 514
Query: 426 --GLGQQFLYGQAPPA-----IIPPQMPPRGHAYRYPLGR---NMQDFPFDMGA------ 469
GLGQ++ P I P MP YR GR NM FP +
Sbjct: 515 PMGLGQEWRQNVFPSPHNIQQIHAPLMPNTPRQYRNNRGRMTGNMMTFPHTVNYVSHAQT 574
Query: 470 ------------GSMLPVPVDM---GAGIPRRDASVGQPMPITALSTALANASPEQQRTL 514
G +P D+ G I D P T+L LA A P+QQR +
Sbjct: 575 AKDFMSMSRQQFGHAKYIPADVMTSGLAIHHSDPVSSVNDPFTSL---LAAAPPDQQRNM 631
Query: 515 LGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQ 574
LG LYPLVE+ + A+K+TGMLL++D ++V+ L+ SP+ L AK+ E ++L+ QQ
Sbjct: 632 LGNRLYPLVERYHPELASKITGMLLDLDSSDVVLLICSPDMLSAKINECAQLLQ--GQQA 689
Query: 575 A-NNPADQLA 583
A P DQ A
Sbjct: 690 AKTKPEDQEA 699
>gi|225441084|ref|XP_002264613.1| PREDICTED: probable polyadenylate-binding protein At2g36660 [Vitis
vinifera]
gi|297740018|emb|CBI30200.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 275/600 (45%), Positives = 369/600 (61%), Gaps = 64/600 (10%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL ++TD L+D FS+ + SVR+CRD S+ RSL YGYVN+ +P DA+ A++
Sbjct: 13 SLYVGDLHPDITDGLLFDAFSEFKSLASVRICRDSSSGRSLCYGYVNFISPQDASHAIEA 72
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
N T L+ K IR+M+SHRDP R+SG GN+F+KNL SID+ L F FGNILSCK+
Sbjct: 73 KNHTMLHGKVIRVMWSHRDPDARRSGIGNVFVKNLSDSIDNVRLQAMFQKFGNILSCKVV 132
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNN 210
G+SKG+GFVQFE++E A AI+KLNG +I+ KQ++ G F+RK +R K+ N
Sbjct: 133 VTEDGKSKGYGFVQFESEEYANAAIEKLNGFIIDGKQIYAGKFVRKTDRVLPNPDAKYTN 192
Query: 211 VFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALN 270
+++KNLD T+E L++ F E+G I S V+ +D +G S+ FGFVNFE+ +DA +A+EALN
Sbjct: 193 LYIKNLDPDVTEEALREKFFEFGKIASLVISKDENGMSRGFGFVNFESPEDAKRALEALN 252
Query: 271 GKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKE 330
G + + YV +AQKK+EREQ L+ QFE+ E + K++G N+Y+KN+ D+++D+ L+E
Sbjct: 253 GLQLGSKVLYVARAQKKAEREQLLRRQFEEKRNEQILKYRGSNVYVKNIDDNVNDDDLRE 312
Query: 331 LFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRK 390
FS G ITS K+MRD GISKG GFV FSTP+EAS+A+ +G M KPLYVA+AQRK
Sbjct: 313 HFSVCGKITSAKLMRDQKGISKGFGFVCFSTPDEASKAVNTFHGYMFHRKPLYVAIAQRK 372
Query: 391 EERRARLQAQFSQMRPVAMGPSVPPRMPMYPP----GPSGL---GQQFLY-------GQA 436
E+R+A+LQ ++Q GPS P YPP P G+ Q +Y G
Sbjct: 373 EDRQAQLQLHYAQRMAGLAGPSTPVIPGGYPPLYYTAPPGVIPPRQGLMYQPLGLRTGWR 432
Query: 437 PPAIIPPQMP-------------PRGHAYRYPLGRNMQDFPFDMG--------------- 468
+IPP P PR H R GR P G
Sbjct: 433 ANNLIPPTRPAFQPSSIPLMPNTPRQH--RQNRGRTNGHIPQGGGHSTAFMPHLQQPTQP 490
Query: 469 ------------AGSMLPVP------VDMGAGIPRRDA-SVGQ-PMPITALSTALANASP 508
AG VP + G+GIP + SVG LS+ LA ASP
Sbjct: 491 VISPKDSINQQRAGQAKYVPNGRSYEMSKGSGIPSAASNSVGTGSQGSEMLSSMLAAASP 550
Query: 509 EQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLR 568
EQQ+ +LGE LYPLV++ + D AAK+TGMLLEMD +E+L LLESPE+L AKV EA++VL+
Sbjct: 551 EQQKQILGEHLYPLVQKQKPDLAAKITGMLLEMDNSELLLLLESPESLAAKVEEAVQVLK 610
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 101/187 (54%), Gaps = 17/187 (9%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
T+LY+ +LD +VT+ L + F + G++ S+ + +D S G+G+VN+ +P DA RAL+
Sbjct: 191 TNLYIKNLDPDVTEEALREKFFEFGKIASLVISKD-ENGMSRGFGFVNFESPEDAKRALE 249
Query: 90 VLNFTPLNNKSIRIMYSH----------------RDPSIRKSGTGNIFIKNLDKSIDHKA 133
LN L +K + + + R+ I K N+++KN+D +++
Sbjct: 250 ALNGLQLGSKVLYVARAQKKAEREQLLRRQFEEKRNEQILKYRGSNVYVKNIDDNVNDDD 309
Query: 134 LHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHF 193
L + FS G I S K+ D G SKGFGFV F + A A++ +G + + K ++V
Sbjct: 310 LREHFSVCGKITSAKLMRDQKGISKGFGFVCFSTPDEASKAVNTFHGYMFHRKPLYVAIA 369
Query: 194 LRKQERE 200
RK++R+
Sbjct: 370 QRKEDRQ 376
>gi|392346932|ref|XP_230831.6| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Rattus
norvegicus]
Length = 609
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 265/600 (44%), Positives = 371/600 (61%), Gaps = 73/600 (12%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
+SLYVGDL +VT++ LY++FS +G +LS+RVCRD++TRRSLGY Y+N+ PADA RALD
Sbjct: 11 SSLYVGDLHPDVTEAMLYEMFSPIGTILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 90 VLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKI 149
+NF + + IRIM+SHRDP +R+SG GNIFIKNL+ SID+KAL+DTFS+FG+ILS K+
Sbjct: 71 TMNFEMIKGQPIRIMWSHRDPGLRRSGMGNIFIKNLENSIDNKALYDTFSTFGSILSSKV 130
Query: 150 ATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTK 207
+ G S+GFGFV FE E+AQ AI+ +NGML+ND++VFVGHF +Q+RE A
Sbjct: 131 VYNEHG-SRGFGFVHFETHEAAQKAINTMNGMLLNDRKVFVGHFKSRQKREAELGARALG 189
Query: 208 FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVE 267
F N++VKNL ++ L+ +F ++G S VMRD +G+S+ FGF+NFE ++A KAV+
Sbjct: 190 FTNIYVKNLRVDMDEQGLQDLFSQFGKTQSVKVMRDSNGQSRGFGFINFEKHEEAQKAVD 249
Query: 268 ALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEK 327
+NGK+ + YVG+AQK++ER+ ELK +FEQ +E +++QG+NLY+KNL DSI+D++
Sbjct: 250 HMNGKEVSGQLLYVGRAQKRAERQNELKRRFEQMKQERQNRYQGVNLYVKNLDDSINDDR 309
Query: 328 LKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 387
LKE+FS +G ITS KVM + S SKG GFV FS+PEEA++A+ EMNG+++ +KPLYVA+A
Sbjct: 310 LKEVFSTYGVITSAKVMTESSH-SKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALA 368
Query: 388 QRKEERRARLQAQF----------------SQMRP--------------VAMGPSVP-PR 416
QRKEER+A L Q+ S + P ++ P P PR
Sbjct: 369 QRKEERKAILTNQYRRRLSRSVLSSFQQPTSYLLPAVHQSTTQTMYYSSASIAPMQPDPR 428
Query: 417 MPMYPPGPSGLGQQFLYGQAPPA---IIPPQMPPRGHAYRYPLGRNMQDFPFDM------ 467
P GPS PPA + P P + + P
Sbjct: 429 WTAQPHGPSST--------CPPAASVVQPLSTAPHPCIHLSSASQASSQVPHTQRVVNIG 480
Query: 468 -------GAGSMLP----------VPVDMGAGIPRRDASVGQPMPITALSTALANASP-E 509
G GS +P V G+ V P+T ++ +A+P
Sbjct: 481 TQTTGPGGEGSCIPGQPLLAHRGSSAVHSAHGVQESTVYVPGHQPLT---VSMLDAAPLH 537
Query: 510 QQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRS 569
+Q+ ++GE LY L+ K+TGMLLEMD E+L LLESPE+L AK+ EA+ VL++
Sbjct: 538 EQKQMIGERLYSLIHDACAPLTGKITGMLLEMDNLELLLLLESPESLHAKIEEAVAVLKA 597
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 59/105 (56%), Gaps = 3/105 (2%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
N++ +LYV +LD ++ D +L ++FS G + S +V + S S G+G+V +++P +A
Sbjct: 289 NRYQGVNLYVKNLDDSINDDRLKEVFSTYGVITSAKVMTESS--HSKGFGFVCFSSPEEA 346
Query: 85 ARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSI 129
+A+ +N + K + + + R RK+ N + + L +S+
Sbjct: 347 TKAVTEMNGRIVGTKPLYVALAQRKEE-RKAILTNQYRRRLSRSV 390
>gi|45201218|ref|NP_986788.1| AGR122Cp [Ashbya gossypii ATCC 10895]
gi|74691820|sp|Q74ZS6.1|PABP_ASHGO RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|44986072|gb|AAS54612.1| AGR122Cp [Ashbya gossypii ATCC 10895]
gi|374110037|gb|AEY98942.1| FAGR122Cp [Ashbya gossypii FDAG1]
Length = 585
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 254/549 (46%), Positives = 356/549 (64%), Gaps = 45/549 (8%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVG+L+ V+++ LYD+FS +G V S+RVCRD T SLGY YVN+ + +A++
Sbjct: 39 SLYVGELEPTVSEALLYDIFSPIGSVSSIRVCRDAITNTSLGYAYVNFHDHEAGPKAIEQ 98
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
LN+T + K RIM+S RDPS+RK G+GNI+IKNL +ID+K+LH+TFS+FGNILSCK+A
Sbjct: 99 LNYTLIKGKPCRIMWSQRDPSLRKKGSGNIYIKNLHPAIDNKSLHETFSTFGNILSCKVA 158
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTKF 208
TD +G S+GFGFV FEN+ A++AI+ ++GML+ND++V+V + K++R++ +K KF
Sbjct: 159 TDENGVSRGFGFVHFENESDARDAIEAVDGMLMNDQEVYVALHVSKKDRQSKLEEVKAKF 218
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NV+VKN+D+ T+ E+ +++FG+YG ITSAV+ +D +GK + FGFVNFE+ AAKAV+
Sbjct: 219 TNVYVKNIDQETSQEEFEELFGKYGKITSAVLEKDSEGKLRGFGFVNFEDHAAAAKAVDE 278
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
LN +F ++ YVG+AQKK ER QELK Q+E A E + K+QG+NL++KNL DSIDDEKL
Sbjct: 279 LNELEFKGQKLYVGRAQKKYERLQELKKQYEAARLEKLAKYQGVNLFVKNLDDSIDDEKL 338
Query: 329 KELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
KE F+ FGTITS KVMRD +G S+G GFV FSTPEEA++A+ E N +++ KPLYVA+AQ
Sbjct: 339 KEEFAPFGTITSAKVMRDETGNSRGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQ 398
Query: 389 RKEERRARLQAQF---SQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPPQM 445
RKE RR +L Q +QMR +GL QF+ PP + +
Sbjct: 399 RKEVRRNQLAQQIQARNQMR-------FQHANAAAAAAVAGLPGQFM----PPPMYYGGI 447
Query: 446 PPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITA------- 498
PPR PF M +P + GA P++ G+P P+
Sbjct: 448 PPR--------------VPFQGPNPQMAGMPKN-GAMPPQQ---FGRPGPMYGGFAPQGQ 489
Query: 499 --LSTALANASPEQQRTLLGESLYPLVEQLERD--AAAKVTGMLLEMDQTEVLHLLESPE 554
+ ++QR LGE LY V +D AA K+TGM+L++ +V+ LLE+ E
Sbjct: 490 FPRNGQQQQFYQQKQRQALGEQLYQKVFAKTQDDEAAGKITGMILDLPPQQVIQLLENDE 549
Query: 555 ALKAKVAEA 563
L+ EA
Sbjct: 550 LLEQHFQEA 558
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 96/186 (51%), Gaps = 17/186 (9%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
T++YV ++D + + +LF + G++ S + +D S + G+G+VN+ + A AA+A+D
Sbjct: 219 TNVYVKNIDQETSQEEFEELFGKYGKITSAVLEKD-SEGKLRGFGFVNFEDHAAAAKAVD 277
Query: 90 VLNFTPLNNKSIRIMYSH----------------RDPSIRKSGTGNIFIKNLDKSIDHKA 133
LN + + + + R + K N+F+KNLD SID +
Sbjct: 278 ELNELEFKGQKLYVGRAQKKYERLQELKKQYEAARLEKLAKYQGVNLFVKNLDDSIDDEK 337
Query: 134 LHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHF 193
L + F+ FG I S K+ D +G S+GFGFV F E A AI + N ++ K ++V
Sbjct: 338 LKEEFAPFGTITSAKVMRDETGNSRGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIA 397
Query: 194 LRKQER 199
RK+ R
Sbjct: 398 QRKEVR 403
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 311 GLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP-SGISKGSGFVAFSTPEEASRAL 369
G +LY+ L ++ + L ++FS G+++S +V RD + S G +V F E +A+
Sbjct: 37 GASLYVGELEPTVSEALLYDIFSPIGSVSSIRVCRDAITNTSLGYAYVNFHDHEAGPKAI 96
Query: 370 AEMNGKMIVSKPLYVAVAQRKEERRAR 396
++N +I KP + +QR R +
Sbjct: 97 EQLNYTLIKGKPCRIMWSQRDPSLRKK 123
>gi|254578926|ref|XP_002495449.1| ZYRO0B11660p [Zygosaccharomyces rouxii]
gi|238938339|emb|CAR26516.1| ZYRO0B11660p [Zygosaccharomyces rouxii]
Length = 587
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 259/604 (42%), Positives = 362/604 (59%), Gaps = 66/604 (10%)
Query: 1 MAQIQVQHQAQMSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVR 60
+ Q+ +Q +A + P + + + T SLYVG+LD V+++ LYD+FS +G V S+R
Sbjct: 12 LEQLNLQ-EAPQTAPTSTDSDSQKVETSTASLYVGELDPTVSEALLYDIFSPIGSVSSIR 70
Query: 61 VCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNI 120
VCRD T+ SLGY YVN+ + +A++ LN+TP+ + RIM+S RDPS+RK G+GNI
Sbjct: 71 VCRDAITKTSLGYAYVNFNDYEAGRQAIEKLNYTPIKGQPCRIMWSQRDPSLRKKGSGNI 130
Query: 121 FIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKLN 179
FIKNL ID+KALHDTFS FGNILSCKIATD +G SKGFGFV FE+ E+A+ AID +N
Sbjct: 131 FIKNLHADIDNKALHDTFSVFGNILSCKIATDEVTGNSKGFGFVHFESDEAAREAIDAIN 190
Query: 180 GMLINDKQVFVGHFLRKQERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITS 237
GML+N ++V+V + +++R++ K F NV++KN+ T +++ ++ F + +TS
Sbjct: 191 GMLLNGQEVYVAPHVSRKDRQSKLEEAKANFTNVYIKNISLETPEQEFEEFFKKVAPVTS 250
Query: 238 AVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQ 297
+ +D +GK + FGFVN+E AAKAVE LNG +F ++ +VG+AQKK ER+QEL+ Q
Sbjct: 251 VHLEKDSEGKLRGFGFVNYETHAGAAKAVEELNGVEFHGQQLHVGRAQKKYERQQELRRQ 310
Query: 298 FEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFV 357
+EQ+ E ++K+QG+NL+IKNL DSIDDE+L+E FS FGTITS KVM +G SKG GFV
Sbjct: 311 YEQSKLEKMEKYQGVNLFIKNLDDSIDDERLREEFSPFGTITSVKVMTTENGKSKGFGFV 370
Query: 358 AFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQF---SQMR--------- 405
FSTPEEA++A+ E N +++ KPLYVA+AQRK+ RR++L Q +QMR
Sbjct: 371 CFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKDVRRSQLAQQIQARNQMRYQQVTAAAA 430
Query: 406 ------------PVAMGPSVPPR-MPMYPPGPSGLGQQFLYGQAPPAIIPPQMPPRGHAY 452
P+ G +PPR +P P P L G P +PPQ G Y
Sbjct: 431 AAAAGMRGQFMPPMFYG-VMPPRGVPFNGPNPQQLA---AMGGMPKNGMPPQQFRNGPMY 486
Query: 453 RYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALSTALANASPEQQR 512
P P AG R A+ Q ++QR
Sbjct: 487 GVP------------------PQGAPQQAGFVRNGANANQ-------------FYQQKQR 515
Query: 513 TLLGESLYPLV--EQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSV 570
LLGE LY V + +AA K+TGM+L++ EV+ LLES E + EA +
Sbjct: 516 QLLGEQLYKKVFARTSDEEAAGKITGMILDLPSQEVVPLLESDELFEQHFKEAFAAYETF 575
Query: 571 AQQQ 574
Q+Q
Sbjct: 576 KQEQ 579
>gi|157125851|ref|XP_001654419.1| polyadenylate-binding protein [Aedes aegypti]
gi|157125853|ref|XP_001654420.1| polyadenylate-binding protein [Aedes aegypti]
gi|94468824|gb|ABF18261.1| polyadenylate-binding protein [Aedes aegypti]
gi|108873484|gb|EAT37709.1| AAEL010318-PB [Aedes aegypti]
gi|108873485|gb|EAT37710.1| AAEL010318-PA [Aedes aegypti]
Length = 628
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 227/392 (57%), Positives = 295/392 (75%), Gaps = 9/392 (2%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL ++T++ L++ FS G VLS+RVCRD+ TRRSLGY YVN+ PADA RALD
Sbjct: 3 SLYVGDLHADITEAILFEKFSSAGPVLSIRVCRDVVTRRSLGYAYVNFQQPADAERALDT 62
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF + + IRIM+S RDPS+RKSG GN+FIKNLDK+ID+KA++DTFS+FGNILSCK+A
Sbjct: 63 MNFDLIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVA 122
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET-VAIKTK-F 208
D G SKG+GFV FE +ESA +I+K+NGML+N K+V+VG F+ ++ERE + K K F
Sbjct: 123 QDEKGNSKGYGFVHFETEESANTSIEKVNGMLLNGKKVYVGRFIPRKEREKELGEKAKLF 182
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NV+VKN + DE LK++F +YGTITS VM DGKS+ FGFV FEN + A AV+
Sbjct: 183 TNVYVKNFGDELNDETLKEMFEKYGTITSHRVMIK-DGKSRGFGFVAFENPESAEHAVQE 241
Query: 269 LNGKKF-DDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEK 327
LNGK+ + + YVG+AQKK+ER+ ELK +FEQ E + ++QG+NLY+KNL DSIDDE+
Sbjct: 242 LNGKELGEGKILYVGRAQKKNERQMELKRRFEQLKMERLTRYQGVNLYVKNLDDSIDDER 301
Query: 328 LKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 387
L++ FS FGTITS KVM + G SKG GFV FS EEA++A+ EMNG+++ SKPLYVA+A
Sbjct: 302 LRKEFSPFGTITSAKVMLE-EGRSKGFGFVCFSAAEEATKAVTEMNGRIVGSKPLYVALA 360
Query: 388 QRKEERRARLQAQFSQ----MRPVAMGPSVPP 415
QRKE+R+A L +Q+ Q MR MG P
Sbjct: 361 QRKEDRKAHLASQYMQRMANMRMQHMGQIFQP 392
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/140 (40%), Positives = 79/140 (56%), Gaps = 13/140 (9%)
Query: 435 QAPPAIIPPQMPP-RGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQP 493
QA P + PQM + A Y +NM++ P A M PV A V
Sbjct: 497 QARP--VAPQMAANQARAANYKYTQNMRNPPAQ--AVPMAAQPVAQQA------VHVKGQ 546
Query: 494 MPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESP 553
P+TA + LA A P +Q+ +LGE L+PL+E L A K+TGMLLE+D +E++H+LE
Sbjct: 547 EPLTA--SMLAAAQPAEQKQMLGERLFPLIEPLYPTIAGKITGMLLEIDNSELVHMLEHS 604
Query: 554 EALKAKVAEAMEVLRSVAQQ 573
E+LKAKV EA+ VL + Q+
Sbjct: 605 ESLKAKVDEAVAVLHAHQQK 624
>gi|302844953|ref|XP_002954016.1| hypothetical protein VOLCADRAFT_82578 [Volvox carteri f.
nagariensis]
gi|300260828|gb|EFJ45045.1| hypothetical protein VOLCADRAFT_82578 [Volvox carteri f.
nagariensis]
Length = 620
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 227/412 (55%), Positives = 295/412 (71%), Gaps = 16/412 (3%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNY---ANPADAAR 86
+SLYVGDL+ +VT++QL++LFS VG V S+RVCRD TRRSLGY YVNY +P A R
Sbjct: 21 SSLYVGDLEKDVTEAQLFELFSSVGPVASIRVCRDAVTRRSLGYAYVNYNSALDPQAAER 80
Query: 87 ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
A++ LN+ LN K +RIM+SHRDPS RKSG GNIFIKNLDKSID KALHDTFS+FG ILS
Sbjct: 81 AMETLNYHVLNGKPMRIMWSHRDPSARKSGVGNIFIKNLDKSIDAKALHDTFSAFGKILS 140
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKT 206
CK+ATD +G SKG+GFV FE++ +A AI +N I K V+VG F ++ +R K
Sbjct: 141 CKVATDANGVSKGYGFVHFEDQAAADRAIQTVNQKEIEGKIVYVGPFQKRADRPQG--KD 198
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
+ NVFVKNL D++L K+ E+G +TSAVVM+D G SK FGF+NF++A+ AAK V
Sbjct: 199 VYTNVFVKNLPAELGDDELSKMATEFGEVTSAVVMKDEKGSSKGFGFINFKDAECAAKCV 258
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
EALN K+ + Y G+AQKK+ERE L+ + E++ +E K+QG+NLY+KNL D +DD+
Sbjct: 259 EALNDKEIGGKVLYAGRAQKKTEREAMLRQKVEESKQERYLKYQGMNLYVKNLADEVDDD 318
Query: 327 KLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 386
L++LF+ GTITSCKVM+D SG SKG GFV F++ +EA+RA+ EMNGKM+ KPLYVA+
Sbjct: 319 ALRDLFTSCGTITSCKVMKDTSGKSKGFGFVCFTSHDEATRAVTEMNGKMVKGKPLYVAL 378
Query: 387 AQRKEERRARLQAQF-------SQMRP----VAMGPSVPPRMPMYPPGPSGL 427
AQRK+ RRA+L+A + RP MGP P MP + GP G+
Sbjct: 379 AQRKDVRRAQLEANVQNRLGMGAMTRPPNPMTGMGPYGPGAMPFFAAGPGGM 430
>gi|119596295|gb|EAW75889.1| hCG2019100, isoform CRA_c [Homo sapiens]
Length = 433
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 218/384 (56%), Positives = 290/384 (75%), Gaps = 4/384 (1%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
ASG+ + SLYVGDL +VT++ LY+ FS G +LS+RVCRD++TRRSLGY Y+N+ P
Sbjct: 3 ASGSGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF L + IRIM+S RDP +RKSG GNIFIKNL+ SID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+A D G S+GFGFV FE E+AQ AI+ +NGML+ND++VFVGHF ++ERE
Sbjct: 123 GNILSCKVACDEHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRREREA 181
Query: 202 V--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
A +F N++VKNL ++ L+ +F ++G + S VMRD G S+CFGFVNFE
Sbjct: 182 ELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
++A KAV +NGK+ R Y G+AQK+ ER+ ELK +FEQ ++ + ++QG+NLY+KNL
Sbjct: 242 EEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
DSIDD+KL++ FS +G ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +
Sbjct: 302 DDSIDDDKLRKEFSPYGVITSAKVMTE-GGHSKGFGFVCFSSPEEATKAVTEMNGRIVGT 360
Query: 380 KPLYVAVAQRKEERRARLQAQFSQ 403
KPLYVA+AQRKEER+A L Q+ Q
Sbjct: 361 KPLYVALAQRKEERKAILTNQYMQ 384
>gi|194753367|ref|XP_001958985.1| GF12652 [Drosophila ananassae]
gi|190620283|gb|EDV35807.1| GF12652 [Drosophila ananassae]
Length = 639
Score = 450 bits (1158), Expect = e-123, Method: Compositional matrix adjust.
Identities = 231/413 (55%), Positives = 293/413 (70%), Gaps = 13/413 (3%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL ++ +S L+D FS G VLS+RVCRD+ +RRSLGY YVN+ PADA RALD
Sbjct: 3 SLYVGDLHQDINESNLFDKFSSAGPVLSIRVCRDVMSRRSLGYAYVNFQQPADAERALDT 62
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF L NK IRIM+S RDPS+R+SG GN+FIKNLDK+ID+KA++DTFS+FGNILSCK+A
Sbjct: 63 MNFDLLRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDKTIDNKAIYDTFSAFGNILSCKVA 122
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET-VAIKTK-F 208
TD SKG+GFV FE +E+A +IDK+NGML+N K+V+VG F+ ++ERE + K K F
Sbjct: 123 TDEKANSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLF 182
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NV+VKN E DE LK+ F YG ITS VM DGKSK FGFV FE + A AV+A
Sbjct: 183 TNVYVKNFTEDFDDEKLKEFFEPYGKITSYKVMSKEDGKSKGFGFVAFETTEAAEAAVQA 242
Query: 269 LNGKKF-DDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEK 327
LNGK + + YV +AQKK+ER+QELK +FE+ K+ D G+NLY+KNL DSIDDE+
Sbjct: 243 LNGKDMGEGKSLYVARAQKKAERQQELKRKFEELKKKRHDSAFGVNLYVKNLDDSIDDER 302
Query: 328 LKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 387
L + FS +GTITS KVM D G SKG GFV F + EA+ A+ E+NG+++ SKPLYVA+A
Sbjct: 303 LCKEFSPYGTITSAKVMTDEEGRSKGFGFVCFISANEATCAVTELNGRVVGSKPLYVALA 362
Query: 388 QRKEERRARLQAQF----SQMRPVAMGPSVPPR------MPMYPPGPSGLGQQ 430
QRKEER+A L +Q+ + MR +G PP +P PP G Q
Sbjct: 363 QRKEERKAHLASQYMRHMTGMRMQQLGQIFPPNAAGGFFVPTMPPNQRFFGPQ 415
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 60/86 (69%), Gaps = 8/86 (9%)
Query: 491 GQPMPI--------TALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMD 542
QPMP +++ LANA P++Q+ +LGE LYP++E++ A K+TGMLLE++
Sbjct: 545 AQPMPPQLQGKNSEKLIASLLANAKPQEQKQILGERLYPMIERMHPSLAGKITGMLLEIE 604
Query: 543 QTEVLHLLESPEALKAKVAEAMEVLR 568
+E+LH++E EALKAKV EA+ VL+
Sbjct: 605 NSELLHMIEDQEALKAKVEEAVAVLQ 630
>gi|355754577|gb|EHH58478.1| hypothetical protein EGM_08341 [Macaca fascicularis]
Length = 637
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 220/402 (54%), Positives = 293/402 (72%), Gaps = 4/402 (0%)
Query: 27 FLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAAR 86
+ T SLYVGDL +VT++ LY+ FS+ G +LS+RVCRD+ TRRS Y YVN+ +P DA R
Sbjct: 8 YPTASLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRSSSYAYVNFQHPKDAER 67
Query: 87 ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
ALD +NF + K +RIM+S RDPS+R+SG GNIF+KNLDKSI++K L+DT S+FGNILS
Sbjct: 68 ALDTMNFDVIKGKPVRIMWSQRDPSLRRSGVGNIFVKNLDKSINNKVLYDTVSAFGNILS 127
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET-VAIK 205
CK+ D +G SKG+GFV FE E+A+ AI+K+NG L+ND++VFVG F ++ERE + K
Sbjct: 128 CKVVCDENG-SKGYGFVHFETHEAAERAIEKMNGTLLNDRKVFVGRFKSRKEREAELGAK 186
Query: 206 TK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAK 264
K F NV++KN E DE LK +FG++G S VM D GKSK FGFV+FE +DA K
Sbjct: 187 AKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDARK 246
Query: 265 AVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSID 324
AV+ +NGK+ + ++ YVG+AQKK ER+ ELK +FEQ ++ + ++Q +NLY+KNL D ID
Sbjct: 247 AVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQVVNLYVKNLDDDID 306
Query: 325 DEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYV 384
DE+L++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +KPLYV
Sbjct: 307 DERLRKAFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Query: 385 AVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSG 426
A+AQRKEER+A L Q+ Q P P P PSG
Sbjct: 366 ALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSG 407
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 108/298 (36%), Positives = 174/298 (58%), Gaps = 16/298 (5%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFEN 167
+PS T ++++ +L + L++ FS G ILS ++ D + +S + +V F++
Sbjct: 2 NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRSSSYAYVNFQH 61
Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
+ A+ A+D +N +I K V + +R+ ++ N+FVKNLD+S ++ L
Sbjct: 62 PKDAERALDTMNFDVIKGKPVRIMW----SQRDPSLRRSGVGNIFVKNLDKSINNKVLYD 117
Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
+G I S V+ D +G SK +GFV+FE + A +A+E +NG +DR+ +VG+ + +
Sbjct: 118 TVSAFGNILSCKVVCDENG-SKGYGFVHFETHEAAERAIEKMNGTLLNDRKVFVGRFKSR 176
Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
ERE EL + ++ N+YIKN G+ +DDE+LK+LF +FG S KVM D
Sbjct: 177 KEREAELGAKAKEF----------PNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE 226
Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
SG SKG GFV+F E+A +A+ EMNGK + K +YV AQ+K ER+ L+ +F QM+
Sbjct: 227 SGKSKGFGFVSFERHEDARKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 284
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 60/83 (72%)
Query: 497 TALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEAL 556
T ++ LA+A P++Q+ +LGE L+P ++ + A K+TGMLLE+D +E+LH+LESPE+L
Sbjct: 545 TLTASMLASAPPQEQKQMLGERLFPPIQAMHPTLAGKITGMLLEIDNSELLHMLESPESL 604
Query: 557 KAKVAEAMEVLRSVAQQQANNPA 579
+KV EA+ VL++ ++A A
Sbjct: 605 HSKVDEAVAVLQAHQAKEATQKA 627
Score = 45.1 bits (105), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
++ +LYV +LD ++ D +L FS G + S +V + RS G+G+V +++P +A
Sbjct: 289 TRYQVVNLYVKNLDDDIDDERLRKAFSPFGTITSAKVM--MEGGRSKGFGFVCFSSPEEA 346
Query: 85 ARALDVLNFTPLNNKSIRIMYSHR 108
+A+ +N + K + + + R
Sbjct: 347 TKAVTEMNGRIVATKPLYVALAQR 370
>gi|68468953|ref|XP_721535.1| hypothetical protein CaO19.3037 [Candida albicans SC5314]
gi|68469502|ref|XP_721264.1| hypothetical protein CaO19.10555 [Candida albicans SC5314]
gi|74680286|sp|Q5AI15.1|PABP_CANAL RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|46443173|gb|EAL02457.1| hypothetical protein CaO19.10555 [Candida albicans SC5314]
gi|46443455|gb|EAL02737.1| hypothetical protein CaO19.3037 [Candida albicans SC5314]
gi|238879187|gb|EEQ42825.1| polyadenylate-binding protein [Candida albicans WO-1]
Length = 629
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 260/596 (43%), Positives = 371/596 (62%), Gaps = 37/596 (6%)
Query: 17 GVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYV 76
G ++G + N + SLYVG+L+ +V ++ L+++FS +GQV S+RVCRD +++SLGY YV
Sbjct: 42 GESSGVAEN---SASLYVGELNPSVNEATLFEIFSPIGQVSSIRVCRDAVSKKSLGYAYV 98
Query: 77 NYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHD 136
NY D +A++ LN+ P+ + RIM+S RDPS R+SG GNIFIKNL +ID+KALHD
Sbjct: 99 NYHKYEDGEKAIEELNYNPIEGRPCRIMWSQRDPSARRSGDGNIFIKNLHPAIDNKALHD 158
Query: 137 TFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRK 196
TFS+FG ILSCK+ATD GQSK FGFV +E E+A+ AI+ +NGML+ND++VFVG + K
Sbjct: 159 TFSAFGKILSCKVATDEFGQSKCFGFVHYETAEAAEAAIENVNGMLLNDREVFVGKHISK 218
Query: 197 QERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFV 254
++RE+ +K F N++VKN+D + ++E +K+F +G ITS + +D DGKSK FGFV
Sbjct: 219 KDRESKFEEMKANFTNIYVKNIDLNYSEESFEKLFSPFGKITSIYLEKDQDGKSKGFGFV 278
Query: 255 NFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNL 314
NFE+ + A KAVE LN K+ + ++ YVG+AQKK ER +ELK Q+E E + K+QG+NL
Sbjct: 279 NFEDHESAVKAVEELNDKEINGQKIYVGRAQKKRERLEELKKQYEAVRLEKLAKYQGVNL 338
Query: 315 YIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNG 374
++KNL D+ID EKL+E F FGTITS KVM D +G SKG GFV F+TPEEA++A+ EMN
Sbjct: 339 FVKNLDDTIDSEKLEEEFKPFGTITSAKVMVDEAGKSKGFGFVCFTTPEEATKAITEMNT 398
Query: 375 KMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLY- 433
+MI KPLYVA+AQRK+ RR++L+ Q + M + +P P GQQ +
Sbjct: 399 RMINGKPLYVALAQRKDVRRSQLEQQIQARNQMRMQNAAAGGLPGQFIPPMFYGQQGFFP 458
Query: 434 ----GQAPPAIIPPQMPPRGHAYRYPL-----GRNMQDFPF---------DMGAGSMLPV 475
G AP PQM RG +P G N Q P D +M P
Sbjct: 459 PNGRGNAPYPGPNPQMMMRGRGQPFPEQWPRPGPNGQPVPVYGIPPQFQQDFNGQNMRPQ 518
Query: 476 PVDM----GAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLV----EQLE 527
G P R+ + + L+ +++ +QQ+ +LGE LYP + + E
Sbjct: 519 QQQQQQPRGGYYPNRNQTSKR-----DLAAIISSVPQDQQKRILGEELYPKIVATGKAQE 573
Query: 528 RDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNPADQLA 583
+AA K+TGM+L ++ E+L LL+ E +A+ + +A A++ A
Sbjct: 574 PEAAGKITGMMLGLENQEILDLLDDDELFNNHFEDALTAFEEYKKSEAAGNAEEQA 629
>gi|195123564|ref|XP_002006275.1| GI18654 [Drosophila mojavensis]
gi|193911343|gb|EDW10210.1| GI18654 [Drosophila mojavensis]
Length = 645
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 232/425 (54%), Positives = 300/425 (70%), Gaps = 9/425 (2%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL ++ ++ L++ FS G VLS+RVCRD+ TRRSLGY YVN+ PADA RALD
Sbjct: 3 SLYVGDLHQDINEAGLFEKFSSAGPVLSIRVCRDVVTRRSLGYAYVNFQQPADAERALDT 62
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF + +K IRIM+S RDPS+R+SG GN+FIKNLDK+ID+KA++DTFS+FGNILSCK+A
Sbjct: 63 MNFDLIRDKPIRIMWSQRDPSLRRSGVGNVFIKNLDKAIDNKAIYDTFSAFGNILSCKVA 122
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET-VAIKTK-F 208
TD G SKG+GFV FE +E+A +IDK+NGML+N K+V+VG F+ ++ERE + K K F
Sbjct: 123 TDEKGTSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLF 182
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NV+VKN E DE LK+ F YG ITS VM DGKSK FGFV +E + A AV+A
Sbjct: 183 TNVYVKNFTEDFDDEKLKEFFEPYGKITSYKVMSKEDGKSKGFGFVAYETTEAAEAAVQA 242
Query: 269 LNGKKF-DDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEK 327
LNGK D + YV +AQKK+ER+QELK +FE+ K+ + G+NLY+KNL DSIDDE+
Sbjct: 243 LNGKDMGDGKTLYVARAQKKAERQQELKRKFEELKKKRHESVFGVNLYVKNLDDSIDDER 302
Query: 328 LKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 387
L++ FS +GTITS KVM D G SKG GFV F +P EA+ A+ E+NG++I SKPLYVA+A
Sbjct: 303 LRKEFSLYGTITSAKVMTDEEGRSKGFGFVCFISPNEATCAVTELNGRVIGSKPLYVALA 362
Query: 388 QRKEERRARLQAQF----SQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPP 443
QRKEER+A L +Q+ + MR +G PP P+ Q +G P P
Sbjct: 363 QRKEERKAHLASQYMRHMTGMRMQQLGQLFPPNTAGGFFVPTMTPSQRFFG--PQITTPM 420
Query: 444 QMPPR 448
+ PR
Sbjct: 421 RSTPR 425
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 56/70 (80%)
Query: 499 LSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKA 558
+++ LANA P++Q+ +LGE LYP++E++ A K+TGMLLE++ +E+LH+LE EALKA
Sbjct: 567 IASLLANAKPQEQKQILGERLYPMIERMHATLAGKITGMLLEIENSELLHMLEDQEALKA 626
Query: 559 KVAEAMEVLR 568
KV EA+ VL+
Sbjct: 627 KVEEAVAVLQ 636
>gi|401625965|gb|EJS43937.1| pab1p [Saccharomyces arboricola H-6]
Length = 577
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 251/561 (44%), Positives = 344/561 (61%), Gaps = 42/561 (7%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVGDL+ V+++ LYD+FS +G V S+RVCRD T+ SLGY YVN+ + +A+
Sbjct: 37 SASLYVGDLEPTVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAI 96
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
D LN+TP+ + RIM+S RDPS+RK G+GNIFIKNL ID+KAL+DTFS FG+ILS K
Sbjct: 97 DQLNYTPIKGRLCRIMWSQRDPSLRKKGSGNIFIKNLHPDIDNKALYDTFSVFGDILSSK 156
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK- 207
IATD +G+SKGFGFV FE + +A+ AID LNGML+N ++++V L ++ER++ +TK
Sbjct: 157 IATDENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQLEETKA 216
Query: 208 -FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
+ N++VKN++ TTDE +++F ++G I SA + +D DGK K FGFVN+EN +DA KAV
Sbjct: 217 HYTNLYVKNINSETTDEKFQEMFAQFGPIVSASLEKDADGKLKGFGFVNYENHEDAVKAV 276
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
EALN + + YVG+AQKK+ER LK Q+E E + K+QG+NL++KNL DS+DDE
Sbjct: 277 EALNESDLNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDE 336
Query: 327 KLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 386
KL+E F+ +GTITS KVMR +G SKG GFV FSTPEEA++A+ E N +++ KPLYVA+
Sbjct: 337 KLEEEFAPYGTITSAKVMRSENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAI 396
Query: 387 AQRKEERRARLQAQF---SQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPP 443
AQRK+ RR++L Q +QMR + P GQ P +
Sbjct: 397 AQRKDVRRSQLAQQIQARNQMRYQQATAAAAAAAAGMP------------GQFMPPMFYG 444
Query: 444 QMPPRGHAYRYPL--------GRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMP 495
MPPRG + P G P G + VP G PR Q
Sbjct: 445 VMPPRGVPFNGPNPQQINPMGGMPKNGMPPQFGNAPVYGVPPQ--GGFPRNANDNNQ--- 499
Query: 496 ITALSTALANASPEQQRTLLGESLYPLV--EQLERDAAAKVTGMLLEMDQTEVLHLLESP 553
++QR LGE LY V + +AA K+TGM+L++ EV LLE+
Sbjct: 500 ----------FYQQKQRQALGEQLYKKVSAKTSNEEAAGKITGMILDLPPQEVFPLLEND 549
Query: 554 EALKAKVAEAMEVLRSVAQQQ 574
E + EA S ++Q
Sbjct: 550 ELFEQHYKEASAAYESFKKEQ 570
>gi|255731137|ref|XP_002550493.1| polyadenylate-binding protein [Candida tropicalis MYA-3404]
gi|240132450|gb|EER32008.1| polyadenylate-binding protein [Candida tropicalis MYA-3404]
Length = 633
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 259/573 (45%), Positives = 362/573 (63%), Gaps = 63/573 (10%)
Query: 17 GVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYV 76
G ++G + N + SLYVG+L+ +V ++ L+++FS +GQV S+RVCRD +++SLGY YV
Sbjct: 39 GDSSGVAEN---SASLYVGELNPSVNEATLFEIFSPIGQVSSIRVCRDAVSKKSLGYAYV 95
Query: 77 NYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHD 136
NY D +A++ LN+TP+ + RIM+S RDPS R+SG GNIFIKNL +ID+KALHD
Sbjct: 96 NYHKFEDGEKAIEELNYTPIEGRPCRIMWSQRDPSARRSGDGNIFIKNLHPAIDNKALHD 155
Query: 137 TFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRK 196
TFS+FG ILSCK+ATD GQSK FGFV +E E+A+ AI+ +NGML+ND++VFVG + K
Sbjct: 156 TFSAFGKILSCKVATDELGQSKCFGFVHYETAEAAEAAIENVNGMLLNDREVFVGKHISK 215
Query: 197 QERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFV 254
++RE+ +K F N++VKN+D + T+E+ +K+F YG ITS + +D DGKSK FGFV
Sbjct: 216 KDRESKFEEMKANFTNIYVKNIDLAYTEEEFEKLFAPYGKITSIYLEKDQDGKSKGFGFV 275
Query: 255 NFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNL 314
NFE D A KAVE LN K+ + ++ YVG+AQKK ER +ELK Q+E E + K+QG+NL
Sbjct: 276 NFEEHDAAVKAVEELNDKEINGQKIYVGRAQKKRERMEELKKQYEAIRLEKLAKYQGVNL 335
Query: 315 YIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNG 374
++KNL DSID EKL+E F FGTITS KVM D +G SKG GFV F+TPEEA++A+ EMN
Sbjct: 336 FVKNLDDSIDSEKLEEEFKPFGTITSAKVMVDDAGKSKGFGFVCFTTPEEATKAITEMNQ 395
Query: 375 KMIVSKPLYVAVAQRKEERRARLQAQFS-----QMRPVAMGPSVPPR-MPMYPPGPSGLG 428
+M+ +KPLYVA+AQRK+ RR++L+ Q +M+ A +P + MP P G
Sbjct: 396 RMVNNKPLYVALAQRKDVRRSQLEQQIQARNQMRMQNAAAAGGLPGQFMP-----PMFYG 450
Query: 429 QQFLY-----GQAPPAIIPPQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPV------ 477
QQ + G AP PQM RG +P + +P G PVPV
Sbjct: 451 QQGFFPPNGRGNAPFPGPNPQMMMRGRGQPFP-----EQWPRPGPNGQ--PVPVYGIPPQ 503
Query: 478 --------------------DMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGE 517
G P R+ + + L+ +A+ +QQ+ +LGE
Sbjct: 504 FQQDFNGQNVRPPQQQQQQQPRGGYYPNRNQTNKR-----DLAAIIASVPQDQQKRILGE 558
Query: 518 SLYPLV----EQLERDAAAKVTGMLLEMDQTEV 546
LYP + + E +AA K+TGM+L ++ E+
Sbjct: 559 ELYPRIVATGKAQEPEAAGKITGMMLGLENQEI 591
>gi|367008356|ref|XP_003678678.1| hypothetical protein TDEL_0A01350 [Torulaspora delbrueckii]
gi|359746335|emb|CCE89467.1| hypothetical protein TDEL_0A01350 [Torulaspora delbrueckii]
Length = 588
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 254/548 (46%), Positives = 346/548 (63%), Gaps = 20/548 (3%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVG+LD +V+++ LYD+FS +G V S+RVCRD T+ SLGY YVN+ + A+
Sbjct: 41 SASLYVGELDPSVSEALLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGKTAI 100
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LN+ P+ RIM+S RDPS+RK G+GNIFIKNL ID+KALHDTFS FGNILSCK
Sbjct: 101 EKLNYAPIKGVPCRIMWSQRDPSMRKKGSGNIFIKNLHPDIDNKALHDTFSVFGNILSCK 160
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKT 206
IATD +G S+GFGFV FE+ E+A+ AID +NGML+N ++V+V + K++R++ K
Sbjct: 161 IATDEAGNSRGFGFVHFEDDEAAKEAIDAINGMLLNGQEVYVAQHVSKKDRQSKLDEAKA 220
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
F NV+VKN+ T DE+ ++ F + G ITSA + +D +GK + FGFVN+EN +DAAKAV
Sbjct: 221 NFTNVYVKNIHPDTGDEEFEEFFTKVGPITSAHLEKDNEGKLRGFGFVNYENHNDAAKAV 280
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
E LN F + +VG+AQKK ER QELK Q+E E ++K+QG+NL++KNL D+IDD+
Sbjct: 281 EELNETDFKGQTLHVGRAQKKHERLQELKKQYEAFRLEKLEKYQGVNLFVKNLDDTIDDQ 340
Query: 327 KLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 386
KL+E F+ +GTITS KVMR +G SKG GFV FSTPEEA++A+ E N +++ KPLYVA+
Sbjct: 341 KLEEEFAPYGTITSVKVMRSENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAI 400
Query: 387 AQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPPQMP 446
AQRK+ RR++L AQ Q R V G + GQ P + MP
Sbjct: 401 AQRKDVRRSQL-AQQIQARNQMRYQQVTAAAAAAAAG--------MRGQFMPPMFYGVMP 451
Query: 447 PRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGA--GIPRRDA-SVGQPMPITALSTAL 503
PRG + P + M M + P G G+P + A GQ M A +
Sbjct: 452 PRGVPFNGPNPQQMAAMG-GMPKNGVPPQQFRNGPVYGVPPQGAPQQGQFMRNGAGANQF 510
Query: 504 ANASPEQQRTLLGESLYPLV--EQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVA 561
++QR +LGE LY V + + +AA K+TGM+L++ EV+ LLES E
Sbjct: 511 YQ---QKQRQVLGEQLYKKVFAKTSDEEAAGKITGMILDLPSQEVVPLLESDELFDQHFK 567
Query: 562 EAMEVLRS 569
EA S
Sbjct: 568 EAFAAYES 575
>gi|328773103|gb|EGF83140.1| hypothetical protein BATDEDRAFT_34010 [Batrachochytrium
dendrobatidis JAM81]
Length = 718
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 216/400 (54%), Positives = 297/400 (74%), Gaps = 8/400 (2%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLY+GDL+ +VT++ L+++F+ VG V S+RVCRD TRRSLGYGY+NY + ADA RALD
Sbjct: 66 SLYIGDLEPSVTEAMLFEVFNMVGPVASIRVCRDAVTRRSLGYGYINYLDIADAERALDT 125
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
LN+T + +RIM+S+RDP++R++GTGNIFIKNL +IDHKALHDTFS+FG ILSCKIA
Sbjct: 126 LNYTTVRGNPVRIMWSNRDPALRRAGTGNIFIKNLHTTIDHKALHDTFSAFGKILSCKIA 185
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTKF 208
DG +S G GFV +E E A+NAI +NGML+ND+QV+VG + K+ER + ++KF
Sbjct: 186 MDGE-RSLGHGFVHYETMEMAENAIKHVNGMLLNDQQVYVGLHISKKERSSTIEEKRSKF 244
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
N++VKN+D S + +++F +GT S V+M D +G SK FGFVN+EN +DA +AVE
Sbjct: 245 TNIYVKNIDASVDQKAFEEMFHPFGTTVSCVLMVDEEGNSKEFGFVNYENHEDARRAVEE 304
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
++ K+ ++ YVG+AQKK ERE+EL+ Q+E+ +E + K+QG+NL++KN+ +SIDDEKL
Sbjct: 305 MHEKEIGGKQIYVGRAQKKFEREEELRRQYEKIREEKLSKYQGVNLFVKNIDESIDDEKL 364
Query: 329 KELFSEFGTITSCKVMRD-PSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 387
++ FS FG ITS K+M D +GISKG GFV FS P+EA++A+ EMN +M+ +KP+YVA+A
Sbjct: 365 RQEFSVFGAITSTKIMVDEKTGISKGFGFVCFSNPDEATKAVTEMNNRMLANKPIYVALA 424
Query: 388 QRKEERRARLQAQFSQMRPVAMGPSVPPRMP----MYPPG 423
QRKE RR +L AQ Q A +PP P YPPG
Sbjct: 425 QRKEVRRQQLAAQMQQRAMRAHQQMMPPGYPGASIFYPPG 464
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%)
Query: 500 STALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAK 559
+ LA+ +QQ+ LGE L+PLV A K+TGMLLEMD E+LHLLESPE L +K
Sbjct: 637 AATLASMPQDQQKRALGEVLFPLVHAQSPQLAGKITGMLLEMDNGELLHLLESPETLASK 696
Query: 560 VAEAMEVLRSVAQQQANNPAD 580
V+EAM L ++ A D
Sbjct: 697 VSEAMIALEEHMREAAATTED 717
>gi|256271306|gb|EEU06376.1| Pab1p [Saccharomyces cerevisiae JAY291]
Length = 577
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 251/561 (44%), Positives = 347/561 (61%), Gaps = 42/561 (7%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVGDL+ +V+++ LYD+FS +G V S+RVCRD T+ SLGY YVN+ + +A+
Sbjct: 37 SASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAI 96
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LN+TP+ + RIM+S RDPS+RK G+GNIFIKNL ID+KAL+DTFS FG+ILS K
Sbjct: 97 EQLNYTPIKGRLCRIMWSQRDPSLRKKGSGNIFIKNLHPDIDNKALYDTFSVFGDILSSK 156
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK- 207
IATD +G+SKGFGFV FE + +A+ AID LNGML+N ++++V L ++ER++ +TK
Sbjct: 157 IATDENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQLEETKA 216
Query: 208 -FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
+ N++VKN++ TTDE +++F ++G I SA + +D DGK K FGFVN+E +DA KAV
Sbjct: 217 HYTNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKLKGFGFVNYEKHEDAVKAV 276
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
EALN + + + YVG+AQKK+ER LK Q+E E + K+QG+NL++KNL DS+DDE
Sbjct: 277 EALNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDE 336
Query: 327 KLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 386
KL+E F+ +GTITS KVMR +G SKG GFV FSTPEEA++A+ E N +++ KPLYVA+
Sbjct: 337 KLEEEFAPYGTITSAKVMRTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAI 396
Query: 387 AQRKEERRARLQAQF---SQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPP 443
AQRK+ RR++L Q +QMR + P GQ P +
Sbjct: 397 AQRKDVRRSQLAQQIQARNQMRYQQATAAAAAAAAGMP------------GQFMPPMFYG 444
Query: 444 QMPPRGHAYRYPLGRNM--------QDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMP 495
MPPRG + P + M P G + VP G PR Q
Sbjct: 445 VMPPRGVPFNGPNPQQMNPMGGMPKNGMPPQFRNGPVYGVPPQ--GGFPRNANDNNQ--- 499
Query: 496 ITALSTALANASPEQQRTLLGESLYPLV--EQLERDAAAKVTGMLLEMDQTEVLHLLESP 553
++QR LGE LY V + +AA K+TGM+L++ EVL LLES
Sbjct: 500 ----------FYQQKQRQALGEQLYKKVSAKTSNEEAAGKITGMILDLPPQEVLPLLESD 549
Query: 554 EALKAKVAEAMEVLRSVAQQQ 574
E + EA S ++Q
Sbjct: 550 ELFEQHYKEASAAYESFKKEQ 570
>gi|156846854|ref|XP_001646313.1| hypothetical protein Kpol_1032p49 [Vanderwaltozyma polyspora DSM
70294]
gi|156116988|gb|EDO18455.1| hypothetical protein Kpol_1032p49 [Vanderwaltozyma polyspora DSM
70294]
Length = 580
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 261/589 (44%), Positives = 356/589 (60%), Gaps = 46/589 (7%)
Query: 4 IQVQHQAQMSGPNGVAA--------GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQ 55
+Q Q +Q +G AA G SG + SLYVG+LD +V+++ LYD+FS +G
Sbjct: 17 LQEQPASQEESSSGSAAEVSSASNGGNSGTAVDSASLYVGELDPSVSEALLYDIFSPIGP 76
Query: 56 VLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKS 115
V S+RVCRD T+ SLGY YVN+ + A++ LN+TP+ K RIM+S RDPS+RK+
Sbjct: 77 VSSIRVCRDAVTKTSLGYAYVNFNDHDSGKVAIEKLNYTPIKGKPCRIMWSQRDPSMRKN 136
Query: 116 GTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAI 175
G+GNIFIKNL ID+KALHDTFS FGNILSCKIATD +G+SKGFGFV FE +A AI
Sbjct: 137 GSGNIFIKNLHADIDNKALHDTFSVFGNILSCKIATDETGKSKGFGFVHFEEDTAASEAI 196
Query: 176 DKLNGMLINDKQVFVGHFLRKQERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYG 233
D +NGM++N +V+V + +++RE+ A K F NV+VKN+D T+E+ +++F ++G
Sbjct: 197 DAINGMMLNGLEVYVAAHVSRKDRESKFEAAKANFTNVYVKNVDLEATEEEFEELFKKFG 256
Query: 234 TITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQE 293
ITS + +D +GK + FGFVN+EN + AAKAV+ LN +F ++ YVG+AQKK ER QE
Sbjct: 257 PITSISMEKDSEGKFRGFGFVNYENHESAAKAVDELNDLEFKSQKLYVGRAQKKYERLQE 316
Query: 294 LKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKG 353
LK Q+E+A E + K+QG+NL++KNL D+IDDE LK+ F FGTITS KVMR+ +G SKG
Sbjct: 317 LKKQYEEAKLEKMAKYQGVNLFVKNLDDTIDDELLKKEFESFGTITSVKVMRNETGKSKG 376
Query: 354 SGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSV 413
GFV FS+PEEA+RA+ E N +++ KPLYVA+AQRK+ RR++L Q + +
Sbjct: 377 FGFVCFSSPEEATRAITEKNQQIVAGKPLYVALAQRKDVRRSQLAQQIQARNQMRYQQAT 436
Query: 414 PPRMPMYPPGPSGLGQQFLYGQAPPAIIPPQMPPRGHAYRYPLGRNMQDFP------FDM 467
P Q YG MPPRG + G N Q F F
Sbjct: 437 AAAAAAAAGIPGQFMQPMFYG---------VMPPRGVPFN---GANPQQFAGMPPQQFRN 484
Query: 468 GAGSMLPVPVDMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLV--EQ 525
GA +P PR D Q + QR LGE LY V +
Sbjct: 485 GAPVYAGMPPQGAGAPPRNDQFFAQ----------------QNQRQALGEELYKKVSAKT 528
Query: 526 LERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQ 574
+ +AA K+TGM+L++ EV+ LLE+ E + EA S ++Q
Sbjct: 529 SDEEAAGKITGMILDLPPQEVMPLLENDELFEQHFKEAFAAYESFKKEQ 577
>gi|225557655|gb|EEH05941.1| polyadenylate-binding protein [Ajellomyces capsulatus G186AR]
gi|240278336|gb|EER41843.1| polyadenylate-binding protein [Ajellomyces capsulatus H143]
gi|325096361|gb|EGC49671.1| polyadenylate-binding protein [Ajellomyces capsulatus H88]
Length = 784
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 240/499 (48%), Positives = 317/499 (63%), Gaps = 73/499 (14%)
Query: 15 PNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYG 74
PN +AG S Q + SLYVG+LD +VT++ L++LFS +GQV S+RVCRD TRRSLGY
Sbjct: 42 PN--SAGPSTTQPHSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYA 99
Query: 75 YVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKAL 134
YVNY N AD RAL+ LN+T + K RIM+S RDP++RK+G GN+FIKNLD +ID+KAL
Sbjct: 100 YVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKAL 159
Query: 135 HDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFL 194
HDTF++FGNILSCK+A D G SKG+GFV +E E+A NAI +NGML+N+K+VFVGH +
Sbjct: 160 HDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHI 219
Query: 195 RKQERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGD-GKSKCF 251
K++R++ +K F NV+VKNLD ++E+ +++F +YG ITSA + RDG+ GKS+ F
Sbjct: 220 AKKDRQSKFEEMKANFTNVYVKNLDTEVSNEEFRELFEKYGEITSASISRDGETGKSRGF 279
Query: 252 GFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQG 311
GFVNF + AA AVE LN K++ ++ YVG+AQKK ERE+EL+ Q E A E K+QG
Sbjct: 280 GFVNFVKHESAAAAVEELNDKEYKGQKLYVGRAQKKHEREEELRKQHEAARVEKASKYQG 339
Query: 312 LNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPS----------------------- 348
+NLY+KNL D IDDEKL++LF FG ITS +VMRD +
Sbjct: 340 VNLYVKNLTDDIDDEKLRDLFISFGNITSARVMRDTAGDPGSESEKEKESANKENVKDEA 399
Query: 349 -----------------------------GISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
G SKG GFV FS P+EAS+A+ EMN +M+
Sbjct: 400 KKESGEEDSADKSDKVEKSDSKNATEKKLGKSKGFGFVCFSNPDEASKAVTEMNQRMVNG 459
Query: 380 KPLYVAVAQRKEERRARLQAQF-------SQMRPVAMGPSVPPRMP--MYPPG-----PS 425
KPLYVA+AQRK+ R+++L+A Q A G S P P YPPG P+
Sbjct: 460 KPLYVALAQRKDVRKSQLEASIQARNTIRQQQVAAAAGMSQPFMQPAVYYPPGQQGFIPA 519
Query: 426 GLGQQ--FLYGQAPPAIIP 442
Q+ +GQ P +IP
Sbjct: 520 NAAQRGGMAFGQQPGMVIP 538
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 57/87 (65%), Gaps = 3/87 (3%)
Query: 480 GAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLL 539
G +P RD SVG P T AL+ A P QQ+ +LGE++YP ++ + + A K+TGMLL
Sbjct: 666 GQAMPPRDESVGGP---TLNLQALSAAPPAQQKQMLGEAIYPKIQAQQPELAGKITGMLL 722
Query: 540 EMDQTEVLHLLESPEALKAKVAEAMEV 566
EMD E+L L++ AL+AKV EA+ V
Sbjct: 723 EMDNAELLSLVDDDAALRAKVDEAINV 749
>gi|82802759|gb|ABB92430.1| PABP3 [Chlorocebus sabaeus]
Length = 635
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/402 (54%), Positives = 292/402 (72%), Gaps = 4/402 (0%)
Query: 27 FLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAAR 86
+ T SLYVGDL +VT++ LY+ FS+ G +LS+RVCRD+ TRR Y YVN+ +P DA R
Sbjct: 8 YPTASLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRYSSYAYVNFQHPKDAER 67
Query: 87 ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
ALD +NF + K +RIM+S RDPS+R+SG GNIF+KNLDKSI++K L+DT S+FGNILS
Sbjct: 68 ALDTMNFDVIKGKPVRIMWSQRDPSLRRSGVGNIFVKNLDKSINNKVLYDTASAFGNILS 127
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AI 204
CK+ D +G SKG+GFV FE E+A+ AI+K+NGML+ND++VFVG F ++ERE A
Sbjct: 128 CKVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAR 186
Query: 205 KTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAK 264
+F NV++KN E DE LK +FG++G S VM D GKSK FGFV+FE +DA K
Sbjct: 187 AKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQK 246
Query: 265 AVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSID 324
AV+ +NGK+ + ++ YVG+AQKK ER+ ELK +FEQ ++ + ++Q +NLY+KNL D ID
Sbjct: 247 AVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQVVNLYVKNLDDDID 306
Query: 325 DEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYV 384
DE+L++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +KPLYV
Sbjct: 307 DERLRKAFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Query: 385 AVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSG 426
A+AQRKEER+A L ++ Q P P P PSG
Sbjct: 366 ALAQRKEERQAHLTNEYMQRMASVRAVPNPVINPYQPAPPSG 407
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 107/298 (35%), Positives = 173/298 (58%), Gaps = 16/298 (5%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFEN 167
+PS T ++++ +L + L++ FS G ILS ++ D + + + +V F++
Sbjct: 2 NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRYSSYAYVNFQH 61
Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
+ A+ A+D +N +I K V + +R+ ++ N+FVKNLD+S ++ L
Sbjct: 62 PKDAERALDTMNFDVIKGKPVRIMW----SQRDPSLRRSGVGNIFVKNLDKSINNKVLYD 117
Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
+G I S V+ D +G SK +GFV+FE + A +A+E +NG +DR+ +VG+ + +
Sbjct: 118 TASAFGNILSCKVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
ERE EL + ++ N+YIKN G+ +DDE+LK+LF +FG S KVM D
Sbjct: 177 KEREAELGARAKEF----------PNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE 226
Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
SG SKG GFV+F E+A +A+ EMNGK + K +YV AQ+K ER+ L+ +F QM+
Sbjct: 227 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 284
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 59/83 (71%)
Query: 497 TALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEAL 556
T ++ LA+A P++Q+ +LGE L+ ++ + A K+TGMLLE+D +E+LH+LES ++L
Sbjct: 544 TLTASMLASAPPQEQKQMLGERLFRPIQAMHPTLAGKITGMLLEIDNSELLHMLESSQSL 603
Query: 557 KAKVAEAMEVLRSVAQQQANNPA 579
++KV EA+ VL++ ++A A
Sbjct: 604 RSKVDEAVAVLQAHQVKEATQKA 626
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
++ +LYV +LD ++ D +L FS G + S +V + RS G+G+V +++P +A
Sbjct: 289 TRYQVVNLYVKNLDDDIDDERLRKAFSPFGTITSAKVM--MEGGRSKGFGFVCFSSPEEA 346
Query: 85 ARALDVLNFTPLNNKSIRIMYSHR 108
+A+ +N + K + + + R
Sbjct: 347 TKAVTEMNGRIVATKPLYVALAQR 370
>gi|193650237|ref|XP_001943392.1| PREDICTED: polyadenylate-binding protein 1-like [Acyrthosiphon
pisum]
Length = 650
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 226/421 (53%), Positives = 308/421 (73%), Gaps = 22/421 (5%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL +VT++ L++ FS VG +LS+RVCR + TR SLGY YVN+ N ADA RALD
Sbjct: 3 SLYVGDLHSDVTEAMLFEKFSTVGAILSIRVCRHVITRSSLGYAYVNFQNIADAERALDT 62
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF L +RIM+S RDPS+RKSG GN+FIKNLD+SID+KA++DTFS+FGNILSCK+A
Sbjct: 63 MNFDILKGHPMRIMWSQRDPSLRKSGVGNVFIKNLDRSIDNKAMYDTFSAFGNILSCKVA 122
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET-VAIKTK-F 208
D +G SKG+GFV FE K+SA +I+K+NGML+N K+VFVG F+ + +RE + + K +
Sbjct: 123 QDETGNSKGYGFVHFETKQSATQSIEKVNGMLLNGKKVFVGRFVGRNDREKELGQRAKLY 182
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NV++KN+DE+ +++L ++F +YGTITS VM DG S+ FGFV FE+ +A KAV
Sbjct: 183 TNVYIKNIDENVNEKELFEMFKKYGTITSCKVMFKDDGSSRGFGFVAFEDPKEAEKAVTE 242
Query: 269 LNGKKF-DDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEK 327
L+GKK + + +YV +AQKK+ER+QELK +FEQ E ++++QG+NLY+KNL D+IDDE+
Sbjct: 243 LHGKKSPEGKTYYVNRAQKKTERQQELKRKFEQYKIERINRYQGVNLYVKNLDDTIDDER 302
Query: 328 LKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 387
L+ FS FGTI S KVM D G SKG GFV FS+PEEA++A+ +MNG+++ +KPLYV +A
Sbjct: 303 LRREFSAFGTIKSAKVMMD-DGRSKGFGFVYFSSPEEATKAVTDMNGRIVGTKPLYVTLA 361
Query: 388 QRKEERRARLQAQFSQ----MRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPP 443
QRK++R+A L +Q+SQ MR ++G P+Y PG S G P I P
Sbjct: 362 QRKKDRKAHLDSQYSQRNTNMRMQSIG-------PIYQPGASN-------GYFVPTIPQP 407
Query: 444 Q 444
Q
Sbjct: 408 Q 408
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 56/75 (74%), Gaps = 2/75 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA T LA A PE Q+ +LGE L+PL+E++ + K+TGMLLE+D +++LH+LE E
Sbjct: 574 PLTA--TMLATAKPEDQKQMLGERLFPLIERMYPELTGKITGMLLEIDNSDLLHMLEHHE 631
Query: 555 ALKAKVAEAMEVLRS 569
+LK +V +A+ +L++
Sbjct: 632 SLKNQVEKAVAMLQA 646
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 17/112 (15%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
N++ +LYV +LD + D +L FS G + S +V D RS G+G+V +++P +A
Sbjct: 282 NRYQGVNLYVKNLDDTIDDERLRREFSAFGTIKSAKVMMDDG--RSKGFGFVYFSSPEEA 339
Query: 85 ARALDVLNFTPLNNKSIRIM---------------YSHRDPSIRKSGTGNIF 121
+A+ +N + K + + YS R+ ++R G I+
Sbjct: 340 TKAVTDMNGRIVGTKPLYVTLAQRKKDRKAHLDSQYSQRNTNMRMQSIGPIY 391
>gi|366999420|ref|XP_003684446.1| hypothetical protein TPHA_0B03420 [Tetrapisispora phaffii CBS 4417]
gi|357522742|emb|CCE62012.1| hypothetical protein TPHA_0B03420 [Tetrapisispora phaffii CBS 4417]
Length = 579
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 249/551 (45%), Positives = 337/551 (61%), Gaps = 40/551 (7%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVG+LD +V+++ LYD+FS +G V S+RVCRD T+ SLGY YVN+ + A+
Sbjct: 49 SASLYVGELDPSVSEALLYDIFSPIGPVTSIRVCRDAITKTSLGYAYVNFNDHESGRTAI 108
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LN++P+ K RIM+S RDP++RK G GNIFIKNL ID+KALHDTFS FGNILSCK
Sbjct: 109 EKLNYSPIKGKPCRIMWSQRDPALRKKGAGNIFIKNLHPDIDNKALHDTFSVFGNILSCK 168
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKT 206
IATD +G+SKGFGFV FE +A A+D +NGM++N ++V+V + K++RE+ +K
Sbjct: 169 IATDETGKSKGFGFVHFEEDNAAVEAVDAINGMMLNGREVYVAQHVSKKDRESKLEEVKA 228
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
F NV+VKN+D T +++ +F +YG ITS + +D +GK + FGF+NFEN DDAAKAV
Sbjct: 229 NFTNVYVKNVDVDTPEDEFTALFSKYGPITSIAMEKDSEGKFRGFGFINFENHDDAAKAV 288
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
E LN +F ++ YVG+AQKK ER QELK Q+E + E + K+QG+NL++KNL DSIDDE
Sbjct: 289 EELNDLEFKGQKLYVGRAQKKYERLQELKKQYEASRLEKLAKYQGVNLFVKNLDDSIDDE 348
Query: 327 KLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 386
KL+ F+ FG+ITS KVMR+ G SK GFV FSTPEEA++A+ E N +++ KPLYVA+
Sbjct: 349 KLEAEFAPFGSITSAKVMRNEEGKSKNFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAI 408
Query: 387 AQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPPQMP 446
AQRK+ RR++L Q + + P Q YG MP
Sbjct: 409 AQRKDVRRSQLAQQIQARNQLRYQQATAAAAAAAAGMPGQFMQPMFYGV---------MP 459
Query: 447 PRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALSTALAN- 505
PRG PF+ G P MGA +PR+ G + N
Sbjct: 460 PRG-------------VPFN---GPNSP----MGA-VPRQQFRNGPVYGVPPQGAPQGNF 498
Query: 506 -----ASPEQQRTLLGESLYPLVEQLERD--AAAKVTGMLLEMDQTEVLHLLESPEALKA 558
++QR LGE LY V D AA K+TGM+L++ EV+ LLE+ E +
Sbjct: 499 PGNDQLYQQKQRQALGEELYKRVSSKTSDEEAAGKITGMILDLPPQEVMPLLENDELFEQ 558
Query: 559 KVAEAMEVLRS 569
EA S
Sbjct: 559 HFNEASAAYES 569
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 96/196 (48%), Gaps = 17/196 (8%)
Query: 204 IKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKC-FGFVNFENADDA 262
+ T +++V LD S ++ L IF G +TS V RD K+ + +VNF + +
Sbjct: 45 VDTTSASLYVGELDPSVSEALLYDIFSPIGPVTSIRVCRDAITKTSLGYAYVNFNDHESG 104
Query: 263 AKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDS 322
A+E LN + + +Q+ ++ G N++IKNL
Sbjct: 105 RTAIEKLNYSPIKGKPCRIMWSQRDPALRKKGAG----------------NIFIKNLHPD 148
Query: 323 IDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPL 382
ID++ L + FS FG I SCK+ D +G SKG GFV F A A+ +NG M+ + +
Sbjct: 149 IDNKALHDTFSVFGNILSCKIATDETGKSKGFGFVHFEEDNAAVEAVDAINGMMLNGREV 208
Query: 383 YVAVAQRKEERRARLQ 398
YVA K++R ++L+
Sbjct: 209 YVAQHVSKKDRESKLE 224
>gi|109120204|ref|XP_001091129.1| PREDICTED: polyadenylate-binding protein 1 isoform 2 [Macaca
mulatta]
Length = 637
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 219/402 (54%), Positives = 292/402 (72%), Gaps = 4/402 (0%)
Query: 27 FLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAAR 86
+ T SLYVGDL +VT++ LY+ FS+ G +LS+RVCRD+ TRRS Y YVN+ +P DA R
Sbjct: 8 YPTASLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRSSSYAYVNFQHPKDAER 67
Query: 87 ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
ALD +NF + K +RIM+S RDPS+R+SG GNIF+KNLDKSI++K L+DT S+FGNILS
Sbjct: 68 ALDTMNFDVIKGKPVRIMWSQRDPSLRRSGVGNIFVKNLDKSINNKVLYDTVSAFGNILS 127
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET-VAIK 205
CK+ D +G SKG+GFV FE E+A+ AI+K+NG L+ND++VFVG F ++ERE + K
Sbjct: 128 CKVVCDENG-SKGYGFVHFETHEAAERAIEKMNGTLLNDRKVFVGRFKSRKEREAELGAK 186
Query: 206 TK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAK 264
K F NV++KN E DE LK +FG++G S VM D GKSK FGFV+FE +DA K
Sbjct: 187 AKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQK 246
Query: 265 AVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSID 324
AV+ +NGK+ + + YVG+AQKK ER+ ELK +FEQ ++ + ++Q +NLY+KNL D ID
Sbjct: 247 AVDEMNGKELNGKHIYVGRAQKKVERQTELKRKFEQMKQDRITRYQVVNLYVKNLDDDID 306
Query: 325 DEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYV 384
DE+L++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +KPLYV
Sbjct: 307 DERLRKAFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Query: 385 AVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSG 426
A+AQRKEER+A L ++ Q P P P PSG
Sbjct: 366 ALAQRKEERQAHLTNEYMQRMASVRAVPNPVINPYQPAPPSG 407
Score = 191 bits (485), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 108/298 (36%), Positives = 174/298 (58%), Gaps = 16/298 (5%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFEN 167
+PS T ++++ +L + L++ FS G ILS ++ D + +S + +V F++
Sbjct: 2 NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRSSSYAYVNFQH 61
Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
+ A+ A+D +N +I K V + +R+ ++ N+FVKNLD+S ++ L
Sbjct: 62 PKDAERALDTMNFDVIKGKPVRIMW----SQRDPSLRRSGVGNIFVKNLDKSINNKVLYD 117
Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
+G I S V+ D +G SK +GFV+FE + A +A+E +NG +DR+ +VG+ + +
Sbjct: 118 TVSAFGNILSCKVVCDENG-SKGYGFVHFETHEAAERAIEKMNGTLLNDRKVFVGRFKSR 176
Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
ERE EL + ++ N+YIKN G+ +DDE+LK+LF +FG S KVM D
Sbjct: 177 KEREAELGAKAKEF----------PNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE 226
Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
SG SKG GFV+F E+A +A+ EMNGK + K +YV AQ+K ER+ L+ +F QM+
Sbjct: 227 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKHIYVGRAQKKVERQTELKRKFEQMK 284
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 61/83 (73%)
Query: 497 TALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEAL 556
T ++ LA+A P++Q+ +LGE L+P ++ + A K+TGMLLE+D +E+LH+LESP++L
Sbjct: 545 TLTASMLASAPPQEQKQMLGERLFPPIQAMHPTLAGKITGMLLEIDNSELLHMLESPQSL 604
Query: 557 KAKVAEAMEVLRSVAQQQANNPA 579
++KV EA+ VL++ ++A A
Sbjct: 605 RSKVDEAVAVLQAHQAKEATQKA 627
Score = 45.1 bits (105), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
++ +LYV +LD ++ D +L FS G + S +V + RS G+G+V +++P +A
Sbjct: 289 TRYQVVNLYVKNLDDDIDDERLRKAFSPFGTITSAKVM--MEGGRSKGFGFVCFSSPEEA 346
Query: 85 ARALDVLNFTPLNNKSIRIMYSHR 108
+A+ +N + K + + + R
Sbjct: 347 TKAVTEMNGRIVATKPLYVALAQR 370
>gi|395745189|ref|XP_002824146.2| PREDICTED: polyadenylate-binding protein 1-like isoform 2 [Pongo
abelii]
Length = 636
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 221/402 (54%), Positives = 291/402 (72%), Gaps = 4/402 (0%)
Query: 27 FLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAAR 86
+ T SLYVGDL +VT++ LY+ FS G +LS+RVCRDL TRRS Y YVN+ +P DA
Sbjct: 8 YPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRRSSNYAYVNFQHPKDAEH 67
Query: 87 ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
ALD +NF + K +RIM+S DPS+RKSG GNIF+KNLDKSI++KAL+DT S+FGNILS
Sbjct: 68 ALDTMNFDVIKGKPVRIMWSQHDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILS 127
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET-VAIK 205
CK+ D +G SKG+GFV FE E+A+ AI+K+NGML+ND++VFVG F ++ERE + K
Sbjct: 128 CKVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAK 186
Query: 206 TK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAK 264
K F NV++KN E DE LK +FG++G S VM D GKSK FGFV+FE +DA K
Sbjct: 187 AKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFEKHEDAQK 246
Query: 265 AVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSID 324
AV+ +NGK+ ++ YVG+AQKK ER+ ELK +FEQ ++ + ++Q +NLY+KNL D ID
Sbjct: 247 AVDEMNGKELSGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQVVNLYVKNLDDDID 306
Query: 325 DEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYV 384
DE+L++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +KPLYV
Sbjct: 307 DERLRKAFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Query: 385 AVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSG 426
A+AQRKEER+A L ++ Q P P P PSG
Sbjct: 366 ALAQRKEERQAYLTNEYMQRMASVRAVPNPVINPYQPAPPSG 407
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 109/298 (36%), Positives = 176/298 (59%), Gaps = 16/298 (5%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATD-GSGQSKGFGFVQFEN 167
+PS T ++++ +L + L++ FS G ILS ++ D + +S + +V F++
Sbjct: 2 NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRRSSNYAYVNFQH 61
Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
+ A++A+D +N +I K V + + Q ++ K+ N+FVKNLD+S ++ L
Sbjct: 62 PKDAEHALDTMNFDVIKGKPVRI---MWSQHDPSLR-KSGVGNIFVKNLDKSINNKALYD 117
Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
+G I S V+ D +G SK +GFV+FE + A +A+E +NG +DR+ +VG+ + +
Sbjct: 118 TVSAFGNILSCKVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
ERE EL + ++ N+YIKN G+ +DDE+LK+LF +FG S KVM D
Sbjct: 177 KEREAELGAKAKEF----------PNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE 226
Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
SG SKG GFV+F E+A +A+ EMNGK + K +YV AQ+K ER+ L+ +F QM+
Sbjct: 227 SGKSKGFGFVSFEKHEDAQKAVDEMNGKELSGKQIYVGRAQKKVERQTELKRKFEQMK 284
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 61/83 (73%)
Query: 497 TALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEAL 556
T ++ LA+A P++Q+ +LGE L+PL+E + A K+TGMLLE+D +E+LH+LESPE+L
Sbjct: 544 TLTASMLASAPPQKQKQMLGERLFPLIEAMRPTLAGKITGMLLEIDNSELLHMLESPESL 603
Query: 557 KAKVAEAMEVLRSVAQQQANNPA 579
+KV EA+ VL++ ++A A
Sbjct: 604 GSKVDEAVAVLQAHQAKEATQKA 626
Score = 45.4 bits (106), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
++ +LYV +LD ++ D +L FS G + S +V + RS G+G+V +++P +A
Sbjct: 289 TRYQVVNLYVKNLDDDIDDERLRKAFSPFGTITSAKVM--MEGGRSKGFGFVCFSSPEEA 346
Query: 85 ARALDVLNFTPLNNKSIRIMYSHR 108
+A+ +N + K + + + R
Sbjct: 347 TKAVTEMNGRIVATKPLYVALAQR 370
>gi|349577826|dbj|GAA22994.1| K7_Pab1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 577
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 250/561 (44%), Positives = 347/561 (61%), Gaps = 42/561 (7%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVGDL+ +V+++ LYD+FS +G V S+RVCRD T+ SLGY YVN+ + +A+
Sbjct: 37 SASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAI 96
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LN+TP+ + RIM+S RDPS+RK G+GNIFIKNL ID+KAL+DTFS FG+ILS K
Sbjct: 97 EQLNYTPIKGRLCRIMWSQRDPSLRKKGSGNIFIKNLHPDIDNKALYDTFSVFGDILSSK 156
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK- 207
IATD +G+SKGFGFV FE + +A+ AID LNGML+N ++++V L ++ER++ +TK
Sbjct: 157 IATDENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQLEETKA 216
Query: 208 -FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
+ N++VKN++ TTDE +++F ++G I SA + +D DGK K FGFVN+E +DA KAV
Sbjct: 217 HYTNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKLKGFGFVNYEKHEDAVKAV 276
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
EALN + + + YVG+AQKK+ER LK Q+E E + K+QG+NL++KNL DS+DDE
Sbjct: 277 EALNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDE 336
Query: 327 KLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 386
KL+E F+ +GTITS KVMR +G SKG GFV FSTPEEA++A+ E N +++ KPLYVA+
Sbjct: 337 KLEEEFAPYGTITSAKVMRTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAI 396
Query: 387 AQRKEERRARLQAQF---SQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPP 443
AQRK+ RR++L Q +QMR + P GQ P +
Sbjct: 397 AQRKDVRRSQLAQQIQARNQMRYQQATAAAAAAAAGMP------------GQFMPPMFYG 444
Query: 444 QMPPRGHAYRYPLGRNM--------QDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMP 495
MPPRG + P + M P G + VP G PR + Q
Sbjct: 445 VMPPRGVPFNGPNPQQMNPMGGMPKNGMPPQFRNGPVYGVPPQ--GGFPRNANNNNQ--- 499
Query: 496 ITALSTALANASPEQQRTLLGESLYPLV--EQLERDAAAKVTGMLLEMDQTEVLHLLESP 553
++QR LGE LY V + +AA K+TGM+L++ EV LLES
Sbjct: 500 ----------FYQQKQRQALGEQLYKKVSAKTSNEEAAGKITGMILDLPPQEVFPLLESD 549
Query: 554 EALKAKVAEAMEVLRSVAQQQ 574
E + EA S ++Q
Sbjct: 550 ELFEQHYKEASAAYESFKKEQ 570
>gi|413956150|gb|AFW88799.1| hypothetical protein ZEAMMB73_294352 [Zea mays]
Length = 735
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 252/599 (42%), Positives = 354/599 (59%), Gaps = 54/599 (9%)
Query: 32 LYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVL 91
LYVGDL +V + L++ FS++G V SVRVCRD +T RSL YGYVNY + ADA ALD L
Sbjct: 123 LYVGDLHEDVAEEHLFEAFSKIGTVTSVRVCRDNATSRSLRYGYVNYFSRADAVVALDKL 182
Query: 92 NFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIAT 151
N + + +K IR+M+S+RDP R+SG GNIF+KNL S+D+ +L + FS FG++LSCK+A
Sbjct: 183 NHSLVLDKPIRVMWSNRDPDARRSGVGNIFVKNLSSSVDNASLQELFSKFGDVLSCKVAK 242
Query: 152 DGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNV 211
+ G S+G+GFVQF ++ESA AI LNG L ND+++ V F++K ER + KF N+
Sbjct: 243 NEDGTSRGYGFVQFTSQESADEAIGNLNGSLFNDRKLHVATFIKKSER-SANNDDKFTNL 301
Query: 212 FVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNG 271
++K+LD+ T+E +K F ++G+I S +M+ DG S FGFV+F+N + A KA +NG
Sbjct: 302 YMKHLDDDITEELVKLKFSQFGSIVSVKIMKRPDGSSLGFGFVSFQNPESAIKAQSTMNG 361
Query: 272 KKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKEL 331
+ YV +AQKK ER+Q L+ E+ E + + N+YIKN+ D +DD+ L+
Sbjct: 362 MLLGSKALYVARAQKKEERKQYLQRLHEEKRNEIMTRCNESNVYIKNIHDEVDDDALRAR 421
Query: 332 FSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKE 391
F EFG ITS KVMRD GIS+G GFV +STPEEA A+ M G M KPLYVA+ QRKE
Sbjct: 422 FVEFGNITSAKVMRDDKGISRGFGFVCYSTPEEAKSAVNNMRGVMFFGKPLYVAIFQRKE 481
Query: 392 ERRARLQAQFSQM---------------------RPVAMGPSVPPRMP-MYPPGPSGLGQ 429
ER+A+LQ F+Q+ P P PPR +YP P GL
Sbjct: 482 ERKAKLQQHFAQLARMVGPANSMIPTGYPQVYFAHPSTHIPQGPPRHGFVYP--PMGLSH 539
Query: 430 QFLYGQAPPA-----IIPPQMPPRGHAYRYPLGR---NMQDFPFDMGAGSML--PVPVDM 479
++ PPA I P MP YR GR NM P + + + P P
Sbjct: 540 EWRPSMFPPAPNLQQIHSPVMPNSPRHYRSNRGRMGGNMMPLPHAVHTMNYMTHPQPAKE 599
Query: 480 GAGIPRR---------------DASVGQPMPITAL----STALANASPEQQRTLLGESLY 520
+PR+ ++ Q P++ + S LA+A P +Q+ LLG LY
Sbjct: 600 FMSLPRQRFNHPKYFSNDVMANSLAIHQSDPVSTMNDSFSNYLASAPPAEQKNLLGNRLY 659
Query: 521 PLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNPA 579
PLVE+ + + A+K+TGMLLE+D +EV+ LL S E L KV E +++L++ + ++ A
Sbjct: 660 PLVERHQPELASKITGMLLELDNSEVVTLLCSSEMLSVKVDECVQLLQATKPKAEDHEA 718
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 101/187 (54%), Gaps = 17/187 (9%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
T+LY+ LD ++T+ + FSQ G ++SV++ + SLG+G+V++ NP A +A
Sbjct: 299 TNLYMKHLDDDITEELVKLKFSQFGSIVSVKIMKRPDG-SSLGFGFVSFQNPESAIKAQS 357
Query: 90 VLNFTPLNNKSI----------------RIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKA 133
+N L +K++ R+ R+ + + N++IKN+ +D A
Sbjct: 358 TMNGMLLGSKALYVARAQKKEERKQYLQRLHEEKRNEIMTRCNESNVYIKNIHDEVDDDA 417
Query: 134 LHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHF 193
L F FGNI S K+ D G S+GFGFV + E A++A++ + G++ K ++V F
Sbjct: 418 LRARFVEFGNITSAKVMRDDKGISRGFGFVCYSTPEEAKSAVNNMRGVMFFGKPLYVAIF 477
Query: 194 LRKQERE 200
RK+ER+
Sbjct: 478 QRKEERK 484
>gi|344228406|gb|EGV60292.1| hypothetical protein CANTEDRAFT_136776 [Candida tenuis ATCC 10573]
Length = 647
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 263/592 (44%), Positives = 362/592 (61%), Gaps = 49/592 (8%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVG+L+ +V ++ L+++FS +GQV S+RVCRD T++SLGY YVN+ D +A+
Sbjct: 50 SASLYVGELNTSVNEALLFEIFSPIGQVSSIRVCRDAVTKKSLGYAYVNFVKFDDGEQAI 109
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LN++ + + RIM+S RDPS+R++G GNIFIKNL +ID+KALHDTFS+FG ILSCK
Sbjct: 110 EDLNYSLIEGRPCRIMWSQRDPSLRRNGEGNIFIKNLHPAIDNKALHDTFSAFGRILSCK 169
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKT 206
+ATD G SK FGFV +E E+A+ AI+ +NGML+ND++VFVG + K++RE+ +K
Sbjct: 170 VATDELGNSKCFGFVHYETAEAAEAAIENVNGMLLNDREVFVGKHVSKKDRESKFEEMKA 229
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
F NVFVKNL TD++LK++F YG ITS+ + +D +GKSK FGFVNF+N +DA KAV
Sbjct: 230 NFTNVFVKNLAPEYTDQELKELFSAYGPITSSYLEKDLEGKSKGFGFVNFDNHNDAVKAV 289
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
+ LN K+ + YVG+AQKK ER +EL+ Q+E E + K+QG+NL+IKNL D+ID E
Sbjct: 290 DELNNKEIAGQPIYVGRAQKKRERMEELRRQYEATKLEKLSKYQGVNLFIKNLDDTIDSE 349
Query: 327 KLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 386
KL+ F FG ITS +VM D G SKG GFV FS+PEEA++A+ EMN +M+ KPLYVA+
Sbjct: 350 KLENEFKPFGNITSARVMVDEQGKSKGFGFVCFSSPEEATKAITEMNQRMVEGKPLYVAL 409
Query: 387 AQRKEERRARLQAQF---SQMR-------PVAMGPSVPPRM--PMY---------PPGPS 425
AQRK+ RR++L+ Q +QMR A G ++P + PM+ PPG +
Sbjct: 410 AQRKDVRRSQLEQQIQARNQMRMQNAAAAAAAAGGAIPGQFMNPMFYGQQPGFFPPPGAN 469
Query: 426 GLGQQFLYGQAPPAIIPPQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDM------ 479
G G+ A P P P A R Q P GAG P P
Sbjct: 470 G-GRPNGANGAGPNAGPNANPQMMMAAAAAAARGGQIPPPQAGAGWGRPNPNGQQIPPVY 528
Query: 480 ---------------GAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVE 524
GA P G+P L+ L++ PEQQ+ +LGE LYP +
Sbjct: 529 GMPPVYQNGPNGQPRGAPAPGMYPPNGRPTKARDLAAILSSVPPEQQKRILGEELYPKIV 588
Query: 525 QLER----DAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQ 572
R +AA K+TGM+L++D E+L LLE E +A+ Q
Sbjct: 589 STGRANEPEAAGKITGMMLDLDNQEILSLLEDDELFNNHFEDALTAYEEYKQ 640
>gi|324509105|gb|ADY43836.1| Polyadenylate-binding protein 1, partial [Ascaris suum]
Length = 661
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 235/437 (53%), Positives = 302/437 (69%), Gaps = 16/437 (3%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL +VT++ L++ FS G VLS+RVCRD TRRSLGY YVN+ PADA RALD
Sbjct: 20 SLYVGDLHPDVTEAMLFEKFSSAGPVLSIRVCRDAITRRSLGYAYVNFQQPADAERALDT 79
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF + K IRIM+S RDPS+R+SG GNIFIKNLDKSID+KA++DTFS FGNILSCK+A
Sbjct: 80 MNFDVMYGKPIRIMWSQRDPSMRRSGAGNIFIKNLDKSIDNKAIYDTFSMFGNILSCKVA 139
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRK--QERETVAIKTKF 208
D SKG+GFV FE +ESAQ AI+K+NGML+ K+V+VG F + + RE +F
Sbjct: 140 NDEESNSKGYGFVHFETEESAQKAIEKVNGMLLEGKKVYVGKFQPRAARMREMGETARRF 199
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NVF+KN + E L+K+F ++G ITS VM D DGKSK FGFV FEN +DA KAV
Sbjct: 200 TNVFIKNFADELDKEKLEKLFAKFGKITSCAVMSDADGKSKGFGFVAFENPEDAEKAVNE 259
Query: 269 LNGKKFDD--REWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
++ + D R+ YV +AQKK+ER ELK ++EQ E + ++QG+NLY+KNL D++DDE
Sbjct: 260 MHEYQLPDSERKLYVCRAQKKNERSAELKRRYEQQKVERMQRYQGVNLYVKNLDDTVDDE 319
Query: 327 KLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 386
L++ F +G ITS KVM D +G SKG GFV F P+EA++A+ EMNGKM+ +KPLYVA+
Sbjct: 320 VLRQNFESYGKITSAKVMCDDNGRSKGFGFVCFEKPDEATKAVTEMNGKMMCTKPLYVAL 379
Query: 387 AQRKEERRARLQAQFSQMRPVAMGPSVPPRMP--MYPPGPSG------LGQQFLYGQAPP 438
AQRKE+R+A+L +Q+ Q R ++ MP MY PG G L Q P
Sbjct: 380 AQRKEDRKAQLASQYMQ-RLASIRMHNAGAMPGTMYTPGNGGFFVSSALQNQRAATFMPT 438
Query: 439 AIIP-PQMPPRGHAYRY 454
A IP QM RG A R+
Sbjct: 439 ATIPGAQM--RGSAPRW 453
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 55/77 (71%), Gaps = 3/77 (3%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDA-AAKVTGMLLEMDQTEVLHLLESP 553
P+TA LA A P++Q+ +LGE +YPL+E++ + K+TGM+LEMD +E+L +LE+
Sbjct: 582 PLTA--HMLAQALPQEQKQMLGERIYPLIERIYQGPDVGKITGMMLEMDNSELLMMLENE 639
Query: 554 EALKAKVAEAMEVLRSV 570
E L++KV+EA VL S
Sbjct: 640 ELLQSKVSEAASVLASA 656
>gi|172092|gb|AAA34838.1| polyadenylate-binding protein [Saccharomyces cerevisiae]
Length = 577
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 250/561 (44%), Positives = 346/561 (61%), Gaps = 42/561 (7%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVGDL+ +V+++ LYD+FS +G V S+RVCRD T+ SLGY YVN+ + +A+
Sbjct: 37 SASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAI 96
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LN+TP+ + RIM+S RDPS+RK G+GNIFIKNL ID+KAL+DTFS FG+ILS K
Sbjct: 97 EQLNYTPIKGRLCRIMWSQRDPSLRKKGSGNIFIKNLHPDIDNKALYDTFSVFGDILSSK 156
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK- 207
IATD +G+SKGFGFV FE + +A+ AID LNGML+N ++++V L ++ER++ +TK
Sbjct: 157 IATDENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQLEETKA 216
Query: 208 -FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
+ N++VKN++ TTDE +++F ++G I SA + +D DGK K FGFVN+E +DA KAV
Sbjct: 217 HYTNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKLKGFGFVNYEKHEDAVKAV 276
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
EALN + + + YVG+AQKK+ER LK Q+E E + K+QG+NL++KNL DS+DDE
Sbjct: 277 EALNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDE 336
Query: 327 KLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 386
KL+E F+ +GTITS KVMR +G SKG GFV FSTPEEA++A+ E N +++ KPLYVA+
Sbjct: 337 KLEEEFAPYGTITSAKVMRTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAI 396
Query: 387 AQRKEERRARLQAQF---SQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPP 443
AQRK+ RR++L Q +QMR + P GQ P +
Sbjct: 397 AQRKDVRRSQLAQQIQARNQMRYQQATAARAAAAAGMP------------GQFMPPMFYG 444
Query: 444 QMPPRGHAYRYPLGRNM--------QDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMP 495
MPPRG + P + M P G + VP G PR Q
Sbjct: 445 VMPPRGVPFNGPNPQQMNPMGGMPKNGMPPQFRNGPVYGVPPQ--GGFPRNANDNNQ--- 499
Query: 496 ITALSTALANASPEQQRTLLGESLYPLV--EQLERDAAAKVTGMLLEMDQTEVLHLLESP 553
++QR LGE LY V + +AA K+TGM+L++ EV LLES
Sbjct: 500 ----------FYQQKQRQALGEQLYKKVSAKTSNEEAAGKITGMILDLPPQEVFPLLESD 549
Query: 554 EALKAKVAEAMEVLRSVAQQQ 574
E + EA S ++Q
Sbjct: 550 ELFEQHYKEASAAYESFKKEQ 570
>gi|6321013|ref|NP_011092.1| Pab1p [Saccharomyces cerevisiae S288c]
gi|417441|sp|P04147.4|PABP_YEAST RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=ARS consensus-binding protein ACBP-67;
AltName: Full=Polyadenylate tail-binding protein
gi|171967|gb|AAA34787.1| poly (A)-binding protein [Saccharomyces cerevisiae]
gi|218386|dbj|BAA00017.1| polyadenylate-binding protein [Saccharomyces cerevisiae]
gi|603406|gb|AAB64692.1| Pab1p: polyadenylate-binding protein [Saccharomyces cerevisiae]
gi|51013159|gb|AAT92873.1| YER165W [Saccharomyces cerevisiae]
gi|151944882|gb|EDN63141.1| poly(A) binding protein [Saccharomyces cerevisiae YJM789]
gi|207345803|gb|EDZ72507.1| YER165Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259146093|emb|CAY79353.1| Pab1p [Saccharomyces cerevisiae EC1118]
gi|285811799|tpg|DAA07827.1| TPA: Pab1p [Saccharomyces cerevisiae S288c]
gi|365765943|gb|EHN07446.1| Pab1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299869|gb|EIW10961.1| Pab1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 577
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 250/561 (44%), Positives = 346/561 (61%), Gaps = 42/561 (7%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVGDL+ +V+++ LYD+FS +G V S+RVCRD T+ SLGY YVN+ + +A+
Sbjct: 37 SASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAI 96
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LN+TP+ + RIM+S RDPS+RK G+GNIFIKNL ID+KAL+DTFS FG+ILS K
Sbjct: 97 EQLNYTPIKGRLCRIMWSQRDPSLRKKGSGNIFIKNLHPDIDNKALYDTFSVFGDILSSK 156
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK- 207
IATD +G+SKGFGFV FE + +A+ AID LNGML+N ++++V L ++ER++ +TK
Sbjct: 157 IATDENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQLEETKA 216
Query: 208 -FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
+ N++VKN++ TTDE +++F ++G I SA + +D DGK K FGFVN+E +DA KAV
Sbjct: 217 HYTNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKLKGFGFVNYEKHEDAVKAV 276
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
EALN + + + YVG+AQKK+ER LK Q+E E + K+QG+NL++KNL DS+DDE
Sbjct: 277 EALNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDE 336
Query: 327 KLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 386
KL+E F+ +GTITS KVMR +G SKG GFV FSTPEEA++A+ E N +++ KPLYVA+
Sbjct: 337 KLEEEFAPYGTITSAKVMRTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAI 396
Query: 387 AQRKEERRARLQAQF---SQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPP 443
AQRK+ RR++L Q +QMR + P GQ P +
Sbjct: 397 AQRKDVRRSQLAQQIQARNQMRYQQATAAAAAAAAGMP------------GQFMPPMFYG 444
Query: 444 QMPPRGHAYRYPLGRNM--------QDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMP 495
MPPRG + P + M P G + VP G PR Q
Sbjct: 445 VMPPRGVPFNGPNPQQMNPMGGMPKNGMPPQFRNGPVYGVPPQ--GGFPRNANDNNQ--- 499
Query: 496 ITALSTALANASPEQQRTLLGESLYPLV--EQLERDAAAKVTGMLLEMDQTEVLHLLESP 553
++QR LGE LY V + +AA K+TGM+L++ EV LLES
Sbjct: 500 ----------FYQQKQRQALGEQLYKKVSAKTSNEEAAGKITGMILDLPPQEVFPLLESD 549
Query: 554 EALKAKVAEAMEVLRSVAQQQ 574
E + EA S ++Q
Sbjct: 550 ELFEQHYKEASAAYESFKKEQ 570
>gi|14029147|gb|AAK51123.1| polyadenylated mRNA-binding protein 2 [Anemia phyllitidis]
Length = 472
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 265/477 (55%), Positives = 314/477 (65%), Gaps = 68/477 (14%)
Query: 180 GMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAV 239
GMLINDKQV V F+R+QERE TKFNNVFVKNL E TTDEDL ++FG +G I+SAV
Sbjct: 1 GMLINDKQVVVTPFVRRQERELTNAATKFNNVFVKNLAEETTDEDLMEVFGGFGPISSAV 60
Query: 240 VMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFE 299
VMRD +G SKCFGFVNF+NADDAAKAVE +NGK F+D+EWYVG+AQKKSERE ELK +FE
Sbjct: 61 VMRDANGNSKCFGFVNFKNADDAAKAVENINGKVFNDKEWYVGRAQKKSEREAELKVKFE 120
Query: 300 QAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAF 359
Q KE +KFQG+NLY+KN+ DSIDDEKLKELFS FGT+ SCK+MR P G GSGFVA
Sbjct: 121 QLRKERTEKFQGVNLYLKNVDDSIDDEKLKELFSGFGTVNSCKIMRSPQGQIVGSGFVAL 180
Query: 360 STPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVP----P 415
S+ +EA RA+ EMNGKM+ SKPLYVAVAQRK+ERRA+LQAQF+Q+R V +VP
Sbjct: 181 SSKDEAMRAVNEMNGKMVGSKPLYVAVAQRKDERRAKLQAQFAQLRNVVA--NVPQMNGS 238
Query: 416 RMPMYPPGPSGLGQQFLYGQAPPAIIPPQMPPRGHAYRYPL-------GRNMQDF----- 463
P+YPP P +GQQ YGQ P ++PPQ P G Y++P+ G M ++
Sbjct: 239 PGPLYPPRPPAMGQQVYYGQPPHGLLPPQ--PSGFGYQHPMVPGMRPGGPQMPNYFLPAV 296
Query: 464 --PFDMG--AGSMLPVP---------------VDMGAGIPRRDASVGQPMPITAL----- 499
P G G+ P P G P R + + P +L
Sbjct: 297 QRPGQQGQRMGNRRPGPPFLHQQQQPLMQQQMAPRGNSRPMRYSQSSRVAPDVSLQGYSS 356
Query: 500 ---STALANAS-----------------PEQQRTLLGESLYPLVEQLERDAAAKVTGMLL 539
AL N+S PEQQR +LGE LYPLV++LE D A KVTGMLL
Sbjct: 357 LDMGGALPNSSDTGLYMPALASALASASPEQQRVMLGEQLYPLVDRLEHDHAGKVTGMLL 416
Query: 540 EMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQA---NNPADQLASLSLNENLVS 593
EMDQTEVLHL+ESPEALKAKVAEAM+VL+ +AQ A N D ASLSLNE L S
Sbjct: 417 EMDQTEVLHLIESPEALKAKVAEAMDVLQ-MAQANAGASTNGIDHFASLSLNEPLAS 472
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/195 (37%), Positives = 110/195 (56%), Gaps = 14/195 (7%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKL 178
N+F+KNL + + L + F FG I S + D +G SK FGFV F+N + A A++ +
Sbjct: 31 NVFVKNLAEETTDEDLMEVFGGFGPISSAVVMRDANGNSKCFGFVNFKNADDAAKAVENI 90
Query: 179 NGMLINDKQVFVGHFLRKQERETVAIKTKFN-------------NVFVKNLDESTTDEDL 225
NG + NDK+ +VG +K ERE +K KF N+++KN+D+S DE L
Sbjct: 91 NGKVFNDKEWYVGRAQKKSEREA-ELKVKFEQLRKERTEKFQGVNLYLKNVDDSIDDEKL 149
Query: 226 KKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQ 285
K++F +GT+ S +MR G+ GFV + D+A +AV +NGK + YV AQ
Sbjct: 150 KELFSGFGTVNSCKIMRSPQGQIVGSGFVALSSKDEAMRAVNEMNGKMVGSKPLYVAVAQ 209
Query: 286 KKSEREQELKGQFEQ 300
+K ER +L+ QF Q
Sbjct: 210 RKDERRAKLQAQFAQ 224
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 96/186 (51%), Gaps = 17/186 (9%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
+++V +L TD L ++F G + S V RD + S +G+VN+ N DAA+A++
Sbjct: 30 NNVFVKNLAEETTDEDLMEVFGGFGPISSAVVMRD-ANGNSKCFGFVNFKNADDAAKAVE 88
Query: 90 VLNFTPLNNKSIRIMYSHRDPS-----------IRKSGTG-----NIFIKNLDKSIDHKA 133
+N N+K + + + +RK T N+++KN+D SID +
Sbjct: 89 NINGKVFNDKEWYVGRAQKKSEREAELKVKFEQLRKERTEKFQGVNLYLKNVDDSIDDEK 148
Query: 134 LHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHF 193
L + FS FG + SCKI GQ G GFV +K+ A A++++NG ++ K ++V
Sbjct: 149 LKELFSGFGTVNSCKIMRSPQGQIVGSGFVALSSKDEAMRAVNEMNGKMVGSKPLYVAVA 208
Query: 194 LRKQER 199
RK ER
Sbjct: 209 QRKDER 214
>gi|50306049|ref|XP_452986.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74690315|sp|Q6CSV3.1|PABP_KLULA RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|49642119|emb|CAH01837.1| KLLA0C17600p [Kluyveromyces lactis]
Length = 592
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 249/556 (44%), Positives = 348/556 (62%), Gaps = 26/556 (4%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
SLYVG+LD N+T++ LYD+FS +G + S+RVCRD T+ SLGY YVNY + +A+
Sbjct: 49 NASLYVGELDPNITEALLYDVFSPLGPISSIRVCRDAVTKASLGYAYVNYTDYEAGKKAI 108
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
LN+ +N + RIM+S RDP+IRK G+GNIFIKNL +ID+KALH+TFS+FG +LSCK
Sbjct: 109 QELNYAEINGRPCRIMWSERDPAIRKKGSGNIFIKNLHPAIDNKALHETFSTFGEVLSCK 168
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER--ETVAIKT 206
+A D +G S+GFGFV F+ + A++AI+ +NGML+N +V+V + K++R + K
Sbjct: 169 VALDENGNSRGFGFVHFKEESDAKDAIEAVNGMLMNGLEVYVAMHVPKKDRISKLEEAKA 228
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
F N++VKN+D TTDE+ +++F +YG I SA + +D +GK K FGFVNF + + AAKAV
Sbjct: 229 NFTNIYVKNIDVETTDEEFEQLFSQYGEIVSAALEKDAEGKPKGFGFVNFVDHNAAAKAV 288
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
E LNGK+F + YVG+AQKK ER +ELK Q+EQ E + KFQG+NL+IKNL DSIDDE
Sbjct: 289 EELNGKEFKSQALYVGRAQKKYERAEELKKQYEQYRLEKLAKFQGVNLFIKNLDDSIDDE 348
Query: 327 KLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 386
KLKE F+ +GTITS +VMRD G SKG GFV FS+PEEA++A+ E N +++ KPLYVA+
Sbjct: 349 KLKEEFAPYGTITSARVMRDQEGNSKGFGFVCFSSPEEATKAMTEKNQQIVAGKPLYVAI 408
Query: 387 AQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPPQMP 446
AQRK+ RR++L Q + + G + GQ P + M
Sbjct: 409 AQRKDVRRSQLAQQIQARNQIRFQQQQQQQAAAAAAG--------MPGQYMPQMFYGVMA 460
Query: 447 PRGHAYRYPLGRNMQDFPFDMGAG----SMLPVPVDMGAGIPRRDASVGQPMPITAL--S 500
PRG +P + P MGAG M+P P AG P G P P
Sbjct: 461 PRG----FPGPNPGMNGP--MGAGIPKNGMVPPPQQF-AGRPNGPMYQGMP-PQNQFPRH 512
Query: 501 TALANASPEQQRTLLGESLYPLVEQL--ERDAAAKVTGMLLEMDQTEVLHLLESPEALKA 558
++QR LGE LY V + +AA K+TGM+L++ +V+ LL++ E +
Sbjct: 513 QQQHYIQQQKQRQALGEQLYKKVSAKIDDENAAGKITGMILDLPPQQVIQLLDNDEQFEQ 572
Query: 559 KVAEAMEVLRSVAQQQ 574
+ EA+ + ++Q
Sbjct: 573 QFQEALAAYENFKKEQ 588
>gi|195381687|ref|XP_002049579.1| GJ21671 [Drosophila virilis]
gi|194144376|gb|EDW60772.1| GJ21671 [Drosophila virilis]
Length = 645
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 219/374 (58%), Positives = 283/374 (75%), Gaps = 3/374 (0%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL ++ ++ L++ FS G VLS+RVCRD+ TRRSLGY YVN+ PADA RALD
Sbjct: 3 SLYVGDLHQDINEAGLFEKFSTAGPVLSIRVCRDVVTRRSLGYAYVNFQQPADAERALDT 62
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF + NK IRIM+S RDPS+R+SG GN+FIKNLDK+ID+KA++DTFS+FGNILSCK+A
Sbjct: 63 MNFDLIRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDKAIDNKAIYDTFSAFGNILSCKVA 122
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET-VAIKTK-F 208
TD G SKG+GFV FE +E+A +IDK+NGML+N K+V+VG F+ ++ERE + K K F
Sbjct: 123 TDEKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLF 182
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NV+VKN E DE LK+ F YG ITS VM DGKSK FGFV +E + A AV+A
Sbjct: 183 TNVYVKNFTEEFDDEKLKEFFEPYGKITSYKVMSKEDGKSKGFGFVAYETTEAAEAAVQA 242
Query: 269 LNGKKF-DDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEK 327
LNGK + + YV +AQKK+ER+QELK +FE+ K+ + G+NLY+KNL DSIDDE+
Sbjct: 243 LNGKDMGEGKSLYVARAQKKAERQQELKRKFEELKKKRHESVFGVNLYVKNLDDSIDDER 302
Query: 328 LKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 387
L++ FS +GTITS KVM D G SKG GFV F +P EA+ A+ E+NG+++ SKPLYVA+A
Sbjct: 303 LRKEFSLYGTITSAKVMTDDEGRSKGFGFVCFISPNEATCAVTELNGRVVGSKPLYVALA 362
Query: 388 QRKEERRARLQAQF 401
QRKEER+A L +Q+
Sbjct: 363 QRKEERKAHLASQY 376
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 104/289 (35%), Positives = 165/289 (57%), Gaps = 16/289 (5%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDK 177
++++ +L + I+ L + FS+ G +LS ++ D + +S G+ +V F+ A+ A+D
Sbjct: 3 SLYVGDLHQDINEAGLFEKFSTAGPVLSIRVCRDVVTRRSLGYAYVNFQQPADAERALDT 62
Query: 178 LNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITS 237
+N LI +K + + +R+ ++ NVF+KNLD++ ++ + F +G I S
Sbjct: 63 MNFDLIRNKPIRIMW----SQRDPSLRRSGVGNVFIKNLDKAIDNKAIYDTFSAFGNILS 118
Query: 238 AVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQ 297
V D G SK +GFV+FE + A +++ +NG + ++ YVGK + ERE+EL
Sbjct: 119 CKVATDEKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKEREKELG-- 176
Query: 298 FEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFV 357
E+A T N+Y+KN + DDEKLKE F +G ITS KVM G SKG GFV
Sbjct: 177 -EKAKLFT-------NVYVKNFTEEFDDEKLKEFFEPYGKITSYKVMSKEDGKSKGFGFV 228
Query: 358 AFSTPEEASRALAEMNGK-MIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
A+ T E A A+ +NGK M K LYVA AQ+K ER+ L+ +F +++
Sbjct: 229 AYETTEAAEAAVQALNGKDMGEGKSLYVARAQKKAERQQELKRKFEELK 277
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 103/292 (35%), Positives = 160/292 (54%), Gaps = 22/292 (7%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ +LD + + +YD FS G +LS +V D S GYG+V++ A ++D
Sbjct: 91 NVFIKNLDKAIDNKAIYDTFSAFGNILSCKVATD-EKGNSKGYGFVHFETEEAANTSIDK 149
Query: 91 LNFTPLNNKSIRI-MYSHRDPSIRKSGT-----GNIFIKNLDKSIDHKALHDTFSSFGNI 144
+N LN K + + + R ++ G N+++KN + D + L + F +G I
Sbjct: 150 VNGMLLNGKKVYVGKFIPRKEREKELGEKAKLFTNVYVKNFTEEFDDEKLKEFFEPYGKI 209
Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLIND-KQVFVGHFLRKQERETVA 203
S K+ + G+SKGFGFV +E E+A+ A+ LNG + + K ++V +K ER+
Sbjct: 210 TSYKVMSKEDGKSKGFGFVAYETTEAAEAAVQALNGKDMGEGKSLYVARAQKKAERQQ-E 268
Query: 204 IKTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKC 250
+K KF N++VKNLD+S DE L+K F YGTITSA VM D +G+SK
Sbjct: 269 LKRKFEELKKKRHESVFGVNLYVKNLDDSIDDERLRKEFSLYGTITSAKVMTDDEGRSKG 328
Query: 251 FGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAM 302
FGFV F + ++A AV LNG+ + YV AQ+K ER+ L Q+ + M
Sbjct: 329 FGFVCFISPNEATCAVTELNGRVVGSKPLYVALAQRKEERKAHLASQYMRHM 380
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 55/70 (78%)
Query: 499 LSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKA 558
+++ LANA P++ + +LGE LYP++E++ A K+TGMLLE++ +E+LH+LE EALKA
Sbjct: 567 IASLLANAKPQEAKQILGERLYPMIERMHAALAGKITGMLLEIENSELLHMLEDQEALKA 626
Query: 559 KVAEAMEVLR 568
KV EA+ VL+
Sbjct: 627 KVEEAVAVLQ 636
>gi|50293737|ref|XP_449280.1| hypothetical protein [Candida glabrata CBS 138]
gi|74690665|sp|Q6FKG4.1|PABP_CANGA RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|49528593|emb|CAG62254.1| unnamed protein product [Candida glabrata]
Length = 579
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 257/554 (46%), Positives = 345/554 (62%), Gaps = 35/554 (6%)
Query: 28 LTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARA 87
++ SLYVGDLD +V+++ LYD+FS +G V S+RVCRD T+ SLGY YVN+ + A A
Sbjct: 33 VSASLYVGDLDPSVSEAHLYDIFSPIGAVSSIRVCRDAITKTSLGYAYVNFNDHDAAKTA 92
Query: 88 LDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSC 147
++ LNFTP+ K RIM+S RDPS+RK G GNIFIKNL ID+KAL+DTFS FGNILS
Sbjct: 93 IEKLNFTPIKGKLCRIMWSQRDPSLRKKGAGNIFIKNLHPDIDNKALYDTFSVFGNILSS 152
Query: 148 KIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIK 205
K+ATD +G+SKGFG+V FE ESA AID LNGML+N ++++VG L K+ERE+ +K
Sbjct: 153 KVATDETGKSKGFGYVHFEEDESASEAIDALNGMLLNGQEIYVGPHLSKKERESKFEEMK 212
Query: 206 TKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKA 265
F NV++KN++ TTD++ +++ ++G S V+ R +G++K FGFVNF N +DA K
Sbjct: 213 ANFTNVYIKNINTETTDKEFEELVAKFGKTDSVVLERTPEGENKGFGFVNFVNHEDAVKC 272
Query: 266 VEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDD 325
VE LN +F + YV +AQKK ER+QELK Q+E E + K+QG+NL+IKNL DSIDD
Sbjct: 273 VEELNNTEFKGQPLYVNRAQKKYERQQELKKQYEATRMEKMAKYQGINLFIKNLDDSIDD 332
Query: 326 EKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVA 385
+KL+E F+ +GTITS KVM +G SKG GFV FSTPEEA++A+ E N +++ KPLYVA
Sbjct: 333 KKLEEEFAPYGTITSAKVMTTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVA 392
Query: 386 VAQRKEERRARLQAQF---SQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAIIP 442
+AQRK+ RR++L Q +QMR + PG QF+ P +
Sbjct: 393 IAQRKDVRRSQLAQQIQARNQMRFQQASAAAAAAAAAGMPG------QFM-----PPMFY 441
Query: 443 PQMPPRGHAYRYPLGR--NMQDFPFDMGAGSMLPVPVDMGA--GIPRRDASVGQPMPITA 498
MPPRG + P + NM P M P G G+P P A
Sbjct: 442 GVMPPRGVPFNGPNPQMANMGAMP----KNGMPPHQFRNGPVYGVP--------PQGGFA 489
Query: 499 LSTALANASPEQ-QRTLLGESLYPLVEQLERD--AAAKVTGMLLEMDQTEVLHLLESPEA 555
+ AN +Q QR LGE LY + D AA K+TGM+L++ EV+ LLE+ E
Sbjct: 490 RNGPAANQFYQQKQRQALGEELYKRIFSRTNDEEAAGKITGMILDLPPQEVVPLLENDEL 549
Query: 556 LKAKVAEAMEVLRS 569
+ EA S
Sbjct: 550 FEQHFKEASAAYES 563
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 5/103 (4%)
Query: 295 KGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP-SGISKG 353
+G E+ ETV +LY+ +L S+ + L ++FS G ++S +V RD + S G
Sbjct: 22 EGTNEENQSETV----SASLYVGDLDPSVSEAHLYDIFSPIGAVSSIRVCRDAITKTSLG 77
Query: 354 SGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRAR 396
+V F+ + A A+ ++N I K + +QR R +
Sbjct: 78 YAYVNFNDHDAAKTAIEKLNFTPIKGKLCRIMWSQRDPSLRKK 120
>gi|358334962|dbj|GAA31742.2| polyadenylate-binding protein, partial [Clonorchis sinensis]
Length = 738
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 228/468 (48%), Positives = 306/468 (65%), Gaps = 19/468 (4%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
TSLYVGDL T++ LY FS++G VLS R+CRDL+TR SLGYGYVN+ P DA RAL+
Sbjct: 1 TSLYVGDLHPLATEALLYSKFSEIGTVLSARICRDLATRNSLGYGYVNFEEPKDAERALE 60
Query: 90 VLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKI 149
LN+ + IRIM+S RDPS+RKSG GNIFIKNLDK+ID K L+DTFS G ILSCKI
Sbjct: 61 NLNYESFMGRPIRIMWSQRDPSLRKSGKGNIFIKNLDKTIDQKQLYDTFSFIGKILSCKI 120
Query: 150 ATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFN 209
A D G SKG+GFV FE +E A+ AI+K+NGM+IND+ V+VG F+ +R++ + K +FN
Sbjct: 121 AMDEHGNSKGYGFVHFEKEECAERAIEKINGMMINDRVVYVGKFIPSSDRKSASGKLRFN 180
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEAL 269
N++VKN TTDE L+ +F E+G I S V ++ +GKSK FGFV F + D A +AV +
Sbjct: 181 NIYVKNFPPDTTDEKLRDMFSEFGEIKSCCVEKNPEGKSKGFGFVCFHDPDHAEQAVRVM 240
Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKF-QGLNLYIKNLGDSIDDEKL 328
+GK+ + R Y +AQ+K ER++ELK + E+ E + K+ G+NLY+KNL D+IDDE+L
Sbjct: 241 HGKEINGRALYASRAQRKEERQEELKQRLEKQRAERLSKYVPGVNLYVKNLDDNIDDERL 300
Query: 329 KELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
KE FS +G ITS KVM D +G SKG GFV F+ PE+A+RA+ EMN ++ SKPLYVA+AQ
Sbjct: 301 KEAFSHYGPITSAKVMTDANGRSKGFGFVCFTQPEQAARAVTEMNATLVGSKPLYVALAQ 360
Query: 389 RKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPPQMPPR 448
RKE+RRA+L A+ Q R+ Y + + A P+ PP P+
Sbjct: 361 RKEDRRAKLIAEHQQ------------RLAQYRSPVTQMLPAAAAHAAAPSYFPPTAFPQ 408
Query: 449 GHAYRYPLGRNMQDFP-FDMGAGSMLPVPVDMGAGIPRRDASVGQPMP 495
Y +P + P ++ A +P +G G+ R PMP
Sbjct: 409 AQRYYHPTSAVISSQPRWNRAAAMSGGMPAQLGGGVSARP-----PMP 451
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 64/105 (60%), Gaps = 2/105 (1%)
Query: 465 FDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVE 524
F+ A ++ P +P A +G P+T +ALA S E Q+ LGE L+PLV+
Sbjct: 577 FNQTARNVSTQPTTAPGNMPSVLAPLGDQSPLTI--SALAQLSEEDQKRTLGERLFPLVQ 634
Query: 525 QLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRS 569
++ A K+TGMLL +D EV+HLLES E+L+AK+ E + VL++
Sbjct: 635 EMYPTLAQKLTGMLLGVDNAEVIHLLESKESLRAKLEEGISVLKT 679
>gi|363894957|gb|AEW42987.1| putative polyadenylate-binding protein 1, partial [Haliotis
diversicolor]
Length = 563
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 217/386 (56%), Positives = 297/386 (76%), Gaps = 9/386 (2%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
+G + SLYVGDL +VT++ L++ FS G VLS+RVCRD+ TRRSLGY YVN+ PA
Sbjct: 4 AGPSYPMASLYVGDLHPDVTEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPA 63
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
DA RALD +NF + + IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+FG
Sbjct: 64 DAERALDTMNFDTIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 202
NILSCKIA+D +G SKG+GFV FE +E+A+ AI+K+NGML+N K+V+VG F+ ++ER +
Sbjct: 124 NILSCKIASDENG-SKGYGFVHFETEEAARQAIEKVNGMLLNGKKVYVGKFIPRKER--I 180
Query: 203 AI----KTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFEN 258
A+ +FNNV++KN + D+ ++++F +G I SA VM D GKS+ FGFV++E
Sbjct: 181 ALLGDKMKRFNNVYIKNFGDELDDDKIRELFDPFGKIISAKVMTDEIGKSRGFGFVSYEE 240
Query: 259 ADDAAKAVEALNGKKF-DDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIK 317
+ A KAV+ LNG + + Y G+AQKK+ER+ ELK +FE+ E ++++QG+NLY+K
Sbjct: 241 PEAAEKAVDNLNGMELGGGKVLYAGRAQKKAERQAELKDKFEKIKMERINRYQGVNLYVK 300
Query: 318 NLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMI 377
NL D +DDE+L++ FS+FGTITS +VM + G SKG GFV FS+PEEA++A+ EMNG++I
Sbjct: 301 NLDDVVDDERLRKEFSQFGTITSARVMSE-GGRSKGFGFVCFSSPEEATKAVTEMNGRII 359
Query: 378 VSKPLYVAVAQRKEERRARLQAQFSQ 403
VSKPLYVA+AQRKE+RRA L +Q+ Q
Sbjct: 360 VSKPLYVALAQRKEDRRAHLASQYMQ 385
>gi|195150897|ref|XP_002016387.1| GL11548 [Drosophila persimilis]
gi|194110234|gb|EDW32277.1| GL11548 [Drosophila persimilis]
Length = 640
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 230/430 (53%), Positives = 297/430 (69%), Gaps = 13/430 (3%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL ++ ++ L++ FS G VLS+RVCRD+ TRRSLGY YVN+ PADA RALD
Sbjct: 3 SLYVGDLHQDINEAGLFEKFSTAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALDT 62
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF + NK IRIM+S RDPS+R+SG GN+FIKNLDK ID+KA++DTFS+FGNILSCK+A
Sbjct: 63 MNFDLIRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDKGIDNKAIYDTFSAFGNILSCKVA 122
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET-VAIKTK-F 208
D G SKG+GFV FE +E+A +ID++NGML+N K+V+VG F+ ++ERE + K K F
Sbjct: 123 IDEKGNSKGYGFVHFETEEAANTSIDRVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLF 182
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NV+VKN E DE LK+ F YG ITS VM DGKSK FGFV +E + A AV+A
Sbjct: 183 TNVYVKNFTEDFDDEKLKEFFEPYGKITSYKVMSKEDGKSKGFGFVAYETTEAAEAAVQA 242
Query: 269 LNGKKF-DDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEK 327
LNGK + + YV +AQKK+ER+QELK +FE+ K+ D G+NLY+KNL D+IDDE+
Sbjct: 243 LNGKDMGESKSLYVARAQKKAERQQELKRKFEELKKKRHDSVFGVNLYVKNLDDTIDDER 302
Query: 328 LKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 387
L++ FS +GTITS KVM D G SKG GFV F +P EA+ A+ E+NG++I SKPLYVA+A
Sbjct: 303 LRKDFSMYGTITSAKVMTDEEGRSKGFGFVCFISPNEATCAVTELNGRVIGSKPLYVALA 362
Query: 388 QRKEERRARLQAQF----SQMRPVAMGPSVPPR------MPMYPPGPSGLGQQFLYGQAP 437
QRKEER+A L +Q+ + MR +G P +P PP G Q
Sbjct: 363 QRKEERKAHLASQYMRHMTGMRMQQLGQMFQPNTTGGFFVPTIPPSQRFFGPQMTTQMRN 422
Query: 438 PAIIPPQMPP 447
PQ+ P
Sbjct: 423 APRWAPQVRP 432
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 57/70 (81%)
Query: 499 LSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKA 558
+++ LANA+P++Q+ +LGE LYP++E++ A K+TGMLLE++ +E+LH+LE EALKA
Sbjct: 562 IASLLANANPQEQKQILGERLYPMIERMHAALAGKITGMLLEIENSELLHMLEDKEALKA 621
Query: 559 KVAEAMEVLR 568
KV EA+ VL+
Sbjct: 622 KVEEAVAVLQ 631
>gi|385305672|gb|EIF49630.1| polyadenylate-binding protein [Dekkera bruxellensis AWRI1499]
Length = 655
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 252/593 (42%), Positives = 358/593 (60%), Gaps = 48/593 (8%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
N+ SLYVGDLD +VT+S LY++FS+VGQV S+RVCRB T++SL Y YVNY +A
Sbjct: 55 NEQTFASLYVGDLDPSVTESDLYEIFSKVGQVSSIRVCRBAVTKKSLCYAYVNYQKREEA 114
Query: 85 ARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNI 144
ALD L F + K RIM+S RDPS+RK GTGN+FIKNL ID+K L+DTFS+FG I
Sbjct: 115 EHALDTLAFCDIKGKQCRIMWSQRDPSMRKKGTGNVFIKNLHPDIDNKTLYDTFSTFGKI 174
Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV-- 202
LSCKIATD G SKGFGFV +++ ESA+ AI+ +NGML+N+ +V+V + +++RE+
Sbjct: 175 LSCKIATDEHGHSKGFGFVHYDDAESAKAAIENVNGMLLNNMEVYVAPHIPRKDRESKMQ 234
Query: 203 AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDA 262
+ F NV+VKN T++ L+++F YG +TS + D +GK++ FGFVNFE+ +A
Sbjct: 235 EMIKNFTNVYVKNFGPEMTEDQLREMFEAYGKVTSTYLPTDNEGKARGFGFVNFEDHXEA 294
Query: 263 AKAVEALNGKKFD-DREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGD 321
AKAV+ALN K+ + R YVG+AQKK ERE+ L+ Q++QA +E + K+QG+NL++KNL D
Sbjct: 295 AKAVDALNEKELEGGRILYVGRAQKKREREESLRKQWQQARQERISKYQGVNLFVKNLDD 354
Query: 322 SIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKP 381
+IDD KLKE F+ +G ITS KVM + +G S+G GFV ++ PEEA+RA+ EM+ +M++ KP
Sbjct: 355 TIDDTKLKEEFAPYGKITSAKVMTNDAGKSRGFGFVCYTKPEEATRAINEMHQRMVMGKP 414
Query: 382 LYVAVAQRKEERRARLQAQFSQMRPV---------AMGPSVPP-----RMPMYPPGPSGL 427
LYVA+AQRKE R +L QF Q + MG V P PP P+G+
Sbjct: 415 LYVALAQRKEVRHNQLSQQFQQRNQMRLQQAAVQGGMGQFVAPMFYGQNAGFIPPMPAGV 474
Query: 428 GQQFLYGQAPPAIIPPQMPPR-GHAY-----RYPLGRNMQDFPFDM-----------GAG 470
G P ++ Q R G ++ +G N Q P M
Sbjct: 475 RGAPFAGNGAPQMMMQQGASRPGQGVPVSPGQFRVGPNGQPVPMYMQPMFNEYQQQQQQQ 534
Query: 471 SMLPVPVDMG---AGIPRRDASVG--QPMPITALSTA-----LANASPEQQRTLLGESLY 520
+ G AG ++ G Q TA+++A L +PEQQ+ LGE LY
Sbjct: 535 QRYYQRQNHGNAPAGAEKKGDKPGEEQEAAATAVNSASLADFLPKLAPEQQKRALGEELY 594
Query: 521 PLVEQL----ERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRS 569
+E +++A K+TGM+L MD ++L +L+ + +A+ S
Sbjct: 595 AKIEATGKASDKEAVGKITGMMLSMDNKQILDMLKDDALFNTQFQQALSAYES 647
>gi|289742137|gb|ADD19816.1| polyA-binding protein [Glossina morsitans morsitans]
Length = 653
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 237/418 (56%), Positives = 303/418 (72%), Gaps = 8/418 (1%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL ++ ++ L++ FS G VLS+RVCRD+ TRRSLGY YVN+ PADA RALD
Sbjct: 3 SLYVGDLHQDINEAGLFEKFSNAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALDT 62
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF L NK IRIM+S RDPS+R+SG GN+FIKNLDK+ID+KA++DTFS+FGNILSCK+A
Sbjct: 63 MNFDLLRNKPIRIMWSQRDPSLRRSGIGNVFIKNLDKTIDNKAIYDTFSAFGNILSCKVA 122
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET-VAIKTK-F 208
TD G SKG+GFV FE +E+A NAI+K+NGML+N K+V+VG F+ ++ERE + K K F
Sbjct: 123 TDDKGTSKGYGFVHFETEEAANNAIEKVNGMLLNGKKVYVGKFIPRKEREKDLGEKAKLF 182
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NV+VKN + DE LK++F YG ITS VM DGKSKCFGFV FE + A AVEA
Sbjct: 183 TNVYVKNFGDDVDDEKLKEMFDPYGKITSYKVMIKEDGKSKCFGFVAFETTEAAEAAVEA 242
Query: 269 LNGKKF-DDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEK 327
LNGK D + YV +AQKK+ER+QELK +FE+ K+ + G+NLY+KNL D+IDDE+
Sbjct: 243 LNGKDMGDGKALYVARAQKKAERQQELKRKFEELKKKRQESVYGVNLYVKNLDDTIDDER 302
Query: 328 LKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 387
L++ FS FGTITS KVM D G SKG GFV F P EA+ A+ EMNG+++ SKPLYVA+A
Sbjct: 303 LRKEFSLFGTITSAKVMTDEDGRSKGFGFVCFVAPHEATCAVTEMNGRVVGSKPLYVALA 362
Query: 388 QRKEERRARLQAQFSQ----MRPVAMGPSVPPRMPMYPPGPS-GLGQQFLYGQAPPAI 440
QRKE+R+A L +Q+ + MR +G P P P+ G GQ+F Q P A+
Sbjct: 363 QRKEDRKAHLASQYMRHMAGMRMQQIGQMFQPNTPGNFFVPTMGPGQRFFGPQVPTAM 420
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 57/76 (75%)
Query: 492 QPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLE 551
Q P L++ LANA+P++Q+ +LGE LYP++E + A K+TGMLLE++ +E+LH++E
Sbjct: 568 QKGPEKLLASMLANANPQEQKQILGERLYPIIELAHPNMAGKITGMLLEIENSELLHMIE 627
Query: 552 SPEALKAKVAEAMEVL 567
EALKAKV EA+ VL
Sbjct: 628 DQEALKAKVEEAVAVL 643
>gi|348502707|ref|XP_003438909.1| PREDICTED: embryonic polyadenylate-binding protein-like
[Oreochromis niloticus]
Length = 623
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 211/384 (54%), Positives = 289/384 (75%), Gaps = 4/384 (1%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
+SG + SLYVGDL +VT++ LY FS G ++S+RVCRD+ TRRSLGY YVN+ P
Sbjct: 3 SSGPAYPLASLYVGDLHPDVTEAMLYQKFSPAGPIMSIRVCRDIITRRSLGYAYVNFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA ALD +N+ + + IRIM+S RDP +RKSG GNIFIKN+D+SID+KAL+DTFS+F
Sbjct: 63 ADAECALDTMNYDVIKGRPIRIMWSQRDPGLRKSGVGNIFIKNMDESIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D G SKG+GFV FE +E+A AI+ +NGML+ND++VFVGHF ++ERE
Sbjct: 123 GNILSCKVVCDEKG-SKGYGFVHFETQEAANRAIETMNGMLLNDRKVFVGHFKSRKEREV 181
Query: 202 V--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ KF NV++KN E TDE LK++F +G S VM+D G+S+ FGFVN+ +
Sbjct: 182 EFGSKAMKFTNVYIKNFGEDFTDEKLKEVFSAFGRTLSVRVMKDEKGRSRGFGFVNYAHH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAV +NGK+ + + YVG+AQK+ ER+ ELK +F+Q ++ + ++QG+NLY+KNL
Sbjct: 242 EDAQKAVNEMNGKEINGKILYVGRAQKRLERQGELKRKFDQIKQDRIQRYQGVNLYVKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
DSIDDE+L++ F+ +GTITS KVM D S SKG GFV FS+PEEA++A+ EMNG+++ +
Sbjct: 302 DDSIDDERLRKEFAPYGTITSAKVMTDGSQ-SKGFGFVCFSSPEEATKAVTEMNGRIVAT 360
Query: 380 KPLYVAVAQRKEERRARLQAQFSQ 403
KPLYVA+AQR+EER+A L ++ Q
Sbjct: 361 KPLYVALAQRREERKAILTNKYMQ 384
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 104/289 (35%), Positives = 166/289 (57%), Gaps = 16/289 (5%)
Query: 118 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAID 176
++++ +L + L+ FS G I+S ++ D + +S G+ +V F+ A+ A+D
Sbjct: 11 ASLYVGDLHPDVTEAMLYQKFSPAGPIMSIRVCRDIITRRSLGYAYVNFQQPADAECALD 70
Query: 177 KLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTIT 236
+N +I + + + +R+ K+ N+F+KN+DES ++ L F +G I
Sbjct: 71 TMNYDVIKGRPIRI----MWSQRDPGLRKSGVGNIFIKNMDESIDNKALYDTFSAFGNIL 126
Query: 237 SAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKG 296
S V+ D G SK +GFV+FE + A +A+E +NG +DR+ +VG + + ERE E
Sbjct: 127 SCKVVCDEKG-SKGYGFVHFETQEAANRAIETMNGMLLNDRKVFVGHFKSRKEREVEFGS 185
Query: 297 QFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGF 356
+ AMK T N+YIKN G+ DEKLKE+FS FG S +VM+D G S+G GF
Sbjct: 186 K---AMKFT-------NVYIKNFGEDFTDEKLKEVFSAFGRTLSVRVMKDEKGRSRGFGF 235
Query: 357 VAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
V ++ E+A +A+ EMNGK I K LYV AQ++ ER+ L+ +F Q++
Sbjct: 236 VNYAHHEDAQKAVNEMNGKEINGKILYVGRAQKRLERQGELKRKFDQIK 284
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 102/291 (35%), Positives = 168/291 (57%), Gaps = 23/291 (7%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ ++D ++ + LYD FS G +LS +V D + S GYG+V++ A RA++
Sbjct: 100 NIFIKNMDESIDNKALYDTFSAFGNILSCKVVCD--EKGSKGYGFVHFETQEAANRAIET 157
Query: 91 LNFTPLNNKSIRIMY--SHRDPSIRKSGTG----NIFIKNLDKSIDHKALHDTFSSFGNI 144
+N LN++ + + + S ++ + N++IKN + + L + FS+FG
Sbjct: 158 MNGMLLNDRKVFVGHFKSRKEREVEFGSKAMKFTNVYIKNFGEDFTDEKLKEVFSAFGRT 217
Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAI 204
LS ++ D G+S+GFGFV + + E AQ A++++NG IN K ++VG ++ ER+ +
Sbjct: 218 LSVRVMKDEKGRSRGFGFVNYAHHEDAQKAVNEMNGKEINGKILYVGRAQKRLERQG-EL 276
Query: 205 KTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCF 251
K KF+ N++VKNLD+S DE L+K F YGTITSA VM DG +SK F
Sbjct: 277 KRKFDQIKQDRIQRYQGVNLYVKNLDDSIDDERLRKEFAPYGTITSAKVMTDG-SQSKGF 335
Query: 252 GFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAM 302
GFV F + ++A KAV +NG+ + YV AQ++ ER+ L ++ Q +
Sbjct: 336 GFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRREERKAILTNKYMQRL 386
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 493 PMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLES 552
P P+TA + LA A P Q+ LLGE LYPL+ L + A K+TGMLLE+D +E+LH+LES
Sbjct: 539 PEPLTA--SVLAAAPPMDQKQLLGERLYPLIHALHPNLAGKITGMLLEIDNSELLHMLES 596
Query: 553 PEALKAKVAEAMEVLRS 569
E+L AKV EA+ VL++
Sbjct: 597 QESLHAKVDEAIAVLQA 613
>gi|157817831|ref|NP_001099621.1| poly(A) binding protein, cytoplasmic 2 [Rattus norvegicus]
gi|149017412|gb|EDL76463.1| poly A binding protein, cytoplasmic 2 (predicted) [Rattus
norvegicus]
Length = 630
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 222/399 (55%), Positives = 296/399 (74%), Gaps = 7/399 (1%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL +VT++ LY+ FS G +LS+RV RD+ TRRSLGY VN+ PADA RALD
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSSAGPILSIRVYRDVITRRSLGYASVNFEQPADAERALDT 71
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF + K +RIM+S RDPS+R+SG GN+FIKNL+K+ID+KAL+DTFS+FGNILSCK+
Sbjct: 72 MNFDVIKGKPVRIMWSQRDPSLRRSGVGNVFIKNLNKTIDNKALYDTFSAFGNILSCKVV 131
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET-VAIKTK-F 208
D +G SKG GFV FE +E+A+ AI+K+NGML+ND++VFVG F ++ERE + +TK F
Sbjct: 132 CDENG-SKGHGFVHFETEEAAERAIEKMNGMLLNDRKVFVGQFKSRKEREAELGTRTKEF 190
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NV++KN + D+ L +FG +G + S VM D GKSK FGFV+FE +DA KAV+
Sbjct: 191 TNVYIKNFGDRMDDKTLNGLFGRFGQVLSVKVMTDEGGKSKGFGFVSFERHEDAQKAVDE 250
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
+NGK+ + + YVG AQKK +R ELK +FEQ ++ ++QG+NLY+KNL D IDDE+L
Sbjct: 251 MNGKELNGKHIYVGPAQKKVDRHIELKRKFEQVTQDRGIRYQGINLYVKNLDDGIDDERL 310
Query: 329 KELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
++ FS FGTITS KVM + G SKG GFV FS+PEEA++A++EMNG+++ +KPLYVA+AQ
Sbjct: 311 QKEFSPFGTITSTKVMTE-GGRSKGFGFVCFSSPEEATKAVSEMNGRIVATKPLYVALAQ 369
Query: 389 RKEERRARLQAQFSQ-MRPVAMGPSVPPRMPMYPPGPSG 426
RKEER+A L Q+ Q M V GP+ + Y P PSG
Sbjct: 370 RKEERQAHLTNQYIQRMASVRSGPN--SLINAYQPAPSG 406
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 103/188 (54%), Gaps = 20/188 (10%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
T++Y+ + + D L LF + GQVLSV+V D +S G+G+V++ DA +A+D
Sbjct: 191 TNVYIKNFGDRMDDKTLNGLFGRFGQVLSVKVMTD-EGGKSKGFGFVSFERHEDAQKAVD 249
Query: 90 VLNFTPLNNKSIRIMYSHR-----------------DPSIRKSGTGNIFIKNLDKSIDHK 132
+N LN K I + + + D IR G N+++KNLD ID +
Sbjct: 250 EMNGKELNGKHIYVGPAQKKVDRHIELKRKFEQVTQDRGIRYQGI-NLYVKNLDDGIDDE 308
Query: 133 ALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGH 192
L FS FG I S K+ T+G G+SKGFGFV F + E A A+ ++NG ++ K ++V
Sbjct: 309 RLQKEFSPFGTITSTKVMTEG-GRSKGFGFVCFSSPEEATKAVSEMNGRIVATKPLYVAL 367
Query: 193 FLRKQERE 200
RK+ER+
Sbjct: 368 AQRKEERQ 375
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 59/92 (64%), Gaps = 8/92 (8%)
Query: 492 QPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLE 551
+P + L TA P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E LH+L+
Sbjct: 538 EPWTASTLGTA-----PQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSEPLHMLD 592
Query: 552 SPEALKAKVAEAMEVLRSVAQQQANNPADQLA 583
SPE+L ++ EA+ L++ QAN A + A
Sbjct: 593 SPESLCSRAQEAVSALQA---HQANEAAQKAA 621
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 54/102 (52%), Gaps = 3/102 (2%)
Query: 24 GNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPAD 83
G ++ +LYV +LD + D +L FS G + S +V + RS G+G+V +++P +
Sbjct: 288 GIRYQGINLYVKNLDDGIDDERLQKEFSPFGTITSTKVMTEGG--RSKGFGFVCFSSPEE 345
Query: 84 AARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNL 125
A +A+ +N + K + + + R R++ N +I+ +
Sbjct: 346 ATKAVSEMNGRIVATKPLYVALAQRKEE-RQAHLTNQYIQRM 386
>gi|82802761|gb|ABB92431.1| PABP3 [Aotus trivirgatus]
Length = 629
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 215/379 (56%), Positives = 285/379 (75%), Gaps = 4/379 (1%)
Query: 27 FLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAAR 86
+ T SLYVGDL +VT++ LY+ FS G +LS+RVCRDL TRRS Y YVN+ +P DA
Sbjct: 8 YPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRRSSNYAYVNFQHPKDAEH 67
Query: 87 ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
ALD +NF + K +RIM+S DPS+RKSG GNIF+KNLDKSI++KAL+DT S+FGNILS
Sbjct: 68 ALDTMNFDVIKGKPVRIMWSQHDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILS 127
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET-VAIK 205
CK+ D +G SKG+GFV FE E+A+ AI+K+NGML+ND++VFVG F ++ERE + K
Sbjct: 128 CKVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAK 186
Query: 206 TK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAK 264
K F NV++KN E DE LK +FG++G S VM D GKSK FGFV+FE +DA K
Sbjct: 187 AKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFEKHEDAQK 246
Query: 265 AVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSID 324
AV+ +NGK+ ++ YVG+AQKK ER+ ELK +FEQ ++ + ++Q +NLY+KNL D ID
Sbjct: 247 AVDEMNGKELSGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQVVNLYVKNLDDGID 306
Query: 325 DEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYV 384
DE+L++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +KPLYV
Sbjct: 307 DERLRKAFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Query: 385 AVAQRKEERRARLQAQFSQ 403
A+AQRKEER+A L ++ Q
Sbjct: 366 ALAQRKEERQAYLTNEYMQ 384
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 113/291 (38%), Positives = 169/291 (58%), Gaps = 23/291 (7%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
+++V +LD ++ + LYD S G +LS +V D + S GYG+V++ A RA++
Sbjct: 100 NIFVKNLDKSINNKALYDTVSAFGNILSCKVVCDENG--SKGYGFVHFETHEAAERAIEK 157
Query: 91 LNFTPLNNKSIRI-MYSHRDPSIRKSGTG-----NIFIKNLDKSIDHKALHDTFSSFGNI 144
+N LN++ + + + R + G N++IKN + +D + L D F FG
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFPNVYIKNFGEDMDDERLKDLFGKFGPA 217
Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAI 204
LS K+ TD SG+SKGFGFV FE E AQ A+D++NG ++ KQ++VG +K ER+T +
Sbjct: 218 LSVKVMTDESGKSKGFGFVSFEKHEDAQKAVDEMNGKELSGKQIYVGRAQKKVERQT-EL 276
Query: 205 KTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCF 251
K KF N++VKNLD+ DE L+K F +GTITSA VM +G G+SK F
Sbjct: 277 KRKFEQMKQDRITRYQVVNLYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEG-GRSKGF 335
Query: 252 GFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAM 302
GFV F + ++A KAV +NG+ + YV AQ+K ER+ L ++ Q M
Sbjct: 336 GFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAYLTNEYMQRM 386
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 109/298 (36%), Positives = 176/298 (59%), Gaps = 16/298 (5%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATD-GSGQSKGFGFVQFEN 167
+PS T ++++ +L + L++ FS G ILS ++ D + +S + +V F++
Sbjct: 2 NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRRSSNYAYVNFQH 61
Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
+ A++A+D +N +I K V + + Q ++ K+ N+FVKNLD+S ++ L
Sbjct: 62 PKDAEHALDTMNFDVIKGKPVRI---MWSQHDPSLR-KSGVGNIFVKNLDKSINNKALYD 117
Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
+G I S V+ D +G SK +GFV+FE + A +A+E +NG +DR+ +VG+ + +
Sbjct: 118 TVSAFGNILSCKVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
ERE EL + ++ N+YIKN G+ +DDE+LK+LF +FG S KVM D
Sbjct: 177 KEREAELGAKAKEF----------PNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE 226
Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
SG SKG GFV+F E+A +A+ EMNGK + K +YV AQ+K ER+ L+ +F QM+
Sbjct: 227 SGKSKGFGFVSFEKHEDAQKAVDEMNGKELSGKQIYVGRAQKKVERQTELKRKFEQMK 284
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 61/83 (73%)
Query: 497 TALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEAL 556
T ++ LA+A P++Q+ +LGE L+PL+E + A K+TGMLLE+D +E+LH+LESPE+L
Sbjct: 538 TLTASMLASAPPQKQKQMLGERLFPLIEAMRPTLAGKITGMLLEIDNSELLHMLESPESL 597
Query: 557 KAKVAEAMEVLRSVAQQQANNPA 579
+KV EA+ VL++ ++A A
Sbjct: 598 GSKVDEAVAVLQAHQAKEATQKA 620
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
++ +LYV +LD + D +L FS G + S +V + RS G+G+V +++P +A
Sbjct: 289 TRYQVVNLYVKNLDDGIDDERLRKAFSPFGTITSAKVM--MEGGRSKGFGFVCFSSPEEA 346
Query: 85 ARALDVLNFTPLNNKSIRIMYSHR 108
+A+ +N + K + + + R
Sbjct: 347 TKAVTEMNGRIVATKPLYVALAQR 370
>gi|355745175|gb|EHH49800.1| hypothetical protein EGM_00521 [Macaca fascicularis]
Length = 635
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 226/401 (56%), Positives = 290/401 (72%), Gaps = 26/401 (6%)
Query: 46 LYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMY 105
LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ PADA RALD +NF + K IRIM+
Sbjct: 2 LYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMW 61
Query: 106 SHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQF 165
S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+FGNILSCK+ D +G SKG+ FV F
Sbjct: 62 SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHF 120
Query: 166 ENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET-VAIKTK-FNNVFVKNLDESTTDE 223
E +E+A AI+K+NGML+ND++VFVG F ++ERE + K K F NV++KN E DE
Sbjct: 121 ETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDE 180
Query: 224 DLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGK 283
LK++F ++G S VMRD GKSK FGFV++E +DA KAVE +NGK+ + +VG+
Sbjct: 181 SLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGR 240
Query: 284 AQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKV 343
AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL D+IDDEKL++ FS FG+ITS KV
Sbjct: 241 AQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKV 300
Query: 344 MRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQF-- 401
M + G SKG GFV FS+PEEA++A+ EMNG+++ SKPLYVA+AQRKEER+A L Q+
Sbjct: 301 MLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAHLTNQYMQ 359
Query: 402 --------------SQMRPVAMG---PSVPP---RMPMYPP 422
+Q +P A G P+VP R P Y P
Sbjct: 360 RVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRPPYYTP 400
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 105/289 (36%), Positives = 167/289 (57%), Gaps = 23/289 (7%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ +LD ++ + LYD FS G +LS +V D + S GY +V++ A +A++
Sbjct: 75 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYAFVHFETQEAADKAIEK 132
Query: 91 LNFTPLNNKSIRI-MYSHRDPSIRKSGT-----GNIFIKNLDKSIDHKALHDTFSSFGNI 144
+N LN++ + + + R + G N++IKN + +D ++L + FS FG
Sbjct: 133 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKT 192
Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAI 204
LS K+ D SG+SKGFGFV +E E A A++++NG I+ K +FVG +K ER+ +
Sbjct: 193 LSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQ-AEL 251
Query: 205 KTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCF 251
K KF N+++KNLD++ DE L+K F +G+ITSA VM + DG+SK F
Sbjct: 252 KRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGF 310
Query: 252 GFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQ 300
GFV F + ++A KAV +NG+ + YV AQ+K ER+ L Q+ Q
Sbjct: 311 GFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAHLTNQYMQ 359
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 107/196 (54%), Gaps = 20/196 (10%)
Query: 21 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYAN 80
GA +F T++Y+ + V D L +LFSQ G+ LSV+V RD S +S G+G+V+Y
Sbjct: 159 GAKAKEF--TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSG-KSKGFGFVSYEK 215
Query: 81 PADAARALDVLNFTPLNNKSI----------------RIMYSHRDPSIRKSGTGNIFIKN 124
DA +A++ +N ++ K I R + I + N++IKN
Sbjct: 216 HEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN 275
Query: 125 LDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLIN 184
LD +ID + L FS FG+I S K+ + G+SKGFGFV F + E A A+ ++NG ++
Sbjct: 276 LDDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVG 334
Query: 185 DKQVFVGHFLRKQERE 200
K ++V RK+ER+
Sbjct: 335 SKPLYVALAQRKEERK 350
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 60/75 (80%), Gaps = 2/75 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A P++Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 544 PLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPE 601
Query: 555 ALKAKVAEAMEVLRS 569
+L++KV EA+ VL++
Sbjct: 602 SLRSKVDEAVAVLQA 616
>gi|125808454|ref|XP_001360757.1| GA18673 [Drosophila pseudoobscura pseudoobscura]
gi|54635929|gb|EAL25332.1| GA18673 [Drosophila pseudoobscura pseudoobscura]
Length = 640
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 230/430 (53%), Positives = 297/430 (69%), Gaps = 13/430 (3%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL ++ ++ L++ FS G VLS+RVCRD+ TRRSLGY YVN+ PADA RALD
Sbjct: 3 SLYVGDLHQDINEAGLFEKFSTAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALDT 62
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF + NK IRIM+S RDPS+R+SG GN+FIKNLDK ID+KA++DTFS+FGNILSCK+A
Sbjct: 63 MNFDLIRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDKGIDNKAIYDTFSAFGNILSCKVA 122
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET-VAIKTK-F 208
D G SKG+GFV FE +E+A +ID++NGML+N K+V+VG F+ ++ERE + K K F
Sbjct: 123 IDEKGNSKGYGFVHFETEEAANMSIDRVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLF 182
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NV+VKN E DE LK+ F YG ITS VM DGKSK FGFV +E + A AV+A
Sbjct: 183 TNVYVKNFTEDFDDEKLKEFFEPYGKITSYKVMSKEDGKSKGFGFVAYETTEAAEAAVQA 242
Query: 269 LNGKKF-DDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEK 327
LNGK + + YV +AQKK+ER+QELK +FE+ K+ D G+NLY+KNL D+IDDE+
Sbjct: 243 LNGKDMGESKSLYVARAQKKAERQQELKRKFEELKKKRHDSVFGVNLYVKNLDDTIDDER 302
Query: 328 LKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 387
L++ FS +GTITS KVM D G SKG GFV F +P EA+ A+ E+NG++I SKPLYVA+A
Sbjct: 303 LRKDFSMYGTITSAKVMTDEEGRSKGFGFVCFISPNEATCAVTELNGRVIGSKPLYVALA 362
Query: 388 QRKEERRARLQAQF----SQMRPVAMGPSVPPR------MPMYPPGPSGLGQQFLYGQAP 437
QRKEER+A L +Q+ + MR +G P +P PP G Q
Sbjct: 363 QRKEERKAHLASQYMRHMTGMRMQQLGQMFQPNTTGGFFVPTIPPSQRFFGPQMTTQMRN 422
Query: 438 PAIIPPQMPP 447
PQ+ P
Sbjct: 423 APRWAPQVRP 432
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 57/70 (81%)
Query: 499 LSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKA 558
+++ LANA+P++Q+ +LGE LYP++E++ A K+TGMLLE++ +E+LH+LE EALKA
Sbjct: 562 IASLLANANPQEQKQILGERLYPMIERMHAALAGKITGMLLEIENSELLHMLEDKEALKA 621
Query: 559 KVAEAMEVLR 568
KV EA+ VL+
Sbjct: 622 KVEEAVAVLQ 631
>gi|448519634|ref|XP_003868121.1| poly(A)-binding protein [Candida orthopsilosis Co 90-125]
gi|380352460|emb|CCG22686.1| poly(A)-binding protein [Candida orthopsilosis]
Length = 638
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 252/558 (45%), Positives = 353/558 (63%), Gaps = 56/558 (10%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVG+L+ +V ++ L+++FS +GQV S+RVCRD +++SLGY YVNY D +A+
Sbjct: 60 SASLYVGELNPSVNEATLFEIFSPIGQVSSIRVCRDAVSKKSLGYAYVNYHKFEDGEKAI 119
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
D LN++ + N+ RIM+S RDPS R+SG GNIFIKNL +ID+KALHDTFS+FG ILSCK
Sbjct: 120 DELNYSLIENRPCRIMWSQRDPSARRSGDGNIFIKNLHPAIDNKALHDTFSAFGRILSCK 179
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKT 206
+ATD GQSK FGFV +E E+A+ AI+ +NGML+ND++V+VG + K++RE+ +K
Sbjct: 180 VATDDLGQSKCFGFVHYETAEAAEAAIENVNGMLLNDREVYVGKHVSKKDRESKFEEMKA 239
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
+ N++VKN+D ++++ + +F YG ITS + +D DGKSK FGFVN+E A +AV
Sbjct: 240 NYTNIYVKNIDLEFSEKEFEDLFAPYGKITSIYLEKDQDGKSKGFGFVNYEEHKSAVEAV 299
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
EALN K+ + ++ YVG+AQKK ER +ELK Q+E E + K+QG+NL++KNL D ID E
Sbjct: 300 EALNDKEINGQKIYVGRAQKKRERTEELKKQYEAIRLEKLSKYQGVNLFVKNLDDQIDSE 359
Query: 327 KLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 386
KL+E F FGTITS KVM D +G S+G GFV FSTPEEA++A+ EMN +M+ KPLYVA+
Sbjct: 360 KLEEEFKPFGTITSAKVMVDDAGKSRGFGFVCFSTPEEATKAITEMNQRMVNGKPLYVAL 419
Query: 387 AQRKEERRARLQAQFS-----QMRPVAMGPSVPPRM--PMYPPGPSGLGQQFLY-----G 434
AQRK+ RR++L+ Q +M+ A P + PMY GQQ + G
Sbjct: 420 AQRKDVRRSQLEQQIQARNQMRMQNAAAAAGFPGQFMPPMY------YGQQGFFPPGGRG 473
Query: 435 QAPPAIIPPQMPPRGHAYRYPLGRNMQDFPFDM---GAGSMLPVPVDMGAGIPRR----- 486
AP PQM R G+ Q FP G + PVPV GIP +
Sbjct: 474 NAPFPGPNPQMMMR-------RGQPGQPFPEQWPRPGGPNGQPVPV---YGIPPQFPDQR 523
Query: 487 --------------DASVGQPMPITALSTALANASPEQQRTLLGESLYPLV----EQLER 528
G +P L+ +++ PEQQ+ +LGE LYP + + E
Sbjct: 524 AQQQQQQQQQRGYYPGQAGVKVPAKDLAAIISSVPPEQQKRILGEELYPRIVATGKAQEP 583
Query: 529 DAAAKVTGMLLEMDQTEV 546
+AA K+TGM+L ++ E+
Sbjct: 584 EAAGKITGMMLGLENQEI 601
>gi|403417917|emb|CCM04617.1| predicted protein [Fibroporia radiculosa]
Length = 671
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 209/382 (54%), Positives = 295/382 (77%), Gaps = 2/382 (0%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
SLYVG+LD VT++ L+++F+ +G V S+RVCRD TRRSLGY YVNY N AD RAL+
Sbjct: 44 ASLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALE 103
Query: 90 VLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKI 149
LN++ + ++ RIM+S RDP++RK+G GNIFIKNLD+ ID+KALHDTF++FGN+LSCK+
Sbjct: 104 QLNYSSIKGRACRIMWSQRDPALRKTGQGNIFIKNLDEQIDNKALHDTFAAFGNVLSCKV 163
Query: 150 ATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTK 207
ATD G+SKG+GFV +E E+A+ AI +NGML+NDK+V+VG+ + ++ER++ +K +
Sbjct: 164 ATDEHGRSKGYGFVHYETAEAAETAIKAVNGMLLNDKKVYVGYHISRKERQSKLEEMKAQ 223
Query: 208 FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVE 267
F N++VKN D T+E+ +F ++G++TSAV+ RD +G+S+ FGFVNFE D+A KAVE
Sbjct: 224 FTNIYVKNFDPEVTEEEFMALFQQFGSVTSAVIQRDDEGRSRGFGFVNFEVHDEAQKAVE 283
Query: 268 ALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEK 327
L+ F ++ +V +AQKK+EREQEL+ +EQA E + KFQG+NLYIKNL D +DD++
Sbjct: 284 GLHDLDFKGKKLFVSRAQKKAEREQELRQSYEQAKMEKMSKFQGVNLYIKNLEDDLDDDR 343
Query: 328 LKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 387
L+ F FG+ITS KVMRD G SKG GFV FS+P+EA++A+AEMN KMI +KPLYV++A
Sbjct: 344 LRTEFEPFGSITSAKVMRDEKGTSKGFGFVCFSSPDEATKAVAEMNNKMIGTKPLYVSLA 403
Query: 388 QRKEERRARLQAQFSQMRPVAM 409
QR++ RR +L++Q +Q + M
Sbjct: 404 QRRDVRRQQLESQIAQRNQIRM 425
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 73/138 (52%), Gaps = 17/138 (12%)
Query: 438 PAIIPPQMPPRGHAYRY-PLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPI 496
PA P R Y+ P RN AG+ VP GA +P +A P
Sbjct: 545 PAAGTPAAASRPQGYKLNPQTRN---------AGAAGQVPSPGGAPVPGAEA----PGIS 591
Query: 497 TALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEAL 556
+AL LANASP +Q+ +LGE +Y + D A K+TGMLLEMD E+LHLL+ E++
Sbjct: 592 SAL---LANASPMEQKQMLGEVIYMKIAPAHPDLAGKITGMLLEMDNAELLHLLDDQESM 648
Query: 557 KAKVAEAMEVLRSVAQQQ 574
KV EA+ VL +Q++
Sbjct: 649 NNKVNEALVVLHEFSQKE 666
>gi|402901594|ref|XP_003913731.1| PREDICTED: polyadenylate-binding protein 1-like [Papio anubis]
Length = 636
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 217/402 (53%), Positives = 292/402 (72%), Gaps = 4/402 (0%)
Query: 27 FLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAAR 86
+ T SLYVGDL +VT++ LY+ FS+ G +LS+RVCRD+ TRRS Y YVN+ +P DA
Sbjct: 8 YPTASLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRSSSYAYVNFQHPKDAEH 67
Query: 87 ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
ALD +NF + K +RIM+S RDPS+R+SG GNIF+KNLDKSI++K L+DT S+FGNILS
Sbjct: 68 ALDTMNFDVIKGKPVRIMWSQRDPSLRRSGVGNIFVKNLDKSINNKVLYDTVSAFGNILS 127
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET-VAIK 205
CK+ D +G SKG+GFV FE E+A+ AI+K+NG L+ND++VFVG F ++ERE + K
Sbjct: 128 CKVVCDENG-SKGYGFVHFETHEAAERAIEKMNGTLLNDRKVFVGRFKSRKEREAELGAK 186
Query: 206 TK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAK 264
K F NV++KN E DE LK +FG++G S VM D GKSK FGFV+FE +DA K
Sbjct: 187 VKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQK 246
Query: 265 AVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSID 324
AV+ +NGK+ + ++ YVG+AQKK ER+ ELK +FEQ ++ + ++Q +NLY+KNL D ID
Sbjct: 247 AVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQVVNLYVKNLDDDID 306
Query: 325 DEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYV 384
DE+L++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +KPLYV
Sbjct: 307 DERLRKAFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Query: 385 AVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSG 426
A+AQRKE+R+A L ++ Q P P P PSG
Sbjct: 366 ALAQRKEDRQAHLTNEYMQRMASVRAVPNPVINPYQPAPPSG 407
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 110/298 (36%), Positives = 176/298 (59%), Gaps = 16/298 (5%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFEN 167
+PS T ++++ +L + L++ FS G ILS ++ D + +S + +V F++
Sbjct: 2 NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRSSSYAYVNFQH 61
Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
+ A++A+D +N +I K V + +R+ ++ N+FVKNLD+S ++ L
Sbjct: 62 PKDAEHALDTMNFDVIKGKPVRIMW----SQRDPSLRRSGVGNIFVKNLDKSINNKVLYD 117
Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
+G I S V+ D +G SK +GFV+FE + A +A+E +NG +DR+ +VG+ + +
Sbjct: 118 TVSAFGNILSCKVVCDENG-SKGYGFVHFETHEAAERAIEKMNGTLLNDRKVFVGRFKSR 176
Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
ERE EL + V +F N+YIKN G+ +DDE+LK+LF +FG S KVM D
Sbjct: 177 KEREAELGAK--------VKEFP--NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE 226
Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
SG SKG GFV+F E+A +A+ EMNGK + K +YV AQ+K ER+ L+ +F QM+
Sbjct: 227 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 284
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 61/83 (73%)
Query: 497 TALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEAL 556
T ++ LA+A P++Q+ +LGE L+P ++ + A K+TGMLLE+D +E+LH+LESP++L
Sbjct: 544 TLTASMLASAPPQEQKQMLGERLFPPIQAMHPTLAGKITGMLLEIDNSELLHMLESPQSL 603
Query: 557 KAKVAEAMEVLRSVAQQQANNPA 579
++KV EA+ VL++ ++A A
Sbjct: 604 RSKVDEAVAVLQAHQVKEATQKA 626
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
++ +LYV +LD ++ D +L FS G + S +V + RS G+G+V +++P +A
Sbjct: 289 TRYQVVNLYVKNLDDDIDDERLRKAFSPFGTITSAKVM--MEGGRSKGFGFVCFSSPEEA 346
Query: 85 ARALDVLNFTPLNNKSIRIMYSHR 108
+A+ +N + K + + + R
Sbjct: 347 TKAVTEMNGRIVATKPLYVALAQR 370
>gi|441613453|ref|XP_004088139.1| PREDICTED: polyadenylate-binding protein 1-like [Nomascus
leucogenys]
Length = 638
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 215/402 (53%), Positives = 294/402 (73%), Gaps = 7/402 (1%)
Query: 27 FLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAAR 86
+ T SLYVGDL +VT++ LY+ FS+ G +LS+RVCRD+ T S Y YVN+ +P DA
Sbjct: 8 YPTASLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITPHSSNYAYVNFQHPKDAEH 67
Query: 87 ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
ALD +NF + K +RIM+S RDPS+RKSG GNIF+KNLDKSI++KAL+DT S+FGN+LS
Sbjct: 68 ALDTMNFDVIKGKPLRIMWSQRDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNVLS 127
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AI 204
CK+ D +G SKG+GFV FE +E+A+ AI+K+NG+ +ND++VFVG F ++ERE A
Sbjct: 128 CKVVCDENG-SKGYGFVHFETREAAERAIEKMNGIPLNDRKVFVGRFKSRKEREAELGAR 186
Query: 205 KTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAK 264
+F NV++KN E DE LK +FG++G S VM D GKSK FGFV+FE +DA K
Sbjct: 187 AKEFPNVYIKNFGEDMDDERLKDLFGKFGPTLSVKVMTDQSGKSKGFGFVSFEKHEDAQK 246
Query: 265 AVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSID 324
AV+ +NGK+ + ++ YVG+AQKK ER+ ELK +FEQ ++ + ++Q +NLY+KNL D+ID
Sbjct: 247 AVDEMNGKELNGKQIYVGRAQKKVERQTELKCKFEQMKQDRITRYQVVNLYVKNLDDAID 306
Query: 325 DEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYV 384
DE+L++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +KPLYV
Sbjct: 307 DERLRKAFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Query: 385 AVAQRKEERRARLQAQFSQMR---PVAMGPSVPPRMPMYPPG 423
A+AQRKEER+A L ++ Q + P P + P P P G
Sbjct: 366 ALAQRKEERQAYLTNEYMQRKASVPAVPNPVINPYQPAPPSG 407
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 107/298 (35%), Positives = 174/298 (58%), Gaps = 16/298 (5%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFEN 167
+PS T ++++ +L + L++ FS G ILS ++ D + S + +V F++
Sbjct: 2 NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITPHSSNYAYVNFQH 61
Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
+ A++A+D +N +I K + + +R+ K+ N+FVKNLD+S ++ L
Sbjct: 62 PKDAEHALDTMNFDVIKGKPLRIMW----SQRDPSLRKSGVGNIFVKNLDKSINNKALYD 117
Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
+G + S V+ D +G SK +GFV+FE + A +A+E +NG +DR+ +VG+ + +
Sbjct: 118 TVSAFGNVLSCKVVCDENG-SKGYGFVHFETREAAERAIEKMNGIPLNDRKVFVGRFKSR 176
Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
ERE EL + ++ N+YIKN G+ +DDE+LK+LF +FG S KVM D
Sbjct: 177 KEREAELGARAKEF----------PNVYIKNFGEDMDDERLKDLFGKFGPTLSVKVMTDQ 226
Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
SG SKG GFV+F E+A +A+ EMNGK + K +YV AQ+K ER+ L+ +F QM+
Sbjct: 227 SGKSKGFGFVSFEKHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKCKFEQMK 284
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 58/79 (73%)
Query: 497 TALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEAL 556
T + LA+A P++Q+ +LGE L+PL++ + A K+TGMLLE D +E+LH+LESPE+L
Sbjct: 544 TLTAAMLASAPPKEQKQMLGERLFPLIQAMHPTLAGKITGMLLETDNSELLHMLESPESL 603
Query: 557 KAKVAEAMEVLRSVAQQQA 575
+KV EA+ VL++ ++A
Sbjct: 604 CSKVDEAVVVLQAHQAKEA 622
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 26 QFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAA 85
++ +LYV +LD + D +L FS G + S +V + RS G+G+V +++P +A
Sbjct: 290 RYQVVNLYVKNLDDAIDDERLRKAFSPFGTITSAKVM--MEGGRSKGFGFVCFSSPEEAT 347
Query: 86 RALDVLNFTPLNNKSIRIMYSHR 108
+A+ +N + K + + + R
Sbjct: 348 KAVTEMNGRIVATKPLYVALAQR 370
>gi|171681916|ref|XP_001905901.1| hypothetical protein [Podospora anserina S mat+]
gi|170940917|emb|CAP66567.1| unnamed protein product [Podospora anserina S mat+]
Length = 804
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 240/538 (44%), Positives = 331/538 (61%), Gaps = 82/538 (15%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVG+LD +VT++ L++LFSQ+G V S+RVCRD TRRSLGY YVNY AD +AL
Sbjct: 113 SASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNATADGEKAL 172
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LN+T + + RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++FGNILSCK
Sbjct: 173 EDLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCK 232
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKT 206
+A D +G SKG+GFV +E E+A NAI +NGML+N+K+V+VG+ + K++R++ +K
Sbjct: 233 VAQDENGNSKGYGFVHYETDEAAANAIKHVNGMLLNEKKVYVGYHIPKKDRQSKFEEMKA 292
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
F NV+VKN+ TDE+ +++F +YG +TS+ + R +GKS+ FGFVNF + A+KAV
Sbjct: 293 NFTNVYVKNIPAEVTDEEFRELFAKYGDVTSSSLARSDEGKSRGFGFVNFTTHEAASKAV 352
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
E LNGK F +E YVG+AQKK ERE+EL+ +E A +E +K+QG+NLYIKNLGD +DD+
Sbjct: 353 EELNGKDFRGQELYVGRAQKKHEREEELRRSYEAARQEKANKYQGVNLYIKNLGDDVDDD 412
Query: 327 KLKELFSEFGTITSCKVMRDPS-------------------------------------- 348
KL+++FSE+G ITS KVMRD
Sbjct: 413 KLRQMFSEYGPITSAKVMRDSVVESAAEDEKDKENKKEDEEEKEGETAEKKAETKEKRKL 472
Query: 349 GISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVA 408
G SKG GFV FS P++A++A+ EMN +MI +KPLYVA+AQRK+ R+++L+A +
Sbjct: 473 GKSKGFGFVCFSNPDDATKAVTEMNQRMIDNKPLYVALAQRKDVRKSQLEASIQARNQLR 532
Query: 409 MGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPPQ----MPPRGHAYRYPLGRNMQDFP 464
M + +G+ QQF+ Q P P Q MPP G GR M P
Sbjct: 533 MQQAA---------AQAGIPQQFM--QQPVYYAPGQQPGFMPPAG-------GRGM---P 571
Query: 465 FDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPL 522
F GA GIP + GQ P P+Q +YP+
Sbjct: 572 FAQGA-----------MGIPPQGGRPGQYPPYAGQQGGRGGMPPQQM------PIYPM 612
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Query: 499 LSTALANA-SPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALK 557
L T LA A SP QQ+ +LGESL+P ++ ++ + A K+TGMLLEM+ E+++L+E AL
Sbjct: 708 LHTQLAAAASPAQQKQILGESLFPKIQAIQPELAGKITGMLLEMENQELINLIEDEAALN 767
Query: 558 AKVAEAMEVLRSVAQQQA 575
AKV EAM V + QA
Sbjct: 768 AKVGEAMNVYDEYVKTQA 785
>gi|256075089|ref|XP_002573853.1| polyadenylate binding protein [Schistosoma mansoni]
gi|360044950|emb|CCD82498.1| putative polyadenylate binding protein [Schistosoma mansoni]
Length = 688
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 241/495 (48%), Positives = 322/495 (65%), Gaps = 38/495 (7%)
Query: 18 VAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVN 77
+A A+ + +SLYVGDL V+DS L FS++G VLS RVCRDL+TR SLGYGYVN
Sbjct: 1 MAVSAASQGLMNSSLYVGDLHPRVSDSALQAKFSEIGPVLSARVCRDLATRHSLGYGYVN 60
Query: 78 YANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDT 137
+ +P A +AL+VLN+ L + IRIM+S RDPS+RKSG GNIFIKNLDKSI+ K L+DT
Sbjct: 61 FEDPKHAEQALEVLNYESLMGRPIRIMWSQRDPSLRKSGKGNIFIKNLDKSIEQKELYDT 120
Query: 138 FSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQ 197
FS FG ILSCKI D +GQSKG+GFV FE +E A+ AI+K+N M+I D+ V+VG F+ K
Sbjct: 121 FSFFGRILSCKIVMDENGQSKGYGFVHFEKEECAERAIEKINNMIIRDRVVYVGKFIPKT 180
Query: 198 ERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFE 257
ER++ A K KFNN+++KN T +E LK++F E+G I SA VM+D +GKSK FGFV F
Sbjct: 181 ERKSQARKVKFNNLYIKNFPPETDNEKLKEMFNEFGEIKSACVMKDSEGKSKGFGFVCFL 240
Query: 258 NADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQ-GLNLYI 316
+ D A AV+ ++GK+ + R Y +AQ+K ER++ELK + E+ E + +NLY+
Sbjct: 241 DPDHAENAVKTMHGKEIEGRALYCARAQRKEERQEELKQRLEKQRAERQSSYMLNVNLYV 300
Query: 317 KNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKM 376
KNL D+IDD++L+E FS G+ITS KVM+D + SKG GFV F+ PE+A+RA+ +MNG +
Sbjct: 301 KNLDDNIDDKRLEEAFSVHGSITSAKVMKDANNRSKGFGFVCFANPEQAARAVTDMNGTI 360
Query: 377 IVSKPLYVAVAQRKEERRARL----QAQFSQMR-PVA-MGPSVPPRMPMYPPGPSGLGQQ 430
I SKPLYVA+AQRKE+RRA+L Q + +Q R PVA M P+VP
Sbjct: 361 IGSKPLYVALAQRKEDRRAKLIEEHQQRMAQYRNPVASMIPAVPGHA------------- 407
Query: 431 FLYGQAPPAIIPPQMPPRGHAYRYPLGRNMQDFP-FDMGAGSMLPVPVDMGAGIPRRDAS 489
AP + PP Y +P G + P ++ AG +P +G G+P R
Sbjct: 408 -----APHSFFPPAFQQTQRFY-HPSGAVLSSQPRWNRAAG----IPAQIG-GLPNRPPV 456
Query: 490 VG------QPMPITA 498
G P ITA
Sbjct: 457 AGYYPSAPNPAAITA 471
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 42/60 (70%)
Query: 501 TALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKV 560
+ALA S E Q+ LGE LYP ++ + + A K+TGMLL +D EV++LLES E L+AKV
Sbjct: 622 SALAQLSEEDQKRTLGEHLYPRIKAMYPNLANKLTGMLLGVDNAEVINLLESEELLRAKV 681
>gi|428183055|gb|EKX51914.1| hypothetical protein GUITHDRAFT_84932 [Guillardia theta CCMP2712]
Length = 616
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 215/376 (57%), Positives = 277/376 (73%), Gaps = 4/376 (1%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVGDLD NVT+ QL+++FS VG V S+RVCRD TRRSLGY YVN+ N DA RAL
Sbjct: 23 SASLYVGDLDPNVTEPQLFEVFSVVGPVASIRVCRDAMTRRSLGYAYVNFHNVVDAERAL 82
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
D LN+T + K+ RIM+ HRDPSIRKSG GNIFIKNLDK++D + LHDTFS FGNILSCK
Sbjct: 83 DTLNYTQIKGKACRIMWKHRDPSIRKSGAGNIFIKNLDKTVDTRTLHDTFSQFGNILSCK 142
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKF 208
++ D S+GFGFVQFE E A AI K+NGML+ DK++FVG F+ + ERE+ + +F
Sbjct: 143 VSMDEHANSRGFGFVQFETAEEANEAISKVNGMLLEDKRLFVGPFIPRGERESTNGERRF 202
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NV+VKN ++ +D+D +K F YG ITS +MR DG SKCFGFVNF+ ADDA K E
Sbjct: 203 TNVYVKNFPDNVSDDDFRKSFERYGEITSCKIMRKEDGTSKCFGFVNFKEADDAKKCCEE 262
Query: 269 LNGKK--FDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
+NG+K +R+ Y G+A+K+SER+++LK +++Q E + Q +NLYIKNL D+IDDE
Sbjct: 263 MNGQKPFGGERDIYAGRAEKESERKEKLKKKYDQIRMERLKNNQLVNLYIKNLDDTIDDE 322
Query: 327 KLKELFSEFGTITSCKVMRDPS--GISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYV 384
KL++ F +FGTITS KVMRD +SKG GFV F+ PEEA+RA+ MNG+M+ +KP+YV
Sbjct: 323 KLRQTFEQFGTITSAKVMRDKDRPEVSKGFGFVCFAQPEEATRAVTAMNGQMVGTKPIYV 382
Query: 385 AVAQRKEERRARLQAQ 400
A+ Q E RR AQ
Sbjct: 383 ALHQPIEIRRQMQAAQ 398
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 499 LSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLE-MDQTEVLHLLESPEALK 557
L L NA P Q + +LGE LY L++ + A K+TGMLLE +D +E++ L++ EAL+
Sbjct: 534 LMALLVNAPPAQAKQILGERLYALIQAEQGPLAGKITGMLLEGLDNSELIALIDDAEALR 593
Query: 558 AKV 560
+K+
Sbjct: 594 SKI 596
>gi|256075085|ref|XP_002573851.1| polyadenylate binding protein [Schistosoma mansoni]
gi|360044948|emb|CCD82496.1| putative polyadenylate binding protein [Schistosoma mansoni]
Length = 726
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 241/495 (48%), Positives = 322/495 (65%), Gaps = 38/495 (7%)
Query: 18 VAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVN 77
+A A+ + +SLYVGDL V+DS L FS++G VLS RVCRDL+TR SLGYGYVN
Sbjct: 1 MAVSAASQGLMNSSLYVGDLHPRVSDSALQAKFSEIGPVLSARVCRDLATRHSLGYGYVN 60
Query: 78 YANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDT 137
+ +P A +AL+VLN+ L + IRIM+S RDPS+RKSG GNIFIKNLDKSI+ K L+DT
Sbjct: 61 FEDPKHAEQALEVLNYESLMGRPIRIMWSQRDPSLRKSGKGNIFIKNLDKSIEQKELYDT 120
Query: 138 FSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQ 197
FS FG ILSCKI D +GQSKG+GFV FE +E A+ AI+K+N M+I D+ V+VG F+ K
Sbjct: 121 FSFFGRILSCKIVMDENGQSKGYGFVHFEKEECAERAIEKINNMIIRDRVVYVGKFIPKT 180
Query: 198 ERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFE 257
ER++ A K KFNN+++KN T +E LK++F E+G I SA VM+D +GKSK FGFV F
Sbjct: 181 ERKSQARKVKFNNLYIKNFPPETDNEKLKEMFNEFGEIKSACVMKDSEGKSKGFGFVCFL 240
Query: 258 NADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQ-GLNLYI 316
+ D A AV+ ++GK+ + R Y +AQ+K ER++ELK + E+ E + +NLY+
Sbjct: 241 DPDHAENAVKTMHGKEIEGRALYCARAQRKEERQEELKQRLEKQRAERQSSYMLNVNLYV 300
Query: 317 KNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKM 376
KNL D+IDD++L+E FS G+ITS KVM+D + SKG GFV F+ PE+A+RA+ +MNG +
Sbjct: 301 KNLDDNIDDKRLEEAFSVHGSITSAKVMKDANNRSKGFGFVCFANPEQAARAVTDMNGTI 360
Query: 377 IVSKPLYVAVAQRKEERRARL----QAQFSQMR-PVA-MGPSVPPRMPMYPPGPSGLGQQ 430
I SKPLYVA+AQRKE+RRA+L Q + +Q R PVA M P+VP
Sbjct: 361 IGSKPLYVALAQRKEDRRAKLIEEHQQRMAQYRNPVASMIPAVPGHA------------- 407
Query: 431 FLYGQAPPAIIPPQMPPRGHAYRYPLGRNMQDFP-FDMGAGSMLPVPVDMGAGIPRRDAS 489
AP + PP Y +P G + P ++ AG +P +G G+P R
Sbjct: 408 -----APHSFFPPAFQQTQRFY-HPSGAVLSSQPRWNRAAG----IPAQIG-GLPNRPPV 456
Query: 490 VG------QPMPITA 498
G P ITA
Sbjct: 457 AGYYPSAPNPAAITA 471
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 50/76 (65%)
Query: 501 TALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKV 560
+ALA S E Q+ LGE LYP ++ + + A K+TGMLL +D EV++LLES E L+AK
Sbjct: 622 SALAQLSEEDQKRTLGEHLYPRIKAMYPNLANKLTGMLLGVDNAEVINLLESEELLRAKC 681
Query: 561 AEAMEVLRSVAQQQAN 576
E + VLRS QQ +
Sbjct: 682 EEGINVLRSSQNQQGD 697
>gi|256075087|ref|XP_002573852.1| polyadenylate binding protein [Schistosoma mansoni]
gi|360044949|emb|CCD82497.1| putative polyadenylate binding protein [Schistosoma mansoni]
Length = 724
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 241/495 (48%), Positives = 322/495 (65%), Gaps = 38/495 (7%)
Query: 18 VAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVN 77
+A A+ + +SLYVGDL V+DS L FS++G VLS RVCRDL+TR SLGYGYVN
Sbjct: 1 MAVSAASQGLMNSSLYVGDLHPRVSDSALQAKFSEIGPVLSARVCRDLATRHSLGYGYVN 60
Query: 78 YANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDT 137
+ +P A +AL+VLN+ L + IRIM+S RDPS+RKSG GNIFIKNLDKSI+ K L+DT
Sbjct: 61 FEDPKHAEQALEVLNYESLMGRPIRIMWSQRDPSLRKSGKGNIFIKNLDKSIEQKELYDT 120
Query: 138 FSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQ 197
FS FG ILSCKI D +GQSKG+GFV FE +E A+ AI+K+N M+I D+ V+VG F+ K
Sbjct: 121 FSFFGRILSCKIVMDENGQSKGYGFVHFEKEECAERAIEKINNMIIRDRVVYVGKFIPKT 180
Query: 198 ERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFE 257
ER++ A K KFNN+++KN T +E LK++F E+G I SA VM+D +GKSK FGFV F
Sbjct: 181 ERKSQARKVKFNNLYIKNFPPETDNEKLKEMFNEFGEIKSACVMKDSEGKSKGFGFVCFL 240
Query: 258 NADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQ-GLNLYI 316
+ D A AV+ ++GK+ + R Y +AQ+K ER++ELK + E+ E + +NLY+
Sbjct: 241 DPDHAENAVKTMHGKEIEGRALYCARAQRKEERQEELKQRLEKQRAERQSSYMLNVNLYV 300
Query: 317 KNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKM 376
KNL D+IDD++L+E FS G+ITS KVM+D + SKG GFV F+ PE+A+RA+ +MNG +
Sbjct: 301 KNLDDNIDDKRLEEAFSVHGSITSAKVMKDANNRSKGFGFVCFANPEQAARAVTDMNGTI 360
Query: 377 IVSKPLYVAVAQRKEERRARL----QAQFSQMR-PVA-MGPSVPPRMPMYPPGPSGLGQQ 430
I SKPLYVA+AQRKE+RRA+L Q + +Q R PVA M P+VP
Sbjct: 361 IGSKPLYVALAQRKEDRRAKLIEEHQQRMAQYRNPVASMIPAVPGHA------------- 407
Query: 431 FLYGQAPPAIIPPQMPPRGHAYRYPLGRNMQDFP-FDMGAGSMLPVPVDMGAGIPRRDAS 489
AP + PP Y +P G + P ++ AG +P +G G+P R
Sbjct: 408 -----APHSFFPPAFQQTQRFY-HPSGAVLSSQPRWNRAAG----IPAQIG-GLPNRPPV 456
Query: 490 VG------QPMPITA 498
G P ITA
Sbjct: 457 AGYYPSAPNPAAITA 471
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 50/76 (65%)
Query: 501 TALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKV 560
+ALA S E Q+ LGE LYP ++ + + A K+TGMLL +D EV++LLES E L+AK
Sbjct: 620 SALAQLSEEDQKRTLGEHLYPRIKAMYPNLANKLTGMLLGVDNAEVINLLESEELLRAKC 679
Query: 561 AEAMEVLRSVAQQQAN 576
E + VLRS QQ +
Sbjct: 680 EEGINVLRSSQNQQGD 695
>gi|56758360|gb|AAW27320.1| SJCHGC06322 protein [Schistosoma japonicum]
Length = 721
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 221/404 (54%), Positives = 294/404 (72%), Gaps = 7/404 (1%)
Query: 18 VAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVN 77
+A + + +SLYVGDL V+DS L FS++G VLS RVCRDL+TR+SLGYGYVN
Sbjct: 1 MAVTVASQGLMNSSLYVGDLHPRVSDSALQAKFSEIGPVLSARVCRDLATRQSLGYGYVN 60
Query: 78 YANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDT 137
+ +P A +AL+VLN+ PL + IRIM+S RDPS+RKSG GNIFIKNLDKSI+ K L+DT
Sbjct: 61 FEDPKHAEQALEVLNYEPLMGRPIRIMWSQRDPSLRKSGKGNIFIKNLDKSIEQKELYDT 120
Query: 138 FSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQ 197
FS FG ILSCKI D +GQSKG+GFV FE +E A+ AI+K+N M+I D+ V+VG F+ K
Sbjct: 121 FSFFGRILSCKIVMDENGQSKGYGFVHFEKEECAERAIEKINNMIIRDRVVYVGKFIPKT 180
Query: 198 ERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFE 257
ER++ A K KFNN++VKN T +E LK++F E+G I SA VM+D +GKSK FGFV +
Sbjct: 181 ERKSQARKVKFNNLYVKNFPPETDNEKLKEMFSEFGEIKSACVMKDNEGKSKGFGFVCYL 240
Query: 258 NADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQ-GLNLYI 316
+ D A AV ++GK+ + R Y +AQ+K ER++ELK + E+ E + +NLY+
Sbjct: 241 DPDHAENAVRTMHGKEIEGRVLYCARAQRKEERQEELKQKIEKQRAERQSNYMLNVNLYV 300
Query: 317 KNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKM 376
KNL D+IDD++L+E FS G+ITS KVM+D + SKG GFV F+ PE+A+RA+ +MNG +
Sbjct: 301 KNLDDNIDDKRLEEAFSVHGSITSAKVMKDANNRSKGFGFVCFANPEQAARAVTDMNGTI 360
Query: 377 IVSKPLYVAVAQRKEERRARL----QAQFSQMR-PVA-MGPSVP 414
I SKPLYVA+AQRKE+RRA+L Q + +Q R PVA M P+VP
Sbjct: 361 IGSKPLYVALAQRKEDRRAKLIEEHQQRLAQYRAPVASMIPAVP 404
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 46/74 (62%)
Query: 501 TALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKV 560
+ALA S Q+ LGE L+P ++ + A K+TGMLL +D EV++LLES + L+AK
Sbjct: 621 SALAQLSEVDQKRALGEHLFPRIQTMYPTLARKLTGMLLGVDNAEVINLLESDDLLRAKC 680
Query: 561 AEAMEVLRSVAQQQ 574
E + VL S QQ
Sbjct: 681 EEGISVLESSQNQQ 694
>gi|293337013|ref|NP_001169661.1| uncharacterized protein LOC100383542 [Zea mays]
gi|224030689|gb|ACN34420.1| unknown [Zea mays]
Length = 442
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 226/437 (51%), Positives = 298/437 (68%), Gaps = 30/437 (6%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
SLYVGDL V + QL+ LFSQV V +VRVCRD+ + SLGYGYVN+ + +A RAL+
Sbjct: 2 ASLYVGDLAETVDEPQLHALFSQVAPVATVRVCRDILSGVSLGYGYVNFYSRQEATRALE 61
Query: 90 VLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKI 149
LNFTPL K IR+M+S+RDPS+RKSG N+F+KNL+ +ID K L++ FSSFG ILSCK+
Sbjct: 62 ALNFTPLIGKYIRVMFSNRDPSLRKSGRANLFVKNLEPNIDSKNLYEIFSSFGAILSCKV 121
Query: 150 ATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFN 209
ATD +GQSKG+GFVQ+E +ESA+ AI+ LNGML N++++FVG +R+++RE KF
Sbjct: 122 ATDSAGQSKGYGFVQYETEESAEAAINGLNGMLANNRKMFVGLHMRRRDREV-----KFT 176
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEAL 269
NV++KNL +++DL++ F +G ITSAVVMRD DG SKCFGFVNF+ + A +AVE
Sbjct: 177 NVYIKNLPTEFSEDDLRQEFAPFGEITSAVVMRDADGASKCFGFVNFKKPEFAIEAVEKA 236
Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLK 329
NGK D+ YVG+AQKK ER+ ELK +F + VDK G+NLY+KN+ D I+DE LK
Sbjct: 237 NGKAIGDKTLYVGRAQKKEERKAELKTRFGRGRDNKVDKPNGINLYLKNIDDGINDEGLK 296
Query: 330 ELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQR 389
+LF EFG + SCKVM D G SKGSGFV+F+T E RA+ MNG+++ KPLYV +AQ
Sbjct: 297 KLFEEFGQVASCKVMVDARGRSKGSGFVSFATAEAGQRAINRMNGRIVGKKPLYVGLAQP 356
Query: 390 KEERRARLQAQFSQM------------------RPVAMGPSVPPRMPMYPPGPSGLGQQF 431
KEER+A L A F+Q P + GP PP+ ++ G Q F
Sbjct: 357 KEERKAMLMAHFAQRNLAMAASQYAGPQQVYFGHPSSPGPIAPPQGAVF-----GFPQHF 411
Query: 432 LYGQAP--PAIIPPQMP 446
+ G P P ++PP P
Sbjct: 412 VPGMGPISPVMMPPLRP 428
>gi|195487595|ref|XP_002091975.1| GE11925 [Drosophila yakuba]
gi|194178076|gb|EDW91687.1| GE11925 [Drosophila yakuba]
Length = 634
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 219/374 (58%), Positives = 281/374 (75%), Gaps = 3/374 (0%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL +V +S L+D FS G VLS+RVCRD+ TRRSLGY YVN+ PADA RALD
Sbjct: 3 SLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALDT 62
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF + NK IRIM+S RDPS+R+SG GN+FIKNLDK+ID+KA++DTFS+FGNILSCK+A
Sbjct: 63 MNFDLVRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDKAIDNKAIYDTFSAFGNILSCKVA 122
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET-VAIKTK-F 208
TD G SKG+GFV FE +E+A +IDK+NGML+N K+V+VG F+ ++ERE + K K F
Sbjct: 123 TDEKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLF 182
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NV+VKN E DE LK+ F YG ITS VM DGKSK FGFV FE + A AV+A
Sbjct: 183 TNVYVKNFTEDFDDEKLKEFFEPYGKITSYKVMSKEDGKSKGFGFVAFETTEAAEAAVQA 242
Query: 269 LNGKKF-DDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEK 327
LNGK + + YV +AQKK+ER+QELK +FE+ ++ + G+NLY+KNL D+IDD++
Sbjct: 243 LNGKDMGEGKSLYVARAQKKAERQQELKRKFEELKQKRHESVFGVNLYVKNLDDTIDDDR 302
Query: 328 LKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 387
L+ FS +G ITS KVM D G SKG GFV F+ P EA+ A+ E+NG+++ SKPLYVA+A
Sbjct: 303 LRVAFSPYGNITSAKVMTDEEGRSKGFGFVCFNAPSEATCAVTELNGRVVGSKPLYVALA 362
Query: 388 QRKEERRARLQAQF 401
QRKEER+A L +Q+
Sbjct: 363 QRKEERKAHLASQY 376
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 105/290 (36%), Positives = 165/290 (56%), Gaps = 16/290 (5%)
Query: 118 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAID 176
++++ +L + ++ L D FSS G +LS ++ D + +S G+ +V F+ A+ A+D
Sbjct: 2 ASLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALD 61
Query: 177 KLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTIT 236
+N L+ +K + + +R+ ++ NVF+KNLD++ ++ + F +G I
Sbjct: 62 TMNFDLVRNKPIRIMW----SQRDPSLRRSGVGNVFIKNLDKAIDNKAIYDTFSAFGNIL 117
Query: 237 SAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKG 296
S V D G SK +GFV+FE + A +++ +NG + ++ YVGK + ERE+EL
Sbjct: 118 SCKVATDEKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKEREKELG- 176
Query: 297 QFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGF 356
E+A T N+Y+KN + DDEKLKE F +G ITS KVM G SKG GF
Sbjct: 177 --EKAKLFT-------NVYVKNFTEDFDDEKLKEFFEPYGKITSYKVMSKEDGKSKGFGF 227
Query: 357 VAFSTPEEASRALAEMNGK-MIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
VAF T E A A+ +NGK M K LYVA AQ+K ER+ L+ +F +++
Sbjct: 228 VAFETTEAAEAAVQALNGKDMGEGKSLYVARAQKKAERQQELKRKFEELK 277
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 100/292 (34%), Positives = 156/292 (53%), Gaps = 22/292 (7%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ +LD + + +YD FS G +LS +V D S GYG+V++ A ++D
Sbjct: 91 NVFIKNLDKAIDNKAIYDTFSAFGNILSCKVATD-EKGNSKGYGFVHFETEEAANTSIDK 149
Query: 91 LNFTPLNNKSIRI-MYSHRDPSIRKSGT-----GNIFIKNLDKSIDHKALHDTFSSFGNI 144
+N LN K + + + R ++ G N+++KN + D + L + F +G I
Sbjct: 150 VNGMLLNGKKVYVGKFIPRKEREKELGEKAKLFTNVYVKNFTEDFDDEKLKEFFEPYGKI 209
Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLIND-KQVFVGHFLRKQERETVA 203
S K+ + G+SKGFGFV FE E+A+ A+ LNG + + K ++V +K ER+
Sbjct: 210 TSYKVMSKEDGKSKGFGFVAFETTEAAEAAVQALNGKDMGEGKSLYVARAQKKAERQQ-E 268
Query: 204 IKTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKC 250
+K KF N++VKNLD++ D+ L+ F YG ITSA VM D +G+SK
Sbjct: 269 LKRKFEELKQKRHESVFGVNLYVKNLDDTIDDDRLRVAFSPYGNITSAKVMTDEEGRSKG 328
Query: 251 FGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAM 302
FGFV F +A AV LNG+ + YV AQ+K ER+ L Q+ + M
Sbjct: 329 FGFVCFNAPSEATCAVTELNGRVVGSKPLYVALAQRKEERKAHLASQYMRHM 380
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 56/70 (80%)
Query: 499 LSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKA 558
+++ LANA P++Q+ +LGE LYP++E + + A K+TGMLLE++ +E+LH++E EALKA
Sbjct: 556 IASLLANAKPQEQKQILGERLYPMIEHMHANLAGKITGMLLEIENSELLHMIEDQEALKA 615
Query: 559 KVAEAMEVLR 568
KV EA+ VL+
Sbjct: 616 KVEEAVAVLQ 625
>gi|82802757|gb|ABB92429.1| PABP3 [Hylobates lar]
Length = 635
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 215/402 (53%), Positives = 294/402 (73%), Gaps = 7/402 (1%)
Query: 27 FLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAAR 86
+ T SLYVGDL +VT++ LY+ FS+ G +LS+RVCRD+ TRRS Y YVN+ +P DA
Sbjct: 8 YPTASLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRSSNYAYVNFQHPKDAEH 67
Query: 87 ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
ALD +NF + K +RIM+S RDPS+RKSG GNIF+KNLDKSI++KAL+DT S+FGN+LS
Sbjct: 68 ALDTMNFDVIKGKPLRIMWSQRDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNVLS 127
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AI 204
CK+ D +G SKG+GFV F +E+A+ AI+K+NG+ +ND +VFVG F ++ERE A
Sbjct: 128 CKVVCDENG-SKGYGFVHFGTREAAERAIEKMNGIPLNDCKVFVGRFKSRKEREAELGAR 186
Query: 205 KTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAK 264
+F NV++KN E DE LK +FG++G S VM D GKSK FGFV+FE +DA K
Sbjct: 187 AKEFPNVYIKNFGEDMDDERLKDLFGKFGPTLSVKVMTDQSGKSKGFGFVSFEKHEDAQK 246
Query: 265 AVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSID 324
AV+ +NGK+ + ++ YVG+AQKK ER+ ELK +FEQ ++ + ++Q +NLY+KNL D+ID
Sbjct: 247 AVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQVVNLYVKNLDDAID 306
Query: 325 DEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYV 384
DE+L++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ ++PLYV
Sbjct: 307 DERLRKAFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATEPLYV 365
Query: 385 AVAQRKEERRARLQAQFSQMR---PVAMGPSVPPRMPMYPPG 423
A+AQRKEER+A L ++ Q + P P + P P P G
Sbjct: 366 ALAQRKEERQAYLTNEYMQRKASVPAVPNPVINPYQPAPPSG 407
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 105/298 (35%), Positives = 173/298 (58%), Gaps = 16/298 (5%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFEN 167
+PS T ++++ +L + L++ FS G ILS ++ D + +S + +V F++
Sbjct: 2 NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRSSNYAYVNFQH 61
Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
+ A++A+D +N +I K + + +R+ K+ N+FVKNLD+S ++ L
Sbjct: 62 PKDAEHALDTMNFDVIKGKPLRIMW----SQRDPSLRKSGVGNIFVKNLDKSINNKALYD 117
Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
+G + S V+ D +G SK +GFV+F + A +A+E +NG +D + +VG+ + +
Sbjct: 118 TVSAFGNVLSCKVVCDENG-SKGYGFVHFGTREAAERAIEKMNGIPLNDCKVFVGRFKSR 176
Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
ERE EL + ++ N+YIKN G+ +DDE+LK+LF +FG S KVM D
Sbjct: 177 KEREAELGARAKEF----------PNVYIKNFGEDMDDERLKDLFGKFGPTLSVKVMTDQ 226
Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
SG SKG GFV+F E+A +A+ EMNGK + K +YV AQ+K ER+ L+ +F QM+
Sbjct: 227 SGKSKGFGFVSFEKHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 284
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 59/83 (71%)
Query: 497 TALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEAL 556
T + LA+A P++Q+ +LGE L+PL++ + A K+TGMLLE D +E+LH+LESPE+L
Sbjct: 544 TLTAAMLASAPPKEQKQMLGERLFPLIQAMHPTLAGKITGMLLETDNSELLHMLESPESL 603
Query: 557 KAKVAEAMEVLRSVAQQQANNPA 579
+KV EA+ VL++ ++A A
Sbjct: 604 CSKVDEAVVVLQAHQAKEATQKA 626
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
++ +LYV +LD + D +L FS G + S +V + RS G+G+V +++P +A
Sbjct: 289 TRYQVVNLYVKNLDDAIDDERLRKAFSPFGTITSAKVM--MEGGRSKGFGFVCFSSPEEA 346
Query: 85 ARALDVLN 92
+A+ +N
Sbjct: 347 TKAVTEMN 354
>gi|195024447|ref|XP_001985876.1| GH21052 [Drosophila grimshawi]
gi|193901876|gb|EDW00743.1| GH21052 [Drosophila grimshawi]
Length = 645
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 217/374 (58%), Positives = 283/374 (75%), Gaps = 3/374 (0%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL ++ ++ L++ FS G VLS+RVCRD+ TRRSLGY YVN+ PADA RALD
Sbjct: 3 SLYVGDLHQDINEAGLFEKFSTAGPVLSIRVCRDVVTRRSLGYAYVNFQQPADAERALDT 62
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF + NK IRIM+S RDPS+R+SG GN+FIKNLDK+ID+KA++DTFS+FGNILSCK+A
Sbjct: 63 MNFDLVRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDKAIDNKAIYDTFSAFGNILSCKVA 122
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET-VAIKTK-F 208
TD G SKG+GFV FE +E+A +IDK+NGML+N K+V+VG F+ ++ERE + K K F
Sbjct: 123 TDEKGHSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLF 182
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NV++KN + DE LK+ F YG ITS VM DGKSK FGFV +E + A AV+A
Sbjct: 183 TNVYIKNFTDEFDDEKLKENFEPYGKITSYKVMSKDDGKSKGFGFVAYETTEAAEAAVQA 242
Query: 269 LNGKKF-DDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEK 327
LNGK + + YV +AQKK+ER+QELK +FE+ K+ + G+NLY+KNL DSIDDE+
Sbjct: 243 LNGKDMGEGKTLYVARAQKKAERQQELKRKFEELKKKRHESVFGVNLYVKNLDDSIDDER 302
Query: 328 LKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 387
L++ FS +GTITS KVM D G SKG GFV F +P EA+ A+ E+NG+++ SKPLYVA+A
Sbjct: 303 LRKEFSLYGTITSAKVMTDEEGRSKGFGFVCFISPNEATCAVTELNGRVVGSKPLYVALA 362
Query: 388 QRKEERRARLQAQF 401
QRKEER+A L +Q+
Sbjct: 363 QRKEERKAHLASQY 376
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 56/70 (80%)
Query: 499 LSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKA 558
+++ LANA P++Q+ +LGE LYP++E++ A K+TGMLLE++ +E+LH+LE EALKA
Sbjct: 567 IASLLANAKPQEQKQILGERLYPMIERMHAALAGKITGMLLEIENSELLHMLEDQEALKA 626
Query: 559 KVAEAMEVLR 568
KV EA+ VL+
Sbjct: 627 KVEEAVAVLQ 636
>gi|313219101|emb|CBY43303.1| unnamed protein product [Oikopleura dioica]
Length = 512
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 250/522 (47%), Positives = 336/522 (64%), Gaps = 45/522 (8%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL ++T++ LYD F G VLS+RVCRD+ TRRSLGY YVN+ PADA RALD
Sbjct: 3 SLYVGDLHPDITEAMLYDKFQASGPVLSIRVCRDMVTRRSLGYAYVNFQQPADAERALDT 62
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF + K IRIM+S RDPS+R+SG GN+FIKNLD+SID+KAL+DTFSSFGNILSCK+
Sbjct: 63 MNFDVIKGKPIRIMWSQRDPSLRRSGQGNVFIKNLDRSIDNKALYDTFSSFGNILSCKVV 122
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER--ETVAIKTKF 208
D +G SKGFGFV +E+ ESAQ AI+K+NGML+ DK+VFV F + +R E F
Sbjct: 123 CDING-SKGFGFVHYESDESAQRAIEKVNGMLMEDKKVFVARFKSRNDRMREFGDAAKHF 181
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITS-AVVMRDGDGKSKCFGFVNFENADDAAKAVE 267
N+FVKNL +S + L + F ++G + S V+ + G SKC GF++F+ D A AVE
Sbjct: 182 TNLFVKNLPDSWDTDALLENFEQFGEVVSHKVICDETTGLSKCHGFISFKEHDQAEAAVE 241
Query: 268 ALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEK 327
++ K+ + ++ Y G+AQKK+ER ELK ++E+ +E + ++QG+NLY+KNL DSIDDE
Sbjct: 242 IMHEKEIEGKKLYCGRAQKKAERSSELKAKYEKIKQERIQRYQGVNLYVKNLDDSIDDEG 301
Query: 328 LKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 387
L+E F +FG ITS KV+ D +G SKG GFV FS+PEEA++A+ EMNG++ KPLYV +A
Sbjct: 302 LREAFKQFGNITSAKVITDLNGRSKGFGFVCFSSPEEATKAVTEMNGRIFGGKPLYVGLA 361
Query: 388 QRKEERRARLQAQFSQ-----MRPVA-MGPSV------PPRMPMYPPGPSGLGQQFLYG- 434
QRKE+R+A LQ Q+ Q +R A MG V PPR + P Q F G
Sbjct: 362 QRKEDRKAHLQQQYMQRVSTGIRMQAFMGNQVVNQNFQPPRY-ILPTMQGQPVQMFPQGT 420
Query: 435 ---QAPPAIIPP----QMPPR---------GHAYRY-PLGRNMQDFPFDMGAGSMLPVPV 477
+A P PP QMP G +R P RN+Q P ++ +
Sbjct: 421 PMVRATPRWAPPNQRVQMPGMIRGRMAQQGGPQFRLTPSVRNVQ-IPSEV---------I 470
Query: 478 DMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESL 519
M +P ++ G P T S+ LANA+P++Q+ +LGE L
Sbjct: 471 QMPPQMPHQNQPAGDQAPETLTSSMLANANPQEQKQMLGERL 512
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 100/187 (53%), Gaps = 16/187 (8%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
T+L+V +L + L + F Q G+V+S +V D +T S +G++++ A A++
Sbjct: 182 TNLFVKNLPDSWDTDALLENFEQFGEVVSHKVICDETTGLSKCHGFISFKEHDQAEAAVE 241
Query: 90 VLNFTPLNNKSIRIMYSHRDPS----------------IRKSGTGNIFIKNLDKSIDHKA 133
+++ + K + + + I++ N+++KNLD SID +
Sbjct: 242 IMHEKEIEGKKLYCGRAQKKAERSSELKAKYEKIKQERIQRYQGVNLYVKNLDDSIDDEG 301
Query: 134 LHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHF 193
L + F FGNI S K+ TD +G+SKGFGFV F + E A A+ ++NG + K ++VG
Sbjct: 302 LREAFKQFGNITSAKVITDLNGRSKGFGFVCFSSPEEATKAVTEMNGRIFGGKPLYVGLA 361
Query: 194 LRKQERE 200
RK++R+
Sbjct: 362 QRKEDRK 368
>gi|121702907|ref|XP_001269718.1| polyadenylate-binding protein [Aspergillus clavatus NRRL 1]
gi|158512635|sp|A1CRM1.1|PABP_ASPCL RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|119397861|gb|EAW08292.1| polyadenylate-binding protein [Aspergillus clavatus NRRL 1]
Length = 754
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 216/430 (50%), Positives = 291/430 (67%), Gaps = 55/430 (12%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
NQ + SLYVG+LD +VT++ LY+LFS +GQV S+RVCRD TRRSLGY YVNY N AD
Sbjct: 46 NQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADG 105
Query: 85 ARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNI 144
RAL+ LN+T + K RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++FGNI
Sbjct: 106 ERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNI 165
Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV-- 202
LSCK+A D G SKG+GFV +E E+A NAI +NGML+NDK+VFVGH + K++R++
Sbjct: 166 LSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFD 225
Query: 203 AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDA 262
+K F N+++KN+D T+E+ +KIF ++G ITSA + RD +GKS+ FGFVN+ + A
Sbjct: 226 EMKANFTNIYIKNIDPDVTEEEFRKIFEQFGEITSATLSRDPEGKSRGFGFVNYSTHESA 285
Query: 263 AKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDS 322
AV+ ++ K+ ++ YVG+AQKK ERE+EL+ Q+E A E K+QG+NLY+KNL D
Sbjct: 286 QAAVDEMHDKEVKTQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLTDD 345
Query: 323 IDDEKLKELFSEFGTITSCKVMRDPS---------------------------------- 348
+DDEKL+ELF +GTITS KVMRD +
Sbjct: 346 VDDEKLRELFGPYGTITSAKVMRDSTPAERTETPDSEKEKEVNKENEKKEDEEKAAEEKP 405
Query: 349 -------------------GISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQR 389
G SKG GFV FS+P+EAS+A+ EMN +M+ KPLYVA+AQR
Sbjct: 406 KESDEEKKDETKKSDKKLLGKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKPLYVALAQR 465
Query: 390 KEERRARLQA 399
K+ RR++L+A
Sbjct: 466 KDVRRSQLEA 475
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 97/293 (33%), Positives = 159/293 (54%), Gaps = 21/293 (7%)
Query: 117 TGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAI 175
+ ++++ LD S+ L++ FSS G + S ++ D + +S G+ +V + N + A+
Sbjct: 50 SASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERAL 109
Query: 176 DKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTI 235
+ LN LI K + +R+ KT NVF+KNLD + ++ L F +G I
Sbjct: 110 EDLNYTLIKGKPCRI----MWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNI 165
Query: 236 TSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQ--- 292
S V +D G SK +GFV++E A+ A A++ +NG +D++ +VG K +R+
Sbjct: 166 LSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFD 225
Query: 293 ELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISK 352
E+K F N+YIKN+ + +E+ +++F +FG ITS + RDP G S+
Sbjct: 226 EMKANF-------------TNIYIKNIDPDVTEEEFRKIFEQFGEITSATLSRDPEGKSR 272
Query: 353 GSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
G GFV +ST E A A+ EM+ K + ++ LYV AQ+K ER L+ Q+ R
Sbjct: 273 GFGFVNYSTHESAQAAVDEMHDKEVKTQKLYVGRAQKKHEREEELRKQYEAAR 325
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
Query: 495 PITALST-ALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESP 553
P AL+ AL A+P QQ+ +LGE+LYP ++ + + A K+TGMLLEMD TE+L LLE
Sbjct: 648 PAGALTAQALNAAAPPQQKQMLGEALYPKIQAQQPELAGKITGMLLEMDNTELLGLLEDD 707
Query: 554 EALKAKVAEAMEV 566
+AL+AKV EA+ V
Sbjct: 708 DALRAKVDEALSV 720
>gi|320167378|gb|EFW44277.1| poly A binding protein [Capsaspora owczarzaki ATCC 30864]
Length = 662
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 238/472 (50%), Positives = 317/472 (67%), Gaps = 25/472 (5%)
Query: 27 FLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAAR 86
F + SLYVGDL VT++QL+++F+ +G V+S+RVCRD TRRSLGY YVN+ DA R
Sbjct: 42 FPSGSLYVGDLHPEVTEAQLFEIFNNIGPVVSIRVCRDAITRRSLGYAYVNFHAAVDAER 101
Query: 87 ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
ALD LN++ + K RIM+S RDP++RKSG GN+FIKNLDK+ID+KAL DTFS+FGNILS
Sbjct: 102 ALDTLNYSLIRGKPCRIMWSQRDPAVRKSGLGNVFIKNLDKTIDNKALLDTFSAFGNILS 161
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER-ETVAIK 205
CK+ TD +G SKG+GFV +E +E+A+ AI K+NGM+IN KQVFVG F+ ++ER E
Sbjct: 162 CKVVTDENG-SKGYGFVHYETQEAAETAIAKVNGMVINGKQVFVGIFVPRKERVELGEGV 220
Query: 206 TKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENADDAAK 264
TKF NVFVKNL E TTD L +F ++G ITS V+M+ D KSK FGFV +E +DA
Sbjct: 221 TKFTNVFVKNLPEDTTDAALNDMFSKFGKITSVVIMKSSDDDKSKGFGFVCYEKVEDAQA 280
Query: 265 AVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSID 324
AV ALNG + + +V +AQKK+ERE ELK +++ E ++K+QG+NLY+KNL D+ID
Sbjct: 281 AVNALNGTELAGKTLFVARAQKKAEREAELKQRYDALRLERINKYQGINLYVKNLDDAID 340
Query: 325 DEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMI--VSKPL 382
++K++ F+ FGTITS K+MRD G S+G GF+ FS+ EEA++A+ EMNG+ I KPL
Sbjct: 341 EDKIRTEFAPFGTITSVKIMRDEKGKSRGFGFICFSSAEEATKAVTEMNGQTIQGFPKPL 400
Query: 383 YVAVAQRKEERRARLQAQFSQMR----PVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPP 438
YVA+AQR E+RRA+L A F+Q R G + P Y GP Q Y P
Sbjct: 401 YVALAQRAEDRRAQLAAHFAQQRGNMGGRMAGGVIAGMPPQYMAGP-----QMFYAGVPQ 455
Query: 439 --AIIPPQMPPRGHAY--RYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRR 486
++ PQ R A+ P+G P G G + VP G+PR+
Sbjct: 456 NRGMVYPQNVMRRGAWPANVPVGVAAGARP---GFGPFMAVP----QGVPRQ 500
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 54/89 (60%)
Query: 485 RRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQT 544
R+ AS P P L+ Q+ +LGE+L+PL+ + D A K+TGMLLEMD T
Sbjct: 573 RQGASATAPAPSDERLANLSQFDLATQKRVLGETLFPLIAATQADLAGKITGMLLEMDNT 632
Query: 545 EVLHLLESPEALKAKVAEAMEVLRSVAQQ 573
E+LHL+ P+AL KV EA+ VL++ Q
Sbjct: 633 ELLHLISVPDALAEKVQEAVTVLQTHGAQ 661
>gi|440797930|gb|ELR19004.1| polyadenylate-binding protein family protein [Acanthamoeba
castellanii str. Neff]
Length = 462
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 213/378 (56%), Positives = 286/378 (75%), Gaps = 6/378 (1%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+ + + + SLYVGDL+ VT++ L+++F VG V S+RVCRD TRRSLGY YVN+ N
Sbjct: 2 AANSPYQSASLYVGDLNPTVTEALLFEIFKAVGPVASIRVCRDAVTRRSLGYAYVNFHNV 61
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
DA RALD LN+T + + RIM+SHRDPSIRKSG GNIFIKNLDKSID+KAL+DTFS+F
Sbjct: 62 VDAERALDTLNYTLIKGRPCRIMWSHRDPSIRKSGQGNIFIKNLDKSIDNKALYDTFSAF 121
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ TDG G SKG+GFV +E E+A +AI K+NG ++N K V+VG F+ ++ER
Sbjct: 122 GNILSCKVVTDGKGNSKGYGFVHYETSEAADSAIAKVNGKMLNGKIVYVGRFIARKERTP 181
Query: 202 VAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADD 261
+ KF N+++KNL E+ T+EDLK+ FG +GT+ SAV+M+D + F FVNFE+ +
Sbjct: 182 GSDPEKFTNIYIKNLGEAYTEEDLKRDFGAFGTVQSAVLMKDPRDIGRQFAFVNFEDHEA 241
Query: 262 AAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGD 321
A +A E LNG+K D+E YVG+AQKKSERE L+ + +E K+QG+NLYIKNL D
Sbjct: 242 AHRATEELNGRKLGDKEVYVGRAQKKSERESFLR----KLREERAQKYQGINLYIKNLDD 297
Query: 322 SIDDEKLKELFSE--FGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
+++DE+L +LFS FG ITSCKVM D G S+G GFV ++ PE+AS+A++EMNGKM+ +
Sbjct: 298 TVNDEELHKLFSALPFGQITSCKVMSDDKGNSRGFGFVCYTNPEDASKAVSEMNGKMVAN 357
Query: 380 KPLYVAVAQRKEERRARL 397
KP+YVA+A+RK+ R A+L
Sbjct: 358 KPIYVALAERKDVRSAKL 375
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 46/60 (76%), Gaps = 2/60 (3%)
Query: 512 RTLLGESLYPLVEQLERDAAA-KVTGMLLE-MDQTEVLHLLESPEALKAKVAEAMEVLRS 569
+ ++GE+LYPLVE L K+TGMLLE MD TE+LHLL+SP+AL+ KV EA+ VL++
Sbjct: 389 KNIIGETLYPLVEALTSATQGPKITGMLLESMDVTELLHLLQSPDALREKVDEAVGVLKA 448
>gi|401409876|ref|XP_003884386.1| hypothetical protein NCLIV_047860 [Neospora caninum Liverpool]
gi|325118804|emb|CBZ54355.1| hypothetical protein NCLIV_047860 [Neospora caninum Liverpool]
Length = 763
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 222/425 (52%), Positives = 297/425 (69%), Gaps = 31/425 (7%)
Query: 15 PNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYG 74
PNG+ A AS F++ SLYVGDL +VT++ L+++F+ VG V S+RVCRD TRRSLGY
Sbjct: 69 PNGLNAAASAANFVSPSLYVGDLHQDVTEAMLFEVFNSVGPVTSIRVCRDTVTRRSLGYA 128
Query: 75 YVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKAL 134
YVNY DA R+LD LN+T + + RIM+ HRDPS+RKSG GNIF+KNLDK+ID+KAL
Sbjct: 129 YVNYQGIQDAERSLDTLNYTVIKGQPCRIMWCHRDPSLRKSGNGNIFVKNLDKNIDNKAL 188
Query: 135 HDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFL 194
+DTFS FGNILSCK+A D +G SKG+GFV +EN+ESA++AIDK+NGMLI K V+VG F+
Sbjct: 189 YDTFSLFGNILSCKVAVDENGHSKGYGFVHYENEESARSAIDKVNGMLIGGKTVYVGPFI 248
Query: 195 RKQERETVAIKTKFNNVFVKNLDESTTDE-DLKKIFGEYGTITSAVVMRDGDGKSKCFGF 253
R+ ER+ +A +TK+ NV++KN+ + DE L++ F +YG+ITS VV +D G + F F
Sbjct: 249 RRAERDNLA-ETKYTNVYIKNMPSAWEDEARLRETFAKYGSITSLVVRKDPKG--RLFAF 305
Query: 254 VNFENADDAAKAVEALNGKKFDD---------------------RE----WYVGKAQKKS 288
NF + D A AVEALNGK+ D RE +VG Q K+
Sbjct: 306 CNFADHDSAKAAVEALNGKRVTDAGAIKEGEDSGAEEKDEEGQKREGEQILFVGPHQSKA 365
Query: 289 EREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPS 348
R L+ +FEQ ++ D+FQG+NLYIKN+ DSIDDEKL++LF FG+ITS KVMRD
Sbjct: 366 HRSAMLRAKFEQMNQDRNDRFQGVNLYIKNMDDSIDDEKLRQLFEPFGSITSAKVMRDER 425
Query: 349 GISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFS--QMRP 406
G+S+ GFV F +PEEA++A+ EM+ K++ KPLYV +A+R+E+R RLQ +F +RP
Sbjct: 426 GVSRCFGFVCFMSPEEATKAVTEMHLKLVKGKPLYVGLAERREQRLMRLQQRFRLPSLRP 485
Query: 407 VAMGP 411
A P
Sbjct: 486 AAALP 490
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%)
Query: 508 PEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVL 567
P Q+ +LGE L+PL+ + + + A K+TGM+LEMD E+L LLES LKAKV EA+ VL
Sbjct: 700 PSMQKQMLGEKLFPLIARYQPELAGKITGMMLEMDNAELLILLESEAQLKAKVDEALRVL 759
Query: 568 RSVA 571
+ +
Sbjct: 760 QQAS 763
>gi|323355343|gb|EGA87168.1| Pab1p [Saccharomyces cerevisiae VL3]
Length = 563
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 246/541 (45%), Positives = 339/541 (62%), Gaps = 42/541 (7%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVGDL+ +V+++ LYD+FS +G V S+RVCRD T+ SLGY YVN+ + +A+
Sbjct: 37 SASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAI 96
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LN+TP+ + RIM+S RDPS+RK G+GNIFIKNL ID+KAL+DTFS FG+ILS K
Sbjct: 97 EQLNYTPIKGRLCRIMWSQRDPSLRKKGSGNIFIKNLHPDIDNKALYDTFSVFGDILSSK 156
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK- 207
IATD +G+SKGFGFV FE + +A+ AID LNGML+N ++++V L ++ER++ +TK
Sbjct: 157 IATDENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQLEETKA 216
Query: 208 -FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
+ N++VKN++ TTDE +++F ++G I SA + +D DGK K FGFVN+E +DA KAV
Sbjct: 217 HYTNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKLKGFGFVNYEKHEDAVKAV 276
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
EALN + + + YVG+AQKK+ER LK Q+E E + K+QG+NL++KNL DS+DDE
Sbjct: 277 EALNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDE 336
Query: 327 KLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 386
KL+E F+ +GTITS KVMR +G SKG GFV FSTPEEA++A+ E N +++ KPLYVA+
Sbjct: 337 KLEEEFAPYGTITSAKVMRTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAI 396
Query: 387 AQRKEERRARLQAQF---SQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPP 443
AQRK+ RR++L Q +QMR + P GQ P +
Sbjct: 397 AQRKDVRRSQLAQQIQARNQMRYQQATAAAAAAAAGMP------------GQFMPPMFYG 444
Query: 444 QMPPRGHAYRYPLGRNM--------QDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMP 495
MPPRG + P + M P G + VP G PR Q
Sbjct: 445 VMPPRGVPFNGPNPQQMNPMGGMPKNGMPPQFRNGPVYGVPPQ--GGFPRNANDNNQ--- 499
Query: 496 ITALSTALANASPEQQRTLLGESLYPLV--EQLERDAAAKVTGMLLEMDQTEVLHLLESP 553
++QR LGE LY V + +AA K+TGM+L++ EV LLES
Sbjct: 500 ----------FYQQKQRQALGEQLYKKVSAKTSNEEAAGKITGMILDLPPQEVFPLLESD 549
Query: 554 E 554
E
Sbjct: 550 E 550
>gi|405977322|gb|EKC41780.1| Polyadenylate-binding protein 4 [Crassostrea gigas]
Length = 646
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 233/410 (56%), Positives = 306/410 (74%), Gaps = 9/410 (2%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
+G + SLYVGDL +VT++ L++ FS G VLS+RVCRD+ TRRSLGY YVN+ PA
Sbjct: 9 AGPSYPMASLYVGDLHPDVTEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPA 68
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
DA RALD +NF + + IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+FG
Sbjct: 69 DAERALDTMNFDTIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFG 128
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER-ET 201
NILSCKI D G S+G+GFV FE +E+A+ AI+K+NGML+N K+VFVG F+ ++ER E
Sbjct: 129 NILSCKIVCDEHG-SRGYGFVHFETEEAARIAIEKVNGMLLNGKKVFVGRFMSRRERLEV 187
Query: 202 VAIKT-KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMR-DGDGKSKCFGFVNFENA 259
+ K KFNNV+VKN E DE L+ +F YG I SA VM DG GK K FGFV+FE+
Sbjct: 188 LGDKMRKFNNVYVKNFSEEINDETLRDMFEPYGKIISAKVMTDDGSGKGKGFGFVSFEDP 247
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+ A KAVEALNG + YVG+AQKK ER+ ELK +FE+ E ++++QG+NLY+KNL
Sbjct: 248 EAAEKAVEALNGNDNSGKILYVGRAQKKIERQAELKEKFERIRMERINRYQGVNLYVKNL 307
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D+IDDE+L++ F++FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++V+
Sbjct: 308 DDNIDDERLRKEFAQFGTITSAKVMTE-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVVA 366
Query: 380 KPLYVAVAQRKEERRARLQAQFSQMRPVAM---GPSVPPRMPMYPPGPSG 426
KPLYVA+AQRKE+R+A L +Q+ Q R +M G + M+ PG +G
Sbjct: 367 KPLYVALAQRKEDRKAHLASQYMQ-RITSMRMQGQQIGQVSQMFQPGSAG 415
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 58/75 (77%), Gaps = 2/75 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA T LA A P++Q+ +LGE L+PL+ + D A K+TGMLLE+D +E+LH+LES E
Sbjct: 560 PLTA--TMLATAPPQEQKQMLGERLFPLISTMFPDLAGKITGMLLEIDNSELLHMLESQE 617
Query: 555 ALKAKVAEAMEVLRS 569
+L+AKV EA+ VL++
Sbjct: 618 SLEAKVKEAVAVLQA 632
>gi|432865704|ref|XP_004070572.1| PREDICTED: embryonic polyadenylate-binding protein-like [Oryzias
latipes]
Length = 624
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 210/385 (54%), Positives = 291/385 (75%), Gaps = 6/385 (1%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
+ G + SLYVGDL +VT++ LY FS G ++S+RVCRD+ TRRSLGY Y+N+ P
Sbjct: 3 SGGPGYPLASLYVGDLHPDVTEAMLYQKFSPAGPIVSIRVCRDIITRRSLGYAYINFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA ALD +N+ + + IRIM+S RDP++RKSG GNIFIKN+D SID+KAL+DTFS+F
Sbjct: 63 ADAECALDTMNYDVIKGRPIRIMWSQRDPALRKSGVGNIFIKNIDDSIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D G SKG+GFV FE +E+A AI+ +NGML+ND++VFVGHF ++ERE
Sbjct: 123 GNILSCKVVCDERG-SKGYGFVHFETQEAANRAIETMNGMLLNDRKVFVGHFKSRKERE- 180
Query: 202 VAIKT---KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFEN 258
V T KF N+++KN ++ TDE LK+ F +G S VMRD G+S+ FGFVN+ +
Sbjct: 181 VEFGTKVMKFTNIYIKNFGDNLTDEKLKEAFSAFGKTLSVRVMRDEKGRSRGFGFVNYAH 240
Query: 259 ADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKN 318
+DA KAV+ +NGK+ + + YVG+AQK+ ER+ ELK +F+Q ++ + ++QG+NLY+KN
Sbjct: 241 HEDAQKAVDEMNGKEMNGKIIYVGRAQKRLERQGELKRKFDQLKQDRIQRYQGVNLYVKN 300
Query: 319 LGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIV 378
L DSIDDE+L++ FS +GTITS KVM + +G SKG GFV FS+PEEA++A+ EMNG+++
Sbjct: 301 LDDSIDDERLRKEFSPYGTITSAKVMTE-AGQSKGFGFVCFSSPEEATKAVTEMNGRIVA 359
Query: 379 SKPLYVAVAQRKEERRARLQAQFSQ 403
+KPLYVA+AQR+EER+A L ++ Q
Sbjct: 360 TKPLYVALAQRREERKAILTNKYMQ 384
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 169/291 (58%), Gaps = 23/291 (7%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ ++D ++ + LYD FS G +LS +V D R S GYG+V++ A RA++
Sbjct: 100 NIFIKNIDDSIDNKALYDTFSAFGNILSCKVVCD--ERGSKGYGFVHFETQEAANRAIET 157
Query: 91 LNFTPLNNKSIRI-MYSHRDPSIRKSGT-----GNIFIKNLDKSIDHKALHDTFSSFGNI 144
+N LN++ + + + R + GT NI+IKN ++ + L + FS+FG
Sbjct: 158 MNGMLLNDRKVFVGHFKSRKEREVEFGTKVMKFTNIYIKNFGDNLTDEKLKEAFSAFGKT 217
Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAI 204
LS ++ D G+S+GFGFV + + E AQ A+D++NG +N K ++VG ++ ER+ +
Sbjct: 218 LSVRVMRDEKGRSRGFGFVNYAHHEDAQKAVDEMNGKEMNGKIIYVGRAQKRLERQG-EL 276
Query: 205 KTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCF 251
K KF+ N++VKNLD+S DE L+K F YGTITSA VM + G+SK F
Sbjct: 277 KRKFDQLKQDRIQRYQGVNLYVKNLDDSIDDERLRKEFSPYGTITSAKVMTEA-GQSKGF 335
Query: 252 GFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAM 302
GFV F + ++A KAV +NG+ + YV AQ++ ER+ L ++ Q M
Sbjct: 336 GFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRREERKAILTNKYMQRM 386
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 101/289 (34%), Positives = 166/289 (57%), Gaps = 16/289 (5%)
Query: 118 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAID 176
++++ +L + L+ FS G I+S ++ D + +S G+ ++ F+ A+ A+D
Sbjct: 11 ASLYVGDLHPDVTEAMLYQKFSPAGPIVSIRVCRDIITRRSLGYAYINFQQPADAECALD 70
Query: 177 KLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTIT 236
+N +I + + + +R+ K+ N+F+KN+D+S ++ L F +G I
Sbjct: 71 TMNYDVIKGRPIRIMW----SQRDPALRKSGVGNIFIKNIDDSIDNKALYDTFSAFGNIL 126
Query: 237 SAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKG 296
S V+ D G SK +GFV+FE + A +A+E +NG +DR+ +VG + + ERE E
Sbjct: 127 SCKVVCDERG-SKGYGFVHFETQEAANRAIETMNGMLLNDRKVFVGHFKSRKEREVEFG- 184
Query: 297 QFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGF 356
+ MK T N+YIKN GD++ DEKLKE FS FG S +VMRD G S+G GF
Sbjct: 185 --TKVMKFT-------NIYIKNFGDNLTDEKLKEAFSAFGKTLSVRVMRDEKGRSRGFGF 235
Query: 357 VAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
V ++ E+A +A+ EMNGK + K +YV AQ++ ER+ L+ +F Q++
Sbjct: 236 VNYAHHEDAQKAVDEMNGKEMNGKIIYVGRAQKRLERQGELKRKFDQLK 284
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 58/77 (75%), Gaps = 2/77 (2%)
Query: 493 PMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLES 552
P P+TA + LA A P Q+ LLG+ LYPL+ + + A K+TGMLLE+D +E+LH+LES
Sbjct: 540 PEPLTA--SMLAAAPPMDQKQLLGDRLYPLILAQQPNLAGKITGMLLEIDNSELLHMLES 597
Query: 553 PEALKAKVAEAMEVLRS 569
PE+LK+KV EA+ VL++
Sbjct: 598 PESLKSKVDEAIAVLQA 614
>gi|367040559|ref|XP_003650660.1| hypothetical protein THITE_2110364 [Thielavia terrestris NRRL 8126]
gi|346997921|gb|AEO64324.1| hypothetical protein THITE_2110364 [Thielavia terrestris NRRL 8126]
Length = 777
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 225/478 (47%), Positives = 315/478 (65%), Gaps = 60/478 (12%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVG+LD +VT++ L++LFSQ+G V S+RVCRD TRRSLGY YVNY + D +AL
Sbjct: 63 SASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNSTQDGEKAL 122
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LN+T + + RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++FGNILSCK
Sbjct: 123 EELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCK 182
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKT 206
+A D +G SKG+GFV +E E+A AI +NGML+N+K+V+VG+ + K++R++ +K
Sbjct: 183 VAQDENGNSKGYGFVHYETDEAAAQAIKHVNGMLLNEKKVYVGYHIPKKDRQSKFEEMKA 242
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
F NV+VKN++ T+E+ +++F +YG +TS+ + RD +GKS+ FGFVNF AAKAV
Sbjct: 243 NFTNVYVKNINHEVTEEEFRELFAKYGEVTSSSLARDNEGKSRGFGFVNFTTHASAAKAV 302
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
E LNGK+F +E YVG+AQKK ERE+EL+ +E A E +K+QG+NLYIKNL D +DD+
Sbjct: 303 EELNGKEFRGQELYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLADDVDDD 362
Query: 327 KLKELFSEFGTITSCKVMRD-----PSGI------------------------------- 350
KL+++FSEFG ITS KVMRD P+G
Sbjct: 363 KLRQMFSEFGPITSAKVMRDAPPEPPAGSEGDKEGKDKENKKESEKEGEGEAAEKKTEKK 422
Query: 351 -------SKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQ 403
SKG GFV FS P++A++A+AEMN +M+ KPLYVA+AQRK+ R+++L+A
Sbjct: 423 VERKLGKSKGFGFVCFSNPDDATKAVAEMNQRMVDGKPLYVALAQRKDVRKSQLEASIQA 482
Query: 404 MRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPPQ----MPPRGHAYRYPLG 457
+ M + +GL QQ++ QAP P Q +PP G +P G
Sbjct: 483 RNQLRMQQAA---------AQAGLPQQYM--QAPVYYAPGQQPGFLPPGGRGMPFPQG 529
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 44/64 (68%)
Query: 511 QRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSV 570
Q+ +LGE+L+P ++ ++ + A K+TGMLLEMD E++HLLE AL AKV EAM V
Sbjct: 686 QKQILGENLFPKIQAIQPELAGKITGMLLEMDNNELVHLLEDEAALLAKVNEAMAVYDEY 745
Query: 571 AQQQ 574
+ Q
Sbjct: 746 VKSQ 749
>gi|82802755|gb|ABB92428.1| PABP3 [Pongo pygmaeus]
Length = 635
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 218/402 (54%), Positives = 289/402 (71%), Gaps = 4/402 (0%)
Query: 27 FLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAAR 86
+ T SLYVGDL +VT++ LY+ FS G +LS+RVCRDL TRRS Y YVN+ +P DA
Sbjct: 8 YPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRRSSNYAYVNFQHPKDAEH 67
Query: 87 ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
ALD +NF + K +RIM+S DPS+RKSG GNIF+KNLDKSI++KAL+DT S+FGNILS
Sbjct: 68 ALDTMNFDVIKGKPVRIMWSQHDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILS 127
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET-VAIK 205
CK+ D +G SKG+GFV FE E+A+ AI+K+NGML+ND++VFVG F ++ERE + K
Sbjct: 128 CKVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAK 186
Query: 206 TK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAK 264
K F NV++KN E DE LK +FG++G S VM D GKSK FGFV+FE +DA K
Sbjct: 187 AKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFEKHEDAQK 246
Query: 265 AVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSID 324
AV+ +NGK+ ++ YVG+AQKK ER+ ELK +FEQ ++ + ++Q +NLY+KNL D ID
Sbjct: 247 AVDEMNGKELSGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQVVNLYVKNLDDDID 306
Query: 325 DEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYV 384
DE+L++ FS FGTITS KVM + G S+G GFV FS+PEEA++A+ EMNG ++ +KPLYV
Sbjct: 307 DERLRKAFSPFGTITSAKVMME-GGRSRGFGFVCFSSPEEATKAVTEMNGIIVATKPLYV 365
Query: 385 AVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSG 426
++A RKEER+A L ++ Q P P P PSG
Sbjct: 366 SLAHRKEERQAYLTNEYMQRMAGVRAVPNPVINPYQPAPPSG 407
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 109/298 (36%), Positives = 176/298 (59%), Gaps = 16/298 (5%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATD-GSGQSKGFGFVQFEN 167
+PS T ++++ +L + L++ FS G ILS ++ D + +S + +V F++
Sbjct: 2 NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRRSSNYAYVNFQH 61
Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
+ A++A+D +N +I K V + + Q ++ K+ N+FVKNLD+S ++ L
Sbjct: 62 PKDAEHALDTMNFDVIKGKPVRI---MWSQHDPSLR-KSGVGNIFVKNLDKSINNKALYD 117
Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
+G I S V+ D +G SK +GFV+FE + A +A+E +NG +DR+ +VG+ + +
Sbjct: 118 TVSAFGNILSCKVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
ERE EL + ++ N+YIKN G+ +DDE+LK+LF +FG S KVM D
Sbjct: 177 KEREAELGAKAKEF----------PNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE 226
Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
SG SKG GFV+F E+A +A+ EMNGK + K +YV AQ+K ER+ L+ +F QM+
Sbjct: 227 SGKSKGFGFVSFEKHEDAQKAVDEMNGKELSGKQIYVGRAQKKVERQTELKRKFEQMK 284
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 61/83 (73%)
Query: 497 TALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEAL 556
T ++ LA+A P++Q+ +LGE L+PL+E + A K+TGMLLE+D +E+LH+LESPE+L
Sbjct: 544 TLTASMLASAPPQKQKQMLGERLFPLIEAMRPTLAGKITGMLLEIDNSELLHMLESPESL 603
Query: 557 KAKVAEAMEVLRSVAQQQANNPA 579
+KV EA+ VL++ ++A A
Sbjct: 604 GSKVDEAVAVLQAHQAKEATQKA 626
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
++ +LYV +LD ++ D +L FS G + S +V + RS G+G+V +++P +A
Sbjct: 289 TRYQVVNLYVKNLDDDIDDERLRKAFSPFGTITSAKVM--MEGGRSRGFGFVCFSSPEEA 346
Query: 85 ARALDVLNFTPLNNKSIRIMYSHR 108
+A+ +N + K + + +HR
Sbjct: 347 TKAVTEMNGIIVATKPLYVSLAHR 370
>gi|332030569|gb|EGI70257.1| Polyadenylate-binding protein 1 [Acromyrmex echinatior]
Length = 657
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 223/409 (54%), Positives = 298/409 (72%), Gaps = 30/409 (7%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPAD------- 83
SLYVG+L ++T++ L++ FS G VLS+RVCRD+ TRRSLGY YVN+ PAD
Sbjct: 12 SLYVGNLHTDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPADVVVVGDG 71
Query: 84 ---------------AARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKS 128
A RALD +NF + + IRIM+S RDPS+RKSG GN+FIKNLDK+
Sbjct: 72 GSGGGGCGSGSGSQRAERALDTMNFDIIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKN 131
Query: 129 IDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQV 188
ID+KA++DTFS+FGNILSCK+ D SG SKG+GFV FE +E+A +I+K+NGML+N K+V
Sbjct: 132 IDNKAMYDTFSAFGNILSCKVTQDESGASKGYGFVHFETEEAANKSIEKVNGMLLNGKKV 191
Query: 189 FVGHFLRKQERET-VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDG 246
+VG F+ ++ER+ + K K F NV+VKN E TD+ LK++F +YGTITS VM DG
Sbjct: 192 YVGKFIPRKERQKELGEKAKLFTNVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDG 251
Query: 247 KSKCFGFVNFENADDAAKAVEALNGKKF-DDREWYVGKAQKKSEREQELKGQFEQAMKET 305
KS+ FGFV FE+ + A +AV LNGK+ + + YVG+AQKK+ER+QELK +FEQ E
Sbjct: 252 KSRGFGFVAFEDPNSAEQAVLDLNGKEIAEGKCMYVGRAQKKAERQQELKRKFEQLKIER 311
Query: 306 VDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEA 365
++++QG+NLY+KNL D+IDDE+L++ F+ FGTITS KVM + G SKG GFV FS PEEA
Sbjct: 312 LNRYQGVNLYVKNLDDTIDDERLRKEFTPFGTITSAKVMME-EGRSKGFGFVCFSQPEEA 370
Query: 366 SRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQ----MRPVAMG 410
++A+ EMNG+++ SKPLYVA+AQRKE+R+A L +Q+ Q MR MG
Sbjct: 371 TKAVTEMNGRIVGSKPLYVALAQRKEDRKAHLASQYMQRMANMRMQQMG 419
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 104/196 (53%), Gaps = 31/196 (15%)
Query: 28 LTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRV-CRDLSTRRSLGYGYVNYANPADAAR 86
L T++YV + ++TD +L ++F + G + S +V +D +S G+G+V + +P A +
Sbjct: 212 LFTNVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMIKD--DGKSRGFGFVAFEDPNSAEQ 269
Query: 87 ALDVLNFTPLNNKSI---RIMY-------SHRDPSIRKSGTG------------NIFIKN 124
A VL+ LN K I + MY + R +++ N+++KN
Sbjct: 270 A--VLD---LNGKEIAEGKCMYVGRAQKKAERQQELKRKFEQLKIERLNRYQGVNLYVKN 324
Query: 125 LDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLIN 184
LD +ID + L F+ FG I S K+ + G+SKGFGFV F E A A+ ++NG ++
Sbjct: 325 LDDTIDDERLRKEFTPFGTITSAKVMME-EGRSKGFGFVCFSQPEEATKAVTEMNGRIVG 383
Query: 185 DKQVFVGHFLRKQERE 200
K ++V RK++R+
Sbjct: 384 SKPLYVALAQRKEDRK 399
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A P++Q+ +LGE L+PL+ + K+TGMLLE+D +E+LH+LE E
Sbjct: 573 PLTA--SMLAAAPPQEQKQMLGERLFPLIHDMNPQLTGKITGMLLEIDNSELLHMLEHKE 630
Query: 555 ALKAKVAEAMEVLRSVAQQQANNP 578
+LKAKV EA+ VL++ +QA P
Sbjct: 631 SLKAKVDEAVAVLQAHQAKQAVAP 654
Score = 46.2 bits (108), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
N++ +LYV +LD + D +L F+ G + S +V + RS G+G+V ++ P +A
Sbjct: 313 NRYQGVNLYVKNLDDTIDDERLRKEFTPFGTITSAKVM--MEEGRSKGFGFVCFSQPEEA 370
Query: 85 ARALDVLNFTPLNNKSIRIMYSHR 108
+A+ +N + +K + + + R
Sbjct: 371 TKAVTEMNGRIVGSKPLYVALAQR 394
>gi|452820609|gb|EME27649.1| poly(A) binding / translation initiation factor [Galdieria
sulphuraria]
Length = 784
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 223/423 (52%), Positives = 297/423 (70%), Gaps = 15/423 (3%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ ++YVGDL V ++ L+++FS +G V SVRVCRD+ TRRSLGY YVN+ + DA RAL
Sbjct: 76 SATIYVGDLHPEVNEANLFEVFSAIGPVASVRVCRDIVTRRSLGYAYVNFHSMDDAERAL 135
Query: 89 DVLNFTPL---NNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNIL 145
+ +NF +K +R+M+ +RDP+IRKSG GN+FIKNLDK+ID+K L DTFS FGNIL
Sbjct: 136 ETMNFYACPQTRDKPMRLMWKNRDPTIRKSGAGNVFIKNLDKAIDNKTLFDTFSVFGNIL 195
Query: 146 SCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIK 205
SCK+ATD G S G+GFV FEN E A+ AI+K+NGML+NDKQV+VG+F +QERE
Sbjct: 196 SCKVATDDEGNSLGYGFVHFENPEDAETAINKVNGMLLNDKQVYVGYFKSRQEREASEET 255
Query: 206 TKFNNVFVKNLDES-TTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAK 264
F NV+ KNL S T+E ++++F YG ITS V D + K F FVNF + AAK
Sbjct: 256 HIFTNVYTKNLIPSMCTEEKIRELFSLYGEITSVYVPVDENEVPKGFAFVNFAKPECAAK 315
Query: 265 AVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSID 324
AVE LNG+ F+ + YVG+AQKK+ERE EL+ + E E + K+QG+NLY++NL D +D
Sbjct: 316 AVEELNGRDFEGKSLYVGRAQKKAEREAELRRKAENKRAEILKKYQGVNLYVRNLPDDMD 375
Query: 325 DEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYV 384
+E L++ FS FGT+TSC+VMRD G+S+G GFV FSTPEEA++A+ EMNGKM+ KPLYV
Sbjct: 376 EEGLRKEFSNFGTLTSCRVMRDDKGVSRGFGFVCFSTPEEATKAVTEMNGKMMGKKPLYV 435
Query: 385 AVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMP--MYPPGPSGLGQQFLYGQAPPAIIP 442
+AQRKE R+A+L+AQ ++ A G +P +P +YP G Y P +P
Sbjct: 436 CLAQRKEIRQAQLEAQ--RIAAAAGGLRIPGAVPGSLYP----QPGAPMFY---PQPGVP 486
Query: 443 PQM 445
PQM
Sbjct: 487 PQM 489
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/129 (43%), Positives = 77/129 (59%), Gaps = 9/129 (6%)
Query: 455 PLGRNMQDFPFDMGAGSMLPV-------PVDMGAGIPRRDASVGQPMPITALS--TALAN 505
P+ N Q F + M A + PV P DM ++ + ++ S L N
Sbjct: 645 PMQLNGQQFKYTMNARNAAPVMNQERVNPEDMSQEQRQQQQARQADNATSSASLIALLTN 704
Query: 506 ASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAME 565
ASPEQQ+ +LGE LYPL+ + + A K+TGMLLEMD +EVLHL+ESP+AL K+ EA+
Sbjct: 705 ASPEQQKQILGERLYPLIYERQPGLAGKITGMLLEMDNSEVLHLIESPDALSEKIEEALA 764
Query: 566 VLRSVAQQQ 574
VLR+ A+QQ
Sbjct: 765 VLRAHAEQQ 773
>gi|195429537|ref|XP_002062815.1| GK19652 [Drosophila willistoni]
gi|194158900|gb|EDW73801.1| GK19652 [Drosophila willistoni]
Length = 638
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 217/374 (58%), Positives = 280/374 (74%), Gaps = 3/374 (0%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL ++ ++ L++ FS G VLS+RVCRD+ TRRSLGY YVN+ PADA RALD
Sbjct: 3 SLYVGDLHQDINEAGLFEKFSSAGPVLSIRVCRDVVTRRSLGYAYVNFQQPADAERALDT 62
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF + NK IRIM+S RDPS+R+SG GN+FIKNLD+ ID+KA++DTFS+FGNILSCK+A
Sbjct: 63 MNFDLIRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDRQIDNKAIYDTFSAFGNILSCKVA 122
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET-VAIKTK-F 208
D G SKG+GFV FE +E+A +I+K+NGML+N K+V+VG F+ ++ERE + K K F
Sbjct: 123 LDEKGNSKGYGFVHFETEEAANTSIEKVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLF 182
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NV+VKN E DE LK F YG ITS VM DGKSK FGFV FE + A AV+A
Sbjct: 183 TNVYVKNFTEEFDDEKLKDFFEPYGKITSYKVMSKEDGKSKGFGFVAFETTEAAEAAVQA 242
Query: 269 LNGKKF-DDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEK 327
LNGK + + YV +AQKK+ER+QELK +FE+ K+ + G+NLY+KNL DSIDDE+
Sbjct: 243 LNGKDMGEGKSLYVARAQKKAERQQELKRKFEELKKKRHESVFGVNLYVKNLDDSIDDER 302
Query: 328 LKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 387
L++ FS +GTITS KVM D G SKG GFV F +P EA+ A+ E+NG+++ SKPLYVA+A
Sbjct: 303 LRKEFSLYGTITSAKVMTDEEGRSKGFGFVCFISPNEATCAVTELNGRVVGSKPLYVALA 362
Query: 388 QRKEERRARLQAQF 401
QRKEER+A L +Q+
Sbjct: 363 QRKEERKAHLASQY 376
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 96/190 (50%), Gaps = 18/190 (9%)
Query: 28 LTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARA 87
L T++YV + D +L D F G++ S +V +S G+G+V + A A
Sbjct: 181 LFTNVYVKNFTEEFDDEKLKDFFEPYGKITSYKVMSK-EDGKSKGFGFVAFETTEAAEAA 239
Query: 88 LDVLNFTPL-NNKSIRIMYSH----RDPSIRK-----------SGTG-NIFIKNLDKSID 130
+ LN + KS+ + + R +++ S G N+++KNLD SID
Sbjct: 240 VQALNGKDMGEGKSLYVARAQKKAERQQELKRKFEELKKKRHESVFGVNLYVKNLDDSID 299
Query: 131 HKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFV 190
+ L FS +G I S K+ TD G+SKGFGFV F + A A+ +LNG ++ K ++V
Sbjct: 300 DERLRKEFSLYGTITSAKVMTDEEGRSKGFGFVCFISPNEATCAVTELNGRVVGSKPLYV 359
Query: 191 GHFLRKQERE 200
RK+ER+
Sbjct: 360 ALAQRKEERK 369
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 57/74 (77%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P +++ LANA P++Q+ +LGE LYPL+E++ A K+TGMLLE++ +E+LH+LE E
Sbjct: 556 PEKLIASLLANAKPQEQKQILGERLYPLIERMHATLAGKITGMLLEIENSELLHMLEDQE 615
Query: 555 ALKAKVAEAMEVLR 568
ALKAKV EA+ VL+
Sbjct: 616 ALKAKVEEAVAVLQ 629
>gi|223590120|sp|A5DM21.2|PABP_PICGU RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|190347872|gb|EDK40224.2| hypothetical protein PGUG_04322 [Meyerozyma guilliermondii ATCC
6260]
Length = 631
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 255/571 (44%), Positives = 360/571 (63%), Gaps = 50/571 (8%)
Query: 32 LYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVL 91
LYVG+L+ +V ++ L+++FS +GQV S+RVCRD T++SLGY YVN+ AD +RA++ L
Sbjct: 60 LYVGELNPSVNEALLFEIFSPIGQVSSIRVCRDAVTKKSLGYAYVNFHKHADGSRAIEEL 119
Query: 92 NFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIAT 151
N++ ++ + RIM+S RDPS+R++G GNIFIKNL +ID+KALHDTFS+FG ILSCK+AT
Sbjct: 120 NYSLVDGRPCRIMWSQRDPSLRRNGDGNIFIKNLHPAIDNKALHDTFSAFGRILSCKVAT 179
Query: 152 DGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTKFN 209
D GQSK FGFV +E E+A+ AI+ +NGML+ND++VFVG + K++RE+ +K F
Sbjct: 180 DELGQSKCFGFVHYETAEAAEAAIENVNGMLLNDREVFVGKHVSKRDRESKFEEMKANFT 239
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEAL 269
NV+VKNL + ++IF +G +TS + D +GKS+ FGFVNFEN + A AV+ +
Sbjct: 240 NVYVKNLAPEVDNAKFEEIFKPFGPVTSVHLETDQEGKSRGFGFVNFENHESALNAVKEM 299
Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLK 329
N K+ D ++ YVG+AQKK ER ELK +E E + K+QG+NL++KNL DSID EKL+
Sbjct: 300 NDKEIDGQKLYVGRAQKKRERLDELKRLYESTRLEKLSKYQGVNLFVKNLDDSIDSEKLE 359
Query: 330 ELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQR 389
E F FGTITS +VM D +G SKG GFV FS+PEEA++A+ EMN +MI KPLYVA+AQR
Sbjct: 360 EEFKPFGTITSARVMVDDAGKSKGFGFVCFSSPEEATKAITEMNQRMIQGKPLYVALAQR 419
Query: 390 KEERRARLQAQFS-----QMRPVAMGPSVPPRM--PM--------YPPGPSGLGQQFLYG 434
K+ RR++L+ Q +M+ A +P + PM +PP G Q G
Sbjct: 420 KDVRRSQLEQQIQARNQMRMQNAAAAAGMPGQFMSPMFYGQQPGFFPPNGRGGAQ----G 475
Query: 435 QAPPAIIPPQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPV----PV------------- 477
PP P M PRG P G+ +P G +PV PV
Sbjct: 476 PFPPN--PQMMMPRGGQMPPPQGQ----WPRAGPNGQPVPVYGMPPVYGGEFNGPNGQRQ 529
Query: 478 DMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLV----EQLERDAAAK 533
GA P R+ G+P L+ ++ +QQ+ +LGE LYP + + E +AA K
Sbjct: 530 QRGAYPPNRNQKGGRPQ--RDLAAIISTVPVDQQKRILGEELYPKIVATGKAQEPEAAGK 587
Query: 534 VTGMLLEMDQTEVLHLLESPEALKAKVAEAM 564
+TGM+L+++ E+L LLE E + +A+
Sbjct: 588 ITGMMLDLENEEILALLEDDELFENHFEDAL 618
>gi|17136378|ref|NP_476667.1| polyA-binding protein, isoform A [Drosophila melanogaster]
gi|24654793|ref|NP_725749.1| polyA-binding protein, isoform B [Drosophila melanogaster]
gi|24654797|ref|NP_725750.1| polyA-binding protein, isoform C [Drosophila melanogaster]
gi|195335482|ref|XP_002034394.1| GM21847 [Drosophila sechellia]
gi|76803808|sp|P21187.3|PABP_DROME RecName: Full=Polyadenylate-binding protein; Short=PABP;
Short=Poly(A)-binding protein
gi|7302665|gb|AAF57745.1| polyA-binding protein, isoform B [Drosophila melanogaster]
gi|7302666|gb|AAF57746.1| polyA-binding protein, isoform C [Drosophila melanogaster]
gi|21428474|gb|AAM49897.1| LD24412p [Drosophila melanogaster]
gi|21626472|gb|AAM68175.1| polyA-binding protein, isoform A [Drosophila melanogaster]
gi|194126364|gb|EDW48407.1| GM21847 [Drosophila sechellia]
gi|220946756|gb|ACL85921.1| pAbp-PA [synthetic construct]
Length = 634
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 229/431 (53%), Positives = 297/431 (68%), Gaps = 14/431 (3%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL +V +S L+D FS G VLS+RVCRD+ TRRSLGY YVN+ PADA RALD
Sbjct: 3 SLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALDT 62
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF + NK IRIM+S RDPS+R+SG GN+FIKNLD++ID+KA++DTFS+FGNILSCK+A
Sbjct: 63 MNFDLVRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDRAIDNKAIYDTFSAFGNILSCKVA 122
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET-VAIKTK-F 208
TD G SKG+GFV FE +E+A +IDK+NGML+N K+V+VG F+ ++ERE + K K F
Sbjct: 123 TDEKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLF 182
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NV+VKN E DE LK+ F YG ITS VM DGKSK FGFV FE + A AV+A
Sbjct: 183 TNVYVKNFTEDFDDEKLKEFFEPYGKITSYKVMSKEDGKSKGFGFVAFETTEAAEAAVQA 242
Query: 269 LNGKKF-DDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEK 327
LNGK + + YV +AQKK+ER+QELK +FE+ ++ + G+NLY+KNL D+IDD++
Sbjct: 243 LNGKDMGEGKSLYVARAQKKAERQQELKRKFEELKQKRHESVFGVNLYVKNLDDTIDDDR 302
Query: 328 LKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 387
L+ FS +G ITS KVM D G SKG GFV F+ EA+ A+ E+NG+++ SKPLYVA+A
Sbjct: 303 LRIAFSPYGNITSAKVMTDEEGRSKGFGFVCFNAASEATCAVTELNGRVVGSKPLYVALA 362
Query: 388 QRKEERRARLQAQF----SQMRPVAMGPSVPPR------MPMYPPGPSGLGQQFLYG-QA 436
QRKEER+A L +Q+ + MR +G P +P P G Q +
Sbjct: 363 QRKEERKAHLASQYMRHMTGMRMQQLGQIYQPNAASGFFVPTLPSNQRFFGSQVATQMRN 422
Query: 437 PPAIIPPQMPP 447
P +P PP
Sbjct: 423 TPRWVPQVRPP 433
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 56/70 (80%)
Query: 499 LSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKA 558
+++ LANA P++Q+ +LGE LYP++E + + A K+TGMLLE++ +E+LH++E EALKA
Sbjct: 556 IASLLANAKPQEQKQILGERLYPMIEHMHANLAGKITGMLLEIENSELLHMIEDQEALKA 615
Query: 559 KVAEAMEVLR 568
KV EA+ VL+
Sbjct: 616 KVEEAVAVLQ 625
>gi|261199248|ref|XP_002626025.1| polyadenylate-binding protein [Ajellomyces dermatitidis SLH14081]
gi|239594233|gb|EEQ76814.1| polyadenylate-binding protein [Ajellomyces dermatitidis SLH14081]
Length = 783
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 237/499 (47%), Positives = 312/499 (62%), Gaps = 73/499 (14%)
Query: 15 PNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYG 74
PN +A S Q + SLYVG+LD +VT++ L++LFS +GQV S+RVCRD TRRSLGY
Sbjct: 42 PN--SAAPSTTQPHSASLYVGELDSSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYA 99
Query: 75 YVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKAL 134
YVNY N AD RAL+ LN+T + K RIM+S RDP++RK+G GN+FIKNLD +ID+KAL
Sbjct: 100 YVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKAL 159
Query: 135 HDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFL 194
HDTF++FGNILSCK+A D G SKG+GFV +E E+A NAI +NGML+N+K+VFVGH +
Sbjct: 160 HDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHI 219
Query: 195 RKQERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGD-GKSKCF 251
K++R++ +K F NV+VKNLD T+E+ +++FG+YG ITSA + D + GKS+ F
Sbjct: 220 AKKDRQSKFEEMKANFTNVYVKNLDTKVTNEEFRELFGKYGDITSASITHDSETGKSRGF 279
Query: 252 GFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQG 311
GFVNF + AA AVE LN K+F ++ YVG+AQKK ERE+EL+ Q E A E K+QG
Sbjct: 280 GFVNFVKHESAAAAVEELNDKEFKGQKLYVGRAQKKHEREEELRKQHEAARVEKASKYQG 339
Query: 312 LNLYIKNLGDSIDDEKLKELFSEFGTITSC------------------------------ 341
+NLY+KNL D IDDEKL++LF FG ITS
Sbjct: 340 VNLYVKNLTDDIDDEKLRDLFIGFGNITSARVMRDTIADAGSESEKEKEISNKENVKEEA 399
Query: 342 ----------------------KVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
K + G SKG GFV FS P+EAS+A+ EMN +M+
Sbjct: 400 KKESAEEESSDKSDKAEKSDSKKTLEKKLGKSKGFGFVCFSNPDEASKAVTEMNQRMVNG 459
Query: 380 KPLYVAVAQRKEERRARLQAQF-------SQMRPVAMGPSVPPRMP--MYPPG-----PS 425
KPLYVA+AQRK+ R+++L+A Q A G S P P YPPG P+
Sbjct: 460 KPLYVALAQRKDVRKSQLEASIQARNTIRQQQVAAAAGMSQPFMQPAVYYPPGQQGFIPT 519
Query: 426 GLGQQ--FLYGQAPPAIIP 442
GQ+ +GQ P ++P
Sbjct: 520 NAGQRGGMAFGQQPGMVLP 538
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 79/154 (51%), Gaps = 28/154 (18%)
Query: 413 VPPRMPMYPPGPSGLGQQFLYGQAPPAIIPPQMPPRGHAYRYPLGRNMQDFPFDMGAGSM 472
+PP M PG GQ F G+ +PPQ +G A GR GAG
Sbjct: 623 MPPSM-GNAPGMRAGGQAFTQGRG----MPPQ---QGVARPGQAGR---------GAGP- 664
Query: 473 LPVPVDMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAA 532
G+P RD S G P T AL+ A P QQ+ +LGE++YP ++ + + A
Sbjct: 665 -------AQGMPPRDESAGGP---TLNLQALSAAPPAQQKQMLGEAIYPKIQAQQPELAG 714
Query: 533 KVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEV 566
K+TGMLLEMD E+L L++ AL+AKV EA+ V
Sbjct: 715 KITGMLLEMDNAELLSLVDDEAALRAKVDEAINV 748
>gi|239615396|gb|EEQ92383.1| polyadenylate-binding protein [Ajellomyces dermatitidis ER-3]
gi|327356743|gb|EGE85600.1| polyadenylate-binding protein [Ajellomyces dermatitidis ATCC 18188]
Length = 783
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 237/499 (47%), Positives = 312/499 (62%), Gaps = 73/499 (14%)
Query: 15 PNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYG 74
PN +A S Q + SLYVG+LD +VT++ L++LFS +GQV S+RVCRD TRRSLGY
Sbjct: 42 PN--SAAPSTTQPHSASLYVGELDSSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYA 99
Query: 75 YVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKAL 134
YVNY N AD RAL+ LN+T + K RIM+S RDP++RK+G GN+FIKNLD +ID+KAL
Sbjct: 100 YVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKAL 159
Query: 135 HDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFL 194
HDTF++FGNILSCK+A D G SKG+GFV +E E+A NAI +NGML+N+K+VFVGH +
Sbjct: 160 HDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHI 219
Query: 195 RKQERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGD-GKSKCF 251
K++R++ +K F NV+VKNLD T+E+ +++FG+YG ITSA + D + GKS+ F
Sbjct: 220 AKKDRQSKFEEMKANFTNVYVKNLDTEVTNEEFRELFGKYGDITSASITHDSETGKSRGF 279
Query: 252 GFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQG 311
GFVNF + AA AVE LN K+F ++ YVG+AQKK ERE+EL+ Q E A E K+QG
Sbjct: 280 GFVNFVKHESAAAAVEELNDKEFKGQKLYVGRAQKKHEREEELRKQHEAARVEKASKYQG 339
Query: 312 LNLYIKNLGDSIDDEKLKELFSEFGTITSC------------------------------ 341
+NLY+KNL D IDDEKL++LF FG ITS
Sbjct: 340 VNLYVKNLTDDIDDEKLRDLFIGFGNITSARVMRDTIADAGSESEKEKEISNKENVKEEA 399
Query: 342 ----------------------KVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
K + G SKG GFV FS P+EAS+A+ EMN +M+
Sbjct: 400 KKESAEEESSDKSDKAEKSDSKKTLEKKLGKSKGFGFVCFSNPDEASKAVTEMNQRMVNG 459
Query: 380 KPLYVAVAQRKEERRARLQAQF-------SQMRPVAMGPSVPPRMP--MYPPG-----PS 425
KPLYVA+AQRK+ R+++L+A Q A G S P P YPPG P+
Sbjct: 460 KPLYVALAQRKDVRKSQLEASIQARNTIRQQQVAAAAGMSQPFMQPAVYYPPGQQGFIPA 519
Query: 426 GLGQQ--FLYGQAPPAIIP 442
GQ+ +GQ P ++P
Sbjct: 520 NAGQRGGMAFGQQPGMVLP 538
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 79/154 (51%), Gaps = 28/154 (18%)
Query: 413 VPPRMPMYPPGPSGLGQQFLYGQAPPAIIPPQMPPRGHAYRYPLGRNMQDFPFDMGAGSM 472
+PP M PG GQ F G+ +PPQ +G A GR GAG
Sbjct: 623 MPPSM-GNAPGMRAGGQAFTQGRG----MPPQ---QGVARPGQAGR---------GAGP- 664
Query: 473 LPVPVDMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAA 532
G+P RD S G P T AL+ A P QQ+ +LGE++YP ++ + + A
Sbjct: 665 -------AQGMPPRDESAGGP---TLNLQALSAAPPAQQKQMLGEAIYPKIQAQQPELAG 714
Query: 533 KVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEV 566
K+TGMLLEMD E+L L++ AL+AKV EA+ V
Sbjct: 715 KITGMLLEMDNAELLSLVDDEAALRAKVDEAINV 748
>gi|294892363|ref|XP_002774026.1| Polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
gi|239879230|gb|EER05842.1| Polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
Length = 636
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 263/614 (42%), Positives = 364/614 (59%), Gaps = 89/614 (14%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL +VT++ LY++F+ VG V S+RVCRD TRRSLGY YVN+ N ADA RALD
Sbjct: 35 SLYVGDLKPDVTEAMLYEVFNGVGPVASIRVCRDSVTRRSLGYAYVNFHNVADAERALDT 94
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
LN++P+ K RIM+SHRDP++RK+G N+F+KNLDK+ID+KAL+DTFS FGNILSCK+A
Sbjct: 95 LNYSPIRGKQCRIMWSHRDPTLRKAGNANVFVKNLDKTIDNKALYDTFSLFGNILSCKVA 154
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER--ETVAIKTKF 208
TD G+S+G+GFV FEN ESA AI KLNGM+I +K V+VG F + ER + KF
Sbjct: 155 TDDDGKSRGYGFVHFENDESAHKAITKLNGMMIGEKAVYVGPFQKHAERAEQHGDEPRKF 214
Query: 209 NNVFVKNLDES-TTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVE 267
NV++K+L ES TT+ED++K F E+G ITS + D G+ F FVN+E+ D AAKAVE
Sbjct: 215 TNVYIKHLPESWTTEEDVQKAFEEFGKITSVAIQTDRKGRR--FAFVNYEDFDSAAKAVE 272
Query: 268 ALNGKKFDDRE-----------------------WYVGKAQKKSEREQELKGQFEQAMKE 304
A+NGK +E YV +AQ K+ER EL+ +F+ E
Sbjct: 273 AMNGKDMRTQEEIDAGKGEEESTEEGSDEMPEYKLYVTRAQTKTERSAELRNKFQAKNTE 332
Query: 305 TVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP-SGISKGSGFVAFSTPE 363
V Q NLY+KNL + +DDEKL+++F +FG ITS KVM D +G+S+G GFV F+
Sbjct: 333 KVGN-QSCNLYVKNLPEDVDDEKLRQMFEQFGEITSPKVMVDENTGVSRGFGFVCFANQA 391
Query: 364 EASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVA---------MGP--- 411
+ +A+ M+ K+ KPL+VAVA++++ R RLQ ++ P+ GP
Sbjct: 392 DGEKAIQAMHLKLYGGKPLFVAVAEKRDARIERLQQRYRAGIPMGGFQQNYQGYRGPRNF 451
Query: 412 SVPPRMPMYPPGPSG--------------------LGQQ---FLYGQAP---------PA 439
+ P PMY G +G Q + G P P
Sbjct: 452 NAPNPSPMYYSGGQNRQGGMMQGPPGGFVGGPRGPMGAQRGPMMSGGYPVNRGPRPTGPN 511
Query: 440 IIPPQMPPRGH---AYRYPLGRNMQDFPFDMGAGSMLP--VPVDMGAGIPRRDASVGQPM 494
++P PPRG+ R+P Q PF G M P +P +P ++ P
Sbjct: 512 MMPMNQPPRGNFPPQQRFP---GQQGGPFMGQQGGMPPRMMPEQHNMPMPHQN-----PP 563
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA ALA+A P Q+ +LGE L+ L+ + + A K+TGM+LEMD +E+L L++S +
Sbjct: 564 PMTA--AALASAPPGLQKQMLGERLFTLISKYQPTLAGKITGMMLEMDNSELLMLIDSDQ 621
Query: 555 ALKAKVAEAMEVLR 568
L+ K+ EA+ VL+
Sbjct: 622 QLRMKIDEAVRVLQ 635
>gi|170579093|ref|XP_001894673.1| polyadenylate-binding protein 1 [Brugia malayi]
gi|158598601|gb|EDP36463.1| polyadenylate-binding protein 1, putative [Brugia malayi]
Length = 655
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 220/403 (54%), Positives = 289/403 (71%), Gaps = 7/403 (1%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL +VT++ L++ FS G VLS+RVCRD TRRSLGY YVN+ PADA RALD
Sbjct: 19 SLYVGDLHPDVTEAMLFEKFSSAGPVLSIRVCRDAITRRSLGYAYVNFQQPADAERALDT 78
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF + K IRIM+S RDPS+R+SG GNIFIKNLDKSID+KA++DTFS FGNILSCK+A
Sbjct: 79 MNFDMMYGKPIRIMWSQRDPSMRRSGAGNIFIKNLDKSIDNKAIYDTFSMFGNILSCKVA 138
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQE--RETVAIKTKF 208
D SKG+GFV FE +ESAQ AI+K+NGML+ K+V+VG F + RE +F
Sbjct: 139 NDEESNSKGYGFVHFETEESAQKAIEKVNGMLLEGKKVYVGKFQPRTARLREMGETARRF 198
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NV++KN + E L+K+F ++G ITSA VM D DGKSK FGFV FEN +DA KAV
Sbjct: 199 TNVYIKNFADELDKEALEKLFSKFGKITSAAVMVDADGKSKGFGFVAFENPEDAEKAVTE 258
Query: 269 LNGKKF--DDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
++ + +R+ YV +AQKK+ER ELK ++EQ E + ++QG+NLY+KNL D+++D+
Sbjct: 259 MHEYELPGTERKLYVCRAQKKNERSAELKRRYEQQKVERMQRYQGVNLYVKNLDDTVNDD 318
Query: 327 KLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 386
LK+ F +G ITS KVM D +G SKG GFV F P+EA++A+ EMNGKM+ +KPLYVA+
Sbjct: 319 ILKQNFEAYGKITSAKVMCDDNGRSKGFGFVCFEKPDEATKAVTEMNGKMMCTKPLYVAL 378
Query: 387 AQRKEERRARLQAQFSQMRPVAMGPSVPPRMP--MYPPGPSGL 427
AQRKE+R+A+L +Q+ Q R ++ MP +Y PG G
Sbjct: 379 AQRKEDRKAQLASQYMQ-RLASIRMHNAGSMPGTVYTPGTGGF 420
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 98/190 (51%), Gaps = 21/190 (11%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
T++Y+ + + L LFS+ G++ S V D + +S G+G+V + NP DA +A+
Sbjct: 199 TNVYIKNFADELDKEALEKLFSKFGKITSAAVMVD-ADGKSKGFGFVAFENPEDAEKAVT 257
Query: 90 VLNFTPL---------------NNKSIRIMYSHRDPSI----RKSGTGNIFIKNLDKSID 130
++ L N +S + + + R G N+++KNLD +++
Sbjct: 258 EMHEYELPGTERKLYVCRAQKKNERSAELKRRYEQQKVERMQRYQGV-NLYVKNLDDTVN 316
Query: 131 HKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFV 190
L F ++G I S K+ D +G+SKGFGFV FE + A A+ ++NG ++ K ++V
Sbjct: 317 DDILKQNFEAYGKITSAKVMCDDNGRSKGFGFVCFEKPDEATKAVTEMNGKMMCTKPLYV 376
Query: 191 GHFLRKQERE 200
RK++R+
Sbjct: 377 ALAQRKEDRK 386
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 56/80 (70%), Gaps = 3/80 (3%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDA-AAKVTGMLLEMDQTEVLHLLESP 553
P+TA LA A P++Q+ +LGE +YPL+E++ + K+TGM+LEMD +E+L +LE+
Sbjct: 576 PLTA--HMLAQALPQEQKQMLGERIYPLIERIYQGPDVGKITGMMLEMDNSELLMMLENE 633
Query: 554 EALKAKVAEAMEVLRSVAQQ 573
E L++KV+EA VL S Q
Sbjct: 634 ELLQSKVSEAASVLASSKSQ 653
>gi|326474523|gb|EGD98532.1| polyadenylate-binding protein [Trichophyton tonsurans CBS 112818]
Length = 676
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 262/645 (40%), Positives = 371/645 (57%), Gaps = 103/645 (15%)
Query: 16 NGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGY 75
+G A A+ +Q + SLYVG+LD +VT++ LY+LFS +GQV S+RVCRD TRRSLGY Y
Sbjct: 45 SGTTAPAT-SQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAY 103
Query: 76 VNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALH 135
VNY N AD RAL+ LN+T + + RIM+S RDP++RK+G GN+FIKNLD +ID+KALH
Sbjct: 104 VNYNNTADGERALEDLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALH 163
Query: 136 DTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLR 195
DTF++FGNILSCK+A D G SKG+GFV +E E+A NAI +NGML+N+K+VFVGH +
Sbjct: 164 DTFAAFGNILSCKVAQDEYGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIA 223
Query: 196 KQERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGD-GKSKCFG 252
K++R++ +K F N++VKN+++ TDE+ + +F +YG ITSA + RD + GKS+ FG
Sbjct: 224 KKDRQSKFEEMKANFTNIYVKNVEQDVTDEEFRGLFEKYGEITSATLSRDNETGKSRGFG 283
Query: 253 FVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGL 312
FVNF + + A+ AVEALN + ++ YVG+AQKK ERE+EL+ Q+E A E K+QG+
Sbjct: 284 FVNFSDHEAASAAVEALNEYELKGQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQGV 343
Query: 313 NLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP----------------------SGI 350
NLYIKNL D IDDEKL+ELFS +G ITS KVMR+ +G
Sbjct: 344 NLYIKNLSDDIDDEKLRELFSSYGNITSAKVMREAIVDAPAEAEKDKEADKEKAKKEAGD 403
Query: 351 SKGSGFVAFSTPEEASRALAEMNGKMIVSKP----------------------------- 381
A S E+ S++ + GK +KP
Sbjct: 404 KSEEKGEAKSESEDKSKSEEKTEGKTESAKPEKKHLGKSKGFGFVCFSNPDEASKAVTEM 463
Query: 382 ---------LYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPP--RMPMYPPGPSGLGQQ 430
LYVA+AQRK+ R+++L+ + + + +PP R P PS +
Sbjct: 464 NQRMVHGKPLYVALAQRKDVRKSQLETPSANSKLL-----LPPEWRNPSCSL-PSSMAHL 517
Query: 431 FLYGQAPP-----------AIIPPQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDM 479
+P + P MP GR Q FP P
Sbjct: 518 ASKASSPVLSVECSLLVKLVWVMPGMPS---------GRPGQ-FP---------QFPGQQ 558
Query: 480 GAGIPRRDASVGQPMPITALSTALANASPE-QQRTLLGESLYPLVEQLERDAAAKVTGML 538
G P + P+ ++ A+ NA+PE QQ+ +LGE++YP + + + A K+TGML
Sbjct: 559 GGRAPGQGGIHAMKQPLRSIILAVFNAAPESQQKQMLGEAIYPKILAQQPELAGKITGML 618
Query: 539 LEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNPADQLA 583
LEMD +E++ L++ AL+AKV EA+ V + + + PA + A
Sbjct: 619 LEMDNSELIGLVDDDVALRAKVDEALTVYDEYVKNKNDAPAGEAA 663
>gi|410076202|ref|XP_003955683.1| hypothetical protein KAFR_0B02500 [Kazachstania africana CBS 2517]
gi|372462266|emb|CCF56548.1| hypothetical protein KAFR_0B02500 [Kazachstania africana CBS 2517]
Length = 582
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 260/573 (45%), Positives = 356/573 (62%), Gaps = 36/573 (6%)
Query: 1 MAQIQVQHQAQMSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVR 60
+ Q+ ++ + Q + P+ + + +TSLYVGDLD +V+++ LYD+FS +G V S+R
Sbjct: 12 LEQLNIKDE-QQNAPSSTGSEGQQSDSNSTSLYVGDLDPSVSEALLYDIFSPIGSVTSIR 70
Query: 61 VCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNI 120
VCRD T+ SLGY YVN+A+ A++ LN+TP+ + RIM+S RDP++RK G GNI
Sbjct: 71 VCRDAITKTSLGYAYVNFADHEAGKVAIERLNYTPIKGRLCRIMWSQRDPALRKKGNGNI 130
Query: 121 FIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNG 180
FIKNL+ ID+KAL+DTFS FGNILS KIATD +G SKGFGFV FE + +A+ AID LNG
Sbjct: 131 FIKNLNADIDNKALYDTFSVFGNILSSKIATDENGNSKGFGFVHFEEEAAAKEAIDALNG 190
Query: 181 MLINDKQVFVGHFLRKQERETVAIKTK--FNNVFVKNLDESTTDEDLKKIFGEYGTITSA 238
ML+N ++++V L ++ER++ KT+ F NV+VKN+ TT+E+ K++F + G +S
Sbjct: 191 MLLNGQEIYVAPHLSRKERDSQLEKTRANFTNVYVKNVPLDTTEEEFKELFEKPGKTSSI 250
Query: 239 VVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQF 298
V+ + DGK K FGFVN+EN +DA KAVE LN +F +E YVG+AQKK ER Q LK Q+
Sbjct: 251 VLEKGEDGKLKGFGFVNYENHEDALKAVEELNNTEFKGQELYVGRAQKKYERMQALKQQY 310
Query: 299 EQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVA 358
E E + K+QG+NL+IKNL DSIDDEKLKE F+ FGTITS KVMR +G SKG GFV
Sbjct: 311 EATRLEKMAKYQGVNLFIKNLDDSIDDEKLKEEFAPFGTITSTKVMRTENGKSKGFGFVC 370
Query: 359 FSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQF---SQMRPVAMGPSVPP 415
FS+PEEA++A+ E N +++ KPLYVA+AQRKE RR++L Q SQMR +
Sbjct: 371 FSSPEEATKAITEKNQQIVAGKPLYVAIAQRKEVRRSQLAQQIQARSQMRYQQATAAAAA 430
Query: 416 RMPMYPPGPSGLGQQFLYGQAPPAIIPPQMPPRGHAYRYPLGRNMQDFP---FDMGAGSM 472
P GQ P + MPPRG + P + M P F G
Sbjct: 431 AAAGIP------------GQFMPPMFYGVMPPRGVPFNGPNPQQMNGVPPQQFRNGPMYG 478
Query: 473 LPVPVDMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLV--EQLERDA 530
+P G PR + Q ++QR LGE LY + + + +A
Sbjct: 479 MPPQGAPQGGFPRNGNNANQ-------------FYQQKQRQALGEQLYKKISAKTSDEEA 525
Query: 531 AAKVTGMLLEMDQTEVLHLLESPEALKAKVAEA 563
A K+TGM+L++ EV+ LLE+ E + EA
Sbjct: 526 AGKITGMILDLPPQEVVSLLENDELFEQHFTEA 558
>gi|146415246|ref|XP_001483593.1| hypothetical protein PGUG_04322 [Meyerozyma guilliermondii ATCC
6260]
Length = 631
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 255/571 (44%), Positives = 361/571 (63%), Gaps = 50/571 (8%)
Query: 32 LYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVL 91
LYVG+L+ +V ++ L+++FS +GQV S+RVCRD T++SLGY YVN+ AD +RA++ L
Sbjct: 60 LYVGELNPSVNEALLFEIFSPIGQVSSIRVCRDAVTKKSLGYAYVNFHKHADGSRAIEEL 119
Query: 92 NFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIAT 151
N++ ++ + RIM+S RDPS+R++G GNIFIKNL +ID+KALHDTFS+FG ILSCK+AT
Sbjct: 120 NYSLVDGRPCRIMWSQRDPSLRRNGDGNIFIKNLHPAIDNKALHDTFSAFGRILSCKVAT 179
Query: 152 DGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTKFN 209
D GQSK FGFV +E E+A+ AI+ +NGML+ND++VFVG + K++RE+ +K F
Sbjct: 180 DELGQSKCFGFVHYETAEAAEAAIENVNGMLLNDREVFVGKHVSKRDRESKFEEMKANFT 239
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEAL 269
NV+VKNL + ++IF +G +TS + D +GKS+ FGFVNFEN + A AV+ +
Sbjct: 240 NVYVKNLAPEVDNAKFEEIFKPFGPVTSVHLETDQEGKSRGFGFVNFENHESALNAVKEM 299
Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLK 329
N K+ D ++ YVG+AQKK ER ELK +E E + K+QG+NL++KNL DSID EKL+
Sbjct: 300 NDKEIDGQKLYVGRAQKKRERLDELKRLYESTRLEKLLKYQGVNLFVKNLDDSIDSEKLE 359
Query: 330 ELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQR 389
E F FGTITS +VM D +G SKG GFV FS+PEEA++A+ EMN +MI KPLYVA+AQR
Sbjct: 360 EEFKPFGTITSARVMVDDAGKSKGFGFVCFSSPEEATKAITEMNQRMIQGKPLYVALAQR 419
Query: 390 KEERRARLQAQFS-----QMRPVAMGPSVPPR--MPM--------YPPGPSGLGQQFLYG 434
K+ RR++L+ Q +M+ A +P + +PM +PP G Q G
Sbjct: 420 KDVRRSQLEQQIQARNQMRMQNAAAAAGMPGQFMLPMFYGQQPGFFPPNGRGGAQ----G 475
Query: 435 QAPPAIIPPQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPV----PV------------- 477
PP P M PRG P G+ +P G +PV PV
Sbjct: 476 PFPPN--PQMMMPRGGQMPPPQGQ----WPRAGPNGQPVPVYGMPPVYGGEFNGPNGQRQ 529
Query: 478 DMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLV----EQLERDAAAK 533
GA P R+ G+P L+ ++ +QQ+ +LGE LYP + + E +AA K
Sbjct: 530 QRGAYPPNRNQKGGRPQ--RDLAAIISTVPVDQQKRILGEELYPKIVATGKAQEPEAAGK 587
Query: 534 VTGMLLEMDQTEVLHLLESPEALKAKVAEAM 564
+TGM+L+++ E+L LLE E + +A+
Sbjct: 588 ITGMMLDLENEEILALLEDDELFENHFEDAL 618
>gi|312067233|ref|XP_003136646.1| hypothetical protein LOAG_01058 [Loa loa]
gi|307768188|gb|EFO27422.1| hypothetical protein LOAG_01058 [Loa loa]
Length = 655
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 220/403 (54%), Positives = 289/403 (71%), Gaps = 7/403 (1%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL +VT++ L++ FS G VLS+RVCRD TRRSLGY YVN+ PADA RALD
Sbjct: 19 SLYVGDLHPDVTEAMLFEKFSSAGPVLSIRVCRDAITRRSLGYAYVNFQQPADAERALDT 78
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF + K IRIM+S RDPS+R+SG GNIFIKNLDKSID+KA++DTFS FGNILSCK+A
Sbjct: 79 MNFDMMYGKPIRIMWSQRDPSMRRSGAGNIFIKNLDKSIDNKAIYDTFSMFGNILSCKVA 138
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQE--RETVAIKTKF 208
D SKG+GFV FE +ESAQ AI+K+NGML+ K+V+VG F + RE +F
Sbjct: 139 NDEESNSKGYGFVHFETEESAQKAIEKVNGMLLEGKKVYVGKFQPRTARLREMGETARRF 198
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NV++KN + E L+K+F ++G ITSA VM D DGKSK FGFV FEN +DA KAV
Sbjct: 199 TNVYIKNFADELDKEALEKLFSKFGKITSAAVMVDADGKSKGFGFVAFENPEDAEKAVTE 258
Query: 269 LNGKKF--DDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
++ + +R+ YV +AQKK+ER ELK ++EQ E + ++QG+NLY+KNL D+++D+
Sbjct: 259 MHEYELPGTERKLYVCRAQKKNERSAELKRRYEQQKVERMQRYQGVNLYVKNLDDTVNDD 318
Query: 327 KLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 386
LK+ F +G ITS KVM D +G SKG GFV F P+EA++A+ EMNGKM+ +KPLYVA+
Sbjct: 319 ILKQNFEAYGKITSAKVMCDDNGRSKGFGFVCFEKPDEATKAVTEMNGKMMCTKPLYVAL 378
Query: 387 AQRKEERRARLQAQFSQMRPVAMGPSVPPRMP--MYPPGPSGL 427
AQRKE+R+A+L +Q+ Q R ++ MP +Y PG G
Sbjct: 379 AQRKEDRKAQLASQYMQ-RLASIRMHNAGSMPGTVYTPGTGGF 420
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 98/190 (51%), Gaps = 21/190 (11%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
T++Y+ + + L LFS+ G++ S V D + +S G+G+V + NP DA +A+
Sbjct: 199 TNVYIKNFADELDKEALEKLFSKFGKITSAAVMVD-ADGKSKGFGFVAFENPEDAEKAVT 257
Query: 90 VLNFTPL---------------NNKSIRIMYSHRDPSI----RKSGTGNIFIKNLDKSID 130
++ L N +S + + + R G N+++KNLD +++
Sbjct: 258 EMHEYELPGTERKLYVCRAQKKNERSAELKRRYEQQKVERMQRYQGV-NLYVKNLDDTVN 316
Query: 131 HKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFV 190
L F ++G I S K+ D +G+SKGFGFV FE + A A+ ++NG ++ K ++V
Sbjct: 317 DDILKQNFEAYGKITSAKVMCDDNGRSKGFGFVCFEKPDEATKAVTEMNGKMMCTKPLYV 376
Query: 191 GHFLRKQERE 200
RK++R+
Sbjct: 377 ALAQRKEDRK 386
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 58/85 (68%), Gaps = 6/85 (7%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDA-AAKVTGMLLEMDQTEVLHLLESP 553
P+TA LA A P++Q+ +LGE +YPL+E++ + K+TGM+LEMD +E+L +LE+
Sbjct: 576 PLTA--HMLAQALPQEQKQMLGERIYPLIERIYQGPDVGKITGMMLEMDNSELLMMLENE 633
Query: 554 EALKAKVAEAMEVLRSVAQQQANNP 578
E L++KV+EA VL A + NP
Sbjct: 634 ELLQSKVSEAASVL---ASSKGQNP 655
>gi|361128049|gb|EHL00002.1| putative Polyadenylate-binding protein, cytoplasmic and nuclear
[Glarea lozoyensis 74030]
Length = 783
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 239/518 (46%), Positives = 324/518 (62%), Gaps = 71/518 (13%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVG+LD +VT++ L++LFSQ+G V S+RVCRD TRRSLGY YVNY D +AL
Sbjct: 61 SASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTTDGEKAL 120
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LN+T + + RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++FGNILSCK
Sbjct: 121 EELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILSCK 180
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKT 206
+A D SG SKG+GFV +E E+A AI +NGML+N+K+VFVGH + K++R++ +K
Sbjct: 181 VAQDESGASKGYGFVHYETDEAASQAIKHVNGMLLNEKKVFVGHHIPKKDRQSKFEEMKA 240
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGD-GKSKCFGFVNFENADDAAKA 265
F N++VKN+ TDE+ +++F ++G +TSA + RD D GKS+ FGFVNF N + AA A
Sbjct: 241 NFTNIYVKNIPVEATDEEFRELFEKFGDVTSASLARDQDTGKSRGFGFVNFINHEHAATA 300
Query: 266 VEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDD 325
V+ LNGK F ++ YVG+AQKK ERE+EL+ +E A E K+QG+NLY+KNL D +DD
Sbjct: 301 VDELNGKDFKGQDLYVGRAQKKHEREEELRKSYEAARIEKASKYQGVNLYVKNLDDDVDD 360
Query: 326 EKLKELFSEFGTITSCKVMRDPS------------------------------------- 348
EKL+ELF+ FG ITS KVMRD +
Sbjct: 361 EKLRELFTPFGAITSAKVMRDSAAETAEAEKKEEEKNKENKKEGDAEEGEKADGEKKEAP 420
Query: 349 -------GISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQF 401
G SKG GFV FS P+EA++A+A+MN M+ KPLYVA+AQRK+ R+ +L+A
Sbjct: 421 KSEKRTVGKSKGFGFVCFSNPDEATKAIADMNQNMVNGKPLYVALAQRKDVRKGQLEASI 480
Query: 402 S-----QMRPVAMGPSVPPRM---PM-YPPG------PSGLGQQFLYGQAPPAIIPPQMP 446
+M+ A +PP+ PM YPPG P+ G+ Y PP P
Sbjct: 481 QARNQIRMQQAAAQAGMPPQYMQAPMFYPPGQQPGFMPAAGGRGMPY---PPQAGMPMPA 537
Query: 447 PRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIP 484
G ++P G FP G G +P +M GIP
Sbjct: 538 QGGRPAQFPGG-----FPPQGGRGGPQQMPPNM-YGIP 569
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 56/87 (64%), Gaps = 4/87 (4%)
Query: 480 GAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLL 539
G G+P+ + G + L LA A P QQ+ +LGE+L+P ++ ++ + A K+TGMLL
Sbjct: 672 GPGMPQAGSEGG----ASVLQAQLAAAGPGQQKQVLGEALFPKIQAMQPELAGKITGMLL 727
Query: 540 EMDQTEVLHLLESPEALKAKVAEAMEV 566
EM+ E+++L+E AL+ KV EA+ V
Sbjct: 728 EMENPELVNLIEDESALRNKVDEALTV 754
>gi|410899897|ref|XP_003963433.1| PREDICTED: embryonic polyadenylate-binding protein-like [Takifugu
rubripes]
Length = 606
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 208/385 (54%), Positives = 288/385 (74%), Gaps = 6/385 (1%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
+SG + SLYVGDL +VT++ LY FS G ++S+RVCRD+ TRRSLGY Y+N+ P
Sbjct: 3 SSGPAYPLASLYVGDLHPDVTEAMLYQKFSPAGPIMSIRVCRDIITRRSLGYAYINFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA ALD +N+ + + IRIM+S RDP +RKSG GNIFIKN+D+SID+KAL+DTFS+F
Sbjct: 63 ADAECALDTMNYDVIKGRPIRIMWSQRDPGLRKSGVGNIFIKNMDESIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D G SKG+GFV FE +E+A AI+ +NGML+ND++VFVGHF ++ERE
Sbjct: 123 GNILSCKVVCDERG-SKGYGFVHFETEEAANRAIETMNGMLLNDRKVFVGHFKSRKEREE 181
Query: 202 V--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ KF N+++KN E DE LK++F +G S VM+D G+S+ FGFVNF +
Sbjct: 182 ELGSKALKFTNIYIKNFGEDYNDEKLKEVFAAFGRTLSVRVMKDERGRSRGFGFVNFAHH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAV+ +NGK+ + + YVG+AQK+ ER+ ELK +FE ++ + ++QG+NLY+KNL
Sbjct: 242 EDAQKAVDEMNGKELNGKVIYVGRAQKRLERQGELKRKFELIKQDRIQRYQGVNLYVKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRD-PSGISKGSGFVAFSTPEEASRALAEMNGKMIV 378
DSIDDE+L++ F+ +GTITS KVM D P S+G GFV FS+PEEA++A+ EMNG+++
Sbjct: 302 DDSIDDERLRKEFAPYGTITSAKVMTDGPQ--SRGFGFVCFSSPEEATKAVTEMNGRIVA 359
Query: 379 SKPLYVAVAQRKEERRARLQAQFSQ 403
+KPLYVA+AQR+EER+A L ++ Q
Sbjct: 360 TKPLYVALAQRREERKAILTNKYMQ 384
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 174/562 (30%), Positives = 281/562 (50%), Gaps = 87/562 (15%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ ++D ++ + LYD FS G +LS +V D R S GYG+V++ A RA++
Sbjct: 100 NIFIKNMDESIDNKALYDTFSAFGNILSCKVVCD--ERGSKGYGFVHFETEEAANRAIET 157
Query: 91 LNFTPLNNKSIRI-MYSHRDPSIRKSGT-----GNIFIKNLDKSIDHKALHDTFSSFGNI 144
+N LN++ + + + R + G+ NI+IKN + + + L + F++FG
Sbjct: 158 MNGMLLNDRKVFVGHFKSRKEREEELGSKALKFTNIYIKNFGEDYNDEKLKEVFAAFGRT 217
Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAI 204
LS ++ D G+S+GFGFV F + E AQ A+D++NG +N K ++VG ++ ER+ +
Sbjct: 218 LSVRVMKDERGRSRGFGFVNFAHHEDAQKAVDEMNGKELNGKVIYVGRAQKRLERQG-EL 276
Query: 205 KTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCF 251
K KF N++VKNLD+S DE L+K F YGTITSA VM DG +S+ F
Sbjct: 277 KRKFELIKQDRIQRYQGVNLYVKNLDDSIDDERLRKEFAPYGTITSAKVMTDGP-QSRGF 335
Query: 252 GFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQG 311
GFV F + ++A KAV +NG+ + YV AQ++ ER+ L ++ Q +
Sbjct: 336 GFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRREERKAILTNKYMQRLAT------- 388
Query: 312 LNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAE 371
++ + I D + + + T+ + P+ +S RAL
Sbjct: 389 ----LRTMTSPIIDSYQQAGY--YMTVPQPRSFYSPNAVS-------------TMRALPR 429
Query: 372 MNGK-MIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQ 430
G+ + P + R+ + + V + P + + +G Q
Sbjct: 430 WTGQPHRLQGPYTIVSGPRRGS---------TPIASVRQASTQAPNVISSAQKTNNIGTQ 480
Query: 431 FLYGQAPPAIIPPQMP--PRGHAYRYPLG-RNMQDFPFDMGAGSMLPVPVDMGAGIPRRD 487
+ G+A ++P PR Y+Y RN Q P G +L V +
Sbjct: 481 TVGGRA-------ELPGVPRSGQYKYSSAVRNAQQVP-----GPVLEPSVYIQ------- 521
Query: 488 ASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVL 547
GQ P+TA + LA A Q+ LLGE LYPL+ L + A K+TGMLLE+D +E+L
Sbjct: 522 ---GQE-PLTA--SMLAAAPLMDQKQLLGERLYPLISTLHPNLAGKITGMLLEIDNSELL 575
Query: 548 HLLESPEALKAKVAEAMEVLRS 569
H+LE+PE+L +KV EA+ VL++
Sbjct: 576 HMLETPESLHSKVDEAIAVLQA 597
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 100/289 (34%), Positives = 168/289 (58%), Gaps = 16/289 (5%)
Query: 118 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAID 176
++++ +L + L+ FS G I+S ++ D + +S G+ ++ F+ A+ A+D
Sbjct: 11 ASLYVGDLHPDVTEAMLYQKFSPAGPIMSIRVCRDIITRRSLGYAYINFQQPADAECALD 70
Query: 177 KLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTIT 236
+N +I + + + +R+ K+ N+F+KN+DES ++ L F +G I
Sbjct: 71 TMNYDVIKGRPIRIMW----SQRDPGLRKSGVGNIFIKNMDESIDNKALYDTFSAFGNIL 126
Query: 237 SAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKG 296
S V+ D G SK +GFV+FE + A +A+E +NG +DR+ +VG + + ERE+EL
Sbjct: 127 SCKVVCDERG-SKGYGFVHFETEEAANRAIETMNGMLLNDRKVFVGHFKSRKEREEELGS 185
Query: 297 QFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGF 356
+ A+K T N+YIKN G+ +DEKLKE+F+ FG S +VM+D G S+G GF
Sbjct: 186 K---ALKFT-------NIYIKNFGEDYNDEKLKEVFAAFGRTLSVRVMKDERGRSRGFGF 235
Query: 357 VAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
V F+ E+A +A+ EMNGK + K +YV AQ++ ER+ L+ +F ++
Sbjct: 236 VNFAHHEDAQKAVDEMNGKELNGKVIYVGRAQKRLERQGELKRKFELIK 284
>gi|397482906|ref|XP_003812655.1| PREDICTED: polyadenylate-binding protein 3-like [Pan paniscus]
Length = 634
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 212/379 (55%), Positives = 282/379 (74%), Gaps = 4/379 (1%)
Query: 27 FLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAAR 86
+ T SLYVGDL +VT++ LY+ FS G +LS+RVCRDL TR S Y YVN+ +P DA
Sbjct: 8 YPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRGSSNYAYVNFQHPKDAEH 67
Query: 87 ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
ALD +NF + K +RIM+S RDPS+RKSG GNIF+KNLDKSI++KAL+DT S+FGNILS
Sbjct: 68 ALDTMNFDVIKGKPLRIMWSQRDPSLRKSGMGNIFVKNLDKSINNKALYDTVSAFGNILS 127
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AI 204
C + D +G SKG+GFV FE E+A+ AI+K+NGML+N ++VFVG F ++ERE A
Sbjct: 128 CNVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNGRKVFVGQFKSRKEREAELGAR 186
Query: 205 KTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAK 264
+F NV++KN E DE LK +FG++G S VM D GKSK FGFV+FE +DA K
Sbjct: 187 AKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQK 246
Query: 265 AVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSID 324
AV+ +NGK+ + ++ YVG+AQKK ER+ ELK FEQ ++ + ++Q +NLY+KNL D ID
Sbjct: 247 AVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDDID 306
Query: 325 DEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYV 384
DE+L++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +KPLYV
Sbjct: 307 DERLRKAFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Query: 385 AVAQRKEERRARLQAQFSQ 403
A+AQRKEER+A L ++ Q
Sbjct: 366 ALAQRKEERQAYLTNEYMQ 384
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 112/290 (38%), Positives = 166/290 (57%), Gaps = 21/290 (7%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
+++V +LD ++ + LYD S G +LS V D + S GYG+V++ A RA++
Sbjct: 100 NIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENG--SKGYGFVHFETHEAAERAIEK 157
Query: 91 LNFTPLNNKSIRI----MYSHRDPSI--RKSGTGNIFIKNLDKSIDHKALHDTFSSFGNI 144
+N LN + + + R+ + R N++IKN + +D + L D F FG
Sbjct: 158 MNGMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPA 217
Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAI 204
LS K+ TD SG+SKGFGFV FE E AQ A+D++NG +N KQ++VG +K ER+T
Sbjct: 218 LSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELK 277
Query: 205 KT------------KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFG 252
+T + N++VKNLD+ DE L+K F +GTITSA VM +G G+SK FG
Sbjct: 278 RTFEQMKQDRITRYQVVNLYVKNLDDDIDDERLRKAFSPFGTITSAKVMMEG-GRSKGFG 336
Query: 253 FVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAM 302
FV F + ++A KAV +NG+ + YV AQ+K ER+ L ++ Q M
Sbjct: 337 FVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAYLTNEYMQRM 386
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 107/298 (35%), Positives = 172/298 (57%), Gaps = 16/298 (5%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQ-SKGFGFVQFEN 167
+PS T ++++ +L + L++ FS G ILS ++ D + S + +V F++
Sbjct: 2 NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRGSSNYAYVNFQH 61
Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
+ A++A+D +N +I K + + +R+ K+ N+FVKNLD+S ++ L
Sbjct: 62 PKDAEHALDTMNFDVIKGKPLRIMW----SQRDPSLRKSGMGNIFVKNLDKSINNKALYD 117
Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
+G I S V+ D +G SK +GFV+FE + A +A+E +NG + R+ +VG+ + +
Sbjct: 118 TVSAFGNILSCNVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNGRKVFVGQFKSR 176
Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
ERE EL + ++ N+YIKN G+ +DDE+LK+LF +FG S KVM D
Sbjct: 177 KEREAELGARAKEFP----------NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE 226
Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
SG SKG GFV+F E+A +A+ EMNGK + K +YV AQ+K ER+ L+ F QM+
Sbjct: 227 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMK 284
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 62/83 (74%)
Query: 497 TALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEAL 556
T ++ LA+A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+L++LESPE+L
Sbjct: 542 TLTASRLASAPPQKQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLYMLESPESL 601
Query: 557 KAKVAEAMEVLRSVAQQQANNPA 579
++KV EA+ VL++ ++A A
Sbjct: 602 RSKVDEAVAVLQAHQAKEATQKA 624
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
++ +LYV +LD ++ D +L FS G + S +V + RS G+G+V +++P +A
Sbjct: 289 TRYQVVNLYVKNLDDDIDDERLRKAFSPFGTITSAKVM--MEGGRSKGFGFVCFSSPEEA 346
Query: 85 ARALDVLNFTPLNNKSIRIMYSHR 108
+A+ +N + K + + + R
Sbjct: 347 TKAVTEMNGRIVATKPLYVALAQR 370
>gi|159462882|ref|XP_001689671.1| polyadenylate-binding protein RB47 [Chlamydomonas reinhardtii]
gi|158283659|gb|EDP09409.1| polyadenylate-binding protein RB47 [Chlamydomonas reinhardtii]
Length = 636
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 227/425 (53%), Positives = 297/425 (69%), Gaps = 11/425 (2%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNY---ANPADAAR 86
+SLYVGDL+ +VT++QL++LFS VG V S+RVCRD TRRSLGY YVNY +P A R
Sbjct: 23 SSLYVGDLEKDVTEAQLFELFSSVGPVASIRVCRDAVTRRSLGYAYVNYNSALDPQAADR 82
Query: 87 ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
A++ LN+ +N K +RIM+SHRDPS RKSG GNIFIKNLDK+ID KALHDTFS+FG ILS
Sbjct: 83 AMETLNYHVVNGKPMRIMWSHRDPSARKSGVGNIFIKNLDKTIDAKALHDTFSAFGKILS 142
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKT 206
CK+ATD +G SKG+GFV FE++ +A AI +N I K V+VG F ++ +R +
Sbjct: 143 CKVATDANGVSKGYGFVHFEDQAAADRAIQTVNQKEIEGKIVYVGPFQKRADRP----QD 198
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
+ NVFVKNL D++L K+ E+G ITSAVVM+D G SK FGF+NF++A+ AAK V
Sbjct: 199 VYTNVFVKNLPADIGDDELGKMATEHGEITSAVVMKDDKGGSKGFGFINFKDAESAAKCV 258
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
E LN ++ + Y G+AQKK+ERE L+ + E++ +E K+QG+NLY+KNL D +DD+
Sbjct: 259 EYLNEREMSGKTLYAGRAQKKTEREAMLRQKAEESKQERYLKYQGMNLYVKNLSDEVDDD 318
Query: 327 KLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 386
L+ELF+ GTITSCKVM+D SG SKG GFV F++ +EA+RA+ EMNGKM+ KPLYVA+
Sbjct: 319 ALRELFANSGTITSCKVMKDGSGKSKGFGFVCFTSHDEATRAVTEMNGKMVKGKPLYVAL 378
Query: 387 AQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPPQMP 446
AQRK+ RRA+L+A Q R + MG P PM PA++ P
Sbjct: 379 AQRKDVRRAQLEANM-QAR-MGMGAMSRPPNPMAVTSACAHQAASKPASPHPAMLRPL-- 434
Query: 447 PRGHA 451
PR HA
Sbjct: 435 PRRHA 439
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/61 (60%), Positives = 47/61 (77%)
Query: 508 PEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVL 567
PEQQ+ ++GE LYP V +L+ D A K+TGMLLEMD E+L LLES EAL +KV EA+ VL
Sbjct: 565 PEQQKMMIGERLYPQVAELQPDLAGKITGMLLEMDNAELLMLLESHEALVSKVDEAIAVL 624
Query: 568 R 568
+
Sbjct: 625 K 625
>gi|495594|gb|AAA70421.1| poly(A)-binding protein [Drosophila melanogaster]
Length = 632
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 226/429 (52%), Positives = 294/429 (68%), Gaps = 12/429 (2%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL +V +S L+D FS G VLS+RVCRD+ TRRSLGY YVN+ PADA RALD
Sbjct: 3 SLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALDT 62
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF + NK IRIM+S RDPS+R+SG GN+FIKNLD++ID+KA++DTFS+FGNILSCK+A
Sbjct: 63 MNFDLVRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDRAIDNKAIYDTFSAFGNILSCKVA 122
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNN 210
TD G SKG+GFV FE +E+A +IDK+NGML+N K+V+VG F+ ++E+E F N
Sbjct: 123 TDEKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKEQELGEKAKLFTN 182
Query: 211 VFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALN 270
V+VKN E DE LK+ F YG ITS VM DGKSK FGFV FE + A AV+ALN
Sbjct: 183 VYVKNFTEDFDDEKLKEFFEPYGKITSYKVMSKEDGKSKGFGFVAFETTEAAEAAVQALN 242
Query: 271 GKKF-DDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLK 329
GK + + YV +AQKK+ER+QELK +FE+ ++ + G+NLY+KNL D+IDD++L+
Sbjct: 243 GKDMGEGKSLYVARAQKKAERQQELKRKFEELKQKRHESVFGVNLYVKNLDDTIDDDRLR 302
Query: 330 ELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQR 389
FS +G ITS KVM D G SKG GFV F+ EA+ A+ E+NG+++ SKPLYVA+AQR
Sbjct: 303 IAFSPYGNITSAKVMTDEEGRSKGFGFVCFNPESEATCAVTELNGRVVGSKPLYVALAQR 362
Query: 390 KEERRARLQAQF----SQMRPVAMGPSVPPR------MPMYPPGPSGLGQQFLYG-QAPP 438
KEER+A L +Q+ + MR +G P +P P G Q + P
Sbjct: 363 KEERKADLASQYMRHMTGMRMQQLGQIYQPNAASGFFVPTLPSNQRFFGSQVATQMRNTP 422
Query: 439 AIIPPQMPP 447
+P PP
Sbjct: 423 RWVPQVRPP 431
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 56/70 (80%)
Query: 499 LSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKA 558
+++ LANA P++Q+ +LGE LYP++E + + A K+TGMLLE++ +E+LH++E EALKA
Sbjct: 554 IASLLANAKPQEQKQILGERLYPMIEHMHANLAGKITGMLLEIENSELLHMIEDQEALKA 613
Query: 559 KVAEAMEVLR 568
KV EA+ VL+
Sbjct: 614 KVEEAVAVLQ 623
>gi|82802751|gb|ABB92426.1| PABP3 [Pan troglodytes]
Length = 632
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 212/379 (55%), Positives = 282/379 (74%), Gaps = 4/379 (1%)
Query: 27 FLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAAR 86
+ T SLYVGDL +VT++ LY+ FS G +LS+RVCRDL TR S Y YVN+ +P DA
Sbjct: 8 YPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRGSSNYAYVNFQHPKDAEH 67
Query: 87 ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
ALD +NF + K +RIM+S RDPS+RKSG GNIF+KNLDKSI++KAL+DT S+FGNILS
Sbjct: 68 ALDTMNFDVIKGKPLRIMWSQRDPSLRKSGMGNIFVKNLDKSINNKALYDTVSAFGNILS 127
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AI 204
C + D +G SKG+GFV FE E+A+ AI+K+NGML+N ++VFVG F ++ERE A
Sbjct: 128 CNVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNGRKVFVGQFKSRKEREAELGAR 186
Query: 205 KTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAK 264
+F NV++KN E DE LK +FG++G S VM D GKSK FGFV+FE +DA K
Sbjct: 187 AKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQK 246
Query: 265 AVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSID 324
AV+ +NGK+ + ++ YVG+AQKK ER+ ELK FEQ ++ + ++Q +NLY+KNL D ID
Sbjct: 247 AVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDDID 306
Query: 325 DEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYV 384
DE+L++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +KPLYV
Sbjct: 307 DERLQKAFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Query: 385 AVAQRKEERRARLQAQFSQ 403
A+AQRKEER+A L ++ Q
Sbjct: 366 ALAQRKEERQAYLTNEYMQ 384
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 112/290 (38%), Positives = 166/290 (57%), Gaps = 21/290 (7%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
+++V +LD ++ + LYD S G +LS V D + S GYG+V++ A RA++
Sbjct: 100 NIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENG--SKGYGFVHFETHEAAERAIEK 157
Query: 91 LNFTPLNNKSIRI----MYSHRDPSI--RKSGTGNIFIKNLDKSIDHKALHDTFSSFGNI 144
+N LN + + + R+ + R N++IKN + +D + L D F FG
Sbjct: 158 MNGMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPA 217
Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAI 204
LS K+ TD SG+SKGFGFV FE E AQ A+D++NG +N KQ++VG +K ER+T
Sbjct: 218 LSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELK 277
Query: 205 KT------------KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFG 252
+T + N++VKNLD+ DE L+K F +GTITSA VM +G G+SK FG
Sbjct: 278 RTFEQMKQDRITRYQVVNLYVKNLDDDIDDERLQKAFSPFGTITSAKVMMEG-GRSKGFG 336
Query: 253 FVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAM 302
FV F + ++A KAV +NG+ + YV AQ+K ER+ L ++ Q M
Sbjct: 337 FVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAYLTNEYMQRM 386
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 107/298 (35%), Positives = 172/298 (57%), Gaps = 16/298 (5%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQ-SKGFGFVQFEN 167
+PS T ++++ +L + L++ FS G ILS ++ D + S + +V F++
Sbjct: 2 NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRGSSNYAYVNFQH 61
Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
+ A++A+D +N +I K + + +R+ K+ N+FVKNLD+S ++ L
Sbjct: 62 PKDAEHALDTMNFDVIKGKPLRIMW----SQRDPSLRKSGMGNIFVKNLDKSINNKALYD 117
Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
+G I S V+ D +G SK +GFV+FE + A +A+E +NG + R+ +VG+ + +
Sbjct: 118 TVSAFGNILSCNVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNGRKVFVGQFKSR 176
Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
ERE EL + ++ N+YIKN G+ +DDE+LK+LF +FG S KVM D
Sbjct: 177 KEREAELGARAKEFP----------NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE 226
Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
SG SKG GFV+F E+A +A+ EMNGK + K +YV AQ+K ER+ L+ F QM+
Sbjct: 227 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMK 284
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 62/83 (74%)
Query: 497 TALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEAL 556
T ++ LA+A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+L++LESPE+L
Sbjct: 541 TLTASRLASAPPQKQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLYMLESPESL 600
Query: 557 KAKVAEAMEVLRSVAQQQANNPA 579
++KV EA+ VL++ ++A A
Sbjct: 601 RSKVDEAVAVLQAHQAKEATQKA 623
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
++ +LYV +LD ++ D +L FS G + S +V + RS G+G+V +++P +A
Sbjct: 289 TRYQVVNLYVKNLDDDIDDERLQKAFSPFGTITSAKVM--MEGGRSKGFGFVCFSSPEEA 346
Query: 85 ARALDVLNFTPLNNKSIRIMYSHR 108
+A+ +N + K + + + R
Sbjct: 347 TKAVTEMNGRIVATKPLYVALAQR 370
>gi|194880963|ref|XP_001974622.1| GG21846 [Drosophila erecta]
gi|190657809|gb|EDV55022.1| GG21846 [Drosophila erecta]
Length = 635
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 217/374 (58%), Positives = 280/374 (74%), Gaps = 3/374 (0%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL +V +S L++ FS G VLS+RVCRD+ TRRSLGY YVN+ PADA RALD
Sbjct: 3 SLYVGDLPQDVNESGLFEKFSTAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALDT 62
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF L NK IRIM+S RDPS+R+SG GN+FIKNLD++ID+KA++DTFS+FGNILSCK+A
Sbjct: 63 MNFDLLRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDRAIDNKAIYDTFSAFGNILSCKVA 122
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET-VAIKTK-F 208
TD G SKG+GFV FE +E+A +IDK+NGML+N K+V+VG F+ ++ERE + K K F
Sbjct: 123 TDEKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLF 182
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NV+VKN E DE LK+ F YG ITS VM DGKSK FGFV FE + A AV+A
Sbjct: 183 TNVYVKNFTEDFDDEKLKEFFEPYGKITSYKVMSKEDGKSKGFGFVAFETTEAAEAAVQA 242
Query: 269 LNGKKF-DDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEK 327
LNGK + + YV +AQKK+ER+QELK +FE+ ++ + G+NLY+KNL D+IDD++
Sbjct: 243 LNGKDMGEGKSLYVARAQKKAERQQELKRKFEELKQKRHESVFGVNLYVKNLDDTIDDDR 302
Query: 328 LKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 387
L+ FS +G ITS KVM D G SKG GFV F+ EA+ A+ E+NG+++ SKPLYVA+A
Sbjct: 303 LRIAFSPYGNITSAKVMTDEEGRSKGFGFVCFNAASEATCAVTELNGRVVGSKPLYVALA 362
Query: 388 QRKEERRARLQAQF 401
QRKEER+A L +Q+
Sbjct: 363 QRKEERKAHLASQY 376
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 103/290 (35%), Positives = 164/290 (56%), Gaps = 16/290 (5%)
Query: 118 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAID 176
++++ +L + ++ L + FS+ G +LS ++ D + +S G+ +V F+ A+ A+D
Sbjct: 2 ASLYVGDLPQDVNESGLFEKFSTAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALD 61
Query: 177 KLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTIT 236
+N L+ +K + + +R+ ++ NVF+KNLD + ++ + F +G I
Sbjct: 62 TMNFDLLRNKPIRIMW----SQRDPSLRRSGVGNVFIKNLDRAIDNKAIYDTFSAFGNIL 117
Query: 237 SAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKG 296
S V D G SK +GFV+FE + A +++ +NG + ++ YVGK + ERE+EL
Sbjct: 118 SCKVATDEKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKEREKELG- 176
Query: 297 QFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGF 356
E+A T N+Y+KN + DDEKLKE F +G ITS KVM G SKG GF
Sbjct: 177 --EKAKLFT-------NVYVKNFTEDFDDEKLKEFFEPYGKITSYKVMSKEDGKSKGFGF 227
Query: 357 VAFSTPEEASRALAEMNGK-MIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
VAF T E A A+ +NGK M K LYVA AQ+K ER+ L+ +F +++
Sbjct: 228 VAFETTEAAEAAVQALNGKDMGEGKSLYVARAQKKAERQQELKRKFEELK 277
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 101/292 (34%), Positives = 157/292 (53%), Gaps = 22/292 (7%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ +LD + + +YD FS G +LS +V D S GYG+V++ A ++D
Sbjct: 91 NVFIKNLDRAIDNKAIYDTFSAFGNILSCKVATD-EKGNSKGYGFVHFETEEAANTSIDK 149
Query: 91 LNFTPLNNKSIRI-MYSHRDPSIRKSGT-----GNIFIKNLDKSIDHKALHDTFSSFGNI 144
+N LN K + + + R ++ G N+++KN + D + L + F +G I
Sbjct: 150 VNGMLLNGKKVYVGKFIPRKEREKELGEKAKLFTNVYVKNFTEDFDDEKLKEFFEPYGKI 209
Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLIND-KQVFVGHFLRKQERETVA 203
S K+ + G+SKGFGFV FE E+A+ A+ LNG + + K ++V +K ER+
Sbjct: 210 TSYKVMSKEDGKSKGFGFVAFETTEAAEAAVQALNGKDMGEGKSLYVARAQKKAERQQ-E 268
Query: 204 IKTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKC 250
+K KF N++VKNLD++ D+ L+ F YG ITSA VM D +G+SK
Sbjct: 269 LKRKFEELKQKRHESVFGVNLYVKNLDDTIDDDRLRIAFSPYGNITSAKVMTDEEGRSKG 328
Query: 251 FGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAM 302
FGFV F A +A AV LNG+ + YV AQ+K ER+ L Q+ + M
Sbjct: 329 FGFVCFNAASEATCAVTELNGRVVGSKPLYVALAQRKEERKAHLASQYMRHM 380
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 56/70 (80%)
Query: 499 LSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKA 558
+++ LANA P++Q+ +LGE LYP++E + + A K+TGMLLE++ +E+LH++E EALKA
Sbjct: 557 IASLLANAKPQEQKQILGERLYPMIEHMHANLAGKITGMLLEIENSELLHMIEDQEALKA 616
Query: 559 KVAEAMEVLR 568
KV EA+ VL+
Sbjct: 617 KVEEAVAVLQ 626
>gi|82802753|gb|ABB92427.1| PABP3 [Gorilla gorilla]
Length = 630
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 212/379 (55%), Positives = 281/379 (74%), Gaps = 4/379 (1%)
Query: 27 FLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAAR 86
+ T SLYVGDL +VT++ LY+ FS G +LS+RVCRDL TR S Y YVN+ +P DA
Sbjct: 8 YPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRGSSNYAYVNFQHPKDAEH 67
Query: 87 ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
AL +NF + K +RIM+S RDPS+RK G GNIF+KNLDKSI++KAL+DT S+FGNILS
Sbjct: 68 ALHTMNFDVIKGKPLRIMWSQRDPSLRKRGVGNIFVKNLDKSINNKALYDTVSAFGNILS 127
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AI 204
CK+ D +G SKG+GFV FE E+A+ AI+K+NGML+ND++VFVG F ++ERE A
Sbjct: 128 CKVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGQFKSRKEREAELGAR 186
Query: 205 KTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAK 264
+F NV++KN E DE LK +FG++G S VM D GKSK FGFV+FE +DA K
Sbjct: 187 AKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQK 246
Query: 265 AVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSID 324
AV+ +NGK+ + ++ YVG+AQKK ER+ ELK FEQ ++ + ++Q +NLY+KNL D ID
Sbjct: 247 AVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGID 306
Query: 325 DEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYV 384
DE+L + FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +KPLYV
Sbjct: 307 DERLWKAFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Query: 385 AVAQRKEERRARLQAQFSQ 403
A+AQRKEER+A L ++ Q
Sbjct: 366 ALAQRKEERQAYLTNEYMQ 384
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 107/298 (35%), Positives = 171/298 (57%), Gaps = 16/298 (5%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQ-SKGFGFVQFEN 167
+PS T ++++ +L + L++ FS G ILS ++ D + S + +V F++
Sbjct: 2 NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRGSSNYAYVNFQH 61
Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
+ A++A+ +N +I K + + +R+ K N+FVKNLD+S ++ L
Sbjct: 62 PKDAEHALHTMNFDVIKGKPLRIMW----SQRDPSLRKRGVGNIFVKNLDKSINNKALYD 117
Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
+G I S V+ D +G SK +GFV+FE + A +A+E +NG +DR+ +VG+ + +
Sbjct: 118 TVSAFGNILSCKVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGQFKSR 176
Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
ERE EL + ++ N+YIKN G+ +DDE+LK+LF +FG S KVM D
Sbjct: 177 KEREAELGARAKEFP----------NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE 226
Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
SG SKG GFV+F E+A +A+ EMNGK + K +YV AQ+K ER+ L+ F QM+
Sbjct: 227 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMK 284
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 61/83 (73%)
Query: 497 TALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEAL 556
T ++ LA+A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+L++LESPE+L
Sbjct: 539 TLTASRLASAPPQKQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLYMLESPESL 598
Query: 557 KAKVAEAMEVLRSVAQQQANNPA 579
++K EA+ VL++ ++A A
Sbjct: 599 RSKADEAVAVLQAHEAKEATEKA 621
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
++ +LYV +LD + D +L+ FS G + S +V + RS G+G+V +++P +A
Sbjct: 289 TRYQVVNLYVKNLDDGIDDERLWKAFSPFGTITSAKVM--MEGGRSKGFGFVCFSSPEEA 346
Query: 85 ARALDVLNFTPLNNKSIRIMYSHR 108
+A+ +N + K + + + R
Sbjct: 347 TKAVTEMNGRIVATKPLYVALAQR 370
>gi|114649018|ref|XP_001154541.1| PREDICTED: polyadenylate-binding protein 3 isoform 5 [Pan
troglodytes]
Length = 633
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 212/379 (55%), Positives = 282/379 (74%), Gaps = 4/379 (1%)
Query: 27 FLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAAR 86
+ T SLYVGDL +VT++ LY+ FS G +LS+RVCRDL TR S Y YVN+ +P DA
Sbjct: 8 YPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRGSSNYAYVNFQHPKDAEH 67
Query: 87 ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
ALD +NF + K +RIM+S RDPS+RKSG GNIF+KNLDKSI++KAL+DT S+FGNILS
Sbjct: 68 ALDTMNFDVIKGKPLRIMWSQRDPSLRKSGMGNIFVKNLDKSINNKALYDTVSAFGNILS 127
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AI 204
C + D +G SKG+GFV FE E+A+ AI+K+NGML+N ++VFVG F ++ERE A
Sbjct: 128 CNVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNGRKVFVGQFKSRKEREAELGAR 186
Query: 205 KTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAK 264
+F NV++KN E DE LK +FG++G S VM D GKSK FGFV+FE +DA K
Sbjct: 187 AKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQK 246
Query: 265 AVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSID 324
AV+ +NGK+ + ++ YVG+AQKK ER+ ELK FEQ ++ + ++Q +NLY+KNL D ID
Sbjct: 247 AVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDDID 306
Query: 325 DEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYV 384
DE+L++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +KPLYV
Sbjct: 307 DERLQKAFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Query: 385 AVAQRKEERRARLQAQFSQ 403
A+AQRKEER+A L ++ Q
Sbjct: 366 ALAQRKEERQAYLTNEYMQ 384
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 112/290 (38%), Positives = 166/290 (57%), Gaps = 21/290 (7%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
+++V +LD ++ + LYD S G +LS V D + S GYG+V++ A RA++
Sbjct: 100 NIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENG--SKGYGFVHFETHEAAERAIEK 157
Query: 91 LNFTPLNNKSIRI----MYSHRDPSI--RKSGTGNIFIKNLDKSIDHKALHDTFSSFGNI 144
+N LN + + + R+ + R N++IKN + +D + L D F FG
Sbjct: 158 MNGMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPA 217
Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAI 204
LS K+ TD SG+SKGFGFV FE E AQ A+D++NG +N KQ++VG +K ER+T
Sbjct: 218 LSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELK 277
Query: 205 KT------------KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFG 252
+T + N++VKNLD+ DE L+K F +GTITSA VM +G G+SK FG
Sbjct: 278 RTFEQMKQDRITRYQVVNLYVKNLDDDIDDERLQKAFSPFGTITSAKVMMEG-GRSKGFG 336
Query: 253 FVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAM 302
FV F + ++A KAV +NG+ + YV AQ+K ER+ L ++ Q M
Sbjct: 337 FVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAYLTNEYMQRM 386
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 107/298 (35%), Positives = 172/298 (57%), Gaps = 16/298 (5%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQ-SKGFGFVQFEN 167
+PS T ++++ +L + L++ FS G ILS ++ D + S + +V F++
Sbjct: 2 NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRGSSNYAYVNFQH 61
Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
+ A++A+D +N +I K + + +R+ K+ N+FVKNLD+S ++ L
Sbjct: 62 PKDAEHALDTMNFDVIKGKPLRIMW----SQRDPSLRKSGMGNIFVKNLDKSINNKALYD 117
Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
+G I S V+ D +G SK +GFV+FE + A +A+E +NG + R+ +VG+ + +
Sbjct: 118 TVSAFGNILSCNVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNGRKVFVGQFKSR 176
Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
ERE EL + ++ N+YIKN G+ +DDE+LK+LF +FG S KVM D
Sbjct: 177 KEREAELGARAKEF----------PNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE 226
Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
SG SKG GFV+F E+A +A+ EMNGK + K +YV AQ+K ER+ L+ F QM+
Sbjct: 227 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMK 284
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 62/83 (74%)
Query: 497 TALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEAL 556
T ++ LA+A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+L++LESPE+L
Sbjct: 541 TLTASRLASAPPQKQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLYMLESPESL 600
Query: 557 KAKVAEAMEVLRSVAQQQANNPA 579
++KV EA+ VL++ ++A A
Sbjct: 601 RSKVDEAVAVLQAHQAKEATQKA 623
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
++ +LYV +LD ++ D +L FS G + S +V + RS G+G+V +++P +A
Sbjct: 289 TRYQVVNLYVKNLDDDIDDERLQKAFSPFGTITSAKVM--MEGGRSKGFGFVCFSSPEEA 346
Query: 85 ARALDVLNFTPLNNKSIRIMYSHR 108
+A+ +N + K + + + R
Sbjct: 347 TKAVTEMNGRIVATKPLYVALAQR 370
>gi|426374960|ref|XP_004054321.1| PREDICTED: polyadenylate-binding protein 3 [Gorilla gorilla
gorilla]
Length = 631
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 212/379 (55%), Positives = 281/379 (74%), Gaps = 4/379 (1%)
Query: 27 FLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAAR 86
+ T SLYVGDL +VT++ LY+ FS G +LS+RVCRDL TR S Y YVN+ +P DA
Sbjct: 8 YPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRGSSNYAYVNFQHPKDAEH 67
Query: 87 ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
AL +NF + K +RIM+S RDPS+RK G GNIF+KNLDKSI++KAL+DT S+FGNILS
Sbjct: 68 ALHTMNFDVIKGKPLRIMWSQRDPSLRKRGVGNIFVKNLDKSINNKALYDTVSAFGNILS 127
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AI 204
CK+ D +G SKG+GFV FE E+A+ AI+K+NGML+ND++VFVG F ++ERE A
Sbjct: 128 CKVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGQFKSRKEREAELGAR 186
Query: 205 KTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAK 264
+F NV++KN E DE LK +FG++G S VM D GKSK FGFV+FE +DA K
Sbjct: 187 AKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQK 246
Query: 265 AVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSID 324
AV+ +NGK+ + ++ YVG+AQKK ER+ ELK FEQ ++ + ++Q +NLY+KNL D ID
Sbjct: 247 AVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGID 306
Query: 325 DEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYV 384
DE+L + FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +KPLYV
Sbjct: 307 DERLWKAFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Query: 385 AVAQRKEERRARLQAQFSQ 403
A+AQRKEER+A L ++ Q
Sbjct: 366 ALAQRKEERQAYLTNEYMQ 384
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 107/298 (35%), Positives = 171/298 (57%), Gaps = 16/298 (5%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQ-SKGFGFVQFEN 167
+PS T ++++ +L + L++ FS G ILS ++ D + S + +V F++
Sbjct: 2 NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRGSSNYAYVNFQH 61
Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
+ A++A+ +N +I K + + +R+ K N+FVKNLD+S ++ L
Sbjct: 62 PKDAEHALHTMNFDVIKGKPLRIMW----SQRDPSLRKRGVGNIFVKNLDKSINNKALYD 117
Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
+G I S V+ D +G SK +GFV+FE + A +A+E +NG +DR+ +VG+ + +
Sbjct: 118 TVSAFGNILSCKVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGQFKSR 176
Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
ERE EL + ++ N+YIKN G+ +DDE+LK+LF +FG S KVM D
Sbjct: 177 KEREAELGARAKEFP----------NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE 226
Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
SG SKG GFV+F E+A +A+ EMNGK + K +YV AQ+K ER+ L+ F QM+
Sbjct: 227 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMK 284
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 61/83 (73%)
Query: 497 TALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEAL 556
T ++ LA+A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+L++LESPE+L
Sbjct: 539 TLTASRLASAPPQKQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLYMLESPESL 598
Query: 557 KAKVAEAMEVLRSVAQQQANNPA 579
++K EA+ VL++ ++A A
Sbjct: 599 RSKAGEAVAVLQAHEAKEATEKA 621
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
++ +LYV +LD + D +L+ FS G + S +V + RS G+G+V +++P +A
Sbjct: 289 TRYQVVNLYVKNLDDGIDDERLWKAFSPFGTITSAKVM--MEGGRSKGFGFVCFSSPEEA 346
Query: 85 ARALDVLNFTPLNNKSIRIMYSHR 108
+A+ +N + K + + + R
Sbjct: 347 TKAVTEMNGRIVATKPLYVALAQR 370
>gi|156064711|ref|XP_001598277.1| hypothetical protein SS1G_00363 [Sclerotinia sclerotiorum 1980]
gi|154691225|gb|EDN90963.1| hypothetical protein SS1G_00363 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 784
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 236/519 (45%), Positives = 324/519 (62%), Gaps = 69/519 (13%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVG+LD +VT++ L++LFSQ+G V S+RVCRD TRRSLGY YVNY D +AL
Sbjct: 60 SASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAITRRSLGYAYVNYNTTVDGEKAL 119
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LN+T + + RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++FGNILSCK
Sbjct: 120 EELNYTLIKGRPCRIMWSQRDPALRKNGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCK 179
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKT 206
+A D SG SKG+GFV +E E+A AI +NGML+N+K+VFVGH + K++R++ +K
Sbjct: 180 VAQDESGASKGYGFVHYETDEAAAQAIKHVNGMLLNEKKVFVGHHIPKKDRQSKFEEMKA 239
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGD-GKSKCFGFVNFENADDAAKA 265
F N++VKN+ T+E+ +++F ++G +TSA + RD + GKS+ FGFVNF N + AA A
Sbjct: 240 NFTNIYVKNIPVEATEEEFRELFEKFGDVTSASLARDTESGKSRGFGFVNFINHEHAATA 299
Query: 266 VEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDD 325
V+ LNGK F ++ YVG+AQKK ERE+EL+ +E A E K+QG+NLY+KNL D IDD
Sbjct: 300 VDELNGKDFKGQDLYVGRAQKKHEREEELRRSYEAARMEKASKYQGVNLYVKNLDDEIDD 359
Query: 326 EKLKELFSEFGTITSCKVMRD--------------------------------------- 346
EKL+ELF+ FG ITS KVMRD
Sbjct: 360 EKLRELFAPFGAITSAKVMRDTPAETADAEDKKEKDEEKNKENKKEGEAETEEASAPKAK 419
Query: 347 -PSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
P G SKG GFV F+ P+EA++A+++MN +M+ +KPLYVA+AQRK+ R+++L+A
Sbjct: 420 RPLGKSKGFGFVCFNNPDEATKAVSDMNQRMVSNKPLYVALAQRKDVRKSQLEASIQARN 479
Query: 406 PVAMGPSVPPRMPMYPPGPSGLGQQFLYGQA--PPAIIPPQMPPRGHAYRYPLGRNMQDF 463
+ M + +G+ QQ++ PP P P+G GR MQ F
Sbjct: 480 QIRMQQAA---------AQAGMPQQYMQAPMFFPPGAQQPGFLPQG-------GRGMQ-F 522
Query: 464 PFDMG---AGSMLPVPVDMGAGIP----RRDASVGQPMP 495
P G G+ P AG P R A GQ MP
Sbjct: 523 PPQAGMPIPGAQAGRPGQFQAGFPPQQAGRGAPAGQQMP 561
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 86/163 (52%), Gaps = 14/163 (8%)
Query: 406 PVAMGP--SVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPPQMPPRGHAYRYPLGRNMQDF 463
P A GP +PP M M P G G+ QF G MP RG P G+ F
Sbjct: 605 PNARGPMQGMPPNMAM-PMGQQGM-PQFQQGARQGG-----MPGRGAQAGRP-GQFAGGF 656
Query: 464 PFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLV 523
P G G +P + +P+ G +P T L + + P+QQ+ +LGE+L+P +
Sbjct: 657 PPQAGRG--MPQQIPGMPQMPQMPQEGG--VPTTLLQAQVQSVPPQQQKQILGEALFPKI 712
Query: 524 EQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEV 566
+ L+ + A K+TGMLLEM+ E+++L+E +L+AKV EA+ V
Sbjct: 713 QVLQPELAGKITGMLLEMENQELINLIEDDASLRAKVDEALTV 755
>gi|345561329|gb|EGX44424.1| hypothetical protein AOL_s00193g6 [Arthrobotrys oligospora ATCC
24927]
Length = 744
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 216/412 (52%), Positives = 292/412 (70%), Gaps = 28/412 (6%)
Query: 20 AGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYA 79
A S N + SLYVG+LD +VT++ L++LFS +GQV S+RVCRD TRRSLGY YVNY
Sbjct: 41 ASGSTNAPHSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYN 100
Query: 80 NPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFS 139
N AD RAL+ LN+T + + RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF+
Sbjct: 101 NTADGERALEELNYTLIKGRPCRIMWSQRDPALRKTGHGNVFIKNLDIAIDNKALHDTFA 160
Query: 140 SFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER 199
+FGNILSCK+A D +G SKG+GFV +E E+A NAI +NGML+N+K+V+VGH + K+ER
Sbjct: 161 AFGNILSCKVAQDENGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVYVGHHIPKKER 220
Query: 200 ETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGD-GKSKCFGFVNF 256
++ +K F NV+VKN+D +D++ + +F +G ITSA + RDGD G S+ FGFVNF
Sbjct: 221 QSKFDEMKANFTNVYVKNIDPEVSDDEFRTLFENFGQITSASLARDGDSGTSRGFGFVNF 280
Query: 257 ENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYI 316
+ + AA AV+AL+ + + +VG+AQKK ERE+EL+ Q+E A E K+QG+NLY+
Sbjct: 281 SSHEAAAAAVDALHETELKGQALFVGRAQKKHEREEELRKQYEAARIEKASKYQGVNLYV 340
Query: 317 KNLGDSIDDEKLKELFSEFGTITSCKVMRDP-------------------------SGIS 351
KNL D IDDE+L++ FS +GTITS KVMRD G S
Sbjct: 341 KNLDDEIDDERLRQEFSPYGTITSAKVMRDSLDSPKEKDGEESKVGEPEEKATDKKQGKS 400
Query: 352 KGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQ 403
KG GFV FS P+EAS+A+AEMN +M+ KPLYVA+AQRK+ R+++L+A Q
Sbjct: 401 KGFGFVCFSNPDEASKAVAEMNQRMVNGKPLYVALAQRKDVRKSQLEASIQQ 452
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 175/610 (28%), Positives = 264/610 (43%), Gaps = 102/610 (16%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ +LD + + L+D F+ G +LS +V +D S GYG+V+Y A A+
Sbjct: 140 NVFIKNLDIAIDNKALHDTFAAFGNILSCKVAQD-ENGNSKGYGFVHYETAEAATNAIKH 198
Query: 91 LNFTPLNNKSIRIMYSHRDPSIR--------KSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
+N LN K + + H P K+ N+++KN+D + F +FG
Sbjct: 199 VNGMLLNEKKVYV--GHHIPKKERQSKFDEMKANFTNVYVKNIDPEVSDDEFRTLFENFG 256
Query: 143 NILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
I S +A DG SG S+GFGFV F + E+A A+D L+ + + +FVG +K ERE
Sbjct: 257 QITSASLARDGDSGTSRGFGFVNFSSHEAAAAAVDALHETELKGQALFVGRAQKKHEREE 316
Query: 202 ------------VAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG----- 244
A K + N++VKNLD+ DE L++ F YGTITSA VMRD
Sbjct: 317 ELRKQYEAARIEKASKYQGVNLYVKNLDDEIDDERLRQEFSPYGTITSAKVMRDSLDSPK 376
Query: 245 --------------------DGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKA 284
GKSK FGFV F N D+A+KAV +N + + + YV A
Sbjct: 377 EKDGEESKVGEPEEKATDKKQGKSKGFGFVCFSNPDEASKAVAEMNQRMVNGKPLYVALA 436
Query: 285 QKKSEREQELKGQFEQ-----------AMKETVDKFQGLNLYIKNLGDSIDDEKLKELFS 333
Q+K R+ +L+ +Q A + LY + + L
Sbjct: 437 QRKDVRKSQLEASIQQRNQIRMQQAAAAAGMPPQPYLSAPLYYQPGAPGVQPPFLAGPGG 496
Query: 334 EFGTITSCKVMRDPSGIS-KGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEE 392
+G+ G+G + + P A+ + NG P+Y Q
Sbjct: 497 PGVPPNRLPFPPQQAGMMISGAGRASGNWPPSANPSGGNRNGTQGQPAPIYGMTGQGGPG 556
Query: 393 RRARLQAQFSQMRPVAMGPSV--PPRMPMYPP---GPSGLGQQFLYGQAPPAIIPPQMPP 447
+ F+Q + AM P+ P++ + P G+ QQ
Sbjct: 557 GQFGYAQAFNQAQLAAMNPAARGAPQLGLNPGRGLSSGGVNQQM---------------- 600
Query: 448 RGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALSTALANAS 507
GH R PLGR V G G AS G P + L+ N
Sbjct: 601 -GHQQRGPLGRG---------------VAPSQGRGYHSDQASQGAPPQLANLN----NLP 640
Query: 508 PEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVL 567
P+QQ+ +LGE+LYP + + A K+TGMLLEMD E+L+L++ AL+ KV EA+ V
Sbjct: 641 PQQQKQVLGEALYPRIHAINPQLAGKITGMLLEMDNNELLNLIKDDSALRNKVDEALSVY 700
Query: 568 RSVAQQQANN 577
+ +A +
Sbjct: 701 DEYVKSKATD 710
>gi|154275140|ref|XP_001538421.1| polyadenylate-binding protein [Ajellomyces capsulatus NAm1]
gi|150414861|gb|EDN10223.1| polyadenylate-binding protein [Ajellomyces capsulatus NAm1]
Length = 732
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 249/549 (45%), Positives = 331/549 (60%), Gaps = 83/549 (15%)
Query: 15 PNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYG 74
PN +AG S Q + SLYVG+LD +VT++ L++LFS +GQV S+RVCRD TRRSLGY
Sbjct: 42 PN--SAGPSTTQPHSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYA 99
Query: 75 YVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKAL 134
YVNY N AD RAL+ LN+T + K RIM+S RDP++RK+G GN+FIKNLD +ID+KAL
Sbjct: 100 YVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKAL 159
Query: 135 HDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFL 194
HDTF++FGNILSCK+A D G SKG+GFV +E E+A NAI +NGML+N+K+VFVGH +
Sbjct: 160 HDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHI 219
Query: 195 RKQERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGD-GKSKCF 251
K++R++ +K F NV+VKNLD ++E+ +++F +YG ITSA + RDG+ GKS+ F
Sbjct: 220 AKKDRQSKFEEMKANFTNVYVKNLDTEVSNEEFRELFEKYGEITSASISRDGETGKSRGF 279
Query: 252 GFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQG 311
GF F + AA AVE LN K++ ++ YVG+AQKK ERE+EL+ Q E A E K+QG
Sbjct: 280 GFFYFLKHESAAAAVEELNDKEYKGQKLYVGRAQKKHEREEELRKQHEAARVEKASKYQG 339
Query: 312 LNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSG---------------------- 349
+NLY+KNL D IDDEKL++LF FG ITS +VMRD +G
Sbjct: 340 VNLYVKNLTDDIDDEKLRDLFISFGNITSARVMRDTAGDPGSESEKEKESANKENVKDEA 399
Query: 350 ----------------------------ISKGSG--FVAFSTPEEASRALAEMNGKMIVS 379
+ K G FV FS P+EAS+A+ EMN +M+
Sbjct: 400 KKESGEEDSADKSDKVEKSDSKNATEKKLGKSKGFGFVCFSNPDEASKAVTEMNQRMVNG 459
Query: 380 KPLYVAVAQRKEERRARLQAQF-------SQMRPVAMGPSVPPRMP--MYPPG-----PS 425
KPLYVA+AQRK+ R+++L+A Q A G S P P YPPG P+
Sbjct: 460 KPLYVALAQRKDVRKSQLEASIQARNTIRQQQVAAAAGMSQPFMQPAVYYPPGQQGFIPA 519
Query: 426 GLGQQ--FLYGQAPPAIIP--PQMPPRGHAYRYP-------LGRNMQDFPFDMGAGSM-L 473
Q+ +GQ P +IP P P A +P + N Q P G G+ L
Sbjct: 520 NAAQRGGMAFGQQPGMVIPGIPGGRPGQFAAGFPGQQGGRGINPNQQLPPNAFGLGAQGL 579
Query: 474 PVPVDMGAG 482
P+ G G
Sbjct: 580 PIGALQGPG 588
>gi|170674510|gb|ACB30143.1| poly(A) RNA binding protein [Epichloe festucae]
Length = 739
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 219/453 (48%), Positives = 302/453 (66%), Gaps = 52/453 (11%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVG+LD +VT++ L++LFSQ+G V S+RVCRD TRRSLGY YVNY + +D +AL
Sbjct: 58 SASLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNSTSDGEKAL 117
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LN+T + + RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++FGNILSCK
Sbjct: 118 EELNYTIIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCK 177
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKT 206
+A D G SKG+GFV +E E+AQ AI +NGML+N+K+V+VGH + K++R++ +K
Sbjct: 178 VAQDEHGNSKGYGFVHYETDEAAQQAIKHVNGMLLNEKKVYVGHHIPKKDRQSKFEEMKA 237
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
F N++VKN++ +D++ +++F YG ITS+ + RD DGKS+ FGFVN+ + A KAV
Sbjct: 238 NFTNIYVKNVNPEASDDEFRELFERYGEITSSSLARDQDGKSRGFGFVNYTTHESAYKAV 297
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
+ LNGK F ++ YVG+AQKK ERE+EL+ +E A E K+QG+NLYIKNL D +DDE
Sbjct: 298 DELNGKDFKGQDLYVGRAQKKHEREEELRKSYEAARLEKASKYQGVNLYIKNLDDDVDDE 357
Query: 327 KLKELFSEFGTITSCKVMRD-PS------------------------------------- 348
KL+ +FSEFG ITS KVMRD PS
Sbjct: 358 KLRHMFSEFGPITSAKVMRDAPSDGSDEEKEDEQEAEPKKEGNVVEADEEGSEKKGDKKF 417
Query: 349 GISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVA 408
G SKG GFV FS P++A++A+AEM+ +MI KPLYVA+AQRK+ R+++L+A +
Sbjct: 418 GKSKGFGFVCFSNPDDATKAVAEMSQRMINGKPLYVALAQRKDVRKSQLEASIQARNQLR 477
Query: 409 MGPSVP----PRMPMYPPGPSGLGQQFLYGQAP 437
M + P+ M PP YGQ P
Sbjct: 478 MQQAAAAAGMPQQYMQPP--------VFYGQQP 502
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 52/82 (63%)
Query: 499 LSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKA 558
L L++A P QQ+ +LGE ++P ++ + + A K+TGMLLEMD TE++ L+E ALKA
Sbjct: 646 LQQQLSSAPPAQQKQILGEVIFPKIQAINAELAGKITGMLLEMDNTELISLIEDDAALKA 705
Query: 559 KVAEAMEVLRSVAQQQANNPAD 580
KV EA+ V + Q A+
Sbjct: 706 KVEEALAVYDEYVKSQGTEQAE 727
>gi|327299218|ref|XP_003234302.1| polyadenylate-binding protein [Trichophyton rubrum CBS 118892]
gi|326463196|gb|EGD88649.1| polyadenylate-binding protein [Trichophyton rubrum CBS 118892]
Length = 781
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 252/558 (45%), Positives = 338/558 (60%), Gaps = 93/558 (16%)
Query: 15 PNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYG 74
P+G AA A+ +Q + SLYVG+LD +VT++ LY+LFS +GQV S+RVCRD TRRSLGY
Sbjct: 44 PSGTAAPAT-SQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYA 102
Query: 75 YVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKAL 134
YVNY N AD RAL+ LN+T + + RIM+S RDP++RK+G GN+FIKNLD +ID+KAL
Sbjct: 103 YVNYNNTADGERALEDLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKAL 162
Query: 135 HDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFL 194
HDTF++FGNILSCK+A D G SKG+GFV +E E+A NAI +NGML+N+K+VFVGH +
Sbjct: 163 HDTFAAFGNILSCKVAQDEYGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHI 222
Query: 195 RKQERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGD-GKSKCF 251
K++R++ +K F N++VKN+++ TDE+ + +F +YG ITSA + RD + GKS+ F
Sbjct: 223 AKKDRQSKFEEMKANFTNIYVKNVEQDVTDEEFRGLFEKYGEITSATLSRDNETGKSRGF 282
Query: 252 GFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQG 311
GFVNF + + A+ AVEALN + ++ YVG+AQKK ERE+EL+ Q+E A E K+QG
Sbjct: 283 GFVNFSDHEAASAAVEALNEYELKGQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQG 342
Query: 312 LNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRD-----PSGISKG------------- 353
+NLYIKNL D IDDEKL+ELFS +G ITS KVMR+ P+ KG
Sbjct: 343 VNLYIKNLSDDIDDEKLRELFSSYGNITSAKVMREAIVDVPAETEKGKEADKEKAKEAGD 402
Query: 354 ---------------------------------------SGF--VAFSTPEEASRALAEM 372
GF V FS P+EAS+A+ EM
Sbjct: 403 KSEEKGESKSESEDKSKSEEKSEGKTESAKPEKRHLGKSKGFGFVCFSNPDEASKAVTEM 462
Query: 373 NGKMIVSKPLYVAVAQRKEERRARLQAQF-------SQMRPVAMG---PSVPPRMPMYPP 422
N +M+ KPLYVA+AQRK+ R+++L+A Q A G P + P + P
Sbjct: 463 NQRMVHGKPLYVALAQRKDVRKSQLEASIQARNTIRQQQVAAAAGMAQPFMQPAVFYGAP 522
Query: 423 GPSGL------GQQFLYGQAPPAIIPPQMPPRGHAYRYPL------GRNM---QDFPFDM 467
G G G QF GQA ++ P M P G ++P GR M Q P +
Sbjct: 523 GQQGFLPGAQRGMQFA-GQA--GMVMPGM-PGGRPGQFPQFPGQQGGRGMNPNQPLPPNF 578
Query: 468 GAGSM-LPVPVDMGAGIP 484
GS +P+ AGIP
Sbjct: 579 AMGSQGIPMGAMQSAGIP 596
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 64/102 (62%), Gaps = 6/102 (5%)
Query: 483 IPRRDASVGQPMPITALSTALANASPE-QQRTLLGESLYPLVEQLERDAAAKVTGMLLEM 541
IPR +A+ +++ A+ NA+PE QQ+ +LGE++YP + + + A K+TGMLLEM
Sbjct: 672 IPRDEAAGS-----GSINLAVFNAAPEPQQKQMLGEAIYPKILAQQPELAGKITGMLLEM 726
Query: 542 DQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNPADQLA 583
D +E++ L++ AL+AKV EA+ V + + + P + A
Sbjct: 727 DNSELIGLVDDDVALRAKVDEALTVYDEYVKNKNDAPTGEAA 768
>gi|440899695|gb|ELR50961.1| Polyadenylate-binding protein 1-like protein, partial [Bos
grunniens mutus]
Length = 618
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 225/430 (52%), Positives = 299/430 (69%), Gaps = 28/430 (6%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
ASG + SLYVGDL +VT++ LY+ FS G +LS+RVCRD++TRRSLGY Y+N+ P
Sbjct: 3 ASGPGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + + IRIM+S RDP +RKSG GNIFIKNL+ SID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFEVIKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D G S+GFGFV FE E+AQNAI +NGML+ND++VFVGHF ++ERE
Sbjct: 123 GNILSCKVVCDEHG-SRGFGFVHFETHEAAQNAISTMNGMLLNDRKVFVGHFKSRREREV 181
Query: 202 V--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
A +F N++VKNL ++ L+ +F ++G + S VMRD G S+ FGFVNFE
Sbjct: 182 ELGARAMEFTNIYVKNLHVDVDEQRLQDLFSQFGKMLSVKVMRDVSGHSRGFGFVNFEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
++A KAV +NG++ R YVG+AQK+ ER+ ELK +FEQ ++ + ++QG+NLY+KNL
Sbjct: 242 EEAQKAVVNMNGREVSGRLLYVGRAQKRVERQNELKRRFEQMKQDRLTRYQGVNLYVKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
DSIDDEKL++ FS +G ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +
Sbjct: 302 DDSIDDEKLRKEFSPYGVITSAKVMTE-GGHSKGFGFVCFSSPEEATKAVTEMNGRIVGT 360
Query: 380 KPLYVAVAQRKEERRARLQAQFSQ----MRPVAMG---------------PSVPPRMPMY 420
KPLYVA+A E R+A L Q+ Q MR A+G P+VP
Sbjct: 361 KPLYVALA---EGRKAILTNQYMQRLSTMR--ALGGPILGSFQQPASYFLPAVPQVTACP 415
Query: 421 PPGPSGLGQQ 430
PP G G+Q
Sbjct: 416 PPFRDGQGEQ 425
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 47/66 (71%), Gaps = 2/66 (3%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A +Q+ ++GE L+PLV + A K+TGMLLE+D +E+L +LESPE
Sbjct: 555 PLTA--SMLAAAPLHEQKQMIGERLFPLVYNVHAHLAGKITGMLLEIDNSELLLMLESPE 612
Query: 555 ALKAKV 560
+L AKV
Sbjct: 613 SLNAKV 618
>gi|218192545|gb|EEC74972.1| hypothetical protein OsI_11001 [Oryza sativa Indica Group]
Length = 647
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 254/629 (40%), Positives = 366/629 (58%), Gaps = 61/629 (9%)
Query: 17 GVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYV 76
V A A G +LYVGDL +V + L ++F ++G + SVRVCRD +T SL YGYV
Sbjct: 25 AVPAAAGGLNATVPALYVGDLHESVREEHLLEVFGKIGTLTSVRVCRDNATSNSLRYGYV 84
Query: 77 NYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHD 136
NY + ADAA AL+ LN + + +K IR+M+S+RDP R+SG GN+F+KNL+ +D+ +L +
Sbjct: 85 NYLSQADAAIALEKLNHSLILDKPIRVMWSNRDPDARRSGVGNVFVKNLNDLVDNVSLQE 144
Query: 137 TFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRK 196
F FG+ILSCK+A + G S+G+GFVQF +ESA +I LN +Q+ V F++K
Sbjct: 145 LFCKFGDILSCKVAKNEDGTSRGYGFVQFALQESADASIQNLNNSHFCGRQLHVATFIKK 204
Query: 197 QERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNF 256
ER T K+ N+++KNLD+ T+E +K F +YG + S +M+ DG SK FGFV+F
Sbjct: 205 SERSTNN-DDKYTNLYMKNLDDDITEELIKLKFSQYGLVISVKIMKRDDGTSKGFGFVSF 263
Query: 257 ENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYI 316
+N + A +A E++NG + YV +AQKK+ER+Q L+ E+ E + K G N+YI
Sbjct: 264 QNPESAKRAKESMNGMLLGSKTLYVARAQKKAERKQYLQCLHEEKRNEIITKSNGSNVYI 323
Query: 317 KNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKM 376
KN+ D + D+ L+E F+EFG ITS K+MRD GISKG GFV ++TPEEA A++ M G M
Sbjct: 324 KNINDEVGDDALRERFNEFGNITSAKIMRDEKGISKGFGFVCYNTPEEAKCAVSNMRGVM 383
Query: 377 IVSKPLYVAVAQRKEERRARLQAQFSQMRPV--AMGPSVPPRMP---------------- 418
KPLYVA+AQRKEERRA+L+ +F+++ + A P +P P
Sbjct: 384 FYGKPLYVAIAQRKEERRAKLEQRFAELATMVGATSPVIPTGYPQFYFAHPSTHLPQSPG 443
Query: 419 ----MYPPGPSGLGQQFLYGQAPPA-----IIPPQMPPRGHAYRYPLGR---NMQDFPFD 466
MYP P G+ Q++ + P + I P M YR GR NM F
Sbjct: 444 RQGFMYP--PIGISQEWRHNMFPSSHNIQQIHSPIMRNTPRQYRNNRGRMNGNMMHFHHT 501
Query: 467 MGAGSMLPV--PVDMGAGIPRRDASVGQPMP---------------ITALSTA----LAN 505
+ + +P P + R+ S + +P I++L+ A LA
Sbjct: 502 V---NYVPHAQPAKEFMSMSRQRFSHAKYIPNDVMANGLAIHHGDSISSLNDAFNNLLAT 558
Query: 506 ASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAME 565
A PE+Q+ +LG LYPLVE+ D A+K+TGMLLE+ +EV+ LL S L AK+ E ++
Sbjct: 559 APPEEQKNMLGNRLYPLVERHHPDLASKITGMLLELGNSEVVMLLYSSNMLSAKIEECVK 618
Query: 566 VLRSVA----QQQANNPADQLASLSLNEN 590
+L+ V Q+A +P L S +N N
Sbjct: 619 LLQEVKPKPEDQEALHPGFLLDSAGVNAN 647
>gi|116202083|ref|XP_001226853.1| hypothetical protein CHGG_08926 [Chaetomium globosum CBS 148.51]
gi|121932498|sp|Q2GSX8.1|PABP_CHAGB RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|88177444|gb|EAQ84912.1| hypothetical protein CHGG_08926 [Chaetomium globosum CBS 148.51]
Length = 783
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 223/480 (46%), Positives = 310/480 (64%), Gaps = 62/480 (12%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVG+LD +VT++ L++LFSQ+G V S+RVCRD TRRSLGY YVNY + +D +AL
Sbjct: 64 SASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDTITRRSLGYAYVNYNSTSDGEKAL 123
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LN+T + + RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++FGNILSCK
Sbjct: 124 EELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCK 183
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKT 206
+A D +G SKG+GFV +E E+A AI +N ML+N+K+V+VG+ + K++R++ +K
Sbjct: 184 VAQDENGNSKGYGFVHYETDEAAAQAIKHVNNMLLNEKKVYVGYHIPKKDRQSKFEEMKA 243
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
F N++VKN+ TDE+ + +F +YG +TS+ + RD +GKS+ FGFVNF + AAKAV
Sbjct: 244 NFTNIYVKNISLEATDEEFRDLFAKYGDVTSSSLARDSEGKSRGFGFVNFTTHECAAKAV 303
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
E LNGK+F ++ YVG+AQKK ERE+EL+ +E A E +K+QG+NLYIKNL D IDD+
Sbjct: 304 EELNGKEFRGQDLYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLADDIDDD 363
Query: 327 KLKELFSEFGTITSCKVMRDPS-------------------------------------- 348
KL+++FSE+G ITS KVMRD
Sbjct: 364 KLRQMFSEYGPITSAKVMRDAVTEGSAEEETEGKDKENKKEGEQAAEAEGEAEGAEKKTE 423
Query: 349 -------GISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQF 401
G SKG GFV FS P++A++A+AEMN +MI KPLYVA+AQRK+ R+ +L+A
Sbjct: 424 KKGDRRLGKSKGFGFVCFSNPDDATKAVAEMNQRMIEGKPLYVALAQRKDVRKNQLEASI 483
Query: 402 SQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPPQ----MPPRGHAYRYPLG 457
+ M + +GL QQ++ Q P P Q MPP G +P G
Sbjct: 484 QARNQLRMQQAA---------AQAGLPQQYM--QTPVYYAPGQQPNFMPPGGRGMPFPQG 532
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 50/75 (66%)
Query: 500 STALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAK 559
S A +P+QQ+ +LGE+L+P ++ L+ D A K+TGMLLEMD E+++LLE AL AK
Sbjct: 681 SQLTATNNPQQQKQILGENLFPKIQALQPDLAGKITGMLLEMDNAELVNLLEDEAALVAK 740
Query: 560 VAEAMEVLRSVAQQQ 574
V EAM V + Q
Sbjct: 741 VNEAMAVYDEYVKSQ 755
>gi|225678061|gb|EEH16345.1| polyadenylate-binding protein [Paracoccidioides brasiliensis Pb03]
Length = 755
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 252/557 (45%), Positives = 331/557 (59%), Gaps = 85/557 (15%)
Query: 15 PNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYG 74
PN +A + Q + SLYVG+LD +VT++ L++LFS +GQV S+RVCRD TRRSLGY
Sbjct: 41 PN--SAAPTNAQPHSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYA 98
Query: 75 YVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKAL 134
YVNY N AD RAL+ LN+T + K RIM+S RDP++RK+G GN+FIKNLD +ID+KAL
Sbjct: 99 YVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKAL 158
Query: 135 HDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFL 194
HDTF++FGNILSCK+A D G SKG+GFV +E E+A NAI +NGML+N+K+VFVGH +
Sbjct: 159 HDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHI 218
Query: 195 RKQERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGD-GKSKCF 251
K++R++ +K F NV+VKNL+ T+E+ +++F +YG ITSA + RD + GKS+ F
Sbjct: 219 AKKDRQSKFEEMKANFTNVYVKNLEPEVTNEEFRELFEKYGEITSASLSRDNETGKSRGF 278
Query: 252 GFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQG 311
GFVNF N D AA AVE LN K++ ++ YVG+AQKK ERE+EL+ Q E A E K+QG
Sbjct: 279 GFVNFVNHDSAAAAVEDLNDKEYKGQKLYVGRAQKKHEREEELRKQHEAARVEKASKYQG 338
Query: 312 LNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSG---------------------- 349
+NLY+KNL D IDDEKL++LF FG ITS +VMRD G
Sbjct: 339 VNLYVKNLTDDIDDEKLRDLFIGFGNITSARVMRDTIGDAGSESEKEKEASKDNKENVRE 398
Query: 350 ------------------------------ISKGSGF--VAFSTPEEASRALAEMNGKMI 377
+ K GF V FS P+EAS+A+ EMN +M+
Sbjct: 399 ETKKEAGGEDSAEKTDKAEKPDTKKPTDKKLGKSKGFGFVCFSNPDEASKAVTEMNQRMV 458
Query: 378 VSKPLYVAVAQRKEERRARLQAQF-------SQMRPVAMGPSVPPRMP--MYPPGPSGL- 427
KPLYVA+AQRK+ R+++L+A Q A G S P P YPPG G
Sbjct: 459 NGKPLYVALAQRKDVRKSQLEASIQARNTIRQQQVAAAAGMSQPFMQPAVYYPPGQQGFI 518
Query: 428 ---GQQ--FLYGQAPPAIIPPQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAG 482
Q+ + Q P ++P P G +YP G Q G LP P G G
Sbjct: 519 PANAQRGGMAFAQQPGMVLPGM--PGGRPGQYPGGFPQQGGRGLAGPNQQLP-PNAFGLG 575
Query: 483 IPRRDASVGQPMPITAL 499
Q +PI AL
Sbjct: 576 --------AQGLPIGAL 584
>gi|295674319|ref|XP_002797705.1| polyadenylate-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226280355|gb|EEH35921.1| polyadenylate-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 822
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 251/559 (44%), Positives = 331/559 (59%), Gaps = 95/559 (16%)
Query: 19 AAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNY 78
+A + Q + SLYVG+LD +VT++ L++LFS +GQV S+RVCRD TRRSLGY YVNY
Sbjct: 43 SAAPTNAQPHSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNY 102
Query: 79 ANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTF 138
N AD RAL+ LN+T + K RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF
Sbjct: 103 NNTADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTF 162
Query: 139 SSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQE 198
++FGNILSCK+A D G SKG+GFV +E E+A NAI +NGML+N+K+VFVGH + K++
Sbjct: 163 AAFGNILSCKVAQDEFGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIAKKD 222
Query: 199 RETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGD-GKSKCFGFVN 255
R++ +K F NV+VKNL+ T+E+ +++F +YG ITSA + RD + GKS+ FGFVN
Sbjct: 223 RQSKFEEMKANFTNVYVKNLEPEVTNEEFRELFEKYGEITSASLSRDNETGKSRGFGFVN 282
Query: 256 FENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLY 315
F N D AA AVE LN K++ ++ YVG+AQKK ERE+EL+ Q E A E K+QG+NLY
Sbjct: 283 FVNHDSAAAAVEDLNDKEYKGQKLYVGRAQKKHEREEELRKQHEAARVEKASKYQGVNLY 342
Query: 316 IKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSG-------------------------- 349
+KNL D IDDEKL++LF FG ITS +VMRD G
Sbjct: 343 VKNLTDDIDDEKLRDLFIGFGNITSARVMRDTIGDAGSESEKEKEASKDNKENVKEETKK 402
Query: 350 --------------------------ISKGSGF--VAFSTPEEASRALAEMNGKMIVSKP 381
+ K GF V FS P+EAS+A+ EMN +M+ KP
Sbjct: 403 EAGGEDSAEKTDKAEKPDTKKPTDKKLGKSKGFGFVCFSNPDEASKAVTEMNQRMVNGKP 462
Query: 382 LYVAVAQRKEERRARLQAQF-------SQMRPVAMGPSVPPRMP--MYPPGPSGL----G 428
LYVA+AQRK+ R+++L+A Q A G S P P YPPG G
Sbjct: 463 LYVALAQRKDVRKSQLEASIQARNTIRQQQVAAAAGMSQPFMQPAVYYPPGQQGFIPANA 522
Query: 429 QQ--FLYGQAPPAIIPPQMPPRGHAYRYPLGRNMQDFPFDMGAG------SMLPVPVDMG 480
Q+ + Q P ++P P G +YP G FP G G + P MG
Sbjct: 523 QRGGMAFAQQPGMVLPGM--PGGRPGQYPGG-----FPQQGGRGLAGPNQQLPPNAFGMG 575
Query: 481 AGIPRRDASVGQPMPITAL 499
A Q +PI AL
Sbjct: 576 A----------QGLPIGAL 584
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 46/65 (70%)
Query: 502 ALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVA 561
A + A P QQ+ +LGE++YP ++ + + A K+TGMLLEMD E+L L++ AL+AKV
Sbjct: 701 AFSAAPPAQQKQMLGEAIYPKIQVQQPELAGKITGMLLEMDNAELLSLVDDDAALRAKVD 760
Query: 562 EAMEV 566
EA+ V
Sbjct: 761 EAINV 765
>gi|291227649|ref|XP_002733794.1| PREDICTED: polyadenylate-binding protein 1-like [Saccoglossus
kowalevskii]
Length = 655
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 212/384 (55%), Positives = 284/384 (73%), Gaps = 5/384 (1%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
SG + SLYVGDL +VT++ L++ FS G +LS+RVCRD+ TRRSLGY YVN+ PA
Sbjct: 4 SGPSYPMASLYVGDLHNDVTEAMLFEKFSSAGPILSIRVCRDMITRRSLGYAYVNFQQPA 63
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
DA RALD +NF + + IRIM+S RDPS+RKSG GN+FIKNLDKSID+KA++DTFS+FG
Sbjct: 64 DAERALDSMNFDVIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 123
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 202
+ILSCK+ D +G SKG+GFV F +E+A +I+K+NGML+N K+V+VG F+ ++ER
Sbjct: 124 DILSCKVVCDENG-SKGYGFVHFATEEAANKSIEKVNGMLLNGKKVYVGKFMSRKERYDA 182
Query: 203 --AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENA 259
+ KF NVFVKN + DE L+++F YG I S VM+D G++K FGFV FE+
Sbjct: 183 MGGQQKKFTNVFVKNFGDELDDEGLREMFERYGKIVSHKVMQDDHSGRNKGFGFVCFEDP 242
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
DA A + LN K + R YVG+AQKK ER+ EL+ +FE E +++QG+NLY+KNL
Sbjct: 243 IDAENACDDLNMKDINGRILYVGRAQKKIERQAELRNRFELMKAERANRYQGVNLYVKNL 302
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
DS+DDE+L++ F FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +
Sbjct: 303 DDSLDDERLRKEFMPFGTITSAKVMSE-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVST 361
Query: 380 KPLYVAVAQRKEERRARLQAQFSQ 403
KPLYVA+AQRKE+R+A L +QF Q
Sbjct: 362 KPLYVALAQRKEDRKAHLASQFMQ 385
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 103/299 (34%), Positives = 166/299 (55%), Gaps = 17/299 (5%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFEN 167
+PS ++++ +L + L + FSS G ILS ++ D + +S G+ +V F+
Sbjct: 2 NPSGPSYPMASLYVGDLHNDVTEAMLFEKFSSAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
A+ A+D +N +I + + + +R+ K+ NVF+KNLD+S ++ +
Sbjct: 62 PADAERALDSMNFDVIKGRPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKAMYD 117
Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
F +G I S V+ D +G SK +GFV+F + A K++E +NG + ++ YVGK +
Sbjct: 118 TFSAFGDILSCKVVCDENG-SKGYGFVHFATEEAANKSIEKVNGMLLNGKKVYVGKFMSR 176
Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
ER + GQ + KF N+++KN GD +DDE L+E+F +G I S KVM+D
Sbjct: 177 KERYDAMGGQQK--------KF--TNVFVKNFGDELDDEGLREMFERYGKIVSHKVMQDD 226
Query: 348 -SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
SG +KG GFV F P +A A ++N K I + LYV AQ+K ER+A L+ +F M+
Sbjct: 227 HSGRNKGFGFVCFEDPIDAENACDDLNMKDINGRILYVGRAQKKIERQAELRNRFELMK 285
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 69/105 (65%), Gaps = 3/105 (2%)
Query: 484 PRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQ 543
P++ V P+T S+ LA A P++Q+ +LGE L+PL++ + A K+TGMLLE+D
Sbjct: 552 PQQSVQVPGQEPLT--SSMLAAAPPQEQKQMLGERLFPLIQLTHGELAGKITGMLLEIDN 609
Query: 544 TEVLHLLESPEALKAKVAEAMEVLRS-VAQQQANNPADQLASLSL 587
+E+LH+LES E+L AKV EA+ VL++ A++ P ++ SL
Sbjct: 610 SELLHMLESRESLNAKVEEAVAVLKAHQAKETTVKPGTEIKPPSL 654
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 65/124 (52%), Gaps = 3/124 (2%)
Query: 2 AQIQVQHQAQMSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRV 61
AQ +++ QA++ + N++ +LYV +LD ++ D +L F G + S +V
Sbjct: 267 AQKKIERQAELRNRFELMKAERANRYQGVNLYVKNLDDSLDDERLRKEFMPFGTITSAKV 326
Query: 62 CRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIF 121
+ RS G+G+V +++P +A +A+ +N ++ K + + + R RK+ + F
Sbjct: 327 MSEGG--RSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALAQRKED-RKAHLASQF 383
Query: 122 IKNL 125
++ +
Sbjct: 384 MQRM 387
>gi|170574509|ref|XP_001892845.1| polyadenylate-binding protein 4 [Brugia malayi]
gi|158601405|gb|EDP38326.1| polyadenylate-binding protein 4, putative [Brugia malayi]
Length = 462
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 218/402 (54%), Positives = 288/402 (71%), Gaps = 5/402 (1%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL +VT++ L++ FS G VLS+RVCRD TRRSLGY YVN+ PADA RALD
Sbjct: 19 SLYVGDLHPDVTEAMLFEKFSSAGPVLSIRVCRDAITRRSLGYAYVNFQQPADAERALDT 78
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF + K IRIM+S RDPS+R+SG GNIFIKNLDKSID+KA++DTFS FGNILSCK+A
Sbjct: 79 MNFDMMYGKPIRIMWSQRDPSMRRSGAGNIFIKNLDKSIDNKAIYDTFSMFGNILSCKVA 138
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQE--RETVAIKTKF 208
D SKG+GFV FE +ESAQ AI+K+NGML+ K+V+VG F + RE +F
Sbjct: 139 NDEELNSKGYGFVHFETEESAQKAIEKVNGMLLEGKKVYVGKFQPRMARLREMGETTRRF 198
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NV++KN + E L+K+F ++G ITSA VM D DGKSK FGFV FEN +DA KAV
Sbjct: 199 TNVYIKNFADELDKEALEKLFFKFGKITSAAVMVDADGKSKGFGFVAFENPEDAEKAVTE 258
Query: 269 LNGKKF--DDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
++ + +R+ YV +AQKK+ER ELK ++EQ E + ++QG+NLY+KNL D+++D+
Sbjct: 259 MHEYELPGTERKLYVCRAQKKNERSAELKRRYEQQKVERMQRYQGVNLYVKNLDDTVNDD 318
Query: 327 KLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 386
LK+ F +G ITS KVM D +G SKG GFV F P+EA++A+ EMNGKM+ +KPLYVA+
Sbjct: 319 ILKQNFEAYGKITSAKVMCDDNGRSKGFGFVCFEKPDEATKAVTEMNGKMMCTKPLYVAL 378
Query: 387 AQRKEERRARLQAQFSQ-MRPVAMGPSVPPRMPMYPPGPSGL 427
AQRKE+R+A+L +Q+ Q + + M + +Y PG G
Sbjct: 379 AQRKEDRKAQLASQYMQRLASIRMHNAGTMHGTVYTPGTGGF 420
>gi|115452253|ref|NP_001049727.1| Os03g0278500 [Oryza sativa Japonica Group]
gi|108707490|gb|ABF95285.1| polyadenylate binding protein, types 1, 2, 3, 4 family protein,
expressed [Oryza sativa Japonica Group]
gi|113548198|dbj|BAF11641.1| Os03g0278500 [Oryza sativa Japonica Group]
gi|215678518|dbj|BAG92173.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222624669|gb|EEE58801.1| hypothetical protein OsJ_10348 [Oryza sativa Japonica Group]
Length = 647
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 254/627 (40%), Positives = 360/627 (57%), Gaps = 57/627 (9%)
Query: 17 GVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYV 76
V A A G +LYVGDL +V + L ++F ++G + SVRVCRD +T SL YGYV
Sbjct: 25 AVPAVAGGLNATVPALYVGDLHESVREEHLLEVFGKIGTLTSVRVCRDNATSNSLRYGYV 84
Query: 77 NYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHD 136
NY + ADAA AL+ LN + + +K IR+M+S+RDP R+SG GN+F+KNL+ +D+ +L +
Sbjct: 85 NYLSQADAAIALEKLNHSLILDKPIRVMWSNRDPDARRSGVGNVFVKNLNDLVDNVSLQE 144
Query: 137 TFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRK 196
F FG+ILSCK+A + G S+G+GFVQF +ESA +I LN +Q+ V F++K
Sbjct: 145 LFCKFGDILSCKVAKNEDGTSRGYGFVQFALQESADASIQNLNNSHFCGRQLHVATFIKK 204
Query: 197 QERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNF 256
ER T K+ N+++KNLD+ T+E +K F +YG + S +M+ DG SK FGFV+F
Sbjct: 205 SERSTNN-DDKYTNLYMKNLDDDITEELIKLKFSQYGLVISVKIMKRDDGTSKGFGFVSF 263
Query: 257 ENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYI 316
+N + A +A E++NG + YV +AQKK+ER+Q L+ E+ E + K G N+YI
Sbjct: 264 QNPESAKRAKESMNGMLLGSKTLYVARAQKKAERKQYLQRLHEEKRNEIITKSNGSNVYI 323
Query: 317 KNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKM 376
KN+ D + D+ L+E F+EFG ITS K+MRD GISKG GFV ++TPEEA A++ M G M
Sbjct: 324 KNINDEVGDDALRERFNEFGNITSAKIMRDEKGISKGFGFVCYNTPEEAKCAVSNMRGVM 383
Query: 377 IVSKPLYVAVAQRKEERRARLQAQFSQMRPV--AMGPSVPPRMP---------------- 418
KPLYVA+AQRKEERRA+L+ +F+++ + A P +P P
Sbjct: 384 FYGKPLYVAIAQRKEERRAKLEQRFAELATMVGATSPVIPTGYPQFYFAHPSTHLPQSPG 443
Query: 419 ----MYPPGPSGLGQQFLYGQAPPA-----IIPPQMPPRGHAYRYPLGR---NMQDF--- 463
MYP P G+ Q++ + P + I P M YR GR NM F
Sbjct: 444 RQGFMYP--PIGISQEWRHNMFPSSHNIQQIHSPIMRNTPRQYRNNRGRMNGNMMHFHHT 501
Query: 464 ----PFDMGAGSMLP-----------VPVD-MGAGIPRRDASVGQPMPITALSTALANAS 507
P A + +P D M G+ M A + LA A
Sbjct: 502 VNYVPHAQPAKEFMSMSRQRFSHAKYIPNDIMANGLAIHHGDSISSMN-DAFNNLLATAP 560
Query: 508 PEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVL 567
PE+Q+ +LG LYPLVE+ D A+K+TGMLLE+ +EV+ LL S L AK+ E +++L
Sbjct: 561 PEEQKNMLGNRLYPLVERHHPDLASKITGMLLELGNSEVVMLLYSSNMLSAKIEECVKLL 620
Query: 568 RSVA----QQQANNPADQLASLSLNEN 590
+ V Q+A +P L S +N N
Sbjct: 621 QEVKPKPEDQEALHPGFLLDSAGVNAN 647
>gi|452984370|gb|EME84127.1| hypothetical protein MYCFIDRAFT_202901 [Pseudocercospora fijiensis
CIRAD86]
Length = 715
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 227/489 (46%), Positives = 305/489 (62%), Gaps = 69/489 (14%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVG+LD +VT++ L++LFS +GQV S+RVCRD TRRSLGY YVNY + AD RAL
Sbjct: 54 SASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSAADGERAL 113
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LN+T + K RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++FGNILSCK
Sbjct: 114 EELNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDTFAAFGNILSCK 173
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKT 206
+A D G SKG+GFV +E ++A AI +NGML+N+K+VFVGH + K++R + +K
Sbjct: 174 VAVDEHGNSKGYGFVHYETSDAANQAIKSVNGMLLNEKKVFVGHHIPKKDRMSKFEEMKA 233
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
F N++VKN+D TTD++ +++F +YG ITSA + D GK + FGFVNF +DAAKAV
Sbjct: 234 NFTNIYVKNIDAETTDDEFRELFEKYGQITSASLAHDDQGKVRGFGFVNFIRHEDAAKAV 293
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
+ LN F ++ YVG+AQKK ERE+EL+ Q+E +E K+QG+NLY+KNL D IDDE
Sbjct: 294 DELNDLDFKGQKLYVGRAQKKHEREEELRKQYEAQRQEKSAKYQGVNLYVKNLADEIDDE 353
Query: 327 KLKELFSEFGTITSCKVMRDPS-------------------------------------- 348
+L+++F +G ITS KVMRD +
Sbjct: 354 ELRKIFEPYGAITSAKVMRDTTPLDKVEGAEKEDGEKKESESSAEDKEEEKKDDADELAK 413
Query: 349 --------------GISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERR 394
G SKG GFV FS P+EA++A+ E+N KMI SKPLYVA+AQRKE R+
Sbjct: 414 KLDTVTIGGEKKVLGKSKGFGFVCFSNPDEATKAVTELNQKMIHSKPLYVALAQRKEVRK 473
Query: 395 ARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPPQMPPRGHAYRY 454
++L+A V M GL QQF+ APP + + P G
Sbjct: 474 SQLEASIQARNQVRMQQQAT---------AGGLPQQFM---APPQMF---IGPNGQPMMI 518
Query: 455 PLGRNMQDF 463
P GR F
Sbjct: 519 PGGRGQMPF 527
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 156/300 (52%), Gaps = 21/300 (7%)
Query: 110 PSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENK 168
P+ + ++++ LD S+ L + FSS G + S ++ D + +S G+ +V + +
Sbjct: 47 PTNANPNSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSA 106
Query: 169 ESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKI 228
+ A+++LN LI K + +R+ KT NVF+KNLD + ++ L
Sbjct: 107 ADGERALEELNYTLIKGKPCRI----MWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDT 162
Query: 229 FGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKS 288
F +G I S V D G SK +GFV++E +D A +A++++NG ++++ +VG K
Sbjct: 163 FAAFGNILSCKVAVDEHGNSKGYGFVHYETSDAANQAIKSVNGMLLNEKKVFVGHHIPKK 222
Query: 289 ERE---QELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMR 345
+R +E+K F N+Y+KN+ D++ +ELF ++G ITS +
Sbjct: 223 DRMSKFEEMKANF-------------TNIYVKNIDAETTDDEFRELFEKYGQITSASLAH 269
Query: 346 DPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
D G +G GFV F E+A++A+ E+N + LYV AQ+K ER L+ Q+ R
Sbjct: 270 DDQGKVRGFGFVNFIRHEDAAKAVDELNDLDFKGQKLYVGRAQKKHEREEELRKQYEAQR 329
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 486 RDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTE 545
R A+ G P L+ AL A P QQ+ +LGE+LYP + + + A K+TGMLLEMD E
Sbjct: 653 RAANRGAAGPGIDLA-ALGAAPPPQQKQMLGEALYPKIHAQQPELAGKITGMLLEMDNEE 711
Query: 546 VLHL 549
+++L
Sbjct: 712 LINL 715
>gi|195584475|ref|XP_002082032.1| GD11341 [Drosophila simulans]
gi|194194041|gb|EDX07617.1| GD11341 [Drosophila simulans]
Length = 379
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 217/374 (58%), Positives = 280/374 (74%), Gaps = 3/374 (0%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL +V +S L+D FS G VLS+RVCRD+ TRRSLGY YVN+ PADA RALD
Sbjct: 3 SLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALDT 62
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF + NK IRIM+S RDPS+R+SG GN+FIKNLD++ID+KA++DTFS+FGNILSCK+A
Sbjct: 63 MNFDLVRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDRAIDNKAIYDTFSAFGNILSCKVA 122
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET-VAIKTK-F 208
TD G SKG+GFV FE +E+A +IDK+NGML+N K+V+VG F+ ++ERE + K K F
Sbjct: 123 TDEKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLF 182
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NV+VKN E DE LK+ F YG ITS VM DGKSK FGFV FE + A AV+A
Sbjct: 183 TNVYVKNFTEDFDDEKLKEFFEPYGKITSYKVMSKEDGKSKGFGFVAFETTEAAEAAVQA 242
Query: 269 LNGKKF-DDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEK 327
LNGK + + YV +AQKK+ER+QELK +FE+ ++ + G+NLY+KNL D+IDD++
Sbjct: 243 LNGKDMGEGKSLYVARAQKKAERQQELKRKFEELKQKRHESVFGVNLYVKNLDDTIDDDR 302
Query: 328 LKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 387
L+ FS +G ITS KVM D G SKG GFV F+ EA+ A+ E+NG+++ SKPLYVA+A
Sbjct: 303 LRIAFSPYGNITSAKVMTDEEGRSKGFGFVCFNAASEATCAVTELNGRVVGSKPLYVALA 362
Query: 388 QRKEERRARLQAQF 401
QRKEER+A L +Q+
Sbjct: 363 QRKEERKAHLASQY 376
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 105/289 (36%), Positives = 164/289 (56%), Gaps = 16/289 (5%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDK 177
++++ +L + ++ L D FSS G +LS ++ D + +S G+ +V F+ A+ A+D
Sbjct: 3 SLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALDT 62
Query: 178 LNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITS 237
+N L+ +K + + +R+ ++ NVF+KNLD + ++ + F +G I S
Sbjct: 63 MNFDLVRNKPIRIMW----SQRDPSLRRSGVGNVFIKNLDRAIDNKAIYDTFSAFGNILS 118
Query: 238 AVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQ 297
V D G SK +GFV+FE + A +++ +NG + ++ YVGK + ERE+EL
Sbjct: 119 CKVATDEKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKEREKELG-- 176
Query: 298 FEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFV 357
E+A T N+Y+KN + DDEKLKE F +G ITS KVM G SKG GFV
Sbjct: 177 -EKAKLFT-------NVYVKNFTEDFDDEKLKEFFEPYGKITSYKVMSKEDGKSKGFGFV 228
Query: 358 AFSTPEEASRALAEMNGK-MIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
AF T E A A+ +NGK M K LYVA AQ+K ER+ L+ +F +++
Sbjct: 229 AFETTEAAEAAVQALNGKDMGEGKSLYVARAQKKAERQQELKRKFEELK 277
>gi|431894424|gb|ELK04224.1| Polyadenylate-binding protein 1-like protein [Pteropus alecto]
Length = 512
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 217/391 (55%), Positives = 288/391 (73%), Gaps = 11/391 (2%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
ASG F SLYVGDL +VT++ LY+ FS G +LS+RVCRD++TRRSLGY Y+N+ P
Sbjct: 3 ASGPIFPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + + IRIM+S RDP +RKSG GNIFIKNL+ SID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFEVIKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D G S+GFGFV FE E+AQ AI +NGML+ND++VFVGHF +QERE
Sbjct: 123 GNILSCKVVCDDHG-SRGFGFVHFETHEAAQLAISTMNGMLLNDRKVFVGHFKSRQEREA 181
Query: 202 V--AIKTKFNNVFVKNLDESTTDEDLKKIFGEY-----GTITSAVVMRDGDGKSKCFGFV 254
A +F N++VKNL + L+++F ++ G + S VMRD G S+ FGFV
Sbjct: 182 ELGARAMEFTNIYVKNLQVDMDEWGLQELFSQFDWSSPGKMLSVKVMRDDSGHSRGFGFV 241
Query: 255 NFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKF--QGL 312
NFE ++A KAV +NGK+ R YVG+AQK+ ER+ ELK +FEQ ++ ++++ +G+
Sbjct: 242 NFEKHEEAQKAVMDMNGKEVRGRLLYVGRAQKRMERQNELKRKFEQMKQDRLNRYHVRGV 301
Query: 313 NLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEM 372
NLY+KNL DSI+DEKL++ FS +G ITS KVM + G SKG GFV FS+PEEA++A+ EM
Sbjct: 302 NLYVKNLDDSINDEKLRKEFSPYGMITSAKVMTE-GGHSKGFGFVCFSSPEEATKAVTEM 360
Query: 373 NGKMIVSKPLYVAVAQRKEERRARLQAQFSQ 403
NG+++ +KPLYVA+AQRKEER+A L Q+ Q
Sbjct: 361 NGRIVGTKPLYVALAQRKEERKAILTNQYMQ 391
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 106/299 (35%), Positives = 163/299 (54%), Gaps = 32/299 (10%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRV-CRDLSTRRSLGYGYVNYANPADAARALD 89
++++ +L+ ++ + LYD FS G +LS +V C D +R G+G+V++ A A+
Sbjct: 100 NIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDDHGSR---GFGFVHFETHEAAQLAIS 156
Query: 90 VLNFTPLNNKSIRIMY----SHRDPSI--RKSGTGNIFIKNLDKSIDHKALHDTFSSF-- 141
+N LN++ + + + R+ + R NI++KNL +D L + FS F
Sbjct: 157 TMNGMLLNDRKVFVGHFKSRQEREAELGARAMEFTNIYVKNLQVDMDEWGLQELFSQFDW 216
Query: 142 ---GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQE 198
G +LS K+ D SG S+GFGFV FE E AQ A+ +NG + + ++VG ++ E
Sbjct: 217 SSPGKMLSVKVMRDDSGHSRGFGFVNFEKHEEAQKAVMDMNGKEVRGRLLYVGRAQKRME 276
Query: 199 RETVAIKTKFN---------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD 243
R+ +K KF N++VKNLD+S DE L+K F YG ITSA VM +
Sbjct: 277 RQN-ELKRKFEQMKQDRLNRYHVRGVNLYVKNLDDSINDEKLRKEFSPYGMITSAKVMTE 335
Query: 244 GDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAM 302
G G SK FGFV F + ++A KAV +NG+ + YV AQ+K ER+ L Q+ Q +
Sbjct: 336 G-GHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEERKAILTNQYMQRL 393
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/293 (34%), Positives = 167/293 (56%), Gaps = 21/293 (7%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATD-GSGQSKGFGFVQFENKESAQNAIDK 177
++++ +L + L++ FS G ILS ++ D + +S G+ ++ F+ A+ A+D
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 178 LNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITS 237
+N +I + + + +R+ K+ N+F+KNL++S ++ L F +G I S
Sbjct: 72 MNFEVIKGQPIRI----MWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILS 127
Query: 238 AVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQ 297
V+ D G S+ FGFV+FE + A A+ +NG +DR+ +VG + + ERE EL +
Sbjct: 128 CKVVCDDHG-SRGFGFVHFETHEAAQLAISTMNGMLLNDRKVFVGHFKSRQEREAELGAR 186
Query: 298 FEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEF-----GTITSCKVMRDPSGISK 352
AM+ T N+Y+KNL +D+ L+ELFS+F G + S KVMRD SG S+
Sbjct: 187 ---AMEFT-------NIYVKNLQVDMDEWGLQELFSQFDWSSPGKMLSVKVMRDDSGHSR 236
Query: 353 GSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
G GFV F EEA +A+ +MNGK + + LYV AQ++ ER+ L+ +F QM+
Sbjct: 237 GFGFVNFEKHEEAQKAVMDMNGKEVRGRLLYVGRAQKRMERQNELKRKFEQMK 289
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 47/67 (70%), Gaps = 2/67 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A +Q+ ++GE LYPL+ + A K+TGMLLE+D +E+L +LESPE
Sbjct: 433 PLTA--SMLAAAPLHEQKQMIGERLYPLIYDVHTQLAGKITGMLLEIDNSELLLMLESPE 490
Query: 555 ALKAKVA 561
+L AKV
Sbjct: 491 SLNAKVG 497
>gi|154322853|ref|XP_001560741.1| hypothetical protein BC1G_00769 [Botryotinia fuckeliana B05.10]
gi|347837080|emb|CCD51652.1| similar to polyadenylate-binding protein [Botryotinia fuckeliana]
Length = 790
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 237/532 (44%), Positives = 328/532 (61%), Gaps = 86/532 (16%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVG+LD +VT++ L++LFSQ+G V S+RVCRD +RRSLGY YVNY AD +AL
Sbjct: 60 SASLYVGELDTSVTEAMLFELFSQIGSVASIRVCRDAISRRSLGYAYVNYNTTADGEKAL 119
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LN+T + + RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++FGNILSCK
Sbjct: 120 EELNYTLIKGRPCRIMWSQRDPALRKNGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCK 179
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKT 206
+A D SG SKG+GFV +E E+A AI +NGML+N+K+VFVGH + K++R++ +K
Sbjct: 180 VAQDESGASKGYGFVHYETDEAAAQAIKHVNGMLLNEKKVFVGHHIPKKDRQSKFEEMKA 239
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGD-GKSKCFGFVNFENADDAAKA 265
F N++VKN+ T+E+ +++F ++G +TSA + RD + GKS+ FGFVNF N + AA A
Sbjct: 240 NFTNIYVKNIPVEATEEEFRELFEKFGDVTSASLARDAETGKSRGFGFVNFINHEHAATA 299
Query: 266 VEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDD 325
V+ LNGK F ++ YVG+AQKK ERE+EL+ +E A E K+QG+NLY+KNL D IDD
Sbjct: 300 VDELNGKDFKGQDLYVGRAQKKHEREEELRRSYEAARIEKASKYQGVNLYVKNLDDDIDD 359
Query: 326 EKLKELFSEFGTITSCKVMRD-PS------------------------------------ 348
EKL+ELF FG+ITS KVMRD P+
Sbjct: 360 EKLRELFQSFGSITSAKVMRDTPAETAEAEEKKEKDEEKNKENKDTKETKETKKEGEAET 419
Query: 349 ------------GISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRAR 396
G SKG GFV F+ P+EA++A+++MN +M+ +KPLYVA+AQRK+ R+++
Sbjct: 420 EEASAPKAKRSLGKSKGFGFVCFNNPDEATKAVSDMNQRMVNNKPLYVALAQRKDVRKSQ 479
Query: 397 LQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQA--PPAIIPPQMPPRGHAYRY 454
L+A + M + +G+ QQ++ PP P P+G
Sbjct: 480 LEASIQARNQIRMQQAA---------AQAGMPQQYMQAPMFFPPGAQQPGFLPQG----- 525
Query: 455 PLGRNMQDFPFDMGAGSMLPVPVDMG-------AGIP----RRDASVGQPMP 495
GR MQ FP G +P+P G AG P R A GQ MP
Sbjct: 526 --GRGMQ-FPPQAG----MPIPGAQGGRPGQFQAGFPPQQAGRGAPAGQQMP 570
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 86/163 (52%), Gaps = 14/163 (8%)
Query: 406 PVAMGP--SVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPPQMPPRGHAYRYPLGRNMQDF 463
P A GP +PP M M P G G+ QF G MP RG P G+ F
Sbjct: 611 PNARGPMQGMPPNMAM-PMGQQGM-PQFQQGARQGG-----MPGRGAQAGRP-GQFAGGF 662
Query: 464 PFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLV 523
P G G +P + IP+ G +P T L + +P+QQ+ +LGE+L+P +
Sbjct: 663 PPQAGRG--MPQQIPGMQQIPQMAQEGG--VPATMLQAQVQAVAPQQQKQILGEALFPKI 718
Query: 524 EQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEV 566
+ L+ + A K+TGMLLEM+ E+++L+E +L+AKV EA+ V
Sbjct: 719 QVLQPELAGKITGMLLEMENQELINLIEDDASLRAKVDEALTV 761
>gi|357510891|ref|XP_003625734.1| Polyadenylate binding protein [Medicago truncatula]
gi|355500749|gb|AES81952.1| Polyadenylate binding protein [Medicago truncatula]
Length = 613
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 260/598 (43%), Positives = 363/598 (60%), Gaps = 64/598 (10%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL +++DSQL+D FS + SVR+CRD S+ +SL YGYVN+ +P DA RA++V
Sbjct: 11 SLYVGDLHPDLSDSQLHDAFSDFKTLASVRICRDSSSGKSLCYGYVNFLSPHDAIRAIEV 70
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
N + LN K+IR+M+S RDP RKS GN+F+KNL +SID+ L D F FGNILS K+
Sbjct: 71 KNHSTLNGKAIRVMWSRRDPDARKSCIGNVFVKNLAESIDNSGLEDMFKKFGNILSSKVV 130
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNN 210
G+SKG+GFVQFE +ESA AI++LNG L+ DKQ++VG F++K +R + T++ N
Sbjct: 131 MSEDGKSKGYGFVQFETEESANAAIERLNGYLVGDKQIYVGKFVKKSDRISSGPDTRYTN 190
Query: 211 VFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALN 270
+++KNLD ++ L++ F +G I S V +D +G SK FGFVNF+N +DA +A+E +N
Sbjct: 191 LYMKNLDLDISETLLREKFSSFGKIISLAVAKDSNGMSKGFGFVNFDNPEDAKRAMETMN 250
Query: 271 GKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKE 330
G + + YV +AQKK+EREQ L QFE+ KE V K++G N+Y+KN+ D++ DE L++
Sbjct: 251 GLQLGSKILYVARAQKKAEREQILHQQFEEKRKEQVLKYKGSNIYVKNIDDNVSDEGLRD 310
Query: 331 LFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRK 390
FS GTITS K+MRD GISKG GFV FSTPEEA++A+ +G M KPLYV++AQRK
Sbjct: 311 HFSVCGTITSAKIMRDDKGISKGFGFVCFSTPEEANKAVNSFHGFMFHGKPLYVSLAQRK 370
Query: 391 EERRARLQAQFSQMRPVAMGPS---VPPRMP----------MYPPGPSGLGQQFLY---- 433
E+R+A+LQ Q++Q GPS VP P + P +GL Q +
Sbjct: 371 EDRQAQLQLQYAQQIAGLAGPSTAIVPGGYPPFYYTATGVVSHAPPRAGLVYQPMALRPG 430
Query: 434 ----GQAPPAIIPPQMPP------RGHAYRYPLGRNMQDFPFDMG---AGSMLPVPVDMG 480
G APPA Q P +R GR M G +G+ +P
Sbjct: 431 WRANGSAPPARSFQQSPTPVVSNNNTRQHRQNRGR-MNGHAVSQGNTHSGTYMPQAQQAS 489
Query: 481 -AGIPRRDASV----GQPMPITA-----------------------LSTALANASPEQQR 512
+ I R++S GQ + + L + LANA+PEQQ+
Sbjct: 490 QSAISSRESSTQQRTGQAKYVPSGRHREMEKGSGLSSSGGSLGPEVLHSMLANATPEQQK 549
Query: 513 TLLGESLYPLVEQLERDAAAKVTGMLLEMDQT-EVLHLLESPEALKAKVAEAMEVLRS 569
+LGE LY LV++++ + AAK+TGMLLEMD E +L++ KAKV+ +VL S
Sbjct: 550 EILGEHLYMLVQKIKPNLAAKITGMLLEMDNVEEAFQVLKNS---KAKVS-GQDVLHS 603
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 105/194 (54%), Gaps = 17/194 (8%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
+SG T+LY+ +LD +++++ L + FS G+++S+ V +D S S G+G+VN+ NP
Sbjct: 181 SSGPDTRYTNLYMKNLDLDISETLLREKFSSFGKIISLAVAKD-SNGMSKGFGFVNFDNP 239
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSH----------------RDPSIRKSGTGNIFIKNL 125
DA RA++ +N L +K + + + R + K NI++KN+
Sbjct: 240 EDAKRAMETMNGLQLGSKILYVARAQKKAEREQILHQQFEEKRKEQVLKYKGSNIYVKNI 299
Query: 126 DKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLIND 185
D ++ + L D FS G I S KI D G SKGFGFV F E A A++ +G + +
Sbjct: 300 DDNVSDEGLRDHFSVCGTITSAKIMRDDKGISKGFGFVCFSTPEEANKAVNSFHGFMFHG 359
Query: 186 KQVFVGHFLRKQER 199
K ++V RK++R
Sbjct: 360 KPLYVSLAQRKEDR 373
>gi|320591142|gb|EFX03581.1| polyadenylate-binding protein [Grosmannia clavigera kw1407]
Length = 780
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 214/458 (46%), Positives = 302/458 (65%), Gaps = 64/458 (13%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVG+LD +VT++ L++LFSQ+G V S+RVCRD TRRSLGY YVNY + AD +AL
Sbjct: 58 SASLYVGELDESVTEAMLFELFSQIGPVASIRVCRDAVTRRSLGYAYVNYNSTADGEKAL 117
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LN+T + N+ RIM+S RDP++RK+G GNIFIKNLD +ID+KALHDTF++FGNILSCK
Sbjct: 118 EELNYTLIKNRPCRIMWSQRDPALRKTGQGNIFIKNLDAAIDNKALHDTFAAFGNILSCK 177
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKT 206
+A D G SKG+GFV +E E+AQ AI +NGML+N+K+V+VGH + K++R++ +K
Sbjct: 178 VAQDEHGNSKGYGFVHYETDEAAQQAIKHVNGMLLNEKKVYVGHHIPKKDRQSKFEEMKA 237
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGD-GKSKCFGFVNFENADDAAKA 265
+ N+++KNL TD++ +K+F +YG +TS+ + RD + GKS+ FGF+NF + AAKA
Sbjct: 238 NYTNIYIKNLHADVTDDEFRKLFEQYGAVTSSTIARDQETGKSRGFGFINFTTHESAAKA 297
Query: 266 VEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDD 325
VE LN ++ +E YVG+AQKK ERE+EL+ +E A +E K+ G+NLYIKNL D +DD
Sbjct: 298 VEELNSREIHGQELYVGRAQKKHEREEELRKSYEAARQEKASKYVGVNLYIKNLDDEVDD 357
Query: 326 EKLKELFSEFGTITSCKVMRDPS------------------------------------- 348
EKL+ELF+ +G ITS KVMR+ +
Sbjct: 358 EKLRELFAPYGPITSAKVMRETASESDEEGKETKETEEVKEVKEEEEKPKVEGAAEGEAD 417
Query: 349 -------------GISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRA 395
G SKG GFV FS P++A++A+ EMN +M+ KPLYVA+AQ+KE R++
Sbjct: 418 ASGEKQAAARPKLGKSKGFGFVCFSNPDDATKAVTEMNQRMVSGKPLYVAIAQKKEVRKS 477
Query: 396 RLQAQFS-----QMRPVAMGPSVP-----PRMPMYPPG 423
+L+A +M+ A +P P++ YPPG
Sbjct: 478 QLEASIQARNTLRMQQAAAVAGLPQTYMQPQV-YYPPG 514
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Query: 505 NASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAM 564
N + +QQ+ +LGE+++P ++ + + A K+TGMLLEMD E++HL+E ALKAKV EA+
Sbjct: 693 NGNVQQQKQILGEAIFPKIQNFQPELAGKITGMLLEMDNQELVHLIEDESALKAKVDEAL 752
Query: 565 EVLRSVAQQQANNPADQ 581
V + + Q N PA++
Sbjct: 753 GVYQDYVKAQ-NVPAEE 768
>gi|73909065|gb|AAH45608.1| Poly(A) binding protein, cytoplasmic 3 [Homo sapiens]
Length = 631
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 209/379 (55%), Positives = 279/379 (73%), Gaps = 4/379 (1%)
Query: 27 FLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAAR 86
+ T SLYVGDL +VT++ LY+ FS G +LS+R+CRDL T S Y YVN+ + DA
Sbjct: 8 YPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDAEH 67
Query: 87 ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
ALD +NF + K +RIM+S RDPS+RKSG GNIF+KNLDKSI++KAL+DT S+FGNILS
Sbjct: 68 ALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILS 127
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AI 204
C + D +G SKG+GFV FE E+A+ AI K+NGML+N ++VFVG F ++ERE A
Sbjct: 128 CNVVCDENG-SKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKEREAELGAR 186
Query: 205 KTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAK 264
+F NV++KN E DE LK +FG++G S VM D GKSK FGFV+FE +DA K
Sbjct: 187 AKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQK 246
Query: 265 AVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSID 324
AV+ +NGK+ + ++ YVG+AQKK ER+ ELK FEQ ++ + ++Q +NLY+KNL D ID
Sbjct: 247 AVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGID 306
Query: 325 DEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYV 384
DE+L++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +KPLYV
Sbjct: 307 DERLRKAFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Query: 385 AVAQRKEERRARLQAQFSQ 403
A+AQRKEER+A L ++ Q
Sbjct: 366 ALAQRKEERQAYLTNEYMQ 384
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 112/290 (38%), Positives = 165/290 (56%), Gaps = 21/290 (7%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
+++V +LD ++ + LYD S G +LS V D + S GYG+V++ A RA+
Sbjct: 100 NIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENG--SKGYGFVHFETHEAAERAIKK 157
Query: 91 LNFTPLNNKSIRI----MYSHRDPSI--RKSGTGNIFIKNLDKSIDHKALHDTFSSFGNI 144
+N LN + + + R+ + R N++IKN + +D + L D F FG
Sbjct: 158 MNGMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPA 217
Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAI 204
LS K+ TD SG+SKGFGFV FE E AQ A+D++NG +N KQ++VG +K ER+T
Sbjct: 218 LSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELK 277
Query: 205 KT------------KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFG 252
+T + N++VKNLD+ DE L+K F +GTITSA VM +G G+SK FG
Sbjct: 278 RTFEQMKQDRITRYQVVNLYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEG-GRSKGFG 336
Query: 253 FVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAM 302
FV F + ++A KAV +NG+ + YV AQ+K ER+ L ++ Q M
Sbjct: 337 FVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAYLTNEYMQRM 386
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 110/299 (36%), Positives = 173/299 (57%), Gaps = 18/299 (6%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATD--GSGQSKGFGFVQFE 166
+PS T ++++ +L + L++ FS G ILS +I D SG S + +V F+
Sbjct: 2 NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSS-NYAYVNFQ 60
Query: 167 NKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLK 226
+ + A++A+D +N +I K V + +R+ K+ N+FVKNLD+S ++ L
Sbjct: 61 HTKDAEHALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFVKNLDKSINNKALY 116
Query: 227 KIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQK 286
+G I S V+ D +G SK +GFV+FE + A +A++ +NG + R+ +VG+ +
Sbjct: 117 DTVSAFGNILSCNVVCDENG-SKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKS 175
Query: 287 KSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRD 346
+ ERE EL + ++ N+YIKN G+ +DDE+LK+LF +FG S KVM D
Sbjct: 176 RKEREAELGARAKEFP----------NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD 225
Query: 347 PSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
SG SKG GFV+F E+A +A+ EMNGK + K +YV AQ+K ER+ L+ F QM+
Sbjct: 226 ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMK 284
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 62/83 (74%)
Query: 497 TALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEAL 556
T ++ LA+A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+L++LESPE+L
Sbjct: 539 TLTASRLASAPPQKQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLYMLESPESL 598
Query: 557 KAKVAEAMEVLRSVAQQQANNPA 579
++KV EA+ VL++ ++A A
Sbjct: 599 RSKVDEAVAVLQAHQAKEATQKA 621
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
++ +LYV +LD + D +L FS G + S +V + RS G+G+V +++P +A
Sbjct: 289 TRYQVVNLYVKNLDDGIDDERLRKAFSPFGTITSAKVM--MEGGRSKGFGFVCFSSPEEA 346
Query: 85 ARALDVLNFTPLNNKSIRIMYSHR 108
+A+ +N + K + + + R
Sbjct: 347 TKAVTEMNGRIVATKPLYVALAQR 370
>gi|45238849|ref|NP_112241.2| polyadenylate-binding protein 3 [Homo sapiens]
gi|28201852|sp|Q9H361.2|PABP3_HUMAN RecName: Full=Polyadenylate-binding protein 3; Short=PABP-3;
Short=Poly(A)-binding protein 3; AltName:
Full=Testis-specific poly(A)-binding protein
gi|20379668|gb|AAH27617.1| Poly(A) binding protein, cytoplasmic 3 [Homo sapiens]
gi|119628765|gb|EAX08360.1| poly(A) binding protein, cytoplasmic 3 [Homo sapiens]
gi|123982576|gb|ABM83029.1| poly(A) binding protein, cytoplasmic 3 [synthetic construct]
gi|123997243|gb|ABM86223.1| poly(A) binding protein, cytoplasmic 3 [synthetic construct]
gi|189055351|dbj|BAG36140.1| unnamed protein product [Homo sapiens]
Length = 631
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 209/379 (55%), Positives = 279/379 (73%), Gaps = 4/379 (1%)
Query: 27 FLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAAR 86
+ T SLYVGDL +VT++ LY+ FS G +LS+R+CRDL T S Y YVN+ + DA
Sbjct: 8 YPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDAEH 67
Query: 87 ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
ALD +NF + K +RIM+S RDPS+RKSG GNIF+KNLDKSI++KAL+DT S+FGNILS
Sbjct: 68 ALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILS 127
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AI 204
C + D +G SKG+GFV FE E+A+ AI K+NGML+N ++VFVG F ++ERE A
Sbjct: 128 CNVVCDENG-SKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKEREAELGAR 186
Query: 205 KTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAK 264
+F NV++KN E DE LK +FG++G S VM D GKSK FGFV+FE +DA K
Sbjct: 187 AKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQK 246
Query: 265 AVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSID 324
AV+ +NGK+ + ++ YVG+AQKK ER+ ELK FEQ ++ + ++Q +NLY+KNL D ID
Sbjct: 247 AVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGID 306
Query: 325 DEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYV 384
DE+L++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +KPLYV
Sbjct: 307 DERLRKAFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Query: 385 AVAQRKEERRARLQAQFSQ 403
A+AQRKEER+A L ++ Q
Sbjct: 366 ALAQRKEERQAYLTNEYMQ 384
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 112/290 (38%), Positives = 165/290 (56%), Gaps = 21/290 (7%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
+++V +LD ++ + LYD S G +LS V D + S GYG+V++ A RA+
Sbjct: 100 NIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENG--SKGYGFVHFETHEAAERAIKK 157
Query: 91 LNFTPLNNKSIRI----MYSHRDPSI--RKSGTGNIFIKNLDKSIDHKALHDTFSSFGNI 144
+N LN + + + R+ + R N++IKN + +D + L D F FG
Sbjct: 158 MNGMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPA 217
Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAI 204
LS K+ TD SG+SKGFGFV FE E AQ A+D++NG +N KQ++VG +K ER+T
Sbjct: 218 LSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELK 277
Query: 205 KT------------KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFG 252
+T + N++VKNLD+ DE L+K F +GTITSA VM +G G+SK FG
Sbjct: 278 RTFEQMKQDRITRYQVVNLYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEG-GRSKGFG 336
Query: 253 FVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAM 302
FV F + ++A KAV +NG+ + YV AQ+K ER+ L ++ Q M
Sbjct: 337 FVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAYLTNEYMQRM 386
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 110/299 (36%), Positives = 173/299 (57%), Gaps = 18/299 (6%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATD--GSGQSKGFGFVQFE 166
+PS T ++++ +L + L++ FS G ILS +I D SG S + +V F+
Sbjct: 2 NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSS-NYAYVNFQ 60
Query: 167 NKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLK 226
+ + A++A+D +N +I K V + +R+ K+ N+FVKNLD+S ++ L
Sbjct: 61 HTKDAEHALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFVKNLDKSINNKALY 116
Query: 227 KIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQK 286
+G I S V+ D +G SK +GFV+FE + A +A++ +NG + R+ +VG+ +
Sbjct: 117 DTVSAFGNILSCNVVCDENG-SKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKS 175
Query: 287 KSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRD 346
+ ERE EL + ++ N+YIKN G+ +DDE+LK+LF +FG S KVM D
Sbjct: 176 RKEREAELGARAKEF----------PNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD 225
Query: 347 PSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
SG SKG GFV+F E+A +A+ EMNGK + K +YV AQ+K ER+ L+ F QM+
Sbjct: 226 ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMK 284
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 62/83 (74%)
Query: 497 TALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEAL 556
T ++ LA+A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+L++LESPE+L
Sbjct: 539 TLTASRLASAPPQKQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLYMLESPESL 598
Query: 557 KAKVAEAMEVLRSVAQQQANNPA 579
++KV EA+ VL++ ++A A
Sbjct: 599 RSKVDEAVAVLQAHQAKEATQKA 621
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
++ +LYV +LD + D +L FS G + S +V + RS G+G+V +++P +A
Sbjct: 289 TRYQVVNLYVKNLDDGIDDERLRKAFSPFGTITSAKVM--MEGGRSKGFGFVCFSSPEEA 346
Query: 85 ARALDVLNFTPLNNKSIRIMYSHR 108
+A+ +N + K + + + R
Sbjct: 347 TKAVTEMNGRIVATKPLYVALAQR 370
>gi|82802749|gb|ABB92425.1| PABP3 [Homo sapiens]
Length = 630
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 209/379 (55%), Positives = 279/379 (73%), Gaps = 4/379 (1%)
Query: 27 FLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAAR 86
+ T SLYVGDL +VT++ LY+ FS G +LS+R+CRDL T S Y YVN+ + DA
Sbjct: 8 YPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDAEH 67
Query: 87 ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
ALD +NF + K +RIM+S RDPS+RKSG GNIF+KNLDKSI++KAL+DT S+FGNILS
Sbjct: 68 ALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILS 127
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AI 204
C + D +G SKG+GFV FE E+A+ AI K+NGML+N ++VFVG F ++ERE A
Sbjct: 128 CNVVCDENG-SKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKEREAELGAR 186
Query: 205 KTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAK 264
+F NV++KN E DE LK +FG++G S VM D GKSK FGFV+FE +DA K
Sbjct: 187 AKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQK 246
Query: 265 AVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSID 324
AV+ +NGK+ + ++ YVG+AQKK ER+ ELK FEQ ++ + ++Q +NLY+KNL D ID
Sbjct: 247 AVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGID 306
Query: 325 DEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYV 384
DE+L++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +KPLYV
Sbjct: 307 DERLRKAFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Query: 385 AVAQRKEERRARLQAQFSQ 403
A+AQRKEER+A L ++ Q
Sbjct: 366 ALAQRKEERQAYLTNEYMQ 384
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 112/290 (38%), Positives = 165/290 (56%), Gaps = 21/290 (7%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
+++V +LD ++ + LYD S G +LS V D + S GYG+V++ A RA+
Sbjct: 100 NIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENG--SKGYGFVHFETHEAAERAIKK 157
Query: 91 LNFTPLNNKSIRI----MYSHRDPSI--RKSGTGNIFIKNLDKSIDHKALHDTFSSFGNI 144
+N LN + + + R+ + R N++IKN + +D + L D F FG
Sbjct: 158 MNGMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPA 217
Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAI 204
LS K+ TD SG+SKGFGFV FE E AQ A+D++NG +N KQ++VG +K ER+T
Sbjct: 218 LSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELK 277
Query: 205 KT------------KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFG 252
+T + N++VKNLD+ DE L+K F +GTITSA VM +G G+SK FG
Sbjct: 278 RTFEQMKQDRITRYQVVNLYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEG-GRSKGFG 336
Query: 253 FVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAM 302
FV F + ++A KAV +NG+ + YV AQ+K ER+ L ++ Q M
Sbjct: 337 FVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAYLTNEYMQRM 386
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 110/299 (36%), Positives = 173/299 (57%), Gaps = 18/299 (6%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATD--GSGQSKGFGFVQFE 166
+PS T ++++ +L + L++ FS G ILS +I D SG S + +V F+
Sbjct: 2 NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSS-NYAYVNFQ 60
Query: 167 NKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLK 226
+ + A++A+D +N +I K V + +R+ K+ N+FVKNLD+S ++ L
Sbjct: 61 HTKDAEHALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFVKNLDKSINNKALY 116
Query: 227 KIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQK 286
+G I S V+ D +G SK +GFV+FE + A +A++ +NG + R+ +VG+ +
Sbjct: 117 DTVSAFGNILSCNVVCDENG-SKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKS 175
Query: 287 KSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRD 346
+ ERE EL + ++ N+YIKN G+ +DDE+LK+LF +FG S KVM D
Sbjct: 176 RKEREAELGARAKEF----------PNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD 225
Query: 347 PSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
SG SKG GFV+F E+A +A+ EMNGK + K +YV AQ+K ER+ L+ F QM+
Sbjct: 226 ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMK 284
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 62/83 (74%)
Query: 497 TALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEAL 556
T ++ LA+A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+L++LESPE+L
Sbjct: 539 TLTASRLASAPPQKQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLYMLESPESL 598
Query: 557 KAKVAEAMEVLRSVAQQQANNPA 579
++KV EA+ VL++ ++A A
Sbjct: 599 RSKVDEAVAVLQAHQAKEATQKA 621
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
++ +LYV +LD + D +L FS G + S +V + RS G+G+V +++P +A
Sbjct: 289 TRYQVVNLYVKNLDDGIDDERLRKAFSPFGTITSAKVM--MEGGRSKGFGFVCFSSPEEA 346
Query: 85 ARALDVLNFTPLNNKSIRIMYSHR 108
+A+ +N + K + + + R
Sbjct: 347 TKAVTEMNGRIVATKPLYVALAQR 370
>gi|11610605|gb|AAG38953.1|AF132026_1 testis-specific poly(A)-binding protein [Homo sapiens]
Length = 631
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 209/379 (55%), Positives = 279/379 (73%), Gaps = 4/379 (1%)
Query: 27 FLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAAR 86
+ T SLYVGDL +VT++ LY+ FS G +LS+R+CRDL T S Y YVN+ + DA
Sbjct: 8 YPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDAEH 67
Query: 87 ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
ALD +NF + K +RIM+S RDPS+RKSG GNIF+KNLDKSI++KAL+DT S+FGNILS
Sbjct: 68 ALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILS 127
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AI 204
C + D +G SKG+GFV FE E+A+ AI K+NGML+N ++VFVG F ++ERE A
Sbjct: 128 CNVVCDENG-SKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKEREAELGAR 186
Query: 205 KTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAK 264
+F NV++KN E DE LK +FG++G S VM D GKSK FGFV+FE +DA K
Sbjct: 187 AKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQK 246
Query: 265 AVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSID 324
AV+ +NGK+ + ++ YVG+AQKK ER+ ELK FEQ ++ + ++Q +NLY+KNL D ID
Sbjct: 247 AVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGID 306
Query: 325 DEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYV 384
DE+L++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +KPLYV
Sbjct: 307 DERLRKAFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Query: 385 AVAQRKEERRARLQAQFSQ 403
A+AQRKEER+A L ++ Q
Sbjct: 366 ALAQRKEERQAYLTNEYMQ 384
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 112/290 (38%), Positives = 165/290 (56%), Gaps = 21/290 (7%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
+++V +LD ++ + LYD S G +LS V D + S GYG+V++ A RA+
Sbjct: 100 NIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENG--SKGYGFVHFETHEAAERAIKK 157
Query: 91 LNFTPLNNKSIRI----MYSHRDPSI--RKSGTGNIFIKNLDKSIDHKALHDTFSSFGNI 144
+N LN + + + R+ + R N++IKN + +D + L D F FG
Sbjct: 158 MNGMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPA 217
Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAI 204
LS K+ TD SG+SKGFGFV FE E AQ A+D++NG +N KQ++VG +K ER+T
Sbjct: 218 LSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELK 277
Query: 205 KT------------KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFG 252
+T + N++VKNLD+ DE L+K F +GTITSA VM +G G+SK FG
Sbjct: 278 RTFEQMKQDRITRYQVVNLYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEG-GRSKGFG 336
Query: 253 FVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAM 302
FV F + ++A KAV +NG+ + YV AQ+K ER+ L ++ Q M
Sbjct: 337 FVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAYLTNEYMQRM 386
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 110/299 (36%), Positives = 173/299 (57%), Gaps = 18/299 (6%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATD--GSGQSKGFGFVQFE 166
+PS T ++++ +L + L++ FS G ILS +I D SG S + +V F+
Sbjct: 2 NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSS-NYAYVNFQ 60
Query: 167 NKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLK 226
+ + A++A+D +N +I K V + +R+ K+ N+FVKNLD+S ++ L
Sbjct: 61 HTKDAEHALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFVKNLDKSINNKALY 116
Query: 227 KIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQK 286
+G I S V+ D +G SK +GFV+FE + A +A++ +NG + R+ +VG+ +
Sbjct: 117 DTVSAFGNILSCNVVCDENG-SKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKS 175
Query: 287 KSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRD 346
+ ERE EL + ++ N+YIKN G+ +DDE+LK+LF +FG S KVM D
Sbjct: 176 RKEREAELGARAKEF----------PNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD 225
Query: 347 PSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
SG SKG GFV+F E+A +A+ EMNGK + K +YV AQ+K ER+ L+ F QM+
Sbjct: 226 ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMK 284
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 62/83 (74%)
Query: 497 TALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEAL 556
T ++ LA+A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+L++LESPE+L
Sbjct: 539 TLTASRLASAPPQKQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLYMLESPESL 598
Query: 557 KAKVAEAMEVLRSVAQQQANNPA 579
++KV EA+ VL++ ++A A
Sbjct: 599 RSKVDEAVAVLQAHQAKEATQKA 621
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
++ +LYV +LD + D +L FS G + S +V + RS G+G+V +++P +A
Sbjct: 289 TRYQVVNLYVKNLDDGIDDERLRKAFSPFGTITSAKVM--MEGGRSKGFGFVCFSSPEEA 346
Query: 85 ARALDVLNFTPLNNKSIRIMYSHR 108
+A+ +N + K + + + R
Sbjct: 347 TKAVTEMNGRIVATKPLYVALAQR 370
>gi|395548760|ref|XP_003775245.1| PREDICTED: polyadenylate-binding protein 1-like [Sarcophilus
harrisii]
Length = 730
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 206/375 (54%), Positives = 281/375 (74%), Gaps = 4/375 (1%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL VT++ LY+ FS G +LS+RVCRD T RSLGY YVN+ + ADA R +
Sbjct: 111 SLYVGDLHHEVTEAMLYEKFSPAGPILSIRVCRDAVTHRSLGYAYVNFQHLADAERVMTD 170
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+N + K +R+M+S RDPS+RKSG GN+F+KNL+KSI++K+L+D FSSFGNILSCK+
Sbjct: 171 MNLYIIKGKPVRLMWSQRDPSLRKSGIGNVFVKNLEKSINNKSLYDAFSSFGNILSCKVI 230
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET-VAIKTK-F 208
TD +G SKG+GFV FE++ESA+ AI K+NG+L+ND ++FVGHF +++RE+ + +T+ F
Sbjct: 231 TDDNG-SKGYGFVHFEHRESAERAIQKMNGILLNDLKIFVGHFKSRKDRESELGAQTREF 289
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NV++KN E ++ L KIF ++G S VMRD G+SK FGFVNF+ +DA A++
Sbjct: 290 TNVYIKNFGEDMDEDRLSKIFEKFGPTLSVKVMRDDCGRSKGFGFVNFQKHEDAQNAIDN 349
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
+NGK+ + R+ Y G+AQKK ER+ +L+ FEQ + + ++QG+NLYIKNL D IDDE L
Sbjct: 350 MNGKELNGRQIYAGRAQKKLERQTQLQRHFEQLKQNRIVRYQGVNLYIKNLDDDIDDENL 409
Query: 329 KELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
++ FS FGTITS KVM + +G SKG GFV FS PEEA+ A+ EMNG+++ SKPLYVA+AQ
Sbjct: 410 RKEFSSFGTITSAKVMMN-NGRSKGFGFVCFSAPEEATTAVTEMNGRLVASKPLYVALAQ 468
Query: 389 RKEERRARLQAQFSQ 403
RKEER+A L Q+ Q
Sbjct: 469 RKEERKAHLANQYVQ 483
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 173/569 (30%), Positives = 279/569 (49%), Gaps = 64/569 (11%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
+++V +L+ ++ + LYD FS G +LS +V D + S GYG+V++ + A RA+
Sbjct: 199 NVFVKNLEKSINNKSLYDAFSSFGNILSCKVITDDNG--SKGYGFVHFEHRESAERAIQK 256
Query: 91 LNFTPLNNKSIRIMYSH-RDPSIRKSGTG-------NIFIKNLDKSIDHKALHDTFSSFG 142
+N LN+ ++I H + R+S G N++IKN + +D L F FG
Sbjct: 257 MNGILLND--LKIFVGHFKSRKDRESELGAQTREFTNVYIKNFGEDMDEDRLSKIFEKFG 314
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET- 201
LS K+ D G+SKGFGFV F+ E AQNAID +NG +N +Q++ G +K ER+T
Sbjct: 315 PTLSVKVMRDDCGRSKGFGFVNFQKHEDAQNAIDNMNGKELNGRQIYAGRAQKKLERQTQ 374
Query: 202 -----------VAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKC 250
++ + N+++KNLD+ DE+L+K F +GTITSA VM + +G+SK
Sbjct: 375 LQRHFEQLKQNRIVRYQGVNLYIKNLDDDIDDENLRKEFSSFGTITSAKVMMN-NGRSKG 433
Query: 251 FGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQ 310
FGFV F ++A AV +NG+ + YV AQ+K ER+ L Q+ Q M
Sbjct: 434 FGFVCFSAPEEATTAVTEMNGRLVASKPLYVALAQRKEERKAHLANQYVQRMARI----- 488
Query: 311 GLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALA 370
+ LG + F+ S P+ ++ +S S +
Sbjct: 489 -RSTATPTLGPYRTGASSRYFFTPLTQSQSRGAYYSPNHFAQLRSSPHWSAQRVRSHSFQ 547
Query: 371 EMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQ 430
+ G I K + +R+ + + R + ++ P+ PPG + +
Sbjct: 548 TITGP-IHPKFCRSPLMSTSHMSTSRISRRITTQRVTSPAHTL---RPLCPPGTTFI--- 600
Query: 431 FLYGQAPPAIIPPQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLP-VPVDMGAGIPRRDAS 489
P + Q Y+Y G N + F +G +P + + A +P
Sbjct: 601 -------PTLRSTQQ------YKY-TGANYNHYQF-IGIPPRIPTLTRQLVAHLP----- 640
Query: 490 VGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHL 549
GQ I + STAL P+ Q+ +LGE L+PL++ L A K+TGMLL+ +E+L +
Sbjct: 641 -GQEPAIPSTSTAL----PQPQKRVLGERLFPLIQDLHPTLAGKITGMLLDRQNSEILRM 695
Query: 550 LESPEALKAKVAEAMEVLRSVAQQQANNP 578
L SPE L++K++EAM VL++ +++A P
Sbjct: 696 LNSPECLRSKISEAMAVLQAHNEKEAILP 724
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 111/216 (51%), Gaps = 33/216 (15%)
Query: 21 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYAN 80
GA +F T++Y+ + ++ + +L +F + G LSV+V RD RS G+G+VN+
Sbjct: 283 GAQTREF--TNVYIKNFGEDMDEDRLSKIFEKFGPTLSVKVMRD-DCGRSKGFGFVNFQK 339
Query: 81 PADAARALDVLNFTPLNNKSIRIMYSHR--------------------DPSIRKSGTGNI 120
DA A+D +N LN + I Y+ R + +R G N+
Sbjct: 340 HEDAQNAIDNMNGKELNGRQI---YAGRAQKKLERQTQLQRHFEQLKQNRIVRYQGV-NL 395
Query: 121 FIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNG 180
+IKNLD ID + L FSSFG I S K+ + +G+SKGFGFV F E A A+ ++NG
Sbjct: 396 YIKNLDDDIDDENLRKEFSSFGTITSAKVMMN-NGRSKGFGFVCFSAPEEATTAVTEMNG 454
Query: 181 MLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNL 216
L+ K ++V RK+ER K N +V+ +
Sbjct: 455 RLVASKPLYVALAQRKEER-----KAHLANQYVQRM 485
>gi|268581545|ref|XP_002645756.1| C. briggsae CBR-PAB-2 protein [Caenorhabditis briggsae]
Length = 685
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 224/431 (51%), Positives = 295/431 (68%), Gaps = 9/431 (2%)
Query: 27 FLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAAR 86
+ SLY+GDL +VT+S L++ FS G VLS+RVCRD ++R SLGY YVN+ PADA R
Sbjct: 49 YSMASLYIGDLHGDVTESMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAER 108
Query: 87 ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
ALD +NF ++ + +RIM+S RDP+ R++G GNIFIKNLD+ ID+K+++DTFS FGNILS
Sbjct: 109 ALDTMNFETIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSIYDTFSLFGNILS 168
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER--ETVAI 204
CK+A D G S+G+GFV FE +ESAQ AI+K+NGML++ K+V+VG F + +R E
Sbjct: 169 CKVAADEDGSSRGYGFVHFETEESAQIAIEKVNGMLLSGKKVYVGKFQTRAQRLKELGES 228
Query: 205 KTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAK 264
K+ NVFVKN E E L K+F +YG ITSAVVM D DGK K FGFV + + D A K
Sbjct: 229 GLKYTNVFVKNFGEHLDQEKLTKMFSKYGEITSAVVMTDADGKPKGFGFVAYADPDAAQK 288
Query: 265 AVEALNGKKFD--DREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDS 322
AV+ LN K + D + V +AQKKSER +LK ++E +E V ++QG+NLY+KN+ +
Sbjct: 289 AVDDLNEKTLEGTDLKLSVCRAQKKSERTADLKRKYEALKQERVQRYQGVNLYVKNIDEE 348
Query: 323 IDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPL 382
+ DE L+ F+ FGTITS KVM D +G SKG GFV F PEEA+ A+ EMN KM+ SKPL
Sbjct: 349 LTDEGLRAHFASFGTITSAKVMVDENGRSKGFGFVCFEKPEEATAAVTEMNSKMMGSKPL 408
Query: 383 YVAVAQRKEERRARLQAQFSQ-MRPVAMGP---SVPPRMPMYPPGPSG-LGQQFLYGQAP 437
YVA+AQRKE+RRA+L +Q+ Q + + MG VP P+YP G G + Q
Sbjct: 409 YVALAQRKEDRRAQLASQYMQKLATLRMGQQTNGVPGMAPIYPQGQQGFFVPNPMAAQGR 468
Query: 438 PAIIPPQMPPR 448
P PP P R
Sbjct: 469 PVFQPPAAPMR 479
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 104/197 (52%), Gaps = 21/197 (10%)
Query: 21 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYAN 80
G SG ++ T+++V + ++ +L +FS+ G++ S V D + + G+G+V YA+
Sbjct: 226 GESGLKY--TNVFVKNFGEHLDQEKLTKMFSKYGEITSAVVMTD-ADGKPKGFGFVAYAD 282
Query: 81 PADAARALDVLNFTPLNNKSIRIMY------SHRDPSIRKSGTG------------NIFI 122
P A +A+D LN L +++ S R +++ N+++
Sbjct: 283 PDAAQKAVDDLNEKTLEGTDLKLSVCRAQKKSERTADLKRKYEALKQERVQRYQGVNLYV 342
Query: 123 KNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGML 182
KN+D+ + + L F+SFG I S K+ D +G+SKGFGFV FE E A A+ ++N +
Sbjct: 343 KNIDEELTDEGLRAHFASFGTITSAKVMVDENGRSKGFGFVCFEKPEEATAAVTEMNSKM 402
Query: 183 INDKQVFVGHFLRKQER 199
+ K ++V RK++R
Sbjct: 403 MGSKPLYVALAQRKEDR 419
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
Query: 497 TALSTALANASPEQQRTLLGESLYPLVEQL--ERDAAAKVTGMLLEMDQTEVLHLLESPE 554
T S LA A+P++Q+ LLGE +Y L+E+L A K+TGM+LE+D E++ +L+ +
Sbjct: 602 TLTSHMLAQAAPQEQKQLLGERIYALIEKLFPSHKDAGKITGMMLEIDNAELIMMLQDGD 661
Query: 555 ALKAKVAEAMEVL 567
++KV EA VL
Sbjct: 662 LFRSKVEEANSVL 674
>gi|189190886|ref|XP_001931782.1| polyadenylate-binding protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187973388|gb|EDU40887.1| polyadenylate-binding protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 704
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 219/444 (49%), Positives = 295/444 (66%), Gaps = 56/444 (12%)
Query: 9 QAQMSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTR 68
Q ++S P A + N + SLYVG+LD +VT++ L++LFS +GQV S+RVCRD TR
Sbjct: 30 QGEVSTPTSAAPAHNQN---SASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTR 86
Query: 69 RSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKS 128
RSLGY YVNY + D +AL+ LN+T + K RIM+S RDP++RK+G GN+FIKNLD +
Sbjct: 87 RSLGYAYVNYNSSEDGEKALEELNYTVIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDHA 146
Query: 129 IDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQV 188
ID+KALHDTF++FGNILSCK+A D G SKG+GFV +E E+A NAI +NGML+N+K+V
Sbjct: 147 IDNKALHDTFAAFGNILSCKVAQDELGNSKGYGFVHYETAEAANNAIKHVNGMLLNEKKV 206
Query: 189 FVGHFLRKQERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDG 246
FVGH + K+ER + +K F N++VKN+D +DED + +F ++G ITSA + RD G
Sbjct: 207 FVGHHIPKKERMSKFEEMKANFTNIYVKNIDLDVSDEDFRDLFEKHGDITSASIARDDQG 266
Query: 247 KSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETV 306
KS+ FGFVN+ + A+ AV+ALN F ++ YVG+AQKK ERE+EL+ Q+E A E
Sbjct: 267 KSRGFGFVNYIKHEAASAAVDALNDTDFRGQKLYVGRAQKKHEREEELRKQYEAARLEKQ 326
Query: 307 DKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRD--PS---------------- 348
K+QG+NLYIKNL D +DDEKL+++F+ FGTITS KVMRD P+
Sbjct: 327 SKYQGVNLYIKNLNDDVDDEKLRDMFTPFGTITSAKVMRDAMPAAGSEDATDEKKDESKE 386
Query: 349 ---------------------------------GISKGSGFVAFSTPEEASRALAEMNGK 375
G SKG GFV FS P+EA++A+ EMN K
Sbjct: 387 ESEEAKDESKEDSDDKKDEKADKVTIKGEKKILGKSKGFGFVCFSNPDEATKAVTEMNQK 446
Query: 376 MIVSKPLYVAVAQRKEERRARLQA 399
MI +KPLYVA+AQRK+ R+ +L+A
Sbjct: 447 MIENKPLYVALAQRKDVRKNQLEA 470
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 152/293 (51%), Gaps = 21/293 (7%)
Query: 117 TGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAI 175
+ ++++ LD S+ L + FSS G + S ++ D + +S G+ +V + + E + A+
Sbjct: 47 SASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSSEDGEKAL 106
Query: 176 DKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTI 235
++LN +I K + +R+ KT NVF+KNLD + ++ L F +G I
Sbjct: 107 EELNYTVIKGKPCRI----MWSQRDPALRKTGQGNVFIKNLDHAIDNKALHDTFAAFGNI 162
Query: 236 TSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSERE---Q 292
S V +D G SK +GFV++E A+ A A++ +NG ++++ +VG K ER +
Sbjct: 163 LSCKVAQDELGNSKGYGFVHYETAEAANNAIKHVNGMLLNEKKVFVGHHIPKKERMSKFE 222
Query: 293 ELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISK 352
E+K F N+Y+KN+ + DE ++LF + G ITS + RD G S+
Sbjct: 223 EMKANF-------------TNIYVKNIDLDVSDEDFRDLFEKHGDITSASIARDDQGKSR 269
Query: 353 GSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
G GFV + E AS A+ +N + LYV AQ+K ER L+ Q+ R
Sbjct: 270 GFGFVNYIKHEAASAAVDALNDTDFRGQKLYVGRAQKKHEREEELRKQYEAAR 322
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 39/49 (79%)
Query: 501 TALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHL 549
+AL A+P QQ+ +LGE+LYP + +++ + A K+TGMLLEMD +E+++L
Sbjct: 656 SALQGAAPGQQKQMLGEALYPKIAEMQPELAGKITGMLLEMDNSELINL 704
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 34/54 (62%)
Query: 246 GKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFE 299
GKSK FGFV F N D+A KAV +N K +++ YV AQ+K R+ +L+ +
Sbjct: 420 GKSKGFGFVCFSNPDEATKAVTEMNQKMIENKPLYVALAQRKDVRKNQLEATIQ 473
>gi|310798668|gb|EFQ33561.1| 4 family polyadenylate binding protein [Glomerella graminicola
M1.001]
Length = 768
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 218/473 (46%), Positives = 304/473 (64%), Gaps = 57/473 (12%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVG+LD +VT++ L++LFSQ+G V S+RVCRD TRRSLGY YVNY +D +AL
Sbjct: 63 SASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTSDGEKAL 122
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LN+T + + RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++FGNILSCK
Sbjct: 123 EELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCK 182
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKT 206
+A D G SKG+GFV +E E+A AI +NGML+N+K+V+VGH + K++R++ +K
Sbjct: 183 VAQDEHGNSKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKDRQSKFEEMKA 242
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
F N++VKN+ TD++ + +F +G +TS+ + RD +GKS+ FGFVNF + AAKAV
Sbjct: 243 NFTNIYVKNIANEVTDDEFRDLFTAFGDVTSSSLARDQEGKSRGFGFVNFTTHEAAAKAV 302
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
+ LNGK F ++ YVG+AQKK ERE+EL+ +E A E K+QG+NLYIKNL D +DDE
Sbjct: 303 DDLNGKDFRGQDLYVGRAQKKHEREEELRKSYEAARMEKASKYQGVNLYIKNLDDEVDDE 362
Query: 327 KLKELFSEFGTITSCKVMRD---------------------------------------- 346
KL++LF++FG ITS KVMRD
Sbjct: 363 KLRQLFADFGPITSAKVMRDNATESGNEDEGSSDDKENEPKKEEGEEKAEEAKSEDKEDA 422
Query: 347 -----------PSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRA 395
P G SKG GFV FS P++A++A+AEMN +M+ KPLYVA+AQRK+ R++
Sbjct: 423 DKKADKKSDKKPHGKSKGFGFVCFSNPDDATKAVAEMNQRMVNGKPLYVALAQRKDVRKS 482
Query: 396 RLQAQFSQMRPVAMGPSVP----PRMPMYPPGPSGLGQQFLYGQAPPAIIPPQ 444
+L+A + M + P+ M PP GQQ ++ Q + PQ
Sbjct: 483 QLEASIQARNQLRMQQAAAAAGMPQQYMQPPVFYAAGQQPVFPQGGRGMAFPQ 535
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 58/95 (61%), Gaps = 3/95 (3%)
Query: 480 GAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLL 539
G G P +D + G + A A ++P QQ+ +LGE ++P ++ ++ + A K+TGMLL
Sbjct: 663 GRGAPAQDLNSGS---LIQQQLAAAGSNPGQQKQILGEVIFPKIQAIQPELAGKITGMLL 719
Query: 540 EMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQ 574
EMD E+++L+E ALKAKV EA+ V + Q
Sbjct: 720 EMDNAELVNLIEDESALKAKVDEALGVYEEYIKAQ 754
>gi|167519406|ref|XP_001744043.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778005|gb|EDQ91621.1| predicted protein [Monosiga brevicollis MX1]
Length = 563
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 248/574 (43%), Positives = 351/574 (61%), Gaps = 60/574 (10%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
SLYVGDL VT++ LY+ FSQ+G V+S+RVCRD +R+SLGY YVNY ADA AL
Sbjct: 7 NASLYVGDLHPEVTEATLYEFFSQMGSVISIRVCRDAVSRQSLGYAYVNYQQHADAKHAL 66
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LNF +++K RIM++ R+P+ R+SG GNIFIKNL+K ID+KAL+DTFS+FG ILSCK
Sbjct: 67 EELNFEKIHDKPCRIMWAQRNPAARRSGAGNIFIKNLNKEIDNKALYDTFSAFGTILSCK 126
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKF 208
+A D G+S+G+GFV FE +E AQ AID +NG ++ + V V FL ++ERE +T +
Sbjct: 127 VAADEKGESRGYGFVHFEKEEDAQKAIDTVNGKMLLKQVVTVTKFLSRKEREQQGGRT-Y 185
Query: 209 NNVFVKNL-DESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVE 267
N++VKNL D T++DLKK+F ++GTITS + +D + KS+ FGFVNFEN++ A AVE
Sbjct: 186 TNIYVKNLPDSYATNDDLKKLFEKFGTITSTFLAKDENDKSRGFGFVNFENSEAANAAVE 245
Query: 268 ALNGKKFD-DREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
A+N K+ + DR+ +VG+A KK ERE+ELK ++ +E +K + NLYIK+L + + ++
Sbjct: 246 AMNEKEIETDRKLFVGRAMKKHERERELKRIHDKIRQERDEKNKNSNLYIKHLPEDVTED 305
Query: 327 KLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 386
L++ FS+FGTITS K+M D +G S+G GFV F + +EA+ A+ EM+G MI KPLYVA+
Sbjct: 306 ALRDKFSKFGTITSLKIMTDNNGDSRGFGFVNFDSADEAAAAIQEMHGSMIDGKPLYVAL 365
Query: 387 AQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPPQMP 446
A RK +R Q Q + R ++P +MPM G P + PPQ
Sbjct: 366 ALRKVDR----QKQLASRR------TMPGQMPM--------------GYLPFMMPPPQAN 401
Query: 447 PRGHAYRYPLGRNMQDFPFDMGAGSMLPVP------VDMGAGIPRRD----------ASV 490
R+P MQ P G G P + S
Sbjct: 402 MMRMGNRFPPMFMMQQQQQQQQQQQQQHAPGMNGNMRGRGRGNPNKGNGRGRGQGPMPSQ 461
Query: 491 GQPMPITALSTA-----------------LANASPEQQRTLLGESLYPLVEQLERDAAAK 533
GQPMP+ + +A LA+ + +Q+ LLGE L+PL++Q + A K
Sbjct: 462 GQPMPMQSAPSAARVAAPAPNNNQDEFANLAHMTDAEQKNLLGEKLFPLIQQEYHERAGK 521
Query: 534 VTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVL 567
+TGMLL M+ EVL+LL+ + LK + EA ++L
Sbjct: 522 ITGMLLGMETAEVLNLLQDQDQLKQRAREAYDLL 555
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 310 QGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP-SGISKGSGFVAFSTPEEASRA 368
Q +LY+ +L + + L E FS+ G++ S +V RD S S G +V + +A A
Sbjct: 6 QNASLYVGDLHPEVTEATLYEFFSQMGSVISIRVCRDAVSRQSLGYAYVNYQQHADAKHA 65
Query: 369 LAEMNGKMIVSKPLYVAVAQR 389
L E+N + I KP + AQR
Sbjct: 66 LEELNFEKIHDKPCRIMWAQR 86
>gi|57997079|emb|CAB66834.2| hypothetical protein [Homo sapiens]
Length = 631
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 208/379 (54%), Positives = 279/379 (73%), Gaps = 4/379 (1%)
Query: 27 FLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAAR 86
+ T SLYVGDL +VT++ LY+ FS G +LS+R+CRDL T S Y YVN+ + DA
Sbjct: 8 YPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDAEH 67
Query: 87 ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
ALD +NF + K +RIM+S RDPS+RKSG GNIF+KNLDKSI++KAL+DT S+FGNILS
Sbjct: 68 ALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILS 127
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AI 204
C + D +G SKG+GFV FE E+A+ AI K+NGML+N ++VFVG F ++ERE A
Sbjct: 128 CNVVCDENG-SKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKEREAELGAR 186
Query: 205 KTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAK 264
+F NV++KN E DE LK +FG++G S +M D GKSK FGFV+FE +DA K
Sbjct: 187 AKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVELMTDESGKSKGFGFVSFERHEDAQK 246
Query: 265 AVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSID 324
AV+ +NGK+ + ++ YVG+AQKK ER+ ELK FEQ ++ + ++Q +NLY+KNL D ID
Sbjct: 247 AVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGID 306
Query: 325 DEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYV 384
DE+L++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +KPLYV
Sbjct: 307 DERLRKAFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Query: 385 AVAQRKEERRARLQAQFSQ 403
A+AQRKEER+A L ++ Q
Sbjct: 366 ALAQRKEERQAYLTNEYMQ 384
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 111/290 (38%), Positives = 165/290 (56%), Gaps = 21/290 (7%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
+++V +LD ++ + LYD S G +LS V D + S GYG+V++ A RA+
Sbjct: 100 NIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENG--SKGYGFVHFETHEAAERAIKK 157
Query: 91 LNFTPLNNKSIRI----MYSHRDPSI--RKSGTGNIFIKNLDKSIDHKALHDTFSSFGNI 144
+N LN + + + R+ + R N++IKN + +D + L D F FG
Sbjct: 158 MNGMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPA 217
Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAI 204
LS ++ TD SG+SKGFGFV FE E AQ A+D++NG +N KQ++VG +K ER+T
Sbjct: 218 LSVELMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELK 277
Query: 205 KT------------KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFG 252
+T + N++VKNLD+ DE L+K F +GTITSA VM +G G+SK FG
Sbjct: 278 RTFEQMKQDRITRYQVVNLYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEG-GRSKGFG 336
Query: 253 FVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAM 302
FV F + ++A KAV +NG+ + YV AQ+K ER+ L ++ Q M
Sbjct: 337 FVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAYLTNEYMQRM 386
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 108/299 (36%), Positives = 173/299 (57%), Gaps = 18/299 (6%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATD--GSGQSKGFGFVQFE 166
+PS T ++++ +L + L++ FS G ILS +I D SG S + +V F+
Sbjct: 2 NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSG-SSNYAYVNFQ 60
Query: 167 NKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLK 226
+ + A++A+D +N +I K V + +R+ K+ N+FVKNLD+S ++ L
Sbjct: 61 HTKDAEHALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFVKNLDKSINNKALY 116
Query: 227 KIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQK 286
+G I S V+ D +G SK +GFV+FE + A +A++ +NG + R+ +VG+ +
Sbjct: 117 DTVSAFGNILSCNVVCDENG-SKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKS 175
Query: 287 KSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRD 346
+ ERE EL + ++ N+YIKN G+ +DDE+LK+LF +FG S ++M D
Sbjct: 176 RKEREAELGARAKEFP----------NVYIKNFGEDMDDERLKDLFGKFGPALSVELMTD 225
Query: 347 PSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
SG SKG GFV+F E+A +A+ EMNGK + K +YV AQ+K ER+ L+ F QM+
Sbjct: 226 ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMK 284
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 62/83 (74%)
Query: 497 TALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEAL 556
T ++ LA+A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+L++LESPE+L
Sbjct: 539 TLTASRLASAPPQKQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLYMLESPESL 598
Query: 557 KAKVAEAMEVLRSVAQQQANNPA 579
++KV EA+ VL++ ++A A
Sbjct: 599 RSKVDEAVAVLQAHQAKEATQKA 621
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
++ +LYV +LD + D +L FS G + S +V + RS G+G+V +++P +A
Sbjct: 289 TRYQVVNLYVKNLDDGIDDERLRKAFSPFGTITSAKVM--MEGGRSKGFGFVCFSSPEEA 346
Query: 85 ARALDVLNFTPLNNKSIRIMYSHR 108
+A+ +N + K + + + R
Sbjct: 347 TKAVTEMNGRIVATKPLYVALAQR 370
>gi|237833723|ref|XP_002366159.1| polyadenylate-binding protein, putative [Toxoplasma gondii ME49]
gi|211963823|gb|EEA99018.1| polyadenylate-binding protein, putative [Toxoplasma gondii ME49]
Length = 768
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 219/423 (51%), Positives = 296/423 (69%), Gaps = 34/423 (8%)
Query: 15 PNG-VAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGY 73
PNG + AGA+ F++ SLYVGDL +VT++ L+++F+ VG V S+RVCRD TRRSLGY
Sbjct: 69 PNGGMNAGAA--NFVSPSLYVGDLHQDVTEAMLFEVFNSVGPVTSIRVCRDTVTRRSLGY 126
Query: 74 GYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKA 133
YVNY DA R+LD LN+T + + RIM+ HRDPS+RKSG GNIF+KNLDK+ID+KA
Sbjct: 127 AYVNYQGIQDAERSLDTLNYTVIKGQPCRIMWCHRDPSLRKSGNGNIFVKNLDKNIDNKA 186
Query: 134 LHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHF 193
L+DTFS FGNILSCK+A D +G SKG+GFV +EN+ESA++AIDK+NGMLI K V+VG F
Sbjct: 187 LYDTFSLFGNILSCKVAVDDNGHSKGYGFVHYENEESARSAIDKVNGMLIGGKTVYVGPF 246
Query: 194 LRKQERETVAIKTKFNNVFVKNLDESTTDED-LKKIFGEYGTITSAVVMRDGDGKSKCFG 252
+R+ ER+ +A + K+ NV++KN+ + DE L++ F ++G+ITS VV +D G + F
Sbjct: 247 IRRAERDNLA-EAKYTNVYIKNMPSAWEDESRLRETFSKFGSITSLVVRKDPKG--RLFA 303
Query: 253 FVNFENADDAAKAVEALNGKKFDD---------------------RE----WYVGKAQKK 287
F NF + D A AVEALNGK+ D RE +VG Q K
Sbjct: 304 FCNFADHDSAKAAVEALNGKRVTDAGAIKEGEDSGAEEKEEEGQKREGDQILFVGPHQSK 363
Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
+ R L+ +FEQ ++ D+FQG+NLYIKN+ DSIDDEKL++LF FG+ITS KVMRD
Sbjct: 364 AHRSAMLRAKFEQMNQDRNDRFQGVNLYIKNMDDSIDDEKLRQLFEPFGSITSAKVMRDE 423
Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFS--QMR 405
G+S+ GFV F +PEEA++A+ EM+ K++ KPLYV +A+R+E+R RLQ +F +R
Sbjct: 424 RGVSRCFGFVCFMSPEEATKAVTEMHLKLVKGKPLYVGLAERREQRLMRLQQRFRLPSLR 483
Query: 406 PVA 408
P A
Sbjct: 484 PAA 486
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%)
Query: 508 PEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVL 567
P Q+ +LGE L+PL+ + + + A K+TGM+LEMD E+L LLES LKAKV EA+ VL
Sbjct: 705 PSMQKQMLGEKLFPLIARYQPELAGKITGMMLEMDNAELLILLESEAQLKAKVDEALRVL 764
Query: 568 RSVA 571
+ +
Sbjct: 765 QQAS 768
>gi|385281386|gb|AFI57844.1| polyA binding protein, partial [Cocos nucifera]
Length = 352
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 205/268 (76%), Positives = 238/268 (88%)
Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
+E+A NAI+KLNGML+NDK+VFVG FLRKQ+RE A TKFNNVFVKNL ESTT+++L +
Sbjct: 6 EEAAHNAIEKLNGMLLNDKKVFVGPFLRKQDRENTANSTKFNNVFVKNLSESTTEDNLLE 65
Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
IFGEYG ITSAVVMR+GDGKSKCFGFVNFE+ + AAKAV+ LNGKKFD +EWYVGKAQKK
Sbjct: 66 IFGEYGNITSAVVMREGDGKSKCFGFVNFEDPEHAAKAVKELNGKKFDGKEWYVGKAQKK 125
Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
SERE ELKG+FEQ M+E DK QG NLY+KNL DSI D+KL+ELFSEFG+ITSCKVMRDP
Sbjct: 126 SEREMELKGRFEQRMQEAADKNQGANLYLKNLDDSIGDDKLRELFSEFGSITSCKVMRDP 185
Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPV 407
+G+S+GSGFVAF +P++AS+ALAEMNGKMI SKPLYVA+AQRKE+RRARLQAQFSQMRPV
Sbjct: 186 NGVSRGSGFVAFQSPDDASKALAEMNGKMIGSKPLYVALAQRKEDRRARLQAQFSQMRPV 245
Query: 408 AMGPSVPPRMPMYPPGPSGLGQQFLYGQ 435
A+ PSV PR+PMYP G G+GQQ YGQ
Sbjct: 246 AIPPSVAPRVPMYPAGAPGMGQQLFYGQ 273
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 90/240 (37%), Positives = 137/240 (57%), Gaps = 17/240 (7%)
Query: 78 YANPADAAR-ALDVLNFTPLNNKSIRI----MYSHRDPSIRKSGTGNIFIKNLDKSIDHK 132
Y +P +AA A++ LN LN+K + + R+ + + N+F+KNL +S
Sbjct: 2 YVDPEEAAHNAIEKLNGMLLNDKKVFVGPFLRKQDRENTANSTKFNNVFVKNLSESTTED 61
Query: 133 ALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGH 192
L + F +GNI S + +G G+SK FGFV FE+ E A A+ +LNG + K+ +VG
Sbjct: 62 NLLEIFGEYGNITSAVVMREGDGKSKCFGFVNFEDPEHAAKAVKELNGKKFDGKEWYVGK 121
Query: 193 FLRKQERET------------VAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVV 240
+K ERE A K + N+++KNLD+S D+ L+++F E+G+ITS V
Sbjct: 122 AQKKSEREMELKGRFEQRMQEAADKNQGANLYLKNLDDSIGDDKLRELFSEFGSITSCKV 181
Query: 241 MRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQ 300
MRD +G S+ GFV F++ DDA+KA+ +NGK + YV AQ+K +R L+ QF Q
Sbjct: 182 MRDPNGVSRGSGFVAFQSPDDASKALAEMNGKMIGSKPLYVALAQRKEDRRARLQAQFSQ 241
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 100/186 (53%), Gaps = 17/186 (9%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
+++V +L + T+ L ++F + G + S V R+ +S +G+VN+ +P AA+A+
Sbjct: 47 NNVFVKNLSESTTEDNLLEIFGEYGNITSAVVMRE-GDGKSKCFGFVNFEDPEHAAKAVK 105
Query: 90 VLNFTPLNNKSIRI----MYSHRDPSIR------------KSGTGNIFIKNLDKSIDHKA 133
LN + K + S R+ ++ K+ N+++KNLD SI
Sbjct: 106 ELNGKKFDGKEWYVGKAQKKSEREMELKGRFEQRMQEAADKNQGANLYLKNLDDSIGDDK 165
Query: 134 LHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHF 193
L + FS FG+I SCK+ D +G S+G GFV F++ + A A+ ++NG +I K ++V
Sbjct: 166 LRELFSEFGSITSCKVMRDPNGVSRGSGFVAFQSPDDASKALAEMNGKMIGSKPLYVALA 225
Query: 194 LRKQER 199
RK++R
Sbjct: 226 QRKEDR 231
>gi|340517112|gb|EGR47358.1| polyadenylate-binding protein [Trichoderma reesei QM6a]
Length = 745
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 224/478 (46%), Positives = 309/478 (64%), Gaps = 58/478 (12%)
Query: 13 SGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLG 72
S P AA N + SLYVG+LD +VT++ L++LFSQ+G V S+RVCRD TRRSLG
Sbjct: 45 SAPTPTAAPHPQN---SASLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLG 101
Query: 73 YGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHK 132
Y YVNY + D +AL+ LN+T + + RIM+S RDP++RK+G GN+FIKNLD +ID+K
Sbjct: 102 YAYVNYNSTPDGEKALEELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNK 161
Query: 133 ALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGH 192
ALHDTF++FGNILSCK+A D +G SKG+GFV +E E+A AI +NGML+N+K+V+VG+
Sbjct: 162 ALHDTFAAFGNILSCKVAQDENGNSKGYGFVHYETDEAAAQAIKHVNGMLLNEKKVYVGY 221
Query: 193 FLRKQERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKC 250
+ K++R++ +K F NV+VKN+ TDED +++F ++G +TS+ + RD +GK++
Sbjct: 222 HIPKKDRQSKFEEMKANFTNVYVKNIAPDVTDEDFRQLFEKFGDVTSSSLARDQEGKTRG 281
Query: 251 FGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQ 310
FGFVNF + A KAVE LNGK F ++ YVG+AQKK ERE+EL+ +E A E +K+Q
Sbjct: 282 FGFVNFTTHEAAFKAVEELNGKDFRGQDLYVGRAQKKHEREEELRKSYEAARLEKANKYQ 341
Query: 311 GLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPS---------------------- 348
G+NLYIKNL D +DDEKL+++F+EFG ITS KVMRD
Sbjct: 342 GVNLYIKNLDDDVDDEKLRQMFAEFGPITSAKVMRDVPQEGEEEAKDQEKDKENQKEGEK 401
Query: 349 --------------------GISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
G SKG GFV FS P++A++A+AEMN +MI +KPLYVA+AQ
Sbjct: 402 EGESAEGAEKKTEKKSDKKLGKSKGFGFVCFSNPDDATKAVAEMNQRMINNKPLYVALAQ 461
Query: 389 RKEERRARLQAQFSQMRPVAMGPSVP----PRMPMYPPGPSGLGQQFLYGQAPPAIIP 442
RK+ R+++L+A + M + P+ M PP GQQ P IP
Sbjct: 462 RKDVRKSQLEASIQARNQLRMQQAAAAAGMPQQYMQPPVFYAPGQQ-------PGFIP 512
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 43/62 (69%)
Query: 514 LLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQ 573
+LGE ++P ++ + + A K+TGMLLEMD +E+++L+E ALKAKV EA+ V +
Sbjct: 672 ILGELIFPKIQAINSELAGKITGMLLEMDNSELVNLIEDEAALKAKVDEALAVYDEYVKS 731
Query: 574 QA 575
QA
Sbjct: 732 QA 733
>gi|322698722|gb|EFY90490.1| poly(A) RNA binding protein [Metarhizium acridum CQMa 102]
Length = 742
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 219/464 (47%), Positives = 304/464 (65%), Gaps = 59/464 (12%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVG+LD +VT++ L++LFSQ+G V S+RVCRD TRRSLGY YVNY + AD +AL
Sbjct: 59 SASLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNSTADGEKAL 118
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LN+T + + RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++FGNILSCK
Sbjct: 119 EELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCK 178
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKT 206
+A D +G SKG+GFV +E E+A AI +NGML+N+K+V+VGH + K++R++ +K
Sbjct: 179 VAQDENGNSKGYGFVHYETDEAAHQAIKHVNGMLLNEKKVYVGHHIPKKDRQSKFEEMKA 238
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
F N++VKN+ +D++ +++F +YG ITS+ + RD +GKS+ FGFVNF + AAKAV
Sbjct: 239 NFTNIYVKNISTEASDDEFRELFEKYGDITSSSLARDQEGKSRGFGFVNFTTHESAAKAV 298
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
E L+GK F ++ YVG+AQKK ERE+EL+ +E A E +K+QG+NLYIKNL D +DDE
Sbjct: 299 EELHGKDFRGQDLYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLDDDVDDE 358
Query: 327 KLKELFSEFGTITSCKVMRD-PSGISKGS------------------------------- 354
KL+++F+EFG ITS KVMRD PS S
Sbjct: 359 KLRQMFAEFGPITSAKVMRDAPSDGSDDDKEKEEDNEKEPEAKEEAKETEEEDADKKADK 418
Query: 355 ------------GFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFS 402
GFV FS P++A++A+AEMN +MI KPLYVA+AQRK+ R+++L+A
Sbjct: 419 KGDKKLGKSKGFGFVCFSNPDDATKAVAEMNQRMINGKPLYVALAQRKDVRKSQLEASIQ 478
Query: 403 QMRPVAMGPSVP----PRMPMYPPGPSGLGQQFLYGQAPPAIIP 442
+ M + P+ M PP YGQ P IP
Sbjct: 479 ARNQLRMQQAAAAAGMPQQYMQPP--------VFYGQQ-PGFIP 513
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 57/93 (61%)
Query: 488 ASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVL 547
A G+ + L LA A P QQ+ +LGE ++P ++ + + A K+TGMLLEM+ +E++
Sbjct: 638 AGRGEGNNASVLQAQLAGAQPAQQKQILGEIIFPKIQAINSELAGKITGMLLEMENSELV 697
Query: 548 HLLESPEALKAKVAEAMEVLRSVAQQQANNPAD 580
+L+E ALKAKV EA+ V + Q N A+
Sbjct: 698 NLIEDDVALKAKVDEALAVYDEYVKSQGNEGAE 730
>gi|395545876|ref|XP_003774823.1| PREDICTED: polyadenylate-binding protein 1-like [Sarcophilus
harrisii]
Length = 621
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 205/373 (54%), Positives = 275/373 (73%), Gaps = 4/373 (1%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL +VT++ LY+ FS G +LS+RVCRD+ TR SLGY YVN+ +DA R L+
Sbjct: 3 SLYVGDLHHDVTEAMLYEKFSPAGPILSIRVCRDMITRSSLGYAYVNFQQSSDAQRVLET 62
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+N + K +RIM+S RDPS+RKSG GNIF+KNL+KSID++AL D FS FGNILSCK+
Sbjct: 63 MNLDVIKGKPVRIMWSQRDPSLRKSGVGNIFVKNLEKSIDNRALFDAFSGFGNILSCKVV 122
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTKF 208
+D +G SKG+GFV FE +ESA+ AI+K+NG+++ +VFVGHF ++ERE A +F
Sbjct: 123 SDENG-SKGYGFVHFETQESAEKAIEKMNGIVLKSLKVFVGHFKSRKERELELGARAREF 181
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NV++KN E + L +IFG +G S VM D G+SK FGFV++ +DA +AV+
Sbjct: 182 TNVYIKNFGEDMDNARLGEIFGRFGRALSVKVMTDERGRSKGFGFVSYATHEDAQRAVDE 241
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
+NGK+ + R YVG+AQKK ER+ ELK FEQ ++ V ++QG+NLY+KNL D+IDDE+L
Sbjct: 242 MNGKELNGRRIYVGRAQKKGERQTELKRHFEQIKQDRVTRYQGVNLYVKNLDDTIDDERL 301
Query: 329 KELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
+ FS FGTITS KVM + G S+G GFV FS P+EA++A+ EMNGK++ SKPLYVA+AQ
Sbjct: 302 RTEFSPFGTITSAKVMME-GGHSRGFGFVCFSAPDEAAKAVTEMNGKLVTSKPLYVALAQ 360
Query: 389 RKEERRARLQAQF 401
RKEER+A L Q+
Sbjct: 361 RKEERQAHLTNQY 373
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 179/566 (31%), Positives = 287/566 (50%), Gaps = 68/566 (12%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
+++V +L+ ++ + L+D FS G +LS +V D + S GYG+V++ A +A++
Sbjct: 91 NIFVKNLEKSIDNRALFDAFSGFGNILSCKVVSDENG--SKGYGFVHFETQESAEKAIEK 148
Query: 91 LNFTPLNNKSIRIMYSH------RDPSI--RKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
+N L KS+++ H R+ + R N++IKN + +D+ L + F FG
Sbjct: 149 MNGIVL--KSLKVFVGHFKSRKERELELGARAREFTNVYIKNFGEDMDNARLGEIFGRFG 206
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 202
LS K+ TD G+SKGFGFV + E AQ A+D++NG +N ++++VG +K ER+T
Sbjct: 207 RALSVKVMTDERGRSKGFGFVSYATHEDAQRAVDEMNGKELNGRRIYVGRAQKKGERQT- 265
Query: 203 AIKTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSK 249
+K F N++VKNLD++ DE L+ F +GTITSA VM +G G S+
Sbjct: 266 ELKRHFEQIKQDRVTRYQGVNLYVKNLDDTIDDERLRTEFSPFGTITSAKVMMEG-GHSR 324
Query: 250 CFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKF 309
FGFV F D+AAKAV +NGK + YV AQ+K ER+ L Q+ + M
Sbjct: 325 GFGFVCFSAPDEAAKAVTEMNGKLVTSKPLYVALAQRKEERQAHLTNQYMRRMAN----- 379
Query: 310 QGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRAL 369
I+ + + + + S +T+ PS ++ S + P+ + +
Sbjct: 380 ------IQTFANPVLNPYHQPTSSSRYIMTTV-----PSSQTRTSYYPYGQVPQLRTSSH 428
Query: 370 AEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQ 429
G + P V + K R F+ MR A GP PRM +
Sbjct: 429 WGPPGGRLPPFPTVSGVVRPKTPR-----PPFNPMR-SASGPV--PRM---------MTT 471
Query: 430 QFLYGQAPPAIIPPQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDAS 489
Q + P + P PP P R +Q + + G + + M IP+
Sbjct: 472 QRVVN-PPNQVFGPPRPPF-----IPNLRAVQQYKYAAGVRNPKRFELPMQINIPQPAVH 525
Query: 490 VGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHL 549
+TA + LA+A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+
Sbjct: 526 AAAQEVLTA--SMLADALPQEQKQMLGERLFPLIQVMHPALAGKITGMLLEIDNSELLHM 583
Query: 550 LESPEALKAKVAEAMEVLRSVAQQQA 575
LESPE+L++KV EA+ VL++ ++A
Sbjct: 584 LESPESLRSKVDEAVAVLQAHQVKEA 609
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 108/197 (54%), Gaps = 22/197 (11%)
Query: 21 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYAN 80
GA +F T++Y+ + ++ +++L ++F + G+ LSV+V D RS G+G+V+YA
Sbjct: 175 GARAREF--TNVYIKNFGEDMDNARLGEIFGRFGRALSVKVMTD-ERGRSKGFGFVSYAT 231
Query: 81 PADAARALDVLNFTPLNNKSIRIMYSHR-----------------DPSIRKSGTGNIFIK 123
DA RA+D +N LN + I + + + D R G N+++K
Sbjct: 232 HEDAQRAVDEMNGKELNGRRIYVGRAQKKGERQTELKRHFEQIKQDRVTRYQGV-NLYVK 290
Query: 124 NLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLI 183
NLD +ID + L FS FG I S K+ +G G S+GFGFV F + A A+ ++NG L+
Sbjct: 291 NLDDTIDDERLRTEFSPFGTITSAKVMMEG-GHSRGFGFVCFSAPDEAAKAVTEMNGKLV 349
Query: 184 NDKQVFVGHFLRKQERE 200
K ++V RK+ER+
Sbjct: 350 TSKPLYVALAQRKEERQ 366
>gi|255652857|ref|NP_001157308.1| poly(A) binding protein, cytoplasmic 3 [Mus musculus]
gi|12855391|dbj|BAB30319.1| unnamed protein product [Mus musculus]
gi|26325704|dbj|BAC26606.1| unnamed protein product [Mus musculus]
Length = 643
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 225/411 (54%), Positives = 288/411 (70%), Gaps = 19/411 (4%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL +VT++ LY+ FS G +LS+RV RD TRRSLGY VN+ DA RALD
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVYRDRITRRSLGYASVNFQQLEDAERALDT 71
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF + K +RIM+S RDPS+RKSG GNIF+KNLD+SID K L+DTFS+FGNILSCK+
Sbjct: 72 MNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFVKNLDRSIDSKTLYDTFSAFGNILSCKVV 131
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER--ETVAIKTKF 208
D +G SKG+GFV FE +E A+ AI+K+NGM +ND +VFVG F +++R E A +F
Sbjct: 132 CDENG-SKGYGFVHFETQEEAERAIEKMNGMFLNDHKVFVGRFKSRRDRQAELGARAKEF 190
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NV++KNL E DE L+ +FG +G S VM D GKSK FGFV+FE +DA KAVE
Sbjct: 191 TNVYIKNLGEDMDDERLQDLFGRFGPALSVKVMTDESGKSKGFGFVSFERHEDARKAVEE 250
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQ-----------GLNLYIK 317
+NGK + ++ YVG+AQKK ER+ ELK +F Q MK+ K + G+NLY+K
Sbjct: 251 MNGKDLNGKQIYVGRAQKKVERQTELKHKFGQ-MKQDKHKIERVPQDRSVRCKGVNLYVK 309
Query: 318 NLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMI 377
NL D IDDE+L++ FS FGTITS KV + G SKG GFV FS+PEEA++A+ EMNGK++
Sbjct: 310 NLDDGIDDERLRKEFSPFGTITSAKVTME-GGRSKGFGFVCFSSPEEATKAVTEMNGKIV 368
Query: 378 VSKPLYVAVAQRKEERRARLQAQFSQ-MRPVAMGPSVPPRMPMYPP-GPSG 426
+KPLYVA+AQRKEER+A L Q+ Q M + GP+ P P P GPSG
Sbjct: 369 ATKPLYVALAQRKEERQAHLSNQYMQRMASTSAGPN-PVVSPFQPAQGPSG 418
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 108/298 (36%), Positives = 171/298 (57%), Gaps = 16/298 (5%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFEN 167
+PS ++++ +L + L++ FS G ILS ++ D + +S G+ V F+
Sbjct: 2 NPSDPSYSLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVYRDRITRRSLGYASVNFQQ 61
Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
E A+ A+D +N +I K V + +R+ K+ N+FVKNLD S + L
Sbjct: 62 LEDAERALDTMNFDVIKGKPVRI----MWSQRDPSLRKSGVGNIFVKNLDRSIDSKTLYD 117
Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
F +G I S V+ D +G SK +GFV+FE ++A +A+E +NG +D + +VG+ + +
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEEAERAIEKMNGMFLNDHKVFVGRFKSR 176
Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
+R+ EL + ++ N+YIKNLG+ +DDE+L++LF FG S KVM D
Sbjct: 177 RDRQAELGARAKEFT----------NVYIKNLGEDMDDERLQDLFGRFGPALSVKVMTDE 226
Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
SG SKG GFV+F E+A +A+ EMNGK + K +YV AQ+K ER+ L+ +F QM+
Sbjct: 227 SGKSKGFGFVSFERHEDARKAVEEMNGKDLNGKQIYVGRAQKKVERQTELKHKFGQMK 284
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 50/70 (71%)
Query: 500 STALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAK 559
++ LA+A P+ Q+ +LGE L+ L++ + A K+TGMLLE+D E+ H+LESPE L K
Sbjct: 554 ASMLASAPPQAQKQMLGEWLFSLIQAMHPALAGKITGMLLEIDNIELRHMLESPECLHTK 613
Query: 560 VAEAMEVLRS 569
V EA+ VL++
Sbjct: 614 VDEAIAVLQA 623
>gi|148670144|gb|EDL02091.1| RIKEN cDNA 4932702K14 [Mus musculus]
Length = 642
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 225/411 (54%), Positives = 288/411 (70%), Gaps = 19/411 (4%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL +VT++ LY+ FS G +LS+RV RD TRRSLGY VN+ DA RALD
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVYRDRITRRSLGYASVNFQQLEDAERALDT 71
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF + K +RIM+S RDPS+RKSG GNIF+KNLD+SID K L+DTFS+FGNILSCK+
Sbjct: 72 MNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFVKNLDRSIDSKTLYDTFSAFGNILSCKVV 131
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER--ETVAIKTKF 208
D +G SKG+GFV FE +E A+ AI+K+NGM +ND +VFVG F +++R E A +F
Sbjct: 132 CDENG-SKGYGFVHFETQEEAERAIEKMNGMFLNDHKVFVGRFKSRRDRQAELGARAKEF 190
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NV++KNL E DE L+ +FG +G S VM D GKSK FGFV+FE +DA KAVE
Sbjct: 191 TNVYIKNLGEDMDDERLQDLFGRFGPALSVKVMTDESGKSKGFGFVSFERHEDARKAVEE 250
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQ-----------GLNLYIK 317
+NGK + ++ YVG+AQKK ER+ ELK +F Q MK+ K + G+NLY+K
Sbjct: 251 MNGKDLNGKQIYVGRAQKKVERQTELKHKFGQ-MKQDKHKIERVPQDRSVRCKGVNLYVK 309
Query: 318 NLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMI 377
NL D IDDE+L++ FS FGTITS KV + G SKG GFV FS+PEEA++A+ EMNGK++
Sbjct: 310 NLDDGIDDERLRKEFSPFGTITSAKVTME-GGRSKGFGFVCFSSPEEATKAVTEMNGKIV 368
Query: 378 VSKPLYVAVAQRKEERRARLQAQFSQ-MRPVAMGPSVPPRMPMYPP-GPSG 426
+KPLYVA+AQRKEER+A L Q+ Q M + GP+ P P P GPSG
Sbjct: 369 ATKPLYVALAQRKEERQAHLSNQYMQRMASTSAGPN-PVVSPFQPAQGPSG 418
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/298 (36%), Positives = 171/298 (57%), Gaps = 16/298 (5%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFEN 167
+PS ++++ +L + L++ FS G ILS ++ D + +S G+ V F+
Sbjct: 2 NPSDPSYSLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVYRDRITRRSLGYASVNFQQ 61
Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
E A+ A+D +N +I K V + +R+ K+ N+FVKNLD S + L
Sbjct: 62 LEDAERALDTMNFDVIKGKPVRI----MWSQRDPSLRKSGVGNIFVKNLDRSIDSKTLYD 117
Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
F +G I S V+ D +G SK +GFV+FE ++A +A+E +NG +D + +VG+ + +
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEEAERAIEKMNGMFLNDHKVFVGRFKSR 176
Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
+R+ EL + ++ N+YIKNLG+ +DDE+L++LF FG S KVM D
Sbjct: 177 RDRQAELGARAKEFT----------NVYIKNLGEDMDDERLQDLFGRFGPALSVKVMTDE 226
Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
SG SKG GFV+F E+A +A+ EMNGK + K +YV AQ+K ER+ L+ +F QM+
Sbjct: 227 SGKSKGFGFVSFERHEDARKAVEEMNGKDLNGKQIYVGRAQKKVERQTELKHKFGQMK 284
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 50/70 (71%)
Query: 500 STALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAK 559
++ LA+A P+ Q+ +LGE L+ L++ + A K+TGMLLE+D E+ H+LESPE L K
Sbjct: 553 ASMLASAPPQAQKQMLGEWLFSLIQAMHPALAGKITGMLLEIDNIELRHMLESPECLHTK 612
Query: 560 VAEAMEVLRS 569
V EA+ VL++
Sbjct: 613 VDEAIAVLQA 622
>gi|341884731|gb|EGT40666.1| CBN-PAB-2 protein [Caenorhabditis brenneri]
Length = 707
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 230/463 (49%), Positives = 304/463 (65%), Gaps = 30/463 (6%)
Query: 27 FLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAAR 86
+ SLY+GDL +VT+S L++ FS G VLS+RVCRD ++R SLGY YVN+ PADA R
Sbjct: 59 YSMASLYIGDLHGDVTESMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAER 118
Query: 87 ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
ALD +NF ++ + +RIM+S RDP+ R++G GNIFIKNLD+ ID+K+++DTFS FGNILS
Sbjct: 119 ALDTMNFEIIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSIYDTFSLFGNILS 178
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER--ETVAI 204
CK+ATD G SKG+GFV FE + SAQ AI+K+NGML++DK+VFVG F + +R E
Sbjct: 179 CKVATDDDGNSKGYGFVHFETEASAQTAIEKVNGMLLSDKKVFVGKFQPRAQRMKELGES 238
Query: 205 KTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAK 264
K+ NVFVKN E + LK++F +YG I SAVVM D +GK K FGFV + + + A+K
Sbjct: 239 GLKYTNVFVKNFGEHLDEAKLKEMFSKYGEINSAVVMTDAEGKPKGFGFVAYADPEAASK 298
Query: 265 AVEALNGKKFDDRE--WYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDS 322
AV+ LN + E V +AQKKSER ELK ++E +E V ++QG+NLY+KN+ +
Sbjct: 299 AVDDLNESILEGTELKLSVCRAQKKSERSAELKRKYEALKQERVQRYQGVNLYVKNIEEE 358
Query: 323 IDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPL 382
+ DE L+ F++FGTITS KVM D +G SKG GFV F PEEA+ A+ EMN KMI +KPL
Sbjct: 359 LTDEGLRAHFAQFGTITSAKVMVDENGRSKGFGFVCFEKPEEATAAVTEMNSKMIGAKPL 418
Query: 383 YVAVAQRKEERRARLQAQFSQ-MRPVAMGP----SVPPRMPMYPPGPSGLGQQFLYGQAP 437
YVA+AQRKE+RRA+L +Q+ Q + + MG VP +Y P GQQ Y P
Sbjct: 419 YVALAQRKEDRRAQLASQYMQRLATLRMGQQAAGGVPGMTQIYQP-----GQQGYYVPNP 473
Query: 438 ------PAIIPPQMPPRGHA----------YRYPLGRNMQDFP 464
PA P P RG +YP + Q FP
Sbjct: 474 MAAPGRPAFQPQAAPMRGPPGQRMFNNQVFMQYPFNQQRQGFP 516
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
Query: 497 TALSTALANASPEQQRTLLGESLYPLVEQL--ERDAAAKVTGMLLEMDQTEVLHLLESPE 554
T S LA A+P++Q+ LLGE +Y L+E++ A K+TGM+LE+D E++ +L+ +
Sbjct: 620 TLTSHMLAQAAPQEQKQLLGERIYALIEKMFPNHKDAGKITGMMLEIDNAELIMMLQDAD 679
Query: 555 ALKAKVAEAMEVL 567
++KV EA VL
Sbjct: 680 LFRSKVEEAFTVL 692
>gi|322711066|gb|EFZ02640.1| poly(A) RNA binding protein [Metarhizium anisopliae ARSEF 23]
Length = 743
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 218/464 (46%), Positives = 304/464 (65%), Gaps = 59/464 (12%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVG+LD +VT++ L++LFSQ+G V S+RVCRD TRRSLGY YVNY + AD +AL
Sbjct: 60 SASLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNSTADGEKAL 119
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LN+T + + RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++FGNILSCK
Sbjct: 120 EELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCK 179
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKT 206
+A D +G SKG+GFV +E E+A AI +NGML+N+K+V+VGH + K++R++ +K
Sbjct: 180 VAQDENGNSKGYGFVHYETDEAAHQAIKHVNGMLLNEKKVYVGHHIPKKDRQSKFEEMKA 239
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
F N+++KN+ +D++ +++F +YG ITS+ + RD +GKS+ FGFVNF + AAKAV
Sbjct: 240 NFTNIYIKNISTEASDDEFRELFEKYGDITSSSLARDQEGKSRGFGFVNFTTHESAAKAV 299
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
E L+GK F ++ YVG+AQKK ERE+EL+ +E A E +K+QG+NLYIKNL D +DDE
Sbjct: 300 EELHGKDFRGQDLYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLDDDVDDE 359
Query: 327 KLKELFSEFGTITSCKVMRD-PSGISKGS------------------------------- 354
KL+++F+EFG ITS KVMRD PS S
Sbjct: 360 KLRQMFAEFGPITSAKVMRDAPSDGSDDDKEKEEDNEKEPEAKEEAKETEEEDADKKADK 419
Query: 355 ------------GFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFS 402
GFV FS P++A++A+AEMN +MI KPLYVA+AQRK+ R+++L+A
Sbjct: 420 KGDKKLGKSKGFGFVCFSNPDDATKAVAEMNQRMINGKPLYVALAQRKDVRKSQLEASIQ 479
Query: 403 QMRPVAMGPSVP----PRMPMYPPGPSGLGQQFLYGQAPPAIIP 442
+ M + P+ M PP YGQ P IP
Sbjct: 480 ARNQLRMQQAAAAAGMPQQYMQPP--------VFYGQQ-PGFIP 514
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 53/80 (66%)
Query: 497 TALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEAL 556
+ L + LA A P QQ+ +LGE ++P ++ + + A K+TGMLLEM+ +E+++L+E AL
Sbjct: 648 SVLQSQLAGAQPAQQKQILGEIIFPKIQAINSELAGKITGMLLEMENSELVNLIEDDVAL 707
Query: 557 KAKVAEAMEVLRSVAQQQAN 576
KAKV EA+ V + Q N
Sbjct: 708 KAKVDEALAVYDEYVKSQGN 727
>gi|402085655|gb|EJT80553.1| polyadenylate-binding protein [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 773
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 235/517 (45%), Positives = 320/517 (61%), Gaps = 95/517 (18%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVG+LD +VT++ L++LFSQ+G V S+RVCRD TRRSLGY YVNY +D +AL
Sbjct: 60 SASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTSDGEKAL 119
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
D LN+T + + RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++FGNILSCK
Sbjct: 120 DELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCK 179
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKT 206
+A D G SKG+GFV +E E+A AI +NGML+N+K+V+VGH + K++R++ +K
Sbjct: 180 VAQDEHGNSKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKDRQSKFEEMKA 239
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGD-GKSKCFGFVNFENADDAAKA 265
F N++VKN+ TD+D + +F ++G +TS+ + RD + GKS+ FGFVNF + +DA+KA
Sbjct: 240 NFTNIYVKNIQLDVTDDDFRALFEKFGHVTSSSLARDQETGKSRGFGFVNFTSHEDASKA 299
Query: 266 VEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDD 325
VE LN K+F + YVG+AQKK ERE+EL+ +E A +E K+QG+NLYIKNL D +DD
Sbjct: 300 VEELNEKEFHGQNLYVGRAQKKHEREEELRRSYEAARQEKASKYQGVNLYIKNLDDEVDD 359
Query: 326 EKLKELFSEFGTITSCKVMR--------DPS----------------------------- 348
+KL++LFSEFG ITS KVMR +P
Sbjct: 360 DKLRQLFSEFGPITSAKVMRETLAEGADEPEAKDAADAKENVKEDEEAAKTEGDEGDAKA 419
Query: 349 ------GISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQF- 401
G SKG GFV F P++A++A+AEMN +M+ KPLYVA+AQRK+ R+ +L+A
Sbjct: 420 DKKPKLGKSKGFGFVCFGNPDDATKAVAEMNQRMVNGKPLYVALAQRKDVRKNQLEASIQ 479
Query: 402 --SQMR-----------------PVAMGPS-----VPPR----MPMYPPG---------- 423
+Q+R PV GP +PP MP PG
Sbjct: 480 ARNQLRMQQAAAAAGMPQQFMQAPVFYGPGSQPGFMPPAGGRGMPFPQPGMGLPAVQGGR 539
Query: 424 ----PSGL-GQQFLYG----QAPPAI-IPPQMPPRGH 450
P+G GQQ G Q PP IP Q PP+G
Sbjct: 540 PGQFPAGYAGQQGGRGGLPQQIPPMYGIPGQFPPQGQ 576
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 54/95 (56%)
Query: 486 RDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTE 545
RDA+ + + A +P QQ+ +LGE ++P ++ + + A K+TGMLLEM+ E
Sbjct: 665 RDAAPAEGASVLQTQLAAVGNNPGQQKQILGEVIFPKIQAIHPELAGKITGMLLEMENAE 724
Query: 546 VLHLLESPEALKAKVAEAMEVLRSVAQQQANNPAD 580
++ L+E+ +L+AKV EA+ V + Q D
Sbjct: 725 LVALIENEGSLRAKVDEALAVYDDYVRAQGGEAGD 759
>gi|299473651|emb|CBN78045.1| poly(A) binding protein [Ectocarpus siliculosus]
Length = 688
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 225/451 (49%), Positives = 306/451 (67%), Gaps = 36/451 (7%)
Query: 27 FLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAAR 86
+ + SLYVGDL +V ++ L+++FSQVG V S+RVCRD TRRSLGY YVN+ N ADA R
Sbjct: 39 YHSASLYVGDLSKDVAEATLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAER 98
Query: 87 ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
ALD +NFT + +++ RIM+S RDPS+R+SG GNIF+KNLD+++D+KAL+DTFS FGNILS
Sbjct: 99 ALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILS 158
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKT 206
CK+ATD +G+SKG+G+V +E SA AI K+NGMLI KQV VGHF+R+ R A +
Sbjct: 159 CKVATDDAGESKGYGYVHYEGGVSANMAIAKINGMLIAGKQVHVGHFVRRDNR---AGQA 215
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSA---VVMRDGDG------------KSKCF 251
+ N++VK L S D L++ F ++G +TS V ++G G KS+ F
Sbjct: 216 DWTNLYVKGLPSSWDDAKLREEFEKHGAVTSCKVQVAPQEGQGDESKEKGKGGEGKSRGF 275
Query: 252 GFVNFENADDAAKAVEALNGKKFDDRE----WYVGKAQKKSEREQELKGQFEQAMKETVD 307
GFVNFE + A KA+EALN + D E Y +AQKKSER +EL+ + +Q E ++
Sbjct: 276 GFVNFEEHESAVKAIEALNNAEMPDGEGTTTLYCARAQKKSERARELQSKHDQVKMERMN 335
Query: 308 KFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPS--GISKGSGFVAFSTPEEA 365
KFQG+N+Y+KNL + + ++ ++E F+ +GTITS +VM D S SKG GFV FS PEEA
Sbjct: 336 KFQGVNVYVKNLDEGVTEDAMREAFAPYGTITSARVMVDNSNNNQSKGFGFVCFSAPEEA 395
Query: 366 SRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPR-MPMYPPGP 424
++A+ EMNGKM+++KP+YVA+AQR+E RR +L+AQF+Q R M PPR MPM P
Sbjct: 396 TKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQ-RTGGM----PPRGMPMAPGAQ 450
Query: 425 SGLGQQFLYG------QAPPAIIPPQMPPRG 449
G + G Q P + PQM PRG
Sbjct: 451 GMYGMPYWMGAQPGMPQQPRQFMMPQMMPRG 481
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 50/68 (73%), Gaps = 2/68 (2%)
Query: 510 QQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRS 569
+Q+ ++GE LYPL+ + + A K+TGMLLEMD E+LHLLESP++L AK+ EA++VL
Sbjct: 623 KQKNMIGERLYPLIYEGQPALAGKITGMLLEMDNGELLHLLESPDSLAAKINEALQVLSE 682
Query: 570 VAQQQANN 577
QQ NN
Sbjct: 683 --HQQENN 688
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Query: 306 VDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP-SGISKGSGFVAFSTPEE 364
+ + +LY+ +L + + L E+FS+ G + S +V RD + S G +V F +
Sbjct: 36 IAPYHSASLYVGDLSKDVAEATLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVAD 95
Query: 365 ASRALAEMNGKMIVSKPLYVAVAQRKEERR 394
A RAL MN I + + +QR R
Sbjct: 96 AERALDTMNFTTIKDQACRIMWSQRDPSLR 125
>gi|397502367|ref|XP_003821832.1| PREDICTED: polyadenylate-binding protein 1 [Pan paniscus]
Length = 656
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 219/426 (51%), Positives = 289/426 (67%), Gaps = 24/426 (5%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLST------RRSLGYGYV 76
S + SLYVGDL +VT++ LY+ FS G +LS+RVCRD RRS +
Sbjct: 4 SAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDXXXXXXXRWRRSHHPELL 63
Query: 77 NYANPAD--------------AARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFI 122
P + + RALD +NF + K +RIM+S RDPS+RKSG GNIFI
Sbjct: 64 PAPQPGEEVQFCARKIPRVEPSERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFI 123
Query: 123 KNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGML 182
KNLDKSID+KAL+DTFS+FGNILSCK+ D +G SKG+GFV FE +E+A+ AI+K+NGML
Sbjct: 124 KNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGML 182
Query: 183 INDKQVFVGHFLRKQERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVV 240
+ND++VFVG F ++ERE A +F NV++KN E DE LK +FG++G S V
Sbjct: 183 LNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKV 242
Query: 241 MRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQ 300
M D GKSK FGFV+FE +DA KAV+ +NGK+ + ++ YVG+AQKK ER+ ELK +FEQ
Sbjct: 243 MTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQ 302
Query: 301 AMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFS 360
++ + ++QG+NLY+KNL D IDDE+L++ FS FGTITS KVM + G SKG GFV FS
Sbjct: 303 MKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFS 361
Query: 361 TPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMY 420
+PEEA++A+ EMNG+++ +KPLYVA+AQRKEER+A L Q+ Q P P
Sbjct: 362 SPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQ 421
Query: 421 PPGPSG 426
P PSG
Sbjct: 422 PAPPSG 427
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 107/318 (33%), Positives = 169/318 (53%), Gaps = 36/318 (11%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGS-------------- 154
+PS ++++ +L + L++ FS G ILS ++ D
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDXXXXXXXRWRRSHHPE 61
Query: 155 -------GQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK 207
G+ F + E ++ A+D +N +I K V + +R+ K+
Sbjct: 62 LLPAPQPGEEVQFCARKIPRVEPSERALDTMNFDVIKGKPVRIMW----SQRDPSLRKSG 117
Query: 208 FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVE 267
N+F+KNLD+S ++ L F +G I S V+ D +G SK +GFV+FE + A +A+E
Sbjct: 118 VGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIE 176
Query: 268 ALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEK 327
+NG +DR+ +VG+ + + ERE EL + ++ N+YIKN G+ +DDE+
Sbjct: 177 KMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFT----------NVYIKNFGEDMDDER 226
Query: 328 LKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 387
LK+LF +FG S KVM D SG SKG GFV+F E+A +A+ EMNGK + K +YV A
Sbjct: 227 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRA 286
Query: 388 QRKEERRARLQAQFSQMR 405
Q+K ER+ L+ +F QM+
Sbjct: 287 QKKVERQTELKRKFEQMK 304
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA+A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 564 PLTA--SMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPE 621
Query: 555 ALKAKVAEAMEVLRSVAQQQA 575
+L++KV EA+ VL++ ++A
Sbjct: 622 SLRSKVDEAVAVLQAHQAKEA 642
>gi|157818977|ref|NP_001099678.1| poly(A) binding protein, cytoplasmic 6 [Rattus norvegicus]
gi|149027506|gb|EDL83096.1| similar to RIKEN cDNA 4932702K14 (predicted) [Rattus norvegicus]
gi|197246058|gb|AAI68959.1| Poly(A) binding protein, cytoplasmic 3 [Rattus norvegicus]
Length = 643
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 221/420 (52%), Positives = 293/420 (69%), Gaps = 18/420 (4%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL +VT++ LY+ FS G +LS+RV RD +TRRSLGY VN+ DA RALD
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVYRDRTTRRSLGYASVNFQQLEDAERALDT 71
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF + K +RIM+S RDPS+RKSG GNIF+KNLD+SID K L+DTFS+FGNILSCK+
Sbjct: 72 MNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFVKNLDRSIDSKTLYDTFSAFGNILSCKVV 131
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER--ETVAIKTKF 208
D +G SKG+GFV FE +E A+ AI+K+NGM +ND++VFVG F +++R E A +F
Sbjct: 132 CDENG-SKGYGFVHFETQEEAERAIEKMNGMFLNDRKVFVGRFKSRRDRQAELGARAKEF 190
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NV++KNL E DE L+ +F +G S VM D GKSK FGFV+FE +DA KAV+
Sbjct: 191 TNVYIKNLGEDMDDERLQDLFSRFGPALSVKVMTDESGKSKGFGFVSFERHEDARKAVDE 250
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQF----------EQAMKETVDKFQGLNLYIKN 318
+NGK + ++ YVG+AQKK ER+ ELK +F EQ ++ + QG+NLY+KN
Sbjct: 251 MNGKDLNGKQIYVGRAQKKVERQTELKHKFGQMKQDKPKIEQVPQDRSVRCQGVNLYVKN 310
Query: 319 LGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIV 378
L D IDDE+L++ FS FGTITS KV + G SKG GFV FS+PEEA++A+ EMNG+++
Sbjct: 311 LDDGIDDERLRKEFSPFGTITSAKVTME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVA 369
Query: 379 SKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVP-PRMPMYPPGPSGLGQQFLYGQAP 437
+KPLYVA+AQRKEER+A L Q+ M+ +A +VP P + + P GL F+ AP
Sbjct: 370 TKPLYVALAQRKEERQAHLSNQY--MQRMASTSAVPNPGINPFQPA-QGLSGYFMTATAP 426
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 110/298 (36%), Positives = 173/298 (58%), Gaps = 16/298 (5%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATD-GSGQSKGFGFVQFEN 167
+PS ++++ +L + L++ FS G ILS ++ D + +S G+ V F+
Sbjct: 2 NPSDPSYSLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVYRDRTTRRSLGYASVNFQQ 61
Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
E A+ A+D +N +I K V + +R+ K+ N+FVKNLD S + L
Sbjct: 62 LEDAERALDTMNFDVIKGKPVRI----MWSQRDPSLRKSGVGNIFVKNLDRSIDSKTLYD 117
Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
F +G I S V+ D +G SK +GFV+FE ++A +A+E +NG +DR+ +VG+ + +
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEEAERAIEKMNGMFLNDRKVFVGRFKSR 176
Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
+R+ EL + ++ N+YIKNLG+ +DDE+L++LFS FG S KVM D
Sbjct: 177 RDRQAELGARAKEFT----------NVYIKNLGEDMDDERLQDLFSRFGPALSVKVMTDE 226
Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
SG SKG GFV+F E+A +A+ EMNGK + K +YV AQ+K ER+ L+ +F QM+
Sbjct: 227 SGKSKGFGFVSFERHEDARKAVDEMNGKDLNGKQIYVGRAQKKVERQTELKHKFGQMK 284
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 48/67 (71%)
Query: 503 LANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAE 562
LA+A P+ Q+ +LGE L+ L++ + A K+TGMLLE+D E+ H+LESPE L KV E
Sbjct: 557 LASAPPQAQKQMLGEWLFSLIQAMHPALAGKITGMLLEIDNLELRHMLESPECLHTKVDE 616
Query: 563 AMEVLRS 569
A+ VL++
Sbjct: 617 AIAVLQA 623
>gi|358386241|gb|EHK23837.1| hypothetical protein TRIVIDRAFT_169516 [Trichoderma virens Gv29-8]
Length = 747
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 218/462 (47%), Positives = 303/462 (65%), Gaps = 55/462 (11%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVG+LD +VT++ L++LFSQ+G V S+RVCRD TRRSLGY YVNY + D +AL
Sbjct: 58 SASLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNSTPDGEKAL 117
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LN+T + + RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++FGNILSCK
Sbjct: 118 EELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCK 177
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKT 206
+A D +G SKG+GFV +E E+A AI +NGML+N+K+V+VG+ + K++R++ +K
Sbjct: 178 VAQDENGNSKGYGFVHYETDEAAAQAIKHVNGMLLNEKKVYVGYHIPKKDRQSKFEEMKA 237
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
F NV+VKN+ TD++ +++F ++G +TS+ + RD +GK + FGFVNF + A KAV
Sbjct: 238 NFTNVYVKNIGPDVTDDEFRELFEKFGDVTSSSLARDQEGKPRGFGFVNFTTHEAAFKAV 297
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
E LNGK F +E YVG+AQKK ERE+EL+ +E A E +K+QG+NLYIKNL D +DDE
Sbjct: 298 EDLNGKDFRGQELYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLDDDVDDE 357
Query: 327 KLKELFSEFGTITSCKVMRDPS-------------------------------------- 348
KL+++F+EFG ITS KVMRD
Sbjct: 358 KLRQMFAEFGPITSAKVMRDTPQEGEEEVKDQEKDKENQKEAENEAESAESAEKKAEKKS 417
Query: 349 ----GISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQM 404
G SKG GFV FS P++A++A+AEMN +MI +KPLYVA+AQRK+ R+++L+A
Sbjct: 418 DKKLGKSKGFGFVCFSNPDDATKAVAEMNQRMINNKPLYVALAQRKDVRKSQLEASIQAR 477
Query: 405 RPVAMGPSVP----PRMPMYPPGPSGLGQQFLYGQAPPAIIP 442
+ M + P+ M PP GQQ P IP
Sbjct: 478 NQLRMQQAAAAAGMPQQYMQPPVFYAPGQQ-------PGFIP 512
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 43/62 (69%)
Query: 514 LLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQ 573
+LGE ++P ++ + + A K+TGMLLEMD +E+++L+E ALKAKV EA+ V +
Sbjct: 674 ILGELIFPKIQAINAELAGKITGMLLEMDNSELVNLIEDEAALKAKVDEALAVYDEYVKS 733
Query: 574 QA 575
QA
Sbjct: 734 QA 735
>gi|71993203|ref|NP_001021709.1| Protein PAB-1, isoform a [Caenorhabditis elegans]
gi|3880681|emb|CAA21572.1| Protein PAB-1, isoform a [Caenorhabditis elegans]
Length = 646
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 219/411 (53%), Positives = 289/411 (70%), Gaps = 7/411 (1%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
+G+ + SLYVGDL +V +S L++ FS G VLS+RVCRD +TR SLGY YVN+ PA
Sbjct: 25 TGSSYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPA 84
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
DA RA+D +NF L+ K +RIM+S RDP++R+SG GNIFIKNLDK ID+K+++DTFS FG
Sbjct: 85 DAERAMDTMNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFG 144
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHF--LRKQERE 200
NILSCK+A D G SKG+GFV FE +E+AQNAI K+NGML+ K+VFVG F ++ RE
Sbjct: 145 NILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFVGKFQPRAQRNRE 204
Query: 201 TVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
+F NV+VKN + E L+K+F ++G ITS VM +GKSK FGFV F N +
Sbjct: 205 LGETAKQFTNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTV-EGKSKGFGFVAFANPE 263
Query: 261 DAAKAVEALNGKKFD--DREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKN 318
+A AV+AL+ + D + +V +AQKKSER ELK + EQ E + K+QG+NLY+KN
Sbjct: 264 EAETAVQALHDSTIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKN 323
Query: 319 LGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIV 378
L +++DD+ LK+ F +G ITS KVM D +G SKG GFV F PEEA+ A+ EMN KM+
Sbjct: 324 LDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMNSKMVC 383
Query: 379 SKPLYVAVAQRKEERRARLQAQFSQ-MRPVAMGPSVPPRMPMYPPGPSGLG 428
SKPLYVA+AQRKE+RRA+L +Q+ Q + + M +V P MY P G G
Sbjct: 384 SKPLYVAIAQRKEDRRAQLASQYMQRLASMRMHGNV-PGAAMYNPTQPGPG 433
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 58/87 (66%), Gaps = 6/87 (6%)
Query: 490 VGQPMPITALSTALANASPEQQRTLLGESLYPLVEQL---ERDAAAKVTGMLLEMDQTEV 546
+G P+T S LA A+P++Q+ LLGE +Y L+E+L +DA K+TGM+LE+D +E+
Sbjct: 563 IGGQEPLT--SAMLAAAAPQEQKQLLGERIYALIEKLYPGHKDAG-KITGMMLEIDNSEL 619
Query: 547 LHLLESPEALKAKVAEAMEVLRSVAQQ 573
+ +L+ E ++KV EA VL S +Q
Sbjct: 620 IMMLQDSELFRSKVDEAASVLVSAQKQ 646
>gi|405973173|gb|EKC37903.1| Polyadenylate-binding protein 4 [Crassostrea gigas]
Length = 465
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 218/370 (58%), Positives = 279/370 (75%), Gaps = 5/370 (1%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYV DL +VT+ L+ FS G VLSVRVCRD+ TRRSLGY YVN+ PADA RALD
Sbjct: 11 SLYVRDLHPDVTEDMLFKKFSTAGPVLSVRVCRDMITRRSLGYAYVNFHQPADAERALDT 70
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF + + IRI + RDPS+RKSG GN+FIK LDKSID+KAL+DTFS+FGNI SCKI
Sbjct: 71 MNFDIIKGRPIRITWYQRDPSLRKSGVGNVFIKKLDKSIDNKALYDTFSAFGNISSCKIV 130
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAI--KTKF 208
D G S+G+GFV FE E+A+ AI+K+NGML+N K+VFVG F+ ++ER V KF
Sbjct: 131 CDEHG-SRGYGFVHFETDEAARIAIEKVNGMLLNGKKVFVGRFMSRRERLEVLDLGMRKF 189
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVM-RDGDGKSKCFGFVNFENADDAAKAVE 267
NNV+VKNL E T DE L++IF YG I SA VM D KSK FGFV+FEN + A KAVE
Sbjct: 190 NNVYVKNLSEETDDEKLREIFELYGKIISAKVMIDDSSRKSKQFGFVSFENPEAAKKAVE 249
Query: 268 ALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEK 327
ALNG + YVG+AQ K ER+ ELK +FE+ KE ++++QG+NL++KNL D+IDD++
Sbjct: 250 ALNGNDNAGKILYVGRAQTKIERQAELKEKFERIRKERINRYQGVNLFVKNLDDNIDDKR 309
Query: 328 LKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 387
L++ F++FGTITS KVM + +G SKG GFV FS+PEEA++A+ EMN K+I ++PLYVA+A
Sbjct: 310 LRKEFAQFGTITSAKVMTE-NGRSKGFGFVYFSSPEEATKAIVEMNEKIIEARPLYVALA 368
Query: 388 QRKEERRARL 397
QRKE+R+A L
Sbjct: 369 QRKEDRKAYL 378
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
Query: 2 AQIQVQHQAQMSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRV 61
AQ +++ QA++ N++ +L+V +LD N+ D +L F+Q G + S +V
Sbjct: 266 AQTKIERQAELKEKFERIRKERINRYQGVNLFVKNLDDNIDDKRLRKEFAQFGTITSAKV 325
Query: 62 CRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHR 108
+ RS G+G+V +++P +A +A+ +N + + + + + R
Sbjct: 326 MTE--NGRSKGFGFVYFSSPEEATKAIVEMNEKIIEARPLYVALAQR 370
>gi|148223119|ref|NP_001088471.1| uncharacterized protein LOC495336 [Xenopus laevis]
gi|54311231|gb|AAH84798.1| LOC495336 protein [Xenopus laevis]
Length = 711
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 209/395 (52%), Positives = 283/395 (71%), Gaps = 4/395 (1%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
TSLYVGDL ++ D QL FS++G V VCRD+++R+SLGYGYVN+ +P DA RAL+
Sbjct: 2 TSLYVGDLHPDINDDQLRMKFSEIGPVAVAHVCRDVTSRKSLGYGYVNFEDPKDAERALE 61
Query: 90 VLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKI 149
+N+ + + IRIM+S RDPS+RKSG GNIFIKNL K+I+ K L+DTFS FG ILSCKI
Sbjct: 62 QMNYEVVMGRPIRIMWSQRDPSLRKSGLGNIFIKNLAKTIEQKELYDTFSLFGRILSCKI 121
Query: 150 ATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFN 209
A D +G SKG+GFV FEN+E A+ AI K+N M I K V+VG+F+ + +R++ K KFN
Sbjct: 122 AMDENGNSKGYGFVHFENEECAKRAIQKVNNMSICGKVVYVGNFIPRSDRKSQNRKQKFN 181
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEAL 269
N++VKN T DE LK++F E+G I SA VM+D +GKSK FGFV + N + A AV A+
Sbjct: 182 NIYVKNFPPETDDEKLKEMFTEFGEIKSACVMKDSEGKSKGFGFVCYLNPEHAEAAVAAM 241
Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKF-QGLNLYIKNLGDSIDDEKL 328
+GK+ R Y +AQ+K ER++ELK + E+ E K+ +NLY+KNL D IDDE+L
Sbjct: 242 HGKEIGGRSLYASRAQRKEERQEELKLRLEKQKAERRSKYVSNVNLYVKNLDDEIDDERL 301
Query: 329 KELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
KE+FS++G I+S KVM D + SKG GFV F+ PE+A++A+ E NG++ SKPLYVA+AQ
Sbjct: 302 KEIFSKYGPISSAKVMTDSNNRSKGFGFVCFTNPEQATKAVTEANGRVEYSKPLYVAIAQ 361
Query: 389 RKEERRARLQAQFSQMRPVAMGPSVPPRMP--MYP 421
RKE+RRA L A+ +Q A+ + PP +P M+P
Sbjct: 362 RKEDRRAELAAKHTQ-HLNALRSTAPPMIPALMHP 395
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 43/66 (65%)
Query: 503 LANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAE 562
LA S + Q+ LGE L+PL+ + A K+TGMLL +D EV+H+LES + L+ K+ E
Sbjct: 598 LARLSEDDQKRALGEKLFPLIREQYPQLAHKLTGMLLGLDIPEVIHMLESKDTLQEKLQE 657
Query: 563 AMEVLR 568
+ VLR
Sbjct: 658 GINVLR 663
>gi|323448756|gb|EGB04650.1| hypothetical protein AURANDRAFT_55048 [Aureococcus anophagefferens]
Length = 604
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 223/456 (48%), Positives = 311/456 (68%), Gaps = 31/456 (6%)
Query: 21 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYAN 80
G S F + SLYVGDL + ++ L+++F+ VG V S+RVCRD TRRSLGY YVN+ N
Sbjct: 3 GGSTVPFHSASLYVGDLATDASEGLLFEIFNTVGPVASIRVCRDAVTRRSLGYAYVNFHN 62
Query: 81 PADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSS 140
+DA RALD +N+T + +K RIM+S RDP++RKSG GN+F+KNLD SIDHKAL DTFS
Sbjct: 63 VSDAERALDTMNYTLIKSKPCRIMWSQRDPTLRKSGVGNVFVKNLDASIDHKALFDTFSL 122
Query: 141 FGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERE 200
FGNILSCK+ATD +G+S+G+G+V +E++++A +AI+K+N M I DK+V+VGHF+R+ ER
Sbjct: 123 FGNILSCKVATDEAGRSQGYGYVHYESEDAATDAINKINSMTICDKEVYVGHFVRRTERS 182
Query: 201 TVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
++ + N++VKN +E L+K F +G ITS DG + FG+VNFE D
Sbjct: 183 G---QSDWTNLYVKNFPADWDEETLRKAFETFGAITSCKAAAAADGSA--FGWVNFEAHD 237
Query: 261 DAAKAVEALNG-----------KKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKF 309
A A++ALNG +VG+AQKK ERE+ELK +F+ A E + K+
Sbjct: 238 AAVAAMDALNGIAELPGQAGGAPTTLKAPLFVGRAQKKIERERELKAKFDAAKIERIKKY 297
Query: 310 QGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP-SGISKGSGFVAFSTPEEASRA 368
QG+NL++KNL D +DD++L+E F+E+GTITS +VMR+P +G S+G GFV FS+PEEA++A
Sbjct: 298 QGVNLFVKNLDDGLDDDQLRENFAEYGTITSARVMREPATGTSRGFGFVCFSSPEEAAKA 357
Query: 369 LAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR--------PVAMGPS-VPPRMP- 418
+ EMN K+++ KP++VA+AQRKE RRA+L+AQ +Q R P AMGP+ VPP P
Sbjct: 358 VTEMNNKLVLGKPIFVALAQRKEVRRAQLEAQHAQRRTTAPYGAHPGAMGPAGVPPHAPQ 417
Query: 419 -MYPP---GPSGLGQQFLYGQAPPAIIPPQMPPRGH 450
++P P G +Y P P M P+GH
Sbjct: 418 GLHPAHLGAPYGTAMPIMYAAGAPNGHPMGMTPQGH 453
>gi|451854943|gb|EMD68235.1| hypothetical protein COCSADRAFT_270468 [Cochliobolus sativus
ND90Pr]
Length = 749
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 216/444 (48%), Positives = 293/444 (65%), Gaps = 55/444 (12%)
Query: 10 AQMSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRR 69
AQ P +A + NQ + SLYVG+LD +VT++ L++LFS +GQV S+RVCRD TRR
Sbjct: 29 AQAEAPTPTSAAPAHNQN-SASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRR 87
Query: 70 SLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSI 129
SLGY YVNY + D +AL+ LN+T + K RIM+S RDP++RK+G GN+FIKNLD +I
Sbjct: 88 SLGYAYVNYNSSEDGEKALEELNYTVIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDHAI 147
Query: 130 DHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVF 189
D+KALHDTF++FGNILSCK+A D G SKG+GFV +E E+A NAI +NGML+N+K+VF
Sbjct: 148 DNKALHDTFAAFGNILSCKVAQDELGNSKGYGFVHYETAEAANNAIKHVNGMLLNEKKVF 207
Query: 190 VGHFLRKQERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGK 247
VGH + K+ER + +K F N++VKN+D +DE+ +++F ++G ITSA + RD GK
Sbjct: 208 VGHHIPKKERMSKFEEMKANFTNIYVKNIDLDVSDEEFRELFEKHGDITSASIARDEQGK 267
Query: 248 SKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVD 307
S+ FGFVN+ + A+ AV+ALN F ++ YVG+AQKK ERE+EL+ Q+E A E
Sbjct: 268 SRGFGFVNYIKHEAASAAVDALNDTDFRGQKLYVGRAQKKHEREEELRKQYEAARLEKQS 327
Query: 308 KFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRD--PSGISKGSG---------- 355
K+QG+NLYIKNL D +DDEKL+++F+ FGTITS KVMRD P+ S+ G
Sbjct: 328 KYQGVNLYIKNLNDDVDDEKLRDMFTPFGTITSAKVMRDAMPAERSETPGDEKKEEAKEE 387
Query: 356 ----------------------------------------FVAFSTPEEASRALAEMNGK 375
FV FS P+EA++A+ EMN K
Sbjct: 388 SEKTEESNEGADDKKDENKPGEKVTIKGEKKILGKSKGFGFVCFSNPDEATKAVTEMNQK 447
Query: 376 MIVSKPLYVAVAQRKEERRARLQA 399
MI KPLYVA+AQRK+ R+ +L+A
Sbjct: 448 MIEGKPLYVALAQRKDVRKNQLEA 471
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 153/293 (52%), Gaps = 21/293 (7%)
Query: 117 TGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAI 175
+ ++++ LD S+ L + FSS G + S ++ D + +S G+ +V + + E + A+
Sbjct: 47 SASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSSEDGEKAL 106
Query: 176 DKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTI 235
++LN +I K + +R+ KT NVF+KNLD + ++ L F +G I
Sbjct: 107 EELNYTVIKGKPCRI----MWSQRDPALRKTGQGNVFIKNLDHAIDNKALHDTFAAFGNI 162
Query: 236 TSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSERE---Q 292
S V +D G SK +GFV++E A+ A A++ +NG ++++ +VG K ER +
Sbjct: 163 LSCKVAQDELGNSKGYGFVHYETAEAANNAIKHVNGMLLNEKKVFVGHHIPKKERMSKFE 222
Query: 293 ELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISK 352
E+K F N+Y+KN+ + DE+ +ELF + G ITS + RD G S+
Sbjct: 223 EMKANF-------------TNIYVKNIDLDVSDEEFRELFEKHGDITSASIARDEQGKSR 269
Query: 353 GSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
G GFV + E AS A+ +N + LYV AQ+K ER L+ Q+ R
Sbjct: 270 GFGFVNYIKHEAASAAVDALNDTDFRGQKLYVGRAQKKHEREEELRKQYEAAR 322
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/341 (29%), Positives = 158/341 (46%), Gaps = 75/341 (21%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ +LD + + L+D F+ G +LS +V +D S GYG+V+Y A A+
Sbjct: 137 NVFIKNLDHAIDNKALHDTFAAFGNILSCKVAQD-ELGNSKGYGFVHYETAEAANNAIKH 195
Query: 91 LNFTPLNNKSIRIMYSHRDPSIR--------KSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
+N LN K ++ H P K+ NI++KN+D + + + F G
Sbjct: 196 VNGMLLNEK--KVFVGHHIPKKERMSKFEEMKANFTNIYVKNIDLDVSDEEFRELFEKHG 253
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET- 201
+I S IA D G+S+GFGFV + E+A A+D LN ++++VG +K ERE
Sbjct: 254 DITSASIARDEQGKSRGFGFVNYIKHEAASAAVDALNDTDFRGQKLYVGRAQKKHEREEE 313
Query: 202 ---------VAIKTKFN--NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD------- 243
+ ++K+ N+++KNL++ DE L+ +F +GTITSA VMRD
Sbjct: 314 LRKQYEAARLEKQSKYQGVNLYIKNLNDDVDDEKLRDMFTPFGTITSAKVMRDAMPAERS 373
Query: 244 ---GD------------------------------------------GKSKCFGFVNFEN 258
GD GKSK FGFV F N
Sbjct: 374 ETPGDEKKEEAKEESEKTEESNEGADDKKDENKPGEKVTIKGEKKILGKSKGFGFVCFSN 433
Query: 259 ADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFE 299
D+A KAV +N K + + YV AQ+K R+ +L+ +
Sbjct: 434 PDEATKAVTEMNQKMIEGKPLYVALAQRKDVRKNQLEATIQ 474
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 50/66 (75%)
Query: 501 TALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKV 560
+AL+ A+P QQ+ +LGE+LYP + +++ + A K+TGMLLEMD +E+++L AL+AKV
Sbjct: 658 SALSGAAPGQQKQMLGEALYPKIAEMQPELAGKITGMLLEMDNSELINLTSDEAALRAKV 717
Query: 561 AEAMEV 566
EAM V
Sbjct: 718 EEAMSV 723
>gi|17567133|ref|NP_510260.1| Protein PAB-2, isoform a [Caenorhabditis elegans]
gi|3876085|emb|CAA90444.1| Protein PAB-2, isoform a [Caenorhabditis elegans]
Length = 692
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 213/408 (52%), Positives = 285/408 (69%), Gaps = 8/408 (1%)
Query: 27 FLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAAR 86
+ SLY+GDL +V+++ L++ FS G VLS+RVCRD ++R SLGY YVN+ PADA R
Sbjct: 54 YSMASLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAER 113
Query: 87 ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
ALD +NF ++ + +RIM+S RDP+ R++G GNIFIKNLD+ ID+K+++DTFS FGNILS
Sbjct: 114 ALDTMNFEVIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILS 173
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER--ETVAI 204
CK+ATD G SKG+GFV FE + SAQ AI+K+NGML++DK+V+VG F + +R E
Sbjct: 174 CKVATDDEGNSKGYGFVHFETEHSAQTAIEKVNGMLLSDKKVYVGKFQPRAQRMKELGES 233
Query: 205 KTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAK 264
K+ NVFVKN E E L +F ++G ITSAVVM D GK K FGFV F + D A +
Sbjct: 234 GLKYTNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKPKGFGFVAFADQDAAGQ 293
Query: 265 AVEALNGKKFD--DREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDS 322
AVE LN + D + V +AQKKSER ELK ++E +E V ++QG+NLY+KN+ +
Sbjct: 294 AVEKLNDSILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRYQGVNLYVKNIEED 353
Query: 323 IDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPL 382
++D+ L++ FS FGTITS KVM D +G SKG GFV F PEEA+ A+ +MN KMI +KPL
Sbjct: 354 LNDDGLRDHFSSFGTITSAKVMVDENGRSKGFGFVCFEKPEEATAAVTDMNSKMIGAKPL 413
Query: 383 YVAVAQRKEERRARLQAQFSQ----MRPVAMGPSVPPRMPMYPPGPSG 426
YVA+AQRKE+RRA+L +Q+ Q +R VP +Y PG G
Sbjct: 414 YVALAQRKEDRRAQLASQYMQRLATLRMGQQASGVPAMTQLYQPGQQG 461
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 103/197 (52%), Gaps = 21/197 (10%)
Query: 21 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYAN 80
G SG ++ T+++V + ++ +L +FS+ G++ S V D + + G+G+V +A+
Sbjct: 231 GESGLKY--TNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTD-AQGKPKGFGFVAFAD 287
Query: 81 PADAARALDVLNFTPLNNKSIRIMY------SHRDPSIRKSGTG------------NIFI 122
A +A++ LN + L ++ S R +++ N+++
Sbjct: 288 QDAAGQAVEKLNDSILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRYQGVNLYV 347
Query: 123 KNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGML 182
KN+++ ++ L D FSSFG I S K+ D +G+SKGFGFV FE E A A+ +N +
Sbjct: 348 KNIEEDLNDDGLRDHFSSFGTITSAKVMVDENGRSKGFGFVCFEKPEEATAAVTDMNSKM 407
Query: 183 INDKQVFVGHFLRKQER 199
I K ++V RK++R
Sbjct: 408 IGAKPLYVALAQRKEDR 424
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
Query: 497 TALSTALANASPEQQRTLLGESLYPLVEQL--ERDAAAKVTGMLLEMDQTEVLHLLESPE 554
T S LA A+P++Q+ LLGE +Y L+E++ A K+TGM+LE+D E++ +L+ E
Sbjct: 603 TLTSHMLAQAAPQEQKQLLGERIYALIEKMFPNHKEAGKITGMMLEIDNAELIMMLQDAE 662
Query: 555 ALKAKVAEAMEVL 567
++KV EA VL
Sbjct: 663 LFRSKVEEAFGVL 675
>gi|452001105|gb|EMD93565.1| hypothetical protein COCHEDRAFT_1096208 [Cochliobolus
heterostrophus C5]
Length = 749
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 216/444 (48%), Positives = 293/444 (65%), Gaps = 55/444 (12%)
Query: 10 AQMSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRR 69
AQ P +A + NQ + SLYVG+LD +VT++ L++LFS +GQV S+RVCRD TRR
Sbjct: 29 AQAEAPTPTSAAPAHNQN-SASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRR 87
Query: 70 SLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSI 129
SLGY YVNY + D +AL+ LN+T + K RIM+S RDP++RK+G GN+FIKNLD +I
Sbjct: 88 SLGYAYVNYNSSEDGEKALEELNYTVIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDHAI 147
Query: 130 DHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVF 189
D+KALHDTF++FGNILSCK+A D G SKG+GFV +E E+A NAI +NGML+N+K+VF
Sbjct: 148 DNKALHDTFAAFGNILSCKVAQDELGNSKGYGFVHYETAEAANNAIKHVNGMLLNEKKVF 207
Query: 190 VGHFLRKQERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGK 247
VGH + K+ER + +K F N++VKN+D +DE+ +++F ++G ITSA + RD GK
Sbjct: 208 VGHHIPKKERMSKFEEMKANFTNIYVKNIDLDVSDEEFRELFEKHGDITSASIARDEQGK 267
Query: 248 SKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVD 307
S+ FGFVN+ + A+ AV+ALN F ++ YVG+AQKK ERE+EL+ Q+E A E
Sbjct: 268 SRGFGFVNYIKHEAASAAVDALNDTDFRGQKLYVGRAQKKHEREEELRKQYEAARLEKQS 327
Query: 308 KFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRD--PSGISKGSG---------- 355
K+QG+NLYIKNL D +DDEKL+++F+ FGTITS KVMRD P+ S+ G
Sbjct: 328 KYQGVNLYIKNLNDDVDDEKLRDMFTPFGTITSAKVMRDAMPAERSETPGDEKKEESKEE 387
Query: 356 ----------------------------------------FVAFSTPEEASRALAEMNGK 375
FV FS P+EA++A+ EMN K
Sbjct: 388 AEKTEESKEGADDKKDENKPGEKVTIKGEKKILGKSKGFGFVCFSNPDEATKAVTEMNQK 447
Query: 376 MIVSKPLYVAVAQRKEERRARLQA 399
MI KPLYVA+AQRK+ R+ +L+A
Sbjct: 448 MIEGKPLYVALAQRKDVRKNQLEA 471
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 153/293 (52%), Gaps = 21/293 (7%)
Query: 117 TGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAI 175
+ ++++ LD S+ L + FSS G + S ++ D + +S G+ +V + + E + A+
Sbjct: 47 SASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSSEDGEKAL 106
Query: 176 DKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTI 235
++LN +I K + +R+ KT NVF+KNLD + ++ L F +G I
Sbjct: 107 EELNYTVIKGKPCRI----MWSQRDPALRKTGQGNVFIKNLDHAIDNKALHDTFAAFGNI 162
Query: 236 TSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSERE---Q 292
S V +D G SK +GFV++E A+ A A++ +NG ++++ +VG K ER +
Sbjct: 163 LSCKVAQDELGNSKGYGFVHYETAEAANNAIKHVNGMLLNEKKVFVGHHIPKKERMSKFE 222
Query: 293 ELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISK 352
E+K F N+Y+KN+ + DE+ +ELF + G ITS + RD G S+
Sbjct: 223 EMKANF-------------TNIYVKNIDLDVSDEEFRELFEKHGDITSASIARDEQGKSR 269
Query: 353 GSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
G GFV + E AS A+ +N + LYV AQ+K ER L+ Q+ R
Sbjct: 270 GFGFVNYIKHEAASAAVDALNDTDFRGQKLYVGRAQKKHEREEELRKQYEAAR 322
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/341 (29%), Positives = 158/341 (46%), Gaps = 75/341 (21%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ +LD + + L+D F+ G +LS +V +D S GYG+V+Y A A+
Sbjct: 137 NVFIKNLDHAIDNKALHDTFAAFGNILSCKVAQD-ELGNSKGYGFVHYETAEAANNAIKH 195
Query: 91 LNFTPLNNKSIRIMYSHRDPSIR--------KSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
+N LN K ++ H P K+ NI++KN+D + + + F G
Sbjct: 196 VNGMLLNEK--KVFVGHHIPKKERMSKFEEMKANFTNIYVKNIDLDVSDEEFRELFEKHG 253
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET- 201
+I S IA D G+S+GFGFV + E+A A+D LN ++++VG +K ERE
Sbjct: 254 DITSASIARDEQGKSRGFGFVNYIKHEAASAAVDALNDTDFRGQKLYVGRAQKKHEREEE 313
Query: 202 ---------VAIKTKFN--NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD------- 243
+ ++K+ N+++KNL++ DE L+ +F +GTITSA VMRD
Sbjct: 314 LRKQYEAARLEKQSKYQGVNLYIKNLNDDVDDEKLRDMFTPFGTITSAKVMRDAMPAERS 373
Query: 244 ---GD------------------------------------------GKSKCFGFVNFEN 258
GD GKSK FGFV F N
Sbjct: 374 ETPGDEKKEESKEEAEKTEESKEGADDKKDENKPGEKVTIKGEKKILGKSKGFGFVCFSN 433
Query: 259 ADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFE 299
D+A KAV +N K + + YV AQ+K R+ +L+ +
Sbjct: 434 PDEATKAVTEMNQKMIEGKPLYVALAQRKDVRKNQLEATIQ 474
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 50/66 (75%)
Query: 501 TALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKV 560
+AL+ A+P QQ+ +LGE+LYP + +++ + A K+TGMLLEMD +E+++L AL+AKV
Sbjct: 658 SALSGAAPGQQKQMLGEALYPKIAEMQPELAGKITGMLLEMDNSELINLTSDEAALRAKV 717
Query: 561 AEAMEV 566
EAM V
Sbjct: 718 EEAMSV 723
>gi|780291|gb|AAA65224.1| polyadenylate-binding protein [Caenorhabditis elegans]
Length = 646
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 218/411 (53%), Positives = 288/411 (70%), Gaps = 7/411 (1%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
+G+ + SLYVGDL +V +S L++ FS G VLS+RVCRD +TR SLGY YVN+ PA
Sbjct: 25 TGSSYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPA 84
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
DA RA+D +NF L+ K +RIM+S RDP++R+SG GNIFIKNLDK ID+K+++DTFS FG
Sbjct: 85 DAERAMDTMNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFG 144
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHF--LRKQERE 200
NILSCK+A D G SKG+GFV FE +E+AQNAI K+NGML+ K+VFVG F ++ RE
Sbjct: 145 NILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFVGKFQPRAQRNRE 204
Query: 201 TVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
+F NV+VKN + E L+K+F ++G ITS VM +GKSK FGFV F N +
Sbjct: 205 LGETAKQFTNVYVKNFGDHYNKETLEKVFAKFGNITSCEVMTV-EGKSKGFGFVAFANPE 263
Query: 261 DAAKAVEALNGKKFD--DREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKN 318
+A AV+AL+ + D + +V +AQKKSER ELK + EQ E + K+QG+NLY+KN
Sbjct: 264 EAETAVQALHDSTIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKN 323
Query: 319 LGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIV 378
L +++DD+ LK+ F +G ITS KVM D +G SKG GFV F PEEA+ A+ EMN KM+
Sbjct: 324 LDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMNSKMVC 383
Query: 379 SKPLYVAVAQRKEERRARLQAQFSQ-MRPVAMGPSVPPRMPMYPPGPSGLG 428
SKPLYVA+ QRKE+RRA+L +Q+ Q + + M +VP MY P G G
Sbjct: 384 SKPLYVAIGQRKEDRRAQLASQYMQRVASMRMHGNVPG-AAMYNPTQPGPG 433
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 58/87 (66%), Gaps = 6/87 (6%)
Query: 490 VGQPMPITALSTALANASPEQQRTLLGESLYPLVEQL---ERDAAAKVTGMLLEMDQTEV 546
+G P+T S LA A+P++Q+ LLGE +Y L+E+L +DA K+TGM+LE+D +E+
Sbjct: 563 IGGQEPLT--SAMLAAAAPQEQKQLLGERIYALIEKLYPGHKDAG-KITGMMLEIDNSEL 619
Query: 547 LHLLESPEALKAKVAEAMEVLRSVAQQ 573
+ +L+ E ++KV EA VL S +Q
Sbjct: 620 IMMLQDSELFRSKVDEAASVLVSAQKQ 646
>gi|301624826|ref|XP_002941699.1| PREDICTED: polyadenylate-binding protein 4-like [Xenopus (Silurana)
tropicalis]
Length = 632
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 214/390 (54%), Positives = 280/390 (71%), Gaps = 10/390 (2%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
+ + + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ P
Sbjct: 3 TAASSYPMASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 82 ADAARA------LDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALH 135
AD +DV + +S RDPS+RKSG GN+FIKNLDKSID+KAL+
Sbjct: 63 ADGEYGNLLFDRMDVCFHVAGGKAFTLLWFSERDPSLRKSGVGNVFIKNLDKSIDNKALY 122
Query: 136 DTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLR 195
DTFS+FGNILSCK+ D +G SKG+ FV FE +++A AI+K+NGML+ND++VFVG F
Sbjct: 123 DTFSAFGNILSCKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKC 181
Query: 196 KQERET-VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGF 253
++ERE + K K F NV++KN E DE LK+ F +YG S VM D GKSK FGF
Sbjct: 182 RREREAELGAKAKEFTNVYIKNFGEDMDDERLKETFSKYGKTLSVKVMTDPSGKSKGFGF 241
Query: 254 VNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLN 313
V+FE +DA KAV+ +NGK + + +VG+AQKK ER+ ELK +FEQ +E + ++QG+N
Sbjct: 242 VSFERHEDANKAVDDMNGKDVNGKIMFVGRAQKKVERQAELKRRFEQLKQERISRYQGVN 301
Query: 314 LYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMN 373
LYIKNL D+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMN
Sbjct: 302 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE-EGRSKGFGFVCFSSPEEATKAVTEMN 360
Query: 374 GKMIVSKPLYVAVAQRKEERRARLQAQFSQ 403
G+++ SKPLYVA+AQRKEER+A L Q+ Q
Sbjct: 361 GRIVGSKPLYVALAQRKEERKAHLTNQYMQ 390
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 64/87 (73%), Gaps = 5/87 (5%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA+A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 542 PLTA--SMLASAPPQEQKQMLGERLFPLIQAMHPSLAGKITGMLLEIDNSELLHMLESPE 599
Query: 555 ALKAKVAEAMEVLRSVAQQQANNPADQ 581
+L++KV EA+ VL++ QA A Q
Sbjct: 600 SLRSKVEEAVAVLQA---HQAKKDAAQ 623
>gi|341900148|gb|EGT56083.1| hypothetical protein CAEBREN_04295 [Caenorhabditis brenneri]
Length = 649
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 225/412 (54%), Positives = 290/412 (70%), Gaps = 13/412 (3%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
+G+ + SLYVGDL +V +S L++ FS G VLS+RVCRD +TR SLGY YVN+ PA
Sbjct: 25 TGSSYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPA 84
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
DA RA+D +NF L+ K +RIM+S RDP++R+SG GNIFIKNLDK ID+K+++DTFS FG
Sbjct: 85 DAERAMDTMNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFG 144
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHF--LRKQERE 200
NILSCK+A D G SKG+GFV FE +E+AQNAI K+NGML+ K+VFVG F ++ RE
Sbjct: 145 NILSCKVAIDEEGSSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFVGKFQPRAQRNRE 204
Query: 201 TVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
K+ NV+VKN + E L+K+F +YGTITS VM DGKSK FGFV F +
Sbjct: 205 LGETAKKYTNVYVKNFGDHYNKESLEKLFAKYGTITSCDVMTS-DGKSKGFGFVAFAEPE 263
Query: 261 DAAKAVEALNGKKFD--DREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKN 318
+A AV+ALN + D + +V +AQKKSER ELK + EQ E + K+QG+NLY+KN
Sbjct: 264 EAEAAVQALNDSPVEGSDLKLHVCRAQKKSERHAELKKKHEQHKVERMQKYQGVNLYVKN 323
Query: 319 LGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIV 378
L +S+DDE LK+ F FG ITS KVM D +G SKG GFV F PEEA+ A+ EMN KM+
Sbjct: 324 LDESVDDEALKKQFESFGNITSAKVMTDENGRSKGFGFVCFEKPEEATTAVTEMNSKMVC 383
Query: 379 SKPLYVAVAQRKEERRARLQAQFSQ-MRPVAMGPSVP-----PRMPMYPPGP 424
SKPLYVA+AQRKE+RRA+L +Q+ Q + + M +VP P+ P PGP
Sbjct: 384 SKPLYVALAQRKEDRRAQLASQYMQRLASMRMHTNVPGGGLYPQQPQ--PGP 433
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 58/87 (66%), Gaps = 6/87 (6%)
Query: 490 VGQPMPITALSTALANASPEQQRTLLGESLYPLVEQL---ERDAAAKVTGMLLEMDQTEV 546
+G P+T S LA A+P++Q+ LLGE +Y L+E+L +DA K+TGM+LE+D +E+
Sbjct: 566 IGGQEPLT--SAMLAAAAPQEQKQLLGERIYALIEKLYPGHKDAG-KITGMMLEIDNSEL 622
Query: 547 LHLLESPEALKAKVAEAMEVLRSVAQQ 573
+ +L+ E ++KV EA VL S +Q
Sbjct: 623 IMMLQDSELFRSKVDEAASVLASSQKQ 649
>gi|268566587|ref|XP_002639761.1| C. briggsae CBR-PAB-1 protein [Caenorhabditis briggsae]
Length = 651
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 225/411 (54%), Positives = 290/411 (70%), Gaps = 7/411 (1%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
+G+ + SLYVGDL +V +S L++ FS G VLS+RVCRD +TR SLGY YVN+ PA
Sbjct: 25 TGSSYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPA 84
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
DA RA+D +NF L+ K +RIM+S RDP++R+SG GNIFIKNLDK ID+K+++DTFS FG
Sbjct: 85 DAERAMDTMNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFG 144
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRK--QERE 200
NILSCK+A D G SKG+GFV FE +E+AQNAI K+NGML+ K+VFVG F + + RE
Sbjct: 145 NILSCKVAIDEEGSSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFVGKFQPRAQRNRE 204
Query: 201 TVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
KF NV+VKN E + L+K+F +YGTITS VM +GKSK FGFV F +
Sbjct: 205 LGETAKKFTNVYVKNFGEHYNKDTLEKLFAKYGTITSCDVMTS-EGKSKGFGFVAFAEPE 263
Query: 261 DAAKAVEALNGKKFD--DREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKN 318
+A AV+ALN + D + +V +AQKKSER ELK + EQ E + K+QG+NLY+KN
Sbjct: 264 EAEAAVQALNDSPVEGSDLKLHVCRAQKKSERHAELKKKHEQHKVERMQKYQGVNLYVKN 323
Query: 319 LGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIV 378
L +S+DDE LK+ F FG ITS KVM D +G SKG GFV F PEEA+ A++EMN KM+
Sbjct: 324 LDESVDDEALKKQFESFGNITSAKVMTDENGRSKGFGFVCFEKPEEATTAVSEMNSKMVC 383
Query: 379 SKPLYVAVAQRKEERRARLQAQFSQ-MRPVAMGPSVPPRMPMYPPGPSGLG 428
SKPLYVA+AQRKE+RRA+L +Q+ Q + + M +VP MY P G G
Sbjct: 384 SKPLYVALAQRKEDRRAQLASQYMQRLASMRMHTNVPGG-GMYSPAQPGPG 433
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 58/87 (66%), Gaps = 6/87 (6%)
Query: 490 VGQPMPITALSTALANASPEQQRTLLGESLYPLVEQL---ERDAAAKVTGMLLEMDQTEV 546
+G P+T + L+ A+P++Q+ LLGE +Y L+E+L +DA K+TGM+LE+D +E+
Sbjct: 568 IGGQEPLT--TAMLSAAAPQEQKQLLGERIYALIEKLYPGHKDAG-KITGMMLEIDNSEL 624
Query: 547 LHLLESPEALKAKVAEAMEVLRSVAQQ 573
+ +L+ + ++KV EA VL S +Q
Sbjct: 625 IMMLQDSDLFRSKVDEAASVLASAQKQ 651
>gi|406867457|gb|EKD20495.1| 4 family polyadenylate binding protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 785
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 235/520 (45%), Positives = 322/520 (61%), Gaps = 73/520 (14%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVG+LD +VT++ L++LFSQ+G V S+RVCRD TRRSLGY YVNY D +AL
Sbjct: 61 SASLYVGELDSSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTIDGEKAL 120
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LN+T + + RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++FGNILSCK
Sbjct: 121 EELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILSCK 180
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKT 206
+A D +G SKG+GFV +E E+A AI +NGML+N+K+VFVGH + K++R++ +K
Sbjct: 181 VAQDETGASKGYGFVHYETDEAASQAIKHVNGMLLNEKKVFVGHHIPKKDRQSKFEEMKA 240
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDG-KSKCFGFVNFENADDAAKA 265
F N++VKN+ TDE+ +++F ++G +TSA + RD D KS+ FGFVNF N + AAKA
Sbjct: 241 NFTNIYVKNIPVEATDEEFRELFEKFGDVTSASLARDTDSNKSRGFGFVNFINHEHAAKA 300
Query: 266 VEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDD 325
V+ LNGK F ++ YVG+AQKK ERE+EL+ +E A E K+QG+NLY+KNL D +DD
Sbjct: 301 VDELNGKDFKGQDLYVGRAQKKHEREEELRKSYEAARIEKASKYQGVNLYVKNLDDDVDD 360
Query: 326 EKLKELFSEFGTITSCKVMRDPS------------------------------------- 348
+KL+ELF+ FG+ITS KVMRD
Sbjct: 361 DKLRELFTPFGSITSAKVMRDTPAETAEAEEKEKKDSEKNKENIKEGETAEAENTEDKPK 420
Query: 349 ------GISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFS 402
G SKG GFV F+ PEEAS+A+ +MN +M+ +KPLYVA+AQRK+ R+ +L+A
Sbjct: 421 SEKRTVGKSKGFGFVCFNNPEEASKAVTDMNQRMVNNKPLYVALAQRKDVRKNQLEASIQ 480
Query: 403 QMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPPQMPPRGHAYRYPLGRNMQD 462
+ M + +G+ QQF+ Q P P Q P + GR M
Sbjct: 481 ARNQIRMQQAA---------AAAGMPQQFM--QTPMFYPPGQQP----GFIPQAGRGMA- 524
Query: 463 FPFDMGAGSMLPVPVDMG-------AGIPRRDASVGQPMP 495
FP G +P+P G AG P + A G P P
Sbjct: 525 FPPQAG----MPIPGAQGGRPGQFPAGFPPQQAGRGGPGP 560
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 50/69 (72%)
Query: 498 ALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALK 557
AL+ L+ P QQ+ LLGE+L+P ++ L+ + A K+TGMLLEM+ E+++L+E AL+
Sbjct: 689 ALAQQLSAVPPAQQKQLLGEALFPKIQVLQPELAGKITGMLLEMENQELVNLIEDDSALR 748
Query: 558 AKVAEAMEV 566
+KV EA+ V
Sbjct: 749 SKVDEALTV 757
>gi|302920668|ref|XP_003053121.1| hypothetical protein NECHADRAFT_59146 [Nectria haematococca mpVI
77-13-4]
gi|256734061|gb|EEU47408.1| hypothetical protein NECHADRAFT_59146 [Nectria haematococca mpVI
77-13-4]
Length = 742
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 209/420 (49%), Positives = 291/420 (69%), Gaps = 49/420 (11%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVG+LD VT++ L++LFSQ+G V S+RVCRD TRRSLGY YVNY + AD +AL
Sbjct: 59 SASLYVGELDPAVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNSTADGEKAL 118
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LN+T + + RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++FGNILSCK
Sbjct: 119 EELNYTIIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCK 178
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKT 206
+A D +G SKG+GFV +E E+A AI +NGML+N+K+V+VGH + K++R++ +K
Sbjct: 179 VAQDENGNSKGYGFVHYETDEAAAQAIKHVNGMLLNEKKVYVGHHIPKKDRQSKFEEMKA 238
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
F NV+VKN+ T++D +++F +YG +TS+ + RD +GKS+ FGFVNF + AAKAV
Sbjct: 239 NFTNVYVKNISPEATEDDFRQLFEQYGDVTSSSLARDQEGKSRGFGFVNFTTHESAAKAV 298
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
+ LNGK F ++ YVG+AQKK ERE+EL+ +E A E +K+QG+NLYIKNL D +DD+
Sbjct: 299 DELNGKDFRGQDLYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLDDDVDDD 358
Query: 327 KLKELFSEFGTITSCKVMRDPS-------------------------------------- 348
KL+++FSEFG ITS KVMRD
Sbjct: 359 KLRQMFSEFGPITSAKVMRDTPVENEDEKPAEEKKEEQEDKDKENKPEETKEGEEGAEKK 418
Query: 349 ---------GISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQA 399
G SKG GFV FS P++A++A+AEMN +M+ +KPLYVA+AQRK+ R+++L+A
Sbjct: 419 AEKKSDKKLGKSKGFGFVCFSNPDDATKAVAEMNQRMVSNKPLYVALAQRKDVRKSQLEA 478
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/293 (30%), Positives = 158/293 (53%), Gaps = 21/293 (7%)
Query: 117 TGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAI 175
+ ++++ LD ++ L + FS G + S ++ D + +S G+ +V + + + A+
Sbjct: 59 SASLYVGELDPAVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNSTADGEKAL 118
Query: 176 DKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTI 235
++LN +I + + +R+ KT NVF+KNLD + ++ L F +G I
Sbjct: 119 EELNYTIIKGRPCRI----MWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNI 174
Query: 236 TSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSERE---Q 292
S V +D +G SK +GFV++E + AA+A++ +NG ++++ YVG K +R+ +
Sbjct: 175 LSCKVAQDENGNSKGYGFVHYETDEAAAQAIKHVNGMLLNEKKVYVGHHIPKKDRQSKFE 234
Query: 293 ELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISK 352
E+K F N+Y+KN+ ++ ++LF ++G +TS + RD G S+
Sbjct: 235 EMKANF-------------TNVYVKNISPEATEDDFRQLFEQYGDVTSSSLARDQEGKSR 281
Query: 353 GSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
G GFV F+T E A++A+ E+NGK + LYV AQ+K ER L+ + R
Sbjct: 282 GFGFVNFTTHESAAKAVDELNGKDFRGQDLYVGRAQKKHEREEELRKSYEAAR 334
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/336 (30%), Positives = 157/336 (46%), Gaps = 70/336 (20%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ +LD + + L+D F+ G +LS +V +D S GYG+V+Y AA+A+
Sbjct: 149 NVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQD-ENGNSKGYGFVHYETDEAAAQAIKH 207
Query: 91 LNFTPLNNKSIRIMYSHRDPSI--------RKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
+N LN K + + H P K+ N+++KN+ F +G
Sbjct: 208 VNGMLLNEKKVYV--GHHIPKKDRQSKFEEMKANFTNVYVKNISPEATEDDFRQLFEQYG 265
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET- 201
++ S +A D G+S+GFGFV F ESA A+D+LNG + ++VG +K ERE
Sbjct: 266 DVTSSSLARDQEGKSRGFGFVNFTTHESAAKAVDELNGKDFRGQDLYVGRAQKKHEREEE 325
Query: 202 -----------VAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD------- 243
A K + N+++KNLD+ D+ L+++F E+G ITSA VMRD
Sbjct: 326 LRKSYEAARLEKANKYQGVNLYIKNLDDDVDDDKLRQMFSEFGPITSAKVMRDTPVENED 385
Query: 244 -------------------------GD---------------GKSKCFGFVNFENADDAA 263
G+ GKSK FGFV F N DDA
Sbjct: 386 EKPAEEKKEEQEDKDKENKPEETKEGEEGAEKKAEKKSDKKLGKSKGFGFVCFSNPDDAT 445
Query: 264 KAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFE 299
KAV +N + ++ YV AQ+K R+ +L+ +
Sbjct: 446 KAVAEMNQRMVSNKPLYVALAQRKDVRKSQLEASIQ 481
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 68/126 (53%), Gaps = 6/126 (4%)
Query: 455 PLGRNMQDFPFD---MGAGSMLPVPVDMGAGIPRRDASVGQ--PMPITALSTALANASPE 509
P+G M FP + GAG P G G P+ A G P + L L A P
Sbjct: 617 PMGGAMPGFPPNNRQQGAGRGGPNAGRNGNG-PQAQAGRGAEGANPASVLQQQLQAAQPA 675
Query: 510 QQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRS 569
QQ+ +LGE ++P ++ + + A K+TGMLLEMD +E+++L+E +LKAKV EA+ V
Sbjct: 676 QQKQILGELIFPKIQAINSELAGKITGMLLEMDNSELVNLIEDDSSLKAKVDEALAVYDE 735
Query: 570 VAQQQA 575
+ Q
Sbjct: 736 YVKAQG 741
>gi|398404546|ref|XP_003853739.1| hypothetical protein MYCGRDRAFT_56466 [Zymoseptoria tritici IPO323]
gi|339473622|gb|EGP88715.1| hypothetical protein MYCGRDRAFT_56466 [Zymoseptoria tritici IPO323]
Length = 763
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 222/490 (45%), Positives = 299/490 (61%), Gaps = 74/490 (15%)
Query: 32 LYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVL 91
LYVG+LD +VT++ L++LFS +GQV S+RVCRD TRRSLGY YVNY D RAL+ L
Sbjct: 55 LYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNVAGDGERALEEL 114
Query: 92 NFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIAT 151
N+T + + RIM+S RDP +RK+G GN+FIKNLD +ID+KALHDTF++FGNILSCK+A
Sbjct: 115 NYTLIKGRPCRIMWSQRDPLLRKTGQGNVFIKNLDAAIDNKALHDTFAAFGNILSCKVAQ 174
Query: 152 DGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER--ETVAIKTKFN 209
D + SKG+GFV +E E+A AI +NGML+N+K+VFVGH + K++R + +K F
Sbjct: 175 DENANSKGYGFVHYETAEAANQAIKNVNGMLLNEKKVFVGHHIPKKDRMSKVEEMKANFT 234
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGD-GKSKCFGFVNFENADDAAKAVEA 268
N++VKN+D TTD + +++F +YG ITSA + D + GK++ FGFVN+ +DA KAVE
Sbjct: 235 NIYVKNIDSETTDNEFRELFEKYGDITSASLAHDNESGKNRGFGFVNYIRHEDAYKAVEE 294
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
LN F ++ YVG+AQKK ERE+EL+ Q+E A +E K+ G+NLY+KNL D IDD++L
Sbjct: 295 LNDSDFKGQKLYVGRAQKKHEREEELRKQYEAARQEKSAKYTGVNLYVKNLADEIDDDEL 354
Query: 329 KELFSEFGTITSCKVMRD--PS-------------------------------------- 348
+++F +G ITS KVMRD P+
Sbjct: 355 RKVFEPYGAITSAKVMRDTLPADGSETPAKKEGDAEEKEAEPEKDGEKKDDVDDLSKKLD 414
Query: 349 -----------GISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARL 397
G SKG GFV FS P+EA++A+ E+N KM+ KPLYVA+AQRKE R+++L
Sbjct: 415 TVTIQGEKKLLGKSKGFGFVCFSNPDEATKAVTELNQKMVHGKPLYVALAQRKEVRKSQL 474
Query: 398 QAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPPQ--MPPRGHAYRYP 455
+A V M QQ G PP + PQ M P G P
Sbjct: 475 EASIQARNQVRM------------------QQQATAGGIPPQFMQPQMFMGPNGQPMMMP 516
Query: 456 LGRNMQDFPF 465
G Q PF
Sbjct: 517 AGGRGQPMPF 526
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 58/107 (54%)
Query: 485 RRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQT 544
R AS PM AL AS QQ+ +LGE+LYP + + + A K+TGMLLEMD
Sbjct: 645 RGRASNRGPMGSGIDMAALNAASAPQQKQMLGEALYPKIHAQQPELAGKITGMLLEMDNE 704
Query: 545 EVLHLLESPEALKAKVAEAMEVLRSVAQQQANNPADQLASLSLNENL 591
E+L+L + +AL+ KV EA+ V + + ++ + ENL
Sbjct: 705 ELLNLTGNDQALREKVDEALTVYDEYLKNHSGPSGEEGGQANGAENL 751
>gi|429859146|gb|ELA33937.1| polyadenylate-binding protein [Colletotrichum gloeosporioides Nara
gc5]
Length = 688
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 251/645 (38%), Positives = 360/645 (55%), Gaps = 128/645 (19%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVG+LD +VT++ L++LFSQ+G V S+R AL
Sbjct: 59 SASLYVGELDPSVTEAMLFELFSQIGSVASIR--------------------------AL 92
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LN+T + + RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++FGNILSCK
Sbjct: 93 EELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCK 152
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKT 206
+A D +G SKG+GFV +E E+A AI +NGML+N+K+V+VGH + K++R++ +K
Sbjct: 153 VAQDENGNSKGYGFVHYETDEAAAQAIKHVNGMLLNEKKVYVGHHIPKKDRQSKFEEMKA 212
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
F NV+VKN+ TD++ + +F +G +TS+ + RD +GKS+ FGFVNF + AAKAV
Sbjct: 213 NFTNVYVKNIANEVTDDEFRDLFAAFGDVTSSSLARDQEGKSRGFGFVNFTTHEAAAKAV 272
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
E LN K F ++ YVG+AQKK ERE+EL+ +E A E +K+QG+NLYIKNL D +DDE
Sbjct: 273 EDLNNKDFRGQDLYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLDDEVDDE 332
Query: 327 KLKELFSEFGTITSCKVMRDP--------------------------------------- 347
KL+ LF++FG ITS KVMRD
Sbjct: 333 KLRTLFADFGPITSAKVMRDTPTDSKEDEEGSSEEKEKENKPEAEEKTEEKEGSEKKEKK 392
Query: 348 -----SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFS 402
G SKG GFV FS P++A++A+AEMN +M+ KPLYVA+AQRK+ R+++L+A
Sbjct: 393 SDKKLHGKSKGFGFVCFSNPDDATKAVAEMNQRMVHGKPLYVALAQRKDVRKSQLEASIQ 452
Query: 403 QMRPVAMGPSVPPRMPMYPPGPSGLGQQFLY------------GQAPPAI---------- 440
+A + P+ M PP GQQ ++ G PA+
Sbjct: 453 ARNQLAAAAAGLPQQYMQPPVFYAGGQQPVFPQGGRGMPFPQPGMPMPAVQGGRPGQFPG 512
Query: 441 ---------IPPQMPP-RGHAYRYPLG------------RNMQDFPFDMGAG-------- 470
+P QMPP G ++P G +Q GAG
Sbjct: 513 GYPQQGGRGVPQQMPPVYGMPGQFPPGAPYPNSGNPQFLAAIQQGGNQPGAGRGANPNGP 572
Query: 471 -SMLPVPVDMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERD 529
+ P P P +D + + LS+A N P QQ+ +LGE ++P ++ ++ +
Sbjct: 573 RNNAPFPQGGRGAAPAQDLNSSS-LIQQQLSSAAGN--PGQQKQILGEVIFPKIQAMQPE 629
Query: 530 AAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQ 574
A K+TGMLLEM+ E+++L+E ALKAKV EA+ V + Q
Sbjct: 630 LAGKITGMLLEMENAELVNLIEDESALKAKVDEALGVYEEYIKNQ 674
>gi|308486599|ref|XP_003105496.1| CRE-PAB-2 protein [Caenorhabditis remanei]
gi|308255462|gb|EFO99414.1| CRE-PAB-2 protein [Caenorhabditis remanei]
Length = 730
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 208/391 (53%), Positives = 278/391 (71%), Gaps = 4/391 (1%)
Query: 17 GVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYV 76
G A + SLY+GDL +VT+S L++ FS G VLS+RVCRD ++R SLGY YV
Sbjct: 42 GYPPNAPNATYSMASLYIGDLHPDVTESMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYV 101
Query: 77 NYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHD 136
N+ PADA RALD +NF ++ + +RIM+S RDP+ R++G GNIFIKNLD+ ID+K+++D
Sbjct: 102 NFQQPADAERALDTMNFEVIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSIYD 161
Query: 137 TFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRK 196
TFS FGNILSCK+ATD G SKG+GFV FE + SA AI+K+NGML++DK+VFVG F +
Sbjct: 162 TFSLFGNILSCKVATDEEGNSKGYGFVHFETEASALTAIEKVNGMLLSDKKVFVGKFQPR 221
Query: 197 QER--ETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFV 254
+R E K+ NVF+KN + ++ L ++F +YG ITSAVVM D GK K FGFV
Sbjct: 222 AQRMKELGESGLKYTNVFIKNFGDHLDEKKLTEMFSKYGEITSAVVMTDNSGKPKGFGFV 281
Query: 255 NFENADDAAKAVEALNGKKFD--DREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGL 312
F + D A KAV+ LN + D + V +AQKKSER ELK ++E +E V ++QG+
Sbjct: 282 AFVDPDAAIKAVDTLNESTLEGTDLKLSVCRAQKKSERTAELKRKYEALKQERVQRYQGV 341
Query: 313 NLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEM 372
NLY+KN+ + + D+ L+E F+ FG+ITS KVM D +G SKG GFV F PEEA+ A+ EM
Sbjct: 342 NLYVKNIEEEMTDDGLREHFANFGSITSAKVMVDENGRSKGFGFVCFEKPEEATAAVTEM 401
Query: 373 NGKMIVSKPLYVAVAQRKEERRARLQAQFSQ 403
N KMI +KPLYVA+AQRKE+RRA+L +Q+ Q
Sbjct: 402 NSKMIGAKPLYVALAQRKEDRRAQLASQYMQ 432
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 56/85 (65%), Gaps = 3/85 (3%)
Query: 497 TALSTALANASPEQQRTLLGESLYPLVEQL--ERDAAAKVTGMLLEMDQTEVLHLLESPE 554
T S LA A+P++Q+ LLGE +Y L+E++ A K+TGM+LE+D E++ +L+ +
Sbjct: 641 TLTSHMLAQAAPQEQKQLLGERIYALIEKMFPNHKEAGKITGMMLEIDNAELIMMLQDED 700
Query: 555 ALKAKVAEAMEVLRSVAQQQANNPA 579
++KV EA VL S AQ+ AN PA
Sbjct: 701 LFRSKVEEAFTVL-SNAQKNANGPA 724
>gi|147769692|emb|CAN65531.1| hypothetical protein VITISV_039630 [Vitis vinifera]
Length = 555
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 229/547 (41%), Positives = 341/547 (62%), Gaps = 40/547 (7%)
Query: 24 GNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPAD 83
G + +LYVGDLD V++ +L D+FS +G ++SVR+CRD + +SL Y YVN+ P+D
Sbjct: 23 GFELHKAALYVGDLDPEVSEVELVDVFSGMGPLVSVRLCRDSLSGKSLCYAYVNFFYPSD 82
Query: 84 AARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGN 143
A++AL LN T L K +RIM+SHRDP RK+G N+F+KNLD SI+ +L D F FGN
Sbjct: 83 ASKALACLNHTKLMGKPMRIMWSHRDPLPRKTGLANLFVKNLDPSINSASLQDIFCKFGN 142
Query: 144 ILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVA 203
ILSCK+A + +G+SK FGFVQF++ +SA A++ LN +++ K++FV F++K ER+ +
Sbjct: 143 ILSCKVAEE-NGKSKCFGFVQFDSDDSATAALNALNDTMLDGKKLFVSKFVKKCERKEAS 201
Query: 204 IKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAA 263
+TKF NV+VKNL E T++ ++ F E+G + + V+M+DG+GKS+ FGFVNFE+ D+A
Sbjct: 202 EETKFTNVYVKNLGEDLTEDIIRDKFSEFGKVGTVVIMKDGNGKSRGFGFVNFESPDEAK 261
Query: 264 KAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSI 323
KAVEALNG ++ +VG+AQKK+ER++ LK + ++ + + K + NLY+KNL S+
Sbjct: 262 KAVEALNGAMLGSKKLFVGRAQKKAERQELLKHE-KEMVNCNIGKEKASNLYVKNLDASV 320
Query: 324 DDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLY 383
DD+KL+E FS G ITS KVMR SG+SKG GFV FST EEA +AL +NG ++ + LY
Sbjct: 321 DDDKLQEHFSSCGQITSAKVMRHDSGLSKGFGFVCFSTSEEAQKALTTLNGTLLHGRSLY 380
Query: 384 VAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPP 443
+A+AQRKE+R+ R+PM G + Y Q
Sbjct: 381 IAMAQRKEDRQ---------------------RIPM-KQAQQGNTNNWGYQQNSRTFATS 418
Query: 444 QMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPIT--ALST 501
++P +G Y P + Q F + G+ SV + I A S
Sbjct: 419 KVPTQGLNYASP---SNQKLHFKKKGNN------KSGSEEASSKGSVSEKHFIRAPAQSN 469
Query: 502 ALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVA 561
N+ + ++G LYPLV L+ + A K+TGMLLEM+ ++++ LL+SP++L +V
Sbjct: 470 VWGNS-----KEIIGHHLYPLVHSLQPELAGKITGMLLEMNNSDIIKLLDSPDSLAVQVE 524
Query: 562 EAMEVLR 568
+A++ L+
Sbjct: 525 QAVQALK 531
>gi|380494250|emb|CCF33289.1| Poly(A) RNA binding protein [Colletotrichum higginsianum]
Length = 677
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 214/474 (45%), Positives = 304/474 (64%), Gaps = 58/474 (12%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVG+LD +VT++ L++LFSQ+G V S+RVCRD TRRSLGY YVNY +D +AL
Sbjct: 63 SASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTSDGEKAL 122
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LN+T + + RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++FGNILSCK
Sbjct: 123 EELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCK 182
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKT 206
+A D +G SKG+GFV +E E+A AI +NGML+N+K+V+VGH + K++R++ +K
Sbjct: 183 VAQDENGNSKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKDRQSKFEEMKA 242
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
F N+++KN+ TD++ + +F +G +TS+ + RD +GKS+ FGFVNF + AAKAV
Sbjct: 243 NFTNIYIKNISGEVTDDEFRDLFTPFGDVTSSSLARDQEGKSRGFGFVNFTTHEAAAKAV 302
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
+ LNGK F ++ YVG+AQKK ERE+EL+ +E A E +K+QG+NLYIKNL D +DDE
Sbjct: 303 DDLNGKDFRGQDLYVGRAQKKHEREEELRKSYEAARMEKANKYQGVNLYIKNLDDDVDDE 362
Query: 327 KLKELFSEFGTITSCKVMRDPSGIS----------------------------------- 351
KL++LF++FG ITS KVMRD + S
Sbjct: 363 KLRQLFADFGPITSAKVMRDNATDSGNEDEGSSEEKETEAKKDEEEEEKPEEAKTDDKED 422
Query: 352 ---------------KGSGF--VAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERR 394
K GF V FS P++A++A+AEMN +M+ KPLYVA+AQRK+ R+
Sbjct: 423 ADKKSDKKSDKKLHGKSKGFGFVCFSNPDDATKAVAEMNQRMVNGKPLYVALAQRKDVRK 482
Query: 395 ARLQAQFSQMRPVAMGPSVP----PRMPMYPPGPSGLGQQFLYGQAPPAIIPPQ 444
++L+A + M + P+ M PP GQQ ++ Q + PQ
Sbjct: 483 SQLEASIQARNQLRMQQAAAAAGMPQQYMQPPVFYAAGQQPVFPQGGRGMAFPQ 536
>gi|449440159|ref|XP_004137852.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
[Cucumis sativus]
gi|449521207|ref|XP_004167621.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
[Cucumis sativus]
Length = 640
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 197/383 (51%), Positives = 273/383 (71%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL +VTD QL+D FS + SVR+CRD ST RSL YGYVN+ +P DA A++V
Sbjct: 15 SLYVGDLHPDVTDGQLFDAFSGFKSLASVRICRDSSTGRSLSYGYVNFISPQDATNAIEV 74
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+N + LN ++IR+M+S RD RKSG GN+F+KNL SI+ L + F FGN+LS K+A
Sbjct: 75 MNHSMLNGRAIRVMWSRRDADARKSGIGNVFVKNLSDSINSLGLQELFKKFGNVLSSKVA 134
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNN 210
T G+SKG+GFVQFE++ESA AI+ LNG + DKQ++VG F+RK +R K+ N
Sbjct: 135 TSDDGKSKGYGFVQFESEESANAAIESLNGFTVGDKQIYVGKFVRKSDRVLANPDIKYTN 194
Query: 211 VFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALN 270
++VKNLD +E L++ F E+G I+S ++ RD +G S+ FGF+NFEN+DDA +A+E LN
Sbjct: 195 LYVKNLDPEIGEEHLQEKFSEFGKISSMIISRDENGVSRGFGFINFENSDDAKRALETLN 254
Query: 271 GKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKE 330
G + + Y+ +AQKK+ERE+ L+ +E+ KE V K++G N+Y+KN+ D + DE+L+E
Sbjct: 255 GSQLGSKVIYIARAQKKTEREEVLRRHYEEKCKEQVLKYKGSNVYVKNIDDDVTDEELRE 314
Query: 331 LFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRK 390
FS+FGTITS K+MRD GI+KG GFV FS P+EA RA+ + G M KPLY+A+AQRK
Sbjct: 315 RFSQFGTITSSKLMRDDKGINKGFGFVCFSNPDEAKRAVNTLQGCMFHGKPLYLAIAQRK 374
Query: 391 EERRARLQAQFSQMRPVAMGPSV 413
E+R+ +L+ QF+Q GPS
Sbjct: 375 EDRQMQLKLQFAQRLAGIPGPST 397
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 108/195 (55%), Gaps = 18/195 (9%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
T+LYV +LD + + L + FS+ G++ S+ + RD S G+G++N+ N DA RAL+
Sbjct: 193 TNLYVKNLDPEIGEEHLQEKFSEFGKISSMIISRD-ENGVSRGFGFINFENSDDAKRALE 251
Query: 90 VLNFTPLNNKSIRIMY----SHRDPSIR------------KSGTGNIFIKNLDKSIDHKA 133
LN + L +K I I + R+ +R K N+++KN+D + +
Sbjct: 252 TLNGSQLGSKVIYIARAQKKTEREEVLRRHYEEKCKEQVLKYKGSNVYVKNIDDDVTDEE 311
Query: 134 LHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHF 193
L + FS FG I S K+ D G +KGFGFV F N + A+ A++ L G + + K +++
Sbjct: 312 LRERFSQFGTITSSKLMRDDKGINKGFGFVCFSNPDEAKRAVNTLQGCMFHGKPLYLAIA 371
Query: 194 LRKQERETVAIKTKF 208
RK++R+ + +K +F
Sbjct: 372 QRKEDRQ-MQLKLQF 385
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/70 (61%), Positives = 59/70 (84%)
Query: 499 LSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKA 558
LS+ LA++ P+QQ+ +LGE LYPLV++ + D AAK+TGMLLEMD +E+L LLESPE+L A
Sbjct: 549 LSSMLASSPPDQQKQILGEHLYPLVQKRKPDLAAKITGMLLEMDNSELLLLLESPESLAA 608
Query: 559 KVAEAMEVLR 568
KV EA++VL+
Sbjct: 609 KVEEAVQVLK 618
>gi|358394883|gb|EHK44276.1| hypothetical protein TRIATDRAFT_79372 [Trichoderma atroviride IMI
206040]
Length = 746
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 213/433 (49%), Positives = 293/433 (67%), Gaps = 49/433 (11%)
Query: 13 SGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLG 72
S P AA N + SLYVG+LD +VT++ L++LFSQ+G V S+RVCRD TRRSLG
Sbjct: 45 SAPTPTAAPHPQN---SASLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLG 101
Query: 73 YGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHK 132
Y YVNY + D +AL+ LN+TP+ + RIM+S RDP++RK+G GN+FIKNLD +ID+K
Sbjct: 102 YAYVNYNSTPDGEKALEELNYTPIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNK 161
Query: 133 ALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGH 192
ALHDTF++FGNILSCK+A D +G SKG+GFV +E E+A AI +NGML+N+K+V+VG+
Sbjct: 162 ALHDTFAAFGNILSCKVAQDETGASKGYGFVHYETDEAAAQAIKHVNGMLLNEKKVYVGY 221
Query: 193 FLRKQERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKC 250
+ K++R++ +K F NV+VKN+ TD + +++F +YG +TS+ + RD +GKS+
Sbjct: 222 HIPKKDRQSKFEEMKANFTNVYVKNISPDVTDNEFRELFEKYGDVTSSSLARDQEGKSRG 281
Query: 251 FGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQ 310
FGFVNF + A KAV+ LNG F +E YVG+AQKK ERE+EL+ +E A E K+Q
Sbjct: 282 FGFVNFTTHEAAYKAVDELNGNDFRGQELYVGRAQKKHEREEELRKSYEAARLEKASKYQ 341
Query: 311 GLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP----------------------- 347
G+NLYIKNL D +DD+KL+++FSEFG ITS KVMRD
Sbjct: 342 GVNLYIKNLDDDVDDDKLRQMFSEFGPITSAKVMRDSLQEGEEEVKDQEKDKENQKEAEN 401
Query: 348 ---------------------SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 386
G SKG GFV FS P++A++A+AEMN +MI +KPLYVA+
Sbjct: 402 EAEAESAENAEKKAEKKGDKKLGKSKGFGFVCFSNPDDATKAVAEMNQRMINNKPLYVAL 461
Query: 387 AQRKEERRARLQA 399
AQRK+ R+++L+A
Sbjct: 462 AQRKDVRKSQLEA 474
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 155/293 (52%), Gaps = 21/293 (7%)
Query: 117 TGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAI 175
+ ++++ LD S+ L + FS G + S ++ D + +S G+ +V + + + A+
Sbjct: 58 SASLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNSTPDGEKAL 117
Query: 176 DKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTI 235
++LN I + + +R+ KT NVF+KNLD + ++ L F +G I
Sbjct: 118 EELNYTPIKGRPCRI----MWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNI 173
Query: 236 TSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSERE---Q 292
S V +D G SK +GFV++E + AA+A++ +NG ++++ YVG K +R+ +
Sbjct: 174 LSCKVAQDETGASKGYGFVHYETDEAAAQAIKHVNGMLLNEKKVYVGYHIPKKDRQSKFE 233
Query: 293 ELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISK 352
E+K F N+Y+KN+ + D + +ELF ++G +TS + RD G S+
Sbjct: 234 EMKANF-------------TNVYVKNISPDVTDNEFRELFEKYGDVTSSSLARDQEGKSR 280
Query: 353 GSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
G GFV F+T E A +A+ E+NG + LYV AQ+K ER L+ + R
Sbjct: 281 GFGFVNFTTHEAAYKAVDELNGNDFRGQELYVGRAQKKHEREEELRKSYEAAR 333
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 101/331 (30%), Positives = 164/331 (49%), Gaps = 63/331 (19%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ +LD + + L+D F+ G +LS +V +D T S GYG+V+Y AA+A+
Sbjct: 148 NVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQD-ETGASKGYGFVHYETDEAAAQAIKH 206
Query: 91 LNFTPLNNKSIRIMYS--HRDPSIR----KSGTGNIFIKNLDKSIDHKALHDTFSSFGNI 144
+N LN K + + Y +D + K+ N+++KN+ + + F +G++
Sbjct: 207 VNGMLLNEKKVYVGYHIPKKDRQSKFEEMKANFTNVYVKNISPDVTDNEFRELFEKYGDV 266
Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET--- 201
S +A D G+S+GFGFV F E+A A+D+LNG ++++VG +K ERE
Sbjct: 267 TSSSLARDQEGKSRGFGFVNFTTHEAAYKAVDELNGNDFRGQELYVGRAQKKHEREEELR 326
Query: 202 ---------VAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD----GD--- 245
A K + N+++KNLD+ D+ L+++F E+G ITSA VMRD G+
Sbjct: 327 KSYEAARLEKASKYQGVNLYIKNLDDDVDDDKLRQMFSEFGPITSAKVMRDSLQEGEEEV 386
Query: 246 -------------------------------------GKSKCFGFVNFENADDAAKAVEA 268
GKSK FGFV F N DDA KAV
Sbjct: 387 KDQEKDKENQKEAENEAEAESAENAEKKAEKKGDKKLGKSKGFGFVCFSNPDDATKAVAE 446
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFE 299
+N + +++ YV AQ+K R+ +L+ +
Sbjct: 447 MNQRMINNKPLYVALAQRKDVRKSQLEASIQ 477
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 43/65 (66%)
Query: 514 LLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQ 573
+LGE ++P ++ + + A K+TGMLLEMD TE+++L+E ALKAKV EA+ V +
Sbjct: 673 ILGELIFPKIQAINSELAGKITGMLLEMDNTELVNLIEDEAALKAKVDEALAVYDEYVKS 732
Query: 574 QANNP 578
Q P
Sbjct: 733 QGTGP 737
>gi|346323639|gb|EGX93237.1| polyadenylate-binding protein [Cordyceps militaris CM01]
Length = 736
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 209/433 (48%), Positives = 286/433 (66%), Gaps = 56/433 (12%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVG+LD +VT++ L++LFSQ+G V S+RVCRD TRRSLGY YVNY + D +AL
Sbjct: 54 SASLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNSTPDGEKAL 113
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LN+T + + RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++FGNILSCK
Sbjct: 114 EELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCK 173
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKT 206
+A D +G SKG+GFV +E E+AQ AI +NGML+N+K+V+VGH + K++R++ +K
Sbjct: 174 VAQDETGSSKGYGFVHYETDEAAQQAIKHVNGMLLNEKKVYVGHHIPKKDRQSKFEEMKA 233
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
F NV++KN+ TD+ + +F +G +TS+ + RD DGKS+ FGFVNF + A+ AV
Sbjct: 234 NFTNVYIKNIAPDVTDDQFRVLFEAHGDVTSSSIARDPDGKSRGFGFVNFTTHEAASAAV 293
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
E LN K F +E YVG+AQKK ERE+EL+ +E A E K+QG+NLYIKNL D +DDE
Sbjct: 294 EELNNKDFHGQELYVGRAQKKHEREEELRKSYEAARIEKASKYQGVNLYIKNLDDDVDDE 353
Query: 327 KLKELFSEFGTITSCKVMRD-PSGISKGSG------------------------------ 355
KL+ +F+EFG ITS KVMRD PS G
Sbjct: 354 KLRTMFTEFGPITSAKVMRDSPSDDEDEEGKEAEAEDKDKENKKADAEAEAAEAAEEENS 413
Query: 356 --------------------FVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRA 395
FV FS P++A++A+AEMN +MI KPLYVA+AQRK+ R++
Sbjct: 414 DKEKKERKGSKKLGKSKGFGFVCFSNPDDATKAVAEMNQRMINGKPLYVALAQRKDVRKS 473
Query: 396 RLQAQF---SQMR 405
+L+A +QMR
Sbjct: 474 QLEASIQARNQMR 486
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 53/78 (67%)
Query: 497 TALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEAL 556
+AL T ++ A P QQ+ +LGE ++P ++ + + A K+TGMLLEMD +E+++L+E AL
Sbjct: 647 SALQTQISGAPPAQQKQMLGEMIFPKIQAINGELAGKITGMLLEMDNSELINLIEDDAAL 706
Query: 557 KAKVAEAMEVLRSVAQQQ 574
K+KV EA+ V + Q
Sbjct: 707 KSKVDEALAVYDEYVKTQ 724
>gi|194381714|dbj|BAG64226.1| unnamed protein product [Homo sapiens]
Length = 591
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 204/364 (56%), Positives = 266/364 (73%), Gaps = 4/364 (1%)
Query: 65 LSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKN 124
+ TRRSLGY YVN+ PADA RALD +NF + K +RIM+S RDP +RKSG GNIFIKN
Sbjct: 1 MITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPPLRKSGVGNIFIKN 60
Query: 125 LDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLIN 184
LDKSID+KAL+DTFS+FGNILSCK+ D +G SKG+GFV FE +E+A+ AI+K+NGML+N
Sbjct: 61 LDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLN 119
Query: 185 DKQVFVGHFLRKQERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMR 242
D++V VG F ++ERE A +F NV++KN E DE LK +FG++G S VM
Sbjct: 120 DRKVSVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMT 179
Query: 243 DGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAM 302
D GKSK FGFV+FE +DA KAV+ +NGK+ + ++ YVG+AQKK ER+ ELK +FEQ
Sbjct: 180 DESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 239
Query: 303 KETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTP 362
++ + ++QG+NLY+KNL D IDDE+L++ FS FGTITS KVM + G SKG GFV FS+P
Sbjct: 240 QDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSP 298
Query: 363 EEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPP 422
EEA++A+ MNG+++ +KPLYVA+AQRKEER+A L Q+ Q P P P
Sbjct: 299 EEATKAVTGMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPA 358
Query: 423 GPSG 426
PSG
Sbjct: 359 PPSG 362
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 115/291 (39%), Positives = 170/291 (58%), Gaps = 23/291 (7%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ +LD ++ + LYD FS G +LS +V D + S GYG+V++ A RA++
Sbjct: 55 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEK 112
Query: 91 LNFTPLNNKSIRI----MYSHRDPSI--RKSGTGNIFIKNLDKSIDHKALHDTFSSFGNI 144
+N LN++ + + R+ + R N++IKN + +D + L D F FG
Sbjct: 113 MNGMLLNDRKVSVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPA 172
Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAI 204
LS K+ TD SG+SKGFGFV FE E AQ A+D++NG +N KQ++VG +K ER+T +
Sbjct: 173 LSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQT-EL 231
Query: 205 KTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCF 251
K KF N++VKNLD+ DE L+K F +GTITSA VM +G G+SK F
Sbjct: 232 KRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG-GRSKGF 290
Query: 252 GFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAM 302
GFV F + ++A KAV +NG+ + YV AQ+K ER+ L Q+ Q M
Sbjct: 291 GFVCFSSPEEATKAVTGMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRM 341
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 106/197 (53%), Gaps = 22/197 (11%)
Query: 21 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYAN 80
GA +F T++Y+ + ++ D +L DLF + G LSV+V D S +S G+G+V++
Sbjct: 139 GARAKEF--TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESG-KSKGFGFVSFER 195
Query: 81 PADAARALDVLNFTPLNNKSIRIMYSHR-----------------DPSIRKSGTGNIFIK 123
DA +A+D +N LN K I + + + D R G N+++K
Sbjct: 196 HEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGV-NLYVK 254
Query: 124 NLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLI 183
NLD ID + L FS FG I S K+ +G G+SKGFGFV F + E A A+ +NG ++
Sbjct: 255 NLDDGIDDERLRKEFSPFGTITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTGMNGRIV 313
Query: 184 NDKQVFVGHFLRKQERE 200
K ++V RK+ER+
Sbjct: 314 ATKPLYVALAQRKEERQ 330
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA+A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 499 PLTA--SMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPE 556
Query: 555 ALKAKVAEAMEVLRSVAQQQA 575
+L++KV EA+ VL++ ++A
Sbjct: 557 SLRSKVDEAVAVLQAHQAKEA 577
>gi|156086682|ref|XP_001610750.1| polyadenylate binding protein [Babesia bovis T2Bo]
gi|154798003|gb|EDO07182.1| polyadenylate binding protein, putative [Babesia bovis]
Length = 585
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 241/565 (42%), Positives = 344/565 (60%), Gaps = 32/565 (5%)
Query: 27 FLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAAR 86
F + SLYVG+L VT++ LY++F+ +G V S+RVCRD TR+SLGY YVNY N DA
Sbjct: 33 FNSASLYVGNLLPEVTEAMLYEVFNGIGPVASIRVCRDSLTRKSLGYAYVNYYNFQDAEA 92
Query: 87 ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
AL+ LN+ + + RIM+S RDPS+RKSGTGNIF+KNLDK+ID KAL+DTFS FG ILS
Sbjct: 93 ALECLNYIEIKGQPARIMWSERDPSLRKSGTGNIFVKNLDKAIDTKALYDTFSHFGTILS 152
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKT 206
CK+A D G SKG+GFV + +ESA+ AI+K+NGMLI + QV V FLR+ ER T +
Sbjct: 153 CKVAIDSLGNSKGYGFVHYTTEESAKEAIEKVNGMLIGNSQVSVAPFLRRNER-TSTVGD 211
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
F N++V+N ++ T++DL + F +YG ITS ++ D G+ F FVNF + + A A+
Sbjct: 212 VFTNLYVRNFPDTWTEDDLHQTFSKYGEITSLLLKSDDKGRR--FAFVNFVDTNMAKAAM 269
Query: 267 EALNGKKFDDRE--WYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSID 324
E NG KF+ E V + K+ R LK Q++ ++ +KF G+NLYIKNL D D
Sbjct: 270 EGENGVKFESVEEPMMVCQHMDKARRYAMLKAQYDSNAQDQRNKFMGVNLYIKNLDDDFD 329
Query: 325 DEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYV 384
D+ L++LF ++GT+TS KVMRD +G+S+G GFV FS P+EA++A+A M+ K++ +KPLYV
Sbjct: 330 DDGLRDLFKQYGTVTSSKVMRDHNGVSRGFGFVCFSRPDEATKAVAGMHLKLVKNKPLYV 389
Query: 385 AVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPG--PSG-LGQQFLYGQAPPAII 441
+A+++E+R +R+Q + Q + G P +P+YPP P G Q + PA
Sbjct: 390 GLAEKREQRASRMQQRNRQNDMMQYG-DRPGYVPLYPPEMVPQGYFNHQVGFRPTVPA-Q 447
Query: 442 PPQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIP---------------RR 486
P + PRG P+ P G G+ P G P R
Sbjct: 448 PMGVGPRGMRMVAPM-------PMMHGRGTASPHAAAQGRRTPVKQVPLSGFKFTAQARN 500
Query: 487 DASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEV 546
+ P A+ T + ++GE L+P+V + + A K+TGM+LEMD E+
Sbjct: 501 RTELPNGAPAAAVPTQRPIDGAAMHKQMIGERLFPIVARENPELAGKITGMMLEMDNQEL 560
Query: 547 LHLLESPEALKAKVAEAMEVLRSVA 571
+ LLE+ + LK K+ EAM VL+ +
Sbjct: 561 MALLENEQQLKDKIQEAMRVLKQAS 585
>gi|225442420|ref|XP_002277538.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
nuclear-like [Vitis vinifera]
Length = 630
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 239/596 (40%), Positives = 358/596 (60%), Gaps = 63/596 (10%)
Query: 24 GNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPAD 83
G + +LYVGDLD V++ +L D+FS +G ++SVR+CRD + +SL Y YVN+ +P+D
Sbjct: 23 GFELHKAALYVGDLDPEVSEVELVDVFSGMGPLVSVRLCRDSLSGKSLCYAYVNFFHPSD 82
Query: 84 AARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGN 143
A++AL LN T L K +RIM+SHRDP RK+G N+F+KNLD SI+ +L D F FGN
Sbjct: 83 ASKALACLNHTKLMGKPMRIMWSHRDPLPRKTGLANLFVKNLDPSINSASLQDIFCKFGN 142
Query: 144 ILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVA 203
ILSCK+A + +G+SK FGFVQF++ +SA A++ LN +++ K++FV F++K ER+ +
Sbjct: 143 ILSCKVAEE-NGKSKCFGFVQFDSDDSATAALNALNDTMLDGKKLFVSKFVKKCERKEAS 201
Query: 204 IKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAA 263
+TKF NV+VKNL E T++ ++ F E+G + + V+M+DG+GKS+ FGFVNFE+ D+A
Sbjct: 202 EETKFTNVYVKNLGEDLTEDIIRDKFSEFGKVGTVVIMKDGNGKSRGFGFVNFESPDEAK 261
Query: 264 KAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSI 323
KAVEALNG ++ +VG+AQKK+ER++ LK + ++ + + K + NLY+KNL S+
Sbjct: 262 KAVEALNGAMLGSKKLFVGRAQKKAERQELLKHE-KEMVNCNIGKEKASNLYVKNLDASV 320
Query: 324 DDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLY 383
DD+KL+E FS G ITS KVMR SG+SKG GFV FST EEA +AL +NG ++ + LY
Sbjct: 321 DDDKLQEHFSSCGQITSAKVMRHDSGLSKGFGFVCFSTSEEAQKALTTLNGTLLHGRSLY 380
Query: 384 VAVAQRKEERRARLQAQFSQMRPVAMGPSV------PPRMPMYP---PGPSG-------- 426
+A+AQRKE+R+ L+ +SQ GP P P P P+
Sbjct: 381 IAMAQRKEDRQRVLRDYYSQYLLQYYGPHFLSSGSSSPDYSFVPFPHPNPTPQINSPQPI 440
Query: 427 LGQQF-------------LYGQAPPAIIPPQMPPRGHAYRYPLGRNMQDFPFDMGAGSML 473
+ QQF Y Q IP + +G+ + +N + F A S +
Sbjct: 441 ICQQFGRNLGVMRPFAPQNYQQNFSTFIPMKQAQQGNTNNWGYQQNSRTF-----ATSKV 495
Query: 474 PV-------PVDMGAGIPRR------------DASVGQPMPIT--ALSTALANASPEQQR 512
P P + ++ SV + I A S N+ +
Sbjct: 496 PTQGLNYASPSNQKLHFKKKGNNKSGSEEASSKGSVSEKHFIRAPAQSNVWGNS-----K 550
Query: 513 TLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLR 568
++G LYPLV L+ + A K+TGMLLEM+ ++++ LL+SP++L +V +A++ L+
Sbjct: 551 EIIGHHLYPLVHSLQPELAGKITGMLLEMNNSDIIKLLDSPDSLAVQVEQAVQALK 606
>gi|332208761|ref|XP_003253477.1| PREDICTED: polyadenylate-binding protein 1-like [Nomascus
leucogenys]
Length = 590
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 250/615 (40%), Positives = 342/615 (55%), Gaps = 90/615 (14%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
ASG+ + SLYVGDL +VT++ LY+ FS G +LS+RVCRD++TRRSLGY Y+N+ P
Sbjct: 3 ASGSGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF L + IRIM+S RDP +RKSG GNIFIKNL+ SID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+A D G S+GFGFV FE E+AQ AI+ +NGML+ND++VFVGHF ++ERE
Sbjct: 123 GNILSCKVACDEHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRREREA 181
Query: 202 V--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
A +F N++VKNL ++ L+ +F ++G + S VMRD G S+CFGFVNFE
Sbjct: 182 ELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
++A KAV +NGK+ R Y G+AQK+ ER+ ELK +FEQ ++ + ++Q
Sbjct: 242 EEAQKAVVHMNGKEVSGRLLYAGRAQKRMERQNELKRRFEQMKQDRLRRYQL-------- 293
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
+ + P G + + S P A+ A+ EMNG+++ +
Sbjct: 294 -----------------SRGPAQCWAWPVGRREAAQPQEPSFPTPAALAVTEMNGRIVGT 336
Query: 380 KPLYVAVAQRKEERRARLQAQ----FSQMRPVA--------------------------- 408
KPLYVA+AQRKEER+A L Q S MR ++
Sbjct: 337 KPLYVALAQRKEERKAILTNQYMQRLSTMRTLSNPLLGSFQQPSSYFLPAVPQPPAQAAY 396
Query: 409 --MGPSVP----PRMPMYPPGPSGLGQQFLYGQAPPAIIP-----------PQMPPRGHA 451
GP P PR PP PS + P P+ P H
Sbjct: 397 YGCGPVTPTQPAPRWTSQPPRPSCASMVRPPVVPRRPLAPISSVRQASTQVPRTVP--HT 454
Query: 452 YRYPLGRNMQDFPFDMGAGS----MLPVPVDMGAGIPRR--DASVGQP--MPITALSTAL 503
R P +G + +LP A R + +V P P+TA + L
Sbjct: 455 QRVANIGTQTTGPGGVGCCTPGRPLLPYKCSPAAHSTYRVQEPAVHIPGQEPLTA--SML 512
Query: 504 ANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEA 563
A A +Q+ ++GE LYPL+ + A K+TGMLLE+D +E+L +LESPE+L AK+ EA
Sbjct: 513 AAAPLHEQKQMIGERLYPLIHDVHTQLAGKITGMLLEIDNSELLLMLESPESLHAKIDEA 572
Query: 564 MEVLRSVAQQQANNP 578
+ VL+ A Q P
Sbjct: 573 VAVLQ--AHQAVEQP 585
>gi|443926079|gb|ELU44821.1| polyadenylate-binding protein [Rhizoctonia solani AG-1 IA]
Length = 593
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 223/459 (48%), Positives = 306/459 (66%), Gaps = 45/459 (9%)
Query: 15 PNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYG 74
P GA+ Q T SLYVG+LD V+++ L+++F+ +G V S+RVCRD TRRSLGY
Sbjct: 161 PPAAVGGAAVPQ--TASLYVGELDHTVSEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYA 218
Query: 75 YVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKAL 134
YVNY N AD R RDP++RK+G GNIFIKNLD++ID+KAL
Sbjct: 219 YVNYLNAADGER---------------------RDPALRKTGQGNIFIKNLDEAIDNKAL 257
Query: 135 HDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFL 194
HDTF++FGN+LSCK+ATD +G+S+G+G+V +E ESA+ AI +N ML+NDKQVFVGH +
Sbjct: 258 HDTFAAFGNVLSCKVATDETGKSRGYGYVHYETAESAEAAIKAVNRMLLNDKQVFVGHHI 317
Query: 195 RKQERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFG 252
++ER++ + +F N++VKNLD T+ + + +F E+G ITSAV+ D +GKS+ FG
Sbjct: 318 SRKERQSQIDEARAQFTNIYVKNLDTDITEAEFRVMFEEFGNITSAVLQTDNEGKSRGFG 377
Query: 253 FVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGL 312
FVN+EN ++A +AV ++ K+ + +VG+AQKKSER+ EL E A +E +K+ G+
Sbjct: 378 FVNYENHEEAERAVNEMHEKEIKGKVLFVGRAQKKSERQSELARSHEAAKQERQNKYAGV 437
Query: 313 NLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEM 372
NLY+KNL D +DD+KL+ F FGTITSCKVMR+ ISKG GFV FSTP+EA++A+ EM
Sbjct: 438 NLYVKNLDDDVDDDKLRAEFEAFGTITSCKVMRNERDISKGFGFVCFSTPDEATKAVTEM 497
Query: 373 NGKMIVSKPLYVAVAQRKEERRARLQAQF---SQMR----PVAMGPSVPPRMPMYPPGPS 425
N KMI +KPLYV++AQR++ RR +L+ Q +QMR P+ MGP M P
Sbjct: 498 NNKMIGTKPLYVSLAQRRDVRRQQLEGQIMQRNQMRMQQAPM-MGPGY-----MQPQMYY 551
Query: 426 GLGQQFLYGQAPPAII----PPQMPPRGHAYRYPLGRNM 460
G G QA ++ P MPPRG RYP G+ M
Sbjct: 552 GPGPGGYPPQAGRGVMGYPQPGMMPPRG---RYPPGQPM 587
Score = 42.7 bits (99), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 62/123 (50%), Gaps = 1/123 (0%)
Query: 2 AQIQVQHQAQMSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRV 61
AQ + + Q++++ + A N++ +LYV +LD +V D +L F G + S +V
Sbjct: 409 AQKKSERQSELARSHEAAKQERQNKYAGVNLYVKNLDDDVDDDKLRAEFEAFGTITSCKV 468
Query: 62 CRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIF 121
R+ S G+G+V ++ P +A +A+ +N + K + + + R R+ G I
Sbjct: 469 MRN-ERDISKGFGFVCFSTPDEATKAVTEMNNKMIGTKPLYVSLAQRRDVRRQQLEGQIM 527
Query: 122 IKN 124
+N
Sbjct: 528 QRN 530
>gi|342879464|gb|EGU80711.1| hypothetical protein FOXB_08751 [Fusarium oxysporum Fo5176]
Length = 794
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 208/424 (49%), Positives = 293/424 (69%), Gaps = 53/424 (12%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVG+LD +VT++ L++LFSQ+G V S+RVCRD TRRSLGY YVNY AD +AL
Sbjct: 58 SASLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNATADGEKAL 117
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LN+T + + RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++FGNILSCK
Sbjct: 118 EELNYTLIKGRPCRIMWSQRDPALRKNGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCK 177
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKT 206
+A D +G SKG+GFV +E E+A AI +NGML+N+K+V+VGH + K++R++ +K
Sbjct: 178 VAQDENGNSKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKDRQSKFEEMKA 237
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
F NV+VKN+ T++D +++F ++G +TS+ + RD +GKS+ FGFVNF + A+KAV
Sbjct: 238 NFTNVYVKNIAPDVTEDDFRELFEKFGDVTSSSLARDQEGKSRGFGFVNFTTHESASKAV 297
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
+ LNGK F ++ YVG+AQKK ERE+EL+ +E A E +K+QG+NLYIKNL D +DD+
Sbjct: 298 DDLNGKDFHGQDLYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLDDDVDDD 357
Query: 327 KLKELFSEFGTITSCKVMRD-PS------------------------------------- 348
KL+++FSEFG ITS KVMR+ P+
Sbjct: 358 KLRQMFSEFGPITSAKVMRETPTEGDEDKKEETQDDKEKENKEEAKEEANEETKEGEEAK 417
Query: 349 -------------GISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRA 395
G SKG GFV FS P++A++A+AEMN +MI +KPLYVA+AQRK+ R++
Sbjct: 418 DDKKTEKKSDKKLGKSKGFGFVCFSNPDDATKAVAEMNQRMINNKPLYVALAQRKDVRKS 477
Query: 396 RLQA 399
+L+A
Sbjct: 478 QLEA 481
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 157/293 (53%), Gaps = 21/293 (7%)
Query: 117 TGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAI 175
+ ++++ LD S+ L + FS G + S ++ D + +S G+ +V + + A+
Sbjct: 58 SASLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNATADGEKAL 117
Query: 176 DKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTI 235
++LN LI + + +R+ K NVF+KNLD + ++ L F +G I
Sbjct: 118 EELNYTLIKGRPCRI----MWSQRDPALRKNGQGNVFIKNLDVAIDNKALHDTFAAFGNI 173
Query: 236 TSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSERE---Q 292
S V +D +G SK +GFV++E + A++A++ +NG ++++ YVG K +R+ +
Sbjct: 174 LSCKVAQDENGNSKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKDRQSKFE 233
Query: 293 ELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISK 352
E+K F N+Y+KN+ + ++ +ELF +FG +TS + RD G S+
Sbjct: 234 EMKANF-------------TNVYVKNIAPDVTEDDFRELFEKFGDVTSSSLARDQEGKSR 280
Query: 353 GSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
G GFV F+T E AS+A+ ++NGK + LYV AQ+K ER L+ + R
Sbjct: 281 GFGFVNFTTHESASKAVDDLNGKDFHGQDLYVGRAQKKHEREEELRKSYEAAR 333
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 44/66 (66%)
Query: 511 QRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSV 570
Q+ +LGE ++P ++ + + A K+TGMLLEMD E+++L+E ALKAKV EA+ V
Sbjct: 659 QKQILGELIFPKIQAINGELAGKITGMLLEMDNAELVNLIEDDAALKAKVDEALAVYDEY 718
Query: 571 AQQQAN 576
+ Q +
Sbjct: 719 VKAQGS 724
>gi|378732913|gb|EHY59372.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 779
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 188/320 (58%), Positives = 247/320 (77%), Gaps = 2/320 (0%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVG+LD +VT++ L++LFS +GQV S+RVCRD TRRSLGY YVNY N AD RAL
Sbjct: 60 SASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERAL 119
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LN+T + + RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTFS FGNILSCK
Sbjct: 120 EDLNYTSIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDTFSQFGNILSCK 179
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKT 206
+A D G SKG+GFV +E E+A AI +NGML+NDK+VFVGH + K++R++ +K
Sbjct: 180 VAQDELGNSKGYGFVHYETAEAANQAIKSVNGMLLNDKKVFVGHHIAKRDRQSKLEEMKA 239
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
F NV++KN+DES +DE+ K+F YG + SA + RD +GKS+ FGFVNF + + AAKAV
Sbjct: 240 NFTNVYIKNIDESVSDEEFTKLFEPYGEVVSATITRDENGKSRGFGFVNFASHESAAKAV 299
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
E LN K+F ++ YVG+AQKK ERE+EL+ Q+E A E K+QG+NLY+KNL D +DD+
Sbjct: 300 EELNDKEFHGKKLYVGRAQKKHEREEELRRQYEAARMEKASKYQGVNLYVKNLTDDVDDD 359
Query: 327 KLKELFSEFGTITSCKVMRD 346
KL+ELFS +GTITS KVMRD
Sbjct: 360 KLRELFSSYGTITSAKVMRD 379
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 96/300 (32%), Positives = 162/300 (54%), Gaps = 21/300 (7%)
Query: 110 PSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENK 168
PS + ++++ LD S+ L + FSS G + S ++ D + +S G+ +V + N
Sbjct: 53 PSTAAQHSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNT 112
Query: 169 ESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKI 228
+ A++ LN I + + +R+ KT NVF+KNLD + ++ L
Sbjct: 113 ADGERALEDLNYTSIKGRPCRI----MWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDT 168
Query: 229 FGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKS 288
F ++G I S V +D G SK +GFV++E A+ A +A++++NG +D++ +VG K
Sbjct: 169 FSQFGNILSCKVAQDELGNSKGYGFVHYETAEAANQAIKSVNGMLLNDKKVFVGHHIAKR 228
Query: 289 ERE---QELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMR 345
+R+ +E+K F N+YIKN+ +S+ DE+ +LF +G + S + R
Sbjct: 229 DRQSKLEEMKANF-------------TNVYIKNIDESVSDEEFTKLFEPYGEVVSATITR 275
Query: 346 DPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
D +G S+G GFV F++ E A++A+ E+N K K LYV AQ+K ER L+ Q+ R
Sbjct: 276 DENGKSRGFGFVNFASHESAAKAVEELNDKEFHGKKLYVGRAQKKHEREEELRRQYEAAR 335
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 105/309 (33%), Positives = 141/309 (45%), Gaps = 93/309 (30%)
Query: 349 GISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQ----- 403
G SKG GFV FS P+EAS+A++EMN KM+ KPLYVA+AQRK+ RR +L+A
Sbjct: 440 GKSKGFGFVCFSNPDEASKAVSEMNQKMVNGKPLYVALAQRKDVRRNQLEASIQARNTLR 499
Query: 404 --------------MRPVAMGPS---VPP----RMP------MYPPGPSGLGQQFLYG-- 434
++P P +PP MP M PG G QF G
Sbjct: 500 QQQQAAAAGMPQGYIQPTVFYPGQQFLPPGAQRGMPFAGQPGMVIPGMQGGRGQFPGGFP 559
Query: 435 ----------QAPPAI-IPPQMP--------------------PRGHAYRYPLGR----N 459
Q PP +P QMP +G R GR
Sbjct: 560 QGGRGIPQGQQLPPNFGLPGQMPFIQNPALVNGMYNNPQALAQMQGQMGRGAGGRGQMQG 619
Query: 460 MQDFP--------------FDMGA-GSMLPVPVDMGAG-IPRRDASVGQPMP----ITAL 499
MQ P F G G M +P GAG IP + GQ +P I
Sbjct: 620 MQGMPPNMQGMGGMRGGPNFPQGGRGGMQNIPGGQGAGRIPPQ--GRGQMIPNREEINTP 677
Query: 500 ST--ALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALK 557
S+ LA+ QQ+ +LGE++YP ++Q++ + A K+TGMLLEMD +E+L L++ AL+
Sbjct: 678 SSLHNLASLPQSQQKQILGEAIYPKIQQIQPELAGKITGMLLEMDNSELLSLVDDDAALR 737
Query: 558 AKVAEAMEV 566
+KV EA+ V
Sbjct: 738 SKVDEALRV 746
>gi|356537017|ref|XP_003537028.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
[Glycine max]
Length = 502
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 207/411 (50%), Positives = 276/411 (67%), Gaps = 7/411 (1%)
Query: 12 MSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSL 71
M+ P VAA + SLYVGDL V D L++ F++ + SVRVCRD T +SL
Sbjct: 1 MAVPATVAA-------VPASLYVGDLHSEVVDHHLFEAFAEFKTMDSVRVCRDRVTMKSL 53
Query: 72 GYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDH 131
YGYVN+ + DA RA+ + N + LN K IR+M+SH DPS RKSG GN+F+KNL SID+
Sbjct: 54 CYGYVNFKSQQDAIRAMKLKNNSYLNGKVIRVMWSHPDPSARKSGRGNVFVKNLAGSIDN 113
Query: 132 KALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVG 191
LHD F +GNILS K+ G G+SKG+GFVQFE++ESA NAI+KLNG + DKQ++VG
Sbjct: 114 AGLHDLFQKYGNILSSKVVMSGDGKSKGYGFVQFESEESANNAIEKLNGSTVGDKQIYVG 173
Query: 192 HFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCF 251
F+RK +R K+ N+++KNLD T+ L++ F +G I S V+ +D +G SK F
Sbjct: 174 KFVRKGDRILPGYDAKYTNLYIKNLDSDITEALLQEKFSSFGKIISLVISKDDNGLSKGF 233
Query: 252 GFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQG 311
FVN+EN DDA KA+EA+NG KF + YV +AQKK+EREQ L QFE+ KE + K+Q
Sbjct: 234 AFVNYENPDDARKAMEAMNGLKFGSKNLYVARAQKKAEREQILHRQFEEKRKEQILKYQA 293
Query: 312 LNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAE 371
NLY+KN+ D + D++L++LFS GTITS KVMRD GISKG GFV FS PEEA++A+
Sbjct: 294 SNLYVKNIDDDVTDKELRDLFSSCGTITSVKVMRDDKGISKGFGFVCFSNPEEANKAVRS 353
Query: 372 MNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPP 422
NG M KPLY+A+AQRK +R+ +L ++ + G S P +PP
Sbjct: 354 FNGCMFHRKPLYIAIAQRKMDRKTQLNLHYAPQQTGLDGSSTPVIPGGFPP 404
>gi|297827151|ref|XP_002881458.1| PAB7 binding protein 7 [Arabidopsis lyrata subsp. lyrata]
gi|297327297|gb|EFH57717.1| PAB7 binding protein 7 [Arabidopsis lyrata subsp. lyrata]
Length = 609
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 237/568 (41%), Positives = 337/568 (59%), Gaps = 32/568 (5%)
Query: 28 LTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARA 87
+T SLYVGDL +VT+ LYD F++ + SVR+C+D ST RSL YGY N+ + DA A
Sbjct: 22 VTASLYVGDLHPSVTEGILYDAFAEFKSLTSVRLCKDASTGRSLCYGYANFLSRQDANLA 81
Query: 88 LDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSC 147
++ N + LN K IR+M+S R+P R++G GN+F+KNL +SI + L D F FGNI+SC
Sbjct: 82 IEKKNHSLLNGKMIRVMWSVREPDARRNGVGNVFVKNLPESITNAVLQDMFKKFGNIVSC 141
Query: 148 KIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK 207
K+AT G+S+G+GFVQFE +++A AI+KLN + K+++VG F++K +R + K
Sbjct: 142 KVATFEDGKSRGYGFVQFEQEDAAHAAIEKLNSTTVAGKEIYVGKFMKKTDR--AKAEEK 199
Query: 208 FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVE 267
+ NV++KNLD ++ L++ F E+G I S + +D +G K + FVNF+ +DA A E
Sbjct: 200 YTNVYMKNLDADVNEDLLREKFSEFGKIVSLAIAKDENGLCKGYAFVNFDKPEDARWAAE 259
Query: 268 ALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEK 327
+NG +F + YVG+AQKK+EREQ L+ QF++ +E + K + N+Y+KN+ + +E+
Sbjct: 260 TMNGTRFGSKCLYVGRAQKKAEREQLLREQFKEKHEEQMMKAKVSNIYVKNINVGVTEEE 319
Query: 328 LKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 387
L++ FS+ GTITS K+M D G SKG GFV FSTPEEA A+ +GKM KPLYVA A
Sbjct: 320 LRKHFSQCGTITSTKLMCDEKGKSKGFGFVCFSTPEEAIDAVKTFHGKMFHGKPLYVATA 379
Query: 388 QRKEERRARLQAQFSQMRPVAMGPSVPPRMP-MYPP-GPSGLGQQFLYGQAPPAIIPPQM 445
Q+KE+R+ +LQ QF S +P Y P + +Y PP M
Sbjct: 380 QKKEDRKMQLQVQFGNCVEGGGSSSSASFIPGTYAPLYYTNTHPGMVYQSYPPTWKSANM 439
Query: 446 P----PRGHAYRYP-----------------LGRNMQDF-PFDMGAGSMLPVPVDMGAGI 483
P A YP L RN + P + MLP+ D
Sbjct: 440 ISSSYPNSQALTYPSVVGNAPRKIKQNRKGKLDRNAVSYVPNVYQSTQMLPLSRDFSNQQ 499
Query: 484 PRRDASVGQPM--PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEM 541
R G+ M PI + + ++ LLGE LYPLVE+LE A K+TGMLLEM
Sbjct: 500 LNRTYGRGKEMKKPIQQRQS----ETIVMEKQLLGELLYPLVEKLEPQLANKITGMLLEM 555
Query: 542 DQTEVLHLLESPEALKAKVAEAMEVLRS 569
D++E+L LL+SP+ L +V EA EVL+S
Sbjct: 556 DKSELLLLLKSPQELAVRVEEAFEVLKS 583
>gi|426360413|ref|XP_004047438.1| PREDICTED: polyadenylate-binding protein 1 [Gorilla gorilla
gorilla]
Length = 682
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 213/430 (49%), Positives = 287/430 (66%), Gaps = 39/430 (9%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYAN---------- 80
++++ +LD ++ + LYD FS G +LS +V D + S GYG+V++
Sbjct: 29 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEK 86
Query: 81 ----------------------PADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTG 118
PA A RALD +NF + K +RIM+S RDPS+RKSG G
Sbjct: 87 MNGMLLNXXXXEASNIDSENVFPA-AERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVG 145
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKL 178
NIFIKNLDKSID+KAL+DTFS+FGNILSCK+ D +G SKG+GFV FE +E+A+ AI+K+
Sbjct: 146 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKM 204
Query: 179 NGMLINDKQVFVGHFLRKQERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTIT 236
NGML+ND++VFVG F ++ERE A +F NV++KN E DE LK +FG++G
Sbjct: 205 NGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPAL 264
Query: 237 SAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKG 296
S VM D GKSK FGFV+FE +DA KAV+ +NGK+ + ++ YVG+AQKK ER+ ELK
Sbjct: 265 SVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKR 324
Query: 297 QFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGF 356
+FEQ ++ + ++QG+NLY+KNL D IDDE+L++ FS FGTITS KVM + G SKG GF
Sbjct: 325 KFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGF 383
Query: 357 VAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPR 416
V FS+PEEA++A+ EMNG+++ +KPLYVA+AQRKEER+A L Q+ Q P
Sbjct: 384 VCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVI 443
Query: 417 MPMYPPGPSG 426
P P PSG
Sbjct: 444 NPYQPAPPSG 453
Score = 282 bits (721), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 153/342 (44%), Positives = 214/342 (62%), Gaps = 39/342 (11%)
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF + K +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FGNILSCK+
Sbjct: 1 MNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVV 60
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQ----------------------- 187
D +G SKG+GFV FE +E+A+ AI+K+NGML+N
Sbjct: 61 CDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNXXXXEASNIDSENVFPAAERALDTMN 119
Query: 188 --VFVGHFLR--KQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD 243
V G +R +R+ K+ N+F+KNLD+S ++ L F +G I S V+ D
Sbjct: 120 FDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD 179
Query: 244 GDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMK 303
+G SK +GFV+FE + A +A+E +NG +DR+ +VG+ + + ERE EL + ++
Sbjct: 180 ENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFT- 237
Query: 304 ETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPE 363
N+YIKN G+ +DDE+LK+LF +FG S KVM D SG SKG GFV+F E
Sbjct: 238 ---------NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHE 288
Query: 364 EASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
+A +A+ EMNGK + K +YV AQ+K ER+ L+ +F QM+
Sbjct: 289 DAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 330
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 107/197 (54%), Gaps = 22/197 (11%)
Query: 21 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYAN 80
GA +F T++Y+ + ++ D +L DLF + G LSV+V D S +S G+G+V++
Sbjct: 230 GARAKEF--TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESG-KSKGFGFVSFER 286
Query: 81 PADAARALDVLNFTPLNNKSIRIMYSHR-----------------DPSIRKSGTGNIFIK 123
DA +A+D +N LN K I + + + D R G N+++K
Sbjct: 287 HEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGV-NLYVK 345
Query: 124 NLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLI 183
NLD ID + L FS FG I S K+ +G G+SKGFGFV F + E A A+ ++NG ++
Sbjct: 346 NLDDGIDDERLRKEFSPFGTITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTEMNGRIV 404
Query: 184 NDKQVFVGHFLRKQERE 200
K ++V RK+ER+
Sbjct: 405 ATKPLYVALAQRKEERQ 421
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA+A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 590 PLTA--SMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPE 647
Query: 555 ALKAKVAEAMEVLRSVAQQQA 575
+L++KV EA+ VL++ ++A
Sbjct: 648 SLRSKVDEAVAVLQAHQAKEA 668
>gi|308499747|ref|XP_003112059.1| CRE-PAB-1 protein [Caenorhabditis remanei]
gi|308268540|gb|EFP12493.1| CRE-PAB-1 protein [Caenorhabditis remanei]
Length = 695
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 225/451 (49%), Positives = 285/451 (63%), Gaps = 46/451 (10%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
+G+ + SLYVGDL +V +S L++ FS G VLS+RVCRD +TR SLGY YVN+ PA
Sbjct: 25 TGSSYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPA 84
Query: 83 D----------------AARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLD 126
D A RA+D +NF L+ K +RIM+S RDP++R+SG GNIFIKNLD
Sbjct: 85 DGKSFFQFMSFLTFLITAERAMDTMNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLD 144
Query: 127 KSIDHKALHDTFSSFGNILSCK-----------IATDGSGQSKGFGFVQFENKESAQNAI 175
K ID+K+++DTFS FGNILSCK +A D G SKG+GFV FE +E+AQNAI
Sbjct: 145 KVIDNKSIYDTFSLFGNILSCKVTFPIEHLKTVVAIDDEGSSKGYGFVHFETEEAAQNAI 204
Query: 176 DKLNGMLINDKQVFVGHF--LRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYG 233
K+NGML+ K+VFVG F ++ RE KF NV+VKN + E L+K+F +YG
Sbjct: 205 QKVNGMLLAGKKVFVGKFQPRAQRNRELGETAKKFTNVYVKNFGDHYNKETLEKLFAKYG 264
Query: 234 TITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFD--DREWYVGKAQKKSERE 291
ITS VM DGKSK FGFV F ++A AV+ALN D D + +V +AQKKSER
Sbjct: 265 AITSCDVMTS-DGKSKGFGFVAFAQPEEAEAAVQALNDSAVDGSDLKLHVCRAQKKSERH 323
Query: 292 QELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCK--------- 342
ELK + EQ E + K+QG+NLY+KNL +S+DDE LK+ F FG ITS K
Sbjct: 324 AELKKKHEQHKVERMQKYQGVNLYVKNLDESVDDEALKKQFENFGNITSAKVGLVPLEFF 383
Query: 343 -----VMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARL 397
VM D +G SKG GFV F PEEA+ A+ EMN KM+ SKPLYVA+AQRKE+RRA+L
Sbjct: 384 ISLFQVMTDENGRSKGFGFVCFEKPEEATTAVTEMNSKMVCSKPLYVALAQRKEDRRAQL 443
Query: 398 QAQFSQMRPVAMGPSVPPRMPMYPPGPSGLG 428
+Q+ Q S P MY P +G G
Sbjct: 444 ASQYMQRLASMRMHSNVPGGGMYNPAQTGPG 474
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 56/83 (67%), Gaps = 6/83 (7%)
Query: 490 VGQPMPITALSTALANASPEQQRTLLGESLYPLVEQL---ERDAAAKVTGMLLEMDQTEV 546
+G P+T S LA A+P++Q+ LLGE +Y L+E+L +DA K+TGM+LE+D +E+
Sbjct: 613 IGGQEPLT--SAMLAAAAPQEQKQLLGERIYALIEKLYPGHKDAG-KITGMMLEIDNSEL 669
Query: 547 LHLLESPEALKAKVAEAMEVLRS 569
+ +L+ + ++KV EA VL S
Sbjct: 670 IMMLQDSDLFRSKVDEAASVLAS 692
>gi|226287551|gb|EEH43064.1| polyadenylate-binding protein [Paracoccidioides brasiliensis Pb18]
Length = 761
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 241/553 (43%), Positives = 322/553 (58%), Gaps = 83/553 (15%)
Query: 19 AAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNY 78
+A + Q + SLYVG+LD +VT++ L++LFS +GQV S+RVCRD TRRSLGY YVNY
Sbjct: 43 SAAPTNAQPHSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNY 102
Query: 79 ANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTF 138
N AD RAL+ LN+T + K RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF
Sbjct: 103 NNTADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTF 162
Query: 139 SSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQE 198
++FGNILSCK+A D G SKG+GFV +E E+A NAI +NGML+N+K+VFVGH + K++
Sbjct: 163 AAFGNILSCKVAQDEFGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIAKKD 222
Query: 199 RETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGD-GKSKCFGFVN 255
R++ +K F NV+VKNL+ T+E+ +++F +YG ITSA + RD + GKS+ FGFVN
Sbjct: 223 RQSKFEEMKANFTNVYVKNLEPEVTNEEFRELFEKYGEITSASLSRDNETGKSRGFGFVN 282
Query: 256 FENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLY 315
F N D AA AVE LN K++ ++ YVG+AQKK ERE+EL+ Q E A E K+QG+NLY
Sbjct: 283 FVNHDSAAAAVEDLNDKEYKGQKLYVGRAQKKHEREEELRKQHEAARVEKASKYQGVNLY 342
Query: 316 IKNLGD----------------------------------------------SIDDEKLK 329
+KNL D ++ +E K
Sbjct: 343 VKNLTDDIDDEKLRDLFIGFGNITSARVMRDTISDAGSESEKEKEASKDNKENVKEETKK 402
Query: 330 ELFSEFGTITSCKV----MRDPS----GISKGSGFVAFSTPEEASRALAEMNGKMIVSKP 381
E E + K + P+ G SKG GFV FS P+EAS+A+ EMN +M+ KP
Sbjct: 403 EAGGEDSAEKTDKAEKPDTKKPTDKKLGKSKGFGFVCFSNPDEASKAVTEMNQRMVNGKP 462
Query: 382 LYVAVAQRKEERRARLQAQF-------SQMRPVAMGPSVPPRMP--MYPPGPSGL----G 428
LYVA+AQRK+ R+++L+A Q A G S P P YPPG G
Sbjct: 463 LYVALAQRKDVRKSQLEASIQARNTIRQQQVAAAAGMSQPFMQPAVYYPPGQQGFIPANA 522
Query: 429 QQ--FLYGQAPPAIIPPQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRR 486
Q+ + Q P ++P P G +YP G Q G LP P G G
Sbjct: 523 QRGGMAFAQQPGMVLPGM--PGGRPGQYPGGFPQQGGRGLAGPNQQLP-PNAFGLG---- 575
Query: 487 DASVGQPMPITAL 499
Q +PI AL
Sbjct: 576 ----AQGLPIGAL 584
>gi|15228016|ref|NP_181204.1| poly(A) binding protein 7 [Arabidopsis thaliana]
gi|12229883|sp|Q9ZQA8.1|PABPX_ARATH RecName: Full=Probable polyadenylate-binding protein At2g36660;
Short=PABP; Short=Poly(A)-binding protein At2g36660
gi|4415911|gb|AAD20142.1| putative poly(A) binding protein [Arabidopsis thaliana]
gi|330254185|gb|AEC09279.1| poly(A) binding protein 7 [Arabidopsis thaliana]
Length = 609
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 237/566 (41%), Positives = 344/566 (60%), Gaps = 28/566 (4%)
Query: 28 LTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARA 87
+T SLYVGDL +VT+ LYD F++ + SVR+C+D S+ RSL YGY N+ + DA A
Sbjct: 22 VTASLYVGDLHPSVTEGILYDAFAEFKSLTSVRLCKDASSGRSLCYGYANFLSRQDANLA 81
Query: 88 LDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSC 147
++ N + LN K IR+M+S R P R++G GN+F+KNL +S+ + L D F FGNI+SC
Sbjct: 82 IEKKNNSLLNGKMIRVMWSVRAPDARRNGVGNVFVKNLPESVTNAVLQDMFKKFGNIVSC 141
Query: 148 KIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK 207
K+AT G+S+G+GFVQFE +++A AI LN ++ DK+++VG F++K +R V + K
Sbjct: 142 KVATLEDGKSRGYGFVQFEQEDAAHAAIQTLNSTIVADKEIYVGKFMKKTDR--VKPEEK 199
Query: 208 FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVE 267
+ N+++KNLD +++ L++ F E+G I S + +D + + + FVNF+N +DA +A E
Sbjct: 200 YTNLYMKNLDADVSEDLLREKFAEFGKIVSLAIAKDENRLCRGYAFVNFDNPEDARRAAE 259
Query: 268 ALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEK 327
+NG KF + YVG+AQKK+EREQ L+ QF++ +E + N+Y+KN+ ++ +E+
Sbjct: 260 TVNGTKFGSKCLYVGRAQKKAEREQLLREQFKEKHEEQKMIAKVSNIYVKNVNVAVTEEE 319
Query: 328 LKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 387
L++ FS+ GTITS K+M D G SKG GFV FSTPEEA A+ +G+M KPLYVA+A
Sbjct: 320 LRKHFSQCGTITSTKLMCDEKGKSKGFGFVCFSTPEEAIDAVKTFHGQMFHGKPLYVAIA 379
Query: 388 QRKEERRARLQAQFS---QMRPVAMGPSVPP--RMPMY----PPG------PSGLGQQFL 432
Q+KE+R+ +LQ QF + R + SV P P+Y PG P +
Sbjct: 380 QKKEDRKMQLQVQFGNRVEARKSSSSASVNPGTYAPLYYTNTHPGMVYQSYPLMWKSANM 439
Query: 433 YGQAPP---AIIPPQM----PPRGHAYRY-PLGRNMQDF-PFDMGAGSMLPVPVDMGAGI 483
G + P A+ P M P + R L RN + P + MLP+ D
Sbjct: 440 IGSSYPNSEAVTYPPMVANAPSKNRQNRIGKLDRNAVSYVPNVYQSTQMLPLSRDFSKQQ 499
Query: 484 PRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQ 543
R G+ M + E Q LLGE L+PLVE+LE A K+TGMLLEMD+
Sbjct: 500 HSRTYGRGKEMKKSIQQRQSETVGMEMQ--LLGELLHPLVEKLEPQLANKITGMLLEMDK 557
Query: 544 TEVLHLLESPEALKAKVAEAMEVLRS 569
+E+L LL+SPE L +V EA EVL+S
Sbjct: 558 SELLLLLKSPEDLAVRVDEAFEVLKS 583
>gi|358372137|dbj|GAA88742.1| polyadenylate-binding protein [Aspergillus kawachii IFO 4308]
Length = 763
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 188/327 (57%), Positives = 248/327 (75%), Gaps = 2/327 (0%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
++ NQ + SLYVG+LD +VT++ LY+LFS +GQV S+RVCRD TRRSLGY YVNY N
Sbjct: 44 SAANQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNT 103
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
AD RAL+ LN+T + K RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++F
Sbjct: 104 ADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAF 163
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+A D G SKG+GFV +E E+A NAI +NGML+NDK+VFVGH + K++R++
Sbjct: 164 GNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQS 223
Query: 202 V--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+K F NV++KNLD D++ +K+F ++G ITSA + RD +GKS+ FGFVNF
Sbjct: 224 KFEEMKANFTNVYIKNLDSEIDDDEFRKMFEKFGEITSATLSRDQEGKSRGFGFVNFSTH 283
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+ A AVE +N K+ ++ YVG+AQKK ERE+EL+ Q+E A E K+QG+NLY+KNL
Sbjct: 284 ESAQAAVEEMNDKEIRSQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNL 343
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRD 346
D IDDEKL+ELF +GTITS KVMRD
Sbjct: 344 TDDIDDEKLRELFGPYGTITSAKVMRD 370
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 202/637 (31%), Positives = 295/637 (46%), Gaps = 150/637 (23%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ +LD + + L+D F+ G +LS +V +D S GYG+V+Y A A+
Sbjct: 141 NVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQD-EFGNSKGYGFVHYETAEAANNAIKH 199
Query: 91 LNFTPLNNKSIRIMY--SHRDPSIR----KSGTGNIFIKNLDKSIDHKALHDTFSSFGNI 144
+N LN+K + + + S +D + K+ N++IKNLD ID F FG I
Sbjct: 200 VNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNLDSEIDDDEFRKMFEKFGEI 259
Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET--- 201
S ++ D G+S+GFGFV F ESAQ A++++N I ++++VG +K ERE
Sbjct: 260 TSATLSRDQEGKSRGFGFVNFSTHESAQAAVEEMNDKEIRSQKLYVGRAQKKHEREEELR 319
Query: 202 ---------VAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFG 252
A K + N++VKNL + DE L+++FG YGTITSA VMRD +
Sbjct: 320 KQYEAARLEKASKYQGVNLYVKNLTDDIDDEKLRELFGPYGTITSAKVMRDTN------- 372
Query: 253 FVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGL 312
V E++ ++A GK +K++ +E + KE + +
Sbjct: 373 -VERESSPESA------------------GK-EKEANKEND---------KEATPEAEKA 403
Query: 313 NLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEM 372
+ +EK KE + K + P G SKG GFV FS+P+EAS+A+ EM
Sbjct: 404 EEKAEEKPAESSEEKDKE---------AKKSDKKPFGKSKGFGFVCFSSPDEASKAVTEM 454
Query: 373 NGKMIVSKPLYVAVAQRKEERRARLQAQFSQ-------------------MRP-VAMGPS 412
N +M+ KPLYVA+AQRK+ RR++L+A M+P V GP
Sbjct: 455 NQRMVNGKPLYVALAQRKDVRRSQLEASIQARNTIRQQQAAAAAGMPQPYMQPAVFYGPG 514
Query: 413 VPPRMP------MYPPGPSGL----------------GQQFLYGQAPPAIIPP---QMPP 447
+P +PP P + GQQ G P IPP Q P
Sbjct: 515 QQGFIPGGQRGMAFPPQPGMVMGIPGGRPGQYPGPFPGQQGGRGMGPNQQIPPNFAQGIP 574
Query: 448 RG--------HAYRYPLGRNMQDFPFDMGAGSMLPVP-VDMGAG------------IPRR 486
G + YP M F GAG VP + MG G +P +
Sbjct: 575 MGMQGPGAIPNGMGYP---QMAQVQFGRGAGGRGQVPGMPMGQGMRGGPGYGQGRGVPVQ 631
Query: 487 DASV-------GQPMPITAL----------STALANASPEQQRTLLGESLYPLVEQLERD 529
+ GQ A + L A P QQ+ +LGE+LYP ++ + +
Sbjct: 632 QGQIRPGQGGRGQNAAAPAGPQEGAAGGVNAQTLGAAPPAQQKQMLGEALYPKIQAQQPE 691
Query: 530 AAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEV 566
A K+TGMLLEMD TE+L LLE EAL+AKV EA+ V
Sbjct: 692 LAGKITGMLLEMDNTELLSLLEDEEALRAKVDEALSV 728
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 103/293 (35%), Positives = 160/293 (54%), Gaps = 21/293 (7%)
Query: 117 TGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAI 175
+ ++++ LD S+ L++ FSS G + S ++ D + +S G+ +V + N + A+
Sbjct: 51 SASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERAL 110
Query: 176 DKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTI 235
+ LN LI K + +R+ KT NVF+KNLD + ++ L F +G I
Sbjct: 111 EDLNYTLIKGKPCRI----MWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNI 166
Query: 236 TSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSERE---Q 292
S V +D G SK +GFV++E A+ A A++ +NG +D++ +VG K +R+ +
Sbjct: 167 LSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFE 226
Query: 293 ELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISK 352
E+K F N+YIKNL IDD++ +++F +FG ITS + RD G S+
Sbjct: 227 EMKANF-------------TNVYIKNLDSEIDDDEFRKMFEKFGEITSATLSRDQEGKSR 273
Query: 353 GSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
G GFV FST E A A+ EMN K I S+ LYV AQ+K ER L+ Q+ R
Sbjct: 274 GFGFVNFSTHESAQAAVEEMNDKEIRSQKLYVGRAQKKHEREEELRKQYEAAR 326
>gi|317025248|ref|XP_001388739.2| polyadenylate-binding protein, cytoplasmic and nuclear [Aspergillus
niger CBS 513.88]
gi|350637942|gb|EHA26298.1| hypothetical protein ASPNIDRAFT_46760 [Aspergillus niger ATCC 1015]
Length = 764
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 188/326 (57%), Positives = 247/326 (75%), Gaps = 2/326 (0%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
+ NQ + SLYVG+LD +VT++ LY+LFS +GQV S+RVCRD TRRSLGY YVNY N A
Sbjct: 47 AANQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTA 106
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
D RAL+ LN+T + K RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++FG
Sbjct: 107 DGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFG 166
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 202
NILSCK+A D G SKG+GFV +E E+A NAI +NGML+NDK+VFVGH + K++R++
Sbjct: 167 NILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSK 226
Query: 203 --AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
+K F NV++KNLD D++ +K+F ++G ITSA + RD +GKS+ FGFVNF +
Sbjct: 227 FEEMKANFTNVYIKNLDSEIDDDEFRKMFEKFGEITSATLSRDQEGKSRGFGFVNFSTHE 286
Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
A AVE +N K+ ++ YVG+AQKK ERE+EL+ Q+E A E K+QG+NLY+KNL
Sbjct: 287 SAQAAVEEMNDKEIRSQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLT 346
Query: 321 DSIDDEKLKELFSEFGTITSCKVMRD 346
D IDDEKL+ELF +GTITS KVMRD
Sbjct: 347 DDIDDEKLRELFGPYGTITSAKVMRD 372
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 104/300 (34%), Positives = 163/300 (54%), Gaps = 21/300 (7%)
Query: 110 PSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENK 168
P+ + + ++++ LD S+ L++ FSS G + S ++ D + +S G+ +V + N
Sbjct: 46 PAANQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNT 105
Query: 169 ESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKI 228
+ A++ LN LI K + +R+ KT NVF+KNLD + ++ L
Sbjct: 106 ADGERALEDLNYTLIKGKPCRI----MWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDT 161
Query: 229 FGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKS 288
F +G I S V +D G SK +GFV++E A+ A A++ +NG +D++ +VG K
Sbjct: 162 FAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKK 221
Query: 289 ERE---QELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMR 345
+R+ +E+K F N+YIKNL IDD++ +++F +FG ITS + R
Sbjct: 222 DRQSKFEEMKANF-------------TNVYIKNLDSEIDDDEFRKMFEKFGEITSATLSR 268
Query: 346 DPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
D G S+G GFV FST E A A+ EMN K I S+ LYV AQ+K ER L+ Q+ R
Sbjct: 269 DQEGKSRGFGFVNFSTHESAQAAVEEMNDKEIRSQKLYVGRAQKKHEREEELRKQYEAAR 328
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 104/311 (33%), Positives = 137/311 (44%), Gaps = 98/311 (31%)
Query: 345 RDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQ- 403
+ P G SKG GFV FS+P+EAS+A+ EMN +M+ KPLYVA+AQRK+ RR++L+A
Sbjct: 428 KKPFGKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKPLYVALAQRKDVRRSQLEASIQAR 487
Query: 404 ------------------MRP-VAMGPSVPPRMP------MYPPGPSGL----------- 427
M+P V GP +P +PP P +
Sbjct: 488 NTIRQQQAAAAAGMPQPYMQPAVFYGPGQQGFIPGGQRGMAFPPQPGMVMGIPGGRPGQY 547
Query: 428 -----GQQFLYGQAPPAIIPP---QMPPRG--------HAYRYPLGRNMQDFPFDMGAGS 471
GQQ G P IPP Q P G + YP M F GAG
Sbjct: 548 PGPFPGQQGGRGMGPNQQIPPNFAQGIPMGMQGPGGIPNGMGYP---QMAQVQFGRGAGG 604
Query: 472 MLPVP-VDMGAGI-----------------------------------PRRDASVGQPMP 495
VP + MG G+ P+ A+ G
Sbjct: 605 RGQVPGMPMGQGMRGGPGYGQGRGAPVQQGQMRPGQGGRGQNAAAPAGPQEGAAGG---- 660
Query: 496 ITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEA 555
+ L A P QQ+ +LGE+LYP ++ + + A K+TGMLLEMD TE+L LLE EA
Sbjct: 661 --VNAQTLGAAPPAQQKQMLGEALYPKIQAQQPELAGKITGMLLEMDNTELLSLLEDEEA 718
Query: 556 LKAKVAEAMEV 566
L+AKV EA+ V
Sbjct: 719 LRAKVDEALSV 729
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 123/286 (43%), Gaps = 51/286 (17%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
T++Y+ +LD + D + +F + G++ S + RD + S G+G+VN++ A A++
Sbjct: 235 TNVYIKNLDSEIDDDEFRKMFEKFGEITSATLSRDQEGK-SRGFGFVNFSTHESAQAAVE 293
Query: 90 VLNFTPLNNKSI---RIMYSH-RDPSIRKSGTG------------NIFIKNLDKSIDHKA 133
+N + ++ + R H R+ +RK N+++KNL ID +
Sbjct: 294 EMNDKEIRSQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLTDDIDDEK 353
Query: 134 LHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHF 193
L + F +G I S K+ D E +S +A + NDK+
Sbjct: 354 LRELFGPYGTITSAKVMRD----------TNVERDQSPDSAGKEKEADKENDKEATPEAE 403
Query: 194 LRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGF 253
++ E + ++ + K D KK FG KSK FGF
Sbjct: 404 KAEKAEEKPSESSEEKDKEAKKSD--------KKPFG----------------KSKGFGF 439
Query: 254 VNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFE 299
V F + D+A+KAV +N + + + YV AQ+K R +L+ +
Sbjct: 440 VCFSSPDEASKAVTEMNQRMVNGKPLYVALAQRKDVRRSQLEASIQ 485
>gi|158512764|sp|A2Q848.1|PABP_ASPNC RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|134054831|emb|CAK43671.1| unnamed protein product [Aspergillus niger]
Length = 731
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 188/326 (57%), Positives = 247/326 (75%), Gaps = 2/326 (0%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
+ NQ + SLYVG+LD +VT++ LY+LFS +GQV S+RVCRD TRRSLGY YVNY N A
Sbjct: 47 AANQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTA 106
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
D RAL+ LN+T + K RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++FG
Sbjct: 107 DGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFG 166
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 202
NILSCK+A D G SKG+GFV +E E+A NAI +NGML+NDK+VFVGH + K++R++
Sbjct: 167 NILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSK 226
Query: 203 --AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
+K F NV++KNLD D++ +K+F ++G ITSA + RD +GKS+ FGFVNF +
Sbjct: 227 FEEMKANFTNVYIKNLDSEIDDDEFRKMFEKFGEITSATLSRDQEGKSRGFGFVNFSTHE 286
Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
A AVE +N K+ ++ YVG+AQKK ERE+EL+ Q+E A E K+QG+NLY+KNL
Sbjct: 287 SAQAAVEEMNDKEIRSQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLT 346
Query: 321 DSIDDEKLKELFSEFGTITSCKVMRD 346
D IDDEKL+ELF +GTITS KVMRD
Sbjct: 347 DDIDDEKLRELFGPYGTITSAKVMRD 372
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 104/300 (34%), Positives = 163/300 (54%), Gaps = 21/300 (7%)
Query: 110 PSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENK 168
P+ + + ++++ LD S+ L++ FSS G + S ++ D + +S G+ +V + N
Sbjct: 46 PAANQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNT 105
Query: 169 ESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKI 228
+ A++ LN LI K + +R+ KT NVF+KNLD + ++ L
Sbjct: 106 ADGERALEDLNYTLIKGKPCRI----MWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDT 161
Query: 229 FGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKS 288
F +G I S V +D G SK +GFV++E A+ A A++ +NG +D++ +VG K
Sbjct: 162 FAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKK 221
Query: 289 ERE---QELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMR 345
+R+ +E+K F N+YIKNL IDD++ +++F +FG ITS + R
Sbjct: 222 DRQSKFEEMKANF-------------TNVYIKNLDSEIDDDEFRKMFEKFGEITSATLSR 268
Query: 346 DPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
D G S+G GFV FST E A A+ EMN K I S+ LYV AQ+K ER L+ Q+ R
Sbjct: 269 DQEGKSRGFGFVNFSTHESAQAAVEEMNDKEIRSQKLYVGRAQKKHEREEELRKQYEAAR 328
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/303 (31%), Positives = 128/303 (42%), Gaps = 98/303 (32%)
Query: 345 RDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQ- 403
+ P G SKG GFV FS+P+EAS+A+ EMN +M+ KPLYVA+AQRK+ RR++L+A
Sbjct: 428 KKPFGKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKPLYVALAQRKDVRRSQLEASIQAR 487
Query: 404 ------------------MRP-VAMGPSVPPRMP------MYPPGPSGL----------- 427
M+P V GP +P +PP P +
Sbjct: 488 NTIRQQQAAAAAGMPQPYMQPAVFYGPGQQGFIPGGQRGMAFPPQPGMVMGIPGGRPGQY 547
Query: 428 -----GQQFLYGQAPPAIIPP---QMPPRG--------HAYRYPLGRNMQDFPFDMGAGS 471
GQQ G P IPP Q P G + YP M F GAG
Sbjct: 548 PGPFPGQQGGRGMGPNQQIPPNFAQGIPMGMQGPGGIPNGMGYP---QMAQVQFGRGAGG 604
Query: 472 MLPVP-VDMGAGI-----------------------------------PRRDASVGQPMP 495
VP + MG G+ P+ A+ G
Sbjct: 605 RGQVPGMPMGQGMRGGPGYGQGRGAPVQQGQMRPGQGGRGQNAAAPAGPQEGAAGG---- 660
Query: 496 ITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEA 555
+ L A P QQ+ +LGE+LYP ++ + + A K+TGMLLEMD TE+L L P A
Sbjct: 661 --VNAQTLGAAPPAQQKQMLGEALYPKIQAQQPELAGKITGMLLEMDNTELLSLTRKPCA 718
Query: 556 LKA 558
++
Sbjct: 719 PRS 721
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 123/286 (43%), Gaps = 51/286 (17%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
T++Y+ +LD + D + +F + G++ S + RD + S G+G+VN++ A A++
Sbjct: 235 TNVYIKNLDSEIDDDEFRKMFEKFGEITSATLSRDQEGK-SRGFGFVNFSTHESAQAAVE 293
Query: 90 VLNFTPLNNKSI---RIMYSH-RDPSIRKSGTG------------NIFIKNLDKSIDHKA 133
+N + ++ + R H R+ +RK N+++KNL ID +
Sbjct: 294 EMNDKEIRSQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLTDDIDDEK 353
Query: 134 LHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHF 193
L + F +G I S K+ D E +S +A + NDK+
Sbjct: 354 LRELFGPYGTITSAKVMRD----------TNVERDQSPDSAGKEKEADKENDKEATPEAE 403
Query: 194 LRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGF 253
++ E + ++ + K D KK FG KSK FGF
Sbjct: 404 KAEKAEEKPSESSEEKDKEAKKSD--------KKPFG----------------KSKGFGF 439
Query: 254 VNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFE 299
V F + D+A+KAV +N + + + YV AQ+K R +L+ +
Sbjct: 440 VCFSSPDEASKAVTEMNQRMVNGKPLYVALAQRKDVRRSQLEASIQ 485
>gi|349803919|gb|AEQ17432.1| putative poly binding cytoplasmic 1 [Hymenochirus curtipes]
Length = 590
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/340 (58%), Positives = 253/340 (74%), Gaps = 5/340 (1%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
S + SLYVGDL +VT++ LY+ FS G +LS+RVCRD+ TRRSLGY YVN+ PA
Sbjct: 4 SAPSYPMASLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPA 63
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
DA RALD +NF + K +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FG
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFG 123
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 202
NILSCK+ D +G SKG+GFV FE +E+A+ AIDK+NGML+ND++VFVG F ++ERE
Sbjct: 124 NILSCKVVCDENG-SKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSRKEREAE 182
Query: 203 --AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
A +F NV++KN E DE LK++FG+YG S VM D GKSK FGFV+FE +
Sbjct: 183 LGARAKEFTNVYIKNFGEDMDDERLKEMFGKYGPALSVKVMTDDSGKSKGFGFVSFERHE 242
Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
DA KAV+ +NGK + + YVG+A KK ER+ ELK +FEQ ++ + ++QG+NLY+KNL
Sbjct: 243 DAQKAVDDMNGKDMNGKAIYVGRA-KKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLD 301
Query: 321 DSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFS 360
D IDDE+L++ FS FGTITS KVM + G SKG GFV FS
Sbjct: 302 DGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFS 340
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 105/298 (35%), Positives = 173/298 (58%), Gaps = 17/298 (5%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFEN 167
+PS ++++ +L + + L++ FS G ILS ++ D + +S G+ +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
A+ A+D +N +I K V + +R+ K+ N+F+KNLD+S ++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYD 117
Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
F +G I S V+ D +G SK +GFV+FE + A +A++ +NG +DR+ +VG+ + +
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSR 176
Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
ERE EL + ++ N+YIKN G+ +DDE+LKE+F ++G S KVM D
Sbjct: 177 KEREAELGARAKEF----------TNVYIKNFGEDMDDERLKEMFGKYGPALSVKVMTDD 226
Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
SG SKG GFV+F E+A +A+ +MNGK + K +YV A +K ER+ L+ +F QM+
Sbjct: 227 SGKSKGFGFVSFERHEDAQKAVDDMNGKDMNGKAIYVGRA-KKVERQTELKRKFEQMK 283
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 61/81 (75%), Gaps = 2/81 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA+A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 500 PLTA--SMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPE 557
Query: 555 ALKAKVAEAMEVLRSVAQQQA 575
+L++KV EA+ + A++ A
Sbjct: 558 SLRSKVDEAVVLQAHQAKEAA 578
>gi|169771151|ref|XP_001820045.1| polyadenylate-binding protein, cytoplasmic and nuclear [Aspergillus
oryzae RIB40]
gi|317144326|ref|XP_003189588.1| polyadenylate-binding protein, cytoplasmic and nuclear [Aspergillus
oryzae RIB40]
gi|121923334|sp|Q2UK72.1|PABP_ASPOR RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|83767904|dbj|BAE58043.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391872693|gb|EIT81794.1| polyadenylate-binding protein [Aspergillus oryzae 3.042]
Length = 765
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 184/324 (56%), Positives = 248/324 (76%), Gaps = 2/324 (0%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
+Q + SLYVG+LD +VT++ LY+LFS +GQV S+RVCRD TRRSLGY YVNY N AD
Sbjct: 44 SQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADG 103
Query: 85 ARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNI 144
RAL+ LN+T + K RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++FGNI
Sbjct: 104 ERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNI 163
Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV-- 202
LSCK+A D G SKG+GFV +E E+A NAI +NGML+NDK+VFVGH + K++R++
Sbjct: 164 LSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFE 223
Query: 203 AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDA 262
+K F NV++KN+D+ T+E+ +++F ++G ITSA + RD +GKS+ FGFVNF + A
Sbjct: 224 EMKANFTNVYIKNIDQDVTEEEFRELFEKFGEITSATLSRDQEGKSRGFGFVNFSTHESA 283
Query: 263 AKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDS 322
AV+ +N K+ ++ YVG+AQKK ERE+EL+ Q+E A E K+QG+NLY+KNL D
Sbjct: 284 QAAVDEMNEKEIRTQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLTDD 343
Query: 323 IDDEKLKELFSEFGTITSCKVMRD 346
+DDEKL+ELF +GTITS KVMRD
Sbjct: 344 VDDEKLRELFGPYGTITSAKVMRD 367
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 207/672 (30%), Positives = 304/672 (45%), Gaps = 158/672 (23%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ +LD + + L+D F+ G +LS +V +D S GYG+V+Y A A+
Sbjct: 138 NVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQD-EFGNSKGYGFVHYETAEAANNAIKH 196
Query: 91 LNFTPLNNKSIRIMY--SHRDPSIR----KSGTGNIFIKNLDKSIDHKALHDTFSSFGNI 144
+N LN+K + + + S +D + K+ N++IKN+D+ + + + F FG I
Sbjct: 197 VNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNIDQDVTEEEFRELFEKFGEI 256
Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET--- 201
S ++ D G+S+GFGFV F ESAQ A+D++N I ++++VG +K ERE
Sbjct: 257 TSATLSRDQEGKSRGFGFVNFSTHESAQAAVDEMNEKEIRTQKLYVGRAQKKHEREEELR 316
Query: 202 ---------VAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFG 252
A K + N++VKNL + DE L+++FG YGTITSA VMRD
Sbjct: 317 KQYEAARLEKASKYQGVNLYVKNLTDDVDDEKLRELFGPYGTITSAKVMRD--------- 367
Query: 253 FVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGL 312
N E D+E +A K++E+E + E+ ++ D G
Sbjct: 368 -TNIERTQTPE-----------SDKEKENKEATKENEKESSEAEKAEKTEEKPADS--GD 413
Query: 313 NLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEM 372
D + L G SKG GFV FS+P+EAS+A+ EM
Sbjct: 414 EKKEDKESKKADKKGL--------------------GKSKGFGFVCFSSPDEASKAVTEM 453
Query: 373 NGKMIVSKPLYVAVAQRKEERRARLQAQFSQ-------------------MRP-VAMGPS 412
N +M+ KPLYVA+AQRK+ RR++L+A M+P V GP
Sbjct: 454 NQRMVNGKPLYVALAQRKDVRRSQLEASIQARNTIRQQQAAAAAGMPQPYMQPAVFYGPG 513
Query: 413 VPPRMP------MYPPGP----SGL-------------GQQFLYGQAPPAIIPP--QMPP 447
+P +PP P +G+ GQQ G P +PP Q P
Sbjct: 514 QQGFIPGQRGGIAFPPQPGMVMAGIPGGRPGQYPGPFPGQQGGRGMGPNQQLPPNFQGIP 573
Query: 448 RG-------HAYRYPLGRNMQDFPFDMGAGSMLPVP--VDMGAG------------IPRR 486
G + YP G M F GAG VP +MG G +P +
Sbjct: 574 MGAMQGPVPNGMGYPQG--MAQVQFGRGAGGRGQVPGMPNMGQGMRGPGYGQGRGGVPVQ 631
Query: 487 ----------------DASVGQPMPITA---LSTALANASPEQQRTLLGESLYPLVEQLE 527
A G+P A + AL+ A P QQ+ +LGE+LYP ++ +
Sbjct: 632 QGQMRPGQGGRGQNAAQAPAGRPEEAVAGGLTAQALSAAPPPQQKQMLGEALYPKIQAQQ 691
Query: 528 RDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVL---------RSVAQQQANNP 578
+ A K+TGMLLEM+ TE+L LLE EAL+AKV EA+ V S A +A P
Sbjct: 692 PELAGKITGMLLEMENTELLSLLEDEEALRAKVDEALNVYDEYMKNKGGESEATGEAAKP 751
Query: 579 ADQLASLSLNEN 590
+ S EN
Sbjct: 752 KEAAKETSTEEN 763
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/300 (34%), Positives = 162/300 (54%), Gaps = 21/300 (7%)
Query: 110 PSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENK 168
P+ + + ++++ LD S+ L++ FSS G + S ++ D + +S G+ +V + N
Sbjct: 41 PNASQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNT 100
Query: 169 ESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKI 228
+ A++ LN LI K + +R+ KT NVF+KNLD + ++ L
Sbjct: 101 ADGERALEDLNYTLIKGKPCRI----MWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDT 156
Query: 229 FGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKS 288
F +G I S V +D G SK +GFV++E A+ A A++ +NG +D++ +VG K
Sbjct: 157 FAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKK 216
Query: 289 ERE---QELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMR 345
+R+ +E+K F N+YIKN+ + +E+ +ELF +FG ITS + R
Sbjct: 217 DRQSKFEEMKANF-------------TNVYIKNIDQDVTEEEFRELFEKFGEITSATLSR 263
Query: 346 DPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
D G S+G GFV FST E A A+ EMN K I ++ LYV AQ+K ER L+ Q+ R
Sbjct: 264 DQEGKSRGFGFVNFSTHESAQAAVDEMNEKEIRTQKLYVGRAQKKHEREEELRKQYEAAR 323
>gi|238486326|ref|XP_002374401.1| polyadenylate-binding protein [Aspergillus flavus NRRL3357]
gi|220699280|gb|EED55619.1| polyadenylate-binding protein [Aspergillus flavus NRRL3357]
Length = 713
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 183/320 (57%), Positives = 246/320 (76%), Gaps = 2/320 (0%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVG+LD +VT++ LY+LFS +GQV S+RVCRD TRRSLGY YVNY N AD RAL
Sbjct: 48 SASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERAL 107
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LN+T + K RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++FGNILSCK
Sbjct: 108 EDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNILSCK 167
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKT 206
+A D G SKG+GFV +E E+A NAI +NGML+NDK+VFVGH + K++R++ +K
Sbjct: 168 VAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKA 227
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
F NV++KN+D+ T+E+ +++F ++G ITSA + RD +GKS+ FGFVNF + A AV
Sbjct: 228 NFTNVYIKNIDQDVTEEEFRELFEKFGEITSATLSRDQEGKSRGFGFVNFSTHESAQAAV 287
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
+ +N K+ ++ YVG+AQKK ERE+EL+ Q+E A E K+QG+NLY+KNL D +DDE
Sbjct: 288 DEMNEKEIRTQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLTDDVDDE 347
Query: 327 KLKELFSEFGTITSCKVMRD 346
KL+ELF +GTITS KVMRD
Sbjct: 348 KLRELFGPYGTITSAKVMRD 367
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 189/622 (30%), Positives = 282/622 (45%), Gaps = 149/622 (23%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ +LD + + L+D F+ G +LS +V +D S GYG+V+Y A A+
Sbjct: 138 NVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQD-EFGNSKGYGFVHYETAEAANNAIKH 196
Query: 91 LNFTPLNNKSIRIMY--SHRDPSIR----KSGTGNIFIKNLDKSIDHKALHDTFSSFGNI 144
+N LN+K + + + S +D + K+ N++IKN+D+ + + + F FG I
Sbjct: 197 VNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNIDQDVTEEEFRELFEKFGEI 256
Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET--- 201
S ++ D G+S+GFGFV F ESAQ A+D++N I ++++VG +K ERE
Sbjct: 257 TSATLSRDQEGKSRGFGFVNFSTHESAQAAVDEMNEKEIRTQKLYVGRAQKKHEREEELR 316
Query: 202 ---------VAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFG 252
A K + N++VKNL + DE L+++FG YGTITSA VMRD
Sbjct: 317 KQYEAARLEKASKYQGVNLYVKNLTDDVDDEKLRELFGPYGTITSAKVMRD--------- 367
Query: 253 FVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGL 312
N E D+E +A K++E+E + E+ ++ D G
Sbjct: 368 -TNIERTQTPE-----------SDKEKENKEATKENEKESSEAEKAEKTEEKPADS--GD 413
Query: 313 NLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEM 372
D + L G SKG GFV FS+P+EAS+A+ EM
Sbjct: 414 EKKEDKESKKADKKGL--------------------GKSKGFGFVCFSSPDEASKAVTEM 453
Query: 373 NGKMIVSKPLYVAVAQRKEERRARLQAQFSQ-------------------MRP-VAMGPS 412
N +M+ KPLYVA+AQRK+ RR++L+A M+P V GP
Sbjct: 454 NQRMVNGKPLYVALAQRKDVRRSQLEASIQARNTIRQQQAAAAAGMPQPYMQPAVFYGPG 513
Query: 413 VPPRMP------MYPPGP----SGL-------------GQQFLYGQAPPAIIPP--QMPP 447
+P +PP P +G+ GQQ G P +PP Q P
Sbjct: 514 QQGFIPGQRGGIAFPPQPGMVMAGIPGGRPGQYPGPFPGQQGGRGMGPNQQLPPNFQGIP 573
Query: 448 RG-------HAYRYPLGRNMQDFPFDMGAGSMLPVP--VDMGAG------------IPRR 486
G + YP G M F GAG VP +MG G +P +
Sbjct: 574 MGAMQGPVPNGMGYPQG--MAQVQFGRGAGGRGQVPGMPNMGQGMRGPGYGQGRGGVPVQ 631
Query: 487 ----------------DASVGQPMPITA---LSTALANASPEQQRTLLGESLYPLVEQLE 527
A G+P A + AL+ A P QQ+ +LGE+LYP ++ +
Sbjct: 632 QGQMRPGQGGRGQNAAQAPAGRPEEAVAGGLTAQALSAAPPPQQKQMLGEALYPKIQAQQ 691
Query: 528 RDAAAKVTGMLLEMDQTEVLHL 549
+ A K+TGMLLEM+ TE+L L
Sbjct: 692 PELAGKITGMLLEMENTELLSL 713
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/300 (34%), Positives = 162/300 (54%), Gaps = 21/300 (7%)
Query: 110 PSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENK 168
P+ + + ++++ LD S+ L++ FSS G + S ++ D + +S G+ +V + N
Sbjct: 41 PNASQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNT 100
Query: 169 ESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKI 228
+ A++ LN LI K + +R+ KT NVF+KNLD + ++ L
Sbjct: 101 ADGERALEDLNYTLIKGKPCRI----MWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDT 156
Query: 229 FGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKS 288
F +G I S V +D G SK +GFV++E A+ A A++ +NG +D++ +VG K
Sbjct: 157 FAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKK 216
Query: 289 ERE---QELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMR 345
+R+ +E+K F N+YIKN+ + +E+ +ELF +FG ITS + R
Sbjct: 217 DRQSKFEEMKANF-------------TNVYIKNIDQDVTEEEFRELFEKFGEITSATLSR 263
Query: 346 DPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
D G S+G GFV FST E A A+ EMN K I ++ LYV AQ+K ER L+ Q+ R
Sbjct: 264 DQEGKSRGFGFVNFSTHESAQAAVDEMNEKEIRTQKLYVGRAQKKHEREEELRKQYEAAR 323
>gi|147838149|emb|CAN74140.1| hypothetical protein VITISV_008914 [Vitis vinifera]
Length = 544
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 214/447 (47%), Positives = 293/447 (65%), Gaps = 33/447 (7%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL ++TD L+D FS+ + SVR+CRD S+ RSL YGYVN+ +P DA+ A++
Sbjct: 13 SLYVGDLHPDITDGLLFDAFSEFKSLASVRICRDSSSGRSLCYGYVNFISPQDASHAIEA 72
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIK--------------------NLDKSID 130
N T L+ K IR+M+SHRDP R+SG GN+F+K NL SID
Sbjct: 73 KNHTMLHGKVIRVMWSHRDPDARRSGIGNVFVKVYLFAVTSIIDAELYFLVCLNLSDSID 132
Query: 131 HKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFV 190
+ L F FGNILSCK+ G+SKG+GFVQFE++E A AI+KLNG +I+ KQ++
Sbjct: 133 NVRLQAMFQKFGNILSCKVVVTEDGKSKGYGFVQFESEEYANAAIEKLNGFIIDGKQIYA 192
Query: 191 GHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKC 250
G F+RK +R K+ N+++KNLD T+E L++ F E+G I S V+ +D +G S+
Sbjct: 193 GKFVRKTDRVLPNPDAKYTNLYIKNLDPDVTEEALREKFFEFGKIASLVISKDENGMSRG 252
Query: 251 FGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQ 310
FGFVNFE+ +DA +A+EALNG + + YV +AQKK+EREQ L+ QFE+ E + K++
Sbjct: 253 FGFVNFESPEDAKRALEALNGLQLGSKVLYVARAQKKAEREQLLRRQFEEKRNEQILKYR 312
Query: 311 GLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALA 370
G N+Y+KN+ D+++D+ L+E FS G ITS K+MRD GISKG GFV FSTP+EAS+A+
Sbjct: 313 GSNVYVKNIDDNVNDDDLREHFSVCGKITSAKLMRDQKGISKGFGFVCFSTPDEASKAVN 372
Query: 371 EMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQ 430
+G M KPLYVA+AQRKE+R+A+LQ ++Q GPS P YPP
Sbjct: 373 TFHGYMFHRKPLYVAIAQRKEDRQAQLQLHYAQRMAGLAGPSTPVIPGGYPP-------- 424
Query: 431 FLYGQAPPAIIPPQMPPRGHAYRYPLG 457
LY APP +IPP+ +G Y+ PLG
Sbjct: 425 -LYYTAPPGVIPPR---QGLMYQ-PLG 446
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 101/187 (54%), Gaps = 17/187 (9%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
T+LY+ +LD +VT+ L + F + G++ S+ + +D S G+G+VN+ +P DA RAL+
Sbjct: 211 TNLYIKNLDPDVTEEALREKFFEFGKIASLVISKD-ENGMSRGFGFVNFESPEDAKRALE 269
Query: 90 VLNFTPLNNKSIRIMYSH----------------RDPSIRKSGTGNIFIKNLDKSIDHKA 133
LN L +K + + + R+ I K N+++KN+D +++
Sbjct: 270 ALNGLQLGSKVLYVARAQKKAEREQLLRRQFEEKRNEQILKYRGSNVYVKNIDDNVNDDD 329
Query: 134 LHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHF 193
L + FS G I S K+ D G SKGFGFV F + A A++ +G + + K ++V
Sbjct: 330 LREHFSVCGKITSAKLMRDQKGISKGFGFVCFSTPDEASKAVNTFHGYMFHRKPLYVAIA 389
Query: 194 LRKQERE 200
RK++R+
Sbjct: 390 QRKEDRQ 396
>gi|302658195|ref|XP_003020804.1| hypothetical protein TRV_05080 [Trichophyton verrucosum HKI 0517]
gi|291184669|gb|EFE40186.1| hypothetical protein TRV_05080 [Trichophyton verrucosum HKI 0517]
Length = 816
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 190/335 (56%), Positives = 256/335 (76%), Gaps = 4/335 (1%)
Query: 15 PNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYG 74
P+G +A A+ +Q + SLYVG+LD +VT++ LY+LFS +GQV S+RVCRD TRRSLGY
Sbjct: 60 PSGTSAPAT-SQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYA 118
Query: 75 YVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKAL 134
YVNY N AD RAL+ LN+T + + RIM+S RDP++RK+G GN+FIKNLD +ID+KAL
Sbjct: 119 YVNYNNTADGERALEDLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKAL 178
Query: 135 HDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFL 194
HDTF++FGNILSCK+A D G SKG+GFV +E E+A NAI +NGML+N+K+VFVGH +
Sbjct: 179 HDTFAAFGNILSCKVAQDEYGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHI 238
Query: 195 RKQERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGD-GKSKCF 251
K++R++ +K F N++VKN+++ TDE+ + +F +YG ITSA + RD + GKS+ F
Sbjct: 239 AKKDRQSKFEEMKANFTNIYVKNVEQDVTDEEFRGLFEKYGEITSATLSRDNETGKSRGF 298
Query: 252 GFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQG 311
GFVNF + + A+ AVEALN + ++ YVG+AQKK ERE+EL+ Q+E A E K+QG
Sbjct: 299 GFVNFSDHEAASAAVEALNEYELKGQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQG 358
Query: 312 LNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRD 346
+NLYIKNL D IDDEKL+ELFS +G ITS KVMR+
Sbjct: 359 VNLYIKNLSDDIDDEKLRELFSSYGNITSAKVMRE 393
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 112/388 (28%), Positives = 197/388 (50%), Gaps = 67/388 (17%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ +LD + + L+D F+ G +LS +V +D S GYG+V+Y A A+
Sbjct: 163 NVFIKNLDTAIDNKALHDTFAAFGNILSCKVAQD-EYGNSKGYGFVHYETAEAATNAIKH 221
Query: 91 LNFTPLNNKSIRIMY--SHRDPSIR----KSGTGNIFIKNLDKSIDHKALHDTFSSFGNI 144
+N LN K + + + + +D + K+ NI++KN+++ + + F +G I
Sbjct: 222 VNGMLLNEKKVFVGHHIAKKDRQSKFEEMKANFTNIYVKNVEQDVTDEEFRGLFEKYGEI 281
Query: 145 LSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET-- 201
S ++ D +G+S+GFGFV F + E+A A++ LN + ++++VG +K ERE
Sbjct: 282 TSATLSRDNETGKSRGFGFVNFSDHEAASAAVEALNEYELKGQKLYVGRAQKKHEREEEL 341
Query: 202 ----------VAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG--DGKSK 249
A K + N+++KNL + DE L+++F YG ITSA VMR+ D ++
Sbjct: 342 RKQYEAARIEKASKYQGVNLYIKNLSDDIDDEKLRELFSSYGNITSAKVMREAIVDVPAE 401
Query: 250 CFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKF 309
++ + + + G K +++ +++ KS+ E++ +G+ E A E
Sbjct: 402 TE-----KDKEADKEKAKKETGDKSEEKGESKSESEDKSKSEEKTEGKTESAKPEK---- 452
Query: 310 QGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRAL 369
K+LG S KG GFV FS P+EAS+A+
Sbjct: 453 -------KHLGKS-----------------------------KGFGFVCFSNPDEASKAV 476
Query: 370 AEMNGKMIVSKPLYVAVAQRKEERRARL 397
EMN +M+ KPLYVA+AQRK+ R++++
Sbjct: 477 TEMNQRMVHGKPLYVALAQRKDVRKSQV 504
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 94/301 (31%), Positives = 159/301 (52%), Gaps = 22/301 (7%)
Query: 110 PSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENK 168
P+ + + ++++ LD S+ L++ FSS G + S ++ D + +S G+ +V + N
Sbjct: 66 PATSQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNT 125
Query: 169 ESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKI 228
+ A++ LN LI + + +R+ KT NVF+KNLD + ++ L
Sbjct: 126 ADGERALEDLNYTLIKGRPCRI----MWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDT 181
Query: 229 FGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKS 288
F +G I S V +D G SK +GFV++E A+ A A++ +NG ++++ +VG K
Sbjct: 182 FAAFGNILSCKVAQDEYGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIAKK 241
Query: 289 ERE---QELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMR 345
+R+ +E+K F N+Y+KN+ + DE+ + LF ++G ITS + R
Sbjct: 242 DRQSKFEEMKANF-------------TNIYVKNVEQDVTDEEFRGLFEKYGEITSATLSR 288
Query: 346 D-PSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQM 404
D +G S+G GFV FS E AS A+ +N + + LYV AQ+K ER L+ Q+
Sbjct: 289 DNETGKSRGFGFVNFSDHEAASAAVEALNEYELKGQKLYVGRAQKKHEREEELRKQYEAA 348
Query: 405 R 405
R
Sbjct: 349 R 349
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 64/102 (62%), Gaps = 6/102 (5%)
Query: 483 IPRRDASVGQPMPITALSTALANASPE-QQRTLLGESLYPLVEQLERDAAAKVTGMLLEM 541
IPR +A+ +++ A+ NA+PE QQ+ +LGE++YP + + + A K+TGMLLEM
Sbjct: 707 IPRDEAAGS-----GSINLAVFNAAPEPQQKQMLGEAIYPKILAQQPELAGKITGMLLEM 761
Query: 542 DQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNPADQLA 583
D +E++ L++ AL+AKV EA+ V + + + P + A
Sbjct: 762 DNSELIGLVDDDVALRAKVDEALTVYDEYVKNKNDAPTGEAA 803
>gi|323448247|gb|EGB04148.1| hypothetical protein AURANDRAFT_70409 [Aureococcus anophagefferens]
Length = 616
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/437 (47%), Positives = 295/437 (67%), Gaps = 39/437 (8%)
Query: 27 FLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAAR 86
F + SLYVGDL + ++ L+++F+ VG V S+RVCRD TRRSLGY YVN+ N +DA R
Sbjct: 10 FHSASLYVGDLATDASEGLLFEIFNTVGPVASIRVCRDAVTRRSLGYAYVNFHNVSDAER 69
Query: 87 ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
ALD +N+T + +K RIM+S RDP++RKSG GN+F+KNLD SIDHKAL DTFS FGNILS
Sbjct: 70 ALDTMNYTLIKSKPCRIMWSQRDPTLRKSGVGNVFVKNLDSSIDHKALFDTFSLFGNILS 129
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKT 206
CK+ATD +G+S+G+G+V +E++++A +AI+K+N M I DK+V+VGHF+R+ ER ++
Sbjct: 130 CKVATDEAGRSQGYGYVHYESEDAATDAINKINSMTICDKEVYVGHFVRRTERSG---QS 186
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
+ N++VKN + L+K F + DG + FG+VNFE D A A+
Sbjct: 187 DWTNLYVKNFPADWDEATLRKAFEMFAA---------ADGSA--FGWVNFEGHDAAVAAM 235
Query: 267 EALNGKK-----------FDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLY 315
+ALNG +VG+AQKK ERE+ELK +F+ A E + K+QG+NL+
Sbjct: 236 DALNGASELPGHAGTAPITLKSPLFVGRAQKKVERERELKAKFDAAKIERIKKYQGVNLF 295
Query: 316 IKNLGDSIDDEKLKELFSEFGTITSCKVMRDP-SGISKGSGFVAFSTPEEASRALAEMNG 374
+KNL D++DD++L+E F+E+GTITS +VMR+P +G S+G GFV FS+PEEA++A+ EMN
Sbjct: 296 VKNLDDALDDDQLREHFTEYGTITSARVMREPATGTSRGFGFVCFSSPEEAAKAVTEMNN 355
Query: 375 KMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRM-PMYPPGPSGLGQQFLY 433
K+++ KP++VA+AQRKE RRA+L+AQ +Q R+ P + P G +Y
Sbjct: 356 KLVLGKPIFVALAQRKEVRRAQLEAQHAQ------------RLHPAHLSAPYGAAMPIMY 403
Query: 434 GQAPPAIIPPQMPPRGH 450
P P M P+GH
Sbjct: 404 AAGAPGGHPMGMAPQGH 420
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 61/83 (73%)
Query: 501 TALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKV 560
+ALANASP Q+ ++GE LYPL+ + + A K+TGMLLEMD +E+LHLLESP+AL+ KV
Sbjct: 534 SALANASPTLQKNMIGERLYPLIHHSQPELAGKITGMLLEMDNSELLHLLESPDALRMKV 593
Query: 561 AEAMEVLRSVAQQQANNPADQLA 583
AEA+EVL+ Q P ++ A
Sbjct: 594 AEALEVLKQHQAQLQQVPREEAA 616
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 59/107 (55%)
Query: 2 AQIQVQHQAQMSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRV 61
AQ +V+ + ++ A ++ +L+V +LD + D QL + F++ G + S RV
Sbjct: 264 AQKKVERERELKAKFDAAKIERIKKYQGVNLFVKNLDDALDDDQLREHFTEYGTITSARV 323
Query: 62 CRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHR 108
R+ +T S G+G+V +++P +AA+A+ +N + K I + + R
Sbjct: 324 MREPATGTSRGFGFVCFSSPEEAAKAVTEMNNKLVLGKPIFVALAQR 370
>gi|302500992|ref|XP_003012489.1| hypothetical protein ARB_01449 [Arthroderma benhamiae CBS 112371]
gi|291176047|gb|EFE31849.1| hypothetical protein ARB_01449 [Arthroderma benhamiae CBS 112371]
Length = 801
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 190/335 (56%), Positives = 255/335 (76%), Gaps = 4/335 (1%)
Query: 15 PNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYG 74
P+G A A+ +Q + SLYVG+LD +VT++ LY+LFS +GQV S+RVCRD TRRSLGY
Sbjct: 44 PSGTTAPAT-SQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYA 102
Query: 75 YVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKAL 134
YVNY N AD RAL+ LN+T + + RIM+S RDP++RK+G GN+FIKNLD +ID+KAL
Sbjct: 103 YVNYNNTADGERALEDLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKAL 162
Query: 135 HDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFL 194
HDTF++FGNILSCK+A D G SKG+GFV +E E+A NAI +NGML+N+K+VFVGH +
Sbjct: 163 HDTFAAFGNILSCKVAQDEYGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHI 222
Query: 195 RKQERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGD-GKSKCF 251
K++R++ +K F N++VKN+++ TDE+ + +F +YG ITSA + RD + GKS+ F
Sbjct: 223 AKKDRQSKFEEMKANFTNIYVKNVEQDVTDEEFRGLFEKYGEITSATLSRDNETGKSRGF 282
Query: 252 GFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQG 311
GFVNF + + A+ AVEALN + ++ YVG+AQKK ERE+EL+ Q+E A E K+QG
Sbjct: 283 GFVNFSDHEAASAAVEALNEYELKGQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQG 342
Query: 312 LNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRD 346
+NLYIKNL D IDDEKL+ELFS +G ITS KVMR+
Sbjct: 343 VNLYIKNLSDDIDDEKLRELFSSYGNITSAKVMRE 377
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 152/517 (29%), Positives = 236/517 (45%), Gaps = 111/517 (21%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ +LD + + L+D F+ G +LS +V +D S GYG+V+Y A A+
Sbjct: 147 NVFIKNLDTAIDNKALHDTFAAFGNILSCKVAQD-EYGNSKGYGFVHYETAEAATNAIKH 205
Query: 91 LNFTPLNNKSIRIMY--SHRDPSIR----KSGTGNIFIKNLDKSIDHKALHDTFSSFGNI 144
+N LN K + + + + +D + K+ NI++KN+++ + + F +G I
Sbjct: 206 VNGMLLNEKKVFVGHHIAKKDRQSKFEEMKANFTNIYVKNVEQDVTDEEFRGLFEKYGEI 265
Query: 145 LSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET-- 201
S ++ D +G+S+GFGFV F + E+A A++ LN + ++++VG +K ERE
Sbjct: 266 TSATLSRDNETGKSRGFGFVNFSDHEAASAAVEALNEYELKGQKLYVGRAQKKHEREEEL 325
Query: 202 ----------VAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCF 251
A K + N+++KNL + DE L+++F YG ITSA VMR+
Sbjct: 326 RKQYEAARIEKASKYQGVNLYIKNLSDDIDDEKLRELFSSYGNITSAKVMRE------AI 379
Query: 252 GFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQG 311
V E D E + D E K + KSE E + K
Sbjct: 380 VDVPAETEKDKEADKEKAKKEGGDKSEE---KGESKSESEDKSK---------------- 420
Query: 312 LNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAE 371
+EK + G S K + G SKG GFV FS P+EAS+A+ E
Sbjct: 421 ------------SEEKTE------GKTESTKPEKKHLGKSKGFGFVCFSNPDEASKAVTE 462
Query: 372 MNGKMIVSKPLYVAVAQRKEERRAR--------LQAQFS-----------------QMRP 406
MN +M+ KPLYVA+AQRK+ R+++ +++QF+ Q
Sbjct: 463 MNQRMVHGKPLYVALAQRKDVRKSQVSTKVIHLIRSQFTNIYQLEASIQARNTIRQQQVA 522
Query: 407 VAMG---PSVPPRMPMYPPGPSGL------GQQFLYGQAPPAIIPPQMPPRGHAYRYPL- 456
A G P + P + PG G G QF GQA ++ P M P G ++P
Sbjct: 523 AAAGMAQPFMQPAVFYGAPGQQGFLPGAQRGMQFA-GQA--GMVMPGM-PGGRPGQFPQF 578
Query: 457 -----GRNM---QDFPFDMGAGSM-LPVPVDMGAGIP 484
GR M Q P + G GS +P+ GAGIP
Sbjct: 579 PGQQGGRGMNPNQPLPPNFGMGSQGIPMGAMQGAGIP 615
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/301 (31%), Positives = 159/301 (52%), Gaps = 22/301 (7%)
Query: 110 PSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENK 168
P+ + + ++++ LD S+ L++ FSS G + S ++ D + +S G+ +V + N
Sbjct: 50 PATSQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNT 109
Query: 169 ESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKI 228
+ A++ LN LI + + +R+ KT NVF+KNLD + ++ L
Sbjct: 110 ADGERALEDLNYTLIKGRPCRI----MWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDT 165
Query: 229 FGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKS 288
F +G I S V +D G SK +GFV++E A+ A A++ +NG ++++ +VG K
Sbjct: 166 FAAFGNILSCKVAQDEYGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIAKK 225
Query: 289 ERE---QELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMR 345
+R+ +E+K F N+Y+KN+ + DE+ + LF ++G ITS + R
Sbjct: 226 DRQSKFEEMKANF-------------TNIYVKNVEQDVTDEEFRGLFEKYGEITSATLSR 272
Query: 346 D-PSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQM 404
D +G S+G GFV FS E AS A+ +N + + LYV AQ+K ER L+ Q+
Sbjct: 273 DNETGKSRGFGFVNFSDHEAASAAVEALNEYELKGQKLYVGRAQKKHEREEELRKQYEAA 332
Query: 405 R 405
R
Sbjct: 333 R 333
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 64/102 (62%), Gaps = 6/102 (5%)
Query: 483 IPRRDASVGQPMPITALSTALANASPE-QQRTLLGESLYPLVEQLERDAAAKVTGMLLEM 541
IPR +A+ +++ A+ NA+PE QQ+ +LGE++YP + + + A K+TGMLLEM
Sbjct: 692 IPRDEAAGS-----GSINLAVFNAAPEPQQKQMLGEAIYPKILAQQPELAGKITGMLLEM 746
Query: 542 DQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNPADQLA 583
D +E++ L++ AL+AKV EA+ V + + + P + A
Sbjct: 747 DNSELIGLVDDDVALRAKVDEALTVYDEYVKNKNDAPTGEAA 788
>gi|367030019|ref|XP_003664293.1| hypothetical protein MYCTH_2306966 [Myceliophthora thermophila ATCC
42464]
gi|347011563|gb|AEO59048.1| hypothetical protein MYCTH_2306966 [Myceliophthora thermophila ATCC
42464]
Length = 787
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 181/320 (56%), Positives = 250/320 (78%), Gaps = 2/320 (0%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVG+LD +VT++ L++LFSQ+G V S+RVCRD TRRSLGY YVNY + AD +AL
Sbjct: 63 SASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNSTADGEKAL 122
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LN+T + + RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++FGNILSCK
Sbjct: 123 EELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILSCK 182
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKT 206
+A D +G SKG+GFV +E E+A AI +NGML+N+K+V+VG+ + K++R++ +K
Sbjct: 183 VAQDENGNSKGYGFVHYETDEAAAQAIKHVNGMLLNEKKVYVGYHIPKKDRQSKFEEMKA 242
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
+ NV+VKN++ T+E+ +++F +YG +TS+ + RD +GKS+ FGFVNF D AAKAV
Sbjct: 243 NYTNVYVKNINLEVTEEEFRELFSKYGEVTSSTLARDQEGKSRGFGFVNFSTHDSAAKAV 302
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
E LNGK+F +E YVG+AQKK ERE+EL+ +E A E +K+QG+NLYIKNL D IDD+
Sbjct: 303 EELNGKEFRGQELYVGRAQKKHEREEELRKSYEAARAEKANKYQGVNLYIKNLADDIDDD 362
Query: 327 KLKELFSEFGTITSCKVMRD 346
KL+++FSEFG ITS KVMRD
Sbjct: 363 KLRQMFSEFGPITSAKVMRD 382
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 94/290 (32%), Positives = 163/290 (56%), Gaps = 15/290 (5%)
Query: 117 TGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAI 175
+ ++++ LD S+ L + FS G++ S ++ D + +S G+ +V + + + A+
Sbjct: 63 SASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNSTADGEKAL 122
Query: 176 DKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTI 235
++LN LI + + +R+ KT NVF+KNLD + ++ L F +G I
Sbjct: 123 EELNYTLIKGRPCRI----MWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNI 178
Query: 236 TSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELK 295
S V +D +G SK +GFV++E + AA+A++ +NG ++++ YVG K +R+
Sbjct: 179 LSCKVAQDENGNSKGYGFVHYETDEAAAQAIKHVNGMLLNEKKVYVGYHIPKKDRQS--- 235
Query: 296 GQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSG 355
+FE+ MK N+Y+KN+ + +E+ +ELFS++G +TS + RD G S+G G
Sbjct: 236 -KFEE-MKANY-----TNVYVKNINLEVTEEEFRELFSKYGEVTSSTLARDQEGKSRGFG 288
Query: 356 FVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
FV FST + A++A+ E+NGK + LYV AQ+K ER L+ + R
Sbjct: 289 FVNFSTHDSAAKAVEELNGKEFRGQELYVGRAQKKHEREEELRKSYEAAR 338
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 99/340 (29%), Positives = 162/340 (47%), Gaps = 72/340 (21%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ +LD + + L+D F+ G +LS +V +D S GYG+V+Y AA+A+
Sbjct: 153 NVFIKNLDTAIDNKALHDTFAAFGNILSCKVAQD-ENGNSKGYGFVHYETDEAAAQAIKH 211
Query: 91 LNFTPLNNKSIRIMYS--HRDPSIR----KSGTGNIFIKNLDKSIDHKALHDTFSSFGNI 144
+N LN K + + Y +D + K+ N+++KN++ + + + FS +G +
Sbjct: 212 VNGMLLNEKKVYVGYHIPKKDRQSKFEEMKANYTNVYVKNINLEVTEEEFRELFSKYGEV 271
Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERE---- 200
S +A D G+S+GFGFV F +SA A+++LNG ++++VG +K ERE
Sbjct: 272 TSSTLARDQEGKSRGFGFVNFSTHDSAAKAVEELNGKEFRGQELYVGRAQKKHEREEELR 331
Query: 201 ---TVAIKTKFN-----NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-------- 244
A K N N+++KNL + D+ L+++F E+G ITSA VMRD
Sbjct: 332 KSYEAARAEKANKYQGVNLYIKNLADDIDDDKLRQMFSEFGPITSAKVMRDNPPDHHHSA 391
Query: 245 --DGK-------------------------------------------SKCFGFVNFENA 259
+GK SK FGFV F N
Sbjct: 392 DKEGKDKENKKEGEQEAKKEGKEEGEKDGEAKEGEKKTEKKPERKLGKSKGFGFVCFSNP 451
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFE 299
DDA KAV +N + + + YV AQ+K R+ +L+ +
Sbjct: 452 DDATKAVAEMNQRMVEGKPLYVALAQRKDVRKSQLEASIQ 491
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 64/111 (57%), Gaps = 15/111 (13%)
Query: 349 GISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVA 408
G SKG GFV FS P++A++A+AEMN +M+ KPLYVA+AQRK+ R+++L+A +
Sbjct: 438 GKSKGFGFVCFSNPDDATKAVAEMNQRMVEGKPLYVALAQRKDVRKSQLEASIQARNQLR 497
Query: 409 MGPSVPPRMPMYPPGPSGLGQQFLYGQAP----PAIIPPQMPPRGHAYRYP 455
M + +GL QQ++ QAP P P MPP G +P
Sbjct: 498 MQQAA---------AQAGLPQQYM--QAPIYYAPGQQPNFMPPGGRGMPFP 537
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Query: 500 STALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAK 559
S A ++P+QQ+ +LGE+L+P ++ L+ + A K+TGMLLEMD E+++LLE AL AK
Sbjct: 685 SQLAATSNPQQQKQILGENLFPKIQALQPELAGKITGMLLEMDNNELVNLLEDETALVAK 744
Query: 560 VAEAMEVL-RSVAQQQA 575
V EAM V V QQA
Sbjct: 745 VNEAMAVYDEYVKSQQA 761
>gi|255940906|ref|XP_002561222.1| Pc16g09030 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211585845|emb|CAP93573.1| Pc16g09030 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 734
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 185/331 (55%), Positives = 247/331 (74%), Gaps = 2/331 (0%)
Query: 18 VAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVN 77
A A+ NQ + SLYVG+LD +VT++ LY+LFS +GQV S+RVCRD TRRSLGY YVN
Sbjct: 33 AAGDAANNQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVN 92
Query: 78 YANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDT 137
Y N AD RAL+ LN+T + K RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDT
Sbjct: 93 YNNTADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDNAIDNKALHDT 152
Query: 138 FSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQ 197
F++FGNILSCK+A D SKG+GFV +E E+A NAI +NGML+NDK+VFVGH + K+
Sbjct: 153 FAAFGNILSCKVAQDEFANSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKK 212
Query: 198 ERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVN 255
+R++ +K F N+++KN+D TD++ + +F +G ITSA + D DGKS+ FGFVN
Sbjct: 213 DRQSKFEEMKANFTNIYIKNIDLEITDDEFRTMFEAFGEITSATLSHDQDGKSRGFGFVN 272
Query: 256 FENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLY 315
+ N + A AV +N K+ ++ YVG+AQKK ERE+EL+ Q+E A E K+QG+NLY
Sbjct: 273 YANHESAEAAVAEMNEKEVKSQKLYVGRAQKKHEREEELRKQYEAARMEKASKYQGVNLY 332
Query: 316 IKNLGDSIDDEKLKELFSEFGTITSCKVMRD 346
+KNL D IDDEKL++LF+ +GTITS KVMRD
Sbjct: 333 VKNLTDDIDDEKLRDLFTPYGTITSAKVMRD 363
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/293 (32%), Positives = 155/293 (52%), Gaps = 21/293 (7%)
Query: 117 TGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAI 175
+ ++++ LD S+ L++ FSS G + S ++ D + +S G+ +V + N + A+
Sbjct: 44 SASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERAL 103
Query: 176 DKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTI 235
+ LN LI K + +R+ KT NVF+KNLD + ++ L F +G I
Sbjct: 104 EDLNYTLIKGKPCRI----MWSQRDPALRKTGQGNVFIKNLDNAIDNKALHDTFAAFGNI 159
Query: 236 TSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSERE---Q 292
S V +D SK +GFV++E A+ A A++ +NG +D++ +VG K +R+ +
Sbjct: 160 LSCKVAQDEFANSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFE 219
Query: 293 ELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISK 352
E+K F N+YIKN+ I D++ + +F FG ITS + D G S+
Sbjct: 220 EMKANF-------------TNIYIKNIDLEITDDEFRTMFEAFGEITSATLSHDQDGKSR 266
Query: 353 GSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
G GFV ++ E A A+AEMN K + S+ LYV AQ+K ER L+ Q+ R
Sbjct: 267 GFGFVNYANHESAEAAVAEMNEKEVKSQKLYVGRAQKKHEREEELRKQYEAAR 319
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 102/285 (35%), Positives = 136/285 (47%), Gaps = 73/285 (25%)
Query: 349 GISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVA 408
G SKG GFV FS+P+EAS+A+ EMN +M+ KPLYVA+AQRK+ RR++L+A +
Sbjct: 424 GKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKPLYVALAQRKDVRRSQLEASIQARNTIR 483
Query: 409 MGPSVP----PRMPMYPPGPSGLGQQFLY--GQ------APPAIIP-PQMPPRGHAYRYP 455
+ P+ M P G GQQ GQ AP +P P MP G +YP
Sbjct: 484 QQQAAAAAGMPQPFMQPAVFYGAGQQGFMPPGQRGGMPFAPQGGMPMPNMP--GGRPQYP 541
Query: 456 ---------------LGRNMQDFPFDMGAGSMLP----------------------VPVD 478
L N Q P M A +P +P++
Sbjct: 542 GPFPQGGRGMPPNQQLPPNFQGMPMGMQAPGGIPNGMGYPMPQAFGRGGGGRGVPGMPMN 601
Query: 479 M---------------GAGIPRRDASVGQPM--PITALSTALANASPEQQRTLLGESLYP 521
M G G P A GQP P +A + AL A P QQ+ +LGE+LYP
Sbjct: 602 MRGGPGFGRGGPQMGRGRGQP---APGGQPAGEPASA-NQALLAAPPAQQKQMLGEALYP 657
Query: 522 LVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEV 566
++ + + A K+TGMLLEMD E+L LL+ EAL+ KV EA+ V
Sbjct: 658 KIQAQQPELAGKITGMLLEMDNAELLGLLDDEEALRGKVDEALNV 702
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%)
Query: 246 GKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFE 299
GKSK FGFV F + D+A+KAV +N + + + YV AQ+K R +L+ +
Sbjct: 424 GKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKPLYVALAQRKDVRRSQLEASIQ 477
>gi|356572504|ref|XP_003554408.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
[Glycine max]
Length = 636
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/418 (48%), Positives = 286/418 (68%), Gaps = 11/418 (2%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL +V+DS L D FS+ + SVRVC+D ST +SL YGY+N+ +P DA RA+++
Sbjct: 13 SLYVGDLHPDVSDSHLVDAFSEFKSLASVRVCKDSSTGKSLCYGYLNFVSPQDAIRAIEL 72
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
N + LN K++R+M+S RDP RKS GN+F+KNL +SID+ L D F +GNILS K+
Sbjct: 73 KNNSTLNGKAMRVMWSRRDPDARKSAIGNLFVKNLPESIDNAGLQDIFKKYGNILSSKVV 132
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNN 210
T G+SKG+GFVQFE++ES++ AI+KLNG + DK+++VG F++K +R ++ N
Sbjct: 133 TSEDGKSKGYGFVQFESEESSKVAIEKLNGYTVADKELYVGKFVKKSDRILPGPDARYTN 192
Query: 211 VFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALN 270
+++KNLD ++ L++ F +G I S V+ +D +G SK FGFVN++N DDA KA+EA+N
Sbjct: 193 LYMKNLDLDVSEATLQEKFSSFGKIVSLVIAKDNNGMSKGFGFVNYDNPDDAKKAMEAMN 252
Query: 271 GKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKE 330
G + + YV +AQKK+EREQ L QFE+ KE + K++G N+Y+KN+ D + DE+L++
Sbjct: 253 GSQLGSKILYVARAQKKAEREQILHHQFEEKQKEQILKYKGSNIYVKNIDDHVSDEELRD 312
Query: 331 LFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRK 390
FS GTITS K+MRD GISKG GFV FSTPEEA++A+ +G M KPLYVA+AQRK
Sbjct: 313 HFSACGTITSAKIMRDDKGISKGFGFVCFSTPEEANKAVNTFHGFMYHGKPLYVALAQRK 372
Query: 391 EERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPPQMPPR 448
E+R+A+LQ Q++Q GPS YPP Y A +I +PPR
Sbjct: 373 EDRKAQLQLQYAQQLARLSGPSTAIIPSGYPP----------YYYAASGVI-SHVPPR 419
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 104/187 (55%), Gaps = 17/187 (9%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
T+LY+ +LD +V+++ L + FS G+++S+ + +D + S G+G+VNY NP DA +A++
Sbjct: 191 TNLYMKNLDLDVSEATLQEKFSSFGKIVSLVIAKD-NNGMSKGFGFVNYDNPDDAKKAME 249
Query: 90 VLNFTPLNNKSIRIMYSHRDPS----------------IRKSGTGNIFIKNLDKSIDHKA 133
+N + L +K + + + + I K NI++KN+D + +
Sbjct: 250 AMNGSQLGSKILYVARAQKKAEREQILHHQFEEKQKEQILKYKGSNIYVKNIDDHVSDEE 309
Query: 134 LHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHF 193
L D FS+ G I S KI D G SKGFGFV F E A A++ +G + + K ++V
Sbjct: 310 LRDHFSACGTITSAKIMRDDKGISKGFGFVCFSTPEEANKAVNTFHGFMYHGKPLYVALA 369
Query: 194 LRKQERE 200
RK++R+
Sbjct: 370 QRKEDRK 376
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/71 (60%), Positives = 56/71 (78%)
Query: 499 LSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKA 558
L + LA A+PEQQ+ +LGE LY LV +L+ AAK+TGMLLEMD E+L LLESPE+L A
Sbjct: 543 LHSLLAGAAPEQQKEILGEHLYMLVHKLKPTLAAKITGMLLEMDNGELLLLLESPESLSA 602
Query: 559 KVAEAMEVLRS 569
KV EA++VL++
Sbjct: 603 KVEEAVQVLKN 613
>gi|425772940|gb|EKV11320.1| Polyadenylate-binding protein [Penicillium digitatum PHI26]
gi|425781989|gb|EKV19920.1| Polyadenylate-binding protein [Penicillium digitatum Pd1]
Length = 736
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 185/331 (55%), Positives = 247/331 (74%), Gaps = 2/331 (0%)
Query: 18 VAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVN 77
A A+ NQ + SLYVG+LD +VT++ LY+LFS +GQV S+RVCRD TRRSLGY YVN
Sbjct: 33 AAGDAANNQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVN 92
Query: 78 YANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDT 137
Y N AD RAL+ LN+T + K RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDT
Sbjct: 93 YNNTADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDNAIDNKALHDT 152
Query: 138 FSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQ 197
F++FGNILSCK+A D SKG+GFV +E E+A NAI +NGML+NDK+VFVGH + K+
Sbjct: 153 FAAFGNILSCKVAQDEFANSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKK 212
Query: 198 ERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVN 255
+R++ +K F N+++KN+D TD++ + +F +G ITSA + D DGKS+ FGFVN
Sbjct: 213 DRQSKFEEMKANFTNIYIKNIDLEITDDEFRVMFEAFGEITSATLSHDQDGKSRGFGFVN 272
Query: 256 FENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLY 315
+ N + A AV +N K+ ++ YVG+AQKK ERE+EL+ Q+E A E K+QG+NLY
Sbjct: 273 YANHESAEAAVAEMNEKEVKTQKLYVGRAQKKHEREEELRKQYEAARMEKASKYQGVNLY 332
Query: 316 IKNLGDSIDDEKLKELFSEFGTITSCKVMRD 346
+KNL D IDDEKL++LF+ +GTITS KVMRD
Sbjct: 333 VKNLTDDIDDEKLRDLFTPYGTITSAKVMRD 363
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 95/293 (32%), Positives = 155/293 (52%), Gaps = 21/293 (7%)
Query: 117 TGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAI 175
+ ++++ LD S+ L++ FSS G + S ++ D + +S G+ +V + N + A+
Sbjct: 44 SASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERAL 103
Query: 176 DKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTI 235
+ LN LI K + +R+ KT NVF+KNLD + ++ L F +G I
Sbjct: 104 EDLNYTLIKGKPCRI----MWSQRDPALRKTGQGNVFIKNLDNAIDNKALHDTFAAFGNI 159
Query: 236 TSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSERE---Q 292
S V +D SK +GFV++E A+ A A++ +NG +D++ +VG K +R+ +
Sbjct: 160 LSCKVAQDEFANSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFE 219
Query: 293 ELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISK 352
E+K F N+YIKN+ I D++ + +F FG ITS + D G S+
Sbjct: 220 EMKANF-------------TNIYIKNIDLEITDDEFRVMFEAFGEITSATLSHDQDGKSR 266
Query: 353 GSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
G GFV ++ E A A+AEMN K + ++ LYV AQ+K ER L+ Q+ R
Sbjct: 267 GFGFVNYANHESAEAAVAEMNEKEVKTQKLYVGRAQKKHEREEELRKQYEAAR 319
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/283 (35%), Positives = 135/283 (47%), Gaps = 66/283 (23%)
Query: 349 GISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVA 408
G SKG GFV FS+P+EAS+A+ EMN +M+ +KPLYVA+AQRK+ RR++L+A +
Sbjct: 423 GKSKGFGFVCFSSPDEASKAVTEMNQRMVNAKPLYVALAQRKDVRRSQLEASIQARNTIR 482
Query: 409 MGPSVP----PRMPMYPPGPSGLGQQFLY--GQ------APPAIIP-PQMPPRGHAYRYP 455
+ P+ M P G GQQ GQ AP +P P MP Y P
Sbjct: 483 QQQAAAAAGMPQPFMQPAVFYGAGQQGFMPPGQRGGMPFAPQGGMPMPNMPAGRPQYPGP 542
Query: 456 L---GR----------NMQDFPFDMGAGSMLP----------------------VPVDMG 480
GR N Q P M A +P +P++M
Sbjct: 543 FPQGGRGMPPNQQLPPNFQGMPMGMQAPGGIPNGMGYPMPQAFGRGGGGRGVPGMPMNMR 602
Query: 481 AG--------------IPRRDASVGQPM---PITALSTALANASPEQQRTLLGESLYPLV 523
G + A GQP P +A + AL A P QQ+ +LGE+LYP +
Sbjct: 603 GGPGFSRGGPQMGRGGGRGQPAPGGQPAGGEPASA-NQALLAAPPAQQKQMLGEALYPKI 661
Query: 524 EQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEV 566
+ + + A K+TGMLLEMD E+L LL+ EAL+ KV EA+ V
Sbjct: 662 QAQQPELAGKITGMLLEMDNAELLGLLDDEEALRGKVDEALNV 704
>gi|326478130|gb|EGE02140.1| polyadenylate-binding protein [Trichophyton equinum CBS 127.97]
Length = 782
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 189/334 (56%), Positives = 254/334 (76%), Gaps = 4/334 (1%)
Query: 16 NGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGY 75
+G A A+ +Q + SLYVG+LD +VT++ LY+LFS +GQV S+RVCRD TRRSLGY Y
Sbjct: 45 SGTTAPAT-SQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAY 103
Query: 76 VNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALH 135
VNY N AD RAL+ LN+T + + RIM+S RDP++RK+G GN+FIKNLD +ID+KALH
Sbjct: 104 VNYNNTADGERALEDLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALH 163
Query: 136 DTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLR 195
DTF++FGNILSCK+A D G SKG+GFV +E E+A NAI +NGML+N+K+VFVGH +
Sbjct: 164 DTFAAFGNILSCKVAQDEYGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIA 223
Query: 196 KQERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGD-GKSKCFG 252
K++R++ +K F N++VKN+++ TDE+ + +F +YG ITSA + RD + GKS+ FG
Sbjct: 224 KKDRQSKFEEMKANFTNIYVKNVEQDVTDEEFRGLFEKYGEITSATLSRDNETGKSRGFG 283
Query: 253 FVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGL 312
FVNF + + A+ AVEALN + ++ YVG+AQKK ERE+EL+ Q+E A E K+QG+
Sbjct: 284 FVNFSDHEAASAAVEALNEYELKGQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQGV 343
Query: 313 NLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRD 346
NLYIKNL D IDDEKL+ELFS +G ITS KVMR+
Sbjct: 344 NLYIKNLSDDIDDEKLRELFSSYGNITSAKVMRE 377
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 152/499 (30%), Positives = 234/499 (46%), Gaps = 93/499 (18%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ +LD + + L+D F+ G +LS +V +D S GYG+V+Y A A+
Sbjct: 147 NVFIKNLDTAIDNKALHDTFAAFGNILSCKVAQD-EYGNSKGYGFVHYETAEAATNAIKH 205
Query: 91 LNFTPLNNKSIRIMY--SHRDPSIR----KSGTGNIFIKNLDKSIDHKALHDTFSSFGNI 144
+N LN K + + + + +D + K+ NI++KN+++ + + F +G I
Sbjct: 206 VNGMLLNEKKVFVGHHIAKKDRQSKFEEMKANFTNIYVKNVEQDVTDEEFRGLFEKYGEI 265
Query: 145 LSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET-- 201
S ++ D +G+S+GFGFV F + E+A A++ LN + ++++VG +K ERE
Sbjct: 266 TSATLSRDNETGKSRGFGFVNFSDHEAASAAVEALNEYELKGQKLYVGRAQKKHEREEEL 325
Query: 202 ----------VAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCF 251
A K + N+++KNL + DE L+++F YG ITSA VMR
Sbjct: 326 RKQYEAARIEKASKYQGVNLYIKNLSDDIDDEKLRELFSSYGNITSAKVMR--------- 376
Query: 252 GFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQG 311
E DA E + + G KSE + E K E+ DK
Sbjct: 377 -----EAIVDAPAEAEKDKEADKEKAKKEAGD---KSEEKGEAK-------SESEDK--- 418
Query: 312 LNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAE 371
S +EK + G S K + G SKG GFV FS P+EAS+A+ E
Sbjct: 419 ----------SKSEEKTE------GKTESAKPEKKHLGKSKGFGFVCFSNPDEASKAVTE 462
Query: 372 MNGKMIVSKPLYVAVAQRKEERRARLQAQF-------SQMRPVAMG---PSVPPRMPMYP 421
MN +M+ KPLYVA+AQRK+ R+++L+A Q A G P + P +
Sbjct: 463 MNQRMVHGKPLYVALAQRKDVRKSQLEASIQARNTIRQQQVAAAAGMAQPFMQPAVFYGA 522
Query: 422 PGPSGL------GQQFLYGQAPPAIIPPQMPPRGHAYRYPL------GRNM---QDFPFD 466
PG G G QF GQA ++ P M P G ++P GR M Q P +
Sbjct: 523 PGQQGFLPGAQRGMQFA-GQA--GMVMPGM-PSGRPGQFPQFPGQQGGRGMNPNQPLPPN 578
Query: 467 MGAGSM-LPVPVDMGAGIP 484
G+ +P+ GAGIP
Sbjct: 579 FAMGNQAIPMGAMQGAGIP 597
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/301 (31%), Positives = 159/301 (52%), Gaps = 22/301 (7%)
Query: 110 PSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENK 168
P+ + + ++++ LD S+ L++ FSS G + S ++ D + +S G+ +V + N
Sbjct: 50 PATSQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNT 109
Query: 169 ESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKI 228
+ A++ LN LI + + +R+ KT NVF+KNLD + ++ L
Sbjct: 110 ADGERALEDLNYTLIKGRPCRI----MWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDT 165
Query: 229 FGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKS 288
F +G I S V +D G SK +GFV++E A+ A A++ +NG ++++ +VG K
Sbjct: 166 FAAFGNILSCKVAQDEYGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIAKK 225
Query: 289 ERE---QELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMR 345
+R+ +E+K F N+Y+KN+ + DE+ + LF ++G ITS + R
Sbjct: 226 DRQSKFEEMKANF-------------TNIYVKNVEQDVTDEEFRGLFEKYGEITSATLSR 272
Query: 346 D-PSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQM 404
D +G S+G GFV FS E AS A+ +N + + LYV AQ+K ER L+ Q+
Sbjct: 273 DNETGKSRGFGFVNFSDHEAASAAVEALNEYELKGQKLYVGRAQKKHEREEELRKQYEAA 332
Query: 405 R 405
R
Sbjct: 333 R 333
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 65/102 (63%), Gaps = 6/102 (5%)
Query: 483 IPRRDASVGQPMPITALSTALANASPE-QQRTLLGESLYPLVEQLERDAAAKVTGMLLEM 541
IPR +A+ +++ A+ NA+PE QQ+ +LGE++YP + + + A K+TGMLLEM
Sbjct: 673 IPRDEAAGS-----GSINLAVFNAAPEPQQKQMLGEAIYPKILAQQPELAGKITGMLLEM 727
Query: 542 DQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNPADQLA 583
D +E++ L++ AL+AKV EA+ V + + + PA + A
Sbjct: 728 DNSELIGLVDDDVALRAKVDEALTVYDEYVKNKNDAPAGEAA 769
>gi|356548313|ref|XP_003542547.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
[Glycine max]
Length = 495
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/403 (49%), Positives = 269/403 (66%), Gaps = 7/403 (1%)
Query: 12 MSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSL 71
M+ P VAA + S+YVGDL +V + L+ F + G + SVRVCRD T SL
Sbjct: 1 MAVPATVAA-------VPASIYVGDLHPDVQEHHLFAAFVEFGSIASVRVCRDRVTMNSL 53
Query: 72 GYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDH 131
YGYVN+ + DA RA+ + N + LN K IR+M+ HRDP+ RKSG GN+F+KNL SID+
Sbjct: 54 CYGYVNFRSQQDAIRAIKLRNNSYLNGKVIRVMWLHRDPNARKSGRGNVFVKNLAGSIDN 113
Query: 132 KALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVG 191
LHD F +GNILS K+ G+SKG+GFVQFE +ESA NAI+KLNG + +KQ++VG
Sbjct: 114 AGLHDLFKKYGNILSSKVVMSEDGKSKGYGFVQFEWEESANNAIEKLNGSTVGNKQIYVG 173
Query: 192 HFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCF 251
F+RK +R K+ N+++KNLD T+ L++ F +G I S + +D +G SK F
Sbjct: 174 KFVRKGDRILPGYDAKYTNLYIKNLDSDITEALLQEKFSSFGKIISLAISKDDNGLSKGF 233
Query: 252 GFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQG 311
FVN+EN DDA KA+EA+NG +F + YV +AQKK+EREQ L QFE+ KE + K+Q
Sbjct: 234 AFVNYENPDDAKKAMEAMNGLQFGSKYLYVARAQKKAEREQILHRQFEEKRKEQILKYQA 293
Query: 312 LNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAE 371
NLY+KN+ D + D++L++LFS GTITS KVMRD GISKG GFV FS PEEA++A+
Sbjct: 294 SNLYVKNIDDDVTDKELRDLFSSCGTITSVKVMRDDKGISKGFGFVCFSNPEEANKAVMS 353
Query: 372 MNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVP 414
NG KPLY+A+AQRK+ER+ +L ++ + G S P
Sbjct: 354 FNGCTFHRKPLYIAIAQRKKERKTQLNLHYAPQQAGLDGSSTP 396
>gi|348588301|ref|XP_003479905.1| PREDICTED: polyadenylate-binding protein 1-like [Cavia porcellus]
Length = 599
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/364 (55%), Positives = 264/364 (72%), Gaps = 5/364 (1%)
Query: 66 STRRSLGYGYVNYANPADAA-RALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKN 124
S R SLG +N+ N AA RALD +NF + K +RIM+S RDPS+RKSG GNIFIKN
Sbjct: 9 SRRPSLGGIILNFENFLLAAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKN 68
Query: 125 LDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLIN 184
LDKSID+KAL+DTFS+FGNILSCK+ D +G SKG+GFV FE +E+A+ AI+K+NGML+N
Sbjct: 69 LDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLN 127
Query: 185 DKQVFVGHFLRKQERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMR 242
D++VFVG F ++ERE A +F NV++KN E DE LK +FG++G S VM
Sbjct: 128 DRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMT 187
Query: 243 DGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAM 302
D GKSK FGFV+FE +DA KAV+ +NGK+ + ++ YVG+AQKK ER+ ELK +FEQ
Sbjct: 188 DESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 247
Query: 303 KETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTP 362
++ + ++QG+NLY+KNL D IDDE+L++ FS FGTITS KVM + G SKG GFV FS+P
Sbjct: 248 QDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSP 306
Query: 363 EEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPP 422
EEA++A+ EMNG+++ +KPLYVA+AQRKEER+A L Q+ Q P P P
Sbjct: 307 EEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPA 366
Query: 423 GPSG 426
PSG
Sbjct: 367 PPSG 370
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 115/291 (39%), Positives = 170/291 (58%), Gaps = 23/291 (7%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ +LD ++ + LYD FS G +LS +V D + S GYG+V++ A RA++
Sbjct: 63 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEK 120
Query: 91 LNFTPLNNKSIRI----MYSHRDPSI--RKSGTGNIFIKNLDKSIDHKALHDTFSSFGNI 144
+N LN++ + + R+ + R N++IKN + +D + L D F FG
Sbjct: 121 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPA 180
Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAI 204
LS K+ TD SG+SKGFGFV FE E AQ A+D++NG +N KQ++VG +K ER+T +
Sbjct: 181 LSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQT-EL 239
Query: 205 KTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCF 251
K KF N++VKNLD+ DE L+K F +GTITSA VM +G G+SK F
Sbjct: 240 KRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG-GRSKGF 298
Query: 252 GFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAM 302
GFV F + ++A KAV +NG+ + YV AQ+K ER+ L Q+ Q M
Sbjct: 299 GFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRM 349
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 107/197 (54%), Gaps = 22/197 (11%)
Query: 21 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYAN 80
GA +F T++Y+ + ++ D +L DLF + G LSV+V D S +S G+G+V++
Sbjct: 147 GARAKEF--TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESG-KSKGFGFVSFER 203
Query: 81 PADAARALDVLNFTPLNNKSIRIMYSHR-----------------DPSIRKSGTGNIFIK 123
DA +A+D +N LN K I + + + D R G N+++K
Sbjct: 204 HEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGV-NLYVK 262
Query: 124 NLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLI 183
NLD ID + L FS FG I S K+ +G G+SKGFGFV F + E A A+ ++NG ++
Sbjct: 263 NLDDGIDDERLRKEFSPFGTITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTEMNGRIV 321
Query: 184 NDKQVFVGHFLRKQERE 200
K ++V RK+ER+
Sbjct: 322 ATKPLYVALAQRKEERQ 338
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA+A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 507 PLTA--SMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPE 564
Query: 555 ALKAKVAEAMEVLRSVAQQQA 575
+L++KV EA+ VL++ ++A
Sbjct: 565 SLRSKVDEAVAVLQAHQAKEA 585
>gi|315052346|ref|XP_003175547.1| hypothetical protein MGYG_03072 [Arthroderma gypseum CBS 118893]
gi|311340862|gb|EFR00065.1| hypothetical protein MGYG_03072 [Arthroderma gypseum CBS 118893]
Length = 782
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 188/334 (56%), Positives = 253/334 (75%), Gaps = 4/334 (1%)
Query: 16 NGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGY 75
+G A A+ +Q + SLYVG+LD +VT++ LY+LFS +GQV S+RVCRD TRRSLGY Y
Sbjct: 45 SGTTAPAT-SQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAY 103
Query: 76 VNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALH 135
VNY N AD RAL+ LN+T + + RIM+S RDP++RK+G GN+FIKNLD +ID+KALH
Sbjct: 104 VNYNNTADGERALEDLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALH 163
Query: 136 DTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLR 195
DTF++FGNILSCK+A D G SKG+GFV +E E+A NAI +NGML+N+K+VFVGH +
Sbjct: 164 DTFAAFGNILSCKVAQDEYGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIA 223
Query: 196 KQERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGD-GKSKCFG 252
K++R++ +K F N++VKN+++ TDE+ + +F +YG ITSA + RD + GKS+ FG
Sbjct: 224 KKDRQSKFEEMKANFTNIYVKNVEQDVTDEEFRSLFEKYGEITSATLSRDNETGKSRGFG 283
Query: 253 FVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGL 312
FVNF + + A+ AVE LN + ++ YVG+AQKK ERE+EL+ Q+E A E K+QG+
Sbjct: 284 FVNFSDHEAASAAVEGLNEYELKGQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQGV 343
Query: 313 NLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRD 346
NLYIKNL D IDDEKL+ELFS +G ITS KVMR+
Sbjct: 344 NLYIKNLSDDIDDEKLRELFSSYGNITSAKVMRE 377
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 151/499 (30%), Positives = 238/499 (47%), Gaps = 91/499 (18%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ +LD + + L+D F+ G +LS +V +D S GYG+V+Y A A+
Sbjct: 147 NVFIKNLDTAIDNKALHDTFAAFGNILSCKVAQD-EYGNSKGYGFVHYETAEAATNAIKH 205
Query: 91 LNFTPLNNKSIRIMY--SHRDPSIR----KSGTGNIFIKNLDKSIDHKALHDTFSSFGNI 144
+N LN K + + + + +D + K+ NI++KN+++ + + F +G I
Sbjct: 206 VNGMLLNEKKVFVGHHIAKKDRQSKFEEMKANFTNIYVKNVEQDVTDEEFRSLFEKYGEI 265
Query: 145 LSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET-- 201
S ++ D +G+S+GFGFV F + E+A A++ LN + ++++VG +K ERE
Sbjct: 266 TSATLSRDNETGKSRGFGFVNFSDHEAASAAVEGLNEYELKGQKLYVGRAQKKHEREEEL 325
Query: 202 ----------VAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCF 251
A K + N+++KNL + DE L+++F YG ITSA VMR+
Sbjct: 326 RKQYEAARIEKASKYQGVNLYIKNLSDDIDDEKLRELFSSYGNITSAKVMREAISDVPA- 384
Query: 252 GFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQG 311
++ + + + G K +D KA+ KS+ + E K + E+ +T K G
Sbjct: 385 --DAEKDKEADKEKAKKETGDKPED------KAETKSDEKSEDKSKSEE---KTEGKTDG 433
Query: 312 LNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAE 371
K+LG S KG GFV FS P+EAS+A+ E
Sbjct: 434 AKTEKKHLGKS-----------------------------KGFGFVCFSNPDEASKAVTE 464
Query: 372 MNGKMIVSKPLYVAVAQRKEERRARLQAQF-------SQMRPVAMG---PSVPPRMPMYP 421
MN +M+ KPLYVA+AQRK+ R+++L+A Q A G P + P +
Sbjct: 465 MNQRMVHGKPLYVALAQRKDVRKSQLEASIQARNTIRQQQVAAAAGMAQPFMQPAVFYGA 524
Query: 422 PGPSGL------GQQFLYGQAPPAIIPPQMPPR--GHAYRYP---LGRNM---QDFP--F 465
PG G G QF GQA ++ P MP G ++P GR M Q P F
Sbjct: 525 PGQQGFLPGAQRGMQFA-GQA--GMVMPGMPGGRPGQFAQFPGQQGGRGMNPNQPLPPNF 581
Query: 466 DMGAGSMLPVPVDMGAGIP 484
MG G +P+ GAGIP
Sbjct: 582 AMG-GQGIPMGAMQGAGIP 599
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/301 (31%), Positives = 159/301 (52%), Gaps = 22/301 (7%)
Query: 110 PSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENK 168
P+ + + ++++ LD S+ L++ FSS G + S ++ D + +S G+ +V + N
Sbjct: 50 PATSQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNT 109
Query: 169 ESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKI 228
+ A++ LN LI + + +R+ KT NVF+KNLD + ++ L
Sbjct: 110 ADGERALEDLNYTLIKGRPCRI----MWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDT 165
Query: 229 FGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKS 288
F +G I S V +D G SK +GFV++E A+ A A++ +NG ++++ +VG K
Sbjct: 166 FAAFGNILSCKVAQDEYGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIAKK 225
Query: 289 ERE---QELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMR 345
+R+ +E+K F N+Y+KN+ + DE+ + LF ++G ITS + R
Sbjct: 226 DRQSKFEEMKANF-------------TNIYVKNVEQDVTDEEFRSLFEKYGEITSATLSR 272
Query: 346 D-PSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQM 404
D +G S+G GFV FS E AS A+ +N + + LYV AQ+K ER L+ Q+
Sbjct: 273 DNETGKSRGFGFVNFSDHEAASAAVEGLNEYELKGQKLYVGRAQKKHEREEELRKQYEAA 332
Query: 405 R 405
R
Sbjct: 333 R 333
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 54/80 (67%), Gaps = 1/80 (1%)
Query: 505 NASPE-QQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEA 563
NA+PE QQ+ +LGE++YP + + + A K+TGMLLEMD +E++ L++ AL+AKV EA
Sbjct: 690 NAAPEPQQKQMLGEAIYPKILAQQPELAGKITGMLLEMDNSELIGLVDDDAALRAKVDEA 749
Query: 564 MEVLRSVAQQQANNPADQLA 583
+ V + + + PA + A
Sbjct: 750 LTVYDEYVKNKNDAPAGEAA 769
>gi|410987610|ref|XP_004000091.1| PREDICTED: polyadenylate-binding protein 1 [Felis catus]
Length = 672
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/346 (56%), Positives = 255/346 (73%), Gaps = 4/346 (1%)
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
DA RALD +NF + K +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FG
Sbjct: 100 DAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFG 159
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 202
NILSCK+ D +G SKG+GFV FE +E+A+ AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 160 NILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 218
Query: 203 --AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
A +F NV++KN E DE LK +FG++G S VM D GKSK FGFV+FE +
Sbjct: 219 LGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHE 278
Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
DA KAV+ +NGK+ + ++ YVG+AQKK ER+ ELK +FEQ ++ + ++QG+NLY+KNL
Sbjct: 279 DAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLD 338
Query: 321 DSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSK 380
D IDDE+L++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +K
Sbjct: 339 DGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATK 397
Query: 381 PLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSG 426
PLYVA+AQRKEER+A L Q+ Q P P P PSG
Sbjct: 398 PLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSG 443
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 115/291 (39%), Positives = 170/291 (58%), Gaps = 23/291 (7%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ +LD ++ + LYD FS G +LS +V D + S GYG+V++ A RA++
Sbjct: 136 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEK 193
Query: 91 LNFTPLNNKSIRI----MYSHRDPSI--RKSGTGNIFIKNLDKSIDHKALHDTFSSFGNI 144
+N LN++ + + R+ + R N++IKN + +D + L D F FG
Sbjct: 194 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPA 253
Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAI 204
LS K+ TD SG+SKGFGFV FE E AQ A+D++NG +N KQ++VG +K ER+T +
Sbjct: 254 LSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQT-EL 312
Query: 205 KTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCF 251
K KF N++VKNLD+ DE L+K F +GTITSA VM +G G+SK F
Sbjct: 313 KRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG-GRSKGF 371
Query: 252 GFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAM 302
GFV F + ++A KAV +NG+ + YV AQ+K ER+ L Q+ Q M
Sbjct: 372 GFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRM 422
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 107/197 (54%), Gaps = 22/197 (11%)
Query: 21 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYAN 80
GA +F T++Y+ + ++ D +L DLF + G LSV+V D S +S G+G+V++
Sbjct: 220 GARAKEF--TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESG-KSKGFGFVSFER 276
Query: 81 PADAARALDVLNFTPLNNKSIRIMYSHR-----------------DPSIRKSGTGNIFIK 123
DA +A+D +N LN K I + + + D R G N+++K
Sbjct: 277 HEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGV-NLYVK 335
Query: 124 NLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLI 183
NLD ID + L FS FG I S K+ +G G+SKGFGFV F + E A A+ ++NG ++
Sbjct: 336 NLDDGIDDERLRKEFSPFGTITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTEMNGRIV 394
Query: 184 NDKQVFVGHFLRKQERE 200
K ++V RK+ER+
Sbjct: 395 ATKPLYVALAQRKEERQ 411
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA+A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 580 PLTA--SMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPE 637
Query: 555 ALKAKVAEAMEVLRSVAQQQA 575
+L++KV EA+ VL++ ++A
Sbjct: 638 SLRSKVDEAVAVLQAHQAKEA 658
>gi|432095458|gb|ELK26654.1| Polyadenylate-binding protein 4 [Myotis davidii]
Length = 657
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 212/425 (49%), Positives = 290/425 (68%), Gaps = 30/425 (7%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+ + + SLYVG+L +VT++ LY+ S + + V ++++ + Y + +
Sbjct: 3 AAASSYPMASLYVGNLHGDVTEAMLYEKLSPR-DLTHLWVIKNITN--CVLYPRLKCVSL 59
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
A RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+F
Sbjct: 60 V-AERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 118
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+ D +G SKG+ FV FE +E+A AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 119 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 177
Query: 202 -VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
+ K K F NV++KN E DE LK++F ++G S VMRD GKSK FGFV++E
Sbjct: 178 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPTGKSKGFGFVSYEKH 237
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+DA KAVE +NGK+ + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL
Sbjct: 238 EDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNL 297
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D+IDDEKL++ FS FG+IT +VM + G SKG GFV FS+PEEA++A+ EMNG+++ S
Sbjct: 298 DDTIDDEKLRKEFSPFGSITRAEVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 356
Query: 380 KPLYVAVAQRKEERRARLQAQF----------------SQMRPVAMG---PSVPP---RM 417
KPLYVA+AQRKEER+A L Q+ +Q +P A G P+VP R
Sbjct: 357 KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP 416
Query: 418 PMYPP 422
P Y P
Sbjct: 417 PYYTP 421
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 60/75 (80%), Gaps = 2/75 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A P++Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 566 PLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPE 623
Query: 555 ALKAKVAEAMEVLRS 569
+L++KV EA+ VL++
Sbjct: 624 SLRSKVDEAVAVLQA 638
>gi|432102707|gb|ELK30188.1| Polyadenylate-binding protein 1 [Myotis davidii]
Length = 650
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/404 (49%), Positives = 279/404 (69%), Gaps = 5/404 (1%)
Query: 27 FLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAAR 86
F + SLYVGDL VT++ LY+ FS G +LSVRVCRD + RSLGYGYVN+ P DA
Sbjct: 16 FPSASLYVGDLHPEVTEAMLYEKFSAAGPILSVRVCRDALSSRSLGYGYVNFHRPEDAGH 75
Query: 87 ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
AL+ +NF L+ K +RIM+ HRDPS+R+SG GN+F+ +LD SID+K L+D F+ FG ILS
Sbjct: 76 ALNTMNFDVLHGKPVRIMWCHRDPSLRRSGVGNVFVNHLDASIDNKELYDLFAGFGTILS 135
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLR--KQERETVAI 204
CK+ +D +G KG GFV FE +E+A AI ++NG L+ +++VFVG F R ++E E A
Sbjct: 136 CKVVSDENG-PKGHGFVHFETREAADKAIKEMNGSLVKERKVFVGQFKRPNQREEERRAK 194
Query: 205 KTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAK 264
+F NV+VKN + TTDE L +IF +YG ++S +M D GKSK FGF+ FE DA +
Sbjct: 195 MEQFTNVYVKNFADGTTDEYLLEIFSQYGPLSSVKIMTDDSGKSKGFGFIRFECHADAKR 254
Query: 265 AVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSID 324
A+E +NGK+F R+ YV +AQKK ERE+EL+ + E+ + + K+ G++L++KNL +S D
Sbjct: 255 AIEEVNGKQFGGRKIYVSRAQKKKEREEELQQKLEEIKQNRIAKYHGMSLFVKNLAESTD 314
Query: 325 DEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYV 384
DE L+++F+ FGT+TS KV+ G KG GFV+FS+ EEA +A+ EM+GKM+ ++PLYV
Sbjct: 315 DEHLRKIFAPFGTVTSAKVIVK-GGRRKGFGFVSFSSREEAKKAVEEMHGKMLSARPLYV 373
Query: 385 AVAQRKEERRARLQAQFSQMRPV-AMGPSVPPRMPMYPPGPSGL 427
+ A+ K+ERRA + + + + A PS P P P P G
Sbjct: 374 SYARYKQERRAYFASYYGKKKASPAKSPSTPDTSPSQPASPDGF 417
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 57/77 (74%)
Query: 499 LSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKA 558
+++ L +ASPE Q+ +LGE L+PL++ L+ A+K+ GMLLEMD +E+L LLESPE+ +
Sbjct: 561 ITSTLVSASPEDQKKILGEWLFPLIQALQPTLASKIMGMLLEMDNSELLLLLESPESFCS 620
Query: 559 KVAEAMEVLRSVAQQQA 575
KV EA+ VL + QQA
Sbjct: 621 KVDEAVAVLEACQAQQA 637
>gi|334349575|ref|XP_003342221.1| PREDICTED: polyadenylate-binding protein 1-like [Monodelphis
domestica]
Length = 707
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 189/325 (58%), Positives = 248/325 (76%), Gaps = 4/325 (1%)
Query: 81 PADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSS 140
PADA RAL+ +NF + K +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL DTFS+
Sbjct: 131 PADAERALETMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALFDTFSA 190
Query: 141 FGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERE 200
FGNILSCK+ D G SKG+GFV FE +++A+ AIDK+NGML+ND++VFVG F ++ERE
Sbjct: 191 FGNILSCKVVCDEHG-SKGYGFVHFETRDAAERAIDKMNGMLLNDRKVFVGRFKSRKERE 249
Query: 201 TV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFEN 258
A +F NV++KN E D LK++FG++G S VM D G SK FGFVNFE
Sbjct: 250 AELGARAKEFTNVYIKNFGEDMDDLRLKRLFGKFGPALSVKVMTDESGTSKGFGFVNFER 309
Query: 259 ADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKN 318
+DA KAVE +NGK+ + ++ YVG+AQKK ER+ ELK +FEQ ++ + ++QG+NLY+KN
Sbjct: 310 HEDAQKAVEEMNGKELNGKKIYVGRAQKKGERQTELKRKFEQLKQDRITRYQGVNLYVKN 369
Query: 319 LGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIV 378
L D IDDE+L++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++
Sbjct: 370 LDDGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVA 428
Query: 379 SKPLYVAVAQRKEERRARLQAQFSQ 403
+KPLY+A+AQRKEER+A L Q+ Q
Sbjct: 429 TKPLYIALAQRKEERQAHLTNQYMQ 453
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 183/592 (30%), Positives = 289/592 (48%), Gaps = 94/592 (15%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ +LD ++ + L+D FS G +LS +V D S GYG+V++ A RA+D
Sbjct: 169 NIFIKNLDKSIDNKALFDTFSAFGNILSCKVVCD--EHGSKGYGFVHFETRDAAERAIDK 226
Query: 91 LNFTPLNNKSIRI----MYSHRDPSI--RKSGTGNIFIKNLDKSIDHKALHDTFSSFGNI 144
+N LN++ + + R+ + R N++IKN + +D L F FG
Sbjct: 227 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDLRLKRLFGKFGPA 286
Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAI 204
LS K+ TD SG SKGFGFV FE E AQ A++++NG +N K+++VG +K ER+T +
Sbjct: 287 LSVKVMTDESGTSKGFGFVNFERHEDAQKAVEEMNGKELNGKKIYVGRAQKKGERQT-EL 345
Query: 205 KTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCF 251
K KF N++VKNLD+ DE L+K F +GTITSA VM +G G+SK F
Sbjct: 346 KRKFEQLKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG-GRSKGF 404
Query: 252 GFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQG 311
GFV F + ++A KAV +NG+ + Y+ A +R++E +
Sbjct: 405 GFVCFSSPEEATKAVTEMNGRIVATKPLYIALA----QRKEERQAHL------------- 447
Query: 312 LNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP--SGISKGSGFVAFSTPEEASRAL 369
N Y++ + S + + +P + SG+ + P+ +R
Sbjct: 448 TNQYMQRMA-------------------SVRAVPNPVLNPYQPPSGYFMTAIPQTQNRPA 488
Query: 370 AEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLG- 428
+M +P +Q R Q +RP A P P P G+G
Sbjct: 489 YYPASQMAPLRPSPRWTSQ--GARPHPFQNLPGAIRPAAARPPFGSMRPTSSQLPRGVGA 546
Query: 429 QQFLYGQAPPAIIPP-------------QMPPRGHAYRYPLG-RNMQDFPFDMGAGSMLP 474
Q + + A+ PP +M P+ Y+Y G RN Q
Sbjct: 547 SQRIVNSSTQALGPPLGASAGAAGAPGVRMGPQ---YKYAAGVRNPQHH----------- 592
Query: 475 VPVDMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKV 534
V V A + + V P+TA + LA A P++Q+ +LGE L+PL++ + A K+
Sbjct: 593 VNVQPQASVQQPAVHVQGQEPLTA--SMLAAAPPQEQKQMLGERLFPLIQAMHPSLAGKI 650
Query: 535 TGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNPADQLASLS 586
TGMLLE+D +E+LH+LESPE+L++KV EA+ VL++ ++A A + A+ +
Sbjct: 651 TGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHQAKEAAQKAVKSAAAT 702
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 105/197 (53%), Gaps = 22/197 (11%)
Query: 21 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYAN 80
GA +F T++Y+ + ++ D +L LF + G LSV+V D S S G+G+VN+
Sbjct: 253 GARAKEF--TNVYIKNFGEDMDDLRLKRLFGKFGPALSVKVMTDESG-TSKGFGFVNFER 309
Query: 81 PADAARALDVLNFTPLNNKSIRIMYSHR-----------------DPSIRKSGTGNIFIK 123
DA +A++ +N LN K I + + + D R G N+++K
Sbjct: 310 HEDAQKAVEEMNGKELNGKKIYVGRAQKKGERQTELKRKFEQLKQDRITRYQGV-NLYVK 368
Query: 124 NLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLI 183
NLD ID + L FS FG I S K+ +G G+SKGFGFV F + E A A+ ++NG ++
Sbjct: 369 NLDDGIDDERLRKEFSPFGTITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTEMNGRIV 427
Query: 184 NDKQVFVGHFLRKQERE 200
K +++ RK+ER+
Sbjct: 428 ATKPLYIALAQRKEERQ 444
>gi|403305068|ref|XP_003943097.1| PREDICTED: polyadenylate-binding protein 1 [Saimiri boliviensis
boliviensis]
Length = 803
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/367 (54%), Positives = 260/367 (70%), Gaps = 14/367 (3%)
Query: 62 CRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIF 121
CRD R L + A RALD +NF + K +RIM+S RDPS+RKSG GNIF
Sbjct: 220 CRDEPQRPQLPH----------AERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIF 269
Query: 122 IKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGM 181
IKNLDKSID+KAL+DTFS+FGNILSCK+ D +G SKG+GFV FE +E+A+ AI+K+NGM
Sbjct: 270 IKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGM 328
Query: 182 LINDKQVFVGHFLRKQERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAV 239
L+ND++VFVG F ++ERE A +F NV++KN E DE LK +FG++G S
Sbjct: 329 LLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVK 388
Query: 240 VMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFE 299
VM D GKSK FGFV+FE +DA KAV+ +NGK+ + ++ YVG+AQKK ER+ ELK +FE
Sbjct: 389 VMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFE 448
Query: 300 QAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAF 359
Q ++ + ++QG+NLY+KNL D IDDE+L++ FS FGTITS KVM + G SKG GFV F
Sbjct: 449 QMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCF 507
Query: 360 STPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPM 419
S+PEEA++A+ EMNG+++ +KPLYVA+AQRKEER+A L Q+ Q P P
Sbjct: 508 SSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPY 567
Query: 420 YPPGPSG 426
P PSG
Sbjct: 568 QPAPPSG 574
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 115/291 (39%), Positives = 170/291 (58%), Gaps = 23/291 (7%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ +LD ++ + LYD FS G +LS +V D + S GYG+V++ A RA++
Sbjct: 267 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEK 324
Query: 91 LNFTPLNNKSIRI----MYSHRDPSI--RKSGTGNIFIKNLDKSIDHKALHDTFSSFGNI 144
+N LN++ + + R+ + R N++IKN + +D + L D F FG
Sbjct: 325 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPA 384
Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAI 204
LS K+ TD SG+SKGFGFV FE E AQ A+D++NG +N KQ++VG +K ER+T +
Sbjct: 385 LSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQT-EL 443
Query: 205 KTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCF 251
K KF N++VKNLD+ DE L+K F +GTITSA VM +G G+SK F
Sbjct: 444 KRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG-GRSKGF 502
Query: 252 GFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAM 302
GFV F + ++A KAV +NG+ + YV AQ+K ER+ L Q+ Q M
Sbjct: 503 GFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRM 553
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 107/197 (54%), Gaps = 22/197 (11%)
Query: 21 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYAN 80
GA +F T++Y+ + ++ D +L DLF + G LSV+V D S +S G+G+V++
Sbjct: 351 GARAKEF--TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESG-KSKGFGFVSFER 407
Query: 81 PADAARALDVLNFTPLNNKSIRIMYSHR-----------------DPSIRKSGTGNIFIK 123
DA +A+D +N LN K I + + + D R G N+++K
Sbjct: 408 HEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGV-NLYVK 466
Query: 124 NLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLI 183
NLD ID + L FS FG I S K+ +G G+SKGFGFV F + E A A+ ++NG ++
Sbjct: 467 NLDDGIDDERLRKEFSPFGTITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTEMNGRIV 525
Query: 184 NDKQVFVGHFLRKQERE 200
K ++V RK+ER+
Sbjct: 526 ATKPLYVALAQRKEERQ 542
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA+A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 711 PLTA--SMLASAPPQEQKQMLGERLFPLIQAMHPSLAGKITGMLLEIDNSELLHMLESPE 768
Query: 555 ALKAKVAEAMEVLRSVAQQQA 575
+L++KV EA+ VL++ ++A
Sbjct: 769 SLRSKVDEAVAVLQAHQAKEA 789
>gi|339246497|ref|XP_003374882.1| putative RNA recognition motif protein [Trichinella spiralis]
gi|316971853|gb|EFV55580.1| putative RNA recognition motif protein [Trichinella spiralis]
Length = 758
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/385 (51%), Positives = 265/385 (68%), Gaps = 31/385 (8%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A F SLYVGDL +VT++ L++ FS G VLS+RVCRD TRRSLGY YVNY
Sbjct: 4 AIAQNFAMASLYVGDLHPDVTEAMLFEKFSHAGPVLSIRVCRDAVTRRSLGYAYVNYQQT 63
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
DA RALD +NF P+ + IRIM+S RDPS+R+SG GN+FIKNLDK IDHKA++DTFS+F
Sbjct: 64 PDAERALDTMNFDPVFGRPIRIMWSQRDPSLRRSGVGNVFIKNLDKDIDHKAIYDTFSNF 123
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQE--R 199
GNILSCK+ATD +G SKG+G +VG F+ + + R
Sbjct: 124 GNILSCKVATDENGVSKGYG---------------------------YVGKFIPRAQRMR 156
Query: 200 ETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
E KF NV+VKN DE+ TD+ L +F ++G I S VVM++ D KSK FGFV+FEN
Sbjct: 157 EIGETTRKFTNVYVKNFDENFTDQCLVDLFSKFGKIQSCVVMKE-DDKSKGFGFVSFENP 215
Query: 260 DDAAKAVEALNGKKF-DDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKN 318
+DA AV+ +N + ++ YVG+AQKK+ER+ ELK ++E E + +++G+NLY+KN
Sbjct: 216 EDAEAAVKEMNEYQLPSGKKLYVGRAQKKAERQAELKRRYEMLKLERIQQYEGVNLYLKN 275
Query: 319 LGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIV 378
L DS+DD +L++ F +FG ITS KVM D G SKG GFV FS+P+EA+RA++EMN + +
Sbjct: 276 LDDSVDDAQLRKAFEKFGVITSAKVMTDEKGQSKGFGFVCFSSPDEATRAVSEMNNQKLG 335
Query: 379 SKPLYVAVAQRKEERRARLQAQFSQ 403
+KPLYVA+AQRKE+R+A+L +Q Q
Sbjct: 336 NKPLYVALAQRKEDRKAQLASQLVQ 360
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 51/65 (78%), Gaps = 2/65 (3%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+T S+ L++A P++Q+ +LGE L+PL+ ++ +D A K+TGMLLEMD E+L++LESP+
Sbjct: 558 PLT--SSMLSSAPPQEQKQMLGERLFPLIMEIHKDLAGKITGMLLEMDNGELLNMLESPD 615
Query: 555 ALKAK 559
L AK
Sbjct: 616 LLNAK 620
>gi|449284083|gb|EMC90664.1| Polyadenylate-binding protein 1, partial [Columba livia]
Length = 573
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/345 (56%), Positives = 255/345 (73%), Gaps = 4/345 (1%)
Query: 84 AARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGN 143
A RALD +NF + K +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FGN
Sbjct: 1 AERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGN 60
Query: 144 ILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV- 202
ILSCK+ D +G SKG+GFV FE +E+A+ AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 61 ILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 119
Query: 203 -AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADD 261
A +F NV++KN E DE LK++FG++G S VM D GKSK FGFV+FE +D
Sbjct: 120 GARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHED 179
Query: 262 AAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGD 321
A KAV+ +NGK+ + ++ YVG+AQKK ER+ ELK +FEQ ++ + ++QG+NLY+KNL D
Sbjct: 180 AQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDD 239
Query: 322 SIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKP 381
IDDE+L++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +KP
Sbjct: 240 GIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKP 298
Query: 382 LYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSG 426
LYVA+AQRKEER+A L Q+ Q P P P PSG
Sbjct: 299 LYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSG 343
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 114/291 (39%), Positives = 170/291 (58%), Gaps = 23/291 (7%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ +LD ++ + LYD FS G +LS +V D + S GYG+V++ A RA++
Sbjct: 36 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEK 93
Query: 91 LNFTPLNNKSIRI----MYSHRDPSI--RKSGTGNIFIKNLDKSIDHKALHDTFSSFGNI 144
+N LN++ + + R+ + R N++IKN + +D + L + F FG
Sbjct: 94 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPA 153
Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAI 204
LS K+ TD SG+SKGFGFV FE E AQ A+D++NG +N KQ++VG +K ER+T +
Sbjct: 154 LSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQT-EL 212
Query: 205 KTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCF 251
K KF N++VKNLD+ DE L+K F +GTITSA VM +G G+SK F
Sbjct: 213 KRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG-GRSKGF 271
Query: 252 GFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAM 302
GFV F + ++A KAV +NG+ + YV AQ+K ER+ L Q+ Q M
Sbjct: 272 GFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRM 322
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 107/197 (54%), Gaps = 22/197 (11%)
Query: 21 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYAN 80
GA +F T++Y+ + ++ D +L +LF + G LSV+V D S +S G+G+V++
Sbjct: 120 GARAKEF--TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESG-KSKGFGFVSFER 176
Query: 81 PADAARALDVLNFTPLNNKSIRIMYSHR-----------------DPSIRKSGTGNIFIK 123
DA +A+D +N LN K I + + + D R G N+++K
Sbjct: 177 HEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGV-NLYVK 235
Query: 124 NLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLI 183
NLD ID + L FS FG I S K+ +G G+SKGFGFV F + E A A+ ++NG ++
Sbjct: 236 NLDDGIDDERLRKEFSPFGTITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTEMNGRIV 294
Query: 184 NDKQVFVGHFLRKQERE 200
K ++V RK+ER+
Sbjct: 295 ATKPLYVALAQRKEERQ 311
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 65/89 (73%), Gaps = 7/89 (7%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA+A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 481 PLTA--SMLASAPPQEQKQMLGERLFPLIQSMHPTLAGKITGMLLEIDNSELLHMLESPE 538
Query: 555 ALKAKVAEAMEVL-----RSVAQQQANNP 578
+L++KV EA+ VL + AQ+ NNP
Sbjct: 539 SLRSKVDEAVAVLQAHQAKEAAQKAVNNP 567
>gi|356505295|ref|XP_003521427.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
[Glycine max]
Length = 632
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 213/460 (46%), Positives = 294/460 (63%), Gaps = 25/460 (5%)
Query: 12 MSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSL 71
M+ P VAA + SLYVGDL NV+D+ L D FS + SVRVC+D ST +SL
Sbjct: 1 MAVPPSVAAAPA-------SLYVGDLHPNVSDNHLVDAFSDFESLASVRVCKDSSTGKSL 53
Query: 72 GYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDH 131
YGYVN+ +P DA RA+++ N + LN K++R+M+S RDP RK+ GN+F+KNL +SID+
Sbjct: 54 CYGYVNFVSPQDAIRAIELKNNSTLNGKAMRVMWSRRDPDARKNAIGNLFVKNLPESIDN 113
Query: 132 KALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVG 191
L D F +GNILS K+ G+SKG+GFVQFE++ES+ AI+KLNG + DKQ++VG
Sbjct: 114 AGLQDMFKKYGNILSSKVVMSEDGKSKGYGFVQFESEESSNVAIEKLNGSTVGDKQLYVG 173
Query: 192 HFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCF 251
F++K +R ++ N+++KNLD ++ L++ F +G I S V+ +D G SK F
Sbjct: 174 KFVKKSDRILPGPDARYTNLYMKNLDLDVSEATLQEKFSSFGKIVSLVIAKDNIGMSKGF 233
Query: 252 GFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQG 311
GFVN++N DDA +A+EA+NG K + YV +AQKK+EREQ L QFE+ KE + K++G
Sbjct: 234 GFVNYDNPDDAKRAMEAMNGSKLGSKILYVARAQKKAEREQILHHQFEEKRKEQILKYKG 293
Query: 312 LNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAE 371
N+Y+KN+ D + DE+L++ FS G ITS K+MRD GISKG GFV FSTPEEA++A+
Sbjct: 294 SNIYVKNIDDHVSDEELRDHFSACGIITSAKIMRDDKGISKGFGFVCFSTPEEANKAVNT 353
Query: 372 MNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQF 431
+G M KPLYVA+AQRKE+R+A+LQ Q++Q GPS YPP
Sbjct: 354 FHGFMFHGKPLYVALAQRKEDRKAQLQLQYAQQVAGLSGPSTAIIPGGYPP--------- 404
Query: 432 LYGQAPPAIIPPQMPPRGHAYRYPLGRNMQDFPFDMGAGS 471
Y A +I +PPR G Q P G G+
Sbjct: 405 -YYYAATGVI-SHVPPRA-------GLMYQHLPMRPGWGA 435
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/71 (60%), Positives = 56/71 (78%)
Query: 499 LSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKA 558
L + LA A+PEQQ+ +LGE LY LV +L+ AAK+TGMLLEMD E+L LLESPE+L A
Sbjct: 539 LHSMLAGAAPEQQKEILGEHLYMLVHKLKPTLAAKITGMLLEMDNGELLLLLESPESLSA 598
Query: 559 KVAEAMEVLRS 569
KV EA++VL++
Sbjct: 599 KVEEAVQVLKN 609
>gi|324501709|gb|ADY40758.1| Polyadenylate-binding protein 1 [Ascaris suum]
Length = 595
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 226/576 (39%), Positives = 330/576 (57%), Gaps = 51/576 (8%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL +V ++ L + FS +G+VLS+RVCRD TRRSLGY YVN+ P DA +AL+
Sbjct: 17 SLYVGDLHPDVNETVLLEKFSNIGRVLSIRVCRDALTRRSLGYAYVNFERPEDAKQALET 76
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF ++ + IRIM+S R PS + GN+F+KNL+ S++ KAL++ FS FGNI+SCK+A
Sbjct: 77 MNFDIVHGRPIRIMWSQRRPSTSRVAAGNVFVKNLNGSVNSKALYNKFSVFGNIVSCKLA 136
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK--F 208
D +SKG+GFVQFE +E+A+ AID NG++ K+++VG F + ER A +T F
Sbjct: 137 VDEQSKSKGYGFVQFETEEAARKAIDGTNGVIFEGKRIYVGRFQSRSERSEQAKRTTNCF 196
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NVFVKN + E L+++F ++G I S V DGDGK FGFV FEN DDA KAV+
Sbjct: 197 TNVFVKNFADILDKEKLQQLFAKFGKIVSCAVSVDGDGKPNGFGFVAFENPDDAEKAVKD 256
Query: 269 LNGKKF--DDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
+ DR+ YV + QKK ER EL +++ E +++G NLY+KNL D+IDD+
Sbjct: 257 MQDYHLPGSDRKLYVSRFQKKCERLAELDRKYQLEKNERAKRYEGANLYLKNLDDAIDDD 316
Query: 327 KLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 386
L+ F E+G + S KVMR G SKG GFV F P+EA +A+ M GKM+ +KPLYV++
Sbjct: 317 MLRRSFGEYGNVISAKVMRSDDGRSKGFGFVCFDKPDEAVKAMTAMKGKMVCTKPLYVSM 376
Query: 387 AQRKEERRARLQAQFSQ------MRPVAMGPSVP--PRMPMYPPGPSGLGQQFLYGQAPP 438
AQRKE+R+A + +Q+ Q M+ + G + + P + G+ L
Sbjct: 377 AQRKEDRKAFIASQYMQRIASIRMQATSFGSGMTYMSDSTVVQPLFACYGRGTLQRNMSN 436
Query: 439 AIIPPQMPPRGHAYRYPLGRNMQDFPFDMGAGSML------------------------- 473
+ M P H++ +G + M G+M+
Sbjct: 437 DVAVATMVPGQHSW-LQMGDIDKSQTQRMAVGAMVYGQQNVRSQYAIMQSDGDCRGQTEN 495
Query: 474 PVPVDM------GAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLE 527
P P G PR VGQ P+T L+ + ++Q+ ++ E + PLV ++
Sbjct: 496 PAPYSQTFSEFRGYMAPR----VGQVEPLTP--HILSQLTVQKQKQVIAERICPLVPRIY 549
Query: 528 RDA-AAKVTGMLLEMDQTEVLHLLESPEALKAKVAE 562
+ A K+ GMLLEMD E+L +L + L++++ E
Sbjct: 550 KGPDANKIMGMLLEMDNAELLMMLNNEGLLRSRINE 585
>gi|440913295|gb|ELR62762.1| Polyadenylate-binding protein 1, partial [Bos grunniens mutus]
Length = 572
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/345 (56%), Positives = 254/345 (73%), Gaps = 4/345 (1%)
Query: 84 AARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGN 143
A RALD +NF + K +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FGN
Sbjct: 1 AERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGN 60
Query: 144 ILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV- 202
ILSCK+ D +G SKG+GFV FE +E+A+ AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 61 ILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 119
Query: 203 -AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADD 261
A +F NV++KN E DE LK +FG++G S VM D GKSK FGFV+FE +D
Sbjct: 120 GARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHED 179
Query: 262 AAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGD 321
A KAV+ +NGK+ + ++ YVG+AQKK ER+ ELK +FEQ ++ + ++QG+NLY+KNL D
Sbjct: 180 AQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDD 239
Query: 322 SIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKP 381
IDDE+L++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +KP
Sbjct: 240 GIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKP 298
Query: 382 LYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSG 426
LYVA+AQRKEER+A L Q+ Q P P P PSG
Sbjct: 299 LYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSG 343
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 115/291 (39%), Positives = 170/291 (58%), Gaps = 23/291 (7%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ +LD ++ + LYD FS G +LS +V D + S GYG+V++ A RA++
Sbjct: 36 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEK 93
Query: 91 LNFTPLNNKSIRI----MYSHRDPSI--RKSGTGNIFIKNLDKSIDHKALHDTFSSFGNI 144
+N LN++ + + R+ + R N++IKN + +D + L D F FG
Sbjct: 94 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPA 153
Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAI 204
LS K+ TD SG+SKGFGFV FE E AQ A+D++NG +N KQ++VG +K ER+T +
Sbjct: 154 LSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQT-EL 212
Query: 205 KTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCF 251
K KF N++VKNLD+ DE L+K F +GTITSA VM +G G+SK F
Sbjct: 213 KRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG-GRSKGF 271
Query: 252 GFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAM 302
GFV F + ++A KAV +NG+ + YV AQ+K ER+ L Q+ Q M
Sbjct: 272 GFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRM 322
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 107/197 (54%), Gaps = 22/197 (11%)
Query: 21 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYAN 80
GA +F T++Y+ + ++ D +L DLF + G LSV+V D S +S G+G+V++
Sbjct: 120 GARAKEF--TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESG-KSKGFGFVSFER 176
Query: 81 PADAARALDVLNFTPLNNKSIRIMYSHR-----------------DPSIRKSGTGNIFIK 123
DA +A+D +N LN K I + + + D R G N+++K
Sbjct: 177 HEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGV-NLYVK 235
Query: 124 NLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLI 183
NLD ID + L FS FG I S K+ +G G+SKGFGFV F + E A A+ ++NG ++
Sbjct: 236 NLDDGIDDERLRKEFSPFGTITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTEMNGRIV 294
Query: 184 NDKQVFVGHFLRKQERE 200
K ++V RK+ER+
Sbjct: 295 ATKPLYVALAQRKEERQ 311
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA+A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 480 PLTA--SMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPE 537
Query: 555 ALKAKVAEAMEVLRSVAQQQA 575
+L++KV EA+ VL++ ++A
Sbjct: 538 SLRSKVDEAVAVLQAHQAKEA 558
>gi|426236179|ref|XP_004012050.1| PREDICTED: polyadenylate-binding protein 1 [Ovis aries]
Length = 577
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/345 (56%), Positives = 254/345 (73%), Gaps = 4/345 (1%)
Query: 84 AARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGN 143
A RALD +NF + K +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FGN
Sbjct: 6 AERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGN 65
Query: 144 ILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV- 202
ILSCK+ D +G SKG+GFV FE +E+A+ AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 66 ILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 124
Query: 203 -AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADD 261
A +F NV++KN E DE LK +FG++G S VM D GKSK FGFV+FE +D
Sbjct: 125 GARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHED 184
Query: 262 AAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGD 321
A KAV+ +NGK+ + ++ YVG+AQKK ER+ ELK +FEQ ++ + ++QG+NLY+KNL D
Sbjct: 185 AQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDD 244
Query: 322 SIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKP 381
IDDE+L++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +KP
Sbjct: 245 GIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKP 303
Query: 382 LYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSG 426
LYVA+AQRKEER+A L Q+ Q P P P PSG
Sbjct: 304 LYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSG 348
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 115/291 (39%), Positives = 170/291 (58%), Gaps = 23/291 (7%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ +LD ++ + LYD FS G +LS +V D + S GYG+V++ A RA++
Sbjct: 41 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEK 98
Query: 91 LNFTPLNNKSIRI----MYSHRDPSI--RKSGTGNIFIKNLDKSIDHKALHDTFSSFGNI 144
+N LN++ + + R+ + R N++IKN + +D + L D F FG
Sbjct: 99 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPA 158
Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAI 204
LS K+ TD SG+SKGFGFV FE E AQ A+D++NG +N KQ++VG +K ER+T +
Sbjct: 159 LSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQT-EL 217
Query: 205 KTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCF 251
K KF N++VKNLD+ DE L+K F +GTITSA VM +G G+SK F
Sbjct: 218 KRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG-GRSKGF 276
Query: 252 GFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAM 302
GFV F + ++A KAV +NG+ + YV AQ+K ER+ L Q+ Q M
Sbjct: 277 GFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRM 327
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 107/197 (54%), Gaps = 22/197 (11%)
Query: 21 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYAN 80
GA +F T++Y+ + ++ D +L DLF + G LSV+V D S +S G+G+V++
Sbjct: 125 GARAKEF--TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESG-KSKGFGFVSFER 181
Query: 81 PADAARALDVLNFTPLNNKSIRIMYSHR-----------------DPSIRKSGTGNIFIK 123
DA +A+D +N LN K I + + + D R G N+++K
Sbjct: 182 HEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGV-NLYVK 240
Query: 124 NLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLI 183
NLD ID + L FS FG I S K+ +G G+SKGFGFV F + E A A+ ++NG ++
Sbjct: 241 NLDDGIDDERLRKEFSPFGTITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTEMNGRIV 299
Query: 184 NDKQVFVGHFLRKQERE 200
K ++V RK+ER+
Sbjct: 300 ATKPLYVALAQRKEERQ 316
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA+A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 485 PLTA--SMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPE 542
Query: 555 ALKAKVAEAMEVLRSVAQQQA 575
+L++KV EA+ VL++ ++A
Sbjct: 543 SLRSKVDEAVAVLQAHQAKEA 563
>gi|326917956|ref|XP_003205259.1| PREDICTED: polyadenylate-binding protein 1-like [Meleagris
gallopavo]
Length = 652
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/343 (56%), Positives = 254/343 (74%), Gaps = 4/343 (1%)
Query: 86 RALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNIL 145
RALD +NF + K +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FGNIL
Sbjct: 82 RALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNIL 141
Query: 146 SCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--A 203
SCK+ D +G SKG+GFV FE +E+A+ AI+K+NGML+ND++VFVG F ++ERE A
Sbjct: 142 SCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGA 200
Query: 204 IKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAA 263
+F NV++KN E DE LK++FG++G S VM D GKSK FGFV+FE +DA
Sbjct: 201 RAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQ 260
Query: 264 KAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSI 323
KAV+ +NGK+ + ++ YVG+AQKK ER+ ELK +FEQ ++ + ++QG+NLY+KNL D I
Sbjct: 261 KAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGI 320
Query: 324 DDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLY 383
DDE+L++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +KPLY
Sbjct: 321 DDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLY 379
Query: 384 VAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSG 426
VA+AQRKEER+A L Q+ Q P P P PSG
Sbjct: 380 VALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSG 422
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 114/291 (39%), Positives = 170/291 (58%), Gaps = 23/291 (7%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ +LD ++ + LYD FS G +LS +V D + S GYG+V++ A RA++
Sbjct: 115 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEK 172
Query: 91 LNFTPLNNKSIRI----MYSHRDPSI--RKSGTGNIFIKNLDKSIDHKALHDTFSSFGNI 144
+N LN++ + + R+ + R N++IKN + +D + L + F FG
Sbjct: 173 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPA 232
Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAI 204
LS K+ TD SG+SKGFGFV FE E AQ A+D++NG +N KQ++VG +K ER+T +
Sbjct: 233 LSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQT-EL 291
Query: 205 KTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCF 251
K KF N++VKNLD+ DE L+K F +GTITSA VM +G G+SK F
Sbjct: 292 KRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG-GRSKGF 350
Query: 252 GFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAM 302
GFV F + ++A KAV +NG+ + YV AQ+K ER+ L Q+ Q M
Sbjct: 351 GFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRM 401
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 107/197 (54%), Gaps = 22/197 (11%)
Query: 21 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYAN 80
GA +F T++Y+ + ++ D +L +LF + G LSV+V D S +S G+G+V++
Sbjct: 199 GARAKEF--TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESG-KSKGFGFVSFER 255
Query: 81 PADAARALDVLNFTPLNNKSIRIMYSHR-----------------DPSIRKSGTGNIFIK 123
DA +A+D +N LN K I + + + D R G N+++K
Sbjct: 256 HEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGV-NLYVK 314
Query: 124 NLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLI 183
NLD ID + L FS FG I S K+ +G G+SKGFGFV F + E A A+ ++NG ++
Sbjct: 315 NLDDGIDDERLRKEFSPFGTITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTEMNGRIV 373
Query: 184 NDKQVFVGHFLRKQERE 200
K ++V RK+ER+
Sbjct: 374 ATKPLYVALAQRKEERQ 390
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 65/89 (73%), Gaps = 7/89 (7%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA+A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 560 PLTA--SMLASAPPQEQKQMLGERLFPLIQSMHPTLAGKITGMLLEIDNSELLHMLESPE 617
Query: 555 ALKAKVAEAMEVL-----RSVAQQQANNP 578
+L++KV EA+ VL + AQ+ NNP
Sbjct: 618 SLRSKVDEAVAVLQAHQAKEAAQKAVNNP 646
>gi|194386544|dbj|BAG61082.1| unnamed protein product [Homo sapiens]
Length = 604
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/406 (49%), Positives = 267/406 (65%), Gaps = 36/406 (8%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
S + SLYVGDL +VT++ LY+ FS G +LS+RVCRD+ TRRSLGY YVN+ PA
Sbjct: 4 SAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPA 63
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
DA RALD +NF + K +RIM+S RDPS+RKSG
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSG-------------------------- 97
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 202
+ D +G SKG+GFV FE +E+A+ AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 98 ------VVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 150
Query: 203 --AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
A +F NV++KN E DE LK +FG++G S VM D GKSK FGFV+FE +
Sbjct: 151 LGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHE 210
Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
DA KAV+ +NGK+ + ++ YVG+AQKK ER+ ELK +FEQ ++ + ++QG+NLY+KNL
Sbjct: 211 DAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLD 270
Query: 321 DSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSK 380
D IDDE+L++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +K
Sbjct: 271 DGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATK 329
Query: 381 PLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSG 426
PLYVA+AQRKEER+A L Q+ Q P P P PSG
Sbjct: 330 PLYVALAQRKEERQAHLTNQYMQRMASVQAVPNPVINPYQPAPPSG 375
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 107/197 (54%), Gaps = 22/197 (11%)
Query: 21 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYAN 80
GA +F T++Y+ + ++ D +L DLF + G LSV+V D S + S G+G+V++
Sbjct: 152 GARAKEF--TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGK-SKGFGFVSFER 208
Query: 81 PADAARALDVLNFTPLNNKSIRIMYSHR-----------------DPSIRKSGTGNIFIK 123
DA +A+D +N LN K I + + + D R G N+++K
Sbjct: 209 HEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGV-NLYVK 267
Query: 124 NLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLI 183
NLD ID + L FS FG I S K+ +G G+SKGFGFV F + E A A+ ++NG ++
Sbjct: 268 NLDDGIDDERLRKEFSPFGTITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTEMNGRIV 326
Query: 184 NDKQVFVGHFLRKQERE 200
K ++V RK+ER+
Sbjct: 327 ATKPLYVALAQRKEERQ 343
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA+A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 512 PLTA--SMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPE 569
Query: 555 ALKAKVAEAMEVLRSVAQQQA 575
+L++KV EA+ VL++ ++A
Sbjct: 570 SLRSKVDEAVAVLQAHQAKEA 590
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Query: 302 MKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRD-PSGISKGSGFVAFS 360
M + + +LY+ +L + + L E FS G I S +V RD + S G +V F
Sbjct: 1 MNPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQ 60
Query: 361 TPEEASRALAEMNGKMIVSKPLYVAVAQR 389
P +A RAL MN +I KP+ + +QR
Sbjct: 61 QPADAERALDTMNFDVIKGKPVRIMWSQR 89
>gi|318087106|gb|ADV40145.1| putative apoptosis-promoting RNA-binding protein TIA-1/TIAR
[Latrodectus hesperus]
Length = 332
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 191/329 (58%), Positives = 249/329 (75%), Gaps = 2/329 (0%)
Query: 41 VTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKS 100
VT++ L++ FS G VLS+RVCRDL RRSLGY YVN+ P DA RALD +NF + +
Sbjct: 4 VTEAMLFEKFSSAGPVLSIRVCRDLIARRSLGYAYVNFQQPVDAERALDTMNFDMVKGRP 63
Query: 101 IRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGF 160
IRIM+S RDPS+RKSG GN+FIKNLDKSID+KA++DTFS+FGNILSCK+ATD SKG+
Sbjct: 64 IRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGNILSCKVATDEESNSKGY 123
Query: 161 GFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKT--KFNNVFVKNLDE 218
GFV FE +E+A NAI K+NGML+N ++VFVG F+ + ERE + +F NV++KN +
Sbjct: 124 GFVHFETEEAANNAIQKVNGMLLNGRKVFVGKFVPRSEREKQLGQKARRFMNVYIKNFGD 183
Query: 219 STTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDRE 278
DE L+++F +YG ITSA VM D GK K FGFV+FE+ ++A KAV LN K+ + +
Sbjct: 184 DLDDEKLREMFEKYGKITSAKVMADETGKPKGFGFVSFEDPENAEKAVNDLNNKELNGKV 243
Query: 279 WYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTI 338
YVG+AQKKSER ELK +FEQ + ++++QG+NLY+KNL DSIDDE+L++ F+ FGTI
Sbjct: 244 LYVGRAQKKSERAAELKRRFEQLKMDRINRYQGVNLYVKNLDDSIDDERLRKEFTPFGTI 303
Query: 339 TSCKVMRDPSGISKGSGFVAFSTPEEASR 367
TS KVM D +G SKG GFV FS PEEA++
Sbjct: 304 TSAKVMTDSNGRSKGFGFVCFSAPEEATK 332
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 101/273 (36%), Positives = 160/273 (58%), Gaps = 15/273 (5%)
Query: 134 LHDTFSSFGNILSCKIATD-GSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGH 192
L + FSS G +LS ++ D + +S G+ +V F+ A+ A+D +N ++ + + +
Sbjct: 9 LFEKFSSAGPVLSIRVCRDLIARRSLGYAYVNFQQPVDAERALDTMNFDMVKGRPIRIMW 68
Query: 193 FLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFG 252
+R+ K+ NVF+KNLD+S ++ + F +G I S V D + SK +G
Sbjct: 69 ----SQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGNILSCKVATDEESNSKGYG 124
Query: 253 FVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGL 312
FV+FE + A A++ +NG + R+ +VGK +SERE++L + + M
Sbjct: 125 FVHFETEEAANNAIQKVNGMLLNGRKVFVGKFVPRSEREKQLGQKARRFM---------- 174
Query: 313 NLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEM 372
N+YIKN GD +DDEKL+E+F ++G ITS KVM D +G KG GFV+F PE A +A+ ++
Sbjct: 175 NVYIKNFGDDLDDEKLREMFEKYGKITSAKVMADETGKPKGFGFVSFEDPENAEKAVNDL 234
Query: 373 NGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
N K + K LYV AQ+K ER A L+ +F Q++
Sbjct: 235 NNKELNGKVLYVGRAQKKSERAAELKRRFEQLK 267
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 141/253 (55%), Gaps = 21/253 (8%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ +LD ++ + +YD FS G +LS +V D + S GYG+V++ A A+
Sbjct: 82 NVFIKNLDKSIDNKAMYDTFSAFGNILSCKVATDEES-NSKGYGFVHFETEEAANNAIQK 140
Query: 91 LNFTPLNNKSIRIM----YSHRDPSIRKSGTG--NIFIKNLDKSIDHKALHDTFSSFGNI 144
+N LN + + + S R+ + + N++IKN +D + L + F +G I
Sbjct: 141 VNGMLLNGRKVFVGKFVPRSEREKQLGQKARRFMNVYIKNFGDDLDDEKLREMFEKYGKI 200
Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAI 204
S K+ D +G+ KGFGFV FE+ E+A+ A++ LN +N K ++VG +K ER +
Sbjct: 201 TSAKVMADETGKPKGFGFVSFEDPENAEKAVNDLNNKELNGKVLYVGRAQKKSER-AAEL 259
Query: 205 KTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCF 251
K +F N++VKNLD+S DE L+K F +GTITSA VM D +G+SK F
Sbjct: 260 KRRFEQLKMDRINRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAKVMTDSNGRSKGF 319
Query: 252 GFVNFENADDAAK 264
GFV F ++A K
Sbjct: 320 GFVCFSAPEEATK 332
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
N++ +LYV +LD ++ D +L F+ G + S +V D S RS G+G+V ++ P +A
Sbjct: 272 NRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAKVMTD-SNGRSKGFGFVCFSAPEEA 330
Query: 85 AR 86
+
Sbjct: 331 TK 332
>gi|301764847|ref|XP_002917846.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Ailuropoda melanoleuca]
Length = 492
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/372 (52%), Positives = 267/372 (71%), Gaps = 6/372 (1%)
Query: 26 QFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAA 85
++ SLYVGDL +VT+ L+ FS VG VLS+R+CRDL TRRSLGY YVN+ ADA
Sbjct: 105 KYRQASLYVGDLSADVTEDLLFKKFSAVGPVLSIRICRDLVTRRSLGYAYVNFLKLADAQ 164
Query: 86 RALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNIL 145
+ALD +NF + K IR+M+S RD +RKSG GN+FIKNLDKSID+K L++ FS+FG IL
Sbjct: 165 KALDTMNFDMIKGKPIRLMWSQRDAYLRKSGIGNVFIKNLDKSIDNKTLYEHFSAFGKIL 224
Query: 146 SCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIK 205
S K+ +D G S+G+ FV F+N+ +A AI+++NG L+ D ++FVG F +++RE ++
Sbjct: 225 SSKVMSDDQG-SRGYAFVHFQNQNAADRAIEEMNGALLKDCRLFVGRFKNRKDREA-ELQ 282
Query: 206 TK---FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDA 262
K F NV+VKN + DE LK++F +YG S VM D GKSK FGFV+F++ + A
Sbjct: 283 NKVNEFTNVYVKNFGDDMDDERLKEVFSKYGKTLSVKVMTDSGGKSKGFGFVSFDSHEAA 342
Query: 263 AKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDS 322
KAVE +NGK + + +VG+AQKKSER+ ELK FEQ +E + QG+ LYIKNL D+
Sbjct: 343 KKAVEEMNGKDVNGQLLFVGRAQKKSERQAELKQMFEQLKQERFRRCQGMKLYIKNLDDT 402
Query: 323 IDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPL 382
IDDEKL FS FG+I+ K+MR+ G SKG G + FS+PEEA++A+AEMNG+++ SKPL
Sbjct: 403 IDDEKLWREFSSFGSISRVKIMRE-EGRSKGFGLICFSSPEEATKAMAEMNGRILGSKPL 461
Query: 383 YVAVAQRKEERR 394
Y+A+AQR ER+
Sbjct: 462 YIALAQRPXERK 473
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 106/288 (36%), Positives = 169/288 (58%), Gaps = 16/288 (5%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATD-GSGQSKGFGFVQFENKESAQNAIDK 177
++++ +L + L FS+ G +LS +I D + +S G+ +V F AQ A+D
Sbjct: 110 SLYVGDLSADVTEDLLFKKFSAVGPVLSIRICRDLVTRRSLGYAYVNFLKLADAQKALDT 169
Query: 178 LNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITS 237
+N +I K + L +R+ K+ NVF+KNLD+S ++ L + F +G I S
Sbjct: 170 MNFDMIKGKPIR----LMWSQRDAYLRKSGIGNVFIKNLDKSIDNKTLYEHFSAFGKILS 225
Query: 238 AVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQ 297
+ VM D G S+ + FV+F+N + A +A+E +NG D +VG+ + + +RE EL+ +
Sbjct: 226 SKVMSDDQG-SRGYAFVHFQNQNAADRAIEEMNGALLKDCRLFVGRFKNRKDREAELQNK 284
Query: 298 FEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFV 357
V++F N+Y+KN GD +DDE+LKE+FS++G S KVM D G SKG GFV
Sbjct: 285 --------VNEFT--NVYVKNFGDDMDDERLKEVFSKYGKTLSVKVMTDSGGKSKGFGFV 334
Query: 358 AFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
+F + E A +A+ EMNGK + + L+V AQ+K ER+A L+ F Q++
Sbjct: 335 SFDSHEAAKKAVEEMNGKDVNGQLLFVGRAQKKSERQAELKQMFEQLK 382
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 158/285 (55%), Gaps = 27/285 (9%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ +LD ++ + LY+ FS G++LS +V D R GY +V++ N A RA++
Sbjct: 198 NVFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQGSR--GYAFVHFQNQNAADRAIEE 255
Query: 91 LNFTPLNNKSIRIMYSH------RDPSIRKSGT--GNIFIKNLDKSIDHKALHDTFSSFG 142
+N L K R+ R+ ++ N+++KN +D + L + FS +G
Sbjct: 256 MNGALL--KDCRLFVGRFKNRKDREAELQNKVNEFTNVYVKNFGDDMDDERLKEVFSKYG 313
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 202
LS K+ TD G+SKGFGFV F++ E+A+ A++++NG +N + +FVG +K ER+
Sbjct: 314 KTLSVKVMTDSGGKSKGFGFVSFDSHEAAKKAVEEMNGKDVNGQLLFVGRAQKKSERQA- 372
Query: 203 AIKTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSK 249
+K F +++KNLD++ DE L + F +G+I+ +MR+ +G+SK
Sbjct: 373 ELKQMFEQLKQERFRRCQGMKLYIKNLDDTIDDEKLWREFSSFGSISRVKIMRE-EGRSK 431
Query: 250 CFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQEL 294
FG + F + ++A KA+ +NG+ + Y+ AQ+ ER+ L
Sbjct: 432 GFGLICFSSPEEATKAMAEMNGRILGSKPLYIALAQRPXERKNFL 476
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 104/211 (49%), Gaps = 26/211 (12%)
Query: 202 VAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD-GDGKSKCFGFVNFENAD 260
V K + +++V +L T++ L K F G + S + RD +S + +VNF
Sbjct: 102 VEAKYRQASLYVGDLSADVTEDLLFKKFSAVGPVLSIRICRDLVTRRSLGYAYVNFLKLA 161
Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKF---QGL-NLYI 316
DA KA++ +N FD +KG+ + M D + G+ N++I
Sbjct: 162 DAQKALDTMN---FD-----------------MIKGKPIRLMWSQRDAYLRKSGIGNVFI 201
Query: 317 KNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKM 376
KNL SID++ L E FS FG I S KVM D G S+G FV F A RA+ EMNG +
Sbjct: 202 KNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQG-SRGYAFVHFQNQNAADRAIEEMNGAL 260
Query: 377 IVSKPLYVAVAQRKEERRARLQAQFSQMRPV 407
+ L+V + +++R A LQ + ++ V
Sbjct: 261 LKDCRLFVGRFKNRKDREAELQNKVNEFTNV 291
>gi|395512247|ref|XP_003760354.1| PREDICTED: polyadenylate-binding protein 1 [Sarcophilus harrisii]
Length = 654
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/349 (56%), Positives = 263/349 (75%), Gaps = 8/349 (2%)
Query: 81 PADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSS 140
P + RALD +NF + K +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+
Sbjct: 82 PINRKRALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSA 141
Query: 141 FGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERE 200
FGNILSCK+ D +G SKG+GFV FE +E+A+ AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 142 FGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKERE 200
Query: 201 TV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFEN 258
A +F NV++KN E DE LK++FG++G S VM D GKSK FGFV+FE
Sbjct: 201 AELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFER 260
Query: 259 ADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKN 318
+DA KAV+ +NGK+ + ++ YVG+AQKK ER+ ELK +FEQ ++ + ++QG+NLY+KN
Sbjct: 261 HEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKN 320
Query: 319 LGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIV 378
L D IDDE+L++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++
Sbjct: 321 LDDGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVA 379
Query: 379 SKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVP-PRMPMYPPGPSG 426
+KPLYVA+AQRKEER+A L Q+ M+ +A +VP P + Y P PSG
Sbjct: 380 TKPLYVALAQRKEERQAHLTNQY--MQRMASVRAVPNPVINPYQP-PSG 425
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 114/291 (39%), Positives = 170/291 (58%), Gaps = 23/291 (7%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ +LD ++ + LYD FS G +LS +V D + S GYG+V++ A RA++
Sbjct: 120 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEK 177
Query: 91 LNFTPLNNKSIRI----MYSHRDPSI--RKSGTGNIFIKNLDKSIDHKALHDTFSSFGNI 144
+N LN++ + + R+ + R N++IKN + +D + L + F FG
Sbjct: 178 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPA 237
Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAI 204
LS K+ TD SG+SKGFGFV FE E AQ A+D++NG +N KQ++VG +K ER+T +
Sbjct: 238 LSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQT-EL 296
Query: 205 KTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCF 251
K KF N++VKNLD+ DE L+K F +GTITSA VM +G G+SK F
Sbjct: 297 KRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG-GRSKGF 355
Query: 252 GFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAM 302
GFV F + ++A KAV +NG+ + YV AQ+K ER+ L Q+ Q M
Sbjct: 356 GFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRM 406
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 107/197 (54%), Gaps = 22/197 (11%)
Query: 21 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYAN 80
GA +F T++Y+ + ++ D +L +LF + G LSV+V D S +S G+G+V++
Sbjct: 204 GARAKEF--TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESG-KSKGFGFVSFER 260
Query: 81 PADAARALDVLNFTPLNNKSIRIMYSHR-----------------DPSIRKSGTGNIFIK 123
DA +A+D +N LN K I + + + D R G N+++K
Sbjct: 261 HEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGV-NLYVK 319
Query: 124 NLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLI 183
NLD ID + L FS FG I S K+ +G G+SKGFGFV F + E A A+ ++NG ++
Sbjct: 320 NLDDGIDDERLRKEFSPFGTITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTEMNGRIV 378
Query: 184 NDKQVFVGHFLRKQERE 200
K ++V RK+ER+
Sbjct: 379 ATKPLYVALAQRKEERQ 395
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA+A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 562 PLTA--SMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPE 619
Query: 555 ALKAKVAEAMEVLRSVAQQQA 575
+L++KV EA+ VL++ ++A
Sbjct: 620 SLRSKVDEAVAVLQAHQAKEA 640
>gi|330938161|ref|XP_003305701.1| hypothetical protein PTT_18612 [Pyrenophora teres f. teres 0-1]
gi|311317207|gb|EFQ86241.1| hypothetical protein PTT_18612 [Pyrenophora teres f. teres 0-1]
Length = 749
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 186/339 (54%), Positives = 251/339 (74%), Gaps = 3/339 (0%)
Query: 10 AQMSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRR 69
AQ P +A + NQ + SLYVG+LD +VT++ L++LFS +GQV S+RVCRD TRR
Sbjct: 29 AQGEVPTPTSAAPAHNQN-SASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRR 87
Query: 70 SLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSI 129
SLGY YVNY + D +AL+ LN+T + K RIM+S RDP++RK+G GN+FIKNLD +I
Sbjct: 88 SLGYAYVNYNSSEDGEKALEELNYTVIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDHAI 147
Query: 130 DHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVF 189
D+KALHDTF++FGNILSCK+A D G SKG+GFV +E E+A NAI +NGML+N+K+VF
Sbjct: 148 DNKALHDTFAAFGNILSCKVAQDELGNSKGYGFVHYETAEAANNAIKHVNGMLLNEKKVF 207
Query: 190 VGHFLRKQERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGK 247
VGH + K+ER + +K F N++VKN+D +D+D + +F ++G ITSA + RD GK
Sbjct: 208 VGHHIPKKERMSKFEEMKANFTNIYVKNIDLDVSDDDFRDLFEKHGDITSASIARDDQGK 267
Query: 248 SKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVD 307
S+ FGFVN+ + A+ AV+ALN F ++ YVG+AQKK ERE+EL+ Q+E A E
Sbjct: 268 SRGFGFVNYIKHEAASAAVDALNDTDFRGQKLYVGRAQKKHEREEELRKQYEAARLEKQS 327
Query: 308 KFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRD 346
K+QG+NLYIKNL D +DDEKL+++F+ FGTITS KVMRD
Sbjct: 328 KYQGVNLYIKNLNDDVDDEKLRDMFTPFGTITSAKVMRD 366
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 152/293 (51%), Gaps = 21/293 (7%)
Query: 117 TGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAI 175
+ ++++ LD S+ L + FSS G + S ++ D + +S G+ +V + + E + A+
Sbjct: 47 SASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSSEDGEKAL 106
Query: 176 DKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTI 235
++LN +I K + +R+ KT NVF+KNLD + ++ L F +G I
Sbjct: 107 EELNYTVIKGKPCRI----MWSQRDPALRKTGQGNVFIKNLDHAIDNKALHDTFAAFGNI 162
Query: 236 TSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSERE---Q 292
S V +D G SK +GFV++E A+ A A++ +NG ++++ +VG K ER +
Sbjct: 163 LSCKVAQDELGNSKGYGFVHYETAEAANNAIKHVNGMLLNEKKVFVGHHIPKKERMSKFE 222
Query: 293 ELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISK 352
E+K F N+Y+KN+ + D+ ++LF + G ITS + RD G S+
Sbjct: 223 EMKANF-------------TNIYVKNIDLDVSDDDFRDLFEKHGDITSASIARDDQGKSR 269
Query: 353 GSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
G GFV + E AS A+ +N + LYV AQ+K ER L+ Q+ R
Sbjct: 270 GFGFVNYIKHEAASAAVDALNDTDFRGQKLYVGRAQKKHEREEELRKQYEAAR 322
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 52/78 (66%)
Query: 501 TALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKV 560
+AL A+P QQ+ +LGE+LYP + +++ + A K+TGMLLEMD +E+++L AL+AKV
Sbjct: 658 SALQGAAPGQQKQMLGEALYPKIAEMQPELAGKITGMLLEMDNSELINLTADEAALRAKV 717
Query: 561 AEAMEVLRSVAQQQANNP 578
EAM V + + P
Sbjct: 718 DEAMSVYDEYVKNKEGEP 735
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 42/51 (82%)
Query: 349 GISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQA 399
G SKG GFV FS P+EA++A+ EMN KMI +KPLYVA+AQRK+ R+ +L+A
Sbjct: 423 GKSKGFGFVCFSNPDEATKAVTEMNQKMIENKPLYVALAQRKDVRKNQLEA 473
>gi|296203566|ref|XP_002748951.1| PREDICTED: polyadenylate-binding protein 1 isoform 2 [Callithrix
jacchus]
Length = 604
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/399 (50%), Positives = 263/399 (65%), Gaps = 36/399 (9%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
TSLYVGDL +VT++ LY+ FS G +LS+RVCRD+ TRRS GY YVN+ +P DA RALD
Sbjct: 11 TSLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMFTRRSSGYAYVNFQHPKDAERALD 70
Query: 90 VLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKI 149
+NF +N KS+RIM+S RDPS+RKSG +
Sbjct: 71 TMNFDVINGKSVRIMWSQRDPSLRKSG--------------------------------V 98
Query: 150 ATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTK 207
D +G SKG+GFV FE +E+A+ AI+K+NGML+ND++VFVG F ++ERE A +
Sbjct: 99 VCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDQKVFVGRFKSRKEREAELGARAKE 157
Query: 208 FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVE 267
F NV+VKN E DE LK +FG++G S VM D GKSK FGFV+FE +DA KAV+
Sbjct: 158 FTNVYVKNFGEDMDDEHLKDLFGKFGPTLSVKVMTDERGKSKGFGFVSFERGEDAQKAVD 217
Query: 268 ALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEK 327
LNGK+ ++ YVG+AQKK ER+ ELK +FEQ ++ + ++QGLNLY+K L D IDDE+
Sbjct: 218 ELNGKELSGKQIYVGRAQKKVERQTELKRKFEQMKQDKITRYQGLNLYVKYLDDYIDDER 277
Query: 328 LKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 387
L++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNGK++ +KPLYVA+A
Sbjct: 278 LRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGKIVATKPLYVALA 336
Query: 388 QRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSG 426
QRKEER+A L + P P P PSG
Sbjct: 337 QRKEERQAHLTNEHMHRTASVRAVPNPASKPYQPAPPSG 375
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 104/197 (52%), Gaps = 22/197 (11%)
Query: 21 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYAN 80
GA +F T++YV + ++ D L DLF + G LSV+V D +S G+G+V++
Sbjct: 152 GARAKEF--TNVYVKNFGEDMDDEHLKDLFGKFGPTLSVKVMTD-ERGKSKGFGFVSFER 208
Query: 81 PADAARALDVLNFTPLNNKSIRIMYSHR-----------------DPSIRKSGTGNIFIK 123
DA +A+D LN L+ K I + + + D R G N+++K
Sbjct: 209 GEDAQKAVDELNGKELSGKQIYVGRAQKKVERQTELKRKFEQMKQDKITRYQGL-NLYVK 267
Query: 124 NLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLI 183
LD ID + L FS FG I S K+ +G G+SKGFGFV F + E A A+ ++NG ++
Sbjct: 268 YLDDYIDDERLRKEFSPFGTITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTEMNGKIV 326
Query: 184 NDKQVFVGHFLRKQERE 200
K ++V RK+ER+
Sbjct: 327 ATKPLYVALAQRKEERQ 343
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 58/77 (75%)
Query: 503 LANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAE 562
L +A+P+QQ+ +LGE L+PL++ A K+TGMLLEMD +E+LH+LESPE+L++KV E
Sbjct: 518 LVSAAPQQQKQMLGERLFPLIQARRPTLAGKITGMLLEMDNSELLHMLESPESLRSKVDE 577
Query: 563 AMEVLRSVAQQQANNPA 579
A+ VL++ ++A A
Sbjct: 578 AVAVLQAHQAKEAAQKA 594
Score = 46.2 bits (108), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Query: 302 MKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP-SGISKGSGFVAFS 360
M + + +LY+ +L + + L E FS G I S +V RD + S G +V F
Sbjct: 1 MNPSTPSYPMTSLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMFTRRSSGYAYVNFQ 60
Query: 361 TPEEASRALAEMNGKMIVSKPLYVAVAQR 389
P++A RAL MN +I K + + +QR
Sbjct: 61 HPKDAERALDTMNFDVINGKSVRIMWSQR 89
>gi|410956870|ref|XP_003985059.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Felis catus]
Length = 486
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/373 (52%), Positives = 267/373 (71%), Gaps = 6/373 (1%)
Query: 26 QFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAA 85
++ SLYVGDL +VT+ L+ FS VG VLS+R+CRDL TRRSLGY YVN+ ADA
Sbjct: 105 KYRQASLYVGDLHADVTEDLLFKKFSTVGPVLSIRICRDLVTRRSLGYAYVNFLKLADAQ 164
Query: 86 RALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNIL 145
RALD +NF + K IR+M+S RD +RKSG GN+FIKNLD+SID+K L++ FS+FG IL
Sbjct: 165 RALDTMNFDTIKGKPIRLMWSQRDAYLRKSGIGNVFIKNLDRSIDNKTLYEHFSAFGKIL 224
Query: 146 SCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIK 205
S K+ +D G S+G+ FV F+N+ +A AI+++NG L+ D ++FVG F +++RE ++
Sbjct: 225 SSKVMSDDQG-SRGYAFVHFQNQIAADRAIEEMNGALLKDCRLFVGRFKNRKDREA-ELR 282
Query: 206 TK---FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDA 262
K F NV++KN + DE LK++F +YG S VM D GKSK FGFV+F++ + A
Sbjct: 283 NKANEFTNVYIKNFGDDMDDERLKEVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDSHEAA 342
Query: 263 AKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDS 322
KAVE +NGK + + +VG+AQKKSER+ ELK FEQ +E + QG+ LYIKNL D+
Sbjct: 343 KKAVEEMNGKDINGQLLFVGRAQKKSERQAELKQVFEQLKQERFRRCQGMKLYIKNLDDT 402
Query: 323 IDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPL 382
IDDEKL FS FG+I+ K+MR+ G SKG G + FS+PEEA++A+AEMNG+++ SKPL
Sbjct: 403 IDDEKLWREFSSFGSISRVKIMRE-EGRSKGFGLICFSSPEEATKAMAEMNGRILGSKPL 461
Query: 383 YVAVAQRKEERRA 395
Y+A+AQ+ ER A
Sbjct: 462 YIALAQKPXERNA 474
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/288 (37%), Positives = 166/288 (57%), Gaps = 16/288 (5%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATD-GSGQSKGFGFVQFENKESAQNAIDK 177
++++ +L + L FS+ G +LS +I D + +S G+ +V F AQ A+D
Sbjct: 110 SLYVGDLHADVTEDLLFKKFSTVGPVLSIRICRDLVTRRSLGYAYVNFLKLADAQRALDT 169
Query: 178 LNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITS 237
+N I K + L +R+ K+ NVF+KNLD S ++ L + F +G I S
Sbjct: 170 MNFDTIKGKPIR----LMWSQRDAYLRKSGIGNVFIKNLDRSIDNKTLYEHFSAFGKILS 225
Query: 238 AVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQ 297
+ VM D G S+ + FV+F+N A +A+E +NG D +VG+ + + +RE EL+ +
Sbjct: 226 SKVMSDDQG-SRGYAFVHFQNQIAADRAIEEMNGALLKDCRLFVGRFKNRKDREAELRNK 284
Query: 298 FEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFV 357
++F N+YIKN GD +DDE+LKE+FS++G S KVM D SG SKG GFV
Sbjct: 285 --------ANEFT--NVYIKNFGDDMDDERLKEVFSKYGKTLSVKVMTDSSGKSKGFGFV 334
Query: 358 AFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
+F + E A +A+ EMNGK I + L+V AQ+K ER+A L+ F Q++
Sbjct: 335 SFDSHEAAKKAVEEMNGKDINGQLLFVGRAQKKSERQAELKQVFEQLK 382
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 106/214 (49%), Gaps = 26/214 (12%)
Query: 201 TVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD-GDGKSKCFGFVNFENA 259
VA K + +++V +L T++ L K F G + S + RD +S + +VNF
Sbjct: 101 NVAAKYRQASLYVGDLHADVTEDLLFKKFSTVGPVLSIRICRDLVTRRSLGYAYVNFLKL 160
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKF---QGL-NLY 315
DA +A++ +N FD +KG+ + M D + G+ N++
Sbjct: 161 ADAQRALDTMN---FD-----------------TIKGKPIRLMWSQRDAYLRKSGIGNVF 200
Query: 316 IKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGK 375
IKNL SID++ L E FS FG I S KVM D G S+G FV F A RA+ EMNG
Sbjct: 201 IKNLDRSIDNKTLYEHFSAFGKILSSKVMSDDQG-SRGYAFVHFQNQIAADRAIEEMNGA 259
Query: 376 MIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAM 409
++ L+V + +++R A L+ + ++ V +
Sbjct: 260 LLKDCRLFVGRFKNRKDREAELRNKANEFTNVYI 293
>gi|389629168|ref|XP_003712237.1| polyadenylate-binding protein [Magnaporthe oryzae 70-15]
gi|158514092|sp|A4QUF0.1|PABP_MAGO7 RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|351644569|gb|EHA52430.1| polyadenylate-binding protein [Magnaporthe oryzae 70-15]
gi|440469069|gb|ELQ38192.1| polyadenylate-binding protein [Magnaporthe oryzae Y34]
gi|440487573|gb|ELQ67355.1| polyadenylate-binding protein [Magnaporthe oryzae P131]
Length = 762
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 179/321 (55%), Positives = 248/321 (77%), Gaps = 3/321 (0%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVG+LD +VT++ L++LFSQ+G V S+RVCRD TRRSLGY YVNY AD +AL
Sbjct: 60 SASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTADGEKAL 119
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LN+T + + RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++FGNILSCK
Sbjct: 120 EELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCK 179
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKT 206
+A D +G SKG+GFV +E E+A AI +NGML+N+K+V+VGH + K++R++ +K
Sbjct: 180 VAQDENGNSKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKDRQSKFDEMKA 239
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGD-GKSKCFGFVNFENADDAAKA 265
F N++VKN++ TD++ + +F +YG +TS+ + RD + GKS+ FGFVNF + +DA+KA
Sbjct: 240 NFTNIYVKNINPEVTDDEFRTLFEKYGDVTSSSLARDQETGKSRGFGFVNFTSHEDASKA 299
Query: 266 VEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDD 325
V+ LN K+F + YVG+AQKK ERE+EL+ +E A +E K+QG+NLYIKNL D +DD
Sbjct: 300 VQELNEKEFHGQNLYVGRAQKKHEREEELRKSYEAARQEKASKYQGVNLYIKNLDDEVDD 359
Query: 326 EKLKELFSEFGTITSCKVMRD 346
EKL++LFSEFG ITS KVMRD
Sbjct: 360 EKLRQLFSEFGPITSAKVMRD 380
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 159/294 (54%), Gaps = 22/294 (7%)
Query: 117 TGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAI 175
+ ++++ LD S+ L + FS G++ S ++ D + +S G+ +V + + A+
Sbjct: 60 SASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTADGEKAL 119
Query: 176 DKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTI 235
++LN LI + + +R+ KT NVF+KNLD + ++ L F +G I
Sbjct: 120 EELNYTLIKGRPCRI----MWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNI 175
Query: 236 TSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQ--- 292
S V +D +G SK +GFV++E + A++A++ +NG ++++ YVG K +R+
Sbjct: 176 LSCKVAQDENGNSKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKDRQSKFD 235
Query: 293 ELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRD-PSGIS 351
E+K F N+Y+KN+ + D++ + LF ++G +TS + RD +G S
Sbjct: 236 EMKANF-------------TNIYVKNINPEVTDDEFRTLFEKYGDVTSSSLARDQETGKS 282
Query: 352 KGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
+G GFV F++ E+AS+A+ E+N K + LYV AQ+K ER L+ + R
Sbjct: 283 RGFGFVNFTSHEDASKAVQELNEKEFHGQNLYVGRAQKKHEREEELRKSYEAAR 336
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 99/341 (29%), Positives = 159/341 (46%), Gaps = 75/341 (21%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ +LD + + L+D F+ G +LS +V +D S GYG+V+Y A++A+
Sbjct: 150 NVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQD-ENGNSKGYGFVHYETDEAASQAIKH 208
Query: 91 LNFTPLNNKSIRIMYSHRDPSI--------RKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
+N LN K + + H P K+ NI++KN++ + F +G
Sbjct: 209 VNGMLLNEKKVYV--GHHIPKKDRQSKFDEMKANFTNIYVKNINPEVTDDEFRTLFEKYG 266
Query: 143 NILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
++ S +A D +G+S+GFGFV F + E A A+ +LN + + ++VG +K ERE
Sbjct: 267 DVTSSSLARDQETGKSRGFGFVNFTSHEDASKAVQELNEKEFHGQNLYVGRAQKKHEREE 326
Query: 202 ------------VAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG----- 244
A K + N+++KNLD+ DE L+++F E+G ITSA VMRD
Sbjct: 327 ELRKSYEAARQEKASKYQGVNLYIKNLDDEVDDEKLRQLFSEFGPITSAKVMRDSITEPG 386
Query: 245 -------------------------DGKSK-----------------CFGFVNFENADDA 262
D K + FGFV F N DDA
Sbjct: 387 EEGESKEGEESEKNKENKPEEKEGDDSKPEEKEGEDSKSKSKLGKSKGFGFVCFANPDDA 446
Query: 263 AKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMK 303
KAV +N + +++ YV AQ+K R K Q EQ+++
Sbjct: 447 TKAVAEMNQRMVNNKPLYVALAQRKDVR----KNQLEQSIQ 483
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 114/208 (54%), Gaps = 20/208 (9%)
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENADDAAKAVEA 268
+++V LD S T+ L ++F + G++ S V RD +S + +VN+ D KA+E
Sbjct: 62 SLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTADGEKALEE 121
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
LN R + +Q+ + A+++T QG N++IKNL +ID++ L
Sbjct: 122 LNYTLIKGRPCRIMWSQR------------DPALRKT---GQG-NVFIKNLDVAIDNKAL 165
Query: 329 KELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
+ F+ FG I SCKV +D +G SKG GFV + T E AS+A+ +NG ++ K +YV
Sbjct: 166 HDTFAAFGNILSCKVAQDENGNSKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHI 225
Query: 389 RKEERRAR---LQAQFSQMRPVAMGPSV 413
K++R+++ ++A F+ + + P V
Sbjct: 226 PKKDRQSKFDEMKANFTNIYVKNINPEV 253
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 52/78 (66%)
Query: 507 SPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEV 566
+P QQ+ +LGE+++P ++ + + A K+TGMLLEMD TE++ L+E+ AL++KV EA+ V
Sbjct: 676 NPGQQKQILGEAIFPKIQAIHPELAGKITGMLLEMDNTELVALVENDGALRSKVDEALAV 735
Query: 567 LRSVAQQQANNPADQLAS 584
+QQ + Q S
Sbjct: 736 YDDYVRQQGDGEGAQAPS 753
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 65/124 (52%), Gaps = 25/124 (20%)
Query: 355 GFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVP 414
GFV F+ P++A++A+AEMN +M+ +KPLYVA+AQRK+ R+ +L+ + M +
Sbjct: 436 GFVCFANPDDATKAVAEMNQRMVNNKPLYVALAQRKDVRKNQLEQSIQARNQLRMQQAA- 494
Query: 415 PRMPMYPPGPSGLGQQFLYGQAP----PAIIPPQMPPRGHAYRYPLGRNMQDFPFDMGAG 470
+G+ QQ++ QAP P P MPP G GR M P+ G
Sbjct: 495 --------AAAGMPQQYM--QAPVFYGPGSQPGFMPPAG-------GRGM---PYPQGGM 534
Query: 471 SMLP 474
M P
Sbjct: 535 PMQP 538
>gi|396492663|ref|XP_003843853.1| hypothetical protein LEMA_P015040.1 [Leptosphaeria maculans JN3]
gi|312220433|emb|CBY00374.1| hypothetical protein LEMA_P015040.1 [Leptosphaeria maculans JN3]
Length = 747
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 180/320 (56%), Positives = 243/320 (75%), Gaps = 2/320 (0%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVG+LD +VT++ L++LFS +GQV S+RVCRD TRRSLGY YVNY + D +AL
Sbjct: 46 SASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSSEDGEKAL 105
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LN+T + K RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++FGNILSCK
Sbjct: 106 EELNYTVIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDHAIDNKALHDTFAAFGNILSCK 165
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKT 206
+A D G SKG+GFV +E E+A NAI +NGML+N+K+VFVGH + K+ER + +K
Sbjct: 166 VAQDEHGNSKGYGFVHYETAEAANNAIKHVNGMLLNEKKVFVGHHIPKKERMSKFEEMKA 225
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
F N++VKN+D TD++ + +F ++G ITSA + RD GKS+ FGFVN+ + A+ AV
Sbjct: 226 NFTNIYVKNIDLDVTDDEFRDLFEKHGDITSASIARDDQGKSRGFGFVNYIKHEAASVAV 285
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
E LN +F ++ YVG+AQKK ERE+EL+ Q+E A E K+QG+NLYIKNL D +DDE
Sbjct: 286 ETLNDTEFHGQKLYVGRAQKKHEREEELRKQYEAARLEKQSKYQGVNLYIKNLNDDVDDE 345
Query: 327 KLKELFSEFGTITSCKVMRD 346
KL+++F+ FGTITS KVMRD
Sbjct: 346 KLRDMFTPFGTITSAKVMRD 365
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 153/293 (52%), Gaps = 21/293 (7%)
Query: 117 TGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAI 175
+ ++++ LD S+ L + FSS G + S ++ D + +S G+ +V + + E + A+
Sbjct: 46 SASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSSEDGEKAL 105
Query: 176 DKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTI 235
++LN +I K + +R+ KT NVF+KNLD + ++ L F +G I
Sbjct: 106 EELNYTVIKGKPCRI----MWSQRDPALRKTGQGNVFIKNLDHAIDNKALHDTFAAFGNI 161
Query: 236 TSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSERE---Q 292
S V +D G SK +GFV++E A+ A A++ +NG ++++ +VG K ER +
Sbjct: 162 LSCKVAQDEHGNSKGYGFVHYETAEAANNAIKHVNGMLLNEKKVFVGHHIPKKERMSKFE 221
Query: 293 ELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISK 352
E+K F N+Y+KN+ + D++ ++LF + G ITS + RD G S+
Sbjct: 222 EMKANF-------------TNIYVKNIDLDVTDDEFRDLFEKHGDITSASIARDDQGKSR 268
Query: 353 GSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
G GFV + E AS A+ +N + LYV AQ+K ER L+ Q+ R
Sbjct: 269 GFGFVNYIKHEAASVAVETLNDTEFHGQKLYVGRAQKKHEREEELRKQYEAAR 321
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 102/326 (31%), Positives = 146/326 (44%), Gaps = 83/326 (25%)
Query: 321 DSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSK 380
DS DD+K ++ G + K + G SKG GFV FS P+EA++A+ EMN KM+ K
Sbjct: 399 DSTDDKKED---TKAGDKVTIKGEKKILGKSKGFGFVCFSNPDEATKAVTEMNQKMLEGK 455
Query: 381 PLYVAVAQRKEERRARLQAQFSQMRPVAMGPS-------------VPPRMPM-YPPG--- 423
PLYVA+AQRK+ R+ +L+A + M P + PM +PPG
Sbjct: 456 PLYVALAQRKDVRKNQLEATIQARNQLRMQQQQQQQFGGIPQMFIAPGQQPMMFPPGGRG 515
Query: 424 ----PSGL-GQQFLYGQAPPAII-----------------------------PPQMPPRG 449
P+G+ GQQ G P + PP M P+
Sbjct: 516 QMPFPAGIPGQQGGRGAGFPGAMPGQQGGRGGPNAQQMPPMYMPPGMAPGAFPPYMNPQY 575
Query: 450 HAYRYPLGRNMQDFPFDMGAGSMLP-VPVDMGAGIPR--------------RDASVGQ-- 492
+ M G + +P +P AG+P R A G+
Sbjct: 576 LQLAQAAQQAMGGRGGRGGPMAPMPGMPQGQMAGVPGMRGGQGGFPPQGAGRGAPQGRGQ 635
Query: 493 -PMPITALST-----------ALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLE 540
PMP AL++A P QQ+ +LGE+LYP + +++ + A K+TGMLLE
Sbjct: 636 PPMPFPQGGRGAGGPGGVDMGALSSAPPGQQKQMLGEALYPKIHEMQPEFAGKITGMLLE 695
Query: 541 MDQTEVLHLLESPEALKAKVAEAMEV 566
MD +E+++L AL+AKV EAM V
Sbjct: 696 MDNSELINLTSDEAALRAKVEEAMSV 721
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 33/54 (61%)
Query: 246 GKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFE 299
GKSK FGFV F N D+A KAV +N K + + YV AQ+K R+ +L+ +
Sbjct: 424 GKSKGFGFVCFSNPDEATKAVTEMNQKMLEGKPLYVALAQRKDVRKNQLEATIQ 477
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 77/176 (43%), Gaps = 32/176 (18%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
+++ +LY+ +L+ +V D +L D+F+ G + S +V RD A PAD
Sbjct: 326 SKYQGVNLYIKNLNDDVDDEKLRDMFTPFGTITSAKVMRD--------------AMPADR 371
Query: 85 ARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNI 144
+ D + K + + ++ T DK D KA G+
Sbjct: 372 S---DSPSDKKEEEKDGKEESKETEGEAKEDSTD-------DKKEDTKA--------GDK 413
Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERE 200
++ K G+SKGFGFV F N + A A+ ++N ++ K ++V RK R+
Sbjct: 414 VTIKGEKKILGKSKGFGFVCFSNPDEATKAVTEMNQKMLEGKPLYVALAQRKDVRK 469
>gi|354498761|ref|XP_003511482.1| PREDICTED: polyadenylate-binding protein 1-like, partial
[Cricetulus griseus]
Length = 571
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 192/343 (55%), Positives = 251/343 (73%), Gaps = 4/343 (1%)
Query: 86 RALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNIL 145
RALD +NF + K +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FGNIL
Sbjct: 2 RALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNIL 61
Query: 146 SCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--A 203
SCK+ D +G SKG+GFV FE +E+A+ AI+K+NGML+ND++VFVG F ++ERE A
Sbjct: 62 SCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGA 120
Query: 204 IKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAA 263
+F NV++KN E DE LK +FG++G S VM D GKSK FGFV+FE +DA
Sbjct: 121 RAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQ 180
Query: 264 KAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSI 323
KAV+ +NGK+ + ++ YVG+AQKK ER+ ELK +FEQ ++ + ++QG+NLY+KNL D I
Sbjct: 181 KAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGI 240
Query: 324 DDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLY 383
DDE+L++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +KP Y
Sbjct: 241 DDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPFY 299
Query: 384 VAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSG 426
VA+AQRKEER+A L Q Q P P P PSG
Sbjct: 300 VALAQRKEERQAHLTNQHMQRMASVQAVPNPVINPYQPAPPSG 342
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 115/291 (39%), Positives = 170/291 (58%), Gaps = 23/291 (7%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ +LD ++ + LYD FS G +LS +V D + S GYG+V++ A RA++
Sbjct: 35 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEK 92
Query: 91 LNFTPLNNKSIRI----MYSHRDPSI--RKSGTGNIFIKNLDKSIDHKALHDTFSSFGNI 144
+N LN++ + + R+ + R N++IKN + +D + L D F FG
Sbjct: 93 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPA 152
Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAI 204
LS K+ TD SG+SKGFGFV FE E AQ A+D++NG +N KQ++VG +K ER+T +
Sbjct: 153 LSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQT-EL 211
Query: 205 KTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCF 251
K KF N++VKNLD+ DE L+K F +GTITSA VM +G G+SK F
Sbjct: 212 KRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG-GRSKGF 270
Query: 252 GFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAM 302
GFV F + ++A KAV +NG+ + +YV AQ+K ER+ L Q Q M
Sbjct: 271 GFVCFSSPEEATKAVTEMNGRIVATKPFYVALAQRKEERQAHLTNQHMQRM 321
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 106/197 (53%), Gaps = 22/197 (11%)
Query: 21 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYAN 80
GA +F T++Y+ + ++ D +L DLF + G LSV+V D S +S G+G+V++
Sbjct: 119 GARAKEF--TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESG-KSKGFGFVSFER 175
Query: 81 PADAARALDVLNFTPLNNKSIRIMYSHR-----------------DPSIRKSGTGNIFIK 123
DA +A+D +N LN K I + + + D R G N+++K
Sbjct: 176 HEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGV-NLYVK 234
Query: 124 NLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLI 183
NLD ID + L FS FG I S K+ +G G+SKGFGFV F + E A A+ ++NG ++
Sbjct: 235 NLDDGIDDERLRKEFSPFGTITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTEMNGRIV 293
Query: 184 NDKQVFVGHFLRKQERE 200
K +V RK+ER+
Sbjct: 294 ATKPFYVALAQRKEERQ 310
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 69/95 (72%), Gaps = 6/95 (6%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA+A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 479 PLTA--SMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPE 536
Query: 555 ALKAKVAEAMEVLRS----VAQQQANNPADQLASL 585
+L++KV EA+ VL++ A Q+A N A + S+
Sbjct: 537 SLRSKVDEAVAVLQAHQAKEAAQKAVNSAAGVPSV 571
>gi|444706057|gb|ELW47419.1| Polyadenylate-binding protein 1 [Tupaia chinensis]
Length = 636
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 192/345 (55%), Positives = 252/345 (73%), Gaps = 4/345 (1%)
Query: 84 AARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGN 143
A RALD +NF + K +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FGN
Sbjct: 65 AERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGN 124
Query: 144 ILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV- 202
ILSCK+ D +G SKG+GFV FE +E+A+ +K+NGML+ND++VFVG F ++ERE
Sbjct: 125 ILSCKVVCDENG-SKGYGFVHFETQEAAERVSEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 203 -AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADD 261
A +F NV++KN E DE LK +FG++G S VM D GKSK FGFV+FE +D
Sbjct: 184 GARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHED 243
Query: 262 AAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGD 321
A KAV+ +NGK+ + ++ YVG+AQKK ER+ ELK +FEQ ++ + ++QG+NLY+KNL D
Sbjct: 244 AQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDD 303
Query: 322 SIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKP 381
IDDE+L++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +KP
Sbjct: 304 GIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKP 362
Query: 382 LYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSG 426
LYVA+AQRKEER+A L Q+ Q P P P PSG
Sbjct: 363 LYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSG 407
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 114/291 (39%), Positives = 168/291 (57%), Gaps = 23/291 (7%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ +LD ++ + LYD FS G +LS +V D + S GYG+V++ A R +
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERVSEK 157
Query: 91 LNFTPLNNKSIRI----MYSHRDPSI--RKSGTGNIFIKNLDKSIDHKALHDTFSSFGNI 144
+N LN++ + + R+ + R N++IKN + +D + L D F FG
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPA 217
Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAI 204
LS K+ TD SG+SKGFGFV FE E AQ A+D++NG +N KQ++VG +K ER+T +
Sbjct: 218 LSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQT-EL 276
Query: 205 KTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCF 251
K KF N++VKNLD+ DE L+K F +GTITSA VM +G G+SK F
Sbjct: 277 KRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG-GRSKGF 335
Query: 252 GFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAM 302
GFV F + ++A KAV +NG+ + YV AQ+K ER+ L Q+ Q M
Sbjct: 336 GFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRM 386
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 107/197 (54%), Gaps = 22/197 (11%)
Query: 21 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYAN 80
GA +F T++Y+ + ++ D +L DLF + G LSV+V D S +S G+G+V++
Sbjct: 184 GARAKEF--TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESG-KSKGFGFVSFER 240
Query: 81 PADAARALDVLNFTPLNNKSIRIMYSHR-----------------DPSIRKSGTGNIFIK 123
DA +A+D +N LN K I + + + D R G N+++K
Sbjct: 241 HEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGV-NLYVK 299
Query: 124 NLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLI 183
NLD ID + L FS FG I S K+ +G G+SKGFGFV F + E A A+ ++NG ++
Sbjct: 300 NLDDGIDDERLRKEFSPFGTITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTEMNGRIV 358
Query: 184 NDKQVFVGHFLRKQERE 200
K ++V RK+ER+
Sbjct: 359 ATKPLYVALAQRKEERQ 375
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA+A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 544 PLTA--SMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPE 601
Query: 555 ALKAKVAEAMEVLRSVAQQQA 575
+L++KV EA+ VL++ ++A
Sbjct: 602 SLRSKVDEAVAVLQAHQAKEA 622
>gi|407920118|gb|EKG13336.1| hypothetical protein MPH_09618 [Macrophomina phaseolina MS6]
Length = 768
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 185/335 (55%), Positives = 252/335 (75%), Gaps = 4/335 (1%)
Query: 15 PNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYG 74
P +A S +Q + SLYVG+LD +VT++ L++LFS +GQV S+RVCRD TRRSLGY
Sbjct: 43 PTPTSAAPSAHQN-SASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYA 101
Query: 75 YVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKAL 134
YVNY + D +AL+ LN+T + K RIM+S RDP++RK+G GN+FIKNLD +ID+KAL
Sbjct: 102 YVNYNSSDDGEKALEELNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDGAIDNKAL 161
Query: 135 HDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFL 194
HDTF++FGNILSCK+A D +G SKG+GFV +E E+A NAI +NGML+N+K+VFVGH +
Sbjct: 162 HDTFAAFGNILSCKVAQDENGNSKGYGFVHYETAEAANNAIKAVNGMLLNEKKVFVGHHI 221
Query: 195 RKQERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGD-GKSKCF 251
K++R + +K F NV+VKN+D TD++ +++F +YG ITSA + D + GKS+ F
Sbjct: 222 PKKDRMSKFEEMKANFTNVYVKNIDLEVTDDEFRELFEKYGQITSASLAHDNETGKSRGF 281
Query: 252 GFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQG 311
GFVNF + AAKAV+ LN K + ++ YVG+AQKK ERE+EL+ Q+E A E K+QG
Sbjct: 282 GFVNFVKHESAAKAVDELNDKDWKGQKLYVGRAQKKHEREEELRKQYEAARAEKQSKYQG 341
Query: 312 LNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRD 346
+NLY+KNL D +DDEKL+++F+ FGTITS KVMRD
Sbjct: 342 VNLYVKNLHDDVDDEKLRDMFAPFGTITSAKVMRD 376
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 93/294 (31%), Positives = 159/294 (54%), Gaps = 22/294 (7%)
Query: 117 TGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAI 175
+ ++++ LD S+ L + FSS G + S ++ D + +S G+ +V + + + + A+
Sbjct: 56 SASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSSDDGEKAL 115
Query: 176 DKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTI 235
++LN LI K + +R+ KT NVF+KNLD + ++ L F +G I
Sbjct: 116 EELNYTLIKGKPCRI----MWSQRDPALRKTGQGNVFIKNLDGAIDNKALHDTFAAFGNI 171
Query: 236 TSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSERE---Q 292
S V +D +G SK +GFV++E A+ A A++A+NG ++++ +VG K +R +
Sbjct: 172 LSCKVAQDENGNSKGYGFVHYETAEAANNAIKAVNGMLLNEKKVFVGHHIPKKDRMSKFE 231
Query: 293 ELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRD-PSGIS 351
E+K F N+Y+KN+ + D++ +ELF ++G ITS + D +G S
Sbjct: 232 EMKANF-------------TNVYVKNIDLEVTDDEFRELFEKYGQITSASLAHDNETGKS 278
Query: 352 KGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
+G GFV F E A++A+ E+N K + LYV AQ+K ER L+ Q+ R
Sbjct: 279 RGFGFVNFVKHESAAKAVDELNDKDWKGQKLYVGRAQKKHEREEELRKQYEAAR 332
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 66/105 (62%), Gaps = 2/105 (1%)
Query: 482 GIPRRDASVGQ-PMPITALS-TALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLL 539
G P + GQ P P + +AL +A+P QQ+ +LGE+LYP + ++ + A K+TGMLL
Sbjct: 649 GFPSGRPAPGQAPTPGEGVDLSALQSAAPPQQKQMLGEALYPKIHAMQPELAGKITGMLL 708
Query: 540 EMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNPADQLAS 584
EMD TE+++L AL+AKV EAM V + Q + + P D+ A+
Sbjct: 709 EMDNTELINLTSDENALRAKVDEAMGVYQEYIQSKGDGPQDENAA 753
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 63/118 (53%), Gaps = 5/118 (4%)
Query: 349 GISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVA 408
G SKG GFV FS P+EA++A+ EMN KM+ KPLYVA+AQRK+ R+++L+A +
Sbjct: 440 GKSKGFGFVCFSNPDEATKAVTEMNQKMMNGKPLYVALAQRKDVRKSQLEATIQARNQIR 499
Query: 409 M-----GPSVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPPQMPPRGHAYRYPLGRNMQ 461
M +P + + P G GQQ G P MP G +P G MQ
Sbjct: 500 MQQAAAAAGMPTQQFVQPQMFFGPGQQPFMGGRGQMPFPQGMPAGGRGAGFPQGMPMQ 557
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 32/50 (64%)
Query: 246 GKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELK 295
GKSK FGFV F N D+A KAV +N K + + YV AQ+K R+ +L+
Sbjct: 440 GKSKGFGFVCFSNPDEATKAVTEMNQKMMNGKPLYVALAQRKDVRKSQLE 489
>gi|440638008|gb|ELR07927.1| hypothetical protein GMDG_02786 [Geomyces destructans 20631-21]
Length = 805
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/336 (53%), Positives = 249/336 (74%), Gaps = 3/336 (0%)
Query: 13 SGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLG 72
+GP A A+ Q + SLYVG+LD +VT++ L++LFSQ+G V S+RVCRD TRRSLG
Sbjct: 46 AGPTPTGAQAAHPQ-ASASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLG 104
Query: 73 YGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHK 132
Y YVNY D +AL+ LN+T + + RIM+S RDP++RK+G GN+FIKNLD +ID+K
Sbjct: 105 YAYVNYNTTIDGEKALEELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNK 164
Query: 133 ALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGH 192
ALHDTF++FGNILSCK+A D SG SKG+GFV +E E+A AI +NGML+N+K+VFVGH
Sbjct: 165 ALHDTFAAFGNILSCKVAQDESGNSKGYGFVHYETDEAASQAIKHVNGMLLNEKKVFVGH 224
Query: 193 FLRKQERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKC 250
+ K++R++ +K F N++VKN+ TD+ +++F ++G +TSA + RD GK++
Sbjct: 225 HIPKKDRQSKFEEMKANFTNIYVKNIPADATDDQFRELFEKFGDVTSASLARDEAGKNRG 284
Query: 251 FGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQ 310
FGFVNF N + A+ AV+ LNGK F ++ YVG+AQKK ERE+EL+ +E A E K+Q
Sbjct: 285 FGFVNFINHEHASAAVDELNGKDFMGQDLYVGRAQKKHEREEELRKSYEAARIEKASKYQ 344
Query: 311 GLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRD 346
G+NLY+KNL D +DDEKL+ELF+ +G ITS KVMRD
Sbjct: 345 GVNLYVKNLEDDVDDEKLRELFAPYGAITSAKVMRD 380
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 157/293 (53%), Gaps = 21/293 (7%)
Query: 117 TGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAI 175
+ ++++ LD S+ L + FS G++ S ++ D + +S G+ +V + + A+
Sbjct: 61 SASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTIDGEKAL 120
Query: 176 DKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTI 235
++LN LI + + +R+ KT NVF+KNLD + ++ L F +G I
Sbjct: 121 EELNYTLIKGRPCRI----MWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNI 176
Query: 236 TSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSERE---Q 292
S V +D G SK +GFV++E + A++A++ +NG ++++ +VG K +R+ +
Sbjct: 177 LSCKVAQDESGNSKGYGFVHYETDEAASQAIKHVNGMLLNEKKVFVGHHIPKKDRQSKFE 236
Query: 293 ELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISK 352
E+K F N+Y+KN+ D++ +ELF +FG +TS + RD +G ++
Sbjct: 237 EMKANF-------------TNIYVKNIPADATDDQFRELFEKFGDVTSASLARDEAGKNR 283
Query: 353 GSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
G GFV F E AS A+ E+NGK + + LYV AQ+K ER L+ + R
Sbjct: 284 GFGFVNFINHEHASAAVDELNGKDFMGQDLYVGRAQKKHEREEELRKSYEAAR 336
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 81/157 (51%), Gaps = 26/157 (16%)
Query: 417 MPMYPPGPSGLGQQFLYGQAPPAIIPPQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVP 476
+P PP +GL Q P P MPP+ + + GR M P AG P
Sbjct: 637 LPGMPPNMAGL-------QGVPG---PGMPPQAYRQQNNAGRGMPGRPGQ--AGGFPP-- 682
Query: 477 VDMGAGIPRRDASVGQ-PMP------ITALSTALANASPEQQRTLLGESLYPLVEQLERD 529
GA R + GQ P+P +AL L A P QQ+ LLGE+L+P ++ ++ +
Sbjct: 683 --QGA---RSTSQAGQAPVPGASQEGASALQAQLTTAPPAQQKQLLGEALFPKIQVMQPE 737
Query: 530 AAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEV 566
A K+TGMLLEMD E++ L+E +L+AKV EA+ V
Sbjct: 738 LAGKITGMLLEMDNAELVGLIEDESSLRAKVDEALTV 774
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 73/148 (49%), Gaps = 34/148 (22%)
Query: 349 GISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVA 408
G SKG GFV F+ P+EA++A+ EMN +M+ KPLYVA+AQRK+ R+++L+A +
Sbjct: 447 GKSKGFGFVCFNNPDEATKAVTEMNQRMVNGKPLYVALAQRKDVRKSQLEASIQARNQIR 506
Query: 409 MGPSVPPRMPMYPPGPSGLGQQFLYGQAP----PAIIPPQMPPRGHAYRYPLGRNMQDFP 464
M + +GL QQF+ QAP P P MPP
Sbjct: 507 MQQAA---------AAAGLPQQFI--QAPMFYGPGQQPGFMPPN---------------- 539
Query: 465 FDMGAGSMLPVPVDMGAGIPRRDASVGQ 492
G +P P+ G GIP + A GQ
Sbjct: 540 ---AGGRGMPFPLQQGMGIPAQGARPGQ 564
>gi|307095208|gb|ADN29910.1| poly A binding protein cytoplasmic 1 isoform 1-like protein
[Triatoma matogrossensis]
Length = 341
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/339 (57%), Positives = 257/339 (75%), Gaps = 4/339 (1%)
Query: 21 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYAN 80
G G + SLYVGDL +VT + L++ FS G VLS+RVC+D+ TRRSLGY YVN+
Sbjct: 4 GPGGPNYPMASLYVGDLHSDVTKAMLFEKFSSAGPVLSIRVCKDMITRRSLGYAYVNFQQ 63
Query: 81 PADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSS 140
PADA RALD +NF L + IRIM+S RDPS+RKSG GN+FIKNLDK+ID+KA++DTFS+
Sbjct: 64 PADAERALDTMNFDTLKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSA 123
Query: 141 FGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERE 200
FGNILSCK+A D SG SKG+GFV FE +E+A +IDK+NGML+N K+VFVG F+ ++ERE
Sbjct: 124 FGNILSCKVAQDESGSSKGYGFVHFETEEAATKSIDKVNGMLLNGKKVFVGKFIPRKERE 183
Query: 201 T-VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFEN 258
+ K K F NV+VKN E TD+ LK++F +YG ITS V+ + D KS+ FGFV FE+
Sbjct: 184 KELGEKAKLFTNVYVKNFGEDFTDDMLKEMFEKYGPITSHTVVVNKDQKSRGFGFVAFED 243
Query: 259 ADDAAKAVEALNGKK-FDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIK 317
+ A +AVE LNGK+ + ++ YVG+AQKK+ER+QELK +FEQ E ++++QG+NLY+K
Sbjct: 244 PEAAERAVEDLNGKEIIEGKQLYVGRAQKKAERQQELKRKFEQLKMERMNRYQGVNLYVK 303
Query: 318 NLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGF 356
NL D+IDDE+L++ FS FGTITS KVM + SKG GF
Sbjct: 304 NLDDTIDDERLRKEFSPFGTITSAKVMLEERR-SKGFGF 341
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 98/289 (33%), Positives = 165/289 (57%), Gaps = 16/289 (5%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDK 177
++++ +L + L + FSS G +LS ++ D + +S G+ +V F+ A+ A+D
Sbjct: 14 SLYVGDLHSDVTKAMLFEKFSSAGPVLSIRVCKDMITRRSLGYAYVNFQQPADAERALDT 73
Query: 178 LNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITS 237
+N + + + + +R+ K+ NVF+KNLD++ ++ + F +G I S
Sbjct: 74 MNFDTLKGRPIRIMW----SQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILS 129
Query: 238 AVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQ 297
V +D G SK +GFV+FE + A K+++ +NG + ++ +VGK + ERE+EL
Sbjct: 130 CKVAQDESGSSKGYGFVHFETEEAATKSIDKVNGMLLNGKKVFVGKFIPRKEREKELG-- 187
Query: 298 FEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFV 357
E+A T N+Y+KN G+ D+ LKE+F ++G ITS V+ + S+G GFV
Sbjct: 188 -EKAKLFT-------NVYVKNFGEDFTDDMLKEMFEKYGPITSHTVVVNKDQKSRGFGFV 239
Query: 358 AFSTPEEASRALAEMNGKMIVS-KPLYVAVAQRKEERRARLQAQFSQMR 405
AF PE A RA+ ++NGK I+ K LYV AQ+K ER+ L+ +F Q++
Sbjct: 240 AFEDPEAAERAVEDLNGKEIIEGKQLYVGRAQKKAERQQELKRKFEQLK 288
>gi|169622264|ref|XP_001804541.1| hypothetical protein SNOG_14351 [Phaeosphaeria nodorum SN15]
gi|187608896|sp|Q0U1G2.3|PABP_PHANO RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|160704734|gb|EAT78222.2| hypothetical protein SNOG_14351 [Phaeosphaeria nodorum SN15]
Length = 744
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 179/318 (56%), Positives = 242/318 (76%), Gaps = 2/318 (0%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVG+LD +VT++ L++LFS +GQV S+RVCRD TRRSLGY YVNY + D +AL
Sbjct: 47 SASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSSEDGEKAL 106
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LN+T + K RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++FGNILSCK
Sbjct: 107 EELNYTVIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDHAIDNKALHDTFAAFGNILSCK 166
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKT 206
+A D G SKG+GFV +E E+A NAI +NGML+N+K+VFVGH + K+ER + +K
Sbjct: 167 VAQDELGNSKGYGFVHYETAEAANNAIKHVNGMLLNEKKVFVGHHIPKKERMSKFEEMKA 226
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
F N++VKN+D TDED +++F ++G ITSA + RD GKS+ FGFVN+ + AA AV
Sbjct: 227 NFTNIYVKNIDLDVTDEDFRELFEKHGDITSASIARDDQGKSRGFGFVNYIRHEAAAVAV 286
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
+ LN +F ++ YVG+AQKK ERE+EL+ Q+E A E K+QG+NLYIKNL D +DDE
Sbjct: 287 DHLNDIEFKGQKLYVGRAQKKHEREEELRKQYEAARLEKQSKYQGVNLYIKNLNDDVDDE 346
Query: 327 KLKELFSEFGTITSCKVM 344
KL+++F+ FGTITS KV+
Sbjct: 347 KLRDMFTPFGTITSAKVI 364
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 152/293 (51%), Gaps = 21/293 (7%)
Query: 117 TGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAI 175
+ ++++ LD S+ L + FSS G + S ++ D + +S G+ +V + + E + A+
Sbjct: 47 SASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSSEDGEKAL 106
Query: 176 DKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTI 235
++LN +I K + +R+ KT NVF+KNLD + ++ L F +G I
Sbjct: 107 EELNYTVIKGKPCRI----MWSQRDPALRKTGQGNVFIKNLDHAIDNKALHDTFAAFGNI 162
Query: 236 TSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSERE---Q 292
S V +D G SK +GFV++E A+ A A++ +NG ++++ +VG K ER +
Sbjct: 163 LSCKVAQDELGNSKGYGFVHYETAEAANNAIKHVNGMLLNEKKVFVGHHIPKKERMSKFE 222
Query: 293 ELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISK 352
E+K F N+Y+KN+ + DE +ELF + G ITS + RD G S+
Sbjct: 223 EMKANF-------------TNIYVKNIDLDVTDEDFRELFEKHGDITSASIARDDQGKSR 269
Query: 353 GSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
G GFV + E A+ A+ +N + LYV AQ+K ER L+ Q+ R
Sbjct: 270 GFGFVNYIRHEAAAVAVDHLNDIEFKGQKLYVGRAQKKHEREEELRKQYEAAR 322
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 98/342 (28%), Positives = 158/342 (46%), Gaps = 76/342 (22%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ +LD + + L+D F+ G +LS +V +D S GYG+V+Y A A+
Sbjct: 137 NVFIKNLDHAIDNKALHDTFAAFGNILSCKVAQD-ELGNSKGYGFVHYETAEAANNAIKH 195
Query: 91 LNFTPLNNKSIRIMYSHRDPSIR--------KSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
+N LN K ++ H P K+ NI++KN+D + + + F G
Sbjct: 196 VNGMLLNEK--KVFVGHHIPKKERMSKFEEMKANFTNIYVKNIDLDVTDEDFRELFEKHG 253
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET- 201
+I S IA D G+S+GFGFV + E+A A+D LN + ++++VG +K ERE
Sbjct: 254 DITSASIARDDQGKSRGFGFVNYIRHEAAAVAVDHLNDIEFKGQKLYVGRAQKKHEREEE 313
Query: 202 ---------VAIKTKFN--NVFVKNLDESTTDEDLKKIFGEYGTITSAVVM--------- 241
+ ++K+ N+++KNL++ DE L+ +F +GTITSA V+
Sbjct: 314 LRKQYEAARLEKQSKYQGVNLYIKNLNDDVDDEKLRDMFTPFGTITSAKVILRDEEKKDE 373
Query: 242 ---------------------------------RDGD-----------GKSKCFGFVNFE 257
+ GD GKSK FGFV F
Sbjct: 374 EEKEVKEEKKEDEKKEDEEAKEGSSSEQNGEDTKAGDKVTIKGEKKILGKSKGFGFVCFS 433
Query: 258 NADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFE 299
N D+A KAV +N K + + YV AQ+K R+ +L+ +
Sbjct: 434 NPDEATKAVTEMNQKMIEGKPLYVALAQRKDVRKNQLEATIQ 475
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 52/92 (56%), Gaps = 14/92 (15%)
Query: 349 GISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVA 408
G SKG GFV FS P+EA++A+ EMN KMI KPLYVA+AQRK+ R+ +L+A +
Sbjct: 422 GKSKGFGFVCFSNPDEATKAVTEMNQKMIEGKPLYVALAQRKDVRKNQLEATIQARNQLR 481
Query: 409 MGPS-------------VPPRMP-MYPPGPSG 426
M P + P MYPPG G
Sbjct: 482 MQQQQQQQFGGIPQMFIAPGQQPMMYPPGARG 513
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 49/66 (74%)
Query: 501 TALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKV 560
+ L+ A+P QQ+ +LGE+LYP + +++ + A K+TGMLLEMD +E+++L AL+AKV
Sbjct: 653 SVLSAAAPGQQKQMLGEALYPKIHEMQPELAGKITGMLLEMDNSELINLTADESALRAKV 712
Query: 561 AEAMEV 566
EAM V
Sbjct: 713 DEAMSV 718
>gi|432107630|gb|ELK32863.1| Polyadenylate-binding protein 1 [Myotis davidii]
Length = 565
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/338 (55%), Positives = 249/338 (73%), Gaps = 4/338 (1%)
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF + K +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FGNILSCK+
Sbjct: 1 MNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVV 60
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTKF 208
D +G SKG+GFV FE +E+A+ AI+K+NGML+ND++VFVG F ++ERE A +F
Sbjct: 61 CDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEF 119
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NV++KN E DE LK +FG++G S VM D GKSK FGFV+FE +DA KAV+
Sbjct: 120 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 179
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
+NGK+ + ++ YVG+AQKK ER+ ELK +FEQ ++ + ++QG+NLY+KNL D IDDE+L
Sbjct: 180 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 239
Query: 329 KELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +KPLYVA+AQ
Sbjct: 240 RKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQ 298
Query: 389 RKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSG 426
RKEER+A L Q+ Q P P P PSG
Sbjct: 299 RKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSG 336
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 115/291 (39%), Positives = 170/291 (58%), Gaps = 23/291 (7%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ +LD ++ + LYD FS G +LS +V D + S GYG+V++ A RA++
Sbjct: 29 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEK 86
Query: 91 LNFTPLNNKSIRI----MYSHRDPSI--RKSGTGNIFIKNLDKSIDHKALHDTFSSFGNI 144
+N LN++ + + R+ + R N++IKN + +D + L D F FG
Sbjct: 87 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPA 146
Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAI 204
LS K+ TD SG+SKGFGFV FE E AQ A+D++NG +N KQ++VG +K ER+T +
Sbjct: 147 LSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQT-EL 205
Query: 205 KTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCF 251
K KF N++VKNLD+ DE L+K F +GTITSA VM +G G+SK F
Sbjct: 206 KRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG-GRSKGF 264
Query: 252 GFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAM 302
GFV F + ++A KAV +NG+ + YV AQ+K ER+ L Q+ Q M
Sbjct: 265 GFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRM 315
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 107/197 (54%), Gaps = 22/197 (11%)
Query: 21 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYAN 80
GA +F T++Y+ + ++ D +L DLF + G LSV+V D S +S G+G+V++
Sbjct: 113 GARAKEF--TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESG-KSKGFGFVSFER 169
Query: 81 PADAARALDVLNFTPLNNKSIRIMYSHR-----------------DPSIRKSGTGNIFIK 123
DA +A+D +N LN K I + + + D R G N+++K
Sbjct: 170 HEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGV-NLYVK 228
Query: 124 NLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLI 183
NLD ID + L FS FG I S K+ +G G+SKGFGFV F + E A A+ ++NG ++
Sbjct: 229 NLDDGIDDERLRKEFSPFGTITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTEMNGRIV 287
Query: 184 NDKQVFVGHFLRKQERE 200
K ++V RK+ER+
Sbjct: 288 ATKPLYVALAQRKEERQ 304
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA+A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 473 PLTA--SMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPE 530
Query: 555 ALKAKVAEAMEVLRSVAQQQA 575
+L++KV EA+ VL++ ++A
Sbjct: 531 SLRSKVDEAVAVLQAHQAKEA 551
>gi|338728570|ref|XP_001492678.3| PREDICTED: polyadenylate-binding protein 1 [Equus caballus]
Length = 565
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/338 (55%), Positives = 249/338 (73%), Gaps = 4/338 (1%)
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF + K +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FGNILSCK+
Sbjct: 1 MNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVV 60
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTKF 208
D +G SKG+GFV FE +E+A+ AI+K+NGML+ND++VFVG F ++ERE A +F
Sbjct: 61 CDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEF 119
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NV++KN E DE LK +FG++G S VM D GKSK FGFV+FE +DA KAV+
Sbjct: 120 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 179
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
+NGK+ + ++ YVG+AQKK ER+ ELK +FEQ ++ + ++QG+NLY+KNL D IDDE+L
Sbjct: 180 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 239
Query: 329 KELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +KPLYVA+AQ
Sbjct: 240 RKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQ 298
Query: 389 RKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSG 426
RKEER+A L Q+ Q P P P PSG
Sbjct: 299 RKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSG 336
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 115/291 (39%), Positives = 170/291 (58%), Gaps = 23/291 (7%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ +LD ++ + LYD FS G +LS +V D + S GYG+V++ A RA++
Sbjct: 29 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEK 86
Query: 91 LNFTPLNNKSIRI----MYSHRDPSI--RKSGTGNIFIKNLDKSIDHKALHDTFSSFGNI 144
+N LN++ + + R+ + R N++IKN + +D + L D F FG
Sbjct: 87 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPA 146
Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAI 204
LS K+ TD SG+SKGFGFV FE E AQ A+D++NG +N KQ++VG +K ER+T +
Sbjct: 147 LSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQT-EL 205
Query: 205 KTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCF 251
K KF N++VKNLD+ DE L+K F +GTITSA VM +G G+SK F
Sbjct: 206 KRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG-GRSKGF 264
Query: 252 GFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAM 302
GFV F + ++A KAV +NG+ + YV AQ+K ER+ L Q+ Q M
Sbjct: 265 GFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRM 315
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 107/197 (54%), Gaps = 22/197 (11%)
Query: 21 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYAN 80
GA +F T++Y+ + ++ D +L DLF + G LSV+V D S +S G+G+V++
Sbjct: 113 GARAKEF--TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESG-KSKGFGFVSFER 169
Query: 81 PADAARALDVLNFTPLNNKSIRIMYSHR-----------------DPSIRKSGTGNIFIK 123
DA +A+D +N LN K I + + + D R G N+++K
Sbjct: 170 HEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGV-NLYVK 228
Query: 124 NLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLI 183
NLD ID + L FS FG I S K+ +G G+SKGFGFV F + E A A+ ++NG ++
Sbjct: 229 NLDDGIDDERLRKEFSPFGTITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTEMNGRIV 287
Query: 184 NDKQVFVGHFLRKQERE 200
K ++V RK+ER+
Sbjct: 288 ATKPLYVALAQRKEERQ 304
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA+A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 473 PLTA--SMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPE 530
Query: 555 ALKAKVAEAMEVLRSVAQQQA 575
+L++KV EA+ VL++ ++A
Sbjct: 531 SLRSKVDEAVAVLQAHQAKEA 551
>gi|444721742|gb|ELW62457.1| Polyadenylate-binding protein 4-like protein [Tupaia chinensis]
Length = 370
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/367 (52%), Positives = 265/367 (72%), Gaps = 6/367 (1%)
Query: 26 QFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAA 85
++ SLYVGDL +VT+ L+ FS VG VLS+R+CRDL TRRSLGY YVN+ ADA
Sbjct: 6 KYRMASLYVGDLSADVTEDLLFKKFSTVGPVLSIRICRDLVTRRSLGYAYVNFLQLADAQ 65
Query: 86 RALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNIL 145
+ALD +NF + KSIR+M+S RD +RKSG GN+FIKNLD+SID+K L++ FS+FG IL
Sbjct: 66 KALDTMNFDMIKGKSIRLMWSQRDACLRKSGIGNVFIKNLDRSIDNKTLYEHFSAFGKIL 125
Query: 146 SCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIK 205
S K+ +D G SKG+ FV F+N+ +A AI+++NG L+ D +VFVG F +++RE ++
Sbjct: 126 SSKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGKLLKDCKVFVGRFKNRKDREA-ELR 183
Query: 206 TK---FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDA 262
K F NV++KN + DE L+++F +YG S VM D GKSK FGFV+F+N + A
Sbjct: 184 NKASEFTNVYIKNFGDDMDDERLREVFSKYGKTLSVKVMTDPSGKSKGFGFVSFDNHEAA 243
Query: 263 AKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDS 322
KAVE +NGK + + +VG+AQKK ER+ ELK FEQ +E + K QG+ LYIKNL D+
Sbjct: 244 QKAVEEMNGKDINGQLIFVGRAQKKVERQAELKQMFEQQKRERIRKCQGVKLYIKNLDDT 303
Query: 323 IDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPL 382
IDDEKL++ FS FG+I+ KVM++ G SKG G + FS+PEEA++A+ EMNG+++ SKPL
Sbjct: 304 IDDEKLRKEFSSFGSISRVKVMQEE-GQSKGFGLICFSSPEEATKAMTEMNGQILGSKPL 362
Query: 383 YVAVAQR 389
+A++Q+
Sbjct: 363 NIALSQK 369
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 108/289 (37%), Positives = 166/289 (57%), Gaps = 16/289 (5%)
Query: 118 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATD-GSGQSKGFGFVQFENKESAQNAID 176
++++ +L + L FS+ G +LS +I D + +S G+ +V F AQ A+D
Sbjct: 10 ASLYVGDLSADVTEDLLFKKFSTVGPVLSIRICRDLVTRRSLGYAYVNFLQLADAQKALD 69
Query: 177 KLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTIT 236
+N +I K + L +R+ K+ NVF+KNLD S ++ L + F +G I
Sbjct: 70 TMNFDMIKGKSIR----LMWSQRDACLRKSGIGNVFIKNLDRSIDNKTLYEHFSAFGKIL 125
Query: 237 SAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKG 296
S+ VM D G SK + FV+F+N A +A+E +NGK D + +VG+ + + +RE EL+
Sbjct: 126 SSKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGKLLKDCKVFVGRFKNRKDREAELRN 184
Query: 297 QFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGF 356
+ + N+YIKN GD +DDE+L+E+FS++G S KVM DPSG SKG GF
Sbjct: 185 KASEFT----------NVYIKNFGDDMDDERLREVFSKYGKTLSVKVMTDPSGKSKGFGF 234
Query: 357 VAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
V+F E A +A+ EMNGK I + ++V AQ+K ER+A L+ F Q +
Sbjct: 235 VSFDNHEAAQKAVEEMNGKDINGQLIFVGRAQKKVERQAELKQMFEQQK 283
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 107/211 (50%), Gaps = 24/211 (11%)
Query: 201 TVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD-GDGKSKCFGFVNFENA 259
V K + +++V +L T++ L K F G + S + RD +S + +VNF
Sbjct: 2 NVEAKYRMASLYVGDLSADVTEDLLFKKFSTVGPVLSIRICRDLVTRRSLGYAYVNFLQL 61
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQK--KSEREQELKGQFEQAMKETVDKFQGL-NLYI 316
DA KA++ +N FD GK+ + S+R+ L+ G+ N++I
Sbjct: 62 ADAQKALDTMN---FD---MIKGKSIRLMWSQRDACLRKS-------------GIGNVFI 102
Query: 317 KNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKM 376
KNL SID++ L E FS FG I S KVM D G SKG FV F A RA+ EMNGK+
Sbjct: 103 KNLDRSIDNKTLYEHFSAFGKILSSKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGKL 161
Query: 377 IVSKPLYVAVAQRKEERRARLQAQFSQMRPV 407
+ ++V + +++R A L+ + S+ V
Sbjct: 162 LKDCKVFVGRFKNRKDREAELRNKASEFTNV 192
>gi|326933139|ref|XP_003212666.1| PREDICTED: polyadenylate-binding protein 4-like [Meleagris
gallopavo]
Length = 636
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/322 (58%), Positives = 246/322 (76%), Gaps = 4/322 (1%)
Query: 84 AARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGN 143
A RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+FGN
Sbjct: 71 AERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGN 130
Query: 144 ILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET-V 202
ILSCK+ D +G SKG+ FV FE +++A AI+K+NGML+ND++VFVG F ++ERE +
Sbjct: 131 ILSCKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 189
Query: 203 AIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADD 261
K K F NV++KN + DE LK++F +YG S VM D GKSK FGFV+FE +D
Sbjct: 190 GAKAKEFTNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDPTGKSKGFGFVSFEKHED 249
Query: 262 AAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGD 321
A KAVE +NGK + + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL D
Sbjct: 250 ANKAVEEMNGKDINGKMVFVGRAQKKVERQAELKRRFEQLKQERISRYQGVNLYIKNLDD 309
Query: 322 SIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKP 381
+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ SKP
Sbjct: 310 TIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKP 368
Query: 382 LYVAVAQRKEERRARLQAQFSQ 403
LYVA+AQRKEER+A L Q+ Q
Sbjct: 369 LYVALAQRKEERKAHLTNQYMQ 390
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/289 (37%), Positives = 166/289 (57%), Gaps = 23/289 (7%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ +LD ++ + LYD FS G +LS +V D + S GY +V++ A RA++
Sbjct: 106 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYAFVHFETQDAADRAIEK 163
Query: 91 LNFTPLNNKSIRI-MYSHRDPSIRKSGT-----GNIFIKNLDKSIDHKALHDTFSSFGNI 144
+N LN++ + + + R + G N++IKN +D + L + FS +G
Sbjct: 164 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMDDERLKELFSKYGKT 223
Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAI 204
LS K+ TD +G+SKGFGFV FE E A A++++NG IN K VFVG +K ER+ +
Sbjct: 224 LSVKVMTDPTGKSKGFGFVSFEKHEDANKAVEEMNGKDINGKMVFVGRAQKKVERQ-AEL 282
Query: 205 KTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCF 251
K +F N+++KNLD++ DE L+K F +G+ITSA VM + DG+SK F
Sbjct: 283 KRRFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGF 341
Query: 252 GFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQ 300
GFV F + ++A KAV +NG+ + YV AQ+K ER+ L Q+ Q
Sbjct: 342 GFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAHLTNQYMQ 390
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 96/235 (40%), Positives = 145/235 (61%), Gaps = 15/235 (6%)
Query: 171 AQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFG 230
A+ A+D +N +I K + + +R+ K+ NVF+KNLD+S ++ L F
Sbjct: 71 AERALDTMNFDVIKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFS 126
Query: 231 EYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSER 290
+G I S V+ D +G SK + FV+FE D A +A+E +NG +DR+ +VG+ + + ER
Sbjct: 127 AFGNILSCKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKER 185
Query: 291 EQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGI 350
E EL + ++ N+YIKN GD +DDE+LKELFS++G S KVM DP+G
Sbjct: 186 EAELGAKAKEFT----------NVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDPTGK 235
Query: 351 SKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
SKG GFV+F E+A++A+ EMNGK I K ++V AQ+K ER+A L+ +F Q++
Sbjct: 236 SKGFGFVSFEKHEDANKAVEEMNGKDINGKMVFVGRAQKKVERQAELKRRFEQLK 290
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 108/196 (55%), Gaps = 20/196 (10%)
Query: 21 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYAN 80
GA +F T++Y+ + ++ D +L +LFS+ G+ LSV+V D T +S G+G+V++
Sbjct: 190 GAKAKEF--TNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTD-PTGKSKGFGFVSFEK 246
Query: 81 PADAARALDVLNFTPLNNKSI----------------RIMYSHRDPSIRKSGTGNIFIKN 124
DA +A++ +N +N K + R + I + N++IKN
Sbjct: 247 HEDANKAVEEMNGKDINGKMVFVGRAQKKVERQAELKRRFEQLKQERISRYQGVNLYIKN 306
Query: 125 LDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLIN 184
LD +ID + L FS FG+I S K+ + G+SKGFGFV F + E A A+ ++NG ++
Sbjct: 307 LDDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVG 365
Query: 185 DKQVFVGHFLRKQERE 200
K ++V RK+ER+
Sbjct: 366 SKPLYVALAQRKEERK 381
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 63/87 (72%), Gaps = 5/87 (5%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 546 PLTA--SMLAAAPPQEQKQMLGERLFPLIQAMHPSLAGKITGMLLEIDNSELLHMLESPE 603
Query: 555 ALKAKVAEAMEVLRSVAQQQANNPADQ 581
+L++KV EA+ VL++ QA A Q
Sbjct: 604 SLRSKVEEAVAVLQA---HQAKKEAAQ 627
>gi|449302325|gb|EMC98334.1| hypothetical protein BAUCODRAFT_86883 [Baudoinia compniacensis UAMH
10762]
Length = 802
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 180/341 (52%), Positives = 250/341 (73%), Gaps = 3/341 (0%)
Query: 15 PNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYG 74
P +A S + SLYVG+LD +VT++ L++LFS VGQV S+RVCRD TRRSLGY
Sbjct: 46 PTPTSAAPSTAHPNSASLYVGELDPSVTEAMLFELFSSVGQVASIRVCRDAVTRRSLGYA 105
Query: 75 YVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKAL 134
YVNY + D RAL+ LN+T + + RIM+S RDP++RK+G GN+FIKNLD +ID+KAL
Sbjct: 106 YVNYNSANDGERALEELNYTLIKGRPCRIMWSQRDPALRKTGHGNVFIKNLDGAIDNKAL 165
Query: 135 HDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFL 194
HDTF++FGNILSCK+A D G SKG+GFV +E E+A AI +NGML+N+K+VFVGH +
Sbjct: 166 HDTFAAFGNILSCKVAVDELGNSKGYGFVHYETAEAASQAIKSVNGMLLNEKKVFVGHHI 225
Query: 195 RKQERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGD-GKSKCF 251
K++R + +K F N++VKN++ TD++ +++F +YG ITSA + D + GKS+ F
Sbjct: 226 PKKDRMSKFEEMKANFTNIYVKNIETEVTDDEFRELFEKYGEITSASLAHDNETGKSRGF 285
Query: 252 GFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQG 311
GFVN+ N +DA KAV+ LN F ++ YVG+AQKK ERE+EL+ Q+E A +E K+QG
Sbjct: 286 GFVNYINHEDAYKAVDELNDSDFHGQKLYVGRAQKKHEREEELRKQYEAARQEKSAKYQG 345
Query: 312 LNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISK 352
+NLY+KNL D +DDE+L+++F +G ITS KVMRD + + K
Sbjct: 346 VNLYVKNLADEVDDEELRKIFEAYGAITSAKVMRDVTPLDK 386
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 46/73 (63%)
Query: 503 LANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAE 562
L A P QQ+ +LGE+LYP + + + A K+TGMLLEMD E+L L +AL+AKV E
Sbjct: 697 LNAAPPSQQKQILGEALYPKIHAQQPELAGKITGMLLEMDNHELLGLTTDDDALRAKVDE 756
Query: 563 AMEVLRSVAQQQA 575
AM V + Q+
Sbjct: 757 AMNVYEEYVKNQS 769
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 77/176 (43%), Gaps = 32/176 (18%)
Query: 26 QFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAA 85
++ +LYV +L V D +L +F G + S +V RD++ P D A
Sbjct: 342 KYQGVNLYVKNLADEVDDEELRKIFEAYGAITSAKVMRDVT--------------PLDKA 387
Query: 86 RALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNIL 145
N T K + +P+ K+G ++ L+K +D T +L
Sbjct: 388 ETDAKENKTDDKEKQV-----DGEPTEDKNGEEQEDMEELEKKMDTV----TIGGEKKVL 438
Query: 146 SCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
G+SKGFGFV F N + A A+ +LN +I+ K ++V RK+ R+T
Sbjct: 439 ---------GKSKGFGFVCFSNPDEATKAVTELNQKMIHGKPLYVALAQRKEVRKT 485
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 313 NLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP-SGISKGSGFVAFSTPEEASRALAE 371
+LY+ L S+ + L ELFS G + S +V RD + S G +V +++ + RAL E
Sbjct: 62 SLYVGELDPSVTEAMLFELFSSVGQVASIRVCRDAVTRRSLGYAYVNYNSANDGERALEE 121
Query: 372 MNGKMIVSKPLYVAVAQR 389
+N +I +P + +QR
Sbjct: 122 LNYTLIKGRPCRIMWSQR 139
>gi|38541222|gb|AAH62832.1| Pabpc1a protein, partial [Danio rerio]
Length = 327
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 185/316 (58%), Positives = 242/316 (76%), Gaps = 3/316 (0%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL +VT++ LY+ FS G +LS+RVCRD+ TRRSLGY YVN+ PADA RALD
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMMTRRSLGYAYVNFQQPADAERALDT 71
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF + + +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FGNILSCK+
Sbjct: 72 MNFDVIKGRPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVV 131
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTKF 208
D +G SKG+GFV FE E+A+ AI+K+NGML+ND++VFVG F ++ERE A +F
Sbjct: 132 CDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAEMGARAKEF 190
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NV++KN E DE LK+IF +YG S VM D GKSK FGFV+FE +DA +AV+
Sbjct: 191 TNVYIKNFGEDMDDEKLKEIFCKYGPALSIRVMTDDSGKSKGFGFVSFERHEDAQRAVDE 250
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
+NGK+ + ++ YVG+AQKK ER+ ELK +FEQ ++ + ++QG+NLY+KNL D +DDE+L
Sbjct: 251 MNGKEMNGKQVYVGRAQKKGERQTELKRKFEQMKQDRMTRYQGVNLYVKNLDDGLDDERL 310
Query: 329 KELFSEFGTITSCKVM 344
++ FS FGTITS KVM
Sbjct: 311 RKEFSPFGTITSAKVM 326
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 107/298 (35%), Positives = 173/298 (58%), Gaps = 16/298 (5%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFEN 167
+PS ++++ +L + L++ FS G ILS ++ D + +S G+ +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMMTRRSLGYAYVNFQQ 61
Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
A+ A+D +N +I + V + +R+ K+ N+F+KNLD+S ++ L
Sbjct: 62 PADAERALDTMNFDVIKGRPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYD 117
Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
F +G I S V+ D +G SK +GFV+FE + A +A+E +NG +DR+ +VG+ + +
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
ERE E+ + ++ N+YIKN G+ +DDEKLKE+F ++G S +VM D
Sbjct: 177 KEREAEMGARAKEF----------TNVYIKNFGEDMDDEKLKEIFCKYGPALSIRVMTDD 226
Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
SG SKG GFV+F E+A RA+ EMNGK + K +YV AQ+K ER+ L+ +F QM+
Sbjct: 227 SGKSKGFGFVSFERHEDAQRAVDEMNGKEMNGKQVYVGRAQKKGERQTELKRKFEQMK 284
>gi|453085206|gb|EMF13249.1| polyadenylate binding protein [Mycosphaerella populorum SO2202]
Length = 760
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 177/320 (55%), Positives = 243/320 (75%), Gaps = 2/320 (0%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVG+LD +VT++ L++LFS +GQV S+RVCRD TRRSLGY YVNY + D RAL
Sbjct: 52 SASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSANDGERAL 111
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LN+T + K RIM+S RDP++RK+G GNIFIKNLD +ID+KALHDTF++FGNILSCK
Sbjct: 112 EELNYTLIKGKPCRIMWSQRDPALRKTGHGNIFIKNLDAAIDNKALHDTFAAFGNILSCK 171
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKT 206
+A D SG S+G+GFV +E E+A AI +NGML+N+K+VFVGH + K++R + +K
Sbjct: 172 VAQDESGGSRGYGFVHYETAEAANAAIKSVNGMLLNEKKVFVGHHIPKKDRMSKFEEMKA 231
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
F N++VKN+D TTD++ +++F +YG ITSA + RD +GK + FGFVN+ +DA KAV
Sbjct: 232 NFTNIYVKNIDTETTDDEFRELFEKYGEITSASLARDQEGKVRGFGFVNYIRHEDANKAV 291
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
+ LN F ++ YVG+AQKK ERE+EL+ Q+E +E K+ G+NLY+KNL D IDDE
Sbjct: 292 DELNDIDFKSQKLYVGRAQKKHEREEELRRQYEAQRQEKSAKYMGVNLYVKNLADDIDDE 351
Query: 327 KLKELFSEFGTITSCKVMRD 346
+L+++F +G+ITS KVMRD
Sbjct: 352 ELRKVFEAYGSITSAKVMRD 371
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 158/300 (52%), Gaps = 21/300 (7%)
Query: 110 PSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENK 168
P+ + ++++ LD S+ L + FSS G + S ++ D + +S G+ +V + +
Sbjct: 45 PANANPNSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSA 104
Query: 169 ESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKI 228
+ A+++LN LI K + +R+ KT N+F+KNLD + ++ L
Sbjct: 105 NDGERALEELNYTLIKGKPCRI----MWSQRDPALRKTGHGNIFIKNLDAAIDNKALHDT 160
Query: 229 FGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKS 288
F +G I S V +D G S+ +GFV++E A+ A A++++NG ++++ +VG K
Sbjct: 161 FAAFGNILSCKVAQDESGGSRGYGFVHYETAEAANAAIKSVNGMLLNEKKVFVGHHIPKK 220
Query: 289 ERE---QELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMR 345
+R +E+K F N+Y+KN+ D++ +ELF ++G ITS + R
Sbjct: 221 DRMSKFEEMKANF-------------TNIYVKNIDTETTDDEFRELFEKYGEITSASLAR 267
Query: 346 DPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
D G +G GFV + E+A++A+ E+N S+ LYV AQ+K ER L+ Q+ R
Sbjct: 268 DQEGKVRGFGFVNYIRHEDANKAVDELNDIDFKSQKLYVGRAQKKHEREEELRRQYEAQR 327
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 156/345 (45%), Gaps = 80/345 (23%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ +LD + + L+D F+ G +LS +V +D S S GYG+V+Y A A+
Sbjct: 142 NIFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDESGG-SRGYGFVHYETAEAANAAIKS 200
Query: 91 LNFTPLNNKSIRIMYSHRDPSI--------RKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
+N LN K ++ H P K+ NI++KN+D + F +G
Sbjct: 201 VNGMLLNEK--KVFVGHHIPKKDRMSKFEEMKANFTNIYVKNIDTETTDDEFRELFEKYG 258
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 202
I S +A D G+ +GFGFV + E A A+D+LN + ++++VG +K ERE
Sbjct: 259 EITSASLARDQEGKVRGFGFVNYIRHEDANKAVDELNDIDFKSQKLYVGRAQKKHEREE- 317
Query: 203 AIKTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMR------- 242
++ ++ N++VKNL + DE+L+K+F YG+ITSA VMR
Sbjct: 318 ELRRQYEAQRQEKSAKYMGVNLYVKNLADDIDDEELRKVFEAYGSITSAKVMRDTTPADQ 377
Query: 243 ----------DGD--------------------------------------GKSKCFGFV 254
DG+ GKSK FGFV
Sbjct: 378 VENAEEEKKEDGENEAESSEEKKEDEKKEDGTEELTKKLDTVTIGGEKKVLGKSKGFGFV 437
Query: 255 NFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFE 299
F N D+A KAV LN K + YV AQ+K R+ +L+ +
Sbjct: 438 CFSNPDEATKAVTELNQKMIHGKPLYVALAQRKEVRKSQLEASIQ 482
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 43/68 (63%)
Query: 514 LLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQ 573
+LGE+LYP ++ + + A K+TGMLLEMD E+L L + +AL+ KV EA+ V +
Sbjct: 678 MLGEALYPKIQAQQPELAGKITGMLLEMDNEELLGLTTNDDALREKVQEALNVYDEYLKT 737
Query: 574 QANNPADQ 581
++ DQ
Sbjct: 738 HSSQAEDQ 745
>gi|414588969|tpg|DAA39540.1| TPA: hypothetical protein ZEAMMB73_983793 [Zea mays]
Length = 281
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 181/244 (74%), Positives = 217/244 (88%)
Query: 27 FLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAAR 86
F TSLYVGDL +V D+QL+D+FSQVG V+SVRVCRD+++R+SLGY YVNY N DAAR
Sbjct: 32 FPATSLYVGDLHESVQDAQLFDVFSQVGGVVSVRVCRDINSRKSLGYAYVNYNNQGDAAR 91
Query: 87 ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
AL++LNFTP+N K IRIMYS+RDPS RKSGTGNIFIKNLDKSID+KAL+DTF +FGNILS
Sbjct: 92 ALELLNFTPINGKPIRIMYSNRDPSSRKSGTGNIFIKNLDKSIDNKALYDTFCAFGNILS 151
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKT 206
CKIATD SG+S+G+GFVQFE ESAQ+AIDKLNGMLINDK+VFVG F+RKQ+RE V+
Sbjct: 152 CKIATDPSGESRGYGFVQFEKDESAQSAIDKLNGMLINDKKVFVGPFVRKQDRENVSSNI 211
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
KF+NV+VKNL ++ TD++LK++FG+YGTITSAVVMRD DGKS+CFGFVNFENAD AA+AV
Sbjct: 212 KFSNVYVKNLSDTVTDDELKEMFGKYGTITSAVVMRDSDGKSRCFGFVNFENADAAAQAV 271
Query: 267 EALN 270
+ LN
Sbjct: 272 QELN 275
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/261 (33%), Positives = 148/261 (56%), Gaps = 17/261 (6%)
Query: 120 IFIKNLDKSIDHKALHDTFSSFGNILSCKIATD-GSGQSKGFGFVQFENKESAQNAIDKL 178
+++ +L +S+ L D FS G ++S ++ D S +S G+ +V + N+ A A++ L
Sbjct: 37 LYVGDLHESVQDAQLFDVFSQVGGVVSVRVCRDINSRKSLGYAYVNYNNQGDAARALELL 96
Query: 179 NGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSA 238
N IN K + + + R+ + K+ N+F+KNLD+S ++ L F +G I S
Sbjct: 97 NFTPINGKPIRIMY----SNRDPSSRKSGTGNIFIKNLDKSIDNKALYDTFCAFGNILSC 152
Query: 239 VVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQF 298
+ D G+S+ +GFV FE + A A++ LNG +D++ +VG +K +RE
Sbjct: 153 KIATDPSGESRGYGFVQFEKDESAQSAIDKLNGMLINDKKVFVGPFVRKQDREN------ 206
Query: 299 EQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVA 358
+ + KF N+Y+KNL D++ D++LKE+F ++GTITS VMRD G S+ GFV
Sbjct: 207 ---VSSNI-KFS--NVYVKNLSDTVTDDELKEMFGKYGTITSAVVMRDSDGKSRCFGFVN 260
Query: 359 FSTPEEASRALAEMNGKMIVS 379
F + A++A+ E+N ++ S
Sbjct: 261 FENADAAAQAVQELNDGVVSS 281
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 95/184 (51%), Gaps = 17/184 (9%)
Query: 211 VFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDG-KSKCFGFVNFENADDAAKAVEAL 269
++V +L ES D L +F + G + S V RD + KS + +VN+ N DAA+A+E L
Sbjct: 37 LYVGDLHESVQDAQLFDVFSQVGGVVSVRVCRDINSRKSLGYAYVNYNNQGDAARALELL 96
Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLK 329
N + + + + + + G N++IKNL SID++ L
Sbjct: 97 NFTPINGKPIRIMYSNRDPSSRKSGTG----------------NIFIKNLDKSIDNKALY 140
Query: 330 ELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQR 389
+ F FG I SCK+ DPSG S+G GFV F E A A+ ++NG +I K ++V R
Sbjct: 141 DTFCAFGNILSCKIATDPSGESRGYGFVQFEKDESAQSAIDKLNGMLINDKKVFVGPFVR 200
Query: 390 KEER 393
K++R
Sbjct: 201 KQDR 204
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 309 FQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRD-PSGISKGSGFVAFSTPEEASR 367
F +LY+ +L +S+ D +L ++FS+ G + S +V RD S S G +V ++ +A+R
Sbjct: 32 FPATSLYVGDLHESVQDAQLFDVFSQVGGVVSVRVCRDINSRKSLGYAYVNYNNQGDAAR 91
Query: 368 ALAEMNGKMIVSKPLYVAVAQRKEERR 394
AL +N I KP+ + + R R
Sbjct: 92 ALELLNFTPINGKPIRIMYSNRDPSSR 118
>gi|452843390|gb|EME45325.1| hypothetical protein DOTSEDRAFT_71152 [Dothistroma septosporum
NZE10]
Length = 785
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 179/334 (53%), Positives = 244/334 (73%), Gaps = 2/334 (0%)
Query: 15 PNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYG 74
P +A S + SLYVG+LD +VT++ L++LFS +GQV S+RVCRD TRRSLGY
Sbjct: 41 PTPTSAAPSNANPNSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYA 100
Query: 75 YVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKAL 134
YVNY + D RAL+ LN+T + K RIM+S RDP++RK+G GN+FIKNLD +ID+KAL
Sbjct: 101 YVNYNSANDGERALEELNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDGAIDNKAL 160
Query: 135 HDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFL 194
HDTF++FGNILSCK+A D G SKG+GFV +E E+A +AI +NGML+N+K+VFVGH +
Sbjct: 161 HDTFAAFGNILSCKVAQDEHGNSKGYGFVHYETAEAANSAIKSVNGMLLNEKKVFVGHHI 220
Query: 195 RKQERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFG 252
K++R + +K F N++VKN+D TD++ + +F +YG ITSA + D +GKS+ FG
Sbjct: 221 PKKDRMSKFEEMKANFTNIYVKNIDPEATDDEFRALFEKYGDITSASLAHDQEGKSRGFG 280
Query: 253 FVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGL 312
FVN+ +DA KAVE LN F + YVG+AQKK ERE+EL+ Q+E +E K+QG+
Sbjct: 281 FVNYIRHEDANKAVEELNNSDFKGQALYVGRAQKKHEREEELRKQYEAQRQEKSAKYQGV 340
Query: 313 NLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRD 346
NLY+KNL D IDD++L+++F +G ITS KVMRD
Sbjct: 341 NLYVKNLADEIDDDELRKIFEPYGAITSAKVMRD 374
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 156/300 (52%), Gaps = 21/300 (7%)
Query: 110 PSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENK 168
PS + ++++ LD S+ L + FSS G + S ++ D + +S G+ +V + +
Sbjct: 48 PSNANPNSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSA 107
Query: 169 ESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKI 228
+ A+++LN LI K + +R+ KT NVF+KNLD + ++ L
Sbjct: 108 NDGERALEELNYTLIKGKPCRI----MWSQRDPALRKTGQGNVFIKNLDGAIDNKALHDT 163
Query: 229 FGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKS 288
F +G I S V +D G SK +GFV++E A+ A A++++NG ++++ +VG K
Sbjct: 164 FAAFGNILSCKVAQDEHGNSKGYGFVHYETAEAANSAIKSVNGMLLNEKKVFVGHHIPKK 223
Query: 289 ERE---QELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMR 345
+R +E+K F N+Y+KN+ D++ + LF ++G ITS +
Sbjct: 224 DRMSKFEEMKANF-------------TNIYVKNIDPEATDDEFRALFEKYGDITSASLAH 270
Query: 346 DPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
D G S+G GFV + E+A++A+ E+N + LYV AQ+K ER L+ Q+ R
Sbjct: 271 DQEGKSRGFGFVNYIRHEDANKAVEELNNSDFKGQALYVGRAQKKHEREEELRKQYEAQR 330
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 121/286 (42%), Gaps = 46/286 (16%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
T++YV ++D TD + LF + G + S + D + S G+G+VNY DA +A++
Sbjct: 237 TNIYVKNIDPEATDDEFRALFEKYGDITSASLAHDQEGK-SRGFGFVNYIRHEDANKAVE 295
Query: 90 VLNFTPLNNKSI---RIMYSH-RDPSIRKSGTG------------NIFIKNLDKSIDHKA 133
LN + +++ R H R+ +RK N+++KNL ID
Sbjct: 296 ELNNSDFKGQALYVGRAQKKHEREEELRKQYEAQRQEKSAKYQGVNLYVKNLADEIDDDE 355
Query: 134 LHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHF 193
L F +G I S K+ D E A + D+
Sbjct: 356 LRKIFEPYGAITSAKVMRD-----------TIPADEVAASKKDE---------------- 388
Query: 194 LRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGF 253
K + E + + + KN + + D++ + + TIT + GKSK FGF
Sbjct: 389 -EKSDEEKQSDDEEKKDEGDKNEEGEKKEGDVEDVIKKLDTITIGGEKKI-LGKSKGFGF 446
Query: 254 VNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFE 299
V F N D+A KAV LN K + YV AQ+K R+ +L+ +
Sbjct: 447 VCFSNPDEATKAVTELNQKMIHGKPLYVALAQRKEVRKSQLEASIQ 492
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 42/66 (63%)
Query: 501 TALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKV 560
AL A P QQ+ +LGE+LYP + + + A K+TGMLLEMD E++ L AL+ KV
Sbjct: 681 NALGQAPPSQQKQMLGEALYPKIHAQQPELAGKITGMLLEMDNEELIGLTGDDNALREKV 740
Query: 561 AEAMEV 566
EA+ V
Sbjct: 741 QEALNV 746
>gi|419961|pir||JN0573 polyadenylate-binding protein - fruit fly (Drosophila melanogaster)
Length = 598
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 207/371 (55%), Positives = 269/371 (72%), Gaps = 19/371 (5%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL +V +S L+D FS G V +RVCRD+ TRRSLGY YVN+ PADA RALD
Sbjct: 3 SLYVGDLPQDVNESGLFDKFSSAGPV--IRVCRDVITRRSLGYAYVNFQQPADAERALDT 60
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+N + NK IRIM+S RDPS+R+SG GN+FIKNLD++ +KA++DTFS+FGNILSCK+A
Sbjct: 61 MNL--VRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDRA--NKAIYDTFSAFGNILSCKVA 116
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNN 210
TD G SKG+GFV E E+A +IDK+NGML+N K+V+VG F+ ++E+E A F N
Sbjct: 117 TDEKGNSKGYGFVHTE--EAANTSIDKVNGMLLNGKKVYVGKFIPRKEQEEKA--KLFTN 172
Query: 211 VFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALN 270
V+VKN E DE LK+ F YG IT VM DGKSK FGFV FE + A AV+ALN
Sbjct: 173 VYVKNFTEDFDDEKLKEFFEPYGKITK--VMSKEDGKSKGFGFVAFETTEAAEAAVQALN 230
Query: 271 GKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKE 330
GK + + YV +AQKK+ER+QELK +FE+ +K+ +F G+NLY+KNL D+IDD++L+
Sbjct: 231 GKG-EGKSLYVARAQKKAERQQELKRKFEE-LKQKRHEF-GVNLYVKNLDDTIDDDRLRI 287
Query: 331 LFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRK 390
FS +G ITS KV D G SKG GFV F+ EA+ A+ E+NG+++ S LYVA+AQRK
Sbjct: 288 AFSPYGNITSAKV--DEEGRSKGFGFVCFNPESEATCAVTELNGRVVGS--LYVALAQRK 343
Query: 391 EERRARLQAQF 401
EER+A L +Q+
Sbjct: 344 EERKADLASQY 354
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/288 (33%), Positives = 155/288 (53%), Gaps = 30/288 (10%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILS-CKIATDGSGQSKGFGFVQFENKESAQNAIDK 177
++++ +L + ++ L D FSS G ++ C+ + +S G+ +V F+ A+ A+D
Sbjct: 3 SLYVGDLPQDVNESGLFDKFSSAGPVIRVCRDVI--TRRSLGYAYVNFQQPADAERALDT 60
Query: 178 LNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITS 237
+N L+ +K + + +R+ ++ NVF+KNLD + ++ + F +G I S
Sbjct: 61 MN--LVRNKPIRIMW----SQRDPSLRRSGVGNVFIKNLDRA--NKAIYDTFSAFGNILS 112
Query: 238 AVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQ 297
V D G SK +GFV+ E A A +++ +NG + ++ YVGK + E+E++ K
Sbjct: 113 CKVATDEKGNSKGYGFVHTEEA--ANTSIDKVNGMLLNGKKVYVGKFIPRKEQEEKAK-- 168
Query: 298 FEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFV 357
N+Y+KN + DDEKLKE F +G IT KVM G SKG GFV
Sbjct: 169 ------------LFTNVYVKNFTEDFDDEKLKEFFEPYGKIT--KVMSKEDGKSKGFGFV 214
Query: 358 AFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
AF T E A A+ +NGK K LYVA AQ+K ER+ L+ +F +++
Sbjct: 215 AFETTEAAEAAVQALNGKG-EGKSLYVARAQKKAERQQELKRKFEELK 261
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/285 (33%), Positives = 149/285 (52%), Gaps = 26/285 (9%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ +LD + +YD FS G +LS +V D S GYG+V+ A+ + +D
Sbjct: 87 NVFIKNLD--RANKAIYDTFSAFGNILSCKVATD-EKGNSKGYGFVHTEEAANTS--IDK 141
Query: 91 LNFTPLNNKSIRI--MYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+N LN K + + ++ + N+++KN + D + L + F +G I K
Sbjct: 142 VNGMLLNGKKVYVGKFIPRKEQEEKAKLFTNVYVKNFTEDFDDEKLKEFFEPYGKI--TK 199
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKF 208
+ + G+SKGFGFV FE E+A+ A+ LNG K ++V +K ER+ +K KF
Sbjct: 200 VMSKEDGKSKGFGFVAFETTEAAEAAVQALNGKG-EGKSLYVARAQKKAERQQ-ELKRKF 257
Query: 209 N-----------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFE 257
N++VKNLD++ D+ L+ F YG ITSA V D +G+SK FGFV F
Sbjct: 258 EELKQKRHEFGVNLYVKNLDDTIDDDRLRIAFSPYGNITSAKV--DEEGRSKGFGFVCFN 315
Query: 258 NADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAM 302
+A AV LNG+ YV AQ+K ER+ +L Q+ + M
Sbjct: 316 PESEATCAVTELNGRVVGS--LYVALAQRKEERKADLASQYMRHM 358
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 52/70 (74%), Gaps = 4/70 (5%)
Query: 499 LSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKA 558
+++ LANA P++Q+ GE LYP++E + + A K+TGMLLE++ +E+LH+ EALKA
Sbjct: 524 IASLLANAKPQEQKQ--GERLYPMIEHMHANLAGKITGMLLEIENSELLHM--DQEALKA 579
Query: 559 KVAEAMEVLR 568
KV EA+ VL+
Sbjct: 580 KVEEAVAVLQ 589
>gi|335293857|ref|XP_003357073.1| PREDICTED: polyadenylate-binding protein 4-like [Sus scrofa]
Length = 370
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/367 (51%), Positives = 265/367 (72%), Gaps = 6/367 (1%)
Query: 26 QFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAA 85
++ SLYVGDL +VT+ L+ FS VG VLS+R+CRDL TRRSLGY YVN+ ADA
Sbjct: 6 KYRQASLYVGDLHADVTEDLLFKKFSTVGPVLSIRICRDLVTRRSLGYAYVNFLQLADAQ 65
Query: 86 RALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNIL 145
+ALD +NF + KSIR+M+S RD +RKSG GN+FIKNLDKSID+K L++ FS+FG IL
Sbjct: 66 KALDTMNFDLIKGKSIRLMWSQRDAYLRKSGIGNVFIKNLDKSIDNKTLYEHFSAFGKIL 125
Query: 146 SCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIK 205
S K+ +D G S+G+ FV F+N+ +A AI+++NG L+ D ++FVG F +++RE ++
Sbjct: 126 SSKVMSDDQG-SRGYAFVHFQNQIAADRAIEEMNGALLKDCRLFVGRFKNRKDREA-ELQ 183
Query: 206 TK---FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDA 262
K F NV++KN + DE LK++F +YG S VMRD GKSK FGFV+F++ + A
Sbjct: 184 NKANEFTNVYIKNFGDDMDDERLKEVFSKYGKTLSVKVMRDSSGKSKGFGFVSFDSHEAA 243
Query: 263 AKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDS 322
KAVE +NGK + + +VG+AQKK+ER+ ELK FEQ +E + QG+ LYIKNL ++
Sbjct: 244 KKAVEEMNGKDINGQLLFVGRAQKKAERQAELKQMFEQLKRERFRRCQGVKLYIKNLDET 303
Query: 323 IDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPL 382
IDDEKL+ FS FG+I+ KVM++ G SKG G + FS+PEEA++A+ EMNG+++ SKPL
Sbjct: 304 IDDEKLRREFSSFGSISRVKVMQEE-GRSKGFGLICFSSPEEATKAMTEMNGRILGSKPL 362
Query: 383 YVAVAQR 389
+A+AQ+
Sbjct: 363 NIALAQK 369
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/289 (38%), Positives = 169/289 (58%), Gaps = 16/289 (5%)
Query: 118 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATD-GSGQSKGFGFVQFENKESAQNAID 176
++++ +L + L FS+ G +LS +I D + +S G+ +V F AQ A+D
Sbjct: 10 ASLYVGDLHADVTEDLLFKKFSTVGPVLSIRICRDLVTRRSLGYAYVNFLQLADAQKALD 69
Query: 177 KLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTIT 236
+N LI K + L +R+ K+ NVF+KNLD+S ++ L + F +G I
Sbjct: 70 TMNFDLIKGKSIR----LMWSQRDAYLRKSGIGNVFIKNLDKSIDNKTLYEHFSAFGKIL 125
Query: 237 SAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKG 296
S+ VM D G S+ + FV+F+N A +A+E +NG D +VG+ + + +RE EL+
Sbjct: 126 SSKVMSDDQG-SRGYAFVHFQNQIAADRAIEEMNGALLKDCRLFVGRFKNRKDREAELQN 184
Query: 297 QFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGF 356
+ ++F N+YIKN GD +DDE+LKE+FS++G S KVMRD SG SKG GF
Sbjct: 185 K--------ANEFT--NVYIKNFGDDMDDERLKEVFSKYGKTLSVKVMRDSSGKSKGFGF 234
Query: 357 VAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
V+F + E A +A+ EMNGK I + L+V AQ+K ER+A L+ F Q++
Sbjct: 235 VSFDSHEAAKKAVEEMNGKDINGQLLFVGRAQKKAERQAELKQMFEQLK 283
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 105/212 (49%), Gaps = 26/212 (12%)
Query: 201 TVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD-GDGKSKCFGFVNFENA 259
+A K + +++V +L T++ L K F G + S + RD +S + +VNF
Sbjct: 2 NIAAKYRQASLYVGDLHADVTEDLLFKKFSTVGPVLSIRICRDLVTRRSLGYAYVNFLQL 61
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKF---QGL-NLY 315
DA KA++ +N FD +KG+ + M D + G+ N++
Sbjct: 62 ADAQKALDTMN---FD-----------------LIKGKSIRLMWSQRDAYLRKSGIGNVF 101
Query: 316 IKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGK 375
IKNL SID++ L E FS FG I S KVM D G S+G FV F A RA+ EMNG
Sbjct: 102 IKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQG-SRGYAFVHFQNQIAADRAIEEMNGA 160
Query: 376 MIVSKPLYVAVAQRKEERRARLQAQFSQMRPV 407
++ L+V + +++R A LQ + ++ V
Sbjct: 161 LLKDCRLFVGRFKNRKDREAELQNKANEFTNV 192
>gi|344304706|gb|EGW34938.1| hypothetical protein SPAPADRAFT_58066 [Spathaspora passalidarum
NRRL Y-27907]
Length = 508
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 229/500 (45%), Positives = 313/500 (62%), Gaps = 55/500 (11%)
Query: 104 MYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFV 163
M+S RDPS R+SG GNIFIKNL +ID+KALHDTFS+FG ILSCK+ATD GQSK FGFV
Sbjct: 1 MWSQRDPSSRRSGDGNIFIKNLHPAIDNKALHDTFSAFGKILSCKVATDDMGQSKCFGFV 60
Query: 164 QFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTKFNNVFVKNLDESTT 221
+E E+A+ AI+ +NGML+ND++V+VG + K++RE+ +K + N++VKN+D +
Sbjct: 61 HYETAEAAEAAIENVNGMLLNDREVYVGKHISKKDRESKFEEMKANYTNIYVKNIDLEFS 120
Query: 222 DEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYV 281
DE+ +K+F +GTITS + +D DGKSK FGFVN+E + A KAVE LN K+ + ++ YV
Sbjct: 121 DEEFEKLFVPFGTITSIYLEKDQDGKSKGFGFVNYETHESAVKAVEELNDKEINGQKIYV 180
Query: 282 GKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSC 341
G+AQKK ER +ELK Q+E E + K+QG+NL++KNL DSID EKL+E F FG+ITS
Sbjct: 181 GRAQKKRERMEELKKQYESTRVERLSKYQGVNLFVKNLDDSIDSEKLEEEFKPFGSITSA 240
Query: 342 KVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQF 401
KVM D +G SKG GFV FS+PEEA++A+ EMN +MI+ KPLYVA+AQRK+ RR++L+ Q
Sbjct: 241 KVMVDEAGKSKGFGFVCFSSPEEATKAITEMNQRMILGKPLYVALAQRKDVRRSQLEQQI 300
Query: 402 S-----QMRPVAMGPSVPPRM--PMYPPGPSGLGQQFLY-----GQAP-PAIIPPQMPPR 448
+M+ A +P + PM+ GQQ + G AP P P M R
Sbjct: 301 QARNQMRMQNAAASGGIPGQFIPPMF------YGQQGFFPPNGRGNAPFPGPNPQMMMRR 354
Query: 449 GHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASV-GQPMPITA--------- 498
G + P + +P G PVPV GIP + GQPM
Sbjct: 355 GQQFPGP-----EQWPRPGPNGQ--PVPV---YGIPPQFQDFNGQPMRQQQRGGYYPNRN 404
Query: 499 ----------LSTALANASPEQQRTLLGESLYPLV----EQLERDAAAKVTGMLLEMDQT 544
L+ +ANA P+QQ+ +LGE LYP + + E +AA K+TGM+L ++
Sbjct: 405 QNKGGRQQKDLAAIIANAPPDQQKRILGEELYPKIVATGKAQEPEAAGKITGMMLGLENQ 464
Query: 545 EVLHLLESPEALKAKVAEAM 564
E+L LLE E +A+
Sbjct: 465 EILDLLEDDELFNNHFEDAL 484
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/287 (33%), Positives = 160/287 (55%), Gaps = 19/287 (6%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ +L + + L+D FS G++LS +V D +S +G+V+Y A A++
Sbjct: 16 NIFIKNLHPAIDNKALHDTFSAFGKILSCKVATD-DMGQSKCFGFVHYETAEAAEAAIEN 74
Query: 91 LNFTPLNNKSIRI--MYSHRDPSIR----KSGTGNIFIKNLDKSIDHKALHDTFSSFGNI 144
+N LN++ + + S +D + K+ NI++KN+D + F FG I
Sbjct: 75 VNGMLLNDREVYVGKHISKKDRESKFEEMKANYTNIYVKNIDLEFSDEEFEKLFVPFGTI 134
Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER----- 199
S + D G+SKGFGFV +E ESA A+++LN IN ++++VG +K+ER
Sbjct: 135 TSIYLEKDQDGKSKGFGFVNYETHESAVKAVEELNDKEINGQKIYVGRAQKKRERMEELK 194
Query: 200 ---ETVAIK--TKFN--NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFG 252
E+ ++ +K+ N+FVKNLD+S E L++ F +G+ITSA VM D GKSK FG
Sbjct: 195 KQYESTRVERLSKYQGVNLFVKNLDDSIDSEKLEEEFKPFGSITSAKVMVDEAGKSKGFG 254
Query: 253 FVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFE 299
FV F + ++A KA+ +N + + YV AQ+K R +L+ Q +
Sbjct: 255 FVCFSSPEEATKAITEMNQRMILGKPLYVALAQRKDVRRSQLEQQIQ 301
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 97/188 (51%), Gaps = 17/188 (9%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
T++YV ++D +D + LF G + S+ + +D + S G+G+VNY A +A++
Sbjct: 108 TNIYVKNIDLEFSDEEFEKLFVPFGTITSIYLEKDQDGK-SKGFGFVNYETHESAVKAVE 166
Query: 90 VLNFTPLNNKSIRI----------------MYSHRDPSIRKSGTGNIFIKNLDKSIDHKA 133
LN +N + I + S R + K N+F+KNLD SID +
Sbjct: 167 ELNDKEINGQKIYVGRAQKKRERMEELKKQYESTRVERLSKYQGVNLFVKNLDDSIDSEK 226
Query: 134 LHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHF 193
L + F FG+I S K+ D +G+SKGFGFV F + E A AI ++N +I K ++V
Sbjct: 227 LEEEFKPFGSITSAKVMVDEAGKSKGFGFVCFSSPEEATKAITEMNQRMILGKPLYVALA 286
Query: 194 LRKQERET 201
RK R +
Sbjct: 287 QRKDVRRS 294
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
+++ +L+V +LD ++ +L + F G + S +V D +S G+G+V +++P +A
Sbjct: 206 SKYQGVNLFVKNLDDSIDSEKLEEEFKPFGSITSAKVMVD-EAGKSKGFGFVCFSSPEEA 264
Query: 85 ARALDVLNFTPLNNKSIRIMYSHRDPSIRKS 115
+A+ +N + K + + + R +R+S
Sbjct: 265 TKAITEMNQRMILGKPLYVALAQRK-DVRRS 294
>gi|344257059|gb|EGW13163.1| Polyadenylate-binding protein 1 [Cricetulus griseus]
Length = 565
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 188/338 (55%), Positives = 247/338 (73%), Gaps = 4/338 (1%)
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF + K +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FGNILSCK+
Sbjct: 1 MNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVV 60
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTKF 208
D +G SKG+GFV FE +E+A+ AI+K+NGML+ND++VFVG F ++ERE A +F
Sbjct: 61 CDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEF 119
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NV++KN E DE LK +FG++G S VM D GKSK FGFV+FE +DA KAV+
Sbjct: 120 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 179
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
+NGK+ + ++ YVG+AQKK ER+ ELK +FEQ ++ + ++QG+NLY+KNL D IDDE+L
Sbjct: 180 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 239
Query: 329 KELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +KP YVA+AQ
Sbjct: 240 RKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPFYVALAQ 298
Query: 389 RKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSG 426
RKEER+A L Q Q P P P PSG
Sbjct: 299 RKEERQAHLTNQHMQRMASVQAVPNPVINPYQPAPPSG 336
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 115/291 (39%), Positives = 170/291 (58%), Gaps = 23/291 (7%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ +LD ++ + LYD FS G +LS +V D + S GYG+V++ A RA++
Sbjct: 29 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEK 86
Query: 91 LNFTPLNNKSIRI----MYSHRDPSI--RKSGTGNIFIKNLDKSIDHKALHDTFSSFGNI 144
+N LN++ + + R+ + R N++IKN + +D + L D F FG
Sbjct: 87 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPA 146
Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAI 204
LS K+ TD SG+SKGFGFV FE E AQ A+D++NG +N KQ++VG +K ER+T +
Sbjct: 147 LSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQT-EL 205
Query: 205 KTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCF 251
K KF N++VKNLD+ DE L+K F +GTITSA VM +G G+SK F
Sbjct: 206 KRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG-GRSKGF 264
Query: 252 GFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAM 302
GFV F + ++A KAV +NG+ + +YV AQ+K ER+ L Q Q M
Sbjct: 265 GFVCFSSPEEATKAVTEMNGRIVATKPFYVALAQRKEERQAHLTNQHMQRM 315
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 106/197 (53%), Gaps = 22/197 (11%)
Query: 21 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYAN 80
GA +F T++Y+ + ++ D +L DLF + G LSV+V D S +S G+G+V++
Sbjct: 113 GARAKEF--TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESG-KSKGFGFVSFER 169
Query: 81 PADAARALDVLNFTPLNNKSIRIMYSHR-----------------DPSIRKSGTGNIFIK 123
DA +A+D +N LN K I + + + D R G N+++K
Sbjct: 170 HEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGV-NLYVK 228
Query: 124 NLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLI 183
NLD ID + L FS FG I S K+ +G G+SKGFGFV F + E A A+ ++NG ++
Sbjct: 229 NLDDGIDDERLRKEFSPFGTITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTEMNGRIV 287
Query: 184 NDKQVFVGHFLRKQERE 200
K +V RK+ER+
Sbjct: 288 ATKPFYVALAQRKEERQ 304
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 69/95 (72%), Gaps = 6/95 (6%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA+A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 473 PLTA--SMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPE 530
Query: 555 ALKAKVAEAMEVLRS----VAQQQANNPADQLASL 585
+L++KV EA+ VL++ A Q+A N A + S+
Sbjct: 531 SLRSKVDEAVAVLQAHQAKEAAQKAVNSAAGVPSV 565
>gi|338722679|ref|XP_001915947.2| PREDICTED: LOW QUALITY PROTEIN: poly(A) binding protein,
cytoplasmic 4-like [Equus caballus]
Length = 397
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/366 (51%), Positives = 262/366 (71%), Gaps = 6/366 (1%)
Query: 26 QFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAA 85
++ SLYVGDL +VT+ L+ FS VG VLS+R+CRDL TRRSLGY YVN+ ADA
Sbjct: 6 KYRQASLYVGDLHADVTEDLLFKKFSTVGPVLSIRICRDLVTRRSLGYAYVNFLQLADAQ 65
Query: 86 RALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNIL 145
+ALD +NF + KSIR+M+S RD +RKSG GN+FIKNLDKSID+K L++ FS+FG IL
Sbjct: 66 KALDTMNFDTIKGKSIRLMWSQRDAYLRKSGIGNVFIKNLDKSIDNKTLYEHFSAFGKIL 125
Query: 146 SCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIK 205
S K+ +D G S+G+ FV F+N+ +A AI+++NG L+ D ++FVG F +Q+RE ++
Sbjct: 126 SSKVMSDDQG-SRGYAFVHFQNQMAADRAIEEMNGALLKDCRLFVGRFKNRQDREA-ELQ 183
Query: 206 TK---FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDA 262
K F N+++KN + D+ L+++F +YG S VM D GKSK FGFV+F + + A
Sbjct: 184 NKANEFTNIYIKNFGDDMDDKRLEEVFSKYGKTVSVKVMTDSTGKSKGFGFVSFYSHEAA 243
Query: 263 AKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDS 322
KAVE +NGK + + +VG+AQKK+ER+ ELK FEQ +E + QG+ LYIKNL D+
Sbjct: 244 QKAVEEMNGKDINGQLLFVGRAQKKAERQAELKQMFEQQKQERFRRCQGVKLYIKNLDDT 303
Query: 323 IDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPL 382
IDDEKL+ FS FG+I+ KVM++ G SKG G + FS+PEEA+RA+ EMNG+++ SKPL
Sbjct: 304 IDDEKLRREFSSFGSISRVKVMKEE-GRSKGFGLICFSSPEEATRAMTEMNGRILGSKPL 362
Query: 383 YVAVAQ 388
+A+AQ
Sbjct: 363 NIALAQ 368
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/289 (36%), Positives = 166/289 (57%), Gaps = 16/289 (5%)
Query: 118 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATD-GSGQSKGFGFVQFENKESAQNAID 176
++++ +L + L FS+ G +LS +I D + +S G+ +V F AQ A+D
Sbjct: 10 ASLYVGDLHADVTEDLLFKKFSTVGPVLSIRICRDLVTRRSLGYAYVNFLQLADAQKALD 69
Query: 177 KLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTIT 236
+N I K + L +R+ K+ NVF+KNLD+S ++ L + F +G I
Sbjct: 70 TMNFDTIKGKSIR----LMWSQRDAYLRKSGIGNVFIKNLDKSIDNKTLYEHFSAFGKIL 125
Query: 237 SAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKG 296
S+ VM D G S+ + FV+F+N A +A+E +NG D +VG+ + + +RE EL+
Sbjct: 126 SSKVMSDDQG-SRGYAFVHFQNQMAADRAIEEMNGALLKDCRLFVGRFKNRQDREAELQN 184
Query: 297 QFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGF 356
+ ++F N+YIKN GD +DD++L+E+FS++G S KVM D +G SKG GF
Sbjct: 185 K--------ANEFT--NIYIKNFGDDMDDKRLEEVFSKYGKTVSVKVMTDSTGKSKGFGF 234
Query: 357 VAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
V+F + E A +A+ EMNGK I + L+V AQ+K ER+A L+ F Q +
Sbjct: 235 VSFYSHEAAQKAVEEMNGKDINGQLLFVGRAQKKAERQAELKQMFEQQK 283
>gi|296226907|ref|XP_002759113.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1
[Callithrix jacchus]
Length = 604
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/383 (49%), Positives = 257/383 (67%), Gaps = 36/383 (9%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
S + SLYVGDL VT++ L++ FS G +LS+RVCRD+ T RSLGY YVN+ PA
Sbjct: 4 STPSYPMASLYVGDLHPYVTEAMLFEKFSPAGPILSIRVCRDMITHRSLGYAYVNFQQPA 63
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
DA RALD +NF + K +RIM+S RDPS+RKSG
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSG-------------------------- 97
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 202
+ D +G KG+GFV FE +E+A+ AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 98 ------VVCDENG-PKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGPFKSRKEREAE 150
Query: 203 --AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
A +F NV++KN E DE LK +FG++G S VM D GKSK FGFV+FE +
Sbjct: 151 LGARAKEFTNVYIKNFGEDMDDEHLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHE 210
Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
DA KAV+ +NGK+ + ++ YVG+AQKK ER+ ELK +FEQ ++ + ++QG+NLY+KNL
Sbjct: 211 DAQKAVDVMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLD 270
Query: 321 DSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSK 380
D IDDE+L++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +K
Sbjct: 271 DGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATK 329
Query: 381 PLYVAVAQRKEERRARLQAQFSQ 403
PLYVA+AQRKEER+A L + Q
Sbjct: 330 PLYVALAQRKEERQAHLTNLYMQ 352
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 107/197 (54%), Gaps = 22/197 (11%)
Query: 21 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYAN 80
GA +F T++Y+ + ++ D L DLF + G LSV+V D S + S G+G+V++
Sbjct: 152 GARAKEF--TNVYIKNFGEDMDDEHLKDLFGKFGPALSVKVMTDESGK-SKGFGFVSFER 208
Query: 81 PADAARALDVLNFTPLNNKSIRIMYSHR-----------------DPSIRKSGTGNIFIK 123
DA +A+DV+N LN K I + + + D R G N+++K
Sbjct: 209 HEDAQKAVDVMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGV-NLYVK 267
Query: 124 NLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLI 183
NLD ID + L FS FG I S K+ +G G+SKGFGFV F + E A A+ ++NG ++
Sbjct: 268 NLDDGIDDERLRKEFSPFGTITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTEMNGRIV 326
Query: 184 NDKQVFVGHFLRKQERE 200
K ++V RK+ER+
Sbjct: 327 ATKPLYVALAQRKEERQ 343
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 60/75 (80%), Gaps = 2/75 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA+A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 512 PLTA--SMLASAPPQEQKQMLGEWLFPLIQAMHPSLAGKITGMLLEIDNSELLHILESPE 569
Query: 555 ALKAKVAEAMEVLRS 569
+L++KV EA+ VL++
Sbjct: 570 SLRSKVDEAVAVLQA 584
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Query: 302 MKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRD-PSGISKGSGFVAFS 360
M + + +LY+ +L + + L E FS G I S +V RD + S G +V F
Sbjct: 1 MNPSTPSYPMASLYVGDLHPYVTEAMLFEKFSPAGPILSIRVCRDMITHRSLGYAYVNFQ 60
Query: 361 TPEEASRALAEMNGKMIVSKPLYVAVAQR 389
P +A RAL MN +I KP+ + +QR
Sbjct: 61 QPADAERALDTMNFDVIKGKPVRIMWSQR 89
>gi|428673176|gb|EKX74089.1| polyadenylate-binding protein, putative [Babesia equi]
Length = 663
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/382 (50%), Positives = 267/382 (69%), Gaps = 7/382 (1%)
Query: 21 GASGNQFL--TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNY 78
G NQ L + SLYVGDL +VT++ LY++F+ VG V S+RVCRD TR+SLGY YVNY
Sbjct: 20 GLRDNQQLYNSASLYVGDLQPDVTEAILYEVFNSVGPVSSIRVCRDSITRKSLGYAYVNY 79
Query: 79 ANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTF 138
+ DA AL+ LN+ + RIM+S++DP++RKSG GNIF+KNLD+SID KA +DTF
Sbjct: 80 YSVQDAEAALESLNYIDIKGHPTRIMWSNKDPTLRKSGAGNIFVKNLDRSIDTKAFYDTF 139
Query: 139 SSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQE 198
S FG ILSCK+A D +G SKG+GFV ++ +ESA+ AI+K+NGM+I K+V V F++KQ+
Sbjct: 140 SHFGPILSCKVAMDENGVSKGYGFVHYDTEESAKEAIEKVNGMVIGGKKVEVSPFIKKQD 199
Query: 199 RETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFEN 258
R+ ++ F N++V+N S +E LK+ +YG ITS ++ DG G+ F FVNF
Sbjct: 200 RDPASVDV-FTNLYVRNFPVSWDEEALKQFLDKYGEITSMMIKEDGKGRK--FAFVNFAE 256
Query: 259 ADDAAKAVEALNGKKFDD--REWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYI 316
+ A +AVEALNG K ++ V Q K++R+ LK Q+ + ++ NLYI
Sbjct: 257 PEMAKEAVEALNGTKLEEGSEPLLVCPHQDKAKRQAFLKSQYISGLDGSIASKASSNLYI 316
Query: 317 KNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKM 376
KNL DS DE L+ELF +FG+ITSCK+MRD SG+S+G GFV FS PEEA++A+A M+ K+
Sbjct: 317 KNLDDSFTDESLQELFGQFGSITSCKIMRDASGVSRGFGFVCFSRPEEATKAIAGMHLKI 376
Query: 377 IVSKPLYVAVAQRKEERRARLQ 398
+ KPLYV +A++KE+R +RLQ
Sbjct: 377 VKGKPLYVGLAEKKEQRLSRLQ 398
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 42/61 (68%)
Query: 511 QRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSV 570
Q+ ++GE L+P+V + D A K+TGM+LE+D E+L LLE LKAK+ EA+ VL+
Sbjct: 603 QKQMIGERLFPIVARDNPDLAGKITGMMLEIDNAELLALLEDDARLKAKIDEAIRVLKQA 662
Query: 571 A 571
+
Sbjct: 663 S 663
>gi|344277245|ref|XP_003410413.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Loxodonta africana]
Length = 602
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/378 (50%), Positives = 266/378 (70%), Gaps = 6/378 (1%)
Query: 26 QFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAA 85
++ SLYVGDL +VT+ L+ FS VG VLS+R+CRDL TRRSLGY YVN+ + ADA
Sbjct: 199 KYRMASLYVGDLHADVTEDLLFKKFSTVGPVLSIRICRDLVTRRSLGYAYVNFLHVADAQ 258
Query: 86 RALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNIL 145
+ALD +NF + KSIR+M+S RD +RKSG GN+FIKNLDKSID+K L++ FS+FG IL
Sbjct: 259 KALDTMNFDVIKGKSIRLMWSQRDAYLRKSGIGNVFIKNLDKSIDNKTLYEHFSTFGKIL 318
Query: 146 SCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIK 205
S K+ +D G SKG+ FV F+N+ +A AI+++NG L+ + +VFV F +++RE+ +K
Sbjct: 319 SSKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGTLLKNCRVFVSRFKSRKDRES-ELK 376
Query: 206 TK---FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDA 262
K F NV++KN + D LK++F +YGT S VM D GKSK FGFV+F + + A
Sbjct: 377 NKASEFTNVYIKNFGDDMDDMRLKEVFSKYGTTLSVKVMTDSSGKSKGFGFVSFASHEAA 436
Query: 263 AKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDS 322
AVE +NGK + + +VG+AQKK ER+ ELK FEQ +E + +G+ LYIKNL D+
Sbjct: 437 KNAVEEMNGKDINGQLIFVGRAQKKIERQAELKQMFEQLRQERFRRCRGVKLYIKNLDDT 496
Query: 323 IDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPL 382
IDDEKL++ F+ FG+I+ KVM++ G SKG G + FS+ EEA +A+ EMNG+++ SKPL
Sbjct: 497 IDDEKLRKEFASFGSISRVKVMQE-EGRSKGFGLICFSSHEEAIKAMTEMNGRILGSKPL 555
Query: 383 YVAVAQRKEERRARLQAQ 400
+A+AQR EER+ Q
Sbjct: 556 NIALAQRNEERKTCFDNQ 573
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 107/288 (37%), Positives = 166/288 (57%), Gaps = 16/288 (5%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATD-GSGQSKGFGFVQFENKESAQNAIDK 177
++++ +L + L FS+ G +LS +I D + +S G+ +V F + AQ A+D
Sbjct: 204 SLYVGDLHADVTEDLLFKKFSTVGPVLSIRICRDLVTRRSLGYAYVNFLHVADAQKALDT 263
Query: 178 LNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITS 237
+N +I K + L +R+ K+ NVF+KNLD+S ++ L + F +G I S
Sbjct: 264 MNFDVIKGKSIR----LMWSQRDAYLRKSGIGNVFIKNLDKSIDNKTLYEHFSTFGKILS 319
Query: 238 AVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQ 297
+ VM D G SK + FV+F+N A +A+E +NG + +V + + + +RE ELK +
Sbjct: 320 SKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGTLLKNCRVFVSRFKSRKDRESELKNK 378
Query: 298 FEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFV 357
+ N+YIKN GD +DD +LKE+FS++GT S KVM D SG SKG GFV
Sbjct: 379 ASEFT----------NVYIKNFGDDMDDMRLKEVFSKYGTTLSVKVMTDSSGKSKGFGFV 428
Query: 358 AFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
+F++ E A A+ EMNGK I + ++V AQ+K ER+A L+ F Q+R
Sbjct: 429 SFASHEAAKNAVEEMNGKDINGQLIFVGRAQKKIERQAELKQMFEQLR 476
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 108/211 (51%), Gaps = 26/211 (12%)
Query: 202 VAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD-GDGKSKCFGFVNFENAD 260
VA K + +++V +L T++ L K F G + S + RD +S + +VNF +
Sbjct: 196 VAAKYRMASLYVGDLHADVTEDLLFKKFSTVGPVLSIRICRDLVTRRSLGYAYVNFLHVA 255
Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKF---QGL-NLYI 316
DA KA++ +N FD +KG+ + M D + G+ N++I
Sbjct: 256 DAQKALDTMN---FD-----------------VIKGKSIRLMWSQRDAYLRKSGIGNVFI 295
Query: 317 KNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKM 376
KNL SID++ L E FS FG I S KVM D G SKG FV F A RA+ EMNG +
Sbjct: 296 KNLDKSIDNKTLYEHFSTFGKILSSKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGTL 354
Query: 377 IVSKPLYVAVAQRKEERRARLQAQFSQMRPV 407
+ + ++V+ + +++R + L+ + S+ V
Sbjct: 355 LKNCRVFVSRFKSRKDRESELKNKASEFTNV 385
>gi|297274127|ref|XP_002800732.1| PREDICTED: polyadenylate-binding protein 1 [Macaca mulatta]
Length = 605
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/402 (48%), Positives = 263/402 (65%), Gaps = 36/402 (8%)
Query: 27 FLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAAR 86
+ T SLYVGDL +VT++ LY+ FS+ G +LS+RVCRD+ TRRS Y YVN+ +P DA R
Sbjct: 8 YPTASLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRSSSYAYVNFQHPKDAER 67
Query: 87 ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
ALD +NF + K +RIM+S RDPS+R+SG
Sbjct: 68 ALDTMNFDVIKGKPVRIMWSQRDPSLRRSG------------------------------ 97
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET-VAIK 205
+ D +G SKG+GFV FE E+A+ AI+K+NG L+ND++VFVG F ++ERE + K
Sbjct: 98 --VVCDENG-SKGYGFVHFETHEAAERAIEKMNGTLLNDRKVFVGRFKSRKEREAELGAK 154
Query: 206 TK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAK 264
K F NV++KN E DE LK +FG++G S VM D GKSK FGFV+FE +DA K
Sbjct: 155 AKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQK 214
Query: 265 AVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSID 324
AV+ +NGK+ + + YVG+AQKK ER+ ELK +FEQ ++ + ++Q +NLY+KNL D ID
Sbjct: 215 AVDEMNGKELNGKHIYVGRAQKKVERQTELKRKFEQMKQDRITRYQVVNLYVKNLDDDID 274
Query: 325 DEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYV 384
DE+L++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +KPLYV
Sbjct: 275 DERLRKAFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 333
Query: 385 AVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSG 426
A+AQRKEER+A L ++ Q P P P PSG
Sbjct: 334 ALAQRKEERQAHLTNEYMQRMASVRAVPNPVINPYQPAPPSG 375
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 104/196 (53%), Gaps = 20/196 (10%)
Query: 21 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYAN 80
GA +F ++Y+ + ++ D +L DLF + G LSV+V D S +S G+G+V++
Sbjct: 152 GAKAKEF--PNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESG-KSKGFGFVSFER 208
Query: 81 PADAARALDVLNFTPLNNKSI----------------RIMYSHRDPSIRKSGTGNIFIKN 124
DA +A+D +N LN K I R + I + N+++KN
Sbjct: 209 HEDAQKAVDEMNGKELNGKHIYVGRAQKKVERQTELKRKFEQMKQDRITRYQVVNLYVKN 268
Query: 125 LDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLIN 184
LD ID + L FS FG I S K+ +G G+SKGFGFV F + E A A+ ++NG ++
Sbjct: 269 LDDDIDDERLRKAFSPFGTITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTEMNGRIVA 327
Query: 185 DKQVFVGHFLRKQERE 200
K ++V RK+ER+
Sbjct: 328 TKPLYVALAQRKEERQ 343
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 61/83 (73%)
Query: 497 TALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEAL 556
T ++ LA+A P++Q+ +LGE L+P ++ + A K+TGMLLE+D +E+LH+LESP++L
Sbjct: 513 TLTASMLASAPPQEQKQMLGERLFPPIQAMHPTLAGKITGMLLEIDNSELLHMLESPQSL 572
Query: 557 KAKVAEAMEVLRSVAQQQANNPA 579
++KV EA+ VL++ ++A A
Sbjct: 573 RSKVDEAVAVLQAHQAKEATQKA 595
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Query: 302 MKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP-SGISKGSGFVAFS 360
M + + +LY+ +L + + L E FS G I S +V RD + S +V F
Sbjct: 1 MNPSTPSYPTASLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRSSSYAYVNFQ 60
Query: 361 TPEEASRALAEMNGKMIVSKPLYVAVAQR 389
P++A RAL MN +I KP+ + +QR
Sbjct: 61 HPKDAERALDTMNFDVIKGKPVRIMWSQR 89
>gi|297743165|emb|CBI36032.3| unnamed protein product [Vitis vinifera]
Length = 476
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 191/388 (49%), Positives = 277/388 (71%), Gaps = 2/388 (0%)
Query: 24 GNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPAD 83
G + +LYVGDLD V++ +L D+FS +G ++SVR+CRD + +SL Y YVN+ +P+D
Sbjct: 23 GFELHKAALYVGDLDPEVSEVELVDVFSGMGPLVSVRLCRDSLSGKSLCYAYVNFFHPSD 82
Query: 84 AARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGN 143
A++AL LN T L K +RIM+SHRDP RK+G N+F+KNLD SI+ +L D F FGN
Sbjct: 83 ASKALACLNHTKLMGKPMRIMWSHRDPLPRKTGLANLFVKNLDPSINSASLQDIFCKFGN 142
Query: 144 ILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVA 203
ILSCK+A + +G+SK FGFVQF++ +SA A++ LN +++ K++FV F++K ER+ +
Sbjct: 143 ILSCKVAEE-NGKSKCFGFVQFDSDDSATAALNALNDTMLDGKKLFVSKFVKKCERKEAS 201
Query: 204 IKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAA 263
+TKF NV+VKNL E T++ ++ F E+G + + V+M+DG+GKS+ FGFVNFE+ D+A
Sbjct: 202 EETKFTNVYVKNLGEDLTEDIIRDKFSEFGKVGTVVIMKDGNGKSRGFGFVNFESPDEAK 261
Query: 264 KAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSI 323
KAVEALNG ++ +VG+AQKK+ER++ LK + ++ + + K + NLY+KNL S+
Sbjct: 262 KAVEALNGAMLGSKKLFVGRAQKKAERQELLKHE-KEMVNCNIGKEKASNLYVKNLDASV 320
Query: 324 DDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLY 383
DD+KL+E FS G ITS KVMR SG+SKG GFV FST EEA +AL +NG ++ + LY
Sbjct: 321 DDDKLQEHFSSCGQITSAKVMRHDSGLSKGFGFVCFSTSEEAQKALTTLNGTLLHGRSLY 380
Query: 384 VAVAQRKEERRARLQAQFSQMRPVAMGP 411
+A+AQRKE+R+ L+ +SQ GP
Sbjct: 381 IAMAQRKEDRQRVLRDYYSQYLLQYYGP 408
>gi|332858528|ref|XP_003317002.1| PREDICTED: poly(A) binding protein, cytoplasmic 1-like isoform 1
[Pan troglodytes]
Length = 330
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/326 (55%), Positives = 243/326 (74%), Gaps = 3/326 (0%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
ASG+ + SLYVGDL +VT++ LY+ FS G +LS+RVCRD++TRRSLGY Y+N+ P
Sbjct: 3 ASGSGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF L + IRIM+S RDP +RKSG GNIFIKNL+ SID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+A D G S+GFGFV FE E+AQ AI+ +NGML+ND++VFVGHF ++ERE
Sbjct: 123 GNILSCKVACDEHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRREREA 181
Query: 202 V--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
A +F N++VKNL ++ L+++F ++G + S VMRD G S+CFGFVNFE
Sbjct: 182 ELGARALEFTNIYVKNLPVDVDEQGLQELFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
++A KAV +NGK+ R Y G+AQK+ ER+ ELK +FEQ ++ + ++QG+NLY+KNL
Sbjct: 242 EEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMR 345
DSIDD+KL++ FS +G ITS K R
Sbjct: 302 DDSIDDDKLRKEFSPYGVITSAKKRR 327
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 101/296 (34%), Positives = 169/296 (57%), Gaps = 20/296 (6%)
Query: 115 SGTG----NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATD-GSGQSKGFGFVQFENKE 169
SG+G ++++ +L + L++ FS G ILS ++ D + +S G+ ++ F+
Sbjct: 4 SGSGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPA 63
Query: 170 SAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIF 229
A+ A+D +N ++ + + + +R+ K+ N+F+KNL++S ++ L F
Sbjct: 64 DAERALDTMNFEMLKGQPIRIMW----SQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTF 119
Query: 230 GEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSE 289
+G I S V D G S+ FGFV+FE + A +A+ +NG +DR+ +VG + + E
Sbjct: 120 STFGNILSCKVACDEHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRRE 178
Query: 290 REQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSG 349
RE EL + A++ T N+Y+KNL +D++ L+ELFS+FG + S KVMRD SG
Sbjct: 179 REAELGAR---ALEFT-------NIYVKNLPVDVDEQGLQELFSQFGKMLSVKVMRDNSG 228
Query: 350 ISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
S+ GFV F EEA +A+ MNGK + + LY AQ++ ER+ L+ +F QM+
Sbjct: 229 HSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMK 284
>gi|426391822|ref|XP_004062265.1| PREDICTED: polyadenylate-binding protein 1-like isoform 2 [Gorilla
gorilla gorilla]
gi|164651982|gb|ABY64766.1| ePAB [Homo sapiens]
Length = 330
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/326 (55%), Positives = 242/326 (74%), Gaps = 3/326 (0%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
ASG+ + SLYVGDL +VT++ LY+ FS G +LS+RVCRD++TRRSLGY Y+N+ P
Sbjct: 3 ASGSGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF L + IRIM+S RDP +RKSG GNIFIKNL+ SID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
GNILSCK+A D G S+GFGFV FE E+AQ AI+ +NGML+ND++VFVGHF ++ERE
Sbjct: 123 GNILSCKVACDEHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRREREA 181
Query: 202 V--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
A +F N++VKNL ++ L+ +F ++G + S VMRD G S+CFGFVNFE
Sbjct: 182 ELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
++A KAV +NGK+ R Y G+AQK+ ER+ ELK +FEQ ++ + ++QG+NLY+KNL
Sbjct: 242 EEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNL 301
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMR 345
DSIDD+KL++ FS +G ITS K R
Sbjct: 302 DDSIDDDKLRKEFSPYGVITSAKKRR 327
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/296 (33%), Positives = 169/296 (57%), Gaps = 20/296 (6%)
Query: 115 SGTG----NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATD-GSGQSKGFGFVQFENKE 169
SG+G ++++ +L + L++ FS G ILS ++ D + +S G+ ++ F+
Sbjct: 4 SGSGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPA 63
Query: 170 SAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIF 229
A+ A+D +N ++ + + + +R+ K+ N+F+KNL++S ++ L F
Sbjct: 64 DAERALDTMNFEMLKGQPIRIMW----SQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTF 119
Query: 230 GEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSE 289
+G I S V D G S+ FGFV+FE + A +A+ +NG +DR+ +VG + + E
Sbjct: 120 STFGNILSCKVACDEHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRRE 178
Query: 290 REQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSG 349
RE EL + A++ T N+Y+KNL +D++ L++LFS+FG + S KVMRD SG
Sbjct: 179 REAELGAR---ALEFT-------NIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSG 228
Query: 350 ISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
S+ GFV F EEA +A+ MNGK + + LY AQ++ ER+ L+ +F QM+
Sbjct: 229 HSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMK 284
>gi|296815242|ref|XP_002847958.1| polyadenylate-binding protein [Arthroderma otae CBS 113480]
gi|238840983|gb|EEQ30645.1| polyadenylate-binding protein [Arthroderma otae CBS 113480]
Length = 708
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 175/306 (57%), Positives = 233/306 (76%), Gaps = 3/306 (0%)
Query: 46 LYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMY 105
LY+LFS +GQV S+RVCRD TRRSLGY YVNY N AD RAL+ LN+T + + RIM+
Sbjct: 2 LYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGRPCRIMW 61
Query: 106 SHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQF 165
S RDP++RK+G GN+FIKNLD +ID+KALHDTF++FGNILSCK+A D G SKG+GFV +
Sbjct: 62 SQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILSCKVAQDEYGNSKGYGFVHY 121
Query: 166 ENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTKFNNVFVKNLDESTTDE 223
E E+A NAI +NGML+N+K+VFVGH + K++R++ +K F N++VKN+++ TDE
Sbjct: 122 ETAEAATNAIKHVNGMLLNEKKVFVGHHIAKKDRQSKFEEMKANFTNIYVKNVEQDVTDE 181
Query: 224 DLKKIFGEYGTITSAVVMRDGD-GKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVG 282
+ + +F +YG ITSA + RD + GKS+ FGFVNF + + A+ AVE LN + ++ YVG
Sbjct: 182 EFRALFEKYGDITSATLSRDNETGKSRGFGFVNFSDHEAASAAVEGLNEYELKGQKLYVG 241
Query: 283 KAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCK 342
+AQKK ERE+EL+ Q+E A E K+QG+NLYIKNL D IDDEKL+ELFS +G ITS K
Sbjct: 242 RAQKKHEREEELRKQYEAARIEKASKYQGVNLYIKNLSDDIDDEKLRELFSSYGNITSAK 301
Query: 343 VMRDPS 348
VMR+ +
Sbjct: 302 VMREAT 307
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 156/525 (29%), Positives = 242/525 (46%), Gaps = 110/525 (20%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ +LD + + L+D F+ G +LS +V +D S GYG+V+Y A A+
Sbjct: 75 NVFIKNLDTAIDNKALHDTFAAFGNILSCKVAQD-EYGNSKGYGFVHYETAEAATNAIKH 133
Query: 91 LNFTPLNNKSIRIMY--SHRDPSIR----KSGTGNIFIKNLDKSIDHKALHDTFSSFGNI 144
+N LN K + + + + +D + K+ NI++KN+++ + + F +G+I
Sbjct: 134 VNGMLLNEKKVFVGHHIAKKDRQSKFEEMKANFTNIYVKNVEQDVTDEEFRALFEKYGDI 193
Query: 145 LSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET-- 201
S ++ D +G+S+GFGFV F + E+A A++ LN + ++++VG +K ERE
Sbjct: 194 TSATLSRDNETGKSRGFGFVNFSDHEAASAAVEGLNEYELKGQKLYVGRAQKKHEREEEL 253
Query: 202 ----------VAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCF 251
A K + N+++KNL + DE L+++F YG ITSA VMR+ +
Sbjct: 254 RKQYEAARIEKASKYQGVNLYIKNLSDDIDDEKLRELFSSYGNITSAKVMREATAE---- 309
Query: 252 GFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQG 311
V E+ D K D+E G+A +K+E E
Sbjct: 310 --VPTESDKD-----------KEADKEKAKGEAGEKTEEGPE------------------ 338
Query: 312 LNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAE 371
G + D + K G K + G SKG GFV FS P+EAS+A+ E
Sbjct: 339 --------GKTDDKSEEKTEEKTEGKTEGAKPEKKHLGKSKGFGFVCFSNPDEASKAVTE 390
Query: 372 MNGKMIVSKPLYVAVAQRKEERRARLQAQFS-----QMRPVAMGPSVP------------ 414
MN +M+ KPLYVA+AQRK+ R+++L+A + + VA +P
Sbjct: 391 MNQRMVHGKPLYVALAQRKDVRKSQLEASIQARNTIRQQQVAAAAGMPQPFMQPAVFYGT 450
Query: 415 PRMPMYPPGPSGLGQQFLYGQAPPAIIPPQMP---PRGHAYRYP---LGRNM---QDFP- 464
P + PG G QF GQA ++ P MP P A ++P GR M Q P
Sbjct: 451 PGQQGFLPGAQRGGMQFA-GQA--GMVMPGMPGGRPAQFA-QFPGQQGGRGMNPNQPLPP 506
Query: 465 -FDMGAGSMLPVPVDMGAGIPR--------------RDASVGQPM 494
F MG G LP+ GAG+P R GQPM
Sbjct: 507 NFAMG-GQSLPMGAMQGAGMPNGLNYPQMAQVQSFGRGGGRGQPM 550
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 96/182 (52%), Gaps = 21/182 (11%)
Query: 225 LKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGK 283
L ++F G + S V RD +S + +VN+ N D +A+E LN R +
Sbjct: 2 LYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGRPCRI-- 59
Query: 284 AQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKV 343
+ Q + A+++T QG N++IKNL +ID++ L + F+ FG I SCKV
Sbjct: 60 ----------MWSQRDPALRKTG---QG-NVFIKNLDTAIDNKALHDTFAAFGNILSCKV 105
Query: 344 MRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQ 403
+D G SKG GFV + T E A+ A+ +NG ++ K ++V K++R Q++F +
Sbjct: 106 AQDEYGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIAKKDR----QSKFEE 161
Query: 404 MR 405
M+
Sbjct: 162 MK 163
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 76/143 (53%), Gaps = 16/143 (11%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
T++YV +++ +VTD + LF + G + S + RD T +S G+G+VN+++ A+ A++
Sbjct: 167 TNIYVKNVEQDVTDEEFRALFEKYGDITSATLSRDNETGKSRGFGFVNFSDHEAASAAVE 226
Query: 90 VLNFTPLNNKSI---RIMYSH-RDPSIRKSGTG------------NIFIKNLDKSIDHKA 133
LN L + + R H R+ +RK N++IKNL ID +
Sbjct: 227 GLNEYELKGQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQGVNLYIKNLSDDIDDEK 286
Query: 134 LHDTFSSFGNILSCKIATDGSGQ 156
L + FSS+GNI S K+ + + +
Sbjct: 287 LRELFSSYGNITSAKVMREATAE 309
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 505 NASPE-QQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEA 563
NA+PE QQ+ +LGE++YP V + + A K+TGMLLEMD +E++ L++ AL+AKV EA
Sbjct: 616 NAAPEPQQKQMLGEAIYPKVLAQQPELAGKITGMLLEMDNSELIGLVDDDAALRAKVDEA 675
Query: 564 MEVLRSVAQQQANNPADQLA 583
+ V + + P+ + A
Sbjct: 676 LTVYDEYVKNKTEAPSGEAA 695
>gi|395818359|ref|XP_003782600.1| PREDICTED: polyadenylate-binding protein 1, partial [Otolemur
garnettii]
Length = 539
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/406 (47%), Positives = 257/406 (63%), Gaps = 36/406 (8%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
S + SLYVGDL +VT++ LY+ FS G +LS+RVCRD+ TRRSLGY YVN+ PA
Sbjct: 4 SAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPA 63
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
DA RALD +NF + K +RIM+S RDPS+RK
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWSQRDPSLRKX--------------------------- 96
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 202
SKG+GFV FE +E+A+ AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 97 ------XXXXXXXXSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 150
Query: 203 --AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
A +F NV++KN E DE LK +FG++G S VM D GKSK FGFV+FE +
Sbjct: 151 LGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHE 210
Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
DA +NGK+ + ++ YVG+AQKK ER+ ELK +FEQ ++ + ++QG+NLY+KNL
Sbjct: 211 DAQXXXXXMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLD 270
Query: 321 DSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSK 380
D IDDE+L++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +K
Sbjct: 271 DGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATK 329
Query: 381 PLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSG 426
PLYVA+AQRKEER+A L Q+ Q P P P PSG
Sbjct: 330 PLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSG 375
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 103/197 (52%), Gaps = 22/197 (11%)
Query: 21 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYAN 80
GA +F T++Y+ + ++ D +L DLF + G LSV+V D S +S G+G+V++
Sbjct: 152 GARAKEF--TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESG-KSKGFGFVSFER 208
Query: 81 PADAARALDVLNFTPLNNKSIRIMYSHR-----------------DPSIRKSGTGNIFIK 123
DA +N LN K I + + + D R G N+++K
Sbjct: 209 HEDAQXXXXXMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGV-NLYVK 267
Query: 124 NLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLI 183
NLD ID + L FS FG I S K+ +G G+SKGFGFV F + E A A+ ++NG ++
Sbjct: 268 NLDDGIDDERLRKEFSPFGTITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTEMNGRIV 326
Query: 184 NDKQVFVGHFLRKQERE 200
K ++V RK+ER+
Sbjct: 327 ATKPLYVALAQRKEERQ 343
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 40/53 (75%), Gaps = 2/53 (3%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVL 547
P+TA + LA+A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+L
Sbjct: 489 PLTA--SMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELL 539
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Query: 302 MKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRD-PSGISKGSGFVAFS 360
M + + +LY+ +L + + L E FS G I S +V RD + S G +V F
Sbjct: 1 MNPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQ 60
Query: 361 TPEEASRALAEMNGKMIVSKPLYVAVAQR 389
P +A RAL MN +I KP+ + +QR
Sbjct: 61 QPADAERALDTMNFDVIKGKPVRIMWSQR 89
>gi|74189486|dbj|BAE22747.1| unnamed protein product [Mus musculus]
Length = 590
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 193/356 (54%), Positives = 254/356 (71%), Gaps = 26/356 (7%)
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF + K IRIM+S RDPS+RKSG GN+FIKNLD+SID+KAL+DTFS+FGNILSCK+
Sbjct: 1 MNFDVMKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDESIDNKALYDTFSAFGNILSCKVV 60
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET-VAIKTK-F 208
D +G SKG+ FV FE +E+A AI+K+NGML+ND++VFVG F ++ERE + K K F
Sbjct: 61 CDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEF 119
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NV++KN E D +LK++F ++G S VMRD GKSK FGFV++E +DA KAVE
Sbjct: 120 TNVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDSSGKSKGFGFVSYEKHEDANKAVEE 179
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
+NGK+ + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL D+IDDEKL
Sbjct: 180 MNGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKL 239
Query: 329 KELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
+ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ SKPLYVA+AQ
Sbjct: 240 RREFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 298
Query: 389 RKEERRARLQAQF----------------SQMRPVAMG---PSVPP---RMPMYPP 422
RKEER+A L Q+ +Q +P A G P+VP R P Y P
Sbjct: 299 RKEERKAHLTNQYMQRVAGMRALPASAILNQFQPAAGGYFVPAVPQAQGRPPYYTP 354
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/289 (35%), Positives = 165/289 (57%), Gaps = 23/289 (7%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ +LD ++ + LYD FS G +LS +V D + S GY +V++ A +A++
Sbjct: 29 NVFIKNLDESIDNKALYDTFSAFGNILSCKVVCDENG--SKGYAFVHFETQEAADKAIEK 86
Query: 91 LNFTPLNNKSIRI-MYSHRDPSIRKSGT-----GNIFIKNLDKSIDHKALHDTFSSFGNI 144
+N LN++ + + + R + G N++IKN + +D L + FS FG
Sbjct: 87 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDGNLKELFSQFGKT 146
Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAI 204
LS K+ D SG+SKGFGFV +E E A A++++NG ++ K +FVG +K ER+ +
Sbjct: 147 LSVKVMRDSSGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKAIFVGRAQKKVERQ-AEL 205
Query: 205 KTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCF 251
K KF N+++KNLD++ DE L++ F +G+ITSA VM + DG+SK F
Sbjct: 206 KRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRREFSPFGSITSAKVMLE-DGRSKGF 264
Query: 252 GFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQ 300
GFV F + ++A KAV +NG+ + YV AQ+K ER+ L Q+ Q
Sbjct: 265 GFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAHLTNQYMQ 313
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 109/197 (55%), Gaps = 20/197 (10%)
Query: 21 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYAN 80
GA +F T++Y+ + V D L +LFSQ G+ LSV+V RD S+ +S G+G+V+Y
Sbjct: 113 GAKAKEF--TNVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRD-SSGKSKGFGFVSYEK 169
Query: 81 PADAARALDVLNFTPLNNKSI----------------RIMYSHRDPSIRKSGTGNIFIKN 124
DA +A++ +N ++ K+I R + I + N++IKN
Sbjct: 170 HEDANKAVEEMNGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN 229
Query: 125 LDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLIN 184
LD +ID + L FS FG+I S K+ + G+SKGFGFV F + E A A+ ++NG ++
Sbjct: 230 LDDTIDDEKLRREFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVG 288
Query: 185 DKQVFVGHFLRKQERET 201
K ++V RK+ER+
Sbjct: 289 SKPLYVALAQRKEERKA 305
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 60/75 (80%), Gaps = 2/75 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A P++Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 499 PLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPE 556
Query: 555 ALKAKVAEAMEVLRS 569
+L++KV EA+ VL++
Sbjct: 557 SLRSKVDEAVAVLQA 571
>gi|324511850|gb|ADY44928.1| Polyadenylate-binding protein 1, partial [Ascaris suum]
Length = 544
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 197/448 (43%), Positives = 277/448 (61%), Gaps = 23/448 (5%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL +V ++ L + FS +G+VLS+RVCRD TRRSLGY YVN+ P DA +AL+
Sbjct: 17 SLYVGDLHPDVNETVLLEKFSNIGRVLSIRVCRDALTRRSLGYAYVNFERPEDAKQALET 76
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF ++ + IRIM+S R PS + GN+F+KNL+ S++ KAL++ FS FGNI+SCK+A
Sbjct: 77 MNFDIVHGRPIRIMWSQRRPSTSRVAAGNVFVKNLNGSVNSKALYNKFSVFGNIVSCKLA 136
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK--F 208
D +SKG+GFVQFE +E+A+ AID NG++ K+++VG F + ER A +T F
Sbjct: 137 VDEQSKSKGYGFVQFETEEAARKAIDGTNGVIFEGKRIYVGRFQSRSERSEQAKRTTNCF 196
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NVFVKN + E L+++F ++G I S V DGDGK FGFV FEN DDA KAV+
Sbjct: 197 TNVFVKNFADILDKEKLQQLFAKFGKIVSCAVSVDGDGKPNGFGFVAFENPDDAEKAVKD 256
Query: 269 LNGKKF--DDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
+ DR+ YV + QKK ER EL +++ E +++G NLY+KNL D+IDD+
Sbjct: 257 MQDYHLPGSDRKLYVSRFQKKCERLAELDRKYQLEKNERAKRYEGANLYLKNLDDAIDDD 316
Query: 327 KLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 386
L+ F E+G + S KVMR G SKG GFV F P+EA +A+ M GKM+ +KPLYV++
Sbjct: 317 MLRRSFGEYGNVISAKVMRSDDGRSKGFGFVCFDKPDEAVKAMTAMKGKMVCTKPLYVSM 376
Query: 387 AQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPPQMP 446
AQRKE+R+A + +Q+ Q R+ + G Y + ++ P
Sbjct: 377 AQRKEDRKAFIASQYMQ------------RIASIRMQATSFGSGMTY-MSDSTVVQPLFA 423
Query: 447 PRGHAYRYPLGRNMQDFPFDMGAGSMLP 474
G R L RNM + D+ +M+P
Sbjct: 424 CYG---RGTLQRNMSN---DVAVATMVP 445
>gi|399217460|emb|CCF74347.1| unnamed protein product [Babesia microti strain RI]
Length = 679
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 214/521 (41%), Positives = 308/521 (59%), Gaps = 54/521 (10%)
Query: 21 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYAN 80
G G F + SLYVGDL VT++ LY++F+ +G V S+RVCRD TR+SLGY YVNY N
Sbjct: 32 GNEGQLFPSASLYVGDLSPEVTEAILYEIFNTIGPVASIRVCRDSITRKSLGYAYVNYHN 91
Query: 81 PADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSS 140
DA RAL+ L + + K +RIM+SHRDPS+RKSG GN+FIKN+D+SID KAL+D FS
Sbjct: 92 VNDARRALEALKYNEICGKQVRIMWSHRDPSLRKSGAGNVFIKNIDESIDTKALYDAFSP 151
Query: 141 FGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERE 200
+G ILSCK+ATD +G+S+G+GFV F+ + +A AI NGM + +K++FV F+R+ ER
Sbjct: 152 YGQILSCKVATDETGRSRGYGFVHFDTEANATRAISDANGMQLGNKKIFVAPFVRRSERV 211
Query: 201 TV-----AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVN 255
+ + KF N++V+N E+ +E LK+ F +G ITS ++ D G+ F F+N
Sbjct: 212 SSTKLEDGVDEKFTNLYVRNFPENWNEEILKENFSPFGEITSMMMKSDPLGRK--FAFIN 269
Query: 256 FENADDAAKAVEALNGKKFD----DREWYVGKAQKKSE-------------REQELKGQF 298
+ A A+E +NGK F D+ G+ KSE R LK ++
Sbjct: 270 YAENSMAKAAIETMNGKDFSIKSGDKSTIEGEDTDKSETKLLVCAHQDRARRHAMLKAKY 329
Query: 299 EQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVA 358
+ E K+QG+NLYIKNL DSI+D +L+ELF FG ITSCKVM D G S G GFV
Sbjct: 330 DSMHAENKSKYQGVNLYIKNLDDSINDAELRELFEGFGLITSCKVMVDEHGASLGFGFVC 389
Query: 359 FSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQF-----------SQMRPV 407
F +PE+A+ A++EM+ K++ +KPLYV +A+++E+R RLQ ++ + P
Sbjct: 390 FVSPEDATHAVSEMHLKLVHNKPLYVGLAEKREQRLNRLQMRYKVGHNRDGMPMGMLPPH 449
Query: 408 AMGPSVPPRMPMYPPGPSGLGQQFLY---------GQAPPAIIPPQMPPRGHAYRYPLGR 458
M P + +PM P + Q++Y A++P Q + H P+G
Sbjct: 450 GMMPPMHMGVPMMP-----VNGQYMYPNPNIHGPNSSQQNAMMPYQWRHQYHPGIPPVG- 503
Query: 459 NMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITAL 499
MQ PF+ G+ +PVP+ + + R GQ +P+ L
Sbjct: 504 -MQ-VPFN-ARGANMPVPMRVYNPMGNRGVR-GQNVPVQKL 540
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 57/88 (64%), Gaps = 4/88 (4%)
Query: 483 IPRRDA--SVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLE 540
+P RD+ + Q ITA + LA A P Q+ +LGE L+P++ + + A KVTGM+LE
Sbjct: 591 VPGRDSNDTTFQEAHITAAT--LAAAHPNMQKQMLGEKLFPIIARHNPELAGKVTGMMLE 648
Query: 541 MDQTEVLHLLESPEALKAKVAEAMEVLR 568
MD +E+L LLES + L AK EA+ VL+
Sbjct: 649 MDNSELLILLESEKQLIAKADEAIRVLQ 676
>gi|119625554|gb|EAX05149.1| hCG1647909 [Homo sapiens]
Length = 369
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/367 (51%), Positives = 260/367 (70%), Gaps = 6/367 (1%)
Query: 26 QFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAA 85
++ SLYVGDL +VT+ L+ FS VG VLS+R+CRD TRRSLGY YVN+ ADA
Sbjct: 6 KYRMASLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQ 65
Query: 86 RALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNIL 145
+ALD +NF + KSIR+M+S RD +R+SG GN+FIKNLDKSID+K L++ FS+FG IL
Sbjct: 66 KALDTMNFDIIKGKSIRLMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSAFGKIL 125
Query: 146 SCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIK 205
S K+ +D G SKG+ FV F+N+ +A AI+++NG L+ +VFVG F +++RE ++
Sbjct: 126 SSKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKDREA-ELR 183
Query: 206 TK---FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDA 262
+K F NV++KN DE LK +F +YG S VM D GKSK FGFV+F++ + A
Sbjct: 184 SKASEFTNVYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDSHEAA 243
Query: 263 AKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDS 322
KAVE +NG+ + + +VG+AQKK ER+ ELK FEQ +E + QG+ LYIKNL D+
Sbjct: 244 KKAVEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLKRERIRGCQGVKLYIKNLDDT 303
Query: 323 IDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPL 382
IDDEKL+ FS FG+I+ KVM++ G SKG G + FS+PE+A++A+ EMNG+++ SKPL
Sbjct: 304 IDDEKLRNEFSSFGSISRVKVMQEE-GQSKGFGLICFSSPEDATKAMTEMNGRILGSKPL 362
Query: 383 YVAVAQR 389
+A+AQR
Sbjct: 363 SIALAQR 369
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 166/288 (57%), Gaps = 16/288 (5%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDK 177
++++ +L + L FS+ G +LS +I D + +S G+ +V F AQ A+D
Sbjct: 11 SLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALDT 70
Query: 178 LNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITS 237
+N +I K + L +R+ ++ NVF+KNLD+S ++ L + F +G I S
Sbjct: 71 MNFDIIKGKSIR----LMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSAFGKILS 126
Query: 238 AVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQ 297
+ VM D G SK + FV+F+N A +A+E +NGK + +VG+ + + +RE EL+ +
Sbjct: 127 SKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKDREAELRSK 185
Query: 298 FEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFV 357
+ N+YIKN G +DDE+LK++FS++G S KVM D SG SKG GFV
Sbjct: 186 ASEFT----------NVYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFV 235
Query: 358 AFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
+F + E A +A+ EMNG+ I + ++V AQ+K ER+A L+ F Q++
Sbjct: 236 SFDSHEAAKKAVEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLK 283
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 107/211 (50%), Gaps = 26/211 (12%)
Query: 202 VAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENAD 260
VA K + +++V +L T++ L + F G + S + RD +S + +VNF
Sbjct: 3 VAAKYRMASLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLA 62
Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKF---QGL-NLYI 316
DA KA++ +N FD +KG+ + M D + G+ N++I
Sbjct: 63 DAQKALDTMN---FD-----------------IIKGKSIRLMWSQRDAYLRRSGIGNVFI 102
Query: 317 KNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKM 376
KNL SID++ L E FS FG I S KVM D G SKG FV F A RA+ EMNGK+
Sbjct: 103 KNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGKL 161
Query: 377 IVSKPLYVAVAQRKEERRARLQAQFSQMRPV 407
+ ++V + +++R A L+++ S+ V
Sbjct: 162 LKGCKVFVGRFKNRKDREAELRSKASEFTNV 192
>gi|259515737|sp|P0CB38.1|PAB4L_HUMAN RecName: Full=Polyadenylate-binding protein 4-like;
Short=PABP-4-like; Short=Poly(A)-binding protein 4-like
Length = 370
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/367 (51%), Positives = 260/367 (70%), Gaps = 6/367 (1%)
Query: 26 QFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAA 85
++ SLYVGDL +VT+ L+ FS VG VLS+R+CRD TRRSLGY YVN+ ADA
Sbjct: 6 KYRMASLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQ 65
Query: 86 RALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNIL 145
+ALD +NF + KSIR+M+S RD +R+SG GN+FIKNLDKSID+K L++ FS+FG IL
Sbjct: 66 KALDTMNFDIIKGKSIRLMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSAFGKIL 125
Query: 146 SCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIK 205
S K+ +D G SKG+ FV F+N+ +A AI+++NG L+ +VFVG F +++RE ++
Sbjct: 126 SSKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKDREA-ELR 183
Query: 206 TK---FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDA 262
+K F NV++KN DE LK +F +YG S VM D GKSK FGFV+F++ + A
Sbjct: 184 SKASEFTNVYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDSHEAA 243
Query: 263 AKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDS 322
KAVE +NG+ + + +VG+AQKK ER+ ELK FEQ +E + QG+ LYIKNL D+
Sbjct: 244 KKAVEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLKRERIRGCQGVKLYIKNLDDT 303
Query: 323 IDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPL 382
IDDEKL+ FS FG+I+ KVM++ G SKG G + FS+PE+A++A+ EMNG+++ SKPL
Sbjct: 304 IDDEKLRNEFSSFGSISRVKVMQEE-GQSKGFGLICFSSPEDATKAMTEMNGRILGSKPL 362
Query: 383 YVAVAQR 389
+A+AQR
Sbjct: 363 SIALAQR 369
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 166/288 (57%), Gaps = 16/288 (5%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDK 177
++++ +L + L FS+ G +LS +I D + +S G+ +V F AQ A+D
Sbjct: 11 SLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALDT 70
Query: 178 LNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITS 237
+N +I K + L +R+ ++ NVF+KNLD+S ++ L + F +G I S
Sbjct: 71 MNFDIIKGKSIR----LMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSAFGKILS 126
Query: 238 AVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQ 297
+ VM D G SK + FV+F+N A +A+E +NGK + +VG+ + + +RE EL+ +
Sbjct: 127 SKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKDREAELRSK 185
Query: 298 FEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFV 357
+ N+YIKN G +DDE+LK++FS++G S KVM D SG SKG GFV
Sbjct: 186 ASEFT----------NVYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFV 235
Query: 358 AFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
+F + E A +A+ EMNG+ I + ++V AQ+K ER+A L+ F Q++
Sbjct: 236 SFDSHEAAKKAVEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLK 283
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 107/211 (50%), Gaps = 26/211 (12%)
Query: 202 VAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENAD 260
VA K + +++V +L T++ L + F G + S + RD +S + +VNF
Sbjct: 3 VAAKYRMASLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLA 62
Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKF---QGL-NLYI 316
DA KA++ +N FD +KG+ + M D + G+ N++I
Sbjct: 63 DAQKALDTMN---FD-----------------IIKGKSIRLMWSQRDAYLRRSGIGNVFI 102
Query: 317 KNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKM 376
KNL SID++ L E FS FG I S KVM D G SKG FV F A RA+ EMNGK+
Sbjct: 103 KNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGKL 161
Query: 377 IVSKPLYVAVAQRKEERRARLQAQFSQMRPV 407
+ ++V + +++R A L+++ S+ V
Sbjct: 162 LKGCKVFVGRFKNRKDREAELRSKASEFTNV 192
>gi|426345476|ref|XP_004040437.1| PREDICTED: polyadenylate-binding protein 4-like [Gorilla gorilla
gorilla]
Length = 428
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/366 (50%), Positives = 259/366 (70%), Gaps = 4/366 (1%)
Query: 26 QFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAA 85
++ SLYVGDL +VT+ L+ FS VG VLS+R+CRD TRRSLGY YVN+ ADA
Sbjct: 64 KYRMASLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQ 123
Query: 86 RALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNIL 145
+ALD +NF + KSIR+M+S RD +R+SG GN+FIKNLDKSID+K L++ FS+FG IL
Sbjct: 124 KALDTMNFDIIKGKSIRLMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSAFGKIL 183
Query: 146 SCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET--VA 203
S K+ +D G SKG+ FV F+N+ +A AI+++NG L+ +VFVG F +++RE +
Sbjct: 184 SSKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKDREAELRS 242
Query: 204 IKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAA 263
++F N+++KN DE LK +F +YG S VM D GKSK FGFV+F++ + A
Sbjct: 243 KASEFTNIYIKNFGGEMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDSHEAAK 302
Query: 264 KAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSI 323
KAVE +NG+ + + +VG+AQKK ER+ ELK FEQ +E + QG+ LYIKNL D+I
Sbjct: 303 KAVEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLKRERIRGCQGVKLYIKNLDDTI 362
Query: 324 DDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLY 383
DDEKL+ FS FG+I+ KVM++ G SKG G + FS+PE+A++A+ EMNG+++ SKPL
Sbjct: 363 DDEKLRNEFSSFGSISRVKVMQEE-GQSKGFGLICFSSPEDATKAMTEMNGRILGSKPLS 421
Query: 384 VAVAQR 389
+A+AQR
Sbjct: 422 IALAQR 427
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 166/288 (57%), Gaps = 16/288 (5%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDK 177
++++ +L + L FS+ G +LS +I D + +S G+ +V F AQ A+D
Sbjct: 69 SLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALDT 128
Query: 178 LNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITS 237
+N +I K + L +R+ ++ NVF+KNLD+S ++ L + F +G I S
Sbjct: 129 MNFDIIKGKSIR----LMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSAFGKILS 184
Query: 238 AVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQ 297
+ VM D G SK + FV+F+N A +A+E +NGK + +VG+ + + +RE EL+ +
Sbjct: 185 SKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKDREAELRSK 243
Query: 298 FEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFV 357
+ N+YIKN G +DDE+LK++FS++G S KVM D SG SKG GFV
Sbjct: 244 ASEFT----------NIYIKNFGGEMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFV 293
Query: 358 AFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
+F + E A +A+ EMNG+ I + ++V AQ+K ER+A L+ F Q++
Sbjct: 294 SFDSHEAAKKAVEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLK 341
>gi|291084655|ref|NP_001108206.2| polyadenylate-binding protein 4-like [Homo sapiens]
Length = 428
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/366 (51%), Positives = 259/366 (70%), Gaps = 4/366 (1%)
Query: 26 QFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAA 85
++ SLYVGDL +VT+ L+ FS VG VLS+R+CRD TRRSLGY YVN+ ADA
Sbjct: 64 KYRMASLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQ 123
Query: 86 RALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNIL 145
+ALD +NF + KSIR+M+S RD +R+SG GN+FIKNLDKSID+K L++ FS+FG IL
Sbjct: 124 KALDTMNFDIIKGKSIRLMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSAFGKIL 183
Query: 146 SCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET--VA 203
S K+ +D G SKG+ FV F+N+ +A AI+++NG L+ +VFVG F +++RE +
Sbjct: 184 SSKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKDREAELRS 242
Query: 204 IKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAA 263
++F NV++KN DE LK +F +YG S VM D GKSK FGFV+F++ + A
Sbjct: 243 KASEFTNVYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDSHEAAK 302
Query: 264 KAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSI 323
KAVE +NG+ + + +VG+AQKK ER+ ELK FEQ +E + QG+ LYIKNL D+I
Sbjct: 303 KAVEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLKRERIRGCQGVKLYIKNLDDTI 362
Query: 324 DDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLY 383
DDEKL+ FS FG+I+ KVM++ G SKG G + FS+PE+A++A+ EMNG+++ SKPL
Sbjct: 363 DDEKLRNEFSSFGSISRVKVMQEE-GQSKGFGLICFSSPEDATKAMTEMNGRILGSKPLS 421
Query: 384 VAVAQR 389
+A+AQR
Sbjct: 422 IALAQR 427
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 166/288 (57%), Gaps = 16/288 (5%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDK 177
++++ +L + L FS+ G +LS +I D + +S G+ +V F AQ A+D
Sbjct: 69 SLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALDT 128
Query: 178 LNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITS 237
+N +I K + L +R+ ++ NVF+KNLD+S ++ L + F +G I S
Sbjct: 129 MNFDIIKGKSIR----LMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSAFGKILS 184
Query: 238 AVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQ 297
+ VM D G SK + FV+F+N A +A+E +NGK + +VG+ + + +RE EL+ +
Sbjct: 185 SKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKDREAELRSK 243
Query: 298 FEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFV 357
+ N+YIKN G +DDE+LK++FS++G S KVM D SG SKG GFV
Sbjct: 244 ASEFT----------NVYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFV 293
Query: 358 AFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
+F + E A +A+ EMNG+ I + ++V AQ+K ER+A L+ F Q++
Sbjct: 294 SFDSHEAAKKAVEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLK 341
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 109/217 (50%), Gaps = 26/217 (11%)
Query: 196 KQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFV 254
K + VA K + +++V +L T++ L + F G + S + RD +S + +V
Sbjct: 55 KDKEMNVAAKYRMASLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYV 114
Query: 255 NFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKF---QG 311
NF DA KA++ +N FD +KG+ + M D + G
Sbjct: 115 NFLQLADAQKALDTMN---FD-----------------IIKGKSIRLMWSQRDAYLRRSG 154
Query: 312 L-NLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALA 370
+ N++IKNL SID++ L E FS FG I S KVM D G SKG FV F A RA+
Sbjct: 155 IGNVFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQG-SKGYAFVHFQNQSAADRAIE 213
Query: 371 EMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPV 407
EMNGK++ ++V + +++R A L+++ S+ V
Sbjct: 214 EMNGKLLKGCKVFVGRFKNRKDREAELRSKASEFTNV 250
>gi|332231054|ref|XP_003264711.1| PREDICTED: polyadenylate-binding protein 4-like [Nomascus
leucogenys]
Length = 428
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/366 (50%), Positives = 259/366 (70%), Gaps = 4/366 (1%)
Query: 26 QFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAA 85
++ SLYVGDL +VT+ L+ FS VG VLS+R+CRD TRRSLGY YVN+ ADA
Sbjct: 64 KYRMASLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQ 123
Query: 86 RALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNIL 145
+ALD +NF + KSIR+M+S RD +R+SG GN+FIKNLDKSID+K L++ FS+FG IL
Sbjct: 124 KALDTMNFDMIKGKSIRLMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSAFGKIL 183
Query: 146 SCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET--VA 203
S K+ +D G SKG+ FV F+N+ +A AI+++NG L+ +VFVG F +++RE +
Sbjct: 184 SSKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKDREAELRS 242
Query: 204 IKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAA 263
++F N+++KN DE LK +F +YG S VM D GKSK FGFV+F++ + A
Sbjct: 243 KASEFTNIYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDSHEAAK 302
Query: 264 KAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSI 323
KAVE +NG+ + + +VG+AQKK ER+ ELK FEQ +E + QG+ LYIKNL D+I
Sbjct: 303 KAVEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLKRERIRGCQGVKLYIKNLDDTI 362
Query: 324 DDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLY 383
DDEKL+ FS FG+I+ KVM++ G SKG G + FS+PE+A++A+ EMNG+++ SKPL
Sbjct: 363 DDEKLRNEFSSFGSISRVKVMQE-EGQSKGFGLICFSSPEDATKAMTEMNGRILGSKPLS 421
Query: 384 VAVAQR 389
+A+AQR
Sbjct: 422 IALAQR 427
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 176/325 (54%), Gaps = 33/325 (10%)
Query: 99 KSIRIMYSHRDPSIRKSG-----------------TGNIFIKNLDKSIDHKALHDTFSSF 141
+S +++ HRD S G ++++ +L + L FS+
Sbjct: 32 QSCGLVFPHRDCSKSSRGQTHSGKDKEMNVAAKYRMASLYVGDLHADVTEDLLFRKFSTV 91
Query: 142 GNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERE 200
G +LS +I D + +S G+ +V F AQ A+D +N +I K + L +R+
Sbjct: 92 GPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALDTMNFDMIKGKSIR----LMWSQRD 147
Query: 201 TVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
++ NVF+KNLD+S ++ L + F +G I S+ VM D G SK + FV+F+N
Sbjct: 148 AYLRRSGIGNVFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQG-SKGYAFVHFQNQS 206
Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
A +A+E +NGK + +VG+ + + +RE EL+ + + N+YIKN G
Sbjct: 207 AADRAIEEMNGKLLKGCKVFVGRFKNRKDREAELRSKASEFT----------NIYIKNFG 256
Query: 321 DSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSK 380
+DDE+LK++FS++G S KVM D SG SKG GFV+F + E A +A+ EMNG+ I +
Sbjct: 257 GDMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDSHEAAKKAVEEMNGRDINGQ 316
Query: 381 PLYVAVAQRKEERRARLQAQFSQMR 405
++V AQ+K ER+A L+ F Q++
Sbjct: 317 LIFVGRAQKKVERQAELKQMFEQLK 341
>gi|397485813|ref|XP_003814033.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Pan paniscus]
Length = 427
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/366 (50%), Positives = 259/366 (70%), Gaps = 4/366 (1%)
Query: 26 QFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAA 85
++ SLYVGDL +VT+ L+ FS VG VLS+R+CRD TRRSLGY YVN+ ADA
Sbjct: 63 KYRMASLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQ 122
Query: 86 RALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNIL 145
+ALD +NF + KSIR+M+S RD +R+SG GN+FIKNLDKSID+K L++ FS+FG IL
Sbjct: 123 KALDTMNFDIIKGKSIRLMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSAFGKIL 182
Query: 146 SCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET--VA 203
S K+ +D G SKG+ FV F+N+ +A AI+++NG L+ +VFVG F +++RE +
Sbjct: 183 SSKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKDREAELRS 241
Query: 204 IKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAA 263
++F N+++KN DE LK +F +YG S VM D GKSK FGFV+F++ + A
Sbjct: 242 KASEFTNIYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDSHEAAK 301
Query: 264 KAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSI 323
KAVE +NG+ + + +VG+AQKK ER+ ELK FEQ +E + QG+ LYIKNL D+I
Sbjct: 302 KAVEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLKRERIRGCQGVKLYIKNLDDTI 361
Query: 324 DDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLY 383
DDEKL+ FS FG+I+ KVM++ G SKG G + FS+PE+A++A+ EMNG+++ SKPL
Sbjct: 362 DDEKLRNEFSSFGSISRVKVMQEE-GQSKGFGLICFSSPEDATKAMTEMNGRILGSKPLS 420
Query: 384 VAVAQR 389
+A+AQR
Sbjct: 421 IALAQR 426
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 166/288 (57%), Gaps = 16/288 (5%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDK 177
++++ +L + L FS+ G +LS +I D + +S G+ +V F AQ A+D
Sbjct: 68 SLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALDT 127
Query: 178 LNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITS 237
+N +I K + L +R+ ++ NVF+KNLD+S ++ L + F +G I S
Sbjct: 128 MNFDIIKGKSIR----LMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSAFGKILS 183
Query: 238 AVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQ 297
+ VM D G SK + FV+F+N A +A+E +NGK + +VG+ + + +RE EL+ +
Sbjct: 184 SKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKDREAELRSK 242
Query: 298 FEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFV 357
+ N+YIKN G +DDE+LK++FS++G S KVM D SG SKG GFV
Sbjct: 243 ASEFT----------NIYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFV 292
Query: 358 AFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
+F + E A +A+ EMNG+ I + ++V AQ+K ER+A L+ F Q++
Sbjct: 293 SFDSHEAAKKAVEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLK 340
>gi|332820240|ref|XP_526690.3| PREDICTED: polyadenylate-binding protein 4-like [Pan troglodytes]
Length = 428
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/366 (50%), Positives = 259/366 (70%), Gaps = 4/366 (1%)
Query: 26 QFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAA 85
++ SLYVGDL +VT+ L+ FS VG VLS+R+CRD TRRSLGY YVN+ ADA
Sbjct: 64 KYRMASLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQ 123
Query: 86 RALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNIL 145
+ALD +NF + KSIR+M+S RD +R+SG GN+FIKNLDKSID+K L++ FS+FG IL
Sbjct: 124 KALDTMNFDIIKGKSIRLMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSAFGKIL 183
Query: 146 SCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET--VA 203
S K+ +D G SKG+ FV F+N+ +A AI+++NG L+ +VFVG F +++RE +
Sbjct: 184 SSKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKDREAELRS 242
Query: 204 IKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAA 263
++F N+++KN DE LK +F +YG S VM D GKSK FGFV+F++ + A
Sbjct: 243 KASEFTNIYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDSHEAAK 302
Query: 264 KAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSI 323
KAVE +NG+ + + +VG+AQKK ER+ ELK FEQ +E + QG+ LYIKNL D+I
Sbjct: 303 KAVEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLKRERIRGCQGVKLYIKNLDDTI 362
Query: 324 DDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLY 383
DDEKL+ FS FG+I+ KVM++ G SKG G + FS+PE+A++A+ EMNG+++ SKPL
Sbjct: 363 DDEKLRNEFSSFGSISRVKVMQEE-GQSKGFGLICFSSPEDATKAMTEMNGRILGSKPLS 421
Query: 384 VAVAQR 389
+A+AQR
Sbjct: 422 IALAQR 427
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 166/288 (57%), Gaps = 16/288 (5%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDK 177
++++ +L + L FS+ G +LS +I D + +S G+ +V F AQ A+D
Sbjct: 69 SLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALDT 128
Query: 178 LNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITS 237
+N +I K + L +R+ ++ NVF+KNLD+S ++ L + F +G I S
Sbjct: 129 MNFDIIKGKSIR----LMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSAFGKILS 184
Query: 238 AVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQ 297
+ VM D G SK + FV+F+N A +A+E +NGK + +VG+ + + +RE EL+ +
Sbjct: 185 SKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKDREAELRSK 243
Query: 298 FEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFV 357
+ N+YIKN G +DDE+LK++FS++G S KVM D SG SKG GFV
Sbjct: 244 ASEFT----------NIYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFV 293
Query: 358 AFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
+F + E A +A+ EMNG+ I + ++V AQ+K ER+A L+ F Q++
Sbjct: 294 SFDSHEAAKKAVEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLK 341
>gi|297674344|ref|XP_002815190.1| PREDICTED: polyadenylate-binding protein 4-like [Pongo abelii]
Length = 428
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/366 (50%), Positives = 259/366 (70%), Gaps = 4/366 (1%)
Query: 26 QFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAA 85
++ SLYVGDL +VT+ L+ FS VG VLS+R+CRD TRRSLGY YVN+ ADA
Sbjct: 64 KYRMASLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQ 123
Query: 86 RALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNIL 145
+ALD +NF + KSIR+M+S RD +R+SG GN+FIKNLDKSID+K L++ FS+FG IL
Sbjct: 124 KALDTMNFDIIKGKSIRLMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSAFGKIL 183
Query: 146 SCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET--VA 203
S K+ +D G SKG+ FV F+N+ +A AI+++NG L+ +VFVG F +++RE +
Sbjct: 184 SSKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKDREAELRS 242
Query: 204 IKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAA 263
++F N+++KN DE LK +F +YG S VM D GKSK FGFV+F++ + A
Sbjct: 243 KASEFTNIYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDSHEAAK 302
Query: 264 KAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSI 323
KAVE +NG+ + + +VG+AQKK ER+ ELK FEQ +E + QG+ LYIKNL D+I
Sbjct: 303 KAVEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLKRERICGCQGVKLYIKNLDDTI 362
Query: 324 DDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLY 383
DDEKL+ FS FG+I+ KVM++ G SKG G + FS+PE+A++A+ EMNG+++ SKPL
Sbjct: 363 DDEKLRNEFSSFGSISRVKVMQEE-GQSKGFGLICFSSPEDATKAMTEMNGRILGSKPLS 421
Query: 384 VAVAQR 389
+A+AQR
Sbjct: 422 IALAQR 427
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 166/288 (57%), Gaps = 16/288 (5%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDK 177
++++ +L + L FS+ G +LS +I D + +S G+ +V F AQ A+D
Sbjct: 69 SLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALDT 128
Query: 178 LNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITS 237
+N +I K + L +R+ ++ NVF+KNLD+S ++ L + F +G I S
Sbjct: 129 MNFDIIKGKSIR----LMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSAFGKILS 184
Query: 238 AVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQ 297
+ VM D G SK + FV+F+N A +A+E +NGK + +VG+ + + +RE EL+ +
Sbjct: 185 SKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKDREAELRSK 243
Query: 298 FEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFV 357
+ N+YIKN G +DDE+LK++FS++G S KVM D SG SKG GFV
Sbjct: 244 ASEFT----------NIYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFV 293
Query: 358 AFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
+F + E A +A+ EMNG+ I + ++V AQ+K ER+A L+ F Q++
Sbjct: 294 SFDSHEAAKKAVEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLK 341
>gi|400597582|gb|EJP65312.1| polyadenylate-binding protein [Beauveria bassiana ARSEF 2860]
Length = 736
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 176/319 (55%), Positives = 242/319 (75%), Gaps = 2/319 (0%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVG+LD +VT++ L++LFSQ+G V S+RVCRD TRRSLGY YVNY + D +AL
Sbjct: 54 SASLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNSTPDGEKAL 113
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LN+T + + RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++FGNILSCK
Sbjct: 114 EELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCK 173
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKT 206
+A D +G SKG+GFV +E E+AQ AI +NGML+N+K+V+VGH + K++R++ +K
Sbjct: 174 VAQDENGSSKGYGFVHYETDEAAQQAIKHVNGMLLNEKKVYVGHHIPKKDRQSKFEEMKA 233
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
F NV+VKN+ TD++ +++F +G +TS+ + R+ DGKS+ FGFVNF + AAKAV
Sbjct: 234 NFTNVYVKNISPEVTDDEFRELFERHGDVTSSSIAREQDGKSRGFGFVNFTTHEAAAKAV 293
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
E LN K +E YVG+AQKK ERE+EL+ +E A E K+QG+NLYIKNL D +DD+
Sbjct: 294 EELNNKDLHGQELYVGRAQKKHEREEELRKSYEAARIEKASKYQGVNLYIKNLDDDVDDD 353
Query: 327 KLKELFSEFGTITSCKVMR 345
KL+ +F+EFG ITS KVMR
Sbjct: 354 KLRIMFAEFGPITSAKVMR 372
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 157/293 (53%), Gaps = 21/293 (7%)
Query: 117 TGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAI 175
+ ++++ LD S+ L + FS G + S ++ D + +S G+ +V + + + A+
Sbjct: 54 SASLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNSTPDGEKAL 113
Query: 176 DKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTI 235
++LN LI + + +R+ KT NVF+KNLD + ++ L F +G I
Sbjct: 114 EELNYTLIKGRPCRI----MWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNI 169
Query: 236 TSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSERE---Q 292
S V +D +G SK +GFV++E + A +A++ +NG ++++ YVG K +R+ +
Sbjct: 170 LSCKVAQDENGSSKGYGFVHYETDEAAQQAIKHVNGMLLNEKKVYVGHHIPKKDRQSKFE 229
Query: 293 ELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISK 352
E+K F N+Y+KN+ + D++ +ELF G +TS + R+ G S+
Sbjct: 230 EMKANF-------------TNVYVKNISPEVTDDEFRELFERHGDVTSSSIAREQDGKSR 276
Query: 353 GSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
G GFV F+T E A++A+ E+N K + + LYV AQ+K ER L+ + R
Sbjct: 277 GFGFVNFTTHEAAAKAVEELNNKDLHGQELYVGRAQKKHEREEELRKSYEAAR 329
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 53/79 (67%)
Query: 496 ITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEA 555
I+AL ++ A P QQ+ +LGE ++P ++ + + A K+TGMLLEMD +E+++L+E A
Sbjct: 645 ISALQAQISGAPPAQQKQMLGEMIFPKIQAINGELAGKITGMLLEMDNSELINLIEDDAA 704
Query: 556 LKAKVAEAMEVLRSVAQQQ 574
LK+KV EA+ V + Q
Sbjct: 705 LKSKVDEALAVYDEYVKTQ 723
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 39/45 (86%)
Query: 355 GFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQA 399
GFV FS P++A++A+AEMN +MI KPLYVA+AQRK+ R+++L+A
Sbjct: 430 GFVCFSNPDDATKAVAEMNQRMINGKPLYVALAQRKDVRKSQLEA 474
Score = 42.4 bits (98), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 251 FGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFE 299
FGFV F N DDA KAV +N + + + YV AQ+K R+ +L+ +
Sbjct: 429 FGFVCFSNPDDATKAVAEMNQRMINGKPLYVALAQRKDVRKSQLEASIQ 477
>gi|408395605|gb|EKJ74783.1| hypothetical protein FPSE_05031 [Fusarium pseudograminearum CS3096]
Length = 749
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 174/320 (54%), Positives = 244/320 (76%), Gaps = 2/320 (0%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVG+LD +VT++ L++LFSQ+G V S+RVCRD TRRSLGY YVNY D +AL
Sbjct: 58 SASLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNATPDGEKAL 117
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LN+T + + RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++FGNILSCK
Sbjct: 118 EELNYTIIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCK 177
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKT 206
+A D +G SKG+GFV +E E+A AI +NGML+N+K+V+VGH + K++R++ +K
Sbjct: 178 VAQDETGASKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKDRQSKFEEMKA 237
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
F NV+VKN+ T++D +++F +YG +TS+ + RD +GKS+ FGFVNF + A KAV
Sbjct: 238 NFTNVYVKNIAADVTEDDFRQLFEKYGDVTSSSLARDQEGKSRGFGFVNFTTHESAFKAV 297
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
+ LN K F ++ YVG+AQKK ERE+EL+ +E A E +K+QG+NLYIKNL D +DD+
Sbjct: 298 DELNNKDFHGQDLYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLDDDVDDD 357
Query: 327 KLKELFSEFGTITSCKVMRD 346
KL+E+F +FG+ITS KVMR+
Sbjct: 358 KLREMFKDFGSITSAKVMRE 377
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 155/293 (52%), Gaps = 21/293 (7%)
Query: 117 TGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAI 175
+ ++++ LD S+ L + FS G + S ++ D + +S G+ +V + + A+
Sbjct: 58 SASLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNATPDGEKAL 117
Query: 176 DKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTI 235
++LN +I + + +R+ KT NVF+KNLD + ++ L F +G I
Sbjct: 118 EELNYTIIKGRPCRI----MWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNI 173
Query: 236 TSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSERE---Q 292
S V +D G SK +GFV++E + A++A++ +NG ++++ YVG K +R+ +
Sbjct: 174 LSCKVAQDETGASKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKDRQSKFE 233
Query: 293 ELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISK 352
E+K F N+Y+KN+ + ++ ++LF ++G +TS + RD G S+
Sbjct: 234 EMKANF-------------TNVYVKNIAADVTEDDFRQLFEKYGDVTSSSLARDQEGKSR 280
Query: 353 GSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
G GFV F+T E A +A+ E+N K + LYV AQ+K ER L+ + R
Sbjct: 281 GFGFVNFTTHESAFKAVDELNNKDFHGQDLYVGRAQKKHEREEELRKSYEAAR 333
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/343 (29%), Positives = 161/343 (46%), Gaps = 77/343 (22%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ +LD + + L+D F+ G +LS +V +D T S GYG+V+Y A++A+
Sbjct: 148 NVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQD-ETGASKGYGFVHYETDEAASQAIKH 206
Query: 91 LNFTPLNNKSIRIMYSHRDPSI--------RKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
+N LN K + + H P K+ N+++KN+ + F +G
Sbjct: 207 VNGMLLNEKKVYV--GHHIPKKDRQSKFEEMKANFTNVYVKNIAADVTEDDFRQLFEKYG 264
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET- 201
++ S +A D G+S+GFGFV F ESA A+D+LN + + ++VG +K ERE
Sbjct: 265 DVTSSSLARDQEGKSRGFGFVNFTTHESAFKAVDELNNKDFHGQDLYVGRAQKKHEREEE 324
Query: 202 -----------VAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD----GD- 245
A K + N+++KNLD+ D+ L+++F ++G+ITSA VMR+ GD
Sbjct: 325 LRKSYEAARLEKANKYQGVNLYIKNLDDDVDDDKLREMFKDFGSITSAKVMRETPTEGDE 384
Query: 246 -------------------------------------------------GKSKCFGFVNF 256
GKSK FGFV F
Sbjct: 385 DKKEKDESDKENQEEVKEEVKEESKEESKDETKEGEEDKKAEKKSDKKLGKSKGFGFVCF 444
Query: 257 ENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFE 299
N DDA KAV +N + F+ + YV AQ+K R+ +L+ +
Sbjct: 445 SNPDDATKAVAEMNQRMFNGKPLYVALAQRKDVRKSQLEASIQ 487
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 98/303 (32%), Positives = 141/303 (46%), Gaps = 75/303 (24%)
Query: 349 GISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQF---SQMR 405
G SKG GFV FS P++A++A+AEMN +M KPLYVA+AQRK+ R+++L+A +Q+R
Sbjct: 434 GKSKGFGFVCFSNPDDATKAVAEMNQRMFNGKPLYVALAQRKDVRKSQLEASIQARNQLR 493
Query: 406 -----------------PVAMGPSVPP-RMPM------YPPGPSGLGQ----QFLY-GQA 436
PV P P MP +P G G+ Q QF Y Q
Sbjct: 494 MQQAAAVAGMPQQYMQPPVYFAPGQQPGYMPQGGRGVPFPQGAMGMPQGRPGQFPYPQQG 553
Query: 437 PPAIIPPQMPPR--GHAYRYPLGRNMQDFP-FDM----------GAGS------------ 471
+P QMPP G ++P G P F G G+
Sbjct: 554 GRGGVPQQMPPNMYGMPGQFPPGYGQPGTPQFMAAMQAQQAALGGRGAPQGGRGGPQGMP 613
Query: 472 -MLPVPVDMGAGIPRRDASV--------------GQPMPITALST---ALANASPEQQRT 513
M P+ +M P + G+ LS+ LA+A P QQ+
Sbjct: 614 GMPPMAGNMPGFPPNNNRQGGRGGPGRNGNGPQGGRGADAAGLSSLQQQLASAPPPQQKQ 673
Query: 514 LLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQ 573
+LGE ++P ++ + D A K+TGMLLEM+ E+++L+E ALKAKV EA+ V +
Sbjct: 674 ILGELIFPKIQAINADLAGKITGMLLEMENPELVNLIEDESALKAKVDEALAVYDEYVKT 733
Query: 574 QAN 576
Q++
Sbjct: 734 QSS 736
>gi|440893983|gb|ELR46563.1| Polyadenylate-binding protein 4-like protein [Bos grunniens mutus]
Length = 370
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 185/367 (50%), Positives = 259/367 (70%), Gaps = 6/367 (1%)
Query: 26 QFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAA 85
++ SLYVGDL +VT+ L+ FS VG VLS+R+CRDL TRRSLGY YVN+ ADA
Sbjct: 6 KYRQASLYVGDLHADVTEDLLFKKFSAVGPVLSIRICRDLVTRRSLGYAYVNFLQLADAQ 65
Query: 86 RALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNIL 145
+ALD +NF + KSIR+M+S RD +RKSG GN+FIKNLD+SID+K L++ FS+FG IL
Sbjct: 66 KALDTMNFDLIKGKSIRLMWSQRDAYLRKSGIGNVFIKNLDRSIDNKTLYEHFSAFGKIL 125
Query: 146 SCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIK 205
S K+ +D G S+G+ FV F+N+ +A AI+++NG L+ D ++FVG F +++RE +
Sbjct: 126 SSKVMSDDHG-SRGYAFVHFQNQIAADRAIEEMNGALLKDCRLFVGRFKSRKDREA-EFQ 183
Query: 206 TK---FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDA 262
K F NV++KN + DE L ++F +YG S VM D GKSK FGFV+F++ + A
Sbjct: 184 NKAHEFTNVYIKNFGDEMDDERLNEVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDSHEAA 243
Query: 263 AKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDS 322
+AVE +NGK + + +VG+AQKK+ER+ ELK FEQ E + QG LYIKNL ++
Sbjct: 244 KRAVEEMNGKDINGQLLFVGRAQKKAERQAELKQMFEQLKHERFRRCQGAKLYIKNLDET 303
Query: 323 IDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPL 382
IDDEKL+ FS FG+I+ KVM++ G SKG G + FS+ EEA++A+ EMNG+++ SKPL
Sbjct: 304 IDDEKLRREFSSFGSISRVKVMQEE-GRSKGFGLICFSSAEEATKAMTEMNGRILGSKPL 362
Query: 383 YVAVAQR 389
+A+AQ+
Sbjct: 363 NIALAQK 369
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 107/289 (37%), Positives = 163/289 (56%), Gaps = 16/289 (5%)
Query: 118 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATD-GSGQSKGFGFVQFENKESAQNAID 176
++++ +L + L FS+ G +LS +I D + +S G+ +V F AQ A+D
Sbjct: 10 ASLYVGDLHADVTEDLLFKKFSAVGPVLSIRICRDLVTRRSLGYAYVNFLQLADAQKALD 69
Query: 177 KLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTIT 236
+N LI K + L +R+ K+ NVF+KNLD S ++ L + F +G I
Sbjct: 70 TMNFDLIKGKSIR----LMWSQRDAYLRKSGIGNVFIKNLDRSIDNKTLYEHFSAFGKIL 125
Query: 237 SAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKG 296
S+ VM D G S+ + FV+F+N A +A+E +NG D +VG+ + + +RE E +
Sbjct: 126 SSKVMSDDHG-SRGYAFVHFQNQIAADRAIEEMNGALLKDCRLFVGRFKSRKDREAEFQN 184
Query: 297 QFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGF 356
+ + N+YIKN GD +DDE+L E+FS++G S KVM D SG SKG GF
Sbjct: 185 KAHEFT----------NVYIKNFGDEMDDERLNEVFSKYGKTLSVKVMTDSSGKSKGFGF 234
Query: 357 VAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
V+F + E A RA+ EMNGK I + L+V AQ+K ER+A L+ F Q++
Sbjct: 235 VSFDSHEAAKRAVEEMNGKDINGQLLFVGRAQKKAERQAELKQMFEQLK 283
>gi|359322009|ref|XP_850457.3| PREDICTED: uncharacterized protein LOC483825 [Canis lupus
familiaris]
Length = 1009
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 175/369 (47%), Positives = 255/369 (69%), Gaps = 6/369 (1%)
Query: 26 QFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAA 85
++ SLYVGDLD VT+ L+ FS G VLS+R+CRDL TRRSLGY YVN+ ADA
Sbjct: 144 KYRQASLYVGDLDAEVTEDALFRKFSAAGPVLSIRICRDLLTRRSLGYAYVNFLRLADAQ 203
Query: 86 RALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNIL 145
RALD +NF L + +R+M+S RD +RKSG GN+FIKNLD+S+D KAL + FS+FG IL
Sbjct: 204 RALDTMNFDVLRGRPLRLMWSQRDAHLRKSGVGNVFIKNLDRSVDDKALFERFSAFGKIL 263
Query: 146 SCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIK 205
S K+ +D G S+G+ FV F+ + +A AI+ +NG + ++FVG F +Q RE ++
Sbjct: 264 SSKVVSDERG-SRGYAFVHFQEQSAADRAIEHMNGAQLRGCRLFVGRFQSRQAREA-ELR 321
Query: 206 TK---FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDA 262
++ F N+++KN D L+ +F EYG S VM D G+S+ FGFV+FE+ + A
Sbjct: 322 SRAGEFTNLYIKNFGGRMDDARLRAVFSEYGKTLSVKVMTDASGRSRGFGFVSFESHEAA 381
Query: 263 AKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDS 322
+AVEALNG++ D + +VG+AQ+K+ER+ EL+ FEQ ++ + + QG LY+KNL D+
Sbjct: 382 RRAVEALNGRQVDGQPLFVGRAQRKAERQAELRRAFEQRQQDGLRRAQGAKLYVKNLDDA 441
Query: 323 IDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPL 382
+D+++L+ FS FG ++ K+MR+ G SKG G + FS+ +EA+RALAEMNG+++ SKPL
Sbjct: 442 VDEDRLRREFSGFGAVSRVKIMRE-EGRSKGFGLICFSSADEAARALAEMNGRVLGSKPL 500
Query: 383 YVAVAQRKE 391
+A+AQ +
Sbjct: 501 SIALAQSRR 509
>gi|403271841|ref|XP_003927812.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Saimiri boliviensis boliviensis]
Length = 647
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 184/366 (50%), Positives = 256/366 (69%), Gaps = 4/366 (1%)
Query: 26 QFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAA 85
++ SLYVGDL +VT+ L+ FS G VLS+R+CRD TRRSLGY YVN+ + ADA
Sbjct: 283 KYRMASLYVGDLHADVTEDLLFRKFSAAGPVLSIRICRDQLTRRSLGYAYVNFLHLADAQ 342
Query: 86 RALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNIL 145
+ALD +NF + KSIR+M+S RD +R+SG GN+FIKNLDKSID+K L++ FS+FG IL
Sbjct: 343 KALDTMNFDVIQGKSIRLMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSAFGRIL 402
Query: 146 SCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET--VA 203
S K+ +D G SKG+ FV F+N+ +A AI+++NG L+ +VFVG F +Q+RE +
Sbjct: 403 SSKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGKLLQGCKVFVGRFKSRQDREAELRS 461
Query: 204 IKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAA 263
++F NV++KN DE LK +F +YG S VM D GKSK FGFV+F++ + A
Sbjct: 462 KASEFTNVYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDSHEAAK 521
Query: 264 KAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSI 323
KAVE +NG+ + + +V +AQKK ER+ ELK FEQ E + Q + LY+KNL D+I
Sbjct: 522 KAVEEMNGRDINGQLIFVARAQKKVERQAELKQMFEQLKNERIRGCQVVKLYVKNLDDTI 581
Query: 324 DDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLY 383
DDEKL++ FS FG+I+ KVM++ G SKG G + FS+PE+A +A+ EMNG+++ SKPL
Sbjct: 582 DDEKLRKEFSSFGSISRVKVMQE-EGQSKGFGLICFSSPEDALKAMTEMNGRILGSKPLS 640
Query: 384 VAVAQR 389
+A+AQR
Sbjct: 641 IALAQR 646
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 104/288 (36%), Positives = 168/288 (58%), Gaps = 16/288 (5%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDK 177
++++ +L + L FS+ G +LS +I D + +S G+ +V F + AQ A+D
Sbjct: 288 SLYVGDLHADVTEDLLFRKFSAAGPVLSIRICRDQLTRRSLGYAYVNFLHLADAQKALDT 347
Query: 178 LNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITS 237
+N +I K + L +R+ ++ NVF+KNLD+S ++ L + F +G I S
Sbjct: 348 MNFDVIQGKSIR----LMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSAFGRILS 403
Query: 238 AVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQ 297
+ VM D G SK + FV+F+N A +A+E +NGK + +VG+ + + +RE EL+ +
Sbjct: 404 SKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGKLLQGCKVFVGRFKSRQDREAELRSK 462
Query: 298 FEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFV 357
+ N+YIKN G +DDE+LK++FS++G S KVM D SG SKG GFV
Sbjct: 463 ASEFT----------NVYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFV 512
Query: 358 AFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
+F + E A +A+ EMNG+ I + ++VA AQ+K ER+A L+ F Q++
Sbjct: 513 SFDSHEAAKKAVEEMNGRDINGQLIFVARAQKKVERQAELKQMFEQLK 560
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 108/212 (50%), Gaps = 20/212 (9%)
Query: 198 ERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNF 256
E V K + +++V +L T++ L + F G + S + RD +S + +VNF
Sbjct: 276 EEMDVEAKYRMASLYVGDLHADVTEDLLFRKFSAAGPVLSIRICRDQLTRRSLGYAYVNF 335
Query: 257 ENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGL-NLY 315
+ DA KA++ +N FD Q KS R + ++ + G+ N++
Sbjct: 336 LHLADAQKALDTMN---FD-------VIQGKSIR-------LMWSQRDAYLRRSGIGNVF 378
Query: 316 IKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGK 375
IKNL SID++ L E FS FG I S KVM D G SKG FV F A RA+ EMNGK
Sbjct: 379 IKNLDKSIDNKTLYEHFSAFGRILSSKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGK 437
Query: 376 MIVSKPLYVAVAQRKEERRARLQAQFSQMRPV 407
++ ++V + +++R A L+++ S+ V
Sbjct: 438 LLQGCKVFVGRFKSRQDREAELRSKASEFTNV 469
>gi|432097499|gb|ELK27684.1| Polyadenylate-binding protein 4-like protein [Myotis davidii]
Length = 370
Score = 368 bits (945), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 182/366 (49%), Positives = 263/366 (71%), Gaps = 4/366 (1%)
Query: 26 QFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAA 85
++ SLYVGDL +VT++ L+ FS VG VLS+R+CRDL TR SLGY YVN+ + ADA
Sbjct: 6 KYRQASLYVGDLPPDVTENMLFLKFSTVGTVLSIRICRDLVTRCSLGYAYVNFLHVADAQ 65
Query: 86 RALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNIL 145
RALD +NF + +SIR+M+S RD +RKSG GN+FIKNLDKSID+K L++ FS FG IL
Sbjct: 66 RALDTMNFDVIQGQSIRLMWSQRDAYLRKSGIGNVFIKNLDKSIDNKTLYEHFSVFGKIL 125
Query: 146 SCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIK 205
S K+ D G S+G+GFV F+N+ +A AI+++NG+L+ D ++FVG F +++RE
Sbjct: 126 SSKVMCDDQG-SRGYGFVHFQNQAAADRAIEEMNGVLLKDFRLFVGPFKNRRDREAELQN 184
Query: 206 --TKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAA 263
++F N+++KN + DE LK+ F YG I S VM D GKSK FGFV+F+ + A
Sbjct: 185 KASEFTNIYIKNFGDEMDDEKLKEFFSHYGKIVSVKVMTDSSGKSKGFGFVSFDTHEAAK 244
Query: 264 KAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSI 323
+AV+ +NG++ ++ +VG+AQKK+ER+ ELK FEQ +E + +G +Y+KNL ++I
Sbjct: 245 RAVDIVNGREIFGQQVFVGRAQKKAERQAELKQLFEQRKQERSWRVRGTKIYVKNLDETI 304
Query: 324 DDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLY 383
D+EKL++ FS FG+I KVM++ G S+G G + FS+PEEA+RA+AEMNG+++ SKP+
Sbjct: 305 DEEKLRKAFSSFGSIIRVKVMQEE-GRSRGFGLICFSSPEEAARAMAEMNGRLLGSKPVN 363
Query: 384 VAVAQR 389
+A+AQR
Sbjct: 364 IALAQR 369
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 107/289 (37%), Positives = 163/289 (56%), Gaps = 16/289 (5%)
Query: 118 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQ-SKGFGFVQFENKESAQNAID 176
++++ +L + L FS+ G +LS +I D + S G+ +V F + AQ A+D
Sbjct: 10 ASLYVGDLPPDVTENMLFLKFSTVGTVLSIRICRDLVTRCSLGYAYVNFLHVADAQRALD 69
Query: 177 KLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTIT 236
+N +I + + L +R+ K+ NVF+KNLD+S ++ L + F +G I
Sbjct: 70 TMNFDVIQGQSIR----LMWSQRDAYLRKSGIGNVFIKNLDKSIDNKTLYEHFSVFGKIL 125
Query: 237 SAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKG 296
S+ VM D G S+ +GFV+F+N A +A+E +NG D +VG + + +RE EL+
Sbjct: 126 SSKVMCDDQG-SRGYGFVHFQNQAAADRAIEEMNGVLLKDFRLFVGPFKNRRDREAELQN 184
Query: 297 QFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGF 356
+ + N+YIKN GD +DDEKLKE FS +G I S KVM D SG SKG GF
Sbjct: 185 KASEFT----------NIYIKNFGDEMDDEKLKEFFSHYGKIVSVKVMTDSSGKSKGFGF 234
Query: 357 VAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
V+F T E A RA+ +NG+ I + ++V AQ+K ER+A L+ F Q +
Sbjct: 235 VSFDTHEAAKRAVDIVNGREIFGQQVFVGRAQKKAERQAELKQLFEQRK 283
>gi|431899704|gb|ELK07658.1| Polyadenylate-binding protein 4-like protein [Pteropus alecto]
Length = 370
Score = 368 bits (945), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 184/366 (50%), Positives = 259/366 (70%), Gaps = 4/366 (1%)
Query: 26 QFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAA 85
++ SLYVGDL VT+ L+ FS VG VLS+R+CRDL T+RSLGY YVN+ + ADA
Sbjct: 6 KYRQASLYVGDLHAEVTEDLLFKKFSAVGPVLSIRICRDLVTQRSLGYAYVNFLHLADAQ 65
Query: 86 RALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNIL 145
+ALD +NF + KSIR+M+S RD +RKSG GN+FIKNL KSID+K L++ FS+FG IL
Sbjct: 66 KALDTMNFDMIKGKSIRLMWSQRDAYLRKSGIGNVFIKNLHKSIDNKTLYEHFSAFGKIL 125
Query: 146 SCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER--ETVA 203
S K+ +D +G S+G+ FV F+++ +A AI+ +NG L+ ++FVG F +++R E
Sbjct: 126 SSKVMSDDAG-SRGYAFVHFQSQTAADRAIEAMNGALLKGCRLFVGPFKNRKDRQAELQN 184
Query: 204 IKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAA 263
+F NV++KN + DE LK+IF +G I S VM D G+SK FGFV+F++ + A
Sbjct: 185 KANEFTNVYIKNFGDDMDDERLKEIFSHFGKILSVKVMTDSRGRSKGFGFVSFDSHEAAQ 244
Query: 264 KAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSI 323
+AVE +NGK + +VG+AQKK+ER+ ELK FEQ +E +F+G+ LYIKNL DSI
Sbjct: 245 RAVEIMNGKDLSGQPLFVGRAQKKAERQAELKLMFEQMKQERYRRFRGVKLYIKNLDDSI 304
Query: 324 DDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLY 383
DDE+L+ FS FG+I+ KVM++ G SKG G + FS+PEEA++A+ EMNG+++ SK L
Sbjct: 305 DDERLRREFSSFGSISRVKVMKEE-GRSKGFGLICFSSPEEATKAMVEMNGRILGSKSLN 363
Query: 384 VAVAQR 389
+A+AQR
Sbjct: 364 IALAQR 369
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 108/288 (37%), Positives = 165/288 (57%), Gaps = 16/288 (5%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQ-SKGFGFVQFENKESAQNAIDK 177
++++ +L + L FS+ G +LS +I D Q S G+ +V F + AQ A+D
Sbjct: 11 SLYVGDLHAEVTEDLLFKKFSAVGPVLSIRICRDLVTQRSLGYAYVNFLHLADAQKALDT 70
Query: 178 LNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITS 237
+N +I K + L +R+ K+ NVF+KNL +S ++ L + F +G I S
Sbjct: 71 MNFDMIKGKSIR----LMWSQRDAYLRKSGIGNVFIKNLHKSIDNKTLYEHFSAFGKILS 126
Query: 238 AVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQ 297
+ VM D D S+ + FV+F++ A +A+EA+NG +VG + + +R+ EL+ +
Sbjct: 127 SKVMSD-DAGSRGYAFVHFQSQTAADRAIEAMNGALLKGCRLFVGPFKNRKDRQAELQNK 185
Query: 298 FEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFV 357
++F N+YIKN GD +DDE+LKE+FS FG I S KVM D G SKG GFV
Sbjct: 186 --------ANEFT--NVYIKNFGDDMDDERLKEIFSHFGKILSVKVMTDSRGRSKGFGFV 235
Query: 358 AFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
+F + E A RA+ MNGK + +PL+V AQ+K ER+A L+ F QM+
Sbjct: 236 SFDSHEAAQRAVEIMNGKDLSGQPLFVGRAQKKAERQAELKLMFEQMK 283
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 103/203 (50%), Gaps = 26/203 (12%)
Query: 201 TVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD-GDGKSKCFGFVNFENA 259
V K + +++V +L T++ L K F G + S + RD +S + +VNF +
Sbjct: 2 NVEAKYRQASLYVGDLHAEVTEDLLFKKFSAVGPVLSIRICRDLVTQRSLGYAYVNFLHL 61
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKF---QGL-NLY 315
DA KA++ +N FD +KG+ + M D + G+ N++
Sbjct: 62 ADAQKALDTMN---FD-----------------MIKGKSIRLMWSQRDAYLRKSGIGNVF 101
Query: 316 IKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGK 375
IKNL SID++ L E FS FG I S KVM D +G S+G FV F + A RA+ MNG
Sbjct: 102 IKNLHKSIDNKTLYEHFSAFGKILSSKVMSDDAG-SRGYAFVHFQSQTAADRAIEAMNGA 160
Query: 376 MIVSKPLYVAVAQRKEERRARLQ 398
++ L+V + +++R+A LQ
Sbjct: 161 LLKGCRLFVGPFKNRKDRQAELQ 183
>gi|291401234|ref|XP_002716993.1| PREDICTED: poly(A) binding protein, cytoplasmic 4-like [Oryctolagus
cuniculus]
Length = 370
Score = 367 bits (943), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 185/366 (50%), Positives = 262/366 (71%), Gaps = 6/366 (1%)
Query: 26 QFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAA 85
++ SLYVGDL +VT+ L+ FS+VG VLS+R+CRDL TRRSLGY YVN+ ADA
Sbjct: 6 KYRMASLYVGDLHSDVTEDLLFKKFSRVGPVLSIRICRDLVTRRSLGYAYVNFLQLADAQ 65
Query: 86 RALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNIL 145
+ALD +NF + K+IR+M+S RD +RKSG GN+FIKNLDKSID+K+L++ FS+FG IL
Sbjct: 66 KALDTMNFDVVKGKAIRLMWSQRDAYLRKSGIGNVFIKNLDKSIDNKSLYECFSAFGKIL 125
Query: 146 SCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIK 205
S K+ +D G SKG+ FV F+++ +A AI+++NG + D +VFVG F +++RE ++
Sbjct: 126 SSKVMSDDRG-SKGYAFVHFQSQSAADRAIEEMNGKFLKDCKVFVGRFKSRKDREA-ELR 183
Query: 206 TK---FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDA 262
K F NV++KN + DE L+++F YG I S VM + GKS+ FGFV+F++ + A
Sbjct: 184 NKASEFTNVYIKNFGDDMDDERLREVFSTYGRILSVKVMTNSCGKSRGFGFVSFDSHEAA 243
Query: 263 AKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDS 322
KAVE +NGK+ + + +VG+AQKK ER+ ELK FEQ KE + QG LYIKNL ++
Sbjct: 244 RKAVEEMNGKEVNGQPIFVGRAQKKVERQAELKQMFEQLKKERIRGCQGAKLYIKNLDEN 303
Query: 323 IDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPL 382
IDDEKL++ FS FG+I+ KVM++ G SKG G + FS+ E+A+RA+ MNG+++ SKPL
Sbjct: 304 IDDEKLRKEFSSFGSISRVKVMQEE-GQSKGFGLICFSSSEDAARAMTVMNGRILGSKPL 362
Query: 383 YVAVAQ 388
+A+AQ
Sbjct: 363 NIALAQ 368
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 103/289 (35%), Positives = 167/289 (57%), Gaps = 16/289 (5%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATD-GSGQSKGFGFVQFENKESAQNAIDK 177
++++ +L + L FS G +LS +I D + +S G+ +V F AQ A+D
Sbjct: 11 SLYVGDLHSDVTEDLLFKKFSRVGPVLSIRICRDLVTRRSLGYAYVNFLQLADAQKALDT 70
Query: 178 LNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITS 237
+N ++ K + L +R+ K+ NVF+KNLD+S ++ L + F +G I S
Sbjct: 71 MNFDVVKGKAIR----LMWSQRDAYLRKSGIGNVFIKNLDKSIDNKSLYECFSAFGKILS 126
Query: 238 AVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQ 297
+ VM D G SK + FV+F++ A +A+E +NGK D + +VG+ + + +RE EL+ +
Sbjct: 127 SKVMSDDRG-SKGYAFVHFQSQSAADRAIEEMNGKFLKDCKVFVGRFKSRKDREAELRNK 185
Query: 298 FEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFV 357
+ N+YIKN GD +DDE+L+E+FS +G I S KVM + G S+G GFV
Sbjct: 186 ASEFT----------NVYIKNFGDDMDDERLREVFSTYGRILSVKVMTNSCGKSRGFGFV 235
Query: 358 AFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRP 406
+F + E A +A+ EMNGK + +P++V AQ+K ER+A L+ F Q++
Sbjct: 236 SFDSHEAARKAVEEMNGKEVNGQPIFVGRAQKKVERQAELKQMFEQLKK 284
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 106/212 (50%), Gaps = 26/212 (12%)
Query: 201 TVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD-GDGKSKCFGFVNFENA 259
VA K + +++V +L T++ L K F G + S + RD +S + +VNF
Sbjct: 2 NVAAKYRMASLYVGDLHSDVTEDLLFKKFSRVGPVLSIRICRDLVTRRSLGYAYVNFLQL 61
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKF---QGL-NLY 315
DA KA++ +N FD +KG+ + M D + G+ N++
Sbjct: 62 ADAQKALDTMN---FD-----------------VVKGKAIRLMWSQRDAYLRKSGIGNVF 101
Query: 316 IKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGK 375
IKNL SID++ L E FS FG I S KVM D G SKG FV F + A RA+ EMNGK
Sbjct: 102 IKNLDKSIDNKSLYECFSAFGKILSSKVMSDDRG-SKGYAFVHFQSQSAADRAIEEMNGK 160
Query: 376 MIVSKPLYVAVAQRKEERRARLQAQFSQMRPV 407
+ ++V + +++R A L+ + S+ V
Sbjct: 161 FLKDCKVFVGRFKSRKDREAELRNKASEFTNV 192
>gi|46128087|ref|XP_388597.1| hypothetical protein FG08421.1 [Gibberella zeae PH-1]
Length = 784
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 198/467 (42%), Positives = 288/467 (61%), Gaps = 49/467 (10%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVG+LD +VT++ L++LFSQ+G V S+RVCRD TRRSLGY YVNY D +AL
Sbjct: 58 SASLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNATPDGEKAL 117
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LN+T + + RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++FGNILSCK
Sbjct: 118 EELNYTIIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCK 177
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKT 206
+A D +G SKG+GFV +E E+A AI +NGML+N+K+V+VGH + K++R++ +K
Sbjct: 178 VAQDETGASKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKDRQSKFEEMKA 237
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
F NV+VKN+ T++D +++F +YG +TS+ + RD +GKS+ FGFVNF + A+KAV
Sbjct: 238 NFTNVYVKNIAADVTEDDFRQLFEKYGDVTSSSLARDQEGKSRGFGFVNFTTHESASKAV 297
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFE-------QAMKETVDKFQGLNLYIKNL 319
+ LN K F ++ YVG+AQKK ERE+EL+ +E Q M + + +
Sbjct: 298 DELNNKDFHGQDLYVGRAQKKHEREEELRKSYEAARRGEGQQMNKECGSITSTKVMRETP 357
Query: 320 GDSIDDEKLK-ELFSEFGTITSCKVMRDPS------------------------GISKGS 354
+ ++++K K E E +V +P G SKG
Sbjct: 358 TEVVEEKKEKAETVKENQEEVKDEVKEEPKEESKDETKEGEEDKKAEKKSDKKLGKSKGF 417
Query: 355 GFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVP 414
GFV FS P++A++A+AEMN +M KPLYVA+AQRK+ R+++L+A + M +V
Sbjct: 418 GFVCFSNPDDATKAVAEMNQRMFNGKPLYVALAQRKDVRKSQLEASIQARNQIRMQQAV- 476
Query: 415 PRMPMYPPGPSGLGQQFLYGQAPPAIIPPQ----MPPRGHAYRYPLG 457
+G+ QQ++ Q P P Q MP G +P G
Sbjct: 477 --------AHAGMPQQYM--QPPVYFAPGQQPGFMPQGGRGVPFPQG 513
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 54/81 (66%)
Query: 496 ITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEA 555
+++L LA+A P QQ+ +LGE ++P ++ + D A K+TGMLLEM+ E+++L+E A
Sbjct: 634 LSSLQQQLASAPPPQQKQILGELIFPKIQAINADLAGKITGMLLEMENPELVNLIEDESA 693
Query: 556 LKAKVAEAMEVLRSVAQQQAN 576
LKAKV EA+ V + Q +
Sbjct: 694 LKAKVDEALAVYDEYVKTQTS 714
>gi|323305308|gb|EGA59055.1| Pab1p [Saccharomyces cerevisiae FostersB]
gi|323333819|gb|EGA75210.1| Pab1p [Saccharomyces cerevisiae AWRI796]
Length = 466
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 214/486 (44%), Positives = 292/486 (60%), Gaps = 42/486 (8%)
Query: 104 MYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFV 163
M+S RDPS+RK G+GNIFIKNL ID+KAL+DTFS FG+ILS KIATD +G+SKGFGFV
Sbjct: 1 MWSQRDPSLRKKGSGNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGKSKGFGFV 60
Query: 164 QFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK--FNNVFVKNLDESTT 221
FE + +A+ AID LNGML+N ++++V L ++ER++ +TK + N++VKN++ TT
Sbjct: 61 HFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETT 120
Query: 222 DEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYV 281
DE +++F ++G I SA + +D DGK K FGFVN+E +DA KAVEALN + + + YV
Sbjct: 121 DEQFQELFAKFGPIVSASLEKDADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYV 180
Query: 282 GKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSC 341
G+AQKK+ER LK Q+E E + K+QG+NL++KNL DS+DDEKL+E F+ +GTITS
Sbjct: 181 GRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKLEEEFAPYGTITSA 240
Query: 342 KVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQF 401
KVMR +G SKG GFV FSTPEEA++A+ E N +++ KPLYVA+AQRK+ RR++L Q
Sbjct: 241 KVMRTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKDVRRSQLAQQI 300
Query: 402 ---SQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPPQMPPRGHAYRYPLGR 458
+QMR + P GQ P + MPPRG + P +
Sbjct: 301 QARNQMRYQQATAAAAAAAAGMP------------GQFMPPMFYGVMPPRGVPFNGPNPQ 348
Query: 459 NM--------QDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALSTALANASPEQ 510
M P G + VP G PR Q ++
Sbjct: 349 QMNPMGGMPKNGMPPQFRNGPVYGVPPQ--GGFPRNANDNNQ-------------FYQQK 393
Query: 511 QRTLLGESLYPLV--EQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLR 568
QR LGE LY V + +AA K+TGM+L++ EV LLES E + EA
Sbjct: 394 QRQALGEQLYKKVSAKTSNEEAAGKITGMILDLPPQEVFPLLESDELFEQHYKEASAAYE 453
Query: 569 SVAQQQ 574
S ++Q
Sbjct: 454 SFKKEQ 459
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 155/289 (53%), Gaps = 19/289 (6%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ ++++ +L ++ + LYD FS G +LS ++ D +S G+G+V++ A A+
Sbjct: 14 SGNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATD-ENGKSKGFGFVHFEEEGAAKEAI 72
Query: 89 DVLNFTPLNNKSI----RIMYSHRDPSIR--KSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
D LN LN + I + RD + K+ N+++KN++ + + F+ FG
Sbjct: 73 DALNGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELFAKFG 132
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 202
I+S + D G+ KGFGFV +E E A A++ LN +N ++++VG +K ER V
Sbjct: 133 PIVSASLEKDADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQKKNERMHV 192
Query: 203 AIK----------TKFN--NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKC 250
K K+ N+FVKNLD+S DE L++ F YGTITSA VMR +GKSK
Sbjct: 193 LKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKLEEEFAPYGTITSAKVMRTENGKSKG 252
Query: 251 FGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFE 299
FGFV F ++A KA+ N + + YV AQ+K R +L Q +
Sbjct: 253 FGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKDVRRSQLAQQIQ 301
>gi|351706751|gb|EHB09670.1| Polyadenylate-binding protein 4-like protein [Heterocephalus
glaber]
Length = 370
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 179/366 (48%), Positives = 257/366 (70%), Gaps = 4/366 (1%)
Query: 26 QFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAA 85
++ SLYVGDL T+ L+ FS G VLS+R+CRDL+TR+ LGY YVN+ ADA
Sbjct: 6 KYRLASLYVGDLHAEATEDLLFRKFSAAGPVLSIRICRDLATRQPLGYAYVNFLQLADAQ 65
Query: 86 RALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNIL 145
RALD +NF + + IR+M+S RD +R+SG GN+F+KNLD+S+D+K L++ FS FG IL
Sbjct: 66 RALDTMNFDVIKGRPIRLMWSQRDACLRRSGIGNVFVKNLDRSVDNKTLYEHFSGFGKIL 125
Query: 146 SCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET--VA 203
S K+ +D G SKG+ FV F+++ +A AI+++NG +IND+ VFV F +++RE +
Sbjct: 126 SSKVMSDDQG-SKGYAFVHFQSQSAANCAIEQMNGKVINDRPVFVAPFKPRKDREAELRS 184
Query: 204 IKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAA 263
++F NV++KN + DE L+ +F YG S VM D GKSK FGFV+FE+ + A
Sbjct: 185 RASEFTNVYIKNFGDDMDDERLQGVFSRYGKTLSVKVMTDSSGKSKGFGFVSFESHEAAK 244
Query: 264 KAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSI 323
+AVE +NGK + + +VG+AQKK ER+ ELK FEQ KE + + QG+ LY+KNL D++
Sbjct: 245 RAVEEMNGKDMNGQLVFVGRAQKKVERQAELKHMFEQMKKERIRRCQGVKLYVKNLDDTV 304
Query: 324 DDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLY 383
DDE+L++ FS FG+IT KVM++ G S+G G + FS+PEEA++AL EMNG+++ SK L
Sbjct: 305 DDEQLRKEFSSFGSITRVKVMKEE-GYSRGFGLICFSSPEEAAKALTEMNGRVLGSKALS 363
Query: 384 VAVAQR 389
+A+AQR
Sbjct: 364 IALAQR 369
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/289 (36%), Positives = 161/289 (55%), Gaps = 16/289 (5%)
Query: 118 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATD-GSGQSKGFGFVQFENKESAQNAID 176
++++ +L L FS+ G +LS +I D + Q G+ +V F AQ A+D
Sbjct: 10 ASLYVGDLHAEATEDLLFRKFSAAGPVLSIRICRDLATRQPLGYAYVNFLQLADAQRALD 69
Query: 177 KLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTIT 236
+N +I + + L +R+ ++ NVFVKNLD S ++ L + F +G I
Sbjct: 70 TMNFDVIKGRPIR----LMWSQRDACLRRSGIGNVFVKNLDRSVDNKTLYEHFSGFGKIL 125
Query: 237 SAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKG 296
S+ VM D G SK + FV+F++ A A+E +NGK +DR +V + + +RE EL+
Sbjct: 126 SSKVMSDDQG-SKGYAFVHFQSQSAANCAIEQMNGKVINDRPVFVAPFKPRKDREAELRS 184
Query: 297 QFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGF 356
+ + N+YIKN GD +DDE+L+ +FS +G S KVM D SG SKG GF
Sbjct: 185 RASEFT----------NVYIKNFGDDMDDERLQGVFSRYGKTLSVKVMTDSSGKSKGFGF 234
Query: 357 VAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
V+F + E A RA+ EMNGK + + ++V AQ+K ER+A L+ F QM+
Sbjct: 235 VSFESHEAAKRAVEEMNGKDMNGQLVFVGRAQKKVERQAELKHMFEQMK 283
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 105/206 (50%), Gaps = 18/206 (8%)
Query: 203 AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKC-FGFVNFENADD 261
A K + +++V +L T++ L + F G + S + RD + + +VNF D
Sbjct: 4 AAKYRLASLYVGDLHAEATEDLLFRKFSAAGPVLSIRICRDLATRQPLGYAYVNFLQLAD 63
Query: 262 AAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGD 321
A +A++ +N R + +Q+ + + G N+++KNL
Sbjct: 64 AQRALDTMNFDVIKGRPIRLMWSQRDACLRRSGIG----------------NVFVKNLDR 107
Query: 322 SIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKP 381
S+D++ L E FS FG I S KVM D G SKG FV F + A+ A+ +MNGK+I +P
Sbjct: 108 SVDNKTLYEHFSGFGKILSSKVMSDDQG-SKGYAFVHFQSQSAANCAIEQMNGKVINDRP 166
Query: 382 LYVAVAQRKEERRARLQAQFSQMRPV 407
++VA + +++R A L+++ S+ V
Sbjct: 167 VFVAPFKPRKDREAELRSRASEFTNV 192
>gi|417399827|gb|JAA46899.1| Putative polyadenylate-binding protein rrm superfamily [Desmodus
rotundus]
Length = 370
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 182/367 (49%), Positives = 261/367 (71%), Gaps = 6/367 (1%)
Query: 26 QFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAA 85
++ SLYVGDL +VT+ L+ F+ VG VLS+R+CRDL TRRSLGY YVN+ N ADA
Sbjct: 6 KYRHASLYVGDLPADVTEDMLFRKFNPVGPVLSIRICRDLVTRRSLGYAYVNFLNLADAQ 65
Query: 86 RALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNIL 145
+ LD +NF + KSIR+M+S RD +RKSG GN+FIKNLD+SID+K L++ FS+FG IL
Sbjct: 66 KVLDTMNFDMIQGKSIRLMWSQRDAYLRKSGIGNVFIKNLDRSIDNKMLYEHFSAFGKIL 125
Query: 146 SCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIK 205
S K+ +D G S+G+ FV F+++ +A AI+++NG L+ + ++FVG F ++ERE ++
Sbjct: 126 SSKVMSDDKG-SRGYAFVHFQSQSAADRAIEEMNGALLKNCRLFVGPFKNRKEREA-ELQ 183
Query: 206 TK---FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDA 262
K F NV++KN + DE LK++F +YG I S VM D GKSK FGFV+F+ + A
Sbjct: 184 NKANEFTNVYIKNFGDDMDDERLKEVFSQYGKIVSVKVMTDSSGKSKGFGFVSFDTHEAA 243
Query: 263 AKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDS 322
+AVE +NGK + +VG+AQKK+ER+ ELK FEQ +E + +G+ LYIKNL ++
Sbjct: 244 QRAVEYMNGKDICGQMVFVGRAQKKAERQAELKQMFEQLKRERFGRCRGVKLYIKNLDET 303
Query: 323 IDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPL 382
ID+E+L+ FS FG+++ KVM + G SKG G + FS PEEA++A+AEMNG+++ SK +
Sbjct: 304 IDEEQLRRAFSSFGSMSRVKVM-EEEGRSKGFGLICFSCPEEATKAMAEMNGQVLGSKAI 362
Query: 383 YVAVAQR 389
+A+AQR
Sbjct: 363 NIALAQR 369
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/294 (36%), Positives = 166/294 (56%), Gaps = 16/294 (5%)
Query: 118 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATD-GSGQSKGFGFVQFENKESAQNAID 176
++++ +L + L F+ G +LS +I D + +S G+ +V F N AQ +D
Sbjct: 10 ASLYVGDLPADVTEDMLFRKFNPVGPVLSIRICRDLVTRRSLGYAYVNFLNLADAQKVLD 69
Query: 177 KLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTIT 236
+N +I K + L +R+ K+ NVF+KNLD S ++ L + F +G I
Sbjct: 70 TMNFDMIQGKSIR----LMWSQRDAYLRKSGIGNVFIKNLDRSIDNKMLYEHFSAFGKIL 125
Query: 237 SAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKG 296
S+ VM D G S+ + FV+F++ A +A+E +NG + +VG + + ERE EL+
Sbjct: 126 SSKVMSDDKG-SRGYAFVHFQSQSAADRAIEEMNGALLKNCRLFVGPFKNRKEREAELQN 184
Query: 297 QFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGF 356
+ ++F N+YIKN GD +DDE+LKE+FS++G I S KVM D SG SKG GF
Sbjct: 185 K--------ANEFT--NVYIKNFGDDMDDERLKEVFSQYGKIVSVKVMTDSSGKSKGFGF 234
Query: 357 VAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMG 410
V+F T E A RA+ MNGK I + ++V AQ+K ER+A L+ F Q++ G
Sbjct: 235 VSFDTHEAAQRAVEYMNGKDICGQMVFVGRAQKKAERQAELKQMFEQLKRERFG 288
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 100/182 (54%), Gaps = 22/182 (12%)
Query: 24 GNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPAD 83
N+F T++Y+ + ++ D +L ++FSQ G+++SV+V D S+ +S G+G+V++
Sbjct: 186 ANEF--TNVYIKNFGDDMDDERLKEVFSQYGKIVSVKVMTD-SSGKSKGFGFVSFDTHEA 242
Query: 84 AARALDVLNFTPLNNKSIRI---------------MYSH--RDPSIRKSGTGNIFIKNLD 126
A RA++ +N + + + + M+ R+ R G ++IKNLD
Sbjct: 243 AQRAVEYMNGKDICGQMVFVGRAQKKAERQAELKQMFEQLKRERFGRCRGV-KLYIKNLD 301
Query: 127 KSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDK 186
++ID + L FSSFG++ K+ + G+SKGFG + F E A A+ ++NG ++ K
Sbjct: 302 ETIDEEQLRRAFSSFGSMSRVKVMEE-EGRSKGFGLICFSCPEEATKAMAEMNGQVLGSK 360
Query: 187 QV 188
+
Sbjct: 361 AI 362
>gi|365760982|gb|EHN02660.1| Pab1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 466
Score = 365 bits (936), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 214/486 (44%), Positives = 291/486 (59%), Gaps = 42/486 (8%)
Query: 104 MYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFV 163
M+S RDPS+RK G+GNIFIKNL ID+KAL+DTFS FG+ILS KIATD +G+SKGFGFV
Sbjct: 1 MWSQRDPSLRKKGSGNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGKSKGFGFV 60
Query: 164 QFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK--FNNVFVKNLDESTT 221
FE + +A+ AID LNGML+N ++++V L ++ER++ +TK + N++VKN++ TT
Sbjct: 61 HFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETT 120
Query: 222 DEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYV 281
DE + +F ++G I SA + +D DGK K FGFVN+EN +DA KAVEALN + + YV
Sbjct: 121 DEQFQDLFIQFGPIVSASLEKDADGKLKGFGFVNYENHEDAVKAVEALNESDLNGEKLYV 180
Query: 282 GKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSC 341
G+AQKK+ER LK Q+E E + K+QG+NL++KNL DS+DDEKL+E F+ +GTITS
Sbjct: 181 GRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKLEEEFTPYGTITSA 240
Query: 342 KVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQF 401
KVMR +G SKG GFV FSTPEEA++A+ E N +++ KPLYVA+AQRK+ RR++L Q
Sbjct: 241 KVMRTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKDVRRSQLAQQI 300
Query: 402 ---SQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPPQMPPRGHAYRYPLGR 458
+QMR + P GQ P + MPPRG + P +
Sbjct: 301 QARNQMRYQQATAAAAAAAAGMP------------GQFMPPMFYGVMPPRGVPFNGPNPQ 348
Query: 459 NM--------QDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALSTALANASPEQ 510
M P G + VP G PR Q ++
Sbjct: 349 QMNPMGGMPKNGMPPQFRNGPVYGVPPQ--GGFPRNANDNNQ-------------FYQQK 393
Query: 511 QRTLLGESLYPLV--EQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLR 568
QR LGE LY V + +AA K+TGM+L++ EV LLE+ E + EA
Sbjct: 394 QRQALGEQLYKKVSAKTSNEEAAGKITGMILDLPPQEVFPLLENDELFEQHYKEASAAYE 453
Query: 569 SVAQQQ 574
S ++Q
Sbjct: 454 SFKKEQ 459
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 101/287 (35%), Positives = 154/287 (53%), Gaps = 19/287 (6%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ +L ++ + LYD FS G +LS ++ D +S G+G+V++ A A+D
Sbjct: 16 NIFIKNLHPDIDNKALYDTFSVFGDILSSKIATD-ENGKSKGFGFVHFEEEGAAKEAIDA 74
Query: 91 LNFTPLNNKSI----RIMYSHRDPSIR--KSGTGNIFIKNLDKSIDHKALHDTFSSFGNI 144
LN LN + I + RD + K+ N+++KN++ + D F FG I
Sbjct: 75 LNGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQDLFIQFGPI 134
Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAI 204
+S + D G+ KGFGFV +EN E A A++ LN +N ++++VG +K ER V
Sbjct: 135 VSASLEKDADGKLKGFGFVNYENHEDAVKAVEALNESDLNGEKLYVGRAQKKNERMHVLK 194
Query: 205 K----------TKFN--NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFG 252
K K+ N+FVKNLD+S DE L++ F YGTITSA VMR +GKSK FG
Sbjct: 195 KQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKLEEEFTPYGTITSAKVMRTENGKSKGFG 254
Query: 253 FVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFE 299
FV F ++A KA+ N + + YV AQ+K R +L Q +
Sbjct: 255 FVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKDVRRSQLAQQIQ 301
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 99/188 (52%), Gaps = 17/188 (9%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
T+LYV +++ TD Q DLF Q G ++S + +D + G+G+VNY N DA +A++
Sbjct: 108 TNLYVKNINSETTDEQFQDLFIQFGPIVSASLEKDADGKLK-GFGFVNYENHEDAVKAVE 166
Query: 90 VLNFTPLNNKSIRI----------------MYSHRDPSIRKSGTGNIFIKNLDKSIDHKA 133
LN + LN + + + ++R + K N+F+KNLD S+D +
Sbjct: 167 ALNESDLNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEK 226
Query: 134 LHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHF 193
L + F+ +G I S K+ +G+SKGFGFV F E A AI + N ++ K ++V
Sbjct: 227 LEEEFTPYGTITSAKVMRTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIA 286
Query: 194 LRKQERET 201
RK R +
Sbjct: 287 QRKDVRRS 294
>gi|348582138|ref|XP_003476833.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Cavia porcellus]
Length = 482
Score = 364 bits (935), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 178/368 (48%), Positives = 256/368 (69%), Gaps = 6/368 (1%)
Query: 26 QFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAA 85
++ SLYVGDL + T+ L+ FS G VLS+R+CRD++TRR LGY YVN+ PADA
Sbjct: 118 KYRLASLYVGDLHADATEDLLFRKFSXAGPVLSIRICRDVATRRPLGYAYVNFLRPADAQ 177
Query: 86 RALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNIL 145
+ALD +NF + K IR+M+S RD +RKSG GN+ IKNLD+S+D+K L++ FS FG IL
Sbjct: 178 KALDTMNFDAVEGKPIRLMWSQRDACLRKSGVGNVIIKNLDRSVDNKTLYEHFSGFGRIL 237
Query: 146 SCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIK 205
S K+ +D G SKG+ FV F+++ +A AI ++NG +I D+QV V F +++RE ++
Sbjct: 238 SSKVMSDDQG-SKGYAFVHFQSQSAADCAIQEMNGKVIRDRQVLVAPFRSRRDRE-AELR 295
Query: 206 TK---FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDA 262
T+ F NV+VKN E DE L+ +F +YG S VM D GKSK FGFV+F++ + A
Sbjct: 296 TRTSEFTNVYVKNFGEDMDDERLQGVFSKYGRTLSVKVMTDSSGKSKGFGFVSFDSHEAA 355
Query: 263 AKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDS 322
KAVE +NGK + + +VG+AQKK ER+ ELK FE+ ++ + QG+ LYIKNL D+
Sbjct: 356 KKAVEEMNGKDINGQLVFVGRAQKKEERQAELKQVFEELKRDGARRCQGVKLYIKNLDDT 415
Query: 323 IDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPL 382
+DD++L+ FS FG+I+ KVM + G KG G V FS+PEEA++A+ +MNG+++ SKPL
Sbjct: 416 VDDDRLRRAFSSFGSISRVKVMEE-EGQRKGFGLVCFSSPEEAAKAMTQMNGRVLGSKPL 474
Query: 383 YVAVAQRK 390
+A+A+R+
Sbjct: 475 NIALAKRQ 482
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 99/288 (34%), Positives = 159/288 (55%), Gaps = 16/288 (5%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATD-GSGQSKGFGFVQFENKESAQNAIDK 177
++++ +L L FS G +LS +I D + + G+ +V F AQ A+D
Sbjct: 123 SLYVGDLHADATEDLLFRKFSXAGPVLSIRICRDVATRRPLGYAYVNFLRPADAQKALDT 182
Query: 178 LNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITS 237
+N + K + L +R+ K+ NV +KNLD S ++ L + F +G I S
Sbjct: 183 MNFDAVEGKPIR----LMWSQRDACLRKSGVGNVIIKNLDRSVDNKTLYEHFSGFGRILS 238
Query: 238 AVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQ 297
+ VM D G SK + FV+F++ A A++ +NGK DR+ V + + +RE EL+ +
Sbjct: 239 SKVMSDDQG-SKGYAFVHFQSQSAADCAIQEMNGKVIRDRQVLVAPFRSRRDREAELRTR 297
Query: 298 FEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFV 357
+ N+Y+KN G+ +DDE+L+ +FS++G S KVM D SG SKG GFV
Sbjct: 298 TSEFT----------NVYVKNFGEDMDDERLQGVFSKYGRTLSVKVMTDSSGKSKGFGFV 347
Query: 358 AFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
+F + E A +A+ EMNGK I + ++V AQ+KEER+A L+ F +++
Sbjct: 348 SFDSHEAAKKAVEEMNGKDINGQLVFVGRAQKKEERQAELKQVFEELK 395
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 106/207 (51%), Gaps = 22/207 (10%)
Query: 201 TVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD-GDGKSKCFGFVNFENA 259
+VA K + +++V +L T++ L + F G + S + RD + + +VNF
Sbjct: 114 SVAAKYRLASLYVGDLHADATEDLLFRKFSXAGPVLSIRICRDVATRRPLGYAYVNFLRP 173
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQK--KSEREQELKGQFEQAMKETVDKFQGLNLYIK 317
DA KA++ +N FD E GK + S+R+ L+ K V N+ IK
Sbjct: 174 ADAQKALDTMN---FDAVE---GKPIRLMWSQRDACLR-------KSGVG-----NVIIK 215
Query: 318 NLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMI 377
NL S+D++ L E FS FG I S KVM D G SKG FV F + A A+ EMNGK+I
Sbjct: 216 NLDRSVDNKTLYEHFSGFGRILSSKVMSDDQG-SKGYAFVHFQSQSAADCAIQEMNGKVI 274
Query: 378 VSKPLYVAVAQRKEERRARLQAQFSQM 404
+ + VA + + +R A L+ + S+
Sbjct: 275 RDRQVLVAPFRSRRDREAELRTRTSEF 301
>gi|402870468|ref|XP_003899242.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Papio anubis]
Length = 496
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 181/365 (49%), Positives = 253/365 (69%), Gaps = 4/365 (1%)
Query: 26 QFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAA 85
++ SLYVGDL +VT+ L+ FS G VLS+R+CRD TRRSLGY YVN+ DA
Sbjct: 132 KYRMASLYVGDLHADVTEDLLFRKFSAAGPVLSIRICRDQVTRRSLGYAYVNFLQLTDAQ 191
Query: 86 RALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNIL 145
+ALD +NF + KSIR+M+S RD +R+SG GN+FIKNLDKSID+K L++ FS FG IL
Sbjct: 192 KALDTMNFDIIKGKSIRLMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSGFGKIL 251
Query: 146 SCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET--VA 203
S K+ +D G SKG+ FV F+N+ +A AI+++NG L+ +VFVG F +++RE +
Sbjct: 252 SSKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGRLLKSCKVFVGRFKNRKDREAELRS 310
Query: 204 IKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAA 263
++F N+++KN DE LK +F +YG S VM D GKSK FGFV+F++ + A
Sbjct: 311 KASEFTNIYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSRGKSKGFGFVSFDSHEAAK 370
Query: 264 KAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSI 323
KAVE +NG+ + + +VG+AQKK ER+ ELK FEQ +E + +QG+ LY+KNL D+I
Sbjct: 371 KAVEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLKRERIRGYQGVKLYVKNLDDTI 430
Query: 324 DDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLY 383
DDEKL+ FS FG+I KVM+ G SKG GF+ FS+ E+A++A+ EMNG+ + SKP+
Sbjct: 431 DDEKLRNEFSSFGSIIRVKVMQ-QEGQSKGFGFICFSSLEDATKAMIEMNGRFLGSKPIS 489
Query: 384 VAVAQ 388
+A+AQ
Sbjct: 490 IALAQ 494
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 101/288 (35%), Positives = 165/288 (57%), Gaps = 16/288 (5%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDK 177
++++ +L + L FS+ G +LS +I D + +S G+ +V F AQ A+D
Sbjct: 137 SLYVGDLHADVTEDLLFRKFSAAGPVLSIRICRDQVTRRSLGYAYVNFLQLTDAQKALDT 196
Query: 178 LNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITS 237
+N +I K + L +R+ ++ NVF+KNLD+S ++ L + F +G I S
Sbjct: 197 MNFDIIKGKSIR----LMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSGFGKILS 252
Query: 238 AVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQ 297
+ VM D G SK + FV+F+N A +A+E +NG+ + +VG+ + + +RE EL+ +
Sbjct: 253 SKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGRLLKSCKVFVGRFKNRKDREAELRSK 311
Query: 298 FEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFV 357
+ N+YIKN G +DDE+LK++FS++G S KVM D G SKG GFV
Sbjct: 312 ASEFT----------NIYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSRGKSKGFGFV 361
Query: 358 AFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
+F + E A +A+ EMNG+ I + ++V AQ+K ER+A L+ F Q++
Sbjct: 362 SFDSHEAAKKAVEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLK 409
>gi|397575959|gb|EJK49989.1| hypothetical protein THAOC_31088, partial [Thalassiosira oceanica]
Length = 690
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 205/446 (45%), Positives = 277/446 (62%), Gaps = 64/446 (14%)
Query: 18 VAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVN 77
V G + N F + SLYVGDL V + LY++F+ VG V S+RVCRD TRRSLGY YVN
Sbjct: 1 VGVGGAPNSFTSASLYVGDLLPEVNEGLLYEIFNAVGPVASIRVCRDAVTRRSLGYAYVN 60
Query: 78 YANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDT 137
Y ADA RALD +NFT + K RIM+S RDPS+R+SG GNIF+KNL + ID+K L+DT
Sbjct: 61 YHQAADAERALDSMNFTDIKGKPCRIMWSQRDPSVRRSGVGNIFVKNLHEGIDNKQLYDT 120
Query: 138 FSSFGNILSCKIATD-GSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRK 196
FS FGNILSCK+ D +G SKG+G+V +E E+A +AIDKL+GMLI+ K+V VG F+R
Sbjct: 121 FSLFGNILSCKVVCDRETGLSKGYGYVHYETNEAAASAIDKLDGMLIDGKEVQVGVFMR- 179
Query: 197 QERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVV---------------- 240
R+T + + N+F+KN+ D+ L+ F E+G I SA V
Sbjct: 180 --RDTRPDQEVYTNLFIKNMPYEWDDKRLEAEFAEFGEIVSASVKMGKRKKFAKKGKKAE 237
Query: 241 -MRDGDGK----------------------------------SKCFGFVNFENADDAAKA 265
+D D K S FGFVNF + AA A
Sbjct: 238 AKKDEDDKEDGAEDKPAEEEKPEEEEAKPAEEEAKPESTEPESLGFGFVNFATHEAAAAA 297
Query: 266 VEALNGKKFD--------DREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIK 317
VEA+N K + ++ +VG+AQKKSER+ EL+ ++E E + KFQG+NLY+K
Sbjct: 298 VEAMNDKVYKVTEDGDEVEKALFVGRAQKKSERQAELRSKYEAEKMERIAKFQGVNLYVK 357
Query: 318 NLGDSIDDEKLKELFSEFGTITSCKVMRDP-SGISKGSGFVAFSTPEEASRALAEMNGKM 376
NL D++ D+ L++ F GTITS K+MRD + S+G GFV FSTPE+A+RA+ EM+GK+
Sbjct: 358 NLDDAVTDDMLRDEFGGMGTITSAKIMRDAKTNNSRGFGFVCFSTPEDATRAVNEMSGKI 417
Query: 377 IVSKPLYVAVAQRKEERRARLQAQFS 402
+ KP+YV++AQR+E RRA+L+AQ +
Sbjct: 418 VAGKPIYVSLAQRREVRRAQLEAQHA 443
>gi|390460450|ref|XP_002745401.2| PREDICTED: polyadenylate-binding protein 4-like [Callithrix
jacchus]
Length = 384
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 186/371 (50%), Positives = 258/371 (69%), Gaps = 6/371 (1%)
Query: 26 QFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAA 85
++ SLYVGDL +VT+ L+ FS VG VLS+R+CRD TR SLGY YVN+ + ADA
Sbjct: 6 KYRMASLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRSSLGYAYVNFLHLADAQ 65
Query: 86 RALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNIL 145
+ALD +NF + KSIR+M+S RD +R+SG GN+FIKNLDKSID+K L++ FS+FG IL
Sbjct: 66 KALDTMNFDIIKGKSIRLMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSAFGKIL 125
Query: 146 SCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIK 205
S K+ +D G SKG+ FV F+N+ +A AI+++NG L+ +VFVG F +++RE ++
Sbjct: 126 SSKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGKLLQGCKVFVGRFKSRKDREA-ELR 183
Query: 206 TK---FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDA 262
+K F NV++KN DE LK +F +YG S VM D GKSK FGFV+F++ + A
Sbjct: 184 SKASEFTNVYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDSHEAA 243
Query: 263 AKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDS 322
KAVE +NG+ + + +V +AQKK ER+ ELK FEQ KE + Q + LY+KNL D+
Sbjct: 244 KKAVEEMNGRDINGQLIFVARAQKKVERQAELKQMFEQLKKERIRGCQVVKLYVKNLDDT 303
Query: 323 IDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPL 382
IDDEKL+ FS FG+I+ KVM++ G SKG G + FS+PE+A +A+ EMNG+++ SKPL
Sbjct: 304 IDDEKLRNEFSSFGSISRVKVMQEE-GQSKGFGLICFSSPEDALKAMTEMNGRILGSKPL 362
Query: 383 YVAVAQRKEER 393
+A+AQ E R
Sbjct: 363 SIALAQCSELR 373
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 104/290 (35%), Positives = 167/290 (57%), Gaps = 16/290 (5%)
Query: 118 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSK-GFGFVQFENKESAQNAID 176
++++ +L + L FS+ G +LS +I D +S G+ +V F + AQ A+D
Sbjct: 10 ASLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRSSLGYAYVNFLHLADAQKALD 69
Query: 177 KLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTIT 236
+N +I K + L +R+ ++ NVF+KNLD+S ++ L + F +G I
Sbjct: 70 TMNFDIIKGKSIR----LMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSAFGKIL 125
Query: 237 SAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKG 296
S+ VM D G SK + FV+F+N A +A+E +NGK + +VG+ + + +RE EL+
Sbjct: 126 SSKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGKLLQGCKVFVGRFKSRKDREAELRS 184
Query: 297 QFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGF 356
+ + N+YIKN G +DDE+LK++FS++G S KVM D SG SKG GF
Sbjct: 185 KASEFT----------NVYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGF 234
Query: 357 VAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRP 406
V+F + E A +A+ EMNG+ I + ++VA AQ+K ER+A L+ F Q++
Sbjct: 235 VSFDSHEAAKKAVEEMNGRDINGQLIFVARAQKKVERQAELKQMFEQLKK 284
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 107/211 (50%), Gaps = 26/211 (12%)
Query: 202 VAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKC-FGFVNFENAD 260
V K + +++V +L T++ L + F G + S + RD +S + +VNF +
Sbjct: 3 VEAKYRMASLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRSSLGYAYVNFLHLA 62
Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKF---QGL-NLYI 316
DA KA++ +N FD +KG+ + M D + G+ N++I
Sbjct: 63 DAQKALDTMN---FDI-----------------IKGKSIRLMWSQRDAYLRRSGIGNVFI 102
Query: 317 KNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKM 376
KNL SID++ L E FS FG I S KVM D G SKG FV F A RA+ EMNGK+
Sbjct: 103 KNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGKL 161
Query: 377 IVSKPLYVAVAQRKEERRARLQAQFSQMRPV 407
+ ++V + +++R A L+++ S+ V
Sbjct: 162 LQGCKVFVGRFKSRKDREAELRSKASEFTNV 192
>gi|389595349|ref|XP_003722897.1| polyadenylate-binding protein 1 [Leishmania major strain Friedlin]
gi|323364125|emb|CBZ13132.1| polyadenylate-binding protein 1 [Leishmania major strain Friedlin]
Length = 560
Score = 363 bits (932), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 216/575 (37%), Positives = 322/575 (56%), Gaps = 45/575 (7%)
Query: 8 HQAQMSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLST 67
HQ QM P +A S+YVGDLD + + QL +LF G +L+VRVCRD+ T
Sbjct: 14 HQPQMDKPMQIA-----------SIYVGDLDATINEPQLVELFKPFGTILNVRVCRDIIT 62
Query: 68 RRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDK 127
+RSLGYGYVN+ N A +A++ +NF + +K +R+M+ RDP++R SG GN+F+KNL+K
Sbjct: 63 QRSLGYGYVNFDNHDSAEKAIESMNFKRVGDKCVRLMWQQRDPALRYSGNGNVFVKNLEK 122
Query: 128 SIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLIN--- 184
+D K+LHD F+ FG+ILSCK+ D G+S+G+GFV F+++ SA++AI K+NG +
Sbjct: 123 DVDSKSLHDIFTKFGSILSCKVMQDEEGKSRGYGFVHFKDETSAKDAIVKMNGAADHASE 182
Query: 185 -DKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD 243
K ++V +F+R+ R A+ F NV++K + + + ++K F ++G ITSA +D
Sbjct: 183 DKKALYVANFIRRNAR-LAALVANFTNVYIKQVLPTVNKDVIEKFFAKFGGITSAAACKD 241
Query: 244 GDGKSKCFGFVNFENADDAAKAVEALNGKKFD-----DREWYVGKAQKKSEREQELKGQF 298
G + F F NFE DDA KAVEA++ D + YV +AQ +SER L+ ++
Sbjct: 242 KSG--RVFAFCNFEKHDDAVKAVEAMHDHHIDGITAPGEKLYVQRAQPRSERLIALRQKY 299
Query: 299 EQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVA 358
Q + G NLY++N L ELF E+G + SC+VM SG+S+G GFV+
Sbjct: 300 MQ------HQALGNNLYVRNFDPEFTGADLLELFKEYGEVKSCRVMVSESGVSRGFGFVS 353
Query: 359 FSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMP 418
FS +EA+ AL EMNG+M+ KPL V +AQR+++R L+ QF Q + M
Sbjct: 354 FSNADEANAALREMNGRMLNGKPLIVNIAQRRDQRYTMLRLQFQQRLQMMM-------RQ 406
Query: 419 MYPPGPSGLGQQFLYGQAPPAIIPPQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVD 478
M+ P P +G Q + +GH P + Q G + P V
Sbjct: 407 MHQPMPF-VGSQGRPMRGRGGRQQLGGRAQGHPMPMPSPQQPQAPAQPQGFAT--PSAVG 463
Query: 479 MGAGIPRR---DASVGQPM-PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKV 534
P+ D P+ PIT L + SP++QR LG+ L+ V ++ + A K+
Sbjct: 464 FVQATPKHSPGDVPETPPLPPIT--PQELESMSPQEQRAALGDRLFLKVYEIAPELAPKI 521
Query: 535 TGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRS 569
TGM LEM E LL + L+ +V EA+ VL++
Sbjct: 522 TGMFLEMKPKEAYELLNDQKRLEERVTEALCVLKA 556
>gi|351695842|gb|EHA98760.1| Polyadenylate-binding protein 1 [Heterocephalus glaber]
Length = 709
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 182/345 (52%), Positives = 240/345 (69%), Gaps = 21/345 (6%)
Query: 84 AARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGN 143
A RALD +NF + K +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FGN
Sbjct: 155 AERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGN 214
Query: 144 ILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV- 202
ILSCK+ D +G SKG+GFV FE +E+A+ AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 215 ILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 273
Query: 203 -AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADD 261
A +F NV++KN E DE LK +FG++G S VM D GKSK FGFV+FE +D
Sbjct: 274 GARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHED 333
Query: 262 AAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGD 321
A KAV+ +NGK+ + ++ YVG+AQKK ER+ ELK +FEQ ++ + ++QG+NLY+KNL D
Sbjct: 334 AQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDD 393
Query: 322 SIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKP 381
IDDE+L++ FS FGTITS K EEA++A+ EMNG+++ +KP
Sbjct: 394 GIDDERLRKEFSPFGTITSAK------------------NSEEATKAVTEMNGRIVATKP 435
Query: 382 LYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSG 426
LYVA+AQRKEER+A L Q+ Q P P P PSG
Sbjct: 436 LYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSG 480
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 105/291 (36%), Positives = 159/291 (54%), Gaps = 40/291 (13%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ +LD ++ + LYD FS G +LS +V D + S GYG+V++ A RA++
Sbjct: 190 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEK 247
Query: 91 LNFTPLNNKSIRI----MYSHRDPSI--RKSGTGNIFIKNLDKSIDHKALHDTFSSFGNI 144
+N LN++ + + R+ + R N++IKN + +D + L D F FG
Sbjct: 248 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPA 307
Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAI 204
LS K+ TD SG+SKGFGFV FE E AQ A+D++NG +N KQ++VG +K ER+T +
Sbjct: 308 LSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQT-EL 366
Query: 205 KTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCF 251
K KF N++VKNLD+ DE L+K F +GTITSA
Sbjct: 367 KRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSA------------- 413
Query: 252 GFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAM 302
+N+++A KAV +NG+ + YV AQ+K ER+ L Q+ Q M
Sbjct: 414 -----KNSEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRM 459
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 94/197 (47%), Gaps = 39/197 (19%)
Query: 21 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYAN 80
GA +F T++Y+ + ++ D +L DLF + G LSV+V D S +S G+G+V++
Sbjct: 274 GARAKEF--TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESG-KSKGFGFVSFER 330
Query: 81 PADAARALDVLNFTPLNNKSIRIMYSHR-----------------DPSIRKSGTGNIFIK 123
DA +A+D +N LN K I + + + D R G N+++K
Sbjct: 331 HEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGV-NLYVK 389
Query: 124 NLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLI 183
NLD ID + L FS FG I S K N E A A+ ++NG ++
Sbjct: 390 NLDDGIDDERLRKEFSPFGTITSAK------------------NSEEATKAVTEMNGRIV 431
Query: 184 NDKQVFVGHFLRKQERE 200
K ++V RK+ER+
Sbjct: 432 ATKPLYVALAQRKEERQ 448
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA+A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 617 PLTA--SMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPE 674
Query: 555 ALKAKVAEAMEVLRSVAQQQA 575
+L++KV EA+ VL++ ++A
Sbjct: 675 SLRSKVDEAVAVLQAHQAKEA 695
>gi|355687608|gb|EHH26192.1| hypothetical protein EGK_16094 [Macaca mulatta]
gi|355749570|gb|EHH53969.1| hypothetical protein EGM_14691 [Macaca fascicularis]
Length = 370
Score = 361 bits (927), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 182/366 (49%), Positives = 253/366 (69%), Gaps = 6/366 (1%)
Query: 26 QFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAA 85
++ SLYVGDL +VT+ L+ FS G VLS+R+CRD TRRSLGY YVN+ DA
Sbjct: 6 KYRMASLYVGDLHADVTEDLLFRKFSAAGPVLSIRICRDQVTRRSLGYAYVNFLQLTDAQ 65
Query: 86 RALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNIL 145
+ALD +NF + KSIR+M+S RD +R+SG GN+FIKNLDKSID+K L++ FS FG IL
Sbjct: 66 KALDTMNFDIIKGKSIRLMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSGFGKIL 125
Query: 146 SCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIK 205
S K+ +D G SKG+ FV F+N+ +A AI+++NG L+ +VFVG F +++RE ++
Sbjct: 126 SSKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGKLLKSCKVFVGRFKNRKDREA-ELR 183
Query: 206 TK---FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDA 262
+K F N+++KN DE LK +F +YG S VM D GKSK FGFV+F++ + A
Sbjct: 184 SKASEFTNIYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDSHEAA 243
Query: 263 AKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDS 322
KAVE +NG+ + + +VG+AQKK ER+ ELK FEQ +E + +QG+ LY+KNL D+
Sbjct: 244 KKAVEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLKRERIRGYQGVKLYVKNLDDT 303
Query: 323 IDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPL 382
IDDEKL+ FS FG+I KVM+ G SKG GF+ FS+ E+A++A+ EMNG + SKP+
Sbjct: 304 IDDEKLRNEFSSFGSIIRVKVMQ-QEGQSKGFGFICFSSLEDATKAMIEMNGCFLGSKPI 362
Query: 383 YVAVAQ 388
+A+AQ
Sbjct: 363 SIALAQ 368
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 166/288 (57%), Gaps = 16/288 (5%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDK 177
++++ +L + L FS+ G +LS +I D + +S G+ +V F AQ A+D
Sbjct: 11 SLYVGDLHADVTEDLLFRKFSAAGPVLSIRICRDQVTRRSLGYAYVNFLQLTDAQKALDT 70
Query: 178 LNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITS 237
+N +I K + L +R+ ++ NVF+KNLD+S ++ L + F +G I S
Sbjct: 71 MNFDIIKGKSIR----LMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSGFGKILS 126
Query: 238 AVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQ 297
+ VM D G SK + FV+F+N A +A+E +NGK + +VG+ + + +RE EL+ +
Sbjct: 127 SKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGKLLKSCKVFVGRFKNRKDREAELRSK 185
Query: 298 FEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFV 357
+ N+YIKN G +DDE+LK++FS++G S KVM D SG SKG GFV
Sbjct: 186 ASEFT----------NIYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFV 235
Query: 358 AFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
+F + E A +A+ EMNG+ I + ++V AQ+K ER+A L+ F Q++
Sbjct: 236 SFDSHEAAKKAVEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLK 283
>gi|313232178|emb|CBY09289.1| unnamed protein product [Oikopleura dioica]
Length = 611
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 195/404 (48%), Positives = 263/404 (65%), Gaps = 25/404 (6%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL T++ LYD FSQ G VLS+RVCRD+ TRRSLGY YVN+ P DA RA+D
Sbjct: 12 SLYVGDLHPEATEAMLYDKFSQAGPVLSIRVCRDMITRRSLGYAYVNFQRPEDAERAIDT 71
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF L+ + S + + R S T K FS+FGNILSCK+
Sbjct: 72 MNFIQLSVNLASAISSSKTWT-RLSTT--------------KCCTIPFSAFGNILSCKVN 116
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER--ETVAIKTKF 208
+ +G+SKG+GFV FE +E+A AI+KL+GML+NDK+VFVG F + ER E +F
Sbjct: 117 VNLAGESKGYGFVHFETEEAAVKAIEKLDGMLMNDKKVFVGRFKSRGERVREYGDRAKQF 176
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NVF+KNL D L ++FGE+G++ S + D +GKS+ FGFV+FE + A K VE
Sbjct: 177 TNVFIKNLPAEWDDAKLTEVFGEHGSVMSVALATDENGKSRQFGFVSFETHECAEKVVEK 236
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
L+ K+F+ ++ +VG+AQKK+ER+ ELK +FE+ E ++QG+NLY+KNL DSI D+ L
Sbjct: 237 LHDKEFEGKKIFVGRAQKKAERQAELKVKFEKLKHERNQRYQGVNLYVKNLDDSITDDIL 296
Query: 329 KELFSEFGTITSCKVMRDPS---GISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVA 385
+E F+ +G ITS KVM D SKG GFV F++ EEA++A+ EMNG++I SKPLYVA
Sbjct: 297 REHFAPYGNITSSKVMTDTDVEGTRSKGFGFVCFTSAEEATKAVTEMNGRIIASKPLYVA 356
Query: 386 VAQRKEERRARLQAQFSQ-----MRPVAMGPSVPPRMPMYPPGP 424
+AQRK+ER+A LQ Q+ Q MR A + P +Y P P
Sbjct: 357 LAQRKDERKAHLQQQYMQRVTTGMRLQAFPTNQPQYGNLYMPPP 400
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 67/119 (56%), Gaps = 15/119 (12%)
Query: 458 RNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQP------MPITALSTALANASPEQQ 511
R Q + G + LP P + A IP A+ QP P+ A T LA A P++Q
Sbjct: 492 RPNQSIIYKPGVRNPLPTPAE--AQIPAEQAA--QPKAPDTEQPLNA--TILAAAPPQEQ 545
Query: 512 RTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLES---PEALKAKVAEAMEVL 567
+ LLGE LYP + QL + K+TGMLLE++ +E+L +L++ P L+ KV EA+ VL
Sbjct: 546 KQLLGERLYPSIRQLYPELCGKITGMLLEIENSELLAMLDTKSNPGLLQEKVQEAVTVL 604
>gi|6019464|gb|AAC64372.2| polyadenylate-binding protein 1 [Leishmania major]
Length = 560
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 216/575 (37%), Positives = 322/575 (56%), Gaps = 45/575 (7%)
Query: 8 HQAQMSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLST 67
HQ QM P +A S+YVGDLD + + QL +LF G +L+VRVCRD+ T
Sbjct: 14 HQPQMDKPIEIA-----------SIYVGDLDATINEPQLVELFKPFGTILNVRVCRDIIT 62
Query: 68 RRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDK 127
+RSLGYGYVN+ N A +A++ +NF + +K +R+M+ RDP++R SG GN+F+KNL+K
Sbjct: 63 QRSLGYGYVNFDNHDSAEKAIESMNFKRVGDKCVRLMWQQRDPALRYSGNGNVFVKNLEK 122
Query: 128 SIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLIN--- 184
+D K+LHD F+ FG+ILSCK+ D G+S+G+GFV F+++ SA++AI K+NG +
Sbjct: 123 DVDSKSLHDIFTKFGSILSCKVMQDEEGKSRGYGFVHFKDETSAKDAIVKMNGAADHASE 182
Query: 185 -DKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD 243
K ++V +F+R+ R A+ F NV++K + + + ++K F ++G ITSA +D
Sbjct: 183 DKKALYVANFIRRNAR-LAALVANFTNVYIKQVLPTVNKDVIEKFFAKFGGITSAAACKD 241
Query: 244 GDGKSKCFGFVNFENADDAAKAVEALNGKKFD-----DREWYVGKAQKKSEREQELKGQF 298
G + F F NFE DDA KAVEA++ D + YV +AQ +SER L+ ++
Sbjct: 242 KSG--RVFAFCNFEKHDDAVKAVEAMHDHHIDGITAPGEKLYVQRAQPRSERLIALRQKY 299
Query: 299 EQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVA 358
Q + G NLY++N L ELF E+G + SC+VM SG+S+G GFV+
Sbjct: 300 MQ------HQALGNNLYVRNFDPEFTGADLLELFKEYGEVKSCRVMVSESGVSRGFGFVS 353
Query: 359 FSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMP 418
FS +EA+ AL EMNG+M+ KPL V +AQR+++R ++ QF Q + M
Sbjct: 354 FSNADEANAALREMNGRMLNGKPLIVNIAQRRDQRYTIVRLQFQQRLQMMM-------RQ 406
Query: 419 MYPPGPSGLGQQFLYGQAPPAIIPPQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVD 478
M+ P P +G Q + +GH P + Q G + P V
Sbjct: 407 MHQPMPF-VGSQGRPMRGRGGRQQLGGRAQGHPMPMPSPQQPQGAAQPQGFAT--PSAVG 463
Query: 479 MGAGIPRR---DASVGQPM-PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKV 534
P+ D P+ PIT L + SP++QR LG+ L+ V ++ D A K+
Sbjct: 464 FVQATPKHSPGDVPETPPLPPIT--PQELESMSPQEQRAALGDRLFLKVYEIPPDVAPKI 521
Query: 535 TGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRS 569
TGM LEM E LL + L+ +V EA+ VL++
Sbjct: 522 TGMFLEMKPKEAYELLNDQKRLEERVTEALCVLKA 556
>gi|389603137|ref|XP_001568596.2| putative polyadenylate-binding protein 1 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|322505742|emb|CAM43715.2| putative polyadenylate-binding protein 1 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 554
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 216/574 (37%), Positives = 318/574 (55%), Gaps = 45/574 (7%)
Query: 6 VQHQAQMSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDL 65
V Q Q+S P +A S+YVGDLD + + QL +LF G +L+VRVCRD+
Sbjct: 12 VAQQPQVSKPMQIA-----------SIYVGDLDAAINEPQLVELFKPFGTILNVRVCRDI 60
Query: 66 STRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNL 125
T+RSLGYGYVN+ N A RA++ +NF + +K +R+M+ RDPS+R SG GN+F+KNL
Sbjct: 61 ITQRSLGYGYVNFDNHHSAERAIESMNFRRVGDKCVRLMWQQRDPSLRYSGNGNVFVKNL 120
Query: 126 DKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLIN- 184
+K +D K+LHD F+ FG+ILSCK+ D G+S+G+GFV F+++ SA++AI K+NG +
Sbjct: 121 EKDVDSKSLHDIFTKFGSILSCKVMEDEEGKSRGYGFVHFKDEISAKDAIVKMNGAADHA 180
Query: 185 ---DKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVM 241
K ++V +F+R+ R A+ F NV++K + + E ++ F ++G ITSA
Sbjct: 181 SEDKKALYVANFIRRNAR-LAALVANFTNVYIKQVLPTVNKEVIENFFAKFGGITSAAAC 239
Query: 242 RDGDGKSKCFGFVNFENADDAAKAVEALNGKKFD-----DREWYVGKAQKKSEREQELKG 296
+D G + F F NFE DDA KAVEA++ D + YV +AQ +SER L+
Sbjct: 240 KDKSG--RVFAFCNFEKHDDAVKAVEAMHDHHIDGITAPGEKLYVQRAQPRSERLIALRQ 297
Query: 297 QFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGF 356
++ Q + G NLY++N L ELF E+G + SC+VM SG S+G GF
Sbjct: 298 KYMQ------HQSLGNNLYVRNFDPEFTGADLLELFKEYGDVKSCRVMMSESGASRGFGF 351
Query: 357 VAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPR 416
V+FS +EA+ AL EMNG+M+ KPL V +AQR+++R L+ QF Q + M P
Sbjct: 352 VSFSNADEANAALREMNGRMLNGKPLIVNIAQRRDQRYTMLRLQFQQRLQMMMRQMHQP- 410
Query: 417 MPMYPPGPSGLGQQFLYGQAPPAIIPPQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVP 476
MP + + Q MP P + Q F G + P
Sbjct: 411 MPFVGGQGRPMRGRGGRQQQGGRAQGHPMP-------MPSPQQSQGFATPSAVGFVQATP 463
Query: 477 VDMGAGIPRRDASVGQPM-PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVT 535
+P P+ PIT L + SP++QR LG+ L+ V ++ + A K+T
Sbjct: 464 KHSPGQVPETP-----PLPPIT--PQELESMSPQEQRAALGDRLFLKVYEIAPELAPKIT 516
Query: 536 GMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRS 569
GM LEM+ E LL + L+ +V EA+ VL++
Sbjct: 517 GMFLEMNPKEAYELLNDQKRLEERVTEALCVLKA 550
>gi|403221305|dbj|BAM39438.1| polyadenylate-binding protein [Theileria orientalis strain
Shintoku]
Length = 656
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 184/377 (48%), Positives = 253/377 (67%), Gaps = 7/377 (1%)
Query: 24 GNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPAD 83
G F + SLYVGDL +VT++ LY++F+ +G V S+RVCRD TR+SLGY YVNY + D
Sbjct: 21 GQVFSSASLYVGDLQPDVTEAVLYEVFNTIGPVASIRVCRDSVTRKSLGYAYVNYYSTQD 80
Query: 84 AARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGN 143
A AL+ LN+ + RIM+S+RDPS+RKSG GNIF+KNLDKSID K+L+DTF+ FG
Sbjct: 81 AEAALENLNYIEIKGHPTRIMWSNRDPSLRKSGAGNIFVKNLDKSIDTKSLYDTFAHFGT 140
Query: 144 ILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVA 203
ILSCK+A D +G S+ +GFV +E++ESA+ AI+K+NGMLI K+V V FLRKQ+RET
Sbjct: 141 ILSCKVAVDSTGASRRYGFVHYESEESAREAIEKVNGMLIGGKKVEVAPFLRKQDRETEE 200
Query: 204 IKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAA 263
+ T N++V+N +E L++ +YG ITS ++ D G+ F FVN++ A A
Sbjct: 201 VYT---NLYVRNFPADWDEEALRQFLEKYGEITSMMLKEDSKGRR--FAFVNYKEASVAK 255
Query: 264 KAVEALNGKKFDDRE--WYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGD 321
+ V LN K ++ V Q K +R+ LK QF DK NLYIKNL D
Sbjct: 256 EVVTTLNDLKLEEASDPLLVCPHQDKVKRQNMLKAQFSTVSPGQDDKRLTSNLYIKNLDD 315
Query: 322 SIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKP 381
+ DD L ELF +FGTITS KVM D + S+G GFV FS P+EA++A+A M+ K++ KP
Sbjct: 316 TFDDASLGELFKQFGTITSSKVMLDANNNSRGFGFVCFSNPQEATKAIAAMHLKLVKGKP 375
Query: 382 LYVAVAQRKEERRARLQ 398
LYV +A+++++R R+Q
Sbjct: 376 LYVGLAEKRDQRLMRMQ 392
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 78/168 (46%), Gaps = 26/168 (15%)
Query: 413 VPPRMPMYPPGPSGLGQQFLYGQAPPAI---------IPPQMPPRGHAYRYPLGRNMQDF 463
VPP M PG G+ + PP + +PP M P R RN
Sbjct: 500 VPPNMAHVVPGAMGVPANMAHHVVPPNMAHVVPGTMGVPPTMVPGAVGMR----RN---- 551
Query: 464 PFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALSTALANASPEQ---QRTLLGESLY 520
+ A S +P PV P+ + + MP+ N + Q+ ++GE L+
Sbjct: 552 --NNNAKSQMP-PVSAFKFTPQ---ARNRDMPVHPQYVVNGNVQVDDVALQKQMIGERLF 605
Query: 521 PLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLR 568
P++ + D A K+TGM+LE+D E+L LL+ + LKAK+ EA+ VL+
Sbjct: 606 PIIARDNPDLAGKITGMMLEIDNQELLQLLDDNDQLKAKIDEAIRVLK 653
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 54/101 (53%), Gaps = 1/101 (0%)
Query: 3 QIQVQHQAQMSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVC 62
Q +V+ Q + + ++ LT++LY+ +LD D+ L +LF Q G + S +V
Sbjct: 279 QDKVKRQNMLKAQFSTVSPGQDDKRLTSNLYIKNLDDTFDDASLGELFKQFGTITSSKVM 338
Query: 63 RDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI 103
D + S G+G+V ++NP +A +A+ ++ + K + +
Sbjct: 339 LD-ANNNSRGFGFVCFSNPQEATKAIAAMHLKLVKGKPLYV 378
>gi|71033649|ref|XP_766466.1| polyadenylate binding protein [Theileria parva strain Muguga]
gi|68353423|gb|EAN34183.1| polyadenylate binding protein, putative [Theileria parva]
Length = 661
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 182/367 (49%), Positives = 249/367 (67%), Gaps = 7/367 (1%)
Query: 27 FLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAAR 86
F + SLYVGDL +VT++ LY++F+ VG V S+RVCRD TR+SLGY YVNY + DA
Sbjct: 24 FSSASLYVGDLKPDVTEAVLYEVFNTVGPVASIRVCRDSVTRKSLGYAYVNYYSTQDAQE 83
Query: 87 ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
AL+ LN+ + RIM+S+RDPS+R+SG GNIF+KNLDKSID K+L+DTFS FG ILS
Sbjct: 84 ALENLNYIEIKGHPTRIMWSNRDPSLRRSGAGNIFVKNLDKSIDTKSLYDTFSHFGPILS 143
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKT 206
CK+A D SG SK +GFV +EN+ESA+ AI+K+NGMLI K+V V FLRKQ+RE+ +
Sbjct: 144 CKVAVDASGASKRYGFVHYENEESAREAIEKVNGMLIGGKRVEVAPFLRKQDRESEEV-- 201
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
F N++V+N +E L++ +YG ITS ++ D G+ F FVN++ + A + V
Sbjct: 202 -FTNLYVRNFPADWDEEALRQFLEKYGEITSMMLKEDSKGRR--FAFVNYKEPEVAKEVV 258
Query: 267 EALNGKKFDDRE--WYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSID 324
LN K ++ V Q K++R+ L+ QF + DK NLYIKNL DS D
Sbjct: 259 NTLNDLKLEESSEPLLVCPHQDKAKRQNLLRAQFNNSTMAQEDKRVTSNLYIKNLDDSFD 318
Query: 325 DEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYV 384
DE L ELF FGTITS KVM D + S+G GFV F+ P+EA++A+A M+ K++ KPLYV
Sbjct: 319 DESLGELFKPFGTITSSKVMLDANNHSRGFGFVCFTNPQEATKAIAAMHLKLVKGKPLYV 378
Query: 385 AVAQRKE 391
+A++++
Sbjct: 379 GLAEKRD 385
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 93/201 (46%), Gaps = 51/201 (25%)
Query: 399 AQFSQMRPVAMGPSVPPRMPMYPP--GPS-----GLGQQFLYGQAPPAIIPPQMPPRGHA 451
A M P++ ++P +P YP PS G ++G P ++PP MP
Sbjct: 478 ANARNMSPMSSA-NIPSNIPHYPSVVPPSMAHVVASGNMGVHGNLPHHVVPPNMP----- 531
Query: 452 YRYPLGRNMQDFPFDMGAGS-MLPVPVDMGAGIPRRDASVGQP----MPITALSTA---- 502
P +MG S M+P GA RRD+S + MP++A
Sbjct: 532 ---------HVLPGNMGVPSNMVP-----GAVGLRRDSSNPKTHQHQMPVSAFKFTPQAR 577
Query: 503 ----------LANASPE-----QQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVL 547
+ N + + Q+ ++GE L+P++ + D A K+TGM+LE+D E+L
Sbjct: 578 NREMPMHPQYVVNGNVQVDDVAMQKQMIGERLFPIIARDNPDLAGKITGMMLEIDNHELL 637
Query: 548 HLLESPEALKAKVAEAMEVLR 568
LLE + LKAK+ EA++VL+
Sbjct: 638 QLLEDNDQLKAKIDEAIKVLK 658
Score = 45.4 bits (106), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A ++ +T++LY+ +LD + D L +LF G + S +V D + S G+G+V + NP
Sbjct: 298 AQEDKRVTSNLYIKNLDDSFDDESLGELFKPFGTITSSKVMLD-ANNHSRGFGFVCFTNP 356
Query: 82 ADAARALDVLNFTPLNNKSIRI 103
+A +A+ ++ + K + +
Sbjct: 357 QEATKAIAAMHLKLVKGKPLYV 378
>gi|84998214|ref|XP_953828.1| polyadenylate (poly(A)) binding protein [Theileria annulata]
gi|65304825|emb|CAI73150.1| polyadenylate (poly(A)) binding protein, putative [Theileria
annulata]
Length = 664
Score = 358 bits (919), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 183/367 (49%), Positives = 248/367 (67%), Gaps = 7/367 (1%)
Query: 27 FLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAAR 86
F + SLYVGDL +VT++ LY++F+ VG V S+RVCRD TR+SLGY YVNY + DA
Sbjct: 24 FSSASLYVGDLKPDVTEAVLYEVFNTVGPVASIRVCRDSVTRKSLGYAYVNYYSTQDAEA 83
Query: 87 ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
AL+ LN+ + RIM+S+RDPS+R+SG GNIF+KNLDKSID K+L+DTFS FG ILS
Sbjct: 84 ALESLNYIEIKGHPTRIMWSNRDPSLRRSGAGNIFVKNLDKSIDTKSLYDTFSHFGPILS 143
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKT 206
CK+A D SG SK +GFV +EN+ESA+ AI+K+NGMLI K+V V FLRKQ+RE +
Sbjct: 144 CKVAVDASGASKRYGFVHYENEESAREAIEKVNGMLIGGKRVEVAPFLRKQDREGEEV-- 201
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
F N++V+N +E L++ +YG ITS ++ D G+ F FVN++ + A + V
Sbjct: 202 -FTNLYVRNFPADWNEEALRQFLEKYGEITSMMLKEDSKGRR--FAFVNYKEPEVAKEVV 258
Query: 267 EALNGKKFDDRE--WYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSID 324
LN K D+ V Q K++R+ L+ QF + DK NLYIKNL DS D
Sbjct: 259 NTLNDLKLDESSEPLLVCPHQDKAKRQNLLRAQFNNSSMGQEDKRVTSNLYIKNLDDSFD 318
Query: 325 DEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYV 384
DE L ELF FGTITS KVM D + S+G GFV F+ P+EA++A+A M+ K++ KPLYV
Sbjct: 319 DESLGELFKPFGTITSSKVMLDANNHSRGFGFVCFTNPQEATKAIAAMHLKLVKGKPLYV 378
Query: 385 AVAQRKE 391
+A++++
Sbjct: 379 GLAEKRD 385
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 43/58 (74%)
Query: 511 QRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLR 568
Q+ ++GE L+P++ + D A K+TGM+LE+D E+L LLE + LKAK+ EA++VL+
Sbjct: 604 QKQMIGERLFPIIARDNPDLAGKITGMMLEIDNHELLQLLEDNDQLKAKIDEAIKVLK 661
>gi|339899318|ref|XP_001469326.2| putative polyadenylate-binding protein 1 [Leishmania infantum
JPCM5]
gi|398023903|ref|XP_003865113.1| polyadenylate-binding protein 1, putative [Leishmania donovani]
gi|321398770|emb|CAM72432.2| putative polyadenylate-binding protein 1 [Leishmania infantum
JPCM5]
gi|322503349|emb|CBZ38434.1| polyadenylate-binding protein 1, putative [Leishmania donovani]
Length = 560
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 217/575 (37%), Positives = 321/575 (55%), Gaps = 45/575 (7%)
Query: 8 HQAQMSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLST 67
HQ QM P +A S+YVGDLD + + QL +LF G +L+VRVCRD+ T
Sbjct: 14 HQPQMDKPMQIA-----------SIYVGDLDAAINEPQLVELFKPFGTILNVRVCRDIIT 62
Query: 68 RRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDK 127
+RSLGYGYVN+ N A +A++ +NF + +K +R+M+ RDP++R SG GN+F+KNL+K
Sbjct: 63 QRSLGYGYVNFDNHDSAEKAIESMNFKRVGDKCVRLMWQQRDPALRYSGNGNVFVKNLEK 122
Query: 128 SIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLIN--- 184
+D K+LHD F+ FG+ILSCK+ D G+S+G+GFV F+++ SA++AI K+NG +
Sbjct: 123 DVDSKSLHDIFTKFGSILSCKVMQDEEGKSRGYGFVHFKDETSAKDAIVKMNGAADHASE 182
Query: 185 -DKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD 243
K ++V +F+R+ R A+ F NV++K + + E ++K F ++G ITSA +D
Sbjct: 183 DKKALYVANFIRRNAR-LAALVANFTNVYIKQVLPTVNKEVIEKFFAKFGGITSAAACKD 241
Query: 244 GDGKSKCFGFVNFENADDAAKAVEALNGKKFD-----DREWYVGKAQKKSEREQELKGQF 298
G + F F NFE DDA KAVEA++ D + YV +AQ +SER L+ ++
Sbjct: 242 KSG--RVFAFCNFEKHDDAVKAVEAMHDHHIDGITAPGEKLYVQRAQPRSERLIALRQKY 299
Query: 299 EQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVA 358
Q + G NLY++N L ELF E+G + SC+VM SG S+G GFV+
Sbjct: 300 MQ------HQSLGNNLYVRNFDPEFTGADLLELFKEYGEVKSCRVMVSESGASRGFGFVS 353
Query: 359 FSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMP 418
FS +EA+ AL EMNG+M+ KPL V +AQR+++R L+ QF Q + M
Sbjct: 354 FSNADEANAALREMNGRMLNGKPLIVNIAQRRDQRYTMLRLQFQQRLQMMM-------RQ 406
Query: 419 MYPPGPSGLGQQFLYGQAPPAIIPPQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVD 478
M+ P P +G Q + +GH P + Q G + P V
Sbjct: 407 MHQPMPF-VGGQGRPMRGRGGRQQLGGRAQGHPMPMPSPQQPQAPAQPQGFAT--PSAVG 463
Query: 479 MGAGIPRR---DASVGQPM-PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKV 534
P+ D P+ PIT L + SP++QR LG+ L+ V ++ + A K+
Sbjct: 464 FVQATPKHSPGDVPETPPLPPIT--PQELESMSPQEQRAALGDRLFLKVYEIAPELAPKI 521
Query: 535 TGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRS 569
TGM LEM E LL + L+ +V EA+ VL++
Sbjct: 522 TGMFLEMKPKEAYELLNDQKRLEERVTEALCVLKA 556
>gi|401430030|ref|XP_003879497.1| putative polyadenylate-binding protein 1 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322495747|emb|CBZ31053.1| putative polyadenylate-binding protein 1 [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 564
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 217/579 (37%), Positives = 321/579 (55%), Gaps = 45/579 (7%)
Query: 6 VQHQAQMSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDL 65
V HQ Q+ P +A S+YVGDLD + + QL +LF G +L+VRVCRD+
Sbjct: 12 VAHQPQVDKPMQIA-----------SIYVGDLDAAINEPQLVELFKPFGTILNVRVCRDI 60
Query: 66 STRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNL 125
T+RSLGYGYVN+ N A +A++ +NF + +K +R+M+ RDP++R SG GN+F+KNL
Sbjct: 61 ITQRSLGYGYVNFDNHESAEKAIESMNFKRVGDKCVRLMWQQRDPALRYSGNGNVFVKNL 120
Query: 126 DKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLIN- 184
+K +D K+LHD F+ FG+ILSCK+ D G+S+G+GFV F+++ SA++AI K+NG +
Sbjct: 121 EKDVDSKSLHDIFTKFGSILSCKVMQDEEGKSRGYGFVHFKDETSAKDAIVKMNGAADHA 180
Query: 185 ---DKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVM 241
K ++V +F+R+ R A+ F NV++K + + + E ++K F ++G ITSA
Sbjct: 181 SEDKKALYVANFIRRNAR-LAALVANFTNVYIKQVLPTVSKEVIEKFFAKFGGITSAAAC 239
Query: 242 RDGDGKSKCFGFVNFENADDAAKAVEALNGKKFD-----DREWYVGKAQKKSEREQELKG 296
+D G + F F NFE DDA KAVEA++ D + YV +AQ +SER L+
Sbjct: 240 KDKSG--RVFAFCNFEKHDDAVKAVEAMHDHHIDGITAPGEKLYVQRAQPRSERLIALRQ 297
Query: 297 QFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGF 356
++ Q + G NLY++N L ELF E+G + SC+VM SG S+G GF
Sbjct: 298 KYMQ------HQSLGNNLYVRNFDPEFTGADLLELFKEYGDVKSCRVMVSESGASRGFGF 351
Query: 357 VAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPR 416
V+FS +EA+ AL EMNG+M+ KPL V +AQR+++R L+ QF Q + M
Sbjct: 352 VSFSNADEANAALREMNGRMLNGKPLIVNIAQRRDQRYTMLRLQFQQRLQMMM------- 404
Query: 417 MPMYPPGPSGLGQQFLYGQAPPAIIPPQMPPRGH--AYRYPLGRNMQDFPFDMGAGSMLP 474
M+ P P +G Q + +GH P G P
Sbjct: 405 RTMHQPMPF-VGGQGRPMRGRGGRQQLGGRAQGHPMPMPSPQQPQAPVQAPVQPQGFATP 463
Query: 475 VPVDMGAGIPRR---DASVGQPM-PITALSTALANASPEQQRTLLGESLYPLVEQLERDA 530
V P+ DA P+ PIT L + SP++QR LG+ L+ V ++ +
Sbjct: 464 SAVGFVQATPKHSPGDAPETPPLPPIT--PQELESMSPQEQRAALGDRLFLKVYEIAPEL 521
Query: 531 AAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRS 569
A K+TGM LEM E LL + L+ +V EA+ VL++
Sbjct: 522 APKITGMFLEMKPKEAYELLNDQKRLEDRVTEALCVLKA 560
>gi|22329932|ref|NP_174676.2| poly(A) binding protein 1 [Arabidopsis thaliana]
gi|332193555|gb|AEE31676.1| poly(A) binding protein 1 [Arabidopsis thaliana]
Length = 407
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 188/390 (48%), Positives = 261/390 (66%), Gaps = 36/390 (9%)
Query: 88 LDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSC 147
++VLN+ L K +RIM+S RDPS R SG GN+F+KNLD+SID+K L D FS+FG +LSC
Sbjct: 1 MEVLNYCKLKGKPMRIMFSERDPSNRMSGRGNVFVKNLDESIDNKQLCDMFSAFGKVLSC 60
Query: 148 KIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK 207
K+A D SG SKG+GFVQF + S A + NG LI ++ + V F+ + + + +
Sbjct: 61 KVARDASGVSKGYGFVQFYSDLSVYTACNFHNGTLIRNQHIHVCPFVSRGQWDKSRV--- 117
Query: 208 FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVE 267
F NV+VKNL E+ TD DLK++FGE+G ITSAVVM+DG+GKS+ FGFVNFE A+ A A+E
Sbjct: 118 FTNVYVKNLVETATDADLKRLFGEFGEITSAVVMKDGEGKSRRFGFVNFEKAEAAVTAIE 177
Query: 268 ALNGKKFDDREWYVGKAQKKSEREQELKGQFE-QAMKETVDKFQGLNLYIKNLGDSIDDE 326
+NG D++E +VG+AQ+K+ R ++LK +FE + + + +G+NLY+KNL DS+D+
Sbjct: 178 KMNGVVVDEKELHVGRAQRKTNRTEDLKAKFELEKIIRDMKTRKGMNLYVKNLDDSVDNT 237
Query: 327 KLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 386
KL+ELFSEFGTITSCKVM +GISKG GFV FST EEAS+A+ +MNGKM+ +KP+YV++
Sbjct: 238 KLEELFSEFGTITSCKVMVHSNGISKGVGFVEFSTSEEASKAMLKMNGKMVGNKPIYVSL 297
Query: 387 AQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQ--APPAIIPPQ 444
AQ KE+ + LQ QF+ PP P QQ ++ Q AP ++ Q
Sbjct: 298 AQCKEQHKLHLQTQFNNP----------------PPSPH---QQPIFSQVVAPATMLSQQ 338
Query: 445 MPPRGHAYRYPLGRNMQDFPFDMGAGSMLP 474
P RG+ ++ P+ M GS +P
Sbjct: 339 TPLRGYNFQ----------PYSM-CGSRMP 357
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 102/283 (36%), Positives = 160/283 (56%), Gaps = 17/283 (6%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
+++V +LD ++ + QL D+FS G+VLS +V RD S S GYG+V + + A +
Sbjct: 32 NVFVKNLDESIDNKQLCDMFSAFGKVLSCKVARDASG-VSKGYGFVQFYSDLSVYTACNF 90
Query: 91 LNFTPLNNKSIRIM-YSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKI 149
N T + N+ I + + R + N+++KNL ++ L F FG I S +
Sbjct: 91 HNGTLIRNQHIHVCPFVSRGQWDKSRVFTNVYVKNLVETATDADLKRLFGEFGEITSAVV 150
Query: 150 ATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFN 209
DG G+S+ FGFV FE E+A AI+K+NG+++++K++ VG RK R T +K KF
Sbjct: 151 MKDGEGKSRRFGFVNFEKAEAAVTAIEKMNGVVVDEKELHVGRAQRKTNR-TEDLKAKFE 209
Query: 210 --------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVN 255
N++VKNLD+S + L+++F E+GTITS VM +G SK GFV
Sbjct: 210 LEKIIRDMKTRKGMNLYVKNLDDSVDNTKLEELFSEFGTITSCKVMVHSNGISKGVGFVE 269
Query: 256 FENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQF 298
F +++A+KA+ +NGK ++ YV AQ K + + L+ QF
Sbjct: 270 FSTSEEASKAMLKMNGKMVGNKPIYVSLAQCKEQHKLHLQTQF 312
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 110/210 (52%), Gaps = 19/210 (9%)
Query: 18 VAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVN 77
V+ G + T++YV +L TD+ L LF + G++ S V +D +S +G+VN
Sbjct: 107 VSRGQWDKSRVFTNVYVKNLVETATDADLKRLFGEFGEITSAVVMKD-GEGKSRRFGFVN 165
Query: 78 YANPADAARALDVLNFTPLNNKSIRIMYSHRDPS--------------IRKSGTG---NI 120
+ A A++ +N ++ K + + + R + IR T N+
Sbjct: 166 FEKAEAAVTAIEKMNGVVVDEKELHVGRAQRKTNRTEDLKAKFELEKIIRDMKTRKGMNL 225
Query: 121 FIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNG 180
++KNLD S+D+ L + FS FG I SCK+ +G SKG GFV+F E A A+ K+NG
Sbjct: 226 YVKNLDDSVDNTKLEELFSEFGTITSCKVMVHSNGISKGVGFVEFSTSEEASKAMLKMNG 285
Query: 181 MLINDKQVFVGHFLRKQERETVAIKTKFNN 210
++ +K ++V + +E+ + ++T+FNN
Sbjct: 286 KMVGNKPIYVS-LAQCKEQHKLHLQTQFNN 314
>gi|255549774|ref|XP_002515938.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223544843|gb|EEF46358.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 608
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 186/397 (46%), Positives = 262/397 (65%), Gaps = 8/397 (2%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDLD VT+ L +FS +G + +V +CR T RSL YGYVN+ P DA +AL
Sbjct: 20 SLYVGDLDPEVTEMNLRTVFSSMGPIRNVHLCRCSLTGRSLCYGYVNFYRPYDAYKALSN 79
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
LN T L K +RIM+ R+P RKSG GN+++KNLD SID L FS FG ILSCK+
Sbjct: 80 LNHTYLKGKLMRIMWCQRNPCARKSGIGNLYVKNLDASIDSAGLQSLFSKFGTILSCKVV 139
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAI--KTKF 208
+ G+SKG+GFVQF++++SA A L+ ++ +K+++V F++K ER T + KF
Sbjct: 140 EE-HGKSKGYGFVQFDSEDSALAARTALHDTMLKEKKLYVSRFVKKSERTTATSYDELKF 198
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
N++VKNL + T + +F +G I SAV+M+D +GKS+ FGFV+FE+ +DA KAV+A
Sbjct: 199 TNLYVKNLSKDMTQDAFHNMFSAFGEIISAVIMQDHNGKSRGFGFVDFESPEDAKKAVDA 258
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
LNG + + R +VG+AQ K+ER++ L+ +++ ++KF+ NLY+KNL ID++KL
Sbjct: 259 LNGYQLESRTLFVGRAQAKAERKKILQHEYKDIFNTHMEKFKASNLYVKNLALCIDNDKL 318
Query: 329 KELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
+ELFS G I S KVMR +G S+G GFV FS+PEEA +AL +NG + K LYVA+AQ
Sbjct: 319 QELFSCSGKIVSAKVMRYDNGASRGFGFVCFSSPEEAKKALNALNGAVFQGKSLYVAMAQ 378
Query: 389 RKEERRARLQAQFS--QMRPVAMGPSV---PPRMPMY 420
K +R+ LQ FS Q +P + S PP P+Y
Sbjct: 379 CKRDRQLALQTYFSVPQSQPPYLSDSSVVPPPISPVY 415
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 111/196 (56%), Gaps = 18/196 (9%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
T+LYV +L ++T +++FS G+++S + +D +S G+G+V++ +P DA +A+D
Sbjct: 199 TNLYVKNLSKDMTQDAFHNMFSAFGEIISAVIMQD-HNGKSRGFGFVDFESPEDAKKAVD 257
Query: 90 VLNFTPLNNKSIRI-------------MYSHRD---PSIRKSGTGNIFIKNLDKSIDHKA 133
LN L ++++ + + ++D + K N+++KNL ID+
Sbjct: 258 ALNGYQLESRTLFVGRAQAKAERKKILQHEYKDIFNTHMEKFKASNLYVKNLALCIDNDK 317
Query: 134 LHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHF 193
L + FS G I+S K+ +G S+GFGFV F + E A+ A++ LNG + K ++V
Sbjct: 318 LQELFSCSGKIVSAKVMRYDNGASRGFGFVCFSSPEEAKKALNALNGAVFQGKSLYVAMA 377
Query: 194 LRKQERETVAIKTKFN 209
K++R+ +A++T F+
Sbjct: 378 QCKRDRQ-LALQTYFS 392
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 26 QFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAA 85
+F ++LYV +L + + +L +LFS G+++S +V R S G+G+V +++P +A
Sbjct: 298 KFKASNLYVKNLALCIDNDKLQELFSCSGKIVSAKVMR-YDNGASRGFGFVCFSSPEEAK 356
Query: 86 RALDVLNFTPLNNKSIRI 103
+AL+ LN KS+ +
Sbjct: 357 KALNALNGAVFQGKSLYV 374
>gi|294940190|ref|XP_002782709.1| polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
gi|239894589|gb|EER14504.1| polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
Length = 716
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 186/419 (44%), Positives = 263/419 (62%), Gaps = 51/419 (12%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLY GDL +VT++ LY++F+ +G V S+RVCRD TR+SLGY Y+N+ N ADA RALD
Sbjct: 49 SLYAGDLAPDVTEAVLYEVFNAIGPVASIRVCRDSVTRKSLGYAYINFHNVADAERALDT 108
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
LN++P+ + R+M+SHRDP++R+SG GN+++KNLD++ID+KAL+DTFS FGNILSCK+A
Sbjct: 109 LNYSPIKGRPCRLMWSHRDPALRRSGAGNVYVKNLDRNIDNKALYDTFSLFGNILSCKVA 168
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNN 210
G+S+GFGFV FE+ ESA+ AI KLNGM I +K V+V F + ER K F N
Sbjct: 169 LTPDGKSRGFGFVHFESDESAEAAIAKLNGMQIGEKTVYVAPFKKTAERNDGTPKN-FTN 227
Query: 211 VFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALN 270
V++K++ S +E +K+ FG +G ITS V D G+ F FVN+ + A AVE ++
Sbjct: 228 VYIKHIPASWNEEKIKEEFGAFGEITSLAVQTDPKGRR--FAFVNYAEFEQARAAVEEMD 285
Query: 271 GKKFDDRE-----------------------------------------------WYVGK 283
GK + E YV +
Sbjct: 286 GKDVRNEEEKAADRAQREREREERKAAREAAKAEGREDGDDVESDDDDEEPETSHLYVAR 345
Query: 284 AQKKSEREQELKGQFEQA-MKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCK 342
AQ K+ER LK QF + + +F G+NLY+KNLG+ +DD +LK++F FGT+TS K
Sbjct: 346 AQPKAERAAVLKEQFSASRGAQGGGRFGGVNLYVKNLGEDVDDAELKKMFEPFGTVTSVK 405
Query: 343 VMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQF 401
VM D G+S+G GFV FST EEA++A+ +M+ K+I KPLYV + +++E+R RLQ ++
Sbjct: 406 VMVDDKGVSRGFGFVCFSTHEEATKAVTDMHLKLIGGKPLYVGMHEKREQRLERLQQRY 464
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 93/188 (49%), Gaps = 17/188 (9%)
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENADDAAKA 265
+F +++ +L T+ L ++F G + S V RD KS + ++NF N DA +A
Sbjct: 46 QFASLYAGDLAPDVTEAVLYEVFNAIGPVASIRVCRDSVTRKSLGYAYINFHNVADAERA 105
Query: 266 VEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDD 325
++ LN R + + + + G N+Y+KNL +ID+
Sbjct: 106 LDTLNYSPIKGRPCRLMWSHRDPALRRSGAG----------------NVYVKNLDRNIDN 149
Query: 326 EKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVA 385
+ L + FS FG I SCKV P G S+G GFV F + E A A+A++NG I K +YVA
Sbjct: 150 KALYDTFSLFGNILSCKVALTPDGKSRGFGFVHFESDESAEAAIAKLNGMQIGEKTVYVA 209
Query: 386 VAQRKEER 393
++ ER
Sbjct: 210 PFKKTAER 217
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 43/59 (72%)
Query: 511 QRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRS 569
Q+ +LGE LY +++++ A K+TGM+LEMD +E+L LLES L+AKV EA+ VL S
Sbjct: 657 QKQMLGEQLYTQIQRIQPQLAGKITGMMLEMDNSELLILLESESQLRAKVDEALMVLHS 715
>gi|294889687|ref|XP_002772922.1| polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
gi|239877502|gb|EER04738.1| polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
Length = 715
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 186/419 (44%), Positives = 263/419 (62%), Gaps = 51/419 (12%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLY GDL +VT++ LY++F+ +G V S+RVCRD TR+SLGY Y+N+ N ADA RALD
Sbjct: 49 SLYAGDLAPDVTEAVLYEVFNAIGPVASIRVCRDSVTRKSLGYAYINFHNVADAERALDT 108
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
LN++P+ + R+M+SHRDP++R+SG GN+++KNLD++ID+KAL+DTFS FGNILSCK+A
Sbjct: 109 LNYSPIKGRPCRLMWSHRDPALRRSGAGNVYVKNLDRNIDNKALYDTFSLFGNILSCKVA 168
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNN 210
G+S+GFGFV FE+ ESA+ AI KLNGM I +K V+V F + ER K F N
Sbjct: 169 LTPDGKSRGFGFVHFESDESAEAAIAKLNGMQIGEKTVYVAPFKKTAERNDGTPKN-FTN 227
Query: 211 VFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALN 270
V++K++ S +E +K+ FG +G ITS V D G+ F FVN+ + A AVE ++
Sbjct: 228 VYIKHIPASWNEEKIKEEFGAFGEITSLAVQTDPKGRR--FAFVNYAEFEQARAAVEEMD 285
Query: 271 GKKFDDRE-----------------------------------------------WYVGK 283
GK + E YV +
Sbjct: 286 GKDVRNEEEKAADRAQREREREERKAAREAAKAEGREEGDDVESDDDDEEPETSHLYVAR 345
Query: 284 AQKKSEREQELKGQFEQA-MKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCK 342
AQ K+ER LK QF + + +F G+NLY+KNLG+ +DD +LK++F FGT+TS K
Sbjct: 346 AQPKAERAAVLKEQFSASRGAQGGGRFGGVNLYVKNLGEDVDDAELKKMFEPFGTVTSVK 405
Query: 343 VMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQF 401
VM D G+S+G GFV FST EEA++A+ +M+ K+I KPLYV + +++E+R RLQ ++
Sbjct: 406 VMVDDKGVSRGFGFVCFSTHEEATKAVTDMHLKLIGGKPLYVGMHEKREQRLERLQQRY 464
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 93/188 (49%), Gaps = 17/188 (9%)
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENADDAAKA 265
+F +++ +L T+ L ++F G + S V RD KS + ++NF N DA +A
Sbjct: 46 QFASLYAGDLAPDVTEAVLYEVFNAIGPVASIRVCRDSVTRKSLGYAYINFHNVADAERA 105
Query: 266 VEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDD 325
++ LN R + + + + G N+Y+KNL +ID+
Sbjct: 106 LDTLNYSPIKGRPCRLMWSHRDPALRRSGAG----------------NVYVKNLDRNIDN 149
Query: 326 EKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVA 385
+ L + FS FG I SCKV P G S+G GFV F + E A A+A++NG I K +YVA
Sbjct: 150 KALYDTFSLFGNILSCKVALTPDGKSRGFGFVHFESDESAEAAIAKLNGMQIGEKTVYVA 209
Query: 386 VAQRKEER 393
++ ER
Sbjct: 210 PFKKTAER 217
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 43/59 (72%)
Query: 511 QRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRS 569
Q+ +LGE LY +++++ A K+TGM+LEMD +E+L LLES L+AKV EA+ VL S
Sbjct: 656 QKQMLGEQLYTQIQRIQPQLAGKITGMMLEMDNSELLILLESESQLRAKVDEALMVLHS 714
>gi|209881749|ref|XP_002142312.1| polyadenylate-binding protein [Cryptosporidium muris RN66]
gi|209557918|gb|EEA07963.1| polyadenylate-binding protein, putative [Cryptosporidium muris
RN66]
Length = 723
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 193/456 (42%), Positives = 275/456 (60%), Gaps = 77/456 (16%)
Query: 28 LTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARA 87
++ SLYVGDLD +VT++ LY++F+ V V SVR+CRD TRRSLGY YVNY + ADA RA
Sbjct: 10 VSASLYVGDLDPDVTETMLYEIFNSVAVVSSVRICRDALTRRSLGYAYVNYNSVADAERA 69
Query: 88 LDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSC 147
LD LNFT + ++ RIM+ RDP+ R++ GN+F+KNLDKSID+K L DTFS FGNI+SC
Sbjct: 70 LDTLNFTCIRSRPCRIMWCLRDPASRRNNEGNVFVKNLDKSIDNKTLFDTFSLFGNIMSC 129
Query: 148 KIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK 207
KIATD G S G+GF+ FE+ ESA+ AI +LNGM++ D+ ++VG F RK ER + KT
Sbjct: 130 KIATDSEGNSLGYGFIHFEHPESAKEAIARLNGMILGDRPIYVGKFQRKAERFSEKDKT- 188
Query: 208 FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCF-----------GFVNF 256
F NV+VK++ ++ ++E L +FG YG I+S V+ D G+ F N
Sbjct: 189 FTNVYVKHIPKTWSEETLHTLFGVYGKISSLVLQSDSKGRPFGFVNFEDPESAKKAVANL 248
Query: 257 ENA---------------------DDAA-----------KAVEALNGKKFDDRE------ 278
NA DD + VE+ + K+ +D+E
Sbjct: 249 HNALVTPLGVELNSNNSERTESGKDDGLSSISSNTESSDETVESNDYKQRNDKEDPQEAD 308
Query: 279 -------------------WYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
YV +AQK++ER+ LK Q E A +E+ +++QG+NLY+KNL
Sbjct: 309 VEKNSDEENSVPFDVQPNRLYVSRAQKRNERQVVLKSQHE-AARESQNRYQGVNLYVKNL 367
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
+S+ + L+ LF +GTI+S + D SGIS+G GFV+F +P+EA++A+ EM+ K++
Sbjct: 368 SESMTESDLRSLFEPYGTISSVSIKTDESGISRGFGFVSFLSPDEATKAITEMHLKLVRG 427
Query: 380 KPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPP 415
KPLYV + +RKE+R RLQ + G +VPP
Sbjct: 428 KPLYVGLHERKEQRALRLQQRIR-------GGTVPP 456
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 72/133 (54%), Gaps = 19/133 (14%)
Query: 446 PPRGH-------AYRYPLGRNMQDFP-FDMGAGSML---PVPVDMGAGIPRRDASVGQPM 494
P GH ++++P D P DM G ++ P + IP+ D +
Sbjct: 595 PTHGHQVQIPKQSFKFPSHIKTSDQPRVDMIPGGLVNMDPSGISSVPMIPQSD------I 648
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA ASP Q+ LLGE L+P++ Q + + A K+TGM+LEMD E+L +L S
Sbjct: 649 PLTA--STLATASPSMQKQLLGERLFPIIAQYQPELAGKITGMMLEMDNNELLEILNSDA 706
Query: 555 ALKAKVAEAMEVL 567
+K KV EAM VL
Sbjct: 707 EIKNKVDEAMIVL 719
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 19 AAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNY 78
AA S N++ +LYV +L ++T+S L LF G + SV + D S S G+G+V++
Sbjct: 349 AARESQNRYQGVNLYVKNLSESMTESDLRSLFEPYGTISSVSIKTDESG-ISRGFGFVSF 407
Query: 79 ANPADAARALDVLNFTPLNNKSIRIMYSHR 108
+P +A +A+ ++ + K + + R
Sbjct: 408 LSPDEATKAITEMHLKLVRGKPLYVGLHER 437
>gi|71993209|ref|NP_001021710.1| Protein PAB-1, isoform b [Caenorhabditis elegans]
gi|38422742|emb|CAE54916.1| Protein PAB-1, isoform b [Caenorhabditis elegans]
Length = 583
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 184/348 (52%), Positives = 244/348 (70%), Gaps = 7/348 (2%)
Query: 86 RALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNIL 145
RA+D +NF L+ K +RIM+S RDP++R+SG GNIFIKNLDK ID+K+++DTFS FGNIL
Sbjct: 25 RAMDTMNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNIL 84
Query: 146 SCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHF--LRKQERETVA 203
SCK+A D G SKG+GFV FE +E+AQNAI K+NGML+ K+VFVG F ++ RE
Sbjct: 85 SCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFVGKFQPRAQRNRELGE 144
Query: 204 IKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAA 263
+F NV+VKN + E L+K+F ++G ITS VM +GKSK FGFV F N ++A
Sbjct: 145 TAKQFTNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTV-EGKSKGFGFVAFANPEEAE 203
Query: 264 KAVEALNGKKFD--DREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGD 321
AV+AL+ + D + +V +AQKKSER ELK + EQ E + K+QG+NLY+KNL +
Sbjct: 204 TAVQALHDSTIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDE 263
Query: 322 SIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKP 381
++DD+ LK+ F +G ITS KVM D +G SKG GFV F PEEA+ A+ EMN KM+ SKP
Sbjct: 264 TVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKP 323
Query: 382 LYVAVAQRKEERRARLQAQFSQ-MRPVAMGPSVPPRMPMYPPGPSGLG 428
LYVA+AQRKE+RRA+L +Q+ Q + + M +VP MY P G G
Sbjct: 324 LYVAIAQRKEDRRAQLASQYMQRLASMRMHGNVPG-AAMYNPTQPGPG 370
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/293 (34%), Positives = 152/293 (51%), Gaps = 24/293 (8%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ +LD + + +YD FS G +LS +V D S GYG+V++ A A+
Sbjct: 58 NIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAID-EDGFSKGYGFVHFETEEAAQNAIQK 116
Query: 91 LNFTPLNNKSIRI-MYSHRDPSIRKSGT-----GNIFIKNLDKSIDHKALHDTFSSFGNI 144
+N L K + + + R R+ G N+++KN + + L F+ FGNI
Sbjct: 117 VNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKLFAKFGNI 176
Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLI--NDKQVFVGHFLRKQERETV 202
SC++ T G+SKGFGFV F N E A+ A+ L+ I D ++ V +K ER
Sbjct: 177 TSCEVMTV-EGKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQKKSERH-A 234
Query: 203 AIKTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSK 249
+K K N++VKNLDE+ D+ LKK F YG ITSA VM D +G+SK
Sbjct: 235 ELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSK 294
Query: 250 CFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAM 302
FGFV FE ++A AV +N K + YV AQ+K +R +L Q+ Q +
Sbjct: 295 GFGFVCFEKPEEATSAVTEMNSKMVCSKPLYVAIAQRKEDRRAQLASQYMQRL 347
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 58/87 (66%), Gaps = 6/87 (6%)
Query: 490 VGQPMPITALSTALANASPEQQRTLLGESLYPLVEQL---ERDAAAKVTGMLLEMDQTEV 546
+G P+T S LA A+P++Q+ LLGE +Y L+E+L +DA K+TGM+LE+D +E+
Sbjct: 500 IGGQEPLT--SAMLAAAAPQEQKQLLGERIYALIEKLYPGHKDAG-KITGMMLEIDNSEL 556
Query: 547 LHLLESPEALKAKVAEAMEVLRSVAQQ 573
+ +L+ E ++KV EA VL S +Q
Sbjct: 557 IMMLQDSELFRSKVDEAASVLVSAQKQ 583
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Query: 26 QFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAA 85
++ +LYV +LD V D L F G + S +V D RS G+G+V + P +A
Sbjct: 250 KYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFEKPEEAT 308
Query: 86 RALDVLNFTPLNNKSIRIMYSHRDPSIR 113
A+ +N + +K + + + R R
Sbjct: 309 SAVTEMNSKMVCSKPLYVAIAQRKEDRR 336
>gi|7673357|gb|AAF66824.1|AF190656_1 poly(A)-binding protein [Nicotiana tabacum]
Length = 330
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 199/332 (59%), Positives = 225/332 (67%), Gaps = 63/332 (18%)
Query: 323 IDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPL 382
I DEKLKELFS +GTITSCKVMRDPSG+SKGSGFVAFS PEEASRAL+EMNGKM+VSKPL
Sbjct: 1 ISDEKLKELFSPYGTITSCKVMRDPSGVSKGSGFVAFSNPEEASRALSEMNGKMVVSKPL 60
Query: 383 YVAVAQRKEERRARLQAQFSQMRPVAMG-------PSVPPRMP--------------MYP 421
YVA+AQRKEERRARLQAQFSQMRP+AM P PP P M P
Sbjct: 61 YVALAQRKEERRARLQAQFSQMRPIAMASSVAPRMPMYPPGGPGLGQQIFYGQPQPAMLP 120
Query: 422 PGPSGLGQQ----------------------------------------FLYGQAPPAII 441
P +G G Q GQ P ++
Sbjct: 121 PQ-AGFGYQQQLVPGMRPGGGPMPNFFMPMVQQGQQGQRPGSRRGGAVPLQQGQQPVPLM 179
Query: 442 PPQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALST 501
QM PRG YRYP GR + D F G M +P DMG G+P RDA + QP+P+ AL+T
Sbjct: 180 QQQMFPRGRGYRYPPGRGLPDVAFPGVGGGMFSIPYDMG-GMPVRDAGIVQPIPVGALAT 238
Query: 502 ALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVA 561
ALAN+SP +QRT+LGE+LYPLVEQLE + AAKVTGMLLEMDQTEVLHLLESPEALKAKVA
Sbjct: 239 ALANSSPTEQRTMLGENLYPLVEQLEPETAAKVTGMLLEMDQTEVLHLLESPEALKAKVA 298
Query: 562 EAMEVLRSVAQQQANNPADQLASLSLNENLVS 593
EAMEVLR+V+QQQ++NPADQLASLSLN+ LVS
Sbjct: 299 EAMEVLRNVSQQQSSNPADQLASLSLNDGLVS 330
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 51/80 (63%)
Query: 221 TDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWY 280
+DE LK++F YGTITS VMRD G SK GFV F N ++A++A+ +NGK + Y
Sbjct: 2 SDEKLKELFSPYGTITSCKVMRDPSGVSKGSGFVAFSNPEEASRALSEMNGKMVVSKPLY 61
Query: 281 VGKAQKKSEREQELKGQFEQ 300
V AQ+K ER L+ QF Q
Sbjct: 62 VALAQRKEERRARLQAQFSQ 81
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 43/71 (60%)
Query: 129 IDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQV 188
I + L + FS +G I SCK+ D SG SKG GFV F N E A A+ ++NG ++ K +
Sbjct: 1 ISDEKLKELFSPYGTITSCKVMRDPSGVSKGSGFVAFSNPEEASRALSEMNGKMVVSKPL 60
Query: 189 FVGHFLRKQER 199
+V RK+ER
Sbjct: 61 YVALAQRKEER 71
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 41 VTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKS 100
++D +L +LFS G + S +V RD S S G G+V ++NP +A+RAL +N + +K
Sbjct: 1 ISDEKLKELFSPYGTITSCKVMRDPSGV-SKGSGFVAFSNPEEASRALSEMNGKMVVSKP 59
Query: 101 IRIMYSHR 108
+ + + R
Sbjct: 60 LYVALAQR 67
>gi|405970795|gb|EKC35670.1| Polyadenylate-binding protein 1 [Crassostrea gigas]
Length = 462
Score = 351 bits (901), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 183/317 (57%), Positives = 238/317 (75%), Gaps = 4/317 (1%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
+G + SLYVGDL +VT++ L++ FS G VL +RVCRD+ TRRSLGY YVN+ PA
Sbjct: 9 AGPSYPMASLYVGDLHPDVTEAMLFEKFSTAGPVLPIRVCRDMITRRSLGYAYVNFQQPA 68
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
DA RALD +NF + + IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+FG
Sbjct: 69 DAERALDTMNFDTIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFG 128
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER-ET 201
NILSCKI D G S+G+GFV FE +E+A+ AI+K+NGML+N K+VFVG F+ ++ER E
Sbjct: 129 NILSCKIVCDEHG-SRGYGFVHFETEEAARIAIEKVNGMLLNGKKVFVGRFMSRRERLEV 187
Query: 202 VAIKT-KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMR-DGDGKSKCFGFVNFENA 259
+ K KFNNV+VKN E DE L+ +F YG I SA VM DG GK K FGFV+FE+
Sbjct: 188 LGDKMRKFNNVYVKNFSEEINDETLRDMFEPYGKIISAKVMTDDGSGKGKGFGFVSFEDP 247
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
+ A KAVEALNG + YVG+AQKK ER+ ELK +FE+ E ++++QG+NLY+KNL
Sbjct: 248 EAAEKAVEALNGNDNSGKILYVGRAQKKIERQAELKEKFERIRMERINRYQGVNLYVKNL 307
Query: 320 GDSIDDEKLKELFSEFG 336
D+IDDE+L++ F++FG
Sbjct: 308 DDNIDDERLRKEFAQFG 324
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 93/289 (32%), Positives = 159/289 (55%), Gaps = 17/289 (5%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDK 177
++++ +L + L + FS+ G +L ++ D + +S G+ +V F+ A+ A+D
Sbjct: 17 SLYVGDLHPDVTEAMLFEKFSTAGPVLPIRVCRDMITRRSLGYAYVNFQQPADAERALDT 76
Query: 178 LNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITS 237
+N I + + + +R+ K+ NVF+KNLD+S ++ L F +G I S
Sbjct: 77 MNFDTIKGRPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 132
Query: 238 AVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQ 297
++ D G S+ +GFV+FE + A A+E +NG + ++ +VG+ + ER +
Sbjct: 133 CKIVCDEHG-SRGYGFVHFETEEAARIAIEKVNGMLLNGKKVFVGRFMSRRERLE----- 186
Query: 298 FEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRD-PSGISKGSGF 356
+ + + KF N+Y+KN + I+DE L+++F +G I S KVM D SG KG GF
Sbjct: 187 ---VLGDKMRKFN--NVYVKNFSEEINDETLRDMFEPYGKIISAKVMTDDGSGKGKGFGF 241
Query: 357 VAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
V+F PE A +A+ +NG K LYV AQ+K ER+A L+ +F ++R
Sbjct: 242 VSFEDPEAAEKAVEALNGNDNSGKILYVGRAQKKIERQAELKEKFERIR 290
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 35/41 (85%)
Query: 529 DAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRS 569
D A K+TGMLLE+D +E+LH+LES E+L+AKV EA+ VL++
Sbjct: 408 DLAGKITGMLLEIDNSELLHMLESQESLEAKVKEAVAVLQA 448
>gi|342183460|emb|CCC92940.1| putative polyadenylate-binding protein 1 [Trypanosoma congolense
IL3000]
Length = 552
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 213/573 (37%), Positives = 317/573 (55%), Gaps = 73/573 (12%)
Query: 26 QFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAA 85
Q SLYVGDLD +++ QL ++F G +L+VRVCRD+ T+RSLGYGYVNY N A
Sbjct: 17 QLQVASLYVGDLDPAISEPQLVEIFRPYGTILNVRVCRDIITQRSLGYGYVNYDNANSAT 76
Query: 86 RALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNIL 145
+A++ +NF + K IRIM+ RDP++R SG GN+F+KNL +D + L F FG IL
Sbjct: 77 KAMEEMNFKRVGEKCIRIMWQQRDPALRYSGNGNVFVKNLKGEVDSRELSLIFKKFGEIL 136
Query: 146 SCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGM--LINDKQ--VFVGHFLRKQERET 201
SCK+ D SG S+G+GFV F++ +A++AI+ +NG+ ++K+ ++V +F+R+ R
Sbjct: 137 SCKVMDDESGNSRGYGFVHFKDDNAAKSAIESMNGVTEYADEKKTALYVANFIRRNAR-L 195
Query: 202 VAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADD 261
A+ F NV++K + + ++K F ++G ITSA + +D +G++ F F NFE DD
Sbjct: 196 AALVANFTNVYIKQILPTVDKAIIEKFFSKFGGITSAAICKDKNGRA--FAFCNFEKHDD 253
Query: 262 AAKAVEALNGKKFD-----DREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYI 316
A KA+E + + + + YV +AQ +SER L+ ++ Q G NLY+
Sbjct: 254 AVKAIEEFHDHEVEGVTQPGEKLYVQRAQPRSERLIALRQKYMQCQS------LGNNLYV 307
Query: 317 KNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKM 376
+N ++ L ELF E+G I SC+VM D +G+S+G GFV+F ++A+ AL EM+G+M
Sbjct: 308 RNFDPEFTEKDLNELFKEYGVIRSCRVMTDANGVSRGFGFVSFENADQANAALREMSGRM 367
Query: 377 IVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQA 436
+ KPL V +AQR+++R F+ +R ++PP P G+
Sbjct: 368 LNGKPLVVNIAQRRDQR-------FTMLRLQLQQRLQMMMRQIHPP-PFGM--------- 410
Query: 437 PPAIIPPQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDA----SVG- 491
P QMP R ++P G + M +PV M IPR D S+G
Sbjct: 411 -----PRQMPQRRRGRQHPRGHD-----------QMPSLPV-MPPVIPRNDMFNTPSMGV 453
Query: 492 -------QPMPITALSTA---------LANASPEQQRTLLGESLYPLVEQLERDAAAKVT 535
Q P TA T L N + E+QR LG+ LY V +L D A K+T
Sbjct: 454 SAAPRTPQASPATAPDTPPLPPITAEDLQNMTMEEQRAALGDRLYIKVYELAPDHAPKIT 513
Query: 536 GMLLEMDQTEVLHLLESPEALKAKVAEAMEVLR 568
GM LEM+ E LL + L+ KV EA+ VL+
Sbjct: 514 GMFLEMNPKEAHTLLTNQRLLQDKVTEALCVLK 546
>gi|426247620|ref|XP_004023599.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Ovis aries]
Length = 383
Score = 347 bits (891), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 181/372 (48%), Positives = 256/372 (68%), Gaps = 11/372 (2%)
Query: 26 QFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAA 85
++ SLYVGDL +VT+ L+ FS VG VLS+ C RSLGY YVN+ ADA
Sbjct: 6 KYRQASLYVGDLHADVTEDLLFKKFSAVGPVLSI-TCHP----RSLGYAYVNFLQLADAQ 60
Query: 86 RALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNIL 145
+ALD +NF + KSIR+M+S RD +RKSG GN+FIKNLD+SID+K L++ FS+FG IL
Sbjct: 61 KALDTMNFDLIKGKSIRLMWSQRDAYLRKSGIGNVFIKNLDRSIDNKTLYEHFSAFGKIL 120
Query: 146 SCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIK 205
S K+ +D G S+G+ FV F+N+ +A AI+++NG L+ D ++FVG F +++RE +
Sbjct: 121 SSKVMSDDHG-SRGYAFVHFQNQIAADRAIEEMNGTLLKDCRLFVGRFKSRKDREA-EFQ 178
Query: 206 TK---FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDA 262
K F NV++KN + DE LK++F +YG S VM D GKSK FGFV+F++ + A
Sbjct: 179 NKAHEFTNVYIKNFGDEMDDERLKEVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDSHEAA 238
Query: 263 AKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDS 322
+AVE +NGK + + +VG+AQKK+ER+ ELK FEQ E + +G LYIKNL ++
Sbjct: 239 KRAVEEMNGKDINGQLLFVGRAQKKAERQAELKQMFEQLKHERFRRCRGAKLYIKNLDET 298
Query: 323 IDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPL 382
IDDEKL+ FS FG+I+ KVM++ G SKG G + FS+ EEA++A+ EMNG+++ SKPL
Sbjct: 299 IDDEKLRREFSSFGSISRVKVMQEE-GRSKGFGLICFSSAEEATKAMTEMNGRILGSKPL 357
Query: 383 YVAVAQRKEERR 394
+A+AQ+ ER+
Sbjct: 358 NIALAQKPXERK 369
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 106/288 (36%), Positives = 160/288 (55%), Gaps = 19/288 (6%)
Query: 118 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDK 177
++++ +L + L FS+ G +LS +S G+ +V F AQ A+D
Sbjct: 10 ASLYVGDLHADVTEDLLFKKFSAVGPVLSITCHP----RSLGYAYVNFLQLADAQKALDT 65
Query: 178 LNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITS 237
+N LI K + L +R+ K+ NVF+KNLD S ++ L + F +G I S
Sbjct: 66 MNFDLIKGKSIR----LMWSQRDAYLRKSGIGNVFIKNLDRSIDNKTLYEHFSAFGKILS 121
Query: 238 AVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQ 297
+ VM D G S+ + FV+F+N A +A+E +NG D +VG+ + + +RE E + +
Sbjct: 122 SKVMSDDHG-SRGYAFVHFQNQIAADRAIEEMNGTLLKDCRLFVGRFKSRKDREAEFQNK 180
Query: 298 FEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFV 357
+ N+YIKN GD +DDE+LKE+FS++G S KVM D SG SKG GFV
Sbjct: 181 AHEFT----------NVYIKNFGDEMDDERLKEVFSKYGKTLSVKVMTDSSGKSKGFGFV 230
Query: 358 AFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
+F + E A RA+ EMNGK I + L+V AQ+K ER+A L+ F Q++
Sbjct: 231 SFDSHEAAKRAVEEMNGKDINGQLLFVGRAQKKAERQAELKQMFEQLK 278
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 104/191 (54%), Gaps = 18/191 (9%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
T++Y+ + + D +L ++FS+ G+ LSV+V D S+ +S G+G+V++ + A RA++
Sbjct: 185 TNVYIKNFGDEMDDERLKEVFSKYGKTLSVKVMTD-SSGKSKGFGFVSFDSHEAAKRAVE 243
Query: 90 VLNFTPLNNK---------------SIRIMYSH-RDPSIRKSGTGNIFIKNLDKSIDHKA 133
+N +N + ++ M+ + R+ ++IKNLD++ID +
Sbjct: 244 EMNGKDINGQLLFVGRAQKKAERQAELKQMFEQLKHERFRRCRGAKLYIKNLDETIDDEK 303
Query: 134 LHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHF 193
L FSSFG+I K+ + G+SKGFG + F + E A A+ ++NG ++ K + +
Sbjct: 304 LRREFSSFGSISRVKVMQE-EGRSKGFGLICFSSAEEATKAMTEMNGRILGSKPLNIALA 362
Query: 194 LRKQERETVAI 204
+ ER+T I
Sbjct: 363 QKPXERKTFCI 373
>gi|392927774|ref|NP_510259.2| Protein PAB-2, isoform b [Caenorhabditis elegans]
gi|371570799|emb|CAA90446.2| Protein PAB-2, isoform b [Caenorhabditis elegans]
Length = 575
Score = 347 bits (890), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 178/344 (51%), Positives = 238/344 (69%), Gaps = 8/344 (2%)
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF ++ + +RIM+S RDP+ R++G GNIFIKNLD+ ID+K+++DTFS FGNILSCK+A
Sbjct: 1 MNFEVIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVA 60
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER--ETVAIKTKF 208
TD G SKG+GFV FE + SAQ AI+K+NGML++DK+V+VG F + +R E K+
Sbjct: 61 TDDEGNSKGYGFVHFETEHSAQTAIEKVNGMLLSDKKVYVGKFQPRAQRMKELGESGLKY 120
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NVFVKN E E L +F ++G ITSAVVM D GK K FGFV F + D A +AVE
Sbjct: 121 TNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEK 180
Query: 269 LNGKKFD--DREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
LN + D + V +AQKKSER ELK ++E +E V ++QG+NLY+KN+ + ++D+
Sbjct: 181 LNDSILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRYQGVNLYVKNIEEDLNDD 240
Query: 327 KLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 386
L++ FS FGTITS KVM D +G SKG GFV F PEEA+ A+ +MN KMI +KPLYVA+
Sbjct: 241 GLRDHFSSFGTITSAKVMVDENGRSKGFGFVCFEKPEEATAAVTDMNSKMIGAKPLYVAL 300
Query: 387 AQRKEERRARLQAQFSQ----MRPVAMGPSVPPRMPMYPPGPSG 426
AQRKE+RRA+L +Q+ Q +R VP +Y PG G
Sbjct: 301 AQRKEDRRAQLASQYMQRLATLRMGQQASGVPAMTQLYQPGQQG 344
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/305 (33%), Positives = 165/305 (54%), Gaps = 27/305 (8%)
Query: 19 AAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNY 78
AA +GN ++++ +LD + + +YD FS G +LS +V D S GYG+V++
Sbjct: 21 AARRAGN----GNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATD-DEGNSKGYGFVHF 75
Query: 79 ANPADAARALDVLNFTPLNNKSIRI-MYSHRDPSIRKSGTG-----NIFIKNLDKSIDHK 132
A A++ +N L++K + + + R +++ G N+F+KN + +D +
Sbjct: 76 ETEHSAQTAIEKVNGMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQE 135
Query: 133 ALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLI--NDKQVFV 190
L FS FG I S + TD G+ KGFGFV F ++++A A++KLN ++ D ++ V
Sbjct: 136 KLSAMFSKFGEITSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEKLNDSILEGTDCKLSV 195
Query: 191 GHFLRKQERETVAIKTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITS 237
+K ER + +K K+ N++VKN++E D+ L+ F +GTITS
Sbjct: 196 CRAQKKSER-SAELKRKYEALKQERVQRYQGVNLYVKNIEEDLNDDGLRDHFSSFGTITS 254
Query: 238 AVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQ 297
A VM D +G+SK FGFV FE ++A AV +N K + YV AQ+K +R +L Q
Sbjct: 255 AKVMVDENGRSKGFGFVCFEKPEEATAAVTDMNSKMIGAKPLYVALAQRKEDRRAQLASQ 314
Query: 298 FEQAM 302
+ Q +
Sbjct: 315 YMQRL 319
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
Query: 497 TALSTALANASPEQQRTLLGESLYPLVEQL--ERDAAAKVTGMLLEMDQTEVLHLLESPE 554
T S LA A+P++Q+ LLGE +Y L+E++ A K+TGM+LE+D E++ +L+ E
Sbjct: 486 TLTSHMLAQAAPQEQKQLLGERIYALIEKMFPNHKEAGKITGMMLEIDNAELIMMLQDAE 545
Query: 555 ALKAKVAEAMEVL 567
++KV EA VL
Sbjct: 546 LFRSKVEEAFGVL 558
>gi|7689377|gb|AAF67755.1|AF255335_1 poly(A)-binding protein [Spisula solidissima]
Length = 286
Score = 344 bits (883), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 171/288 (59%), Positives = 227/288 (78%), Gaps = 4/288 (1%)
Query: 104 MYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFV 163
M+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+FGNILSCKI +D G S+G+GFV
Sbjct: 1 MWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKIVSDEHG-SRGYGFV 59
Query: 164 QFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER-ETVAIK-TKFNNVFVKNLDESTT 221
FE +E+A+NAI+K+NGML+N K+VFVG F+ ++ER E + K KFNNV++KN E
Sbjct: 60 HFETEEAARNAIEKVNGMLLNGKKVFVGRFMNRRERLEQMGDKMKKFNNVYIKNFSEEID 119
Query: 222 DEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYV 281
DE LK F +G I SA VM DGK + FGFV++E + A KAV +N K F+++ YV
Sbjct: 120 DEKLKIWFETFGKIISAKVMTGYDGKGRGFGFVSYEEPEAAEKAVTEMNNKTFEEKTLYV 179
Query: 282 GKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSC 341
G+AQK++ER+ ELK +F++ +E ++++QG+NLY+KNL DSIDDEKL++ FS FGTITS
Sbjct: 180 GRAQKRAERQAELKDKFDRLKQERMNRYQGVNLYVKNLDDSIDDEKLRKEFSAFGTITSA 239
Query: 342 KVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQR 389
KVM + G SKG GFV FS+PEEA++A+ EMNG++IV+KPLYVA+AQR
Sbjct: 240 KVMTE-GGRSKGFGFVCFSSPEEATKAVTEMNGRIIVAKPLYVALAQR 286
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 96/275 (34%), Positives = 156/275 (56%), Gaps = 23/275 (8%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ +LD ++ + LYD FS G +LS ++ D R GYG+V++ A A++
Sbjct: 16 NVFIKNLDKSIDNKALYDTFSAFGNILSCKIVSDEHGSR--GYGFVHFETEEAARNAIEK 73
Query: 91 LNFTPLNNKSIRI-MYSHRDPSIRKSGT-----GNIFIKNLDKSIDHKALHDTFSSFGNI 144
+N LN K + + + +R + + G N++IKN + ID + L F +FG I
Sbjct: 74 VNGMLLNGKKVFVGRFMNRRERLEQMGDKMKKFNNVYIKNFSEEIDDEKLKIWFETFGKI 133
Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAI 204
+S K+ T G+ +GFGFV +E E+A+ A+ ++N +K ++VG ++ ER+ +
Sbjct: 134 ISAKVMTGYDGKGRGFGFVSYEEPEAAEKAVTEMNNKTFEEKTLYVGRAQKRAERQA-EL 192
Query: 205 KTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCF 251
K KF+ N++VKNLD+S DE L+K F +GTITSA VM +G G+SK F
Sbjct: 193 KDKFDRLKQERMNRYQGVNLYVKNLDDSIDDEKLRKEFSAFGTITSAKVMTEG-GRSKGF 251
Query: 252 GFVNFENADDAAKAVEALNGKKFDDREWYVGKAQK 286
GFV F + ++A KAV +NG+ + YV AQ+
Sbjct: 252 GFVCFSSPEEATKAVTEMNGRIIVAKPLYVALAQR 286
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 79/205 (38%), Positives = 118/205 (57%), Gaps = 11/205 (5%)
Query: 205 KTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAK 264
K+ NVF+KNLD+S ++ L F +G I S ++ D G S+ +GFV+FE + A
Sbjct: 11 KSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKIVSDEHG-SRGYGFVHFETEEAARN 69
Query: 265 AVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSID 324
A+E +NG + ++ +VG+ + ER ++ M + + KF N+YIKN + ID
Sbjct: 70 AIEKVNGMLLNGKKVFVGRFMNRRERLEQ--------MGDKMKKFN--NVYIKNFSEEID 119
Query: 325 DEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYV 384
DEKLK F FG I S KVM G +G GFV++ PE A +A+ EMN K K LYV
Sbjct: 120 DEKLKIWFETFGKIISAKVMTGYDGKGRGFGFVSYEEPEAAEKAVTEMNNKTFEEKTLYV 179
Query: 385 AVAQRKEERRARLQAQFSQMRPVAM 409
AQ++ ER+A L+ +F +++ M
Sbjct: 180 GRAQKRAERQAELKDKFDRLKQERM 204
Score = 45.8 bits (107), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 49/91 (53%), Gaps = 2/91 (2%)
Query: 2 AQIQVQHQAQMSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRV 61
AQ + + QA++ N++ +LYV +LD ++ D +L FS G + S +V
Sbjct: 182 AQKRAERQAELKDKFDRLKQERMNRYQGVNLYVKNLDDSIDDEKLRKEFSAFGTITSAKV 241
Query: 62 CRDLSTRRSLGYGYVNYANPADAARALDVLN 92
+ RS G+G+V +++P +A +A+ +N
Sbjct: 242 MTEGG--RSKGFGFVCFSSPEEATKAVTEMN 270
>gi|168229272|ref|NP_001094949.1| poly(A) binding protein, cytoplasmic 4-like [Mus musculus]
gi|148703238|gb|EDL35185.1| mCG12357 [Mus musculus]
Length = 370
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 178/366 (48%), Positives = 255/366 (69%), Gaps = 4/366 (1%)
Query: 26 QFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAA 85
++ SLYVGDL +VT+ L+ FS VG VLS+R+CRDL ++RSLGY YVN+ DA
Sbjct: 6 KYRAASLYVGDLHEDVTEDMLFRKFSTVGPVLSIRICRDLISQRSLGYAYVNFLQVNDAQ 65
Query: 86 RALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNIL 145
+AL +NF + KSIR+M+S RD +R+SG GN+FIKNLDKSID+K L++ FS FG I+
Sbjct: 66 KALVTMNFDVIKGKSIRLMWSQRDACLRRSGVGNVFIKNLDKSIDNKTLYEHFSPFGTIM 125
Query: 146 SCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIK 205
S K+ TDG G SKG+GFV ++++ +A AI+++NG L+ + +FV F +++RE
Sbjct: 126 SSKVMTDGEG-SKGYGFVHYQDRRAADRAIEEMNGKLLRESTLFVARFKSRKDREAELRD 184
Query: 206 --TKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAA 263
T+F NV++KN + DE L+++F +YG S VM+D GKSK FGFV+F++ + A
Sbjct: 185 KPTEFTNVYIKNFGDDVDDEKLREVFSKYGQTLSVKVMKDATGKSKGFGFVSFDSHEAAK 244
Query: 264 KAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSI 323
AVE +NG+ + + +VG+AQKK ER+ ELK FEQ KE + Q LYIKNL D+I
Sbjct: 245 NAVEDMNGQDINGQTIFVGRAQKKVERQAELKEMFEQMKKERIRARQAAKLYIKNLDDTI 304
Query: 324 DDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLY 383
DDE L++ FS FG+I KVM++ +G SKG G + F +PE A++A+AEMNG+++ SKPL
Sbjct: 305 DDETLRKEFSVFGSICRVKVMQE-AGQSKGFGLICFFSPEAAAKAMAEMNGRILGSKPLN 363
Query: 384 VAVAQR 389
+A+ Q+
Sbjct: 364 IALGQK 369
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 107/295 (36%), Positives = 172/295 (58%), Gaps = 18/295 (6%)
Query: 114 KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATD-GSGQSKGFGFVQFENKESAQ 172
K ++++ +L + + L FS+ G +LS +I D S +S G+ +V F AQ
Sbjct: 6 KYRAASLYVGDLHEDVTEDMLFRKFSTVGPVLSIRICRDLISQRSLGYAYVNFLQVNDAQ 65
Query: 173 NAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEY 232
A+ +N +I K + L +R+ ++ NVF+KNLD+S ++ L + F +
Sbjct: 66 KALVTMNFDVIKGKSIR----LMWSQRDACLRRSGVGNVFIKNLDKSIDNKTLYEHFSPF 121
Query: 233 GTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQ 292
GTI S+ VM DG+G SK +GFV++++ A +A+E +NGK + +V + + + +RE
Sbjct: 122 GTIMSSKVMTDGEG-SKGYGFVHYQDRRAADRAIEEMNGKLLRESTLFVARFKSRKDREA 180
Query: 293 ELKGQFEQAMKETVDK-FQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGIS 351
EL+ DK + N+YIKN GD +DDEKL+E+FS++G S KVM+D +G S
Sbjct: 181 ELR-----------DKPTEFTNVYIKNFGDDVDDEKLREVFSKYGQTLSVKVMKDATGKS 229
Query: 352 KGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRP 406
KG GFV+F + E A A+ +MNG+ I + ++V AQ+K ER+A L+ F QM+
Sbjct: 230 KGFGFVSFDSHEAAKNAVEDMNGQDINGQTIFVGRAQKKVERQAELKEMFEQMKK 284
>gi|297851860|ref|XP_002893811.1| PAB1 binding protein 1 [Arabidopsis lyrata subsp. lyrata]
gi|297339653|gb|EFH70070.1| PAB1 binding protein 1 [Arabidopsis lyrata subsp. lyrata]
Length = 403
Score = 341 bits (874), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 176/360 (48%), Positives = 246/360 (68%), Gaps = 15/360 (4%)
Query: 88 LDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSC 147
+++LNF L K +RIM+S RDPS R SG GN+F+KNLD+SID+K L D FS+FG +LSC
Sbjct: 1 MEMLNFYKLKGKPMRIMFSERDPSKRLSGRGNVFVKNLDESIDNKQLSDMFSAFGKVLSC 60
Query: 148 KIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK 207
K+ D SG SKG+GFVQF ++ S A + NG LI ++ + V F+ +++ + +
Sbjct: 61 KVVRDASGVSKGYGFVQFYSELSVNIACNVRNGTLIRNQHIHVSPFVSRRQWDESRV--- 117
Query: 208 FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVE 267
F NV+VKNL E+TTD+DLK IF E+G ITSAVVM+D +GKS+ FGFVNFE A+ A A++
Sbjct: 118 FTNVYVKNLAETTTDDDLKMIFEEFGEITSAVVMKDKEGKSRMFGFVNFEKAEAAVTAID 177
Query: 268 ALNGKKFDDREWYVGKAQKKSEREQELKGQFE-QAMKETVDKFQGLNLYIKNLGDSIDDE 326
+NG D++E +VG+AQ+K R Q+LK F+ + +K + +G NLY+KNL S+D+
Sbjct: 178 KMNGTIVDEKELHVGRAQRKKNRIQDLKVIFKLEKIKRDMKTRKGTNLYVKNLDYSVDNT 237
Query: 327 KLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 386
KL+ELFSEFGTI SCKVM P+ ISKG GFV FST EEAS+A+ +MNGK++ +KP+YV++
Sbjct: 238 KLQELFSEFGTIISCKVMVHPNRISKGVGFVEFSTSEEASKAMLKMNGKVVGNKPIYVSL 297
Query: 387 AQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQA-PPAIIPPQM 445
AQ KEE + L QF+ + + ++ P +P ++ QA PP IP M
Sbjct: 298 AQCKEEHKLHLHTQFNNLPWNVVSSTIAPSPHQHP----------IFSQAWPPMSIPNTM 347
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 104/283 (36%), Positives = 158/283 (55%), Gaps = 17/283 (6%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
+++V +LD ++ + QL D+FS G+VLS +V RD S S GYG+V + + A +V
Sbjct: 32 NVFVKNLDESIDNKQLSDMFSAFGKVLSCKVVRDASG-VSKGYGFVQFYSELSVNIACNV 90
Query: 91 LNFTPLNNKSIRI--MYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
N T + N+ I + S R + T N+++KNL ++ L F FG I S
Sbjct: 91 RNGTLIRNQHIHVSPFVSRRQWDESRVFT-NVYVKNLAETTTDDDLKMIFEEFGEITSAV 149
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER--------- 199
+ D G+S+ FGFV FE E+A AIDK+NG ++++K++ VG RK+ R
Sbjct: 150 VMKDKEGKSRMFGFVNFEKAEAAVTAIDKMNGTIVDEKELHVGRAQRKKNRIQDLKVIFK 209
Query: 200 -ETVA--IKT-KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVN 255
E + +KT K N++VKNLD S + L+++F E+GTI S VM + SK GFV
Sbjct: 210 LEKIKRDMKTRKGTNLYVKNLDYSVDNTKLQELFSEFGTIISCKVMVHPNRISKGVGFVE 269
Query: 256 FENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQF 298
F +++A+KA+ +NGK ++ YV AQ K E + L QF
Sbjct: 270 FSTSEEASKAMLKMNGKVVGNKPIYVSLAQCKEEHKLHLHTQF 312
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 106/201 (52%), Gaps = 23/201 (11%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
T++YV +L TD L +F + G++ S V +D + + +G+VN+ A A+D
Sbjct: 119 TNVYVKNLAETTTDDDLKMIFEEFGEITSAVVMKDKEGKSRM-FGFVNFEKAEAAVTAID 177
Query: 90 VLNFTPLNNKSIRIMYSH-------------------RDPSIRKSGTGNIFIKNLDKSID 130
+N T ++ K + + + RD RK GT N+++KNLD S+D
Sbjct: 178 KMNGTIVDEKELHVGRAQRKKNRIQDLKVIFKLEKIKRDMKTRK-GT-NLYVKNLDYSVD 235
Query: 131 HKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFV 190
+ L + FS FG I+SCK+ + SKG GFV+F E A A+ K+NG ++ +K ++V
Sbjct: 236 NTKLQELFSEFGTIISCKVMVHPNRISKGVGFVEFSTSEEASKAMLKMNGKVVGNKPIYV 295
Query: 191 GHFLRKQERETVAIKTKFNNV 211
+ +E + + T+FNN+
Sbjct: 296 S-LAQCKEEHKLHLHTQFNNL 315
>gi|354466116|ref|XP_003495521.1| PREDICTED: polyadenylate-binding protein 4-like [Cricetulus
griseus]
gi|344243583|gb|EGV99686.1| Polyadenylate-binding protein 4-like [Cricetulus griseus]
Length = 370
Score = 341 bits (874), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 181/366 (49%), Positives = 256/366 (69%), Gaps = 4/366 (1%)
Query: 26 QFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAA 85
++ SLYVGDL +VT+ L+ F+ VG VLS+R+CRDL +RRSLGY YVN+ DA
Sbjct: 6 KYRAASLYVGDLHEDVTEDVLFRKFNTVGPVLSIRICRDLVSRRSLGYAYVNFLQLDDAQ 65
Query: 86 RALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNIL 145
+ALD +NF + KSIR+M+S RD +RKSG GN+FIKNLDKSID+K L++ FS FG IL
Sbjct: 66 KALDTMNFDLIQGKSIRLMWSQRDAYLRKSGIGNVFIKNLDKSIDNKTLYEHFSPFGKIL 125
Query: 146 SCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET--VA 203
S K+ +D G S+G+GFV ++++ +A AI+++NG L+ D VFV F +++RE +
Sbjct: 126 SSKVMSDEEG-SRGYGFVHYQDQSAADRAIEEMNGKLLRDCTVFVDRFKSRKDREAELRS 184
Query: 204 IKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAA 263
++F NV++KNL ++ DE LK IF +YG S VM+D +GKSK FGFV+F N + A
Sbjct: 185 KTSEFTNVYIKNLGDNMDDEGLKNIFSKYGQTLSVKVMKDDNGKSKGFGFVSFYNHEAAR 244
Query: 264 KAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSI 323
AVE +NG+ + + +VG+AQKK ER+ ELK +FEQ KE + Q LYIKNL ++I
Sbjct: 245 NAVEEMNGQDINGQTIFVGRAQKKVERQAELKEKFEQMKKERIRARQAAKLYIKNLDETI 304
Query: 324 DDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLY 383
DDE L+ FS FG+I KVM++ +G SKG G + F +PE A++A+AEMNG+++ SK L
Sbjct: 305 DDETLRREFSSFGSICRVKVMQE-AGQSKGFGLICFFSPEAAAKAMAEMNGRILGSKALN 363
Query: 384 VAVAQR 389
+A+ Q+
Sbjct: 364 IALGQK 369
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 106/294 (36%), Positives = 171/294 (58%), Gaps = 16/294 (5%)
Query: 114 KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATD-GSGQSKGFGFVQFENKESAQ 172
K ++++ +L + + L F++ G +LS +I D S +S G+ +V F + AQ
Sbjct: 6 KYRAASLYVGDLHEDVTEDVLFRKFNTVGPVLSIRICRDLVSRRSLGYAYVNFLQLDDAQ 65
Query: 173 NAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEY 232
A+D +N LI K + L +R+ K+ NVF+KNLD+S ++ L + F +
Sbjct: 66 KALDTMNFDLIQGKSIR----LMWSQRDAYLRKSGIGNVFIKNLDKSIDNKTLYEHFSPF 121
Query: 233 GTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQ 292
G I S+ VM D +G S+ +GFV++++ A +A+E +NGK D +V + + + +RE
Sbjct: 122 GKILSSKVMSDEEG-SRGYGFVHYQDQSAADRAIEEMNGKLLRDCTVFVDRFKSRKDREA 180
Query: 293 ELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISK 352
EL+ + + N+YIKNLGD++DDE LK +FS++G S KVM+D +G SK
Sbjct: 181 ELRSKTSEFT----------NVYIKNLGDNMDDEGLKNIFSKYGQTLSVKVMKDDNGKSK 230
Query: 353 GSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRP 406
G GFV+F E A A+ EMNG+ I + ++V AQ+K ER+A L+ +F QM+
Sbjct: 231 GFGFVSFYNHEAARNAVEEMNGQDINGQTIFVGRAQKKVERQAELKEKFEQMKK 284
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 107/202 (52%), Gaps = 20/202 (9%)
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD-GDGKSKCFGFVNFENADDAAKAVEA 268
+++V +L E T++ L + F G + S + RD +S + +VNF DDA KA++
Sbjct: 11 SLYVGDLHEDVTEDVLFRKFNTVGPVLSIRICRDLVSRRSLGYAYVNFLQLDDAQKALDT 70
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGL-NLYIKNLGDSIDDEK 327
+N FD Q KS R + ++ + G+ N++IKNL SID++
Sbjct: 71 MN---FD-------LIQGKSIR-------LMWSQRDAYLRKSGIGNVFIKNLDKSIDNKT 113
Query: 328 LKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 387
L E FS FG I S KVM D G S+G GFV + A RA+ EMNGK++ ++V
Sbjct: 114 LYEHFSPFGKILSSKVMSDEEG-SRGYGFVHYQDQSAADRAIEEMNGKLLRDCTVFVDRF 172
Query: 388 QRKEERRARLQAQFSQMRPVAM 409
+ +++R A L+++ S+ V +
Sbjct: 173 KSRKDREAELRSKTSEFTNVYI 194
>gi|157823445|ref|NP_001099899.1| polyadenylate-binding protein 4-like [Rattus norvegicus]
gi|149027259|gb|EDL82942.1| rCG37805 [Rattus norvegicus]
Length = 370
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 179/367 (48%), Positives = 254/367 (69%), Gaps = 6/367 (1%)
Query: 26 QFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAA 85
++ SLYVGDL +VT+ L+ F+ VG VLS+R+CRDL + RSLGYGYVN+ DA
Sbjct: 6 KYRAASLYVGDLHEDVTEDLLFRKFNTVGPVLSIRICRDLISHRSLGYGYVNFLQVGDAQ 65
Query: 86 RALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNIL 145
+AL+ +NF + KSIR+M+S RD +RKSG GN+FIKNLDKSID+K L++ FS FG I+
Sbjct: 66 KALETMNFDLIKGKSIRLMWSQRDACLRKSGIGNVFIKNLDKSIDNKTLYEHFSPFGKIM 125
Query: 146 SCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIK 205
S K+ TD G SKG+GFV ++++ +A AI+++NG L+ D +FV F +++RE ++
Sbjct: 126 SSKVMTDEEG-SKGYGFVHYQDQRAADRAIEEMNGKLLRDSTLFVARFKSRKDREA-ELR 183
Query: 206 TK---FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDA 262
K F NV++KN + DE L+ +F +YG S VM+D GKSK FGFV+F++ A
Sbjct: 184 EKPAEFTNVYIKNFGDDMDDESLRSVFSKYGQTLSVKVMKDASGKSKRFGFVSFDSHKAA 243
Query: 263 AKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDS 322
AVE +NG+ + + +VG+AQKK ER+ ELK FEQ KE + Q LYIKNL D+
Sbjct: 244 KNAVEDMNGRDINGQTIFVGRAQKKVERQAELKEMFEQMKKERIRARQAAKLYIKNLDDT 303
Query: 323 IDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPL 382
IDDE L++ FS FG+I KVM++ +G SKG G + F +PE A++A+AEMNG+++ SKPL
Sbjct: 304 IDDETLRKEFSVFGSICRVKVMQE-AGQSKGFGLICFFSPEAAAKAMAEMNGRILGSKPL 362
Query: 383 YVAVAQR 389
+A+ Q+
Sbjct: 363 NIALGQK 369
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/294 (35%), Positives = 170/294 (57%), Gaps = 16/294 (5%)
Query: 114 KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATD-GSGQSKGFGFVQFENKESAQ 172
K ++++ +L + + L F++ G +LS +I D S +S G+G+V F AQ
Sbjct: 6 KYRAASLYVGDLHEDVTEDLLFRKFNTVGPVLSIRICRDLISHRSLGYGYVNFLQVGDAQ 65
Query: 173 NAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEY 232
A++ +N LI K + L +R+ K+ NVF+KNLD+S ++ L + F +
Sbjct: 66 KALETMNFDLIKGKSIR----LMWSQRDACLRKSGIGNVFIKNLDKSIDNKTLYEHFSPF 121
Query: 233 GTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQ 292
G I S+ VM D +G SK +GFV++++ A +A+E +NGK D +V + + + +RE
Sbjct: 122 GKIMSSKVMTDEEG-SKGYGFVHYQDQRAADRAIEEMNGKLLRDSTLFVARFKSRKDREA 180
Query: 293 ELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISK 352
EL+ E+ + T N+YIKN GD +DDE L+ +FS++G S KVM+D SG SK
Sbjct: 181 ELR---EKPAEFT-------NVYIKNFGDDMDDESLRSVFSKYGQTLSVKVMKDASGKSK 230
Query: 353 GSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRP 406
GFV+F + + A A+ +MNG+ I + ++V AQ+K ER+A L+ F QM+
Sbjct: 231 RFGFVSFDSHKAAKNAVEDMNGRDINGQTIFVGRAQKKVERQAELKEMFEQMKK 284
>gi|432118841|gb|ELK38215.1| Polyadenylate-binding protein 5 [Myotis davidii]
Length = 382
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 181/359 (50%), Positives = 241/359 (67%), Gaps = 7/359 (1%)
Query: 34 VGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNF 93
VGDLD +VT+ LY F G + R+CRD TR LGYGYVN+ PADA AL+ +NF
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPETRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 94 TPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG 153
+N K R+M+S D +RKSG GNIFIKNLDKSID++AL FS+FGNILSCK+ D
Sbjct: 82 DLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDD 141
Query: 154 SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK----FN 209
+G SKG+ +V F++ +A AI +NG+ +N++QV+VG F +ER ++T+ F
Sbjct: 142 NG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEER-AAEVRTRDRATFT 199
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEAL 269
NVFVKN + DE LK+IF EYG S V+RD GKSK FGFV +E + A KAV L
Sbjct: 200 NVFVKNFGDEVDDEKLKEIFSEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDL 259
Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLK 329
+GK D + YVG+AQKK ER EL+ +FE+ + + G+ +YIKNL ++IDDEKL+
Sbjct: 260 HGKSIDGKALYVGRAQKKIERLAELRRRFERLKVKEKSRPPGVPVYIKNLDETIDDEKLR 319
Query: 330 ELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
E FS FG+I+ KVM + G KG G V FS+ EEA++A+ EMNG+M+ SKPL+V + Q
Sbjct: 320 EEFSSFGSISRAKVMVE-VGQGKGFGVVCFSSFEEATKAVGEMNGRMVGSKPLHVTLGQ 377
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 106/300 (35%), Positives = 169/300 (56%), Gaps = 17/300 (5%)
Query: 122 IKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSK-GFGFVQFENKESAQNAIDKLNG 180
+ +LD + L+ F G + +I D +S G+G+V F A+ A++ +N
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPETRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 181 MLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVV 240
LIN K + Q + + K+ N+F+KNLD+S + L +F +G I S V
Sbjct: 82 DLINGKPF---RLMWSQPDDRLR-KSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKV 137
Query: 241 MRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQ 300
+ D +G SK + +V+F++ A +A+ +NG + ++R+ YVG+ + ER E++
Sbjct: 138 VCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVR----- 191
Query: 301 AMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFS 360
T D+ N+++KN GD +DDEKLKE+FSE+G S KV+RD SG SKG GFV +
Sbjct: 192 ----TRDRATFTNVFVKNFGDEVDDEKLKEIFSEYGPTESVKVIRDASGKSKGFGFVRYE 247
Query: 361 TPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMY 420
T E A +A+ +++GK I K LYV AQ+K ER A L+ +F +++ S PP +P+Y
Sbjct: 248 THEAAQKAVLDLHGKSIDGKALYVGRAQKKIERLAELRRRFERLK--VKEKSRPPGVPVY 305
>gi|226358689|gb|ACO51197.1| poly A binding protein, cytoplasmic 1 a [Hypophthalmichthys
nobilis]
Length = 290
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 166/292 (56%), Positives = 223/292 (76%), Gaps = 4/292 (1%)
Query: 93 FTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATD 152
F + + +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FGNILSCK+ D
Sbjct: 1 FFVIKGRPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD 60
Query: 153 GSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER--ETVAIKTKFNN 210
+G SKG+GFV FE E+A+ AI+K+NGML+ND++VFVG F ++ER E A +F N
Sbjct: 61 ENG-SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSRKERGAEMGARAKEFTN 119
Query: 211 VFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALN 270
V++KN E DE LK+IF +YG S VM D GKSK FGFV+FE +DA +AV+ +N
Sbjct: 120 VYIKNFGEDMDDEKLKEIFSKYGPALSIRVMTDESGKSKGFGFVSFERHEDAQRAVDEMN 179
Query: 271 GKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKE 330
GK+ + ++ YVG+AQKK ER+ ELK +FEQ ++ + ++QG+NLY+KNL D +DDE+L++
Sbjct: 180 GKEMNGKQVYVGRAQKKGERQTELKRKFEQMKQDRMTRYQGVNLYVKNLDDGLDDERLRK 239
Query: 331 LFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPL 382
FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +KPL
Sbjct: 240 EFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPL 290
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 104/264 (39%), Positives = 157/264 (59%), Gaps = 29/264 (10%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ +LD ++ + LYD FS G +LS +V D + S GYG+V++ A RA++
Sbjct: 27 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETHEAAERAIEK 84
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGT---------GNIFIKNLDKSIDHKALHDTFSSF 141
+N LN++ + + R S ++ G N++IKN + +D + L + FS +
Sbjct: 85 MNGMLLNDRKV---FVGRFKSRKERGAEMGARAKEFTNVYIKNFGEDMDDEKLKEIFSKY 141
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
G LS ++ TD SG+SKGFGFV FE E AQ A+D++NG +N KQV+VG +K ER+T
Sbjct: 142 GPALSIRVMTDESGKSKGFGFVSFERHEDAQRAVDEMNGKEMNGKQVYVGRAQKKGERQT 201
Query: 202 VAIKTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKS 248
+K KF N++VKNLD+ DE L+K F +GTITSA VM +G G+S
Sbjct: 202 -ELKRKFEQMKQDRMTRYQGVNLYVKNLDDGLDDERLRKEFSPFGTITSAKVMMEG-GRS 259
Query: 249 KCFGFVNFENADDAAKAVEALNGK 272
K FGFV F + ++A KAV +NG+
Sbjct: 260 KGFGFVCFSSPEEATKAVTEMNGR 283
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 86/205 (41%), Positives = 128/205 (62%), Gaps = 11/205 (5%)
Query: 205 KTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAK 264
K+ N+F+KNLD+S ++ L F +G I S V+ D +G SK +GFV+FE + A +
Sbjct: 22 KSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETHEAAER 80
Query: 265 AVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSID 324
A+E +NG +DR+ +VG+ + + ER E+ + ++ N+YIKN G+ +D
Sbjct: 81 AIEKMNGMLLNDRKVFVGRFKSRKERGAEMGARAKEFT----------NVYIKNFGEDMD 130
Query: 325 DEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYV 384
DEKLKE+FS++G S +VM D SG SKG GFV+F E+A RA+ EMNGK + K +YV
Sbjct: 131 DEKLKEIFSKYGPALSIRVMTDESGKSKGFGFVSFERHEDAQRAVDEMNGKEMNGKQVYV 190
Query: 385 AVAQRKEERRARLQAQFSQMRPVAM 409
AQ+K ER+ L+ +F QM+ M
Sbjct: 191 GRAQKKGERQTELKRKFEQMKQDRM 215
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 100/187 (53%), Gaps = 22/187 (11%)
Query: 17 GVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYV 76
G GA +F T++Y+ + ++ D +L ++FS+ G LS+RV D S +S G+G+V
Sbjct: 107 GAEMGARAKEF--TNVYIKNFGEDMDDEKLKEIFSKYGPALSIRVMTDESG-KSKGFGFV 163
Query: 77 NYANPADAARALDVLNFTPLNNKSIRIMYSHR-----------------DPSIRKSGTGN 119
++ DA RA+D +N +N K + + + + D R G N
Sbjct: 164 SFERHEDAQRAVDEMNGKEMNGKQVYVGRAQKKGERQTELKRKFEQMKQDRMTRYQGV-N 222
Query: 120 IFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLN 179
+++KNLD +D + L FS FG I S K+ +G G+SKGFGFV F + E A A+ ++N
Sbjct: 223 LYVKNLDDGLDDERLRKEFSPFGTITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTEMN 281
Query: 180 GMLINDK 186
G ++ K
Sbjct: 282 GRIVATK 288
>gi|357440279|ref|XP_003590417.1| Polyadenylate-binding protein [Medicago truncatula]
gi|355479465|gb|AES60668.1| Polyadenylate-binding protein [Medicago truncatula]
Length = 591
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 167/347 (48%), Positives = 237/347 (68%), Gaps = 6/347 (1%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
+LYVGDL +VTD+QLY FS+ ++S RVC+D +T +SL YGYVN ++ +A RA+++
Sbjct: 16 TLYVGDLHSDVTDAQLYKAFSEFNTLISARVCKDSATGKSLCYGYVNLSSHQEAIRAIEL 75
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
N + LN K IR+M+ RD RKSG GN+F+KNL SID+ LHD F +GNILS KIA
Sbjct: 76 KNHSSLNGKVIRVMWLSRDADARKSGKGNVFVKNLAASIDNVGLHDLFQKYGNILSSKIA 135
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNN 210
G+SKGFG++QF+++ESA AI K+NG + DKQ++VG F+RK ER + KF N
Sbjct: 136 RSEDGKSKGFGYIQFDSEESANVAIQKMNGSTVRDKQIYVGKFIRKSERSLPDLDAKFTN 195
Query: 211 VFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALN 270
++VKNLD T++ L + F +G I S + +D +G+SK FGFVN+++ DDA +A+EA++
Sbjct: 196 LYVKNLDPVVTEKHLGEKFSSFGKIVSLAIKKDENGQSKGFGFVNYDSPDDARRAMEAMD 255
Query: 271 GKKFDDREWYVGKAQKKSEREQELKGQF-EQAMKETVDKFQGLNLYIKNLGDSIDDEKLK 329
G +F + YV +AQKK EREQ L F E+ +K G N+Y+KN+ S+ DE+L+
Sbjct: 256 GSQFGSKILYVARAQKKVEREQILHHLFVEKGLKH-----MGSNIYVKNIDTSVGDEELR 310
Query: 330 ELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKM 376
+ FS G + S KVMRD G SKG GFV FST EA ++++ NG++
Sbjct: 311 DHFSACGEVLSAKVMRDDKGTSKGFGFVCFSTVVEAFKSMSCFNGEL 357
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 158/296 (53%), Gaps = 19/296 (6%)
Query: 120 IFIKNLDKSIDHKALHDTFSSFGNILSCKIATD-GSGQSKGFGFVQFENKESAQNAIDKL 178
+++ +L + L+ FS F ++S ++ D +G+S +G+V + + A AI+
Sbjct: 17 LYVGDLHSDVTDAQLYKAFSEFNTLISARVCKDSATGKSLCYGYVNLSSHQEAIRAIELK 76
Query: 179 NGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSA 238
N +N K + V R+ A K+ NVFVKNL S + L +F +YG I S+
Sbjct: 77 NHSSLNGKVIRVMWL----SRDADARKSGKGNVFVKNLAASIDNVGLHDLFQKYGNILSS 132
Query: 239 VVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQ-ELKGQ 297
+ R DGKSK FG++ F++ + A A++ +NG D++ YVGK +KSER +L +
Sbjct: 133 KIARSEDGKSKGFGYIQFDSEESANVAIQKMNGSTVRDKQIYVGKFIRKSERSLPDLDAK 192
Query: 298 FEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFV 357
F NLY+KNL + ++ L E FS FG I S + +D +G SKG GFV
Sbjct: 193 FT-------------NLYVKNLDPVVTEKHLGEKFSSFGKIVSLAIKKDENGQSKGFGFV 239
Query: 358 AFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSV 413
+ +P++A RA+ M+G SK LYVA AQ+K ER L F + MG ++
Sbjct: 240 NYDSPDDARRAMEAMDGSQFGSKILYVARAQKKVEREQILHHLFVEKGLKHMGSNI 295
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 93/166 (56%), Gaps = 15/166 (9%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
T+LYV +LD VT+ L + FS G+++S+ + +D +S G+G+VNY +P DA RA++
Sbjct: 194 TNLYVKNLDPVVTEKHLGEKFSSFGKIVSLAIKKD-ENGQSKGFGFVNYDSPDDARRAME 252
Query: 90 VLNFTPLNNKSIRIMYSHR-------------DPSIRKSGTGNIFIKNLDKSIDHKALHD 136
++ + +K + + + + + ++ G+ NI++KN+D S+ + L D
Sbjct: 253 AMDGSQFGSKILYVARAQKKVEREQILHHLFVEKGLKHMGS-NIYVKNIDTSVGDEELRD 311
Query: 137 TFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGML 182
FS+ G +LS K+ D G SKGFGFV F A ++ NG L
Sbjct: 312 HFSACGEVLSAKVMRDDKGTSKGFGFVCFSTVVEAFKSMSCFNGEL 357
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 24 GNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPAD 83
G + + +++YV ++D +V D +L D FS G+VLS +V RD S G+G+V ++ +
Sbjct: 287 GLKHMGSNIYVKNIDTSVGDEELRDHFSACGEVLSAKVMRD-DKGTSKGFGFVCFSTVVE 345
Query: 84 AARALDVLN 92
A +++ N
Sbjct: 346 AFKSMSCFN 354
>gi|297834512|ref|XP_002885138.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330978|gb|EFH61397.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 542
Score = 334 bits (857), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 188/421 (44%), Positives = 265/421 (62%), Gaps = 8/421 (1%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL +VT+ L FS VLSV +CR+ T +SL Y Y+N+ +P A+ A+
Sbjct: 22 SLYVGDLSPDVTEQDLIHRFSLTVPVLSVHLCRNSVTGKSLCYAYINFDSPFSASNAMAR 81
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRK-SGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKI 149
LN T L K++RIM+S RD S R+ +G GN+++KNLD SI L F+ FG ILSCK+
Sbjct: 82 LNHTDLKGKAMRIMWSQRDLSYRRRTGFGNLYVKNLDISITSSGLERMFNPFGVILSCKV 141
Query: 150 ATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFN 209
+ +GQSKGFGFVQFE ++SA A L+G +++ K++FV F+ K ER +A F
Sbjct: 142 VEE-NGQSKGFGFVQFETEQSAVTARSALHGSMVDGKKLFVAKFINKNERVAMAGNKGFT 200
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEAL 269
NV+VKNL E+ T++ L ++F +YGT++S VVMRDG G+S+ FGFVNF + ++A KAV++L
Sbjct: 201 NVYVKNLIENITEDILHRLFSQYGTVSSVVVMRDGMGRSRGFGFVNFCHPENAKKAVDSL 260
Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLK 329
+G++ + +VGKA K+ ER + LK ++ + + NLY+KNL +S++D L+
Sbjct: 261 HGRQVGSKTLFVGKALKRDERREMLKHKYRDNFIAKSN-MRWSNLYVKNLSESMNDTTLR 319
Query: 330 ELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQR 389
E+F +G I S KVMR +G SKG GFV FS EE+ +A +NG + K L V VA+R
Sbjct: 320 EIFGRYGQIVSAKVMRHENGRSKGFGFVCFSNREESKQAKRYLNGFSVDGKLLVVRVAER 379
Query: 390 KEERRARLQAQF-SQMRPVAMGPSVP-PRMPM--YPPGPSGLGQQFLYGQAPPAIIPPQM 445
KE+R RLQ F +Q R P VP P P+ Y P G Q F G A + Q+
Sbjct: 380 KEDRLKRLQQYFHAQPRHYTQAPLVPSPAQPVLSYVPSSYGYLQPFHVG-ASYYYMGTQL 438
Query: 446 P 446
P
Sbjct: 439 P 439
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 107/185 (57%), Gaps = 16/185 (8%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
T++YV +L N+T+ L+ LFSQ G V SV V RD RS G+G+VN+ +P +A +A+D
Sbjct: 200 TNVYVKNLIENITEDILHRLFSQYGTVSSVVVMRD-GMGRSRGFGFVNFCHPENAKKAVD 258
Query: 90 VLNFTPLNNKSI-----------RIMYSH--RDPSIRKSGT--GNIFIKNLDKSIDHKAL 134
L+ + +K++ R M H RD I KS N+++KNL +S++ L
Sbjct: 259 SLHGRQVGSKTLFVGKALKRDERREMLKHKYRDNFIAKSNMRWSNLYVKNLSESMNDTTL 318
Query: 135 HDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFL 194
+ F +G I+S K+ +G+SKGFGFV F N+E ++ A LNG ++ K + V
Sbjct: 319 REIFGRYGQIVSAKVMRHENGRSKGFGFVCFSNREESKQAKRYLNGFSVDGKLLVVRVAE 378
Query: 195 RKQER 199
RK++R
Sbjct: 379 RKEDR 383
>gi|395506976|ref|XP_003757804.1| PREDICTED: polyadenylate-binding protein 1-like [Sarcophilus
harrisii]
Length = 594
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 200/479 (41%), Positives = 284/479 (59%), Gaps = 63/479 (13%)
Query: 147 CKIA--TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV-- 202
C++A D +G S+GFGFV FE +E+A AI +NGML+ND++VFVGHF +QERE
Sbjct: 111 CRVAVVCDENG-SRGFGFVHFETQEAANQAISTMNGMLLNDRKVFVGHFKSRQEREAELG 169
Query: 203 AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDA 262
A +F N++VKN +E D+ L+++F E+G S VM D +G S+ FGFVNFE ++A
Sbjct: 170 ARALEFTNIYVKNFEEDVDDQCLEELFSEFGKTLSVKVMVDENGHSRGFGFVNFEKHEEA 229
Query: 263 AKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDS 322
KAV ++NGK R YVG+AQK++ER+ ELK +FEQ +E V+++QG+NLY+KNL D
Sbjct: 230 QKAVNSMNGKALGGRVLYVGRAQKRTERQGELKRRFEQMKQERVNRYQGVNLYVKNLDDV 289
Query: 323 IDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPL 382
IDDEKL++ FS +G ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +KPL
Sbjct: 290 IDDEKLRKEFSPYGVITSAKVMTE-GGHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPL 348
Query: 383 YVAVAQRKEERRARLQAQFSQMRPVAM---GPSVP-PRMPMYPPGPSGLGQQFLYGQAPP 438
YVA+AQRKEER+A L Q+ Q V GP P P P P + Y +P
Sbjct: 349 YVALAQRKEERKAILTNQYMQRISVLRNINGPVFPQPTNYFLPAIPQSPTRASFY--SPS 406
Query: 439 AIIPPQMPPRGHAY-------------------------------RYP-LGRNMQDFPFD 466
+ P + PR +Y + P G +MQ +
Sbjct: 407 TMAPIRPAPRWTSYSPRSLCAFVVFLPATPRRSTSNISTVRQASTQVPRAGPHMQRV-VN 465
Query: 467 MGAGSM-LPVPVDMGAGIPRRDASVGQP---------------MPITALSTALANASPEQ 510
+G +M P G IP+ S P P+TA + LA+A P++
Sbjct: 466 IGTQTMGTGCPGSPGQAIPQYKYSSAMPNAHQVMERAVHIQGQEPLTA--SMLASAPPQE 523
Query: 511 QRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRS 569
Q+ +LG+ LYPL+ + A K+TGMLLE+D +E+L +LESPE+L +K+ EA+ L++
Sbjct: 524 QKQMLGDRLYPLIYGVHAQLAGKITGMLLEIDNSELLLMLESPESLHSKIEEAVAALQA 582
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 92/259 (35%), Positives = 144/259 (55%), Gaps = 24/259 (9%)
Query: 61 VCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMY----SHRDPSI--RK 114
VC + +R G+G+V++ A +A+ +N LN++ + + + R+ + R
Sbjct: 116 VCDENGSR---GFGFVHFETQEAANQAISTMNGMLLNDRKVFVGHFKSRQEREAELGARA 172
Query: 115 SGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNA 174
NI++KN ++ +D + L + FS FG LS K+ D +G S+GFGFV FE E AQ A
Sbjct: 173 LEFTNIYVKNFEEDVDDQCLEELFSEFGKTLSVKVMVDENGHSRGFGFVNFEKHEEAQKA 232
Query: 175 IDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFN-------------NVFVKNLDESTT 221
++ +NG + + ++VG ++ ER+ +K +F N++VKNLD+
Sbjct: 233 VNSMNGKALGGRVLYVGRAQKRTERQG-ELKRRFEQMKQERVNRYQGVNLYVKNLDDVID 291
Query: 222 DEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYV 281
DE L+K F YG ITSA VM +G G SK FGFV F + ++A KAV +NG+ + YV
Sbjct: 292 DEKLRKEFSPYGVITSAKVMTEG-GHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYV 350
Query: 282 GKAQKKSEREQELKGQFEQ 300
AQ+K ER+ L Q+ Q
Sbjct: 351 ALAQRKEERKAILTNQYMQ 369
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 107/201 (53%), Gaps = 26/201 (12%)
Query: 21 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYAN 80
GA +F T++YV + + +V D L +LFS+ G+ LSV+V D S G+G+VN+
Sbjct: 169 GARALEF--TNIYVKNFEEDVDDQCLEELFSEFGKTLSVKVMVD-ENGHSRGFGFVNFEK 225
Query: 81 PADAARALDVLNFTPLNNKSIRIMYSHR-------------------DPSIRKSGTGNIF 121
+A +A++ +N L R++Y R + + N++
Sbjct: 226 HEEAQKAVNSMNGKALGG---RVLYVGRAQKRTERQGELKRRFEQMKQERVNRYQGVNLY 282
Query: 122 IKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGM 181
+KNLD ID + L FS +G I S K+ T+G G SKGFGFV F + E A A+ ++NG
Sbjct: 283 VKNLDDVIDDEKLRKEFSPYGVITSAKVMTEG-GHSKGFGFVCFSSPEEATKAVTEMNGR 341
Query: 182 LINDKQVFVGHFLRKQERETV 202
+++ K ++V RK+ER+ +
Sbjct: 342 IVSTKPLYVALAQRKEERKAI 362
>gi|74137801|dbj|BAE24074.1| unnamed protein product [Mus musculus]
Length = 550
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 172/328 (52%), Positives = 231/328 (70%), Gaps = 26/328 (7%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKL 178
N+FIKNLDKSID+KAL+DTFS+FGNILSCK+ D +G SKG+ FV FE +E+A AI+K+
Sbjct: 1 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKM 59
Query: 179 NGMLINDKQVFVGHFLRKQERET-VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTIT 236
NG+L+ND++VFVG F ++ERE + K K F NV++KN E D +LK++F ++G
Sbjct: 60 NGLLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDGNLKELFSQFGKTL 119
Query: 237 SAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKG 296
S VMRD GKS+ FGFV++E +DA KAV+ +NGK+ + +VG+AQKK ER+ ELK
Sbjct: 120 SVKVMRDSSGKSRGFGFVSYEKHEDANKAVDEMNGKEMSGKAIFVGRAQKKVERQAELKR 179
Query: 297 QFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGF 356
+FEQ +E + ++QG+NLYIKNL D+IDDEKL++ FS FG+ITS KVM + G SKG GF
Sbjct: 180 KFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGF 238
Query: 357 VAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQF--------------- 401
V F + EEA++A+ EMNG+++ SKPLYVA+AQRKEER+A L Q+
Sbjct: 239 VCFPSREEATKAVTEMNGRIVGSKPLYVALAQRKEERKAHLTNQYMQHVAGLRALPAGAI 298
Query: 402 -SQMRPVAMG---PSVPP---RMPMYPP 422
+Q +P A G P VP R P Y P
Sbjct: 299 LNQFQPAAGGYFVPEVPQAQGRPPYYTP 326
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 104/289 (35%), Positives = 165/289 (57%), Gaps = 23/289 (7%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ +LD ++ + LYD FS G +LS +V D + S GY +V++ A +A++
Sbjct: 1 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYAFVHFETQEAADKAIEK 58
Query: 91 LNFTPLNNKSIRI-MYSHRDPSIRKSGT-----GNIFIKNLDKSIDHKALHDTFSSFGNI 144
+N LN++ + + + R + G N++IKN + +D L + FS FG
Sbjct: 59 MNGLLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDGNLKELFSQFGKT 118
Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAI 204
LS K+ D SG+S+GFGFV +E E A A+D++NG ++ K +FVG +K ER+ +
Sbjct: 119 LSVKVMRDSSGKSRGFGFVSYEKHEDANKAVDEMNGKEMSGKAIFVGRAQKKVERQ-AEL 177
Query: 205 KTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCF 251
K KF N+++KNLD++ DE L+K F +G+ITSA VM + DG+SK F
Sbjct: 178 KRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGF 236
Query: 252 GFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQ 300
GFV F + ++A KAV +NG+ + YV AQ+K ER+ L Q+ Q
Sbjct: 237 GFVCFPSREEATKAVTEMNGRIVGSKPLYVALAQRKEERKAHLTNQYMQ 285
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 110/196 (56%), Gaps = 20/196 (10%)
Query: 21 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYAN 80
GA +F T++Y+ + V D L +LFSQ G+ LSV+V RD S+ +S G+G+V+Y
Sbjct: 85 GAKAKEF--TNVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRD-SSGKSRGFGFVSYEK 141
Query: 81 PADAARALDVLNFTPLNNKSI----------------RIMYSHRDPSIRKSGTGNIFIKN 124
DA +A+D +N ++ K+I R + I + N++IKN
Sbjct: 142 HEDANKAVDEMNGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN 201
Query: 125 LDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLIN 184
LD +ID + L FS FG+I S K+ + G+SKGFGFV F ++E A A+ ++NG ++
Sbjct: 202 LDDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFPSREEATKAVTEMNGRIVG 260
Query: 185 DKQVFVGHFLRKQERE 200
K ++V RK+ER+
Sbjct: 261 SKPLYVALAQRKEERK 276
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 57/74 (77%), Gaps = 2/74 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A P++Q+ +LGE L+PL++ + + A K+TGMLLE+ +E+LH+LE+PE
Sbjct: 459 PLTA--SMLAAARPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIGNSELLHMLETPE 516
Query: 555 ALKAKVAEAMEVLR 568
+L +KV EA+ VL+
Sbjct: 517 SLCSKVDEAVAVLQ 530
>gi|6102944|emb|CAB59276.1| hypothetical protein [Homo sapiens]
Length = 367
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 182/365 (49%), Positives = 246/365 (67%), Gaps = 7/365 (1%)
Query: 28 LTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARA 87
L +LYVGDLD +VT+ LY F G + R+CRD TR LGYGYVN+ PADA A
Sbjct: 1 LKAALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWA 60
Query: 88 LDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSC 147
L+ +NF +N K R+M+S D +RKSG GNIFIKNLDKSID++AL FS+FGNILSC
Sbjct: 61 LNTMNFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSC 120
Query: 148 KIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK 207
K+ D +G SKG+ +V F++ +A AI +NG+ +N++QV+VG F +ER ++T+
Sbjct: 121 KVVCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEER-AAEVRTR 178
Query: 208 ----FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAA 263
F NVFVKN+ + DE LK++F EYG S V+RD GKSK FGFV +E + A
Sbjct: 179 DRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQ 238
Query: 264 KAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSI 323
KAV L+GK D + YVG+AQKK ER EL+ +FE+ + + G+ +YIKNL ++I
Sbjct: 239 KAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETI 298
Query: 324 DDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLY 383
+DEKLKE FS FG+I+ KVM + G KG G V FS+ EEA++A+ EMNG+++ SKPL+
Sbjct: 299 NDEKLKEEFSSFGSISRAKVMME-VGQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLH 357
Query: 384 VAVAQ 388
V + Q
Sbjct: 358 VTLGQ 362
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 107/302 (35%), Positives = 170/302 (56%), Gaps = 17/302 (5%)
Query: 120 IFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSK-GFGFVQFENKESAQNAIDKL 178
+++ +LD + L+ F G + +I D +S G+G+V F A+ A++ +
Sbjct: 5 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTM 64
Query: 179 NGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSA 238
N LIN K + Q + + K+ N+F+KNLD+S + L +F +G I S
Sbjct: 65 NFDLINGKPF---RLMWSQPDDRLR-KSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSC 120
Query: 239 VVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQF 298
V+ D +G SK + +V+F++ A +A+ +NG + ++R+ YVG+ + ER E++
Sbjct: 121 KVVCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVR--- 176
Query: 299 EQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVA 358
T D+ N+++KN+GD IDDEKLKELF E+G S KV+RD SG SKG GFV
Sbjct: 177 ------TRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVR 230
Query: 359 FSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMP 418
+ T E A +A+ +++GK I K LYV AQ+K ER A L+ +F ++ S PP +P
Sbjct: 231 YETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERL--RLKEKSRPPGVP 288
Query: 419 MY 420
+Y
Sbjct: 289 IY 290
>gi|13435438|gb|AAH04587.1| Pabpc1 protein [Mus musculus]
Length = 527
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 163/300 (54%), Positives = 219/300 (73%), Gaps = 4/300 (1%)
Query: 129 IDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQV 188
ID+KAL+DTFS+FGNILSCK+ D +G SKG+GFV FE +E+A+ AI+K+NGML+ND++V
Sbjct: 1 IDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKV 59
Query: 189 FVGHFLRKQERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDG 246
FVG F ++ERE A +F NV++KN E DE LK++FG++G S VM D G
Sbjct: 60 FVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESG 119
Query: 247 KSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETV 306
KSK FGFV+FE +DA KAV+ +NGK+ + ++ YVG+AQKK ER+ ELK +FEQ ++ +
Sbjct: 120 KSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRI 179
Query: 307 DKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEAS 366
++QG+NLY+KNL D IDDE+L++ FS FGTITS KVM + G SKG GFV FS+PEEA+
Sbjct: 180 TRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEAT 238
Query: 367 RALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSG 426
+A+ EMNG+++ +KPLYVA+AQRKEER+A L Q+ Q P P P PSG
Sbjct: 239 KAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSG 298
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 112/281 (39%), Positives = 162/281 (57%), Gaps = 23/281 (8%)
Query: 41 VTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKS 100
+ + LYD FS G +LS +V D + S GYG+V++ A RA++ +N LN++
Sbjct: 1 IDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRK 58
Query: 101 IRI----MYSHRDPSI--RKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGS 154
+ + R+ + R N++IKN + +D + L + F FG LS K+ TD S
Sbjct: 59 VFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDES 118
Query: 155 GQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFN----- 209
G+SKGFGFV FE E AQ A+D++NG +N KQ++VG +K ER+T +K KF
Sbjct: 119 GKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQT-ELKRKFEQMKQD 177
Query: 210 --------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADD 261
N++VKNLD+ DE L+K F +GTITSA VM +G G+SK FGFV F + ++
Sbjct: 178 RITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG-GRSKGFGFVCFSSPEE 236
Query: 262 AAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAM 302
A KAV +NG+ + YV AQ+K ER+ L Q+ Q M
Sbjct: 237 ATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRM 277
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 107/197 (54%), Gaps = 22/197 (11%)
Query: 21 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYAN 80
GA +F T++Y+ + ++ D +L +LF + G LSV+V D S +S G+G+V++
Sbjct: 75 GARAKEF--TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESG-KSKGFGFVSFER 131
Query: 81 PADAARALDVLNFTPLNNKSIRIMYSHR-----------------DPSIRKSGTGNIFIK 123
DA +A+D +N LN K I + + + D R G N+++K
Sbjct: 132 HEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGV-NLYVK 190
Query: 124 NLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLI 183
NLD ID + L FS FG I S K+ +G G+SKGFGFV F + E A A+ ++NG ++
Sbjct: 191 NLDDGIDDERLRKEFSPFGTITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTEMNGRIV 249
Query: 184 NDKQVFVGHFLRKQERE 200
K ++V RK+ER+
Sbjct: 250 ATKPLYVALAQRKEERQ 266
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 435 PLTA--SMLAFAPPQEQKQMLGERLFPLIQAMHPSLAGKITGMLLEIDNSELLHMLESPE 492
Query: 555 ALKAKVAEAMEVLRSVAQQQA 575
+L++KV EA+ VL++ ++A
Sbjct: 493 SLRSKVDEAVAVLQAHQAKEA 513
>gi|160333518|ref|NP_001103836.1| poly A binding protein, cytoplasmic 5 [Rattus norvegicus]
gi|149055477|gb|EDM07061.1| rCG38154 [Rattus norvegicus]
Length = 382
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 179/362 (49%), Positives = 240/362 (66%), Gaps = 7/362 (1%)
Query: 34 VGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNF 93
VGDLD +VT+ LY F G + R+CRD TR LGYGYVN+ PADA AL+ +NF
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 94 TPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG 153
+N K R+M+S D +RKSG GNIFIKNLDKSID++AL FS+FGNILSCK+ D
Sbjct: 82 DLINGKPFRLMWSQPDDHLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDD 141
Query: 154 SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK----FN 209
+G SKG+ +V F++ +A AI +NG+ +N++QV+VG F +ER ++T+ F
Sbjct: 142 NG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEER-AAEVRTRDRATFT 199
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEAL 269
NVFVKN + DE LKK+F EYG S V+RD GKSK FGFV +E + A KAV L
Sbjct: 200 NVFVKNFGDDIDDEKLKKLFSEYGPTESVKVIRDATGKSKGFGFVRYETHEAAQKAVLEL 259
Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLK 329
+GK D + VG+AQKK ER EL+ +FE+ + + G+ +YIKNL ++I+DEKLK
Sbjct: 260 HGKSIDGKVLCVGRAQKKIERLAELRRRFERLKLKDKTRPPGVPIYIKNLDETINDEKLK 319
Query: 330 ELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQR 389
E FS FG+I+ KVM + G KG G V FS+ EEAS+A+ EMNG+++ SK L+V + Q
Sbjct: 320 EEFSLFGSISRAKVMME-VGQGKGFGVVCFSSFEEASKAVNEMNGRVVGSKTLHVTLGQA 378
Query: 390 KE 391
+
Sbjct: 379 RH 380
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 105/300 (35%), Positives = 168/300 (56%), Gaps = 17/300 (5%)
Query: 122 IKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSK-GFGFVQFENKESAQNAIDKLNG 180
+ +LD + L+ F G + +I D +S G+G+V F A+ A++ +N
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 181 MLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVV 240
LIN K + Q + + K+ N+F+KNLD+S + L +F +G I S V
Sbjct: 82 DLINGKPF---RLMWSQPDDHLR-KSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKV 137
Query: 241 MRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQ 300
+ D +G SK + +V+F++ A +A+ +NG + ++R+ YVG+ + ER E++
Sbjct: 138 VCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVR----- 191
Query: 301 AMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFS 360
T D+ N+++KN GD IDDEKLK+LFSE+G S KV+RD +G SKG GFV +
Sbjct: 192 ----TRDRATFTNVFVKNFGDDIDDEKLKKLFSEYGPTESVKVIRDATGKSKGFGFVRYE 247
Query: 361 TPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMY 420
T E A +A+ E++GK I K L V AQ+K ER A L+ +F +++ + PP +P+Y
Sbjct: 248 THEAAQKAVLELHGKSIDGKVLCVGRAQKKIERLAELRRRFERLK--LKDKTRPPGVPIY 305
>gi|395856757|ref|XP_003800785.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Otolemur garnettii]
Length = 359
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 177/382 (46%), Positives = 243/382 (63%), Gaps = 36/382 (9%)
Query: 26 QFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAA 85
++ SLYVGDL +VT+ L+ FS VG VLS+R+CRDL TRRSLGY YVN+ ADA
Sbjct: 6 KYRMASLYVGDLHADVTEDLLFKKFSTVGPVLSIRICRDLVTRRSLGYAYVNFLQLADAQ 65
Query: 86 RALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNIL 145
+ALD +NF +N KSIR+M+S RD +R+SG GN+
Sbjct: 66 KALDTMNFDVVNGKSIRLMWSQRDAYLRRSGIGNVM------------------------ 101
Query: 146 SCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIK 205
+D G SKG+ FV F+N+ +A AI+++NG + D +VFVG F +++RE ++
Sbjct: 102 -----SDDQG-SKGYAFVHFQNQSAADRAIEEMNGRQLKDCKVFVGRFKNRKDREA-ELR 154
Query: 206 TK---FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDA 262
K F NV++KN E DE LK++F +YG S VM D GKSK FGFV+F+N + A
Sbjct: 155 NKAGEFTNVYIKNFGEDMDDEKLKEVFSKYGRTLSVKVMTDSSGKSKGFGFVSFDNHEAA 214
Query: 263 AKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDS 322
KAV+ +NGK + + +VG+AQKK ER+ ELK FEQ KE + QG+ LYIKNL D+
Sbjct: 215 KKAVKEMNGKDINGQLIFVGRAQKKVERQAELKQMFEQLKKERIHGCQGVKLYIKNLDDT 274
Query: 323 IDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPL 382
IDDEKL++ FS FG+I+ KVM++ G SKG G + FS+ EEA++A+ EMNG ++ SKPL
Sbjct: 275 IDDEKLRKEFSSFGSISRVKVMQE-GGQSKGFGLICFSSLEEATKAMTEMNGHILGSKPL 333
Query: 383 YVAVAQRK-EERRARLQAQFSQ 403
+A+A R ER+ L Q+ Q
Sbjct: 334 SIALAHRHYXERKIYLTRQYLQ 355
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 96/292 (32%), Positives = 151/292 (51%), Gaps = 51/292 (17%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATD-GSGQSKGFGFVQFENKESAQNAIDK 177
++++ +L + L FS+ G +LS +I D + +S G+ +V F AQ A+D
Sbjct: 11 SLYVGDLHADVTEDLLFKKFSTVGPVLSIRICRDLVTRRSLGYAYVNFLQLADAQKALDT 70
Query: 178 LNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITS 237
+N ++N K + L +R+ ++ NV
Sbjct: 71 MNFDVVNGKSIR----LMWSQRDAYLRRSGIGNV-------------------------- 100
Query: 238 AVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELK-- 295
M D G SK + FV+F+N A +A+E +NG++ D + +VG+ + + +RE EL+
Sbjct: 101 ---MSDDQG-SKGYAFVHFQNQSAADRAIEEMNGRQLKDCKVFVGRFKNRKDREAELRNK 156
Query: 296 -GQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGS 354
G+F N+YIKN G+ +DDEKLKE+FS++G S KVM D SG SKG
Sbjct: 157 AGEFT-------------NVYIKNFGEDMDDEKLKEVFSKYGRTLSVKVMTDSSGKSKGF 203
Query: 355 GFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRP 406
GFV+F E A +A+ EMNGK I + ++V AQ+K ER+A L+ F Q++
Sbjct: 204 GFVSFDNHEAAKKAVKEMNGKDINGQLIFVGRAQKKVERQAELKQMFEQLKK 255
>gi|29336045|ref|NP_444344.1| polyadenylate-binding protein 5 [Mus musculus]
gi|26341316|dbj|BAC34320.1| unnamed protein product [Mus musculus]
gi|76827669|gb|AAI07363.1| Poly(A) binding protein, cytoplasmic 5 [Mus musculus]
gi|76828194|gb|AAI07364.1| Poly(A) binding protein, cytoplasmic 5 [Mus musculus]
gi|148701502|gb|EDL33449.1| poly A binding protein, cytoplasmic 5 [Mus musculus]
Length = 381
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 177/359 (49%), Positives = 238/359 (66%), Gaps = 7/359 (1%)
Query: 34 VGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNF 93
VGDLD +VT+ LY F G + R+CRD TR LGYGYVN+ PADA AL+ +NF
Sbjct: 21 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 80
Query: 94 TPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG 153
+N K R+M+S D +RKSG GNIFIKNLDK+ID++AL FS+FGNILSCK+ D
Sbjct: 81 DLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKTIDNRALFYLFSAFGNILSCKVVCDD 140
Query: 154 SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK----FN 209
+G SKG+ +V F++ +A AI +NG+ +N++QV+VG F +ER ++T+ F
Sbjct: 141 NG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEER-AAEVRTRERATFT 198
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEAL 269
NVFVKN + DE L K+F EYG S V+RD GKSK FGFV +E + A KAV L
Sbjct: 199 NVFVKNFGDDIDDEKLNKLFSEYGPTESVKVIRDATGKSKGFGFVRYETHEAAQKAVLEL 258
Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLK 329
+GK D + VG+AQKK ER EL+ +FE+ + ++ G+ +YIKNL ++I+DEKLK
Sbjct: 259 HGKSIDGKVLCVGRAQKKIERLAELRRRFERLKLKEKNRPSGVPIYIKNLDETINDEKLK 318
Query: 330 ELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
E FS FG+I+ KVM + G KG G V FS+ EEA +A+ EMNG++I SK L+V + Q
Sbjct: 319 EEFSSFGSISRAKVMME-VGQGKGFGVVCFSSFEEACKAVDEMNGRIIGSKTLHVTLGQ 376
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 101/300 (33%), Positives = 166/300 (55%), Gaps = 17/300 (5%)
Query: 122 IKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSK-GFGFVQFENKESAQNAIDKLNG 180
+ +LD + L+ F G + +I D +S G+G+V F A+ A++ +N
Sbjct: 21 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 80
Query: 181 MLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVV 240
LIN K + Q + + K+ N+F+KNLD++ + L +F +G I S V
Sbjct: 81 DLINGKPF---RLMWSQPDDRLR-KSGVGNIFIKNLDKTIDNRALFYLFSAFGNILSCKV 136
Query: 241 MRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQ 300
+ D +G SK + +V+F++ A +A+ +NG + ++R+ YVG+ + ER E++
Sbjct: 137 VCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVR----- 190
Query: 301 AMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFS 360
T ++ N+++KN GD IDDEKL +LFSE+G S KV+RD +G SKG GFV +
Sbjct: 191 ----TRERATFTNVFVKNFGDDIDDEKLNKLFSEYGPTESVKVIRDATGKSKGFGFVRYE 246
Query: 361 TPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMY 420
T E A +A+ E++GK I K L V AQ+K ER A L+ +F +++ + P +P+Y
Sbjct: 247 THEAAQKAVLELHGKSIDGKVLCVGRAQKKIERLAELRRRFERLK--LKEKNRPSGVPIY 304
>gi|29841435|gb|AAP06467.1| similar to GenBank Accession Number AJ298278 poly(A) binding
protein in Rattus norvegicus [Schistosoma japonicum]
Length = 307
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 157/287 (54%), Positives = 208/287 (72%)
Query: 18 VAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVN 77
+A + + +SLYVGDL V+DS L FS++G VLS RVCRDL+TR+SLGYGYVN
Sbjct: 1 MAVTVASQGLMNSSLYVGDLHPRVSDSALQAKFSEIGPVLSARVCRDLATRQSLGYGYVN 60
Query: 78 YANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDT 137
+ +P A +AL+VLN+ PL + IRIM+S RDPS+RKSG GNIFIKNLDKSI+ K L+DT
Sbjct: 61 FEDPKHAEQALEVLNYEPLMGRPIRIMWSQRDPSLRKSGKGNIFIKNLDKSIEQKELYDT 120
Query: 138 FSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQ 197
FS FG ILSCKI D +GQSKG+GFV FE +E A+ AI+K+N M+I D+ V+VG F+ K
Sbjct: 121 FSFFGRILSCKIVMDENGQSKGYGFVHFEKEECAERAIEKINNMIIRDRVVYVGKFIPKT 180
Query: 198 ERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFE 257
ER++ A K KFNN++VKN T +E LK++F E+G I SA VM+D +GKSK FGFV +
Sbjct: 181 ERKSQARKVKFNNLYVKNFPPETDNEKLKEMFSEFGEIKSACVMKDNEGKSKGFGFVCYL 240
Query: 258 NADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKE 304
+ D A AV ++GK+ + R Y +AQ+K ER++ELK + E+ E
Sbjct: 241 DPDHAENAVRTMHGKEIEGRVLYCARAQRKEERQEELKQKIEKQRAE 287
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 106/290 (36%), Positives = 163/290 (56%), Gaps = 21/290 (7%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATD-GSGQSKGFGFVQFENKESAQNAIDK 177
++++ +L + AL FS G +LS ++ D + QS G+G+V FE+ + A+ A++
Sbjct: 14 SLYVGDLHPRVSDSALQAKFSEIGPVLSARVCRDLATRQSLGYGYVNFEDPKHAEQALEV 73
Query: 178 LNGMLINDKQVFVGHFLR--KQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTI 235
LN + +G +R +R+ K+ N+F+KNLD+S ++L F +G I
Sbjct: 74 LN------YEPLMGRPIRIMWSQRDPSLRKSGKGNIFIKNLDKSIEQKELYDTFSFFGRI 127
Query: 236 TSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELK 295
S ++ D +G+SK +GFV+FE + A +A+E +N DR YVGK K+ER+ + +
Sbjct: 128 LSCKIVMDENGQSKGYGFVHFEKEECAERAIEKINNMIIRDRVVYVGKFIPKTERKSQAR 187
Query: 296 GQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSG 355
K + NLY+KN D+EKLKE+FSEFG I S VM+D G SKG G
Sbjct: 188 ------------KVKFNNLYVKNFPPETDNEKLKEMFSEFGEIKSACVMKDNEGKSKGFG 235
Query: 356 FVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
FV + P+ A A+ M+GK I + LY A AQRKEER+ L+ + + R
Sbjct: 236 FVCYLDPDHAENAVRTMHGKEIEGRVLYCARAQRKEERQEELKQKIEKQR 285
>gi|380503877|ref|NP_001244114.1| polyadenylate-binding protein 5 [Equus caballus]
Length = 382
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 181/359 (50%), Positives = 242/359 (67%), Gaps = 7/359 (1%)
Query: 34 VGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNF 93
VGDLD +VT+ LY F G + R+CRD TR LGYGYVN+ PADA AL+ +NF
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 94 TPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG 153
+N K R+M+S D +RKSG GNIFIKNLDKSID++AL FS+FGNILSCK+ D
Sbjct: 82 DLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDD 141
Query: 154 SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK----FN 209
+G SKG+ +V F++ +A AI +NG+ +N++QV+VG F +ER ++T+ F
Sbjct: 142 NG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEER-AAEVRTRDRATFT 199
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEAL 269
NVFVKN + DE LK+IF EYG+ S V+RD GKSK FGFV +E + A KAV L
Sbjct: 200 NVFVKNFGDDMDDEKLKEIFSEYGSTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDL 259
Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLK 329
+GK D + YVG+AQKK ER EL+ +FE+ + + G+ +YIKNL ++IDDEKLK
Sbjct: 260 HGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRAPGVPIYIKNLDETIDDEKLK 319
Query: 330 ELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
E FS FG+I+ KVM + G KG G V FS+ EEA++A+ EMNG+++ SKPL+V + Q
Sbjct: 320 EEFSSFGSISRAKVMVE-VGQGKGFGVVCFSSFEEATKAVDEMNGRIMGSKPLHVTLGQ 377
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/275 (36%), Positives = 156/275 (56%), Gaps = 15/275 (5%)
Query: 122 IKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSK-GFGFVQFENKESAQNAIDKLNG 180
+ +LD + L+ F G + +I D +S G+G+V F A+ A++ +N
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 181 MLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVV 240
LIN K + Q + + K+ N+F+KNLD+S + L +F +G I S V
Sbjct: 82 DLINGKPF---RLMWSQPDDRLR-KSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKV 137
Query: 241 MRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQ 300
+ D +G SK + +V+F++ A +A+ +NG + ++R+ YVG+ + ER E++
Sbjct: 138 VCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVR----- 191
Query: 301 AMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFS 360
T D+ N+++KN GD +DDEKLKE+FSE+G+ S KV+RD SG SKG GFV +
Sbjct: 192 ----TRDRATFTNVFVKNFGDDMDDEKLKEIFSEYGSTESVKVIRDASGKSKGFGFVRYE 247
Query: 361 TPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRA 395
T E A +A+ +++GK I K LYV AQ+K ER A
Sbjct: 248 THEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLA 282
>gi|351705901|gb|EHB08820.1| Polyadenylate-binding protein 5 [Heterocephalus glaber]
Length = 382
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 181/359 (50%), Positives = 241/359 (67%), Gaps = 7/359 (1%)
Query: 34 VGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNF 93
VGDLD +VT+ LY F G + R+CRD TR LGYGYVN+ PADA AL+ +NF
Sbjct: 22 VGDLDADVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 94 TPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG 153
+N K R+M+S D +RKSG GNIFIKNLDKSID++ L FS+FGNILSCK+ D
Sbjct: 82 DLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRGLFYLFSAFGNILSCKVVCDD 141
Query: 154 SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK----FN 209
+G SKG+ +V F++ +A AI +NG+ +N++QV+VG F +ER ++T+ F
Sbjct: 142 NG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEER-AAEVRTRDRATFT 199
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEAL 269
NVFVKNL + DE LK++F EYG I S V+RD GKSK FGFV +E + A KAV L
Sbjct: 200 NVFVKNLGDDMNDEKLKELFSEYGQIESVKVVRDASGKSKGFGFVKYETHEAAQKAVLEL 259
Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLK 329
+GK D + YVG+AQKK ER EL+ +FE+ + + G+ +YIKNL +SIDDEKLK
Sbjct: 260 HGKSMDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDESIDDEKLK 319
Query: 330 ELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
E FS FG+I+ KVM + G KG G V FS+ EEA++A+ EMNG+++ SK L+V + Q
Sbjct: 320 EEFSSFGSISRAKVMME-VGQGKGFGVVCFSSFEEATKAVDEMNGRLVGSKALHVTLGQ 377
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 108/300 (36%), Positives = 170/300 (56%), Gaps = 17/300 (5%)
Query: 122 IKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSK-GFGFVQFENKESAQNAIDKLNG 180
+ +LD + L+ F G + +I D +S G+G+V F A+ A++ +N
Sbjct: 22 VGDLDADVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 181 MLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVV 240
LIN K + Q + + K+ N+F+KNLD+S + L +F +G I S V
Sbjct: 82 DLINGKPF---RLMWSQPDDRLR-KSGVGNIFIKNLDKSIDNRGLFYLFSAFGNILSCKV 137
Query: 241 MRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQ 300
+ D +G SK + +V+F++ A +A+ +NG + ++R+ YVG+ + ER E++
Sbjct: 138 VCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVR----- 191
Query: 301 AMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFS 360
T D+ N+++KNLGD ++DEKLKELFSE+G I S KV+RD SG SKG GFV +
Sbjct: 192 ----TRDRATFTNVFVKNLGDDMNDEKLKELFSEYGQIESVKVVRDASGKSKGFGFVKYE 247
Query: 361 TPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMY 420
T E A +A+ E++GK + K LYV AQ+K ER A L+ +F ++ S PP +P+Y
Sbjct: 248 THEAAQKAVLELHGKSMDGKVLYVGRAQKKIERLAELRRRFERL--RLKEKSRPPGVPIY 305
>gi|291407988|ref|XP_002720199.1| PREDICTED: poly(A) binding protein, cytoplasmic 5 [Oryctolagus
cuniculus]
Length = 382
Score = 324 bits (830), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 180/359 (50%), Positives = 240/359 (66%), Gaps = 7/359 (1%)
Query: 34 VGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNF 93
VGDLD +VT+ LY F G + R+CRD TR LGYGYVN+ PADA AL+ +NF
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 94 TPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG 153
+N K R+M+S D +RKSG GNIFIKNLDKSID++AL FS+FGNILSCK+ +D
Sbjct: 82 DLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVSDD 141
Query: 154 SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK----FN 209
G SKG+ +V F++ +A AI +NG+ +N++QV+VG F +ER ++T+ F
Sbjct: 142 HG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEER-AAEVRTRDRATFT 199
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEAL 269
NVFVKN + DE LK++F EYG S V+RD GKSK FGFV +E + A KAV L
Sbjct: 200 NVFVKNFGDDMDDEKLKELFSEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDL 259
Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLK 329
+GK D + YVG+AQKK ER EL+ +FE+ + + G+ +YIKNL +SI DEKLK
Sbjct: 260 HGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDESISDEKLK 319
Query: 330 ELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
E FS FG+I+ KVM + G KG G V FS+ EEA++A+ EMNG+++ SKPL+V + Q
Sbjct: 320 EEFSSFGSISRAKVMME-VGHGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLGQ 377
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 107/300 (35%), Positives = 167/300 (55%), Gaps = 17/300 (5%)
Query: 122 IKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSK-GFGFVQFENKESAQNAIDKLNG 180
+ +LD + L+ F G + +I D +S G+G+V F A+ A++ +N
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 181 MLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVV 240
LIN K + Q + + K+ N+F+KNLD+S + L +F +G I S V
Sbjct: 82 DLINGKPF---RLMWSQPDDRLR-KSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKV 137
Query: 241 MRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQ 300
+ D G SK + +V+F++ A +A+ +NG + ++R+ YVG+ + ER E++
Sbjct: 138 VSDDHG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVR----- 191
Query: 301 AMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFS 360
T D+ N+++KN GD +DDEKLKELFSE+G S KV+RD SG SKG GFV +
Sbjct: 192 ----TRDRATFTNVFVKNFGDDMDDEKLKELFSEYGPTESVKVIRDASGKSKGFGFVRYE 247
Query: 361 TPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMY 420
T E A +A+ +++GK I K LYV AQ+K ER A L+ +F ++ S PP +P+Y
Sbjct: 248 THEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERL--RLKEKSRPPGVPIY 305
>gi|154338582|ref|XP_001565513.1| putative poly(A)-binding protein 3 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134062565|emb|CAM39007.1| putative poly(A)-binding protein 3 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 552
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 218/580 (37%), Positives = 320/580 (55%), Gaps = 67/580 (11%)
Query: 30 TSLYVGDL--DFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARA 87
TS++VGDL D + + +LFS + V+SV+VCRD++T+RSLGYGYVN+ ADA +
Sbjct: 8 TSVFVGDLPVDLPRPEEAINNLFSSIAPVVSVKVCRDIATQRSLGYGYVNFQTTADAEKV 67
Query: 88 LDVLNFTPLN-NKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
+D LNFT + + IR+M++ RDP RKSG NIF+K LD ++ KAL FS G +LS
Sbjct: 68 IDALNFTGIAPGRYIRVMFAIRDPLQRKSGANNIFVKKLDAAVSAKALQAAFSRCGRVLS 127
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKT 206
CK+A D G SKG+GFVQFE + A+ A+D +NG + D +V V F+R+ +RE +A K+
Sbjct: 128 CKVALDSEGHSKGYGFVQFETADGAKAALD-MNGAKVGDSEVEVAPFVRRVDREAMAAKS 186
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
F N+++KN+ + T+ D++ ++G +TS + +K F FE + A KA+
Sbjct: 187 -FRNIYIKNIKATATEVDMRTTLEKFGKVTSLFLAEHAPFLTK-FALAVFEEHEAAVKAI 244
Query: 267 EALN-----GKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQ--GLNLYIKNL 319
LN G + + V +A KSER++E K+T +Q G NLY+K+L
Sbjct: 245 AELNESEESGLTEEAVKLVVCRALSKSERDRE--------RKKTASLYQNHGRNLYVKHL 296
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
D I D+KL+E+F+ FG ITSC +MR+ +G +G FV F + A+ A+ E+NG+ + S
Sbjct: 297 PDDITDDKLREIFAPFGKITSCAIMRESNGSLRGFAFVCFEDKQHATAAMRELNGRSLES 356
Query: 380 --KPLYVAVAQRK-------EERRARLQAQFSQMRPVAMGPSVPPRMPMYP--------- 421
KPLYV+ A++K ++RRA ++ Q P+ P PR P +P
Sbjct: 357 SKKPLYVSQAEQKDMRIRLLQQRRAAMRHQTRMAPPMNTFPQQWPRQP-FPHMVQPMMLP 415
Query: 422 -PGPSGLGQQFLYGQAPPAIIPPQM---PPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPV 477
P P+ QF+ G P + P M P +G R P N +P +
Sbjct: 416 PPPPNMGMPQFMSG---PMMRRPVMDAHPRQGEPMRPP---NRYTYPREQYQPQP----Q 465
Query: 478 DMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGM 537
PR+D + + L+T SPEQQ+ LGE LY + +E AAK+TGM
Sbjct: 466 PQPQPQPRQDG-----IDVNYLNT----LSPEQQKNYLGELLYSRIMPVESFNAAKITGM 516
Query: 538 LLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANN 577
LLEM + E+ +L AL AK+ EA VL QQ + N
Sbjct: 517 LLEMSREEIFEVLRDHFALLAKIQEANAVL----QQHSGN 552
>gi|296235923|ref|XP_002763106.1| PREDICTED: polyadenylate-binding protein 5 [Callithrix jacchus]
gi|14571652|emb|CAC42812.1| Poly(A)-binding protein cytoplasmic 5 [Callithrix jacchus]
Length = 382
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 180/359 (50%), Positives = 242/359 (67%), Gaps = 7/359 (1%)
Query: 34 VGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNF 93
VGDLD +VT+ LY F G + R+CRD TR LGYGYVN+ PADA AL+ +NF
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 94 TPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG 153
+N K R+M+S D +RKSG GNIFIKNLDKSID++AL FS+FGNILSCK+ D
Sbjct: 82 DLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDD 141
Query: 154 SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK----FN 209
+G SKG+ +V F++ +A AI +NG+ +N++QV+VG F +ER ++T+ F
Sbjct: 142 NG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEER-AAEVRTRDRATFT 199
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEAL 269
NVFVKN+ E DE LK++F EYG S V+RD GKSK FGFV +E + A KAV L
Sbjct: 200 NVFVKNIGEDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDL 259
Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLK 329
+GK D + YVG+AQKK ER EL+ +FE+ + + G+ +YIKNL ++I+DEKLK
Sbjct: 260 HGKSVDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLK 319
Query: 330 ELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
E FS FG+I+ KVM + G KG G V FS+ EEA++A+ EMNG+++ SKPL+V + Q
Sbjct: 320 EEFSSFGSISRAKVMME-VGQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLGQ 377
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/300 (35%), Positives = 168/300 (56%), Gaps = 17/300 (5%)
Query: 122 IKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSK-GFGFVQFENKESAQNAIDKLNG 180
+ +LD + L+ F G + +I D +S G+G+V F A+ A++ +N
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 181 MLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVV 240
LIN K + Q + + K+ N+F+KNLD+S + L +F +G I S V
Sbjct: 82 DLINGKPF---RLMWSQPDDRLR-KSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKV 137
Query: 241 MRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQ 300
+ D +G SK + +V+F++ A +A+ +NG + ++R+ YVG+ + ER E++
Sbjct: 138 VCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVR----- 191
Query: 301 AMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFS 360
T D+ N+++KN+G+ IDDEKLKELF E+G S KV+RD SG SKG GFV +
Sbjct: 192 ----TRDRATFTNVFVKNIGEDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYE 247
Query: 361 TPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMY 420
T E A +A+ +++GK + K LYV AQ+K ER A L+ +F ++ S PP +P+Y
Sbjct: 248 THEAAQKAVLDLHGKSVDGKVLYVGRAQKKIERLAELRRRFERL--RLKEKSRPPGVPIY 305
>gi|15228191|ref|NP_188259.1| poly(A) binding protein 6 [Arabidopsis thaliana]
gi|2062166|gb|AAB63640.1| poly(A)-binding protein isolog [Arabidopsis thaliana]
gi|9279720|dbj|BAB01277.1| poly(A) binding protein-like [Arabidopsis thaliana]
gi|332642284|gb|AEE75805.1| poly(A) binding protein 6 [Arabidopsis thaliana]
Length = 537
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 180/413 (43%), Positives = 259/413 (62%), Gaps = 9/413 (2%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL +VT+ L D FS V+SV +CR+ T +S+ Y Y+N+ +P A+ A+
Sbjct: 22 SLYVGDLSPDVTEKDLIDKFSLNVPVVSVHLCRNSVTGKSMCYAYINFDSPFSASNAMTR 81
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRK---SGTGNIFIKNLDKSIDHKALHDTFSSFGNILSC 147
LN + L K++RIM+S RD + R+ +G N+++KNLD SI L F FG+ILSC
Sbjct: 82 LNHSDLKGKAMRIMWSQRDLAYRRRTRTGFANLYVKNLDSSITSSCLERMFCPFGSILSC 141
Query: 148 KIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK 207
K+ + +GQSKGFGFVQF+ ++SA +A L+G ++ K++FV F+ K ER +A
Sbjct: 142 KVVEE-NGQSKGFGFVQFDTEQSAVSARSALHGSMVYGKKLFVAKFINKDERAAMAGNQD 200
Query: 208 FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVE 267
NV+VKNL E+ TD+ L +F +YGT++S VVMRDG G+S+ FGFVNF N ++A KA+E
Sbjct: 201 STNVYVKNLIETVTDDCLHTLFSQYGTVSSVVVMRDGMGRSRGFGFVNFCNPENAKKAME 260
Query: 268 ALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEK 327
+L G + ++ +VGKA KK ER + LK +F + + NLY+KNL +S+++ +
Sbjct: 261 SLCGLQLGSKKLFVGKALKKDERREMLKQKFSDNFIAKPN-MRWSNLYVKNLSESMNETR 319
Query: 328 LKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 387
L+E+F +G I S KVM +G SKG GFV FS EE+ +A +NG ++ KP+ V VA
Sbjct: 320 LREIFGCYGQIVSAKVMCHENGRSKGFGFVCFSNCEESKQAKRYLNGFLVDGKPIVVRVA 379
Query: 388 QRKEERRARLQAQF-SQMRPVAMGPSVP-PRMPM--YPPGPSGLGQQFLYGQA 436
+RKE+R RLQ F +Q R PS P P P+ Y G Q F G +
Sbjct: 380 ERKEDRIKRLQQYFQAQPRQYTQAPSAPSPAQPVLSYVSSSYGCFQPFQVGTS 432
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 110/198 (55%), Gaps = 23/198 (11%)
Query: 20 AGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYA 79
A +GNQ +T++YV +L VTD L+ LFSQ G V SV V RD RS G+G+VN+
Sbjct: 193 AAMAGNQ-DSTNVYVKNLIETVTDDCLHTLFSQYGTVSSVVVMRD-GMGRSRGFGFVNFC 250
Query: 80 NPADAARALDVLNFTPLNNKSI-----------RIMYSHR-------DPSIRKSGTGNIF 121
NP +A +A++ L L +K + R M + P++R S N++
Sbjct: 251 NPENAKKAMESLCGLQLGSKKLFVGKALKKDERREMLKQKFSDNFIAKPNMRWS---NLY 307
Query: 122 IKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGM 181
+KNL +S++ L + F +G I+S K+ +G+SKGFGFV F N E ++ A LNG
Sbjct: 308 VKNLSESMNETRLREIFGCYGQIVSAKVMCHENGRSKGFGFVCFSNCEESKQAKRYLNGF 367
Query: 182 LINDKQVFVGHFLRKQER 199
L++ K + V RK++R
Sbjct: 368 LVDGKPIVVRVAERKEDR 385
>gi|444732647|gb|ELW72929.1| Polyadenylate-binding protein 5 [Tupaia chinensis]
Length = 382
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 180/359 (50%), Positives = 241/359 (67%), Gaps = 7/359 (1%)
Query: 34 VGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNF 93
VGDLD +VT+ LY F G + R+CRD TR LGYGYVN+ PADA AL+ +NF
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 94 TPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG 153
+N K R+M+S D +RKSG GNIFIKNLDKSID++AL FS+FGNILSCK+ D
Sbjct: 82 DLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDD 141
Query: 154 SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK----FN 209
+G SKG+ +V F++ +A AI +NG+ +N++QV+VG F +ER ++T+ F
Sbjct: 142 NG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEER-AAEVRTRDRATFT 199
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEAL 269
NVFVKN + DE LK++F EYG S V+RD GKSK FGFV +E + A KAV L
Sbjct: 200 NVFVKNFGDDMDDEKLKELFSEYGPTESVKVIRDAGGKSKGFGFVRYETHEAAQKAVLDL 259
Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLK 329
+GK D + YVG+AQKK ER EL+ +FE+ + + G+ +YIKNL ++IDDEKLK
Sbjct: 260 HGKSMDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETIDDEKLK 319
Query: 330 ELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
E FS FG+I+ KVM + G KG G V FS+ EEA++A+ EMNG+++ SKPL+V + Q
Sbjct: 320 EEFSSFGSISRAKVMME-VGQGKGFGVVCFSSFEEATKAVDEMNGRVVGSKPLHVTLGQ 377
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 105/300 (35%), Positives = 167/300 (55%), Gaps = 17/300 (5%)
Query: 122 IKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSK-GFGFVQFENKESAQNAIDKLNG 180
+ +LD + L+ F G + +I D +S G+G+V F A+ A++ +N
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 181 MLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVV 240
LIN K + Q + + K+ N+F+KNLD+S + L +F +G I S V
Sbjct: 82 DLINGKPF---RLMWSQPDDRLR-KSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKV 137
Query: 241 MRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQ 300
+ D +G SK + +V+F++ A +A+ +NG + ++R+ YVG+ + ER E++
Sbjct: 138 VCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVR----- 191
Query: 301 AMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFS 360
T D+ N+++KN GD +DDEKLKELFSE+G S KV+RD G SKG GFV +
Sbjct: 192 ----TRDRATFTNVFVKNFGDDMDDEKLKELFSEYGPTESVKVIRDAGGKSKGFGFVRYE 247
Query: 361 TPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMY 420
T E A +A+ +++GK + K LYV AQ+K ER A L+ +F ++ S PP +P+Y
Sbjct: 248 THEAAQKAVLDLHGKSMDGKVLYVGRAQKKIERLAELRRRFERL--RLKEKSRPPGVPIY 305
>gi|397478151|ref|XP_003810419.1| PREDICTED: polyadenylate-binding protein 5-like [Pan paniscus]
Length = 382
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 180/359 (50%), Positives = 242/359 (67%), Gaps = 7/359 (1%)
Query: 34 VGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNF 93
VGDLD +VT+ LY F G + R+CRD TR LGYGYVN+ PADA AL+ +NF
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 94 TPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG 153
+N K R+M+S D +RKSG GNIFIKNLDKSID++AL FS+FGNILSCK+ D
Sbjct: 82 DLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDD 141
Query: 154 SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK----FN 209
+G SKG+ +V F++ +A AI +NG+ +N++QV+VG F +ER ++T+ F
Sbjct: 142 NG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEER-AAEVRTRDRATFT 199
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEAL 269
NVFVKN+ + DE LK++F EYG S V+RD GKSK FGFV +E + A KAV L
Sbjct: 200 NVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDL 259
Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLK 329
+GK D + YVG+AQKK ER EL+ +FE+ + + G+ +YIKNL ++I+DEKLK
Sbjct: 260 HGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLK 319
Query: 330 ELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
E FS FG+I+ KVM + G KG G V FS+ EEAS+A+ EMNG+++ SKPL+V + Q
Sbjct: 320 EEFSSFGSISRAKVMME-VGQGKGFGVVCFSSFEEASKAVDEMNGRIVGSKPLHVTLGQ 377
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 107/300 (35%), Positives = 168/300 (56%), Gaps = 17/300 (5%)
Query: 122 IKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSK-GFGFVQFENKESAQNAIDKLNG 180
+ +LD + L+ F G + +I D +S G+G+V F A+ A++ +N
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 181 MLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVV 240
LIN K + Q + + K+ N+F+KNLD+S + L +F +G I S V
Sbjct: 82 DLINGKPF---RLMWSQPDDRLR-KSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKV 137
Query: 241 MRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQ 300
+ D +G SK + +V+F++ A +A+ +NG + ++R+ YVG+ + ER E++
Sbjct: 138 VCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVR----- 191
Query: 301 AMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFS 360
T D+ N+++KN+GD IDDEKLKELF E+G S KV+RD SG SKG GFV +
Sbjct: 192 ----TRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYE 247
Query: 361 TPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMY 420
T E A +A+ +++GK I K LYV AQ+K ER A L+ +F ++ S PP +P+Y
Sbjct: 248 THEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERL--RLKEKSRPPGVPIY 305
>gi|395856984|ref|XP_003800896.1| PREDICTED: polyadenylate-binding protein 5 [Otolemur garnettii]
Length = 382
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 181/359 (50%), Positives = 240/359 (66%), Gaps = 7/359 (1%)
Query: 34 VGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNF 93
VGDLD +VT+ LY F G + R+CRD T LGYGYVN+ PADA AL+ +NF
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTHSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 94 TPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG 153
LN K R+M+S D +RKSG GNIFIKNLDKSID++AL FS+FGNILSCK+ D
Sbjct: 82 DLLNGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDD 141
Query: 154 SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK----FN 209
+G SKG+ +V F++ +A AI +NG+ +N++QV+VG F +ER ++T+ F
Sbjct: 142 NG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEER-AAEVRTRDRATFT 199
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEAL 269
NVFVKNL + DE LK++F EYG S V+RD GKSK FGFV +E + A KAV L
Sbjct: 200 NVFVKNLGDDMDDEKLKELFSEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDL 259
Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLK 329
+GK D + YVG+AQKK ER EL+ +FE+ + + G+ +YIKNL ++IDDEKLK
Sbjct: 260 HGKSIDGKILYVGRAQKKIERLAELRRRFERLRLKDKSRPPGVPIYIKNLDETIDDEKLK 319
Query: 330 ELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
E FS FG+I+ KVM + G KG G V FS+ EEA++A+ EMNG+ + SKPL+V + Q
Sbjct: 320 EEFSPFGSISRAKVMME-VGQGKGFGVVCFSSFEEAAKAVDEMNGRTVGSKPLHVTLGQ 377
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/300 (35%), Positives = 168/300 (56%), Gaps = 17/300 (5%)
Query: 122 IKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSK-GFGFVQFENKESAQNAIDKLNG 180
+ +LD + L+ F G + +I D S G+G+V F A+ A++ +N
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTHSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 181 MLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVV 240
L+N K + Q + + K+ N+F+KNLD+S + L +F +G I S V
Sbjct: 82 DLLNGKPF---RLMWSQPDDRLR-KSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKV 137
Query: 241 MRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQ 300
+ D +G SK + +V+F++ A +A+ +NG + ++R+ YVG+ + ER E++
Sbjct: 138 VCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVR----- 191
Query: 301 AMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFS 360
T D+ N+++KNLGD +DDEKLKELFSE+G S KV+RD SG SKG GFV +
Sbjct: 192 ----TRDRATFTNVFVKNLGDDMDDEKLKELFSEYGPTESVKVIRDASGKSKGFGFVRYE 247
Query: 361 TPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMY 420
T E A +A+ +++GK I K LYV AQ+K ER A L+ +F ++ S PP +P+Y
Sbjct: 248 THEAAQKAVLDLHGKSIDGKILYVGRAQKKIERLAELRRRFERL--RLKDKSRPPGVPIY 305
>gi|398016302|ref|XP_003861339.1| poly(A)-binding protein, putative [Leishmania donovani]
gi|322499565|emb|CBZ34638.1| poly(A)-binding protein, putative [Leishmania donovani]
Length = 544
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 218/577 (37%), Positives = 312/577 (54%), Gaps = 69/577 (11%)
Query: 30 TSLYVGDL--DFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARA 87
TS+YVGDL D + + +LFS V V+SV+VCRD++T+RSLGYGYVN+ ADA +
Sbjct: 8 TSVYVGDLPIDLPRPEEAINNLFSTVAPVVSVKVCRDMATQRSLGYGYVNFQTTADAEKV 67
Query: 88 LDVLNFTPLN-NKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
+D LN+T + + IR+M+S RDP RKSG N+F+K LD +I+ K L F+ G +LS
Sbjct: 68 IDALNYTGIAPGRQIRVMFSIRDPLQRKSGMNNVFVKKLDTAINAKELQAAFTKCGRVLS 127
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKT 206
CK+A D +G SKG+GFVQFE E A+ A+D +NG + D +V V F+R+ +RE +A K+
Sbjct: 128 CKVALDSAGNSKGYGFVQFETAEGAKAALD-MNGSKLGDSEVVVAPFVRRVDREVMAAKS 186
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
F N+++KN+ + T+ D+K ++G + S + +K F V FE + A +A+
Sbjct: 187 -FRNIYIKNIAAAATEADVKAAAEKFGKVNSLFLSEHAPFPTK-FALVAFEEHEAAVQAI 244
Query: 267 EALN-----GKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGD 321
ALN G + V +A KSER++E K ++ + G NLY+K+L D
Sbjct: 245 AALNESEESGLTEKAAKLVVCRALSKSERDREKKK------AASLYQNHGRNLYVKHLPD 298
Query: 322 SIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMI--VS 379
I D++L+E+F FG ITSC +M++P+G KG FV F + AS AL +NG+ +
Sbjct: 299 DITDDRLREIFEPFGKITSCAIMKEPNGTFKGFAFVCFEDRQHASAALRSLNGQPLEHSK 358
Query: 380 KPLYVAVAQRK-------EERRARLQAQFSQMRPVAMGPSVPPR---------MPMYPPG 423
KPLYV+ A++K ++RRA ++ Q + P+ P PR M PP
Sbjct: 359 KPLYVSHAEQKDMRIRLLQQRRAAMRHQSRMVPPMNTFPQQWPRHPFPHMVPPMMPPPPP 418
Query: 424 PSGLGQQFLYGQAPPAIIPPQMPP---RGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMG 480
P+ QF+ G P I P M P +G R P N P + VDM
Sbjct: 419 PNMGMPQFMSG---PMIRRPAMEPHLMQGEPMRPP---NRYTQPREQYPPQQRQDGVDMN 472
Query: 481 AGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLE 540
L+ SPEQQ+ LGE LY + LE AAK+TGMLLE
Sbjct: 473 ---------------------YLSTLSPEQQKNYLGELLYSRILPLESSNAAKITGMLLE 511
Query: 541 MDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANN 577
M + E+ +L AL +K+ EA VL QQ N
Sbjct: 512 MSREEIFEILADHFALLSKIQEANAVL----QQHTGN 544
>gi|47223169|emb|CAG11304.1| unnamed protein product [Tetraodon nigroviridis]
Length = 642
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 171/397 (43%), Positives = 249/397 (62%), Gaps = 32/397 (8%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
+SG + SLYVGDL +VT++ LY FS G ++S+RVCRD+ TRRSLGY Y+N+ P
Sbjct: 3 SSGPAYPLASLYVGDLHPDVTEAMLYQKFSPAGPIMSIRVCRDIITRRSLGYAYINFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
AD + + + Y R+ G +++L + +H L
Sbjct: 63 ADGSEEVG----------RGKHFYQEHGRVHRQQGA----VRHLLRIREHSVLQGKGQRC 108
Query: 142 ------------GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVF 189
G ++ D G SKG+GFV FE +E+A AI+ +NGML+ND++VF
Sbjct: 109 QGLCRDAGGDVTGRTALFQVVCDERG-SKGYGFVHFETEEAANRAIETMNGMLLNDRKVF 167
Query: 190 VGHFLRKQERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGK 247
VG+F ++ERE + KF NV++KN E TDE LK++F +G S VM+D G+
Sbjct: 168 VGNFKSRKEREEELGSKALKFTNVYIKNFGEDYTDEKLKEVFSAFGRTLSVRVMKDERGR 227
Query: 248 SKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVD 307
S+ FGFVNF + DA KAV+ +NG + + + YVG+AQK+ ER+ ELK +FE ++ +
Sbjct: 228 SRGFGFVNFAHHGDAQKAVDEMNGTELNGKVIYVGRAQKRLERQGELKRKFELIKQDRIQ 287
Query: 308 KFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRD-PSGISKGSGFVAFSTPEEAS 366
++QG+NLY+KNL D IDDE+L++ F+ +GTITS KVM D P S+G GFV FS+PEEA+
Sbjct: 288 RYQGVNLYVKNLDDGIDDERLRKEFAPYGTITSAKVMTDGPQ--SRGFGFVCFSSPEEAT 345
Query: 367 RALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQ 403
+A+ EMNG+++ +KPLYVA+AQR+EER+A L ++ Q
Sbjct: 346 KAVTEMNGRIVATKPLYVALAQRREERKAILTNKYMQ 382
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 159/536 (29%), Positives = 251/536 (46%), Gaps = 93/536 (17%)
Query: 61 VCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI-MYSHRDPSIRKSGT-- 117
VC + R S GYG+V++ A RA++ +N LN++ + + + R + G+
Sbjct: 129 VCDE---RGSKGYGFVHFETEEAANRAIETMNGMLLNDRKVFVGNFKSRKEREEELGSKA 185
Query: 118 ---GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNA 174
N++IKN + + L + FS+FG LS ++ D G+S+GFGFV F + AQ A
Sbjct: 186 LKFTNVYIKNFGEDYTDEKLKEVFSAFGRTLSVRVMKDERGRSRGFGFVNFAHHGDAQKA 245
Query: 175 IDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFN-------------NVFVKNLDESTT 221
+D++NG +N K ++VG ++ ER+ +K KF N++VKNLD+
Sbjct: 246 VDEMNGTELNGKVIYVGRAQKRLERQG-ELKRKFELIKQDRIQRYQGVNLYVKNLDDGID 304
Query: 222 DEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYV 281
DE L+K F YGTITSA VM DG +S+ FGFV F + ++A KAV +NG+ + YV
Sbjct: 305 DERLRKEFAPYGTITSAKVMTDGP-QSRGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 363
Query: 282 GKAQKKSEREQELKGQFEQAMKE-------TVDKFQGLNLYIKNLGDSIDDEKLKELFSE 334
AQ++ ER+ L ++ Q + +D +Q Y+ ++ + +S
Sbjct: 364 ALAQRREERKAILTNKYMQRLATLRTMSSPVIDSYQQAGYYM-----TVPQPPTRSFYS- 417
Query: 335 FGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGK-MIVSKPLYVAVAQRKEER 393
P+ +S A RAL G+ + P + R+
Sbjct: 418 ------------PNAVS-------------AMRALPRWTGQPHRLQGPYTIVSGPRRGS- 451
Query: 394 RARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAP-PAIIPPQMPPRGHAY 452
+ + V + P + + +G Q + G+A P I PR Y
Sbjct: 452 --------TPIASVRQASTQAPNIISSAQKTNNIGTQTVGGRADIPGI------PRSGQY 497
Query: 453 RYPLG-RNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALSTALANASPEQQ 511
+Y RN Q + V P+ + P+TA + LA A Q
Sbjct: 498 KYSSAVRNAQHV-----------IAVHAPPTRPQPSVHIQGQEPLTA--SMLAAAPLMDQ 544
Query: 512 RTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVL 567
+ LLGE LYPL+ L + A K+TGMLLE+D +E+LH+LE+PE+L +KV+ L
Sbjct: 545 KQLLGERLYPLISALHPNLAGKITGMLLEIDNSELLHMLETPESLHSKVSSRSSTL 600
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 149/293 (50%), Gaps = 28/293 (9%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDK 177
++++ +L + L+ FS G I+S ++ D + +S G+ ++ F+ + +
Sbjct: 12 SLYVGDLHPDVTEAMLYQKFSPAGPIMSIRVCRDIITRRSLGYAYINFQQPADGSEEVGR 71
Query: 178 LNGML-----INDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEY 232
++ +Q V H LR +E + K + ++ T
Sbjct: 72 GKHFYQEHGRVHRQQGAVRHLLRIREHSVLQGKGQRCQGLCRDAGGDVT----------- 120
Query: 233 GTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQ 292
G V+ D G SK +GFV+FE + A +A+E +NG +DR+ +VG + + ERE+
Sbjct: 121 GRTALFQVVCDERG-SKGYGFVHFETEEAANRAIETMNGMLLNDRKVFVGNFKSRKEREE 179
Query: 293 ELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISK 352
EL +A+K T N+YIKN G+ DEKLKE+FS FG S +VM+D G S+
Sbjct: 180 ELG---SKALKFT-------NVYIKNFGEDYTDEKLKEVFSAFGRTLSVRVMKDERGRSR 229
Query: 353 GSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
G GFV F+ +A +A+ EMNG + K +YV AQ++ ER+ L+ +F ++
Sbjct: 230 GFGFVNFAHHGDAQKAVDEMNGTELNGKVIYVGRAQKRLERQGELKRKFELIK 282
>gi|157870420|ref|XP_001683760.1| poly(A)-binding protein 3 [Leishmania major strain Friedlin]
gi|68126827|emb|CAJ04400.1| poly(A)-binding protein 3 [Leishmania major strain Friedlin]
Length = 544
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 217/579 (37%), Positives = 310/579 (53%), Gaps = 73/579 (12%)
Query: 30 TSLYVGDL--DFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARA 87
TS+YVGDL D + + +LFS V V+SV+VCRD++T+RSLGYGYVN+ ADA +
Sbjct: 8 TSVYVGDLPIDLPRPEEAINNLFSTVAPVVSVKVCRDMATQRSLGYGYVNFQTTADAEKV 67
Query: 88 LDVLNFTPLN-NKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
+D LN+T + + IR+M+S RDP RKSG N+F+K LD +I+ K L FS G +LS
Sbjct: 68 IDALNYTGIAPGRQIRVMFSIRDPLQRKSGMNNVFVKKLDTAINAKELQAAFSKCGRVLS 127
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKT 206
CK+A D +G SKG+GFVQFE + + A++ +NG + D +V V F+R+ +RE +A K+
Sbjct: 128 CKVALDSAGNSKGYGFVQFETADGTKAALE-MNGSKLGDSEVVVAPFVRRVDREAMAAKS 186
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
F N+++KN+ S T+ D+K I E+G + S + +K F V FE A +A+
Sbjct: 187 -FRNIYIKNITASATEADVKAIVEEFGKVDSLFLSEHARFPTK-FALVAFEEHQAAVQAI 244
Query: 267 EALN-----GKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGD 321
ALN G + V +A KSER++E K ++ + G NLYIK+L D
Sbjct: 245 AALNESEESGLTEKAVKLVVCRALSKSERDREKKK------AASLYQNHGRNLYIKHLPD 298
Query: 322 SIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMI--VS 379
I D++L+E+F FG ITSC +M++P+G KG FV F + AS AL +NG + +
Sbjct: 299 DITDDRLREIFEPFGKITSCAIMKEPNGTLKGFAFVCFEDKQHASAALRSLNGHPLEHSA 358
Query: 380 KPLYVAVAQRKEERRARLQAQFSQMRPVA-MGP---SVPPRMPMYPPGPSGLGQ------ 429
KPLYV+ A++K+ R LQ + + MR + M P + P + P +P
Sbjct: 359 KPLYVSHAEQKDMRIRLLQQRRAAMRHQSRMAPLMNTFPQQWPRHPFPHMVPPMMPPPPP 418
Query: 430 ------QFLYGQAPPAIIPPQMPP---RGHAYRYP--LGRNMQDFPFDMGAGSMLPVPVD 478
QF+ G P I P M P +G R P + + +P VD
Sbjct: 419 PNMGMPQFMSG---PMIRRPVMEPHLMQGEPMRPPNRYTQAREQYPPQQRQDG-----VD 470
Query: 479 MGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGML 538
M L+ SPEQQ+ LGE LY + LE AAK+TGML
Sbjct: 471 MNY---------------------LSTLSPEQQKNYLGELLYSRILPLESSNAAKITGML 509
Query: 539 LEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANN 577
LEM + E+ +L AL +K+ EA VL QQ N
Sbjct: 510 LEMSREEIFEILADHFALLSKIQEANAVL----QQHTGN 544
>gi|354499752|ref|XP_003511970.1| PREDICTED: polyadenylate-binding protein 5-like [Cricetulus
griseus]
gi|344240775|gb|EGV96878.1| Polyadenylate-binding protein 5 [Cricetulus griseus]
Length = 382
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 175/362 (48%), Positives = 237/362 (65%), Gaps = 7/362 (1%)
Query: 34 VGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNF 93
VGDL VT+ LY F G + R+CRD T LGYGYVN+ PADA AL+ +NF
Sbjct: 22 VGDLGPEVTEDMLYKKFRPAGPLRFTRICRDPVTHSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 94 TPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG 153
+N K R+M+S D +RKSG GNIFIK+LDKSID++ L FS+FGNILSCK+ D
Sbjct: 82 DLINGKPFRLMWSQPDDRLRKSGVGNIFIKHLDKSIDNRTLFYLFSAFGNILSCKVVCDD 141
Query: 154 SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK----FN 209
+G SKG+ +V F++ +A AI +NG+ +N++QV+VG F +ER ++T+ F
Sbjct: 142 NG-SKGYAYVHFDSLAAANRAIWHMNGVWLNNRQVYVGRFKFPEER-AAEVRTRDRATFT 199
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEAL 269
NVFVKNL ++ DE LK++F EYG S V+RD GKSK FGFV +E + A K+V L
Sbjct: 200 NVFVKNLGDNMDDEKLKELFSEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKSVLDL 259
Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLK 329
+GK D + YVG+AQKK ER EL+ +FE+ + + G+ +YIKNL ++IDDEKLK
Sbjct: 260 HGKTIDGKVLYVGRAQKKIERLAELRRRFERLKLKEKSRPPGVPIYIKNLDETIDDEKLK 319
Query: 330 ELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQR 389
E FS FG+I+ KVM + G KG V FS+ EEA++A+ EMNG ++ SKPL V + Q
Sbjct: 320 EEFSSFGSISRAKVMME-MGQGKGFAVVCFSSFEEATKAVDEMNGPVLGSKPLSVTLGQA 378
Query: 390 KE 391
+
Sbjct: 379 RH 380
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 105/300 (35%), Positives = 168/300 (56%), Gaps = 17/300 (5%)
Query: 122 IKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSK-GFGFVQFENKESAQNAIDKLNG 180
+ +L + L+ F G + +I D S G+G+V F A+ A++ +N
Sbjct: 22 VGDLGPEVTEDMLYKKFRPAGPLRFTRICRDPVTHSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 181 MLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVV 240
LIN K + Q + + K+ N+F+K+LD+S + L +F +G I S V
Sbjct: 82 DLINGKPF---RLMWSQPDDRLR-KSGVGNIFIKHLDKSIDNRTLFYLFSAFGNILSCKV 137
Query: 241 MRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQ 300
+ D +G SK + +V+F++ A +A+ +NG ++R+ YVG+ + ER E++
Sbjct: 138 VCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVWLNNRQVYVGRFKFPEERAAEVR----- 191
Query: 301 AMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFS 360
T D+ N+++KNLGD++DDEKLKELFSE+G S KV+RD SG SKG GFV +
Sbjct: 192 ----TRDRATFTNVFVKNLGDNMDDEKLKELFSEYGPTESVKVIRDASGKSKGFGFVRYE 247
Query: 361 TPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMY 420
T E A +++ +++GK I K LYV AQ+K ER A L+ +F +++ S PP +P+Y
Sbjct: 248 THEAAQKSVLDLHGKTIDGKVLYVGRAQKKIERLAELRRRFERLK--LKEKSRPPGVPIY 305
>gi|18201888|ref|NP_543022.1| polyadenylate-binding protein 5 [Homo sapiens]
gi|115392093|ref|NP_001065269.1| polyadenylate-binding protein 5 [Pan troglodytes]
gi|332239776|ref|XP_003269075.1| PREDICTED: polyadenylate-binding protein 5 [Nomascus leucogenys]
gi|426396593|ref|XP_004064521.1| PREDICTED: polyadenylate-binding protein 5-like [Gorilla gorilla
gorilla]
gi|28201851|sp|Q96DU9.1|PABP5_HUMAN RecName: Full=Polyadenylate-binding protein 5; Short=PABP-5;
Short=Poly(A)-binding protein 5
gi|38502886|sp|P60047.1|PABP5_GORGO RecName: Full=Polyadenylate-binding protein 5; Short=PABP-5;
Short=Poly(A)-binding protein 5
gi|38502887|sp|P60048.1|PABP5_HYLLA RecName: Full=Polyadenylate-binding protein 5; Short=PABP-5;
Short=Poly(A)-binding protein 5
gi|38502888|sp|P60049.1|PABP5_PANTR RecName: Full=Polyadenylate-binding protein 5; Short=PABP-5;
Short=Poly(A)-binding protein 5
gi|38502889|sp|P60050.1|PABP5_PONPY RecName: Full=Polyadenylate-binding protein 5; Short=PABP-5;
Short=Poly(A)-binding protein 5
gi|14571705|emb|CAC42817.1| Poly(A)-binding protein cytoplasmic 5 [Gorilla gorilla]
gi|14571711|emb|CAC42818.1| Poly(A)-binding protein cytoplasmic 5 [Hylobates lar]
gi|14571756|emb|CAC42822.1| Poly(A)-binding protein cytoplasmic 5 [Pongo pygmaeus]
gi|14571764|emb|CAC42823.1| poly(A)-binding protein cytoplasmic 5 [Pan troglodytes]
gi|14572616|emb|CAC42826.1| Poly(A)-binding protein cytoplasmic 5 [Homo sapiens]
gi|38649270|gb|AAH63113.1| Poly(A) binding protein, cytoplasmic 5 [Homo sapiens]
gi|119623181|gb|EAX02776.1| poly(A) binding protein, cytoplasmic 5 [Homo sapiens]
gi|158261233|dbj|BAF82794.1| unnamed protein product [Homo sapiens]
gi|208968659|dbj|BAG74168.1| poly(A) binding protein, cytoplasmic 5 [synthetic construct]
gi|312151110|gb|ADQ32067.1| poly(A) binding protein, cytoplasmic 5 [synthetic construct]
gi|410208314|gb|JAA01376.1| poly(A) binding protein, cytoplasmic 5 [Pan troglodytes]
gi|410305648|gb|JAA31424.1| poly(A) binding protein, cytoplasmic 5 [Pan troglodytes]
Length = 382
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 179/359 (49%), Positives = 242/359 (67%), Gaps = 7/359 (1%)
Query: 34 VGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNF 93
VGDLD +VT+ LY F G + R+CRD TR LGYGYVN+ PADA AL+ +NF
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 94 TPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG 153
+N K R+M+S D +RKSG GNIFIKNLDKSID++AL FS+FGNILSCK+ D
Sbjct: 82 DLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDD 141
Query: 154 SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK----FN 209
+G SKG+ +V F++ +A AI +NG+ +N++QV+VG F +ER ++T+ F
Sbjct: 142 NG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEER-AAEVRTRDRATFT 199
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEAL 269
NVFVKN+ + DE LK++F EYG S V+RD GKSK FGFV +E + A KAV L
Sbjct: 200 NVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDL 259
Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLK 329
+GK D + YVG+AQKK ER EL+ +FE+ + + G+ +YIKNL ++I+DEKLK
Sbjct: 260 HGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLK 319
Query: 330 ELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
E FS FG+I+ KVM + G KG G V FS+ EEA++A+ EMNG+++ SKPL+V + Q
Sbjct: 320 EEFSSFGSISRAKVMME-VGQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLGQ 377
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 107/300 (35%), Positives = 168/300 (56%), Gaps = 17/300 (5%)
Query: 122 IKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSK-GFGFVQFENKESAQNAIDKLNG 180
+ +LD + L+ F G + +I D +S G+G+V F A+ A++ +N
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 181 MLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVV 240
LIN K + Q + + K+ N+F+KNLD+S + L +F +G I S V
Sbjct: 82 DLINGKPF---RLMWSQPDDRLR-KSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKV 137
Query: 241 MRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQ 300
+ D +G SK + +V+F++ A +A+ +NG + ++R+ YVG+ + ER E++
Sbjct: 138 VCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVR----- 191
Query: 301 AMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFS 360
T D+ N+++KN+GD IDDEKLKELF E+G S KV+RD SG SKG GFV +
Sbjct: 192 ----TRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYE 247
Query: 361 TPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMY 420
T E A +A+ +++GK I K LYV AQ+K ER A L+ +F ++ S PP +P+Y
Sbjct: 248 THEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERL--RLKEKSRPPGVPIY 305
>gi|146088402|ref|XP_001466041.1| putative poly(A)-binding protein 3 [Leishmania infantum JPCM5]
gi|134070143|emb|CAM68476.1| putative poly(A)-binding protein 3 [Leishmania infantum JPCM5]
Length = 544
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 219/577 (37%), Positives = 311/577 (53%), Gaps = 69/577 (11%)
Query: 30 TSLYVGDL--DFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARA 87
TS+YVGDL D + + +LFS V V+SV+VCRD++T+RSLGYGYVN+ ADA +
Sbjct: 8 TSVYVGDLPIDLPRPEEAINNLFSTVAPVVSVKVCRDMATQRSLGYGYVNFQTTADAEKV 67
Query: 88 LDVLNFTPLN-NKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
+D LN+T + IR+M+S RDP RKSG N+F+K LD +I+ K L F+ G +LS
Sbjct: 68 IDALNYTGIAPGLQIRVMFSIRDPLQRKSGMNNVFVKKLDTAINAKELQAAFTKCGRVLS 127
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKT 206
CK+A D +G SKG+GFVQFE E A+ A+D +NG + D +V V F+R+ +RE +A K+
Sbjct: 128 CKVALDSAGNSKGYGFVQFETAEGAKAALD-MNGSKLGDSEVVVAPFVRRVDREVMAAKS 186
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
F N+++KN+ + T+ D+K ++G + S + +K F V FE + A +A+
Sbjct: 187 -FRNIYIKNIAAAATEADVKAAAEKFGKVNSLFLSEHAPFPTK-FALVAFEEHEAAVQAI 244
Query: 267 EALN-----GKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGD 321
ALN G + V +A KSER++E K ++ + G NLY+K+L D
Sbjct: 245 AALNESEESGLTEKAAKLVVCRALSKSERDREKKK------AASLYQNHGRNLYVKHLPD 298
Query: 322 SIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMI--VS 379
I D+KL+E+F FG ITSC +M++P+G KG FV F + AS AL +NG+ +
Sbjct: 299 DITDDKLREIFEPFGKITSCAIMKEPNGTFKGFAFVCFEDRQHASAALRSLNGQPLEHSK 358
Query: 380 KPLYVAVAQRK-------EERRARLQAQFSQMRPVAMGPSVPPR---------MPMYPPG 423
KPLYV+ A++K ++RRA ++ Q + P+ P PR M PP
Sbjct: 359 KPLYVSHAEQKDMRIRLLQQRRAAMRHQSRMVPPMNTFPQQWPRHPFPHMVPPMMPPPPP 418
Query: 424 PSGLGQQFLYGQAPPAIIPPQMPP---RGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMG 480
P+ QF+ G P I P M P +G R P N P + VDM
Sbjct: 419 PNMGMPQFMSG---PMIRRPAMEPHLMQGEPMRPP---NRYTQPREQYPPQQRQDGVDMN 472
Query: 481 AGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLE 540
L+ SPEQQ+ LGE LY + LE AAK+TGMLLE
Sbjct: 473 ---------------------YLSTLSPEQQKNYLGELLYSRILPLESSNAAKITGMLLE 511
Query: 541 MDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANN 577
M + E+ +L AL +K+ EA VL QQ N
Sbjct: 512 MSREEIFEILADHFALLSKIQEANAVL----QQHTGN 544
>gi|403295651|ref|XP_003938748.1| PREDICTED: polyadenylate-binding protein 5 [Saimiri boliviensis
boliviensis]
Length = 382
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 179/359 (49%), Positives = 242/359 (67%), Gaps = 7/359 (1%)
Query: 34 VGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNF 93
VGDLD +VT+ LY F G + R+CRD TR LGYGYVN+ PADA AL+ +NF
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 94 TPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG 153
+N K R+M+S D +RKSG GNIFIKNLDKSID++AL FS+FGNILSCK+ D
Sbjct: 82 DLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDD 141
Query: 154 SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK----FN 209
+G SKG+ +V F++ +A AI +NG+ +N++QV+VG F +ER ++T+ F
Sbjct: 142 NG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEER-AAEVRTRDRATFT 199
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEAL 269
NVFVKN+ + DE LK++F EYG S V+RD GKSK FGFV +E + A KAV L
Sbjct: 200 NVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDL 259
Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLK 329
+GK D + YVG+AQKK ER EL+ +FE+ + + G+ +YIKNL ++I+DEKLK
Sbjct: 260 HGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLK 319
Query: 330 ELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
E FS FG+I+ KVM + G KG G V FS+ EEA++A+ EMNG+++ SKPL+V + Q
Sbjct: 320 EEFSSFGSISRAKVMLE-VGQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLGQ 377
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 107/300 (35%), Positives = 168/300 (56%), Gaps = 17/300 (5%)
Query: 122 IKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSK-GFGFVQFENKESAQNAIDKLNG 180
+ +LD + L+ F G + +I D +S G+G+V F A+ A++ +N
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 181 MLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVV 240
LIN K + Q + + K+ N+F+KNLD+S + L +F +G I S V
Sbjct: 82 DLINGKPF---RLMWSQPDDRLR-KSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKV 137
Query: 241 MRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQ 300
+ D +G SK + +V+F++ A +A+ +NG + ++R+ YVG+ + ER E++
Sbjct: 138 VCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVR----- 191
Query: 301 AMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFS 360
T D+ N+++KN+GD IDDEKLKELF E+G S KV+RD SG SKG GFV +
Sbjct: 192 ----TRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYE 247
Query: 361 TPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMY 420
T E A +A+ +++GK I K LYV AQ+K ER A L+ +F ++ S PP +P+Y
Sbjct: 248 THEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERL--RLKEKSRPPGVPIY 305
>gi|113461967|ref|NP_001038193.1| polyadenylate-binding protein 5 [Macaca mulatta]
gi|402910717|ref|XP_003918003.1| PREDICTED: polyadenylate-binding protein 5 [Papio anubis]
gi|50400917|sp|Q7JGR2.1|PABP5_MACMU RecName: Full=Polyadenylate-binding protein 5; Short=PABP-5;
Short=Poly(A)-binding protein 5
gi|14571725|emb|CAC42819.1| Poly(A)-binding protein cytoplasmic 5 [Macaca mulatta]
gi|14571737|emb|CAC42821.1| Poly(A)-binding protein cytoplasmic 5 [Miopithecus talapoin]
gi|90082100|dbj|BAE90331.1| unnamed protein product [Macaca fascicularis]
gi|355704969|gb|EHH30894.1| Polyadenylate-binding protein 5 [Macaca mulatta]
gi|355757521|gb|EHH61046.1| Polyadenylate-binding protein 5 [Macaca fascicularis]
Length = 382
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 179/359 (49%), Positives = 242/359 (67%), Gaps = 7/359 (1%)
Query: 34 VGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNF 93
VGDLD +VT+ LY F G + R+CRD TR LGYGYVN+ PADA AL+ +NF
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 94 TPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG 153
+N K R+M+S D +RKSG GNIFIKNLDKSID++AL FS+FGNILSCK+ D
Sbjct: 82 DLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDD 141
Query: 154 SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK----FN 209
+G SKG+ +V F++ +A AI +NG+ +N++QV+VG F +ER ++T+ F
Sbjct: 142 NG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEER-AAEVRTRDRATFT 199
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEAL 269
NVFVKN+ + DE LK++F EYG S V+RD GKSK FGFV +E + A KAV L
Sbjct: 200 NVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDL 259
Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLK 329
+GK D + YVG+AQKK ER EL+ +FE+ + + G+ +YIKNL ++I+DEKLK
Sbjct: 260 HGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLK 319
Query: 330 ELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
E FS FG+I+ KVM + G KG G V FS+ EEA++A+ EMNG+++ SKPL+V + Q
Sbjct: 320 EEFSSFGSISRAKVMME-VGQGKGFGVVCFSSFEEATKAVDEMNGRVVGSKPLHVTLGQ 377
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 107/300 (35%), Positives = 168/300 (56%), Gaps = 17/300 (5%)
Query: 122 IKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSK-GFGFVQFENKESAQNAIDKLNG 180
+ +LD + L+ F G + +I D +S G+G+V F A+ A++ +N
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 181 MLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVV 240
LIN K + Q + + K+ N+F+KNLD+S + L +F +G I S V
Sbjct: 82 DLINGKPF---RLMWSQPDDRLR-KSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKV 137
Query: 241 MRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQ 300
+ D +G SK + +V+F++ A +A+ +NG + ++R+ YVG+ + ER E++
Sbjct: 138 VCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVR----- 191
Query: 301 AMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFS 360
T D+ N+++KN+GD IDDEKLKELF E+G S KV+RD SG SKG GFV +
Sbjct: 192 ----TRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYE 247
Query: 361 TPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMY 420
T E A +A+ +++GK I K LYV AQ+K ER A L+ +F ++ S PP +P+Y
Sbjct: 248 THEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERL--RLKEKSRPPGVPIY 305
>gi|71745214|ref|XP_827237.1| polyadenylate-binding protein 1 [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|70831402|gb|EAN76907.1| polyadenylate-binding protein 1, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
gi|261331451|emb|CBH14445.1| PABP1 [Trypanosoma brucei gambiense DAL972]
Length = 566
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 167/391 (42%), Positives = 250/391 (63%), Gaps = 27/391 (6%)
Query: 17 GVAAGASGNQFL-TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGY 75
GV +G S + L SLYVGDLD + + QL D+F G +L+VRVCRD+ T+RSLGYGY
Sbjct: 7 GVPSGPSATKPLQVASLYVGDLDPAINEPQLVDIFKPYGTILNVRVCRDIITQRSLGYGY 66
Query: 76 VNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALH 135
VNY + A++A++ LNF + K IRIM+ RDP++R SG+GNIF+KNL + +D + L
Sbjct: 67 VNYDDVNSASKAMEELNFKRVGEKCIRIMWQQRDPALRYSGSGNIFVKNLKEEVDSRELS 126
Query: 136 DTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQ-------- 187
F FG ILSCK+ D SG+S+G+GFV F++ ++A+ AI+K+NG DK+
Sbjct: 127 LIFKKFGEILSCKVMDDESGKSRGYGFVHFKDDDAAKAAIEKMNG----DKEHADADKAA 182
Query: 188 VFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGK 247
++V +F+R+ R A+ F NV++K L + + ++K F ++G ITSA + +D +G+
Sbjct: 183 LYVANFIRRNAR-LAALVANFTNVYIKQLLPTVDKDVIEKFFSKFGGITSAAICKDKNGR 241
Query: 248 SKCFGFVNFENADDAAKAVEALNGKKFD-----DREWYVGKAQKKSEREQELKGQFEQAM 302
+ F F NFE DDA KA+EA + ++ + + YV +AQ +SER L+ ++ Q
Sbjct: 242 A--FAFCNFEKHDDAVKAIEASHDQEVEGVTQPGEKLYVQRAQPRSERLIALRQKYMQCQ 299
Query: 303 KETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTP 362
G NLY++N ++ L ELF E+G I SC+VM D +GIS+G GFV+F
Sbjct: 300 S------LGNNLYVRNFDAEFTEKDLNELFKEYGVIRSCRVMTDANGISRGFGFVSFENA 353
Query: 363 EEASRALAEMNGKMIVSKPLYVAVAQRKEER 393
++A+ AL EMNG+M+ KPL V +AQR+++R
Sbjct: 354 DQANAALREMNGRMLNGKPLVVNIAQRRDQR 384
>gi|401423147|ref|XP_003876060.1| putative poly(A)-binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492301|emb|CBZ27575.1| putative poly(A)-binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 544
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 216/577 (37%), Positives = 311/577 (53%), Gaps = 69/577 (11%)
Query: 30 TSLYVGDL--DFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARA 87
TS+YVGDL D + + +LFS V V+SV+VCRD++T+RSLGYGYVN+ PADA +
Sbjct: 8 TSVYVGDLPIDLPRPEEAINNLFSTVAPVVSVKVCRDMATQRSLGYGYVNFQTPADAEKV 67
Query: 88 LDVLNFTPLN-NKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
+D LN+T + + IR+M+S RDP RKSG N+F+K LD +++ K L F+ G +LS
Sbjct: 68 IDALNYTGITPGRQIRVMFSIRDPIQRKSGMNNVFVKKLDTAVNAKELQAAFTKCGRVLS 127
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKT 206
CK+A D +G SKG+GFVQFE + A+ A++ ++G + D +V V FLR+ +RE +A K+
Sbjct: 128 CKVALDSAGNSKGYGFVQFETADGAKAALE-MDGSKLGDCEVVVAPFLRRVDREVMAAKS 186
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
F N+++KNL + + D+K +G + S + +K F V FE + A KA+
Sbjct: 187 -FRNIYIKNLKATVAEADVKTTVETFGKVNSLFLSEHAPFPTK-FALVAFEEHEAAVKAI 244
Query: 267 EALN-----GKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGD 321
ALN G + V +A KSER++E K ++ + G NLY+K+L D
Sbjct: 245 AALNESEESGLTEKAAKLVVCRALSKSERDREKKK------AASLYQNHGRNLYVKHLPD 298
Query: 322 SIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMI--VS 379
I D++L+E+F+ FG ITSC +M++P+G KG FV F + AS AL +NG +
Sbjct: 299 DITDDRLREIFAPFGKITSCAIMKEPNGTFKGFAFVCFEDRQHASAALRSLNGHSLDNSK 358
Query: 380 KPLYVAVAQRKEERRARLQAQFSQMRPVA-MGP---SVPPRMPMYP------------PG 423
K LYV+ A++K+ R LQ + + MR + M P + P + P +P P
Sbjct: 359 KLLYVSQAEQKDMRIRLLQQRRAAMRHQSRMAPPMNTFPQQWPRHPFSHMAPPMMPPPPP 418
Query: 424 PSGLGQQFLYGQAPPAIIPPQMPP---RGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMG 480
P+ QF+ G P I P M P +G R P N P + VDM
Sbjct: 419 PNMGMPQFMSG---PMIRRPVMEPHLLQGEPMRPP---NRYTQPREQYPPQQRQDGVDMD 472
Query: 481 AGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLE 540
L+ SPEQQ+ LGE LY + LE AAK+TGMLLE
Sbjct: 473 ---------------------YLSTLSPEQQKNYLGELLYSRILPLESSNAAKITGMLLE 511
Query: 541 MDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANN 577
M + E+ +L AL +K+ EA VL QQ N
Sbjct: 512 MSREEIFEILGDQFALLSKIQEANVVL----QQHTGN 544
>gi|197097448|ref|NP_001126434.1| polyadenylate-binding protein 5 [Pongo abelii]
gi|55731438|emb|CAH92432.1| hypothetical protein [Pongo abelii]
Length = 382
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 178/359 (49%), Positives = 242/359 (67%), Gaps = 7/359 (1%)
Query: 34 VGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNF 93
VGDLD +VT+ LY F G + R+CRD TR LGYGYVN+ PADA AL+ +NF
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 94 TPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG 153
+N K R+M+S D +RKSG GNIFIKNLDKSID++AL FS+FG+ILSCK+ D
Sbjct: 82 DLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGDILSCKVVCDD 141
Query: 154 SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK----FN 209
+G SKG+ +V F++ +A AI +NG+ +N++QV+VG F +ER ++T+ F
Sbjct: 142 NG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEER-AAEVRTRDRATFT 199
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEAL 269
NVFVKN+ + DE LK++F EYG S V+RD GKSK FGFV +E + A KAV L
Sbjct: 200 NVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDL 259
Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLK 329
+GK D + YVG+AQKK ER EL+ +FE+ + + G+ +YIKNL ++I+DEKLK
Sbjct: 260 HGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLK 319
Query: 330 ELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
E FS FG+I+ KVM + G KG G V FS+ EEA++A+ EMNG+++ SKPL+V + Q
Sbjct: 320 EEFSSFGSISRAKVMME-VGQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLGQ 377
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 107/300 (35%), Positives = 168/300 (56%), Gaps = 17/300 (5%)
Query: 122 IKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSK-GFGFVQFENKESAQNAIDKLNG 180
+ +LD + L+ F G + +I D +S G+G+V F A+ A++ +N
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 181 MLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVV 240
LIN K + Q + + K+ N+F+KNLD+S + L +F +G I S V
Sbjct: 82 DLINGKPF---RLMWSQPDDRLR-KSGVGNIFIKNLDKSIDNRALFYLFSAFGDILSCKV 137
Query: 241 MRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQ 300
+ D +G SK + +V+F++ A +A+ +NG + ++R+ YVG+ + ER E++
Sbjct: 138 VCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVR----- 191
Query: 301 AMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFS 360
T D+ N+++KN+GD IDDEKLKELF E+G S KV+RD SG SKG GFV +
Sbjct: 192 ----TRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYE 247
Query: 361 TPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMY 420
T E A +A+ +++GK I K LYV AQ+K ER A L+ +F ++ S PP +P+Y
Sbjct: 248 THEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERL--RLKEKSRPPGVPIY 305
>gi|224059164|ref|XP_002299747.1| predicted protein [Populus trichocarpa]
gi|222847005|gb|EEE84552.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 168/356 (47%), Positives = 232/356 (65%), Gaps = 6/356 (1%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDLD VT++ L F VG + S+R+CR T +SL Y YVN + A A+RAL +
Sbjct: 18 SLYVGDLDPEVTETDLRAAFYHVGPISSLRLCRCRLTGKSLCYAYVNLYSHAQASRALGL 77
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
LN T L K +RIM+ RDP RK+G N+F+KNLD SI L FS +G ILSCK+A
Sbjct: 78 LNHTNLKGKPMRIMWCQRDPFARKTGFANLFVKNLDFSISSSCLESIFSKYGTILSCKVA 137
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNN 210
+ +G+SKGFGFVQFE+++SA A L+ ++ K++ V F++K ER A F N
Sbjct: 138 GE-NGRSKGFGFVQFESQDSALVAQTALHDTMLGGKKLHVCKFVKKTERTAAAPCEVFTN 196
Query: 211 VFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALN 270
++VKNLDE+ T++ LK +F G ++S +M D +GKSK FGFVNF++ DDA KAV+ +N
Sbjct: 197 LYVKNLDETITEDGLKDMFSVVGDVSSVAIMMDHEGKSKHFGFVNFKSPDDAKKAVDVMN 256
Query: 271 GKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKE 330
G + +VGKAQ+KSER LK +++ + +K + NLY+KNL IDD+KLKE
Sbjct: 257 GSVIGSKTLFVGKAQRKSERTMILKQEYKDLHNRSTEKLRASNLYVKNLNVDIDDKKLKE 316
Query: 331 LFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 386
+FS +G I S KV+ G SK GFV F++PEEA++AL +NG PL+ +V
Sbjct: 317 VFSAYGKILSVKVICHNDGTSKQFGFVCFASPEEANKALVALNG-----HPLFFSV 367
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/289 (33%), Positives = 151/289 (52%), Gaps = 18/289 (6%)
Query: 118 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA-TDGSGQSKGFGFVQFENKESAQNAID 176
++++ +LD + L F G I S ++ +G+S + +V + A A+
Sbjct: 17 ASLYVGDLDPEVTETDLRAAFYHVGPISSLRLCRCRLTGKSLCYAYVNLYSHAQASRALG 76
Query: 177 KLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTIT 236
LN + K + + +R+ A KT F N+FVKNLD S + L+ IF +YGTI
Sbjct: 77 LLNHTNLKGKPMRI----MWCQRDPFARKTGFANLFVKNLDFSISSSCLESIFSKYGTIL 132
Query: 237 SAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKG 296
S V + +G+SK FGFV FE+ D A A AL+ ++ +V K KK+ER
Sbjct: 133 SCKVAGE-NGRSKGFGFVQFESQDSALVAQTALHDTMLGGKKLHVCKFVKKTERTAAAPC 191
Query: 297 QFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGF 356
+ NLY+KNL ++I ++ LK++FS G ++S +M D G SK GF
Sbjct: 192 EVFT------------NLYVKNLDETITEDGLKDMFSVVGDVSSVAIMMDHEGKSKHFGF 239
Query: 357 VAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
V F +P++A +A+ MNG +I SK L+V AQRK ER L+ ++ +
Sbjct: 240 VNFKSPDDAKKAVDVMNGSVIGSKTLFVGKAQRKSERTMILKQEYKDLH 288
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 93/167 (55%), Gaps = 17/167 (10%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
T+LYV +LD +T+ L D+FS VG V SV + D +S +G+VN+ +P DA +A+D
Sbjct: 195 TNLYVKNLDETITEDGLKDMFSVVGDVSSVAIMMD-HEGKSKHFGFVNFKSPDDAKKAVD 253
Query: 90 VLNFTPLNNKSIRIMYSHR----------------DPSIRKSGTGNIFIKNLDKSIDHKA 133
V+N + + +K++ + + R + S K N+++KNL+ ID K
Sbjct: 254 VMNGSVIGSKTLFVGKAQRKSERTMILKQEYKDLHNRSTEKLRASNLYVKNLNVDIDDKK 313
Query: 134 LHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNG 180
L + FS++G ILS K+ G SK FGFV F + E A A+ LNG
Sbjct: 314 LKEVFSAYGKILSVKVICHNDGTSKQFGFVCFASPEEANKALVALNG 360
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRV-CRDLSTRRSLGYGYVNYANP 81
S + ++LYV +L+ ++ D +L ++FS G++LSV+V C + T + +G+V +A+P
Sbjct: 291 STEKLRASNLYVKNLNVDIDDKKLKEVFSAYGKILSVKVICHNDGTSKQ--FGFVCFASP 348
Query: 82 ADAARALDVLNFTPL 96
+A +AL LN PL
Sbjct: 349 EEANKALVALNGHPL 363
>gi|348570452|ref|XP_003471011.1| PREDICTED: polyadenylate-binding protein 5-like [Cavia porcellus]
Length = 382
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 177/359 (49%), Positives = 239/359 (66%), Gaps = 7/359 (1%)
Query: 34 VGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNF 93
VGDLD VT+ LY F G + R+CRD T LGYGYVN+ PADA AL+ +NF
Sbjct: 22 VGDLDPEVTEDMLYKKFRPAGPLRFTRICRDPVTHSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 94 TPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG 153
+N K R+M+S D +RKSG GNIFIKNLDKSID+++L FS+FGNILSCK+ D
Sbjct: 82 DLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRSLFYLFSAFGNILSCKVVCDD 141
Query: 154 SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK----FN 209
+G SKG+ +V F++ +A AI +NG+ +N++QV+VG F +ER ++T+ F
Sbjct: 142 NG-SKGYAYVHFDSLAAANRAIWHMNGVQLNNRQVYVGRFKFPEER-AAEVRTRDKATFT 199
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEAL 269
NVFVKNL + DE LK +F EYG S ++RD GKSK FGFV +E D A KAV L
Sbjct: 200 NVFVKNLGDDMDDEKLKTLFSEYGQTESVKLVRDASGKSKGFGFVRYETHDAAQKAVLDL 259
Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLK 329
+GK D + YVG+AQKK ER EL+ +FE+ + + G+ +YIKNL ++ID+EKLK
Sbjct: 260 HGKSVDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETIDEEKLK 319
Query: 330 ELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
E FS FG+I+ KVM + G KG G + FS+ EEA++A+ EMNG+++ SKPL+V + Q
Sbjct: 320 EEFSAFGSISRAKVMME-VGQGKGFGVICFSSFEEATKAVEEMNGRLVGSKPLHVTLGQ 377
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 105/300 (35%), Positives = 167/300 (55%), Gaps = 17/300 (5%)
Query: 122 IKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSK-GFGFVQFENKESAQNAIDKLNG 180
+ +LD + L+ F G + +I D S G+G+V F A+ A++ +N
Sbjct: 22 VGDLDPEVTEDMLYKKFRPAGPLRFTRICRDPVTHSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 181 MLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVV 240
LIN K + Q + + K+ N+F+KNLD+S + L +F +G I S V
Sbjct: 82 DLINGKPF---RLMWSQPDDRLR-KSGVGNIFIKNLDKSIDNRSLFYLFSAFGNILSCKV 137
Query: 241 MRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQ 300
+ D +G SK + +V+F++ A +A+ +NG + ++R+ YVG+ + ER E++
Sbjct: 138 VCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVQLNNRQVYVGRFKFPEERAAEVR----- 191
Query: 301 AMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFS 360
T DK N+++KNLGD +DDEKLK LFSE+G S K++RD SG SKG GFV +
Sbjct: 192 ----TRDKATFTNVFVKNLGDDMDDEKLKTLFSEYGQTESVKLVRDASGKSKGFGFVRYE 247
Query: 361 TPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMY 420
T + A +A+ +++GK + K LYV AQ+K ER A L+ +F ++ S PP +P+Y
Sbjct: 248 THDAAQKAVLDLHGKSVDGKVLYVGRAQKKIERLAELRRRFERL--RLKEKSRPPGVPIY 305
>gi|10086463|gb|AAG12523.1|AC015446_4 Similar to Polyadenylate-Binding Proteins 2 and 5 [Arabidopsis
thaliana]
Length = 338
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 161/310 (51%), Positives = 222/310 (71%), Gaps = 5/310 (1%)
Query: 35 GDLDFNVTDSQLYDLFSQVGQ-VLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNF 93
GDLD +V + LY FS+ + SV+VC D +T SLGYGYVN+ + + A A++VLN+
Sbjct: 18 GDLDSSVEEGDLYTKFSEFTHDISSVKVCCDRNTGLSLGYGYVNFNHSSQAKTAMEVLNY 77
Query: 94 TPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG 153
L K +RIM+S RDPS R SG GN+F+KNLD+SID+K L D FS+FG +LSCK+A D
Sbjct: 78 CKLKGKPMRIMFSERDPSNRMSGRGNVFVKNLDESIDNKQLCDMFSAFGKVLSCKVARDA 137
Query: 154 SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFV 213
SG SKG+GFVQF + S A + NG LI ++ + V F+ + + + + F NV+V
Sbjct: 138 SGVSKGYGFVQFYSDLSVYTACNFHNGTLIRNQHIHVCPFVSRGQWDKSRV---FTNVYV 194
Query: 214 KNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKK 273
KNL E+ TD DLK++FGE+G ITSAVVM+DG+GKS+ FGFVNFE A+ A A+E +NG
Sbjct: 195 KNLVETATDADLKRLFGEFGEITSAVVMKDGEGKSRRFGFVNFEKAEAAVTAIEKMNGVV 254
Query: 274 FDDREWYVGKAQKKSEREQELKGQFE-QAMKETVDKFQGLNLYIKNLGDSIDDEKLKELF 332
D++E +VG+AQ+K+ R ++LK +FE + + + +G+NLY+KNL DS+D+ KL+ELF
Sbjct: 255 VDEKELHVGRAQRKTNRTEDLKAKFELEKIIRDMKTRKGMNLYVKNLDDSVDNTKLEELF 314
Query: 333 SEFGTITSCK 342
SEFGTITSCK
Sbjct: 315 SEFGTITSCK 324
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/299 (33%), Positives = 149/299 (49%), Gaps = 22/299 (7%)
Query: 124 NLDKSIDHKALHDTFSSFG-NILSCKIATD-GSGQSKGFGFVQFENKESAQNAIDKLNGM 181
+LD S++ L+ FS F +I S K+ D +G S G+G+V F + A+ A++ LN
Sbjct: 19 DLDSSVEEGDLYTKFSEFTHDISSVKVCCDRNTGLSLGYGYVNFNHSSQAKTAMEVLNYC 78
Query: 182 LINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVM 241
+ K + + ER+ + NVFVKNLDES ++ L +F +G + S V
Sbjct: 79 KLKGKPMRIMF----SERDPSNRMSGRGNVFVKNLDESIDNKQLCDMFSAFGKVLSCKVA 134
Query: 242 RDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQA 301
RD G SK +GFV F + A NG ++ +V + GQ++++
Sbjct: 135 RDASGVSKGYGFVQFYSDLSVYTACNFHNGTLIRNQHIHVCPFVSR--------GQWDKS 186
Query: 302 MKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFST 361
T N+Y+KNL ++ D LK LF EFG ITS VM+D G S+ GFV F
Sbjct: 187 RVFT-------NVYVKNLVETATDADLKRLFGEFGEITSAVVMKDGEGKSRRFGFVNFEK 239
Query: 362 PEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMY 420
E A A+ +MNG ++ K L+V AQRK R L+A+F ++ + M +Y
Sbjct: 240 AEAAVTAIEKMNGVVVDEKELHVGRAQRKTNRTEDLKAKF-ELEKIIRDMKTRKGMNLY 297
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/223 (35%), Positives = 125/223 (56%), Gaps = 17/223 (7%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
+++V +LD ++ + QL D+FS G+VLS +V RD S S GYG+V + + A +
Sbjct: 103 NVFVKNLDESIDNKQLCDMFSAFGKVLSCKVARDASG-VSKGYGFVQFYSDLSVYTACNF 161
Query: 91 LNFTPLNNKSIRIM-YSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKI 149
N T + N+ I + + R + N+++KNL ++ L F FG I S +
Sbjct: 162 HNGTLIRNQHIHVCPFVSRGQWDKSRVFTNVYVKNLVETATDADLKRLFGEFGEITSAVV 221
Query: 150 ATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFN 209
DG G+S+ FGFV FE E+A AI+K+NG+++++K++ VG RK R T +K KF
Sbjct: 222 MKDGEGKSRRFGFVNFEKAEAAVTAIEKMNGVVVDEKELHVGRAQRKTNR-TEDLKAKFE 280
Query: 210 --------------NVFVKNLDESTTDEDLKKIFGEYGTITSA 238
N++VKNLD+S + L+++F E+GTITS
Sbjct: 281 LEKIIRDMKTRKGMNLYVKNLDDSVDNTKLEELFSEFGTITSC 323
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 74/152 (48%), Gaps = 18/152 (11%)
Query: 18 VAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVN 77
V+ G + T++YV +L TD+ L LF + G++ S V +D +S +G+VN
Sbjct: 178 VSRGQWDKSRVFTNVYVKNLVETATDADLKRLFGEFGEITSAVVMKD-GEGKSRRFGFVN 236
Query: 78 YANPADAARALDVLNFTPLNNKSIRIMYSHRDPS--------------IRKSGTG---NI 120
+ A A++ +N ++ K + + + R + IR T N+
Sbjct: 237 FEKAEAAVTAIEKMNGVVVDEKELHVGRAQRKTNRTEDLKAKFELEKIIRDMKTRKGMNL 296
Query: 121 FIKNLDKSIDHKALHDTFSSFGNILSCKIATD 152
++KNLD S+D+ L + FS FG I SCK A +
Sbjct: 297 YVKNLDDSVDNTKLEELFSEFGTITSCKYACN 328
>gi|410988961|ref|XP_004000741.1| PREDICTED: polyadenylate-binding protein 5 [Felis catus]
Length = 382
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 179/359 (49%), Positives = 239/359 (66%), Gaps = 7/359 (1%)
Query: 34 VGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNF 93
VGDLD +VT+ LY F G + R+CRD TR LGYGYVN+ PADA AL+ +NF
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 94 TPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG 153
+N K R+M+S D +RKSG GNIFIKNLDKSID++AL FS+FGNILSCK+ D
Sbjct: 82 DLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDD 141
Query: 154 SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK----FN 209
+G SKG+ +V F++ +A AI +NG+ +N++QV+VG F +ER ++TK F
Sbjct: 142 NG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEER-AAEVRTKDRATFT 199
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEAL 269
NVFVKN + DE LK+IF YG S V+RD GKSK FGFV +E + A KAV L
Sbjct: 200 NVFVKNFGDDMDDEKLKEIFSGYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDL 259
Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLK 329
+GK + + YVG+AQKK ER EL+ +FE+ + + G+ +YIKNL ++IDDEKLK
Sbjct: 260 HGKSINGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETIDDEKLK 319
Query: 330 ELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
E FS FG+I+ KVM + G KG G V FS+ E+A++A+ EMNG+ + SKPL+V + Q
Sbjct: 320 EEFSSFGSISRAKVMVE-VGQGKGFGVVCFSSFEDATKAVDEMNGRTVGSKPLHVTLGQ 377
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 105/300 (35%), Positives = 167/300 (55%), Gaps = 17/300 (5%)
Query: 122 IKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSK-GFGFVQFENKESAQNAIDKLNG 180
+ +LD + L+ F G + +I D +S G+G+V F A+ A++ +N
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 181 MLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVV 240
LIN K + Q + + K+ N+F+KNLD+S + L +F +G I S V
Sbjct: 82 DLINGKPF---RLMWSQPDDRLR-KSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKV 137
Query: 241 MRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQ 300
+ D +G SK + +V+F++ A +A+ +NG + ++R+ YVG+ + ER E++
Sbjct: 138 VCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVR----- 191
Query: 301 AMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFS 360
T D+ N+++KN GD +DDEKLKE+FS +G S KV+RD SG SKG GFV +
Sbjct: 192 ----TKDRATFTNVFVKNFGDDMDDEKLKEIFSGYGPTESVKVIRDASGKSKGFGFVRYE 247
Query: 361 TPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMY 420
T E A +A+ +++GK I K LYV AQ+K ER A L+ +F ++ S PP +P+Y
Sbjct: 248 THEAAQKAVLDLHGKSINGKVLYVGRAQKKIERLAELRRRFERL--RLKEKSRPPGVPIY 305
>gi|301787589|ref|XP_002929210.1| PREDICTED: polyadenylate-binding protein 5-like [Ailuropoda
melanoleuca]
Length = 382
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 178/359 (49%), Positives = 238/359 (66%), Gaps = 7/359 (1%)
Query: 34 VGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNF 93
VGDLD +VT+ LY F G + R+CRD TR LGYGYVN+ PADA AL+ +NF
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 94 TPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG 153
+N K R+M+S D +RKSG GNIFIKNLDK ID++AL FS+FGNILSCK+ D
Sbjct: 82 DLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKCIDNRALFYLFSAFGNILSCKVVCDD 141
Query: 154 SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK----FN 209
+G SKG+ +V F++ +A AI +NG+ +N++QV+VG F +ER ++T+ F
Sbjct: 142 NG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEER-AAEVRTRDRATFT 199
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEAL 269
NVFVKN + DE LK+IF YG S V+RD GKSK FGFV +E + A KAV L
Sbjct: 200 NVFVKNFGDDMDDEKLKEIFSGYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDL 259
Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLK 329
+GK + + YVG+AQKK ER EL+ +FE+ + + G+ +YIKNL ++IDDEKLK
Sbjct: 260 HGKSINGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETIDDEKLK 319
Query: 330 ELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
E FS FG+I+ KVM + G KG G V FS+ EEA++A+ EMNG+ + SKPL+V + Q
Sbjct: 320 EEFSSFGSISRAKVMVE-VGQGKGFGVVCFSSFEEATKAVDEMNGRTVGSKPLHVTLGQ 377
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/300 (34%), Positives = 166/300 (55%), Gaps = 17/300 (5%)
Query: 122 IKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSK-GFGFVQFENKESAQNAIDKLNG 180
+ +LD + L+ F G + +I D +S G+G+V F A+ A++ +N
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 181 MLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVV 240
LIN K + Q + + K+ N+F+KNLD+ + L +F +G I S V
Sbjct: 82 DLINGKPF---RLMWSQPDDRLR-KSGVGNIFIKNLDKCIDNRALFYLFSAFGNILSCKV 137
Query: 241 MRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQ 300
+ D +G SK + +V+F++ A +A+ +NG + ++R+ YVG+ + ER E++
Sbjct: 138 VCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVR----- 191
Query: 301 AMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFS 360
T D+ N+++KN GD +DDEKLKE+FS +G S KV+RD SG SKG GFV +
Sbjct: 192 ----TRDRATFTNVFVKNFGDDMDDEKLKEIFSGYGPTESVKVIRDASGKSKGFGFVRYE 247
Query: 361 TPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMY 420
T E A +A+ +++GK I K LYV AQ+K ER A L+ +F ++ S PP +P+Y
Sbjct: 248 THEAAQKAVLDLHGKSINGKVLYVGRAQKKIERLAELRRRFERL--RLKEKSRPPGVPIY 305
>gi|281345691|gb|EFB21275.1| hypothetical protein PANDA_019324 [Ailuropoda melanoleuca]
Length = 381
Score = 317 bits (813), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 178/359 (49%), Positives = 238/359 (66%), Gaps = 7/359 (1%)
Query: 34 VGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNF 93
VGDLD +VT+ LY F G + R+CRD TR LGYGYVN+ PADA AL+ +NF
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 94 TPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG 153
+N K R+M+S D +RKSG GNIFIKNLDK ID++AL FS+FGNILSCK+ D
Sbjct: 82 DLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKCIDNRALFYLFSAFGNILSCKVVCDD 141
Query: 154 SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK----FN 209
+G SKG+ +V F++ +A AI +NG+ +N++QV+VG F +ER ++T+ F
Sbjct: 142 NG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEER-AAEVRTRDRATFT 199
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEAL 269
NVFVKN + DE LK+IF YG S V+RD GKSK FGFV +E + A KAV L
Sbjct: 200 NVFVKNFGDDMDDEKLKEIFSGYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDL 259
Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLK 329
+GK + + YVG+AQKK ER EL+ +FE+ + + G+ +YIKNL ++IDDEKLK
Sbjct: 260 HGKSINGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETIDDEKLK 319
Query: 330 ELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
E FS FG+I+ KVM + G KG G V FS+ EEA++A+ EMNG+ + SKPL+V + Q
Sbjct: 320 EEFSSFGSISRAKVMVE-VGQGKGFGVVCFSSFEEATKAVDEMNGRTVGSKPLHVTLGQ 377
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/300 (34%), Positives = 166/300 (55%), Gaps = 17/300 (5%)
Query: 122 IKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSK-GFGFVQFENKESAQNAIDKLNG 180
+ +LD + L+ F G + +I D +S G+G+V F A+ A++ +N
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 181 MLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVV 240
LIN K + Q + + K+ N+F+KNLD+ + L +F +G I S V
Sbjct: 82 DLINGKPF---RLMWSQPDDRLR-KSGVGNIFIKNLDKCIDNRALFYLFSAFGNILSCKV 137
Query: 241 MRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQ 300
+ D +G SK + +V+F++ A +A+ +NG + ++R+ YVG+ + ER E++
Sbjct: 138 VCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVR----- 191
Query: 301 AMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFS 360
T D+ N+++KN GD +DDEKLKE+FS +G S KV+RD SG SKG GFV +
Sbjct: 192 ----TRDRATFTNVFVKNFGDDMDDEKLKEIFSGYGPTESVKVIRDASGKSKGFGFVRYE 247
Query: 361 TPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMY 420
T E A +A+ +++GK I K LYV AQ+K ER A L+ +F ++ S PP +P+Y
Sbjct: 248 THEAAQKAVLDLHGKSINGKVLYVGRAQKKIERLAELRRRFERL--RLKEKSRPPGVPIY 305
>gi|300796236|ref|NP_001179218.1| polyadenylate-binding protein 5 [Bos taurus]
gi|296471041|tpg|DAA13156.1| TPA: poly(A) binding protein, cytoplasmic 5 [Bos taurus]
gi|440903676|gb|ELR54310.1| Polyadenylate-binding protein 5 [Bos grunniens mutus]
Length = 382
Score = 317 bits (813), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 177/359 (49%), Positives = 240/359 (66%), Gaps = 7/359 (1%)
Query: 34 VGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNF 93
VGDLD +VT+ LY F G + R+CRD TR LGYGYVN+ PADA AL+ +NF
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 94 TPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG 153
+N K R+M+S D +RKSG GNIFIKNLDKSID++AL FS+FG+ILSCK+ D
Sbjct: 82 DLINGKPFRLMWSQPDDRLRKSGIGNIFIKNLDKSIDNRALFYLFSAFGSILSCKVVCDD 141
Query: 154 SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK----FN 209
+G SKG+ +V F++ +A AI +NG+ +N++QV+VG F +ER ++T+ F
Sbjct: 142 NG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEER-AAEVRTRDKATFT 199
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEAL 269
NVFVKN + D+ LK++F EYG S V+RD GKSK FGFV +E + A KAV L
Sbjct: 200 NVFVKNFGDDMDDDKLKELFSEYGPTESVKVIRDSSGKSKGFGFVRYETHEAAQKAVLDL 259
Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLK 329
+GK D + YVG+AQKK ER EL+ +FE+ + + G+ +YIKNL ++IDDEKLK
Sbjct: 260 HGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETIDDEKLK 319
Query: 330 ELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
E FS FG+I+ KVM + G KG G + FS+ EEA++A+ EMNG+++ SKPL V + Q
Sbjct: 320 EEFSSFGSISRAKVMVE-VGQGKGFGVICFSSFEEATKAVDEMNGRIVGSKPLQVTLGQ 377
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 107/300 (35%), Positives = 169/300 (56%), Gaps = 17/300 (5%)
Query: 122 IKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSK-GFGFVQFENKESAQNAIDKLNG 180
+ +LD + L+ F G + +I D +S G+G+V F A+ A++ +N
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 181 MLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVV 240
LIN K + Q + + K+ N+F+KNLD+S + L +F +G+I S V
Sbjct: 82 DLINGKPF---RLMWSQPDDRLR-KSGIGNIFIKNLDKSIDNRALFYLFSAFGSILSCKV 137
Query: 241 MRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQ 300
+ D +G SK + +V+F++ A +A+ +NG + ++R+ YVG+ + ER E++
Sbjct: 138 VCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVR----- 191
Query: 301 AMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFS 360
T DK N+++KN GD +DD+KLKELFSE+G S KV+RD SG SKG GFV +
Sbjct: 192 ----TRDKATFTNVFVKNFGDDMDDDKLKELFSEYGPTESVKVIRDSSGKSKGFGFVRYE 247
Query: 361 TPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMY 420
T E A +A+ +++GK I K LYV AQ+K ER A L+ +F ++ S PP +P+Y
Sbjct: 248 THEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERL--RLKEKSRPPGVPIY 305
>gi|431922856|gb|ELK19640.1| Polyadenylate-binding protein 5 [Pteropus alecto]
Length = 373
Score = 317 bits (813), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 177/355 (49%), Positives = 236/355 (66%), Gaps = 8/355 (2%)
Query: 34 VGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNF 93
VGDLD +VT+ LY F G + R+CRD TR LGYGYVN+ PADA AL+ +NF
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 94 TPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG 153
+N K R+M+S D +RKSG GNIFIKNLDKSID++AL FS+FGNILSCK+ D
Sbjct: 82 DLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDD 141
Query: 154 SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFV 213
+G SKG+ +V F++ +A AI +NG+ +N++QV+ +R ++R T F NVFV
Sbjct: 142 NG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYRAAEVRTRDRAT------FTNVFV 194
Query: 214 KNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKK 273
KN + DE LK IF EYG S V+RD GKSK FGFV +E + A KAV L+GK
Sbjct: 195 KNFGDDMDDEKLKDIFSEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKS 254
Query: 274 FDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFS 333
D + YVG+AQKK ER EL+ +FE+ + + G+ +YIKNL ++IDDEKLKE FS
Sbjct: 255 IDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPVYIKNLDETIDDEKLKEEFS 314
Query: 334 EFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
FG+I+ KVM + G KG G V +S+ EEA++A+ EMNG+++ SKPL+V + Q
Sbjct: 315 SFGSISRAKVMVE-VGQGKGFGVVCYSSFEEATKAVDEMNGRIMGSKPLHVTLGQ 368
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 102/300 (34%), Positives = 163/300 (54%), Gaps = 26/300 (8%)
Query: 122 IKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSK-GFGFVQFENKESAQNAIDKLNG 180
+ +LD + L+ F G + +I D +S G+G+V F A+ A++ +N
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 181 MLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVV 240
LIN K + Q + + K+ N+F+KNLD+S + L +F +G I S V
Sbjct: 82 DLINGKPF---RLMWSQPDDRLR-KSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKV 137
Query: 241 MRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQ 300
+ D +G SK + +V+F++ A +A+ +NG + ++R+ Y R E++
Sbjct: 138 VCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVY---------RAAEVR----- 182
Query: 301 AMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFS 360
T D+ N+++KN GD +DDEKLK++FSE+G S KV+RD SG SKG GFV +
Sbjct: 183 ----TRDRATFTNVFVKNFGDDMDDEKLKDIFSEYGPTESVKVIRDASGKSKGFGFVRYE 238
Query: 361 TPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMY 420
T E A +A+ +++GK I K LYV AQ+K ER A L+ +F ++ S PP +P+Y
Sbjct: 239 THEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERL--RLKEKSRPPGVPVY 296
>gi|74008013|ref|XP_549122.2| PREDICTED: polyadenylate-binding protein 5 [Canis lupus familiaris]
Length = 382
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 178/359 (49%), Positives = 238/359 (66%), Gaps = 7/359 (1%)
Query: 34 VGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNF 93
VGDLD +VT+ LY F G + R+CRD TR LGYGYVN+ PADA AL+ +NF
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 94 TPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG 153
+N K R+M+S D +RKSG GNIFIKNLDKSID++AL FS+FGNILSCK+ D
Sbjct: 82 DLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDD 141
Query: 154 SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK----FN 209
+G SKG+ +V F++ +A AI +NG+ +N++QV+VG F +ER ++T+ F
Sbjct: 142 NG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEER-AAEVRTRDRATFT 199
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEAL 269
NVFVKN DE LK+IF YG S V+RD GKSK FGFV +E + A KAV L
Sbjct: 200 NVFVKNFGNDMDDEKLKEIFSGYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDL 259
Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLK 329
+GK + + YVG+AQKK ER EL+ +FE+ + + G+ +YIKNL ++IDDEKLK
Sbjct: 260 HGKSINGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETIDDEKLK 319
Query: 330 ELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
E FS FG+I+ KVM + G KG G V FS+ E+A++A+ EMNG+ + SKPL+V + Q
Sbjct: 320 EEFSSFGSISRAKVMVE-VGQGKGFGVVCFSSFEDATKAVDEMNGRTVGSKPLHVTLGQ 377
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/300 (34%), Positives = 167/300 (55%), Gaps = 17/300 (5%)
Query: 122 IKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSK-GFGFVQFENKESAQNAIDKLNG 180
+ +LD + L+ F G + +I D +S G+G+V F A+ A++ +N
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 181 MLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVV 240
LIN K + Q + + K+ N+F+KNLD+S + L +F +G I S V
Sbjct: 82 DLINGKPF---RLMWSQPDDRLR-KSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKV 137
Query: 241 MRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQ 300
+ D +G SK + +V+F++ A +A+ +NG + ++R+ YVG+ + ER E++
Sbjct: 138 VCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVR----- 191
Query: 301 AMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFS 360
T D+ N+++KN G+ +DDEKLKE+FS +G S KV+RD SG SKG GFV +
Sbjct: 192 ----TRDRATFTNVFVKNFGNDMDDEKLKEIFSGYGPTESVKVIRDASGKSKGFGFVRYE 247
Query: 361 TPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMY 420
T E A +A+ +++GK I K LYV AQ+K ER A L+ +F ++ S PP +P+Y
Sbjct: 248 THEAAQKAVLDLHGKSINGKVLYVGRAQKKIERLAELRRRFERL--RLKEKSRPPGVPIY 305
>gi|426257905|ref|XP_004022562.1| PREDICTED: polyadenylate-binding protein 5-like [Ovis aries]
Length = 382
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 177/359 (49%), Positives = 239/359 (66%), Gaps = 7/359 (1%)
Query: 34 VGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNF 93
VGDLD +VT+ LY F G + R+CRD TR LGYGYVN+ PADA AL+ +NF
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 94 TPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG 153
+N K R+M+S D +RKSG GNIFIKNLDKSID++AL FS+FG+ILSCK+ D
Sbjct: 82 DLINGKPFRLMWSQPDDRLRKSGIGNIFIKNLDKSIDNRALFYLFSAFGSILSCKVVCDD 141
Query: 154 SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK----FN 209
+G SKG+ +V F++ +A AI +NG+ +N++QV+VG F +ER ++T+ F
Sbjct: 142 NG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEER-AAEVRTRDRATFT 199
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEAL 269
NVFVKN + D+ LK++F EYG S V+RD GKSK FGFV +E + A KAV L
Sbjct: 200 NVFVKNFGDDMDDDKLKELFSEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDL 259
Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLK 329
+GK D + YVG+AQKK ER EL+ +FE+ + + G+ +YIKNL ++IDDEKLK
Sbjct: 260 HGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKTRPPGVPIYIKNLDETIDDEKLK 319
Query: 330 ELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
E FS FG+I+ KVM + KG G V FS+ EEA++A+ EMNG+++ SKPL V + Q
Sbjct: 320 EEFSSFGSISRAKVMVEVEQ-GKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLQVTLGQ 377
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 105/300 (35%), Positives = 169/300 (56%), Gaps = 17/300 (5%)
Query: 122 IKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSK-GFGFVQFENKESAQNAIDKLNG 180
+ +LD + L+ F G + +I D +S G+G+V F A+ A++ +N
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 181 MLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVV 240
LIN K + Q + + K+ N+F+KNLD+S + L +F +G+I S V
Sbjct: 82 DLINGKPF---RLMWSQPDDRLR-KSGIGNIFIKNLDKSIDNRALFYLFSAFGSILSCKV 137
Query: 241 MRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQ 300
+ D +G SK + +V+F++ A +A+ +NG + ++R+ YVG+ + ER E++
Sbjct: 138 VCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVR----- 191
Query: 301 AMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFS 360
T D+ N+++KN GD +DD+KLKELFSE+G S KV+RD SG SKG GFV +
Sbjct: 192 ----TRDRATFTNVFVKNFGDDMDDDKLKELFSEYGPTESVKVIRDASGKSKGFGFVRYE 247
Query: 361 TPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMY 420
T E A +A+ +++GK I K LYV AQ+K ER A L+ +F ++ + PP +P+Y
Sbjct: 248 THEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERL--RLKEKTRPPGVPIY 305
>gi|71659594|ref|XP_821518.1| polyadenylate-binding protein 1 [Trypanosoma cruzi strain CL
Brener]
gi|70886900|gb|EAN99667.1| polyadenylate-binding protein 1, putative [Trypanosoma cruzi]
Length = 570
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 162/385 (42%), Positives = 242/385 (62%), Gaps = 19/385 (4%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
SLYVGDLD VT+ L +LF G +L+VRVCRD+ T+RSLGYGYVN+ + AA+A+
Sbjct: 28 VASLYVGDLDPVVTEPHLVELFKPFGTILNVRVCRDIITQRSLGYGYVNFNSHDSAAKAM 87
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LNF + +K +RIM+ RDP++R SG GNIF+KNL +D + L F FG+ILSCK
Sbjct: 88 EALNFKRVGDKCMRIMWQQRDPTLRYSGNGNIFVKNLKNEVDSRELSVIFKKFGDILSCK 147
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQ-----VFVGHFLRKQERETVA 203
+ D G+S+G+GFV F+N +A+ AI+ +NG + + ++V +F+R+ R
Sbjct: 148 VMEDEEGKSRGYGFVHFKNDNAAKEAIENMNGEKDHADEEKKMGLYVANFIRRNARLATL 207
Query: 204 IKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAA 263
+ F NV++K + + E ++K F ++G ITS+ +D +G + F F NFE +DA
Sbjct: 208 V-ANFTNVYIKQVLPTVDKEVIEKFFSKFGGITSSATCKDKNG--RVFAFCNFEKHEDAV 264
Query: 264 KAVEALNGKKFD-----DREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKN 318
KA+EA + + D + YV +AQ +SER L+ ++ Q +T+ G NLY++N
Sbjct: 265 KAIEASHEQFVDGVVPPGEKLYVQRAQPRSERLIALRQKYMQC--QTL----GNNLYVRN 318
Query: 319 LGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIV 378
+E L ELF E+G I SC+VM D +G S+G GFV+F ++A+ AL EMNG+M+
Sbjct: 319 FDPEFTEENLHELFKEYGVIRSCRVMTDANGNSRGFGFVSFENADQANAALREMNGRMLN 378
Query: 379 SKPLYVAVAQRKEERRARLQAQFSQ 403
KPL V +AQR+++R L+ QF Q
Sbjct: 379 GKPLIVNIAQRRDQRFMMLRLQFQQ 403
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 305 TVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRD-PSGISKGSGFVAFSTPE 363
T Q +LY+ +L + + L ELF FGTI + +V RD + S G G+V F++ +
Sbjct: 22 TTKALQVASLYVGDLDPVVTEPHLVELFKPFGTILNVRVCRDIITQRSLGYGYVNFNSHD 81
Query: 364 EASRALAEMNGKMIVSKPLYVAVAQR 389
A++A+ +N K + K + + QR
Sbjct: 82 SAAKAMEALNFKRVGDKCMRIMWQQR 107
Score = 46.2 bits (108), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 26 QFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAA 85
Q L +LYV + D T+ L++LF + G + S RV D + S G+G+V++ N A
Sbjct: 308 QTLGNNLYVRNFDPEFTEENLHELFKEYGVIRSCRVMTD-ANGNSRGFGFVSFENADQAN 366
Query: 86 RALDVLNFTPLNNKSIRIMYSHR 108
AL +N LN K + + + R
Sbjct: 367 AALREMNGRMLNGKPLIVNIAQR 389
>gi|307207781|gb|EFN85399.1| Polyadenylate-binding protein 1 [Harpegnathos saltator]
Length = 552
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 154/301 (51%), Positives = 205/301 (68%), Gaps = 30/301 (9%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL ++T++ L++ FS G VLS+RVCRD+ TRRSLGY YVN+ PADA RALD
Sbjct: 12 SLYVGDLHTDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF + + IRIM+S RDPS+RKSG GN+FIKNLDK+ID+KA++DTFS+FGNILSCK+A
Sbjct: 72 MNFDMIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVA 131
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERE---------- 200
D SG SKG+GFV FE +E+A +IDK+NGML+N K+V+VG F+ ++ERE
Sbjct: 132 QDESGASKGYGFVHFETEEAANKSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLF 191
Query: 201 ------TVAIKTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVM 241
+K KF N++VKNLD++ DE L+K F +GTITSA VM
Sbjct: 192 TNVYVKNFELKRKFEQLKIERLNRYQGVNLYVKNLDDTIDDERLRKEFTPFGTITSAKVM 251
Query: 242 RDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQA 301
+ +G+SK FGFV F ++A KAV +NG+ + YV AQ+K +R+ L Q+ Q
Sbjct: 252 ME-EGRSKGFGFVCFSQPEEATKAVTEMNGRIVGSKPLYVALAQRKEDRKAHLASQYMQR 310
Query: 302 M 302
M
Sbjct: 311 M 311
Score = 275 bits (702), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 188/559 (33%), Positives = 290/559 (51%), Gaps = 118/559 (21%)
Query: 118 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAID 176
++++ +L I L + FSS G +LS ++ D + +S G+ +V F+ A+ A+D
Sbjct: 11 ASLYVGDLHTDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 177 KLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTIT 236
+N +I + + + +R+ K+ NVF+KNLD++ ++ + F +G I
Sbjct: 71 TMNFDMIKGRPIRIMW----SQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNIL 126
Query: 237 SAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQEL-- 294
S V +D G SK +GFV+FE + A K+++ +NG + ++ YVGK + ERE+EL
Sbjct: 127 SCKVAQDESGASKGYGFVHFETEEAANKSIDKVNGMLLNGKKVYVGKFIPRKEREKELGE 186
Query: 295 ---------------KGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTIT 339
K +FEQ E ++++QG+NLY+KNL D+IDDE+L++ F+ FGTIT
Sbjct: 187 KAKLFTNVYVKNFELKRKFEQLKIERLNRYQGVNLYVKNLDDTIDDERLRKEFTPFGTIT 246
Query: 340 SCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQA 399
S KVM + G SKG GFV FS PEEA++A+ EMNG+++ SKPLYVA+AQRKE+R+A L +
Sbjct: 247 SAKVMME-EGRSKGFGFVCFSQPEEATKAVTEMNGRIVGSKPLYVALAQRKEDRKAHLAS 305
Query: 400 QF----SQMRPVAMG-------------PSVP-----------------PRMPMYP---- 421
Q+ + +R MG P++P PR P P
Sbjct: 306 QYMQRMANVRMQQMGQIFQPGNAGSYFVPTLPQPQRFYGPAQMAQIRATPRWPAQPNQVR 365
Query: 422 ----PGPSGL------------------------------GQQFLYG-------QAPPAI 440
G SG GQQ + G A PA+
Sbjct: 366 PNAQTGSSGFAMQAPFRAAPRAPAAQAGAMRNTLSARPITGQQAVGGANMQSRSMAGPAV 425
Query: 441 -IPPQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITAL 499
+ PQ P + Y NM++ P M + PV ++ + P+TA
Sbjct: 426 GVSPQSRPSNYKYT----ANMRNPPQTMPMPAQAPV---------QQAVHIQGQEPLTA- 471
Query: 500 STALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAK 559
+ LA A P++Q+ +LGE L+PL++ + K+TGMLLE+D +E+LH+LE E+LKAK
Sbjct: 472 -SMLAAAPPQEQKQMLGERLFPLIQCMYPALTGKITGMLLEIDNSELLHMLEHSESLKAK 530
Query: 560 VAEAMEVLRSVAQQQANNP 578
V EA+ VL++ +QAN P
Sbjct: 531 VEEAVAVLQAHQAKQANQP 549
Score = 45.8 bits (107), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
N++ +LYV +LD + D +L F+ G + S +V + RS G+G+V ++ P +A
Sbjct: 214 NRYQGVNLYVKNLDDTIDDERLRKEFTPFGTITSAKVM--MEEGRSKGFGFVCFSQPEEA 271
Query: 85 ARALDVLNFTPLNNKSIRIMYSHR 108
+A+ +N + +K + + + R
Sbjct: 272 TKAVTEMNGRIVGSKPLYVALAQR 295
>gi|71659778|ref|XP_821609.1| poly(A)-binding protein [Trypanosoma cruzi strain CL Brener]
gi|459650|gb|AAC46487.1| poly(A) binding protein [Trypanosoma cruzi]
gi|515321|gb|AAC46489.1| poly(A) binding protein [Trypanosoma cruzi]
gi|2854066|gb|AAC02537.1| poly(A)-binding protein [Trypanosoma cruzi]
gi|2854068|gb|AAC02538.1| poly(A)-binding protein [Trypanosoma cruzi]
gi|70886993|gb|EAN99758.1| poly(A)-binding protein, putative [Trypanosoma cruzi]
gi|407408287|gb|EKF31789.1| poly(A)-binding protein, putative,polyadenylate-binding protein,
putative [Trypanosoma cruzi marinkellei]
gi|407847529|gb|EKG03215.1| poly(A)-binding protein, putative,polyadenylate-binding protein,
putative [Trypanosoma cruzi]
Length = 550
Score = 311 bits (796), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 217/587 (36%), Positives = 300/587 (51%), Gaps = 102/587 (17%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
S++VG LD N+ + +LYD F ++G V SVRVC D T++SLGYGYVN+ NPADA +ALD
Sbjct: 10 SIWVGGLDPNLNEQKLYDHFVRLGPVASVRVCVDSVTQKSLGYGYVNFQNPADAEKALDQ 69
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
L +K IRI RDPS R+SG NI +K L S+D AL + FS +G + + +A
Sbjct: 70 AGVK-LGSKHIRIAKIQRDPSKRRSGVTNIVVKKLPPSVDTYALKEMFSKYGRLTAIGLA 128
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNN 210
T+ +G+S+G+ + +E +ESA A+ ++NGM+I+D + V + E + +F N
Sbjct: 129 TNENGESRGYARISYEKEESAIQAVQEVNGMVIDDCAITVERYQPHHREEQL---KQFTN 185
Query: 211 VFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALN 270
++VKNLD S DE LK++F +G +TSA V G ++ F +V + + AAKAVE L
Sbjct: 186 LYVKNLDPSVNDEKLKEVFSAFGEVTSAKVRDLGANQTVGFAYVAYATHEAAAKAVEEL- 244
Query: 271 GKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGL------------------ 312
D++E + K + MK +V +F+
Sbjct: 245 ----DEKESPLAK----------------EGMKLSVCRFRSRDERQRERERLRRERQQQH 284
Query: 313 ----NLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRD-PSGISKGSGFVAFSTPEEASR 367
NLY+KN D++ E+LKELF G S VM D + +S+ GFV+F ASR
Sbjct: 285 SKYPNLYVKNFDDTVTSERLKELFERCGETVSVSVMMDRATRVSRCFGFVSFKEQSAASR 344
Query: 368 ALAEMNGKMIVS-KPLYVAVAQRKEERRARLQ-----------------------AQFSQ 403
A+ E++G + +PL+V A RK+ RR L+ Q
Sbjct: 345 AIQELHGSTALGPRPLFVTYALRKDARRQTLEDMRNKQPRMRQPPMGSLMGGMMGPQLGF 404
Query: 404 MRPVAMGPSVP---PRMPMYPPGPSGLGQQFLYGQAPPAIIPPQMPPRGHAYRYPLGRNM 460
M P AM VP PRM M P P G+G GQ P P R
Sbjct: 405 MGPQAMFNGVPFVNPRMSMM-PTPMGMG-----GQLRPMGPTPMNQVRARPMPQ------ 452
Query: 461 QDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLY 520
M P P P+ AS GQ LST LAN +PEQQ+ +LGE LY
Sbjct: 453 ----RPPMQPIMAPPPQ------PQSLASQGQ-----NLSTVLANLTPEQQKNVLGERLY 497
Query: 521 PLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVL 567
+ + AAAKVTGMLLEMD E+L+LL++P L AKV EA+EVL
Sbjct: 498 NHIVAINPAAAAKVTGMLLEMDNGEILNLLDTPGLLDAKVQEALEVL 544
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 101/189 (53%), Gaps = 20/189 (10%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
T+LYV +LD +V D +L ++FS G+V S +V RDL +++G+ YV YA AA+A++
Sbjct: 184 TNLYVKNLDPSVNDEKLKEVFSAFGEVTSAKV-RDLGANQTVGFAYVAYATHEAAAKAVE 242
Query: 90 VLN--FTPLNNKSIRIMYSH---------------RDPSIRKSGTGNIFIKNLDKSIDHK 132
L+ +PL + +++ R+ + S N+++KN D ++ +
Sbjct: 243 ELDEKESPLAKEGMKLSVCRFRSRDERQRERERLRRERQQQHSKYPNLYVKNFDDTVTSE 302
Query: 133 ALHDTFSSFGNILSCKIATDGSGQ-SKGFGFVQFENKESAQNAIDKLNG-MLINDKQVFV 190
L + F G +S + D + + S+ FGFV F+ + +A AI +L+G + + +FV
Sbjct: 303 RLKELFERCGETVSVSVMMDRATRVSRCFGFVSFKEQSAASRAIQELHGSTALGPRPLFV 362
Query: 191 GHFLRKQER 199
+ LRK R
Sbjct: 363 TYALRKDAR 371
>gi|194386842|dbj|BAG59787.1| unnamed protein product [Homo sapiens]
Length = 350
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 172/347 (49%), Positives = 233/347 (67%), Gaps = 7/347 (2%)
Query: 46 LYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMY 105
LY F G + R+CRD TR LGYGYVN+ PADA AL+ +NF +N K R+M+
Sbjct: 2 LYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNFDLINGKPFRLMW 61
Query: 106 SHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQF 165
S D +RKSG GNIFIKNLDKSID++AL FS+FGNILSCK+ D +G SKG+ +V F
Sbjct: 62 SQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNG-SKGYAYVHF 120
Query: 166 ENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK----FNNVFVKNLDESTT 221
++ +A AI +NG+ +N++QV+VG F +ER ++T+ F NVFVKN+ +
Sbjct: 121 DSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEER-AAEVRTRDRATFTNVFVKNIGDDID 179
Query: 222 DEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYV 281
DE LK++F EYG S V+RD GKSK FGFV +E + A KAV L+GK D + YV
Sbjct: 180 DEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYV 239
Query: 282 GKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSC 341
G+AQKK ER EL+ +FE+ + + G+ +YIKNL ++I+DEKLKE FS FG+I+
Sbjct: 240 GRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLKEEFSSFGSISRA 299
Query: 342 KVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
KVM + G KG G V FS+ EEA++A+ EMNG+++ SKPL+V + Q
Sbjct: 300 KVMME-VGQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLGQ 345
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 105/288 (36%), Positives = 163/288 (56%), Gaps = 17/288 (5%)
Query: 134 LHDTFSSFGNILSCKIATDGSGQSK-GFGFVQFENKESAQNAIDKLNGMLINDKQVFVGH 192
L+ F G + +I D +S G+G+V F A+ A++ +N LIN K
Sbjct: 2 LYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNFDLINGKPF---R 58
Query: 193 FLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFG 252
+ Q + + K+ N+F+KNLD+S + L +F +G I S V+ D +G SK +
Sbjct: 59 LMWSQPDDRLR-KSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNG-SKGYA 116
Query: 253 FVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGL 312
+V+F++ A +A+ +NG + ++R+ YVG+ + ER E++ T D+
Sbjct: 117 YVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVR---------TRDRATFT 167
Query: 313 NLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEM 372
N+++KN+GD IDDEKLKELF E+G S KV+RD SG SKG GFV + T E A +A+ ++
Sbjct: 168 NVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDL 227
Query: 373 NGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMY 420
+GK I K LYV AQ+K ER A L+ +F ++ S PP +P+Y
Sbjct: 228 HGKSIDGKVLYVGRAQKKIERLAELRRRFERL--RLKEKSRPPGVPIY 273
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/280 (32%), Positives = 155/280 (55%), Gaps = 26/280 (9%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVR-VCRDLSTRRSLGYGYVNYANPADAARALD 89
++++ +LD ++ + L+ LFS G +LS + VC D ++ GY YV++ + A A RA+
Sbjct: 75 NIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNGSK---GYAYVHFDSLAAANRAIW 131
Query: 90 VLNFTPLNNKSIRI----MYSHRDPSIR---KSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
+N LNN+ + + R +R ++ N+F+KN+ ID + L + F +G
Sbjct: 132 HMNGVRLNNRQVYVGRFKFPEERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYG 191
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 202
S K+ D SG+SKGFGFV++E E+AQ A+ L+G I+ K ++VG +K ER
Sbjct: 192 PTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAE 251
Query: 203 AIKTKFNN------------VFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKC 250
+ +++KNLDE+ DE LK+ F +G+I+ A VM + G+ K
Sbjct: 252 LRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLKEEFSSFGSISRAKVMME-VGQGKG 310
Query: 251 FGFVNFENADDAAKAVEALNGKKFDDREWYV--GKAQKKS 288
FG V F + ++A KAV+ +NG+ + +V G+A+++
Sbjct: 311 FGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLGQARRRC 350
>gi|167527097|ref|XP_001747881.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773630|gb|EDQ87268.1| predicted protein [Monosiga brevicollis MX1]
Length = 553
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 171/379 (45%), Positives = 244/379 (64%), Gaps = 10/379 (2%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVG-QVLSVRVCRDLSTRRSLGYGYVNYANPADAARA 87
+ SLYVGDL +V +++LY+ F+ G V SVRVCRD+ T+ SLGYGYVN+A P DAA+
Sbjct: 28 SASLYVGDLSKDVIEAELYNFFNSFGATVQSVRVCRDMVTQTSLGYGYVNFATPEDAAKV 87
Query: 88 LDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSC 147
+ NF L + +RIM+S RDP+ R+SG GNIFIKNL +D+KAL+DTF FG +LSC
Sbjct: 88 YEAANFEELKGQPVRIMFSERDPTKRRSGVGNIFIKNLSAEVDNKALYDTFRVFGTVLSC 147
Query: 148 KIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK 207
++ D G S+G FVQ+E+ E A+ I ++N I DK V V + +++R A +T+
Sbjct: 148 RVLYDQEGNSRGIAFVQYEDAEVAKQVIAQVNDKKILDKVVKVEAYKPRRQRMLEAEETQ 207
Query: 208 --FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVM-RDGDGKSKCFGFVNFENADDAAK 264
F NVF KN+ +DED+ K F +G I S V+ D G+ +GFV +++ DA K
Sbjct: 208 KNFTNVFFKNVAADISDEDIMKEFENFGEIESKVLKSHDQFGR---YGFVAYKDTADAQK 264
Query: 265 AVEALNGKKF--DDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDS 322
AV LN K D + YV +AQ+KSER L+ +FE+ E K++ NLYIKN +
Sbjct: 265 AVSELNDKPLGADGTKLYVARAQRKSERMGRLRREFERRRTEMRAKYKDANLYIKNFSED 324
Query: 323 IDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS-KP 381
+ +++L+++F +GTI S +V++D G S+ GFV FS+ EEA+RA+ EMNG+M KP
Sbjct: 325 VTEDELRKMFEAYGTIVSVRVVKDRDGQSRQFGFVLFSSEEEATRAIQEMNGRMTADGKP 384
Query: 382 LYVAVAQRKEERRARLQAQ 400
LYV+ + KEER +Q Q
Sbjct: 385 LYVSRFRNKEERAQEVQRQ 403
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 34/54 (62%)
Query: 514 LLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVL 567
+LG L+ LV+ + A K+TGMLL+ VL LE+P ALKA + +A +VL
Sbjct: 490 VLGNPLFSLVQAQQPKHAPKITGMLLDQPDEAVLEYLENPAALKAALDQAYKVL 543
>gi|342183555|emb|CCC93035.1| poly(A)-binding protein 1 [Trypanosoma congolense IL3000]
Length = 557
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 211/567 (37%), Positives = 296/567 (52%), Gaps = 55/567 (9%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
S++VG LD N+ + +LYD F +VG V SVRVC D T++SLGYGYVN+ NPADA +ALD
Sbjct: 10 SIWVGGLDPNLNEQKLYDHFVRVGPVASVRVCVDTVTQKSLGYGYVNFQNPADAEKALDQ 69
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
L K IRI RDPS R+SG NI +K L ++D AL + FS FG + + +A
Sbjct: 70 AGVK-LGTKHIRIAKIQRDPSKRRSGVTNIVVKKLPSTVDTYALKEMFSKFGRLTAIGLA 128
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNN 210
TD G+S+G+ + +E +ESA A+ +LNG+ I+D + V + E + ++ N
Sbjct: 129 TDEKGESRGYARISYEKEESAVEAVRELNGVSIDDCSITVERYQPHHREEQL---KQYTN 185
Query: 211 VFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALN 270
++VKNLD S DE LK++F ++G +TSA V G+ S F +V + + AAKAVE L+
Sbjct: 186 LYVKNLDPSVDDEKLKEVFAKFGEVTSAKVRDLGNNSSVGFAYVAYATHEAAAKAVEELD 245
Query: 271 GKKFD-DREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLK 329
K +E + RE+ + + + + NLY+KN D++ EKLK
Sbjct: 246 EKSSTLAKEGMKLSVCRFRSREERQRERERVRRERQQQHGKYPNLYVKNFDDTVTSEKLK 305
Query: 330 ELFSEFGTITSCKVMRDPSG-ISKGSGFVAFSTPEEASRALAEMNGKMIVS-KPLYVAVA 387
ELF FG S VM D + +S+ GFV+F AS+A+ E++G + +PL+V A
Sbjct: 306 ELFERFGETVSVSVMMDKATQVSRCFGFVSFKEQSAASQAIQELHGSTALGPRPLFVTYA 365
Query: 388 QRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGP--SGLGQQFLYGQAPPAIIP--P 443
RK+ RR L+ ++ PRM P G SG+ L PP + P
Sbjct: 366 LRKDARRQTLEDIRNKQ----------PRMRQPPMGGLMSGMMAPQLGFMNPPTMFNGLP 415
Query: 444 QMPPRGHAYRYPLGRNMQDFPFDMGAGS----MLPVPVDMGAGIPRRDASVGQPMPITA- 498
M PR M P MG G M P P++ P Q M
Sbjct: 416 FMNPR-----------MPMMPSAMGMGGPMRPMAPAPMNQVRARPAPQRPPMQAMMAPQQ 464
Query: 499 ------------------LSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLE 540
LST LA+ PEQQ+ +LGE LY + + AAKVTGMLLE
Sbjct: 465 QPQLHPQQPQPPVPQGHNLSTMLASLPPEQQKNVLGERLYNYIVRNNPSVAAKVTGMLLE 524
Query: 541 MDQTEVLHLLESPEALKAKVAEAMEVL 567
MD +E+L+LL+SP L KV EA++VL
Sbjct: 525 MDNSEILNLLDSPSMLDTKVQEALDVL 551
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 98/189 (51%), Gaps = 20/189 (10%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
T+LYV +LD +V D +L ++F++ G+V S +V RDL S+G+ YV YA AA+A++
Sbjct: 184 TNLYVKNLDPSVDDEKLKEVFAKFGEVTSAKV-RDLGNNSSVGFAYVAYATHEAAAKAVE 242
Query: 90 VLN--FTPLNNKSIRIMYSHRDPSIRKSGTG---------------NIFIKNLDKSIDHK 132
L+ + L + +++ + N+++KN D ++ +
Sbjct: 243 ELDEKSSTLAKEGMKLSVCRFRSREERQRERERVRRERQQQHGKYPNLYVKNFDDTVTSE 302
Query: 133 ALHDTFSSFGNILSCKIATDGSGQ-SKGFGFVQFENKESAQNAIDKLNG-MLINDKQVFV 190
L + F FG +S + D + Q S+ FGFV F+ + +A AI +L+G + + +FV
Sbjct: 303 KLKELFERFGETVSVSVMMDKATQVSRCFGFVSFKEQSAASQAIQELHGSTALGPRPLFV 362
Query: 191 GHFLRKQER 199
+ LRK R
Sbjct: 363 TYALRKDAR 371
>gi|68070939|ref|XP_677383.1| polyadenylate-binding protein [Plasmodium berghei strain ANKA]
gi|56497479|emb|CAH95361.1| polyadenylate-binding protein, putative [Plasmodium berghei]
Length = 833
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 145/250 (58%), Positives = 190/250 (76%), Gaps = 4/250 (1%)
Query: 27 FLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAAR 86
F T SLYVGDL +VT++ LY++F+ VG VLS+RVCRD TR+SLGY YVNY N ADA R
Sbjct: 13 FSTASLYVGDLSEDVTEAVLYEIFNTVGHVLSIRVCRDSVTRKSLGYAYVNYHNLADAER 72
Query: 87 ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
ALD LN+T + + R+M+SHRDPS+RKSGTGNIF+KNLDK+ID+KAL DTFS FGNILS
Sbjct: 73 ALDTLNYTNIKGQPARLMWSHRDPSLRKSGTGNIFVKNLDKTIDNKALFDTFSMFGNILS 132
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKT 206
CK+ATD G+SK +GFV +E++ESA+ AI+K+NGM + K V+VGHF++K ER T T
Sbjct: 133 CKVATDEFGKSKNYGFVHYEDEESAKEAIEKVNGMQLGSKNVYVGHFIKKSERATN--DT 190
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
KF N++VKN ++ T+ LK++F YG ITS +V D K++ F F+N+ +AD A A+
Sbjct: 191 KFTNLYVKNFPDTVTEAHLKQLFSPYGEITSMIV--KSDNKNRKFCFINYSDADSARNAM 248
Query: 267 EALNGKKFDD 276
E LNGKK +
Sbjct: 249 ENLNGKKITE 258
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 130/403 (32%), Positives = 212/403 (52%), Gaps = 28/403 (6%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
T +++V +LD + + L+D FS G +LS +V D +S YG+V+Y + A A+
Sbjct: 103 TGNIFVKNLDKTIDNKALFDTFSMFGNILSCKVATD-EFGKSKNYGFVHYEDEESAKEAI 161
Query: 89 DVLNFTPLNNKSIRIMY--SHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
+ +N L +K++ + + + + + N+++KN ++ L FS +G I S
Sbjct: 162 EKVNGMQLGSKNVYVGHFIKKSERATNDTKFTNLYVKNFPDTVTEAHLKQLFSPYGEITS 221
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLIN-DKQVFVGHFLRKQERETVAIK 205
+ +D +++ F F+ + + +SA+NA++ LNG I D ++ + +K+E E A +
Sbjct: 222 MIVKSDN--KNRKFCFINYSDADSARNAMENLNGKKITEDGKIDYNYDPKKEESEKAANE 279
Query: 206 TKFNNVFVKNLDESTTDE--DLKKIFGEYGTITSAVVMRD--------------GDGKSK 249
NN + +T++ + K E T A D D K++
Sbjct: 280 NYNNNNTTSEENATTSETPAEKKTTDSESATNKDATPGEDQTSANGTTTTVTSTTDAKTE 339
Query: 250 CFGFVNFENADDAAKAVEALNGKKFDDRE-----WYVGKAQKKSEREQELKGQFEQAMKE 304
N NA A E + KK + YVG Q ++ R LK +F+ E
Sbjct: 340 ETPNDNTANAGINASITEKKDKKKSGESTETPNILYVGPHQSRARRHAILKAKFDTLNTE 399
Query: 305 TVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEE 364
+ +K G+NLYIKNL DS++D+ LKELF +GTITS KVM+D SKG GFV F T EE
Sbjct: 400 SRNKHPGVNLYIKNLDDSMNDQTLKELFEPYGTITSAKVMKDDKDQSKGFGFVCFGTHEE 459
Query: 365 ASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPV 407
A++A+ EM+ K+I KPLYV +A+++E R +RLQ +F +M P+
Sbjct: 460 ANKAVTEMHLKIINGKPLYVGLAEKREHRLSRLQQRF-RMNPI 501
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 43/60 (71%)
Query: 511 QRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSV 570
Q+ +LGE+L+PLV A K+TGM+LEMD +E+L LLE+ + LK K+ EA+ VL++
Sbjct: 773 QKQVLGENLFPLVANYHPTLAGKITGMMLEMDNSELLILLENEDQLKKKIDEALVVLQNA 832
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
S N+ +LY+ +LD ++ D L +LF G + S +V +D +S G+G+V +
Sbjct: 400 SRNKHPGVNLYIKNLDDSMNDQTLKELFEPYGTITSAKVMKD-DKDQSKGFGFVCFGTHE 458
Query: 83 DAARALDVLNFTPLNNKSIRI 103
+A +A+ ++ +N K + +
Sbjct: 459 EANKAVTEMHLKIINGKPLYV 479
>gi|70947056|ref|XP_743180.1| polyadenylate-binding protein [Plasmodium chabaudi chabaudi]
gi|56522555|emb|CAH74716.1| polyadenylate-binding protein, putative [Plasmodium chabaudi
chabaudi]
Length = 629
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 145/248 (58%), Positives = 189/248 (76%), Gaps = 4/248 (1%)
Query: 27 FLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAAR 86
F T SLYVGDL +VT++ LY++F+ VG VLS+RVCRD TR+SLGY YVNY N ADA R
Sbjct: 13 FSTASLYVGDLSEDVTEAVLYEIFNTVGHVLSIRVCRDSVTRKSLGYAYVNYHNLADAER 72
Query: 87 ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
ALD LN+T + + R+M+SHRDPS+RKSGTGNIF+KNLDK+ID+KAL DTFS FGNILS
Sbjct: 73 ALDTLNYTNIKGQPARLMWSHRDPSLRKSGTGNIFVKNLDKTIDNKALFDTFSMFGNILS 132
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKT 206
CK+ATD G+SK +GFV +E++ESA+ AI+K+NGM + K V+VGHF++K ER T T
Sbjct: 133 CKVATDEFGKSKNYGFVHYEDEESAKEAIEKVNGMQLGSKNVYVGHFIKKSERATN--DT 190
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
KF N++VKN ++ T+ LK++F YG ITS +V D K++ F F+N+ +AD A A+
Sbjct: 191 KFTNLYVKNFPDTVTEAHLKELFSPYGEITSMIV--KSDNKNRKFCFINYSDADSARNAM 248
Query: 267 EALNGKKF 274
E LNGKK
Sbjct: 249 ENLNGKKI 256
Score = 198 bits (503), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 137/424 (32%), Positives = 221/424 (52%), Gaps = 29/424 (6%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
T +++V +LD + + L+D FS G +LS +V D +S YG+V+Y + A A+
Sbjct: 103 TGNIFVKNLDKTIDNKALFDTFSMFGNILSCKVATD-EFGKSKNYGFVHYEDEESAKEAI 161
Query: 89 DVLNFTPLNNKSIRIMY--SHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
+ +N L +K++ + + + + + N+++KN ++ L + FS +G I S
Sbjct: 162 EKVNGMQLGSKNVYVGHFIKKSERATNDTKFTNLYVKNFPDTVTEAHLKELFSPYGEITS 221
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLIN-DKQVFVGHFLRKQERETVAIK 205
+ +D +++ F F+ + + +SA+NA++ LNG I D ++ + +K+E E A +
Sbjct: 222 MIVKSDN--KNRKFCFINYSDADSARNAMENLNGKKITEDGKIDHNYDPKKEEAEKAANE 279
Query: 206 TKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKA 265
N +N S T + KK E T A G+ ++ G + AK
Sbjct: 280 NSNNTTSEENAATSETPAE-KKTDSESATNKDATT---GEDQTSANGTTTTVTSTTDAKT 335
Query: 266 VEALN--------GKKFDDRE----------WYVGKAQKKSEREQELKGQFEQAMKETVD 307
EA N +K D ++ YVG Q ++ R LK +F+ E+ +
Sbjct: 336 EEATNDSTANAATAEKKDSKKSGESTETPNILYVGPHQSRARRHALLKAKFDTLNTESRN 395
Query: 308 KFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASR 367
K G+NLYIKNL DS+DD+ LKELF +GTITS KVM+D SKG GFV F T EEA++
Sbjct: 396 KHPGVNLYIKNLDDSMDDQTLKELFEPYGTITSAKVMKDDKDQSKGFGFVCFGTHEEANK 455
Query: 368 ALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGL 427
A+ EM+ K+I KPLYV +A+++E+R +RLQ +F +M P+ + PM P
Sbjct: 456 AVTEMHLKIINGKPLYVGLAEKREQRLSRLQQRF-RMHPIRHHMNNSLNSPMQYPNSQTP 514
Query: 428 GQQF 431
QF
Sbjct: 515 QLQF 518
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/263 (32%), Positives = 140/263 (53%), Gaps = 21/263 (7%)
Query: 117 TGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAI 175
T ++++ +L + + L++ F++ G++LS ++ D + +S G+ +V + N A+ A+
Sbjct: 15 TASLYVGDLSEDVTEAVLYEIFNTVGHVLSIRVCRDSVTRKSLGYAYVNYHNLADAERAL 74
Query: 176 DKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTI 235
D LN I + L R+ K+ N+FVKNLD++ ++ L F +G I
Sbjct: 75 DTLNYTNIKGQPAR----LMWSHRDPSLRKSGTGNIFVKNLDKTIDNKALFDTFSMFGNI 130
Query: 236 TSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELK 295
S V D GKSK +GFV++E+ + A +A+E +NG + + YVG KKSER
Sbjct: 131 LSCKVATDEFGKSKNYGFVHYEDEESAKEAIEKVNGMQLGSKNVYVGHFIKKSER----- 185
Query: 296 GQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSG 355
A +T KF NLY+KN D++ + LKELFS +G ITS V D ++
Sbjct: 186 -----ATNDT--KF--TNLYVKNFPDTVTEAHLKELFSPYGEITSMIVKSD--NKNRKFC 234
Query: 356 FVAFSTPEEASRALAEMNGKMIV 378
F+ +S + A A+ +NGK I
Sbjct: 235 FINYSDADSARNAMENLNGKKIT 257
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
S N+ +LY+ +LD ++ D L +LF G + S +V +D +S G+G+V +
Sbjct: 393 SRNKHPGVNLYIKNLDDSMDDQTLKELFEPYGTITSAKVMKD-DKDQSKGFGFVCFGTHE 451
Query: 83 DAARALDVLNFTPLNNKSIRI 103
+A +A+ ++ +N K + +
Sbjct: 452 EANKAVTEMHLKIINGKPLYV 472
>gi|340056333|emb|CCC50664.1| poly(A)-binding protein [Trypanosoma vivax Y486]
Length = 548
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 212/571 (37%), Positives = 292/571 (51%), Gaps = 72/571 (12%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
S++VG LD N+ + +LYD F +VG V SVRVC D T++SLGYGYVN+ NPADA +ALD
Sbjct: 10 SIWVGGLDPNLNEQKLYDHFVRVGPVASVRVCVDTVTQKSLGYGYVNFQNPADAEKALDQ 69
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
L +K IRI RDPS R+SG NI +K L ++D AL + FS +G + + +A
Sbjct: 70 AGVK-LGSKHIRIARIQRDPSKRRSGVTNIVVKKLPPTVDTYALKEMFSKYGRLTAIGLA 128
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNN 210
T+ G+S+G+ + +E +ESA A+ +NGM I+D + V + E + + + N
Sbjct: 129 TNEKGESRGYARISYEKEESAIEAVQGVNGMTIDDCPITVERYQPHHREEQLKL---YTN 185
Query: 211 VFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALN 270
++VKNLD S DE LK++F YG +TSA V G S F +V + + A KAVE L
Sbjct: 186 LYVKNLDPSVGDEKLKEVFSAYGEVTSAKVRDLGGKMSVGFAYVAYATHEAAVKAVEEL- 244
Query: 271 GKKFDDREWYVGK-AQKKSEREQELKGQFEQAMKETVDKFQGL-----NLYIKNLGDSID 324
DD+E + K K S + + ++ + + Q L NLY+KN D++
Sbjct: 245 ----DDKENPLAKEGMKLSVCRFRSREERQRERERLRRERQQLYSKYPNLYVKNFDDTVT 300
Query: 325 DEKLKELFSEFGTITSCKVMRD-PSGISKGSGFVAFSTPEEASRALAEMNGKMIVS-KPL 382
E+LKELF FG S VM D + +S+ GFV+F ASRA+ E++G + +PL
Sbjct: 301 SERLKELFERFGETVSVSVMVDKATKVSRCFGFVSFKEQNSASRAIQELHGSTALGPRPL 360
Query: 383 YVAVAQRKEERRARLQ-----------------------AQFSQMRPVAMGPSVP---PR 416
+V A RK+ RR L+ Q M P AM VP R
Sbjct: 361 FVTYALRKDARRQTLEDMRNKQPRMRQTPMGGLMGGMMGPQLGFMNPPAMFNGVPFMNTR 420
Query: 417 MPMYPPGPSGLGQQFLYGQAPPAIIPPQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVP 476
MPM P G+G P R PLG P M P P
Sbjct: 421 MPMM-PNAMGMGG----------------PMR------PLG------PTPMNQVRARPAP 451
Query: 477 VDMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTG 536
LST LAN +PEQQ+ +LGE LY + ++ AAKVTG
Sbjct: 452 QRPPMQPMMPPQQQPPVPQGQNLSTMLANLTPEQQKNVLGERLYNHIVRVNPSVAAKVTG 511
Query: 537 MLLEMDQTEVLHLLESPEALKAKVAEAMEVL 567
MLLEMD +E+L+LL++P L KV EA+EVL
Sbjct: 512 MLLEMDNSEILNLLDTPGLLDTKVQEALEVL 542
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 99/191 (51%), Gaps = 20/191 (10%)
Query: 28 LTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARA 87
L T+LYV +LD +V D +L ++FS G+V S +V RDL + S+G+ YV YA A +A
Sbjct: 182 LYTNLYVKNLDPSVGDEKLKEVFSAYGEVTSAKV-RDLGGKMSVGFAYVAYATHEAAVKA 240
Query: 88 LDVLN--FTPLNNKSIRIMYSHRDPSIRK---------------SGTGNIFIKNLDKSID 130
++ L+ PL + +++ + S N+++KN D ++
Sbjct: 241 VEELDDKENPLAKEGMKLSVCRFRSREERQRERERLRRERQQLYSKYPNLYVKNFDDTVT 300
Query: 131 HKALHDTFSSFGNILSCKIATDGSGQ-SKGFGFVQFENKESAQNAIDKLNG-MLINDKQV 188
+ L + F FG +S + D + + S+ FGFV F+ + SA AI +L+G + + +
Sbjct: 301 SERLKELFERFGETVSVSVMVDKATKVSRCFGFVSFKEQNSASRAIQELHGSTALGPRPL 360
Query: 189 FVGHFLRKQER 199
FV + LRK R
Sbjct: 361 FVTYALRKDAR 371
>gi|82595449|ref|XP_725855.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23481012|gb|EAA17420.1| polyA binding protein-related [Plasmodium yoelii yoelii]
Length = 859
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 145/250 (58%), Positives = 190/250 (76%), Gaps = 4/250 (1%)
Query: 27 FLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAAR 86
F T SLYVGDL +VT++ LY++F+ VG VLS+RVCRD TR+SLGY YVNY N ADA R
Sbjct: 13 FSTASLYVGDLSEDVTEAVLYEIFNTVGHVLSIRVCRDSVTRKSLGYAYVNYHNLADAER 72
Query: 87 ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
ALD LN+T + + R+M+SHRDPS+RKSGTGNIF+KNLDK+ID+KAL DTFS FGNILS
Sbjct: 73 ALDTLNYTNIKGQPARLMWSHRDPSLRKSGTGNIFVKNLDKTIDNKALFDTFSMFGNILS 132
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKT 206
CK+ATD G+SK +GFV +E++ESA+ AI+K+NGM + K V+VGHF++K ER T T
Sbjct: 133 CKVATDEFGKSKNYGFVHYEDEESAKEAIEKVNGMQLGSKNVYVGHFIKKSERATN--DT 190
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
KF N++VKN ++ T+ LK++F YG ITS +V D K++ F F+N+ +AD A A+
Sbjct: 191 KFTNLYVKNFPDTVTEAHLKQLFSPYGEITSMIV--KSDNKNRKFCFINYSDADSARNAM 248
Query: 267 EALNGKKFDD 276
E LNGKK +
Sbjct: 249 ENLNGKKITE 258
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 130/408 (31%), Positives = 213/408 (52%), Gaps = 35/408 (8%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
T +++V +LD + + L+D FS G +LS +V D +S YG+V+Y + A A+
Sbjct: 103 TGNIFVKNLDKTIDNKALFDTFSMFGNILSCKVATD-EFGKSKNYGFVHYEDEESAKEAI 161
Query: 89 DVLNFTPLNNKSIRIMY--SHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
+ +N L +K++ + + + + + N+++KN ++ L FS +G I S
Sbjct: 162 EKVNGMQLGSKNVYVGHFIKKSERATNDTKFTNLYVKNFPDTVTEAHLKQLFSPYGEITS 221
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLIN-DKQVFVGHFLRKQERETVAIK 205
+ +D +++ F F+ + + +SA+NA++ LNG I D ++ + +K+E E A +
Sbjct: 222 MIVKSDN--KNRKFCFINYSDADSARNAMENLNGKKITEDGKIDYNYDPKKEETEKPANE 279
Query: 206 TKFNNVFVKNL--------------DESTTDEDLKKIFGEYGTITSAVVMR-------DG 244
NN + E T++D GE T + +
Sbjct: 280 NSNNNTTTEENTTTSETPAEKKTPDSEPATNKDATP--GEDQTSANGTTTTVTSTTDANP 337
Query: 245 DGKSKCFGFVNFENADDAAKAVEALNGKKFDDRE-----WYVGKAQKKSEREQELKGQFE 299
D K++ N NA A E + KK + YVG Q ++ R LK +F+
Sbjct: 338 DSKTEETPNDNTANAGTNASTTEKKDNKKSGENTETPNILYVGPHQSRARRHAILKAKFD 397
Query: 300 QAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAF 359
E+ +K G+NLYIKNL DS++D+ LKELF +GTITS KVM+D SKG GFV F
Sbjct: 398 TLNTESRNKHPGVNLYIKNLDDSMNDQTLKELFEPYGTITSAKVMKDDKDQSKGFGFVCF 457
Query: 360 STPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPV 407
T EEA++A+ EM+ K+I KPLYV +A+++E+R +RLQ +F +M P+
Sbjct: 458 GTHEEANKAVTEMHLKIINGKPLYVGLAEKREQRLSRLQQRF-RMHPI 504
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 39/54 (72%)
Query: 511 QRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAM 564
Q+ +LGE+L+PLV A K+TGM+LEMD +E+L LLE+ + LK K+ EA+
Sbjct: 781 QKQVLGENLFPLVANYHPTLAGKITGMMLEMDNSELLILLENEDQLKKKIDEAL 834
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
S N+ +LY+ +LD ++ D L +LF G + S +V +D +S G+G+V +
Sbjct: 403 SRNKHPGVNLYIKNLDDSMNDQTLKELFEPYGTITSAKVMKD-DKDQSKGFGFVCFGTHE 461
Query: 83 DAARALDVLNFTPLNNKSIRI 103
+A +A+ ++ +N K + +
Sbjct: 462 EANKAVTEMHLKIINGKPLYV 482
>gi|296424904|ref|XP_002841985.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638239|emb|CAZ86176.1| unnamed protein product [Tuber melanosporum]
Length = 374
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 140/262 (53%), Positives = 189/262 (72%), Gaps = 2/262 (0%)
Query: 21 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYAN 80
A N + SLYVG+L+ +VT++ L++LFS +G V S+RVCRD TRRSLGY YVNY N
Sbjct: 44 SAPHNSHTSASLYVGELEPSVTEAMLFELFSTIGNVASIRVCRDAVTRRSLGYSYVNYNN 103
Query: 81 PADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSS 140
AD RAL+ LN+T + + RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++
Sbjct: 104 TADGERALEELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAA 163
Query: 141 FGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERE 200
FGNILSCK+A D S+G+GFV +E E+A NAI +NGML+N+K+VFVGH + K++R+
Sbjct: 164 FGNILSCKVAQDEFSNSRGYGFVHYETAEAANNAIKHVNGMLLNEKKVFVGHHIPKKDRQ 223
Query: 201 TV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFEN 258
+ +K F NV+VKN+D TDE+ + +F YG ITSA + RD DG S+ FGFVNF+
Sbjct: 224 SKFDEMKANFTNVYVKNIDPEVTDEEFRTMFENYGPITSASLSRDQDGVSRGFGFVNFQE 283
Query: 259 ADDAAKAVEALNGKKFDDREWY 280
AAKAVE L+ + + Y
Sbjct: 284 HQHAAKAVEELHESELKGQTLY 305
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 159/315 (50%), Gaps = 31/315 (9%)
Query: 117 TGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAI 175
+ ++++ L+ S+ L + FS+ GN+ S ++ D + +S G+ +V + N + A+
Sbjct: 52 SASLYVGELEPSVTEAMLFELFSTIGNVASIRVCRDAVTRRSLGYSYVNYNNTADGERAL 111
Query: 176 DKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTI 235
++LN LI + + +R+ KT NVF+KNLD + ++ L F +G I
Sbjct: 112 EELNYTLIKGRPCRI----MWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNI 167
Query: 236 TSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQ--- 292
S V +D S+ +GFV++E A+ A A++ +NG ++++ +VG K +R+
Sbjct: 168 LSCKVAQDEFSNSRGYGFVHYETAEAANNAIKHVNGMLLNEKKVFVGHHIPKKDRQSKFD 227
Query: 293 ELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISK 352
E+K F N+Y+KN+ + DE+ + +F +G ITS + RD G+S+
Sbjct: 228 EMKANF-------------TNVYVKNIDPEVTDEEFRTMFENYGPITSASLSRDQDGVSR 274
Query: 353 GSGFVAFSTPEEASRALAEMNGKMIVSKPLY-VAVAQRKEERRARLQAQFSQMRPVA--- 408
G GFV F + A++A+ E++ + + LY + + + R + ++ S R
Sbjct: 275 GFGFVNFQEHQHAAKAVEELHESELKGQTLYPLELRKLASTRVSICTSRISMTRSTTSVS 334
Query: 409 ------MGPSVPPRM 417
M S+PPR+
Sbjct: 335 ARSLPRMELSLPPRL 349
>gi|71745456|ref|XP_827358.1| poly(A)-binding protein 1 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|4104919|gb|AAD13337.1| poly(A) binding protein I [Trypanosoma brucei]
gi|70831523|gb|EAN77028.1| poly(A)-binding protein 1 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|261331563|emb|CBH14557.1| PABP2 [Trypanosoma brucei gambiense DAL972]
Length = 555
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 213/585 (36%), Positives = 307/585 (52%), Gaps = 93/585 (15%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
S++VG LD N+ + +LYD F +VG V SVRVC D T++SLGYGYVN+ NPADA +ALD
Sbjct: 10 SIWVGGLDPNLNEQKLYDHFVRVGPVASVRVCVDSVTQKSLGYGYVNFQNPADAEKALDQ 69
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
L K IRI RDPS R+SG NI +K L ++D AL + FS +G + + +A
Sbjct: 70 AGVK-LGTKHIRIAKIQRDPSKRRSGVTNIIVKKLPPTVDTYALKEMFSKYGRLTAIGLA 128
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNN 210
TD G+S+G+ + +E +ESA +A+ +LNG+ I+D + V + E + ++ N
Sbjct: 129 TDEKGESRGYARISYEKEESAVDAVRELNGVSIDDCAITVERYQPHHREEQL---KQYTN 185
Query: 211 VFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKC-FGFVNFENADDAAKAVEAL 269
++VKNLD S DE LK++F +G +TSA V RD G+ FG+V + + AAKAVE L
Sbjct: 186 LYVKNLDPSVDDEKLKEVFSPFGEVTSAKV-RDLAGRPTVGFGYVAYATHEAAAKAVEEL 244
Query: 270 NGKKFDDREWYVGKAQKK--------SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGD 321
DD+E + K K E + + + + ++ K+ NLY+KN D
Sbjct: 245 -----DDKESPLAKEGMKLSVCRFRSREERKRERERLRRERQQQHSKYP--NLYVKNFDD 297
Query: 322 SIDDEKLKELFSEFGTITSCKVMRD-PSGISKGSGFVAFSTPEEASRALAEMNGKMIVS- 379
++ E+LK LF FG S VM D + +S+ GFV+F A++A+ E++G +
Sbjct: 298 TVTSERLKALFDPFGETVSVSVMMDKATKVSRCFGFVSFKEQSSAAQAIQELHGSTALGP 357
Query: 380 KPLYVAVAQRKEERRARLQ-----------------------AQFSQMRPVAM------- 409
+PL+V+ A RK+ RR L+ Q S M P AM
Sbjct: 358 RPLFVSYALRKDARRQTLEDMRNKQPRMRQPPMGGLMGGMMGPQLSFMNPPAMFNGMHFM 417
Query: 410 ---GPSVPPRM----PMYPPGPSGLGQQFLYGQAPPAIIPPQMPPRGHAYRYPLGRNMQD 462
P +P M PM P GP+ + Q +A P PQ PP MQ
Sbjct: 418 NTRMPMMPSTMGMGGPMRPMGPTPMNQV----RARPG---PQRPP------------MQ- 457
Query: 463 FPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPL 522
SM+ IP+ + GQ LST LA+ +P+QQ+ +LGE LY
Sbjct: 458 --------SMMAPQQQSHPQIPQPPVAQGQ-----NLSTVLASMTPDQQKNVLGERLYNY 504
Query: 523 VEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVL 567
+ + AAKVTGMLLEMD +E+L+LL++ L KV EA++VL
Sbjct: 505 IVRNNPSFAAKVTGMLLEMDNSEILNLLDNHSLLDTKVQEALDVL 549
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 101/189 (53%), Gaps = 20/189 (10%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
T+LYV +LD +V D +L ++FS G+V S +V RDL+ R ++G+GYV YA AA+A++
Sbjct: 184 TNLYVKNLDPSVDDEKLKEVFSPFGEVTSAKV-RDLAGRPTVGFGYVAYATHEAAAKAVE 242
Query: 90 VLN--FTPLNNKSIRIMYSHRDPSI---------------RKSGTGNIFIKNLDKSIDHK 132
L+ +PL + +++ + S N+++KN D ++ +
Sbjct: 243 ELDDKESPLAKEGMKLSVCRFRSREERKRERERLRRERQQQHSKYPNLYVKNFDDTVTSE 302
Query: 133 ALHDTFSSFGNILSCKIATDGSGQ-SKGFGFVQFENKESAQNAIDKLNG-MLINDKQVFV 190
L F FG +S + D + + S+ FGFV F+ + SA AI +L+G + + +FV
Sbjct: 303 RLKALFDPFGETVSVSVMMDKATKVSRCFGFVSFKEQSSAAQAIQELHGSTALGPRPLFV 362
Query: 191 GHFLRKQER 199
+ LRK R
Sbjct: 363 SYALRKDAR 371
>gi|294461458|gb|ADE76290.1| unknown [Picea sitchensis]
Length = 313
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 185/315 (58%), Positives = 212/315 (67%), Gaps = 67/315 (21%)
Query: 344 MRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQ 403
MRD G SKGSGFVAFS+P+EASRALAEMNGK++VSKPLYVA+AQRKEERRARLQAQFSQ
Sbjct: 1 MRDFHGHSKGSGFVAFSSPDEASRALAEMNGKIVVSKPLYVALAQRKEERRARLQAQFSQ 60
Query: 404 MR-PVAMGPSVPPRMPMY---------------------PPGPSGLG--QQFLYGQAP-P 438
+R PV M P+VP R+PMY PP +G G QQ + G P
Sbjct: 61 LRNPVGMAPAVPARVPMYPPGGPGLNQQIFYGQGPPALIPPQAAGFGYQQQLIPGMRPGS 120
Query: 439 AIIP----PQM---------------------------------PPRGH-AYRYPLGRNM 460
A IP P M PRG+ YRYP GRN+
Sbjct: 121 APIPNFYLPLMQAQQGQRPGGRRGGVAPIQQQPQQQLPLLQQQMLPRGNRVYRYPPGRNV 180
Query: 461 QDFPFDMGAGSMLPVPVDMGAGIPRRDA--SVGQPMPITALSTALANASPEQQRTLLGES 518
+ P AG M P+P+DMG G+P R A ++ QP+PI AL++ALANA+PEQQRT+LGES
Sbjct: 181 NEIPLSGVAGGMHPLPLDMG-GLPLRAAETTISQPIPIGALASALANATPEQQRTMLGES 239
Query: 519 LYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNP 578
LYPLV+QLE D AAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLR+V Q QA NP
Sbjct: 240 LYPLVDQLEHDHAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRNVTQAQA-NP 298
Query: 579 ADQLASLSLNENLVS 593
A+QLA+LSLNE LVS
Sbjct: 299 AEQLAALSLNETLVS 313
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 36/60 (60%)
Query: 241 MRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQ 300
MRD G SK GFV F + D+A++A+ +NGK + YV AQ+K ER L+ QF Q
Sbjct: 1 MRDFHGHSKGSGFVAFSSPDEASRALAEMNGKIVVSKPLYVALAQRKEERRARLQAQFSQ 60
Score = 42.0 bits (97), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 152 DGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER 199
D G SKG GFV F + + A A+ ++NG ++ K ++V RK+ER
Sbjct: 3 DFHGHSKGSGFVAFSSPDEASRALAEMNGKIVVSKPLYVALAQRKEER 50
>gi|389586343|dbj|GAB69072.1| polyadenylate-binding protein, partial [Plasmodium cynomolgi strain
B]
Length = 883
Score = 298 bits (762), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 143/250 (57%), Positives = 189/250 (75%), Gaps = 4/250 (1%)
Query: 27 FLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAAR 86
F T SLYVGDL+ +VT++ LY++F+ VG V S+RVCRD TR+SLGY YVNY N ADA R
Sbjct: 13 FSTASLYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRDSVTRKSLGYAYVNYHNLADAER 72
Query: 87 ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
ALD LN+T + + R+M+SHRDPS+RKSG GNIF+KNLDKSID+KAL DTFS FGNILS
Sbjct: 73 ALDTLNYTNIKGQPARLMWSHRDPSLRKSGAGNIFVKNLDKSIDNKALFDTFSMFGNILS 132
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKT 206
CK+ATD G+SK +GFV +E++ESA+ AI+K+NG+ + K V+VGHF++K ER T T
Sbjct: 133 CKVATDEFGKSKSYGFVHYEDEESAKEAIEKVNGIQLGSKNVYVGHFIKKSERATN--DT 190
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
KF N++VKN +S T+ LK++F YG ITS +V D K++ F F+N+ +++ A A+
Sbjct: 191 KFTNLYVKNFPDSVTETHLKELFSPYGEITSMIVKT--DNKNRKFCFINYADSESAKNAM 248
Query: 267 EALNGKKFDD 276
E LNGKK D
Sbjct: 249 ENLNGKKITD 258
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 73/152 (48%), Positives = 99/152 (65%), Gaps = 1/152 (0%)
Query: 280 YVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTIT 339
YVG Q ++ R LK +F+ E+ +K QG+NLYIKNL D+IDD+ LKELF +GTIT
Sbjct: 417 YVGPHQSRARRHAILKAKFDNLNMESKNKHQGVNLYIKNLDDAIDDQTLKELFEPYGTIT 476
Query: 340 SCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQA 399
S KVMRD SKG GFV F+ EEA++A+ EM+ K+I KPLYV +A+++E+R +RLQ
Sbjct: 477 SAKVMRDDKEQSKGFGFVCFALQEEANKAVTEMHLKIINGKPLYVGLAEKREQRLSRLQQ 536
Query: 400 QFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQF 431
+F +M P+ + PM P P QF
Sbjct: 537 RF-RMHPIRHHMNNALNSPMQYPNPQSPQLQF 567
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 87/263 (33%), Positives = 140/263 (53%), Gaps = 21/263 (7%)
Query: 117 TGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAI 175
T ++++ +L++ + L++ F++ G++ S ++ D + +S G+ +V + N A+ A+
Sbjct: 15 TASLYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRDSVTRKSLGYAYVNYHNLADAERAL 74
Query: 176 DKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTI 235
D LN I + L R+ K+ N+FVKNLD+S ++ L F +G I
Sbjct: 75 DTLNYTNIKGQPAR----LMWSHRDPSLRKSGAGNIFVKNLDKSIDNKALFDTFSMFGNI 130
Query: 236 TSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELK 295
S V D GKSK +GFV++E+ + A +A+E +NG + + YVG KKSER
Sbjct: 131 LSCKVATDEFGKSKSYGFVHYEDEESAKEAIEKVNGIQLGSKNVYVGHFIKKSER----- 185
Query: 296 GQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSG 355
A +T KF NLY+KN DS+ + LKELFS +G ITS V D ++
Sbjct: 186 -----ATNDT--KF--TNLYVKNFPDSVTETHLKELFSPYGEITSMIVKTDNK--NRKFC 234
Query: 356 FVAFSTPEEASRALAEMNGKMIV 378
F+ ++ E A A+ +NGK I
Sbjct: 235 FINYADSESAKNAMENLNGKKIT 257
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 94/188 (50%), Gaps = 25/188 (13%)
Query: 211 VFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENADDAAKAVEAL 269
++V +L+E T+ L +IF G ++S V RD KS + +VN+ N DA +A++ L
Sbjct: 18 LYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRDSVTRKSLGYAYVNYHNLADAERALDTL 77
Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVD----KFQGLNLYIKNLGDSIDD 325
N Y +KGQ + M D K N+++KNL SID+
Sbjct: 78 N---------YTN-----------IKGQPARLMWSHRDPSLRKSGAGNIFVKNLDKSIDN 117
Query: 326 EKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVA 385
+ L + FS FG I SCKV D G SK GFV + E A A+ ++NG + SK +YV
Sbjct: 118 KALFDTFSMFGNILSCKVATDEFGKSKSYGFVHYEDEESAKEAIEKVNGIQLGSKNVYVG 177
Query: 386 VAQRKEER 393
+K ER
Sbjct: 178 HFIKKSER 185
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 72/124 (58%), Gaps = 14/124 (11%)
Query: 188 VFVGHFLRKQERETVAIKTKFNNV-------------FVKNLDESTTDEDLKKIFGEYGT 234
++VG + R + +K KF+N+ ++KNLD++ D+ LK++F YGT
Sbjct: 416 LYVGPHQSRARRHAI-LKAKFDNLNMESKNKHQGVNLYIKNLDDAIDDQTLKELFEPYGT 474
Query: 235 ITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQEL 294
ITSA VMRD +SK FGFV F ++A KAV ++ K + + YVG A+K+ +R L
Sbjct: 475 ITSAKVMRDDKEQSKGFGFVCFALQEEANKAVTEMHLKIINGKPLYVGLAEKREQRLSRL 534
Query: 295 KGQF 298
+ +F
Sbjct: 535 QQRF 538
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 52/81 (64%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKL 178
N++IKNLD +ID + L + F +G I S K+ D QSKGFGFV F +E A A+ ++
Sbjct: 450 NLYIKNLDDAIDDQTLKELFEPYGTITSAKVMRDDKEQSKGFGFVCFALQEEANKAVTEM 509
Query: 179 NGMLINDKQVFVGHFLRKQER 199
+ +IN K ++VG ++++R
Sbjct: 510 HLKIINGKPLYVGLAEKREQR 530
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 42/58 (72%)
Query: 511 QRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLR 568
Q+ +LGE+L+PLV A K+TGM+LEMD +E+L LLE+ E LK K+ EA+ VL+
Sbjct: 824 QKQVLGENLFPLVANYHPTLAGKITGMMLEMDNSELLILLENEEQLKKKIDEALVVLQ 881
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
S N+ +LY+ +LD + D L +LF G + S +V RD +S G+G+V +A
Sbjct: 442 SKNKHQGVNLYIKNLDDAIDDQTLKELFEPYGTITSAKVMRD-DKEQSKGFGFVCFALQE 500
Query: 83 DAARALDVLNFTPLNNKSIRI 103
+A +A+ ++ +N K + +
Sbjct: 501 EANKAVTEMHLKIINGKPLYV 521
>gi|156103277|ref|XP_001617331.1| polyadenylate-binding protein [Plasmodium vivax Sal-1]
gi|148806205|gb|EDL47604.1| polyadenylate-binding protein, putative [Plasmodium vivax]
Length = 883
Score = 297 bits (761), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 142/250 (56%), Positives = 189/250 (75%), Gaps = 4/250 (1%)
Query: 27 FLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAAR 86
F T SLYVGDL+ +VT++ LY++F+ VG V S+RVCRD TR+SLGY YVNY N ADA R
Sbjct: 13 FSTASLYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRDSVTRKSLGYAYVNYHNLADAER 72
Query: 87 ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
ALD LN+T + + R+M+SHRDPS+RKSG GNIF+KNLDKSID+KAL DTFS FGNILS
Sbjct: 73 ALDTLNYTNIKGQPARLMWSHRDPSLRKSGAGNIFVKNLDKSIDNKALFDTFSMFGNILS 132
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKT 206
CK+ATD G+SK +GFV +E++ESA+ AI+K+NG+ + K V+VGHF++K ER T T
Sbjct: 133 CKVATDEFGKSKSYGFVHYEDEESAKEAIEKVNGIQLGSKNVYVGHFIKKSERATN--DT 190
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
KF N++VKN +S T+ LK++F +G ITS +V D K++ F F+N+ +++ A A+
Sbjct: 191 KFTNLYVKNFPDSVTEAHLKQLFSPFGEITSMIVKT--DNKNRKFCFINYADSESAKNAM 248
Query: 267 EALNGKKFDD 276
E LNGKK D
Sbjct: 249 ENLNGKKITD 258
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 79/168 (47%), Positives = 105/168 (62%), Gaps = 8/168 (4%)
Query: 280 YVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTIT 339
YVG Q ++ R LK +F+ E+ +K QG+NLYIKNL D+IDD+ LKELF +GTIT
Sbjct: 417 YVGPHQSRARRHAILKAKFDNLNMESKNKHQGVNLYIKNLDDAIDDQTLKELFEPYGTIT 476
Query: 340 SCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQA 399
S KVMRD SKG GFV F+ EEA+RA+ EM+ K+I KPLYV +A+++E+R +RLQ
Sbjct: 477 SAKVMRDDKEQSKGFGFVCFALQEEANRAVTEMHLKIINGKPLYVGLAEKREQRLSRLQQ 536
Query: 400 QFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQF-----LYGQAPPAIIP 442
+F +M P+ + PM P P QF YG+ P I P
Sbjct: 537 RF-RMHPIRHHMNNALNSPMQYPNPQSPQLQFNQNTLNYGR--PVITP 581
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/281 (33%), Positives = 147/281 (52%), Gaps = 28/281 (9%)
Query: 117 TGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAI 175
T ++++ +L++ + L++ F++ G++ S ++ D + +S G+ +V + N A+ A+
Sbjct: 15 TASLYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRDSVTRKSLGYAYVNYHNLADAERAL 74
Query: 176 DKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTI 235
D LN I + L R+ K+ N+FVKNLD+S ++ L F +G I
Sbjct: 75 DTLNYTNIKGQPAR----LMWSHRDPSLRKSGAGNIFVKNLDKSIDNKALFDTFSMFGNI 130
Query: 236 TSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELK 295
S V D GKSK +GFV++E+ + A +A+E +NG + + YVG KKSER
Sbjct: 131 LSCKVATDEFGKSKSYGFVHYEDEESAKEAIEKVNGIQLGSKNVYVGHFIKKSER----- 185
Query: 296 GQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSG 355
A +T KF NLY+KN DS+ + LK+LFS FG ITS V D ++
Sbjct: 186 -----ATNDT--KF--TNLYVKNFPDSVTEAHLKQLFSPFGEITSMIVKTDNK--NRKFC 234
Query: 356 FVAFSTPEEASRALAEMNGKMIVS----KPLYVAVAQRKEE 392
F+ ++ E A A+ +NGK I P Y A +KEE
Sbjct: 235 FINYADSESAKNAMENLNGKKITDDGQIDPTYDA---KKEE 272
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 94/188 (50%), Gaps = 25/188 (13%)
Query: 211 VFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENADDAAKAVEAL 269
++V +L+E T+ L +IF G ++S V RD KS + +VN+ N DA +A++ L
Sbjct: 18 LYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRDSVTRKSLGYAYVNYHNLADAERALDTL 77
Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVD----KFQGLNLYIKNLGDSIDD 325
N Y +KGQ + M D K N+++KNL SID+
Sbjct: 78 N---------YT-----------NIKGQPARLMWSHRDPSLRKSGAGNIFVKNLDKSIDN 117
Query: 326 EKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVA 385
+ L + FS FG I SCKV D G SK GFV + E A A+ ++NG + SK +YV
Sbjct: 118 KALFDTFSMFGNILSCKVATDEFGKSKSYGFVHYEDEESAKEAIEKVNGIQLGSKNVYVG 177
Query: 386 VAQRKEER 393
+K ER
Sbjct: 178 HFIKKSER 185
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 72/124 (58%), Gaps = 14/124 (11%)
Query: 188 VFVGHFLRKQERETVAIKTKFNNV-------------FVKNLDESTTDEDLKKIFGEYGT 234
++VG + R + +K KF+N+ ++KNLD++ D+ LK++F YGT
Sbjct: 416 LYVGPHQSRARRHAI-LKAKFDNLNMESKNKHQGVNLYIKNLDDAIDDQTLKELFEPYGT 474
Query: 235 ITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQEL 294
ITSA VMRD +SK FGFV F ++A +AV ++ K + + YVG A+K+ +R L
Sbjct: 475 ITSAKVMRDDKEQSKGFGFVCFALQEEANRAVTEMHLKIINGKPLYVGLAEKREQRLSRL 534
Query: 295 KGQF 298
+ +F
Sbjct: 535 QQRF 538
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 52/81 (64%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKL 178
N++IKNLD +ID + L + F +G I S K+ D QSKGFGFV F +E A A+ ++
Sbjct: 450 NLYIKNLDDAIDDQTLKELFEPYGTITSAKVMRDDKEQSKGFGFVCFALQEEANRAVTEM 509
Query: 179 NGMLINDKQVFVGHFLRKQER 199
+ +IN K ++VG ++++R
Sbjct: 510 HLKIINGKPLYVGLAEKREQR 530
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 42/58 (72%)
Query: 511 QRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLR 568
Q+ +LGE+L+PLV A K+TGM+LEMD +E+L LLE+ E LK K+ EA+ VL+
Sbjct: 823 QKQVLGENLFPLVANYHPTLAGKITGMMLEMDNSELLILLENEEQLKKKIDEALVVLQ 880
Score = 45.1 bits (105), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
S N+ +LY+ +LD + D L +LF G + S +V RD +S G+G+V +A
Sbjct: 442 SKNKHQGVNLYIKNLDDAIDDQTLKELFEPYGTITSAKVMRD-DKEQSKGFGFVCFALQE 500
Query: 83 DAARALDVLNFTPLNNKSIRI 103
+A RA+ ++ +N K + +
Sbjct: 501 EANRAVTEMHLKIINGKPLYV 521
>gi|221061487|ref|XP_002262313.1| polyadenylate-binding protein [Plasmodium knowlesi strain H]
gi|193811463|emb|CAQ42191.1| polyadenylate-binding protein, putative [Plasmodium knowlesi strain
H]
Length = 874
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 142/250 (56%), Positives = 189/250 (75%), Gaps = 4/250 (1%)
Query: 27 FLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAAR 86
F T SLYVGDL+ +VT++ LY++F+ VG V S+RVCRD TR+SLGY YVNY N ADA R
Sbjct: 13 FSTASLYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRDSVTRKSLGYAYVNYHNLADAER 72
Query: 87 ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
ALD LN+T + + R+M+SHRDPS+RKSG GNIF+KNLDKSID+KAL DTFS FGNILS
Sbjct: 73 ALDTLNYTNIKGQPARLMWSHRDPSLRKSGAGNIFVKNLDKSIDNKALFDTFSMFGNILS 132
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKT 206
CK+ATD G+SK +GFV +E++ESA+ AI+K+NG+ + K V+VGHF+++ ER T T
Sbjct: 133 CKVATDEFGKSKSYGFVHYEDEESAKEAIEKVNGIQLGSKNVYVGHFIKRSERATN--DT 190
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
KF N++VKN +S T+ LK++F YG ITS +V D K++ F F+N+ +++ A A+
Sbjct: 191 KFTNLYVKNFPDSVTEAHLKQLFSPYGEITSMIVKT--DNKNRKFCFINYADSESAKNAM 248
Query: 267 EALNGKKFDD 276
E LNGKK D
Sbjct: 249 ENLNGKKITD 258
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/152 (48%), Positives = 99/152 (65%), Gaps = 1/152 (0%)
Query: 280 YVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTIT 339
YVG Q ++ R LK +F+ E+ +K QG+NLYIKNL D+IDD+ LKELF +GTIT
Sbjct: 408 YVGPHQSRARRHAILKAKFDNLNMESKNKHQGVNLYIKNLDDAIDDQTLKELFEPYGTIT 467
Query: 340 SCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQA 399
S KVMRD SKG GFV F+ EEA++A+ EM+ K+I KPLYV +A+++E+R +RLQ
Sbjct: 468 SAKVMRDDKEQSKGFGFVCFAQQEEANKAVTEMHLKIINGKPLYVGLAEKREQRLSRLQQ 527
Query: 400 QFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQF 431
+F +M P+ + PM P P QF
Sbjct: 528 RF-RMHPIRHHMNNALNSPMQYPNPQSPQLQF 558
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 85/263 (32%), Positives = 140/263 (53%), Gaps = 21/263 (7%)
Query: 117 TGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAI 175
T ++++ +L++ + L++ F++ G++ S ++ D + +S G+ +V + N A+ A+
Sbjct: 15 TASLYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRDSVTRKSLGYAYVNYHNLADAERAL 74
Query: 176 DKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTI 235
D LN I + L R+ K+ N+FVKNLD+S ++ L F +G I
Sbjct: 75 DTLNYTNIKGQPAR----LMWSHRDPSLRKSGAGNIFVKNLDKSIDNKALFDTFSMFGNI 130
Query: 236 TSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELK 295
S V D GKSK +GFV++E+ + A +A+E +NG + + YVG K+SER
Sbjct: 131 LSCKVATDEFGKSKSYGFVHYEDEESAKEAIEKVNGIQLGSKNVYVGHFIKRSER----- 185
Query: 296 GQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSG 355
A +T KF NLY+KN DS+ + LK+LFS +G ITS V D ++
Sbjct: 186 -----ATNDT--KF--TNLYVKNFPDSVTEAHLKQLFSPYGEITSMIVKTDNK--NRKFC 234
Query: 356 FVAFSTPEEASRALAEMNGKMIV 378
F+ ++ E A A+ +NGK I
Sbjct: 235 FINYADSESAKNAMENLNGKKIT 257
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 72/124 (58%), Gaps = 14/124 (11%)
Query: 188 VFVGHFLRKQERETVAIKTKFNNV-------------FVKNLDESTTDEDLKKIFGEYGT 234
++VG + R + +K KF+N+ ++KNLD++ D+ LK++F YGT
Sbjct: 407 LYVGPHQSRARRHAI-LKAKFDNLNMESKNKHQGVNLYIKNLDDAIDDQTLKELFEPYGT 465
Query: 235 ITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQEL 294
ITSA VMRD +SK FGFV F ++A KAV ++ K + + YVG A+K+ +R L
Sbjct: 466 ITSAKVMRDDKEQSKGFGFVCFAQQEEANKAVTEMHLKIINGKPLYVGLAEKREQRLSRL 525
Query: 295 KGQF 298
+ +F
Sbjct: 526 QQRF 529
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 52/81 (64%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKL 178
N++IKNLD +ID + L + F +G I S K+ D QSKGFGFV F +E A A+ ++
Sbjct: 441 NLYIKNLDDAIDDQTLKELFEPYGTITSAKVMRDDKEQSKGFGFVCFAQQEEANKAVTEM 500
Query: 179 NGMLINDKQVFVGHFLRKQER 199
+ +IN K ++VG ++++R
Sbjct: 501 HLKIINGKPLYVGLAEKREQR 521
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 42/58 (72%)
Query: 511 QRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLR 568
Q+ +LGE+L+PLV A K+TGM+LEMD +E+L LLE+ E LK K+ EA+ VL+
Sbjct: 814 QKQVLGENLFPLVANYHPTLAGKITGMMLEMDNSELLILLENEEQLKKKIDEALVVLQ 871
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
S N+ +LY+ +LD + D L +LF G + S +V RD +S G+G+V +A
Sbjct: 433 SKNKHQGVNLYIKNLDDAIDDQTLKELFEPYGTITSAKVMRD-DKEQSKGFGFVCFAQQE 491
Query: 83 DAARALDVLNFTPLNNKSIRI 103
+A +A+ ++ +N K + +
Sbjct: 492 EANKAVTEMHLKIINGKPLYV 512
>gi|335775987|gb|AEH58755.1| polyadenylate-binding protein 1-like protein [Equus caballus]
Length = 510
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 148/283 (52%), Positives = 201/283 (71%), Gaps = 4/283 (1%)
Query: 146 SCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--A 203
+CK+ D +G SKG+GFV FE +E+A+ AI+K+NGML+ND++VFVG F ++ERE A
Sbjct: 1 ACKVVRDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGA 59
Query: 204 IKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAA 263
+F NV++KN E DE LK +FG++G S VM D GKSK FGFV+FE +DA
Sbjct: 60 RAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQ 119
Query: 264 KAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSI 323
KAV+ +NGK+ + ++ YVG+AQKK ER+ ELK +FEQ ++ + ++QG+NLY+KNL D I
Sbjct: 120 KAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGI 179
Query: 324 DDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLY 383
DDE+L++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +KPLY
Sbjct: 180 DDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLY 238
Query: 384 VAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSG 426
VA+AQRKEER+A L Q+ Q P P P PSG
Sbjct: 239 VALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSG 281
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/264 (40%), Positives = 153/264 (57%), Gaps = 23/264 (8%)
Query: 58 SVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI----MYSHRDPSI- 112
+ +V RD + S GYG+V++ A RA++ +N LN++ + + R+ +
Sbjct: 1 ACKVVRDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELG 58
Query: 113 -RKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESA 171
R N++IKN + +D + L D F FG LS K+ TD SG+SKGFGFV FE E A
Sbjct: 59 ARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDA 118
Query: 172 QNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFN-------------NVFVKNLDE 218
Q A+D++NG +N KQ++VG +K ER+T +K KF N++VKNLD+
Sbjct: 119 QKAVDEMNGKELNGKQIYVGRAQKKVERQT-ELKRKFEQMKQDRITRYQGVNLYVKNLDD 177
Query: 219 STTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDRE 278
DE L+K F +GTITSA VM +G G+SK FGFV F + ++A KAV +NG+ +
Sbjct: 178 GIDDERLRKEFSPFGTITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKP 236
Query: 279 WYVGKAQKKSEREQELKGQFEQAM 302
YV AQ+K ER+ L Q+ Q M
Sbjct: 237 LYVALAQRKEERQAHLTNQYMQRM 260
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 107/197 (54%), Gaps = 22/197 (11%)
Query: 21 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYAN 80
GA +F T++Y+ + ++ D +L DLF + G LSV+V D S + S G+G+V++
Sbjct: 58 GARAKEF--TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGK-SKGFGFVSFER 114
Query: 81 PADAARALDVLNFTPLNNKSIRIMYSHR-----------------DPSIRKSGTGNIFIK 123
DA +A+D +N LN K I + + + D R G N+++K
Sbjct: 115 HEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGV-NLYVK 173
Query: 124 NLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLI 183
NLD ID + L FS FG I S K+ +G G+SKGFGFV F + E A A+ ++NG ++
Sbjct: 174 NLDDGIDDERLRKEFSPFGTITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTEMNGRIV 232
Query: 184 NDKQVFVGHFLRKQERE 200
K ++V RK+ER+
Sbjct: 233 ATKPLYVALAQRKEERQ 249
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA+A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 418 PLTA--SMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPE 475
Query: 555 ALKAKVAEAMEVLRSVAQQQA 575
+L++KV EA+ VL++ ++A
Sbjct: 476 SLRSKVDEAVAVLQAHQAKEA 496
>gi|198422488|ref|XP_002121866.1| PREDICTED: similar to poly(A) binding protein, cytoplasmic 4
(inducible form) [Ciona intestinalis]
Length = 270
Score = 295 bits (754), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 142/250 (56%), Positives = 190/250 (76%), Gaps = 9/250 (3%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL +VT++ LY+ FSQ G VLS+RVCRD+ TRRSLGY YVN+ PADA RALD
Sbjct: 13 SLYVGDLHLDVTEAMLYEKFSQAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALDT 72
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+N+ P+ + IRIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FGNILSCK++
Sbjct: 73 MNYDPIKGRPIRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVS 132
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER-----ETVAIK 205
+ +G SKG+GFV FE +E+ AI+K+NGML+NDK+VFVG FL + ER E V
Sbjct: 133 CNENG-SKGYGFVHFETEEAGIRAIEKVNGMLLNDKKVFVGKFLTRSERIKKMGERV--- 188
Query: 206 TKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKA 265
+F NV++KN + ++ L+ +F +YG + S VMRD DG S+ FGFV +++ ++A A
Sbjct: 189 RQFTNVYIKNFGDKYDEKTLQVMFEKYGVVKSVAVMRDRDGNSRGFGFVAYDSHEEAQAA 248
Query: 266 VEALNGKKFD 275
VEA+NG++ +
Sbjct: 249 VEAMNGQEIE 258
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 146/260 (56%), Gaps = 16/260 (6%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDK 177
++++ +L + L++ FS G +LS ++ D + +S G+ +V F+ A+ A+D
Sbjct: 13 SLYVGDLHLDVTEAMLYEKFSQAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALDT 72
Query: 178 LNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITS 237
+N I + + + +R+ K+ N+F+KNLD+S ++ L F +G I S
Sbjct: 73 MNYDPIKGRPIRI----MWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 128
Query: 238 AVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQ 297
V + +G SK +GFV+FE + +A+E +NG +D++ +VGK +SER ++
Sbjct: 129 CKVSCNENG-SKGYGFVHFETEEAGIRAIEKVNGMLLNDKKVFVGKFLTRSERIKK---- 183
Query: 298 FEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFV 357
M E V +F N+YIKN GD D++ L+ +F ++G + S VMRD G S+G GFV
Sbjct: 184 ----MGERVRQFT--NVYIKNFGDKYDEKTLQVMFEKYGVVKSVAVMRDRDGNSRGFGFV 237
Query: 358 AFSTPEEASRALAEMNGKMI 377
A+ + EEA A+ MNG+ I
Sbjct: 238 AYDSHEEAQAAVEAMNGQEI 257
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 98/201 (48%), Gaps = 18/201 (8%)
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENADDAAKAVEA 268
+++V +L T+ L + F + G + S V RD +S + +VNF+ DA +A++
Sbjct: 13 SLYVGDLHLDVTEAMLYEKFSQAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALDT 72
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
+N R + +Q+ + G N++IKNL SID++ L
Sbjct: 73 MNYDPIKGRPIRIMWSQRDPSLRKSGVG----------------NIFIKNLDKSIDNKAL 116
Query: 329 KELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
+ FS FG I SCKV + +G SKG GFV F T E RA+ ++NG ++ K ++V
Sbjct: 117 YDTFSAFGNILSCKVSCNENG-SKGYGFVHFETEEAGIRAIEKVNGMLLNDKKVFVGKFL 175
Query: 389 RKEERRARLQAQFSQMRPVAM 409
+ ER ++ + Q V +
Sbjct: 176 TRSERIKKMGERVRQFTNVYI 196
>gi|74199920|dbj|BAE20776.1| unnamed protein product [Mus musculus]
Length = 266
Score = 294 bits (753), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 145/256 (56%), Positives = 192/256 (75%), Gaps = 3/256 (1%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL +VT++ LY+ FS G +LS+RV RD+ TRRSLGY VN+ PADA RALD
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSSAGPILSIRVYRDVITRRSLGYASVNFEQPADAERALDT 71
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF + K +RIM+S RDPS+R+SG GN+FIKNL+K+ID+KAL+DTFS+FGNILSCK+
Sbjct: 72 MNFDVIKGKPVRIMWSQRDPSLRRSGVGNVFIKNLNKTIDNKALYDTFSAFGNILSCKVV 131
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET-VAIKTK-F 208
+D +G SKG GFV FE +E+A+ AI+K+NGML+ND++VFVG F ++ERE + TK F
Sbjct: 132 SDENG-SKGHGFVHFETEEAAERAIEKMNGMLLNDRKVFVGRFKSQKEREAELGTGTKEF 190
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NV++KN + DE L +FG +G I S VM D GKSK FGFV+FE +DA KAV+
Sbjct: 191 TNVYIKNFGDRMDDETLNGLFGRFGQILSVKVMTDEGGKSKGFGFVSFERHEDAQKAVDE 250
Query: 269 LNGKKFDDREWYVGKA 284
+NGK+ + + YVG+A
Sbjct: 251 MNGKELNGKHIYVGRA 266
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 101/270 (37%), Positives = 151/270 (55%), Gaps = 16/270 (5%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDK 177
++++ +L + L++ FSS G ILS ++ D + +S G+ V FE A+ A+D
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSSAGPILSIRVYRDVITRRSLGYASVNFEQPADAERALDT 71
Query: 178 LNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITS 237
+N +I K V + +R+ ++ NVF+KNL+++ ++ L F +G I S
Sbjct: 72 MNFDVIKGKPVRI----MWSQRDPSLRRSGVGNVFIKNLNKTIDNKALYDTFSAFGNILS 127
Query: 238 AVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQ 297
V+ D +G SK GFV+FE + A +A+E +NG +DR+ +VG+ + + ERE EL
Sbjct: 128 CKVVSDENG-SKGHGFVHFETEEAAERAIEKMNGMLLNDRKVFVGRFKSQKEREAELG-- 184
Query: 298 FEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFV 357
KE N+YIKN GD +DDE L LF FG I S KVM D G SKG GFV
Sbjct: 185 --TGTKEFT------NVYIKNFGDRMDDETLNGLFGRFGQILSVKVMTDEGGKSKGFGFV 236
Query: 358 AFSTPEEASRALAEMNGKMIVSKPLYVAVA 387
+F E+A +A+ EMNGK + K +YV A
Sbjct: 237 SFERHEDAQKAVDEMNGKELNGKHIYVGRA 266
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 101/193 (52%), Gaps = 26/193 (13%)
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENADDAAKAVEA 268
+++V +L T+ L + F G I S V RD +S + VNFE DA +A++
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSSAGPILSIRVYRDVITRRSLGYASVNFEQPADAERALDT 71
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVD---KFQGL-NLYIKNLGDSID 324
+N FD +KG+ + M D + G+ N++IKNL +ID
Sbjct: 72 MN---FD-----------------VIKGKPVRIMWSQRDPSLRRSGVGNVFIKNLNKTID 111
Query: 325 DEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYV 384
++ L + FS FG I SCKV+ D +G SKG GFV F T E A RA+ +MNG ++ + ++V
Sbjct: 112 NKALYDTFSAFGNILSCKVVSDENG-SKGHGFVHFETEEAAERAIEKMNGMLLNDRKVFV 170
Query: 385 AVAQRKEERRARL 397
+ ++ER A L
Sbjct: 171 GRFKSQKEREAEL 183
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
T++Y+ + + D L LF + GQ+LSV+V D +S G+G+V++ DA +A+D
Sbjct: 191 TNVYIKNFGDRMDDETLNGLFGRFGQILSVKVMTD-EGGKSKGFGFVSFERHEDAQKAVD 249
Query: 90 VLNFTPLNNKSIRI 103
+N LN K I +
Sbjct: 250 EMNGKELNGKHIYV 263
>gi|124806145|ref|XP_001350640.1| polyadenylate-binding protein, putative [Plasmodium falciparum 3D7]
gi|23496765|gb|AAN36320.1|AE014847_47 polyadenylate-binding protein, putative [Plasmodium falciparum 3D7]
gi|119352249|gb|ABL63812.1| polyadenylate-binding protein [Plasmodium falciparum]
Length = 875
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 142/250 (56%), Positives = 189/250 (75%), Gaps = 4/250 (1%)
Query: 27 FLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAAR 86
F T SLYVGDL+ +VT++ LY++F+ VG V S+RVCRD TR+SLGY YVNY N ADA R
Sbjct: 13 FSTASLYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRDSVTRKSLGYAYVNYHNLADAER 72
Query: 87 ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
ALD LN+T + + R+M+SHRDPS+RKSGTGNIF+KNLDKSID+KAL DTFS FGNILS
Sbjct: 73 ALDTLNYTNIKGQPARLMWSHRDPSLRKSGTGNIFVKNLDKSIDNKALFDTFSMFGNILS 132
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKT 206
CK+ATD G+SK +GFV +E++ESA+ AI+K+NG+ + K V+VG F++K ER T T
Sbjct: 133 CKVATDEFGKSKSYGFVHYEDEESAKEAIEKVNGVQLGSKNVYVGPFIKKSERATN--DT 190
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
KF N++VKN +S T+ L+++F YG ITS +V D K++ F F+N+ +A+ A A+
Sbjct: 191 KFTNLYVKNFPDSVTETHLRQLFNPYGEITSMIVKM--DNKNRKFCFINYADAESAKNAM 248
Query: 267 EALNGKKFDD 276
+ LNGKK D
Sbjct: 249 DNLNGKKITD 258
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 73/152 (48%), Positives = 97/152 (63%), Gaps = 1/152 (0%)
Query: 280 YVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTIT 339
YVG Q ++ R LK +F+ E +K QG+NLYIKNL D IDD L+ELF FGTIT
Sbjct: 418 YVGPHQSRARRHAILKAKFDNLNVENKNKHQGVNLYIKNLDDGIDDIMLRELFEPFGTIT 477
Query: 340 SCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQA 399
S KVMRD SKG GFV F++ EEA++A+ EM+ K+I KPLYV +A+++E+R +RLQ
Sbjct: 478 SAKVMRDEKEQSKGFGFVCFASQEEANKAVTEMHLKIINGKPLYVGLAEKREQRLSRLQQ 537
Query: 400 QFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQF 431
+F +M P+ + P PM P QF
Sbjct: 538 RF-RMHPIRHHMNNPLNTPMQYASPQSPQLQF 568
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 140/263 (53%), Gaps = 21/263 (7%)
Query: 117 TGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAI 175
T ++++ +L++ + L++ F++ G++ S ++ D + +S G+ +V + N A+ A+
Sbjct: 15 TASLYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRDSVTRKSLGYAYVNYHNLADAERAL 74
Query: 176 DKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTI 235
D LN I + L R+ K+ N+FVKNLD+S ++ L F +G I
Sbjct: 75 DTLNYTNIKGQPAR----LMWSHRDPSLRKSGTGNIFVKNLDKSIDNKALFDTFSMFGNI 130
Query: 236 TSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELK 295
S V D GKSK +GFV++E+ + A +A+E +NG + + YVG KKSER
Sbjct: 131 LSCKVATDEFGKSKSYGFVHYEDEESAKEAIEKVNGVQLGSKNVYVGPFIKKSER----- 185
Query: 296 GQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSG 355
A +T KF NLY+KN DS+ + L++LF+ +G ITS V D ++
Sbjct: 186 -----ATNDT--KF--TNLYVKNFPDSVTETHLRQLFNPYGEITSMIVKMDNK--NRKFC 234
Query: 356 FVAFSTPEEASRALAEMNGKMIV 378
F+ ++ E A A+ +NGK I
Sbjct: 235 FINYADAESAKNAMDNLNGKKIT 257
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 94/188 (50%), Gaps = 25/188 (13%)
Query: 211 VFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENADDAAKAVEAL 269
++V +L+E T+ L +IF G ++S V RD KS + +VN+ N DA +A++ L
Sbjct: 18 LYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRDSVTRKSLGYAYVNYHNLADAERALDTL 77
Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVD----KFQGLNLYIKNLGDSIDD 325
N Y +KGQ + M D K N+++KNL SID+
Sbjct: 78 N---------YTN-----------IKGQPARLMWSHRDPSLRKSGTGNIFVKNLDKSIDN 117
Query: 326 EKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVA 385
+ L + FS FG I SCKV D G SK GFV + E A A+ ++NG + SK +YV
Sbjct: 118 KALFDTFSMFGNILSCKVATDEFGKSKSYGFVHYEDEESAKEAIEKVNGVQLGSKNVYVG 177
Query: 386 VAQRKEER 393
+K ER
Sbjct: 178 PFIKKSER 185
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 59/89 (66%)
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEAL 269
N+++KNLD+ D L+++F +GTITSA VMRD +SK FGFV F + ++A KAV +
Sbjct: 451 NLYIKNLDDGIDDIMLRELFEPFGTITSAKVMRDEKEQSKGFGFVCFASQEEANKAVTEM 510
Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQF 298
+ K + + YVG A+K+ +R L+ +F
Sbjct: 511 HLKIINGKPLYVGLAEKREQRLSRLQQRF 539
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 51/81 (62%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKL 178
N++IKNLD ID L + F FG I S K+ D QSKGFGFV F ++E A A+ ++
Sbjct: 451 NLYIKNLDDGIDDIMLRELFEPFGTITSAKVMRDEKEQSKGFGFVCFASQEEANKAVTEM 510
Query: 179 NGMLINDKQVFVGHFLRKQER 199
+ +IN K ++VG ++++R
Sbjct: 511 HLKIINGKPLYVGLAEKREQR 531
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 42/58 (72%)
Query: 511 QRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLR 568
Q+ +LGE+L+PLV A K+TGM+LEMD +E+L LLE+ E LK K+ EA+ VL+
Sbjct: 815 QKQVLGENLFPLVANYHPTLAGKITGMMLEMDNSELLILLENEEQLKKKIDEALVVLQ 872
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
N+ +LY+ +LD + D L +LF G + S +V RD +S G+G+V +A+ +A
Sbjct: 445 NKHQGVNLYIKNLDDGIDDIMLRELFEPFGTITSAKVMRD-EKEQSKGFGFVCFASQEEA 503
Query: 85 ARALDVLNFTPLNNKSIRI 103
+A+ ++ +N K + +
Sbjct: 504 NKAVTEMHLKIINGKPLYV 522
>gi|330843410|ref|XP_003293648.1| hypothetical protein DICPUDRAFT_158538 [Dictyostelium purpureum]
gi|325076001|gb|EGC29827.1| hypothetical protein DICPUDRAFT_158538 [Dictyostelium purpureum]
Length = 735
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 163/374 (43%), Positives = 235/374 (62%), Gaps = 34/374 (9%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQ--VLSVRVCRDLSTRRSLGYGYVNYANPADAARA 87
TSLYVGDL +V + L +LFS+VG+ + S+ VCRD +T RSLGY YVN+ N DA RA
Sbjct: 120 TSLYVGDLASDVNEVVLNELFSKVGRNAIASIHVCRDSNTYRSLGYAYVNFYNNHDAERA 179
Query: 88 LDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSC 147
LD LN++ ++ K RIM+S+RDP+ RK+ GN+F+KNL+K++D+ L+D FSSFGNILSC
Sbjct: 180 LDTLNYSMIHGKPCRIMWSYRDPTKRKTNVGNVFVKNLEKAVDNAMLYDVFSSFGNILSC 239
Query: 148 KIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK 207
K+ + G SKG+G+V FE ES+ AI+++NG L+ K +F F+ K ER V
Sbjct: 240 KVEYE-KGISKGYGYVHFETSESSGKAIERINGTLVLGKPIFCEPFVAKVERYKVE---- 294
Query: 208 FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAK--A 265
N VF +N DES T E +++ ++G I + D GKSK G V F+N +DA K A
Sbjct: 295 -NKVFFRNADESVTQEMIQEELSKFGEIEICTLKIDSTGKSKGLGTVEFKNCEDAQKLLA 353
Query: 266 VEA----LNGK--KFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
VEA +NGK FD + + K ER EL+ K+T D+ L++ N+
Sbjct: 354 VEADSIQINGKPITFD-------RVKNKIERVTELR-------KKTTDQ----TLFLSNI 395
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
+SI+ E +KE FS+ G I CK+++D SG +KG GF+ FS EA++AL +NG +
Sbjct: 396 DESIEKETIKEEFSKHGAIIGCKIVQDESGKNKGYGFITFSEVSEANKALEALNGFTFGN 455
Query: 380 KPLYVAVAQRKEER 393
K + V+++ KE++
Sbjct: 456 KQITVSLSSNKEQQ 469
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 91/182 (50%), Gaps = 19/182 (10%)
Query: 32 LYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV- 90
++ + D +VT + + S+ G++ + D ST +S G G V + N DA + L V
Sbjct: 297 VFFRNADESVTQEMIQEELSKFGEIEICTLKID-STGKSKGLGTVEFKNCEDAQKLLAVE 355
Query: 91 ----------LNFTPLNNKSIRIMYSHRDPSIRKSGTG-NIFIKNLDKSIDHKALHDTFS 139
+ F + NK R+ +RK T +F+ N+D+SI+ + + + FS
Sbjct: 356 ADSIQINGKPITFDRVKNKIERVT------ELRKKTTDQTLFLSNIDESIEKETIKEEFS 409
Query: 140 SFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER 199
G I+ CKI D SG++KG+GF+ F A A++ LNG +KQ+ V K+++
Sbjct: 410 KHGAIIGCKIVQDESGKNKGYGFITFSEVSEANKALEALNGFTFGNKQITVSLSSNKEQQ 469
Query: 200 ET 201
T
Sbjct: 470 LT 471
Score = 45.4 bits (106), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 310 QGLNLYIKNLGDSIDDEKLKELFSEFG--TITSCKVMRDPSGI-SKGSGFVAFSTPEEAS 366
Q +LY+ +L +++ L ELFS+ G I S V RD + S G +V F +A
Sbjct: 118 QLTSLYVGDLASDVNEVVLNELFSKVGRNAIASIHVCRDSNTYRSLGYAYVNFYNNHDAE 177
Query: 367 RALAEMNGKMIVSKPLYVAVAQRKEERR 394
RAL +N MI KP + + R +R
Sbjct: 178 RALDTLNYSMIHGKPCRIMWSYRDPTKR 205
>gi|345316987|ref|XP_003429815.1| PREDICTED: embryonic polyadenylate-binding protein A-like
[Ornithorhynchus anatinus]
Length = 540
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 150/336 (44%), Positives = 200/336 (59%), Gaps = 62/336 (18%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+G + SLYVGDL +VT++ LY+ FS G ++S+RVCRD+++RRSLGY Y+N+ P
Sbjct: 3 ATGAGYPLASLYVGDLHVDVTEAMLYEKFSPAGSIISIRVCRDVASRRSLGYAYINFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + + IRIM+S RDP +RKSG GNIFIKNLD SID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFEVIKGRPIRIMWSQRDPGLRKSGVGNIFIKNLDDSIDNKALYDTFSTF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQV------------- 188
GNILSCK+ D G S+GFGFV FE +E+A AI +NGML+ND++V
Sbjct: 123 GNILSCKVVCDEHG-SRGFGFVHFETREAASQAISTMNGMLLNDRKVGAQPCCPAGRVGS 181
Query: 189 ---------------------------------FVGHFLRKQERETVAIKTKFN------ 209
+VG ++ ER++ +K KF
Sbjct: 182 GKRPPSGRSRPAGPVPAQAVTSMNGKELNGRVLYVGRAQKRTERQS-ELKRKFEQIKQER 240
Query: 210 -------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDA 262
N++VKNLD+ DE L+K F YGTITSA VM + G SK FGFV F + ++A
Sbjct: 241 VNRYQGVNLYVKNLDDCIDDEKLRKEFSPYGTITSAKVMTE-SGHSKGFGFVCFSSPEEA 299
Query: 263 AKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQF 298
KAV +NG+ + YV AQ+K ER+ L Q+
Sbjct: 300 TKAVTEMNGRIVSTKPLYVALAQRKEERKAILTNQY 335
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 143/400 (35%), Positives = 217/400 (54%), Gaps = 67/400 (16%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATD-GSGQSKGFGFVQFENKESAQNAIDK 177
++++ +L + L++ FS G+I+S ++ D S +S G+ ++ F+ A+ A+D
Sbjct: 12 SLYVGDLHVDVTEAMLYEKFSPAGSIISIRVCRDVASRRSLGYAYINFQQPADAERALDT 71
Query: 178 LNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITS 237
+N +I + + + +R+ K+ N+F+KNLD+S ++ L F +G I S
Sbjct: 72 MNFEVIKGRPIRIMW----SQRDPGLRKSGVGNIFIKNLDDSIDNKALYDTFSTFGNILS 127
Query: 238 AVVMRDGDGKSKCFGFVNFENADDA----------------------------------- 262
V+ D G S+ FGFV+FE + A
Sbjct: 128 CKVVCDEHG-SRGFGFVHFETREAASQAISTMNGMLLNDRKVGAQPCCPAGRVGSGKRPP 186
Query: 263 -----------AKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQG 311
A+AV ++NGK+ + R YVG+AQK++ER+ ELK +FEQ +E V+++QG
Sbjct: 187 SGRSRPAGPVPAQAVTSMNGKELNGRVLYVGRAQKRTERQSELKRKFEQIKQERVNRYQG 246
Query: 312 LNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAE 371
+NLY+KNL D IDDEKL++ FS +GTITS KVM + SG SKG GFV FS+PEEA++A+ E
Sbjct: 247 VNLYVKNLDDCIDDEKLRKEFSPYGTITSAKVMTE-SGHSKGFGFVCFSSPEEATKAVTE 305
Query: 372 MNGKMIVSKPLYVAVAQRKEERRARLQAQF----SQMRPVA---MGPSVPPRMPMYPPGP 424
MNG+++ +KPLYVA+AQRKEER+A L Q+ S +R + MG P P P
Sbjct: 306 MNGRIVSTKPLYVALAQRKEERKAILTNQYMHRLSTIRTLVAPIMGSFQQPTGYFLPALP 365
Query: 425 SGLGQQFLYGQAPPAIIPPQMPPRG-----HAYRYPLGRN 459
+ YG +P + P + PR AY PL R
Sbjct: 366 QPQTRSTFYGPSP--VDPVRPAPRWAGQTPRAYSTPLMRT 403
>gi|355709043|gb|AES03462.1| poly binding protein, cytoplasmic 1 [Mustela putorius furo]
Length = 230
Score = 285 bits (728), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 138/230 (60%), Positives = 175/230 (76%), Gaps = 3/230 (1%)
Query: 46 LYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMY 105
LY+ FS G +LS+RVCRD+ TRRSLGY YVN+ PADA RALD +NF + K +RIM+
Sbjct: 1 LYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMW 60
Query: 106 SHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQF 165
S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FGNILSCK+ D +G SKG+GFV F
Sbjct: 61 SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHF 119
Query: 166 ENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTKFNNVFVKNLDESTTDE 223
E +E+A+ AI+K+NGML+ND++VFVG F ++ERE A +F NV++KN E DE
Sbjct: 120 ETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDE 179
Query: 224 DLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKK 273
LK +FG++G S VM D GKSK FGFV+FE +DA KAV+ +NGK+
Sbjct: 180 RLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKE 229
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 94/243 (38%), Positives = 144/243 (59%), Gaps = 16/243 (6%)
Query: 134 LHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGH 192
L++ FS G ILS ++ D + +S G+ +V F+ A+ A+D +N +I K V +
Sbjct: 1 LYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMW 60
Query: 193 FLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFG 252
+R+ K+ N+F+KNLD+S ++ L F +G I S V+ D +G SK +G
Sbjct: 61 ----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYG 115
Query: 253 FVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGL 312
FV+FE + A +A+E +NG +DR+ +VG+ + + ERE EL + ++
Sbjct: 116 FVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFT---------- 165
Query: 313 NLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEM 372
N+YIKN G+ +DDE+LK+LF +FG S KVM D SG SKG GFV+F E+A +A+ EM
Sbjct: 166 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEM 225
Query: 373 NGK 375
NGK
Sbjct: 226 NGK 228
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 91/156 (58%), Gaps = 8/156 (5%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ +LD ++ + LYD FS G +LS +V D + S GYG+V++ A RA++
Sbjct: 74 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEK 131
Query: 91 LNFTPLNNKSIRI----MYSHRDPSI--RKSGTGNIFIKNLDKSIDHKALHDTFSSFGNI 144
+N LN++ + + R+ + R N++IKN + +D + L D F FG
Sbjct: 132 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPA 191
Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNG 180
LS K+ TD SG+SKGFGFV FE E AQ A+D++NG
Sbjct: 192 LSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNG 227
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 100/188 (53%), Gaps = 22/188 (11%)
Query: 225 LKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGK 283
L + F G I S V RD +S + +VNF+ DA +A++ +N FD GK
Sbjct: 1 LYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMN---FD---VIKGK 54
Query: 284 AQK--KSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSC 341
+ S+R+ L+ K V N++IKNL SID++ L + FS FG I SC
Sbjct: 55 PVRIMWSQRDPSLR-------KSGVG-----NIFIKNLDKSIDNKALYDTFSAFGNILSC 102
Query: 342 KVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQF 401
KV+ D +G SKG GFV F T E A RA+ +MNG ++ + ++V + ++ER A L A+
Sbjct: 103 KVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARA 161
Query: 402 SQMRPVAM 409
+ V +
Sbjct: 162 KEFTNVYI 169
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 44/72 (61%), Gaps = 3/72 (4%)
Query: 21 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYAN 80
GA +F T++Y+ + ++ D +L DLF + G LSV+V D S +S G+G+V++
Sbjct: 158 GARAKEF--TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESG-KSKGFGFVSFER 214
Query: 81 PADAARALDVLN 92
DA +A+D +N
Sbjct: 215 HEDAQKAVDEMN 226
>gi|449016981|dbj|BAM80383.1| polyadenylate-binding protein [Cyanidioschyzon merolae strain 10D]
Length = 999
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 168/393 (42%), Positives = 227/393 (57%), Gaps = 40/393 (10%)
Query: 19 AAGASGN-QFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVN 77
AA ASG + SLYVGDL +V + L++LFS VG V+SVRVCRD+ TRRSLGY YVN
Sbjct: 164 AASASGTGELPNVSLYVGDLQPDVVEQNLFELFSSVGPVVSVRVCRDVVTRRSLGYAYVN 223
Query: 78 YANPADAARALDVLNF--TPLN-NKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKAL 134
+ NP DA RA+DVL F PL NK IRIM+ DPS R++ GNIFIKNLDKSID+KAL
Sbjct: 224 FQNPEDAERAIDVLQFYEGPLTKNKPIRIMWKRSDPSQRRNPEGNIFIKNLDKSIDNKAL 283
Query: 135 HDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFL 194
+DTFS+FG +LSCK+ATD G S G+ FV +++ A+ I K+NGML+N ++V+VG F
Sbjct: 284 YDTFSTFGKVLSCKLATDDKGNSLGYAFVHYQDANVAKYVISKMNGMLLNGQKVYVGEFR 343
Query: 195 RKQERE-TVAIKTKFNNVFVKNLDES-TTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFG 252
++ERE T + TKF NV+VKNLDES T E++ K+F YG ITS
Sbjct: 344 PRREREATGELSTKFTNVYVKNLDESLCTTEEVTKLFAPYGNITSI-------------- 389
Query: 253 FVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGL 312
F+ E + E D+ +A ++ R+ + + A + + L
Sbjct: 390 FIPTETVQEQQPHHE-------DEHRAPSEEASSEAGRQGGSSQEVKSAGADQSNAAPDL 442
Query: 313 NLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEM 372
+N D K E + ++ + +G FV F TPE+A+ A+ +
Sbjct: 443 ETSERN-----DGAKAPENRAHAQSVVRVR--------PRGFAFVNFETPEQAAAAVEAL 489
Query: 373 NGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
NG + K LYV AQ+K ER A L+AQ Q+R
Sbjct: 490 NGMELNGKTLYVGRAQKKAEREAMLRAQMEQLR 522
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 147/429 (34%), Positives = 226/429 (52%), Gaps = 59/429 (13%)
Query: 32 LYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVL 91
+++ +LD ++ + LYD FS G+VLS ++ D SLGY +V+Y + A + +
Sbjct: 269 IFIKNLDKSIDNKALYDTFSTFGKVLSCKLATD-DKGNSLGYAFVHYQDANVAKYVISKM 327
Query: 92 NFTPLNNKSIRIMYSHRDPSIRKSGTG-------NIFIKNLDKSI-DHKALHDTFSSFGN 143
N LN + + + P + TG N+++KNLD+S+ + + F+ +GN
Sbjct: 328 NGMLLNGQKVYV--GEFRPRREREATGELSTKFTNVYVKNLDESLCTTEEVTKLFAPYGN 385
Query: 144 ILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVA 203
I S F+ E + Q + D+ H +E + A
Sbjct: 386 ITSI--------------FIPTETVQEQQPHHE--------DE-----HRAPSEEASSEA 418
Query: 204 IKTKFNNVFVKNL--DESTTDEDLK--------KIFGEYGTITSAVVMRDGDGKSKCFGF 253
+ ++ VK+ D+S DL+ K S V +R + F F
Sbjct: 419 GRQGGSSQEVKSAGADQSNAAPDLETSERNDGAKAPENRAHAQSVVRVRP-----RGFAF 473
Query: 254 VNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLN 313
VNFE + AA AVEALNG + + + YVG+AQKK+ERE L+ Q EQ + + K Q +N
Sbjct: 474 VNFETPEQAAAAVEALNGMELNGKTLYVGRAQKKAEREAMLRAQMEQLRNDRMQKLQDVN 533
Query: 314 LYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMN 373
L++KNL D +D+ +L+E FS FGTITS ++MRD G+SKG GFVAFS P+EA +A+ EMN
Sbjct: 534 LFVKNLSDDVDENRLREEFSRFGTITSLRIMRDEKGVSKGFGFVAFSHPDEAIKAVTEMN 593
Query: 374 GKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMP--MYPPG---PSGLG 428
+++ KP+YVA+AQRK++RRA+++AQ + M M +PP + MY PG P+ G
Sbjct: 594 QRIVGQKPIYVALAQRKDQRRAQIEAQRAAMMRAQMS-FLPPGLAASMYVPGTGMPTPSG 652
Query: 429 QQFLYGQAP 437
+ Y P
Sbjct: 653 YPYPYAVHP 661
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/194 (41%), Positives = 104/194 (53%), Gaps = 35/194 (18%)
Query: 386 VAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPG-PSGLGQQFLYGQAPPAIIPPQ 444
VA R R+AR+ A+ M P A GP MP G P+GLG AP
Sbjct: 800 VAGRAGPRQARMAAR---MGP-ASGPMPGVSMPAMASGLPTGLG-------AP------- 841
Query: 445 MPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALSTAL- 503
G Y+ +G M+ P AG + P+ GAG ++G M +A S L
Sbjct: 842 ----GMGYK--MGGAMRAPPGGTMAGMVAMSPMTAGAGNTVPSGAMGNMMIGSAASQPLT 895
Query: 504 ----ANASPEQQRTLLGESLYPLVEQL-----ERDAAAKVTGMLLEMDQTEVLHLLESPE 554
ANA P+QQ+ +LGE LYPLV Q +R+ A K+TGMLLEMD +EVLHL+ESPE
Sbjct: 896 VQMLANADPKQQKQILGERLYPLVYQQLVREGKRELAPKITGMLLEMDNSEVLHLVESPE 955
Query: 555 ALKAKVAEAMEVLR 568
AL+ KV EA+EVL+
Sbjct: 956 ALQEKVEEALEVLQ 969
>gi|328715672|ref|XP_001946271.2| PREDICTED: polyadenylate-binding protein 1-like [Acyrthosiphon
pisum]
Length = 964
Score = 281 bits (718), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 154/334 (46%), Positives = 223/334 (66%), Gaps = 22/334 (6%)
Query: 118 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDK 177
G + K +++ + K +H L +A D +G SKG+GFV FE K+SA +I+K
Sbjct: 404 GGVQTKCKEQNSNIKYIHCYAHCLNLALVDSVAQDETGNSKGYGFVHFETKQSATQSIEK 463
Query: 178 LNGMLINDKQVFVGHFLRKQERET-VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTI 235
+NGML+N K+VFVG F+ + +RE + + K + NV++KN+DE+ +++L ++F +YGTI
Sbjct: 464 VNGMLLNGKKVFVGRFVGRNDREKELGQQAKLYTNVYIKNIDENVNEKELFEMFKKYGTI 523
Query: 236 TSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKF-DDREWYVGKAQKKSEREQEL 294
TS VM DG S+ FGFV FE+ +A KAV L+GKK + + +YV +AQKK+ER+QEL
Sbjct: 524 TSCKVMFKDDGSSRGFGFVAFEDPKEAEKAVTELHGKKSPEGKTYYVNRAQKKTERQQEL 583
Query: 295 KGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGS 354
K +FEQ E ++++QG+NLY+KNL D+IDDE+L+ FS FGTI S KVM D G SKG
Sbjct: 584 KRKFEQYKIERINRYQGVNLYVKNLDDTIDDERLRREFSAFGTIKSAKVMMD-DGRSKGF 642
Query: 355 GFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQ----MRPVAMG 410
GFV FS+PEEA++A+ +MNG+++ +KPLYV +AQRK++R+A L +Q+SQ MR ++G
Sbjct: 643 GFVYFSSPEEATKAVTDMNGRIVGTKPLYVTLAQRKKDRKAHLDSQYSQRNTNMRMQSIG 702
Query: 411 PSVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPPQ 444
P+Y PG S G P I PQ
Sbjct: 703 -------PIYQPGASN-------GYFVPTIPQPQ 722
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 89/254 (35%), Positives = 143/254 (56%), Gaps = 22/254 (8%)
Query: 67 TRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI-MYSHRDPSIRKSGT-----GNI 120
T S GYG+V++ A ++++ +N LN K + + + R+ ++ G N+
Sbjct: 440 TGNSKGYGFVHFETKQSATQSIEKVNGMLLNGKKVFVGRFVGRNDREKELGQQAKLYTNV 499
Query: 121 FIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNG 180
+IKN+D++++ K L + F +G I SCK+ G S+GFGFV FE+ + A+ A+ +L+G
Sbjct: 500 YIKNIDENVNEKELFEMFKKYGTITSCKVMFKDDGSSRGFGFVAFEDPKEAEKAVTELHG 559
Query: 181 MLIND-KQVFVGHFLRKQERETVAIKTKFN-------------NVFVKNLDESTTDEDLK 226
+ K +V +K ER+ +K KF N++VKNLD++ DE L+
Sbjct: 560 KKSPEGKTYYVNRAQKKTERQQ-ELKRKFEQYKIERINRYQGVNLYVKNLDDTIDDERLR 618
Query: 227 KIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQK 286
+ F +GTI SA VM D DG+SK FGFV F + ++A KAV +NG+ + YV AQ+
Sbjct: 619 REFSAFGTIKSAKVMMD-DGRSKGFGFVYFSSPEEATKAVTDMNGRIVGTKPLYVTLAQR 677
Query: 287 KSEREQELKGQFEQ 300
K +R+ L Q+ Q
Sbjct: 678 KKDRKAHLDSQYSQ 691
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 56/75 (74%), Gaps = 2/75 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA T LA A PE Q+ +LGE L+PL+E++ + K+TGMLLE+D +++LH+LE E
Sbjct: 888 PLTA--TMLATAKPEDQKQMLGERLFPLIERMYPELTGKITGMLLEIDNSDLLHMLEHHE 945
Query: 555 ALKAKVAEAMEVLRS 569
+LK +V +A+ +L++
Sbjct: 946 SLKNQVEKAVAMLQA 960
Score = 45.8 bits (107), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 17/112 (15%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
N++ +LYV +LD + D +L FS G + S +V D RS G+G+V +++P +A
Sbjct: 596 NRYQGVNLYVKNLDDTIDDERLRREFSAFGTIKSAKVMMDDG--RSKGFGFVYFSSPEEA 653
Query: 85 ARALDVLNFTPLNNKSIRIM---------------YSHRDPSIRKSGTGNIF 121
+A+ +N + K + + YS R+ ++R G I+
Sbjct: 654 TKAVTDMNGRIVGTKPLYVTLAQRKKDRKAHLDSQYSQRNTNMRMQSIGPIY 705
>gi|340386042|ref|XP_003391517.1| PREDICTED: polyadenylate-binding protein 1-like, partial
[Amphimedon queenslandica]
Length = 393
Score = 278 bits (710), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 133/256 (51%), Positives = 186/256 (72%), Gaps = 1/256 (0%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL +V ++ L+D FS+ G VLS+ VCRDL T+RSLGY Y+ + PADA RA D
Sbjct: 12 SLYVGDLLPDVNEADLFDHFSKAGPVLSICVCRDLITKRSLGYAYIYFQQPADAERAFDT 71
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+N+ P+ + IM+S RDPS+R+S G+IFIKNL++SIDHKAL+DTFS+FGNILSCK+A
Sbjct: 72 MNYEPIKGQPCYIMWSQRDPSLRRSRAGHIFIKNLERSIDHKALYDTFSAFGNILSCKVA 131
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNN 210
TD +GQSKG GFV F+ +E+A AI+K+NG L+N+++V VG F+ +++R + N
Sbjct: 132 TDLNGQSKGIGFVHFDEQEAADLAIEKVNGQLLNNRKVHVGKFIPRKDRSHTGFNQHYTN 191
Query: 211 -VFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEAL 269
VFVKN E TDE L F ++G+I +AVVM+D +G SK FGFV+FE+ + A+ AV+A+
Sbjct: 192 VVFVKNFGEDFTDEMLYNFFEKFGSIAAAVVMKDNEGVSKDFGFVSFESHEAASAAVQAV 251
Query: 270 NGKKFDDREWYVGKAQ 285
+ + R+ Y +A
Sbjct: 252 HSSIVNGRQVYCSRAH 267
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 139/271 (51%), Gaps = 16/271 (5%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATD-GSGQSKGFGFVQFENKESAQNAIDK 177
++++ +L ++ L D FS G +LS + D + +S G+ ++ F+ A+ A D
Sbjct: 12 SLYVGDLLPDVNEADLFDHFSKAGPVLSICVCRDLITKRSLGYAYIYFQQPADAERAFDT 71
Query: 178 LNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITS 237
+N I + ++ +R+ +++ ++F+KNL+ S + L F +G I S
Sbjct: 72 MNYEPIKGQPCYI----MWSQRDPSLRRSRAGHIFIKNLERSIDHKALYDTFSAFGNILS 127
Query: 238 AVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQ 297
V D +G+SK GFV+F+ + A A+E +NG+ ++R+ +VGK + +R
Sbjct: 128 CKVATDLNGQSKGIGFVHFDEQEAADLAIEKVNGQLLNNRKVHVGKFIPRKDRSHT---G 184
Query: 298 FEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFV 357
F Q V ++KN G+ DE L F +FG+I + VM+D G+SK GFV
Sbjct: 185 FNQHYTNVV--------FVKNFGEDFTDEMLYNFFEKFGSIAAAVVMKDNEGVSKDFGFV 236
Query: 358 AFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
+F + E AS A+ ++ ++ + +Y + A
Sbjct: 237 SFESHEAASAAVQAVHSSIVNGRQVYCSRAH 267
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 94/195 (48%), Gaps = 20/195 (10%)
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGK-SKCFGFVNFENADDAAKAVEA 268
+++V +L + DL F + G + S V RD K S + ++ F+ DA +A +
Sbjct: 12 SLYVGDLLPDVNEADLFDHFSKAGPVLSICVCRDLITKRSLGYAYIYFQQPADAERAFDT 71
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
+N + + Y+ +Q+ + G ++IKNL SID + L
Sbjct: 72 MNYEPIKGQPCYIMWSQRDPSLRRSRAGH----------------IFIKNLERSIDHKAL 115
Query: 329 KELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
+ FS FG I SCKV D +G SKG GFV F E A A+ ++NG+++ ++ ++V
Sbjct: 116 YDTFSAFGNILSCKVATDLNGQSKGIGFVHFDEQEAADLAIEKVNGQLLNNRKVHVG--- 172
Query: 389 RKEERRARLQAQFSQ 403
+ R+ R F+Q
Sbjct: 173 KFIPRKDRSHTGFNQ 187
Score = 38.9 bits (89), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
NQ T ++V + + TD LY+ F + G + + V +D + S +G+V++ + A
Sbjct: 186 NQHYTNVVFVKNFGEDFTDEMLYNFFEKFGSIAAAVVMKD-NEGVSKDFGFVSFESHEAA 244
Query: 85 ARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGT 117
+ A+ ++ + +N + + +H PS GT
Sbjct: 245 SAAVQAVHSSIVNGRQVYCSRAHSMPSSLMDGT 277
>gi|91805911|gb|ABE65684.1| polyadenylate-binding protein [Arabidopsis thaliana]
Length = 267
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 136/256 (53%), Positives = 188/256 (73%), Gaps = 4/256 (1%)
Query: 88 LDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSC 147
++VLN+ L K +RIM+S RDPS R SG GN+F+KNLD+SID+K L D FS+FG +LSC
Sbjct: 1 MEVLNYCKLKGKPMRIMFSERDPSNRMSGRGNVFVKNLDESIDNKQLCDMFSAFGKVLSC 60
Query: 148 KIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK 207
K+A D SG SKG+GFVQF + S A + NG LI ++ + V F+ + + + +
Sbjct: 61 KVARDASGVSKGYGFVQFYSDLSVYTACNFHNGTLIRNQHIHVCPFVSRGQWDKSRV--- 117
Query: 208 FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVE 267
F NV+VKNL E+ TD DLK++FGE+G ITSAVVM+DG+GKS+ FGFVNFE A+ A A+E
Sbjct: 118 FTNVYVKNLVETATDADLKRLFGEFGEITSAVVMKDGEGKSRRFGFVNFEKAEAAVTAIE 177
Query: 268 ALNGKKFDDREWYVGKAQKKSEREQELKGQFE-QAMKETVDKFQGLNLYIKNLGDSIDDE 326
+NG D++E +VG+AQ+K+ R ++LK +FE + + + +G+NLY+KNL DS+D+
Sbjct: 178 KMNGVVVDEKELHVGRAQRKTNRTEDLKAKFELEKIIRDMKTRKGMNLYVKNLDDSVDNT 237
Query: 327 KLKELFSEFGTITSCK 342
KL+ELFSEFGTITSCK
Sbjct: 238 KLEELFSEFGTITSCK 253
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/223 (35%), Positives = 125/223 (56%), Gaps = 17/223 (7%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
+++V +LD ++ + QL D+FS G+VLS +V RD S S GYG+V + + A +
Sbjct: 32 NVFVKNLDESIDNKQLCDMFSAFGKVLSCKVARDASG-VSKGYGFVQFYSDLSVYTACNF 90
Query: 91 LNFTPLNNKSIRIM-YSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKI 149
N T + N+ I + + R + N+++KNL ++ L F FG I S +
Sbjct: 91 HNGTLIRNQHIHVCPFVSRGQWDKSRVFTNVYVKNLVETATDADLKRLFGEFGEITSAVV 150
Query: 150 ATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFN 209
DG G+S+ FGFV FE E+A AI+K+NG+++++K++ VG RK R T +K KF
Sbjct: 151 MKDGEGKSRRFGFVNFEKAEAAVTAIEKMNGVVVDEKELHVGRAQRKTNR-TEDLKAKFE 209
Query: 210 --------------NVFVKNLDESTTDEDLKKIFGEYGTITSA 238
N++VKNLD+S + L+++F E+GTITS
Sbjct: 210 LEKIIRDMKTRKGMNLYVKNLDDSVDNTKLEELFSEFGTITSC 252
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 107/211 (50%), Gaps = 16/211 (7%)
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEAL 269
NVFVKNLDES ++ L +F +G + S V RD G SK +GFV F + A
Sbjct: 32 NVFVKNLDESIDNKQLCDMFSAFGKVLSCKVARDASGVSKGYGFVQFYSDLSVYTACNFH 91
Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLK 329
NG ++ +V + GQ++++ T N+Y+KNL ++ D LK
Sbjct: 92 NGTLIRNQHIHVCPFVSR--------GQWDKSRVFT-------NVYVKNLVETATDADLK 136
Query: 330 ELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQR 389
LF EFG ITS VM+D G S+ GFV F E A A+ +MNG ++ K L+V AQR
Sbjct: 137 RLFGEFGEITSAVVMKDGEGKSRRFGFVNFEKAEAAVTAIEKMNGVVVDEKELHVGRAQR 196
Query: 390 KEERRARLQAQFSQMRPVAMGPSVPPRMPMY 420
K R L+A+F ++ + M +Y
Sbjct: 197 KTNRTEDLKAKF-ELEKIIRDMKTRKGMNLY 226
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 74/152 (48%), Gaps = 18/152 (11%)
Query: 18 VAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVN 77
V+ G + T++YV +L TD+ L LF + G++ S V +D +S +G+VN
Sbjct: 107 VSRGQWDKSRVFTNVYVKNLVETATDADLKRLFGEFGEITSAVVMKD-GEGKSRRFGFVN 165
Query: 78 YANPADAARALDVLNFTPLNNKSIRIMYSHRDPS--------------IRKSGTG---NI 120
+ A A++ +N ++ K + + + R + IR T N+
Sbjct: 166 FEKAEAAVTAIEKMNGVVVDEKELHVGRAQRKTNRTEDLKAKFELEKIIRDMKTRKGMNL 225
Query: 121 FIKNLDKSIDHKALHDTFSSFGNILSCKIATD 152
++KNLD S+D+ L + FS FG I SCK A +
Sbjct: 226 YVKNLDDSVDNTKLEELFSEFGTITSCKYACN 257
>gi|111226286|ref|XP_001134510.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|122096694|sp|Q1ZXC2.1|PAP1B_DICDI RecName: Full=Polyadenylate-binding protein 1-B; Short=PABP-1-B;
Short=Poly(A)-binding protein, cytoplasmic 1-B
gi|90970453|gb|EAS66827.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 814
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 159/381 (41%), Positives = 233/381 (61%), Gaps = 38/381 (9%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQ--VLSVRVCRDLSTRRSLGYGYVNYANPADAARA 87
TSLYVGDL +V + L +LFS+VG+ + S+ VCRD +T RSLGY YVN+ N DA RA
Sbjct: 184 TSLYVGDLAADVNEIILNELFSKVGRNAIASIHVCRDSNTLRSLGYAYVNFFNNHDAERA 243
Query: 88 LDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSC 147
LD LN+T ++ K RIM+S+RDP+ RK+ GNIF+KNL+K +D+ L+DTFSSFGNILSC
Sbjct: 244 LDTLNYTLVHGKPCRIMWSYRDPTKRKTNVGNIFVKNLEKGVDNAMLYDTFSSFGNILSC 303
Query: 148 KIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK 207
K+ + G SKG+G+V FE +SA+ AI+K+NG LI K + V F+ K ER V
Sbjct: 304 KVEFE-KGISKGYGYVHFETNDSAEKAIEKVNGTLILGKPINVERFVSKVERYKVE---- 358
Query: 208 FNNVFVKNLDESTTDEDLKK-IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAK-- 264
N VF +N DES T E L++ + +G I S ++ D +GKSK G V F+N +DA K
Sbjct: 359 -NKVFFRNADESITIEILQQELSNRFGEIESCILKNDANGKSKGLGLVEFKNQEDAQKIL 417
Query: 265 ------AVEALNGK----------KFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDK 308
+ ++G + + + + + + K ER F + K+T D
Sbjct: 418 TESGALIISTIDGTTTVSSNGGTIEINGKPITIDRIKSKVER-------FTEYRKKTTD- 469
Query: 309 FQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRA 368
L+L+I N+ +SID + +KE F++ GTI K+++D + +KG GF++FS +EA +A
Sbjct: 470 ---LSLFINNIDESIDRDLIKEEFAKHGTIIGIKIVQDENARNKGFGFISFSEIQEAQKA 526
Query: 369 LAEMNGKMIVSKPLYVAVAQR 389
L +NG SK + V+ + +
Sbjct: 527 LDSLNGFTFGSKQIQVSFSNK 547
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 152/299 (50%), Gaps = 28/299 (9%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
+++V +L+ V ++ LYD FS G +LS +V + S GYGYV++ A +A++
Sbjct: 275 NIFVKNLEKGVDNAMLYDTFSSFGNILSCKV--EFEKGISKGYGYVHFETNDSAEKAIEK 332
Query: 91 LNFTPLNNKSIRI--MYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSS-FGNILSC 147
+N T + K I + S + R +F +N D+SI + L S+ FG I SC
Sbjct: 333 VNGTLILGKPINVERFVSKVE---RYKVENKVFFRNADESITIEILQQELSNRFGEIESC 389
Query: 148 KIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLI------------------NDKQVF 189
+ D +G+SKG G V+F+N+E AQ + + ++I N K +
Sbjct: 390 ILKNDANGKSKGLGLVEFKNQEDAQKILTESGALIISTIDGTTTVSSNGGTIEINGKPIT 449
Query: 190 VGHFLRKQERET-VAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKS 248
+ K ER T KT ++F+ N+DES + +K+ F ++GTI +++D + ++
Sbjct: 450 IDRIKSKVERFTEYRKKTTDLSLFINNIDESIDRDLIKEEFAKHGTIIGIKIVQDENARN 509
Query: 249 KCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSER-EQELKGQFEQAMKETV 306
K FGF++F +A KA+++LNG F ++ V + K + + +L G + K +
Sbjct: 510 KGFGFISFSEIQEAQKALDSLNGFTFGSKQIQVSFSNKDNNQINNKLNGNSTKITKNII 568
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 94/190 (49%), Gaps = 20/190 (10%)
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYG--TITSAVVMRDGDG-KSKCFGFVNFENADDAA 263
+ +++V +L + L ++F + G I S V RD + +S + +VNF N DA
Sbjct: 182 QLTSLYVGDLAADVNEIILNELFSKVGRNAIASIHVCRDSNTLRSLGYAYVNFFNNHDAE 241
Query: 264 KAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSI 323
+A++ LN + + + + + + G N+++KNL +
Sbjct: 242 RALDTLNYTLVHGKPCRIMWSYRDPTKRKTNVG----------------NIFVKNLEKGV 285
Query: 324 DDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLY 383
D+ L + FS FG I SCKV + GISKG G+V F T + A +A+ ++NG +I+ KP+
Sbjct: 286 DNAMLYDTFSSFGNILSCKVEFE-KGISKGYGYVHFETNDSAEKAIEKVNGTLILGKPIN 344
Query: 384 VAVAQRKEER 393
V K ER
Sbjct: 345 VERFVSKVER 354
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 310 QGLNLYIKNLGDSIDDEKLKELFSEFG--TITSCKVMRDPSGI-SKGSGFVAFSTPEEAS 366
Q +LY+ +L +++ L ELFS+ G I S V RD + + S G +V F +A
Sbjct: 182 QLTSLYVGDLAADVNEIILNELFSKVGRNAIASIHVCRDSNTLRSLGYAYVNFFNNHDAE 241
Query: 367 RALAEMNGKMIVSKPLYVAVAQRKEERR 394
RAL +N ++ KP + + R +R
Sbjct: 242 RALDTLNYTLVHGKPCRIMWSYRDPTKR 269
>gi|5007080|gb|AAD37807.1| poly(A)-binding protein [Oryza sativa]
Length = 183
Score = 275 bits (702), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 126/178 (70%), Positives = 154/178 (86%)
Query: 264 KAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSI 323
+AV+ LNGKKFDD+EWYVG+AQKKS RE ELK +FE+ ++E DK+Q NLY+KNL DS+
Sbjct: 1 QAVQELNGKKFDDKEWYVGRAQKKSGREMELKEKFEKNLQEAADKYQNTNLYLKNLDDSV 60
Query: 324 DDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLY 383
DD+KL+ELF+E+GTITSCKVMRD +G+S+GSGFVAF + E+ASRALAEMN KM+ SKPLY
Sbjct: 61 DDDKLRELFAEYGTITSCKVMRDSNGVSRGSGFVAFKSAEDASRALAEMNSKMVGSKPLY 120
Query: 384 VAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAII 441
VA+AQRKE+R+ARLQAQFSQ+RPV + PSV PRMPM+PPG G+GQQ YGQ PPA I
Sbjct: 121 VALAQRKEDRKARLQAQFSQLRPVPLAPSVGPRMPMFPPGVPGVGQQLFYGQPPPAFI 178
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 56/140 (40%), Positives = 86/140 (61%), Gaps = 14/140 (10%)
Query: 174 AIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKF-------------NNVFVKNLDEST 220
A+ +LNG +DK+ +VG +K RE + +K KF N+++KNLD+S
Sbjct: 2 AVQELNGKKFDDKEWYVGRAQKKSGRE-MELKEKFEKNLQEAADKYQNTNLYLKNLDDSV 60
Query: 221 TDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWY 280
D+ L+++F EYGTITS VMRD +G S+ GFV F++A+DA++A+ +N K + Y
Sbjct: 61 DDDKLRELFAEYGTITSCKVMRDSNGVSRGSGFVAFKSAEDASRALAEMNSKMVGSKPLY 120
Query: 281 VGKAQKKSEREQELKGQFEQ 300
V AQ+K +R+ L+ QF Q
Sbjct: 121 VALAQRKEDRKARLQAQFSQ 140
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 53/83 (63%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKL 178
N+++KNLD S+D L + F+ +G I SCK+ D +G S+G GFV F++ E A A+ ++
Sbjct: 50 NLYLKNLDDSVDDDKLRELFAEYGTITSCKVMRDSNGVSRGSGFVAFKSAEDASRALAEM 109
Query: 179 NGMLINDKQVFVGHFLRKQERET 201
N ++ K ++V RK++R+
Sbjct: 110 NSKMVGSKPLYVALAQRKEDRKA 132
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
+ +++ T+LY+ +LD +V D +L +LF++ G + S +V RD S S G G+V + +
Sbjct: 42 AADKYQNTNLYLKNLDDSVDDDKLRELFAEYGTITSCKVMRD-SNGVSRGSGFVAFKSAE 100
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHR 108
DA+RAL +N + +K + + + R
Sbjct: 101 DASRALAEMNSKMVGSKPLYVALAQR 126
>gi|126649325|ref|XP_001388334.1| poly(a)-binding protein fabm [Cryptosporidium parvum Iowa II]
gi|32398879|emb|CAD98589.1| putative poly(a)-binding protein fabm, possible [Cryptosporidium
parvum]
gi|126117428|gb|EAZ51528.1| poly(a)-binding protein fabm, putative [Cryptosporidium parvum Iowa
II]
Length = 746
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 134/243 (55%), Positives = 178/243 (73%), Gaps = 3/243 (1%)
Query: 28 LTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARA 87
++ SLYVGDLD +VT++ LY++F+ V V SVR+CRD TRRSLGY YVNY + ADA RA
Sbjct: 10 VSASLYVGDLDADVTETMLYEIFNSVAVVSSVRICRDALTRRSLGYAYVNYNSVADAERA 69
Query: 88 LDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSC 147
LD LNFT + + RIM+ RDP+ R++ GN+F+KNLDKSID+K L DTFS FGNI+SC
Sbjct: 70 LDTLNFTCIRGRPCRIMWCLRDPASRRNNDGNVFVKNLDKSIDNKTLFDTFSLFGNIMSC 129
Query: 148 KIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK 207
KIATD G+S G+GF+ FE+ +SA+ AI +LNG ++ D+ ++VG F +K ER + KT
Sbjct: 130 KIATDVEGKSLGYGFIHFEHADSAKEAISRLNGAVLGDRPIYVGKFQKKAERFSEKDKT- 188
Query: 208 FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVE 267
F NV+VK++ +S T++ L KIFG YG I+S V+ D G+ FGFVNFEN D A AV
Sbjct: 189 FTNVYVKHIPKSWTEDLLYKIFGVYGKISSLVLQSDSKGRP--FGFVNFENPDSAKAAVA 246
Query: 268 ALN 270
AL+
Sbjct: 247 ALH 249
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 148/516 (28%), Positives = 251/516 (48%), Gaps = 64/516 (12%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
+++V +LD ++ + L+D FS G ++S ++ D+ + SLGYG++++ + A A+
Sbjct: 101 NVFVKNLDKSIDNKTLFDTFSLFGNIMSCKIATDVEGK-SLGYGFIHFEHADSAKEAISR 159
Query: 91 LNFTPLNNKSIRI--------MYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
LN L ++ I + +S +D + N+++K++ KS L+ F +G
Sbjct: 160 LNGAVLGDRPIYVGKFQKKAERFSEKDKTFT-----NVYVKHIPKSWTEDLLYKIFGVYG 214
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 202
I S + +D G + FGFV FEN +SA+ A+ L+ L+ V E ++
Sbjct: 215 KISSLVLQSDSKG--RPFGFVNFENPDSAKAAVAALHNALVTPVGV---------ELDST 263
Query: 203 AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDA 262
A +T +N + + S+ E G ++ G+ G N E+A +
Sbjct: 264 A-ETPVDNEAGADSETSSKQES--------GEASNKKQTASGEASKDSSGTSNEESAQNE 314
Query: 263 AKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDS 322
+ + YV +AQKK+ER+ LK Q E A+KE+ ++QG+NLY+KNL DS
Sbjct: 315 DGSADKNVSADVQPNRLYVSRAQKKNERQVVLKSQHE-AVKESHQRYQGVNLYVKNLADS 373
Query: 323 IDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPL 382
I++E L+ +F FGT++S + D SG+S+G GFV+F +P+EA++A+ EM+ K++ KPL
Sbjct: 374 INEEDLRSMFEPFGTVSSVSIKTDESGVSRGFGFVSFLSPDEATKAITEMHLKLVRGKPL 433
Query: 383 YVAVAQRKEERRARLQAQF------------------SQMRPVAMGPSVPPRMPMYPPGP 424
YV + +RKE+R RLQ + + M VPP+M P P
Sbjct: 434 YVGLHERKEQRALRLQQRIRGGAVPPVLRPGAIPPGPPGVHGAPMQFGVPPQMYFIPGNP 493
Query: 425 SGLGQQFLYGQAPPAIIPPQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIP 484
+ +G+ A++ P + +A P N P+ G VP M G P
Sbjct: 494 NVAATAMPHGR---AMVTGGFPNQ-NAMNNPWRPNPTRMPYTAGG-----VPPQMTGG-P 543
Query: 485 RRDASVGQPMPITALS-TALANASPEQQRTLLGESL 519
+ A G + +S ANA+ Q + G ++
Sbjct: 544 QMTAYNGNVIQQNGVSPNGAANATGSVQNGVTGNAV 579
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 136/263 (51%), Gaps = 20/263 (7%)
Query: 117 TGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAI 175
+ ++++ +LD + L++ F+S + S +I D + +S G+ +V + + A+ A+
Sbjct: 11 SASLYVGDLDADVTETMLYEIFNSVAVVSSVRICRDALTRRSLGYAYVNYNSVADAERAL 70
Query: 176 DKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTI 235
D LN I + + LR + + + NVFVKNLD+S ++ L F +G I
Sbjct: 71 DTLNFTCIRGRPCRIMWCLR----DPASRRNNDGNVFVKNLDKSIDNKTLFDTFSLFGNI 126
Query: 236 TSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELK 295
S + D +GKS +GF++FE+AD A +A+ LNG DR YVGK QKK+ER E
Sbjct: 127 MSCKIATDVEGKSLGYGFIHFEHADSAKEAISRLNGAVLGDRPIYVGKFQKKAERFSEKD 186
Query: 296 GQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSG 355
F N+Y+K++ S ++ L ++F +G I+S + D G + G
Sbjct: 187 KTF-------------TNVYVKHIPKSWTEDLLYKIFGVYGKISSLVLQSDSKG--RPFG 231
Query: 356 FVAFSTPEEASRALAEMNGKMIV 378
FV F P+ A A+A ++ ++
Sbjct: 232 FVNFENPDSAKAAVAALHNALVT 254
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 42/63 (66%)
Query: 511 QRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSV 570
Q+ LLGE L+P++ Q + + A K+TGM+LEMD E+L LL S +K KV EAM VL
Sbjct: 681 QKQLLGERLFPIIAQFQPELAGKITGMMLEMDNNELLELLSSDIEIKNKVDEAMVVLERA 740
Query: 571 AQQ 573
QQ
Sbjct: 741 QQQ 743
>gi|115468728|ref|NP_001057963.1| Os06g0589700 [Oryza sativa Japonica Group]
gi|113596003|dbj|BAF19877.1| Os06g0589700 [Oryza sativa Japonica Group]
Length = 399
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 167/378 (44%), Positives = 217/378 (57%), Gaps = 61/378 (16%)
Query: 241 MRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQ 300
MRD +G S+CFGFVNFE ++ A AV+ LNGK D YV +AQKKSER+ ELK +FE
Sbjct: 1 MRDANGLSRCFGFVNFEKSECARNAVKNLNGKSIGDMVLYVARAQKKSERQAELKAKFEH 60
Query: 301 AMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFS 360
+ +K Q +NLY+KNL D I+DE L++LF FG + SCKVM D G SKG GFV+F+
Sbjct: 61 DKNQKFEKLQTVNLYLKNLDDDINDEHLRKLFECFGEVASCKVMLDSHGRSKGCGFVSFA 120
Query: 361 TPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVA-MGPSVPPRMPM 419
T E+A+ A+ +MNGKM+ KPLYVAVAQRKEER+A L A F+++R +A M P++
Sbjct: 121 TVEDANNAILKMNGKMVGKKPLYVAVAQRKEERKAFLAAHFARVRALATMAPTL------ 174
Query: 420 YPPGPSGLGQQFLYGQA---------------PPAIIPPQM--------------PPRGH 450
GP+ QF +G P +P M PP G
Sbjct: 175 ---GPNIAPHQFNFGHGVPALFPPPPPAGFGFQPNFVPNMMMPYNMQRQPGQRSGPPHGG 231
Query: 451 AYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIP------RRDASVGQPM---------- 494
R+ L Q F + G G P R +S QPM
Sbjct: 232 MPRH-LHNPHQMFHQNANQGFRHMPNRRNGVANPAMLHQHHRFSSPMQPMQQAVKHVVPV 290
Query: 495 -----PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHL 549
P L T+LA+A+PEQQR +LG+ L+PLVEQL + A KVTGMLLE+D+TEVL+L
Sbjct: 291 GELQAPSNNLQTSLASANPEQQREILGDMLFPLVEQLVNEKAYKVTGMLLELDKTEVLNL 350
Query: 550 LESPEALKAKVAEAMEVL 567
+ESP+ L+ KVAEAM+VL
Sbjct: 351 VESPDTLRDKVAEAMKVL 368
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 87/160 (54%), Gaps = 14/160 (8%)
Query: 152 DGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFN-- 209
D +G S+ FGFV FE E A+NA+ LNG I D ++V +K ER+ +K KF
Sbjct: 3 DANGLSRCFGFVNFEKSECARNAVKNLNGKSIGDMVLYVARAQKKSERQA-ELKAKFEHD 61
Query: 210 -----------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFEN 258
N+++KNLD+ DE L+K+F +G + S VM D G+SK GFV+F
Sbjct: 62 KNQKFEKLQTVNLYLKNLDDDINDEHLRKLFECFGEVASCKVMLDSHGRSKGCGFVSFAT 121
Query: 259 ADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQF 298
+DA A+ +NGK + YV AQ+K ER+ L F
Sbjct: 122 VEDANNAILKMNGKMVGKKPLYVAVAQRKEERKAFLAAHF 161
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 73/148 (49%), Gaps = 16/148 (10%)
Query: 70 SLGYGYVNYANPADAARALDVLNFTPLNN---------------KSIRIMYSH-RDPSIR 113
S +G+VN+ A A+ LN + + ++ + H ++
Sbjct: 8 SRCFGFVNFEKSECARNAVKNLNGKSIGDMVLYVARAQKKSERQAELKAKFEHDKNQKFE 67
Query: 114 KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQN 173
K T N+++KNLD I+ + L F FG + SCK+ D G+SKG GFV F E A N
Sbjct: 68 KLQTVNLYLKNLDDDINDEHLRKLFECFGEVASCKVMLDSHGRSKGCGFVSFATVEDANN 127
Query: 174 AIDKLNGMLINDKQVFVGHFLRKQERET 201
AI K+NG ++ K ++V RK+ER+
Sbjct: 128 AILKMNGKMVGKKPLYVAVAQRKEERKA 155
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
T +LY+ +LD ++ D L LF G+V S +V D S RS G G+V++A DA A+
Sbjct: 71 TVNLYLKNLDDDINDEHLRKLFECFGEVASCKVMLD-SHGRSKGCGFVSFATVEDANNAI 129
Query: 89 DVLNFTPLNNKSIRIMYSHR 108
+N + K + + + R
Sbjct: 130 LKMNGKMVGKKPLYVAVAQR 149
>gi|67623121|ref|XP_667843.1| poly(a)-binding protein fabm [Cryptosporidium hominis TU502]
gi|54659004|gb|EAL37605.1| poly(a)-binding protein fabm [Cryptosporidium hominis]
Length = 746
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 134/243 (55%), Positives = 178/243 (73%), Gaps = 3/243 (1%)
Query: 28 LTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARA 87
++ SLYVGDLD +VT++ LY++F+ V V SVR+CRD TRRSLGY YVNY + ADA RA
Sbjct: 10 VSASLYVGDLDADVTETMLYEIFNSVAVVSSVRICRDALTRRSLGYAYVNYNSVADAERA 69
Query: 88 LDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSC 147
LD LNFT + + RIM+ RDP+ R++ GN+F+KNLDKSID+K L DTFS FGNI+SC
Sbjct: 70 LDTLNFTCIRGRPCRIMWCLRDPASRRNNDGNVFVKNLDKSIDNKTLFDTFSLFGNIMSC 129
Query: 148 KIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK 207
KIATD G+S G+GF+ FE+ +SA+ AI +LNG ++ D+ ++VG F +K ER + KT
Sbjct: 130 KIATDVEGKSLGYGFIHFEHADSAKEAISRLNGAVLGDRPIYVGKFQKKAERFSEKDKT- 188
Query: 208 FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVE 267
F NV+VK++ +S T++ L KIFG YG I+S V+ D G+ FGFVNFEN D A AV
Sbjct: 189 FTNVYVKHIPKSWTEDLLYKIFGVYGKISSLVLQSDSKGRP--FGFVNFENPDSAKAAVA 246
Query: 268 ALN 270
AL+
Sbjct: 247 ALH 249
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 150/516 (29%), Positives = 249/516 (48%), Gaps = 64/516 (12%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
+++V +LD ++ + L+D FS G ++S ++ D+ + SLGYG++++ + A A+
Sbjct: 101 NVFVKNLDKSIDNKTLFDTFSLFGNIMSCKIATDVEGK-SLGYGFIHFEHADSAKEAISR 159
Query: 91 LNFTPLNNKSIRI--------MYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
LN L ++ I + +S +D + N+++K++ KS L+ F +G
Sbjct: 160 LNGAVLGDRPIYVGKFQKKAERFSEKDKTFT-----NVYVKHIPKSWTEDLLYKIFGVYG 214
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 202
I S + +D G + FGFV FEN +SA+ A+ L+ L+ V E ++
Sbjct: 215 KISSLVLQSDSKG--RPFGFVNFENPDSAKAAVAALHNALVTPVGV---------ELDST 263
Query: 203 AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDA 262
A + N D T+ + S+ +D G S N E A +
Sbjct: 264 AETSADNEA---GADSETSSKQESGEASNKKQTASSETSKDSSGTS------NEEFAQNE 314
Query: 263 AKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDS 322
+ + YV +AQKK+ER+ LK Q E A+KE+ ++QG+NLY+KNL DS
Sbjct: 315 DGSADKNVSADVQPNRLYVSRAQKKNERQVVLKSQHE-AVKESHQRYQGVNLYVKNLADS 373
Query: 323 IDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPL 382
I++E L+ +F FGT++S + D SG+S+G GFV+F +P+EA++A+ EM+ K++ KPL
Sbjct: 374 INEEDLRSMFEPFGTVSSVSIKTDESGVSRGFGFVSFLSPDEATKAITEMHLKLVRGKPL 433
Query: 383 YVAVAQRKEERRARLQAQF--SQMRPV----------------AMGPSVPPRMPMYPPGP 424
YV + +RKE+R RLQ + + PV M VPP+M P P
Sbjct: 434 YVGLHERKEQRALRLQQRIRGGAVPPVLRPGAIPPGPPGVHGAPMQFGVPPQMYFIPGNP 493
Query: 425 SGLGQQFLYGQAPPAIIPPQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIP 484
+ +G+ A++ P + +A P N P+ G VP M G P
Sbjct: 494 NVAATAMPHGR---AMVTGGFPNQ-NAMNNPWRPNPTRMPYTAGG-----VPPQMTGG-P 543
Query: 485 RRDASVGQPMPITALS-TALANASPEQQRTLLGESL 519
+ A G + +S ANA+ Q + G ++
Sbjct: 544 QMTAYNGNVIQQNGVSPNGAANATGSVQNGVTGNAV 579
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 136/263 (51%), Gaps = 20/263 (7%)
Query: 117 TGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAI 175
+ ++++ +LD + L++ F+S + S +I D + +S G+ +V + + A+ A+
Sbjct: 11 SASLYVGDLDADVTETMLYEIFNSVAVVSSVRICRDALTRRSLGYAYVNYNSVADAERAL 70
Query: 176 DKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTI 235
D LN I + + LR + + + NVFVKNLD+S ++ L F +G I
Sbjct: 71 DTLNFTCIRGRPCRIMWCLR----DPASRRNNDGNVFVKNLDKSIDNKTLFDTFSLFGNI 126
Query: 236 TSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELK 295
S + D +GKS +GF++FE+AD A +A+ LNG DR YVGK QKK+ER E
Sbjct: 127 MSCKIATDVEGKSLGYGFIHFEHADSAKEAISRLNGAVLGDRPIYVGKFQKKAERFSEKD 186
Query: 296 GQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSG 355
F N+Y+K++ S ++ L ++F +G I+S + D G + G
Sbjct: 187 KTF-------------TNVYVKHIPKSWTEDLLYKIFGVYGKISSLVLQSDSKG--RPFG 231
Query: 356 FVAFSTPEEASRALAEMNGKMIV 378
FV F P+ A A+A ++ ++
Sbjct: 232 FVNFENPDSAKAAVAALHNALVT 254
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 42/63 (66%)
Query: 511 QRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSV 570
Q+ LLGE L+P++ Q + + A K+TGM+LEMD E+L LL S +K KV EAM VL
Sbjct: 681 QKQLLGERLFPIIAQFQPELAGKITGMMLEMDNNELLELLSSDIEIKNKVDEAMVVLERA 740
Query: 571 AQQ 573
QQ
Sbjct: 741 QQQ 743
>gi|281204064|gb|EFA78260.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 617
Score = 268 bits (684), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 177/483 (36%), Positives = 254/483 (52%), Gaps = 75/483 (15%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQ--VLSVRVCRDLSTRRSLGYGYVNYANPADAARA 87
TSLYVGDL +V + L +LFS+VG+ V S+ VCRD T RSLGY YVN+ N DA RA
Sbjct: 138 TSLYVGDLAPDVNEIMLSELFSKVGRSAVASIHVCRDSITFRSLGYAYVNFFNSIDAERA 197
Query: 88 LDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSC 147
LD LN++ + + RIM+S RDP+ RKS GNIF+KNLDK +D+ L DTFS FGNILSC
Sbjct: 198 LDTLNYSQIMGRPCRIMWSLRDPTKRKSNVGNIFVKNLDKQVDNAMLFDTFSKFGNILSC 257
Query: 148 KIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK 207
KI + G SKG+G+V FE +ES+ AI +NG ++ K + V F+ K ER + K
Sbjct: 258 KIEYE-KGVSKGYGYVHFETQESSDRAIQGVNGTMLCGKPITVEQFVSKVERFKEKNEHK 316
Query: 208 FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVE 267
+F+KN+DE T E L+ +G I S ++ D +GKSK GFV F++ +DA + ++
Sbjct: 317 ---LFIKNIDELATVEQLQAELSRFGEIESCIIRLDNNGKSKGLGFVEFKSVEDAQRLMD 373
Query: 268 ALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQ----------------- 310
+ + + + + K ER E + +Q +
Sbjct: 374 NPEPIQILSKPITIDRIKNKMERNIEHRQIKQQQANGNPNNNNNVVNNSTAPTVAATTTT 433
Query: 311 ------------------------GLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRD 346
L L+I N+ +SID E ++E F++ GTI K++++
Sbjct: 434 TTTTVDSNGNPTNSSNNNNSVAPTNLTLFIHNIDESIDKEVIREEFAKHGTILGIKIVQE 493
Query: 347 PSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRA-RLQAQFSQMR 405
+G ++G GF+++ST EEA+ A+ +MNG ++ SKPL V+ + RK ++R +LQ+ S
Sbjct: 494 -NGKNRGFGFLSYSTQEEANIAIEKMNGFILGSKPLSVSFSNRKYKKRMQQLQSNGSN-- 550
Query: 406 PVAMGPSVPPRMPMYP--PGPSGL-----------------GQQFLYGQAPPAIIPPQMP 446
PS P P P P P GQ F Q PP QMP
Sbjct: 551 ----DPSQPQPQPHIPLQPMPYYFRNPYHHHHPHPHSPHHQGQVFHPHQQPPYYT-HQMP 605
Query: 447 PRG 449
P G
Sbjct: 606 PNG 608
>gi|402590718|gb|EJW84648.1| polyadenylate-binding protein 4, partial [Wuchereria bancrofti]
Length = 519
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 139/285 (48%), Positives = 193/285 (67%), Gaps = 7/285 (2%)
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER--ETVAIKT 206
+A D SKG+GFV FE +ESAQ AI+K+NGML+ K+V+VG F + R E
Sbjct: 1 VANDEESNSKGYGFVHFETEESAQKAIEKVNGMLLEGKKVYVGKFQPRTARLREMGETAR 60
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
+F NV++KN + E L+K+F ++G ITSA VM D DGKSK FGFV FEN +DA KAV
Sbjct: 61 RFTNVYIKNFADELDKEALEKLFSKFGKITSAAVMVDADGKSKGFGFVAFENPEDAEKAV 120
Query: 267 EALNGKKF--DDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSID 324
++ + +R+ YV +AQKK+ER ELK ++EQ E + ++QG+NLY+KNL D+++
Sbjct: 121 TEMHEYELPGTERKLYVCRAQKKNERSAELKRRYEQQKVERMQRYQGVNLYVKNLDDTVN 180
Query: 325 DEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYV 384
D+ LK+ F +G ITS KVM D +G SKG GFV F P+EA++A+ EMNGKM+ +KPLYV
Sbjct: 181 DDILKQNFEAYGKITSAKVMCDDNGRSKGFGFVCFEKPDEATKAVTEMNGKMMCTKPLYV 240
Query: 385 AVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMP--MYPPGPSGL 427
A+AQRKE+R+A+L +Q+ Q R ++ MP +Y PG G
Sbjct: 241 ALAQRKEDRKAQLASQYMQ-RLASIRMHNAGSMPGTVYTPGTGGF 284
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 91/254 (35%), Positives = 142/254 (55%), Gaps = 22/254 (8%)
Query: 70 SLGYGYVNYANPADAARALDVLNFTPLNNKSIRI-MYSHRDPSIRKSGT-----GNIFIK 123
S GYG+V++ A +A++ +N L K + + + R +R+ G N++IK
Sbjct: 9 SKGYGFVHFETEESAQKAIEKVNGMLLEGKKVYVGKFQPRTARLREMGETARRFTNVYIK 68
Query: 124 NLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLI 183
N +D +AL FS FG I S + D G+SKGFGFV FEN E A+ A+ +++ +
Sbjct: 69 NFADELDKEALEKLFSKFGKITSAAVMVDADGKSKGFGFVAFENPEDAEKAVTEMHEYEL 128
Query: 184 --NDKQVFVGHFLRKQERETVAIKTKFN-------------NVFVKNLDESTTDEDLKKI 228
+++++V +K ER + +K ++ N++VKNLD++ D+ LK+
Sbjct: 129 PGTERKLYVCRAQKKNER-SAELKRRYEQQKVERMQRYQGVNLYVKNLDDTVNDDILKQN 187
Query: 229 FGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKS 288
F YG ITSA VM D +G+SK FGFV FE D+A KAV +NGK + YV AQ+K
Sbjct: 188 FEAYGKITSAKVMCDDNGRSKGFGFVCFEKPDEATKAVTEMNGKMMCTKPLYVALAQRKE 247
Query: 289 EREQELKGQFEQAM 302
+R+ +L Q+ Q +
Sbjct: 248 DRKAQLASQYMQRL 261
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 98/190 (51%), Gaps = 21/190 (11%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
T++Y+ + + L LFS+ G++ S V D + +S G+G+V + NP DA +A+
Sbjct: 63 TNVYIKNFADELDKEALEKLFSKFGKITSAAVMVD-ADGKSKGFGFVAFENPEDAEKAVT 121
Query: 90 VLNFTPL---------------NNKSIRIMYSHRDPSI----RKSGTGNIFIKNLDKSID 130
++ L N +S + + + R G N+++KNLD +++
Sbjct: 122 EMHEYELPGTERKLYVCRAQKKNERSAELKRRYEQQKVERMQRYQGV-NLYVKNLDDTVN 180
Query: 131 HKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFV 190
L F ++G I S K+ D +G+SKGFGFV FE + A A+ ++NG ++ K ++V
Sbjct: 181 DDILKQNFEAYGKITSAKVMCDDNGRSKGFGFVCFEKPDEATKAVTEMNGKMMCTKPLYV 240
Query: 191 GHFLRKQERE 200
RK++R+
Sbjct: 241 ALAQRKEDRK 250
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 55/76 (72%), Gaps = 3/76 (3%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDA-AAKVTGMLLEMDQTEVLHLLESP 553
P+TA LA A P++Q+ +LGE +YPL+E++ + K+TGM+LEMD +E+L +LE+
Sbjct: 440 PLTA--HMLAQALPQEQKQMLGERIYPLIERIYQGPDVGKITGMMLEMDNSELLMMLENE 497
Query: 554 EALKAKVAEAMEVLRS 569
E L++KV+EA VL S
Sbjct: 498 ELLQSKVSEAASVLAS 513
>gi|328876647|gb|EGG25010.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 748
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 151/392 (38%), Positives = 224/392 (57%), Gaps = 36/392 (9%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQ--VLSVRVCRDLSTRRSLGYGYVNYANPADAARA 87
TSLYVGDL V + L +LFS+VG+ V S+ VCRD +T RSLGY YVN+ N DA RA
Sbjct: 130 TSLYVGDLSQEVNELILAELFSKVGRTAVASIHVCRDSATLRSLGYAYVNFYNSVDAERA 189
Query: 88 LDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSC 147
LD LN++ + + RIM+SHRDP+ RKS GNIF+KNL+K++D+ L DTFS++GNILSC
Sbjct: 190 LDTLNYSLILGRPCRIMWSHRDPTKRKSNVGNIFVKNLEKNVDNALLFDTFSTYGNILSC 249
Query: 148 KIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK 207
KI + G SKG+G+V FEN+ES++ AI K+NG ++ K + V F+ K ER K
Sbjct: 250 KIEYE-KGISKGYGYVHFENQESSEQAILKVNGTILLGKPIIVEPFVSKVER--FKEKKN 306
Query: 208 FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVE 267
N +F+KN+DE+ T E L++ +G I S + D GK K FV F+ ++DA +E
Sbjct: 307 ENKLFIKNIDENVTSEMLQQELSRFGEIESCNIRTDPTGKPKGLAFVEFKTSEDAQALLE 366
Query: 268 ALNGKKFDDREWYVGKAQKKSEREQE-------------------------LKGQFEQAM 302
+ ++ + + K ER E +Q
Sbjct: 367 STEAITILSKQITFDRIKNKVERSIEKNQKLINELNNNNNNHNNNNINHHINSSSLQQNG 426
Query: 303 KETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTP 362
+ + Q L L+I N+ +D E ++E F++ G I K+ S+G F+ +ST
Sbjct: 427 STSQQQQQNLTLFINNIDMEVDKEIIREEFAKHGNILGIKIK------SRGFAFLTYSTQ 480
Query: 363 EEASRALAEMNGKMIVSKPLYVAVAQRKEERR 394
EEA+ A+ +MNG + +K L V+++ ++E+R
Sbjct: 481 EEAAVAIEKMNGYVFGTKALVVSLSNSRKEKR 512
Score = 45.4 bits (106), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Query: 309 FQGLNLYIKNLGDSIDDEKLKELFSEFG--TITSCKVMRDPSGI-SKGSGFVAFSTPEEA 365
Q +LY+ +L +++ L ELFS+ G + S V RD + + S G +V F +A
Sbjct: 127 LQFTSLYVGDLSQEVNELILAELFSKVGRTAVASIHVCRDSATLRSLGYAYVNFYNSVDA 186
Query: 366 SRALAEMNGKMIVSKPLYVAVAQRKEERR 394
RAL +N +I+ +P + + R +R
Sbjct: 187 ERALDTLNYSLILGRPCRIMWSHRDPTKR 215
>gi|294877113|ref|XP_002767904.1| protein HSH49, putative [Perkinsus marinus ATCC 50983]
gi|239869872|gb|EER00622.1| protein HSH49, putative [Perkinsus marinus ATCC 50983]
Length = 289
Score = 258 bits (659), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 127/258 (49%), Positives = 179/258 (69%), Gaps = 5/258 (1%)
Query: 15 PNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYG 74
P G QF SLY GDL +V ++ LY++F+ +G V S+RVCRD TR+SLGY
Sbjct: 36 PAPTVGGVPTQQF--ASLYAGDLAPDVNEAVLYEVFNGIGPVASIRVCRDSVTRKSLGYA 93
Query: 75 YVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKAL 134
Y+N+ N ADA RALD LN++P+N + R+M+SHRDP++R+SG GN+++KNLD++ID+KAL
Sbjct: 94 YINFHNVADAERALDTLNYSPINGRPCRLMWSHRDPALRRSGAGNVYVKNLDRNIDNKAL 153
Query: 135 HDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFL 194
+DTFS FGNILSCK+A G+S+GFGFV FE+ ESA+ AI KLNGM I +K V+V F
Sbjct: 154 YDTFSLFGNILSCKVALTPDGKSRGFGFVHFESDESAEAAIAKLNGMQIGEKTVYVAQFK 213
Query: 195 RKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFV 254
+ +R + K F NV++K++ S T+E +++ FG +G ITS + D G+ F FV
Sbjct: 214 KTADRSDGSPK-NFTNVYIKHIPPSWTEEKIREEFGAFGEITSFAMQTDPKGRR--FAFV 270
Query: 255 NFENADDAAKAVEALNGK 272
NF + A AVE ++G+
Sbjct: 271 NFAEFEQARAAVEDMDGE 288
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 131/258 (50%), Gaps = 20/258 (7%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDK 177
+++ +L ++ L++ F+ G + S ++ D + +S G+ ++ F N A+ A+D
Sbjct: 50 SLYAGDLAPDVNEAVLYEVFNGIGPVASIRVCRDSVTRKSLGYAYINFHNVADAERALDT 109
Query: 178 LNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITS 237
LN IN + L R+ ++ NV+VKNLD + ++ L F +G I S
Sbjct: 110 LNYSPINGRPCR----LMWSHRDPALRRSGAGNVYVKNLDRNIDNKALYDTFSLFGNILS 165
Query: 238 AVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQ 297
V DGKS+ FGFV+FE+ + A A+ LNG + ++ YV + +K ++R
Sbjct: 166 CKVALTPDGKSRGFGFVHFESDESAEAAIAKLNGMQIGEKTVYVAQFKKTADRSDGSPKN 225
Query: 298 FEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFV 357
F N+YIK++ S +EK++E F FG ITS + DP G + FV
Sbjct: 226 F-------------TNVYIKHIPPSWTEEKIREEFGAFGEITSFAMQTDPKG--RRFAFV 270
Query: 358 AFSTPEEASRALAEMNGK 375
F+ E+A A+ +M+G+
Sbjct: 271 NFAEFEQARAAVEDMDGE 288
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 99/207 (47%), Gaps = 17/207 (8%)
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENADDAAKA 265
+F +++ +L + L ++F G + S V RD KS + ++NF N DA +A
Sbjct: 47 QFASLYAGDLAPDVNEAVLYEVFNGIGPVASIRVCRDSVTRKSLGYAYINFHNVADAERA 106
Query: 266 VEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDD 325
++ LN + R + + + + G N+Y+KNL +ID+
Sbjct: 107 LDTLNYSPINGRPCRLMWSHRDPALRRSGAG----------------NVYVKNLDRNIDN 150
Query: 326 EKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVA 385
+ L + FS FG I SCKV P G S+G GFV F + E A A+A++NG I K +YVA
Sbjct: 151 KALYDTFSLFGNILSCKVALTPDGKSRGFGFVHFESDESAEAAIAKLNGMQIGEKTVYVA 210
Query: 386 VAQRKEERRARLQAQFSQMRPVAMGPS 412
++ +R F+ + + PS
Sbjct: 211 QFKKTADRSDGSPKNFTNVYIKHIPPS 237
>gi|62751624|ref|NP_001015753.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Xenopus
(Silurana) tropicalis]
gi|58476781|gb|AAH89689.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Xenopus
(Silurana) tropicalis]
Length = 217
Score = 258 bits (658), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 125/206 (60%), Positives = 158/206 (76%), Gaps = 3/206 (1%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ PADA RALD
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+FGNILSCK+
Sbjct: 72 MNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVV 131
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET-VAIKTK-F 208
D +G SKG+ FV FE +++A AI+K+NGML+ND++VFVG F ++ERE + K K F
Sbjct: 132 CDENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKCRREREAELGAKAKEF 190
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGT 234
NV++KN E DE LK+ F +YG
Sbjct: 191 TNVYIKNFGEDMDDERLKETFSKYGC 216
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 124/221 (56%), Gaps = 16/221 (7%)
Query: 118 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAID 176
++++ +L + L++ FS G +LS ++ D + +S G+ +V F+ A+ A+D
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 177 KLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTIT 236
+N +I K + + +R+ K+ NVF+KNLD+S ++ L F +G I
Sbjct: 71 TMNFDVIKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNIL 126
Query: 237 SAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKG 296
S V+ D +G SK + FV+FE D A +A+E +NG +DR+ +VG+ + + ERE EL
Sbjct: 127 SCKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKCRREREAELGA 185
Query: 297 QFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGT 337
+ ++ N+YIKN G+ +DDE+LKE FS++G
Sbjct: 186 KAKEFT----------NVYIKNFGEDMDDERLKETFSKYGC 216
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 97/192 (50%), Gaps = 18/192 (9%)
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENADDAAKAVEA 268
+++V +L T+ L + F G + S V RD +S + +VNF+ DA +A++
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
+N + + +Q+ + G N++IKNL SID++ L
Sbjct: 72 MNFDVIKGKPIRIMWSQRDPSLRKSGVG----------------NVFIKNLDKSIDNKAL 115
Query: 329 KELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
+ FS FG I SCKV+ D +G SKG FV F T + A RA+ +MNG ++ + ++V +
Sbjct: 116 YDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFK 174
Query: 389 RKEERRARLQAQ 400
+ ER A L A+
Sbjct: 175 CRREREAELGAK 186
>gi|297791101|ref|XP_002863435.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297309270|gb|EFH39694.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 341
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 153/276 (55%), Positives = 184/276 (66%), Gaps = 26/276 (9%)
Query: 307 DKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEAS 366
++ Q L IK + + D+ + L E T T+ + + +S+GSGFVAFSTPEEAS
Sbjct: 67 NQIQALVRVIK-VARTYRDDNVPSLIEEVITTTTHRSL----SLSRGSGFVAFSTPEEAS 121
Query: 367 RALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSG 426
RA+ EMNGKMIV+KPLYVA+AQRKE+ +ARLQ MRPV M P+V PRM MYPPG
Sbjct: 122 RAITEMNGKMIVTKPLYVALAQRKEDCKARLQ-----MRPVNMPPAVGPRMQMYPPGGPP 176
Query: 427 LGQQFLYGQAPPAIIPPQMPPRGHAYR-------YPLGRNMQDFPFDM------GAGSML 473
+GQQ YGQ PPA+IPPQ G Y+ P G M +F M
Sbjct: 177 MGQQLFYGQGPPAMIPPQ---PGFGYQQQLVPGMRPGGSPMPNFFMPMMQQGQQQQQQQQ 233
Query: 474 PVPVDMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAK 533
G G+ RD+ Q +PI AL+T LANA+PEQQRT+LGE+LYPLVEQLE ++AAK
Sbjct: 234 QQQQQYGGGVHHRDSPASQSVPIGALATQLANAAPEQQRTMLGENLYPLVEQLEPESAAK 293
Query: 534 VTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRS 569
VTGMLLEMDQTEVLHLLESPEALKAKV EAM+VLRS
Sbjct: 294 VTGMLLEMDQTEVLHLLESPEALKAKVTEAMDVLRS 329
>gi|401429856|ref|XP_003879410.1| putative poly(a) binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322495660|emb|CBZ30966.1| putative poly(a) binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 594
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 153/401 (38%), Positives = 235/401 (58%), Gaps = 19/401 (4%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
S++VG LD ++ + +LYD F ++G V SVRVC D +T++SLGYGYVN+ +PADA +ALD
Sbjct: 9 SIWVGGLDPDLQEQKLYDYFVRIGPVTSVRVCVDSATQKSLGYGYVNFQDPADAEKALDQ 68
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+ L ++ +RI RDPS R+SG NI +K L KS+D AL + FS FG + + +A
Sbjct: 69 AG-SKLGSRYLRIAKIQRDPSKRRSGVNNILVKKLPKSVDTYALKEMFSKFGRLTAIGLA 127
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNN 210
D G+S+G+ + FE +ESA +A+ +++GM ++ + + V + + E + +F N
Sbjct: 128 CDEKGESRGYARISFEREESAVDAVREMDGMEMDGQAIVVERYQAQHRDELL---KQFTN 184
Query: 211 VFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKC-FGFVNFENADDAAKAVEAL 269
++VKNLD + TDE L+ F +YG ++SA V G +S+ G+V F+ +DAA+AVE L
Sbjct: 185 LYVKNLDPAVTDEKLRAFFAKYGEVSSAKVRDLGAVQSEAGLGYVAFQKHEDAARAVEEL 244
Query: 270 NGKKFDDREWYVGKA------QKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSI 323
NGK E + KA + RE+ + + Q + + NLY+K D++
Sbjct: 245 NGK-----ECEIAKAGSPLDVSRFRSREERQRDRERQRRERAQQHSKYPNLYVKGFDDTV 299
Query: 324 DDEKLKELFSEFGTITSCKVMRDP-SGISKGSGFVAFSTPEEASRALAEMNGKMIVS-KP 381
E+L+ELF +G S VM D +G+S+ GFV+ AS+A+ E+NG +S +P
Sbjct: 300 TSERLEELFQRYGETVSVTVMMDKETGVSRCFGFVSMKDQNAASQAIQELNGSTFLSPRP 359
Query: 382 LYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPP 422
L+V A RK+ RR L+ + Q R V P P M PP
Sbjct: 360 LFVTYALRKDARRQNLEERSKQFR-VRQNPMGGPGMGAMPP 399
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 95/190 (50%), Gaps = 21/190 (11%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRS-LGYGYVNYANPADAARA- 87
T+LYV +LD VTD +L F++ G+V S +V RDL +S G GYV + DAARA
Sbjct: 183 TNLYVKNLDPAVTDEKLRAFFAKYGEVSSAKV-RDLGAVQSEAGLGYVAFQKHEDAARAV 241
Query: 88 ----------------LDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDH 131
LDV F + R+ + + S N+++K D ++
Sbjct: 242 EELNGKECEIAKAGSPLDVSRFRSREERQRDRERQRRERAQQHSKYPNLYVKGFDDTVTS 301
Query: 132 KALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKLNG-MLINDKQVF 189
+ L + F +G +S + D +G S+ FGFV +++ +A AI +LNG ++ + +F
Sbjct: 302 ERLEELFQRYGETVSVTVMMDKETGVSRCFGFVSMKDQNAASQAIQELNGSTFLSPRPLF 361
Query: 190 VGHFLRKQER 199
V + LRK R
Sbjct: 362 VTYALRKDAR 371
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 51/69 (73%)
Query: 499 LSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKA 558
L+ LAN +PEQQ+ +LGE LY + + AAK+TGMLLEMD +E+L++L+SP L +
Sbjct: 520 LAAVLANLNPEQQKNVLGERLYSYIVRSHPSVAAKITGMLLEMDNSEILNMLDSPTMLDS 579
Query: 559 KVAEAMEVL 567
K+AEA +VL
Sbjct: 580 KIAEAQDVL 588
>gi|23197794|gb|AAN15424.1| Strong similarity to poly(A)-binding protein (PABP5) [Arabidopsis
thaliana]
Length = 379
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 169/379 (44%), Positives = 214/379 (56%), Gaps = 90/379 (23%)
Query: 263 AKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDS 322
A AVE +NG D YVG+AQKKSERE+EL+ +FEQ +K QG NLY+KNL DS
Sbjct: 2 AAAVEKMNGISLGDDVLYVGRAQKKSEREEELRRKFEQERINRFEKSQGANLYLKNLDDS 61
Query: 323 IDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPL 382
+DDEKLKE+FSE+G +TS KVM +P G+S+G GFVA+S PEEA RAL+EMNGKMI KPL
Sbjct: 62 VDDEKLKEMFSEYGNVTSSKVMLNPQGMSRGFGFVAYSNPEEALRALSEMNGKMIGRKPL 121
Query: 383 YVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGP-SGL-----------GQQ 430
Y+A+AQRKE+RRA LQA FSQ+R PGP SG Q
Sbjct: 122 YIALAQRKEDRRAHLQALFSQIR---------------APGPMSGFHHPPGGPMPGPPQH 166
Query: 431 FLYGQAPPAIIPPQMPPRGHAYR-------------------YPLGRNMQDFP---FDMG 468
GQ +++P Q P G+ ++ YPL R Q P F G
Sbjct: 167 MYVGQNGASMVPSQ--PIGYGFQPQFMPGMRPGSGPGNFIVPYPLQRQPQTGPRMGFRRG 224
Query: 469 AGSML------------PVP------------VDMGAGIPR----------RDAS--VGQ 492
A ++ P P M + +P+ DAS Q
Sbjct: 225 ATNVQQHIQQQQLMHRNPSPGMRYMNGASNGRNGMDSSVPQGILPPIIPLPIDASSISHQ 284
Query: 493 PMPITALS---TALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHL 549
P+ +S ++LA+ASP + +LGE LYPLVE+ E AKVTGMLLEMDQ E+LHL
Sbjct: 285 KAPLLPISKLTSSLASASPADRTRMLGEQLYPLVERHEPLHVAKVTGMLLEMDQAEILHL 344
Query: 550 LESPEALKAKVAEAMEVLR 568
+ESPEALK+KV+EA++VLR
Sbjct: 345 MESPEALKSKVSEALDVLR 363
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 82/140 (58%), Gaps = 14/140 (10%)
Query: 174 AIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFN-------------NVFVKNLDEST 220
A++K+NG+ + D ++VG +K ERE ++ KF N+++KNLD+S
Sbjct: 4 AVEKMNGISLGDDVLYVGRAQKKSEREE-ELRRKFEQERINRFEKSQGANLYLKNLDDSV 62
Query: 221 TDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWY 280
DE LK++F EYG +TS+ VM + G S+ FGFV + N ++A +A+ +NGK + Y
Sbjct: 63 DDEKLKEMFSEYGNVTSSKVMLNPQGMSRGFGFVAYSNPEEALRALSEMNGKMIGRKPLY 122
Query: 281 VGKAQKKSEREQELKGQFEQ 300
+ AQ+K +R L+ F Q
Sbjct: 123 IALAQRKEDRRAHLQALFSQ 142
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 55/86 (63%)
Query: 114 KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQN 173
KS N+++KNLD S+D + L + FS +GN+ S K+ + G S+GFGFV + N E A
Sbjct: 47 KSQGANLYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLNPQGMSRGFGFVAYSNPEEALR 106
Query: 174 AIDKLNGMLINDKQVFVGHFLRKQER 199
A+ ++NG +I K +++ RK++R
Sbjct: 107 ALSEMNGKMIGRKPLYIALAQRKEDR 132
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
+LY+ +LD +V D +L ++FS+ G V S +V + S G+G+V Y+NP +A RAL
Sbjct: 51 ANLYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLN-PQGMSRGFGFVAYSNPEEALRALS 109
Query: 90 VLNFTPLNNKSIRIMYSHR 108
+N + K + I + R
Sbjct: 110 EMNGKMIGRKPLYIALAQR 128
>gi|146101854|ref|XP_001469222.1| poly(A)-binding protein 2 [Leishmania infantum JPCM5]
gi|398023673|ref|XP_003864998.1| poly(a) binding protein, putative [Leishmania donovani]
gi|134073591|emb|CAM72325.1| poly(A)-binding protein 2 [Leishmania infantum JPCM5]
gi|322503234|emb|CBZ38319.1| poly(a) binding protein, putative [Leishmania donovani]
Length = 585
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 153/401 (38%), Positives = 235/401 (58%), Gaps = 19/401 (4%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
S++VG LD ++ + +LYD F ++G V SVRVC D +T++SLGYGYVN+ +PADA +ALD
Sbjct: 9 SIWVGGLDPDLQEQKLYDYFVRIGPVTSVRVCVDSATQKSLGYGYVNFQDPADAEKALDQ 68
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+ L ++ +RI RDPS R+SG NI +K L KS+D AL + FS FG + + +A
Sbjct: 69 AG-SKLGSRYLRIAKIQRDPSKRRSGVNNILVKKLPKSVDTYALKEMFSKFGRLTAIGLA 127
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNN 210
D G+S+G+ + FE +ESA +A+ +++GM ++ + + V + + E + +F N
Sbjct: 128 CDEKGESRGYARISFEREESAVDAVREMDGMEMDGQAIVVERYQAQHRDELL---KQFTN 184
Query: 211 VFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKC-FGFVNFENADDAAKAVEAL 269
++VKNLD + TDE L+ F +YG ++SA V G +S+ G+V F+ +DAA+AVE L
Sbjct: 185 LYVKNLDPAVTDEKLRAFFAKYGEVSSAKVRDLGAVQSEAGLGYVAFQKHEDAARAVEEL 244
Query: 270 NGKKFDDREWYVGKA------QKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSI 323
NGK E + KA + RE+ + + Q + + NLY+K D++
Sbjct: 245 NGK-----ECEISKAGSPLDVSRFRSREERQRDRERQRRERAQQHSKYPNLYVKGFDDTV 299
Query: 324 DDEKLKELFSEFGTITSCKVMRDP-SGISKGSGFVAFSTPEEASRALAEMNGKMIVS-KP 381
E+L+ELF +G S VM D +G+S+ GFV+ AS+A+ E+NG +S +P
Sbjct: 300 TSERLEELFQRYGETVSVTVMMDKETGVSRCFGFVSMKDQNAASQAIQELNGSTFLSPRP 359
Query: 382 LYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPP 422
L+V A RK+ RR L+ + Q R V P P M PP
Sbjct: 360 LFVTYALRKDARRQNLEERSKQFR-VRQNPMGGPGMGAMPP 399
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 95/190 (50%), Gaps = 21/190 (11%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRS-LGYGYVNYANPADAARA- 87
T+LYV +LD VTD +L F++ G+V S +V RDL +S G GYV + DAARA
Sbjct: 183 TNLYVKNLDPAVTDEKLRAFFAKYGEVSSAKV-RDLGAVQSEAGLGYVAFQKHEDAARAV 241
Query: 88 ----------------LDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDH 131
LDV F + R+ + + S N+++K D ++
Sbjct: 242 EELNGKECEISKAGSPLDVSRFRSREERQRDRERQRRERAQQHSKYPNLYVKGFDDTVTS 301
Query: 132 KALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKLNG-MLINDKQVF 189
+ L + F +G +S + D +G S+ FGFV +++ +A AI +LNG ++ + +F
Sbjct: 302 ERLEELFQRYGETVSVTVMMDKETGVSRCFGFVSMKDQNAASQAIQELNGSTFLSPRPLF 361
Query: 190 VGHFLRKQER 199
V + LRK R
Sbjct: 362 VTYALRKDAR 371
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 51/69 (73%)
Query: 499 LSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKA 558
L+ LAN +PEQQ+ +LGE LY + + AAK+TGMLLEMD +E+L++L+SP L +
Sbjct: 511 LAAVLANLNPEQQKNVLGERLYSYIVRSHPSVAAKITGMLLEMDNSEILNMLDSPTMLDS 570
Query: 559 KVAEAMEVL 567
K+AEA +VL
Sbjct: 571 KIAEAQDVL 579
>gi|389595175|ref|XP_003722810.1| poly(A)-binding protein 2 [Leishmania major strain Friedlin]
gi|323364038|emb|CBZ13044.1| poly(A)-binding protein 2 [Leishmania major strain Friedlin]
Length = 594
Score = 255 bits (651), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 152/401 (37%), Positives = 235/401 (58%), Gaps = 19/401 (4%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
S++VG LD ++ + +LYD F ++G V SVRVC D +T++SLGYGYVN+ +PADA +ALD
Sbjct: 9 SIWVGGLDPDLQEQKLYDYFVRIGPVTSVRVCVDSATQKSLGYGYVNFQDPADAEKALDQ 68
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+ L ++ +RI RDPS R+SG NI +K L KS+D AL + FS FG + + +A
Sbjct: 69 AG-SKLGSRYLRIAKIQRDPSKRRSGVNNILVKKLPKSVDTYALKEMFSKFGRLTAIGLA 127
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNN 210
D G+S+G+ + FE +ESA +A+ +++GM ++ + + V + + E + +F N
Sbjct: 128 CDEKGESRGYARISFEREESAVDAVREMDGMEMDGQAIVVERYQAQHRDELL---KQFTN 184
Query: 211 VFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKC-FGFVNFENADDAAKAVEAL 269
++VKNLD + TDE L+ F +YG ++SA V G +S+ G+V F+ ++AA+AVE L
Sbjct: 185 LYVKNLDPAVTDEKLRAFFAKYGEVSSAKVRDLGAAQSEAGLGYVAFQKHENAARAVEEL 244
Query: 270 NGKKFDDREWYVGKA------QKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSI 323
NGK E + KA + RE+ + + Q + + NLY+K D++
Sbjct: 245 NGK-----ECEIAKAGSPLDVSRFRSREERQRDRERQRRERAQQHSKYPNLYVKGFDDTV 299
Query: 324 DDEKLKELFSEFGTITSCKVMRDP-SGISKGSGFVAFSTPEEASRALAEMNGKMIVS-KP 381
E+L+ELF +G S VM D +G+S+ GFV+ AS+A+ E+NG +S +P
Sbjct: 300 TSERLEELFQRYGETVSVTVMMDKETGVSRCFGFVSMKDQNAASQAIQELNGSTFLSPRP 359
Query: 382 LYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPP 422
L+V A RK+ RR L+ + Q R V P P M PP
Sbjct: 360 LFVTYALRKDARRQNLEERSKQFR-VRQNPMGGPGMGAMPP 399
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 95/190 (50%), Gaps = 21/190 (11%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRS-LGYGYVNYANPADAARA- 87
T+LYV +LD VTD +L F++ G+V S +V RDL +S G GYV + +AARA
Sbjct: 183 TNLYVKNLDPAVTDEKLRAFFAKYGEVSSAKV-RDLGAAQSEAGLGYVAFQKHENAARAV 241
Query: 88 ----------------LDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDH 131
LDV F + R+ + + S N+++K D ++
Sbjct: 242 EELNGKECEIAKAGSPLDVSRFRSREERQRDRERQRRERAQQHSKYPNLYVKGFDDTVTS 301
Query: 132 KALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKLNG-MLINDKQVF 189
+ L + F +G +S + D +G S+ FGFV +++ +A AI +LNG ++ + +F
Sbjct: 302 ERLEELFQRYGETVSVTVMMDKETGVSRCFGFVSMKDQNAASQAIQELNGSTFLSPRPLF 361
Query: 190 VGHFLRKQER 199
V + LRK R
Sbjct: 362 VTYALRKDAR 371
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 50/69 (72%)
Query: 499 LSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKA 558
L+ LAN +PEQQ+ +LGE LY + + AAK+TGMLLEMD E+L++L+SP L +
Sbjct: 520 LAAVLANLNPEQQKNVLGERLYSYIVRSHPSVAAKITGMLLEMDNAEILNMLDSPTMLDS 579
Query: 559 KVAEAMEVL 567
K+AEA +VL
Sbjct: 580 KIAEAQDVL 588
>gi|154345147|ref|XP_001568515.1| putative poly(A)-binding protein 2 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134065852|emb|CAM43630.1| putative poly(A)-binding protein 2 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 579
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 145/384 (37%), Positives = 225/384 (58%), Gaps = 18/384 (4%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
S++VG LD ++ + +LYD F ++G V SVRVC D +T++SLGYGYVN+ +PADA +ALD
Sbjct: 9 SIWVGGLDPDLQEQRLYDYFVRIGPVTSVRVCVDSATQKSLGYGYVNFQDPADAEKALDQ 68
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
T L ++ +RI RDPS R+SG NI +K L K++D AL + FS FG + + +A
Sbjct: 69 AG-TKLGSRYLRIAKIQRDPSKRRSGVNNILVKKLPKTVDTYALKELFSKFGRLTAIGLA 127
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNN 210
D G+S+G+ + FE +ESA A+ +++GM ++ + + V + + E + +F N
Sbjct: 128 CDEKGESRGYARISFEREESAVEAVKEMDGMEMDGQAIVVERYQAQHRDELL---KQFTN 184
Query: 211 VFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKC-FGFVNFENADDAAKAVEAL 269
++VKNLD + TDE L+ F YG ++SA V G +S+ G+V FE +DAA+AVE L
Sbjct: 185 LYVKNLDPAVTDEKLRAFFARYGAVSSAKVRDLGGVQSEVGLGYVAFEKHEDAARAVEEL 244
Query: 270 NGKKFDDREWYVGKAQKKSEREQ------ELKGQFEQAMKETVDKFQGLNLYIKNLGDSI 323
NGK E + KA+ + + + + Q + + NLY+K D++
Sbjct: 245 NGK-----ECEIAKAESTLDVSRFRSREERQRDRERQRRERAQQHSKYPNLYVKGFDDTV 299
Query: 324 DDEKLKELFSEFGTITSCKVMRDP-SGISKGSGFVAFSTPEEASRALAEMNGK-MIVSKP 381
E+L+ELF +G S VM D +G+S+ GFV+ AS+A+ E+NG + +P
Sbjct: 300 TSERLEELFQRYGETVSVTVMMDKETGMSRCFGFVSMKDQNAASQAIQELNGSTFLCPRP 359
Query: 382 LYVAVAQRKEERRARLQAQFSQMR 405
L+V A RK+ RR L+ + Q R
Sbjct: 360 LFVTYALRKDARRQNLEERSKQFR 383
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 94/190 (49%), Gaps = 21/190 (11%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRS-LGYGYVNYANPADAARA- 87
T+LYV +LD VTD +L F++ G V S +V RDL +S +G GYV + DAARA
Sbjct: 183 TNLYVKNLDPAVTDEKLRAFFARYGAVSSAKV-RDLGGVQSEVGLGYVAFEKHEDAARAV 241
Query: 88 ----------------LDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDH 131
LDV F + R+ + + S N+++K D ++
Sbjct: 242 EELNGKECEIAKAESTLDVSRFRSREERQRDRERQRRERAQQHSKYPNLYVKGFDDTVTS 301
Query: 132 KALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKLNG-MLINDKQVF 189
+ L + F +G +S + D +G S+ FGFV +++ +A AI +LNG + + +F
Sbjct: 302 ERLEELFQRYGETVSVTVMMDKETGMSRCFGFVSMKDQNAASQAIQELNGSTFLCPRPLF 361
Query: 190 VGHFLRKQER 199
V + LRK R
Sbjct: 362 VTYALRKDAR 371
>gi|147835778|emb|CAN72942.1| hypothetical protein VITISV_011270 [Vitis vinifera]
Length = 185
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 120/147 (81%), Positives = 129/147 (87%), Gaps = 1/147 (0%)
Query: 2 AQIQVQHQAQMSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRV 61
AQ+QVQ Q PN AAGA GNQF+TTSLYVGDL+ NV D QLYDLF+Q+G V+SVRV
Sbjct: 3 AQVQVQPQGPGPAPNS-AAGAGGNQFVTTSLYVGDLELNVNDPQLYDLFNQMGAVVSVRV 61
Query: 62 CRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIF 121
CRDLSTRRSLGYGYVNY+NP DAARALDVLNFTPLN K +RIMYSH DPSIRKSGTGNIF
Sbjct: 62 CRDLSTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPLRIMYSHCDPSIRKSGTGNIF 121
Query: 122 IKNLDKSIDHKALHDTFSSFGNILSCK 148
IKNLDK IDHKALHDTFS+FGNILSCK
Sbjct: 122 IKNLDKGIDHKALHDTFSAFGNILSCK 148
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 17/133 (12%)
Query: 211 VFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD-GDGKSKCFGFVNFENADDAAKAVEAL 269
++V +L+ + D L +F + G + S V RD +S +G+VN+ N DAA+A++ L
Sbjct: 32 LYVGDLELNVNDPQLYDLFNQMGAVVSVRVCRDLSTRRSLGYGYVNYSNPQDAARALDVL 91
Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLK 329
N + + + + + G N++IKNL ID + L
Sbjct: 92 NFTPLNGKPLRIMYSHCDPSIRKSGTG----------------NIFIKNLDKGIDHKALH 135
Query: 330 ELFSEFGTITSCK 342
+ FS FG I SCK
Sbjct: 136 DTFSAFGNILSCK 148
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 65/123 (52%), Gaps = 5/123 (4%)
Query: 117 TGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQ-SKGFGFVQFENKESAQNAI 175
T ++++ +L+ +++ L+D F+ G ++S ++ D S + S G+G+V + N + A A+
Sbjct: 29 TTSLYVGDLELNVNDPQLYDLFNQMGAVVSVRVCRDLSTRRSLGYGYVNYSNPQDAARAL 88
Query: 176 DKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTI 235
D LN +N K + + + + K+ N+F+KNLD+ + L F +G I
Sbjct: 89 DVLNFTPLNGKPLRIMY----SHCDPSIRKSGTGNIFIKNLDKGIDHKALHDTFSAFGNI 144
Query: 236 TSA 238
S
Sbjct: 145 LSC 147
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 307 DKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSG-ISKGSGFVAFSTPEEA 365
++F +LY+ +L +++D +L +LF++ G + S +V RD S S G G+V +S P++A
Sbjct: 25 NQFVTTSLYVGDLELNVNDPQLYDLFNQMGAVVSVRVCRDLSTRRSLGYGYVNYSNPQDA 84
Query: 366 SRALAEMNGKMIVSKPLYVAVAQ 388
+RAL +N + KPL + +
Sbjct: 85 ARALDVLNFTPLNGKPLRIMYSH 107
>gi|318087158|gb|ADV40171.1| putative polyA binding protein cytoplasmic 1 isoform 1 [Latrodectus
hesperus]
Length = 217
Score = 248 bits (634), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 118/209 (56%), Positives = 155/209 (74%), Gaps = 2/209 (0%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
+G + SLYVGDL +VT++ L++ FS G VLS+RVCRDL RRSLGY YVN+ P
Sbjct: 6 NGPNYPVASLYVGDLHNDVTEAMLFEKFSSAGPVLSIRVCRDLIARRSLGYAYVNFQQPV 65
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
DA RALD +NF + + IRIM+S RDPS+RKSG GN+FIKNLDKSID+KA++DTFS+FG
Sbjct: 66 DAERALDTMNFDMVKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 125
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 202
NILSCK+ATD SKG+GFV FE +E+A NAI K+NGML+N ++VFVG F+ + ERE
Sbjct: 126 NILSCKVATDEESNSKGYGFVHFETEEAANNAIQKVNGMLLNGRKVFVGKFVPRSEREKQ 185
Query: 203 AIKT--KFNNVFVKNLDESTTDEDLKKIF 229
+ +F NV++KN + DE L+++
Sbjct: 186 LGQKARRFMNVYIKNFGDDLDDEKLREML 214
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 118/217 (54%), Gaps = 15/217 (6%)
Query: 117 TGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATD-GSGQSKGFGFVQFENKESAQNAI 175
++++ +L + L + FSS G +LS ++ D + +S G+ +V F+ A+ A+
Sbjct: 12 VASLYVGDLHNDVTEAMLFEKFSSAGPVLSIRVCRDLIARRSLGYAYVNFQQPVDAERAL 71
Query: 176 DKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTI 235
D +N ++ + + + +R+ K+ NVF+KNLD+S ++ + F +G I
Sbjct: 72 DTMNFDMVKGRPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGNI 127
Query: 236 TSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELK 295
S V D + SK +GFV+FE + A A++ +NG + R+ +VGK +SERE++L
Sbjct: 128 LSCKVATDEESNSKGYGFVHFETEEAANNAIQKVNGMLLNGRKVFVGKFVPRSEREKQLG 187
Query: 296 GQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELF 332
+ + M N+YIKN GD +DDEKL+E+
Sbjct: 188 QKARRFM----------NVYIKNFGDDLDDEKLREML 214
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 91/188 (48%), Gaps = 17/188 (9%)
Query: 211 VFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGK-SKCFGFVNFENADDAAKAVEAL 269
++V +L T+ L + F G + S V RD + S + +VNF+ DA +A++ +
Sbjct: 15 LYVGDLHNDVTEAMLFEKFSSAGPVLSIRVCRDLIARRSLGYAYVNFQQPVDAERALDTM 74
Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLK 329
N R + +Q+ + G N++IKNL SID++ +
Sbjct: 75 NFDMVKGRPIRIMWSQRDPSLRKSGVG----------------NVFIKNLDKSIDNKAMY 118
Query: 330 ELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQR 389
+ FS FG I SCKV D SKG GFV F T E A+ A+ ++NG ++ + ++V
Sbjct: 119 DTFSAFGNILSCKVATDEESNSKGYGFVHFETEEAANNAIQKVNGMLLNGRKVFVGKFVP 178
Query: 390 KEERRARL 397
+ ER +L
Sbjct: 179 RSEREKQL 186
>gi|440913528|gb|ELR62976.1| Polyadenylate-binding protein 4, partial [Bos grunniens mutus]
Length = 196
Score = 248 bits (632), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 120/195 (61%), Positives = 149/195 (76%), Gaps = 3/195 (1%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ PADA RALD
Sbjct: 3 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 62
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF + K IRIM+S RDPS+RKSG GN+FIKNLD SID KAL+DTFS+FGNILSCK+
Sbjct: 63 MNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDNSIDDKALYDTFSAFGNILSCKVV 122
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET-VAIKTK-F 208
D +G SKG+ FV FE +E+A AI+K+NGML+ND++VFVG F ++ERE + K K F
Sbjct: 123 CDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEF 181
Query: 209 NNVFVKNLDESTTDE 223
NV++KN E DE
Sbjct: 182 TNVYIKNFGEEVDDE 196
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 114/210 (54%), Gaps = 16/210 (7%)
Query: 118 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAID 176
++++ +L + L++ FS G +LS ++ D + +S G+ +V F+ A+ A+D
Sbjct: 2 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 61
Query: 177 KLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTIT 236
+N +I K + + +R+ K+ NVF+KNLD S D+ L F +G I
Sbjct: 62 TMNFDVIKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDNSIDDKALYDTFSAFGNIL 117
Query: 237 SAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKG 296
S V+ D +G SK + FV+FE + A KA+E +NG +DR+ +VG+ + + ERE EL
Sbjct: 118 SCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGA 176
Query: 297 QFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
+ ++ N+YIKN G+ +DDE
Sbjct: 177 KAKEFT----------NVYIKNFGEEVDDE 196
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 102/201 (50%), Gaps = 18/201 (8%)
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENADDAAKAVEA 268
+++V +L T+ L + F G + S V RD +S + +VNF+ DA +A++
Sbjct: 3 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 62
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
+N + + +Q+ + G N++IKNL +SIDD+ L
Sbjct: 63 MNFDVIKGKPIRIMWSQRDPSLRKSGVG----------------NVFIKNLDNSIDDKAL 106
Query: 329 KELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
+ FS FG I SCKV+ D +G SKG FV F T E A +A+ +MNG ++ + ++V +
Sbjct: 107 YDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFK 165
Query: 389 RKEERRARLQAQFSQMRPVAM 409
++ER A L A+ + V +
Sbjct: 166 SRKEREAELGAKAKEFTNVYI 186
>gi|384495100|gb|EIE85591.1| hypothetical protein RO3G_10301 [Rhizopus delemar RA 99-880]
Length = 359
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 141/366 (38%), Positives = 210/366 (57%), Gaps = 54/366 (14%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
TSLYVG+L ++ ++ L + F G V SV+VCRD T +SLGY ++N+ P D + A +
Sbjct: 39 TSLYVGELAPHIDEAMLKEHF---GNVKSVQVCRDSVTNQSLGYAHINFYTPQDCSAAFE 95
Query: 90 VLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKI 149
LN + ++ + R+M S R+ + R SG GNI +KNL ++D+K+L+DTFS +GN++SC++
Sbjct: 96 NLNHSKIDGTTYRLMISERETTKRVSGAGNIILKNLHPNVDNKSLYDTFSRWGNVISCRV 155
Query: 150 ATDGSGQS-KGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAI---- 204
+G S KG+GFV ++ +A+ AI +NG ++ K+V H + K E+E++
Sbjct: 156 FNKLTGGSVKGYGFVNYDTYAAAERAISFVNGKMLFGKEVHASHQVLKNEKESLLSHNDQ 215
Query: 205 -KTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAA 263
+F NV+VKNL T++DL ++F G ++S +V RD K K FGFVNFE +DA
Sbjct: 216 QHCRFTNVYVKNLSSDVTEDDLGELFSTIGPVSSVLVQRDDQHKPKGFGFVNFELPEDAE 275
Query: 264 KAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSI 323
+AV L+ K F + +
Sbjct: 276 RAVNELHDKDF--------------------------------------------FAEDV 291
Query: 324 DDEKLKELFSEFGTITSCKVMRDPS-GISKGSGFVAFSTPEEASRALAEMNGKMIVSKPL 382
DE L F +GTITS K+M+D S G KG GFV FS+ +EA+RA+AEMNG+ I SKP+
Sbjct: 292 TDEILINNFLPYGTITSAKIMKDESTGAPKGFGFVCFSSSDEANRAVAEMNGRFISSKPI 351
Query: 383 YVAVAQ 388
YVA+AQ
Sbjct: 352 YVALAQ 357
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 82/169 (48%), Gaps = 18/169 (10%)
Query: 231 EYGTITSAVVMRDG-DGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSE 289
+G + S V RD +S + +NF D + A E LN K D + + +++++
Sbjct: 58 HFGNVKSVQVCRDSVTNQSLGYAHINFYTPQDCSAAFENLNHSKIDGTTYRLMISERETT 117
Query: 290 REQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSG 349
+ G N+ +KNL ++D++ L + FS +G + SC+V +G
Sbjct: 118 KRVSGAG----------------NIILKNLHPNVDNKSLYDTFSRWGNVISCRVFNKLTG 161
Query: 350 IS-KGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARL 397
S KG GFV + T A RA++ +NGKM+ K ++ + K E+ + L
Sbjct: 162 GSVKGYGFVNYDTYAAAERAISFVNGKMLFGKEVHASHQVLKNEKESLL 210
>gi|392339709|ref|XP_003753884.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) binding protein,
cytoplasmic 1-like [Rattus norvegicus]
Length = 475
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 130/294 (44%), Positives = 183/294 (62%), Gaps = 32/294 (10%)
Query: 24 GNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPAD 83
G+ +SLYVGDL +VT++ LY++FS +G +LS+RVCRD++TRRSLGY Y+N+ PAD
Sbjct: 5 GHGCSLSSLYVGDLHPDVTEAMLYEMFSPIGTILSIRVCRDVATRRSLGYAYINFQQPAD 64
Query: 84 AARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGN 143
A RALD +NF + + IRIM+SHRDP +R+SG GNIFIKNL+ SID+KAL+DTFS+FG+
Sbjct: 65 AERALDTMNFEMIKGQPIRIMWSHRDPGLRRSGMGNIFIKNLENSIDNKALYDTFSTFGS 124
Query: 144 ILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVA 203
ILS K+ + G S+GFGFV FE E+AQ AI+ +NGML+ND++V R ++A
Sbjct: 125 ILSSKVVYNEHG-SRGFGFVHFETHEAAQKAINTMNGMLLNDRKV------RSDYPWSLA 177
Query: 204 IKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAA 263
+L +T I+S + SK FGFV F + ++A
Sbjct: 178 -----------SLCPAT-------------LISSCFQVMTESSHSKGFGFVCFSSPEEAT 213
Query: 264 KAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETV-DKFQGLNLYI 316
KAV +NG+ + YV AQ+K ER+ L Q+ + + +V FQ Y+
Sbjct: 214 KAVTEMNGRIVGTKPLYVALAQRKEERKAILTNQYRRRLSRSVLSSFQQPTSYL 267
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 141/510 (27%), Positives = 225/510 (44%), Gaps = 117/510 (22%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATD-GSGQSKGFGFVQFENKESAQNAIDK 177
++++ +L + L++ FS G ILS ++ D + +S G+ ++ F+ A+ A+D
Sbjct: 12 SLYVGDLHPDVTEAMLYEMFSPIGTILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 178 LNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITS 237
+N +I + + + R+ ++ N+F+KNL+ S ++ L F +G+I S
Sbjct: 72 MNFEMIKGQPIRI----MWSHRDPGLRRSGMGNIFIKNLENSIDNKALYDTFSTFGSILS 127
Query: 238 AVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQ 297
+ V+ + G S+ FGFV+FE + A KA+ +NG +DR + +S+ L
Sbjct: 128 SKVVYNEHG-SRGFGFVHFETHEAAQKAINTMNGMLLNDR-------KVRSDYPWSLASL 179
Query: 298 FEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFV 357
+ I+SC + S SKG GFV
Sbjct: 180 CPATL-----------------------------------ISSCFQVMTESSHSKGFGFV 204
Query: 358 AFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQF---------------- 401
FS+PEEA++A+ EMNG+++ +KPLYVA+AQRKEER+A L Q+
Sbjct: 205 CFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEERKAILTNQYRRRLSRSVLSSFQQPT 264
Query: 402 SQMRP--------------VAMGPSVP-PRMPMYPPGPSGLGQQFLYGQAPPA---IIPP 443
S + P ++ P P PR P GPS PPA + P
Sbjct: 265 SYLLPAVHQSTTQTMYYSSASIAPMQPDPRWTAQPHGPS--------STCPPAASVVQPL 316
Query: 444 QMPPRGHAYRYPLGRNMQDFPFDM-------------GAGSMLP----------VPVDMG 480
P + + P G GS +P V
Sbjct: 317 STAPHPCIHLSSASQASSQVPHTQRVVNIGTQTTGPGGEGSCIPGQPLLAHRGSSAVHSA 376
Query: 481 AGIPRRDASVGQPMPITALSTALANASP-EQQRTLLGESLYPLVEQLERDAAAKVTGMLL 539
G+ V P+T ++ +A+P +Q+ ++GE LY L+ K+TGMLL
Sbjct: 377 HGVQESTVYVPGHQPLT---VSMLDAAPLHEQKQMIGERLYSLIHDACAPLTGKITGMLL 433
Query: 540 EMDQTEVLHLLESPEALKAKVAEAMEVLRS 569
EMD E+L LLESPE+L AK+ EA+ VL++
Sbjct: 434 EMDNLELLLLLESPESLHAKIEEAVAVLKA 463
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 92/175 (52%), Gaps = 26/175 (14%)
Query: 208 FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD-GDGKSKCFGFVNFENADDAAKAV 266
++++V +L T+ L ++F GTI S V RD +S + ++NF+ DA +A+
Sbjct: 10 LSSLYVGDLHPDVTEAMLYEMFSPIGTILSIRVCRDVATRRSLGYAYINFQQPADAERAL 69
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVD---KFQGL-NLYIKNLGDS 322
+ +N + +KGQ + M D + G+ N++IKNL +S
Sbjct: 70 DTMNF--------------------EMIKGQPIRIMWSHRDPGLRRSGMGNIFIKNLENS 109
Query: 323 IDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMI 377
ID++ L + FS FG+I S KV+ + G S+G GFV F T E A +A+ MNG ++
Sbjct: 110 IDNKALYDTFSTFGSILSSKVVYNEHG-SRGFGFVHFETHEAAQKAINTMNGMLL 163
>gi|326429915|gb|EGD75485.1| poly(A)-binding protein [Salpingoeca sp. ATCC 50818]
Length = 1688
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 178/497 (35%), Positives = 246/497 (49%), Gaps = 93/497 (18%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
TSLYVGDL V +++L++LFS +G V+SVRVCRD T SLGYGYVN+ DA A+
Sbjct: 248 TSLYVGDLSPQVNETELFNLFSSIGSVMSVRVCRDQITHGSLGYGYVNFNKAEDAEAAMG 307
Query: 90 VLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKI 149
LNF L+ + IRIM RDP R+S NI + L L DTF FG ILSCK
Sbjct: 308 QLNFHDLHGRHIRIMKVERDPKKRRSDPRNIVVTGLPADTTSVHLRDTFEQFGKILSCKA 367
Query: 150 ATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLI-NDKQVFVGHFL-RKQERETVAIKTK 207
D SG+ +GFGFV FE+ + A+ AI + NG D+++ V F RKQ + +TK
Sbjct: 368 VLDHSGRCRGFGFVHFEDPKVAERAIAEANGKDAGGDRKLRVAPFKPRKQREQEQEERTK 427
Query: 208 -FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVV----MRDGDGKSKCFGFVNFENADDA 262
F NV+VK+L +E+L K+F YG ITS + ++D + + +GFVNF + + A
Sbjct: 428 NFTNVYVKSLRRDADEEELGKLFEPYGDITSKALRTYKLKDTE---RPYGFVNFADTEAA 484
Query: 263 AKAVEA----------------LNGKKFDDREWYVGK-AQKKSEREQ------ELKG--Q 297
K VE GKK +D V + A + ER +L G
Sbjct: 485 QKCVEEGEMHQRDIFYVDGMAFEEGKKVEDFVKTVEECAGSEVERHHLQVADGKLSGFIL 544
Query: 298 FEQAMKETVDK-FQGL--------------NLYI-------------------------- 316
F++ +ETVDK GL LY+
Sbjct: 545 FKEHGEETVDKAMTGLPEKMEAATDHISKAKLYVQRAQTKQERIRRLRRRLQERRRELRQ 604
Query: 317 -------KNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRAL 369
KN +++ +E L++ F E G + KVMRD G+S+ GFV F+T EEA A+
Sbjct: 605 RGGNLFVKNFNENVTEEDLRKFFEECGHVIDVKVMRDMEGVSRCFGFVIFATREEAESAI 664
Query: 370 AEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQ 429
A+ N + + +P+YVA ++E R + Q Q Q + V M P PRMPM GP
Sbjct: 665 AKKNRQTLQDRPIYVAFHLTRQE-RCKQQPQHPQ-QGVYMYPQC-PRMPMGAFGPGYYNP 721
Query: 430 QFLYGQAPPAIIPPQMP 446
Q + ++ PQMP
Sbjct: 722 QMM-------MVNPQMP 731
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 43/69 (62%)
Query: 499 LSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKA 558
+++ LA+ EQ+R LG+ LY V ++++ A K+TGMLL D +++LL S AL+
Sbjct: 1019 VTSQLAHMDEEQRRGYLGDMLYHRVAGIDKERAPKITGMLLAYDAGHLMNLLASDAALRE 1078
Query: 559 KVAEAMEVL 567
+V A +L
Sbjct: 1079 QVVLAQNIL 1087
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 42/69 (60%)
Query: 499 LSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKA 558
+++ LA+ EQ+R LG+ L V ++++ A K+TGMLL D +++LL S AL+
Sbjct: 917 VTSQLAHMDEEQRRRYLGDMLCHRVASIDKERAPKITGMLLAYDAGHLMNLLVSDAALRE 976
Query: 559 KVAEAMEVL 567
+V A +L
Sbjct: 977 QVVLARNIL 985
Score = 45.8 bits (107), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 311 GLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP-SGISKGSGFVAFSTPEEASRAL 369
G +LY+ +L +++ +L LFS G++ S +V RD + S G G+V F+ E+A A+
Sbjct: 247 GTSLYVGDLSPQVNETELFNLFSSIGSVMSVRVCRDQITHGSLGYGYVNFNKAEDAEAAM 306
Query: 370 AEMNGKMIVSKPLYVAVAQRKEERR 394
++N + + + + +R ++R
Sbjct: 307 GQLNFHDLHGRHIRIMKVERDPKKR 331
>gi|294939182|ref|XP_002782349.1| RNA-binding motif, single-stranded-interacting protein, putative
[Perkinsus marinus ATCC 50983]
gi|239893941|gb|EER14144.1| RNA-binding motif, single-stranded-interacting protein, putative
[Perkinsus marinus ATCC 50983]
Length = 266
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 115/223 (51%), Positives = 161/223 (72%), Gaps = 3/223 (1%)
Query: 15 PNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYG 74
P G QF SLY GDL +V ++ LY++F+ +G V S+RVCRD TR+SLGY
Sbjct: 35 PAPTVGGVPTQQF--ASLYAGDLAPDVNEAVLYEVFNGIGPVASIRVCRDSVTRKSLGYA 92
Query: 75 YVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKAL 134
Y+N+ N ADA RALD LN++P+N + R+M+SHRDP++R+SG GN+++KNLD++ID+KAL
Sbjct: 93 YINFHNVADAERALDTLNYSPINGRPCRLMWSHRDPALRRSGAGNVYVKNLDRNIDNKAL 152
Query: 135 HDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFL 194
+DTFS FGNILSCK+A G+S+GFGFV FE+ ESA+ AI KLNGM I +K V+V F
Sbjct: 153 YDTFSLFGNILSCKVALTPDGKSRGFGFVHFESDESAEAAIAKLNGMQIGEKTVYVAQFK 212
Query: 195 RKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITS 237
+ +R + K F NV++K++ S T+E +++ FG +G ITS
Sbjct: 213 KTADRSDGSPK-NFTNVYIKHIPPSWTEEKIREEFGAFGEITS 254
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 112/223 (50%), Gaps = 18/223 (8%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDK 177
+++ +L ++ L++ F+ G + S ++ D + +S G+ ++ F N A+ A+D
Sbjct: 49 SLYAGDLAPDVNEAVLYEVFNGIGPVASIRVCRDSVTRKSLGYAYINFHNVADAERALDT 108
Query: 178 LNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITS 237
LN IN + L R+ ++ NV+VKNLD + ++ L F +G I S
Sbjct: 109 LNYSPINGRPCR----LMWSHRDPALRRSGAGNVYVKNLDRNIDNKALYDTFSLFGNILS 164
Query: 238 AVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQ 297
V DGKS+ FGFV+FE+ + A A+ LNG + ++ YV + +K ++R
Sbjct: 165 CKVALTPDGKSRGFGFVHFESDESAEAAIAKLNGMQIGEKTVYVAQFKKTADRSDGSPKN 224
Query: 298 FEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITS 340
F N+YIK++ S +EK++E F FG ITS
Sbjct: 225 F-------------TNVYIKHIPPSWTEEKIREEFGAFGEITS 254
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 99/207 (47%), Gaps = 17/207 (8%)
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENADDAAKA 265
+F +++ +L + L ++F G + S V RD KS + ++NF N DA +A
Sbjct: 46 QFASLYAGDLAPDVNEAVLYEVFNGIGPVASIRVCRDSVTRKSLGYAYINFHNVADAERA 105
Query: 266 VEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDD 325
++ LN + R + + + + G N+Y+KNL +ID+
Sbjct: 106 LDTLNYSPINGRPCRLMWSHRDPALRRSGAG----------------NVYVKNLDRNIDN 149
Query: 326 EKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVA 385
+ L + FS FG I SCKV P G S+G GFV F + E A A+A++NG I K +YVA
Sbjct: 150 KALYDTFSLFGNILSCKVALTPDGKSRGFGFVHFESDESAEAAIAKLNGMQIGEKTVYVA 209
Query: 386 VAQRKEERRARLQAQFSQMRPVAMGPS 412
++ +R F+ + + PS
Sbjct: 210 QFKKTADRSDGSPKNFTNVYIKHIPPS 236
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 65/125 (52%), Gaps = 6/125 (4%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++YV +LD N+ + LYD FS G +LS +V +S G+G+V++ + A A+
Sbjct: 137 NVYVKNLDRNIDNKALYDTFSLFGNILSCKVAL-TPDGKSRGFGFVHFESDESAEAAIAK 195
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGT----GNIFIKNLDKSIDHKALHDTFSSFGNILS 146
LN + K++ + + + R G+ N++IK++ S + + + F +FG I S
Sbjct: 196 LNGMQIGEKTVYVA-QFKKTADRSDGSPKNFTNVYIKHIPPSWTEEKIREEFGAFGEITS 254
Query: 147 CKIAT 151
+ T
Sbjct: 255 FAMQT 259
>gi|326430672|gb|EGD76242.1| polyadenylate binding protein [Salpingoeca sp. ATCC 50818]
Length = 765
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 185/511 (36%), Positives = 249/511 (48%), Gaps = 90/511 (17%)
Query: 17 GVAAGASGN-QFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGY 75
GVA N Q SLYVGDL V +++L++LFS +G V+SVRVCRD TR SLGYGY
Sbjct: 65 GVAGPVPANPQGAAASLYVGDLSPQVNETELFNLFSSIGSVMSVRVCRDQITRSSLGYGY 124
Query: 76 VNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALH 135
VN+ DA A+ LNF L+ + IRIM RDP R+SG GNIFI L L
Sbjct: 125 VNFNKAEDAEAAMGQLNFHDLHGRHIRIMKVERDPKKRRSGVGNIFISGLPADTTSVHLR 184
Query: 136 DTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLI-NDKQVFVGHFL 194
DTF FG ILSCK D SG+ +GFGFV FE+ + A+ AI + NG D+++ V F
Sbjct: 185 DTFEQFGKILSCKAVLDHSGRCRGFGFVHFEDPKVAERAIAEANGKDAGGDRKLRVAPFK 244
Query: 195 -RKQERETVAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVV----MRDGDGKS 248
RKQ + +TK F NV+VK+L +E+L K+F YG ITS + ++D +
Sbjct: 245 PRKQREQEQEERTKNFTNVYVKSLRRDADEEELGKLFEPYGDITSKALRTYKLKDTE--- 301
Query: 249 KCFGFVNFENADDAAKAVEA----------------LNGKKFDDREWYVGK-AQKKSERE 291
+ +GFVNF + + A K VE GKK +D V + A + ER
Sbjct: 302 RPYGFVNFADTEAAQKCVEEGEMHQRDIFYVDGMAFEEGKKVEDFVKTVEECAGSEVERH 361
Query: 292 Q------ELKG--QFEQAMKETVDK-FQGLNLYIKNLGDSIDDEKL-------------- 328
+L G F++ +ETVDK GL ++ D I KL
Sbjct: 362 HLQVADGKLSGFILFKEHGEETVDKAMTGLPEKMEAATDHISKAKLYVQRAQKKQERIRR 421
Query: 329 ---------------------------------KELFSEFGTITSCKVMRDPSGISKGSG 355
++ F E G + S KVMRD G+S+ G
Sbjct: 422 LRRRLQERRRELRQRGGNLFVKNFNENVTEEDLRKFFEECGHVMSVKVMRDKEGVSRCFG 481
Query: 356 FVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPP 415
FV F+T EEA A+A+ N + + +P+YVA ++ER+AR Q Q Q M + P
Sbjct: 482 FVTFATREEAESAIAKKNRQPLQDRPIYVAFHLTRQERQARKQQQHPQHPQQGM--YMYP 539
Query: 416 RMPMYPPGPSGLGQQFLYGQAPPAIIPPQMP 446
+ P P G G G Y ++ PQMP
Sbjct: 540 QYPGMPMGAFGPG----YYNPQMMMVNPQMP 566
>gi|273068254|gb|ACZ97550.1| apoptosis-promoting RNA-binding protein [Ornithodoros moubata]
Length = 204
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 119/204 (58%), Positives = 155/204 (75%), Gaps = 2/204 (0%)
Query: 87 ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
ALD +NF P+ NK IRIM+S RDPS+RKSG GN+FIKNLDKSID+KA++DTFS+FGNILS
Sbjct: 1 ALDTMNFDPIKNKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGNILS 60
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVA--I 204
C++ATD SKG+GFV FE +E+A NAI K+NGML+N K+VFVG F+ ++ERE +
Sbjct: 61 CRVATDEEANSKGYGFVHFETEEAANNAISKVNGMLLNGKKVFVGRFIPRKERERLLGDK 120
Query: 205 KTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAK 264
+F NV++KN + DE L IF +YG +TSA VM D +GK++ FGFV+FE+ + A K
Sbjct: 121 ARRFTNVYIKNFGDELDDEKLVVIFDKYGKVTSAKVMVDENGKNRGFGFVSFEDPECAEK 180
Query: 265 AVEALNGKKFDDREWYVGKAQKKS 288
AVE LNGK + YVG+AQKK+
Sbjct: 181 AVEELNGKDVGGKPLYVGRAQKKA 204
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 117/193 (60%), Gaps = 10/193 (5%)
Query: 198 ERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFE 257
+R+ K+ NVF+KNLD+S ++ + F +G I S V D + SK +GFV+FE
Sbjct: 21 QRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGNILSCRVATDEEANSKGYGFVHFE 80
Query: 258 NADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIK 317
+ A A+ +NG + ++ +VG+ + ERE+ L ++A + T N+YIK
Sbjct: 81 TEEAANNAISKVNGMLLNGKKVFVGRFIPRKERERLLG---DKARRFT-------NVYIK 130
Query: 318 NLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMI 377
N GD +DDEKL +F ++G +TS KVM D +G ++G GFV+F PE A +A+ E+NGK +
Sbjct: 131 NFGDELDDEKLVVIFDKYGKVTSAKVMVDENGKNRGFGFVSFEDPECAEKAVEELNGKDV 190
Query: 378 VSKPLYVAVAQRK 390
KPLYV AQ+K
Sbjct: 191 GGKPLYVGRAQKK 203
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 93/172 (54%), Gaps = 7/172 (4%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ +LD ++ + +YD FS G +LS RV D S GYG+V++ A A+
Sbjct: 33 NVFIKNLDKSIDNKAMYDTFSAFGNILSCRVATDEEA-NSKGYGFVHFETEEAANNAISK 91
Query: 91 LNFTPLNNKSIRI-MYSHRDPSIRKSGT-----GNIFIKNLDKSIDHKALHDTFSSFGNI 144
+N LN K + + + R R G N++IKN +D + L F +G +
Sbjct: 92 VNGMLLNGKKVFVGRFIPRKERERLLGDKARRFTNVYIKNFGDELDDEKLVVIFDKYGKV 151
Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRK 196
S K+ D +G+++GFGFV FE+ E A+ A+++LNG + K ++VG +K
Sbjct: 152 TSAKVMVDENGKNRGFGFVSFEDPECAEKAVEELNGKDVGGKPLYVGRAQKK 203
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 313 NLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEM 372
N++IKNL SID++ + + FS FG I SC+V D SKG GFV F T E A+ A++++
Sbjct: 33 NVFIKNLDKSIDNKAMYDTFSAFGNILSCRVATDEEANSKGYGFVHFETEEAANNAISKV 92
Query: 373 NGKMIVSKPLYVA-VAQRKEERR 394
NG ++ K ++V RKE R
Sbjct: 93 NGMLLNGKKVFVGRFIPRKERER 115
>gi|71993217|ref|NP_001021711.1| Protein PAB-1, isoform c [Caenorhabditis elegans]
gi|38422743|emb|CAE54917.1| Protein PAB-1, isoform c [Caenorhabditis elegans]
Length = 586
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 139/328 (42%), Positives = 184/328 (56%), Gaps = 50/328 (15%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
+G+ + SLYVGDL +V +S L++ FS G VLS+RVCRD +TR SLGY YVN+ PA
Sbjct: 25 TGSSYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPA 84
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSI------------- 129
DA RA+D +NF L+ K +RIM+S RDP++R+SG GNIFIKNLDK
Sbjct: 85 DAERAMDTMNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVFVGKFQPRAQRNRE 144
Query: 130 -----------------DH---KALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKE 169
DH + L F+ FGNI SC++ T G+SKGFGFV F N E
Sbjct: 145 LGETAKQFTNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTV-EGKSKGFGFVAFANPE 203
Query: 170 SAQNAIDKLNGMLI--NDKQVFVGHFLRKQERETVAIKTKFN-------------NVFVK 214
A+ A+ L+ I D ++ V +K ER +K K N++VK
Sbjct: 204 EAETAVQALHDSTIEGTDLKLHVCRAQKKSERH-AELKKKHEQHKAERMQKYQGVNLYVK 262
Query: 215 NLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKF 274
NLDE+ D+ LKK F YG ITSA VM D +G+SK FGFV FE ++A AV +N K
Sbjct: 263 NLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMNSKMV 322
Query: 275 DDREWYVGKAQKKSEREQELKGQFEQAM 302
+ YV AQ+K +R +L Q+ Q +
Sbjct: 323 CSKPLYVAIAQRKEDRRAQLASQYMQRL 350
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 136/343 (39%), Positives = 200/343 (58%), Gaps = 35/343 (10%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQ-SKGFGFVQFENKESAQNAIDK 177
++++ +L ++ L + FS+ G +LS ++ D + + S G+ +V F+ A+ A+D
Sbjct: 33 SLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDT 92
Query: 178 LNGMLINDK---------------------------QVFVGHFLRKQER--ETVAIKTKF 208
+N ++ K +VFVG F + +R E +F
Sbjct: 93 MNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVFVGKFQPRAQRNRELGETAKQF 152
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
NV+VKN + E L+K+F ++G ITS VM +GKSK FGFV F N ++A AV+A
Sbjct: 153 TNVYVKNFGDHYNKETLEKLFAKFGNITSCEVM-TVEGKSKGFGFVAFANPEEAETAVQA 211
Query: 269 LNGKKFD--DREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
L+ + D + +V +AQKKSER ELK + EQ E + K+QG+NLY+KNL +++DD+
Sbjct: 212 LHDSTIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDD 271
Query: 327 KLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 386
LK+ F +G ITS KVM D +G SKG GFV F PEEA+ A+ EMN KM+ SKPLYVA+
Sbjct: 272 GLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYVAI 331
Query: 387 AQRKEERRARLQAQFSQ-MRPVAMGPSVPPRMPMYPPGPSGLG 428
AQRKE+RRA+L +Q+ Q + + M +V P MY P G G
Sbjct: 332 AQRKEDRRAQLASQYMQRLASMRMHGNV-PGAAMYNPTQPGPG 373
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 58/87 (66%), Gaps = 6/87 (6%)
Query: 490 VGQPMPITALSTALANASPEQQRTLLGESLYPLVEQL---ERDAAAKVTGMLLEMDQTEV 546
+G P+T S LA A+P++Q+ LLGE +Y L+E+L +DA K+TGM+LE+D +E+
Sbjct: 503 IGGQEPLT--SAMLAAAAPQEQKQLLGERIYALIEKLYPGHKDAG-KITGMMLEIDNSEL 559
Query: 547 LHLLESPEALKAKVAEAMEVLRSVAQQ 573
+ +L+ E ++KV EA VL S +Q
Sbjct: 560 IMMLQDSELFRSKVDEAASVLVSAQKQ 586
>gi|400260922|pdb|4F02|A Chain A, Crystal Structure Of The Pabp-Binding Site Of Eif4g In
Complex With Rrm1-2 Of Pabp And Poly(A)
gi|400260925|pdb|4F02|D Chain D, Crystal Structure Of The Pabp-Binding Site Of Eif4g In
Complex With Rrm1-2 Of Pabp And Poly(A)
Length = 213
Score = 241 bits (614), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 115/187 (61%), Positives = 146/187 (78%), Gaps = 2/187 (1%)
Query: 14 GPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGY 73
GP G + S + SLYVGDL +VT++ LY+ FS G +LS+RVCRD+ TRRSLGY
Sbjct: 1 GPLG-SMNPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGY 59
Query: 74 GYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKA 133
YVN+ PADA RALD +NF + K +RIM+S RDPS+RKSG GNIFIKNLDKSID+KA
Sbjct: 60 AYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKA 119
Query: 134 LHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHF 193
L+DTFS+FGNILSCK+ D +G SKG+GFV FE +E+A+ AI+K+NGML+ND++VFVG F
Sbjct: 120 LYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRF 178
Query: 194 LRKQERE 200
++ERE
Sbjct: 179 KSRKERE 185
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 110/204 (53%), Gaps = 6/204 (2%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFEN 167
+PS ++++ +L + L++ FS G ILS ++ D + +S G+ +V F+
Sbjct: 7 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 66
Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
A+ A+D +N +I K V + +R+ K+ N+F+KNLD+S ++ L
Sbjct: 67 PADAERALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYD 122
Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
F +G I S V+ D +G SK +GFV+FE + A +A+E +NG +DR+ +VG+ + +
Sbjct: 123 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 181
Query: 288 SEREQELKGQFEQAMKETVDKFQG 311
ERE EL + ++ V + G
Sbjct: 182 KEREAELGARAKEFYPYDVPDYAG 205
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 108/200 (54%), Gaps = 22/200 (11%)
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENADDAAKAVEA 268
+++V +L T+ L + F G I S V RD +S + +VNF+ DA +A++
Sbjct: 17 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 76
Query: 269 LNGKKFDDREWYVGKAQK--KSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
+N FD + GK + S+R+ L+ K V N++IKNL SID++
Sbjct: 77 MN---FDVIK---GKPVRIMWSQRDPSLR-------KSGVG-----NIFIKNLDKSIDNK 118
Query: 327 KLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 386
L + FS FG I SCKV+ D +G SKG GFV F T E A RA+ +MNG ++ + ++V
Sbjct: 119 ALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGR 177
Query: 387 AQRKEERRARLQAQFSQMRP 406
+ ++ER A L A+ + P
Sbjct: 178 FKSRKEREAELGARAKEFYP 197
>gi|6137350|pdb|1CVJ|A Chain A, X-Ray Crystal Structure Of The Poly(A)-Binding Protein In
Complex With Polyadenylate Rna
gi|6137351|pdb|1CVJ|B Chain B, X-Ray Crystal Structure Of The Poly(A)-Binding Protein In
Complex With Polyadenylate Rna
gi|6137352|pdb|1CVJ|C Chain C, X-Ray Crystal Structure Of The Poly(A)-Binding Protein In
Complex With Polyadenylate Rna
gi|6137353|pdb|1CVJ|D Chain D, X-Ray Crystal Structure Of The Poly(A)-Binding Protein In
Complex With Polyadenylate Rna
gi|6137354|pdb|1CVJ|E Chain E, X-Ray Crystal Structure Of The Poly(A)-Binding Protein In
Complex With Polyadenylate Rna
gi|6137355|pdb|1CVJ|F Chain F, X-Ray Crystal Structure Of The Poly(A)-Binding Protein In
Complex With Polyadenylate Rna
gi|6137356|pdb|1CVJ|G Chain G, X-Ray Crystal Structure Of The Poly(A)-Binding Protein In
Complex With Polyadenylate Rna
gi|6137357|pdb|1CVJ|H Chain H, X-Ray Crystal Structure Of The Poly(A)-Binding Protein In
Complex With Polyadenylate Rna
Length = 190
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 112/179 (62%), Positives = 142/179 (79%), Gaps = 1/179 (0%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
S + SLYVGDL +VT++ LY+ FS G +LS+RVCRD+ TRRSLGY YVN+ PA
Sbjct: 4 SAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPA 63
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
DA RALD +NF + K +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FG
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFG 123
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
NILSCK+ D +G SKG+GFV FE +E+A+ AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 124 NILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 104/187 (55%), Gaps = 6/187 (3%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFEN 167
+PS ++++ +L + L++ FS G ILS ++ D + +S G+ +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
A+ A+D +N +I K V + +R+ K+ N+F+KNLD+S ++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYD 117
Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
F +G I S V+ D +G SK +GFV+FE + A +A+E +NG +DR+ +VG+ + +
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 288 SEREQEL 294
ERE EL
Sbjct: 177 KEREAEL 183
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 99/192 (51%), Gaps = 18/192 (9%)
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENADDAAKAVEA 268
+++V +L T+ L + F G I S V RD +S + +VNF+ DA +A++
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
+N + + +Q+ + G N++IKNL SID++ L
Sbjct: 72 MNFDVIKGKPVRIMWSQRDPSLRKSGVG----------------NIFIKNLDKSIDNKAL 115
Query: 329 KELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
+ FS FG I SCKV+ D +G SKG GFV F T E A RA+ +MNG ++ + ++V +
Sbjct: 116 YDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFK 174
Query: 389 RKEERRARLQAQ 400
++ER A L A+
Sbjct: 175 SRKEREAELGAR 186
>gi|444720785|gb|ELW61557.1| Polyadenylate-binding protein 1 [Tupaia chinensis]
Length = 232
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 119/229 (51%), Positives = 160/229 (69%), Gaps = 3/229 (1%)
Query: 65 LSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKN 124
+ T SLGY YV++ P D RALD +NF + K +RIM+S DPS+ KS NIFIKN
Sbjct: 1 MITCHSLGYTYVDFQKPTDMERALDTMNFDVIKGKPVRIMWSQHDPSLHKSEVSNIFIKN 60
Query: 125 LDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLIN 184
L KSID+KAL+DTF +FGNILSCK+ D +G SKG+GFV FE +E+ + AI+K++GML+N
Sbjct: 61 LGKSIDNKALYDTFPAFGNILSCKVVCDENG-SKGYGFVHFETQEAVERAIEKMSGMLLN 119
Query: 185 DKQVFVGHFLRKQERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMR 242
D +VFVG F ++ERE A +F NV++KN E DE LK +FG++G VM
Sbjct: 120 DFKVFVGQFKSRKEREAELGARAKEFTNVYIKNFGEDMDDEHLKDLFGKFGPALRVKVMT 179
Query: 243 DGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSERE 291
D GKSK FGFV+FE +DA KAV +NGK+ + ++ Y+G+AQKK E++
Sbjct: 180 DESGKSKGFGFVSFERHEDAQKAVNEMNGKELNGKQIYIGRAQKKVEQQ 228
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 139/240 (57%), Gaps = 15/240 (6%)
Query: 156 QSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKN 215
S G+ +V F+ + A+D +N +I K V + + Q ++ K++ +N+F+KN
Sbjct: 5 HSLGYTYVDFQKPTDMERALDTMNFDVIKGKPVRI---MWSQHDPSLH-KSEVSNIFIKN 60
Query: 216 LDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFD 275
L +S ++ L F +G I S V+ D +G SK +GFV+FE + +A+E ++G +
Sbjct: 61 LGKSIDNKALYDTFPAFGNILSCKVVCDENG-SKGYGFVHFETQEAVERAIEKMSGMLLN 119
Query: 276 DREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEF 335
D + +VG+ + + ERE EL + ++ N+YIKN G+ +DDE LK+LF +F
Sbjct: 120 DFKVFVGQFKSRKEREAELGARAKEFT----------NVYIKNFGEDMDDEHLKDLFGKF 169
Query: 336 GTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRA 395
G KVM D SG SKG GFV+F E+A +A+ EMNGK + K +Y+ AQ+K E++
Sbjct: 170 GPALRVKVMTDESGKSKGFGFVSFERHEDAQKAVNEMNGKELNGKQIYIGRAQKKVEQQT 229
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 102/182 (56%), Gaps = 8/182 (4%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+++++ +L ++ + LYD F G +LS +V D + S GYG+V++ RA+
Sbjct: 53 VSNIFIKNLGKSIDNKALYDTFPAFGNILSCKVVCDENG--SKGYGFVHFETQEAVERAI 110
Query: 89 DVLNFTPLNNKSIRI----MYSHRDPSI--RKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
+ ++ LN+ + + R+ + R N++IKN + +D + L D F FG
Sbjct: 111 EKMSGMLLNDFKVFVGQFKSRKEREAELGARAKEFTNVYIKNFGEDMDDEHLKDLFGKFG 170
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 202
L K+ TD SG+SKGFGFV FE E AQ A++++NG +N KQ+++G +K E++T
Sbjct: 171 PALRVKVMTDESGKSKGFGFVSFERHEDAQKAVNEMNGKELNGKQIYIGRAQKKVEQQTA 230
Query: 203 AI 204
I
Sbjct: 231 QI 232
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 60/97 (61%), Gaps = 1/97 (1%)
Query: 313 NLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEM 372
N++IKNLG SID++ L + F FG I SCKV+ D +G SKG GFV F T E RA+ +M
Sbjct: 55 NIFIKNLGKSIDNKALYDTFPAFGNILSCKVVCDENG-SKGYGFVHFETQEAVERAIEKM 113
Query: 373 NGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAM 409
+G ++ ++V + ++ER A L A+ + V +
Sbjct: 114 SGMLLNDFKVFVGQFKSRKEREAELGARAKEFTNVYI 150
>gi|198422109|ref|XP_002123332.1| PREDICTED: similar to poly A binding protein, cytoplasmic 1 b,
partial [Ciona intestinalis]
Length = 500
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 118/247 (47%), Positives = 174/247 (70%), Gaps = 17/247 (6%)
Query: 178 LNGMLINDKQVFVGHFLRKQER-----ETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEY 232
+NGML+NDK+VFVG FL + ER E V +F NV++KN + ++ L+ +F +Y
Sbjct: 1 VNGMLLNDKKVFVGKFLTRSERIKKMGERV---RQFTNVYIKNFGDKYDEKTLQVMFEKY 57
Query: 233 GTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDRE-----WYVGKAQKK 287
G + S VMRD DG S+ FGFV +++ ++A AVEA+NG++ + YVG+AQKK
Sbjct: 58 GVVKSVAVMRDRDGNSRGFGFVAYDSHEEAQAAVEAMNGQEIEGASGSTDILYVGRAQKK 117
Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRD- 346
ER+QEL+GQ+EQ +E + +FQG+NLY+KNL D++ D++L+E F+ +GTITS K+M D
Sbjct: 118 QERQQELRGQYEQQKQERIQRFQGVNLYVKNLDDNVTDDELREAFATYGTITSAKIMSDG 177
Query: 347 ---PSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQ 403
S+G GFV FS+PEEA++A+ EMNG+++ +KPLYVA+AQR+E+R+A L AQ+ Q
Sbjct: 178 ECSTGERSRGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRREDRKAHLTAQYMQ 237
Query: 404 MRPVAMG 410
+MG
Sbjct: 238 RMTSSMG 244
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/244 (32%), Positives = 131/244 (53%), Gaps = 29/244 (11%)
Query: 91 LNFTPLNNKSIRI-MYSHRDPSIRKSGT-----GNIFIKNLDKSIDHKALHDTFSSFGNI 144
+N LN+K + + + R I+K G N++IKN D K L F +G +
Sbjct: 1 VNGMLLNDKKVFVGKFLTRSERIKKMGERVRQFTNVYIKNFGDKYDEKTLQVMFEKYGVV 60
Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQ-----VFVGHFLRKQER 199
S + D G S+GFGFV +++ E AQ A++ +NG I ++VG +KQER
Sbjct: 61 KSVAVMRDRDGNSRGFGFVAYDSHEEAQAAVEAMNGQEIEGASGSTDILYVGRAQKKQER 120
Query: 200 ETVAIKTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDG 246
+ ++ ++ N++VKNLD++ TD++L++ F YGTITSA +M DG+
Sbjct: 121 QQ-ELRGQYEQQKQERIQRFQGVNLYVKNLDDNVTDDELREAFATYGTITSAKIMSDGEC 179
Query: 247 ----KSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAM 302
+S+ FGFV F + ++A KAV +NG+ + YV AQ++ +R+ L Q+ Q M
Sbjct: 180 STGERSRGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRREDRKAHLTAQYMQRM 239
Query: 303 KETV 306
++
Sbjct: 240 TSSM 243
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 61/75 (81%), Gaps = 2/75 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+T S+ LA+A P++Q+ +LGE LYPL+EQ D A+K+TGMLLE+D +E+LH+LES E
Sbjct: 388 PLT--SSMLASAQPQEQKQMLGERLYPLIEQSHPDLASKITGMLLEIDNSELLHMLESRE 445
Query: 555 ALKAKVAEAMEVLRS 569
+LKAKV EA+ VL++
Sbjct: 446 SLKAKVEEAVAVLQA 460
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 50/86 (58%), Gaps = 3/86 (3%)
Query: 26 QFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRD--LST-RRSLGYGYVNYANPA 82
+F +LYV +LD NVTD +L + F+ G + S ++ D ST RS G+G+V +++P
Sbjct: 138 RFQGVNLYVKNLDDNVTDDELREAFATYGTITSAKIMSDGECSTGERSRGFGFVCFSSPE 197
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHR 108
+A +A+ +N + K + + + R
Sbjct: 198 EATKAVTEMNGRIVGTKPLYVALAQR 223
>gi|340056243|emb|CCC50573.1| putative polyadenylate-binding protein 1 [Trypanosoma vivax Y486]
Length = 482
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 128/328 (39%), Positives = 196/328 (59%), Gaps = 34/328 (10%)
Query: 104 MYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFV 163
M+ RDP++R SG GNIF+KNL +D + L F FG ILSCK+ +D G+S+G+GFV
Sbjct: 1 MWQQRDPALRYSGNGNIFVKNLKGEVDSRELSVIFKRFGEILSCKVMSDEGGRSRGYGFV 60
Query: 164 QFENKESAQNAIDKLNGMLINDKQ--------VFVGHFLRKQERETVAIKTKFNNVFVKN 215
F++ +A+NAI+ +NG DK+ ++V +F+R+ R A+ F NV++K
Sbjct: 61 HFKDDTAAKNAIESMNG----DKEHADAAKAALYVANFIRRNAR-LAALVANFTNVYIKQ 115
Query: 216 LDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFD 275
L + + ++K F ++G ITSA +D +G++ F F NFE DDA KA+EA + + +
Sbjct: 116 LLPTVNKDTIEKFFSKFGGITSAATCKDKNGRA--FAFCNFEKHDDAVKAIEAFHDQVIE 173
Query: 276 D-----REWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKE 330
+ YV +AQ +SER L+ ++ Q G NLY++N ++ L
Sbjct: 174 GVTPPGEKLYVQRAQPRSERLIALRQKYMQCQS------LGNNLYVRNFDVEFSEKDLHV 227
Query: 331 LFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRK 390
LF E+GTI SC+VM D +G S+G GFV+F ++A+ AL EMNG+M+ KPL V +AQR+
Sbjct: 228 LFEEYGTIRSCRVMTDANGNSRGFGFVSFENADQANAALREMNGRMLNGKPLIVNIAQRR 287
Query: 391 EERRARLQAQFSQ--------MRPVAMG 410
++R L+ QF Q MRP+++G
Sbjct: 288 DQRFMMLRVQFQQRMQMMLRHMRPMSLG 315
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/318 (29%), Positives = 160/318 (50%), Gaps = 43/318 (13%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP--------- 81
+++V +L V +L +F + G++LS +V D RS GYG+V++ +
Sbjct: 16 NIFVKNLKGEVDSRELSVIFKRFGEILSCKVMSD-EGGRSRGYGFVHFKDDTAAKNAIES 74
Query: 82 -------ADAAR-ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKA 133
ADAA+ AL V NF N + ++ + N++IK L +++
Sbjct: 75 MNGDKEHADAAKAALYVANFIRRNARLAALV----------ANFTNVYIKQLLPTVNKDT 124
Query: 134 LHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLIN-----DKQV 188
+ FS FG I S D +G + F F FE + A AI+ + +I +++
Sbjct: 125 IEKFFSKFGGITSAATCKDKNG--RAFAFCNFEKHDDAVKAIEAFHDQVIEGVTPPGEKL 182
Query: 189 FVGHFLRKQERETVAIKTKF-------NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVM 241
+V + ER +A++ K+ NN++V+N D +++DL +F EYGTI S VM
Sbjct: 183 YVQRAQPRSER-LIALRQKYMQCQSLGNNLYVRNFDVEFSEKDLHVLFEEYGTIRSCRVM 241
Query: 242 RDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQA 301
D +G S+ FGFV+FENAD A A+ +NG+ + + V AQ++ +R L+ QF+Q
Sbjct: 242 TDANGNSRGFGFVSFENADQANAALREMNGRMLNGKPLIVNIAQRRDQRFMMLRVQFQQR 301
Query: 302 MKETVDKFQGLNLYIKNL 319
M+ + + ++L KN
Sbjct: 302 MQMMLRHMRPMSLGGKNF 319
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 90/185 (48%), Gaps = 18/185 (9%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
T++Y+ L V + FS+ G + S C+D + R + + N+ DA +A++
Sbjct: 109 TNVYIKQLLPTVNKDTIEKFFSKFGGITSAATCKDKNGR---AFAFCNFEKHDDAVKAIE 165
Query: 90 VLN------FTPLNNK---------SIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKAL 134
+ TP K S R++ + +S N++++N D K L
Sbjct: 166 AFHDQVIEGVTPPGEKLYVQRAQPRSERLIALRQKYMQCQSLGNNLYVRNFDVEFSEKDL 225
Query: 135 HDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFL 194
H F +G I SC++ TD +G S+GFGFV FEN + A A+ ++NG ++N K + V
Sbjct: 226 HVLFEEYGTIRSCRVMTDANGNSRGFGFVSFENADQANAALREMNGRMLNGKPLIVNIAQ 285
Query: 195 RKQER 199
R+ +R
Sbjct: 286 RRDQR 290
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 26 QFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAA 85
Q L +LYV + D ++ L+ LF + G + S RV D + S G+G+V++ N A
Sbjct: 205 QSLGNNLYVRNFDVEFSEKDLHVLFEEYGTIRSCRVMTD-ANGNSRGFGFVSFENADQAN 263
Query: 86 RALDVLNFTPLNNKSIRIMYSHR 108
AL +N LN K + + + R
Sbjct: 264 AALREMNGRMLNGKPLIVNIAQR 286
>gi|115520925|gb|ABJ08845.1| putative polyadenylate-binding protein 1 [Squalus acanthias]
Length = 212
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 120/213 (56%), Positives = 156/213 (73%), Gaps = 3/213 (1%)
Query: 88 LDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSC 147
LD +N + K +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FGNILSC
Sbjct: 1 LDTMNSDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSC 60
Query: 148 KIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET-VAIKT 206
K+ D +G SKG+GFV FE E+A+ AI+K+NGML+ND++VFVG F ++ERE + K
Sbjct: 61 KVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKA 119
Query: 207 K-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKA 265
K F NV++KN E DE LK+IF ++G S VM D G+SK FGFV+FE +DA KA
Sbjct: 120 KEFTNVYIKNFGEDMDDERLKEIFNKFGAFLSVKVMTDDSGRSKGFGFVSFEKHEDAQKA 179
Query: 266 VEALNGKKFDDREWYVGKAQKKSEREQELKGQF 298
V+ +NGK+ + R+ YVG K ER+ ELK +F
Sbjct: 180 VDEMNGKEINGRQVYVGPCPXKVERQTELKRKF 212
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 88/227 (38%), Positives = 134/227 (59%), Gaps = 15/227 (6%)
Query: 175 IDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGT 234
+D +N +I K V + +R+ K+ N+F+KNLD+S ++ L F +G
Sbjct: 1 LDTMNSDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGN 56
Query: 235 ITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQEL 294
I S V+ D +G SK +GFV+FE + A +A+E +NG +DR+ +VG+ + + ERE EL
Sbjct: 57 ILSCKVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 115
Query: 295 KGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGS 354
+ ++ N+YIKN G+ +DDE+LKE+F++FG S KVM D SG SKG
Sbjct: 116 GAKAKEFT----------NVYIKNFGEDMDDERLKEIFNKFGAFLSVKVMTDDSGRSKGF 165
Query: 355 GFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQF 401
GFV+F E+A +A+ EMNGK I + +YV K ER+ L+ +F
Sbjct: 166 GFVSFEKHEDAQKAVDEMNGKEINGRQVYVGPCPXKVERQTELKRKF 212
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 109/184 (59%), Gaps = 9/184 (4%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ +LD ++ + LYD FS G +LS +V D + S GYG+V++ A RA++
Sbjct: 32 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETHEAAERAIEK 89
Query: 91 LNFTPLNNKSIRI-MYSHRDPSIRKSGTG-----NIFIKNLDKSIDHKALHDTFSSFGNI 144
+N LN++ + + + R + G N++IKN + +D + L + F+ FG
Sbjct: 90 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEDMDDERLKEIFNKFGAF 149
Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAI 204
LS K+ TD SG+SKGFGFV FE E AQ A+D++NG IN +QV+VG K ER+T +
Sbjct: 150 LSVKVMTDDSGRSKGFGFVSFEKHEDAQKAVDEMNGKEINGRQVYVGPCPXKVERQT-EL 208
Query: 205 KTKF 208
K KF
Sbjct: 209 KRKF 212
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 62/97 (63%), Gaps = 1/97 (1%)
Query: 313 NLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEM 372
N++IKNL SID++ L + FS FG I SCKV+ D +G SKG GFV F T E A RA+ +M
Sbjct: 32 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETHEAAERAIEKM 90
Query: 373 NGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAM 409
NG ++ + ++V + ++ER A L A+ + V +
Sbjct: 91 NGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYI 127
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Query: 21 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYAN 80
GA +F T++Y+ + ++ D +L ++F++ G LSV+V D S RS G+G+V++
Sbjct: 116 GAKAKEF--TNVYIKNFGEDMDDERLKEIFNKFGAFLSVKVMTDDSG-RSKGFGFVSFEK 172
Query: 81 PADAARALDVLNFTPLNNKSIRI 103
DA +A+D +N +N + + +
Sbjct: 173 HEDAQKAVDEMNGKEINGRQVYV 195
>gi|326430719|gb|EGD76289.1| polyadenylate binding protein [Salpingoeca sp. ATCC 50818]
Length = 642
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 168/460 (36%), Positives = 227/460 (49%), Gaps = 84/460 (18%)
Query: 14 GPNGVAAGASGN-QFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLG 72
G GVA N Q SLYVGDL V +++L++LFS +G V+SVRVCRD TR SLG
Sbjct: 53 GAPGVAGPVPANPQGAAASLYVGDLSPQVNETELFNLFSSIGSVMSVRVCRDQITRSSLG 112
Query: 73 YGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHK 132
YGYVN+ DA A+ LNF L+ + IRIM RDP R+SG GNIFI L
Sbjct: 113 YGYVNFNKAEDAEAAMGQLNFHDLHGRHIRIMKVERDPKKRRSGVGNIFISGLPADTTSV 172
Query: 133 ALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLI-NDKQVFVG 191
L DTF FG ILSCK D SG+ +GFGFV FE+ + A+ AI + NG D+++ V
Sbjct: 173 HLRDTFEQFGKILSCKAVLDHSGRCRGFGFVHFEDPKVAERAIAEANGKDAGGDRKLRVA 232
Query: 192 HFL-RKQERETVAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVV----MRDGD 245
F RKQ + +TK F NV+VK+L +E+L K+F YG ITS + ++D +
Sbjct: 233 PFKPRKQREQEQEERTKNFTNVYVKSLRRGADEEELGKLFEPYGDITSKALRTYKLKDTE 292
Query: 246 GKSKCFGFVNFENADDAAKAVEA----------------LNGKKFDDREWYVGK-AQKKS 288
+ +GFVNF + + A K VE GKK +D V + A +
Sbjct: 293 ---RPYGFVNFADTEAAQKCVEEGEMHQRDIFYVDGMAFEEGKKVEDFVKTVEECAGSEV 349
Query: 289 EREQ------ELKG--QFEQAMKETVDK-FQGLNLYIKNLGDSIDDEKL----------- 328
ER +L G F++ +ETVDK GL ++ D I KL
Sbjct: 350 ERHHLQVADGKLSGFILFKEHGEETVDKAMTGLPEKMEAATDHISKAKLYVQRAQKKQER 409
Query: 329 ------------------------------------KELFSEFGTITSCKVMRDPSGISK 352
++ F E G + S KVMRD G+S+
Sbjct: 410 IRRLRRRLQERRRELRQRGGNLYVKNFNENVTEEDLRKFFEECGHVMSVKVMRDKEGVSR 469
Query: 353 GSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEE 392
GFV F+T EEA A+A+ N + + +P+YVA ++E
Sbjct: 470 CFGFVTFATREEAESAIAKKNRQPLQDRPIYVAFHLTRQE 509
>gi|392355792|ref|XP_228576.4| PREDICTED: polyadenylate-binding protein, cytoplasmic and
nuclear-like [Rattus norvegicus]
Length = 456
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 105/174 (60%), Positives = 133/174 (76%), Gaps = 1/174 (0%)
Query: 27 FLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAAR 86
F T SLYVGDL VT+S LY+ FS G +LS+R+CRD TRRSLGY YVNY P DA R
Sbjct: 255 FPTASLYVGDLHPEVTESMLYEKFSPAGPILSIRLCRDKVTRRSLGYAYVNYQQPVDAKR 314
Query: 87 ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
AL+ +NF +N + +RIM+S RDPS+RKSG GN+FIKNL K+ID+KAL++ FS+FGNILS
Sbjct: 315 ALETMNFDVINGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILS 374
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERE 200
CK+A D G KG+GFV F+ +ESA+ AID LNGM +N +++FVG F +ERE
Sbjct: 375 CKVACDEKG-PKGYGFVHFQKQESAERAIDALNGMFLNYRKIFVGRFKSHKERE 427
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 100/186 (53%), Gaps = 6/186 (3%)
Query: 117 TGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAI 175
T ++++ +L + L++ FS G ILS ++ D + +S G+ +V ++ A+ A+
Sbjct: 257 TASLYVGDLHPEVTESMLYEKFSPAGPILSIRLCRDKVTRRSLGYAYVNYQQPVDAKRAL 316
Query: 176 DKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTI 235
+ +N +IN + V + +R+ K+ NVF+KNL ++ ++ L IF +G I
Sbjct: 317 ETMNFDVINGRPVRIMW----SQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNI 372
Query: 236 TSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELK 295
S V D G K +GFV+F+ + A +A++ALNG + R+ +VG+ + ERE E
Sbjct: 373 LSCKVACDEKG-PKGYGFVHFQKQESAERAIDALNGMFLNYRKIFVGRFKSHKEREAERG 431
Query: 296 GQFEQA 301
Q+
Sbjct: 432 AWARQS 437
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 96/195 (49%), Gaps = 18/195 (9%)
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENADDAAKAVEA 268
+++V +L T+ L + F G I S + RD +S + +VN++ DA +A+E
Sbjct: 259 SLYVGDLHPEVTESMLYEKFSPAGPILSIRLCRDKVTRRSLGYAYVNYQQPVDAKRALET 318
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
+N + R + S+R+ L+ K V N++IKNLG +ID++ L
Sbjct: 319 MNFDVINGRPVRI----MWSQRDPSLR-------KSGVG-----NVFIKNLGKTIDNKAL 362
Query: 329 KELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
+FS FG I SCKV D G KG GFV F E A RA+ +NG + + ++V +
Sbjct: 363 YNIFSAFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAIDALNGMFLNYRKIFVGRFK 421
Query: 389 RKEERRARLQAQFSQ 403
+ER A A Q
Sbjct: 422 SHKEREAERGAWARQ 436
>gi|293351002|ref|XP_001054954.2| PREDICTED: polyadenylate-binding protein, cytoplasmic and
nuclear-like [Rattus norvegicus]
Length = 438
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 105/174 (60%), Positives = 133/174 (76%), Gaps = 1/174 (0%)
Query: 27 FLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAAR 86
F T SLYVGDL VT+S LY+ FS G +LS+R+CRD TRRSLGY YVNY P DA R
Sbjct: 237 FPTASLYVGDLHPEVTESMLYEKFSPAGPILSIRLCRDKVTRRSLGYAYVNYQQPVDAKR 296
Query: 87 ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
AL+ +NF +N + +RIM+S RDPS+RKSG GN+FIKNL K+ID+KAL++ FS+FGNILS
Sbjct: 297 ALETMNFDVINGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILS 356
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERE 200
CK+A D G KG+GFV F+ +ESA+ AID LNGM +N +++FVG F +ERE
Sbjct: 357 CKVACDEKG-PKGYGFVHFQKQESAERAIDALNGMFLNYRKIFVGRFKSHKERE 409
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 100/186 (53%), Gaps = 6/186 (3%)
Query: 117 TGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAI 175
T ++++ +L + L++ FS G ILS ++ D + +S G+ +V ++ A+ A+
Sbjct: 239 TASLYVGDLHPEVTESMLYEKFSPAGPILSIRLCRDKVTRRSLGYAYVNYQQPVDAKRAL 298
Query: 176 DKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTI 235
+ +N +IN + V + +R+ K+ NVF+KNL ++ ++ L IF +G I
Sbjct: 299 ETMNFDVINGRPVRI----MWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNI 354
Query: 236 TSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELK 295
S V D G K +GFV+F+ + A +A++ALNG + R+ +VG+ + ERE E
Sbjct: 355 LSCKVACDEKGP-KGYGFVHFQKQESAERAIDALNGMFLNYRKIFVGRFKSHKEREAERG 413
Query: 296 GQFEQA 301
Q+
Sbjct: 414 AWARQS 419
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 96/195 (49%), Gaps = 18/195 (9%)
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENADDAAKAVEA 268
+++V +L T+ L + F G I S + RD +S + +VN++ DA +A+E
Sbjct: 241 SLYVGDLHPEVTESMLYEKFSPAGPILSIRLCRDKVTRRSLGYAYVNYQQPVDAKRALET 300
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
+N + R + S+R+ L+ K V N++IKNLG +ID++ L
Sbjct: 301 MNFDVINGRPVRI----MWSQRDPSLR-------KSGVG-----NVFIKNLGKTIDNKAL 344
Query: 329 KELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
+FS FG I SCKV D G KG GFV F E A RA+ +NG + + ++V +
Sbjct: 345 YNIFSAFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAIDALNGMFLNYRKIFVGRFK 403
Query: 389 RKEERRARLQAQFSQ 403
+ER A A Q
Sbjct: 404 SHKEREAERGAWARQ 418
>gi|441675859|ref|XP_003280927.2| PREDICTED: uncharacterized protein LOC100588478 [Nomascus
leucogenys]
Length = 485
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 111/209 (53%), Positives = 146/209 (69%), Gaps = 4/209 (1%)
Query: 18 VAAGASGN-QFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYV 76
+ G GN F SLYVGDL VT++ LY+ FS G +LS+R+CRD TRRSLGY YV
Sbjct: 274 IRGGYEGNPDFPMASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYV 333
Query: 77 NYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHD 136
NY P DA RAL+ LNF + + +RIM+S RDPS+RKSG GN+FIKNL K+ID+KAL++
Sbjct: 334 NYQQPVDAKRALETLNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYN 393
Query: 137 TFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRK 196
FS+FGNILSCK+A D G KG+GFV F+ +ESA+ AID +NGM +N +++FVG F
Sbjct: 394 IFSAFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAIDVMNGMFLNYRKIFVGRFKSH 452
Query: 197 QERETV--AIKTKFNNVFVKNLDESTTDE 223
+ERE A + + VK+ +E T +E
Sbjct: 453 KEREAERGAWARQSTSADVKDFEEDTDEE 481
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 100/193 (51%), Gaps = 6/193 (3%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDK 177
++++ +L + L++ FS G ILS +I D + +S G+ +V ++ A+ A++
Sbjct: 288 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALET 347
Query: 178 LNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITS 237
LN +I + V + +R+ K+ NVF+KNL ++ ++ L IF +G I S
Sbjct: 348 LNFDVIKGRPVRIMW----SQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILS 403
Query: 238 AVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQ 297
V D G K +GFV+F+ + A +A++ +NG + R+ +VG+ + ERE E
Sbjct: 404 CKVACDEKG-PKGYGFVHFQKQESAERAIDVMNGMFLNYRKIFVGRFKSHKEREAERGAW 462
Query: 298 FEQAMKETVDKFQ 310
Q+ V F+
Sbjct: 463 ARQSTSADVKDFE 475
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 92/195 (47%), Gaps = 18/195 (9%)
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENADDAAKAVEA 268
+++V +L T+ L + F G I S + RD +S + +VN++ DA +A+E
Sbjct: 288 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALET 347
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
LN R + +Q+ + G N++IKNLG +ID++ L
Sbjct: 348 LNFDVIKGRPVRIMWSQRDPSLRKSGVG----------------NVFIKNLGKTIDNKAL 391
Query: 329 KELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
+FS FG I SCKV D G KG GFV F E A RA+ MNG + + ++V +
Sbjct: 392 YNIFSAFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAIDVMNGMFLNYRKIFVGRFK 450
Query: 389 RKEERRARLQAQFSQ 403
+ER A A Q
Sbjct: 451 SHKEREAERGAWARQ 465
>gi|344281908|ref|XP_003412718.1| PREDICTED: hypothetical protein LOC100663984 [Loxodonta africana]
Length = 640
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 109/197 (55%), Positives = 143/197 (72%), Gaps = 3/197 (1%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
T SLYVGDL VT++ LY+ FS G++LS+R+CRD TRRSLGY YVNY P DA RAL
Sbjct: 441 TASLYVGDLHPEVTEAMLYEKFSPAGRILSIRICRDKITRRSLGYAYVNYQQPVDAKRAL 500
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LNF + + +RIM+S RDPS+RKSG GN+FIKNL K+ID+KAL++ FS+FGNILSCK
Sbjct: 501 ETLNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSTFGNILSCK 560
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKT 206
+A D G KG+GFV F+ +ESA+ AID +NGM +N +++FVG F +ERE A
Sbjct: 561 VACDEKG-PKGYGFVHFQEQESAERAIDVMNGMFLNYRKIFVGRFKSHKEREAERGAWAR 619
Query: 207 KFNNVFVKNLDESTTDE 223
+ + VK+ DE T +E
Sbjct: 620 QSTSADVKDFDEDTDEE 636
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 106/209 (50%), Gaps = 11/209 (5%)
Query: 102 RIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGF 160
RI+ + DP T ++++ +L + L++ FS G ILS +I D + +S G+
Sbjct: 431 RIISASPDPP-----TASLYVGDLHPEVTEAMLYEKFSPAGRILSIRICRDKITRRSLGY 485
Query: 161 GFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDEST 220
+V ++ A+ A++ LN +I + V + +R+ K+ NVF+KNL ++
Sbjct: 486 AYVNYQQPVDAKRALETLNFDVIKGRPVRI----MWSQRDPSLRKSGVGNVFIKNLGKTI 541
Query: 221 TDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWY 280
++ L IF +G I S V D G K +GFV+F+ + A +A++ +NG + R+ +
Sbjct: 542 DNKALYNIFSTFGNILSCKVACDEKGP-KGYGFVHFQEQESAERAIDVMNGMFLNYRKIF 600
Query: 281 VGKAQKKSEREQELKGQFEQAMKETVDKF 309
VG+ + ERE E Q+ V F
Sbjct: 601 VGRFKSHKEREAERGAWARQSTSADVKDF 629
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 92/195 (47%), Gaps = 18/195 (9%)
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENADDAAKAVEA 268
+++V +L T+ L + F G I S + RD +S + +VN++ DA +A+E
Sbjct: 443 SLYVGDLHPEVTEAMLYEKFSPAGRILSIRICRDKITRRSLGYAYVNYQQPVDAKRALET 502
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
LN R + +Q+ + G N++IKNLG +ID++ L
Sbjct: 503 LNFDVIKGRPVRIMWSQRDPSLRKSGVG----------------NVFIKNLGKTIDNKAL 546
Query: 329 KELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
+FS FG I SCKV D G KG GFV F E A RA+ MNG + + ++V +
Sbjct: 547 YNIFSTFGNILSCKVACDEKG-PKGYGFVHFQEQESAERAIDVMNGMFLNYRKIFVGRFK 605
Query: 389 RKEERRARLQAQFSQ 403
+ER A A Q
Sbjct: 606 SHKEREAERGAWARQ 620
>gi|395754119|ref|XP_002831853.2| PREDICTED: uncharacterized protein LOC100437512 [Pongo abelii]
Length = 528
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 108/199 (54%), Positives = 142/199 (71%), Gaps = 3/199 (1%)
Query: 27 FLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAAR 86
F SLYVGDL VT++ LY+ FS G +LS+R+CRD TRRSLGY YVNY P DA R
Sbjct: 327 FPMASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKR 386
Query: 87 ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
AL+ LNF + + +RIM+S RDPS+RKSG GN+FIKNL K+ID+KAL++ FS+FGNILS
Sbjct: 387 ALETLNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILS 446
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AI 204
CK+A D G KG+GFV F+ +ESA+ AID +NGM +N +++FVG F +ERE A
Sbjct: 447 CKVACDEKG-PKGYGFVHFQKQESAERAIDVMNGMFLNYRKIFVGRFKSHKEREAERGAW 505
Query: 205 KTKFNNVFVKNLDESTTDE 223
+ + VK+ +E T +E
Sbjct: 506 ARQSTSADVKDFEEDTDEE 524
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 100/193 (51%), Gaps = 6/193 (3%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDK 177
++++ +L + L++ FS G ILS +I D + +S G+ +V ++ A+ A++
Sbjct: 331 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALET 390
Query: 178 LNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITS 237
LN +I + V + +R+ K+ NVF+KNL ++ ++ L IF +G I S
Sbjct: 391 LNFDVIKGRPVRIMW----SQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILS 446
Query: 238 AVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQ 297
V D G K +GFV+F+ + A +A++ +NG + R+ +VG+ + ERE E
Sbjct: 447 CKVACDEKGP-KGYGFVHFQKQESAERAIDVMNGMFLNYRKIFVGRFKSHKEREAERGAW 505
Query: 298 FEQAMKETVDKFQ 310
Q+ V F+
Sbjct: 506 ARQSTSADVKDFE 518
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 92/195 (47%), Gaps = 18/195 (9%)
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENADDAAKAVEA 268
+++V +L T+ L + F G I S + RD +S + +VN++ DA +A+E
Sbjct: 331 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALET 390
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
LN R + +Q+ + G N++IKNLG +ID++ L
Sbjct: 391 LNFDVIKGRPVRIMWSQRDPSLRKSGVG----------------NVFIKNLGKTIDNKAL 434
Query: 329 KELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
+FS FG I SCKV D G KG GFV F E A RA+ MNG + + ++V +
Sbjct: 435 YNIFSAFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAIDVMNGMFLNYRKIFVGRFK 493
Query: 389 RKEERRARLQAQFSQ 403
+ER A A Q
Sbjct: 494 SHKEREAERGAWARQ 508
>gi|426396432|ref|XP_004064447.1| PREDICTED: uncharacterized protein LOC101125114 [Gorilla gorilla
gorilla]
Length = 533
Score = 228 bits (582), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 108/199 (54%), Positives = 142/199 (71%), Gaps = 3/199 (1%)
Query: 27 FLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAAR 86
F SLYVGDL VT++ LY+ FS G +LS+R+CRD TRRSLGY YVNY P DA R
Sbjct: 332 FQMASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKR 391
Query: 87 ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
AL+ LNF + + +RIM+S RDPS+RKSG GN+FIKNL K+ID+KAL++ FS+FGNILS
Sbjct: 392 ALETLNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILS 451
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AI 204
CK+A D G KG+GFV F+ +ESA+ AID +NGM +N +++FVG F +ERE A
Sbjct: 452 CKVACDEKG-PKGYGFVHFQKQESAERAIDVMNGMFLNYRKIFVGRFKSHKEREAERGAW 510
Query: 205 KTKFNNVFVKNLDESTTDE 223
+ + VK+ +E T +E
Sbjct: 511 ARQSTSADVKDFEEDTDEE 529
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 100/193 (51%), Gaps = 6/193 (3%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDK 177
++++ +L + L++ FS G ILS +I D + +S G+ +V ++ A+ A++
Sbjct: 336 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALET 395
Query: 178 LNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITS 237
LN +I + V + +R+ K+ NVF+KNL ++ ++ L IF +G I S
Sbjct: 396 LNFDVIKGRPVRI----MWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILS 451
Query: 238 AVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQ 297
V D G K +GFV+F+ + A +A++ +NG + R+ +VG+ + ERE E
Sbjct: 452 CKVACDEKG-PKGYGFVHFQKQESAERAIDVMNGMFLNYRKIFVGRFKSHKEREAERGAW 510
Query: 298 FEQAMKETVDKFQ 310
Q+ V F+
Sbjct: 511 ARQSTSADVKDFE 523
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 95/195 (48%), Gaps = 18/195 (9%)
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENADDAAKAVEA 268
+++V +L T+ L + F G I S + RD +S + +VN++ DA +A+E
Sbjct: 336 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALET 395
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
LN R + S+R+ L+ K V N++IKNLG +ID++ L
Sbjct: 396 LNFDVIKGRPVRI----MWSQRDPSLR-------KSGVG-----NVFIKNLGKTIDNKAL 439
Query: 329 KELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
+FS FG I SCKV D G KG GFV F E A RA+ MNG + + ++V +
Sbjct: 440 YNIFSAFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAIDVMNGMFLNYRKIFVGRFK 498
Query: 389 RKEERRARLQAQFSQ 403
+ER A A Q
Sbjct: 499 SHKEREAERGAWARQ 513
>gi|344281910|ref|XP_003412719.1| PREDICTED: hypothetical protein LOC100664266 [Loxodonta africana]
Length = 708
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 102/173 (58%), Positives = 133/173 (76%), Gaps = 1/173 (0%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
T SLYVGDL VT++ LY+ FS G++LS+R+CRD TRRSLGY YVNY P DA RAL
Sbjct: 350 TASLYVGDLHPEVTEAMLYEKFSPAGRILSIRICRDKITRRSLGYAYVNYQQPVDAKRAL 409
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LNF + + +RIM+S RDPS+RKSG GN+FIKNL K+ID+KAL++ FS+FGNILSCK
Sbjct: 410 ETLNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSTFGNILSCK 469
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
+A D G KG+GFV F+ +ESA+ AID +NGM +N +++FVG F +ERE+
Sbjct: 470 VACDEKG-PKGYGFVHFQEQESAERAIDVMNGMFLNYRKIFVGRFKSHKERES 521
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 101/191 (52%), Gaps = 11/191 (5%)
Query: 102 RIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGF 160
RI+ + DP T ++++ +L + L++ FS G ILS +I D + +S G+
Sbjct: 340 RIISASPDPP-----TASLYVGDLHPEVTEAMLYEKFSPAGRILSIRICRDKITRRSLGY 394
Query: 161 GFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDEST 220
+V ++ A+ A++ LN +I + V + +R+ K+ NVF+KNL ++
Sbjct: 395 AYVNYQQPVDAKRALETLNFDVIKGRPVRI----MWSQRDPSLRKSGVGNVFIKNLGKTI 450
Query: 221 TDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWY 280
++ L IF +G I S V D G K +GFV+F+ + A +A++ +NG + R+ +
Sbjct: 451 DNKALYNIFSTFGNILSCKVACDEKGP-KGYGFVHFQEQESAERAIDVMNGMFLNYRKIF 509
Query: 281 VGKAQKKSERE 291
VG+ + ERE
Sbjct: 510 VGRFKSHKERE 520
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 94/193 (48%), Gaps = 18/193 (9%)
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENADDAAKAVEA 268
+++V +L T+ L + F G I S + RD +S + +VN++ DA +A+E
Sbjct: 352 SLYVGDLHPEVTEAMLYEKFSPAGRILSIRICRDKITRRSLGYAYVNYQQPVDAKRALET 411
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
LN R + S+R+ L+ K V N++IKNLG +ID++ L
Sbjct: 412 LNFDVIKGRPVRI----MWSQRDPSLR-------KSGVG-----NVFIKNLGKTIDNKAL 455
Query: 329 KELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
+FS FG I SCKV D G KG GFV F E A RA+ MNG + + ++V +
Sbjct: 456 YNIFSTFGNILSCKVACDEKG-PKGYGFVHFQEQESAERAIDVMNGMFLNYRKIFVGRFK 514
Query: 389 RKEERRARLQAQF 401
+ER + Q
Sbjct: 515 SHKERESWSDPQL 527
>gi|296470851|tpg|DAA12966.1| TPA: PABPC1L2B protein-like [Bos taurus]
Length = 489
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 108/199 (54%), Positives = 142/199 (71%), Gaps = 3/199 (1%)
Query: 27 FLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAAR 86
F SLYVGDL VT++ LY+ FS G +LS+R+CRD TRRSLGY YVNY P DA R
Sbjct: 288 FPMASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKR 347
Query: 87 ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
AL+ LNF + + +RIM+S RDPS+RKSG GN+FIKNL K+ID+KAL++ FS+FGNILS
Sbjct: 348 ALETLNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILS 407
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AI 204
CK+A D G KG+GFV F+ +ESA+ AID +NGM +N +++FVG F +ERE A
Sbjct: 408 CKVACDEKG-PKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFVGRFKSHKEREAERGAW 466
Query: 205 KTKFNNVFVKNLDESTTDE 223
+ + VK+ +E T +E
Sbjct: 467 ARQSTSADVKDFEEDTDEE 485
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 106/206 (51%), Gaps = 9/206 (4%)
Query: 106 SHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQ 164
S R+P+ ++++ +L + L++ FS G ILS +I D + +S G+ +V
Sbjct: 282 SERNPNF---PMASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVN 338
Query: 165 FENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDED 224
++ A+ A++ LN +I + V + +R+ K+ NVF+KNL ++ ++
Sbjct: 339 YQQPVDAKRALETLNFDVIKGRPVRI----MWSQRDPSLRKSGVGNVFIKNLGKTIDNKA 394
Query: 225 LKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKA 284
L IF +G I S V D G K +GFV+F+ + A +A++A+NG + R+ +VG+
Sbjct: 395 LYNIFSAFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFVGRF 453
Query: 285 QKKSEREQELKGQFEQAMKETVDKFQ 310
+ ERE E Q+ V F+
Sbjct: 454 KSHKEREAERGAWARQSTSADVKDFE 479
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 92/195 (47%), Gaps = 18/195 (9%)
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENADDAAKAVEA 268
+++V +L T+ L + F G I S + RD +S + +VN++ DA +A+E
Sbjct: 292 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALET 351
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
LN R + +Q+ + G N++IKNLG +ID++ L
Sbjct: 352 LNFDVIKGRPVRIMWSQRDPSLRKSGVG----------------NVFIKNLGKTIDNKAL 395
Query: 329 KELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
+FS FG I SCKV D G KG GFV F E A RA+ MNG + + ++V +
Sbjct: 396 YNIFSAFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFVGRFK 454
Query: 389 RKEERRARLQAQFSQ 403
+ER A A Q
Sbjct: 455 SHKEREAERGAWARQ 469
>gi|309271474|ref|XP_003085306.1| PREDICTED: polyadenylate-binding protein 1-like 2-like [Mus
musculus]
Length = 229
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 105/174 (60%), Positives = 133/174 (76%), Gaps = 1/174 (0%)
Query: 27 FLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAAR 86
F T SLYVGDL VT+S LY+ FS G +LS+R+CRD TRRSLGY YVNY P DA R
Sbjct: 28 FPTASLYVGDLHPEVTESMLYEKFSPAGPILSIRICRDKVTRRSLGYAYVNYQQPVDAKR 87
Query: 87 ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
AL+ +NF +N + +RIM+S RDPS+RKSG GN+FIKNL K+ID+KAL++ FS+FGNILS
Sbjct: 88 ALETMNFDVINGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILS 147
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERE 200
CK+A D G KG+GFV F+ +ESA+ AID LNGM +N +++FVG F +ERE
Sbjct: 148 CKVACDEKG-PKGYGFVHFQKQESAERAIDALNGMFLNYRKIFVGRFKSHKERE 200
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 98/178 (55%), Gaps = 6/178 (3%)
Query: 117 TGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAI 175
T ++++ +L + L++ FS G ILS +I D + +S G+ +V ++ A+ A+
Sbjct: 30 TASLYVGDLHPEVTESMLYEKFSPAGPILSIRICRDKVTRRSLGYAYVNYQQPVDAKRAL 89
Query: 176 DKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTI 235
+ +N +IN + V + +R+ K+ NVF+KNL ++ ++ L IF +G I
Sbjct: 90 ETMNFDVINGRPVRI----MWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNI 145
Query: 236 TSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQE 293
S V D G K +GFV+F+ + A +A++ALNG + R+ +VG+ + ERE E
Sbjct: 146 LSCKVACDEKG-PKGYGFVHFQKQESAERAIDALNGMFLNYRKIFVGRFKSHKEREAE 202
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 93/195 (47%), Gaps = 18/195 (9%)
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENADDAAKAVEA 268
+++V +L T+ L + F G I S + RD +S + +VN++ DA +A+E
Sbjct: 32 SLYVGDLHPEVTESMLYEKFSPAGPILSIRICRDKVTRRSLGYAYVNYQQPVDAKRALET 91
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
+N + R + +Q+ + G N++IKNLG +ID++ L
Sbjct: 92 MNFDVINGRPVRIMWSQRDPSLRKSGVG----------------NVFIKNLGKTIDNKAL 135
Query: 329 KELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
+FS FG I SCKV D G KG GFV F E A RA+ +NG + + ++V +
Sbjct: 136 YNIFSAFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAIDALNGMFLNYRKIFVGRFK 194
Query: 389 RKEERRARLQAQFSQ 403
+ER A A Q
Sbjct: 195 SHKEREAERGAWARQ 209
>gi|12836631|dbj|BAB23742.1| unnamed protein product [Mus musculus]
Length = 168
Score = 225 bits (573), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 105/166 (63%), Positives = 133/166 (80%), Gaps = 1/166 (0%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
S + SLYVGDL +VT++ LY+ FS G +LS+RVCRD+ TRRSLGY YVN+ PA
Sbjct: 4 SAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPA 63
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
DA RALD +NF + K +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FG
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFG 123
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQV 188
NILSCK+ D +G SKG+GFV FE +E+A+ AI+K+NGML+ND++V
Sbjct: 124 NILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKV 168
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 93/171 (54%), Gaps = 6/171 (3%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFEN 167
+PS ++++ +L + L++ FS G ILS ++ D + +S G+ +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
A+ A+D +N +I K V + +R+ K+ N+F+KNLD+S ++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRI----MWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYD 117
Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDRE 278
F +G I S V+ D +G SK +GFV+FE + A +A+E +NG +DR+
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRK 167
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 86/169 (50%), Gaps = 18/169 (10%)
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENADDAAKAVEA 268
+++V +L T+ L + F G I S V RD +S + +VNF+ DA +A++
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
+N + + +Q+ + G N++IKNL SID++ L
Sbjct: 72 MNFDVIKGKPVRIMWSQRDPSLRKSGVG----------------NIFIKNLDKSIDNKAL 115
Query: 329 KELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMI 377
+ FS FG I SCKV+ D +G SKG GFV F T E A RA+ +MNG ++
Sbjct: 116 YDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLL 163
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 313 NLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRD-PSGISKGSGFVAFSTPEEASRALAE 371
+LY+ +L + + L E FS G I S +V RD + S G +V F P +A RAL
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 372 MNGKMIVSKPLYVAVAQRKEERR 394
MN +I KP+ + +QR R
Sbjct: 72 MNFDVIKGKPVRIMWSQRDPSLR 94
>gi|297304162|ref|XP_002806331.1| PREDICTED: polyadenylate-binding protein 1-like 2-like, partial
[Macaca mulatta]
Length = 249
Score = 225 bits (573), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 111/207 (53%), Positives = 145/207 (70%), Gaps = 4/207 (1%)
Query: 20 AGASGN-QFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNY 78
G GN F SLYVGDL VT++ LY+ FS G +LS+R+CRD TRRSLGY YVNY
Sbjct: 40 GGCEGNPDFPMASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNY 99
Query: 79 ANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTF 138
P DA RAL+ LNF + + +RIM+S RDPS+RKSG GN+FIKNL K+ID+KAL++ F
Sbjct: 100 QQPVDAKRALETLNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIF 159
Query: 139 SSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQE 198
S+FGNILSCK+A D G KG+GFV F+ +ESA+ AID +NGM +N +++FVG F +E
Sbjct: 160 SAFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAIDVMNGMFLNYRKIFVGRFKSHKE 218
Query: 199 RETV--AIKTKFNNVFVKNLDESTTDE 223
RE A + + VK+ +E T +E
Sbjct: 219 REAERGAWARQSTSADVKDFEEDTDEE 245
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 100/193 (51%), Gaps = 6/193 (3%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDK 177
++++ +L + L++ FS G ILS +I D + +S G+ +V ++ A+ A++
Sbjct: 52 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALET 111
Query: 178 LNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITS 237
LN +I + V + +R+ K+ NVF+KNL ++ ++ L IF +G I S
Sbjct: 112 LNFDVIKGRPVRI----MWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILS 167
Query: 238 AVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQ 297
V D G K +GFV+F+ + A +A++ +NG + R+ +VG+ + ERE E
Sbjct: 168 CKVACDEKG-PKGYGFVHFQKQESAERAIDVMNGMFLNYRKIFVGRFKSHKEREAERGAW 226
Query: 298 FEQAMKETVDKFQ 310
Q+ V F+
Sbjct: 227 ARQSTSADVKDFE 239
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 92/195 (47%), Gaps = 18/195 (9%)
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENADDAAKAVEA 268
+++V +L T+ L + F G I S + RD +S + +VN++ DA +A+E
Sbjct: 52 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALET 111
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
LN R + +Q+ + G N++IKNLG +ID++ L
Sbjct: 112 LNFDVIKGRPVRIMWSQRDPSLRKSGVG----------------NVFIKNLGKTIDNKAL 155
Query: 329 KELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
+FS FG I SCKV D G KG GFV F E A RA+ MNG + + ++V +
Sbjct: 156 YNIFSAFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAIDVMNGMFLNYRKIFVGRFK 214
Query: 389 RKEERRARLQAQFSQ 403
+ER A A Q
Sbjct: 215 SHKEREAERGAWARQ 229
>gi|397508069|ref|XP_003824497.1| PREDICTED: polyadenylate-binding protein 1-like 2-like, partial
[Pan paniscus]
Length = 293
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 108/199 (54%), Positives = 142/199 (71%), Gaps = 3/199 (1%)
Query: 27 FLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAAR 86
F SLYVGDL VT++ LY+ FS G +LS+R+CRD TRRSLGY YVNY P DA R
Sbjct: 92 FQMASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKR 151
Query: 87 ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
AL+ LNF + + +RIM+S RDPS+RKSG GN+FIKNL K+ID+KAL++ FS+FGNILS
Sbjct: 152 ALETLNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILS 211
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AI 204
CK+A D G KG+GFV F+ +ESA+ AID +NGM +N +++FVG F +ERE A
Sbjct: 212 CKVACDEKG-PKGYGFVHFQKQESAERAIDVMNGMFLNYRKIFVGRFKSHKEREAERGAW 270
Query: 205 KTKFNNVFVKNLDESTTDE 223
+ + VK+ +E T +E
Sbjct: 271 ARQSTSADVKDFEEDTDEE 289
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 100/193 (51%), Gaps = 6/193 (3%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDK 177
++++ +L + L++ FS G ILS +I D + +S G+ +V ++ A+ A++
Sbjct: 96 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALET 155
Query: 178 LNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITS 237
LN +I + V + +R+ K+ NVF+KNL ++ ++ L IF +G I S
Sbjct: 156 LNFDVIKGRPVRIMW----SQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILS 211
Query: 238 AVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQ 297
V D G K +GFV+F+ + A +A++ +NG + R+ +VG+ + ERE E
Sbjct: 212 CKVACDEKG-PKGYGFVHFQKQESAERAIDVMNGMFLNYRKIFVGRFKSHKEREAERGAW 270
Query: 298 FEQAMKETVDKFQ 310
Q+ V F+
Sbjct: 271 ARQSTSADVKDFE 283
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 92/195 (47%), Gaps = 18/195 (9%)
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENADDAAKAVEA 268
+++V +L T+ L + F G I S + RD +S + +VN++ DA +A+E
Sbjct: 96 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALET 155
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
LN R + +Q+ + G N++IKNLG +ID++ L
Sbjct: 156 LNFDVIKGRPVRIMWSQRDPSLRKSGVG----------------NVFIKNLGKTIDNKAL 199
Query: 329 KELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
+FS FG I SCKV D G KG GFV F E A RA+ MNG + + ++V +
Sbjct: 200 YNIFSAFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAIDVMNGMFLNYRKIFVGRFK 258
Query: 389 RKEERRARLQAQFSQ 403
+ER A A Q
Sbjct: 259 SHKEREAERGAWARQ 273
>gi|47229361|emb|CAF99349.1| unnamed protein product [Tetraodon nigroviridis]
Length = 380
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 156/390 (40%), Positives = 214/390 (54%), Gaps = 66/390 (16%)
Query: 241 MRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQ 300
M D GKS+ FGFV+FE +DA KA NG F W QKK ER+ ELK +FEQ
Sbjct: 1 MTDDSGKSRGFGFVSFERHEDAQKAD---NG--FLKENWI----QKKVERQAELKRKFEQ 51
Query: 301 AMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFS 360
++ + ++QG+NLY+KNL D IDDE+L++ FS FGTITS KVM + G SKG GFV FS
Sbjct: 52 MKQDRMTRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMLE-GGRSKGFGFVCFS 110
Query: 361 TPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQ----MRPVAMGPSVPPR 416
+PEEA++A+ EMNG+++ +KPLYVA+AQRKEER+A L Q+ Q +R V P + P
Sbjct: 111 SPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMASVRAVP-NPVINPY 169
Query: 417 MPMYPPG------PSGLGQQFLY---GQAPPAIIPPQMPPRGHAYRYPLGRNMQ-----D 462
P P G P + Y GQ P+ P +G R +NMQ
Sbjct: 170 QPAPPSGYFMTAIPQTQNRGAYYPAAGQMAQLRPSPRWPTQG--VRPQHFQNMQSAMRSS 227
Query: 463 FPFDMGAGSMLP----------------------------VPVDMGAGIPRRDASVGQPM 494
P GSM P V + G+ + + G
Sbjct: 228 APRPQMFGSMRPSSQLPRMTSSQRVATQAMGPRAATTAPSVTANPVRGVSQYKYATGGQE 287
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+T ++ LA A +Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 288 PLT--TSMLAAAPLHEQKQMLGERLFPLIQAMHLSLAGKITGMLLEIDNSELLHMLESPE 345
Query: 555 ALKAKVAEAMEVL-----RSVAQQQANNPA 579
+L++KV EA+ VL + AQ+ N A
Sbjct: 346 SLRSKVDEAVAVLQAHQAKEAAQKSVTNSA 375
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/158 (44%), Positives = 91/158 (57%), Gaps = 10/158 (6%)
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGML----INDKQVFVGHFLRKQERETVAIKT 206
TD SG+S+GFGFV FE E AQ A NG L I K RK E+ T
Sbjct: 2 TDDSGKSRGFGFVSFERHEDAQKAD---NGFLKENWIQKKVERQAELKRKFEQMKQDRMT 58
Query: 207 KFN--NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAK 264
++ N++VKNLD+ DE L+K F +GTITSA VM +G G+SK FGFV F + ++A K
Sbjct: 59 RYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMLEG-GRSKGFGFVCFSSPEEATK 117
Query: 265 AVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAM 302
AV +NG+ + YV AQ+K ER+ L Q+ Q M
Sbjct: 118 AVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRM 155
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 75/140 (53%), Gaps = 10/140 (7%)
Query: 69 RSLGYGYVNYANPADAARALD-VLNFTPLNNKSIRIMYSHR-------DPSIRKSGTGNI 120
+S G+G+V++ DA +A + L + K R R D R G N+
Sbjct: 7 KSRGFGFVSFERHEDAQKADNGFLKENWIQKKVERQAELKRKFEQMKQDRMTRYQGV-NL 65
Query: 121 FIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNG 180
++KNLD ID + L FS FG I S K+ +G G+SKGFGFV F + E A A+ ++NG
Sbjct: 66 YVKNLDDGIDDERLRKEFSPFGTITSAKVMLEG-GRSKGFGFVCFSSPEEATKAVTEMNG 124
Query: 181 MLINDKQVFVGHFLRKQERE 200
++ K ++V RK+ER+
Sbjct: 125 RIVATKPLYVALAQRKEERQ 144
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 53/101 (52%), Gaps = 3/101 (2%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
++ +LYV +LD + D +L FS G + S +V L RS G+G+V +++P +A
Sbjct: 58 TRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVM--LEGGRSKGFGFVCFSSPEEA 115
Query: 85 ARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNL 125
+A+ +N + K + + + R R++ N +++ +
Sbjct: 116 TKAVTEMNGRIVATKPLYVALAQRKEE-RQAHLTNQYMQRM 155
>gi|395863403|ref|XP_003803885.1| PREDICTED: polyadenylate-binding protein 1-like 2-like, partial
[Otolemur garnettii]
Length = 203
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 108/199 (54%), Positives = 142/199 (71%), Gaps = 3/199 (1%)
Query: 27 FLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAAR 86
F SLYVGDL VT++ LY+ FS G +LS+R+CRD TRRSLGY YVNY P DA R
Sbjct: 2 FPMASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKR 61
Query: 87 ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
AL+ LNF + + +RIM+S RDPS+RKSG GN+FIKNL K+ID+KAL++ FS+FGNILS
Sbjct: 62 ALETLNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILS 121
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AI 204
CK+A D G KG+GFV F+ +ESA+ AID +NGM +N +++FVG F +ERE A
Sbjct: 122 CKVACDEKG-PKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFVGRFKSHKEREAERGAW 180
Query: 205 KTKFNNVFVKNLDESTTDE 223
+ + VK+ +E T +E
Sbjct: 181 ARQSTSADVKDFEEDTDEE 199
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 101/194 (52%), Gaps = 6/194 (3%)
Query: 118 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAID 176
++++ +L + L++ FS G ILS +I D + +S G+ +V ++ A+ A++
Sbjct: 5 ASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALE 64
Query: 177 KLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTIT 236
LN +I + V + +R+ K+ NVF+KNL ++ ++ L IF +G I
Sbjct: 65 TLNFDVIKGRPVRIMW----SQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNIL 120
Query: 237 SAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKG 296
S V D G K +GFV+F+ + A +A++A+NG + R+ +VG+ + ERE E
Sbjct: 121 SCKVACDEKG-PKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFVGRFKSHKEREAERGA 179
Query: 297 QFEQAMKETVDKFQ 310
Q+ V F+
Sbjct: 180 WARQSTSADVKDFE 193
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 92/195 (47%), Gaps = 18/195 (9%)
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENADDAAKAVEA 268
+++V +L T+ L + F G I S + RD +S + +VN++ DA +A+E
Sbjct: 6 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALET 65
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
LN R + +Q+ + G N++IKNLG +ID++ L
Sbjct: 66 LNFDVIKGRPVRIMWSQRDPSLRKSGVG----------------NVFIKNLGKTIDNKAL 109
Query: 329 KELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
+FS FG I SCKV D G KG GFV F E A RA+ MNG + + ++V +
Sbjct: 110 YNIFSAFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFVGRFK 168
Query: 389 RKEERRARLQAQFSQ 403
+ER A A Q
Sbjct: 169 SHKEREAERGAWARQ 183
>gi|1262583|dbj|BAA02244.1| polyadenylate binding protein II [Homo sapiens]
Length = 193
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 110/190 (57%), Positives = 146/190 (76%), Gaps = 1/190 (0%)
Query: 208 FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVE 267
F NV++KN E DE LK++F ++G S VMRD +GKSK FGFV++E +DA KAVE
Sbjct: 1 FTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVE 60
Query: 268 ALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEK 327
+NGK+ + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL D+IDDEK
Sbjct: 61 EMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 120
Query: 328 LKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 387
L++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ SKPLYVA+A
Sbjct: 121 LRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 179
Query: 388 QRKEERRARL 397
QRKEER+A L
Sbjct: 180 QRKEERKAHL 189
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 117/189 (61%), Gaps = 15/189 (7%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKL 178
N++IKN + +D ++L + FS FG LS K+ D +G+SKGFGFV +E E A A++++
Sbjct: 3 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEM 62
Query: 179 NGMLINDKQVFVGHFLRKQERETVAIKTKFN-------------NVFVKNLDESTTDEDL 225
NG I+ K +FVG +K ER+ +K KF N+++KNLD++ DE L
Sbjct: 63 NGKEISGKIIFVGRAQKKVERQA-ELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKL 121
Query: 226 KKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQ 285
+K F +G+ITSA VM + DG+SK FGFV F + ++A KAV +NG+ + YV AQ
Sbjct: 122 RKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 180
Query: 286 KKSEREQEL 294
+K ER+ L
Sbjct: 181 RKEERKAHL 189
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 70/93 (75%)
Query: 313 NLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEM 372
N+YIKN G+ +DDE LKELFS+FG S KVMRDP+G SKG GFV++ E+A++A+ EM
Sbjct: 3 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEM 62
Query: 373 NGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
NGK I K ++V AQ+K ER+A L+ +F Q++
Sbjct: 63 NGKEISGKIIFVGRAQKKVERQAELKRKFEQLK 95
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 103/187 (55%), Gaps = 18/187 (9%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
T++Y+ + V D L +LFSQ G+ LSV+V RD + +S G+G+V+Y DA +A++
Sbjct: 2 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNG-KSKGFGFVSYEKHEDANKAVE 60
Query: 90 VLNFTPLNNKSI----------------RIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKA 133
+N ++ K I R + I + N++IKNLD +ID +
Sbjct: 61 EMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 120
Query: 134 LHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHF 193
L FS FG+I S K+ + G+SKGFGFV F + E A A+ ++NG ++ K ++V
Sbjct: 121 LRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 179
Query: 194 LRKQERE 200
RK+ER+
Sbjct: 180 QRKEERK 186
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 56/107 (52%), Gaps = 2/107 (1%)
Query: 2 AQIQVQHQAQMSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRV 61
AQ +V+ QA++ +++ +LY+ +LD + D +L FS G + S +V
Sbjct: 77 AQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKV 136
Query: 62 CRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHR 108
L RS G+G+V +++P +A +A+ +N + +K + + + R
Sbjct: 137 M--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 181
>gi|399950033|gb|AFP65689.1| polyadenylate-binding protein [Chroomonas mesostigmatica CCMP1168]
Length = 490
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 127/317 (40%), Positives = 191/317 (60%), Gaps = 15/317 (4%)
Query: 14 GPNGVAAGASGNQ-FLT--------TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRD 64
GP G S N+ FL SLYVGDL V +S L +FS++G+V S+++CRD
Sbjct: 10 GPKLKLIGDSSNKKFLKRKIKIKNPCSLYVGDLSIYVEESSLMKIFSKIGKVHSIQICRD 69
Query: 65 LSTRRSLGYGYVNYANPADAARALDVLNFTP---LNNKSIRIMYSHRDPSIRKSGTGNIF 121
ST S GY YVN+ NP DA +A +LN+ L+ K +RIM+ +D S+R SGTGN+F
Sbjct: 70 FSTGISRGYSYVNFLNPKDAQKAFKLLNYYTDETLHYKPLRIMWVQKDKSLRFSGTGNLF 129
Query: 122 IKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGM 181
IKN+ + D+K+L FS FG ILSCKIA D + +S G+GFV ++ ++ ++ AI+K+N
Sbjct: 130 IKNIPRRYDNKSLSKLFSQFGKILSCKIALDENKRSMGYGFVHYKEEKDSKKAIEKMNNC 189
Query: 182 LINDKQVFVGHFLRKQERETV-AIKTKFNNVFVKN-LDESTTDEDLKKIFGEYGTITSAV 239
I+ +++FVG F+ K +R K +F NV++KN L ++ + +K +F +G ITS
Sbjct: 190 FIDGEKIFVGPFISKVKRNNRNNSKLRFTNVYIKNILFQNCNEIYIKDLFEIFGPITSIF 249
Query: 240 VMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFE 299
+ + + F FVNFEN +DA A+ +NGKK + YVGKA+ + ER++ L +F
Sbjct: 250 IPKANEAPLG-FAFVNFENPEDAEDAIFKMNGKKIKGKTLYVGKAETRIERQRRLAKKFL 308
Query: 300 QAMKETVDKFQGLNLYI 316
V ++ L +I
Sbjct: 309 DKKMSKVCFYKKLMFFI 325
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 142/292 (48%), Gaps = 15/292 (5%)
Query: 112 IRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGS-GQSKGFGFVQFENKES 170
I+ ++++ +L ++ +L FS G + S +I D S G S+G+ +V F N +
Sbjct: 29 IKIKNPCSLYVGDLSIYVEESSLMKIFSKIGKVHSIQICRDFSTGISRGYSYVNFLNPKD 88
Query: 171 AQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFG 230
AQ A LN + Q+ +++ N+F+KN+ ++ L K+F
Sbjct: 89 AQKAFKLLNYYTDETLHYKPLRIMWVQKDKSLRFSGT-GNLFIKNIPRRYDNKSLSKLFS 147
Query: 231 EYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSER 290
++G I S + D + +S +GFV+++ D+ KA+E +N D + +VG K +R
Sbjct: 148 QFGKILSCKIALDENKRSMGYGFVHYKEEKDSKKAIEKMNNCFIDGEKIFVGPFISKVKR 207
Query: 291 EQELKGQFEQAMKETVDKFQGLNLYIKN-LGDSIDDEKLKELFSEFGTITSCKVMRDPSG 349
K + N+YIKN L + ++ +K+LF FG ITS + +
Sbjct: 208 NNR-----------NNSKLRFTNVYIKNILFQNCNEIYIKDLFEIFGPITSIFIPKANEA 256
Query: 350 ISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQF 401
G FV F PE+A A+ +MNGK I K LYV A+ + ER+ RL +F
Sbjct: 257 -PLGFAFVNFENPEDAEDAIFKMNGKKIKGKTLYVGKAETRIERQRRLAKKF 307
>gi|291407697|ref|XP_002720156.1| PREDICTED: polyadenylate-binding protein 1-like [Oryctolagus
cuniculus]
gi|301792853|ref|XP_002931393.1| PREDICTED: polyadenylate-binding protein 1-like 2-like [Ailuropoda
melanoleuca]
gi|311276495|ref|XP_003135232.1| PREDICTED: polyadenylate-binding protein 1-like 2-like [Sus scrofa]
gi|335306198|ref|XP_003360416.1| PREDICTED: polyadenylate-binding protein 1-like 2-like [Sus scrofa]
gi|281338845|gb|EFB14429.1| hypothetical protein PANDA_022442 [Ailuropoda melanoleuca]
Length = 200
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 107/195 (54%), Positives = 141/195 (72%), Gaps = 3/195 (1%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL VT++ LY+ FS G +LS+R+CRD TRRSLGY YVNY P DA RAL+
Sbjct: 3 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALET 62
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
LNF + + +RIM+S RDPS+RKSG GN+FIKNL K+ID+KAL++ FS+FGNILSCK+A
Sbjct: 63 LNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCKVA 122
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTKF 208
D G KG+GFV F+ +ESA+ AID +NGM +N +++FVG F +ERE A +
Sbjct: 123 CDEKG-PKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFVGRFKSHKEREAERGAWARQS 181
Query: 209 NNVFVKNLDESTTDE 223
+ VK+ +E T +E
Sbjct: 182 TSADVKDFEEDTDEE 196
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 101/194 (52%), Gaps = 6/194 (3%)
Query: 118 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAID 176
++++ +L + L++ FS G ILS +I D + +S G+ +V ++ A+ A++
Sbjct: 2 ASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALE 61
Query: 177 KLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTIT 236
LN +I + V + +R+ K+ NVF+KNL ++ ++ L IF +G I
Sbjct: 62 TLNFDVIKGRPVRIMW----SQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNIL 117
Query: 237 SAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKG 296
S V D G K +GFV+F+ + A +A++A+NG + R+ +VG+ + ERE E
Sbjct: 118 SCKVACDEKG-PKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFVGRFKSHKEREAERGA 176
Query: 297 QFEQAMKETVDKFQ 310
Q+ V F+
Sbjct: 177 WARQSTSADVKDFE 190
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 92/195 (47%), Gaps = 18/195 (9%)
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENADDAAKAVEA 268
+++V +L T+ L + F G I S + RD +S + +VN++ DA +A+E
Sbjct: 3 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALET 62
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
LN R + +Q+ + G N++IKNLG +ID++ L
Sbjct: 63 LNFDVIKGRPVRIMWSQRDPSLRKSGVG----------------NVFIKNLGKTIDNKAL 106
Query: 329 KELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
+FS FG I SCKV D G KG GFV F E A RA+ MNG + + ++V +
Sbjct: 107 YNIFSAFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFVGRFK 165
Query: 389 RKEERRARLQAQFSQ 403
+ER A A Q
Sbjct: 166 SHKEREAERGAWARQ 180
>gi|359081870|ref|XP_003588203.1| PREDICTED: poly(A) binding protein, cytoplasmic 1-like 2A [Bos
taurus]
gi|395862938|ref|XP_003803673.1| PREDICTED: polyadenylate-binding protein 1-like 2-like [Otolemur
garnettii]
Length = 200
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 107/195 (54%), Positives = 141/195 (72%), Gaps = 3/195 (1%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL VT++ LY+ FS G +LS+R+CRD TRRSLGY YVNY P DA RAL+
Sbjct: 3 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALET 62
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
LNF + + +RIM+S RDPS+RKSG GN+FIKNL K+ID+KAL++ FS+FGNILSCK+A
Sbjct: 63 LNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCKVA 122
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTKF 208
D G KG+GFV F+ +ESA+ AID +NGM +N +++FVG F +ERE A +
Sbjct: 123 CDEKG-PKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFVGRFKSHKEREAERGAWARQS 181
Query: 209 NNVFVKNLDESTTDE 223
+ VK+ +E T +E
Sbjct: 182 TSADVKDFEEDTDEE 196
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 101/194 (52%), Gaps = 6/194 (3%)
Query: 118 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAID 176
++++ +L + L++ FS G ILS +I D + +S G+ +V ++ A+ A++
Sbjct: 2 ASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALE 61
Query: 177 KLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTIT 236
LN +I + V + +R+ K+ NVF+KNL ++ ++ L IF +G I
Sbjct: 62 TLNFDVIKGRPVRIMW----SQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNIL 117
Query: 237 SAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKG 296
S V D G K +GFV+F+ + A +A++A+NG + R+ +VG+ + ERE E
Sbjct: 118 SCKVACDEKG-PKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFVGRFKSHKEREAERGA 176
Query: 297 QFEQAMKETVDKFQ 310
Q+ V F+
Sbjct: 177 WARQSTSADVKDFE 190
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 92/195 (47%), Gaps = 18/195 (9%)
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENADDAAKAVEA 268
+++V +L T+ L + F G I S + RD +S + +VN++ DA +A+E
Sbjct: 3 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALET 62
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
LN R + +Q+ + G N++IKNLG +ID++ L
Sbjct: 63 LNFDVIKGRPVRIMWSQRDPSLRKSGVG----------------NVFIKNLGKTIDNKAL 106
Query: 329 KELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
+FS FG I SCKV D G KG GFV F E A RA+ MNG + + ++V +
Sbjct: 107 YNIFSAFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFVGRFK 165
Query: 389 RKEERRARLQAQFSQ 403
+ER A A Q
Sbjct: 166 SHKEREAERGAWARQ 180
>gi|119627672|gb|EAX07267.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_g [Homo sapiens]
Length = 338
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 104/179 (58%), Positives = 135/179 (75%), Gaps = 1/179 (0%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+ + + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
ADA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+F
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERE 200
GNILSCK+ + G+SKGFGFV F + E A A+ ++NG ++ K ++V RK+ER+
Sbjct: 123 GNILSCKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERK 180
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/197 (41%), Positives = 118/197 (59%), Gaps = 22/197 (11%)
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENADDAAKAVEA 268
+++V +L T+ L + F G + S V RD +S + +VNF+ DA +A++
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 269 LNGKKFDDREWYVGKAQK--KSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
+N FD + GK + S+R+ L+ K V N++IKNL SID++
Sbjct: 72 MN---FDVIK---GKPIRIMWSQRDPSLR-------KSGVG-----NVFIKNLDKSIDNK 113
Query: 327 KLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 386
L + FS FG I SCKVM + G SKG GFV FS+PEEA++A+ EMNG+++ SKPLYVA+
Sbjct: 114 ALYDTFSAFGNILSCKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVAL 172
Query: 387 AQRKEERRARLQAQFSQ 403
AQRKEER+A L Q+ Q
Sbjct: 173 AQRKEERKAHLTNQYMQ 189
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 101/183 (55%), Gaps = 6/183 (3%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDK 177
++++ +L + L++ FS G +LS ++ D + +S G+ +V F+ A+ A+D
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 178 LNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITS 237
+N +I K + + +R+ K+ NVF+KNLD+S ++ L F +G I S
Sbjct: 72 MNFDVIKGKPIRI----MWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 238 AVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQ 297
VM + DG+SK FGFV F + ++A KAV +NG+ + YV AQ+K ER+ L Q
Sbjct: 128 CKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAHLTNQ 186
Query: 298 FEQ 300
+ Q
Sbjct: 187 YMQ 189
>gi|61175237|ref|NP_001012995.1| polyadenylate-binding protein 1-like 2 [Homo sapiens]
gi|109948285|ref|NP_001035971.1| polyadenylate-binding protein 1-like 2 [Homo sapiens]
gi|402910552|ref|XP_003917938.1| PREDICTED: polyadenylate-binding protein 1-like 2 [Papio anubis]
gi|426396426|ref|XP_004064444.1| PREDICTED: polyadenylate-binding protein 1-like 2 [Gorilla gorilla
gorilla]
gi|74755614|sp|Q5JQF8.1|PAP1M_HUMAN RecName: Full=Polyadenylate-binding protein 1-like 2; AltName:
Full=RNA-binding motif protein 32; AltName:
Full=RNA-binding protein 32
gi|119619077|gb|EAW98671.1| hCG1811470 [Homo sapiens]
gi|187951483|gb|AAI36493.1| PABPC1L2A protein [Homo sapiens]
gi|261861056|dbj|BAI47050.1| poly(A) binding protein, cytoplasmic 1-like 2A [synthetic
construct]
gi|355704922|gb|EHH30847.1| RNA-binding protein 32 [Macaca mulatta]
gi|355767263|gb|EHH62597.1| RNA-binding protein 32 [Macaca fascicularis]
gi|380784435|gb|AFE64093.1| polyadenylate-binding protein 1-like 2 [Macaca mulatta]
Length = 200
Score = 221 bits (564), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 107/195 (54%), Positives = 141/195 (72%), Gaps = 3/195 (1%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL VT++ LY+ FS G +LS+R+CRD TRRSLGY YVNY P DA RAL+
Sbjct: 3 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALET 62
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
LNF + + +RIM+S RDPS+RKSG GN+FIKNL K+ID+KAL++ FS+FGNILSCK+A
Sbjct: 63 LNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCKVA 122
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTKF 208
D G KG+GFV F+ +ESA+ AID +NGM +N +++FVG F +ERE A +
Sbjct: 123 CDEKG-PKGYGFVHFQKQESAERAIDVMNGMFLNYRKIFVGRFKSHKEREAERGAWARQS 181
Query: 209 NNVFVKNLDESTTDE 223
+ VK+ +E T +E
Sbjct: 182 TSADVKDFEEDTDEE 196
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 100/194 (51%), Gaps = 6/194 (3%)
Query: 118 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAID 176
++++ +L + L++ FS G ILS +I D + +S G+ +V ++ A+ A++
Sbjct: 2 ASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALE 61
Query: 177 KLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTIT 236
LN +I + V + +R+ K+ NVF+KNL ++ ++ L IF +G I
Sbjct: 62 TLNFDVIKGRPVRIMW----SQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNIL 117
Query: 237 SAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKG 296
S V D G K +GFV+F+ + A +A++ +NG + R+ +VG+ + ERE E
Sbjct: 118 SCKVACDEKG-PKGYGFVHFQKQESAERAIDVMNGMFLNYRKIFVGRFKSHKEREAERGA 176
Query: 297 QFEQAMKETVDKFQ 310
Q+ V F+
Sbjct: 177 WARQSTSADVKDFE 190
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 92/195 (47%), Gaps = 18/195 (9%)
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENADDAAKAVEA 268
+++V +L T+ L + F G I S + RD +S + +VN++ DA +A+E
Sbjct: 3 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALET 62
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
LN R + +Q+ + G N++IKNLG +ID++ L
Sbjct: 63 LNFDVIKGRPVRIMWSQRDPSLRKSGVG----------------NVFIKNLGKTIDNKAL 106
Query: 329 KELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
+FS FG I SCKV D G KG GFV F E A RA+ MNG + + ++V +
Sbjct: 107 YNIFSAFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAIDVMNGMFLNYRKIFVGRFK 165
Query: 389 RKEERRARLQAQFSQ 403
+ER A A Q
Sbjct: 166 SHKEREAERGAWARQ 180
>gi|426257244|ref|XP_004022242.1| PREDICTED: polyadenylate-binding protein 1-like 2 [Ovis aries]
Length = 200
Score = 221 bits (564), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 107/195 (54%), Positives = 141/195 (72%), Gaps = 3/195 (1%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL VT++ LY+ FS G +LS+R+CRD TRRSLGY YVNY P DA RAL+
Sbjct: 3 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRLCRDKITRRSLGYAYVNYQQPVDAKRALET 62
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
LNF + + +RIM+S RDPS+RKSG GN+FIKNL K+ID+KAL++ FS+FGNILSCK+A
Sbjct: 63 LNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCKVA 122
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTKF 208
D G KG+GFV F+ +ESA+ AID +NGM +N +++FVG F +ERE A +
Sbjct: 123 CDEKG-PKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFVGRFKSHKEREAERGAWARQS 181
Query: 209 NNVFVKNLDESTTDE 223
+ VK+ +E T +E
Sbjct: 182 TSADVKDFEEDTDEE 196
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 101/194 (52%), Gaps = 6/194 (3%)
Query: 118 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAID 176
++++ +L + L++ FS G ILS ++ D + +S G+ +V ++ A+ A++
Sbjct: 2 ASLYVGDLHPEVTEAMLYEKFSPAGPILSIRLCRDKITRRSLGYAYVNYQQPVDAKRALE 61
Query: 177 KLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTIT 236
LN +I + V + +R+ K+ NVF+KNL ++ ++ L IF +G I
Sbjct: 62 TLNFDVIKGRPVRIMW----SQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNIL 117
Query: 237 SAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKG 296
S V D G K +GFV+F+ + A +A++A+NG + R+ +VG+ + ERE E
Sbjct: 118 SCKVACDEKG-PKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFVGRFKSHKEREAERGA 176
Query: 297 QFEQAMKETVDKFQ 310
Q+ V F+
Sbjct: 177 WARQSTSADVKDFE 190
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 92/195 (47%), Gaps = 18/195 (9%)
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENADDAAKAVEA 268
+++V +L T+ L + F G I S + RD +S + +VN++ DA +A+E
Sbjct: 3 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRLCRDKITRRSLGYAYVNYQQPVDAKRALET 62
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
LN R + +Q+ + G N++IKNLG +ID++ L
Sbjct: 63 LNFDVIKGRPVRIMWSQRDPSLRKSGVG----------------NVFIKNLGKTIDNKAL 106
Query: 329 KELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
+FS FG I SCKV D G KG GFV F E A RA+ MNG + + ++V +
Sbjct: 107 YNIFSAFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFVGRFK 165
Query: 389 RKEERRARLQAQFSQ 403
+ER A A Q
Sbjct: 166 SHKEREAERGAWARQ 180
>gi|119923699|ref|XP_599343.3| PREDICTED: poly(A) binding protein, cytoplasmic 1-like 2A [Bos
taurus]
gi|297493007|ref|XP_002700050.1| PREDICTED: poly(A) binding protein, cytoplasmic 1-like 2A [Bos
taurus]
gi|358420984|ref|XP_003584787.1| PREDICTED: poly(A) binding protein, cytoplasmic 1-like 2A [Bos
taurus]
gi|296470850|tpg|DAA12965.1| TPA: PABPC1L2B protein-like [Bos taurus]
gi|440892195|gb|ELR45496.1| Polyadenylate-binding protein 1-like 2 [Bos grunniens mutus]
Length = 200
Score = 221 bits (563), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 107/195 (54%), Positives = 141/195 (72%), Gaps = 3/195 (1%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL VT++ LY+ FS G +LS+R+CRD TRRSLGY YVNY P DA RAL+
Sbjct: 3 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRLCRDKITRRSLGYAYVNYQQPVDAKRALET 62
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
LNF + + +RIM+S RDPS+RKSG GN+FIKNL K+ID+KAL++ FS+FGNILSCK+A
Sbjct: 63 LNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCKVA 122
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTKF 208
D G KG+GFV F+ +ESA+ AID +NGM +N +++FVG F +ERE A +
Sbjct: 123 CDEKG-PKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFVGRFKSHKEREAERGAWARQS 181
Query: 209 NNVFVKNLDESTTDE 223
+ VK+ +E T +E
Sbjct: 182 TSADVKDFEEDTDEE 196
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 101/194 (52%), Gaps = 6/194 (3%)
Query: 118 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAID 176
++++ +L + L++ FS G ILS ++ D + +S G+ +V ++ A+ A++
Sbjct: 2 ASLYVGDLHPEVTEAMLYEKFSPAGPILSIRLCRDKITRRSLGYAYVNYQQPVDAKRALE 61
Query: 177 KLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTIT 236
LN +I + V + +R+ K+ NVF+KNL ++ ++ L IF +G I
Sbjct: 62 TLNFDVIKGRPVRIMW----SQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNIL 117
Query: 237 SAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKG 296
S V D G K +GFV+F+ + A +A++A+NG + R+ +VG+ + ERE E
Sbjct: 118 SCKVACDEKG-PKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFVGRFKSHKEREAERGA 176
Query: 297 QFEQAMKETVDKFQ 310
Q+ V F+
Sbjct: 177 WARQSTSADVKDFE 190
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 92/195 (47%), Gaps = 18/195 (9%)
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENADDAAKAVEA 268
+++V +L T+ L + F G I S + RD +S + +VN++ DA +A+E
Sbjct: 3 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRLCRDKITRRSLGYAYVNYQQPVDAKRALET 62
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
LN R + +Q+ + G N++IKNLG +ID++ L
Sbjct: 63 LNFDVIKGRPVRIMWSQRDPSLRKSGVG----------------NVFIKNLGKTIDNKAL 106
Query: 329 KELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
+FS FG I SCKV D G KG GFV F E A RA+ MNG + + ++V +
Sbjct: 107 YNIFSAFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFVGRFK 165
Query: 389 RKEERRARLQAQFSQ 403
+ER A A Q
Sbjct: 166 SHKEREAERGAWARQ 180
>gi|348570494|ref|XP_003471032.1| PREDICTED: polyadenylate-binding protein 1-like 2-like [Cavia
porcellus]
Length = 200
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 106/195 (54%), Positives = 140/195 (71%), Gaps = 3/195 (1%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL VT++ LY+ FS G +LS+R+CRD TRRSLGY YVNY P DA RAL+
Sbjct: 3 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALET 62
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
LNF + + +RIM+S RDPS+RKSG GN+FIKNL K+ID+KAL++ FS+FGNILSCK+A
Sbjct: 63 LNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCKVA 122
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTKF 208
D G KG+GFV F+ +ESA+ AID +NGM +N +++FVG F +ERE A +
Sbjct: 123 CDEKG-PKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFVGRFKSHKEREAERGAWARQS 181
Query: 209 NNVFVKNLDESTTDE 223
+ K+ +E T +E
Sbjct: 182 TSADCKDFEEDTDEE 196
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 100/194 (51%), Gaps = 6/194 (3%)
Query: 118 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAID 176
++++ +L + L++ FS G ILS +I D + +S G+ +V ++ A+ A++
Sbjct: 2 ASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALE 61
Query: 177 KLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTIT 236
LN +I + V + +R+ K+ NVF+KNL ++ ++ L IF +G I
Sbjct: 62 TLNFDVIKGRPVRIMW----SQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNIL 117
Query: 237 SAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKG 296
S V D G K +GFV+F+ + A +A++A+NG + R+ +VG+ + ERE E
Sbjct: 118 SCKVACDEKG-PKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFVGRFKSHKEREAERGA 176
Query: 297 QFEQAMKETVDKFQ 310
Q+ F+
Sbjct: 177 WARQSTSADCKDFE 190
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 92/195 (47%), Gaps = 18/195 (9%)
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENADDAAKAVEA 268
+++V +L T+ L + F G I S + RD +S + +VN++ DA +A+E
Sbjct: 3 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALET 62
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
LN R + +Q+ + G N++IKNLG +ID++ L
Sbjct: 63 LNFDVIKGRPVRIMWSQRDPSLRKSGVG----------------NVFIKNLGKTIDNKAL 106
Query: 329 KELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
+FS FG I SCKV D G KG GFV F E A RA+ MNG + + ++V +
Sbjct: 107 YNIFSAFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFVGRFK 165
Query: 389 RKEERRARLQAQFSQ 403
+ER A A Q
Sbjct: 166 SHKEREAERGAWARQ 180
>gi|444516866|gb|ELV11302.1| Polyadenylate-binding protein 1-like 2 [Tupaia chinensis]
Length = 200
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 106/195 (54%), Positives = 141/195 (72%), Gaps = 3/195 (1%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL VT++ LY+ FS G +LS+R+CRD TRRSLGY YVNY P DA RAL+
Sbjct: 3 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALET 62
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
LNF + + +RIM+S RDPS+RKSG GN+FIKNL K+ID+KAL++ FS+FGNILSCK+A
Sbjct: 63 LNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCKVA 122
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTKF 208
D G KG+GFV F+ +ESA+ AID +NGM +N +++FVG F +ERE A +
Sbjct: 123 CDEKG-PKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFVGRFKSHKEREAERGAWARQS 181
Query: 209 NNVFVKNLDESTTDE 223
+ VK+ ++ T +E
Sbjct: 182 TSADVKDFEDDTDEE 196
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 101/194 (52%), Gaps = 6/194 (3%)
Query: 118 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAID 176
++++ +L + L++ FS G ILS +I D + +S G+ +V ++ A+ A++
Sbjct: 2 ASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALE 61
Query: 177 KLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTIT 236
LN +I + V + +R+ K+ NVF+KNL ++ ++ L IF +G I
Sbjct: 62 TLNFDVIKGRPVRIMW----SQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNIL 117
Query: 237 SAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKG 296
S V D G K +GFV+F+ + A +A++A+NG + R+ +VG+ + ERE E
Sbjct: 118 SCKVACDEKG-PKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFVGRFKSHKEREAERGA 176
Query: 297 QFEQAMKETVDKFQ 310
Q+ V F+
Sbjct: 177 WARQSTSADVKDFE 190
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 92/195 (47%), Gaps = 18/195 (9%)
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENADDAAKAVEA 268
+++V +L T+ L + F G I S + RD +S + +VN++ DA +A+E
Sbjct: 3 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALET 62
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
LN R + +Q+ + G N++IKNLG +ID++ L
Sbjct: 63 LNFDVIKGRPVRIMWSQRDPSLRKSGVG----------------NVFIKNLGKTIDNKAL 106
Query: 329 KELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
+FS FG I SCKV D G KG GFV F E A RA+ MNG + + ++V +
Sbjct: 107 YNIFSAFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFVGRFK 165
Query: 389 RKEERRARLQAQFSQ 403
+ER A A Q
Sbjct: 166 SHKEREAERGAWARQ 180
>gi|194228035|ref|XP_001914759.1| PREDICTED: polyadenylate-binding protein 1-like 2-like [Equus
caballus]
Length = 200
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 106/195 (54%), Positives = 140/195 (71%), Gaps = 3/195 (1%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL VT++ LY+ F G +LS+R+CRD TRRSLGY YVNY P DA RAL+
Sbjct: 3 SLYVGDLHPEVTEAMLYEKFRPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALET 62
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
LNF + + +RIM+S RDPS+RKSG GN+FIKNL K+ID+KAL++ FS+FGNILSCK+A
Sbjct: 63 LNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCKVA 122
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTKF 208
D G KG+GFV F+ +ESA+ AID +NGM +N +++FVG F +ERE A +
Sbjct: 123 CDEKG-PKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFVGRFKSHKEREAERGAWARQS 181
Query: 209 NNVFVKNLDESTTDE 223
+ VK+ +E T +E
Sbjct: 182 TSADVKDFEEDTDEE 196
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 100/194 (51%), Gaps = 6/194 (3%)
Query: 118 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAID 176
++++ +L + L++ F G ILS +I D + +S G+ +V ++ A+ A++
Sbjct: 2 ASLYVGDLHPEVTEAMLYEKFRPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALE 61
Query: 177 KLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTIT 236
LN +I + V + +R+ K+ NVF+KNL ++ ++ L IF +G I
Sbjct: 62 TLNFDVIKGRPVRIMW----SQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNIL 117
Query: 237 SAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKG 296
S V D G K +GFV+F+ + A +A++A+NG + R+ +VG+ + ERE E
Sbjct: 118 SCKVACDEKG-PKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFVGRFKSHKEREAERGA 176
Query: 297 QFEQAMKETVDKFQ 310
Q+ V F+
Sbjct: 177 WARQSTSADVKDFE 190
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 92/195 (47%), Gaps = 18/195 (9%)
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENADDAAKAVEA 268
+++V +L T+ L + F G I S + RD +S + +VN++ DA +A+E
Sbjct: 3 SLYVGDLHPEVTEAMLYEKFRPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALET 62
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
LN R + +Q+ + G N++IKNLG +ID++ L
Sbjct: 63 LNFDVIKGRPVRIMWSQRDPSLRKSGVG----------------NVFIKNLGKTIDNKAL 106
Query: 329 KELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
+FS FG I SCKV D G KG GFV F E A RA+ MNG + + ++V +
Sbjct: 107 YNIFSAFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFVGRFK 165
Query: 389 RKEERRARLQAQFSQ 403
+ER A A Q
Sbjct: 166 SHKEREAERGAWARQ 180
>gi|351699464|gb|EHB02383.1| Polyadenylate-binding protein 1-like 2 [Heterocephalus glaber]
Length = 200
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 101/170 (59%), Positives = 130/170 (76%), Gaps = 1/170 (0%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL VT++ LY+ FS G +LS+R+CRD TRRSLGY YVNY P DA RAL+
Sbjct: 3 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALET 62
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
LNF + + +RIM+S RDPS+RKSG GN+FIKNL K+ID+KAL++ FS+FGNILSCK+A
Sbjct: 63 LNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSTFGNILSCKVA 122
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERE 200
D G KG+GFV F+ +ESA+ AID +NGM +N +++FVG F +ERE
Sbjct: 123 CDEKG-PKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFVGRFKSHKERE 171
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 96/176 (54%), Gaps = 6/176 (3%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDK 177
++++ +L + L++ FS G ILS +I D + +S G+ +V ++ A+ A++
Sbjct: 3 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALET 62
Query: 178 LNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITS 237
LN +I + V + +R+ K+ NVF+KNL ++ ++ L IF +G I S
Sbjct: 63 LNFDVIKGRPVRIMW----SQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSTFGNILS 118
Query: 238 AVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQE 293
V D G K +GFV+F+ + A +A++A+NG + R+ +VG+ + ERE E
Sbjct: 119 CKVACDEKG-PKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFVGRFKSHKEREAE 173
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 92/195 (47%), Gaps = 18/195 (9%)
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENADDAAKAVEA 268
+++V +L T+ L + F G I S + RD +S + +VN++ DA +A+E
Sbjct: 3 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALET 62
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
LN R + +Q+ + G N++IKNLG +ID++ L
Sbjct: 63 LNFDVIKGRPVRIMWSQRDPSLRKSGVG----------------NVFIKNLGKTIDNKAL 106
Query: 329 KELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
+FS FG I SCKV D G KG GFV F E A RA+ MNG + + ++V +
Sbjct: 107 YNIFSTFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFVGRFK 165
Query: 389 RKEERRARLQAQFSQ 403
+ER A A Q
Sbjct: 166 SHKEREAERGAWARQ 180
>gi|27469824|gb|AAH41956.1| PABPC1L2B protein [Homo sapiens]
Length = 243
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 107/199 (53%), Positives = 141/199 (70%), Gaps = 3/199 (1%)
Query: 27 FLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAAR 86
F SLYVGDL VT++ LY+ FS G +LS+ +CRD TRRSLGY YVNY P DA R
Sbjct: 42 FQMASLYVGDLHPEVTEAMLYEKFSPAGPILSISICRDKITRRSLGYAYVNYQQPVDAKR 101
Query: 87 ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
AL+ LNF + + +RIM+S RDPS+RKSG GN+FIKNL K+ID+KAL++ FS+FGNILS
Sbjct: 102 ALETLNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILS 161
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AI 204
CK+A D G KG+GFV F+ +ESA+ AID +NGM +N +++FVG F +ERE A
Sbjct: 162 CKVACDEKG-PKGYGFVHFQKQESAERAIDVMNGMFLNYRKIFVGRFKSHKEREAERGAW 220
Query: 205 KTKFNNVFVKNLDESTTDE 223
+ + VK+ +E T +E
Sbjct: 221 ARQSTSADVKDFEEDTDEE 239
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 99/193 (51%), Gaps = 6/193 (3%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDK 177
++++ +L + L++ FS G ILS I D + +S G+ +V ++ A+ A++
Sbjct: 46 SLYVGDLHPEVTEAMLYEKFSPAGPILSISICRDKITRRSLGYAYVNYQQPVDAKRALET 105
Query: 178 LNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITS 237
LN +I + V + +R+ K+ NVF+KNL ++ ++ L IF +G I S
Sbjct: 106 LNFDVIKGRPVRIMW----SQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILS 161
Query: 238 AVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQ 297
V D G K +GFV+F+ + A +A++ +NG + R+ +VG+ + ERE E
Sbjct: 162 CKVACDEKG-PKGYGFVHFQKQESAERAIDVMNGMFLNYRKIFVGRFKSHKEREAERGAW 220
Query: 298 FEQAMKETVDKFQ 310
Q+ V F+
Sbjct: 221 ARQSTSADVKDFE 233
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 92/195 (47%), Gaps = 18/195 (9%)
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENADDAAKAVEA 268
+++V +L T+ L + F G I S + RD +S + +VN++ DA +A+E
Sbjct: 46 SLYVGDLHPEVTEAMLYEKFSPAGPILSISICRDKITRRSLGYAYVNYQQPVDAKRALET 105
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
LN R + +Q+ + G N++IKNLG +ID++ L
Sbjct: 106 LNFDVIKGRPVRIMWSQRDPSLRKSGVG----------------NVFIKNLGKTIDNKAL 149
Query: 329 KELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
+FS FG I SCKV D G KG GFV F E A RA+ MNG + + ++V +
Sbjct: 150 YNIFSAFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAIDVMNGMFLNYRKIFVGRFK 208
Query: 389 RKEERRARLQAQFSQ 403
+ER A A Q
Sbjct: 209 SHKEREAERGAWARQ 223
>gi|431844457|gb|ELK01429.1| Polyadenylate-binding protein 1-like 2 [Pteropus alecto]
Length = 200
Score = 218 bits (555), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 101/172 (58%), Positives = 130/172 (75%), Gaps = 1/172 (0%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
SLYVGDL VT++ LY+ FS G +LS+R+CRD TRRSLGY YVNY P DA RAL+
Sbjct: 2 ASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPMDAKRALE 61
Query: 90 VLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKI 149
LNF + + +RIM+S RDPS+RKSG GN+FIKNL KSID+KAL++ FS+FGNILSCK+
Sbjct: 62 TLNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKSIDNKALYNIFSAFGNILSCKV 121
Query: 150 ATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
A D G KG+GFV F+ +ESA+ AI+ +NGM +N +++FVG F +ERE
Sbjct: 122 ACDEKG-PKGYGFVHFQKQESAERAINAMNGMFLNYRKIFVGRFKSHKEREA 172
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 100/193 (51%), Gaps = 6/193 (3%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDK 177
++++ +L + L++ FS G ILS +I D + +S G+ +V ++ A+ A++
Sbjct: 3 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPMDAKRALET 62
Query: 178 LNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITS 237
LN +I + V + +R+ K+ NVF+KNL +S ++ L IF +G I S
Sbjct: 63 LNFDVIKGRPVRIMW----SQRDPSLRKSGVGNVFIKNLGKSIDNKALYNIFSAFGNILS 118
Query: 238 AVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQ 297
V D G K +GFV+F+ + A +A+ A+NG + R+ +VG+ + ERE E
Sbjct: 119 CKVACDEKG-PKGYGFVHFQKQESAERAINAMNGMFLNYRKIFVGRFKSHKEREAERGAW 177
Query: 298 FEQAMKETVDKFQ 310
Q+ V FQ
Sbjct: 178 ARQSTSGDVKGFQ 190
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 92/195 (47%), Gaps = 18/195 (9%)
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENADDAAKAVEA 268
+++V +L T+ L + F G I S + RD +S + +VN++ DA +A+E
Sbjct: 3 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPMDAKRALET 62
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
LN R + +Q+ + G N++IKNLG SID++ L
Sbjct: 63 LNFDVIKGRPVRIMWSQRDPSLRKSGVG----------------NVFIKNLGKSIDNKAL 106
Query: 329 KELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
+FS FG I SCKV D G KG GFV F E A RA+ MNG + + ++V +
Sbjct: 107 YNIFSAFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAINAMNGMFLNYRKIFVGRFK 165
Query: 389 RKEERRARLQAQFSQ 403
+ER A A Q
Sbjct: 166 SHKEREAERGAWARQ 180
>gi|33504432|emb|CAD43730.1| putative poly(A)-binding protein [Mangifera indica]
Length = 130
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 102/130 (78%), Positives = 116/130 (89%)
Query: 299 EQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVA 358
EQA E DKFQG NLY+KNL DSIDD+KLK+LFS+FG+ITSCKVMRDP+GIS+GSGFVA
Sbjct: 1 EQAWNEVADKFQGANLYMKNLDDSIDDDKLKQLFSQFGSITSCKVMRDPNGISRGSGFVA 60
Query: 359 FSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMP 418
F+TPEEASRA+ EMNGKM+VSKPL+VA+AQRKE+RRARLQAQFSQ+RPVAM PSV RMP
Sbjct: 61 FTTPEEASRAILEMNGKMVVSKPLFVALAQRKEDRRARLQAQFSQIRPVAMAPSVASRMP 120
Query: 419 MYPPGPSGLG 428
MYPP G G
Sbjct: 121 MYPPCGPGHG 130
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 67/105 (63%)
Query: 196 KQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVN 255
+Q VA K + N+++KNLD+S D+ LK++F ++G+ITS VMRD +G S+ GFV
Sbjct: 1 EQAWNEVADKFQGANLYMKNLDDSIDDDKLKQLFSQFGSITSCKVMRDPNGISRGSGFVA 60
Query: 256 FENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQ 300
F ++A++A+ +NGK + +V AQ+K +R L+ QF Q
Sbjct: 61 FTTPEEASRAILEMNGKMVVSKPLFVALAQRKEDRRARLQAQFSQ 105
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Query: 118 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDK 177
N+++KNLD SID L FS FG+I SCK+ D +G S+G GFV F E A AI +
Sbjct: 14 ANLYMKNLDDSIDDDKLKQLFSQFGSITSCKVMRDPNGISRGSGFVAFTTPEEASRAILE 73
Query: 178 LNGMLINDKQVFVGHFLRKQERETVAIKTKFNNV 211
+NG ++ K +FV RK++R ++ +F+ +
Sbjct: 74 MNGKMVVSKPLFVALAQRKEDRRA-RLQAQFSQI 106
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 24 GNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPAD 83
++F +LY+ +LD ++ D +L LFSQ G + S +V RD S G G+V + P +
Sbjct: 8 ADKFQGANLYMKNLDDSIDDDKLKQLFSQFGSITSCKVMRD-PNGISRGSGFVAFTTPEE 66
Query: 84 AARALDVLNFTPLNNKSIRIMYSHR 108
A+RA+ +N + +K + + + R
Sbjct: 67 ASRAILEMNGKMVVSKPLFVALAQR 91
>gi|449486336|ref|XP_004177123.1| PREDICTED: embryonic polyadenylate-binding protein A-like
[Taeniopygia guttata]
Length = 167
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 99/166 (59%), Positives = 130/166 (78%), Gaps = 1/166 (0%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
SG + SLYVGDL +VT++ LY+ FS G ++S+RVCRD++TRRSLGY Y+N+ PA
Sbjct: 3 SGPGYPLASLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDVATRRSLGYAYINFQQPA 62
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
DA RALD +NF + + IRIM+S RDP +RKSG GN+FIKNLD SID+KAL+DTFS+FG
Sbjct: 63 DAERALDTMNFEVIKGRPIRIMWSQRDPGLRKSGVGNVFIKNLDDSIDNKALYDTFSAFG 122
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQV 188
NILSCK+ D +G S+G+GFV FE E+A AI+ +NGML+ND++V
Sbjct: 123 NILSCKVVCDENG-SRGYGFVHFETHEAATRAIETMNGMLLNDRKV 167
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 90/161 (55%), Gaps = 6/161 (3%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATD-GSGQSKGFGFVQFENKESAQNAIDK 177
++++ +L + L++ FS G I+S ++ D + +S G+ ++ F+ A+ A+D
Sbjct: 11 SLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDVATRRSLGYAYINFQQPADAERALDT 70
Query: 178 LNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITS 237
+N +I + + + +R+ K+ NVF+KNLD+S ++ L F +G I S
Sbjct: 71 MNFEVIKGRPIRI----MWSQRDPGLRKSGVGNVFIKNLDDSIDNKALYDTFSAFGNILS 126
Query: 238 AVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDRE 278
V+ D +G S+ +GFV+FE + A +A+E +NG +DR+
Sbjct: 127 CKVVCDENG-SRGYGFVHFETHEAATRAIETMNGMLLNDRK 166
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 88/169 (52%), Gaps = 18/169 (10%)
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD-GDGKSKCFGFVNFENADDAAKAVEA 268
+++V +L T+ L + F G I S V RD +S + ++NF+ DA +A++
Sbjct: 11 SLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDVATRRSLGYAYINFQQPADAERALDT 70
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
+N + R + +Q+ + G N++IKNL DSID++ L
Sbjct: 71 MNFEVIKGRPIRIMWSQRDPGLRKSGVG----------------NVFIKNLDDSIDNKAL 114
Query: 329 KELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMI 377
+ FS FG I SCKV+ D +G S+G GFV F T E A+RA+ MNG ++
Sbjct: 115 YDTFSAFGNILSCKVVCDENG-SRGYGFVHFETHEAATRAIETMNGMLL 162
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 313 NLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRD-PSGISKGSGFVAFSTPEEASRALAE 371
+LY+ +L + + L E FS G I S +V RD + S G ++ F P +A RAL
Sbjct: 11 SLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDVATRRSLGYAYINFQQPADAERALDT 70
Query: 372 MNGKMIVSKPLYVAVAQR 389
MN ++I +P+ + +QR
Sbjct: 71 MNFEVIKGRPIRIMWSQR 88
>gi|190405722|gb|EDV08989.1| poly(A) binding protein [Saccharomyces cerevisiae RM11-1a]
Length = 262
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 101/188 (53%), Positives = 143/188 (76%), Gaps = 2/188 (1%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVGDL+ +V+++ LYD+FS +G V S+RVCRD T+ SLGY YVN+ + +A+
Sbjct: 37 SASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAI 96
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LN+TP+ + RIM+S RDPS+RK G+GNIFIKNL ID+KAL+DTFS FG+ILS K
Sbjct: 97 EQLNYTPIKGRLCRIMWSQRDPSLRKKGSGNIFIKNLHPDIDNKALYDTFSVFGDILSSK 156
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK- 207
IATD +G+SKGFGFV FE + +A+ AID LNGML+N ++++V L ++ER++ +TK
Sbjct: 157 IATDENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQLEETKA 216
Query: 208 -FNNVFVK 214
+ N++VK
Sbjct: 217 HYTNLYVK 224
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 107/207 (51%), Gaps = 19/207 (9%)
Query: 114 KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQ 172
++ + ++++ +L+ S+ L+D FS G++ S ++ D + S G+ +V F + E+ +
Sbjct: 34 ENSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGR 93
Query: 173 NAIDKLNGMLINDKQVFVGHFLR--KQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFG 230
AI++LN I G R +R+ K N+F+KNL ++ L F
Sbjct: 94 KAIEQLNYTPIK------GRLCRIMWSQRDPSLRKKGSGNIFIKNLHPDIDNKALYDTFS 147
Query: 231 EYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSER 290
+G I S+ + D +GKSK FGFV+FE A +A++ALNG + +E YV + ER
Sbjct: 148 VFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKER 207
Query: 291 EQELKGQFEQAMKETVDKFQGLNLYIK 317
+ +L +ET K NLY+K
Sbjct: 208 DSQL--------EET--KAHYTNLYVK 224
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 101/200 (50%), Gaps = 17/200 (8%)
Query: 200 ETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKC-FGFVNFEN 258
E+ +++ +++V +L+ S ++ L IF G+++S V RD K+ + +VNF +
Sbjct: 29 ESQSVENSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFND 88
Query: 259 ADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKN 318
+ KA+E LN R + +Q+ ++ G N++IKN
Sbjct: 89 HEAGRKAIEQLNYTPIKGRLCRIMWSQRDPSLRKKGSG----------------NIFIKN 132
Query: 319 LGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIV 378
L ID++ L + FS FG I S K+ D +G SKG GFV F A A+ +NG ++
Sbjct: 133 LHPDIDNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAIDALNGMLLN 192
Query: 379 SKPLYVAVAQRKEERRARLQ 398
+ +YVA ++ER ++L+
Sbjct: 193 GQEIYVAPHLSRKERDSQLE 212
>gi|348677381|gb|EGZ17198.1| hypothetical protein PHYSODRAFT_354553 [Phytophthora sojae]
Length = 317
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 114/214 (53%), Positives = 153/214 (71%), Gaps = 11/214 (5%)
Query: 104 MYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGF 162
M+S RDPS+RKSG GNIF+KNLD SID+KAL+DTFS FGNILSCK+A D +G SKG+G+
Sbjct: 1 MWSQRDPSLRKSGVGNIFVKNLDTSIDNKALYDTFSLFGNILSCKVAIDHTTGASKGYGY 60
Query: 163 VQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTD 222
V +E E+A AI K+NGMLI +VFVGHF ++Q+R + N +VKN+ TD
Sbjct: 61 VHYETAEAATEAIAKINGMLIAGTEVFVGHFQKRQDRPDA---DDWTNCYVKNIPTQWTD 117
Query: 223 EDLKKIFGEYGTITSAVVMRDGDG--KSKCFGFVNFENADDAAKAVEALNGKKFD----- 275
DL K F +G + SAVVM+D +++ FGFVN+E+++ A KAV+ALNGK +
Sbjct: 118 ADLLKEFEPFGKVLSAVVMKDNANPEQNRGFGFVNYEDSEAAHKAVDALNGKSYPAGEGV 177
Query: 276 DREWYVGKAQKKSEREQELKGQFEQAMKETVDKF 309
+ E YVGKAQK+SERE+EL+ +FEQ E ++K+
Sbjct: 178 ETELYVGKAQKRSERERELRNKFEQLKMERINKY 211
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 125/380 (32%), Positives = 178/380 (46%), Gaps = 77/380 (20%)
Query: 198 ERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGD-GKSKCFGFVNF 256
+R+ K+ N+FVKNLD S ++ L F +G I S V D G SK +G+V++
Sbjct: 4 QRDPSLRKSGVGNIFVKNLDTSIDNKALYDTFSLFGNILSCKVAIDHTTGASKGYGYVHY 63
Query: 257 ENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYI 316
E A+ A +A+ +NG E +VG QK+ +R D N Y+
Sbjct: 64 ETAEAATEAIAKINGMLIAGTEVFVGHFQKRQDRP---------------DADDWTNCYV 108
Query: 317 KNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGI--SKGSGFVAFSTPEEASRALAEMNG 374
KN+ D L + F FG + S VM+D + ++G GFV + E A +A+ +NG
Sbjct: 109 KNIPTQWTDADLLKEFEPFGKVLSAVVMKDNANPEQNRGFGFVNYEDSEAAHKAVDALNG 168
Query: 375 KMI-----VSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQ 429
K V LYV AQ++ ER L+ +F Q++ R+ Y
Sbjct: 169 KSYPAGEGVETELYVGKAQKRSERERELRNKFEQLK--------MERINKYTANAR---- 216
Query: 430 QFLYGQAPPAIIPPQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDAS 489
P +PPQ G M P AG
Sbjct: 217 -----NHPARDVPPQ-------------------------GVMPPAAPVQNAG------- 239
Query: 490 VGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHL 549
P P+T S ALA ASPE Q+ ++GE LYPL+ + + + A K+TGMLLEMD E+LHL
Sbjct: 240 ---PEPLT--SAALAAASPEIQKNMIGERLYPLIHRQQPELAGKITGMLLEMDNGELLHL 294
Query: 550 LESPEALKAKVAEAMEVLRS 569
LESPEAL+AK++EA+ VL +
Sbjct: 295 LESPEALEAKISEALAVLEA 314
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 101/200 (50%), Gaps = 9/200 (4%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
+++V +LD ++ + LYD FS G +LS +V D +T S GYGYV+Y A A+
Sbjct: 16 NIFVKNLDTSIDNKALYDTFSLFGNILSCKVAIDHTTGASKGYGYVHYETAEAATEAIAK 75
Query: 91 LNFTPLNNKSIRI-MYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKI 149
+N + + + + R N ++KN+ L F FG +LS +
Sbjct: 76 INGMLIAGTEVFVGHFQKRQDRPDADDWTNCYVKNIPTQWTDADLLKEFEPFGKVLSAVV 135
Query: 150 ATDGSG--QSKGFGFVQFENKESAQNAIDKLNGMLIN-----DKQVFVGHFLRKQERETV 202
D + Q++GFGFV +E+ E+A A+D LNG + +++VG ++ ERE
Sbjct: 136 MKDNANPEQNRGFGFVNYEDSEAAHKAVDALNGKSYPAGEGVETELYVGKAQKRSERER- 194
Query: 203 AIKTKFNNVFVKNLDESTTD 222
++ KF + ++ +++ T +
Sbjct: 195 ELRNKFEQLKMERINKYTAN 214
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRD-LSTRRSLGYGYVNYANPADAARAL 88
T+ YV ++ TD+ L F G+VLS V +D + ++ G+G+VNY + A +A+
Sbjct: 104 TNCYVKNIPTQWTDADLLKEFEPFGKVLSAVVMKDNANPEQNRGFGFVNYEDSEAAHKAV 163
Query: 89 DVLN 92
D LN
Sbjct: 164 DALN 167
>gi|341883809|gb|EGT39744.1| hypothetical protein CAEBREN_05859 [Caenorhabditis brenneri]
Length = 467
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 128/254 (50%), Positives = 166/254 (65%), Gaps = 13/254 (5%)
Query: 181 MLINDKQVFVGHFLRKQER--ETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSA 238
ML+ K+VFVG F + +R E K+ NV+VKN + E L+K+F +YGTITS
Sbjct: 1 MLLAGKKVFVGKFQPRAQRNRELGETAKKYTNVYVKNFGDHYNKESLEKLFAKYGTITSC 60
Query: 239 VVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFD--DREWYVGKAQKKSEREQELKG 296
VM DGKSK FGFV F ++A AV+ALN + D + +V +AQKKSER ELK
Sbjct: 61 DVMTS-DGKSKGFGFVAFAEPEEAEAAVQALNDSPVEGSDLKLHVCRAQKKSERHAELKK 119
Query: 297 QFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGF 356
+ EQ E + K+QG+NLY+KNL +S+DDE LK+ F FG ITS KVM D +G SKG GF
Sbjct: 120 KHEQHKVERMQKYQGVNLYVKNLDESVDDEALKKQFESFGNITSAKVMTDENGRSKGFGF 179
Query: 357 VAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQ-MRPVAMGPSVP- 414
V F PEEA+ A+ EMN KM+ SKPLYVA+AQRKE+RRA+L +Q+ Q + + M +VP
Sbjct: 180 VCFEKPEEATTAVTEMNSKMVCSKPLYVALAQRKEDRRAQLASQYMQRLASMRMHTNVPG 239
Query: 415 ----PRMPMYPPGP 424
P+ P PGP
Sbjct: 240 GGLYPQQPQ--PGP 251
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 100/188 (53%), Gaps = 20/188 (10%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
T++YV + + L LF++ G + S V S +S G+G+V +A P +A A+
Sbjct: 31 TNVYVKNFGDHYNKESLEKLFAKYGTITSCDVM--TSDGKSKGFGFVAFAEPEEAEAAVQ 88
Query: 90 VLNFTPLNNKSIRIMYS------------------HRDPSIRKSGTGNIFIKNLDKSIDH 131
LN +P+ +++ H+ ++K N+++KNLD+S+D
Sbjct: 89 ALNDSPVEGSDLKLHVCRAQKKSERHAELKKKHEQHKVERMQKYQGVNLYVKNLDESVDD 148
Query: 132 KALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVG 191
+AL F SFGNI S K+ TD +G+SKGFGFV FE E A A+ ++N ++ K ++V
Sbjct: 149 EALKKQFESFGNITSAKVMTDENGRSKGFGFVCFEKPEEATTAVTEMNSKMVCSKPLYVA 208
Query: 192 HFLRKQER 199
RK++R
Sbjct: 209 LAQRKEDR 216
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 58/87 (66%), Gaps = 6/87 (6%)
Query: 490 VGQPMPITALSTALANASPEQQRTLLGESLYPLVEQL---ERDAAAKVTGMLLEMDQTEV 546
+G P+T S LA A+P++Q+ LLGE +Y L+E+L +DA K+TGM+LE+D +E+
Sbjct: 384 IGGQEPLT--SAMLAAAAPQEQKQLLGERIYALIEKLYPGHKDAG-KITGMMLEIDNSEL 440
Query: 547 LHLLESPEALKAKVAEAMEVLRSVAQQ 573
+ +L+ E ++KV EA VL S +Q
Sbjct: 441 IMMLQDSELFRSKVDEAASVLASSQKQ 467
>gi|33504434|emb|CAD44189.1| putative poly(A) binding protein [Mangifera indica]
Length = 130
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 101/130 (77%), Positives = 113/130 (86%)
Query: 299 EQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVA 358
EQA E DKFQG NLY+KNL SIDD+KLK+LFS+FG+ITSCKVMRDP+GIS+GSGFVA
Sbjct: 1 EQAWNEVADKFQGANLYMKNLDYSIDDDKLKQLFSQFGSITSCKVMRDPNGISRGSGFVA 60
Query: 359 FSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMP 418
F+TPEEASRA+ EMNGKM+V KPLYVA+AQRKE RRARLQAQFSQ+RPVAM PSV RMP
Sbjct: 61 FTTPEEASRAILEMNGKMVVGKPLYVALAQRKEVRRARLQAQFSQIRPVAMAPSVASRMP 120
Query: 419 MYPPGPSGLG 428
MYPP G G
Sbjct: 121 MYPPCGPGHG 130
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 65/105 (61%)
Query: 196 KQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVN 255
+Q VA K + N+++KNLD S D+ LK++F ++G+ITS VMRD +G S+ GFV
Sbjct: 1 EQAWNEVADKFQGANLYMKNLDYSIDDDKLKQLFSQFGSITSCKVMRDPNGISRGSGFVA 60
Query: 256 FENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQ 300
F ++A++A+ +NGK + YV AQ+K R L+ QF Q
Sbjct: 61 FTTPEEASRAILEMNGKMVVGKPLYVALAQRKEVRRARLQAQFSQ 105
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
Query: 118 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDK 177
N+++KNLD SID L FS FG+I SCK+ D +G S+G GFV F E A AI +
Sbjct: 14 ANLYMKNLDYSIDDDKLKQLFSQFGSITSCKVMRDPNGISRGSGFVAFTTPEEASRAILE 73
Query: 178 LNGMLINDKQVFVGHFLRKQERETVAIKTKFNNV 211
+NG ++ K ++V RK+ R ++ +F+ +
Sbjct: 74 MNGKMVVGKPLYVALAQRKEVRRA-RLQAQFSQI 106
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 24 GNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPAD 83
++F +LY+ +LD+++ D +L LFSQ G + S +V RD S G G+V + P +
Sbjct: 8 ADKFQGANLYMKNLDYSIDDDKLKQLFSQFGSITSCKVMRD-PNGISRGSGFVAFTTPEE 66
Query: 84 AARALDVLNFTPLNNKSIRIMYSHR 108
A+RA+ +N + K + + + R
Sbjct: 67 ASRAILEMNGKMVVGKPLYVALAQR 91
>gi|295414050|gb|ADG08184.1| cytoplasmic poly(A) binding protein, partial [Schmidtea
mediterranea]
Length = 491
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 117/229 (51%), Positives = 148/229 (64%), Gaps = 19/229 (8%)
Query: 225 LKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKA 284
L+++F E+G ITSA VM D +GKSK FGFV F++++ A AV+ALNGK F DR+ YVG+A
Sbjct: 10 LREMFLEFGEITSAKVMIDENGKSKGFGFVCFKDSETAESAVKALNGKMFKDRQLYVGRA 69
Query: 285 QKKSEREQELKGQFEQAMKETVDKF-QGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKV 343
QKK+ER EL+ FE+ E ++ QG+NLY+KNL DSIDD +LK+ F FG ITS KV
Sbjct: 70 QKKNERLDELRSHFEKQRAERSSRYTQGVNLYVKNLDDSIDDTRLKQEFVVFGNITSAKV 129
Query: 344 MRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQ 403
M D + SKG GFV FS PEEA++A+ EMNGK+ SKPLYVA+AQRKE+R+A L +Q+ Q
Sbjct: 130 MTDSNNRSKGFGFVCFSNPEEATKAVTEMNGKICGSKPLYVALAQRKEDRKAHLASQYMQ 189
Query: 404 MRPVAMGPSVPPRMPMYPP----------GPSGLGQQFLYGQAPPAIIP 442
V P YP GP G Y AP A P
Sbjct: 190 --------RVNPHRNNYPNQVSVNTLISGGPPGGPSILPYAFAPNASTP 230
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 107/180 (59%), Gaps = 13/180 (7%)
Query: 134 LHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHF 193
L + F FG I S K+ D +G+SKGFGFV F++ E+A++A+ LNG + D+Q++VG
Sbjct: 10 LREMFLEFGEITSAKVMIDENGKSKGFGFVCFKDSETAESAVKALNGKMFKDRQLYVGRA 69
Query: 194 LRKQER-------------ETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVV 240
+K ER E + T+ N++VKNLD+S D LK+ F +G ITSA V
Sbjct: 70 QKKNERLDELRSHFEKQRAERSSRYTQGVNLYVKNLDDSIDDTRLKQEFVVFGNITSAKV 129
Query: 241 MRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQ 300
M D + +SK FGFV F N ++A KAV +NGK + YV AQ+K +R+ L Q+ Q
Sbjct: 130 MTDSNNRSKGFGFVCFSNPEEATKAVTEMNGKICGSKPLYVALAQRKEDRKAHLASQYMQ 189
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 90/173 (52%), Gaps = 18/173 (10%)
Query: 45 QLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI- 103
+L ++F + G++ S +V D +S G+G+V + + A A+ LN ++ + +
Sbjct: 9 KLREMFLEFGEITSAKVMID-ENGKSKGFGFVCFKDSETAESAVKALNGKMFKDRQLYVG 67
Query: 104 -----------MYSH-----RDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSC 147
+ SH + S R + N+++KNLD SID L F FGNI S
Sbjct: 68 RAQKKNERLDELRSHFEKQRAERSSRYTQGVNLYVKNLDDSIDDTRLKQEFVVFGNITSA 127
Query: 148 KIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERE 200
K+ TD + +SKGFGFV F N E A A+ ++NG + K ++V RK++R+
Sbjct: 128 KVMTDSNNRSKGFGFVCFSNPEEATKAVTEMNGKICGSKPLYVALAQRKEDRK 180
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 50/79 (63%)
Query: 327 KLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 386
KL+E+F EFG ITS KVM D +G SKG GFV F E A A+ +NGKM + LYV
Sbjct: 9 KLREMFLEFGEITSAKVMIDENGKSKGFGFVCFKDSETAESAVKALNGKMFKDRQLYVGR 68
Query: 387 AQRKEERRARLQAQFSQMR 405
AQ+K ER L++ F + R
Sbjct: 69 AQKKNERLDELRSHFEKQR 87
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 56/79 (70%), Gaps = 2/79 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+T + LA+A +Q+ +LGE LYPLV ++ + A K+TGMLLE+D TE+LH+LES +
Sbjct: 392 PLTI--STLASAPIAEQKQMLGERLYPLVHRMYPELAGKITGMLLEIDNTELLHMLESED 449
Query: 555 ALKAKVAEAMEVLRSVAQQ 573
+L K+ EAM VL+S Q
Sbjct: 450 SLTTKIEEAMNVLQSHKNQ 468
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
+LYV +LD ++ D++L F G + S +V D S RS G+G+V ++NP +A +A+
Sbjct: 99 NLYVKNLDDSIDDTRLKQEFVVFGNITSAKVMTD-SNNRSKGFGFVCFSNPEEATKAVTE 157
Query: 91 LNFTPLNNKSIRIMYSHR 108
+N +K + + + R
Sbjct: 158 MNGKICGSKPLYVALAQR 175
>gi|123408784|ref|XP_001303266.1| Polyadenylate-binding protein [Trichomonas vaginalis G3]
gi|121884631|gb|EAX90336.1| Polyadenylate-binding protein, putative [Trichomonas vaginalis G3]
Length = 461
Score = 211 bits (538), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 139/389 (35%), Positives = 222/389 (57%), Gaps = 14/389 (3%)
Query: 28 LTTSLYVGDLDFNVTDSQLYDLFSQVGQVL--SVRVCRDLSTRRSLGYGYVNYANPADAA 85
LTT ++VGDL ++ +S L F++ G+++ S V + T S + +V +A AA
Sbjct: 4 LTTQIFVGDLPKDIDESFLKQFFAESGEIIPNSGIVLKKHKTLDS-SFAFVTFATHEQAA 62
Query: 86 RALDVLNFTPLNNKSIRIMYSHRDP-SIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNI 144
+A+ LN+T L+ + IRI++ + +I KSG G++FI LD+SI+ LHD FS+FG I
Sbjct: 63 KAMKNLNYTKLDGRPIRILWCDTETKAIIKSGRGSLFINGLDESIEVSQLHDAFSNFGEI 122
Query: 145 LSCKI-ATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVA 203
+SCKI TDG +S+G+G++QF N E+A+ A +L IN K + + ++ RK R
Sbjct: 123 ISCKIPLTDG--KSRGYGYIQFRNPENAEKAKLELADASINGKPIKIDNYNRKSRRNP-- 178
Query: 204 IKTKFNNVFVKNL--DESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADD 261
F NV++K L D+ TDEDL+KIF +G I + + +D +G SK FGF NF+ +D
Sbjct: 179 -DEDFTNVYIKPLPVDQVKTDEDLRKIFEPFGEIQNPSLKKDENGNSKGFGFCNFKLHED 237
Query: 262 AAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGD 321
A KAVE LNG++ V + K E+E + + +++ ++ G NLY+K+
Sbjct: 238 AVKAVEGLNGQEMFGVTLQVNRLMSKREKELYNIKKHTEKVEKFAEETNGRNLYVKSFSK 297
Query: 322 SIDDEKLKELFSEFGTITSCKVMRDP-SGISKGSGFVAFSTPEEASRALAEMNGKMIVSK 380
+ D++ +E FS+FG I K+ R P + SKG GFV + + E+A A+ + +
Sbjct: 298 DVTDKEFQEYFSKFGEIELFKIERVPETKESKGFGFVLYKSKEDAQNAIEMAMLERLHGD 357
Query: 381 PLYVAVAQRKEERRARLQAQFSQMRPVAM 409
YV Q K R++ + + RP A+
Sbjct: 358 LPYVGFFQTKAAHE-RVKVKNTHPRPSAV 385
>gi|401827787|ref|XP_003888186.1| polyadenylate-binding protein [Encephalitozoon hellem ATCC 50504]
gi|392999386|gb|AFM99205.1| polyadenylate-binding protein [Encephalitozoon hellem ATCC 50504]
Length = 500
Score = 211 bits (537), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 133/375 (35%), Positives = 207/375 (55%), Gaps = 18/375 (4%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ ++YVGDL DS L+ +FS VG++L++++ + + S + +V + N DA +A+
Sbjct: 13 SLTIYVGDLPPKTIDSDLFRIFSNVGKILNIKLIKRGESAPS--FAFVTFENEEDAEKAV 70
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
L+++ IR+M P TGNIF+KNL +S K L D FS FG I+SCK
Sbjct: 71 REYKHYELHDRQIRVMRKDERPP----ETGNIFVKNLPESFTSKDLDDAFSMFGEIVSCK 126
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAI---DKLNGMLINDKQVFVGHFLRKQER-ETVAI 204
+AT G+SKG+GFVQF+ K SA+ I + LNG+++ ++ V + + ++ E+ +
Sbjct: 127 VATTPQGKSKGYGFVQFKEKRSAKKVIKNFNNLNGLMLGGNKIVVELYNPEMKKGESKKV 186
Query: 205 KTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAK 264
T F N F+KN S +++L + +YG +TS DGK K F F NFE + A
Sbjct: 187 STMFTNCFIKNFPGSVGEKELLDLLEKYGKVTSLCFPTKDDGKPKGFAFANFETHESALN 246
Query: 265 AVEALNGK-KFDDRE-----WYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKN 318
A+ L+G FD+ + +Y+ K QK+ ER + L+ FEQ + + + NLYI N
Sbjct: 247 AINGLHGTFPFDNGKDGGEPFYIQKGQKREERAEVLRKMFEQLSMQGQNYKK--NLYITN 304
Query: 319 LGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIV 378
+ + E+L +F EFG+ITS V D + K ++ +STPEEAS A+ N +
Sbjct: 305 IPEGFGAEELSNIFKEFGSITSMSVGVDGANNQKQYAYICYSTPEEASIAVERGNEIYLD 364
Query: 379 SKPLYVAVAQRKEER 393
L VA + K ER
Sbjct: 365 GNRLQVAYFKNKLER 379
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 145/311 (46%), Gaps = 40/311 (12%)
Query: 109 DPSIR-KSGTGNIFIKNLD-KSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFE 166
D S R KS + I++ +L K+ID L FS+ G IL+ K+ G + F FV FE
Sbjct: 4 DESKRAKSDSLTIYVGDLPPKTIDSD-LFRIFSNVGKILNIKLIKRGE-SAPSFAFVTFE 61
Query: 167 NKESAQNAIDKLNGMLINDKQVFVGHFLRKQER--ETVAIKTKFNNVFVKNLDESTTDED 224
N+E A+ A+ + ++D+Q+ V +RK ER ET N+FVKNL ES T +D
Sbjct: 62 NEEDAEKAVREYKHYELHDRQIRV---MRKDERPPET-------GNIFVKNLPESFTSKD 111
Query: 225 LKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA---LNGKKFDDREWYV 281
L F +G I S V GKSK +GFV F+ A K ++ LNG + V
Sbjct: 112 LDDAFSMFGEIVSCKVATTPQGKSKGYGFVQFKEKRSAKKVIKNFNNLNGLMLGGNKIVV 171
Query: 282 G--KAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTIT 339
+ K +++ F N +IKN S+ +++L +L ++G +T
Sbjct: 172 ELYNPEMKKGESKKVSTMF-------------TNCFIKNFPGSVGEKELLDLLEKYGKVT 218
Query: 340 SCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS------KPLYVAVAQRKEER 393
S G KG F F T E A A+ ++G +P Y+ Q++EER
Sbjct: 219 SLCFPTKDDGKPKGFAFANFETHESALNAINGLHGTFPFDNGKDGGEPFYIQKGQKREER 278
Query: 394 RARLQAQFSQM 404
L+ F Q+
Sbjct: 279 AEVLRKMFEQL 289
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 134/292 (45%), Gaps = 31/292 (10%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
T +++V +L + T L D FS G+++S +V +S GYG+V + A + +
Sbjct: 95 TGNIFVKNLPESFTSKDLDDAFSMFGEIVSCKVA-TTPQGKSKGYGFVQFKEKRSAKKVI 153
Query: 89 DVLNFTPLNNKSI---RIMYSHRDPSIRKSGT-------GNIFIKNLDKSIDHKALHDTF 138
NF LN + +I+ +P ++K + N FIKN S+ K L D
Sbjct: 154 K--NFNNLNGLMLGGNKIVVELYNPEMKKGESKKVSTMFTNCFIKNFPGSVGEKELLDLL 211
Query: 139 SSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLIND------KQVFVGH 192
+G + S T G+ KGF F FE ESA NAI+ L+G D + ++
Sbjct: 212 EKYGKVTSLCFPTKDDGKPKGFAFANFETHESALNAINGLHGTFPFDNGKDGGEPFYIQK 271
Query: 193 FLRKQERETVAIKTKF-----------NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVM 241
+++ER V ++ F N+++ N+ E E+L IF E+G+ITS V
Sbjct: 272 GQKREERAEV-LRKMFEQLSMQGQNYKKNLYITNIPEGFGAEELSNIFKEFGSITSMSVG 330
Query: 242 RDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQE 293
DG K + ++ + ++A+ AVE N D V + K ER +E
Sbjct: 331 VDGANNQKQYAYICYSTPEEASIAVERGNEIYLDGNRLQVAYFKNKLERMKE 382
>gi|440493085|gb|ELQ75593.1| Polyadenylate-binding protein (RRM superfamily), partial
[Trachipleistophora hominis]
Length = 513
Score = 211 bits (537), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 137/376 (36%), Positives = 207/376 (55%), Gaps = 21/376 (5%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCR---DLSTRRSLGYGYVNYANPADAAR 86
++YVGDL +S LY +FS VG ++++++ + D + Y YV ++ +A
Sbjct: 18 CTVYVGDLSLKTVESDLYKIFSTVGSIITIKLVKPVMDNFPNYTTCYAYVLFSQEEEALE 77
Query: 87 ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
A++ LNF +++K +R+M ++ I+ GNI IKNL D K LHDTFS FG ILS
Sbjct: 78 AVNKLNFFKVHDKEMRVMLYDKE-RIKSMDRGNIVIKNLSADCDSKTLHDTFSIFGEILS 136
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERE-TVAIK 205
CK+A + G+ KGFGFVQF+NK A+ A+ M ++ GH ++ ++ E IK
Sbjct: 137 CKVAQNSQGKCKGFGFVQFKNKNGARKALKFGTEMQMD------GHAIKVEKYEKNYKIK 190
Query: 206 T---KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDA 262
T F NVF KN +TT++ LK+IF G ++S DG + FGF N+ENA DA
Sbjct: 191 TGSRAFTNVFFKNFPSTTTEQQLKEIFMSIGKVSSFYFATKPDGGLRGFGFANYENAADA 250
Query: 263 AKAVEALNGKKFDDREW----YVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKN 318
KA++ L+GK + ++ YV +AQ K +R L FE+ ++ NLY+
Sbjct: 251 QKAIDELSGKDIFEGKYPEPFYVQQAQTKQQRLDSLSSAFEKLSMSGLN--YKRNLYVTR 308
Query: 319 LGDSIDDEKLKELFSEFGTITSCKVMRDP-SGISKGSGFVAFSTPEEASRALAEMNGKMI 377
L + E+++ELFS++G I S V +D K +V FST +EAS A+ + N I
Sbjct: 309 LPSTYGKEEVEELFSQYGKIISVCVGKDNVVNEDKNWAYVCFSTADEASIAVEKGNEVYI 368
Query: 378 VSKPLYVAVAQRKEER 393
S + V + K ER
Sbjct: 369 DSVKINVTYFKSKNER 384
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 142/301 (47%), Gaps = 29/301 (9%)
Query: 113 RKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIAT----DGSGQSKGFGFVQFENK 168
+K +++ +L L+ FS+ G+I++ K+ + + + +V F +
Sbjct: 13 KKENNCTVYVGDLSLKTVESDLYKIFSTVGSIITIKLVKPVMDNFPNYTTCYAYVLFSQE 72
Query: 169 ESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKT-KFNNVFVKNLDESTTDEDLKK 227
E A A++KLN ++DK++ V L +ER IK+ N+ +KNL + L
Sbjct: 73 EEALEAVNKLNFFKVHDKEMRV--MLYDKER----IKSMDRGNIVIKNLSADCDSKTLHD 126
Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
F +G I S V ++ GK K FGFV F+N + A KA+ KF G A K
Sbjct: 127 TFSIFGEILSCKVAQNSQGKCKGFGFVQFKNKNGARKAL------KFGTEMQMDGHAIKV 180
Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
+ E+ K +K F N++ KN + +++LKE+F G ++S P
Sbjct: 181 EKYEKNYK------IKTGSRAFT--NVFFKNFPSTTTEQQLKEIFMSIGKVSSFYFATKP 232
Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVS----KPLYVAVAQRKEERRARLQAQFSQ 403
G +G GF + +A +A+ E++GK I +P YV AQ K++R L + F +
Sbjct: 233 DGGLRGFGFANYENAADAQKAIDELSGKDIFEGKYPEPFYVQQAQTKQQRLDSLSSAFEK 292
Query: 404 M 404
+
Sbjct: 293 L 293
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 140/287 (48%), Gaps = 32/287 (11%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++ + +L + L+D FS G++LS +V ++ S + G+G+V + N A +AL
Sbjct: 109 NIVIKNLSADCDSKTLHDTFSIFGEILSCKVAQN-SQGKCKGFGFVQFKNKNGARKALKF 167
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGT---GNIFIKNLDKSIDHKALHDTFSSFGNILSC 147
++ +I++ ++ I K+G+ N+F KN + + L + F S G + S
Sbjct: 168 GTEMQMDGHAIKVEKYEKNYKI-KTGSRAFTNVFFKNFPSTTTEQQLKEIFMSIGKVSSF 226
Query: 148 KIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHF---------LRKQE 198
AT G +GFGF +EN AQ AID+L+G K +F G + KQ+
Sbjct: 227 YFATKPDGGLRGFGFANYENAADAQKAIDELSG-----KDIFEGKYPEPFYVQQAQTKQQ 281
Query: 199 RETVAIKTKFN-----------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGD-G 246
R ++ + F N++V L + E+++++F +YG I S V +D
Sbjct: 282 RLD-SLSSAFEKLSMSGLNYKRNLYVTRLPSTYGKEEVEELFSQYGKIISVCVGKDNVVN 340
Query: 247 KSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQE 293
+ K + +V F AD+A+ AVE N D + V + K+EREQ+
Sbjct: 341 EDKNWAYVCFSTADEASIAVEKGNEVYIDSVKINVTYFKSKNEREQD 387
>gi|147864210|emb|CAN80948.1| hypothetical protein VITISV_016699 [Vitis vinifera]
Length = 183
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 98/131 (74%), Positives = 110/131 (83%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
NQ +TSLYVG L+ NVTDS L+DLF Q+G V+SV++C DLSTRRSL YG VN+ NP D
Sbjct: 13 NQLXSTSLYVGGLESNVTDSHLFDLFGQLGPVVSVQICCDLSTRRSLNYGCVNHGNPQDT 72
Query: 85 ARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNI 144
ARALDVLNFT LN K RIMYSH DPS+RKSGTGNIFIKNLDK +DHKALHDTFS+FGNI
Sbjct: 73 ARALDVLNFTLLNGKPTRIMYSHCDPSVRKSGTGNIFIKNLDKRVDHKALHDTFSAFGNI 132
Query: 145 LSCKIATDGSG 155
LSCK+A D SG
Sbjct: 133 LSCKVAADASG 143
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 63/140 (45%), Gaps = 17/140 (12%)
Query: 211 VFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD-GDGKSKCFGFVNFENADDAAKAVEAL 269
++V L+ + TD L +FG+ G + S + D +S +G VN N D A+A++ L
Sbjct: 20 LYVGGLESNVTDSHLFDLFGQLGPVVSVQICCDLSTRRSLNYGCVNHGNPQDTARALDVL 79
Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLK 329
N + + + +V K N++IKNL +D + L
Sbjct: 80 NFTLLNGKPTRI----------------MYSHCDPSVRKSGTGNIFIKNLDKRVDHKALH 123
Query: 330 ELFSEFGTITSCKVMRDPSG 349
+ FS FG I SCKV D SG
Sbjct: 124 DTFSAFGNILSCKVAADASG 143
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 9/130 (6%)
Query: 120 IFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQ-SKGFGFVQFENKESAQNAIDKL 178
+++ L+ ++ L D F G ++S +I D S + S +G V N + A+D L
Sbjct: 20 LYVGGLESNVTDSHLFDLFGQLGPVVSVQICCDLSTRRSLNYGCVNHGNPQDTARALDVL 79
Query: 179 NGMLINDK--QVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTIT 236
N L+N K ++ H + K+ N+F+KNLD+ + L F +G I
Sbjct: 80 NFTLLNGKPTRIMYSHC------DPSVRKSGTGNIFIKNLDKRVDHKALHDTFSAFGNIL 133
Query: 237 SAVVMRDGDG 246
S V D G
Sbjct: 134 SCKVAADASG 143
>gi|402585898|gb|EJW79837.1| Poly(A) binding protein [Wuchereria bancrofti]
Length = 175
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 98/148 (66%), Positives = 118/148 (79%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL +VT++ L++ FS G VLS+RVCRD TRRSLGY YVN+ PADA RALD
Sbjct: 19 SLYVGDLHPDVTEAMLFEKFSSAGPVLSIRVCRDAITRRSLGYAYVNFQQPADAERALDT 78
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF + K IRIM+S RDPS+R+SG GNIFIKNLDKSID+KA++DTFS FGNILSCK+A
Sbjct: 79 MNFDMMYGKPIRIMWSQRDPSMRRSGAGNIFIKNLDKSIDNKAIYDTFSMFGNILSCKVA 138
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKL 178
D SKG+GFV FE +ESAQ AI+K+
Sbjct: 139 NDEESNSKGYGFVHFETEESAQKAIEKV 166
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 82/153 (53%), Gaps = 5/153 (3%)
Query: 118 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAID 176
++++ +L + L + FSS G +LS ++ D + +S G+ +V F+ A+ A+D
Sbjct: 18 ASLYVGDLHPDVTEAMLFEKFSSAGPVLSIRVCRDAITRRSLGYAYVNFQQPADAERALD 77
Query: 177 KLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTIT 236
+N ++ K + + +R+ ++ N+F+KNLD+S ++ + F +G I
Sbjct: 78 TMNFDMMYGKPIRI----MWSQRDPSMRRSGAGNIFIKNLDKSIDNKAIYDTFSMFGNIL 133
Query: 237 SAVVMRDGDGKSKCFGFVNFENADDAAKAVEAL 269
S V D + SK +GFV+FE + A KA+E +
Sbjct: 134 SCKVANDEESNSKGYGFVHFETEESAQKAIEKV 166
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 77/161 (47%), Gaps = 17/161 (10%)
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENADDAAKAVEA 268
+++V +L T+ L + F G + S V RD +S + +VNF+ DA +A++
Sbjct: 19 SLYVGDLHPDVTEAMLFEKFSSAGPVLSIRVCRDAITRRSLGYAYVNFQQPADAERALDT 78
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
+N + + +Q+ + G N++IKNL SID++ +
Sbjct: 79 MNFDMMYGKPIRIMWSQRDPSMRRSGAG----------------NIFIKNLDKSIDNKAI 122
Query: 329 KELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRAL 369
+ FS FG I SCKV D SKG GFV F T E A +A+
Sbjct: 123 YDTFSMFGNILSCKVANDEESNSKGYGFVHFETEESAQKAI 163
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 313 NLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP-SGISKGSGFVAFSTPEEASRALAE 371
+LY+ +L + + L E FS G + S +V RD + S G +V F P +A RAL
Sbjct: 19 SLYVGDLHPDVTEAMLFEKFSSAGPVLSIRVCRDAITRRSLGYAYVNFQQPADAERALDT 78
Query: 372 MNGKMIVSKPLYVAVAQRKEERR 394
MN M+ KP+ + +QR R
Sbjct: 79 MNFDMMYGKPIRIMWSQRDPSMR 101
>gi|429966446|gb|ELA48443.1| hypothetical protein VCUG_00052 [Vavraia culicis 'floridensis']
Length = 511
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 134/376 (35%), Positives = 208/376 (55%), Gaps = 21/376 (5%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCR---DLSTRRSLGYGYVNYANPADAAR 86
++YVGDL +S LY +FS VG ++++++ + D + Y YV ++ +A
Sbjct: 16 CTVYVGDLSLKAVESDLYKIFSTVGSIITIKLVKPAMDNFPNYTTCYAYVLFSQEEEALE 75
Query: 87 ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
A++ LNF +++K +R+M ++ I+ GNI IKNL D K LHDTFS FG ILS
Sbjct: 76 AVNKLNFFKVHDKEMRVMLYDKE-RIKSMDRGNIVIKNLSADCDSKTLHDTFSIFGEILS 134
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERE-TVAIK 205
CK+A + G+ KGFGFVQF+NK A+ A+ M ++ GH ++ ++ E IK
Sbjct: 135 CKVALNSQGKCKGFGFVQFKNKNGARKALKFGTEMQMD------GHAIKVEKYEKNYKIK 188
Query: 206 T---KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDA 262
T F NVF KN +TT++++K IF G ++S DG + FGF N+ENA DA
Sbjct: 189 TGSRAFTNVFFKNFPLTTTEQEMKDIFMSIGKVSSFYFAAKPDGTLRGFGFANYENATDA 248
Query: 263 AKAVEALNGKKFDDREW----YVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKN 318
+A++ L+GK + ++ YV +AQ K +R L FE+ ++ NLY+
Sbjct: 249 QRAIDELSGKDVFEGKYPEPFYVQQAQTKQQRLDSLSSAFEKLSMSGLN--YKRNLYVTR 306
Query: 319 LGDSIDDEKLKELFSEFGTITSCKVMRDP-SGISKGSGFVAFSTPEEASRALAEMNGKMI 377
L ++ E+++ELFS+FG + S V +D K +V FST +EAS A+ + N I
Sbjct: 307 LPNTYGKEEVQELFSQFGKVISVCVGKDNVVNEDKNWAYVCFSTADEASIAVEKGNEIYI 366
Query: 378 VSKPLYVAVAQRKEER 393
S + + + K ER
Sbjct: 367 DSVKINITYFKSKNER 382
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 142/301 (47%), Gaps = 29/301 (9%)
Query: 113 RKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKI---ATDGS-GQSKGFGFVQFENK 168
+K +++ +L L+ FS+ G+I++ K+ A D + + +V F +
Sbjct: 11 KKENNCTVYVGDLSLKAVESDLYKIFSTVGSIITIKLVKPAMDNFPNYTTCYAYVLFSQE 70
Query: 169 ESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKT-KFNNVFVKNLDESTTDEDLKK 227
E A A++KLN ++DK++ V L +ER IK+ N+ +KNL + L
Sbjct: 71 EEALEAVNKLNFFKVHDKEMRV--MLYDKER----IKSMDRGNIVIKNLSADCDSKTLHD 124
Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
F +G I S V + GK K FGFV F+N + A KA+ KF G A K
Sbjct: 125 TFSIFGEILSCKVALNSQGKCKGFGFVQFKNKNGARKAL------KFGTEMQMDGHAIKV 178
Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
+ E+ K +K F N++ KN + ++++K++F G ++S P
Sbjct: 179 EKYEKNYK------IKTGSRAFT--NVFFKNFPLTTTEQEMKDIFMSIGKVSSFYFAAKP 230
Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVS----KPLYVAVAQRKEERRARLQAQFSQ 403
G +G GF + +A RA+ E++GK + +P YV AQ K++R L + F +
Sbjct: 231 DGTLRGFGFANYENATDAQRAIDELSGKDVFEGKYPEPFYVQQAQTKQQRLDSLSSAFEK 290
Query: 404 M 404
+
Sbjct: 291 L 291
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 138/287 (48%), Gaps = 32/287 (11%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++ + +L + L+D FS G++LS +V + S + G+G+V + N A +AL
Sbjct: 107 NIVIKNLSADCDSKTLHDTFSIFGEILSCKVALN-SQGKCKGFGFVQFKNKNGARKALKF 165
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGT---GNIFIKNLDKSIDHKALHDTFSSFGNILSC 147
++ +I++ ++ I K+G+ N+F KN + + + D F S G + S
Sbjct: 166 GTEMQMDGHAIKVEKYEKNYKI-KTGSRAFTNVFFKNFPLTTTEQEMKDIFMSIGKVSSF 224
Query: 148 KIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHF---------LRKQE 198
A G +GFGF +EN AQ AID+L+G K VF G + KQ+
Sbjct: 225 YFAAKPDGTLRGFGFANYENATDAQRAIDELSG-----KDVFEGKYPEPFYVQQAQTKQQ 279
Query: 199 RETVAIKTKFN-----------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGD-G 246
R ++ + F N++V L + E+++++F ++G + S V +D
Sbjct: 280 RLD-SLSSAFEKLSMSGLNYKRNLYVTRLPNTYGKEEVQELFSQFGKVISVCVGKDNVVN 338
Query: 247 KSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQE 293
+ K + +V F AD+A+ AVE N D + + + K+EREQ+
Sbjct: 339 EDKNWAYVCFSTADEASIAVEKGNEIYIDSVKINITYFKSKNEREQD 385
>gi|300707142|ref|XP_002995792.1| hypothetical protein NCER_101231 [Nosema ceranae BRL01]
gi|239605007|gb|EEQ82121.1| hypothetical protein NCER_101231 [Nosema ceranae BRL01]
Length = 508
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 143/412 (34%), Positives = 224/412 (54%), Gaps = 35/412 (8%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
N + ++YVGDL +S L+ +FS +G+V+ +++ + + S + +V +AN A
Sbjct: 7 NNEIFATIYVGDLSSKTLESDLFRIFSSIGEVVKIKLKKRIEPLSS--FAFVTFANGDAA 64
Query: 85 ARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNI 144
RA+ N LN K+IR++ + S R+ N+ +KNL S ++ L+DTFS FG I
Sbjct: 65 DRAIKEYNNFRLNKKNIRVLPCMDEKSKREDA--NLIVKNLPSSFTNENLYDTFSVFGTI 122
Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDK----QVFVGHFLRKQERE 200
+S KIAT G+ K +GFVQF+ K+SA+ AI +G +++K ++F RKQE +
Sbjct: 123 ISAKIATYADGKPKNYGFVQFDKKKSAKMAIKHCDGGKLDNKIIQVEIFDKEKRRKQEEQ 182
Query: 201 T-----VAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVV-MRDGDGKSKCFGFV 254
V ++ KF N F+KN ES T++DL+ + +YG ITS ++DG SK F F
Sbjct: 183 ALENKPVKLEPKFTNCFIKNFPESFTEKDLESLLNKYGNITSIYFPLKDGTFVSKGFAFA 242
Query: 255 NFENADDAAKAVEALNGKK---FDDREW-------YVGKAQKKSEREQELKGQFEQAMKE 304
NFE+ + A A++ L+GK+ F++ + Y+ KAQKK ERE+ LK FEQ E
Sbjct: 243 NFESHESAQNAIQELHGKQIFPFEENSYTTKLEPFYIQKAQKKEEREEYLKRSFEQLSLE 302
Query: 305 TVDKFQGL--NLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTP 362
Q + NLYI N+ I+ + + E+FSEFG+I S + D + +V +ST
Sbjct: 303 G----QNIKRNLYITNIPAFIEKDDIFEIFSEFGSIVSFSIGIDAVNEQRKYAYVCYSTS 358
Query: 363 EEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVP 414
+EA A+ + N I + L V + K ER M + + +VP
Sbjct: 359 DEAFIAIEKGNELFIDNNKLNVTYFKNKAERTKE-----KMMSSININSTVP 405
>gi|380799249|gb|AFE71500.1| polyadenylate-binding protein 5, partial [Macaca mulatta]
Length = 256
Score = 208 bits (530), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 121/254 (47%), Positives = 171/254 (67%), Gaps = 7/254 (2%)
Query: 139 SSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQE 198
S+FGNILSCK+ D +G SKG+ +V F++ +A AI +NG+ +N++QV+VG F +E
Sbjct: 1 SAFGNILSCKVVCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEE 59
Query: 199 RETVAIKTK----FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFV 254
R ++T+ F NVFVKN+ + DE LK++F EYG S V+RD GKSK FGFV
Sbjct: 60 R-AAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFV 118
Query: 255 NFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNL 314
+E + A KAV L+GK D + YVG+AQKK ER EL+ +FE+ + + G+ +
Sbjct: 119 RYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPI 178
Query: 315 YIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNG 374
YIKNL ++I+DEKLKE FS FG+I+ KVM + G KG G V FS+ EEA++A+ EMNG
Sbjct: 179 YIKNLDETINDEKLKEEFSSFGSISRAKVMMEV-GQGKGFGVVCFSSFEEATKAVDEMNG 237
Query: 375 KMIVSKPLYVAVAQ 388
+++ SKPL+V + Q
Sbjct: 238 RVVGSKPLHVTLGQ 251
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 141/260 (54%), Gaps = 26/260 (10%)
Query: 51 SQVGQVLSVRV-CRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI----MY 105
S G +LS +V C D ++ GY YV++ + A A RA+ +N LNN+ + +
Sbjct: 1 SAFGNILSCKVVCDDNGSK---GYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFP 57
Query: 106 SHRDPSIR---KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGF 162
R +R ++ N+F+KN+ ID + L + F +G S K+ D SG+SKGFGF
Sbjct: 58 EERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGF 117
Query: 163 VQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNN------------ 210
V++E E+AQ A+ L+G I+ K ++VG +K ER +
Sbjct: 118 VRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVP 177
Query: 211 VFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALN 270
+++KNLDE+ DE LK+ F +G+I+ A VM + G+ K FG V F + ++A KAV+ +N
Sbjct: 178 IYIKNLDETINDEKLKEEFSSFGSISRAKVMME-VGQGKGFGVVCFSSFEEATKAVDEMN 236
Query: 271 GKKFDDREWYV--GKAQKKS 288
G+ + +V G+A+++
Sbjct: 237 GRVVGSKPLHVTLGQARRRC 256
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 113/189 (59%), Gaps = 12/189 (6%)
Query: 232 YGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSERE 291
+G I S V+ D +G SK + +V+F++ A +A+ +NG + ++R+ YVG+ + ER
Sbjct: 3 FGNILSCKVVCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERA 61
Query: 292 QELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGIS 351
E++ T D+ N+++KN+GD IDDEKLKELF E+G S KV+RD SG S
Sbjct: 62 AEVR---------TRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKS 112
Query: 352 KGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGP 411
KG GFV + T E A +A+ +++GK I K LYV AQ+K ER A L+ R
Sbjct: 113 KGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRR--RFERLRLKEK 170
Query: 412 SVPPRMPMY 420
S PP +P+Y
Sbjct: 171 SRPPGVPIY 179
>gi|14906166|gb|AAK72507.1| putative polyadenylate-binding protein [Aedes aegypti]
Length = 289
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 121/243 (49%), Positives = 161/243 (66%), Gaps = 22/243 (9%)
Query: 208 FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVE 267
F NV+VK+ + DE LK++F +YGTITS VM DGK + FGFV FEN + A AV+
Sbjct: 6 FTNVYVKDFGDELNDETLKEMFEKYGTITSHRVMIK-DGKGRGFGFVAFENPESAEHAVQ 64
Query: 268 ALNGKKFDD-REWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
LNGK+ + + YVG+AQKK+ER+ ELK +FEQ E + ++QG+NLY+KNL DSIDDE
Sbjct: 65 ELNGKELGEGKILYVGRAQKKNERQMELKRRFEQLKMERLTRYQGVNLYVKNLDDSIDDE 124
Query: 327 KLKELFSEFGTITSCKVMRDPSGISKGSGFVAFST-PEEASRALAEMNGKMIVSKPLYVA 385
+L++ FS FGTITS KVM + G SKG GFV FS EEA++A+ EMNG+++ SKPLYVA
Sbjct: 125 RLRKEFSPFGTITSAKVMLE-EGRSKGFGFVLFSQHAEEATKAVTEMNGRIVGSKPLYVA 183
Query: 386 VAQRKEERRARLQAQFSQ----MRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAII 441
+AQR E+R+A L +Q+ Q MR MG ++ PG +G G P +
Sbjct: 184 LAQRTEDRKAHLASQYMQRMANMRMQHMG-------QIFQPGGNG-------GYYVPTLP 229
Query: 442 PPQ 444
PQ
Sbjct: 230 QPQ 232
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 120/199 (60%), Gaps = 18/199 (9%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKL 178
N+++K+ ++ + L + F +G I S ++ G+ +GFGFV FEN ESA++A+ +L
Sbjct: 8 NVYVKDFGDELNDETLKEMFEKYGTITSHRVMIK-DGKGRGFGFVAFENPESAEHAVQEL 66
Query: 179 NGMLIND-KQVFVGHFLRKQERETVAIKTKFN-------------NVFVKNLDESTTDED 224
NG + + K ++VG +K ER+ + +K +F N++VKNLD+S DE
Sbjct: 67 NGKELGEGKILYVGRAQKKNERQ-MELKRRFEQLKMERLTRYQGVNLYVKNLDDSIDDER 125
Query: 225 LKKIFGEYGTITSAVVMRDGDGKSKCFGFVNF-ENADDAAKAVEALNGKKFDDREWYVGK 283
L+K F +GTITSA VM + +G+SK FGFV F ++A++A KAV +NG+ + YV
Sbjct: 126 LRKEFSPFGTITSAKVMLE-EGRSKGFGFVLFSQHAEEATKAVTEMNGRIVGSKPLYVAL 184
Query: 284 AQKKSEREQELKGQFEQAM 302
AQ+ +R+ L Q+ Q M
Sbjct: 185 AQRTEDRKAHLASQYMQRM 203
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 96/194 (49%), Gaps = 27/194 (13%)
Query: 28 LTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARA 87
L T++YV D + D L ++F + G + S RV + + G+G+V + NP A A
Sbjct: 5 LFTNVYVKDFGDELNDETLKEMFEKYGTITSHRVM--IKDGKGRGFGFVAFENPESAEHA 62
Query: 88 LDVLNFTPLNNKSIRIMYSHR--------------------DPSIRKSGTGNIFIKNLDK 127
+ LN L +I+Y R + R G N+++KNLD
Sbjct: 63 VQELNGKELGEG--KILYVGRAQKKNERQMELKRRFEQLKMERLTRYQGV-NLYVKNLDD 119
Query: 128 SIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQF-ENKESAQNAIDKLNGMLINDK 186
SID + L FS FG I S K+ + G+SKGFGFV F ++ E A A+ ++NG ++ K
Sbjct: 120 SIDDERLRKEFSPFGTITSAKVMLE-EGRSKGFGFVLFSQHAEEATKAVTEMNGRIVGSK 178
Query: 187 QVFVGHFLRKQERE 200
++V R ++R+
Sbjct: 179 PLYVALAQRTEDRK 192
>gi|326531316|dbj|BAK05009.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 387
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 141/371 (38%), Positives = 198/371 (53%), Gaps = 51/371 (13%)
Query: 264 KAVEALNGKKFD---DREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
K E+ G ++D + GK+ KK+ER+Q L+ E+ E + K G N+YIKN+
Sbjct: 6 KCQESKRGLEWDRSGSENFVRGKSSKKAERKQYLQLLHEEKRNEIITKSNGSNVYIKNIS 65
Query: 321 DSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSK 380
D +DD+ L+E F+EFG ITS K+MRD GISKG GFV +STP+EA A++ M G M K
Sbjct: 66 DEVDDDTLRERFAEFGNITSVKIMRDDKGISKGFGFVCYSTPDEAKCAVSSMRGVMFYGK 125
Query: 381 PLYVAVAQRKEERRARLQAQFSQMRPVA--MGPSVPPRMP---------MYPPGPS---- 425
PLYVA+AQRKE+R+ARL+ +F+++ +A P +P P +P GPS
Sbjct: 126 PLYVAIAQRKEDRKARLEQRFAELATMAGTASPVIPTGYPHVYFAHPSTHFPQGPSRQGF 185
Query: 426 -----GLGQQFLYGQAPPA-----IIPPQMPPRGHAYRYPLGR---NMQDFPFDMGAGSM 472
GLGQ++ P I P MP YR GR NM FP + S
Sbjct: 186 MYPPIGLGQEWRQNVYPSPHSIQQIHAPLMPNTPRQYRNNRGRMTGNMMTFPHAVNYVSH 245
Query: 473 LPVPVDM----------GAGIPRRDASVGQPM----PITAL----STALANASPEQQRTL 514
D IP S G + PI+++ ++ LA A P+QQR +
Sbjct: 246 PQAAKDFMSMSRQQFGHAKYIPPDVVSNGLAIHHSGPISSVNDSFASLLAAAPPDQQRDM 305
Query: 515 LGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQ 574
LG +YPLVE+ D A+K+TGMLLE+D + +L +L S + L AKV E ++ L+ QQ
Sbjct: 306 LGNRIYPLVERYHPDLASKITGMLLELDTSYLLSMLNSQDTLAAKVNECVQALQ--GQQS 363
Query: 575 ANNPADQLASL 585
N + L +L
Sbjct: 364 TKNKPEDLEAL 374
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 65/108 (60%)
Query: 193 FLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFG 252
L +++R + K+ +NV++KN+ + D+ L++ F E+G ITS +MRD G SK FG
Sbjct: 41 LLHEEKRNEIITKSNGSNVYIKNISDEVDDDTLRERFAEFGNITSVKIMRDDKGISKGFG 100
Query: 253 FVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQ 300
FV + D+A AV ++ G F + YV AQ+K +R+ L+ +F +
Sbjct: 101 FVCYSTPDEAKCAVSSMRGVMFYGKPLYVAIAQRKEDRKARLEQRFAE 148
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 54/93 (58%)
Query: 108 RDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFEN 167
R+ I KS N++IKN+ +D L + F+ FGNI S KI D G SKGFGFV +
Sbjct: 47 RNEIITKSNGSNVYIKNISDEVDDDTLRERFAEFGNITSVKIMRDDKGISKGFGFVCYST 106
Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERE 200
+ A+ A+ + G++ K ++V RK++R+
Sbjct: 107 PDEAKCAVSSMRGVMFYGKPLYVAIAQRKEDRK 139
>gi|281340677|gb|EFB16261.1| hypothetical protein PANDA_006204 [Ailuropoda melanoleuca]
Length = 196
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 103/196 (52%), Positives = 140/196 (71%), Gaps = 5/196 (2%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL +VT+ L+ FS VG VLS+R+CRDL TRRSLGY YVN+ ADA +ALD
Sbjct: 3 SLYVGDLSADVTEDLLFKKFSAVGPVLSIRICRDLVTRRSLGYAYVNFLKLADAQKALDT 62
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+NF + K IR+M+S RD +RKSG GN+FIKNLDKSID+K L++ FS+FG ILS K+
Sbjct: 63 MNFDMIKGKPIRLMWSQRDAYLRKSGIGNVFIKNLDKSIDNKTLYEHFSAFGKILSSKVM 122
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK--- 207
+D G S+G+ FV F+N+ +A AI+++NG L+ D ++FVG F +++RE ++ K
Sbjct: 123 SDDQG-SRGYAFVHFQNQNAADRAIEEMNGALLKDCRLFVGRFKNRKDREA-ELQNKVNE 180
Query: 208 FNNVFVKNLDESTTDE 223
F NV+VKN + DE
Sbjct: 181 FTNVYVKNFGDDMDDE 196
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 115/210 (54%), Gaps = 16/210 (7%)
Query: 118 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATD-GSGQSKGFGFVQFENKESAQNAID 176
++++ +L + L FS+ G +LS +I D + +S G+ +V F AQ A+D
Sbjct: 2 ASLYVGDLSADVTEDLLFKKFSAVGPVLSIRICRDLVTRRSLGYAYVNFLKLADAQKALD 61
Query: 177 KLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTIT 236
+N +I K + L +R+ K+ NVF+KNLD+S ++ L + F +G I
Sbjct: 62 TMNFDMIKGKPIR----LMWSQRDAYLRKSGIGNVFIKNLDKSIDNKTLYEHFSAFGKIL 117
Query: 237 SAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKG 296
S+ VM D G S+ + FV+F+N + A +A+E +NG D +VG+ + + +RE EL+
Sbjct: 118 SSKVMSDDQG-SRGYAFVHFQNQNAADRAIEEMNGALLKDCRLFVGRFKNRKDREAELQN 176
Query: 297 QFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
+ V++F N+Y+KN GD +DDE
Sbjct: 177 K--------VNEFT--NVYVKNFGDDMDDE 196
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 100/202 (49%), Gaps = 26/202 (12%)
Query: 211 VFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD-GDGKSKCFGFVNFENADDAAKAVEAL 269
++V +L T++ L K F G + S + RD +S + +VNF DA KA++ +
Sbjct: 4 LYVGDLSADVTEDLLFKKFSAVGPVLSIRICRDLVTRRSLGYAYVNFLKLADAQKALDTM 63
Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKF---QGL-NLYIKNLGDSIDD 325
N FD +KG+ + M D + G+ N++IKNL SID+
Sbjct: 64 N---FD-----------------MIKGKPIRLMWSQRDAYLRKSGIGNVFIKNLDKSIDN 103
Query: 326 EKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVA 385
+ L E FS FG I S KVM D G S+G FV F A RA+ EMNG ++ L+V
Sbjct: 104 KTLYEHFSAFGKILSSKVMSDDQG-SRGYAFVHFQNQNAADRAIEEMNGALLKDCRLFVG 162
Query: 386 VAQRKEERRARLQAQFSQMRPV 407
+ +++R A LQ + ++ V
Sbjct: 163 RFKNRKDREAELQNKVNEFTNV 184
>gi|296081049|emb|CBI18330.3| unnamed protein product [Vitis vinifera]
Length = 145
Score = 203 bits (516), Expect = 2e-49, Method: Composition-based stats.
Identities = 95/136 (69%), Positives = 108/136 (79%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
NQ ++TSLYVG L+ NVTDS L+DLF Q+G V+SV++C DLSTRRSL YG VN+ NP D
Sbjct: 10 NQLVSTSLYVGGLESNVTDSHLFDLFGQLGPVVSVQICCDLSTRRSLNYGCVNHGNPQDT 69
Query: 85 ARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNI 144
RALDVLNFT LN K RIMYSH DPS+RKSGT NIFIKNLDK +DHKAL DTFS+FGNI
Sbjct: 70 VRALDVLNFTHLNGKPTRIMYSHCDPSVRKSGTRNIFIKNLDKRVDHKALRDTFSTFGNI 129
Query: 145 LSCKIATDGSGQSKGF 160
SCK+A D SG G
Sbjct: 130 FSCKVAADASGSYSGL 145
Score = 60.1 bits (144), Expect = 3e-06, Method: Composition-based stats.
Identities = 41/145 (28%), Positives = 66/145 (45%), Gaps = 17/145 (11%)
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD-GDGKSKCFGFVNFENADDAAKAVEA 268
+++V L+ + TD L +FG+ G + S + D +S +G VN N D +A++
Sbjct: 16 SLYVGGLESNVTDSHLFDLFGQLGPVVSVQICCDLSTRRSLNYGCVNHGNPQDTVRALDV 75
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
LN + + + + +V K N++IKNL +D + L
Sbjct: 76 LNFTHLNGKPTRIMYSH----------------CDPSVRKSGTRNIFIKNLDKRVDHKAL 119
Query: 329 KELFSEFGTITSCKVMRDPSGISKG 353
++ FS FG I SCKV D SG G
Sbjct: 120 RDTFSTFGNIFSCKVAADASGSYSG 144
Score = 50.4 bits (119), Expect = 0.003, Method: Composition-based stats.
Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 5/129 (3%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATD-GSGQSKGFGFVQFENKESAQNAIDK 177
++++ L+ ++ L D F G ++S +I D + +S +G V N + A+D
Sbjct: 16 SLYVGGLESNVTDSHLFDLFGQLGPVVSVQICCDLSTRRSLNYGCVNHGNPQDTVRALDV 75
Query: 178 LNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITS 237
LN +N K + + + K+ N+F+KNLD+ + L+ F +G I S
Sbjct: 76 LNFTHLNGKPTRIMY----SHCDPSVRKSGTRNIFIKNLDKRVDHKALRDTFSTFGNIFS 131
Query: 238 AVVMRDGDG 246
V D G
Sbjct: 132 CKVAADASG 140
>gi|106879567|emb|CAJ38367.1| polyA-binding protein [Plantago major]
Length = 314
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 103/146 (70%), Positives = 121/146 (82%), Gaps = 2/146 (1%)
Query: 448 RGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALSTALANAS 507
RG YR+P GRN+ D P M G M VP DM +PR A++ QPMP+TAL++ALANA+
Sbjct: 171 RGRMYRFPPGRNVPDVP--MTGGGMFSVPYDMTGMLPRDAAAIPQPMPVTALASALANAT 228
Query: 508 PEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVL 567
PEQQRT+LGE+LYPLV+QLE + AAKVTGMLLEMDQTEVLHLLESP+ALK+KV EAMEVL
Sbjct: 229 PEQQRTMLGENLYPLVDQLEHEHAAKVTGMLLEMDQTEVLHLLESPDALKSKVNEAMEVL 288
Query: 568 RSVAQQQANNPADQLASLSLNENLVS 593
R+V QQ N+PADQLASLSLN+NLVS
Sbjct: 289 RNVQQQGNNSPADQLASLSLNDNLVS 314
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 90/108 (83%), Positives = 100/108 (92%)
Query: 337 TITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRAR 396
TITSCKVMRDPSGIS+GSGFVAFSTPEE++RAL+EMNGKM++SKPLYVA+AQRKEERRAR
Sbjct: 1 TITSCKVMRDPSGISRGSGFVAFSTPEESARALSEMNGKMVISKPLYVALAQRKEERRAR 60
Query: 397 LQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPPQ 444
LQAQFSQMRPVAM PS+ PRMPMYPPG G+GQQ YGQ PPA+IP Q
Sbjct: 61 LQAQFSQMRPVAMPPSIAPRMPMYPPGAPGIGQQLFYGQGPPAMIPSQ 108
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 40/67 (59%)
Query: 234 TITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQE 293
TITS VMRD G S+ GFV F +++A+A+ +NGK + YV AQ+K ER
Sbjct: 1 TITSCKVMRDPSGISRGSGFVAFSTPEESARALSEMNGKMVISKPLYVALAQRKEERRAR 60
Query: 294 LKGQFEQ 300
L+ QF Q
Sbjct: 61 LQAQFSQ 67
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%)
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER 199
I SCK+ D SG S+G GFV F E + A+ ++NG ++ K ++V RK+ER
Sbjct: 1 TITSCKVMRDPSGISRGSGFVAFSTPEESARALSEMNGKMVISKPLYVALAQRKEER 57
>gi|160331003|ref|XP_001712209.1| pab1 [Hemiselmis andersenii]
gi|159765656|gb|ABW97884.1| pab1 [Hemiselmis andersenii]
Length = 502
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 111/275 (40%), Positives = 176/275 (64%), Gaps = 6/275 (2%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+T LYVGDL N+ + + +F +G + SV++ RD+S+ +GY +V + N DA RAL
Sbjct: 39 STCLYVGDLPLNLKEEDIEKIFLTIGPLKSVKIYRDISSGEFMGYCFVEFENFKDAERAL 98
Query: 89 DVLN--FTPLN-NKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNIL 145
LN F P K +R+M+ +D + KSG GNIFIKNL D K+L F FG IL
Sbjct: 99 TKLNYYFDPEKMKKPLRLMWYQKDKFLLKSGGGNIFIKNLPLFFDSKSLEKMFLDFGKIL 158
Query: 146 SCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAI- 204
SCK+A D +G S G+GFV FE++++++ AI+K NG++I +K++FVG FL +++R+ +
Sbjct: 159 SCKVALDENGTSLGYGFVHFEDEKASKIAIEKTNGLIIGEKKIFVGPFLSRKDRKNFGMT 218
Query: 205 KTKFNNVFVKNLD-ESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAA 263
KT F N+++KN+ E+ + +K +F +G ITS + ++ + +K F FVN+E ++A
Sbjct: 219 KTGFTNIYIKNISPENCNETFIKDLFDIFGKITSIYIPKNNNF-TKGFAFVNYELPEEAE 277
Query: 264 KAVEALNGKKFDDREWYVGKAQKKSEREQELKGQF 298
A+ +N KK + YVGKA+ K ER++ L+ +F
Sbjct: 278 DAIFRMNKKKIKNLTLYVGKAETKIERQRHLQKKF 312
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 157/305 (51%), Gaps = 32/305 (10%)
Query: 120 IFIKNLDKSIDHKALHDTFSSFGNILSCKIATD-GSGQSKGFGFVQFENKESAQNAIDKL 178
+++ +L ++ + + F + G + S KI D SG+ G+ FV+FEN + A+ A+ KL
Sbjct: 42 LYVGDLPLNLKEEDIEKIFLTIGPLKSVKIYRDISSGEFMGYCFVEFENFKDAERALTKL 101
Query: 179 NGMLINDKQVFVGHFLRKQERETVAIKTKF------NNVFVKNLDESTTDEDLKKIFGEY 232
N +K ++K R K KF N+F+KNL + L+K+F ++
Sbjct: 102 NYYFDPEK-------MKKPLRLMWYQKDKFLLKSGGGNIFIKNLPLFFDSKSLEKMFLDF 154
Query: 233 GTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQ 292
G I S V D +G S +GFV+FE+ + A+E NG +++ +VG + +R+
Sbjct: 155 GKILSCKVALDENGTSLGYGFVHFEDEKASKIAIEKTNGLIIGEKKIFVGPFLSRKDRKN 214
Query: 293 ELKGQFEQAMKETVDKFQGL-NLYIKNLG-DSIDDEKLKELFSEFGTITSCKVMRDPSGI 350
M +T G N+YIKN+ ++ ++ +K+LF FG ITS + ++ +
Sbjct: 215 -------FGMTKT-----GFTNIYIKNISPENCNETFIKDLFDIFGKITSIYIPKN-NNF 261
Query: 351 SKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMG 410
+KG FV + PEEA A+ MN K I + LYV A+ K ER+ LQ +F + + +G
Sbjct: 262 TKGFAFVNYELPEEAEDAIFRMNKKKIKNLTLYVGKAETKIERQRHLQKKFLEKK---IG 318
Query: 411 PSVPP 415
P P
Sbjct: 319 PIEKP 323
>gi|402697293|gb|AFQ90834.1| polyA-binding protein cytoplasmic 1, partial [Oscaecilia
ochrocephala]
Length = 177
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 102/178 (57%), Positives = 134/178 (75%), Gaps = 3/178 (1%)
Query: 123 KNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGML 182
KNLDKSID+KAL+DTFS+FGNILSCK+ D +G SKG+GFV FE +E+A+ AI+K+NGML
Sbjct: 1 KNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVXFETQEAAERAIEKMNGML 59
Query: 183 INDKQVFVGHFLRKQERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVV 240
+ND++VFVG F ++ERE A +F NV++KN E DE LK++FG+YG S V
Sbjct: 60 LNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKEVFGKYGPALSVKV 119
Query: 241 MRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQF 298
M D GKSK FGFV+FE +DA KAV+ +NGK+ + + YVG+AQKK ER+ ELK +F
Sbjct: 120 MTDESGKSKGFGFVSFERHEDAQKAVDXMNGKELNGKXIYVGRAQKKVERQTELKRKF 177
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/188 (42%), Positives = 116/188 (61%), Gaps = 11/188 (5%)
Query: 214 KNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKK 273
KNLD+S ++ L F +G I S V+ D +G SK +GFV FE + A +A+E +NG
Sbjct: 1 KNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVXFETQEAAERAIEKMNGML 59
Query: 274 FDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFS 333
+DR+ +VG+ + + ERE EL + ++ N+YIKN G+ +DDE+LKE+F
Sbjct: 60 LNDRKVFVGRFKSRKEREAELGARAKEFT----------NVYIKNFGEDMDDERLKEVFG 109
Query: 334 EFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEER 393
++G S KVM D SG SKG GFV+F E+A +A+ MNGK + K +YV AQ+K ER
Sbjct: 110 KYGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDXMNGKELNGKXIYVGRAQKKVER 169
Query: 394 RARLQAQF 401
+ L+ +F
Sbjct: 170 QTELKRKF 177
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 102/179 (56%), Gaps = 9/179 (5%)
Query: 36 DLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTP 95
+LD ++ + LYD FS G +LS +V D + S GYG+V + A RA++ +N
Sbjct: 2 NLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVXFETQEAAERAIEKMNGML 59
Query: 96 LNNKSIRI----MYSHRDPSI--RKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKI 149
LN++ + + R+ + R N++IKN + +D + L + F +G LS K+
Sbjct: 60 LNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKEVFGKYGPALSVKV 119
Query: 150 ATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKF 208
TD SG+SKGFGFV FE E AQ A+D +NG +N K ++VG +K ER+T +K KF
Sbjct: 120 MTDESGKSKGFGFVSFERHEDAQKAVDXMNGKELNGKXIYVGRAQKKVERQT-ELKRKF 177
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 58/93 (62%), Gaps = 1/93 (1%)
Query: 317 KNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKM 376
KNL SID++ L + FS FG I SCKV+ D +G SKG GFV F T E A RA+ +MNG +
Sbjct: 1 KNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVXFETQEAAERAIEKMNGML 59
Query: 377 IVSKPLYVAVAQRKEERRARLQAQFSQMRPVAM 409
+ + ++V + ++ER A L A+ + V +
Sbjct: 60 LNDRKVFVGRFKSRKEREAELGARAKEFTNVYI 92
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 49/83 (59%), Gaps = 3/83 (3%)
Query: 21 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYAN 80
GA +F T++Y+ + ++ D +L ++F + G LSV+V D S +S G+G+V++
Sbjct: 81 GARAKEF--TNVYIKNFGEDMDDERLKEVFGKYGPALSVKVMTDESG-KSKGFGFVSFER 137
Query: 81 PADAARALDVLNFTPLNNKSIRI 103
DA +A+D +N LN K I +
Sbjct: 138 HEDAQKAVDXMNGKELNGKXIYV 160
>gi|340546029|gb|AEK51813.1| cytoplasmic poly(A) binding protein 1 [Alligator mississippiensis]
gi|402697275|gb|AFQ90825.1| polyA-binding protein cytoplasmic 1, partial [Anniella pulchra]
gi|402697277|gb|AFQ90826.1| polyA-binding protein cytoplasmic 1, partial [Chelydra serpentina]
gi|402697281|gb|AFQ90828.1| polyA-binding protein cytoplasmic 1, partial [Cyrtodactylus sp.
JJF-2012]
gi|402697287|gb|AFQ90831.1| polyA-binding protein cytoplasmic 1, partial [Draco beccarii]
gi|402697289|gb|AFQ90832.1| polyA-binding protein cytoplasmic 1, partial [Draco sumatranus]
Length = 177
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 101/178 (56%), Positives = 135/178 (75%), Gaps = 3/178 (1%)
Query: 123 KNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGML 182
KNLDKSID+KAL+DTFS+FGNILSCK+ D +G SKG+GFV FE +E+A+ AI+K+NGML
Sbjct: 1 KNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGML 59
Query: 183 INDKQVFVGHFLRKQERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVV 240
+ND++VFVG F ++ERE A +F NV++KN E DE LK++FG++G S V
Sbjct: 60 LNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKV 119
Query: 241 MRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQF 298
M D GKSK FGFV+FE +DA KAV+ +NGK+ + ++ YVG+AQKK ER+ ELK +F
Sbjct: 120 MTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKF 177
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 82/188 (43%), Positives = 118/188 (62%), Gaps = 11/188 (5%)
Query: 214 KNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKK 273
KNLD+S ++ L F +G I S V+ D +G SK +GFV+FE + A +A+E +NG
Sbjct: 1 KNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGML 59
Query: 274 FDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFS 333
+DR+ +VG+ + + ERE EL + ++ N+YIKN G+ +DDE+LKELF
Sbjct: 60 LNDRKVFVGRFKSRKEREAELGARAKEFT----------NVYIKNFGEDMDDERLKELFG 109
Query: 334 EFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEER 393
+FG S KVM D SG SKG GFV+F E+A +A+ EMNGK + K +YV AQ+K ER
Sbjct: 110 KFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVER 169
Query: 394 RARLQAQF 401
+ L+ +F
Sbjct: 170 QTELKRKF 177
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 105/179 (58%), Gaps = 9/179 (5%)
Query: 36 DLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTP 95
+LD ++ + LYD FS G +LS +V D + S GYG+V++ A RA++ +N
Sbjct: 2 NLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGML 59
Query: 96 LNNKSIRI----MYSHRDPSI--RKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKI 149
LN++ + + R+ + R N++IKN + +D + L + F FG LS K+
Sbjct: 60 LNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKV 119
Query: 150 ATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKF 208
TD SG+SKGFGFV FE E AQ A+D++NG +N KQ++VG +K ER+T +K KF
Sbjct: 120 MTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQT-ELKRKF 177
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 58/93 (62%), Gaps = 1/93 (1%)
Query: 317 KNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKM 376
KNL SID++ L + FS FG I SCKV+ D +G SKG GFV F T E A RA+ +MNG +
Sbjct: 1 KNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGML 59
Query: 377 IVSKPLYVAVAQRKEERRARLQAQFSQMRPVAM 409
+ + ++V + ++ER A L A+ + V +
Sbjct: 60 LNDRKVFVGRFKSRKEREAELGARAKEFTNVYI 92
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 49/83 (59%), Gaps = 3/83 (3%)
Query: 21 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYAN 80
GA +F T++Y+ + ++ D +L +LF + G LSV+V D S +S G+G+V++
Sbjct: 81 GARAKEF--TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESG-KSKGFGFVSFER 137
Query: 81 PADAARALDVLNFTPLNNKSIRI 103
DA +A+D +N LN K I +
Sbjct: 138 HEDAQKAVDEMNGKELNGKQIYV 160
>gi|19074720|ref|NP_586226.1| POLYADENYLATE-BINDING PROTEIN 2 [Encephalitozoon cuniculi GB-M1]
gi|74697505|sp|Q8SR30.1|PABP_ENCCU RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|19069362|emb|CAD25830.1| POLYADENYLATE-BINDING PROTEIN 2 [Encephalitozoon cuniculi GB-M1]
Length = 502
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 135/379 (35%), Positives = 203/379 (53%), Gaps = 25/379 (6%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ ++YVG+L DS L+ +FS VG+VLSV++ + S + +V + N DA RA+
Sbjct: 13 SLTIYVGELSPKTLDSDLFRVFSNVGKVLSVKLIKRAEPVSS--FAFVTFENEEDAERAI 70
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
L+N+ IR+M P TGNIF+KNL + K L D FS FG I+SCK
Sbjct: 71 REYKHYELHNRQIRVMKKDERPP----ETGNIFVKNLPEDFTGKDLDDAFSMFGEIVSCK 126
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAI---DKLNGMLINDKQVFVGHF---LRKQERETV 202
+AT G+SKG+GFVQF+ K++A+ I L+G+L+ ++ V + ++K E +
Sbjct: 127 VATTSHGKSKGYGFVQFKEKKAAKKVIKNFSSLDGLLLGGNRIVVELYNPEIKKGESKKT 186
Query: 203 AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDA 262
+ F N F+KN ++ +L ++ YG +TS +GK K F F NFEN + A
Sbjct: 187 S--ATFTNCFIKNFPFDASEAELLELLERYGKVTSLFFPVKDNGKPKGFAFANFENHESA 244
Query: 263 AKAVEALN-------GKKFDDREWYVGKAQKKSEREQELKGQFEQ-AMKETVDKFQGLNL 314
A++ L+ G+ +Y+ K Q+K ER +EL+ FEQ +M+ K NL
Sbjct: 245 LNAIKNLHGTFPFGAGRDGTGEAFYIQKGQRKEERAEELRKMFEQMSMQGQSYK---KNL 301
Query: 315 YIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNG 374
YI N+ + E+L +F EFG ITS V D + K ++ +STPEEAS A+ N
Sbjct: 302 YITNIPEGFGCEELGSIFKEFGNITSISVGVDGANSQKQYAYICYSTPEEASIAVERGNE 361
Query: 375 KMIVSKPLYVAVAQRKEER 393
+ L VA + K ER
Sbjct: 362 IYLDGNRLQVAYFKNKLER 380
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 133/292 (45%), Gaps = 30/292 (10%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
T +++V +L + T L D FS G+++S +V S +S GYG+V + A + +
Sbjct: 95 TGNIFVKNLPEDFTGKDLDDAFSMFGEIVSCKVA-TTSHGKSKGYGFVQFKEKKAAKKVI 153
Query: 89 DVLNFTPLNNKSI---RIMYSHRDPSIRKSGT-------GNIFIKNLDKSIDHKALHDTF 138
NF+ L+ + RI+ +P I+K + N FIKN L +
Sbjct: 154 K--NFSSLDGLLLGGNRIVVELYNPEIKKGESKKTSATFTNCFIKNFPFDASEAELLELL 211
Query: 139 SSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLI-------NDKQVFVG 191
+G + S +G+ KGF F FEN ESA NAI L+G + ++
Sbjct: 212 ERYGKVTSLFFPVKDNGKPKGFAFANFENHESALNAIKNLHGTFPFGAGRDGTGEAFYIQ 271
Query: 192 HFLRKQER--------ETVAIKTKF--NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVM 241
RK+ER E ++++ + N+++ N+ E E+L IF E+G ITS V
Sbjct: 272 KGQRKEERAEELRKMFEQMSMQGQSYKKNLYITNIPEGFGCEELGSIFKEFGNITSISVG 331
Query: 242 RDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQE 293
DG K + ++ + ++A+ AVE N D V + K ER +E
Sbjct: 332 VDGANSQKQYAYICYSTPEEASIAVERGNEIYLDGNRLQVAYFKNKLERMKE 383
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 129/297 (43%), Gaps = 34/297 (11%)
Query: 120 IFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLN 179
I++ L L FS+ G +LS K+ S F FV FEN+E A+ AI +
Sbjct: 16 IYVGELSPKTLDSDLFRVFSNVGKVLSVKLIKRAEPVS-SFAFVTFENEEDAERAIREYK 74
Query: 180 GMLINDKQVFVGHFLRKQER--ETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITS 237
++++Q+ V ++K ER ET N+FVKNL E T +DL F +G I S
Sbjct: 75 HYELHNRQIRV---MKKDERPPET-------GNIFVKNLPEDFTGKDLDDAFSMFGEIVS 124
Query: 238 AVVMRDGDGKSKCFGFVNFENADDAAKAVE---ALNGKKFDDREWYVGKAQKKSEREQEL 294
V GKSK +GFV F+ A K ++ +L+G V + ++ +
Sbjct: 125 CKVATTSHGKSKGYGFVQFKEKKAAKKVIKNFSSLDGLLLGGNRIVVELYNPEIKKGES- 183
Query: 295 KGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGS 354
K+T F N +IKN + +L EL +G +TS +G KG
Sbjct: 184 --------KKTSATFT--NCFIKNFPFDASEAELLELLERYGKVTSLFFPVKDNGKPKGF 233
Query: 355 GFVAFSTPEEASRALAEMNGKMI-------VSKPLYVAVAQRKEERRARLQAQFSQM 404
F F E A A+ ++G + Y+ QRKEER L+ F QM
Sbjct: 234 AFANFENHESALNAIKNLHGTFPFGAGRDGTGEAFYIQKGQRKEERAEELRKMFEQM 290
>gi|449329878|gb|AGE96146.1| polyadenylate-binding protein 2 [Encephalitozoon cuniculi]
Length = 502
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 135/379 (35%), Positives = 203/379 (53%), Gaps = 25/379 (6%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ ++YVG+L DS L+ +FS VG+VLSV++ + S + +V + N DA RA+
Sbjct: 13 SLTIYVGELSPKTLDSDLFRVFSNVGKVLSVKLIKRAEPVSS--FAFVTFENEEDAERAI 70
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
L+N+ IR+M P TGNIF+KNL + K L D FS FG I+SCK
Sbjct: 71 REYKHYELHNRQIRVMKKDERPP----ETGNIFVKNLPEDFTGKDLDDAFSMFGEIVSCK 126
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAI---DKLNGMLINDKQVFVGHF---LRKQERETV 202
+AT G+SKG+GFVQF+ K++A+ I L+G+L+ ++ V + ++K E +
Sbjct: 127 VATTSHGKSKGYGFVQFKEKKAAKKVIKNFSSLDGLLLGGNRIVVELYNPEIKKGESKKT 186
Query: 203 AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDA 262
+ F N F+KN ++ +L ++ YG +TS +GK K F F NFEN + A
Sbjct: 187 S--ATFTNCFIKNFPFDASEAELLELLERYGKVTSLFFPVKDNGKPKGFAFANFENHESA 244
Query: 263 AKAVEALN-------GKKFDDREWYVGKAQKKSEREQELKGQFEQ-AMKETVDKFQGLNL 314
A++ L+ G+ +Y+ K Q+K ER +EL+ FEQ +M+ K NL
Sbjct: 245 LNAIKNLHGTFPFGAGRDGTGEAFYIQKGQRKEERAEELRKMFEQMSMQGQSYK---KNL 301
Query: 315 YIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNG 374
YI N+ + E+L +F EFG ITS V D + K ++ +STPEEAS A+ N
Sbjct: 302 YITNIPEGFGCEELGSIFKEFGNITSISVGVDGANSQKQYAYICYSTPEEASIAVERGNE 361
Query: 375 KMIVSKPLYVAVAQRKEER 393
+ L VA + K ER
Sbjct: 362 IYLDGNRLQVAYFKNKLER 380
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 133/292 (45%), Gaps = 30/292 (10%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
T +++V +L + T L D FS G+++S +V S +S GYG+V + A + +
Sbjct: 95 TGNIFVKNLPEDFTGKDLDDAFSMFGEIVSCKVA-TTSHGKSKGYGFVQFKEKKAAKKVI 153
Query: 89 DVLNFTPLNNKSI---RIMYSHRDPSIRKSGT-------GNIFIKNLDKSIDHKALHDTF 138
NF+ L+ + RI+ +P I+K + N FIKN L +
Sbjct: 154 K--NFSSLDGLLLGGNRIVVELYNPEIKKGESKKTSATFTNCFIKNFPFDASEAELLELL 211
Query: 139 SSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLI-------NDKQVFVG 191
+G + S +G+ KGF F FEN ESA NAI L+G + ++
Sbjct: 212 ERYGKVTSLFFPVKDNGKPKGFAFANFENHESALNAIKNLHGTFPFGAGRDGTGEAFYIQ 271
Query: 192 HFLRKQER--------ETVAIKTKF--NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVM 241
RK+ER E ++++ + N+++ N+ E E+L IF E+G ITS V
Sbjct: 272 KGQRKEERAEELRKMFEQMSMQGQSYKKNLYITNIPEGFGCEELGSIFKEFGNITSISVG 331
Query: 242 RDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQE 293
DG K + ++ + ++A+ AVE N D V + K ER +E
Sbjct: 332 VDGANSQKQYAYICYSTPEEASIAVERGNEIYLDGNRLQVAYFKNKLERMKE 383
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 129/297 (43%), Gaps = 34/297 (11%)
Query: 120 IFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLN 179
I++ L L FS+ G +LS K+ S F FV FEN+E A+ AI +
Sbjct: 16 IYVGELSPKTLDSDLFRVFSNVGKVLSVKLIKRAEPVS-SFAFVTFENEEDAERAIREYK 74
Query: 180 GMLINDKQVFVGHFLRKQER--ETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITS 237
++++Q+ V ++K ER ET N+FVKNL E T +DL F +G I S
Sbjct: 75 HYELHNRQIRV---MKKDERPPET-------GNIFVKNLPEDFTGKDLDDAFSMFGEIVS 124
Query: 238 AVVMRDGDGKSKCFGFVNFENADDAAKAVE---ALNGKKFDDREWYVGKAQKKSEREQEL 294
V GKSK +GFV F+ A K ++ +L+G V + ++ +
Sbjct: 125 CKVATTSHGKSKGYGFVQFKEKKAAKKVIKNFSSLDGLLLGGNRIVVELYNPEIKKGES- 183
Query: 295 KGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGS 354
K+T F N +IKN + +L EL +G +TS +G KG
Sbjct: 184 --------KKTSATFT--NCFIKNFPFDASEAELLELLERYGKVTSLFFPVKDNGKPKGF 233
Query: 355 GFVAFSTPEEASRALAEMNGKMI-------VSKPLYVAVAQRKEERRARLQAQFSQM 404
F F E A A+ ++G + Y+ QRKEER L+ F QM
Sbjct: 234 AFANFENHESALNAIKNLHGTFPFGAGRDGTGEAFYIQKGQRKEERAEELRKMFEQM 290
>gi|414588972|tpg|DAA39543.1| TPA: hypothetical protein ZEAMMB73_983793 [Zea mays]
Length = 246
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 129/248 (52%), Positives = 152/248 (61%), Gaps = 61/248 (24%)
Query: 404 MRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPA-------------IIP-------- 442
MRPVAM PSV PRMPM+PPG G+GQQ YGQ PPA ++P
Sbjct: 1 MRPVAMAPSVGPRMPMFPPGVPGVGQQLFYGQPPPAFINPQAGFAFQQPLMPGMRPGGPM 60
Query: 443 -------------PQMP---------------------PRG-HAYRYPLGRNMQDFPFDM 467
PQ P PRG YRYP GR M D P
Sbjct: 61 PNFMMPMVQQGQQPQRPAGRRAGGMQQPMPMGGQQQVFPRGGRGYRYPTGRGMPD-PGMH 119
Query: 468 GAGSMLPVPVDMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLE 527
G+++P +MG G+P R+A+ QP+PI AL+TALANA P+QQR +LGE+LYPLVEQLE
Sbjct: 120 SVGAVMPPSYEMG-GMPMREAAP-QPVPIGALATALANAPPDQQRLMLGENLYPLVEQLE 177
Query: 528 RDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNPA--DQLASL 585
R+ AAKVTGMLLEMDQTEVLHLLESP+ALKAKVAEAMEVLRS Q +N + QLA+L
Sbjct: 178 REQAAKVTGMLLEMDQTEVLHLLESPDALKAKVAEAMEVLRSAQHLQQSNVSTEQQLANL 237
Query: 586 SLNENLVS 593
SLN+ +VS
Sbjct: 238 SLNDGVVS 245
>gi|293335667|ref|NP_001167831.1| uncharacterized protein LOC100381531 [Zea mays]
gi|223944311|gb|ACN26239.1| unknown [Zea mays]
Length = 249
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 128/250 (51%), Positives = 149/250 (59%), Gaps = 62/250 (24%)
Query: 404 MRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAP-----------------PAIIP---- 442
MRPVAM PSV PRMPM+PP G+GQQ YGQ P P + P
Sbjct: 1 MRPVAMAPSVGPRMPMFPPSVPGVGQQLFYGQPPPAFINPQAGFAFQQPMMPGMRPGGPM 60
Query: 443 -------------PQMP-----------------------PRG-HAYRYPLGRNMQDFPF 465
PQ P PRG YRY GR M D P
Sbjct: 61 PNFMMPMVQQGQQPQRPAGRRAGSGGMQQPMPMGSQQQIFPRGGRGYRYATGRGMPD-PG 119
Query: 466 DMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQ 525
G+++P P +MG G+ RDA V QP+PI AL+TALANASP+QQR +LGE+LYPLVEQ
Sbjct: 120 MHNVGAVMPSPYEMG-GMAMRDAGVSQPVPIGALATALANASPDQQRLMLGENLYPLVEQ 178
Query: 526 LERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNPA--DQLA 583
LER+ AAKVTGMLLEMDQTEVLHLLESP+ALKAKVAEAMEVLRS Q +N + QLA
Sbjct: 179 LEREQAAKVTGMLLEMDQTEVLHLLESPDALKAKVAEAMEVLRSAQHLQQSNASTEQQLA 238
Query: 584 SLSLNENLVS 593
+LSLN+ ++S
Sbjct: 239 NLSLNDGVLS 248
>gi|440857933|gb|ELR44433.1| hypothetical protein M91_06292, partial [Bos grunniens mutus]
Length = 149
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 92/150 (61%), Positives = 116/150 (77%), Gaps = 1/150 (0%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL VT++ LY+ FS G +LS+R+CRD TRRSLGY YVNY P DA RAL+
Sbjct: 1 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRLCRDKITRRSLGYAYVNYQQPVDAKRALET 60
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
LNF + + +RIM+S RDPS+RKSG GN+FIKNL K+ID+KAL++ FS+FGNILSCK+A
Sbjct: 61 LNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCKVA 120
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNG 180
D G KG+GFV F+ +ESA+ AID +NG
Sbjct: 121 CDEKG-PKGYGFVHFQKQESAERAIDAMNG 149
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 80/166 (48%), Gaps = 18/166 (10%)
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENADDAAKAVEA 268
+++V +L T+ L + F G I S + RD +S + +VN++ DA +A+E
Sbjct: 1 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRLCRDKITRRSLGYAYVNYQQPVDAKRALET 60
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
LN R + +Q+ + G N++IKNLG +ID++ L
Sbjct: 61 LNFDVIKGRPVRIMWSQRDPSLRKSGVG----------------NVFIKNLGKTIDNKAL 104
Query: 329 KELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNG 374
+FS FG I SCKV D G KG GFV F E A RA+ MNG
Sbjct: 105 YNIFSAFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAIDAMNG 149
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 84/154 (54%), Gaps = 6/154 (3%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDK 177
++++ +L + L++ FS G ILS ++ D + +S G+ +V ++ A+ A++
Sbjct: 1 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRLCRDKITRRSLGYAYVNYQQPVDAKRALET 60
Query: 178 LNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITS 237
LN +I + V + +R+ K+ NVF+KNL ++ ++ L IF +G I S
Sbjct: 61 LNFDVIKGRPVRI----MWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILS 116
Query: 238 AVVMRDGDGKSKCFGFVNFENADDAAKAVEALNG 271
V D G K +GFV+F+ + A +A++A+NG
Sbjct: 117 CKVACDEKG-PKGYGFVHFQKQESAERAIDAMNG 149
Score = 42.7 bits (99), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 313 NLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP-SGISKGSGFVAFSTPEEASRALAE 371
+LY+ +L + + L E FS G I S ++ RD + S G +V + P +A RAL
Sbjct: 1 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRLCRDKITRRSLGYAYVNYQQPVDAKRALET 60
Query: 372 MNGKMIVSKPLYVAVAQRKEERR 394
+N +I +P+ + +QR R
Sbjct: 61 LNFDVIKGRPVRIMWSQRDPSLR 83
>gi|340546031|gb|AEK51814.1| cytoplasmic poly(A) binding protein 1 [Heteronotia binoei]
Length = 177
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 100/178 (56%), Positives = 133/178 (74%), Gaps = 3/178 (1%)
Query: 123 KNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGML 182
KNLDKSID+KAL+DTFS+FGNILSCK+ D +G SKG+GFV FE +E+A+ AI+K+NGML
Sbjct: 1 KNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGML 59
Query: 183 INDKQVFVGHFLRKQERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVV 240
+ND++VFVG F ++ERE A +F NV++KN E DE LK +FG++G S V
Sbjct: 60 LNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKV 119
Query: 241 MRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQF 298
M D GKSK FGFV+FE +DA KAV+ +NGK+ + ++ YVG+AQKK ER+ E K +F
Sbjct: 120 MTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTEXKRKF 177
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 80/188 (42%), Positives = 117/188 (62%), Gaps = 11/188 (5%)
Query: 214 KNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKK 273
KNLD+S ++ L F +G I S V+ D +G SK +GFV+FE + A +A+E +NG
Sbjct: 1 KNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGML 59
Query: 274 FDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFS 333
+DR+ +VG+ + + ERE EL + ++ N+YIKN G+ +DDE+LK+LF
Sbjct: 60 LNDRKVFVGRFKSRKEREAELGARAKEFT----------NVYIKNFGEDMDDERLKDLFG 109
Query: 334 EFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEER 393
+FG S KVM D SG SKG GFV+F E+A +A+ EMNGK + K +YV AQ+K ER
Sbjct: 110 KFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVER 169
Query: 394 RARLQAQF 401
+ + +F
Sbjct: 170 QTEXKRKF 177
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 101/172 (58%), Gaps = 8/172 (4%)
Query: 36 DLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTP 95
+LD ++ + LYD FS G +LS +V D + S GYG+V++ A RA++ +N
Sbjct: 2 NLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGML 59
Query: 96 LNNKSIRI----MYSHRDPSI--RKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKI 149
LN++ + + R+ + R N++IKN + +D + L D F FG LS K+
Sbjct: 60 LNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKV 119
Query: 150 ATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
TD SG+SKGFGFV FE E AQ A+D++NG +N KQ++VG +K ER+T
Sbjct: 120 MTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQT 171
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 58/93 (62%), Gaps = 1/93 (1%)
Query: 317 KNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKM 376
KNL SID++ L + FS FG I SCKV+ D +G SKG GFV F T E A RA+ +MNG +
Sbjct: 1 KNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGML 59
Query: 377 IVSKPLYVAVAQRKEERRARLQAQFSQMRPVAM 409
+ + ++V + ++ER A L A+ + V +
Sbjct: 60 LNDRKVFVGRFKSRKEREAELGARAKEFTNVYI 92
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 3/83 (3%)
Query: 21 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYAN 80
GA +F T++Y+ + ++ D +L DLF + G LSV+V D S +S G+G+V++
Sbjct: 81 GARAKEF--TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESG-KSKGFGFVSFER 137
Query: 81 PADAARALDVLNFTPLNNKSIRI 103
DA +A+D +N LN K I +
Sbjct: 138 HEDAQKAVDEMNGKELNGKQIYV 160
>gi|50545625|ref|XP_500351.1| YALI0B00616p [Yarrowia lipolytica]
gi|49646217|emb|CAG82565.1| YALI0B00616p [Yarrowia lipolytica CLIB122]
Length = 589
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 141/444 (31%), Positives = 209/444 (47%), Gaps = 55/444 (12%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
N T S+YV +L +V+++ L++LF G + +++ RD R LG+ YV + NP A
Sbjct: 14 NTTTTMSIYVANLPGSVSEADLFELFKPHGPLKVIKIPRDPKLRTPLGHAYVTFYNPDHA 73
Query: 85 ARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTG-------------NIFIKNLDKSIDH 131
AL L T L + + + PS S + +F+++ +D
Sbjct: 74 DAALGALKETELGGQQVTCALTEEVPSSASSMSTPPSSAHSPIDPARAVFVRDTRDGVDA 133
Query: 132 KALHDTFSSFGNILSCKIATDGSGQSKG-FGFVQ-FENKESAQNAI-DKLNGMLINDKQV 188
S G + S Q KG FV F E A + D+L + I+ +
Sbjct: 134 ATTKTALESLGAV---------SLQPKGPNAFVAVFPTAEEASKVLSDELANLEISPVR- 183
Query: 189 FVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKS 248
KT F N+FV+ L TT+E L+ F +G +TS ++ D ++
Sbjct: 184 --------------DPKTHFTNLFVRGLSRETTEEALRAEFERFGAVTSLLLPLDESHRA 229
Query: 249 KCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDK 308
K FGFVNFE DA AV AL+G + V +AQ K ER+ ELK +E E +
Sbjct: 230 KGFGFVNFEEHRDAVTAVAALDGAELCGARISVSRAQSKVERQAELKRAYEANRIERLRN 289
Query: 309 FQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRA 368
+G NLYI NL +I++E+L+ FS+FG ITS ++M D G SKG GFV F P+ AS A
Sbjct: 290 ARGTNLYITNLNPAINNERLRAYFSKFGEITSVRIMLDAVGNSKGFGFVCFRDPDHASNA 349
Query: 369 LAEMNGKMIVSKPLYVAVAQRKEERRA------RLQAQFSQMRP-VAMGPSVPPRMPMYP 421
+AEM+ + I L VA+A +K+ + A R P V M +P MPM+
Sbjct: 350 IAEMHNRPIEGNVLQVAIAHKKDPQSAPYSLGKRFPPSVGGAVPVVGMHGGIPGGMPMH- 408
Query: 422 PGPSGLGQQFLYGQAPPAIIPPQM 445
P+ PP ++PP +
Sbjct: 409 SAPN-------MHHVPPHLVPPHL 425
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 40/68 (58%), Gaps = 5/68 (7%)
Query: 512 RTLLGESLYPLVEQL-----ERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEV 566
+ ++GE+LYP+V++ + D A VTG++L+ D ++L LE + L ++ +A +
Sbjct: 511 KEIVGETLYPIVQRHPAIGKDADTTAHVTGIMLQHDNADILSWLEDEQLLNKRIQQASDA 570
Query: 567 LRSVAQQQ 574
R +++
Sbjct: 571 YREWLEER 578
>gi|123407356|ref|XP_001302991.1| Polyadenylate-binding protein [Trichomonas vaginalis G3]
gi|121884332|gb|EAX90061.1| Polyadenylate-binding protein, putative [Trichomonas vaginalis G3]
Length = 477
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 139/407 (34%), Positives = 211/407 (51%), Gaps = 33/407 (8%)
Query: 32 LYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVL 91
++VGDL +V ++ + ++F G S V + +V + + A RA+ +
Sbjct: 8 VFVGDLPGSVDENFIKEIFKDYGSFPSGTVTVKKHKSLDKSFAFVTFESHELAKRAISEV 67
Query: 92 NFTPLNNKSIRIMYSHRDPSIR---KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
N+T L+ IRI++S DP + K+ G +FI+ LD++I+ LHD FS+FG I+SCK
Sbjct: 68 NYTKLDGVPIRILWS--DPGTKRAIKNNVGALFIRGLDENIEVSQLHDAFSNFGEIVSCK 125
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHF---LRKQERETVAIK 205
I +G+S+G+GF+ F ++ A+ A L IN K + + + RK ET
Sbjct: 126 IPLT-NGKSRGYGFITFYKEDDAKRAKTDLADASINGKPIQIEFYQKPTRKNPEET---- 180
Query: 206 TKFNNVFVKNL--DESTTDEDLKKIFGEYGTIT-----SAVVMRDGDGKSKCFGFVNFEN 258
F NVF+K L D TD+DL F E+G + + R DG S FGF NF++
Sbjct: 181 --FTNVFIKPLPADIFKTDDDLANFFKEFGDFVVTGKANPAIKRKEDGSSCEFGFCNFKH 238
Query: 259 ADDAAKAVEALNGKKFDDRE--WYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYI 316
+DA KAV+ALNGK+ + + + +AQ K+ER+ L Q + + ++ +G NLY+
Sbjct: 239 HEDAVKAVDALNGKQHESGKVTFSCCRAQTKAERQAFLAKQSAEFRRRLNEETRGRNLYV 298
Query: 317 KNLGDSIDDEKLKELFSEFGTITSCKVMRDPS--GISKGSGFVAFSTPEEASRALAEMNG 374
KN S+ DE+ KE F +FG + C + R+ SKG GFV F T E A AL
Sbjct: 299 KNFDQSVTDEQFKEYFEQFGEVEKCSIRREAQEPHESKGFGFVLFKTKESAQNALENAVI 358
Query: 375 KMIVSKPLYVAVAQRKEER-RARLQAQFSQMRPVAM------GPSVP 414
+ K Y+ + + KEER R + Q Q AM GP +P
Sbjct: 359 TPLNGKTPYIGLFKMKEEREREKASNQRKQQPKGAMIPNTIGGPVIP 405
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 140/288 (48%), Gaps = 28/288 (9%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
+L++ LD N+ SQL+D FS G+++S ++ L+ +S GYG++ + DA RA
Sbjct: 96 ALFIRGLDENIEVSQLHDAFSNFGEIVSCKI--PLTNGKSRGYGFITFYKEDDAKRAKTD 153
Query: 91 LNFTPLNNKSIRIMYSHRDPSIR--KSGTGNIFIKNLDKSI--DHKALHDTFSSFGNILS 146
L +N K I+I + ++ P+ + + N+FIK L I L + F FG+ +
Sbjct: 154 LADASINGKPIQIEF-YQKPTRKNPEETFTNVFIKPLPADIFKTDDDLANFFKEFGDFVV 212
Query: 147 C-----KIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVG---------- 191
I G S FGF F++ E A A+D LNG +V
Sbjct: 213 TGKANPAIKRKEDGSSCEFGFCNFKHHEDAVKAVDALNGKQHESGKVTFSCCRAQTKAER 272
Query: 192 -HFLRKQE---RETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGD-- 245
FL KQ R + +T+ N++VKN D+S TDE K+ F ++G + + R+
Sbjct: 273 QAFLAKQSAEFRRRLNEETRGRNLYVKNFDQSVTDEQFKEYFEQFGEVEKCSIRREAQEP 332
Query: 246 GKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQE 293
+SK FGFV F+ + A A+E + + Y+G + K ERE+E
Sbjct: 333 HESKGFGFVLFKTKESAQNALENAVITPLNGKTPYIGLFKMKEERERE 380
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 90/183 (49%), Gaps = 17/183 (9%)
Query: 208 FNNVFVKNLDESTTDEDLKKIFGEYGTITS-AVVMRDGDGKSKCFGFVNFENADDAAKAV 266
+ VFV +L S + +K+IF +YG+ S V ++ K F FV FE+ + A +A+
Sbjct: 5 WKEVFVGDLPGSVDENFIKEIFKDYGSFPSGTVTVKKHKSLDKSFAFVTFESHELAKRAI 64
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
+N K D + + ++R A+K V L+I+ L ++I+
Sbjct: 65 SEVNYTKLDGVPIRILWSDPGTKR----------AIKNNVGA-----LFIRGLDENIEVS 109
Query: 327 KLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 386
+L + FS FG I SCK+ +G S+G GF+ F ++A RA ++ I KP+ +
Sbjct: 110 QLHDAFSNFGEIVSCKIPL-TNGKSRGYGFITFYKEDDAKRAKTDLADASINGKPIQIEF 168
Query: 387 AQR 389
Q+
Sbjct: 169 YQK 171
>gi|402697297|gb|AFQ90836.1| polyA-binding protein cytoplasmic 1, partial [Testudo hermanni]
Length = 176
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 99/175 (56%), Positives = 130/175 (74%), Gaps = 3/175 (1%)
Query: 123 KNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGML 182
KNLDKSID+KAL+D FS+FGNILSCK+ D +G SKG+GFV FE +E+A+ AI+K+NGML
Sbjct: 1 KNLDKSIDNKALYDXFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGML 59
Query: 183 INDKQVFVGHFLRKQERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVV 240
+ND++VFVG F ++ERE A +F NV++KN E DE LK++FG +G S V
Sbjct: 60 LNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGXFGPALSVKV 119
Query: 241 MRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELK 295
M D GKSK FGFV+FE +DA KAV +NGK+ + ++ YVG+AQKK ER+ ELK
Sbjct: 120 MTDESGKSKGFGFVSFERHEDAQKAVXEMNGKELNGKQIYVGRAQKKVERQTELK 174
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/185 (43%), Positives = 115/185 (62%), Gaps = 11/185 (5%)
Query: 214 KNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKK 273
KNLD+S ++ L F +G I S V+ D +G SK +GFV+FE + A +A+E +NG
Sbjct: 1 KNLDKSIDNKALYDXFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGML 59
Query: 274 FDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFS 333
+DR+ +VG+ + + ERE EL + ++ N+YIKN G+ +DDE+LKELF
Sbjct: 60 LNDRKVFVGRFKSRKEREAELGARAKEFT----------NVYIKNFGEDMDDERLKELFG 109
Query: 334 EFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEER 393
FG S KVM D SG SKG GFV+F E+A +A+ EMNGK + K +YV AQ+K ER
Sbjct: 110 XFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVXEMNGKELNGKQIYVGRAQKKVER 169
Query: 394 RARLQ 398
+ L+
Sbjct: 170 QTELK 174
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 100/172 (58%), Gaps = 8/172 (4%)
Query: 36 DLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTP 95
+LD ++ + LYD FS G +LS +V D + S GYG+V++ A RA++ +N
Sbjct: 2 NLDKSIDNKALYDXFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGML 59
Query: 96 LNNKSIRI----MYSHRDPSI--RKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKI 149
LN++ + + R+ + R N++IKN + +D + L + F FG LS K+
Sbjct: 60 LNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGXFGPALSVKV 119
Query: 150 ATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
TD SG+SKGFGFV FE E AQ A+ ++NG +N KQ++VG +K ER+T
Sbjct: 120 MTDESGKSKGFGFVSFERHEDAQKAVXEMNGKELNGKQIYVGRAQKKVERQT 171
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 58/93 (62%), Gaps = 1/93 (1%)
Query: 317 KNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKM 376
KNL SID++ L + FS FG I SCKV+ D +G SKG GFV F T E A RA+ +MNG +
Sbjct: 1 KNLDKSIDNKALYDXFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGML 59
Query: 377 IVSKPLYVAVAQRKEERRARLQAQFSQMRPVAM 409
+ + ++V + ++ER A L A+ + V +
Sbjct: 60 LNDRKVFVGRFKSRKEREAELGARAKEFTNVYI 92
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 3/83 (3%)
Query: 21 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYAN 80
GA +F T++Y+ + ++ D +L +LF G LSV+V D S +S G+G+V++
Sbjct: 81 GARAKEF--TNVYIKNFGEDMDDERLKELFGXFGPALSVKVMTDESG-KSKGFGFVSFER 137
Query: 81 PADAARALDVLNFTPLNNKSIRI 103
DA +A+ +N LN K I +
Sbjct: 138 HEDAQKAVXEMNGKELNGKQIYV 160
>gi|402697291|gb|AFQ90833.1| polyA-binding protein cytoplasmic 1, partial [Malaclemys terrapin]
Length = 175
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 99/175 (56%), Positives = 130/175 (74%), Gaps = 3/175 (1%)
Query: 123 KNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGML 182
KNLDKSID+KAL+DTFS+FGNILSCK+ D +G SKG+GFV FE +E+A+ AI+K+NGML
Sbjct: 1 KNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGML 59
Query: 183 INDKQVFVGHFLRKQERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVV 240
+ND++VFVG F ++ERE A +F NV++KN E DE LK++FG S V
Sbjct: 60 LNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGXXXPALSVKV 119
Query: 241 MRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELK 295
M D GKSK FGFV+FE +DA KAV+ +NGK+ + ++ YVG+AQKK ER+ ELK
Sbjct: 120 MTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELK 174
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 113/185 (61%), Gaps = 11/185 (5%)
Query: 214 KNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKK 273
KNLD+S ++ L F +G I S V+ D +G SK +GFV+FE + A +A+E +NG
Sbjct: 1 KNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGML 59
Query: 274 FDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFS 333
+DR+ +VG+ + + ERE EL + ++ N+YIKN G+ +DDE+LKELF
Sbjct: 60 LNDRKVFVGRFKSRKEREAELGARAKEFT----------NVYIKNFGEDMDDERLKELFG 109
Query: 334 EFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEER 393
S KVM D SG SKG GFV+F E+A +A+ EMNGK + K +YV AQ+K ER
Sbjct: 110 XXXPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVER 169
Query: 394 RARLQ 398
+ L+
Sbjct: 170 QTELK 174
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 99/172 (57%), Gaps = 8/172 (4%)
Query: 36 DLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTP 95
+LD ++ + LYD FS G +LS +V D + S GYG+V++ A RA++ +N
Sbjct: 2 NLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGML 59
Query: 96 LNNKSIRI----MYSHRDPSI--RKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKI 149
LN++ + + R+ + R N++IKN + +D + L + F LS K+
Sbjct: 60 LNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGXXXPALSVKV 119
Query: 150 ATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
TD SG+SKGFGFV FE E AQ A+D++NG +N KQ++VG +K ER+T
Sbjct: 120 MTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQT 171
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 58/93 (62%), Gaps = 1/93 (1%)
Query: 317 KNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKM 376
KNL SID++ L + FS FG I SCKV+ D +G SKG GFV F T E A RA+ +MNG +
Sbjct: 1 KNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGML 59
Query: 377 IVSKPLYVAVAQRKEERRARLQAQFSQMRPVAM 409
+ + ++V + ++ER A L A+ + V +
Sbjct: 60 LNDRKVFVGRFKSRKEREAELGARAKEFTNVYI 92
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 3/83 (3%)
Query: 21 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYAN 80
GA +F T++Y+ + ++ D +L +LF LSV+V D S +S G+G+V++
Sbjct: 81 GARAKEF--TNVYIKNFGEDMDDERLKELFGXXXPALSVKVMTDESG-KSKGFGFVSFER 137
Query: 81 PADAARALDVLNFTPLNNKSIRI 103
DA +A+D +N LN K I +
Sbjct: 138 HEDAQKAVDEMNGKELNGKQIYV 160
>gi|387594015|gb|EIJ89039.1| hypothetical protein NEQG_00858 [Nematocida parisii ERTm3]
gi|387595783|gb|EIJ93406.1| hypothetical protein NEPG_01748 [Nematocida parisii ERTm1]
Length = 512
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 116/373 (31%), Positives = 209/373 (56%), Gaps = 18/373 (4%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCR-DLSTRRSLGYGYVNYANPADAARALD 89
++YVGD+ T+S+L+ +FS+VGQ+ ++ + R ++S + Y YV + + + A++
Sbjct: 20 TIYVGDIPMATTESELFQIFSKVGQIYTISILRKEVSIVKDKCYAYVTFFDESSVPIAIE 79
Query: 90 VLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKI 149
NF L+ IR+M +++ S+ + GNI IKNL K D++ L+DTF FG ILSCK+
Sbjct: 80 TFNFYSLHGSQIRVMPFNKE-SVVGNREGNIVIKNLPKETDNQTLYDTFIVFGPILSCKV 138
Query: 150 ATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFL----RKQERETVAIK 205
+ + G G++Q+++ + A+ AI +N +++N K++ + R+++RE VA
Sbjct: 139 VKNNLSECTGVGYIQYKDPKVAEVAIQMINKIVLNGKKLCATQCIPNDKREKKRENVA-- 196
Query: 206 TKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKA 265
F N++VKN T+E+++ EYG +TS + R G+ + F F N++ + AA A
Sbjct: 197 KIFTNIYVKNFPAGITEEEIEAKLKEYGELTSFLAPRTDSGEMRGFAFANYQTHEMAAAA 256
Query: 266 VEALNGKKF-----DDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
+EAL+ K F YV +A+ K+ER +E+ F Q + + N+YI NL
Sbjct: 257 IEALHDKPFPGYPEGTENLYVQRAKLKNERVEEMLEYFSQVPEHERRR----NIYITNLP 312
Query: 321 DSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSK 380
+++E + + FS++G I + K+ D ++ G+V + E+A++A+ N +
Sbjct: 313 GELNEEDVVKYFSKYGPIVTYKLGTDAKN-NRSYGYVFYQKAEDAAKAVELANKSEYCEQ 371
Query: 381 PLYVAVAQRKEER 393
L VA + K+ R
Sbjct: 372 TLDVAFFKCKKLR 384
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 125/272 (45%), Gaps = 26/272 (9%)
Query: 42 TDSQ-LYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKS 100
TD+Q LYD F G +LS +V ++ + G GY+ Y +P A A+ ++N LN K
Sbjct: 118 TDNQTLYDTFIVFGPILSCKVVKN-NLSECTGVGYIQYKDPKVAEVAIQMINKIVLNGK- 175
Query: 101 IRIMYSHRDPSIRKSGT--------GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATD 152
++ + P+ ++ NI++KN I + + +G + S
Sbjct: 176 -KLCATQCIPNDKREKKRENVAKIFTNIYVKNFPAGITEEEIEAKLKEYGELTSFLAPRT 234
Query: 153 GSGQSKGFGFVQFENKESAQNAIDKLN-----GMLINDKQVFVGHFLRKQER-------- 199
SG+ +GF F ++ E A AI+ L+ G + ++V K ER
Sbjct: 235 DSGEMRGFAFANYQTHEMAAAAIEALHDKPFPGYPEGTENLYVQRAKLKNERVEEMLEYF 294
Query: 200 ETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
V + N+++ NL +ED+ K F +YG I + + D ++ +G+V ++ A
Sbjct: 295 SQVPEHERRRNIYITNLPGELNEEDVVKYFSKYGPIVTYKLGTDAKN-NRSYGYVFYQKA 353
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSERE 291
+DAAKAVE N ++ ++ V + K RE
Sbjct: 354 EDAAKAVELANKSEYCEQTLDVAFFKCKKLRE 385
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 91/203 (44%), Gaps = 22/203 (10%)
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDG--KSKCFGFVNFENADDAAK 264
K N ++V ++ +TT+ +L +IF + G I + ++R K KC+ +V F +
Sbjct: 17 KQNTIYVGDIPMATTESELFQIFSKVGQIYTISILRKEVSIVKDKCYAYVTFFDESSVPI 76
Query: 265 AVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSID 324
A+E N + V K+S V +G N+ IKNL D
Sbjct: 77 AIETFNFYSLHGSQIRVMPFNKES----------------VVGNREG-NIVIKNLPKETD 119
Query: 325 DEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYV 384
++ L + F FG I SCKV+++ G G++ + P+ A A+ +N ++ K L
Sbjct: 120 NQTLYDTFIVFGPILSCKVVKNNLSECTGVGYIQYKDPKVAEVAIQMINKIVLNGKKLCA 179
Query: 385 AVA---QRKEERRARLQAQFSQM 404
++E++R + F+ +
Sbjct: 180 TQCIPNDKREKKRENVAKIFTNI 202
>gi|351704535|gb|EHB07454.1| Polyadenylate-binding protein 1 [Heterocephalus glaber]
Length = 281
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 106/207 (51%), Positives = 142/207 (68%), Gaps = 8/207 (3%)
Query: 222 DEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYV 281
DE LK +F S VM D GKSK F FV+FE +DA KAV+ +NGK+ + ++ YV
Sbjct: 3 DERLKDLFR---PALSVKVMTDESGKSKGFRFVSFERHEDAQKAVDEMNGKELNGKQIYV 59
Query: 282 GKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSC 341
G+AQKK E + E K +FEQ ++T+ ++QG+NLY+KNL D IDDE L++ FS FGTITS
Sbjct: 60 GRAQKKVEPQTEPKHKFEQMKQDTITRYQGVNLYVKNLDDGIDDEHLRKEFSPFGTITSA 119
Query: 342 KVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQF 401
KVM + G SKG GFV FS+PEEA++A+ EMNG+ + +KPLYVA+AQ KEE A L +Q+
Sbjct: 120 KVMME-GGRSKGFGFVCFSSPEEATKAVKEMNGRTVATKPLYVALAQLKEESPAHLTSQY 178
Query: 402 SQMRPVAMGPSVPPRM--PMYPPGPSG 426
M+ +A +VP + P P PSG
Sbjct: 179 --MQRMASVRAVPNAVINPYQPAPPSG 203
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 81/187 (43%), Positives = 108/187 (57%), Gaps = 18/187 (9%)
Query: 129 IDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQV 188
+D + L D F LS K+ TD SG+SKGF FV FE E AQ A+D++NG +N KQ+
Sbjct: 1 MDDERLKDLFRP---ALSVKVMTDESGKSKGFRFVSFERHEDAQKAVDEMNGKELNGKQI 57
Query: 189 FVGHFLRKQERETVAIKTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTI 235
+VG +K E +T K KF N++VKNLD+ DE L+K F +GTI
Sbjct: 58 YVGRAQKKVEPQTEP-KHKFEQMKQDTITRYQGVNLYVKNLDDGIDDEHLRKEFSPFGTI 116
Query: 236 TSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELK 295
TSA VM +G G+SK FGFV F + ++A KAV+ +NG+ + YV AQ K E L
Sbjct: 117 TSAKVMMEG-GRSKGFGFVCFSSPEEATKAVKEMNGRTVATKPLYVALAQLKEESPAHLT 175
Query: 296 GQFEQAM 302
Q+ Q M
Sbjct: 176 SQYMQRM 182
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 88/173 (50%), Gaps = 23/173 (13%)
Query: 43 DSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIR 102
D +L DLF LSV+V D S + S G+ +V++ DA +A+D +N LN K I
Sbjct: 3 DERLKDLFRPA---LSVKVMTDESGK-SKGFRFVSFERHEDAQKAVDEMNGKELNGKQIY 58
Query: 103 IMYSHR-----------------DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNIL 145
+ + + D R G N+++KNLD ID + L FS FG I
Sbjct: 59 VGRAQKKVEPQTEPKHKFEQMKQDTITRYQGV-NLYVKNLDDGIDDEHLRKEFSPFGTIT 117
Query: 146 SCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQE 198
S K+ +G G+SKGFGFV F + E A A+ ++NG + K ++V K+E
Sbjct: 118 SAKVMMEG-GRSKGFGFVCFSSPEEATKAVKEMNGRTVATKPLYVALAQLKEE 169
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 52/83 (62%), Gaps = 3/83 (3%)
Query: 323 IDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPL 382
+DDE+LK+LF S KVM D SG SKG FV+F E+A +A+ EMNGK + K +
Sbjct: 1 MDDERLKDLFR---PALSVKVMTDESGKSKGFRFVSFERHEDAQKAVDEMNGKELNGKQI 57
Query: 383 YVAVAQRKEERRARLQAQFSQMR 405
YV AQ+K E + + +F QM+
Sbjct: 58 YVGRAQKKVEPQTEPKHKFEQMK 80
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
++ +LYV +LD + D L FS G + S +V + RS G+G+V +++P +A
Sbjct: 85 TRYQGVNLYVKNLDDGIDDEHLRKEFSPFGTITSAKVM--MEGGRSKGFGFVCFSSPEEA 142
Query: 85 ARALDVLNFTPLNNKSIRI 103
+A+ +N + K + +
Sbjct: 143 TKAVKEMNGRTVATKPLYV 161
>gi|405963265|gb|EKC28854.1| Polyadenylate-binding protein 1 [Crassostrea gigas]
Length = 172
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 93/159 (58%), Positives = 120/159 (75%), Gaps = 1/159 (0%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
TSLYVGDL +VT+ LY+ FS G VLS+RVCR L TRRSLGY YV++ + DA AL+
Sbjct: 15 TSLYVGDLHPDVTEDMLYEKFSTAGPVLSIRVCRVLFTRRSLGYAYVDFKHLEDAETALN 74
Query: 90 VLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKI 149
+N+ + + IRI + RDPS RKSG GN+FIKNLDKSID+KAL+DTFS+FGNILSCKI
Sbjct: 75 TMNYDTIKGQPIRITWYQRDPSPRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKI 134
Query: 150 ATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQV 188
D G +G+GFV FE +ESA AI+++NG +++ K+V
Sbjct: 135 VCDEHG-FRGYGFVHFEKEESATIAIERVNGTMLHGKKV 172
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 85/154 (55%), Gaps = 6/154 (3%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIA-TDGSGQSKGFGFVQFENKESAQNAIDK 177
++++ +L + L++ FS+ G +LS ++ + +S G+ +V F++ E A+ A++
Sbjct: 16 SLYVGDLHPDVTEDMLYEKFSTAGPVLSIRVCRVLFTRRSLGYAYVDFKHLEDAETALNT 75
Query: 178 LNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITS 237
+N I + + + + +R+ K+ NVF+KNLD+S ++ L F +G I S
Sbjct: 76 MNYDTIKGQPIRITWY----QRDPSPRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 131
Query: 238 AVVMRDGDGKSKCFGFVNFENADDAAKAVEALNG 271
++ D G + +GFV+FE + A A+E +NG
Sbjct: 132 CKIVCDEHG-FRGYGFVHFEKEESATIAIERVNG 164
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 82/173 (47%), Gaps = 18/173 (10%)
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD-GDGKSKCFGFVNFENADDAAKAVE 267
+++V +L T++ L + F G + S V R +S + +V+F++ +DA A+
Sbjct: 15 TSLYVGDLHPDVTEDMLYEKFSTAGPVLSIRVCRVLFTRRSLGYAYVDFKHLEDAETALN 74
Query: 268 ALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEK 327
+N + + Q+ + G N++IKNL SID++
Sbjct: 75 TMNYDTIKGQPIRITWYQRDPSPRKSGVG----------------NVFIKNLDKSIDNKA 118
Query: 328 LKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSK 380
L + FS FG I SCK++ D G +G GFV F E A+ A+ +NG M+ K
Sbjct: 119 LYDTFSAFGNILSCKIVCDEHGF-RGYGFVHFEKEESATIAIERVNGTMLHGK 170
>gi|402697295|gb|AFQ90835.1| polyA-binding protein cytoplasmic 1, partial [Sternotherus minor]
Length = 175
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 97/175 (55%), Positives = 129/175 (73%), Gaps = 3/175 (1%)
Query: 123 KNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGML 182
KNLDKSJD+KAL+D FS+FGNILSCK+ D +G SKG+GFV FE +E+A+ AI+K+NGML
Sbjct: 1 KNLDKSJDNKALYDXFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGML 59
Query: 183 INDKQVFVGHFLRKQERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVV 240
+ND++VFVG F ++ERE A +F NV++KN E DE LK++FG +G S V
Sbjct: 60 LNDRKVFVGRFKSRKEREAXLGARAKEFTNVYIKNFGEDMDDERLKELFGXFGPALSVKV 119
Query: 241 MRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELK 295
M D GKSK FGFV+FE +DA KAV +NGK+ + ++ YV +AQKK ER+ ELK
Sbjct: 120 MTDESGKSKGFGFVSFERHEDAQKAVXEMNGKEXNGKQIYVXRAQKKVERQTELK 174
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 113/185 (61%), Gaps = 11/185 (5%)
Query: 214 KNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKK 273
KNLD+S ++ L F +G I S V+ D +G SK +GFV+FE + A +A+E +NG
Sbjct: 1 KNLDKSJDNKALYDXFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGML 59
Query: 274 FDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFS 333
+DR+ +VG+ + + ERE L + ++ N+YIKN G+ +DDE+LKELF
Sbjct: 60 LNDRKVFVGRFKSRKEREAXLGARAKEFT----------NVYIKNFGEDMDDERLKELFG 109
Query: 334 EFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEER 393
FG S KVM D SG SKG GFV+F E+A +A+ EMNGK K +YV AQ+K ER
Sbjct: 110 XFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVXEMNGKEXNGKQIYVXRAQKKVER 169
Query: 394 RARLQ 398
+ L+
Sbjct: 170 QTELK 174
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 98/172 (56%), Gaps = 8/172 (4%)
Query: 36 DLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTP 95
+LD ++ + LYD FS G +LS +V D + S GYG+V++ A RA++ +N
Sbjct: 2 NLDKSJDNKALYDXFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGML 59
Query: 96 LNNKSIRI----MYSHRDPSI--RKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKI 149
LN++ + + R+ + R N++IKN + +D + L + F FG LS K+
Sbjct: 60 LNDRKVFVGRFKSRKEREAXLGARAKEFTNVYIKNFGEDMDDERLKELFGXFGPALSVKV 119
Query: 150 ATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
TD SG+SKGFGFV FE E AQ A+ ++NG N KQ++V +K ER+T
Sbjct: 120 MTDESGKSKGFGFVSFERHEDAQKAVXEMNGKEXNGKQIYVXRAQKKVERQT 171
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 58/93 (62%), Gaps = 1/93 (1%)
Query: 317 KNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKM 376
KNL SJD++ L + FS FG I SCKV+ D +G SKG GFV F T E A RA+ +MNG +
Sbjct: 1 KNLDKSJDNKALYDXFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGML 59
Query: 377 IVSKPLYVAVAQRKEERRARLQAQFSQMRPVAM 409
+ + ++V + ++ER A L A+ + V +
Sbjct: 60 LNDRKVFVGRFKSRKEREAXLGARAKEFTNVYI 92
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 21 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYAN 80
GA +F T++Y+ + ++ D +L +LF G LSV+V D S +S G+G+V++
Sbjct: 81 GARAKEF--TNVYIKNFGEDMDDERLKELFGXFGPALSVKVMTDESG-KSKGFGFVSFER 137
Query: 81 PADAARALDVLNFTPLNNKSIRIMYSHR 108
DA +A+ +N N K I + + +
Sbjct: 138 HEDAQKAVXEMNGKEXNGKQIYVXRAQK 165
>gi|340546033|gb|AEK51815.1| cytoplasmic poly(A) binding protein 1 [Ichthyophis bannanicus]
Length = 177
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 98/178 (55%), Positives = 130/178 (73%), Gaps = 3/178 (1%)
Query: 123 KNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGML 182
KNLDKSID+KAL+DTFS+FGNILSCK+ D +G SKG+ FV FE +++A AI+K+NGML
Sbjct: 1 KNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGML 59
Query: 183 INDKQVFVGHFLRKQERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVV 240
+ND++VFVG F ++ERE A +F NV++KN + DE LK++F +YG S V
Sbjct: 60 LNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGDDMDDERLKEMFSKYGKTLSVKV 119
Query: 241 MRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQF 298
M D GKSK FGFV+FE +DA KAVE +NGK + + +VG+AQKK ER+ ELK +F
Sbjct: 120 MTDSTGKSKGFGFVSFEKHEDANKAVEEMNGKDVNGKMVFVGRAQKKVERQAELKRKF 177
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/188 (43%), Positives = 120/188 (63%), Gaps = 11/188 (5%)
Query: 214 KNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKK 273
KNLD+S ++ L F +G I S V+ D +G SK + FV+FE D A +A+E +NG
Sbjct: 1 KNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGML 59
Query: 274 FDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFS 333
+DR+ +VG+ + + ERE EL + ++ N+YIKN GD +DDE+LKE+FS
Sbjct: 60 LNDRKVFVGRFKSRKEREAELGARAKEFT----------NVYIKNFGDDMDDERLKEMFS 109
Query: 334 EFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEER 393
++G S KVM D +G SKG GFV+F E+A++A+ EMNGK + K ++V AQ+K ER
Sbjct: 110 KYGKTLSVKVMTDSTGKSKGFGFVSFEKHEDANKAVEEMNGKDVNGKMVFVGRAQKKVER 169
Query: 394 RARLQAQF 401
+A L+ +F
Sbjct: 170 QAELKRKF 177
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 101/179 (56%), Gaps = 9/179 (5%)
Query: 36 DLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTP 95
+LD ++ + LYD FS G +LS +V D + S GY +V++ A RA++ +N
Sbjct: 2 NLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYAFVHFETQDAADRAIEKMNGML 59
Query: 96 LNNKSIRI----MYSHRDPSI--RKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKI 149
LN++ + + R+ + R N++IKN +D + L + FS +G LS K+
Sbjct: 60 LNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGDDMDDERLKEMFSKYGKTLSVKV 119
Query: 150 ATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKF 208
TD +G+SKGFGFV FE E A A++++NG +N K VFVG +K ER+ +K KF
Sbjct: 120 MTDSTGKSKGFGFVSFEKHEDANKAVEEMNGKDVNGKMVFVGRAQKKVERQA-ELKRKF 177
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 317 KNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKM 376
KNL SID++ L + FS FG I SCKV+ D +G SKG FV F T + A RA+ +MNG +
Sbjct: 1 KNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGML 59
Query: 377 IVSKPLYVAVAQRKEERRARLQAQFSQMRPV 407
+ + ++V + ++ER A L A+ + V
Sbjct: 60 LNDRKVFVGRFKSRKEREAELGARAKEFTNV 90
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 52/83 (62%), Gaps = 3/83 (3%)
Query: 21 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYAN 80
GA +F T++Y+ + ++ D +L ++FS+ G+ LSV+V D ST +S G+G+V++
Sbjct: 81 GARAKEF--TNVYIKNFGDDMDDERLKEMFSKYGKTLSVKVMTD-STGKSKGFGFVSFEK 137
Query: 81 PADAARALDVLNFTPLNNKSIRI 103
DA +A++ +N +N K + +
Sbjct: 138 HEDANKAVEEMNGKDVNGKMVFV 160
>gi|300120548|emb|CBK20102.2| unnamed protein product [Blastocystis hominis]
Length = 534
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 154/533 (28%), Positives = 255/533 (47%), Gaps = 20/533 (3%)
Query: 46 LYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMY 105
L + F + G+V + V D +T++S YGYV+++ +A +AL+ NF L K +R+M
Sbjct: 5 LEEEFKKYGKVRATHVVLDKNTKQSRCYGYVDFSTAEEAEKALEGANFNILKGKEMRVMR 64
Query: 106 SHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQ 164
+ GN+F+KNL + +K L D FS++GNILSCK+A D +G+S +G+V
Sbjct: 65 QQLRFKQTCNPKGNLFVKNLPDLMTNKELLDKFSAYGNILSCKVAFDKETGKSLHYGYVH 124
Query: 165 FENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDED 224
F + Q + +N ++ + ++V + E+ + + +V N + T++
Sbjct: 125 FSDPNVTQKVLADMNKDVVEEGAMYVMEY----EKRMKDTSSDWVTCYVANFPTTLTEDG 180
Query: 225 LKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKF-----DDREW 279
L+ +FG+YGTI S + K GFV F N D A KAVE L + +
Sbjct: 181 LRDLFGKYGTINSVYIGYKRYNPQKIQGFVTFANHDSAVKAVEGLKDQVITVEGAEPMVL 240
Query: 280 YVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTIT 339
YV + Q + ER + E+ KE V++ +G LY+ +I E+L+E+F +G I
Sbjct: 241 YVNRLQSREERASINQKILEEKKKEEVERTKGRFLYVGFGDQTITLERLREIFQAYGNIE 300
Query: 340 SCKVMRDPSGIS-KGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQ 398
SC + RD + K GFV T E A A+ + L V +AQ +EER L+
Sbjct: 301 SCSIARDKNTKELKPFGFVCMDTTENAQNAIRAFRESHDLK--LKVELAQTREERAKMLK 358
Query: 399 AQFSQMRPVAMG-PSVPPRMPM-YPPGPSGLGQQFLYGQAPPAIIPPQMPPRGHAYRYPL 456
+ Q + V M P V MP+ G + Q ++P G+ +P
Sbjct: 359 ERRKQTQGVVMQYPVVQYTMPIGMNMGNRMPSNKQQQQQQQIPMMPMMYQTMGNMMSFPR 418
Query: 457 GRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPM-PIT-ALSTALANASPEQQRTL 514
M P M + + + AS+ Q M PI + A+ N E++R
Sbjct: 419 NTQMPGMPVQMMNQGYMSMANTQFNEKYNKLASLMQSMDPIKREMIDAMTN---EERRNT 475
Query: 515 LGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVL 567
GE ++ L++ + +K+TGM+LE+ +++ ++ P L K+ EA +VL
Sbjct: 476 FGERIFYLIKTIGDPRCSKITGMMLELPVDDLMKIISDPGELLKKIDEANDVL 528
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 136/291 (46%), Gaps = 24/291 (8%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
+L+V +L +T+ +L D FS G +LS +V D T +SL YGYV++++P + L
Sbjct: 78 NLFVKNLPDLMTNKELLDKFSAYGNILSCKVAFDKETGKSLHYGYVHFSDPNVTQKVLAD 137
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+N + ++ +M + S ++ N ++ L D F +G I S I
Sbjct: 138 MNKDVVEEGAMYVMEYEKRMKDTSSDWVTCYVANFPTTLTEDGLRDLFGKYGTINSVYIG 197
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDK-----QVFVGHFLRKQERETV--- 202
K GFV F N +SA A++ L +I + ++V ++ER ++
Sbjct: 198 YKRYNPQKIQGFVTFANHDSAVKAVEGLKDQVITVEGAEPMVLYVNRLQSREERASINQK 257
Query: 203 -----------AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKS-KC 250
K +F ++V D++ T E L++IF YG I S + RD + K K
Sbjct: 258 ILEEKKKEEVERTKGRF--LYVGFGDQTITLERLREIFQAYGNIESCSIARDKNTKELKP 315
Query: 251 FGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQA 301
FGFV + ++A A+ A ++ D + V AQ + ER + LK + +Q
Sbjct: 316 FGFVCMDTTENAQNAIRAF--RESHDLKLKVELAQTREERAKMLKERRKQT 364
>gi|297830144|ref|XP_002882954.1| hypothetical protein ARALYDRAFT_897861 [Arabidopsis lyrata subsp.
lyrata]
gi|297328794|gb|EFH59213.1| hypothetical protein ARALYDRAFT_897861 [Arabidopsis lyrata subsp.
lyrata]
Length = 406
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 108/270 (40%), Positives = 160/270 (59%), Gaps = 12/270 (4%)
Query: 173 NAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEY 232
+A L+G +++ K++FV F+ K ER ++ +F NV+V+NL E+ T++ L ++F +Y
Sbjct: 30 SARSALHGSMVDGKKLFVAKFINKDERAAMSWNQEFTNVYVENLIENVTEDILHRLFSQY 89
Query: 233 GTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQ 292
G ++S VVMRDG G+S+ GFVNF + ++A KAVE L G++ + +VGKA +K ER +
Sbjct: 90 GIVSSVVVMRDGMGRSRGLGFVNFCHLENAKKAVEFLCGRQLGSKTLFVGKALRKDERME 149
Query: 293 ELKGQFEQAMKETVDK--FQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGI 350
LK F ++ K N+Y+KNL +S++D +L+E+F +G I S KVMR +G
Sbjct: 150 MLKQHFRD---NSIAKPNMGWSNMYVKNLSESMNDTRLREIFGRYGQIVSAKVMRHENGR 206
Query: 351 SKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFS-QMRPVAM 409
SKG GFV FS EE+ +A +N + KPL V V +RKE+ RL F Q R
Sbjct: 207 SKGFGFVCFSNREESKQAKRYLN---VDGKPLVVRVTERKEDTLKRLHQYFHGQPRHYTQ 263
Query: 410 GPSVP-PRMPM--YPPGPSGLGQQFLYGQA 436
P VP P P+ Y P G Q F G +
Sbjct: 264 APLVPSPTQPVLSYVPSSYGYLQPFHVGTS 293
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 98/164 (59%), Gaps = 13/164 (7%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKL 178
N++++NL +++ LH FS +G + S + DG G+S+G GFV F + E+A+ A++ L
Sbjct: 67 NVYVENLIENVTEDILHRLFSQYGIVSSVVVMRDGMGRSRGLGFVNFCHLENAKKAVEFL 126
Query: 179 NGMLINDKQVFVGHFLRKQERETVAIKTKF------------NNVFVKNLDESTTDEDLK 226
G + K +FVG LRK ER + +K F +N++VKNL ES D L+
Sbjct: 127 CGRQLGSKTLFVGKALRKDERMEM-LKQHFRDNSIAKPNMGWSNMYVKNLSESMNDTRLR 185
Query: 227 KIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALN 270
+IFG YG I SA VMR +G+SK FGFV F N +++ +A LN
Sbjct: 186 EIFGRYGQIVSAKVMRHENGRSKGFGFVCFSNREESKQAKRYLN 229
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 98/175 (56%), Gaps = 17/175 (9%)
Query: 20 AGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYA 79
A S NQ T ++YV +L NVT+ L+ LFSQ G V SV V RD RS G G+VN+
Sbjct: 57 AAMSWNQEFT-NVYVENLIENVTEDILHRLFSQYGIVSSVVVMRD-GMGRSRGLGFVNFC 114
Query: 80 NPADAARALDVLNFTPLNNKSI------------RIMYSH-RDPSIRKS--GTGNIFIKN 124
+ +A +A++ L L +K++ ++ H RD SI K G N+++KN
Sbjct: 115 HLENAKKAVEFLCGRQLGSKTLFVGKALRKDERMEMLKQHFRDNSIAKPNMGWSNMYVKN 174
Query: 125 LDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLN 179
L +S++ L + F +G I+S K+ +G+SKGFGFV F N+E ++ A LN
Sbjct: 175 LSESMNDTRLREIFGRYGQIVSAKVMRHENGRSKGFGFVCFSNREESKQAKRYLN 229
>gi|296235783|ref|XP_002763047.1| PREDICTED: uncharacterized protein LOC100399785, partial
[Callithrix jacchus]
Length = 445
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 88/147 (59%), Positives = 109/147 (74%), Gaps = 2/147 (1%)
Query: 21 GASGN-QFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYA 79
G GN F SLYVGDL VT++ LY+ FS G +LS+R+CRD TRRSLGY YVNY
Sbjct: 300 GCEGNPDFPMASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQ 359
Query: 80 NPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFS 139
P DA RAL+ LNF + + +RIM+S RDPS+RKSG GN+FIKNL K+ID+KAL++ FS
Sbjct: 360 QPVDAKRALETLNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFS 419
Query: 140 SFGNILSCKIATDGSGQSKGFGFVQFE 166
+FGNILSCK+A D G KG+GFV F+
Sbjct: 420 AFGNILSCKVACDEKG-PKGYGFVHFQ 445
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 72/151 (47%), Gaps = 18/151 (11%)
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENADDAAKAVEA 268
+++V +L T+ L + F G I S + RD +S + +VN++ DA +A+E
Sbjct: 311 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALET 370
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
LN R + +Q+ + G N++IKNLG +ID++ L
Sbjct: 371 LNFDVIKGRPVRIMWSQRDPSLRKSGVG----------------NVFIKNLGKTIDNKAL 414
Query: 329 KELFSEFGTITSCKVMRDPSGISKGSGFVAF 359
+FS FG I SCKV D G KG GFV F
Sbjct: 415 YNIFSAFGNILSCKVACDEKG-PKGYGFVHF 444
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 74/140 (52%), Gaps = 6/140 (4%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDK 177
++++ +L + L++ FS G ILS +I D + +S G+ +V ++ A+ A++
Sbjct: 311 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALET 370
Query: 178 LNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITS 237
LN +I + V + +R+ K+ NVF+KNL ++ ++ L IF +G I S
Sbjct: 371 LNFDVIKGRPVRI----MWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILS 426
Query: 238 AVVMRDGDGKSKCFGFVNFE 257
V D G K +GFV+F+
Sbjct: 427 CKVACDEKGP-KGYGFVHFQ 445
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 309 FQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP-SGISKGSGFVAFSTPEEASR 367
F +LY+ +L + + L E FS G I S ++ RD + S G +V + P +A R
Sbjct: 307 FPMASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKR 366
Query: 368 ALAEMNGKMIVSKPLYVAVAQRKEERR 394
AL +N +I +P+ + +QR R
Sbjct: 367 ALETLNFDVIKGRPVRIMWSQRDPSLR 393
>gi|289740845|gb|ADD19170.1| polyadenylate-binding protein [Glossina morsitans morsitans]
Length = 321
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 88/188 (46%), Positives = 138/188 (73%), Gaps = 1/188 (0%)
Query: 117 TGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAID 176
+G I+IKNL++SID+KA++DTFS+FGNIL+C +A D G S+G+GFVQF+++E+A+ AI+
Sbjct: 127 SGKIYIKNLERSIDNKAVYDTFSAFGNILNCNVAKDEHGNSRGYGFVQFDSEEAARAAIE 186
Query: 177 KLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTIT 236
K+NG+L N ++V V ++ +++RE T+F N++VKN +E +++++K++F YG IT
Sbjct: 187 KVNGILCNSQKVHVVKYIPRRDREQEKA-TQFRNLYVKNFNEDFSEQNMKEMFEPYGRIT 245
Query: 237 SAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKG 296
S +M D +G+SK FGFV FEN A AV ALNGK+ D+ YV +A K ER+QE+
Sbjct: 246 SHKIMTDEEGRSKRFGFVAFENPQSALAAVIALNGKQLGDKYLYVARALSKIERQQEINR 305
Query: 297 QFEQAMKE 304
+ E+ ++
Sbjct: 306 KLEERKRQ 313
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 106/195 (54%), Gaps = 13/195 (6%)
Query: 211 VFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALN 270
+++KNL+ S ++ + F +G I + V +D G S+ +GFV F++ + A A+E +N
Sbjct: 130 IYIKNLERSIDNKAVYDTFSAFGNILNCNVAKDEHGNSRGYGFVQFDSEEAARAAIEKVN 189
Query: 271 GKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKE 330
G + ++ +V K + +REQE QF NLY+KN + ++ +KE
Sbjct: 190 GILCNSQKVHVVKYIPRRDREQEKATQFR-------------NLYVKNFNEDFSEQNMKE 236
Query: 331 LFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRK 390
+F +G ITS K+M D G SK GFVAF P+ A A+ +NGK + K LYVA A K
Sbjct: 237 MFEPYGRITSHKIMTDEEGRSKRFGFVAFENPQSALAAVIALNGKQLGDKYLYVARALSK 296
Query: 391 EERRARLQAQFSQMR 405
ER+ + + + +
Sbjct: 297 IERQQEINRKLEERK 311
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 96/172 (55%), Gaps = 4/172 (2%)
Query: 32 LYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVL 91
+Y+ +L+ ++ + +YD FS G +L+ V +D S GYG+V + + A A++ +
Sbjct: 130 IYIKNLERSIDNKAVYDTFSAFGNILNCNVAKD-EHGNSRGYGFVQFDSEEAARAAIEKV 188
Query: 92 NFTPLNNKSIRIM-YSHRDPSIRKSGTG--NIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
N N++ + ++ Y R ++ T N+++KN ++ + + + F +G I S K
Sbjct: 189 NGILCNSQKVHVVKYIPRRDREQEKATQFRNLYVKNFNEDFSEQNMKEMFEPYGRITSHK 248
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERE 200
I TD G+SK FGFV FEN +SA A+ LNG + DK ++V L K ER+
Sbjct: 249 IMTDEEGRSKRFGFVAFENPQSALAAVIALNGKQLGDKYLYVARALSKIERQ 300
>gi|13365525|dbj|BAB39136.1| poly(A)-binding protein [Carassius auratus]
Length = 154
Score = 185 bits (470), Expect = 6e-44, Method: Composition-based stats.
Identities = 91/153 (59%), Positives = 116/153 (75%), Gaps = 3/153 (1%)
Query: 104 MYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFV 163
M+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FGNILSCK+ D +G SKG+GFV
Sbjct: 1 MWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFV 59
Query: 164 QFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTKFNNVFVKNLDESTT 221
FE E+A+ AI+K+NGML+ND++VFVG F ++ERE A +F NV++KN E
Sbjct: 60 HFETHEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAEMGARAKEFTNVYIKNFGEDME 119
Query: 222 DEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFV 254
DE L++IF ++G S VM D GKS+ FGFV
Sbjct: 120 DEKLREIFSKFGPALSIRVMTDDGGKSRSFGFV 152
Score = 114 bits (284), Expect = 2e-22, Method: Composition-based stats.
Identities = 61/160 (38%), Positives = 97/160 (60%), Gaps = 11/160 (6%)
Query: 198 ERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFE 257
+R+ K+ N+F+KNLD+S ++ L F +G I S V+ D +G SK +GFV+FE
Sbjct: 4 QRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFE 62
Query: 258 NADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIK 317
+ A +A+E +NG +DR+ +VG+ + + ERE E+ + ++ N+YIK
Sbjct: 63 THEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAEMGARAKEFT----------NVYIK 112
Query: 318 NLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFV 357
N G+ ++DEKL+E+FS+FG S +VM D G S+ GFV
Sbjct: 113 NFGEDMEDEKLREIFSKFGPALSIRVMTDDGGKSRSFGFV 152
Score = 78.2 bits (191), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/95 (43%), Positives = 61/95 (64%), Gaps = 1/95 (1%)
Query: 313 NLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEM 372
N++IKNL SID++ L + FS FG I SCKV+ D +G SKG GFV F T E A RA+ +M
Sbjct: 16 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETHEAAERAIEKM 74
Query: 373 NGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPV 407
NG ++ + ++V + ++ER A + A+ + V
Sbjct: 75 NGMLLNDRKVFVGRFKSRKEREAEMGARAKEFTNV 109
Score = 77.0 bits (188), Expect = 3e-11, Method: Composition-based stats.
Identities = 44/139 (31%), Positives = 77/139 (55%), Gaps = 8/139 (5%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ +LD ++ + LYD FS G +LS +V D S GYG+V++ A RA++
Sbjct: 16 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD--ENGSKGYGFVHFETHEAAERAIEK 73
Query: 91 LNFTPLNNKSIRI----MYSHRDPSI--RKSGTGNIFIKNLDKSIDHKALHDTFSSFGNI 144
+N LN++ + + R+ + R N++IKN + ++ + L + FS FG
Sbjct: 74 MNGMLLNDRKVFVGRFKSRKEREAEMGARAKEFTNVYIKNFGEDMEDEKLREIFSKFGPA 133
Query: 145 LSCKIATDGSGQSKGFGFV 163
LS ++ TD G+S+ FGFV
Sbjct: 134 LSIRVMTDDGGKSRSFGFV 152
>gi|301606181|ref|XP_002932728.1| PREDICTED: polyadenylate-binding protein 1-B-like [Xenopus
(Silurana) tropicalis]
Length = 447
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 138/409 (33%), Positives = 205/409 (50%), Gaps = 64/409 (15%)
Query: 205 KTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAK 264
KTK ++VKN + ++D FG+ G T ++ + G+ FG + F DA +
Sbjct: 40 KTKTCPIYVKNFVKEIDEDDF---FGKCGASTK--IINNDCGQQTEFGLLPFNKQKDAIR 94
Query: 265 AVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSID 324
AV+ + G + Y+ +A+ K +R+ E + E K ++ +NLY+KNL ID
Sbjct: 95 AVDKMKG-----MDIYLAQAKIKEKRQTEFSKKPEPLHK---PRYNSVNLYVKNLSYEID 146
Query: 325 DEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYV 384
D +LK+ F+ FGTITS KVMR+ G SKG GFV FSTP EA +AL+EMNGK++ SKPLYV
Sbjct: 147 DYRLKKEFAPFGTITSAKVMRE-GGRSKGFGFVCFSTPAEARKALSEMNGKILASKPLYV 205
Query: 385 AVAQRKEERRARLQAQFSQMRPVAMGPS--VPP------RMPMYP--------------- 421
A AQRK+ER+ L Q++Q A P+ V P R M P
Sbjct: 206 AWAQRKQERQVSLAQQYTQRMEKAWIPNTKVNPNQALLSRCSMAPIPAVQNHSEDSLCRI 265
Query: 422 PGPSGLGQQFLY----GQAPPAIIPPQMPPRGH----AYRYPLGRNMQDFPFDMG----- 468
P + +Q Y G AP + Q PR H +Y L G
Sbjct: 266 PKQTAQFKQRCYRNAQGTAPHSF---QYMPRAHPQISTRKYKLIPTKTAVNLVRGIMSAT 322
Query: 469 ---------AGSMLPVPVDMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESL 519
+ L A + V P+T + L +ASP +Q+ +LG L
Sbjct: 323 SRNKYAAGDCNTELHSEKQTQAAMQHPAICVQGQEPLTI--SLLVSASPHEQKQMLGVRL 380
Query: 520 YPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLR 568
+PLV+ +++ A K+TG+LLE D +E++++LESPE L+ +A+ +L+
Sbjct: 381 FPLVQIIDKKLAEKITGILLEFDTSEIIYMLESPELLRTMANKAVTLLQ 429
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 109/207 (52%), Gaps = 20/207 (9%)
Query: 107 HRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFE 166
H + + K+ T I++KN K ID D F G S KI + GQ FG + F
Sbjct: 33 HVNDTESKTKTCPIYVKNFVKEIDED---DFFGKCG--ASTKIINNDCGQQTEFGLLPFN 87
Query: 167 NKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKT-------KFN--NVFVKNLD 217
++ A A+DK+ GM +++ K++R+T K ++N N++VKNL
Sbjct: 88 KQKDAIRAVDKMKGM-----DIYLAQAKIKEKRQTEFSKKPEPLHKPRYNSVNLYVKNLS 142
Query: 218 ESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDR 277
D LKK F +GTITSA VMR+G G+SK FGFV F +A KA+ +NGK +
Sbjct: 143 YEIDDYRLKKEFAPFGTITSAKVMREG-GRSKGFGFVCFSTPAEARKALSEMNGKILASK 201
Query: 278 EWYVGKAQKKSEREQELKGQFEQAMKE 304
YV AQ+K ER+ L Q+ Q M++
Sbjct: 202 PLYVAWAQRKQERQVSLAQQYTQRMEK 228
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 70/136 (51%), Gaps = 9/136 (6%)
Query: 73 YGYVNYANPADAARALDVLNFTPLNNKSIRIM------YSHRDPSIRKS--GTGNIFIKN 124
+G + + DA RA+D + + +I +S + + K + N+++KN
Sbjct: 81 FGLLPFNKQKDAIRAVDKMKGMDIYLAQAKIKEKRQTEFSKKPEPLHKPRYNSVNLYVKN 140
Query: 125 LDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLIN 184
L ID L F+ FG I S K+ +G G+SKGFGFV F A+ A+ ++NG ++
Sbjct: 141 LSYEIDDYRLKKEFAPFGTITSAKVMREG-GRSKGFGFVCFSTPAEARKALSEMNGKILA 199
Query: 185 DKQVFVGHFLRKQERE 200
K ++V RKQER+
Sbjct: 200 SKPLYVAWAQRKQERQ 215
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Query: 26 QFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAA 85
++ + +LYV +L + + D +L F+ G + S +V R+ RS G+G+V ++ PA+A
Sbjct: 130 RYNSVNLYVKNLSYEIDDYRLKKEFAPFGTITSAKVMREGG--RSKGFGFVCFSTPAEAR 187
Query: 86 RALDVLNFTPLNNKSIRIMYSHR 108
+AL +N L +K + + ++ R
Sbjct: 188 KALSEMNGKILASKPLYVAWAQR 210
>gi|162605986|ref|XP_001713508.1| polyadenylate-binding protein [Guillardia theta]
gi|13794428|gb|AAK39803.1|AF165818_11 polyadenylate-binding protein [Guillardia theta]
Length = 389
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 103/261 (39%), Positives = 158/261 (60%), Gaps = 4/261 (1%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
LYVGDL+ ++ D L +F + ++ +R+C+D+ + SLGY YV + + + A +AL+
Sbjct: 5 CLYVGDLNVSLKDIDLERIFRKDYEISGLRICKDIFSGNSLGYSYVYFNSYSSAKKALND 64
Query: 91 LNF---TPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSC 147
+NF T L IRIM+ + + SIRKSG GN+FIKNL + K LH FS +G ILS
Sbjct: 65 MNFYSDTELFKTPIRIMWKNNNNSIRKSGYGNLFIKNLPYNFSPKDLHSLFSEYGEILSS 124
Query: 148 KIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK 207
KI D G S G+GFV ++ + A +AI+ LNG LI++K + V HFL K +RE ++
Sbjct: 125 KIKYDNEGSSLGYGFVHYKEMKDAISAINNLNGKLISNKMITVKHFLNKSQRERISSCDL 184
Query: 208 FNNVFVKNL-DESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
F N++VKNL + +++ + +FG +G ITS + + K F ++NFEN +DA +A+
Sbjct: 185 FTNIYVKNLPVDKLSEKVIFNLFGVFGKITSIFIPLWYNSIPKGFAYINFENHEDAEEAI 244
Query: 267 EALNGKKFDDREWYVGKAQKK 287
+N +K + V KA K
Sbjct: 245 ITMNNRKIAGKSLIVCKAINK 265
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 122/240 (50%), Gaps = 18/240 (7%)
Query: 154 SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVG--HFLRKQERETVAIKTKFNNV 211
SG S G+ +V F + SA+ A++ +N +D ++F + K ++ K+ + N+
Sbjct: 41 SGNSLGYSYVYFNSYSSAKKALNDMN--FYSDTELFKTPIRIMWKNNNNSIR-KSGYGNL 97
Query: 212 FVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNG 271
F+KNL + + +DL +F EYG I S+ + D +G S +GFV+++ DA A+ LNG
Sbjct: 98 FIKNLPYNFSPKDLHSLFSEYGEILSSKIKYDNEGSSLGYGFVHYKEMKDAISAINNLNG 157
Query: 272 KKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL-GDSIDDEKLKE 330
K ++ V KS+RE+ + D F N+Y+KNL D + ++ +
Sbjct: 158 KLISNKMITVKHFLNKSQRERI----------SSCDLFT--NIYVKNLPVDKLSEKVIFN 205
Query: 331 LFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRK 390
LF FG ITS + + I KG ++ F E+A A+ MN + I K L V A K
Sbjct: 206 LFGVFGKITSIFIPLWYNSIPKGFAYINFENHEDAEEAIITMNNRKIAGKSLIVCKAINK 265
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 98/183 (53%), Gaps = 8/183 (4%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
+L++ +L +N + L+ LFS+ G++LS ++ D + SLGYG+V+Y DA A++
Sbjct: 96 NLFIKNLPYNFSPKDLHSLFSEYGEILSSKIKYD-NEGSSLGYGFVHYKEMKDAISAINN 154
Query: 91 LNFTPLNNKSIRIMY----SHRDPSIRKSGTGNIFIKNL--DKSIDHKALHDTFSSFGNI 144
LN ++NK I + + S R+ NI++KNL DK + K + + F FG I
Sbjct: 155 LNGKLISNKMITVKHFLNKSQRERISSCDLFTNIYVKNLPVDK-LSEKVIFNLFGVFGKI 213
Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAI 204
S I + KGF ++ FEN E A+ AI +N I K + V + K + +T+
Sbjct: 214 TSIFIPLWYNSIPKGFAYINFENHEDAEEAIITMNNRKIAGKSLIVCKAINKIKIDTINK 273
Query: 205 KTK 207
K++
Sbjct: 274 KSR 276
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 111/247 (44%), Gaps = 26/247 (10%)
Query: 211 VFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD-GDGKSKCFGFVNFENADDAAKAVEAL 269
++V +L+ S D DL++IF + I+ + +D G S + +V F + A KA+ +
Sbjct: 6 LYVGDLNVSLKDIDLERIFRKDYEISGLRICKDIFSGNSLGYSYVYFNSYSSAKKALNDM 65
Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLK 329
N + D E + K+ K ++ K NL+IKNL + + L
Sbjct: 66 NF--YSDTELF------KTPIRIMWKNN-----NNSIRKSGYGNLFIKNLPYNFSPKDLH 112
Query: 330 ELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQR 389
LFSE+G I S K+ D G S G GFV + ++A A+ +NGK+I +K + V
Sbjct: 113 SLFSEYGEILSSKIKYDNEGSSLGYGFVHYKEMKDAISAINNLNGKLISNKMITVKHFLN 172
Query: 390 KEERRARLQAQFSQMRPVAMGPSVPPR-MPMYPPGPSGLGQQF-LYGQAPPAIIPPQMP- 446
K +R ++ + ++ + +P+ + F ++G+ IP
Sbjct: 173 KSQRE--------RISSCDLFTNIYVKNLPVDKLSEKVIFNLFGVFGKITSIFIPLWYNS 224
Query: 447 -PRGHAY 452
P+G AY
Sbjct: 225 IPKGFAY 231
>gi|429963232|gb|ELA42776.1| hypothetical protein VICG_00091 [Vittaforma corneae ATCC 50505]
Length = 528
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 117/344 (34%), Positives = 190/344 (55%), Gaps = 29/344 (8%)
Query: 72 GYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGT-----GNIFIKNLD 126
Y +V + + DA R ++ N+T L+++ + +M I SG N+F+KN+
Sbjct: 92 SYAFVTFLSIEDAKRIVEKYNYTTLHDREMTLM-------ILTSGNVFPENANLFVKNIP 144
Query: 127 KSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDK 186
K K L++ F FG+I SCK++ D +G+S+G+GFVQ+E ESA AI L K
Sbjct: 145 KEYTTKKLYEIFKDFGSIASCKVSVDSNGESRGYGFVQYETVESADKAIADLRDEKFEGK 204
Query: 187 QVFVGHF---LRKQER-ETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMR 242
+ + F LR Q+ ++ + + F NVFVKN S T+ LK I +YG I S +
Sbjct: 205 TLSISRFDRSLRDQKHSDSSSSTSSFTNVFVKNFPSSLTEAKLKDILEKYGPICSIYLPL 264
Query: 243 DGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDRE-----------WYVGKAQKKSERE 291
+ + F VNFE A+DAAKAVE L+ K E +Y+ KA+++ ERE
Sbjct: 265 NEKSEPVGFACVNFEKAEDAAKAVENLHNKHIFSLEECQDSSVATCPFYIQKAERRKERE 324
Query: 292 QELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGIS 351
+ ++ Q E + ++ NLYI ++ ++ ++++++LFS+FGTI S K+ + S +
Sbjct: 325 ETIRKQLEALSLKGIN--SKNNLYIAHIPETFSEDEIRDLFSKFGTIVSIKLQKTSSENN 382
Query: 352 KGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRA 395
K G++ F TPEEA+ A M+G ++ + L ++ + K ERRA
Sbjct: 383 KQFGYICFKTPEEAAAAFEAMDGTLLDNSKLRISFYKAKNERRA 426
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 126/263 (47%), Gaps = 37/263 (14%)
Query: 159 GFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFN------NVF 212
+ FV F + E A+ ++K N ++D+++ T+ I T N N+F
Sbjct: 92 SYAFVTFLSIEDAKRIVEKYNYTTLHDREM------------TLMILTSGNVFPENANLF 139
Query: 213 VKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGK 272
VKN+ + T + L +IF ++G+I S V D +G+S+ +GFV +E + A KA+ L +
Sbjct: 140 VKNIPKEYTTKKLYEIFKDFGSIASCKVSVDSNGESRGYGFVQYETVESADKAIADLRDE 199
Query: 273 KFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELF 332
KF+ GK S ++ L+ Q + F N+++KN S+ + KLK++
Sbjct: 200 KFE------GKTLSISRFDRSLRDQKHSDSSSSTSSFT--NVFVKNFPSSLTEAKLKDIL 251
Query: 333 SEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS-----------KP 381
++G I S + + G V F E+A++A+ ++ K I S P
Sbjct: 252 EKYGPICSIYLPLNEKSEPVGFACVNFEKAEDAAKAVENLHNKHIFSLEECQDSSVATCP 311
Query: 382 LYVAVAQRKEERRARLQAQFSQM 404
Y+ A+R++ER ++ Q +
Sbjct: 312 FYIQKAERRKEREETIRKQLEAL 334
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 141/305 (46%), Gaps = 37/305 (12%)
Query: 22 ASGNQF-LTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYAN 80
SGN F +L+V ++ T +LY++F G + S +V D S S GYG+V Y
Sbjct: 127 TSGNVFPENANLFVKNIPKEYTTKKLYEIFKDFGSIASCKVSVD-SNGESRGYGFVQYET 185
Query: 81 PADAARALDVLNFTPLNNKSIRIMYSHRDPSIR----------KSGTGNIFIKNLDKSID 130
A +A+ L K++ I S D S+R S N+F+KN S+
Sbjct: 186 VESADKAIADLRDEKFEGKTLSI--SRFDRSLRDQKHSDSSSSTSSFTNVFVKNFPSSLT 243
Query: 131 HKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLI------N 184
L D +G I S + + + GF V FE E A A++ L+ I
Sbjct: 244 EAKLKDILEKYGPICSIYLPLNEKSEPVGFACVNFEKAEDAAKAVENLHNKHIFSLEECQ 303
Query: 185 DKQVFVGHFL------RKQERETV----------AIKTKFNNVFVKNLDESTTDEDLKKI 228
D V F RK+ ET+ I +K NN+++ ++ E+ ++++++ +
Sbjct: 304 DSSVATCPFYIQKAERRKEREETIRKQLEALSLKGINSK-NNLYIAHIPETFSEDEIRDL 362
Query: 229 FGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKS 288
F ++GTI S + + +K FG++ F+ ++AA A EA++G D+ + + + K+
Sbjct: 363 FSKFGTIVSIKLQKTSSENNKQFGYICFKTPEEAAAAFEAMDGTLLDNSKLRISFYKAKN 422
Query: 289 EREQE 293
ER E
Sbjct: 423 ERRAE 427
>gi|378756066|gb|EHY66091.1| hypothetical protein NERG_00787 [Nematocida sp. 1 ERTm2]
Length = 513
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 118/372 (31%), Positives = 208/372 (55%), Gaps = 15/372 (4%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCR-DLSTRRSLGYGYVNYANPADAARALD 89
S+YVGD+ + T+S L+ +FS+VGQ+ +V + R +LS + Y YV + + A A++
Sbjct: 20 SIYVGDIPTSTTESDLFQIFSKVGQIYTVIIPRKELSIVKDKCYAYVTFFDEASVPTAIE 79
Query: 90 VLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKI 149
NF LN IR+M ++ S+ + GNI IKNL K D++ L+DTF FG I+SCK+
Sbjct: 80 TFNFYELNGSQIRVMPLDKE-SVVNNREGNIVIKNLPKETDNQTLYDTFIIFGPIVSCKV 138
Query: 150 ATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFL--RKQERETVAIKTK 207
+ + G G++Q+++ + A+ AI +N +++N K++ + K+E++ ++
Sbjct: 139 VKNSLSECSGIGYIQYKDPKIAEVAIQMINKIMLNGKKLCAVQCVPNDKREKKRENVEKI 198
Query: 208 FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVE 267
F N+++KN + +E++KK EYG +TS V R G+ + F F N++ + A A+
Sbjct: 199 FTNIYMKNFPKGVEEEEIKKKLEEYGELTSFFVPRAETGEMRGFAFANYKTHEMAEAAIL 258
Query: 268 ALNGKKF------DDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGD 321
L+ K F + YV +A+ KSER +E G F ++ V + N+YI NL
Sbjct: 259 GLHDKPFFGGNSGEGENLYVQRAKLKSERVEETAGYFANPPEQEVRR----NIYITNLPG 314
Query: 322 SIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKP 381
+++E + + FS++G I + K+ D ++ G+V + E+A++A+ N +P
Sbjct: 315 DLNEEDVVKYFSKYGPINTYKLGTDTKN-NRSYGYVFYQKAEDAAKAVELANKSEYCGQP 373
Query: 382 LYVAVAQRKEER 393
L VA + K+ R
Sbjct: 374 LGVAFFKCKKLR 385
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 28/204 (13%)
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDG--KSKCFGFVNFENADDAAKAV 266
N+++V ++ STT+ DL +IF + G I + ++ R K KC+ +V F + A+
Sbjct: 19 NSIYVGDIPTSTTESDLFQIFSKVGQIYTVIIPRKELSIVKDKCYAYVTFFDEASVPTAI 78
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAM---KETVDKFQGLNLYIKNLGDSI 323
E N +Y EL G + M KE+V + N+ IKNL
Sbjct: 79 ETFN--------FY------------ELNGSQIRVMPLDKESVVNNREGNIVIKNLPKET 118
Query: 324 DDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLY 383
D++ L + F FG I SCKV+++ G G++ + P+ A A+ +N M+ K L
Sbjct: 119 DNQTLYDTFIIFGPIVSCKVVKNSLSECSGIGYIQYKDPKIAEVAIQMINKIMLNGKKLC 178
Query: 384 VAVA---QRKEERRARLQAQFSQM 404
++E++R ++ F+ +
Sbjct: 179 AVQCVPNDKREKKRENVEKIFTNI 202
>gi|167534320|ref|XP_001748838.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772800|gb|EDQ86448.1| predicted protein [Monosiga brevicollis MX1]
Length = 514
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 118/402 (29%), Positives = 202/402 (50%), Gaps = 17/402 (4%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SL + L T+SQL +LF +G S+ + RD + + LG+GYVN+ + A A+
Sbjct: 10 SASLRIDHLPETATESQLAELFGAIGDFKSIHIIRDSISNKPLGHGYVNFEDVDSAIEAI 69
Query: 89 DVLNFTPL----NNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNI 144
VL+ L ++K I + ++ P+ + +G +F+KNL + +D+K + DTF+S G
Sbjct: 70 KVLDGMDLTGGNDDKGISLSFTPSQPASSAASSGTLFVKNLAEDVDNKTIFDTFASIGAP 129
Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAI 204
S K+ T G+S+GF V +++ + AQ A+D+L G+++N K + R Q +
Sbjct: 130 SSAKVMTTAEGKSRGFAIVHYDDPQLAQRALDELEGVVVNGKNI---RLERYQTGAQLKE 186
Query: 205 KTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAK 264
+++ V++ L TD+ L + +G++ S V + D FV E+ +
Sbjct: 187 ESRKRTVYLAGLPHEVTDKQLIDLLSPFGSVIS-VKLYPKDKDRNPVAFVTMEDEQAVLR 245
Query: 265 AVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSID 324
AVE LNG F+ + V + Q ++ Q + ++ET D LY++N+ + +
Sbjct: 246 AVEKLNGGSFERQRITVAQLQARNPATQSSGPTSARQVEETKDA----TLYVRNIYEDVQ 301
Query: 325 DEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYV 384
D L E F FG ++ + R +G ++G FV F PE+ + ALA N + +
Sbjct: 302 DSDLSEAFGVFGPVSRVTIPRSANGDTRGFAFVVFENPEDRAHALAAGNMLEVGGGKVQY 361
Query: 385 AVAQRKEERRARLQAQFS-QMRPVAMGPSVPPRMPMYPPGPS 425
+ + KEE LQ S MRP A P+ P+ P GP+
Sbjct: 362 SAYRTKEE----LQNMSSFGMRPNAGAPAANPQCPPRQVGPT 399
>gi|432114066|gb|ELK36113.1| Polyadenylate-binding protein 1 [Myotis davidii]
Length = 230
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 94/204 (46%), Positives = 138/204 (67%), Gaps = 5/204 (2%)
Query: 222 DEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYV 281
DE LK +FG++G S VM D G SK FGFV+F+ +D KAV+ +NGK+ + ++ Y+
Sbjct: 3 DERLKDLFGKFGPALSVKVMMDEGGTSKGFGFVSFKRHEDTQKAVDEVNGKELNRKQIYI 62
Query: 282 GKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSC 341
+A K +E + EL+ +FE ++ ++QG+NLY+KNL D ID+ L++ FS FGTIT
Sbjct: 63 SRAHKTAEWQTELRCKFEHMNQDRATRYQGVNLYVKNLDDGIDEGCLQKEFSPFGTITGA 122
Query: 342 KVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQF 401
K M + G S+G GFV FS+PEEA++A+ EMNG+++ +KPL VA+AQRKEER+A L Q+
Sbjct: 123 KFMME-GGPSEGFGFVRFSSPEEATKAVTEMNGRIVATKPLCVALAQRKEERQAHLTNQY 181
Query: 402 SQMRPVAMGPSVPPRMPMYPPGPS 425
M+ +A +VP P+ P S
Sbjct: 182 --MQRMASVRAVPN--PVILPATS 201
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/187 (37%), Positives = 103/187 (55%), Gaps = 15/187 (8%)
Query: 129 IDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQV 188
+D + L D F FG LS K+ D G SKGFGFV F+ E Q A+D++NG +N KQ+
Sbjct: 1 MDDERLKDLFGKFGPALSVKVMMDEGGTSKGFGFVSFKRHEDTQKAVDEVNGKELNRKQI 60
Query: 189 FVGHFLRKQERETVAIKTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTI 235
++ + E +T ++ KF N++VKNLD+ + L+K F +GTI
Sbjct: 61 YISRAHKTAEWQT-ELRCKFEHMNQDRATRYQGVNLYVKNLDDGIDEGCLQKEFSPFGTI 119
Query: 236 TSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELK 295
T A M +G G S+ FGFV F + ++A KAV +NG+ + V AQ+K ER+ L
Sbjct: 120 TGAKFMMEG-GPSEGFGFVRFSSPEEATKAVTEMNGRIVATKPLCVALAQRKEERQAHLT 178
Query: 296 GQFEQAM 302
Q+ Q M
Sbjct: 179 NQYMQRM 185
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 90/175 (51%), Gaps = 20/175 (11%)
Query: 43 DSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIR 102
D +L DLF + G LSV+V D S G+G+V++ D +A+D +N LN K I
Sbjct: 3 DERLKDLFGKFGPALSVKVMMD-EGGTSKGFGFVSFKRHEDTQKAVDEVNGKELNRKQIY 61
Query: 103 IMYSHR-----------------DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNIL 145
I +H+ D + R G N+++KNLD ID L FS FG I
Sbjct: 62 ISRAHKTAEWQTELRCKFEHMNQDRATRYQGV-NLYVKNLDDGIDEGCLQKEFSPFGTIT 120
Query: 146 SCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERE 200
K +G G S+GFGFV+F + E A A+ ++NG ++ K + V RK+ER+
Sbjct: 121 GAKFMMEG-GPSEGFGFVRFSSPEEATKAVTEMNGRIVATKPLCVALAQRKEERQ 174
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 52/82 (63%)
Query: 323 IDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPL 382
+DDE+LK+LF +FG S KVM D G SKG GFV+F E+ +A+ E+NGK + K +
Sbjct: 1 MDDERLKDLFGKFGPALSVKVMMDEGGTSKGFGFVSFKRHEDTQKAVDEVNGKELNRKQI 60
Query: 383 YVAVAQRKEERRARLQAQFSQM 404
Y++ A + E + L+ +F M
Sbjct: 61 YISRAHKTAEWQTELRCKFEHM 82
>gi|93359570|gb|ABF13311.1| poly-A binding protein, partial [Phaseolus vulgaris]
Length = 172
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 88/108 (81%), Positives = 97/108 (89%), Gaps = 1/108 (0%)
Query: 337 TITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRAR 396
TITSCKVMRDP+G+S+GSGFVAFSTPEEASRALAEMNGKM+VSKPLYV +AQRKE+RRAR
Sbjct: 1 TITSCKVMRDPNGVSRGSGFVAFSTPEEASRALAEMNGKMVVSKPLYVTLAQRKEDRRAR 60
Query: 397 LQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPPQ 444
LQAQF+QMRPV M PSV PR+PMYPPG G+GQQ Y Q PPAIIP Q
Sbjct: 61 LQAQFAQMRPVGMPPSVGPRVPMYPPGGPGIGQQIFY-QGPPAIIPSQ 107
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 41/67 (61%)
Query: 234 TITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQE 293
TITS VMRD +G S+ GFV F ++A++A+ +NGK + YV AQ+K +R
Sbjct: 1 TITSCKVMRDPNGVSRGSGFVAFSTPEEASRALAEMNGKMVVSKPLYVTLAQRKEDRRAR 60
Query: 294 LKGQFEQ 300
L+ QF Q
Sbjct: 61 LQAQFAQ 67
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%)
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
I SCK+ D +G S+G GFV F E A A+ ++NG ++ K ++V RK++R
Sbjct: 1 TITSCKVMRDPNGVSRGSGFVAFSTPEEASRALAEMNGKMVVSKPLYVTLAQRKEDRRA 59
>gi|13365527|dbj|BAB39137.1| poly(A)-binding protein [Carassius auratus]
Length = 154
Score = 178 bits (452), Expect = 6e-42, Method: Composition-based stats.
Identities = 87/153 (56%), Positives = 111/153 (72%), Gaps = 3/153 (1%)
Query: 104 MYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFV 163
M+S RDP +RKSG GNIFIKN+D+SID+KAL+DT S+FGNILSCK+ D +G SKG+GFV
Sbjct: 1 MWSQRDPGLRKSGVGNIFIKNMDESIDNKALYDTSSAFGNILSCKVVCDENG-SKGYGFV 59
Query: 164 QFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER--ETVAIKTKFNNVFVKNLDESTT 221
FE +E+A AI+ +NGML+ND++VFVGHF ++ER E A +F NV++KN E
Sbjct: 60 HFETQEAANRAIETMNGMLLNDRKVFVGHFKSRKERMAEMGAKAMEFTNVYIKNFSEDID 119
Query: 222 DEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFV 254
E LK IF E+G S VM D G S+ FGFV
Sbjct: 120 REKLKSIFSEFGKTLSVCVMTDESGCSRGFGFV 152
Score = 112 bits (279), Expect = 7e-22, Method: Composition-based stats.
Identities = 65/160 (40%), Positives = 94/160 (58%), Gaps = 11/160 (6%)
Query: 198 ERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFE 257
+R+ K+ N+F+KN+DES ++ L +G I S V+ D +G SK +GFV+FE
Sbjct: 4 QRDPGLRKSGVGNIFIKNMDESIDNKALYDTSSAFGNILSCKVVCDENG-SKGYGFVHFE 62
Query: 258 NADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIK 317
+ A +A+E +NG +DR+ +VG + + ER E+ + AM+ T N+YIK
Sbjct: 63 TQEAANRAIETMNGMLLNDRKVFVGHFKSRKERMAEMGAK---AMEFT-------NVYIK 112
Query: 318 NLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFV 357
N + ID EKLK +FSEFG S VM D SG S+G GFV
Sbjct: 113 NFSEDIDREKLKSIFSEFGKTLSVCVMTDESGCSRGFGFV 152
Score = 80.5 bits (197), Expect = 3e-12, Method: Composition-based stats.
Identities = 46/139 (33%), Positives = 76/139 (54%), Gaps = 8/139 (5%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ ++D ++ + LYD S G +LS +V D S GYG+V++ A RA++
Sbjct: 16 NIFIKNMDESIDNKALYDTSSAFGNILSCKVVCD--ENGSKGYGFVHFETQEAANRAIET 73
Query: 91 LNFTPLNNKSIRI-MYSHRDPSIRKSGTG-----NIFIKNLDKSIDHKALHDTFSSFGNI 144
+N LN++ + + + R + + G N++IKN + ID + L FS FG
Sbjct: 74 MNGMLLNDRKVFVGHFKSRKERMAEMGAKAMEFTNVYIKNFSEDIDREKLKSIFSEFGKT 133
Query: 145 LSCKIATDGSGQSKGFGFV 163
LS + TD SG S+GFGFV
Sbjct: 134 LSVCVMTDESGCSRGFGFV 152
Score = 75.1 bits (183), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/88 (43%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
Query: 313 NLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEM 372
N++IKN+ +SID++ L + S FG I SCKV+ D +G SKG GFV F T E A+RA+ M
Sbjct: 16 NIFIKNMDESIDNKALYDTSSAFGNILSCKVVCDENG-SKGYGFVHFETQEAANRAIETM 74
Query: 373 NGKMIVSKPLYVAVAQRKEERRARLQAQ 400
NG ++ + ++V + ++ER A + A+
Sbjct: 75 NGMLLNDRKVFVGHFKSRKERMAEMGAK 102
>gi|222640326|gb|EEE68458.1| hypothetical protein OsJ_26852 [Oryza sativa Japonica Group]
Length = 252
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 97/152 (63%), Positives = 116/152 (76%), Gaps = 4/152 (2%)
Query: 444 QMPPRGH--AYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALST 501
QM PRG YRY GR M D F G G ++P P +MG +P DA +PI AL++
Sbjct: 103 QMLPRGSRGGYRYASGRGMPDNAFR-GVGGLVPSPYEMGR-MPLSDAGAPPQVPIGALAS 160
Query: 502 ALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVA 561
ALAN+ P+QQR +LGESLYPLV+QLE D AAKVTGMLLEMDQTEVLHL+ESP+ALKAKVA
Sbjct: 161 ALANSPPDQQRLMLGESLYPLVDQLEHDQAAKVTGMLLEMDQTEVLHLIESPDALKAKVA 220
Query: 562 EAMEVLRSVAQQQANNPADQLASLSLNENLVS 593
EAMEVLR+ QQQAN P DQLA+L+L++ +VS
Sbjct: 221 EAMEVLRNAQQQQANTPTDQLAALTLSDGVVS 252
>gi|34015127|gb|AAQ56324.1| putative poly(A)-binding protein [Oryza sativa Japonica Group]
Length = 266
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 97/152 (63%), Positives = 116/152 (76%), Gaps = 4/152 (2%)
Query: 444 QMPPRGH--AYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALST 501
QM PRG YRY GR M D F G G ++P P +MG +P DA +PI AL++
Sbjct: 117 QMLPRGSRGGYRYASGRGMPDNAFR-GVGGLVPSPYEMGR-MPLSDAGAPPQVPIGALAS 174
Query: 502 ALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVA 561
ALAN+ P+QQR +LGESLYPLV+QLE D AAKVTGMLLEMDQTEVLHL+ESP+ALKAKVA
Sbjct: 175 ALANSPPDQQRLMLGESLYPLVDQLEHDQAAKVTGMLLEMDQTEVLHLIESPDALKAKVA 234
Query: 562 EAMEVLRSVAQQQANNPADQLASLSLNENLVS 593
EAMEVLR+ QQQAN P DQLA+L+L++ +VS
Sbjct: 235 EAMEVLRNAQQQQANTPTDQLAALTLSDGVVS 266
>gi|218200922|gb|EEC83349.1| hypothetical protein OsI_28748 [Oryza sativa Indica Group]
Length = 252
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 97/152 (63%), Positives = 116/152 (76%), Gaps = 4/152 (2%)
Query: 444 QMPPRGH--AYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALST 501
QM PRG YRY GR M D F G G ++P P +MG +P DA +PI AL++
Sbjct: 103 QMLPRGSRGGYRYASGRGMPDNAFR-GVGGLVPSPYEMGR-MPLSDAGAPPQVPIGALAS 160
Query: 502 ALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVA 561
ALAN+ P+QQR +LGESLYPLV+QLE D AAKVTGMLLEMDQTEVLHL+ESP+ALKAKVA
Sbjct: 161 ALANSPPDQQRLMLGESLYPLVDQLEHDQAAKVTGMLLEMDQTEVLHLIESPDALKAKVA 220
Query: 562 EAMEVLRSVAQQQANNPADQLASLSLNENLVS 593
EAMEVLR+ QQQAN P DQLA+L+L++ +VS
Sbjct: 221 EAMEVLRNAQQQQANTPTDQLAALTLSDGVVS 252
>gi|125811664|ref|XP_001361971.1| GA18301 [Drosophila pseudoobscura pseudoobscura]
gi|195171077|ref|XP_002026337.1| GL20391 [Drosophila persimilis]
gi|54637147|gb|EAL26550.1| GA18301 [Drosophila pseudoobscura pseudoobscura]
gi|194111239|gb|EDW33282.1| GL20391 [Drosophila persimilis]
Length = 296
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 88/189 (46%), Positives = 136/189 (71%), Gaps = 2/189 (1%)
Query: 117 TGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAID 176
+G I+IKNL++SID+KA++DTFS FGNIL+C +A D G S+G+GFV F+++E+A+ AI+
Sbjct: 101 SGKIYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIE 160
Query: 177 KLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTIT 236
K+NGML N+++V V F+ +++RE T F N++VKNL E T++ L+++F YG IT
Sbjct: 161 KVNGMLCNNQKVHVVKFIPRRDREQEKA-THFKNLYVKNLSEEFTEQHLREMFEPYGRIT 219
Query: 237 SAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREW-YVGKAQKKSEREQELK 295
S +M D +G+S+ FGFV FEN A AV L+GK+ D ++ YV +A K+ER+QE+
Sbjct: 220 SHKLMLDEEGRSRRFGFVAFENPQSALAAVIGLHGKQLGDNKFLYVARALSKAERQQEIN 279
Query: 296 GQFEQAMKE 304
+ E+ ++
Sbjct: 280 RKLEERKRQ 288
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 112/201 (55%), Gaps = 14/201 (6%)
Query: 211 VFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALN 270
+++KNL+ S ++ + F +G I + V +D DG S+ +GFV+F++ + A A+E +N
Sbjct: 104 IYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEKVN 163
Query: 271 GKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKE 330
G ++++ +V K + +REQE F+ NLY+KNL + ++ L+E
Sbjct: 164 GMLCNNQKVHVVKFIPRRDREQEKATHFK-------------NLYVKNLSEEFTEQHLRE 210
Query: 331 LFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIV-SKPLYVAVAQR 389
+F +G ITS K+M D G S+ GFVAF P+ A A+ ++GK + +K LYVA A
Sbjct: 211 MFEPYGRITSHKLMLDEEGRSRRFGFVAFENPQSALAAVIGLHGKQLGDNKFLYVARALS 270
Query: 390 KEERRARLQAQFSQMRPVAMG 410
K ER+ + + + + G
Sbjct: 271 KAERQQEINRKLEERKRQKAG 291
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 95/173 (54%), Gaps = 5/173 (2%)
Query: 32 LYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVL 91
+Y+ +L+ ++ + +YD FS G +L+ V +D S GYG+V++ + A A++ +
Sbjct: 104 IYIKNLERSIDNKAVYDTFSVFGNILNCNVAKD-EDGNSRGYGFVHFDSEEAARAAIEKV 162
Query: 92 NFTPLNNKSIRIM--YSHRDPSIRKSGT-GNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
N NN+ + ++ RD K+ N+++KNL + + L + F +G I S K
Sbjct: 163 NGMLCNNQKVHVVKFIPRRDREQEKATHFKNLYVKNLSEEFTEQHLREMFEPYGRITSHK 222
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLIND-KQVFVGHFLRKQERE 200
+ D G+S+ FGFV FEN +SA A+ L+G + D K ++V L K ER+
Sbjct: 223 LMLDEEGRSRRFGFVAFENPQSALAAVIGLHGKQLGDNKFLYVARALSKAERQ 275
>gi|47229360|emb|CAF99348.1| unnamed protein product [Tetraodon nigroviridis]
Length = 128
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 81/125 (64%), Positives = 99/125 (79%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
S + SLYVGDL +VT++ LY+ FS G +LS+RVCRD+ TRRSLGY YVN+ PA
Sbjct: 4 SAASYPMASLYVGDLHPDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQPA 63
Query: 83 DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
DA RALD +NF + + +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FG
Sbjct: 64 DAERALDTMNFDVIKGRPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFG 123
Query: 143 NILSC 147
NILSC
Sbjct: 124 NILSC 128
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 66/131 (50%), Gaps = 5/131 (3%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFEN 167
+PS ++++ +L + L++ FS G ILS ++ D + +S G+ +V F+
Sbjct: 2 NPSAASYPMASLYVGDLHPDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
A+ A+D +N +I + V + +R+ K+ N+F+KNLD+S ++ L
Sbjct: 62 PADAERALDTMNFDVIKGRPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYD 117
Query: 228 IFGEYGTITSA 238
F +G I S
Sbjct: 118 TFSAFGNILSC 128
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 61/133 (45%), Gaps = 17/133 (12%)
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENADDAAKAVEA 268
+++V +L T+ L + F G I S V RD +S + +VNF+ DA +A++
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
+N R + +Q+ + G N++IKNL SID++ L
Sbjct: 72 MNFDVIKGRPVRIMWSQRDPSLRKSGVG----------------NIFIKNLDKSIDNKAL 115
Query: 329 KELFSEFGTITSC 341
+ FS FG I SC
Sbjct: 116 YDTFSAFGNILSC 128
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Query: 302 MKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRD-PSGISKGSGFVAFS 360
M + + +LY+ +L + + L E FS G I S +V RD + S G +V F
Sbjct: 1 MNPSAASYPMASLYVGDLHPDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQ 60
Query: 361 TPEEASRALAEMNGKMIVSKPLYVAVAQRKEERR 394
P +A RAL MN +I +P+ + +QR R
Sbjct: 61 QPADAERALDTMNFDVIKGRPVRIMWSQRDPSLR 94
>gi|396082305|gb|AFN83915.1| polyadenylate-binding protein 2 [Encephalitozoon romaleae SJ-2008]
Length = 415
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 111/289 (38%), Positives = 164/289 (56%), Gaps = 16/289 (5%)
Query: 117 TGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAI- 175
TGNIF+KNL +S K L D FS FG I+SCK+AT G+SKG+GFVQF+ K++A+ I
Sbjct: 10 TGNIFVKNLPESFTSKDLDDAFSMFGEIVSCKVATTPQGKSKGYGFVQFKEKKAAKKVIK 69
Query: 176 --DKLNGMLINDKQVFVGHF---LRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFG 230
+ LNG+++ ++ V + ++K E + V+ T F N F+KN TT+++L ++
Sbjct: 70 NFNNLNGLMLGGNKIAVELYNPDMKKGESKKVS--TMFTNCFIKNFPVDTTEKELLELLV 127
Query: 231 EYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGK-KFDDRE-----WYVGKA 284
YG +TS DGK K F F NFE+ + A A+ L+G FD + +Y+ K
Sbjct: 128 RYGKVTSLYFPIKDDGKPKGFAFANFESHESALNAINNLHGAFPFDSSKDGGEPFYIQKG 187
Query: 285 QKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVM 344
Q+K ER +EL+ FEQ + + NLYI N+ + E+L +F EFG+ITS V
Sbjct: 188 QRKEERAEELRKMFEQLSMQGQSYRK--NLYITNIPEGFGAEELNNIFKEFGSITSMSVG 245
Query: 345 RDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEER 393
D + K ++ +STPEEAS A+ N + L V+ + K ER
Sbjct: 246 IDGANSQKQYAYICYSTPEEASIAVERGNEIYLDGNRLQVSYFKNKLER 294
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 132/291 (45%), Gaps = 29/291 (9%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
T +++V +L + T L D FS G+++S +V +S GYG+V + A + +
Sbjct: 10 TGNIFVKNLPESFTSKDLDDAFSMFGEIVSCKVA-TTPQGKSKGYGFVQFKEKKAAKKVI 68
Query: 89 DVLNFTPLNNKSI---RIMYSHRDPSIRKSGT-------GNIFIKNLDKSIDHKALHDTF 138
NF LN + +I +P ++K + N FIKN K L +
Sbjct: 69 K--NFNNLNGLMLGGNKIAVELYNPDMKKGESKKVSTMFTNCFIKNFPVDTTEKELLELL 126
Query: 139 SSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQ------VFVGH 192
+G + S G+ KGF F FE+ ESA NAI+ L+G D ++
Sbjct: 127 VRYGKVTSLYFPIKDDGKPKGFAFANFESHESALNAINNLHGAFPFDSSKDGGEPFYIQK 186
Query: 193 FLRKQER--------ETVAIK--TKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMR 242
RK+ER E ++++ + N+++ N+ E E+L IF E+G+ITS V
Sbjct: 187 GQRKEERAEELRKMFEQLSMQGQSYRKNLYITNIPEGFGAEELNNIFKEFGSITSMSVGI 246
Query: 243 DGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQE 293
DG K + ++ + ++A+ AVE N D V + K ER +E
Sbjct: 247 DGANSQKQYAYICYSTPEEASIAVERGNEIYLDGNRLQVSYFKNKLERMKE 297
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 95/225 (42%), Gaps = 35/225 (15%)
Query: 194 LRKQER--ETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCF 251
+RK ER ET N+FVKNL ES T +DL F +G I S V GKSK +
Sbjct: 1 MRKDERPPET-------GNIFVKNLPESFTSKDLDDAFSMFGEIVSCKVATTPQGKSKGY 53
Query: 252 GFVNFENADDAAKAVEA---LNGKKFDDREWYV---GKAQKKSEREQELKGQFEQAMKET 305
GFV F+ A K ++ LNG + V KK E K+
Sbjct: 54 GFVQFKEKKAAKKVIKNFNNLNGLMLGGNKIAVELYNPDMKKGES------------KKV 101
Query: 306 VDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEA 365
F N +IKN +++L EL +G +TS G KG F F + E A
Sbjct: 102 STMFT--NCFIKNFPVDTTEKELLELLVRYGKVTSLYFPIKDDGKPKGFAFANFESHESA 159
Query: 366 SRALAEMNGKMIV------SKPLYVAVAQRKEERRARLQAQFSQM 404
A+ ++G +P Y+ QRKEER L+ F Q+
Sbjct: 160 LNAINNLHGAFPFDSSKDGGEPFYIQKGQRKEERAEELRKMFEQL 204
>gi|194757405|ref|XP_001960955.1| GF11244 [Drosophila ananassae]
gi|190622253|gb|EDV37777.1| GF11244 [Drosophila ananassae]
Length = 307
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 91/203 (44%), Positives = 140/203 (68%), Gaps = 7/203 (3%)
Query: 103 IMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGF 162
I+ S+ P RK I+IKNL++SID+KA++DTFS FGNIL+C +A D G S+G+GF
Sbjct: 103 IINSNSTPDSRK-----IYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGF 157
Query: 163 VQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTD 222
V F+ +E+A+ AI+K+NGML N+++V V F+ +++RE T F N++VKNL E T+
Sbjct: 158 VHFDTEEAARAAIEKVNGMLCNNQKVHVVKFIPRRDREQEKA-THFKNLYVKNLGEEFTE 216
Query: 223 EDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREW-YV 281
+ L+++F YG ITS +M D +G+S+ FGFV +EN A AV L+GK+ D ++ YV
Sbjct: 217 QHLREMFEPYGRITSHKLMLDDEGRSRRFGFVAYENPQSALAAVIGLHGKQLGDNKFLYV 276
Query: 282 GKAQKKSEREQELKGQFEQAMKE 304
+A K+ER+QE+ + E+ ++
Sbjct: 277 ARALSKAERQQEINRKLEERKRQ 299
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 112/201 (55%), Gaps = 14/201 (6%)
Query: 211 VFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALN 270
+++KNL+ S ++ + F +G I + V +D DG S+ +GFV+F+ + A A+E +N
Sbjct: 115 IYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDTEEAARAAIEKVN 174
Query: 271 GKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKE 330
G ++++ +V K + +REQE F+ NLY+KNLG+ ++ L+E
Sbjct: 175 GMLCNNQKVHVVKFIPRRDREQEKATHFK-------------NLYVKNLGEEFTEQHLRE 221
Query: 331 LFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIV-SKPLYVAVAQR 389
+F +G ITS K+M D G S+ GFVA+ P+ A A+ ++GK + +K LYVA A
Sbjct: 222 MFEPYGRITSHKLMLDDEGRSRRFGFVAYENPQSALAAVIGLHGKQLGDNKFLYVARALS 281
Query: 390 KEERRARLQAQFSQMRPVAMG 410
K ER+ + + + + G
Sbjct: 282 KAERQQEINRKLEERKRQKAG 302
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 105/198 (53%), Gaps = 12/198 (6%)
Query: 14 GPNGVAAGASGNQFLTTS-------LYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLS 66
G +A+G+SG + ++ +Y+ +L+ ++ + +YD FS G +L+ V +D
Sbjct: 90 GAGALASGSSGGGIINSNSTPDSRKIYIKNLERSIDNKAVYDTFSVFGNILNCNVAKD-E 148
Query: 67 TRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIM--YSHRDPSIRKSGT-GNIFIK 123
S GYG+V++ A A++ +N NN+ + ++ RD K+ N+++K
Sbjct: 149 DGNSRGYGFVHFDTEEAARAAIEKVNGMLCNNQKVHVVKFIPRRDREQEKATHFKNLYVK 208
Query: 124 NLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLI 183
NL + + L + F +G I S K+ D G+S+ FGFV +EN +SA A+ L+G +
Sbjct: 209 NLGEEFTEQHLREMFEPYGRITSHKLMLDDEGRSRRFGFVAYENPQSALAAVIGLHGKQL 268
Query: 184 ND-KQVFVGHFLRKQERE 200
D K ++V L K ER+
Sbjct: 269 GDNKFLYVARALSKAERQ 286
>gi|123445099|ref|XP_001311313.1| Polyadenylate-binding protein [Trichomonas vaginalis G3]
gi|121893117|gb|EAX98383.1| Polyadenylate-binding protein, putative [Trichomonas vaginalis G3]
Length = 419
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 130/374 (34%), Positives = 191/374 (51%), Gaps = 21/374 (5%)
Query: 32 LYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVL 91
L+VGDL V + + +LF + G S + + +V + + A RAL +
Sbjct: 8 LFVGDLPGYVDGNFIKELFREYGNFPSGTITVKKHKSLDKSFAFVTFESHELARRALLEV 67
Query: 92 NFTPLNNKSIRIMYSHRDPSIR---KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
N+T L+ IRI++S DP+ + K + I +LD+ I+ LHD FS+FG ++SCK
Sbjct: 68 NYTKLDGVPIRILWS--DPATKRAIKKDFCTLIIFDLDEYIEAAQLHDIFSNFGEVVSCK 125
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFL---RKQERETVAIK 205
I +G+ +G G+V F +E A + L IN K + + + RK ET
Sbjct: 126 IPL-TNGKPRGDGYVTFYKEEDAMRVKNDLAQASINGKPIQIVLYCKPTRKNSEET---- 180
Query: 206 TKFNNVFVKNL--DESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAA 263
F NVF+K L T+EDL K+ ++G + + + DG S FGF NF DA
Sbjct: 181 --FTNVFIKPLLVKYFKTNEDLAKLMKDFGEFVNPSIKFNDDGTSSEFGFCNFMYHQDAV 238
Query: 264 KAVEALNGKKF--DDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGD 321
KAVE+LNGK + E+ +AQ K+ER+ L Q + + ++ +G NLYIKN+
Sbjct: 239 KAVESLNGKMHISGEFEFVCCRAQTKAERQAFLAEQSAEFRRRLYEETRGRNLYIKNIDR 298
Query: 322 SIDDEKLKELFSEFGTITSCKVMRDPS--GISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
SI+DE+ +E F +FG + C + R+ SKG GFV F T E A AL +
Sbjct: 299 SINDEEFEEYFKQFGEVEKCLISREAQEPHESKGFGFVLFKTKEGAQNALKNTIITPLKG 358
Query: 380 KPLYVAVAQRKEER 393
K LYV KEER
Sbjct: 359 KILYVNYFIMKEER 372
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 133/284 (46%), Gaps = 21/284 (7%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
+L + DLD + +QL+D+FS G+V+S ++ L+ + G GYV + DA R +
Sbjct: 95 CTLIIFDLDEYIEAAQLHDIFSNFGEVVSCKI--PLTNGKPRGDGYVTFYKEEDAMRVKN 152
Query: 90 VLNFTPLNNKSIRI-MYSHRDPSIRKSGTGNIFIKNLDKSI--DHKALHDTFSSFGNILS 146
L +N K I+I +Y + N+FIK L ++ L FG ++
Sbjct: 153 DLAQASINGKPIQIVLYCKPTRKNSEETFTNVFIKPLLVKYFKTNEDLAKLMKDFGEFVN 212
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNG-MLINDKQVFVGH----------FLR 195
I + G S FGF F + A A++ LNG M I+ + FV FL
Sbjct: 213 PSIKFNDDGTSSEFGFCNFMYHQDAVKAVESLNGKMHISGEFEFVCCRAQTKAERQAFLA 272
Query: 196 KQE---RETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGD--GKSKC 250
+Q R + +T+ N+++KN+D S DE+ ++ F ++G + ++ R+ +SK
Sbjct: 273 EQSAEFRRRLYEETRGRNLYIKNIDRSINDEEFEEYFKQFGEVEKCLISREAQEPHESKG 332
Query: 251 FGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQEL 294
FGFV F+ + A A++ + YV K ERE L
Sbjct: 333 FGFVLFKTKEGAQNALKNTIITPLKGKILYVNYFIMKEEREHIL 376
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 83/183 (45%), Gaps = 23/183 (12%)
Query: 208 FNNVFVKNLDESTTDEDLKKIFGEYGTITS-AVVMRDGDGKSKCFGFVNFENADDAAKAV 266
+ +FV +L +K++F EYG S + ++ K F FV FE+ + A +A+
Sbjct: 5 WKELFVGDLPGYVDGNFIKELFREYGNFPSGTITVKKHKSLDKSFAFVTFESHELARRAL 64
Query: 267 EALNGKKFDD---REWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSI 323
+N K D R + A K++ +K F L I +L + I
Sbjct: 65 LEVNYTKLDGVPIRILWSDPATKRA-----IKKDF-------------CTLIIFDLDEYI 106
Query: 324 DDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLY 383
+ +L ++FS FG + SCK+ +G +G G+V F E+A R ++ I KP+
Sbjct: 107 EAAQLHDIFSNFGEVVSCKIPL-TNGKPRGDGYVTFYKEEDAMRVKNDLAQASINGKPIQ 165
Query: 384 VAV 386
+ +
Sbjct: 166 IVL 168
>gi|19922904|ref|NP_611924.1| CG4612, isoform A [Drosophila melanogaster]
gi|386768569|ref|NP_001246493.1| CG4612, isoform C [Drosophila melanogaster]
gi|195353161|ref|XP_002043074.1| GM11822 [Drosophila sechellia]
gi|195586434|ref|XP_002082979.1| GD24944 [Drosophila simulans]
gi|7291799|gb|AAF47219.1| CG4612, isoform A [Drosophila melanogaster]
gi|16648374|gb|AAL25452.1| LD36772p [Drosophila melanogaster]
gi|194127162|gb|EDW49205.1| GM11822 [Drosophila sechellia]
gi|194194988|gb|EDX08564.1| GD24944 [Drosophila simulans]
gi|220946122|gb|ACL85604.1| CG4612-PA [synthetic construct]
gi|220955844|gb|ACL90465.1| CG4612-PA [synthetic construct]
gi|383302680|gb|AFH08246.1| CG4612, isoform C [Drosophila melanogaster]
Length = 307
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 86/186 (46%), Positives = 134/186 (72%), Gaps = 2/186 (1%)
Query: 120 IFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLN 179
I+IKNL++SID+KA++DTFS FGNIL+C +A D G S+G+GFV F+++E+A+ AI+K+N
Sbjct: 115 IYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEKVN 174
Query: 180 GMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAV 239
GML N+++V V F+ +++RE T F N++VKNL E T++ L+++F YG ITS
Sbjct: 175 GMLCNNQKVHVVKFIPRRDREQEKA-THFKNLYVKNLSEEFTEQHLREMFEPYGRITSHK 233
Query: 240 VMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREW-YVGKAQKKSEREQELKGQF 298
+M D +G+S+ FGFV +EN A AV L+GK+ D ++ YV +A K+ER+QE+ +
Sbjct: 234 LMLDEEGRSRRFGFVAYENPQSALAAVIGLHGKQLGDNKFLYVARALSKAERQQEINRKL 293
Query: 299 EQAMKE 304
E+ ++
Sbjct: 294 EERKRQ 299
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 112/201 (55%), Gaps = 14/201 (6%)
Query: 211 VFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALN 270
+++KNL+ S ++ + F +G I + V +D DG S+ +GFV+F++ + A A+E +N
Sbjct: 115 IYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEKVN 174
Query: 271 GKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKE 330
G ++++ +V K + +REQE F+ NLY+KNL + ++ L+E
Sbjct: 175 GMLCNNQKVHVVKFIPRRDREQEKATHFK-------------NLYVKNLSEEFTEQHLRE 221
Query: 331 LFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIV-SKPLYVAVAQR 389
+F +G ITS K+M D G S+ GFVA+ P+ A A+ ++GK + +K LYVA A
Sbjct: 222 MFEPYGRITSHKLMLDEEGRSRRFGFVAYENPQSALAAVIGLHGKQLGDNKFLYVARALS 281
Query: 390 KEERRARLQAQFSQMRPVAMG 410
K ER+ + + + + G
Sbjct: 282 KAERQQEINRKLEERKRQKAG 302
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 95/173 (54%), Gaps = 5/173 (2%)
Query: 32 LYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVL 91
+Y+ +L+ ++ + +YD FS G +L+ V +D S GYG+V++ + A A++ +
Sbjct: 115 IYIKNLERSIDNKAVYDTFSVFGNILNCNVAKD-EDGNSRGYGFVHFDSEEAARAAIEKV 173
Query: 92 NFTPLNNKSIRIM--YSHRDPSIRKSGT-GNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
N NN+ + ++ RD K+ N+++KNL + + L + F +G I S K
Sbjct: 174 NGMLCNNQKVHVVKFIPRRDREQEKATHFKNLYVKNLSEEFTEQHLREMFEPYGRITSHK 233
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLIND-KQVFVGHFLRKQERE 200
+ D G+S+ FGFV +EN +SA A+ L+G + D K ++V L K ER+
Sbjct: 234 LMLDEEGRSRRFGFVAYENPQSALAAVIGLHGKQLGDNKFLYVARALSKAERQ 286
>gi|194886456|ref|XP_001976617.1| GG19920 [Drosophila erecta]
gi|190659804|gb|EDV57017.1| GG19920 [Drosophila erecta]
Length = 307
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 86/186 (46%), Positives = 134/186 (72%), Gaps = 2/186 (1%)
Query: 120 IFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLN 179
I+IKNL++SID+KA++DTFS FGNIL+C +A D G S+G+GFV F+++E+A+ AI+K+N
Sbjct: 115 IYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEKVN 174
Query: 180 GMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAV 239
GML N+++V V F+ +++RE T F N++VKNL E T++ L+++F YG ITS
Sbjct: 175 GMLCNNQKVHVVKFIPRRDREQEKA-THFKNLYVKNLSEEFTEQHLREMFEPYGRITSHK 233
Query: 240 VMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREW-YVGKAQKKSEREQELKGQF 298
+M D +G+S+ FGFV +EN A AV L+GK+ D ++ YV +A K+ER+QE+ +
Sbjct: 234 LMLDEEGRSRRFGFVAYENPQSALAAVIGLHGKQLGDNKFLYVARALSKAERQQEINRKL 293
Query: 299 EQAMKE 304
E+ ++
Sbjct: 294 EERKRQ 299
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 112/201 (55%), Gaps = 14/201 (6%)
Query: 211 VFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALN 270
+++KNL+ S ++ + F +G I + V +D DG S+ +GFV+F++ + A A+E +N
Sbjct: 115 IYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEKVN 174
Query: 271 GKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKE 330
G ++++ +V K + +REQE F+ NLY+KNL + ++ L+E
Sbjct: 175 GMLCNNQKVHVVKFIPRRDREQEKATHFK-------------NLYVKNLSEEFTEQHLRE 221
Query: 331 LFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIV-SKPLYVAVAQR 389
+F +G ITS K+M D G S+ GFVA+ P+ A A+ ++GK + +K LYVA A
Sbjct: 222 MFEPYGRITSHKLMLDEEGRSRRFGFVAYENPQSALAAVIGLHGKQLGDNKFLYVARALS 281
Query: 390 KEERRARLQAQFSQMRPVAMG 410
K ER+ + + + + G
Sbjct: 282 KAERQQEINRKLEERKRQKAG 302
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 95/173 (54%), Gaps = 5/173 (2%)
Query: 32 LYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVL 91
+Y+ +L+ ++ + +YD FS G +L+ V +D S GYG+V++ + A A++ +
Sbjct: 115 IYIKNLERSIDNKAVYDTFSVFGNILNCNVAKD-EDGNSRGYGFVHFDSEEAARAAIEKV 173
Query: 92 NFTPLNNKSIRIM--YSHRDPSIRKSGT-GNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
N NN+ + ++ RD K+ N+++KNL + + L + F +G I S K
Sbjct: 174 NGMLCNNQKVHVVKFIPRRDREQEKATHFKNLYVKNLSEEFTEQHLREMFEPYGRITSHK 233
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLIND-KQVFVGHFLRKQERE 200
+ D G+S+ FGFV +EN +SA A+ L+G + D K ++V L K ER+
Sbjct: 234 LMLDEEGRSRRFGFVAYENPQSALAAVIGLHGKQLGDNKFLYVARALSKAERQ 286
>gi|195489681|ref|XP_002092839.1| GE11444 [Drosophila yakuba]
gi|194178940|gb|EDW92551.1| GE11444 [Drosophila yakuba]
Length = 307
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 86/186 (46%), Positives = 134/186 (72%), Gaps = 2/186 (1%)
Query: 120 IFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLN 179
I+IKNL++SID+KA++DTFS FGNIL+C +A D G S+G+GFV F+++E+A+ AI+K+N
Sbjct: 115 IYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEKVN 174
Query: 180 GMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAV 239
GML N+++V V F+ +++RE T F N++VKNL E T++ L+++F YG ITS
Sbjct: 175 GMLCNNQKVHVVKFIPRRDREQEKA-THFKNLYVKNLSEEFTEQHLREMFEPYGRITSHK 233
Query: 240 VMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREW-YVGKAQKKSEREQELKGQF 298
+M D +G+S+ FGFV +EN A AV L+GK+ D ++ YV +A K+ER+QE+ +
Sbjct: 234 LMLDEEGRSRRFGFVAYENPQSALAAVIGLHGKQLGDNKFLYVARALSKAERQQEINRKL 293
Query: 299 EQAMKE 304
E+ ++
Sbjct: 294 EERKRQ 299
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 112/201 (55%), Gaps = 14/201 (6%)
Query: 211 VFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALN 270
+++KNL+ S ++ + F +G I + V +D DG S+ +GFV+F++ + A A+E +N
Sbjct: 115 IYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEKVN 174
Query: 271 GKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKE 330
G ++++ +V K + +REQE F+ NLY+KNL + ++ L+E
Sbjct: 175 GMLCNNQKVHVVKFIPRRDREQEKATHFK-------------NLYVKNLSEEFTEQHLRE 221
Query: 331 LFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIV-SKPLYVAVAQR 389
+F +G ITS K+M D G S+ GFVA+ P+ A A+ ++GK + +K LYVA A
Sbjct: 222 MFEPYGRITSHKLMLDEEGRSRRFGFVAYENPQSALAAVIGLHGKQLGDNKFLYVARALS 281
Query: 390 KEERRARLQAQFSQMRPVAMG 410
K ER+ + + + + G
Sbjct: 282 KAERQQEINRKLEERKRQKAG 302
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 95/173 (54%), Gaps = 5/173 (2%)
Query: 32 LYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVL 91
+Y+ +L+ ++ + +YD FS G +L+ V +D S GYG+V++ + A A++ +
Sbjct: 115 IYIKNLERSIDNKAVYDTFSVFGNILNCNVAKD-EDGNSRGYGFVHFDSEEAARAAIEKV 173
Query: 92 NFTPLNNKSIRIM--YSHRDPSIRKSGT-GNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
N NN+ + ++ RD K+ N+++KNL + + L + F +G I S K
Sbjct: 174 NGMLCNNQKVHVVKFIPRRDREQEKATHFKNLYVKNLSEEFTEQHLREMFEPYGRITSHK 233
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLIND-KQVFVGHFLRKQERE 200
+ D G+S+ FGFV +EN +SA A+ L+G + D K ++V L K ER+
Sbjct: 234 LMLDEEGRSRRFGFVAYENPQSALAAVIGLHGKQLGDNKFLYVARALSKAERQ 286
>gi|413918856|gb|AFW58788.1| hypothetical protein ZEAMMB73_448418 [Zea mays]
Length = 212
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 98/149 (65%), Positives = 115/149 (77%), Gaps = 4/149 (2%)
Query: 447 PRGHAYRYPLGRNMQDFPFDMG-AGSMLPVPVDMGAGIPRRDASVGQPMPITALSTALAN 505
PRG YRYP GRNM + P G AG M+ DMG G P RDA++ I L++ALAN
Sbjct: 66 PRGRMYRYPTGRNMPEAPAMPGVAGGMIQA-YDMG-GFPVRDAALSPAAQIGTLTSALAN 123
Query: 506 ASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAME 565
A+PEQQRT+LGE+LYPLVEQLE + AAKVTGMLLEMDQTEVLHLLESP+ALK+KVAEAM+
Sbjct: 124 ANPEQQRTILGENLYPLVEQLEPNQAAKVTGMLLEMDQTEVLHLLESPDALKSKVAEAMD 183
Query: 566 VLRSVAQQQANN-PADQLASLSLNENLVS 593
VLR+VA QQ N P QLA+LSL E ++S
Sbjct: 184 VLRNVAHQQNPNLPTSQLAALSLTEGIMS 212
>gi|195383760|ref|XP_002050594.1| GJ22239 [Drosophila virilis]
gi|194145391|gb|EDW61787.1| GJ22239 [Drosophila virilis]
Length = 301
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 86/186 (46%), Positives = 134/186 (72%), Gaps = 2/186 (1%)
Query: 120 IFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLN 179
I+IKNL++SID+KA+++TFS FGNIL+C +A D G S+G+GFV F+++E+A+ AI+K+N
Sbjct: 109 IYIKNLERSIDNKAVYETFSVFGNILNCNVAKDEEGNSRGYGFVHFDSEEAARAAIEKVN 168
Query: 180 GMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAV 239
GML N+++V V F+ +++RE T F N++VKNL E T++ L+++F YG ITS
Sbjct: 169 GMLCNNQKVHVVKFIPRRDREQEKA-THFKNLYVKNLSEEFTEQHLREMFEPYGRITSHK 227
Query: 240 VMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREW-YVGKAQKKSEREQELKGQF 298
+M D +G+S+ FGFV FEN A AV L+GK+ D ++ YV +A K+ER+QE+ +
Sbjct: 228 LMLDEEGRSRRFGFVAFENPQSAVAAVIGLHGKQLGDNKFLYVARALSKAERQQEINRKL 287
Query: 299 EQAMKE 304
E+ ++
Sbjct: 288 EERKRQ 293
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 113/201 (56%), Gaps = 14/201 (6%)
Query: 211 VFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALN 270
+++KNL+ S ++ + + F +G I + V +D +G S+ +GFV+F++ + A A+E +N
Sbjct: 109 IYIKNLERSIDNKAVYETFSVFGNILNCNVAKDEEGNSRGYGFVHFDSEEAARAAIEKVN 168
Query: 271 GKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKE 330
G ++++ +V K + +REQE F+ NLY+KNL + ++ L+E
Sbjct: 169 GMLCNNQKVHVVKFIPRRDREQEKATHFK-------------NLYVKNLSEEFTEQHLRE 215
Query: 331 LFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIV-SKPLYVAVAQR 389
+F +G ITS K+M D G S+ GFVAF P+ A A+ ++GK + +K LYVA A
Sbjct: 216 MFEPYGRITSHKLMLDEEGRSRRFGFVAFENPQSAVAAVIGLHGKQLGDNKFLYVARALS 275
Query: 390 KEERRARLQAQFSQMRPVAMG 410
K ER+ + + + + G
Sbjct: 276 KAERQQEINRKLEERKRQKAG 296
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 95/173 (54%), Gaps = 5/173 (2%)
Query: 32 LYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVL 91
+Y+ +L+ ++ + +Y+ FS G +L+ V +D S GYG+V++ + A A++ +
Sbjct: 109 IYIKNLERSIDNKAVYETFSVFGNILNCNVAKD-EEGNSRGYGFVHFDSEEAARAAIEKV 167
Query: 92 NFTPLNNKSIRIM--YSHRDPSIRKSGT-GNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
N NN+ + ++ RD K+ N+++KNL + + L + F +G I S K
Sbjct: 168 NGMLCNNQKVHVVKFIPRRDREQEKATHFKNLYVKNLSEEFTEQHLREMFEPYGRITSHK 227
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLIND-KQVFVGHFLRKQERE 200
+ D G+S+ FGFV FEN +SA A+ L+G + D K ++V L K ER+
Sbjct: 228 LMLDEEGRSRRFGFVAFENPQSAVAAVIGLHGKQLGDNKFLYVARALSKAERQ 280
>gi|195121744|ref|XP_002005379.1| GI19109 [Drosophila mojavensis]
gi|193910447|gb|EDW09314.1| GI19109 [Drosophila mojavensis]
Length = 300
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 86/186 (46%), Positives = 135/186 (72%), Gaps = 2/186 (1%)
Query: 120 IFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLN 179
I+IKNL++SID+KA++DTFS+FGNIL+C +A D G S+G+GFV F+++E+A+ AI+K+N
Sbjct: 108 IYIKNLERSIDNKAVYDTFSAFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEKVN 167
Query: 180 GMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAV 239
GML N+++V V F+ +++RE T F N++VKNL E T++ L+++F YG ITS
Sbjct: 168 GMLCNNQKVHVVKFIPRRDREQEKA-THFKNLYVKNLSEEFTEQHLREMFEPYGRITSHK 226
Query: 240 VMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREW-YVGKAQKKSEREQELKGQF 298
+M D +G+S+ FGFV FE+ A AV L+GK+ D ++ YV +A K+ER+QE+ +
Sbjct: 227 LMLDEEGRSRRFGFVAFESPQSALAAVIGLHGKQLGDNKFLYVARALSKAERQQEINRKL 286
Query: 299 EQAMKE 304
E+ ++
Sbjct: 287 EERKRQ 292
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 113/201 (56%), Gaps = 14/201 (6%)
Query: 211 VFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALN 270
+++KNL+ S ++ + F +G I + V +D DG S+ +GFV+F++ + A A+E +N
Sbjct: 108 IYIKNLERSIDNKAVYDTFSAFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEKVN 167
Query: 271 GKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKE 330
G ++++ +V K + +REQE F+ NLY+KNL + ++ L+E
Sbjct: 168 GMLCNNQKVHVVKFIPRRDREQEKATHFK-------------NLYVKNLSEEFTEQHLRE 214
Query: 331 LFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIV-SKPLYVAVAQR 389
+F +G ITS K+M D G S+ GFVAF +P+ A A+ ++GK + +K LYVA A
Sbjct: 215 MFEPYGRITSHKLMLDEEGRSRRFGFVAFESPQSALAAVIGLHGKQLGDNKFLYVARALS 274
Query: 390 KEERRARLQAQFSQMRPVAMG 410
K ER+ + + + + G
Sbjct: 275 KAERQQEINRKLEERKRQKAG 295
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 95/173 (54%), Gaps = 5/173 (2%)
Query: 32 LYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVL 91
+Y+ +L+ ++ + +YD FS G +L+ V +D S GYG+V++ + A A++ +
Sbjct: 108 IYIKNLERSIDNKAVYDTFSAFGNILNCNVAKD-EDGNSRGYGFVHFDSEEAARAAIEKV 166
Query: 92 NFTPLNNKSIRIM--YSHRDPSIRKSGT-GNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
N NN+ + ++ RD K+ N+++KNL + + L + F +G I S K
Sbjct: 167 NGMLCNNQKVHVVKFIPRRDREQEKATHFKNLYVKNLSEEFTEQHLREMFEPYGRITSHK 226
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLIND-KQVFVGHFLRKQERE 200
+ D G+S+ FGFV FE+ +SA A+ L+G + D K ++V L K ER+
Sbjct: 227 LMLDEEGRSRRFGFVAFESPQSALAAVIGLHGKQLGDNKFLYVARALSKAERQ 279
>gi|56971379|gb|AAH88337.1| Pabpc4 protein, partial [Rattus norvegicus]
Length = 415
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 84/140 (60%), Positives = 111/140 (79%), Gaps = 1/140 (0%)
Query: 264 KAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSI 323
KAVE +NGK+ + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL D+I
Sbjct: 1 KAVEEMNGKEMSGKSIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTI 60
Query: 324 DDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLY 383
DDEKL++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ SKPLY
Sbjct: 61 DDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLY 119
Query: 384 VAVAQRKEERRARLQAQFSQ 403
VA+AQRKEER+A L Q+ Q
Sbjct: 120 VALAQRKEERKAHLTNQYMQ 139
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 55/140 (39%), Positives = 84/140 (60%), Gaps = 15/140 (10%)
Query: 174 AIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFN-------------NVFVKNLDEST 220
A++++NG ++ K +FVG +K ER+ +K KF N+++KNLD++
Sbjct: 2 AVEEMNGKEMSGKSIFVGRAQKKVERQ-AELKRKFEQLKQERISRYQGVNLYIKNLDDTI 60
Query: 221 TDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWY 280
DE L+K F +G+ITSA VM + DG+SK FGFV F + ++A KAV +NG+ + Y
Sbjct: 61 DDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLY 119
Query: 281 VGKAQKKSEREQELKGQFEQ 300
V AQ+K ER+ L Q+ Q
Sbjct: 120 VALAQRKEERKAHLTNQYMQ 139
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 60/75 (80%), Gaps = 2/75 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A P++Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 324 PLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPE 381
Query: 555 ALKAKVAEAMEVLRS 569
+L++KV EA+ VL++
Sbjct: 382 SLRSKVDEAVAVLQA 396
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKL 178
N++IKNLD +ID + L FS FG+I S K+ + G+SKGFGFV F + E A A+ ++
Sbjct: 50 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEM 108
Query: 179 NGMLINDKQVFVGHFLRKQERE 200
NG ++ K ++V RK+ER+
Sbjct: 109 NGRIVGSKPLYVALAQRKEERK 130
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
+++ +LY+ +LD + D +L FS G + S +V L RS G+G+V +++P +A
Sbjct: 44 SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVM--LEDGRSKGFGFVCFSSPEEA 101
Query: 85 ARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNL 125
+A+ +N + +K + + + R RK+ N +++ +
Sbjct: 102 TKAVTEMNGRIVGSKPLYVALAQRKEE-RKAHLTNQYMQRV 141
>gi|195029531|ref|XP_001987626.1| GH22019 [Drosophila grimshawi]
gi|193903626|gb|EDW02493.1| GH22019 [Drosophila grimshawi]
Length = 304
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 86/186 (46%), Positives = 134/186 (72%), Gaps = 2/186 (1%)
Query: 120 IFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLN 179
I+IKNL++SID+KA+++TFS FGNIL+C +A D G S+G+GFV F+++E+A+ AI+K+N
Sbjct: 112 IYIKNLERSIDNKAVYETFSVFGNILNCNVAKDEEGNSRGYGFVHFDSEEAARAAIEKVN 171
Query: 180 GMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAV 239
GML N+++V V F+ +++RE T F N++VKNL E T++ L+++F YG ITS
Sbjct: 172 GMLCNNQKVHVVKFIPRRDREQEKA-THFKNLYVKNLSEEFTEQHLREMFEPYGRITSHK 230
Query: 240 VMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREW-YVGKAQKKSEREQELKGQF 298
+M D +G+S+ FGFV FEN A AV L+GK+ D ++ YV +A K+ER+QE+ +
Sbjct: 231 LMLDEEGRSRRFGFVAFENPQSALAAVIGLHGKQLGDNKFLYVARALSKNERQQEINRKL 290
Query: 299 EQAMKE 304
E+ ++
Sbjct: 291 EERKRQ 296
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 113/201 (56%), Gaps = 14/201 (6%)
Query: 211 VFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALN 270
+++KNL+ S ++ + + F +G I + V +D +G S+ +GFV+F++ + A A+E +N
Sbjct: 112 IYIKNLERSIDNKAVYETFSVFGNILNCNVAKDEEGNSRGYGFVHFDSEEAARAAIEKVN 171
Query: 271 GKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKE 330
G ++++ +V K + +REQE F+ NLY+KNL + ++ L+E
Sbjct: 172 GMLCNNQKVHVVKFIPRRDREQEKATHFK-------------NLYVKNLSEEFTEQHLRE 218
Query: 331 LFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIV-SKPLYVAVAQR 389
+F +G ITS K+M D G S+ GFVAF P+ A A+ ++GK + +K LYVA A
Sbjct: 219 MFEPYGRITSHKLMLDEEGRSRRFGFVAFENPQSALAAVIGLHGKQLGDNKFLYVARALS 278
Query: 390 KEERRARLQAQFSQMRPVAMG 410
K ER+ + + + + G
Sbjct: 279 KNERQQEINRKLEERKRQKAG 299
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 95/173 (54%), Gaps = 5/173 (2%)
Query: 32 LYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVL 91
+Y+ +L+ ++ + +Y+ FS G +L+ V +D S GYG+V++ + A A++ +
Sbjct: 112 IYIKNLERSIDNKAVYETFSVFGNILNCNVAKD-EEGNSRGYGFVHFDSEEAARAAIEKV 170
Query: 92 NFTPLNNKSIRIM--YSHRDPSIRKSGT-GNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
N NN+ + ++ RD K+ N+++KNL + + L + F +G I S K
Sbjct: 171 NGMLCNNQKVHVVKFIPRRDREQEKATHFKNLYVKNLSEEFTEQHLREMFEPYGRITSHK 230
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLIND-KQVFVGHFLRKQERE 200
+ D G+S+ FGFV FEN +SA A+ L+G + D K ++V L K ER+
Sbjct: 231 LMLDEEGRSRRFGFVAFENPQSALAAVIGLHGKQLGDNKFLYVARALSKNERQ 283
>gi|294875884|ref|XP_002767464.1| polyadenylate-binding protein 1-A, putative [Perkinsus marinus ATCC
50983]
gi|239869099|gb|EER00182.1| polyadenylate-binding protein 1-A, putative [Perkinsus marinus ATCC
50983]
Length = 230
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 87/175 (49%), Positives = 120/175 (68%), Gaps = 3/175 (1%)
Query: 104 MYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFV 163
M+SHRDP++R+SG GN+++KNLD++ID+KAL+DTFS FGNILSCK+A G+S+GFGFV
Sbjct: 1 MWSHRDPALRRSGAGNVYVKNLDRNIDNKALYDTFSLFGNILSCKVALTPDGKSRGFGFV 60
Query: 164 QFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDE 223
FE+ ESA+ AI KLNGM I +K V+V F + ER K F NV++K++ S +E
Sbjct: 61 HFESDESAEAAIAKLNGMQIGEKTVYVAPFKKTAERNDGTPKN-FTNVYIKHIPASWNEE 119
Query: 224 DLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDRE 278
+K+ FG +G ITS V D G+ F FVN+ + A AVE ++GK + E
Sbjct: 120 KIKEEFGAFGEITSLAVQTDPKGRR--FAFVNYAEFEQARAAVEEMDGKDVRNEE 172
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 90/168 (53%), Gaps = 15/168 (8%)
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEAL 269
NV+VKNLD + ++ L F +G I S V DGKS+ FGFV+FE+ + A A+ L
Sbjct: 16 NVYVKNLDRNIDNKALYDTFSLFGNILSCKVALTPDGKSRGFGFVHFESDESAEAAIAKL 75
Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLK 329
NG + ++ YV +K +ER F N+YIK++ S ++EK+K
Sbjct: 76 NGMQIGEKTVYVAPFKKTAERNDGTPKNF-------------TNVYIKHIPASWNEEKIK 122
Query: 330 ELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMI 377
E F FG ITS V DP G + FV ++ E+A A+ EM+GK +
Sbjct: 123 EEFGAFGEITSLAVQTDPKG--RRFAFVNYAEFEQARAAVEEMDGKDV 168
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 52/81 (64%)
Query: 313 NLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEM 372
N+Y+KNL +ID++ L + FS FG I SCKV P G S+G GFV F + E A A+A++
Sbjct: 16 NVYVKNLDRNIDNKALYDTFSLFGNILSCKVALTPDGKSRGFGFVHFESDESAEAAIAKL 75
Query: 373 NGKMIVSKPLYVAVAQRKEER 393
NG I K +YVA ++ ER
Sbjct: 76 NGMQIGEKTVYVAPFKKTAER 96
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 87/161 (54%), Gaps = 8/161 (4%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++YV +LD N+ + LYD FS G +LS +V +S G+G+V++ + A A+
Sbjct: 16 NVYVKNLDRNIDNKALYDTFSLFGNILSCKVAL-TPDGKSRGFGFVHFESDESAEAAIAK 74
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGT----GNIFIKNLDKSIDHKALHDTFSSFGNILS 146
LN + K++ + + + R GT N++IK++ S + + + + F +FG I S
Sbjct: 75 LNGMQIGEKTVYVA-PFKKTAERNDGTPKNFTNVYIKHIPASWNEEKIKEEFGAFGEITS 133
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQ 187
+ TD G+ F FV + E A+ A+++++G + +++
Sbjct: 134 LAVQTDPKGRR--FAFVNYAEFEQARAAVEEMDGKDVRNEE 172
>gi|195429621|ref|XP_002062856.1| GK19472 [Drosophila willistoni]
gi|194158941|gb|EDW73842.1| GK19472 [Drosophila willistoni]
Length = 297
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 86/186 (46%), Positives = 134/186 (72%), Gaps = 2/186 (1%)
Query: 120 IFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLN 179
I+IKNL++SID+KA++DTFS FGNIL+C +A D G S+G+GFV F+++E+A+ AI+K+N
Sbjct: 105 IYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEKVN 164
Query: 180 GMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAV 239
GML N+++V V F+ +++RE T F N++VKNL E T++ L+++F YG ITS
Sbjct: 165 GMLCNNQKVHVVKFIPRRDREQEKA-THFKNLYVKNLSEEFTEQHLREMFEPYGRITSHK 223
Query: 240 VMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREW-YVGKAQKKSEREQELKGQF 298
+M D +G+S+ FGFV FE+ A AV L+GK+ D ++ YV +A K+ER+QE+ +
Sbjct: 224 LMLDEEGRSRKFGFVAFESPQSALAAVIGLHGKQLGDNKFLYVARALSKAERQQEINRKL 283
Query: 299 EQAMKE 304
E+ ++
Sbjct: 284 EERKRQ 289
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 113/201 (56%), Gaps = 14/201 (6%)
Query: 211 VFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALN 270
+++KNL+ S ++ + F +G I + V +D DG S+ +GFV+F++ + A A+E +N
Sbjct: 105 IYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEKVN 164
Query: 271 GKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKE 330
G ++++ +V K + +REQE F+ NLY+KNL + ++ L+E
Sbjct: 165 GMLCNNQKVHVVKFIPRRDREQEKATHFK-------------NLYVKNLSEEFTEQHLRE 211
Query: 331 LFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIV-SKPLYVAVAQR 389
+F +G ITS K+M D G S+ GFVAF +P+ A A+ ++GK + +K LYVA A
Sbjct: 212 MFEPYGRITSHKLMLDEEGRSRKFGFVAFESPQSALAAVIGLHGKQLGDNKFLYVARALS 271
Query: 390 KEERRARLQAQFSQMRPVAMG 410
K ER+ + + + + G
Sbjct: 272 KAERQQEINRKLEERKRQKAG 292
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 95/173 (54%), Gaps = 5/173 (2%)
Query: 32 LYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVL 91
+Y+ +L+ ++ + +YD FS G +L+ V +D S GYG+V++ + A A++ +
Sbjct: 105 IYIKNLERSIDNKAVYDTFSVFGNILNCNVAKD-EDGNSRGYGFVHFDSEEAARAAIEKV 163
Query: 92 NFTPLNNKSIRIM--YSHRDPSIRKSGT-GNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
N NN+ + ++ RD K+ N+++KNL + + L + F +G I S K
Sbjct: 164 NGMLCNNQKVHVVKFIPRRDREQEKATHFKNLYVKNLSEEFTEQHLREMFEPYGRITSHK 223
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLIND-KQVFVGHFLRKQERE 200
+ D G+S+ FGFV FE+ +SA A+ L+G + D K ++V L K ER+
Sbjct: 224 LMLDEEGRSRKFGFVAFESPQSALAAVIGLHGKQLGDNKFLYVARALSKAERQ 276
>gi|293331471|ref|NP_001168063.1| uncharacterized protein LOC100381794 [Zea mays]
gi|223945787|gb|ACN26977.1| unknown [Zea mays]
Length = 183
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/150 (65%), Positives = 117/150 (78%), Gaps = 6/150 (4%)
Query: 447 PRG-HAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALSTALAN 505
PRG YRYP GR M D P G+++P +MG G+P R+A+ QP+PI AL+TALAN
Sbjct: 36 PRGGRGYRYPTGRGMPD-PGMHSVGAVMPPSYEMG-GMPMREAAP-QPVPIGALATALAN 92
Query: 506 ASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAME 565
A P+QQR +LGE+LYPLVEQLER+ AAKVTGMLLEMDQTEVLHLLESP+ALKAKVAEAME
Sbjct: 93 APPDQQRLMLGENLYPLVEQLEREQAAKVTGMLLEMDQTEVLHLLESPDALKAKVAEAME 152
Query: 566 VLRSVAQQQANNPA--DQLASLSLNENLVS 593
VLRS Q +N + QLA+LSLN+ +VS
Sbjct: 153 VLRSAQHLQQSNVSTEQQLANLSLNDGVVS 182
>gi|402466517|gb|EJW01988.1| hypothetical protein EDEG_03560 [Edhazardia aedis USNM 41457]
Length = 571
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/256 (40%), Positives = 150/256 (58%), Gaps = 7/256 (2%)
Query: 27 FLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRD--LSTRRSLGYGYVNYANPADA 84
L ++YVGDL+ D+ L+ LFS G VLS+++ + L + SL Y YVNY N A
Sbjct: 3 LLNRTVYVGDLNPLTLDTDLHRLFSTQGTVLSIKMIHNPNLESTGSLCYAYVNYENSDCA 62
Query: 85 ARALDVLNFTPLNNKSIRIMYSHRDPSIR--KSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
+A+ LNF L+ IR+M ++ +++ K G NI +KNL S D+K L+DTFS FG
Sbjct: 63 LKAVQNLNFAELHGTQIRVMLYNKQKNLKGQKIGKYNIIVKNLPVSCDNKTLYDTFSVFG 122
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER--E 200
+I+S K+A D + KGFGFV +++K S + AI +G +N + V FLRK++R E
Sbjct: 123 DIISSKVAVDSENKPKGFGFVCYKDKMSVKKAILLAHGTNMNGNMLKVAKFLRKEDRVVE 182
Query: 201 TVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
I+ F N ++KN ++E LK+I YG ITS VV R+ D K F F NF++
Sbjct: 183 KDKIEELFTNCYIKNFG-GLSEEQLKEICANYGEITSFVVPRNADNSLKGFAFCNFKDHV 241
Query: 261 DAAKAVEALNGKKFDD 276
A KA+E L+ +D
Sbjct: 242 SAKKAIEDLHDLSIED 257
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 74/139 (53%), Gaps = 9/139 (6%)
Query: 258 NADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIK 317
N+ D A E L ++ +Y+ +AQ + ER + LK ++A +E + + NLYI
Sbjct: 341 NSSDLNAAFENLKITTVEN--FYIQRAQTRQERHEFLKEFIKKAAEENLSYKR--NLYIT 396
Query: 318 NLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGF--VAFSTPEEASRALAEMNGK 375
L + ++ + E+FS+ GTIT+ K+ D I+ G F + + TPEEA AL N
Sbjct: 397 TLPPTASEKDVLEIFSKHGTITNFKLKSD---INTGLKFCYICYKTPEEALIALERGNET 453
Query: 376 MIVSKPLYVAVAQRKEERR 394
++ L V+ + K+ER+
Sbjct: 454 ILDGHKLNVSFFKTKKERQ 472
>gi|403372370|gb|EJY86082.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 695
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 106/337 (31%), Positives = 179/337 (53%), Gaps = 12/337 (3%)
Query: 58 SVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGT 117
S +V T + LGYGY+ + + +A R L +N LN +++RI+ H +
Sbjct: 113 SAKVVLHKRTSKPLGYGYLQFNSKEEADRCLQDMNNYVLNGQALRIV--HSVSKFDYNPK 170
Query: 118 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDK 177
N+ +KNLDK + + L D+F FG+I S K+ T G S+G+ F+QF+++E A+ A++
Sbjct: 171 ANLLVKNLDKEVTQQELFDSFKQFGDIQSLKLETYPDGSSRGYAFIQFQSEEEAEKALNA 230
Query: 178 LNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITS 237
+N I K++ + +K RE +TKFNN+FVKNL + T D+ LK +FG++G I S
Sbjct: 231 MNQAEIKGKKIEINRHEKKATRENPQ-QTKFNNLFVKNLPKGTDDDQLKGLFGKFGEIES 289
Query: 238 AVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQ 297
V RD G K +G+V F+ D A AV +N K+ DD+ V + K + E +G
Sbjct: 290 VTVQRDEQGNLKDYGYVCFKEPDHAEAAVLEMNKKQIDDQFLIVNQHISKKDNE-PTQGS 348
Query: 298 FEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFS-EFGTITSCKVMRDPSGISKGS-- 354
+ + ++K N+YIK + + + +E+L++ FS + I S K+ + I
Sbjct: 349 RLNPITQNLNKTFNSNIYIKFIPNEVTEEELRKTFSMKDANIVSIKLTKFVKKIEDQEVQ 408
Query: 355 ----GFVAFSTPEEASRALAEMNGKMIV-SKPLYVAV 386
++ + T A +A+ + + +KPL V +
Sbjct: 409 PYQFAYILYDTVLGAQKAIQTFDQSTVFGNKPLLVEL 445
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Query: 493 PMPITALSTALANASPEQQRTLLGESLYPLVEQ-LERDAAAKVTGMLLEMDQTEVLHLLE 551
P+P L A +++ +G S+YP +EQ A K+TGML++ + + LL
Sbjct: 601 PLPEVDLVQFQAVVDIGEKKQFVGNSVYPTIEQAFGPQFAGKITGMLIDENAVDFNLLLT 660
Query: 552 SPEALKAKVAEAMEVLRSVAQQQ 574
+ + K +EAM +L QQ
Sbjct: 661 NQQYFTTKASEAMSLLSQAQMQQ 683
>gi|262192741|gb|ACY30440.1| poly(A)-binding protein [Nicotiana tabacum]
Length = 99
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 82/98 (83%), Positives = 89/98 (90%)
Query: 346 DPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
DPSG+SKGSGFVAFSTPEEASRAL+EMNGKM+VSKPLYVA+AQRKEERRARLQAQFSQMR
Sbjct: 1 DPSGVSKGSGFVAFSTPEEASRALSEMNGKMVVSKPLYVALAQRKEERRARLQAQFSQMR 60
Query: 406 PVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPP 443
P+AM SV PRMPMYPPG GLGQQ YGQ PA++PP
Sbjct: 61 PIAMASSVAPRMPMYPPGGHGLGQQIFYGQPQPAMLPP 98
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 33/58 (56%)
Query: 243 DGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQ 300
D G SK GFV F ++A++A+ +NGK + YV AQ+K ER L+ QF Q
Sbjct: 1 DPSGVSKGSGFVAFSTPEEASRALSEMNGKMVVSKPLYVALAQRKEERRARLQAQFSQ 58
Score = 45.4 bits (106), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 152 DGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNV 211
D SG SKG GFV F E A A+ ++NG ++ K ++V RK+ER ++ +F+ +
Sbjct: 1 DPSGVSKGSGFVAFSTPEEASRALSEMNGKMVVSKPLYVALAQRKEERRA-RLQAQFSQM 59
>gi|119612220|gb|EAW91814.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_a [Homo
sapiens]
Length = 287
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 84/158 (53%), Positives = 114/158 (72%), Gaps = 1/158 (0%)
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
+NGK+ + ++ YVG+AQKK ER+ ELK +FEQ ++ + ++QG+NLY+KNL D IDDE+L
Sbjct: 1 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 60
Query: 329 KELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +KPLYVA+AQ
Sbjct: 61 RKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQ 119
Query: 389 RKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSG 426
RKEER+A L Q+ Q P P P PSG
Sbjct: 120 RKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSG 157
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 82/138 (59%), Gaps = 15/138 (10%)
Query: 178 LNGMLINDKQVFVGHFLRKQERETVAIKTKFN-------------NVFVKNLDESTTDED 224
+NG +N KQ++VG +K ER+T +K KF N++VKNLD+ DE
Sbjct: 1 MNGKELNGKQIYVGRAQKKVERQT-ELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDER 59
Query: 225 LKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKA 284
L+K F +GTITSA VM +G G+SK FGFV F + ++A KAV +NG+ + YV A
Sbjct: 60 LRKEFSPFGTITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 118
Query: 285 QKKSEREQELKGQFEQAM 302
Q+K ER+ L Q+ Q M
Sbjct: 119 QRKEERQAHLTNQYMQRM 136
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKL 178
N+++KNLD ID + L FS FG I S K+ +G G+SKGFGFV F + E A A+ ++
Sbjct: 45 NLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTEM 103
Query: 179 NGMLINDKQVFVGHFLRKQERE 200
NG ++ K ++V RK+ER+
Sbjct: 104 NGRIVATKPLYVALAQRKEERQ 125
Score = 42.4 bits (98), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
+LYV +LD + D +L FS G + S +V + RS G+G+V +++P +A +A+
Sbjct: 45 NLYVKNLDDGIDDERLRKEFSPFGTITSAKVM--MEGGRSKGFGFVCFSSPEEATKAVTE 102
Query: 91 LNFTPLNNKSIRIMYSHR 108
+N + K + + + R
Sbjct: 103 MNGRIVATKPLYVALAQR 120
>gi|242077714|ref|XP_002448793.1| hypothetical protein SORBIDRAFT_06g033290 [Sorghum bicolor]
gi|241939976|gb|EES13121.1| hypothetical protein SORBIDRAFT_06g033290 [Sorghum bicolor]
Length = 1076
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 120/374 (32%), Positives = 186/374 (49%), Gaps = 23/374 (6%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
T+L+VG+L ++ +L +LF G+++ RV D T S GYG+V Y++P AA A+
Sbjct: 229 TNLFVGNLPPSLASHKLIELFLPFGRIVKSRVVDDCFTGSSKGYGFVQYSDPRYAAEAIK 288
Query: 90 VLNFTPLNNK--SIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSC 147
+N + + +R+ + S ++ +++ NL + LHD F +G + S
Sbjct: 289 HMNGRMVEGRMLEVRLAGAPSSGSTKEMDMSKLYVCNLPLLLHEDKLHDLFVPYGQVTSV 348
Query: 148 KIATD-GSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIK- 205
K+ D +G SKG+GFV++ + + A +AI +LNG LI K++ V +++
Sbjct: 349 KVMRDHATGLSKGYGFVRYSDPQHAAHAIFQLNGHLIEGKKMEVRVAAVSSSGSNTSVQA 408
Query: 206 -----------TKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD-GDGKSKCFGF 253
+NV+V+NL + L +F YG +TSA V D G SK +GF
Sbjct: 409 ISETDHQLTKEVDMSNVYVQNLPLLMNTDKLLNLFLPYGKVTSAKVAMDYTSGISKGYGF 468
Query: 254 VNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLN 313
V F + DAA AV LNG + R+ V S E A T+ + N
Sbjct: 469 VKFSDPHDAAHAVIELNGCLVEGRKILVRVRPPSSPVES-------HANNRTLKEIDMSN 521
Query: 314 LYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMN 373
LY+ N+ S++ KL ELF FG IT V+ + SKG GFV F+ A+ A+A MN
Sbjct: 522 LYVCNIPSSMNKAKLVELFLPFGRITHAMVVEQSNNSSKGYGFVKFADSHCAAEAVAMMN 581
Query: 374 GKMIVSKPLYVAVA 387
G +I + + V VA
Sbjct: 582 GALIEGETISVRVA 595
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 109/394 (27%), Positives = 182/394 (46%), Gaps = 37/394 (9%)
Query: 17 GVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYV 76
G + S + + LYV +L + + +L+DLF GQV SV+V RD +T S GYG+V
Sbjct: 306 GAPSSGSTKEMDMSKLYVCNLPLLLHEDKLHDLFVPYGQVTSVKVMRDHATGLSKGYGFV 365
Query: 77 NYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGT------------------- 117
Y++P AA A+ LN + K + + R ++ SG+
Sbjct: 366 RYSDPQHAAHAIFQLNGHLIEGKKMEV----RVAAVSSSGSNTSVQAISETDHQLTKEVD 421
Query: 118 -GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATD-GSGQSKGFGFVQFENKESAQNAI 175
N++++NL ++ L + F +G + S K+A D SG SKG+GFV+F + A +A+
Sbjct: 422 MSNVYVQNLPLLMNTDKLLNLFLPYGKVTSAKVAMDYTSGISKGYGFVKFSDPHDAAHAV 481
Query: 176 DKLNGMLINDKQVFV-----GHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFG 230
+LNG L+ +++ V + + +N++V N+ S L ++F
Sbjct: 482 IELNGCLVEGRKILVRVRPPSSPVESHANNRTLKEIDMSNLYVCNIPSSMNKAKLVELFL 541
Query: 231 EYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSER 290
+G IT A+V+ + SK +GFV F ++ AA+AV +NG + V A
Sbjct: 542 PFGRITHAMVVEQSNNSSKGYGFVKFADSHCAAEAVAMMNGALIEGETISVRVAGLSPSV 601
Query: 291 EQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGI 350
+ + + LY+ NL ++ +KL LF FG I + + S
Sbjct: 602 SSSVSQHSPHSEINASPEINNCRLYVTNLPQTMSADKLVSLFMPFGQIDRVVMYAEYS-- 659
Query: 351 SKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYV 384
FV ++ A++AL M+G +I K L V
Sbjct: 660 -----FVLYADINSAAKALKHMDGYLIEGKRLVV 688
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 143/284 (50%), Gaps = 5/284 (1%)
Query: 106 SHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQ 164
+H + +++ N+F+ NL S+ L + F FG I+ ++ D +G SKG+GFVQ
Sbjct: 217 AHDEGKLKEGNGTNLFVGNLPPSLASHKLIELFLPFGRIVKSRVVDDCFTGSSKGYGFVQ 276
Query: 165 FENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDED 224
+ + A AI +NG ++ + + V L + + ++V NL ++
Sbjct: 277 YSDPRYAAEAIKHMNGRMVEGRMLEVR--LAGAPSSGSTKEMDMSKLYVCNLPLLLHEDK 334
Query: 225 LKKIFGEYGTITSAVVMRD-GDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGK 283
L +F YG +TS VMRD G SK +GFV + + AA A+ LNG + ++ V
Sbjct: 335 LHDLFVPYGQVTSVKVMRDHATGLSKGYGFVRYSDPQHAAHAIFQLNGHLIEGKKMEVRV 394
Query: 284 AQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKV 343
A S + + + N+Y++NL ++ +KL LF +G +TS KV
Sbjct: 395 AAVSSSGSNTSVQAISETDHQLTKEVDMSNVYVQNLPLLMNTDKLLNLFLPYGKVTSAKV 454
Query: 344 MRD-PSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 386
D SGISKG GFV FS P +A+ A+ E+NG ++ + + V V
Sbjct: 455 AMDYTSGISKGYGFVKFSDPHDAAHAVIELNGCLVEGRKILVRV 498
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 101/419 (24%), Positives = 171/419 (40%), Gaps = 51/419 (12%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
++LYV ++ ++ ++L +LF G++ V S S GYG+V +A+ AA A+
Sbjct: 520 SNLYVCNIPSSMNKAKLVELFLPFGRITHAMVVEQ-SNNSSKGYGFVKFADSHCAAEAVA 578
Query: 90 VLNFTPLNNKSIRIMYS-------------------HRDPSIRKSGTGNIFIKNLDKSID 130
++N + ++I + + + P I +++ NL +++
Sbjct: 579 MMNGALIEGETISVRVAGLSPSVSSSVSQHSPHSEINASPEINNC---RLYVTNLPQTMS 635
Query: 131 HKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFV 190
L F FG I + + + FV + + SA A+ ++G LI K++ V
Sbjct: 636 ADKLVSLFMPFGQIDRVVMYAE-------YSFVLYADINSAAKALKHMDGYLIEGKRLVV 688
Query: 191 ----------GHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVV 240
Q + + N++V + + T E L +IF YG I A
Sbjct: 689 KGSEPLPANAAQSACSQSGSKLVKEIDMANLYVGRVPSAVTCEQLVQIFCLYGEIVQAKK 748
Query: 241 MRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQ 300
G +G + + NA AA A++ L+G + V A +E + + Q
Sbjct: 749 FDAG------YGMIRYANASSAAAAIDHLDGYQIGGSTLVVRVAGLPAESDVATFARTPQ 802
Query: 301 AMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP-SGISKGSGFVAF 359
+ NLY+ L + +KL ELF G IT KV+ D +G+SKG GFV F
Sbjct: 803 TPGNEHRQIDMTNLYVGYLPPYVTTDKLIELFLPCGQITQAKVVVDKFTGVSKGFGFVRF 862
Query: 360 STPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQ----FSQMRPVAMGPSVP 414
+ A+ A+ MNG + L V A + A A F+ P M +P
Sbjct: 863 ADAYSAATAITHMNGYPLDGHMLAVRTAGVQPSDMASYMAHFYSYFTSTDPSRMAVGIP 921
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 62/114 (54%), Gaps = 9/114 (7%)
Query: 275 DDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSE 334
DD++ ++ K Q+ S +G+ ++ G NL++ NL S+ KL ELF
Sbjct: 200 DDQDKHLCKRQELSFSSAHDEGKLKEG--------NGTNLFVGNLPPSLASHKLIELFLP 251
Query: 335 FGTITSCKVMRDP-SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 387
FG I +V+ D +G SKG GFV +S P A+ A+ MNG+M+ + L V +A
Sbjct: 252 FGRIVKSRVVDDCFTGSSKGYGFVQYSDPRYAAEAIKHMNGRMVEGRMLEVRLA 305
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%)
Query: 21 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYAN 80
G Q T+LYVG L VT +L +LF GQ+ +V D T S G+G+V +A+
Sbjct: 805 GNEHRQIDMTNLYVGYLPPYVTTDKLIELFLPCGQITQAKVVVDKFTGVSKGFGFVRFAD 864
Query: 81 PADAARALDVLNFTPLNNKSIRIMYSHRDPS 111
AA A+ +N PL+ + + + PS
Sbjct: 865 AYSAATAITHMNGYPLDGHMLAVRTAGVQPS 895
>gi|2213871|gb|AAB61594.1| poly(A)-binding protein, partial [Mesembryanthemum crystallinum]
Length = 176
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/151 (66%), Positives = 116/151 (76%), Gaps = 11/151 (7%)
Query: 448 RGHAYRYPLGRNMQDFPFDMGAGSMLP-VPVDMGAGIPRRDASVGQPMPITALSTALANA 506
RG YRYP R + D P G +LP V DMG G+P RD S +P+ L+T LANA
Sbjct: 29 RGR-YRYPPARGLPDAPLPGVTGGVLPGVQYDMG-GMPIRDLSPT--VPVGTLATLLANA 84
Query: 507 SPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEV 566
+PEQQR LLGE+LYPLVEQLE + AAKVTGMLLEMDQTEVLHLLESPEALK+KVAEAMEV
Sbjct: 85 TPEQQRLLLGENLYPLVEQLEPEMAAKVTGMLLEMDQTEVLHLLESPEALKSKVAEAMEV 144
Query: 567 LRSVAQQQ------ANNPADQLASLSLNENL 591
LR+VAQQQ ++NPADQLA+LSLN+NL
Sbjct: 145 LRNVAQQQQQQQQPSSNPADQLAALSLNDNL 175
>gi|74762343|sp|Q6NV95.1|PAB1L_HUMAN RecName: Full=Putative protein PABPC1-like; AltName:
Full=Polyadenylate-binding protein pseudogene 2
gi|158258146|dbj|BAF85046.1| unnamed protein product [Homo sapiens]
Length = 269
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 102/250 (40%), Positives = 148/250 (59%), Gaps = 27/250 (10%)
Query: 178 LNGMLINDKQVFVGHFLRKQERET-VAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTIT 236
++GML+N VFVG F +E+E + + K + V G +
Sbjct: 1 MDGMLLNGLNVFVGRFRSPKEQEAELGARAKESKV---------------------GPAS 39
Query: 237 SAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKG 296
S V+ D GKSK FGFV+FE +D A++ +NGK+F + Y+ A KK E + ELK
Sbjct: 40 SVKVITDEGGKSKGFGFVSFERHEDPQTAMD-VNGKEFSGNQTYICLAPKKVEEQTELKC 98
Query: 297 QFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGF 356
+FEQ ++ + ++QG N+ +KNL +SIDDE+L++ FS FG I S VM + G SK GF
Sbjct: 99 KFEQMKQDRITRYQGANVCVKNLDESIDDERLQKEFSPFGIINSANVMME-GGCSKRFGF 157
Query: 357 VAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVP-P 415
V FS+PEE ++A+ MNGK++ SKPL+VA+AQ KE+R A Q+ M+ +A +VP P
Sbjct: 158 VCFSSPEEVAKAVTAMNGKIVASKPLHVALAQCKEQRLAHFTNQY--MQKMASVRAVPHP 215
Query: 416 RMPMYPPGPS 425
+ Y P PS
Sbjct: 216 VINPYQPAPS 225
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/177 (41%), Positives = 95/177 (53%), Gaps = 16/177 (9%)
Query: 139 SSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQE 198
S G S K+ TD G+SKGFGFV FE E Q A+D +NG + Q ++ +K E
Sbjct: 33 SKVGPASSVKVITDEGGKSKGFGFVSFERHEDPQTAMD-VNGKEFSGNQTYICLAPKKVE 91
Query: 199 RETVAIKTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGD 245
+T +K KF NV VKNLDES DE L+K F +G I SA VM +G
Sbjct: 92 EQT-ELKCKFEQMKQDRITRYQGANVCVKNLDESIDDERLQKEFSPFGIINSANVMMEG- 149
Query: 246 GKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAM 302
G SK FGFV F + ++ AKAV A+NGK + +V AQ K +R Q+ Q M
Sbjct: 150 GCSKRFGFVCFSSPEEVAKAVTAMNGKIVASKPLHVALAQCKEQRLAHFTNQYMQKM 206
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 78/165 (47%), Gaps = 19/165 (11%)
Query: 51 SQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV--------LNFTPLNNKSI- 101
S+VG SV+V D +S G+G+V++ D A+DV + L K +
Sbjct: 33 SKVGPASSVKVITD-EGGKSKGFGFVSFERHEDPQTAMDVNGKEFSGNQTYICLAPKKVE 91
Query: 102 -------RIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGS 154
+ +D R G N+ +KNLD+SID + L FS FG I S + +G
Sbjct: 92 EQTELKCKFEQMKQDRITRYQG-ANVCVKNLDESIDDERLQKEFSPFGIINSANVMMEG- 149
Query: 155 GQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER 199
G SK FGFV F + E A+ +NG ++ K + V K++R
Sbjct: 150 GCSKRFGFVCFSSPEEVAKAVTAMNGKIVASKPLHVALAQCKEQR 194
>gi|302408078|ref|XP_003001874.1| polyadenylate-binding protein [Verticillium albo-atrum VaMs.102]
gi|261359595|gb|EEY22023.1| polyadenylate-binding protein [Verticillium albo-atrum VaMs.102]
Length = 555
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 120/211 (56%), Gaps = 39/211 (18%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ SLYVG+L+ VT++ L++LFS +G V S+RVCRD TRRSLGY YVNY +D +AL
Sbjct: 60 SASLYVGELEPQVTEAMLFELFSHIGPVASIRVCRDAVTRRSLGYAYVNYNTTSDGEKAL 119
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ LN+T +N + RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDT S + K
Sbjct: 120 EELNYTVINGRPCRIMWSQRDPALRKNGQGNVFIKNLDVAIDNKALHDTISEGEDEDKVK 179
Query: 149 IA----------------------TDGS-----------------GQSKGFGFVQFENKE 169
TD G+SKGFGFV F N E
Sbjct: 180 EEPKEGAEEETPAPEAEVKKEDSETDAESQEAADKKDAKKGDKKLGKSKGFGFVCFSNPE 239
Query: 170 SAQNAIDKLNGMLINDKQVFVGHFLRKQERE 200
A A+ +N +I++K ++V RK R+
Sbjct: 240 DATKAVADMNQRMIDNKPLYVALAQRKDVRK 270
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 108/239 (45%), Gaps = 59/239 (24%)
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENADDAAKAVEA 268
+++V L+ T+ L ++F G + S V RD +S + +VN+ D KA+E
Sbjct: 62 SLYVGELEPQVTEAMLFELFSHIGPVASIRVCRDAVTRRSLGYAYVNYNTTSDGEKALEE 121
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
LN + R + +Q+ + +G N++IKNL +ID++ L
Sbjct: 122 LNYTVINGRPCRIMWSQRDPALRKNGQG----------------NVFIKNLDVAIDNKAL 165
Query: 329 KELFSEFGTITSCK-----------------VMRDPS----------------------G 349
+ SE K V ++ S G
Sbjct: 166 HDTISEGEDEDKVKEEPKEGAEEETPAPEAEVKKEDSETDAESQEAADKKDAKKGDKKLG 225
Query: 350 ISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQF---SQMR 405
SKG GFV FS PE+A++A+A+MN +MI +KPLYVA+AQRK+ R+ +L+ +QMR
Sbjct: 226 KSKGFGFVCFSNPEDATKAVADMNQRMIDNKPLYVALAQRKDVRKNQLEQSIQARNQMR 284
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 95/227 (41%), Gaps = 48/227 (21%)
Query: 117 TGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAI 175
+ ++++ L+ + L + FS G + S ++ D + +S G+ +V + + A+
Sbjct: 60 SASLYVGELEPQVTEAMLFELFSHIGPVASIRVCRDAVTRRSLGYAYVNYNTTSDGEKAL 119
Query: 176 DKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGE---- 231
++LN +IN + + +R+ K NVF+KNLD + ++ L E
Sbjct: 120 EELNYTVINGRPCRI----MWSQRDPALRKNGQGNVFIKNLDVAIDNKALHDTISEGEDE 175
Query: 232 --------------YGTITSAVVMRDGD---------------------GKSKCFGFVNF 256
+ V D + GKSK FGFV F
Sbjct: 176 DKVKEEPKEGAEEETPAPEAEVKKEDSETDAESQEAADKKDAKKGDKKLGKSKGFGFVCF 235
Query: 257 ENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMK 303
N +DA KAV +N + D++ YV AQ+K R K Q EQ+++
Sbjct: 236 SNPEDATKAVADMNQRMIDNKPLYVALAQRKDVR----KNQLEQSIQ 278
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 493 PMPITALSTALANAS-PEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLE 551
P ++A+ L NA+ QQ+ ++GE ++P + + + A K+TGMLLEM+ +E++ L+E
Sbjct: 459 PQGLSAIQLQLNNATDARQQKQIIGELIFPKIAAQQPELAGKITGMLLEMENSELITLIE 518
Query: 552 SPEALKAKVAEAMEVLRSVAQQQA 575
A+K KV EA+ V + Q
Sbjct: 519 DDNAMKLKVDEALGVYEEYVKNQG 542
>gi|110002613|gb|AAI18569.1| PABPC4 protein [Homo sapiens]
Length = 252
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 80/135 (59%), Positives = 107/135 (79%), Gaps = 1/135 (0%)
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
+NGK+ + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL D+IDDEKL
Sbjct: 1 MNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKL 60
Query: 329 KELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ SKPLYVA+AQ
Sbjct: 61 RKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 119
Query: 389 RKEERRARLQAQFSQ 403
RKEER+A L Q+ Q
Sbjct: 120 RKEERKAHLTNQYMQ 134
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 80/136 (58%), Gaps = 15/136 (11%)
Query: 178 LNGMLINDKQVFVGHFLRKQERETVAIKTKFN-------------NVFVKNLDESTTDED 224
+NG I+ K +FVG +K ER+ +K KF N+++KNLD++ DE
Sbjct: 1 MNGKEISGKIIFVGRAQKKVERQ-AELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 59
Query: 225 LKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKA 284
L+K F +G+ITSA VM + DG+SK FGFV F + ++A KAV +NG+ + YV A
Sbjct: 60 LRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 118
Query: 285 QKKSEREQELKGQFEQ 300
Q+K ER+ L Q+ Q
Sbjct: 119 QRKEERKAHLTNQYMQ 134
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKL 178
N++IKNLD +ID + L FS FG+I S K+ + G+SKGFGFV F + E A A+ ++
Sbjct: 45 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEM 103
Query: 179 NGMLINDKQVFVGHFLRKQERE 200
NG ++ K ++V RK+ER+
Sbjct: 104 NGRIVGSKPLYVALAQRKEERK 125
Score = 46.6 bits (109), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
+++ +LY+ +LD + D +L FS G + S +V L RS G+G+V +++P +A
Sbjct: 39 SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVM--LEDGRSKGFGFVCFSSPEEA 96
Query: 85 ARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNL 125
+A+ +N + +K + + + R RK+ N +++ +
Sbjct: 97 TKAVTEMNGRIVGSKPLYVALAQRKEE-RKAHLTNQYMQRV 136
>gi|78070599|gb|AAI06909.1| PABPC4 protein [Homo sapiens]
Length = 281
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 80/135 (59%), Positives = 107/135 (79%), Gaps = 1/135 (0%)
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
+NGK+ + +VG+AQKK ER+ ELK +FEQ +E + ++QG+NLYIKNL D+IDDEKL
Sbjct: 1 MNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKL 60
Query: 329 KELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
++ FS FG+ITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ SKPLYVA+AQ
Sbjct: 61 RKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 119
Query: 389 RKEERRARLQAQFSQ 403
RKEER+A L Q+ Q
Sbjct: 120 RKEERKAHLTNQYMQ 134
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 80/136 (58%), Gaps = 15/136 (11%)
Query: 178 LNGMLINDKQVFVGHFLRKQERETVAIKTKFN-------------NVFVKNLDESTTDED 224
+NG I+ K +FVG +K ER+ +K KF N+++KNLD++ DE
Sbjct: 1 MNGKEISGKIIFVGRAQKKVERQ-AELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 59
Query: 225 LKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKA 284
L+K F +G+ITSA VM + DG+SK FGFV F + ++A KAV +NG+ + YV A
Sbjct: 60 LRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 118
Query: 285 QKKSEREQELKGQFEQ 300
Q+K ER+ L Q+ Q
Sbjct: 119 QRKEERKAHLTNQYMQ 134
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKL 178
N++IKNLD +ID + L FS FG+I S K+ + G+SKGFGFV F + E A A+ ++
Sbjct: 45 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEM 103
Query: 179 NGMLINDKQVFVGHFLRKQERE 200
NG ++ K ++V RK+ER+
Sbjct: 104 NGRIVGSKPLYVALAQRKEERK 125
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
+++ +LY+ +LD + D +L FS G + S +V L RS G+G+V +++P +A
Sbjct: 39 SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVM--LEDGRSKGFGFVCFSSPEEA 96
Query: 85 ARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNL 125
+A+ +N + +K + + + R RK+ N +++ +
Sbjct: 97 TKAVTEMNGRIVGSKPLYVALAQRKEE-RKAHLTNQYMQRV 136
>gi|303391122|ref|XP_003073791.1| polyadenylate-binding protein 2 [Encephalitozoon intestinalis ATCC
50506]
gi|303302939|gb|ADM12431.1| polyadenylate-binding protein 2 [Encephalitozoon intestinalis ATCC
50506]
Length = 410
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 118/328 (35%), Positives = 176/328 (53%), Gaps = 25/328 (7%)
Query: 117 TGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAI- 175
TGNIF+KNL ++ K L D FS FG I SCK+AT G+SKG+GFVQF+ K++A+ I
Sbjct: 10 TGNIFVKNLPENFTSKDLDDAFSMFGEITSCKVATTSHGKSKGYGFVQFKEKKAAKKVIK 69
Query: 176 --DKLNGMLINDKQVFVGHFLRKQER-ETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEY 232
+ LNG+++ + ++ V + + ++ E T F N F+KN +E+L+++ +Y
Sbjct: 70 NFNNLNGLMLGENKIVVELYNPEMKKGENKKTPTMFTNCFIKNFPVDVEEENLRELLEKY 129
Query: 233 GTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGK-KFDDRE----WYVGKAQKK 287
G +TS DGK K F F NFE+ + A A++ L+ F D E +Y+ K Q+K
Sbjct: 130 GKVTSLFFPTKEDGKPKGFAFANFESHECALNAIKNLHETFPFGDGESGEPFYIQKGQRK 189
Query: 288 SEREQELKGQFEQ-AMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRD 346
ER +EL+ FEQ +M+ K NLYI N+ + E+L +F EFG ITS V D
Sbjct: 190 EERAEELRKTFEQLSMQGQSYK---KNLYITNIPEGFGAEELNNIFREFGNITSMSVGTD 246
Query: 347 PSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRP 406
+ K +V +STPEEAS A+ N + L VA + K ER +
Sbjct: 247 GANSQKQYAYVCYSTPEEASIAVERGNEIYLDGNRLQVAYFKNKLERMKE-----KEFGS 301
Query: 407 VAMGPSVPPRMPMYPPG----PSGLGQQ 430
+ P++P MY G P+G ++
Sbjct: 302 IGYKPNIP---YMYNQGVNFVPNGFKRE 326
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 128/290 (44%), Gaps = 28/290 (9%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
T +++V +L N T L D FS G++ S +V S +S GYG+V + A + +
Sbjct: 10 TGNIFVKNLPENFTSKDLDDAFSMFGEITSCKVA-TTSHGKSKGYGFVQFKEKKAAKKVI 68
Query: 89 DVLNFTPLNNKSI---RIMYSHRDPSIRKSGT-------GNIFIKNLDKSIDHKALHDTF 138
NF LN + +I+ +P ++K N FIKN ++ + L +
Sbjct: 69 K--NFNNLNGLMLGENKIVVELYNPEMKKGENKKTPTMFTNCFIKNFPVDVEEENLRELL 126
Query: 139 SSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGML-INDKQ----VFVGHF 193
+G + S T G+ KGF F FE+ E A NAI L+ D + ++
Sbjct: 127 EKYGKVTSLFFPTKEDGKPKGFAFANFESHECALNAIKNLHETFPFGDGESGEPFYIQKG 186
Query: 194 LRKQERETVAIKT----------KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD 243
RK+ER KT N+++ N+ E E+L IF E+G ITS V D
Sbjct: 187 QRKEERAEELRKTFEQLSMQGQSYKKNLYITNIPEGFGAEELNNIFREFGNITSMSVGTD 246
Query: 244 GDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQE 293
G K + +V + ++A+ AVE N D V + K ER +E
Sbjct: 247 GANSQKQYAYVCYSTPEEASIAVERGNEIYLDGNRLQVAYFKNKLERMKE 296
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 101/224 (45%), Gaps = 34/224 (15%)
Query: 194 LRKQER--ETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCF 251
+RK ER ET N+FVKNL E+ T +DL F +G ITS V GKSK +
Sbjct: 1 MRKDERPPET-------GNIFVKNLPENFTSKDLDDAFSMFGEITSCKVATTSHGKSKGY 53
Query: 252 GFVNFENADDAAKAVEA---LNGKKFDDREWYV---GKAQKKSEREQELKGQFEQAMKET 305
GFV F+ A K ++ LNG + + V KK E K+T
Sbjct: 54 GFVQFKEKKAAKKVIKNFNNLNGLMLGENKIVVELYNPEMKKGEN------------KKT 101
Query: 306 VDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEA 365
F N +IKN +++E L+EL ++G +TS G KG F F + E A
Sbjct: 102 PTMF--TNCFIKNFPVDVEEENLRELLEKYGKVTSLFFPTKEDGKPKGFAFANFESHECA 159
Query: 366 SRALAEMN-----GKMIVSKPLYVAVAQRKEERRARLQAQFSQM 404
A+ ++ G +P Y+ QRKEER L+ F Q+
Sbjct: 160 LNAIKNLHETFPFGDGESGEPFYIQKGQRKEERAEELRKTFEQL 203
>gi|320168681|gb|EFW45580.1| polyadenylate-binding protein [Capsaspora owczarzaki ATCC 30864]
Length = 814
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 121/377 (32%), Positives = 193/377 (51%), Gaps = 35/377 (9%)
Query: 32 LYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVL 91
L V +LD + D QL D+F + G ++ +C+ S S+G G V Y + DA A+ +
Sbjct: 81 LVVKNLDPRMDDQQLRDIFGEFG---TMTLCKVAS---SIGVGLVTYESFDDAHAAMTQV 134
Query: 92 NFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIAT 151
N LN + +++ HR P R S + ++NL ++L FG + I
Sbjct: 135 NGMYLNGQQVQV---HRLPE-RPS----LIVRNLPADASEESLAALCRPFGRVGVATIVQ 186
Query: 152 DGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET-VAIKTKFN- 209
+ + G V + E A AI L+G + Q+ V + ERE A+ +
Sbjct: 187 EAP-EDAPMGVVCLDRFEDALTAIRALHGSKLGSNQLSVTFPATRAERECESAVAQRLER 245
Query: 210 ---NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
+ +KN+D D+ L+++F +GTI S +MRD GKSK +GFV + + A+KA+
Sbjct: 246 LQGKLVIKNMDVDMDDDQLEELFAPFGTIISLHIMRDETGKSKGYGFVAYSTTEAASKAM 305
Query: 267 EALNGKKFD------DREWYVGKAQK---KSEREQELKGQFEQAMKETVDKFQGLNLYIK 317
A +G+ FD D + K+ R E++ E A + +F+ NL I+
Sbjct: 306 AATHGQTFDRLTRPLDVTIFTSSEHDGMFKANRVAEVRHHAEVAR---IAQFRK-NLCIR 361
Query: 318 NLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMI 377
NLG+SID+++L+ LF+ FG I +C V+RD G S+ GFV F+T EEAS+A+AEM+GK
Sbjct: 362 NLGESIDEKQLRALFAPFGKIRTCHVLRDDMGRSRKVGFVDFATMEEASKAVAEMHGKPS 421
Query: 378 --VSKPLYVAVAQRKEE 392
P+ V ++ R +
Sbjct: 422 PGTQMPMTVTLSHRARD 438
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 94/281 (33%), Positives = 151/281 (53%), Gaps = 27/281 (9%)
Query: 114 KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQN 173
K G + +KNLD +D + L D F FG + CK+A+ S G G V +E+ + A
Sbjct: 75 KVGAIKLVVKNLDPRMDDQQLRDIFGEFGTMTLCKVAS-----SIGVGLVTYESFDDAHA 129
Query: 174 AIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYG 233
A+ ++NGM +N +QV V R ER + + V+NL ++E L + +G
Sbjct: 130 AMTQVNGMYLNGQQVQVH---RLPERPS---------LIVRNLPADASEESLAALCRPFG 177
Query: 234 TITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQE 293
+ A ++++ + G V + +DA A+ AL+G K + V ++ERE
Sbjct: 178 RVGVATIVQEAPEDAP-MGVVCLDRFEDALTAIRALHGSKLGSNQLSVTFPATRAERE-- 234
Query: 294 LKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKG 353
E A+ + +++ QG L IKN+ +DD++L+ELF+ FGTI S +MRD +G SKG
Sbjct: 235 ----CESAVAQRLERLQG-KLVIKNMDVDMDDDQLEELFAPFGTIISLHIMRDETGKSKG 289
Query: 354 SGFVAFSTPEEASRALAEMNGKMI--VSKPLYVAVAQRKEE 392
GFVA+ST E AS+A+A +G+ +++PL V + E
Sbjct: 290 YGFVAYSTTEAASKAMAATHGQTFDRLTRPLDVTIFTSSEH 330
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 124/433 (28%), Positives = 204/433 (47%), Gaps = 75/433 (17%)
Query: 28 LTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARA 87
L L + ++D ++ D QL +LF+ G ++S+ + RD T +S GYG+V Y+ A++A
Sbjct: 246 LQGKLVIKNMDVDMDDDQLEELFAPFGTIISLHIMRD-ETGKSKGYGFVAYSTTEAASKA 304
Query: 88 ---------------LDVLNFTPLNN----KSIRI--MYSHRDPSIRKSGTGNIFIKNLD 126
LDV FT + K+ R+ + H + + N+ I+NL
Sbjct: 305 MAATHGQTFDRLTRPLDVTIFTSSEHDGMFKANRVAEVRHHAEVARIAQFRKNLCIRNLG 364
Query: 127 KSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDK 186
+SID K L F+ FG I +C + D G+S+ GFV F E A A+ +++G
Sbjct: 365 ESIDEKQLRALFAPFGKIRTCHVLRDDMGRSRKVGFVDFATMEEASKAVAEMHGKPSPGT 424
Query: 187 Q----VFVGHFLR----------------KQERETVA---IKTKFNNVFVKNLDESTTDE 223
Q V + H R E E A I+ + ++VKN+D + E
Sbjct: 425 QMPMTVTLSHRARDAQDPPAPNASGKDSSTDEAEPDAEGQIRPR-KLIYVKNIDPAVELE 483
Query: 224 DLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGK 283
DL+++FG++G I S+ +MRD G SK G V++ +AD A AV A++GK+
Sbjct: 484 DLQRVFGQFGAIVSSNIMRDDAGISKGIGHVDYLHADAARAAVAAMDGKRL--------- 534
Query: 284 AQKKSEREQELKGQ-FEQAMKETVDKFQGL---NLYIKNLGDSIDDEKLKELFSEFGTIT 339
GQ ++ + D+F + +L IKNL SI+ L++LFS FG I
Sbjct: 535 ---------TATGQPLRVSLPDPRDRFSPIRYASLIIKNLEQSINLSALRDLFSPFGCIL 585
Query: 340 SCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERR---AR 396
S + + + V F + E A+A +NG ++ P+ + RK+ R A
Sbjct: 586 SSRTIE----TQPRAALVDFLSEEACQNAIANINGAIVNGLPVTASPYVRKDRRSVYVAN 641
Query: 397 LQAQFSQMRPVAM 409
L A ++ ++ +A+
Sbjct: 642 LPANYNYVKLMAL 654
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 161/347 (46%), Gaps = 30/347 (8%)
Query: 32 LYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVL 91
+YV ++D V L +F Q G ++S + RD S G G+V+Y + A A+ +
Sbjct: 471 IYVKNIDPAVELEDLQRVFGQFGAIVSSNIMRD-DAGISKGIGHVDYLHADAARAAVAAM 529
Query: 92 NFTPLNNKSIRIMYSHRDPSIRKSGT--GNIFIKNLDKSIDHKALHDTFSSFGNILSCKI 149
+ L + S DP R S ++ IKNL++SI+ AL D FS FG ILS +
Sbjct: 530 DGKRLTATGQPLRVSLPDPRDRFSPIRYASLIIKNLEQSINLSALRDLFSPFGCILSSRT 589
Query: 150 ATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFN 209
Q + V F ++E+ QNAI +NG ++N V ++RK R
Sbjct: 590 I---ETQPRA-ALVDFLSEEACQNAIANINGAIVNGLPVTASPYVRKDRR---------- 635
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEAL 269
+V+V NL + L +F + G I + +V RD GFV F+ A E
Sbjct: 636 SVYVANLPANYNYVKLMALFADCGKIVTTIVPRD----FSTVGFVCFDQPASVELA-ERF 690
Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLK 329
+G + E YV + +++ E A LY+ N+ ++K++
Sbjct: 691 HGHVLEGEELYVSRFPLQTDPAPPPHATSEVAPYHI--------LYLTNVDFEASEDKVR 742
Query: 330 ELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKM 376
EL + +GT+T+ V R G S+G FV F+ E+AS+A ++G++
Sbjct: 743 ELCAPYGTLTAVHVRRRADGTSRGFAFVHFTNVEDASKAKDALSGQI 789
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 125/246 (50%), Gaps = 20/246 (8%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SL + +L+ ++ S L DLFS G +LS R + R +L V++ + A+
Sbjct: 559 SLIIKNLEQSINLSALRDLFSPFGCILSSRTI-ETQPRAAL----VDFLSEEACQNAIAN 613
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+N +N + P +RK ++++ NL + ++ L F+ G I++ +
Sbjct: 614 INGAIVNGLPVTA-----SPYVRKDRR-SVYVANLPANYNYVKLMALFADCGKIVTTIVP 667
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK--- 207
D S GFV F+ S + A ++ +G ++ ++++V F + + T
Sbjct: 668 RDFST----VGFVCFDQPASVELA-ERFHGHVLEGEELYVSRFPLQTDPAPPPHATSEVA 722
Query: 208 -FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
++ +++ N+D +++ ++++ YGT+T+ V R DG S+ F FV+F N +DA+KA
Sbjct: 723 PYHILYLTNVDFEASEDKVRELCAPYGTLTAVHVRRRADGTSRGFAFVHFTNVEDASKAK 782
Query: 267 EALNGK 272
+AL+G+
Sbjct: 783 DALSGQ 788
>gi|62321231|dbj|BAD94406.1| putative poly(A) binding protein [Arabidopsis thaliana]
Length = 154
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 93/158 (58%), Positives = 111/158 (70%), Gaps = 18/158 (11%)
Query: 443 PQMPPRGHAYRYPLG-RNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALST 501
PQM PRG YRYP G RNM D P G M+PV DM QPM L+T
Sbjct: 6 PQMMPRGRGYRYPSGGRNMPDGPM---PGGMVPVAYDMNV------MPYSQPMSAGQLAT 56
Query: 502 ALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVA 561
+LANA+P QQRTLLGESLYPLV+Q+E + AAKVTGMLLEMDQTEVLHLLESPEAL AKV+
Sbjct: 57 SLANATPAQQRTLLGESLYPLVDQIESEHAAKVTGMLLEMDQTEVLHLLESPEALNAKVS 116
Query: 562 EAMEVLRSVAQ--------QQANNPADQLASLSLNENL 591
EA++VLR+V Q ++ +P+D LASLS+N++L
Sbjct: 117 EALDVLRNVNQPSSQGSEGNKSGSPSDLLASLSINDHL 154
>gi|358058232|dbj|GAA95909.1| hypothetical protein E5Q_02567 [Mixia osmundae IAM 14324]
Length = 614
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 152/288 (52%), Gaps = 19/288 (6%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ +LD ++ + L+D F+ G +LS +V D S GYG+V+Y A A+
Sbjct: 68 NIFIKNLDESIDNKALHDTFAAFGNILSCKVALD-ENGLSKGYGFVHYEGGEAAEAAIQA 126
Query: 91 LNFTPLNNKSIRIMYS----HRDPSIR--KSGTGNIFIKNLDKSIDHKALHDTFSSFGNI 144
+N LN+K + + + R I +S N+++K L I + F+ +G +
Sbjct: 127 VNGMLLNDKVVYVGHHVPRRERQAKIDEVRSNYTNLYVKGLAPEISEAEFSELFAKYGQV 186
Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET--- 201
S + D G+SKGFGFV F + E+A A+ +L+ + ++V +K ERE
Sbjct: 187 TSAVLQVDQDGKSKGFGFVNFADHEAAAKALTELHDSEHKGQTLYVSRAQKKGEREEELK 246
Query: 202 ---------VAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFG 252
++K + N++VKNL++ +E + F +GTITS +MRD G SK FG
Sbjct: 247 KSYEQQKYDKSLKYQGVNLYVKNLEDDMDEEKVTAEFAAFGTITSTKIMRDEKGASKGFG 306
Query: 253 FVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQ 300
FV F + D+A KAV LNGK F + YV AQ+K R+Q+L+ Q Q
Sbjct: 307 FVCFSSPDEATKAVTELNGKMFGQKPLYVSLAQRKDVRKQQLEAQLAQ 354
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 101/188 (53%), Gaps = 19/188 (10%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
T+LYV L +++++ +LF++ GQV S + D +S G+G+VN+A+ AA+AL
Sbjct: 160 TNLYVKGLAPEISEAEFSELFAKYGQVTSAVLQVD-QDGKSKGFGFVNFADHEAAAKALT 218
Query: 90 VLNFTPLNNKSIRIMYSHR-----------------DPSIRKSGTGNIFIKNLDKSIDHK 132
L+ + +++ + + + D S++ G N+++KNL+ +D +
Sbjct: 219 ELHDSEHKGQTLYVSRAQKKGEREEELKKSYEQQKYDKSLKYQGV-NLYVKNLEDDMDEE 277
Query: 133 ALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGH 192
+ F++FG I S KI D G SKGFGFV F + + A A+ +LNG + K ++V
Sbjct: 278 KVTAEFAAFGTITSTKIMRDEKGASKGFGFVCFSSPDEATKAVTELNGKMFGQKPLYVSL 337
Query: 193 FLRKQERE 200
RK R+
Sbjct: 338 AQRKDVRK 345
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 45/65 (69%)
Query: 510 QQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRS 569
+Q+ ++GE LYPL+ + + A K+TGMLLEMD E+L L++S EAL K+AEA+ VL
Sbjct: 532 EQKQIIGEMLYPLILETRPEQAGKITGMLLEMDAGELLMLIDSREALDVKIAEALAVLEQ 591
Query: 570 VAQQQ 574
QQ
Sbjct: 592 YQAQQ 596
>gi|269859758|ref|XP_002649603.1| poly(A)-binding protein [Enterocytozoon bieneusi H348]
gi|220066966|gb|EED44435.1| poly(A)-binding protein [Enterocytozoon bieneusi H348]
Length = 484
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 114/380 (30%), Positives = 193/380 (50%), Gaps = 32/380 (8%)
Query: 32 LYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVL 91
++VGD+ N T ++L ++F + V ++ + + L+ + + +V + + A A+
Sbjct: 23 IHVGDISLNTTANELKEVFKGLN-VTNIIMKKTLNGQ--YAFAFVKFDSANAAQEAVQKY 79
Query: 92 NFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIAT 151
N+T LN K I + S D + S + NIF+ N+ + K L + F +FG +LSCKI+
Sbjct: 80 NYTMLNGKEILLTIS--DTQFKYSQSANIFVNNIPTDMSAKDLEEIFKNFGPVLSCKISR 137
Query: 152 DGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNV 211
G+SKG+G+V ++N +SA+ A+ + IN+ +FV F Q+ + F N
Sbjct: 138 TSEGKSKGYGYVMYKNLKSAKKAVTNCQNVKINENILFVD-FYNPQKSARNSENKAFTNC 196
Query: 212 FVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNG 271
F KN + T+ +LK + +YG IT+ DGK F VN+ + + A +A++ L+
Sbjct: 197 FCKNFPPNYTEAELKNLLKKYGEITTIYFPTKSDGKPVGFACVNYAHPESAVRAIDELHN 256
Query: 272 K------------KFDDREWYVGKAQKKSEREQELKG------QFEQAMKETVDKFQGLN 313
K KF +Y+ K +KK EREQ LK F +K N
Sbjct: 257 KQIFNNNQMQKDTKFAIEPFYIQKNEKKKEREQILKSFYGNSVGFRNKLKR--------N 308
Query: 314 LYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMN 373
L+I+N+ S +++L E+ +FG IT K+ D K G+V +ST EEA+ AL +
Sbjct: 309 LFIQNVPTSFSEDELLEILKKFGNITDFKLKLDTLHPEKQFGYVCYSTIEEAAVALEKSK 368
Query: 374 GKMIVSKPLYVAVAQRKEER 393
++ L +++ + K ER
Sbjct: 369 QVLLDGNQLELSIYKSKYER 388
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 88/198 (44%), Gaps = 27/198 (13%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
T+ + + N T+++L +L + G++ ++ S + +G+ VNYA+P A RA+D
Sbjct: 194 TNCFCKNFPPNYTEAELKNLLKKYGEITTIYFPTK-SDGKPVGFACVNYAHPESAVRAID 252
Query: 90 VL-NFTPLNNK--------SIRIMYSHRDPS------IRKSGTGN-----------IFIK 123
L N NN +I Y ++ I KS GN +FI+
Sbjct: 253 ELHNKQIFNNNQMQKDTKFAIEPFYIQKNEKKKEREQILKSFYGNSVGFRNKLKRNLFIQ 312
Query: 124 NLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLI 183
N+ S L + FGNI K+ D K FG+V + E A A++K +L+
Sbjct: 313 NVPTSFSEDELLEILKKFGNITDFKLKLDTLHPEKQFGYVCYSTIEEAAVALEKSKQVLL 372
Query: 184 NDKQVFVGHFLRKQERET 201
+ Q+ + + K ER T
Sbjct: 373 DGNQLELSIYKSKYERST 390
>gi|14571650|emb|CAC42811.1| Poly(A)-binding protein cytoplasmic 5 [Cricetulus griseus]
Length = 177
Score = 160 bits (406), Expect = 1e-36, Method: Composition-based stats.
Identities = 79/157 (50%), Positives = 106/157 (67%), Gaps = 1/157 (0%)
Query: 34 VGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNF 93
VGDL VT+ LY F G + R+CRD T LGYGYVN+ PADA AL+ +NF
Sbjct: 22 VGDLGPEVTEDMLYKKFRPAGPLRFTRICRDPVTHSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 94 TPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG 153
+N K R+M+S D +RKSG GNIFIK+LDKSID++ L FS+FGNILSCK+ D
Sbjct: 82 DLINGKPFRLMWSQPDDRLRKSGVGNIFIKHLDKSIDNRTLFYLFSAFGNILSCKVVCDD 141
Query: 154 SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFV 190
+G SKG+ +V F++ +A AI +NG+ +N++QV+V
Sbjct: 142 NG-SKGYAYVHFDSLAAANRAIWHMNGVWLNNRQVYV 177
Score = 68.2 bits (165), Expect = 1e-08, Method: Composition-based stats.
Identities = 53/173 (30%), Positives = 82/173 (47%), Gaps = 18/173 (10%)
Query: 213 VKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKC-FGFVNFENADDAAKAVEALNG 271
V +L T++ L K F G + + RD S +G+VNF DA A+ +N
Sbjct: 22 VGDLGPEVTEDMLYKKFRPAGPLRFTRICRDPVTHSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 272 KKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKEL 331
+ + + + +Q + G N++IK+L SID+ L L
Sbjct: 82 DLINGKPFRLMWSQPDDRLRKSGVG----------------NIFIKHLDKSIDNRTLFYL 125
Query: 332 FSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYV 384
FS FG I SCKV+ D +G SKG +V F + A+RA+ MNG + ++ +YV
Sbjct: 126 FSAFGNILSCKVVCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVWLNNRQVYV 177
Score = 62.8 bits (151), Expect = 5e-07, Method: Composition-based stats.
Identities = 45/161 (27%), Positives = 81/161 (50%), Gaps = 6/161 (3%)
Query: 122 IKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSK-GFGFVQFENKESAQNAIDKLNG 180
+ +L + L+ F G + +I D S G+G+V F A+ A++ +N
Sbjct: 22 VGDLGPEVTEDMLYKKFRPAGPLRFTRICRDPVTHSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 181 MLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVV 240
LIN K + Q + + K+ N+F+K+LD+S + L +F +G I S V
Sbjct: 82 DLINGKPF---RLMWSQPDDRLR-KSGVGNIFIKHLDKSIDNRTLFYLFSAFGNILSCKV 137
Query: 241 MRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYV 281
+ D +G SK + +V+F++ A +A+ +NG ++R+ YV
Sbjct: 138 VCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVWLNNRQVYV 177
Score = 39.3 bits (90), Expect = 5.6, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Query: 316 IKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISK-GSGFVAFSTPEEASRALAEMNG 374
+ +LG + ++ L + F G + ++ RDP S G G+V F P +A AL MN
Sbjct: 22 VGDLGPEVTEDMLYKKFRPAGPLRFTRICRDPVTHSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 375 KMIVSKPLYVAVAQRKEERR 394
+I KP + +Q + R
Sbjct: 82 DLINGKPFRLMWSQPDDRLR 101
>gi|320581035|gb|EFW95257.1| polyadenylate-binding protein [Ogataea parapolymorpha DL-1]
Length = 541
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 112/362 (30%), Positives = 176/362 (48%), Gaps = 68/362 (18%)
Query: 103 IMYSH--RDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGF 160
I Y H + ++K GN++++ L + L FS +G ++SCKI D G SKG+
Sbjct: 78 IEYEHVATEHELKKQLPGNLYVRGLLPTTTSDDLVRIFSRYGALVSCKIIYDDFGVSKGY 137
Query: 161 GFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER--ETVAIKTKFNNVFVKNLDE 218
GF+ F ++ AQ AID LNG+ ++ +FV H + K++R E K K+ N++VKN +
Sbjct: 138 GFINFADRIEAQKAIDNLNGVNVDGNHLFVNHHISKRDRLKELEMRKLKYTNLYVKNFPD 197
Query: 219 STTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDRE 278
T E L ++FG+YG + S + + ++ + F+NF++ +DA +A E L+G F+
Sbjct: 198 DLTKEKLAQVFGQYGDVESVFLPQGTGNHNRGYAFINFKSHEDAVRAQENLDG--FEIAP 255
Query: 279 WY---VGKAQKKSEREQE-----------LKGQFEQAMKETVD----------------- 307
Y +GKA+++ +R Q + Q+ E +
Sbjct: 256 GYRLQLGKAERRKDRMQNQMNSYKPNYLPFQPQYMPPQPEHSNNLYPSFIVSPDSNLIST 315
Query: 308 ---------KFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP----------- 347
++Q NLYI +L D+ L ELF+ FG I S K+M P
Sbjct: 316 ATGLPIAGPQYQDSNLYIIHLPLEFKDQDLYELFAPFGQIMSAKIMTYPPNDSAVIDEGE 375
Query: 348 --------SGISKGSGFVAFSTPEEASRALAEMNGKMI-VSKPLYVAVAQRKEER--RAR 396
G S+G GFV F+ P +AS+AL MNG + S L V+ AQRKE + + R
Sbjct: 376 EDTESKSREGRSRGFGFVCFNKPLDASKALVSMNGYRVDDSHVLEVSFAQRKENKFEKGR 435
Query: 397 LQ 398
L
Sbjct: 436 LH 437
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 146/308 (47%), Gaps = 28/308 (9%)
Query: 130 DHKALHDTFSSFGNI-----LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLIN 184
D L + + F N ++C++ G+ +S F +FE K+ + + L I
Sbjct: 21 DSAVLENLLAVFKNTYNYPEVNCEVLK-GNSESPKTVFARFEEKDHFEKFKEFLEQRDIE 79
Query: 185 DKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG 244
+ V H L+KQ N++V+ L +TT +DL +IF YG + S ++ D
Sbjct: 80 YEHVATEHELKKQLP---------GNLYVRGLLPTTTSDDLVRIFSRYGALVSCKIIYDD 130
Query: 245 DGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKE 304
G SK +GF+NF + +A KA++ LNG D +V K +R +EL+
Sbjct: 131 FGVSKGYGFINFADRIEAQKAIDNLNGVNVDGNHLFVNHHISKRDRLKELE--------- 181
Query: 305 TVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEE 364
+ K + NLY+KN D + EKL ++F ++G + S + + ++G F+ F + E+
Sbjct: 182 -MRKLKYTNLYVKNFPDDLTKEKLAQVFGQYGDVESVFLPQGTGNHNRGYAFINFKSHED 240
Query: 365 ASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGP 424
A RA ++G I P Y + E R+ R+Q Q + +P + P P MP P
Sbjct: 241 AVRAQENLDGFEIA--PGYRLQLGKAERRKDRMQNQMNSYKPNYL-PFQPQYMPPQPEHS 297
Query: 425 SGLGQQFL 432
+ L F+
Sbjct: 298 NNLYPSFI 305
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 81/162 (50%), Gaps = 7/162 (4%)
Query: 28 LTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARA 87
L +LYV L T L +FS+ G ++S ++ D S GYG++N+A+ +A +A
Sbjct: 93 LPGNLYVRGLLPTTTSDDLVRIFSRYGALVSCKIIYD-DFGVSKGYGFINFADRIEAQKA 151
Query: 88 LDVLNFTPLNNKSIRIMY--SHRDP----SIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
+D LN ++ + + + S RD +RK N+++KN + + L F +
Sbjct: 152 IDNLNGVNVDGNHLFVNHHISKRDRLKELEMRKLKYTNLYVKNFPDDLTKEKLAQVFGQY 211
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLI 183
G++ S + ++G+ F+ F++ E A A + L+G I
Sbjct: 212 GDVESVFLPQGTGNHNRGYAFINFKSHEDAVRAQENLDGFEI 253
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 83/189 (43%), Gaps = 26/189 (13%)
Query: 213 VKNLDESTTDEDLKKIFGE---YGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEAL 269
+K ++S E+L +F Y + V+ G+ +S F FE D K E L
Sbjct: 16 IKMYEDSAVLENLLAVFKNTYNYPEVNCEVL--KGNSESPKTVFARFEEKDHFEKFKEFL 73
Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLK 329
+ D E+ + E ELK Q NLY++ L + + L
Sbjct: 74 EQR---DIEY------EHVATEHELKKQLPG------------NLYVRGLLPTTTSDDLV 112
Query: 330 ELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQR 389
+FS +G + SCK++ D G+SKG GF+ F+ EA +A+ +NG + L+V
Sbjct: 113 RIFSRYGALVSCKIIYDDFGVSKGYGFINFADRIEAQKAIDNLNGVNVDGNHLFVNHHIS 172
Query: 390 KEERRARLQ 398
K +R L+
Sbjct: 173 KRDRLKELE 181
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 18/88 (20%)
Query: 23 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVC--------------RDLSTR 68
+G Q+ ++LY+ L D LY+LF+ GQ++S ++ D ++
Sbjct: 322 AGPQYQDSNLYIIHLPLEFKDQDLYELFAPFGQIMSAKIMTYPPNDSAVIDEGEEDTESK 381
Query: 69 ----RSLGYGYVNYANPADAARALDVLN 92
RS G+G+V + P DA++AL +N
Sbjct: 382 SREGRSRGFGFVCFNKPLDASKALVSMN 409
>gi|147863122|emb|CAN82975.1| hypothetical protein VITISV_026120 [Vitis vinifera]
Length = 213
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 74/96 (77%), Positives = 82/96 (85%)
Query: 342 KVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQF 401
+VMRDP+GIS+GSGFVAFST +EASR LA+MNGKM+ SKPLYVA+AQ KE+RR RLQAQF
Sbjct: 103 QVMRDPNGISRGSGFVAFSTAKEASRVLADMNGKMVASKPLYVALAQWKEDRRTRLQAQF 162
Query: 402 SQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAP 437
SQMRP AM PSV PRM MYPPG GLGQQ YGQ P
Sbjct: 163 SQMRPTAMAPSVGPRMSMYPPGTPGLGQQLFYGQGP 198
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 35/61 (57%)
Query: 240 VMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFE 299
VMRD +G S+ GFV F A +A++ + +NGK + YV AQ K +R L+ QF
Sbjct: 104 VMRDPNGISRGSGFVAFSTAKEASRVLADMNGKMVASKPLYVALAQWKEDRRTRLQAQFS 163
Query: 300 Q 300
Q
Sbjct: 164 Q 164
>gi|405946351|gb|EKC17616.1| Polyadenylate-binding protein 4 [Crassostrea gigas]
Length = 199
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 80/170 (47%), Positives = 118/170 (69%), Gaps = 7/170 (4%)
Query: 255 NFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNL 314
+FE+ + A KAVEALNG + YV QK+ ER+ ELK +F++ E ++++QG+NL
Sbjct: 3 SFEDPEAAEKAVEALNGNDNAGKIIYVRCDQKEIERQAELKEKFQRIRMERINRYQGVNL 62
Query: 315 YIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNG 374
Y+KNL D+IDD +L++ F++FGTITS KVM G SKG GFV F +PEEA++A+ EMN
Sbjct: 63 YVKNLADNIDDVRLRKEFAQFGTITSAKVMTTEDGRSKGFGFVCFRSPEEAAKAIVEMNE 122
Query: 375 KMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGP 424
K+I ++PLYVA+AQ+K++R+A+L +Q+ M + MP + GP
Sbjct: 123 KLIEARPLYVALAQKKQDRKAQLASQY-------MQRTSSRDMPEHRIGP 165
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/200 (42%), Positives = 120/200 (60%), Gaps = 24/200 (12%)
Query: 165 FENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFN-------------NV 211
FE+ E+A+ A++ LNG K ++V ++ ER+ +K KF N+
Sbjct: 4 FEDPEAAEKAVEALNGNDNAGKIIYVRCDQKEIERQA-ELKEKFQRIRMERINRYQGVNL 62
Query: 212 FVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNG 271
+VKNL ++ D L+K F ++GTITSA VM DG+SK FGFV F + ++AAKA+ +N
Sbjct: 63 YVKNLADNIDDVRLRKEFAQFGTITSAKVMTTEDGRSKGFGFVCFRSPEEAAKAIVEMNE 122
Query: 272 KKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQ-------GLNLYIKNLGDSID 324
K + R YV AQKK +R+ +L Q+ M+ T + G+NL+IKNL SID
Sbjct: 123 KLIEARPLYVALAQKKQDRKAQLASQY---MQRTSSRDMPEHRIGPGVNLFIKNLDKSID 179
Query: 325 DEKLKELFSEFGTITSCKVM 344
DEKL+E FS+FGTITS KV+
Sbjct: 180 DEKLREEFSQFGTITSAKVV 199
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 76/139 (54%), Gaps = 16/139 (11%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKL 178
N+++KNL +ID L F+ FG I S K+ T G+SKGFGFV F + E A AI ++
Sbjct: 61 NLYVKNLADNIDDVRLRKEFAQFGTITSAKVMTTEDGRSKGFGFVCFRSPEEAAKAIVEM 120
Query: 179 NGMLINDKQVFVGHFLRKQERETVAIKTKFN----------------NVFVKNLDESTTD 222
N LI + ++V +KQ+R+ N+F+KNLD+S D
Sbjct: 121 NEKLIEARPLYVALAQKKQDRKAQLASQYMQRTSSRDMPEHRIGPGVNLFIKNLDKSIDD 180
Query: 223 EDLKKIFGEYGTITSAVVM 241
E L++ F ++GTITSA V+
Sbjct: 181 EKLREEFSQFGTITSAKVV 199
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 84/169 (49%), Gaps = 25/169 (14%)
Query: 3 QIQVQHQAQMSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVC 62
Q +++ QA++ N++ +LYV +L N+ D +L F+Q G + S +V
Sbjct: 33 QKEIERQAELKEKFQRIRMERINRYQGVNLYVKNLADNIDDVRLRKEFAQFGTITSAKV- 91
Query: 63 RDLSTR--RSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMY--------------- 105
++T RS G+G+V + +P +AA+A+ +N + + + +
Sbjct: 92 --MTTEDGRSKGFGFVCFRSPEEAAKAIVEMNEKLIEARPLYVALAQKKQDRKAQLASQY 149
Query: 106 ----SHRDPSIRKSGTG-NIFIKNLDKSIDHKALHDTFSSFGNILSCKI 149
S RD + G G N+FIKNLDKSID + L + FS FG I S K+
Sbjct: 150 MQRTSSRDMPEHRIGPGVNLFIKNLDKSIDDEKLREEFSQFGTITSAKV 198
>gi|47198027|emb|CAF89020.1| unnamed protein product [Tetraodon nigroviridis]
Length = 383
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 75/157 (47%), Positives = 109/157 (69%), Gaps = 2/157 (1%)
Query: 189 FVGHFLRKQERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDG 246
FVG+F ++ERE + KF NV++KN E TDE LK++F +G S VM+D G
Sbjct: 1 FVGNFKSRKEREEELGSKALKFTNVYIKNFGEDYTDEKLKEVFSAFGRTLSVRVMKDERG 60
Query: 247 KSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETV 306
+S+ FGFVNF + DA KAV+ +NG + + + YVG+AQK+ ER+ ELK +FE ++ +
Sbjct: 61 RSRGFGFVNFAHHGDAQKAVDEMNGTELNGKVIYVGRAQKRLERQGELKRKFELIKQDRI 120
Query: 307 DKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKV 343
++QG+NLY+KNL D IDDE+L++ F+ +GTITS KV
Sbjct: 121 QRYQGVNLYVKNLDDGIDDERLRKEFAPYGTITSAKV 157
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 79/135 (58%), Gaps = 14/135 (10%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKL 178
N++IKN + + L + FS+FG LS ++ D G+S+GFGFV F + AQ A+D++
Sbjct: 24 NVYIKNFGEDYTDEKLKEVFSAFGRTLSVRVMKDERGRSRGFGFVNFAHHGDAQKAVDEM 83
Query: 179 NGMLINDKQVFVGHFLRKQERETVAIKTKFN-------------NVFVKNLDESTTDEDL 225
NG +N K ++VG ++ ER+ +K KF N++VKNLD+ DE L
Sbjct: 84 NGTELNGKVIYVGRAQKRLERQG-ELKRKFELIKQDRIQRYQGVNLYVKNLDDGIDDERL 142
Query: 226 KKIFGEYGTITSAVV 240
+K F YGTITSA V
Sbjct: 143 RKEFAPYGTITSAKV 157
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 75/122 (61%), Gaps = 10/122 (8%)
Query: 280 YVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTIT 339
+VG + + ERE+EL +A+K T N+YIKN G+ DEKLKE+FS FG
Sbjct: 1 FVGNFKSRKEREEELG---SKALKFT-------NVYIKNFGEDYTDEKLKEVFSAFGRTL 50
Query: 340 SCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQA 399
S +VM+D G S+G GFV F+ +A +A+ EMNG + K +YV AQ++ ER+ L+
Sbjct: 51 SVRVMKDERGRSRGFGFVNFAHHGDAQKAVDEMNGTELNGKVIYVGRAQKRLERQGELKR 110
Query: 400 QF 401
+F
Sbjct: 111 KF 112
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 74/137 (54%), Gaps = 19/137 (13%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
T++Y+ + + TD +L ++FS G+ LSVRV +D RS G+G+VN+A+ DA +A+D
Sbjct: 23 TNVYIKNFGEDYTDEKLKEVFSAFGRTLSVRVMKD-ERGRSRGFGFVNFAHHGDAQKAVD 81
Query: 90 VLNFTPLNNKSIRIMYSHR-----------------DPSIRKSGTGNIFIKNLDKSIDHK 132
+N T LN K I + + + D R G N+++KNLD ID +
Sbjct: 82 EMNGTELNGKVIYVGRAQKRLERQGELKRKFELIKQDRIQRYQGV-NLYVKNLDDGIDDE 140
Query: 133 ALHDTFSSFGNILSCKI 149
L F+ +G I S K+
Sbjct: 141 RLRKEFAPYGTITSAKV 157
>gi|55417872|gb|AAV50098.1| polyadenylate binding protein [Caenorhabditis remanei]
Length = 179
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/145 (55%), Positives = 99/145 (68%)
Query: 284 AQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKV 343
AQKKSER ELK + EQ E + K+QG+NLY+KNL +S+DDE LK+ F FG ITS KV
Sbjct: 1 AQKKSERHAELKKKHEQHKVERMQKYQGVNLYVKNLDESVDDEALKKQFENFGNITSAKV 60
Query: 344 MRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQ 403
M D +G SKG GFV F PEEA+ A+ EMN KM+ SKPLYVA+AQRKE+RRA+L +Q+ Q
Sbjct: 61 MTDENGRSKGFGFVCFEKPEEATTAVTEMNSKMVCSKPLYVALAQRKEDRRAQLASQYMQ 120
Query: 404 MRPVAMGPSVPPRMPMYPPGPSGLG 428
S P MY P +G G
Sbjct: 121 RLASMRMHSNVPGGGMYNPAQTGPG 145
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 66/110 (60%), Gaps = 2/110 (1%)
Query: 195 RKQERETVAIKTKFN--NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFG 252
+K E+ V K+ N++VKNLDES DE LKK F +G ITSA VM D +G+SK FG
Sbjct: 13 KKHEQHKVERMQKYQGVNLYVKNLDESVDDEALKKQFENFGNITSAKVMTDENGRSKGFG 72
Query: 253 FVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAM 302
FV FE ++A AV +N K + YV AQ+K +R +L Q+ Q +
Sbjct: 73 FVCFEKPEEATTAVTEMNSKMVCSKPLYVALAQRKEDRRAQLASQYMQRL 122
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 61/93 (65%)
Query: 107 HRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFE 166
H+ ++K N+++KNLD+S+D +AL F +FGNI S K+ TD +G+SKGFGFV FE
Sbjct: 18 HKVERMQKYQGVNLYVKNLDESVDDEALKKQFENFGNITSAKVMTDENGRSKGFGFVCFE 77
Query: 167 NKESAQNAIDKLNGMLINDKQVFVGHFLRKQER 199
E A A+ ++N ++ K ++V RK++R
Sbjct: 78 KPEEATTAVTEMNSKMVCSKPLYVALAQRKEDR 110
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Query: 26 QFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAA 85
++ +LYV +LD +V D L F G + S +V D RS G+G+V + P +A
Sbjct: 25 KYQGVNLYVKNLDESVDDEALKKQFENFGNITSAKVMTD-ENGRSKGFGFVCFEKPEEAT 83
Query: 86 RALDVLNFTPLNNKSIRIMYSHRDPSIR 113
A+ +N + +K + + + R R
Sbjct: 84 TAVTEMNSKMVCSKPLYVALAQRKEDRR 111
>gi|156837090|ref|XP_001642579.1| hypothetical protein Kpol_1075p1a [Vanderwaltozyma polyspora DSM
70294]
gi|156113126|gb|EDO14721.1| hypothetical protein Kpol_1075p1a [Vanderwaltozyma polyspora DSM
70294]
Length = 264
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 116/290 (40%), Positives = 149/290 (51%), Gaps = 51/290 (17%)
Query: 292 QELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGIS 351
QELK Q+E A E + K+QG+NL++KNL DS+DDEKL+E FS FGTI S KVMR G S
Sbjct: 1 QELKKQYEAARLEKMTKYQGVNLFVKNLDDSVDDEKLQEEFSPFGTIISAKVMRTEDGKS 60
Query: 352 KGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQF---SQMRPVA 408
K GFV FSTPEEA+RA+ E N +++ KPLYVA+AQRKE RRA+L Q +QMR
Sbjct: 61 KNFGFVCFSTPEEATRAITEKNQQIVAGKPLYVAIAQRKEVRRAQLAQQVQARNQMRYQQ 120
Query: 409 MGPSVPPRMPMYPPGPSGLGQQFL----YGQAPPAIIPPQMPPRGHAYRYPLGRNMQDFP 464
+ +G+ QFL YG MPPRG P
Sbjct: 121 ATAAA---------AAAGIPGQFLQPMFYGV---------MPPRG-------------VP 149
Query: 465 FDMGAGSMLPVPVDM---GAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYP 521
F+ M VP G G+ G MP ++QR LGE LY
Sbjct: 150 FNGPNPQMSGVPPQQFRNGPGV------YG--MPAQGSFPPNDQFFQQKQRQALGEELYK 201
Query: 522 LV--EQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRS 569
V + + +AA K+TGM+L++ EV+ LLE+ E + EA S
Sbjct: 202 KVSAKTSDEEAAGKITGMILDLPPQEVMPLLENNELFEQHFKEAFAAYES 251
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 55/90 (61%)
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEAL 269
N+FVKNLD+S DE L++ F +GTI SA VMR DGKSK FGFV F ++A +A+
Sbjct: 22 NLFVKNLDDSVDDEKLQEEFSPFGTIISAKVMRTEDGKSKNFGFVCFSTPEEATRAITEK 81
Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFE 299
N + + YV AQ+K R +L Q +
Sbjct: 82 NQQIVAGKPLYVAIAQRKEVRRAQLAQQVQ 111
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 48/81 (59%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKL 178
N+F+KNLD S+D + L + FS FG I+S K+ G+SK FGFV F E A AI +
Sbjct: 22 NLFVKNLDDSVDDEKLQEEFSPFGTIISAKVMRTEDGKSKNFGFVCFSTPEEATRAITEK 81
Query: 179 NGMLINDKQVFVGHFLRKQER 199
N ++ K ++V RK+ R
Sbjct: 82 NQQIVAGKPLYVAIAQRKEVR 102
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
+L+V +LD +V D +L + FS G ++S +V R +S +G+V ++ P +A RA+
Sbjct: 21 VNLFVKNLDDSVDDEKLQEEFSPFGTIISAKVMR-TEDGKSKNFGFVCFSTPEEATRAIT 79
Query: 90 VLNFTPLNNKSIRIMYSHR 108
N + K + + + R
Sbjct: 80 EKNQQIVAGKPLYVAIAQR 98
>gi|331243001|ref|XP_003334145.1| hypothetical protein PGTG_15382 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309313135|gb|EFP89726.1| hypothetical protein PGTG_15382 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 311
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/270 (34%), Positives = 142/270 (52%), Gaps = 11/270 (4%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRV-CRDLSTRRSLGYGYVNYANPADAARALD 89
S+YVGDL N+T+ +L +FSQ VLSV++ S + Y Y+ Y++ A+
Sbjct: 29 SVYVGDLPANITEEELIKVFSQASPVLSVQIKFPSRSVKGPRAYAYIAYSSADKVDEAIR 88
Query: 90 VLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKI 149
N T K R+M R ++ N+F+++L ++ A HDTF+ FG ILS ++
Sbjct: 89 EYNHTKFAGKPCRVMKPKRG-IVKGPPEANVFVQDLPLALSALAFHDTFAEFGEILSSRL 147
Query: 150 ATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLIN----DKQVFVGHFLRK---QERETV 202
+ D SKG+GF+Q+ E AQ AI + NG L++ +K + F++K +
Sbjct: 148 SVDRENVSKGYGFIQYATVEQAQAAIAETNGSLLDVAGGEKPIRTSIFVKKDAPSSPTSR 207
Query: 203 AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDA 262
A +F N+F KNL T E K + +YG ITSAV+ D DGK F +F+N DA
Sbjct: 208 AAAREFKNLFFKNLPADITLEAFKATWSKYGVITSAVLTVDEDGKPTGTAFASFQNHSDA 267
Query: 263 AKAVEALNGKKFDDREWYVGKAQKKSEREQ 292
+ ++A K D E Y +A K+ER +
Sbjct: 268 VRVIKATQRKGPD--EVYAVRALSKAERTR 295
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 105/253 (41%), Gaps = 12/253 (4%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIA--TDGSGQSKGFGFVQFENKESAQNAID 176
++++ +L +I + L FS +LS +I + + + ++ + + + AI
Sbjct: 29 SVYVGDLPANITEEELIKVFSQASPVLSVQIKFPSRSVKGPRAYAYIAYSSADKVDEAIR 88
Query: 177 KLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTIT 236
+ N K V K +R V + NVFV++L + + F E+G I
Sbjct: 89 EYNHTKFAGKPCRV----MKPKRGIVKGPPE-ANVFVQDLPLALSALAFHDTFAEFGEIL 143
Query: 237 SAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKG 296
S+ + D + SK +GF+ + + A A+ NG D V +K +K
Sbjct: 144 SSRLSVDRENVSKGYGFIQYATVEQAQAAIAETNGSLLD-----VAGGEKPIRTSIFVKK 198
Query: 297 QFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGF 356
+ + NL+ KNL I E K +S++G ITS + D G G+ F
Sbjct: 199 DAPSSPTSRAAAREFKNLFFKNLPADITLEAFKATWSKYGVITSAVLTVDEDGKPTGTAF 258
Query: 357 VAFSTPEEASRAL 369
+F +A R +
Sbjct: 259 ASFQNHSDAVRVI 271
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 86/172 (50%), Gaps = 21/172 (12%)
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVM---RDGDGKSKCFGFVNFENADDAAKA 265
++V+V +L + T+E+L K+F + + S + R G + + ++ + +AD +A
Sbjct: 28 HSVYVGDLPANITEEELIKVFSQASPVLSVQIKFPSRSVKG-PRAYAYIAYSSADKVDEA 86
Query: 266 VEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDD 325
+ N KF + V K ++ +KG E N+++++L ++
Sbjct: 87 IREYNHTKFAGKPCRVMKPKRGI-----VKGPPEA------------NVFVQDLPLALSA 129
Query: 326 EKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMI 377
+ F+EFG I S ++ D +SKG GF+ ++T E+A A+AE NG ++
Sbjct: 130 LAFHDTFAEFGEILSSRLSVDRENVSKGYGFIQYATVEQAQAAIAETNGSLL 181
>gi|388492458|gb|AFK34295.1| unknown [Medicago truncatula]
Length = 107
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 77/99 (77%), Positives = 89/99 (89%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+ AL+TALANA PEQQRT+LGE LYPLVE++E AAKVTGMLLEMDQ EVLHL+ESPE
Sbjct: 9 PMQALATALANAPPEQQRTMLGEVLYPLVEKIEHAGAAKVTGMLLEMDQPEVLHLIESPE 68
Query: 555 ALKAKVAEAMEVLRSVAQQQANNPADQLASLSLNENLVS 593
ALK KVAEA++VLR+VAQQQ+N+P DQLASLSLN+NL S
Sbjct: 69 ALKTKVAEAVDVLRNVAQQQSNSPTDQLASLSLNDNLES 107
>gi|294879376|ref|XP_002768666.1| glycine-rich RNA-binding protein, putative [Perkinsus marinus ATCC
50983]
gi|239871376|gb|EER01384.1| glycine-rich RNA-binding protein, putative [Perkinsus marinus ATCC
50983]
Length = 342
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/233 (37%), Positives = 128/233 (54%), Gaps = 41/233 (17%)
Query: 208 FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVE 267
F NV++K++ S T+E +++ FG +G ITS + D G+ F FVNF + A AVE
Sbjct: 4 FTNVYIKHIPPSWTEEKIREEFGAFGEITSFAMQTDPKGRR--FAFVNFAEFEQARAAVE 61
Query: 268 ALNGKKFDDRE---------------------------------------WYVGKAQKKS 288
++G+ + E YV +AQ K+
Sbjct: 62 DMDGEDVRNEEEKAADKAQREREREERRVAREAVGDEVESDDDVEPESYRLYVARAQSKA 121
Query: 289 EREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPS 348
ER LK QF +F G+NLY+KNLG+++DD +LK +F FGTITS KVM D
Sbjct: 122 ERAAVLKEQFAAGKGAQGGRFGGVNLYVKNLGETVDDNELKRMFEPFGTITSVKVMTDDK 181
Query: 349 GISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQF 401
G+S+G GFV FST EEA++A+ +M+ K+I KPLYV + +++E+R RLQ ++
Sbjct: 182 GVSRGFGFVCFSTHEEATKAVTDMHLKLIGGKPLYVGMHEKREQRLERLQQRY 234
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 106/232 (45%), Gaps = 55/232 (23%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKL 178
N++IK++ S + + + F +FG I S + TD G+ F FV F E A+ A++ +
Sbjct: 6 NVYIKHIPPSWTEEKIREEFGAFGEITSFAMQTDPKGRR--FAFVNFAEFEQARAAVEDM 63
Query: 179 NGMLINDKQ---------------------------------------VFVGHFLRKQER 199
+G + +++ ++V K ER
Sbjct: 64 DGEDVRNEEEKAADKAQREREREERRVAREAVGDEVESDDDVEPESYRLYVARAQSKAER 123
Query: 200 ETVAIKTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDG 246
V +K +F N++VKNL E+ D +LK++F +GTITS VM D G
Sbjct: 124 AAV-LKEQFAAGKGAQGGRFGGVNLYVKNLGETVDDNELKRMFEPFGTITSVKVMTDDKG 182
Query: 247 KSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQF 298
S+ FGFV F ++A KAV ++ K + YVG +K+ +R + L+ ++
Sbjct: 183 VSRGFGFVCFSTHEEATKAVTDMHLKLIGGKPLYVGMHEKREQRLERLQQRY 234
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 49/84 (58%)
Query: 116 GTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAI 175
G N+++KNL +++D L F FG I S K+ TD G S+GFGFV F E A A+
Sbjct: 143 GGVNLYVKNLGETVDDNELKRMFEPFGTITSVKVMTDDKGVSRGFGFVCFSTHEEATKAV 202
Query: 176 DKLNGMLINDKQVFVGHFLRKQER 199
++ LI K ++VG ++++R
Sbjct: 203 TDMHLKLIGGKPLYVGMHEKREQR 226
>gi|365760899|gb|EHN02583.1| Pes4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 598
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 111/386 (28%), Positives = 186/386 (48%), Gaps = 59/386 (15%)
Query: 32 LYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVL 91
L++GDL VT+ L +F + +S +VC D T++SLG+GY+N+ + +A RA++ L
Sbjct: 80 LFIGDLHETVTEETLKGIFGKFPSFVSAKVCLDSITKKSLGHGYLNFEDKEEAERAMEEL 139
Query: 92 NFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNL---DKSIDHKALHDTFSSFGNILSCK 148
N+T +N + IRIM S R+ + RK+ N+F NL + + + +DTFS +G ILSCK
Sbjct: 140 NYTDVNGREIRIMPSLRNTTFRKNFGTNVFFSNLPLNNPLLTTRVFYDTFSRYGKILSCK 199
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER--------- 199
+ + K GFV FEN+++A+N I N K++ G K+ R
Sbjct: 200 LDS-----RKDIGFVYFENEKTARNVIKMYNNTSFFGKKILCGIHFDKEVRSVPNFETQK 254
Query: 200 -----ETVAIKTKF---------------------NNVFVKNLDESTTDEDLKKIFGEYG 233
ET+ K + N++F+KNL TT +D+ F E G
Sbjct: 255 SRLDAETIIEKEQALNATQLKRNDGASKNNQSSSQNSIFIKNLPIITTRDDVLNFFSEVG 314
Query: 234 TITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQE 293
I S + + + + FV +++ +D+ KA++ N F ++ V +AQ K ER +
Sbjct: 315 PIKS-IYLSNATKVKYLWAFVTYKSNEDSEKAIKRYNNFYFRGKKLLVSRAQDKEERAKF 373
Query: 294 LKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKG 353
++ Q + L+++NL + E LK L + I K+ D S
Sbjct: 374 IESQ------------KMSTLFLENLSAVCNKEFLKYLCHQ-ENIRPFKIQIDGYNESSA 420
Query: 354 --SGFVAFSTPEEASRALAEMNGKMI 377
SG + F E+A+R +N +++
Sbjct: 421 TYSGHIKFRNFEDATRIFNFLNNRLV 446
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 87/202 (43%), Gaps = 33/202 (16%)
Query: 211 VFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENADDAAKAVEAL 269
+F+ +L E+ T+E LK IFG++ + SA V D KS G++NFE+ ++A +A+E L
Sbjct: 80 LFIGDLHETVTEETLKGIFGKFPSFVSAKVCLDSITKKSLGHGYLNFEDKEEAERAMEEL 139
Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL---GDSIDDE 326
N + RE + + + + T K G N++ NL +
Sbjct: 140 NYTDVNGREIRIMPSLRNT----------------TFRKNFGTNVFFSNLPLNNPLLTTR 183
Query: 327 KLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 386
+ FS +G I SCK+ K GFV F + A + N K + +
Sbjct: 184 VFYDTFSRYGKILSCKL-----DSRKDIGFVYFENEKTARNVIKMYNNTSFFGKKILCGI 238
Query: 387 AQRKEER--------RARLQAQ 400
KE R ++RL A+
Sbjct: 239 HFDKEVRSVPNFETQKSRLDAE 260
>gi|62321453|dbj|BAD94856.1| poly(A)-binding protein [Arabidopsis thaliana]
Length = 126
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 87/145 (60%), Positives = 104/145 (71%), Gaps = 22/145 (15%)
Query: 444 QMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALSTAL 503
QM PRG +RYP GR G+G + P DMG +P + I AL++ L
Sbjct: 4 QMHPRGRMFRYPQGRG--------GSGDV--PPYDMGNNMP---------LTIGALASNL 44
Query: 504 ANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEA 563
+NA+PEQQRT+LGE LYPLVEQ+E ++AAKVTGMLLEMDQTEVLHLLESPEALKAKVAEA
Sbjct: 45 SNATPEQQRTMLGEVLYPLVEQVEAESAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEA 104
Query: 564 MEVLRSVAQQQANNPADQLASLSLN 588
M+VLRSVA A +QLASL+L+
Sbjct: 105 MDVLRSVA---AGGATEQLASLNLS 126
>gi|18677184|gb|AAL78224.1|AF345796_1 hypothetical protein Hgg-30 [Heterodera glycines]
Length = 219
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 84/184 (45%), Positives = 118/184 (64%), Gaps = 5/184 (2%)
Query: 276 DREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEF 335
++++ V +AQKKSER+ ELK ++EQ E + ++QG+NLY+KNL D+I+DE L+ F +
Sbjct: 13 EQKFTVCRAQKKSERQAELKRRYEQYKAERIQRYQGVNLYVKNLHDTINDETLRSNFESY 72
Query: 336 GTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRA 395
G ITS KVM D G SKG GFV F +EA++A+ EMN K+I +KPLYVA+AQRKE+R+A
Sbjct: 73 GNITSAKVMCDEHGRSKGFGFVCFEKADEATKAVVEMNNKIIENKPLYVALAQRKEDRKA 132
Query: 396 RLQAQFSQMRPVAMGPSVPPRM--PMYPPGPSGLG-QQFLYGQAPPAIIPPQMPPRG-HA 451
+L +Q+ Q R AM P + MY P G Q + Q A+ RG +A
Sbjct: 133 QLASQYMQ-RLAAMRMQNPAGLMGTMYAPASGGFFLPQAIQNQRAXAVHANTESVRGTNA 191
Query: 452 YRYP 455
+R P
Sbjct: 192 WRCP 195
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 61/93 (65%)
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEAL 269
N++VKNL ++ DE L+ F YG ITSA VM D G+SK FGFV FE AD+A KAV +
Sbjct: 50 NLYVKNLHDTINDETLRSNFESYGNITSAKVMCDEHGRSKGFGFVCFEKADEATKAVVEM 109
Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAM 302
N K +++ YV AQ+K +R+ +L Q+ Q +
Sbjct: 110 NNKIIENKPLYVALAQRKEDRKAQLASQYMQRL 142
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 53/82 (64%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKL 178
N+++KNL +I+ + L F S+GNI S K+ D G+SKGFGFV FE + A A+ ++
Sbjct: 50 NLYVKNLHDTINDETLRSNFESYGNITSAKVMCDEHGRSKGFGFVCFEKADEATKAVVEM 109
Query: 179 NGMLINDKQVFVGHFLRKQERE 200
N +I +K ++V RK++R+
Sbjct: 110 NNKIIENKPLYVALAQRKEDRK 131
>gi|320581163|gb|EFW95384.1| poly(A) binding protein [Ogataea parapolymorpha DL-1]
Length = 716
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 120/417 (28%), Positives = 196/417 (47%), Gaps = 56/417 (13%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
TSL+VGDLD ++++ L ++F++ +LSV++ D T SLGYGYVNY+N A A++
Sbjct: 180 TSLFVGDLDKSLSELDLKNVFNKYPGLLSVKIPADCQTGNSLGYGYVNYSNEDQANFAME 239
Query: 90 VLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKI 149
LN+T + + IRIM S RD S R+ N+F+ NL + + L+D F GN+LSCK
Sbjct: 240 SLNYTTIGSSEIRIMPSLRDKSQRERIGANVFLSNLSSHLTTRQLYDRFRKHGNVLSCKY 299
Query: 150 ATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERE----TVAIK 205
D S Q F+ FE+KE A + N ++ + V+VG + K++RE T +
Sbjct: 300 --DSSKQQ---AFIHFESKEVAYEVVKTYNHTTLDGRLVYVGLHILKKDRELFGATASAS 354
Query: 206 TK----------------FNN------------VFVKNLDESTTDEDLKKIFGEYGTITS 237
+K F N +FV+NL + + +K + YG + S
Sbjct: 355 SKLTEKRDISQIPTFSPTFQNTKHKNDISTHYSIFVRNLPLNIEEHVIKSLVEPYGPVLS 414
Query: 238 AVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQ 297
V+ R K+ C+ V N + KAV LN + + ++ +V +A K E+ K +
Sbjct: 415 -VLARKVPKKNGCWALVTLSNQESVDKAVSHLNMVEINKQQLFVTRAIPKEEKSYSRKQE 473
Query: 298 FEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFV 357
+ K L + I L + +K + FG+I S ++ +K G+
Sbjct: 474 VQPKYK--------LKILITGLNVNTHKDKFQNWCLTFGSIKSVELYGTYPQENK-KGYT 524
Query: 358 AFSTPEEASRALAEM---NGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGP 411
A+ E + A A++ N K++ + V V + +E + MR GP
Sbjct: 525 AYGYVEMVNEADADVLIDNLKLLGVRCFKVKVEIQDKE------TVITDMRRYHCGP 575
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 98/213 (46%), Gaps = 29/213 (13%)
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGD-GKSKCFGFVNFENADDAAKAVEA 268
++FV +LD+S ++ DLK +F +Y + S + D G S +G+VN+ N D A A+E+
Sbjct: 181 SLFVGDLDKSLSELDLKNVFNKYPGLLSVKIPADCQTGNSLGYGYVNYSNEDQANFAMES 240
Query: 269 LNGKKFDDREWYVGKAQK-KSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEK 327
LN E + + + KS+RE+ G N+++ NL + +
Sbjct: 241 LNYTTIGSSEIRIMPSLRDKSQRER-----------------IGANVFLSNLSSHLTTRQ 283
Query: 328 LKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 387
L + F + G + SCK SK F+ F + E A + N + + +YV +
Sbjct: 284 LYDRFRKHGNVLSCKY-----DSSKQQAFIHFESKEVAYEVVKTYNHTTLDGRLVYVGLH 338
Query: 388 QRKEERR-----ARLQAQFSQMRPVAMGPSVPP 415
K++R A ++ ++ R ++ P+ P
Sbjct: 339 ILKKDRELFGATASASSKLTEKRDISQIPTFSP 371
>gi|410074177|ref|XP_003954671.1| hypothetical protein KAFR_0A00980 [Kazachstania africana CBS 2517]
gi|372461253|emb|CCF55536.1| hypothetical protein KAFR_0A00980 [Kazachstania africana CBS 2517]
Length = 642
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 128/478 (26%), Positives = 207/478 (43%), Gaps = 64/478 (13%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
T L++G L +VT+S L +LF++ + SV++C D T++SLGYGY+N++ + R ++
Sbjct: 95 TPLFIGGLGPHVTESMLKELFNKFSSLYSVKICYDSETKKSLGYGYLNFSGSDEIDRVIE 154
Query: 90 VLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNL---DKSIDHKALHDTFSSFGNILS 146
N+T + I+IM S R+ RK+ NIF NL + + + +DTF +G ILS
Sbjct: 155 EFNYTEVFGSEIKIMPSLRNSLYRKNIGTNIFFSNLPLENSELTTRVFYDTFKKYGKILS 214
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVG--------------- 191
CK+ K GFV +E+ + A+ I+K N ++ G
Sbjct: 215 CKL-----DHRKNIGFVYYEDDKVAREVIEKYNNTTFFGAKILCGLHFDKELRNFPDFEK 269
Query: 192 -------HFLRKQERETVAIKTKF-----------NNVFVKNLDESTTDEDLKKIFGEYG 233
H + + E TV KT N VFVKNL TT++++ F G
Sbjct: 270 RKSYLDKHIILEDELNTVEGKTSMLTKIKSSLPHPNAVFVKNLPIDTTEDEILDFFSVVG 329
Query: 234 TITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQE 293
+ S + KS+ + F+ ++ D +A+E L+GKK+ DR+ V KA+ + ++
Sbjct: 330 PVKSVFTSKVLKFKSE-WAFITYKKGSDTERAIEELDGKKYKDRKISVTKAKARQQQHHH 388
Query: 294 LKGQFEQAMKETVDKFQG-LNLYIKNLGDSIDDEKLKEL-FSEFGTITSCKVMRDPSGIS 351
+ Q +Q + V K + + NL E L EL E K+
Sbjct: 389 HQQQQQQQQQPIVKKASTKTTIQLNNLSTICTKEFLVELCIQEHLKFDRLKITEYEPDSG 448
Query: 352 KGSGFVAFSTPEEASRALAEMNGKMI---VSKPLYVAVAQRKEERRARLQAQFSQMRPVA 408
GF F T ++A + +NGK++ V + A E + A +
Sbjct: 449 TFKGFATFKTKDDAKKFYNYLNGKLVGGSVINATFAAAKTNIGEADGKESANSETQGSAS 508
Query: 409 MGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPPQMPPRGHAYR--YPLGRNMQDFP 464
P+ PM P + +G PP+G R PL RN+Q+ P
Sbjct: 509 HFSMTKPQFPM----PLQYFNPYYWG-----------PPQGVHTRNVLPLYRNVQEMP 551
>gi|440302784|gb|ELP95091.1| polyadenylate-binding protein, cytoplasmic and nuclear, putative
[Entamoeba invadens IP1]
Length = 546
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/353 (29%), Positives = 179/353 (50%), Gaps = 23/353 (6%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQV--GQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+++V L NVTDS L + + +V+S+ V ++ S Y+N + A R +
Sbjct: 22 TIFVSGLTNNVTDSLLSSVVMEKFPTEVVSIHVTKNES-HFDTPIAYINMSTHDAAKRVI 80
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
LN ++ K I + ++ +D R N+F+KN+ KS++ K L D FS+ G LS K
Sbjct: 81 STLNGVMVDGKPINMFWALKDFKQRTDTQTNLFVKNIKKSVNQKELQDVFSAIGETLSVK 140
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLIN-DKQVFVGHFLRKQERETVAIKTK 207
++ + G+S GFG+V++ E+ Q A+DK + + ++ FV KQ K++
Sbjct: 141 LSLNEKGESNGFGYVKYRTLEATQAALDKSDELKAKIGEETFVVQKFEKQN------KSR 194
Query: 208 FNNVFVKNLDESTTDEDLKKIFGEYGTITSA------VVMRDGDGKSKCFGFVNFENADD 261
N++V N+D+ T+E K F +G I V+ + K GFV+FEN +D
Sbjct: 195 KTNLYVYNIDKKVTEEQFIKYFETFGPIRKTSDKKPQVLFVSEETKDTAKGFVDFENEED 254
Query: 262 AAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGD 321
AAKAV A + E V + K ER +E K + + K++ NLY+ L +
Sbjct: 255 AAKAVSAPKNSVLGNGEIVVAYYKNKEERRREWKAKTAEVKANIKGKYKDFNLYVDTLKE 314
Query: 322 SIDDEKLKELFSEFGTITSCKVM---RDPSGISKGSGFVAFSTPEEASRALAE 371
SI +++++E E G I S + R P+G++ ++ ++T E A+ A+ +
Sbjct: 315 SITEKEIREGLGEEGEIYSLSIRWVDRKPTGVA----YLCYTTAEGANNAIVK 363
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 119/257 (46%), Gaps = 25/257 (9%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
T+L+V ++ +V +L D+FS +G+ LSV++ + S G+GYV Y ALD
Sbjct: 110 TNLFVKNIKKSVNQKELQDVFSAIGETLSVKLSLN-EKGESNGFGYVKYRTLEATQAALD 168
Query: 90 VLN--FTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSC 147
+ + ++ + + RK+ N+++ N+DK + + F +FG I
Sbjct: 169 KSDELKAKIGEETFVVQKFEKQNKSRKT---NLYVYNIDKKVTEEQFIKYFETFGPIRKT 225
Query: 148 K------IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERE- 200
+ + GFV FEN+E A A+ ++ + ++ V ++ K+ER
Sbjct: 226 SDKKPQVLFVSEETKDTAKGFVDFENEEDAAKAVSAPKNSVLGNGEIVVAYYKNKEERRR 285
Query: 201 ---------TVAIKTKFN--NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSK 249
IK K+ N++V L ES T++++++ GE G I S + +R D K
Sbjct: 286 EWKAKTAEVKANIKGKYKDFNLYVDTLKESITEKEIREGLGEEGEIYS-LSIRWVDRKPT 344
Query: 250 CFGFVNFENADDAAKAV 266
++ + A+ A A+
Sbjct: 345 GVAYLCYTTAEGANNAI 361
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 130/277 (46%), Gaps = 35/277 (12%)
Query: 144 ILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLR--KQERET 201
++S + + S ++ ++A+ I LNG++++ K + + L+ KQ +T
Sbjct: 49 VVSIHVTKNESHFDTPIAYINMSTHDAAKRVISTLNGVMVDGKPINMFWALKDFKQRTDT 108
Query: 202 VAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADD 261
N+FVKN+ +S ++L+ +F G S + + G+S FG+V + +
Sbjct: 109 QT------NLFVKNIKKSVNQKELQDVFSAIGETLSVKLSLNEKGESNGFGYVKYRTLEA 162
Query: 262 AAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGD 321
A++ K D+ + +G+ E + +FE+ +K + NLY+ N+
Sbjct: 163 TQAALD-----KSDELKAKIGE-------ETFVVQKFEKQ-----NKSRKTNLYVYNIDK 205
Query: 322 SIDDEKLKELFSEFGTI--TSCK------VMRDPSGISKGSGFVAFSTPEEASRALAEMN 373
+ +E+ + F FG I TS K V + +KG FV F E+A++A++
Sbjct: 206 KVTEEQFIKYFETFGPIRKTSDKKPQVLFVSEETKDTAKG--FVDFENEEDAAKAVSAPK 263
Query: 374 GKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMG 410
++ + + VA + KEERR +A+ ++++ G
Sbjct: 264 NSVLGNGEIVVAYYKNKEERRREWKAKTAEVKANIKG 300
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 76/200 (38%), Gaps = 37/200 (18%)
Query: 25 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVG----------QVLSVRVCRDLSTRRSLGYG 74
N+ T+LYV ++D VT+ Q F G QVL V + G
Sbjct: 191 NKSRKTNLYVYNIDKKVTEEQFIKYFETFGPIRKTSDKKPQVLFVS-----EETKDTAKG 245
Query: 75 YVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTG---------------- 118
+V++ N DAA+A+ + L N I + Y R+
Sbjct: 246 FVDFENEEDAAKAVSAPKNSVLGNGEIVVAYYKNKEERRREWKAKTAEVKANIKGKYKDF 305
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKL 178
N+++ L +SI K + + G I S I + G ++ + E A NAI +
Sbjct: 306 NLYVDTLKESITEKEIREGLGEEGEIYSLSIRW-VDRKPTGVAYLCYTTAEGANNAI--V 362
Query: 179 NGMLINDKQVFVGHFLRKQE 198
G + K V FL KQE
Sbjct: 363 KGTQLGWK---VFKFLNKQE 379
>gi|14318545|ref|NP_116678.1| Pes4p [Saccharomyces cerevisiae S288c]
gi|1172434|sp|P39684.2|PES4_YEAST RecName: Full=Protein PES4; AltName: Full=DNA polymerase epsilon
suppressor 4
gi|836778|dbj|BAA09262.1| DNA polymerase epsilon suppressor 4 [Saccharomyces cerevisiae]
gi|151940784|gb|EDN59171.1| poly(A) binding protein [Saccharomyces cerevisiae YJM789]
gi|207345636|gb|EDZ72395.1| YFR023Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256268849|gb|EEU04202.1| Pes4p [Saccharomyces cerevisiae JAY291]
gi|259146215|emb|CAY79474.1| Pes4p [Saccharomyces cerevisiae EC1118]
gi|285811918|tpg|DAA12463.1| TPA: Pes4p [Saccharomyces cerevisiae S288c]
gi|392299695|gb|EIW10788.1| Pes4p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 611
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 112/386 (29%), Positives = 187/386 (48%), Gaps = 59/386 (15%)
Query: 32 LYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVL 91
L++GDL VT+ L +F + +S +VC D T++SLG+GY+N+ + +A +A++ L
Sbjct: 93 LFIGDLHETVTEETLKGIFKKYPSFVSAKVCLDSVTKKSLGHGYLNFEDKEEAEKAMEEL 152
Query: 92 NFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNL---DKSIDHKALHDTFSSFGNILSCK 148
N+T +N K IRIM S R+ + RK+ N+F NL + + + +DTFS +G ILSCK
Sbjct: 153 NYTKVNGKEIRIMPSLRNTTFRKNFGTNVFFSNLPLNNPLLTTRVFYDTFSRYGKILSCK 212
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER--------- 199
+ + K GFV FE++++A+N I N K++ G K+ R
Sbjct: 213 LDS-----RKDIGFVYFEDEKTARNVIKMYNNTSFFGKKILCGIHFDKEVRSVPNFETQK 267
Query: 200 -----ETVAIKTKF---------------------NNVFVKNLDESTTDEDLKKIFGEYG 233
ET+ K + N++F+KNL TT +D+ F E G
Sbjct: 268 SRLDAETIIEKEQSLNEKHSKGNDKESKNIYSSSQNSIFIKNLPTITTRDDILNFFSEVG 327
Query: 234 TITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQE 293
I S + + + + FV ++N+ D+ KA++ N F ++ V +AQ K ER +
Sbjct: 328 PIKS-IYLSNATKVKYLWAFVTYKNSSDSEKAIKRYNNFYFRGKKLLVTRAQDKEERAKF 386
Query: 294 LKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRD--PSGIS 351
++ Q + L+++NL + E LK L + I K+ D S
Sbjct: 387 IESQ------------KISTLFLENLSAVCNKEFLKYLCHQ-ENIRPFKIQIDGYDENSS 433
Query: 352 KGSGFVAFSTPEEASRALAEMNGKMI 377
SGF+ F E+A+R +N +++
Sbjct: 434 TYSGFIKFRNFEDATRIFNFLNNRLV 459
>gi|190406596|gb|EDV09863.1| poly(A) binding protein [Saccharomyces cerevisiae RM11-1a]
Length = 611
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 112/386 (29%), Positives = 187/386 (48%), Gaps = 59/386 (15%)
Query: 32 LYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVL 91
L++GDL VT+ L +F + +S +VC D T++SLG+GY+N+ + +A +A++ L
Sbjct: 93 LFIGDLHETVTEETLKGIFKKYPSFVSAKVCLDSVTKKSLGHGYLNFEDKEEAEKAMEEL 152
Query: 92 NFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNL---DKSIDHKALHDTFSSFGNILSCK 148
N+T +N K IRIM S R+ + RK+ N+F NL + + + +DTFS +G ILSCK
Sbjct: 153 NYTKVNGKEIRIMPSLRNTTFRKNFGTNVFFSNLPLNNPLLTTRVFYDTFSRYGKILSCK 212
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER--------- 199
+ + K GFV FE++++A+N I N K++ G K+ R
Sbjct: 213 LDS-----RKDIGFVYFEDEKTARNVIKMYNNTSFFGKKILCGIHFDKEVRSVPNFETQK 267
Query: 200 -----ETVAIKTKF---------------------NNVFVKNLDESTTDEDLKKIFGEYG 233
ET+ K + N++F+KNL TT +D+ F E G
Sbjct: 268 SRLDAETIIEKEQSLNEKHSKGNDKESKNIYSSSQNSIFIKNLPTITTRDDILNFFSEVG 327
Query: 234 TITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQE 293
I S + + + + FV ++N+ D+ KA++ N F ++ V +AQ K ER +
Sbjct: 328 PIKS-IYLSNATKVKYLWAFVTYKNSSDSEKAIKRYNNFYFRGKKLLVTRAQDKEERAKF 386
Query: 294 LKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRD--PSGIS 351
++ Q + L+++NL + E LK L + I K+ D S
Sbjct: 387 IESQ------------KISTLFLENLSAVCNKEFLKYLCHQ-ENIRPFKIQIDGYDENSS 433
Query: 352 KGSGFVAFSTPEEASRALAEMNGKMI 377
SGF+ F E+A+R +N +++
Sbjct: 434 TYSGFIKFRNFEDATRIFNFLNNRLV 459
>gi|384248056|gb|EIE21541.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 537
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/260 (36%), Positives = 138/260 (53%), Gaps = 30/260 (11%)
Query: 199 RETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFEN 258
+E V T+ +VFV L + E LK++FG G + SAVVMRD G S+ FGFVNF
Sbjct: 14 QEAVNPATESCSVFVNGLSLEVSSETLKEVFGRVGRVASAVVMRDHFGASRGFGFVNFTK 73
Query: 259 ADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGL---NLY 315
AD+A +A++ N W V KA+K+ + ++ GQ + QGL NL+
Sbjct: 74 ADEADRAIQQFNKIPHCAGTWLVRKAEKR--KPEQKAGQVSE---------QGLDLCNLF 122
Query: 316 IKNLGDSIDDEKLKELFSEFGTITSCKVMRDP-SGISKGSGFVAFSTPEEASRALAEMNG 374
I+ + I +L+ +F FG + S K++ DP +G SK +GF+ F+ PEEA+RA+ EMNG
Sbjct: 123 IRGVEPEISSIRLQSMFEAFGKVVSSKILVDPKTGASKCAGFLRFTLPEEAARAIHEMNG 182
Query: 375 KMIVSKPLYVAVAQRK--EERRARLQAQFSQMRPVAMGPSVPPRM----------PMYPP 422
K + SK L+V +AQ++ + + + F Q A PS P M P YP
Sbjct: 183 KQVGSKRLFVTLAQKRATTDPQGIIHPPFEQ---SAAQPSTPTGMAYFMPMSGMAPQYPQ 239
Query: 423 GPSGLGQQFLYGQAPPAIIP 442
G G YG PP ++P
Sbjct: 240 GAHGHPAFQPYGMYPPGMVP 259
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 96/195 (49%), Gaps = 17/195 (8%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKL 178
++F+ L + + L + F G + S + D G S+GFGFV F + A AI +
Sbjct: 25 SVFVNGLSLEVSSETLKEVFGRVGRVASAVVMRDHFGASRGFGFVNFTKADEADRAIQQF 84
Query: 179 NGMLINDKQVFVGHFL------RKQERETVAIKTK---FNNVFVKNLDESTTDEDLKKIF 229
N + G +L RK E++ + + N+F++ ++ + L+ +F
Sbjct: 85 NKI-----PHCAGTWLVRKAEKRKPEQKAGQVSEQGLDLCNLFIRGVEPEISSIRLQSMF 139
Query: 230 GEYGTITSAVVMRD-GDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKS 288
+G + S+ ++ D G SKC GF+ F ++AA+A+ +NGK+ + +V AQK++
Sbjct: 140 EAFGKVVSSKILVDPKTGASKCAGFLRFTLPEEAARAIHEMNGKQVGSKRLFVTLAQKRA 199
Query: 289 EREQE--LKGQFEQA 301
+ + + FEQ+
Sbjct: 200 TTDPQGIIHPPFEQS 214
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 86/171 (50%), Gaps = 10/171 (5%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+ S++V L V+ L ++F +VG+V S V RD S G+G+VN+ +A RA+
Sbjct: 23 SCSVFVNGLSLEVSSETLKEVFGRVGRVASAVVMRD-HFGASRGFGFVNFTKADEADRAI 81
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGT--------GNIFIKNLDKSIDHKALHDTFSS 140
N P + + + + +K+G N+FI+ ++ I L F +
Sbjct: 82 QQFNKIPHCAGTWLVRKAEKRKPEQKAGQVSEQGLDLCNLFIRGVEPEISSIRLQSMFEA 141
Query: 141 FGNILSCKIATD-GSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFV 190
FG ++S KI D +G SK GF++F E A AI ++NG + K++FV
Sbjct: 142 FGKVVSSKILVDPKTGASKCAGFLRFTLPEEAARAIHEMNGKQVGSKRLFV 192
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 47/78 (60%), Gaps = 14/78 (17%)
Query: 513 TLLGESLYPLVEQLE--RDAAAKVTGMLLEMDQTEVLHLLESPEALKAK----------- 559
+++G+ L+ LV+ L+ +D+A K+TGMLLEM + E+LH+LE AL K
Sbjct: 420 SMMGDLLFTLVQGLQPAKDSA-KITGMLLEMTEPEILHILEDRAALIKKARHPSHSGICS 478
Query: 560 VAEAMEVLRSVAQQQANN 577
V EA+ VL++ ++A
Sbjct: 479 VDEALGVLKAAGYKEAKQ 496
>gi|452239|dbj|BAA05461.1| PES4 PAB-like protein [Saccharomyces cerevisiae]
Length = 555
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 112/386 (29%), Positives = 187/386 (48%), Gaps = 59/386 (15%)
Query: 32 LYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVL 91
L++GDL VT+ L +F + +S +VC D T++SLG+GY+N+ + +A +A++ L
Sbjct: 93 LFIGDLHETVTEETLKGIFKKYPSFVSAKVCIDSVTKKSLGHGYLNFEDKEEAEKAMEEL 152
Query: 92 NFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNL---DKSIDHKALHDTFSSFGNILSCK 148
N+T +N K IRIM S R+ + RK+ N+F NL + + + +DTFS +G ILSCK
Sbjct: 153 NYTKVNGKEIRIMPSLRNTTFRKNFGTNVFFSNLPLNNPLLTTRVFYDTFSRYGKILSCK 212
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER--------- 199
+ + K GFV FE++++A+N I N K++ G K+ R
Sbjct: 213 LDS-----RKDIGFVYFEDEKTARNVIKMYNNTSFFGKKILCGIHFDKEVRSVPNFETQK 267
Query: 200 -----ETVAIKTKF---------------------NNVFVKNLDESTTDEDLKKIFGEYG 233
ET+ K + N++F+KNL TT +D+ F E G
Sbjct: 268 SRLDAETIIEKEQSLNEKHSKGNDKESKNIYSSSQNSIFIKNLPTITTRDDILNFFSEVG 327
Query: 234 TITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQE 293
I S + + + + FV ++N+ D+ KA++ N F ++ V +AQ K ER +
Sbjct: 328 PIKS-IYLSNATKVKYLWAFVTYKNSSDSEKAIKRYNNFYFRGKKLLVTRAQDKEERAKF 386
Query: 294 LKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRD--PSGIS 351
++ Q + L+++NL + E LK L + I K+ D S
Sbjct: 387 IESQ------------KISTLFLENLSAVCNKEFLKYLCHQ-ENIRPFKIQIDGYDENSS 433
Query: 352 KGSGFVAFSTPEEASRALAEMNGKMI 377
SGF+ F E+A+R +N +++
Sbjct: 434 TYSGFIKFRNFEDATRIFNFLNNRLV 459
>gi|349577937|dbj|GAA23104.1| K7_Pes4p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 611
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/386 (28%), Positives = 187/386 (48%), Gaps = 59/386 (15%)
Query: 32 LYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVL 91
L++GDL VT+ L ++F + +S +VC D T++SLG+GY+N+ + +A +A++ L
Sbjct: 93 LFIGDLHETVTEETLKEIFKKYPSFVSAKVCLDSVTKKSLGHGYLNFEDKEEAEKAMEEL 152
Query: 92 NFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNL---DKSIDHKALHDTFSSFGNILSCK 148
N+T +N K IRIM S R+ + RK+ N+F NL + + + +DTFS +G ILSCK
Sbjct: 153 NYTKVNGKEIRIMPSLRNTTFRKNFGTNVFFSNLPLNNPLLTTRVFYDTFSRYGKILSCK 212
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER--------- 199
+ + K GFV FE++++A+N I N K++ G K+ R
Sbjct: 213 LDS-----RKDIGFVYFEDEKTARNVIKMYNNTSFFGKKILCGIHFDKEVRSVPNFETQK 267
Query: 200 -----ETVAIKTKF---------------------NNVFVKNLDESTTDEDLKKIFGEYG 233
ET+ K + N++F+KNL TT +D+ F E G
Sbjct: 268 SRLDAETIIEKEQSLNEKHSKGNDKESKNIYSSSQNSIFIKNLPTITTRDDILNFFSEVG 327
Query: 234 TITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQE 293
I S + + + + FV ++N+ D+ KA++ N F ++ V +AQ K ER +
Sbjct: 328 PIKS-IYLSNATKVKYLWAFVTYKNSSDSEKAIKRYNNFYFRGKKLLVTRAQDKEERAKF 386
Query: 294 LKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRD--PSGIS 351
++ Q + L+++NL + E LK L + I K+ D S
Sbjct: 387 IESQ------------KISTLFLENLSAVCNKEFLKYLCHQ-ENIRPFKIQIDGYDENSS 433
Query: 352 KGSGFVAFSTPEEASRALAEMNGKMI 377
SG + F E+A+R +N +++
Sbjct: 434 TYSGLIKFRNFEDATRIFNFLNNRLV 459
>gi|410730871|ref|XP_003980256.1| hypothetical protein NDAI_0G05970 [Naumovozyma dairenensis CBS 421]
gi|401780433|emb|CCK73580.1| hypothetical protein NDAI_0G05970 [Naumovozyma dairenensis CBS 421]
Length = 611
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 120/428 (28%), Positives = 193/428 (45%), Gaps = 64/428 (14%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
TT LY+G L +VT+ L++ F + S+++CRD T SLGYGY+N++N +A + +
Sbjct: 100 TTPLYIGGLSKDVTEETLFEAFEDYKTLASIKICRDSVTNESLGYGYLNFSNSVEATKLI 159
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNL---DKSIDHKALHDTFSSFGNIL 145
D N+T L I+IM S R+ RK+ N+F NL +K + + +DTF +G IL
Sbjct: 160 DDYNYTNLFGNEIKIMPSMRNTLYRKNIGTNVFFSNLPLENKQLTTRKFYDTFKKYGEIL 219
Query: 146 SCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNG------------------------- 180
SCK+ + K GFV FEN ++A AI N
Sbjct: 220 SCKLDS-----RKNIGFVYFENDKAALQAIKDYNNKVFFGNKIICGIHFDKEIRTFPDFD 274
Query: 181 ---------MLINDKQVFVGHFLR-KQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFG 230
++I D+ G FL+ KQE + + N VF+KNL +T D+++ F
Sbjct: 275 KRKSYLDSQLIIEDELEAGGEFLKFKQEPKCIVPHP--NAVFIKNLPMTTNDDEILDFFS 332
Query: 231 EYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSER 290
+ G + S + S + FV ++ + D A++ L+ F DR V KA+ K
Sbjct: 333 KIGPVKSVFASQVLKYNS-LWAFVTYKKSSDTELAIQKLDQTYFKDRAISVTKAKSK--- 388
Query: 291 EQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSG- 349
K F+ K+TV Y+KNL I +E+ E I K+ DP
Sbjct: 389 ----KTNFKIHDKKTV--------YLKNLS-PICNERFIERICLQERIRVQKISVDPISP 435
Query: 350 -ISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVA 408
I +GFV T +A++ M+ ++I + V+ R ++ ++ + +
Sbjct: 436 DILTNTGFVTCKTEVDANKLFNFMDKRLIGGCSVQVSWQNDNPVERLKIPEKYYKSQCWL 495
Query: 409 MGPSVPPR 416
P P+
Sbjct: 496 TSPKFNPK 503
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 82/194 (42%), Gaps = 25/194 (12%)
Query: 204 IKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENADDA 262
IK K +++ L + T+E L + F +Y T+ S + RD +S +G++NF N+ +A
Sbjct: 96 IKPKTTPLYIGGLSKDVTEETLFEAFEDYKTLASIKICRDSVTNESLGYGYLNFSNSVEA 155
Query: 263 AKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL--- 319
K ++ N E + + + + + + G N++ NL
Sbjct: 156 TKLIDDYNYTNLFGNEIKIMPSMRNTLYRKNI----------------GTNVFFSNLPLE 199
Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
+ K + F ++G I SCK+ K GFV F + A +A+ + N K+
Sbjct: 200 NKQLTTRKFYDTFKKYGEILSCKL-----DSRKNIGFVYFENDKAALQAIKDYNNKVFFG 254
Query: 380 KPLYVAVAQRKEER 393
+ + KE R
Sbjct: 255 NKIICGIHFDKEIR 268
>gi|426228299|ref|XP_004008250.1| PREDICTED: polyadenylate-binding protein 1-like [Ovis aries]
Length = 551
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 83/203 (40%), Positives = 116/203 (57%), Gaps = 34/203 (16%)
Query: 248 SKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVD 307
SK +GFV+FE + A +A+E +NG +DR+ +VG+ + + ERE EL + ++
Sbjct: 91 SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFT----- 145
Query: 308 KFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAF-------- 359
N+YIKN G+ +DDE+LK+LF +FG S KVM D SG SKG GFV+F
Sbjct: 146 -----NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQK 200
Query: 360 ----------------STPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQ 403
S+PEEA++A+ EMNG+++ +KPLYVA+AQRKEER+A L Q+ Q
Sbjct: 201 VMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQ 260
Query: 404 MRPVAMGPSVPPRMPMYPPGPSG 426
P P P PSG
Sbjct: 261 RMASVRAVPNPVINPYQPAPPSG 283
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/172 (42%), Positives = 98/172 (56%), Gaps = 26/172 (15%)
Query: 157 SKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTKFNNVFVK 214
SKG+GFV FE +E+A+ AI+K+NGML+ND++VFVG F ++ERE A +F NV++K
Sbjct: 91 SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIK 150
Query: 215 NLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADD------------- 261
N E DE LK +FG++G S VM D GKSK FGFV+FE +D
Sbjct: 151 NFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKVMMEGGRSKG 210
Query: 262 -----------AAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAM 302
A KAV +NG+ + YV AQ+K ER+ L Q+ Q M
Sbjct: 211 FGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRM 262
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 83/169 (49%), Gaps = 32/169 (18%)
Query: 64 DLSTRR--SLGYGYVNYANPADAARALDVLNFTPLNNKSIRI----MYSHRDPSI--RKS 115
DL ++ S GYG+V++ A RA++ +N LN++ + + R+ + R
Sbjct: 83 DLPNKKNGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAK 142
Query: 116 GTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQ--- 172
N++IKN + +D + L D F FG LS K+ TD SG+SKGFGFV FE E AQ
Sbjct: 143 EFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKVM 202
Query: 173 ---------------------NAIDKLNGMLINDKQVFVGHFLRKQERE 200
A+ ++NG ++ K ++V RK+ER+
Sbjct: 203 MEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQ 251
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 49/65 (75%), Gaps = 3/65 (4%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA+A P++Q+ +LGE L+PL++ + A K+TGMLLE+D E LH+LE PE
Sbjct: 420 PLTA--SMLASAPPQEQKQMLGEGLFPLIQAMHPTLAGKITGMLLEIDNLE-LHMLEPPE 476
Query: 555 ALKAK 559
+L++K
Sbjct: 477 SLRSK 481
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 52/111 (46%), Gaps = 25/111 (22%)
Query: 21 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTR------------ 68
GA +F T++Y+ + ++ D +L DLF + G LSV+V D S +
Sbjct: 138 GARAKEF--TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERH 195
Query: 69 -----------RSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHR 108
RS G+G+V +++P +A +A+ +N + K + + + R
Sbjct: 196 EDAQKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 246
>gi|165940926|gb|ABY75308.1| cytoplasmic 1 polyA binding protein [Ovis aries]
Length = 305
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 67/114 (58%), Positives = 91/114 (79%), Gaps = 1/114 (0%)
Query: 290 REQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSG 349
R+ ELK +FEQ ++ + ++QG+NLY+KNL D IDDE+L++ FS FGTITS KVM + G
Sbjct: 1 RQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME-GG 59
Query: 350 ISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQ 403
SKG GFV FS+PEEA++A+ EMNG+++ +KPLYVA+AQRKEER+A L Q+ Q
Sbjct: 60 RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQ 113
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 61/93 (65%), Gaps = 1/93 (1%)
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEAL 269
N++VKNLD+ DE L+K F +GTITSA VM +G G+SK FGFV F + ++A KAV +
Sbjct: 24 NLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTEM 82
Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAM 302
NG+ + YV AQ+K ER+ L Q+ Q M
Sbjct: 83 NGRIVATKPLYVALAQRKEERQAHLTNQYMQRM 115
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKL 178
N+++KNLD ID + L FS FG I S K+ +G G+SKGFGFV F + E A A+ ++
Sbjct: 24 NLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTEM 82
Query: 179 NGMLINDKQVFVGHFLRKQERE 200
NG ++ K ++V RK+ER+
Sbjct: 83 NGRIVATKPLYVALAQRKEERQ 104
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
+LYV +LD + D +L FS G + S +V + RS G+G+V +++P +A +A+
Sbjct: 24 NLYVKNLDDGIDDERLRKEFSPFGTITSAKVM--MEGGRSKGFGFVCFSSPEEATKAVTE 81
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNL 125
+N + K + + + R R++ N +++ +
Sbjct: 82 MNGRIVATKPLYVALAQRK-EERQAHLTNQYMQRM 115
>gi|298712686|emb|CBJ48711.1| polyadenylate-binding protein, putative [Ectocarpus siliculosus]
Length = 80
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 68/80 (85%), Positives = 73/80 (91%)
Query: 241 MRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQ 300
MRD DGKSKCFGFVNFENADDAAKAVEALNGKK DD+EWYVGKAQKKSERE ELK +FEQ
Sbjct: 1 MRDMDGKSKCFGFVNFENADDAAKAVEALNGKKVDDKEWYVGKAQKKSERENELKLRFEQ 60
Query: 301 AMKETVDKFQGLNLYIKNLG 320
+MKET DK+QG NLY+KN G
Sbjct: 61 SMKETADKYQGANLYVKNFG 80
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 344 MRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQ 403
MRD G SK GFV F ++A++A+ +NGK + K YV AQ+K ER L+ +F Q
Sbjct: 1 MRDMDGKSKCFGFVNFENADDAAKAVEALNGKKVDDKEWYVGKAQKKSERENELKLRFEQ 60
Query: 404 -MRPVA 408
M+ A
Sbjct: 61 SMKETA 66
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 14/78 (17%)
Query: 152 DGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFN-- 209
D G+SK FGFV FEN + A A++ LNG ++DK+ +VG +K ERE +K +F
Sbjct: 3 DMDGKSKCFGFVNFENADDAAKAVEALNGKKVDDKEWYVGKAQKKSEREN-ELKLRFEQS 61
Query: 210 -----------NVFVKNL 216
N++VKN
Sbjct: 62 MKETADKYQGANLYVKNF 79
>gi|123446312|ref|XP_001311908.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121893735|gb|EAX98978.1| hypothetical protein TVAG_431870 [Trichomonas vaginalis G3]
Length = 574
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/278 (33%), Positives = 152/278 (54%), Gaps = 19/278 (6%)
Query: 32 LYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVL 91
++V +L VT L LFS+ G V++V L + + Y +V++ +A A+
Sbjct: 16 IHVANLPPTVTVEFLKSLFSEAGTVINVI----LKQKPTSCYAFVDFTLQEEAETAVRDF 71
Query: 92 NFTPLNNKSIRIMYSHRDPSIR--KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKI 149
N+T LN ++I I+ P + SG GN+FIK LD+SID LH+ F+++G I+SC+I
Sbjct: 72 NYTKLNGETI-IVTRTTAPVVSAISSGQGNLFIKGLDESIDCLQLHELFANYGEIVSCRI 130
Query: 150 ATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVA-----I 204
T +GQ +GFG+VQF +E A++A+ +L +N K + +G FL++ ER A +
Sbjct: 131 PT-LNGQPRGFGYVQFLKQEDAEHAMKELADSTVNGKPIQIGPFLKRSERPLSAAFQNNL 189
Query: 205 KTKFNNVFVKNL-DESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAA 263
+ F NVFVKNL D T L ++F E+G +TSA ++ + + G+V + A
Sbjct: 190 DSSFTNVFVKNLPDNINTLLSLLRLFHEFGDVTSARIVPE-----RHIGYVMMSEHEAAV 244
Query: 264 KAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQA 301
+AV L G+ + V ++ +ER +K E+
Sbjct: 245 RAVVGLCGRTIFGKRLSVCRSLSPAERANFIKKPIEEV 282
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 128/275 (46%), Gaps = 20/275 (7%)
Query: 120 IFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLN 179
I + NL ++ + L FS G +++ + + + FV F +E A+ A+ N
Sbjct: 16 IHVANLPPTVTVEFLKSLFSEAGTVINVILKQKPTS---CYAFVDFTLQEEAETAVRDFN 72
Query: 180 GMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAV 239
+N + + V R AI + N+F+K LDES L ++F YG I S
Sbjct: 73 YTKLNGETIIV---TRTTAPVVSAISSGQGNLFIKGLDESIDCLQLHELFANYGEIVSCR 129
Query: 240 VMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFE 299
+ +G+ + FG+V F +DA A++ L + + +G K+SER L F+
Sbjct: 130 I-PTLNGQPRGFGYVQFLKQEDAEHAMKELADSTVNGKPIQIGPFLKRSERP--LSAAFQ 186
Query: 300 QAMKETVDKFQGLNLYIKNLGDSIDDE-KLKELFSEFGTITSCKVMRDPSGISKGSGFVA 358
+ + N+++KNL D+I+ L LF EFG +TS +++ + + G+V
Sbjct: 187 NNLDSSF-----TNVFVKNLPDNINTLLSLLRLFHEFGDVTSARIVPE-----RHIGYVM 236
Query: 359 FSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEER 393
S E A RA+ + G+ I K L V + ER
Sbjct: 237 MSEHEAAVRAVVGLCGRTIFGKRLSVCRSLSPAER 271
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 91/192 (47%), Gaps = 19/192 (9%)
Query: 202 VAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADD 261
V + K N + V NL + T E LK +F E GT+ + ++ + + C+ FV+F ++
Sbjct: 7 VRFEPKENGIHVANLPPTVTVEFLKSLFSEAGTVINVILKQK---PTSCYAFVDFTLQEE 63
Query: 262 AAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGD 321
A AV N K + V + + + QG NL+IK L +
Sbjct: 64 AETAVRDFNYTKLNGETIIVTRTTA--------------PVVSAISSGQG-NLFIKGLDE 108
Query: 322 SIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKP 381
SID +L ELF+ +G I SC++ +G +G G+V F E+A A+ E+ + KP
Sbjct: 109 SIDCLQLHELFANYGEIVSCRIPTL-NGQPRGFGYVQFLKQEDAEHAMKELADSTVNGKP 167
Query: 382 LYVAVAQRKEER 393
+ + ++ ER
Sbjct: 168 IQIGPFLKRSER 179
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 85/179 (47%), Gaps = 17/179 (9%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
+L++ LD ++ QL++LF+ G+++S R+ R G+GYV + DA A+
Sbjct: 100 NLFIKGLDESIDCLQLHELFANYGEIVSCRIPTLNGQPR--GFGYVQFLKQEDAEHAMKE 157
Query: 91 LNFTPLNNKSIRI----MYSHRDPSIR-----KSGTGNIFIKNLDKSIDH-KALHDTFSS 140
L + +N K I+I S R S S N+F+KNL +I+ +L F
Sbjct: 158 LADSTVNGKPIQIGPFLKRSERPLSAAFQNNLDSSFTNVFVKNLPDNINTLLSLLRLFHE 217
Query: 141 FGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER 199
FG++ S +I + + G+V E+A A+ L G I K++ V L ER
Sbjct: 218 FGDVTSARIVPE-----RHIGYVMMSEHEAAVRAVVGLCGRTIFGKRLSVCRSLSPAER 271
>gi|324525699|gb|ADY48582.1| Polyadenylate-binding protein 1, partial [Ascaris suum]
Length = 121
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/102 (66%), Positives = 81/102 (79%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVGDL +VT++ L++ FS G VLS+RVCRD TRRSLGY YVN+ PADA RALD
Sbjct: 20 SLYVGDLHPDVTEAMLFEKFSSAGPVLSIRVCRDAITRRSLGYAYVNFQQPADAERALDT 79
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHK 132
+NF + K IRIM+S RDPS+R+SG GNIFIKNLDKSID+K
Sbjct: 80 MNFDVMYGKPIRIMWSQRDPSMRRSGAGNIFIKNLDKSIDNK 121
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 57/107 (53%), Gaps = 5/107 (4%)
Query: 118 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAID 176
++++ +L + L + FSS G +LS ++ D + +S G+ +V F+ A+ A+D
Sbjct: 19 ASLYVGDLHPDVTEAMLFEKFSSAGPVLSIRVCRDAITRRSLGYAYVNFQQPADAERALD 78
Query: 177 KLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDE 223
+N ++ K + + +R+ ++ N+F+KNLD+S ++
Sbjct: 79 TMNFDVMYGKPIRIMW----SQRDPSMRRSGAGNIFIKNLDKSIDNK 121
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 313 NLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP-SGISKGSGFVAFSTPEEASRALAE 371
+LY+ +L + + L E FS G + S +V RD + S G +V F P +A RAL
Sbjct: 20 SLYVGDLHPDVTEAMLFEKFSSAGPVLSIRVCRDAITRRSLGYAYVNFQQPADAERALDT 79
Query: 372 MNGKMIVSKPLYVAVAQRKEERR 394
MN ++ KP+ + +QR R
Sbjct: 80 MNFDVMYGKPIRIMWSQRDPSMR 102
>gi|297733643|emb|CBI14890.3| unnamed protein product [Vitis vinifera]
Length = 357
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/77 (87%), Positives = 70/77 (90%)
Query: 79 ANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTF 138
+NP DAARALDVLNFTPLN K +RIMYSHRDPSIRKSGT NIFIKNLDK IDHKALHDTF
Sbjct: 274 SNPQDAARALDVLNFTPLNGKPLRIMYSHRDPSIRKSGTENIFIKNLDKGIDHKALHDTF 333
Query: 139 SSFGNILSCKIATDGSG 155
S+FGNILSCK ATD SG
Sbjct: 334 SAFGNILSCKEATDASG 350
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 16/93 (17%)
Query: 258 NADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIK 317
N DAA+A++ LN + + + + + ++ K N++IK
Sbjct: 275 NPQDAARALDVLNFTPLNGKPLRIMYSHRDP----------------SIRKSGTENIFIK 318
Query: 318 NLGDSIDDEKLKELFSEFGTITSCKVMRDPSGI 350
NL ID + L + FS FG I SCK D SG+
Sbjct: 319 NLDKGIDHKALHDTFSAFGNILSCKEATDASGM 351
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 4/84 (4%)
Query: 167 NKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLK 226
N + A A+D LN +N K + + + R+ K+ N+F+KNLD+ + L
Sbjct: 275 NPQDAARALDVLNFTPLNGKPLRIMY----SHRDPSIRKSGTENIFIKNLDKGIDHKALH 330
Query: 227 KIFGEYGTITSAVVMRDGDGKSKC 250
F +G I S D G C
Sbjct: 331 DTFSAFGNILSCKEATDASGMQGC 354
>gi|367013040|ref|XP_003681020.1| hypothetical protein TDEL_0D02250 [Torulaspora delbrueckii]
gi|359748680|emb|CCE91809.1| hypothetical protein TDEL_0D02250 [Torulaspora delbrueckii]
Length = 622
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/387 (27%), Positives = 174/387 (44%), Gaps = 54/387 (13%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+L++GDL+ +VT++ L D+F + + SV++C D ++ +SLGYGY+N+AN DA +A
Sbjct: 96 VVALFIGDLEPSVTENMLRDIFGKFRSLTSVKICLDSNSGKSLGYGYLNFANSEDAEKAT 155
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNL---DKSIDHKALHDTFSSFGNIL 145
+ N+ P+ + +RIM S R+ RK+ N+F NL D + + +DTF +G IL
Sbjct: 156 EEFNYRPIEGQEVRIMPSLRNSFYRKNVGTNVFFSNLPLEDSRLTTRVFYDTFKKYGKIL 215
Query: 146 SCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIK 205
SCK+ + K GF+ F N +SA+ I NG +V G K R+ +
Sbjct: 216 SCKL-----DKRKDIGFIYFNNDQSARKVIKDYNGKEFFGNKVLCGIHFDKDFRKYPEFE 270
Query: 206 TKFNN----------------------------------VFVKNLDESTTDEDLKKIFGE 231
+ +N VFVKNL T+E++ F
Sbjct: 271 KRISNLDSITVAMEELTTEDSNKVVLQRDSGSQVPHPNAVFVKNLPMDCTNEEILDFFSN 330
Query: 232 YGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSERE 291
G + S + S + FV ++ D +K+++ N K+F +R V KA K +
Sbjct: 331 IGPVKSVFSSKAPKFNS-LWAFVTYKRGSDTSKSIQFYNDKEFKNRRLIVSKAVPKEGKN 389
Query: 292 QELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKEL-FSEFGTITSCKVMRDPSGI 350
Q + K V I ++ +++E L +L E I +
Sbjct: 390 QSPSNY--KNYKTIVQ--------IDDVSPVLNEEFLSQLCIQERIKINKLHITSFNEKT 439
Query: 351 SKGSGFVAFSTPEEASRALAEMNGKMI 377
SGF+ T +A+R A +N ++I
Sbjct: 440 LTYSGFIKCKTKNDATRVFASLNNRLI 466
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 93/190 (48%), Gaps = 29/190 (15%)
Query: 211 VFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGD-GKSKCFGFVNFENADDAAKAVEAL 269
+F+ +L+ S T+ L+ IFG++ ++TS + D + GKS +G++NF N++DA KA E
Sbjct: 99 LFIGDLEPSVTENMLRDIFGKFRSLTSVKICLDSNSGKSLGYGYLNFANSEDAEKATEEF 158
Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLK 329
N + + +E + + + S + + G N++ NL ++D +L
Sbjct: 159 NYRPIEGQEVRIMPSLRNSFYRKNV----------------GTNVFFSNL--PLEDSRLT 200
Query: 330 -----ELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYV 384
+ F ++G I SCK+ + K GF+ F+ + A + + + NGK +
Sbjct: 201 TRVFYDTFKKYGKILSCKLDK-----RKDIGFIYFNNDQSARKVIKDYNGKEFFGNKVLC 255
Query: 385 AVAQRKEERR 394
+ K+ R+
Sbjct: 256 GIHFDKDFRK 265
>gi|328851168|gb|EGG00325.1| hypothetical protein MELLADRAFT_28015 [Melampsora larici-populina
98AG31]
Length = 223
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/228 (39%), Positives = 122/228 (53%), Gaps = 14/228 (6%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
SLYVG+L +V L ++FSQ V++ RVC D T++ GYGYV+YA P +A AL
Sbjct: 1 SLYVGNLTDDVNVQDLLNIFSQASPVINARVCIDRITQKPRGYGYVSYATPEEADLALRE 60
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
N L K IR+M S+ N+FIKNL KS LHD+F FG ILS KI+
Sbjct: 61 FNHINLKGKPIRVMRSYSGKPKEFPSEANLFIKNLPKSFTPINLHDSFERFGKILSSKIS 120
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLI---------NDKQVFVGHFLRKQERET 201
D G SKG+G++QFEN + + AI N N K++ V +++ ++R
Sbjct: 121 FDQLGNSKGYGYIQFENPKDSNEAILNSNDFQFDIKDEEESKNMKKLKVTSYVKPEDR-- 178
Query: 202 VAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSK 249
K KF NVF +NL T+E K E+G ITS ++ K+K
Sbjct: 179 ---KPKFTNVFFRNLPLDFTEESFSKYASEFGKITSLILNPINKSKAK 223
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 108/223 (48%), Gaps = 13/223 (5%)
Query: 120 IFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQS-KGFGFVQFENKESAQNAIDKL 178
+++ NL ++ + L + FS +++ ++ D Q +G+G+V + E A A+ +
Sbjct: 2 LYVGNLTDDVNVQDLLNIFSQASPVINARVCIDRITQKPRGYGYVSYATPEEADLALREF 61
Query: 179 NGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSA 238
N + + K + V + +E + N+F+KNL +S T +L F +G I S+
Sbjct: 62 NHINLKGKPIRVMRSYSGKPKEFPSEA----NLFIKNLPKSFTPINLHDSFERFGKILSS 117
Query: 239 VVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQF 298
+ D G SK +G++ FEN D+ +A+ N +FD ++ K KK + +K +
Sbjct: 118 KISFDQLGNSKGYGYIQFENPKDSNEAILNSNDFQFDIKDEEESKNMKKLKVTSYVKPE- 176
Query: 299 EQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSC 341
+ KF N++ +NL +E + SEFG ITS
Sbjct: 177 -----DRKPKFT--NVFFRNLPLDFTEESFSKYASEFGKITSL 212
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 74/168 (44%), Gaps = 25/168 (14%)
Query: 211 VFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENADDAAKAVEAL 269
++V NL + +DL IF + + +A V D K + +G+V++ ++A A+
Sbjct: 2 LYVGNLTDDVNVQDLLNIFSQASPVINARVCIDRITQKPRGYGYVSYATPEEADLALREF 61
Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGL----NLYIKNLGDSIDD 325
N LKG+ + M+ K + NL+IKNL S
Sbjct: 62 N--------------------HINLKGKPIRVMRSYSGKPKEFPSEANLFIKNLPKSFTP 101
Query: 326 EKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMN 373
L + F FG I S K+ D G SKG G++ F P++++ A+ N
Sbjct: 102 INLHDSFERFGKILSSKISFDQLGNSKGYGYIQFENPKDSNEAILNSN 149
Score = 45.4 bits (106), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 314 LYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP-SGISKGSGFVAFSTPEEASRALAEM 372
LY+ NL D ++ + L +FS+ + + +V D + +G G+V+++TPEEA AL E
Sbjct: 2 LYVGNLTDDVNVQDLLNIFSQASPVINARVCIDRITQKPRGYGYVSYATPEEADLALREF 61
Query: 373 NGKMIVSKPLYV 384
N + KP+ V
Sbjct: 62 NHINLKGKPIRV 73
>gi|49658982|emb|CAE01482.1| HUR [Tetraodon nigroviridis]
Length = 325
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 148/296 (50%), Gaps = 50/296 (16%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
T+L V L N++ +L LFS +G+V S ++ RD SLGYG+VNY NP+DA RA+
Sbjct: 19 TNLIVNYLPQNMSQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVNPSDAERAIS 78
Query: 90 VLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKI 149
LN L +K+I++ Y+ PS N++I L KS+ K + D FS FG I++ ++
Sbjct: 79 TLNGLRLQSKNIKVSYAR--PSSDTIKDANLYISGLPKSMTQKDVEDMFSQFGRIINSRV 136
Query: 150 ATD-GSGQSKGFGFVQFENKESAQNAIDKLNG---------------------------- 180
D +G S+G F++F+ + A++AI+ LNG
Sbjct: 137 LVDQATGVSRGVAFIRFDKRAEAEDAINNLNGQKPSEAIEPITVKFAANPNQTKNTQVIS 196
Query: 181 -MLINDKQVFVGHFLRKQER--------------ETVAIKTKFNN---VFVKNLDESTTD 222
+ N + F G + +R V++ T NN +F+ NL + +
Sbjct: 197 QLFHNQSRRFGGPLHHQAQRFRFSPMGVDHMGGVGGVSVPTSSNNGWCIFIYNLGQEADE 256
Query: 223 EDLKKIFGEYGTITSAVVMRD-GDGKSKCFGFVNFENADDAAKAVEALNGKKFDDR 277
L ++FG +G +T+ V+RD K K FGFV N +DAA A+ +LNG + D+
Sbjct: 257 TILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMSNYEDAAMAIASLNGYRLGDK 312
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 143/317 (45%), Gaps = 43/317 (13%)
Query: 114 KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQ 172
K N+ + L +++ + L FSS G + S K+ D +G S G+GFV + N A+
Sbjct: 15 KDAKTNLIVNYLPQNMSQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVNPSDAE 74
Query: 173 NAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEY 232
AI LNG+ + K + V + + +T+ K N+++ L +S T +D++ +F ++
Sbjct: 75 RAISTLNGLRLQSKNIKVSY--ARPSSDTI----KDANLYISGLPKSMTQKDVEDMFSQF 128
Query: 233 GTITSAVVMRD-GDGKSKCFGFVNFENADDAAKAVEALNGK-----------KFDDREWY 280
G I ++ V+ D G S+ F+ F+ +A A+ LNG+ KF
Sbjct: 129 GRIINSRVLVDQATGVSRGVAFIRFDKRAEAEDAINNLNGQKPSEAIEPITVKFAANPNQ 188
Query: 281 VGKAQKKSEREQELKGQFEQAMKETVDKFQ-----------------------GLNLYIK 317
Q S+ +F + +F+ G ++I
Sbjct: 189 TKNTQVISQLFHNQSRRFGGPLHHQAQRFRFSPMGVDHMGGVGGVSVPTSSNNGWCIFIY 248
Query: 318 NLGDSIDDEKLKELFSEFGTITSCKVMRD-PSGISKGSGFVAFSTPEEASRALAEMNGKM 376
NLG D+ L ++F FG +T+ KV+RD + KG GFV S E+A+ A+A +NG
Sbjct: 249 NLGQEADETILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMSNYEDAAMAIASLNGYR 308
Query: 377 IVSKPLYVAVAQRKEER 393
+ K L V+ K +
Sbjct: 309 LGDKILQVSFKTSKGHK 325
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 13/111 (11%)
Query: 6 VQHQAQ-----------MSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVG 54
+ HQAQ M G GV+ S N +Y +L ++ L+ +F G
Sbjct: 210 LHHQAQRFRFSPMGVDHMGGVGGVSVPTSSNNGWCIFIY--NLGQEADETILWQMFGPFG 267
Query: 55 QVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMY 105
V +V+V RD +T + G+G+V +N DAA A+ LN L +K +++ +
Sbjct: 268 AVTNVKVIRDFNTNKCKGFGFVTMSNYEDAAMAIASLNGYRLGDKILQVSF 318
>gi|331224641|ref|XP_003324992.1| hypothetical protein PGTG_06529 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309303982|gb|EFP80573.1| hypothetical protein PGTG_06529 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 306
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 145/299 (48%), Gaps = 27/299 (9%)
Query: 12 MSGPNGVAAGASGNQFLTT---------SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRV- 61
MS P V + AS S+YVGDL +T+ QL +FSQ V +R+
Sbjct: 1 MSNPTSVESTASAPLPPQPLSQPTPAEYSVYVGDLPPEITEEQLTQVFSQASPVEKIRIK 60
Query: 62 CRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTG--- 118
+TR Y YV Y++ A A+ N T K R+M SI + G
Sbjct: 61 LPKRNTRFRRAYAYVTYSSADAATAAIREFNQTEFLGKPCRVM-----KSIHGAAKGLSE 115
Query: 119 -NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDK 177
N+F+K+L + A HDTF+ FG +LS K+A D KG+GFVQ+ E AQ AI +
Sbjct: 116 ANVFVKHLPAKLSAIAFHDTFADFGEVLSSKLAIDHLNVPKGYGFVQYATAEQAQKAIRE 175
Query: 178 LNGMLIN----DKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYG 233
NG ++ K + F++K+ R + +F NVF +NL T E K+ + +YG
Sbjct: 176 TNGSTLDVEGATKPIKTSLFIKKENR---IVSREFKNVFFRNLSTKITLEKFKQTWSKYG 232
Query: 234 TITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQ 292
ITSA + DGK GF NFE AAK V+ KK R V +A +SERE+
Sbjct: 233 VITSAFLSLGKDGKPTGTGFANFEKPSAAAKVVKVTQKKKAPGRVHAV-RALTRSERER 290
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 109/251 (43%), Gaps = 20/251 (7%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNI--LSCKIATDGSGQSKGFGFVQFENKESAQNAID 176
++++ +L I + L FS + + K+ + + + +V + + ++A AI
Sbjct: 29 SVYVGDLPPEITEEQLTQVFSQASPVEKIRIKLPKRNTRFRRAYAYVTYSSADAATAAIR 88
Query: 177 KLNGMLINDKQVFVGHFLRKQERETVAIK-TKFNNVFVKNLDESTTDEDLKKIFGEYGTI 235
+ N + F+G R + A K NVFVK+L + F ++G +
Sbjct: 89 EFN------QTEFLGKPCRVMKSIHGAAKGLSEANVFVKHLPAKLSAIAFHDTFADFGEV 142
Query: 236 TSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELK 295
S+ + D K +GFV + A+ A KA+ NG D V A K + +K
Sbjct: 143 LSSKLAIDHLNVPKGYGFVQYATAEQAQKAIRETNGSTLD-----VEGATKPIKTSLFIK 197
Query: 296 GQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSG 355
+ +E F+ N++ +NL I EK K+ +S++G ITS + G G+G
Sbjct: 198 KENRIVSRE----FK--NVFFRNLSTKITLEKFKQTWSKYGVITSAFLSLGKDGKPTGTG 251
Query: 356 FVAFSTPEEAS 366
F F P A+
Sbjct: 252 FANFEKPSAAA 262
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 87/193 (45%), Gaps = 29/193 (15%)
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVM--RDGDGKSKCFGFVNFENADDAAKAVE 267
+V+V +L T+E L ++F + + + + + + +V + +AD A A+
Sbjct: 29 SVYVGDLPPEITEEQLTQVFSQASPVEKIRIKLPKRNTRFRRAYAYVTYSSADAATAAIR 88
Query: 268 ALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGL---NLYIKNLGDSID 324
N + E G+ + MK +GL N+++K+L +
Sbjct: 89 EFN--------------------QTEFLGKPCRVMKSIHGAAKGLSEANVFVKHLPAKLS 128
Query: 325 DEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMI----VSK 380
+ F++FG + S K+ D + KG GFV ++T E+A +A+ E NG + +K
Sbjct: 129 AIAFHDTFADFGEVLSSKLAIDHLNVPKGYGFVQYATAEQAQKAIRETNGSTLDVEGATK 188
Query: 381 PLYVAVAQRKEER 393
P+ ++ +KE R
Sbjct: 189 PIKTSLFIKKENR 201
>gi|302142289|emb|CBI19492.3| unnamed protein product [Vitis vinifera]
Length = 153
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 68/89 (76%), Positives = 82/89 (92%)
Query: 493 PMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLES 552
PMPI+ L++ALANA+P+QQRT+L ESLYPLV+QLE + AAK+TGMLLEM QTE LHLLES
Sbjct: 53 PMPISTLASALANATPDQQRTMLSESLYPLVDQLEHEMAAKLTGMLLEMGQTEFLHLLES 112
Query: 553 PEALKAKVAEAMEVLRSVAQQQANNPADQ 581
PEALK+KVAEAM+VLR+VAQQQAN+P +Q
Sbjct: 113 PEALKSKVAEAMDVLRNVAQQQANSPTEQ 141
>gi|401625916|gb|EJS43897.1| pes4p [Saccharomyces arboricola H-6]
Length = 611
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 105/386 (27%), Positives = 187/386 (48%), Gaps = 59/386 (15%)
Query: 32 LYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVL 91
L++GDL VT+ L ++F + +S +VC D T++SLG+GY+N+ + +A +A++ L
Sbjct: 93 LFIGDLHETVTEETLKEIFGKFPSFVSAKVCLDSVTKKSLGHGYLNFDDKEEAEKAMEEL 152
Query: 92 NFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNL---DKSIDHKALHDTFSSFGNILSCK 148
N+T +N K +RIM S R+ + RK+ N+F NL + + + +DTFS +G ILSCK
Sbjct: 153 NYTEINGKEVRIMPSLRNTTFRKNFGTNVFFSNLPLNNPLLTTRVFYDTFSRYGKILSCK 212
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER--------- 199
+ + K GFV FE++++A+N I N K++ G K+ R
Sbjct: 213 LDS-----RKDIGFVYFEDEKTARNVIKMYNNTSFFGKKILCGIHFDKEVRSVPNFETQK 267
Query: 200 -----ETVA---------------------IKTKFNNVFVKNLDESTTDEDLKKIFGEYG 233
ET+ + + N++F+KNL TT +D+ F E G
Sbjct: 268 SRLDSETIIEKEQALNDKKVQRNDGDSKNNLSSSQNSIFIKNLPTITTRDDILNFFSEVG 327
Query: 234 TITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQE 293
I S + + + F+ +++ +D+ +A++ N F ++ V +AQ K ER +
Sbjct: 328 PIKS-IYLSTATKVKYLWAFITYKSGEDSERAIKRYNNFYFRGKKLLVARAQDKEERAKF 386
Query: 294 LKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRD--PSGIS 351
++ Q + L+++NL + E LK L + I K+ D +
Sbjct: 387 IESQ------------KISTLFLENLSAVCNKEFLKYLCHQ-ENIRPFKIQMDGYNENSA 433
Query: 352 KGSGFVAFSTPEEASRALAEMNGKMI 377
SG++ F E+A+R +N +++
Sbjct: 434 TYSGYIKFKNFEDATRIFNFLNNRLV 459
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 132/308 (42%), Gaps = 37/308 (12%)
Query: 120 IFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKL 178
+FI +L +++ + L + F F + +S K+ D + +S G G++ F++KE A+ A+++L
Sbjct: 93 LFIGDLHETVTEETLKEIFGKFPSFVSAKVCLDSVTKKSLGHGYLNFDDKEEAEKAMEEL 152
Query: 179 NGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNL---DESTTDEDLKKIFGEYGTI 235
N IN K+V + LR T K NVF NL + T F YG I
Sbjct: 153 NYTEINGKEVRIMPSLR----NTTFRKNFGTNVFFSNLPLNNPLLTTRVFYDTFSRYGKI 208
Query: 236 TSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQ-EL 294
S + D GFV FE+ A ++ N F ++ G K R
Sbjct: 209 LSCKLDSRKD-----IGFVYFEDEKTARNVIKMYNNTSFFGKKILCGIHFDKEVRSVPNF 263
Query: 295 KGQFEQAMKETV-DKFQGLN---------------------LYIKNLGDSIDDEKLKELF 332
+ Q + ET+ +K Q LN ++IKNL + + F
Sbjct: 264 ETQKSRLDSETIIEKEQALNDKKVQRNDGDSKNNLSSSQNSIFIKNLPTITTRDDILNFF 323
Query: 333 SEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEE 392
SE G I S + + + F+ + + E++ RA+ N K L VA AQ KEE
Sbjct: 324 SEVGPIKSI-YLSTATKVKYLWAFITYKSGEDSERAIKRYNNFYFRGKKLLVARAQDKEE 382
Query: 393 RRARLQAQ 400
R +++Q
Sbjct: 383 RAKFIESQ 390
Score = 38.9 bits (89), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 70/159 (44%), Gaps = 9/159 (5%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
S+++ +L T + + FS+VG + S+ + +T+ + ++ Y + D+ RA+
Sbjct: 304 SIFIKNLPTITTRDDILNFFSEVGPIKSIYLS--TATKVKYLWAFITYKSGEDSERAIKR 361
Query: 91 LNFTPLNNKSIRIMYSH----RDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
N K + + + R I +F++NL ++ +K NI
Sbjct: 362 YNNFYFRGKKLLVARAQDKEERAKFIESQKISTLFLENLS-AVCNKEFLKYLCHQENIRP 420
Query: 147 CKIATDGSGQSKGF--GFVQFENKESAQNAIDKLNGMLI 183
KI DG ++ G+++F+N E A + LN L+
Sbjct: 421 FKIQMDGYNENSATYSGYIKFKNFEDATRIFNFLNNRLV 459
>gi|403164939|ref|XP_003324991.2| hypothetical protein PGTG_06528 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375165464|gb|EFP80572.2| hypothetical protein PGTG_06528 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 449
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/281 (31%), Positives = 138/281 (49%), Gaps = 20/281 (7%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVL--SVRVCRDLSTRRSLGYGYVNYA 79
AS + S++VGDL ++T Q+ +FSQV +L S+R R + ++ Y YV Y
Sbjct: 165 ASRTTSVDHSVFVGDLPGSITHEQIVKVFSQVSPILKISIRYPRSQAIKKLRAYAYVTYH 224
Query: 80 NPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFS 139
+ DA+ A+ N T K R++ D ++ + NI++ L S+ A HDTFS
Sbjct: 225 SAEDASTAIREFNQTVFEGKPCRVVRVQHD-DLKSNKEANIYVGGLPPSLTGVAFHDTFS 283
Query: 140 SFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDK--------QVFVG 191
FG ILS K+ + S FGF+Q+ E A+ AI K NG ++ K +F G
Sbjct: 284 EFGEILSSKLVVNPKNVSNPFGFIQYATAEEAEIAIQKTNGATLDMKDSTRPISTSLFEG 343
Query: 192 HFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCF 251
K R+ F+NV+ KN+ + T + E+G TS + +D DGK
Sbjct: 344 Q--AKPPRQ-----PPFHNVYFKNIPKDITRRCFDQFCEEFGPTTSTFLKKDADGKPMGI 396
Query: 252 GFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQ 292
GF NF N +DA K VE + +++ + +A + ER +
Sbjct: 397 GFANFSNTNDAVKIVEYI--RQYAPMGLHAARAYTRGERNR 435
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 111/275 (40%), Gaps = 25/275 (9%)
Query: 94 TPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG 153
TPLN+ ++ R S+ S +F+ +L SI H+ + FS IL I
Sbjct: 155 TPLNH--FPPQHASRTTSVDHS----VFVGDLPGSITHEQIVKVFSQVSPILKISIRYPR 208
Query: 154 SGQSK---GFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNN 210
S K + +V + + E A AI + N + K V +R Q + + K N
Sbjct: 209 SQAIKKLRAYAYVTYHSAEDASTAIREFNQTVFEGKPCRV---VRVQHDDLKSNKEA--N 263
Query: 211 VFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALN 270
++V L S T F E+G I S+ ++ + S FGF+ + A++A A++ N
Sbjct: 264 IYVGGLPPSLTGVAFHDTFSEFGEILSSKLVVNPKNVSNPFGFIQYATAEEAEIAIQKTN 323
Query: 271 GKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKE 330
G D K S R QA F N+Y KN+ I +
Sbjct: 324 GATLD---------MKDSTRPISTSLFEGQAKPPRQPPFH--NVYFKNIPKDITRRCFDQ 372
Query: 331 LFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEA 365
EFG TS + +D G G GF FS +A
Sbjct: 373 FCEEFGPTTSTFLKKDADGKPMGIGFANFSNTNDA 407
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 86/191 (45%), Gaps = 23/191 (12%)
Query: 190 VGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVM---RDGDG 246
+ HF + T ++ ++VFV +L S T E + K+F + I +
Sbjct: 157 LNHFPPQHASRTTSVD---HSVFVGDLPGSITHEQIVKVFSQVSPILKISIRYPRSQAIK 213
Query: 247 KSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETV 306
K + + +V + +A+DA+ A+ N F+ + V + Q +LK E
Sbjct: 214 KLRAYAYVTYHSAEDASTAIREFNQTVFEGKPCRVVRVQ-----HDDLKSNKEA------ 262
Query: 307 DKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEAS 366
N+Y+ L S+ + FSEFG I S K++ +P +S GF+ ++T EEA
Sbjct: 263 ------NIYVGGLPPSLTGVAFHDTFSEFGEILSSKLVVNPKNVSNPFGFIQYATAEEAE 316
Query: 367 RALAEMNGKMI 377
A+ + NG +
Sbjct: 317 IAIQKTNGATL 327
>gi|170042459|ref|XP_001848942.1| polyadenylate-binding protein [Culex quinquefasciatus]
gi|167866018|gb|EDS29401.1| polyadenylate-binding protein [Culex quinquefasciatus]
Length = 339
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/256 (34%), Positives = 141/256 (55%), Gaps = 33/256 (12%)
Query: 138 FSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQ 197
FSS GN+LSCK+A D G SKG+ FV F SA +AID++NG+ +N
Sbjct: 2 FSSVGNVLSCKVALDIQGCSKGYAFVYFYATSSAHSAIDRVNGLAVNGA----------- 50
Query: 198 ERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFE 257
++A+ F + V+N + T L+++F YG+I + V KS+ GF+ ++
Sbjct: 51 ---SLAVSPLFTKLHVRNFGDRLTQTTLQELFAPYGSIKAHGV------KSRGCGFIIYD 101
Query: 258 NADDAAKAVEALNGKKFDDREWYVGKAQKKSER-EQELKGQFEQAMKETVDKFQGLNLYI 316
+ + A A+EALNGK D GKA + E+ L+ A E V +++
Sbjct: 102 SPEAAGHALEALNGKALSD-----GKALRVVPVPERVLQPAPRLAEGEAV------QVFV 150
Query: 317 KNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKM 376
+NL SID+ L ELF+ +G + ++++ G SKG GFV +++ E+A+RA+ EMN +
Sbjct: 151 RNLDASIDNRHLGELFAPYGDVQRGFIVKE-QGKSKGFGFVTYASGEQAARAIVEMNDRE 209
Query: 377 IVSKPLYVAVAQRKEE 392
+ K +YV +A+ KE+
Sbjct: 210 VAGKRIYVVLARGKEK 225
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 123/250 (49%), Gaps = 34/250 (13%)
Query: 49 LFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHR 108
+FS VG VLS +V D+ S GY +V + + A A+D +N +N S+ +
Sbjct: 1 MFSSVGNVLSCKVALDIQG-CSKGYAFVYFYATSSAHSAIDRVNGLAVNGASLAV----- 54
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENK 168
P K + ++N + L + F+ +G+I + + +S+G GF+ +++
Sbjct: 55 SPLFTK-----LHVRNFGDRLTQTTLQELFAPYGSIKAHGV------KSRGCGFIIYDSP 103
Query: 169 ESAQNAIDKLNGMLINDKQVF---------VGHFLRKQERETVAIKTKFNNVFVKNLDES 219
E+A +A++ LNG ++D + + R E E V VFV+NLD S
Sbjct: 104 EAAGHALEALNGKALSDGKALRVVPVPERVLQPAPRLAEGEAV-------QVFVRNLDAS 156
Query: 220 TTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREW 279
+ L ++F YG + ++++ GKSK FGFV + + + AA+A+ +N ++ +
Sbjct: 157 IDNRHLGELFAPYGDVQRGFIVKE-QGKSKGFGFVTYASGEQAARAIVEMNDREVAGKRI 215
Query: 280 YVGKAQKKSE 289
YV A+ K +
Sbjct: 216 YVVLARGKEK 225
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 91/169 (53%), Gaps = 14/169 (8%)
Query: 28 LTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARA 87
L T L+V + +T + L +LF+ G + + V +S G G++ Y +P A A
Sbjct: 57 LFTKLHVRNFGDRLTQTTLQELFAPYGSIKAHGV-------KSRGCGFIIYDSPEAAGHA 109
Query: 88 LDVLNFTPLNN-KSIRIM-----YSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
L+ LN L++ K++R++ P + + +F++NLD SID++ L + F+ +
Sbjct: 110 LEALNGKALSDGKALRVVPVPERVLQPAPRLAEGEAVQVFVRNLDASIDNRHLGELFAPY 169
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFV 190
G++ I + G+SKGFGFV + + E A AI ++N + K+++V
Sbjct: 170 GDVQRGFIVKE-QGKSKGFGFVTYASGEQAARAIVEMNDREVAGKRIYV 217
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 147/356 (41%), Gaps = 59/356 (16%)
Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
+F G + S V D G SK + FV F A A++ +NG + V K
Sbjct: 1 MFSSVGNVLSCKVALDIQGCSKGYAFVYFYATSSAHSAIDRVNGLAVNGASLAVSPLFTK 60
Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
L+++N GD + L+ELF+ +G+I + V
Sbjct: 61 --------------------------LHVRNFGDRLTQTTLQELFAPYGSIKAHGVK--- 91
Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIV-SKPLYVA-VAQRKEERRARL-QAQFSQM 404
S+G GF+ + +PE A AL +NGK + K L V V +R + RL + + Q+
Sbjct: 92 ---SRGCGFIIYDSPEAAGHALEALNGKALSDGKALRVVPVPERVLQPAPRLAEGEAVQV 148
Query: 405 RPVAMGPSVPPRMPMYPPGPSGLGQQFL-YGQAPPA-IIPPQMPPRGHAY-RYPLGRNMQ 461
+ S+ R LG+ F YG I+ Q +G + Y G
Sbjct: 149 FVRNLDASIDNRH---------LGELFAPYGDVQRGFIVKEQGKSKGFGFVTYASGEQAA 199
Query: 462 DFPFDMG----AGSMLPVPVDMGAGIPR--RDASVGQPMPITALSTAL---ANASPEQQR 512
+M AG + V + G P+ + G T T+L P++ +
Sbjct: 200 RAIVEMNDREVAGKRIYVVLARGKEKPKPVSEVDAGHEPATTTDDTSLLLKTITDPDELK 259
Query: 513 TLLGESLYPLVEQ-LERDAAAKVT-GMLLEMDQTEVLHLLESPEALKAKVAEAMEV 566
+LL LYPLV+ + A ++T M+ + ++++ LL+ P+ L+ VA+++ +
Sbjct: 260 SLLAHQLYPLVKACVNAQTAGRITFQMVRQHSASDLVALLKDPKRLQT-VAKSVAI 314
>gi|410927510|ref|XP_003977185.1| PREDICTED: ELAV-like protein 1-like [Takifugu rubripes]
Length = 341
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 148/296 (50%), Gaps = 50/296 (16%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
T+L V L N++ +L LFS +G+V S ++ RD SLGYG+VNY P+DA RA++
Sbjct: 35 TNLIVNYLPQNMSQEELRSLFSSIGEVESAKLIRDKIAGHSLGYGFVNYVTPSDAERAIN 94
Query: 90 VLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKI 149
LN L +K+I++ Y+ PS N++I L KS+ K + D FS FG I++ ++
Sbjct: 95 TLNGLRLQSKNIKVSYAR--PSSDTIKDANLYISGLPKSMTQKDVEDMFSRFGRIINSRV 152
Query: 150 ATD-GSGQSKGFGFVQFENKESAQNAIDKLNG---------------------------- 180
D +G S+G F++F+ + A++A++ LNG
Sbjct: 153 LVDQATGASRGVAFIRFDKRAEAEDAVNNLNGQKPSGVVEPITVKFAANPNQTKNTQVIS 212
Query: 181 -MLINDKQVFVGHFLRKQER--------------ETVAIKTKFNN---VFVKNLDESTTD 222
+ N + F G + +R V++ T NN +F+ NL + +
Sbjct: 213 QLFHNQSRRFGGPLHHQAQRFRFSPMSVDHMGGVGGVSVPTNSNNGWCIFIYNLGQEADE 272
Query: 223 EDLKKIFGEYGTITSAVVMRD-GDGKSKCFGFVNFENADDAAKAVEALNGKKFDDR 277
L ++FG +G +T+ V+RD K K FGFV N +DAA A+ +LNG + ++
Sbjct: 273 TILWQMFGPFGAVTNVKVIRDFTTNKCKGFGFVTMSNYEDAAMAIASLNGYRLGEK 328
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 142/317 (44%), Gaps = 43/317 (13%)
Query: 114 KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQ 172
K N+ + L +++ + L FSS G + S K+ D +G S G+GFV + A+
Sbjct: 31 KDAKTNLIVNYLPQNMSQEELRSLFSSIGEVESAKLIRDKIAGHSLGYGFVNYVTPSDAE 90
Query: 173 NAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEY 232
AI+ LNG+ + K + V + + +T+ K N+++ L +S T +D++ +F +
Sbjct: 91 RAINTLNGLRLQSKNIKVSY--ARPSSDTI----KDANLYISGLPKSMTQKDVEDMFSRF 144
Query: 233 GTITSAVVMRD-GDGKSKCFGFVNFENADDAAKAVEALNGK-----------KFDDREWY 280
G I ++ V+ D G S+ F+ F+ +A AV LNG+ KF
Sbjct: 145 GRIINSRVLVDQATGASRGVAFIRFDKRAEAEDAVNNLNGQKPSGVVEPITVKFAANPNQ 204
Query: 281 VGKAQKKSEREQELKGQFEQAMKETVDKFQ-----------------------GLNLYIK 317
Q S+ +F + +F+ G ++I
Sbjct: 205 TKNTQVISQLFHNQSRRFGGPLHHQAQRFRFSPMSVDHMGGVGGVSVPTNSNNGWCIFIY 264
Query: 318 NLGDSIDDEKLKELFSEFGTITSCKVMRD-PSGISKGSGFVAFSTPEEASRALAEMNGKM 376
NLG D+ L ++F FG +T+ KV+RD + KG GFV S E+A+ A+A +NG
Sbjct: 265 NLGQEADETILWQMFGPFGAVTNVKVIRDFTTNKCKGFGFVTMSNYEDAAMAIASLNGYR 324
Query: 377 IVSKPLYVAVAQRKEER 393
+ K L V+ K +
Sbjct: 325 LGEKILQVSFKTSKGHK 341
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 53/111 (47%), Gaps = 13/111 (11%)
Query: 6 VQHQAQ-----------MSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVG 54
+ HQAQ M G GV+ + N +Y +L ++ L+ +F G
Sbjct: 226 LHHQAQRFRFSPMSVDHMGGVGGVSVPTNSNNGWCIFIY--NLGQEADETILWQMFGPFG 283
Query: 55 QVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMY 105
V +V+V RD +T + G+G+V +N DAA A+ LN L K +++ +
Sbjct: 284 AVTNVKVIRDFTTNKCKGFGFVTMSNYEDAAMAIASLNGYRLGEKILQVSF 334
>gi|403354844|gb|EJY76981.1| Polyadenylate-binding protein, putative [Oxytricha trifallax]
Length = 590
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 142/515 (27%), Positives = 225/515 (43%), Gaps = 90/515 (17%)
Query: 118 GNIFIKNLDKSIDHKALHDTFSSF--GNIL-SCKIATDGSGQSKGFGFVQFENKESAQNA 174
N+FIKNLDKSI + L +TFS G+++ S K++ + S+G+GFV E A+ A
Sbjct: 101 NNLFIKNLDKSITSQQLDETFSKVLGGDVVVSAKVSINADYSSRGYGFVFLATPEQAEQA 160
Query: 175 IDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGT 234
+ K + V + K RE I+ FNN+++KN + E +++IFG+YGT
Sbjct: 161 LAKASEFKFE-----VHPYQPKDRRE---IRKTFNNIYIKNFPSNWNKEKIEQIFGQYGT 212
Query: 235 ITSAVVMR---DGDGKSKCFGFVNFENADD-------AAKAVEALNGKKFDDREWYVGKA 284
I S V+ G + F FV +E+ D+ A A+ N K++D + YV +A
Sbjct: 213 IKSTVIKMGKVQGTDQEAPFAFVCYEDKDNKEYGPKCALNAINQENDKEYDGIKLYVKEA 272
Query: 285 QKKSEREQELK---GQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSC 341
K+ REQE K +F+ + K NLY+KN ++ +E+LK F ++G I S
Sbjct: 273 LPKTLREQEKKREQNRFKNSKKRC-------NLYVKNFPENTTEEQLKAYFEKYGEIESI 325
Query: 342 KVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERR-----AR 396
K+ FV + PE A+ A + + + K L++ ++KE R+ AR
Sbjct: 326 KLNHKEGAAV--YAFVCYKNPESATYAKQQSQTQTLNGKQLFLNFYEQKEVRKIQQEDAR 383
Query: 397 LQAQFSQMRPVAMGPSVPPRMPMYPPG-------------------------------PS 425
+ F +R + ++ M P
Sbjct: 384 DRTDFQNLRKQSPTSALNIDMLNRPETFQLLQYLMITIQRQQQNQRYNNPQRQGGNMQQR 443
Query: 426 GLGQQFL----YGQAPPAIIPPQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPV----PV 477
G QQ+ Y Q + QMPP R P P M + M + P
Sbjct: 444 GPRQQYNNQGGYQQRNQQLPQGQMPPMNQQMRQPQQ------PVIMPSQVMPALAQVAPS 497
Query: 478 DMGAGIPRRDASVGQP--MPITALSTALANASPEQQRTLLGESLYPLVEQLE-RDAAAKV 534
M +P + Q I L +AL +P ++ +GE +Y VE+L D A K+
Sbjct: 498 AMNQNLPPHILTYNQNGMSKIFPLVSAL---NPN-YKSQVGEFIYEHVEELAGEDLAPKI 553
Query: 535 TGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRS 569
TGML+++ E+ + LK K+ EA +L+S
Sbjct: 554 TGMLIDLPIVEIQAYVTDFMKLKIKINEASTLLKS 588
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 139/293 (47%), Gaps = 53/293 (18%)
Query: 18 VAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQV--GQVL---SVRVCRDLSTRRSLG 72
V A N +L++ +LD ++T QL + FS+V G V+ V + D S+R G
Sbjct: 89 VTAAQRNNVNKQNNLFIKNLDKSITSQQLDETFSKVLGGDVVVSAKVSINADYSSR---G 145
Query: 73 YGYVNYANPADAARAL--------DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKN 124
YG+V A P A +AL +V + P + + IR ++ NI+IKN
Sbjct: 146 YGFVFLATPEQAEQALAKASEFKFEVHPYQPKDRREIRKTFN------------NIYIKN 193
Query: 125 LDKSIDHKALHDTFSSFGNILSCKI---ATDGSGQSKGFGFVQFENKES-------AQNA 174
+ + + + F +G I S I G+ Q F FV +E+K++ A NA
Sbjct: 194 FPSNWNKEKIEQIFGQYGTIKSTVIKMGKVQGTDQEAPFAFVCYEDKDNKEYGPKCALNA 253
Query: 175 IDKLNGMLINDKQVFVGH----FLRKQE--RETVAIKT--KFNNVFVKNLDESTTDEDLK 226
I++ N + +++V LR+QE RE K K N++VKN E+TT+E LK
Sbjct: 254 INQENDKEYDGIKLYVKEALPKTLREQEKKREQNRFKNSKKRCNLYVKNFPENTTEEQLK 313
Query: 227 KIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKA-----VEALNGKKF 274
F +YG I S + + +G + + FV ++N + A A + LNGK+
Sbjct: 314 AYFEKYGEIES-IKLNHKEG-AAVYAFVCYKNPESATYAKQQSQTQTLNGKQL 364
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 109/238 (45%), Gaps = 42/238 (17%)
Query: 183 INDKQVFVGHFLRK---QERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEY---GTIT 236
IN KQ +L++ +R V K NN+F+KNLD+S T + L + F + +
Sbjct: 75 INGKQCRALPYLKEVTAAQRNNV---NKQNNLFIKNLDKSITSQQLDETFSKVLGGDVVV 131
Query: 237 SAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKG 296
SA V + D S+ +GFV + A +A+ + KF+ V Q K RE
Sbjct: 132 SAKVSINADYSSRGYGFVFLATPEQAEQALAKASEFKFE-----VHPYQPKDRRE----- 181
Query: 297 QFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKV-MRDPSGISKGS- 354
+++T + N+YIKN + + EK++++F ++GTI S + M G + +
Sbjct: 182 -----IRKTFN-----NIYIKNFPSNWNKEKIEQIFGQYGTIKSTVIKMGKVQGTDQEAP 231
Query: 355 -GFVAFST-------PEEASRALAEMNGKMIVSKPLYVAVAQRK---EERRARLQAQF 401
FV + P+ A A+ + N K LYV A K E+ + R Q +F
Sbjct: 232 FAFVCYEDKDNKEYGPKCALNAINQENDKEYDGIKLYVKEALPKTLREQEKKREQNRF 289
>gi|432092097|gb|ELK24806.1| Polyadenylate-binding protein 4 [Myotis davidii]
Length = 179
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 64/118 (54%), Positives = 81/118 (68%)
Query: 21 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYAN 80
+ + + SLYV DL ++VTD+ LY+ FS VLS+ VC + SLGY Y+N+
Sbjct: 2 NTAASSYPMASLYVADLHWDVTDAMLYEQFSPARPVLSIWVCHNKIISHSLGYAYINFQQ 61
Query: 81 PADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTF 138
PADA RALD +NF + K I IM+S RDPS+RKS GNIFIK LDKSID+KAL+DTF
Sbjct: 62 PADAERALDTMNFDVIKGKPIHIMWSQRDPSVRKSAVGNIFIKKLDKSIDNKALYDTF 119
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 55/113 (48%), Gaps = 5/113 (4%)
Query: 118 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGS-GQSKGFGFVQFENKESAQNAID 176
++++ +L + L++ FS +LS + + S G+ ++ F+ A+ A+D
Sbjct: 11 ASLYVADLHWDVTDAMLYEQFSPARPVLSIWVCHNKIISHSLGYAYINFQQPADAERALD 70
Query: 177 KLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIF 229
+N +I K + H + Q +V K+ N+F+K LD+S ++ L F
Sbjct: 71 TMNFDVIKGKPI---HIMWSQRDPSVR-KSAVGNIFIKKLDKSIDNKALYDTF 119
Score = 42.4 bits (98), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Query: 302 MKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPS-GISKGSGFVAFS 360
M + +LY+ +L + D L E FS + S V + S G ++ F
Sbjct: 1 MNTAASSYPMASLYVADLHWDVTDAMLYEQFSPARPVLSIWVCHNKIISHSLGYAYINFQ 60
Query: 361 TPEEASRALAEMNGKMIVSKPLYVAVAQRKEERR 394
P +A RAL MN +I KP+++ +QR R
Sbjct: 61 QPADAERALDTMNFDVIKGKPIHIMWSQRDPSVR 94
>gi|440293224|gb|ELP86367.1| polyadenylate-binding protein, putative [Entamoeba invadens IP1]
Length = 519
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 179/371 (48%), Gaps = 26/371 (7%)
Query: 12 MSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQV--GQVLSVRVCRDLSTRR 69
MS P + N+ +++V L NVT+S LY S QV SV V R+
Sbjct: 1 MSAPQNLFPNFDDNK----TIFVSSLSKNVTESLLYKEISAKFESQVASVHVSRNEHYDT 56
Query: 70 SLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSI 129
++ Y VN A +A++ +N ++ K++ + +S +D R N+F+KN+ K++
Sbjct: 57 AIAY--VNMNTHEAAKKAIETMNGALIDGKTVNMFWSLKDFKQRTETQTNLFVKNIKKTV 114
Query: 130 DHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVF 189
K + D F +FG I+S K++ + +G S GFG+V++ E+A A++ N I K
Sbjct: 115 SQKEMQDVFMTFGEIISVKLSVNENGASNGFGYVKYRTIEAALKAVE--NAAEIKAKIGE 172
Query: 190 VGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITS------AVVMRD 243
+ K E++T K K N++V N+D+S +E K F +G + V+
Sbjct: 173 DNFIVAKFEKQT---KNKKTNLYVSNIDKSVNEEQFVKYFETFGPLRKNPDNKFQVLFAC 229
Query: 244 GDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMK 303
D GFV+FEN +DA KA+ A E V +SER + + +
Sbjct: 230 DDKHPTAMGFVDFENEEDAQKALTAPKNNVLGQGEIKVDYYMSRSERSRVWLQKSLEIKS 289
Query: 304 ETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVM---RDPSGISKGSGFVAFS 360
K++ N+YI L + D +++ F++ G I S +V + P+ I+ FV F+
Sbjct: 290 NIQGKYKDFNMYINTLKEPTSDAEIRSAFADCGEIYSVRVKYYEKVPTSIA----FVCFT 345
Query: 361 TPEEASRALAE 371
+ E ++A+ +
Sbjct: 346 SQEAFNKAMTK 356
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 133/296 (44%), Gaps = 47/296 (15%)
Query: 120 IFIKNLDKSIDHKALHDTFSS-FGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKL 178
IF+ +L K++ L+ S+ F + ++ + +V E+A+ AI+ +
Sbjct: 17 IFVSSLSKNVTESLLYKEISAKFESQVASVHVSRNEHYDTAIAYVNMNTHEAAKKAIETM 76
Query: 179 NGMLINDKQVFVGHFLR--KQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTIT 236
NG LI+ K V + L+ KQ ET N+FVKN+ ++ + ++++ +F +G I
Sbjct: 77 NGALIDGKTVNMFWSLKDFKQRTETQT------NLFVKNIKKTVSQKEMQDVFMTFGEII 130
Query: 237 SAVVMRDGDGKSKCFGFVNFENADDAAKAVE--ALNGKKFDDREWYVGKAQKKSEREQEL 294
S + + +G S FG+V + + A KAVE A K + + V K +K+++ ++
Sbjct: 131 SVKLSVNENGASNGFGYVKYRTIEAALKAVENAAEIKAKIGEDNFIVAKFEKQTKNKK-- 188
Query: 295 KGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFG-----------TITSCKV 343
NLY+ N+ S+++E+ + F FG + +C
Sbjct: 189 -----------------TNLYVSNIDKSVNEEQFVKYFETFGPLRKNPDNKFQVLFACDD 231
Query: 344 MRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEER-RARLQ 398
+ P+ + GFV F E+A +AL ++ + V + ER R LQ
Sbjct: 232 -KHPTAM----GFVDFENEEDAQKALTAPKNNVLGQGEIKVDYYMSRSERSRVWLQ 282
>gi|14571727|emb|CAC42820.1| Poly(A)-binding protein cytoplasmic 5 [Mus musculus]
Length = 119
Score = 137 bits (346), Expect = 1e-29, Method: Composition-based stats.
Identities = 65/120 (54%), Positives = 89/120 (74%), Gaps = 1/120 (0%)
Query: 71 LGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSID 130
LGYGYVN+ PADA AL+ +NF +N K R+M+S D +RKSG GNIFIKNLDK+ID
Sbjct: 1 LGYGYVNFRFPADAEWALNTMNFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKTID 60
Query: 131 HKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFV 190
++AL FS+FGNILSCK+ D +G SKG+ +V F++ +A AI +NG+ +N++QV+V
Sbjct: 61 NRALFYLFSAFGNILSCKVVCDDNG-SKGYAYVHFDSLAAANRAIWHVNGVRLNNRQVYV 119
Score = 63.5 bits (153), Expect = 3e-07, Method: Composition-based stats.
Identities = 42/134 (31%), Positives = 67/134 (50%), Gaps = 17/134 (12%)
Query: 251 FGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQ 310
+G+VNF DA A+ +N + + + + +Q + G
Sbjct: 3 YGYVNFRFPADAEWALNTMNFDLINGKPFRLMWSQPDDRLRKSGVG-------------- 48
Query: 311 GLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALA 370
N++IKNL +ID+ L LFS FG I SCKV+ D +G SKG +V F + A+RA+
Sbjct: 49 --NIFIKNLDKTIDNRALFYLFSAFGNILSCKVVCDDNG-SKGYAYVHFDSLAAANRAIW 105
Query: 371 EMNGKMIVSKPLYV 384
+NG + ++ +YV
Sbjct: 106 HVNGVRLNNRQVYV 119
Score = 62.4 bits (150), Expect = 6e-07, Method: Composition-based stats.
Identities = 38/123 (30%), Positives = 69/123 (56%), Gaps = 5/123 (4%)
Query: 159 GFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDE 218
G+G+V F A+ A++ +N LIN K + Q + + K+ N+F+KNLD+
Sbjct: 2 GYGYVNFRFPADAEWALNTMNFDLINGKPF---RLMWSQPDDRLR-KSGVGNIFIKNLDK 57
Query: 219 STTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDRE 278
+ + L +F +G I S V+ D +G SK + +V+F++ A +A+ +NG + ++R+
Sbjct: 58 TIDNRALFYLFSAFGNILSCKVVCDDNG-SKGYAYVHFDSLAAANRAIWHVNGVRLNNRQ 116
Query: 279 WYV 281
YV
Sbjct: 117 VYV 119
Score = 43.5 bits (101), Expect = 0.31, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 44/74 (59%), Gaps = 4/74 (5%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVR-VCRDLSTRRSLGYGYVNYANPADAARALD 89
++++ +LD + + L+ LFS G +LS + VC D ++ GY YV++ + A A RA+
Sbjct: 49 NIFIKNLDKTIDNRALFYLFSAFGNILSCKVVCDDNGSK---GYAYVHFDSLAAANRAIW 105
Query: 90 VLNFTPLNNKSIRI 103
+N LNN+ + +
Sbjct: 106 HVNGVRLNNRQVYV 119
>gi|365812510|ref|NP_001002172.2| ELAV-like protein 2 [Danio rerio]
Length = 389
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 157/347 (45%), Gaps = 71/347 (20%)
Query: 13 SGPNGVAAGAS-------GNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDL 65
+GPN V+ + G++ T+L V L N+T +L LF +G++ S ++ RD
Sbjct: 44 NGPNSVSNTCTSPVEMPNGSEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDK 103
Query: 66 STRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNL 125
T +SLGYG+VNY P DA +A++ LN L K+I++ Y+ PS N+++ L
Sbjct: 104 ITGQSLGYGFVNYMEPKDAEKAINTLNGLRLQTKTIKVSYAR--PSSASIRDANLYVSGL 161
Query: 126 DKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKLNGM--- 181
K++ K L FS FG I++ +I D +G S+G GF++F+ + A+ AI LNG
Sbjct: 162 PKTMTQKELEQLFSQFGRIITSRILVDQVTGVSRGVGFIRFDRRVEAEEAIKGLNGQKPP 221
Query: 182 ---------LIND-----KQVFVGHFLRKQERE--------------------TVAIKTK 207
N+ Q + H + R +K++
Sbjct: 222 GATEPITVKFANNPSQKSSQALLSHLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGVKSR 281
Query: 208 FN-----------------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD- 243
F+ +FV NL + L ++FG +G +T+ V+RD
Sbjct: 282 FSPMTIDGVTSLAGINLPAHAGTGWCIFVYNLAPDADENVLWQMFGPFGAVTNVKVIRDF 341
Query: 244 GDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSER 290
K K FGFV N D+AA A+ +LNG + DR V K+ +
Sbjct: 342 NTNKCKGFGFVTMTNYDEAAVAIASLNGYRLGDRVLQVSFKTNKTHK 388
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 153/326 (46%), Gaps = 57/326 (17%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDK 177
N+ + L +++ + L F S G I SCK+ D +GQS G+GFV + + A+ AI+
Sbjct: 69 NLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYMEPKDAEKAINT 128
Query: 178 LNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYG-TIT 236
LNG+ + K + V + + +I+ N++V L ++ T ++L+++F ++G IT
Sbjct: 129 LNGLRLQTKTIKVSY----ARPSSASIRDA--NLYVSGLPKTMTQKELEQLFSQFGRIIT 182
Query: 237 SAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKK-----------FDDR-------- 277
S +++ G S+ GF+ F+ +A +A++ LNG+K F +
Sbjct: 183 SRILVDQVTGVSRGVGFIRFDRRVEAEEAIKGLNGQKPPGATEPITVKFANNPSQKSSQA 242
Query: 278 ----------EWYVGKAQKKSER---------EQELKGQFEQAMKETVDKFQGLNL---- 314
Y G ++++R +K +F + V G+NL
Sbjct: 243 LLSHLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGVKSRFSPMTIDGVTSLAGINLPAHA 302
Query: 315 ------YIKNLGDSIDDEKLKELFSEFGTITSCKVMRD-PSGISKGSGFVAFSTPEEASR 367
++ NL D+ L ++F FG +T+ KV+RD + KG GFV + +EA+
Sbjct: 303 GTGWCIFVYNLAPDADENVLWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAV 362
Query: 368 ALAEMNGKMIVSKPLYVAVAQRKEER 393
A+A +NG + + L V+ K +
Sbjct: 363 AIASLNGYRLGDRVLQVSFKTNKTHK 388
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 100/199 (50%), Gaps = 24/199 (12%)
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENADDAAKAVEA 268
N+ V L ++ T E+LK +FG G I S ++RD G+S +GFVN+ DA KA+
Sbjct: 69 NLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYMEPKDAEKAINT 128
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
LNG + + V A+ S + NLY+ L ++ ++L
Sbjct: 129 LNGLRLQTKTIKVSYARPSSA------------------SIRDANLYVSGLPKTMTQKEL 170
Query: 329 KELFSEFGTITSCKVMRDP-SGISKGSGFVAFSTPEEASRALAEMNGKMI--VSKPLYVA 385
++LFS+FG I + +++ D +G+S+G GF+ F EA A+ +NG+ ++P+ V
Sbjct: 171 EQLFSQFGRIITSRILVDQVTGVSRGVGFIRFDRRVEAEEAIKGLNGQKPPGATEPITVK 230
Query: 386 VAQRKEERRARLQAQFSQM 404
A ++ + QA S +
Sbjct: 231 FANNPSQKSS--QALLSHL 247
>gi|260656096|pdb|2K8G|A Chain A, Solution Structure Of Rrm2 Domain Of Pabp1
Length = 95
Score = 137 bits (345), Expect = 2e-29, Method: Composition-based stats.
Identities = 64/92 (69%), Positives = 81/92 (88%), Gaps = 1/92 (1%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENK 168
DPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FGNILSCK+ D +G SKG+GFV FE +
Sbjct: 3 DPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQ 61
Query: 169 ESAQNAIDKLNGMLINDKQVFVGHFLRKQERE 200
E+A+ AI+K+NGML+ND++VFVG F ++ERE
Sbjct: 62 EAAERAIEKMNGMLLNDRKVFVGRFKSRKERE 93
Score = 75.5 bits (184), Expect = 7e-11, Method: Composition-based stats.
Identities = 39/83 (46%), Positives = 56/83 (67%), Gaps = 1/83 (1%)
Query: 313 NLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEM 372
N++IKNL SID++ L + FS FG I SCKV+ D +G SKG GFV F T E A RA+ +M
Sbjct: 13 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKM 71
Query: 373 NGKMIVSKPLYVAVAQRKEERRA 395
NG ++ + ++V + ++ER A
Sbjct: 72 NGMLLNDRKVFVGRFKSRKEREA 94
Score = 72.0 bits (175), Expect = 9e-10, Method: Composition-based stats.
Identities = 36/89 (40%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 205 KTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAK 264
K+ N+F+KNLD+S ++ L F +G I S V+ D +G SK +GFV+FE + A +
Sbjct: 8 KSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAER 66
Query: 265 AVEALNGKKFDDREWYVGKAQKKSEREQE 293
A+E +NG +DR+ +VG+ + + ERE E
Sbjct: 67 AIEKMNGMLLNDRKVFVGRFKSRKEREAE 95
Score = 45.1 bits (105), Expect = 0.100, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ +LD ++ + LYD FS G +LS +V D S GYG+V++ A RA++
Sbjct: 13 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD--ENGSKGYGFVHFETQEAAERAIEK 70
Query: 91 LNFTPLNNKSI 101
+N LN++ +
Sbjct: 71 MNGMLLNDRKV 81
>gi|351699217|gb|EHB02136.1| Polyadenylate-binding protein 4 [Heterocephalus glaber]
Length = 205
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/120 (53%), Positives = 86/120 (71%)
Query: 22 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
A+ + SL VGDL + ++ LY+ FS+ G VL +RVC D+ TRRSLG+ YV++ P
Sbjct: 3 AAVRSYPVASLSVGDLHSDAAEAVLYEKFSRAGPVLPIRVCGDVITRRSLGHAYVSFQQP 62
Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
A+A RALD +NF + K I IM+ +DPS+ KSG GN+FIKNLDKSID+KAL+DTFS+
Sbjct: 63 AEAERALDTMNFDGIKGKQIYIMWPQKDPSLTKSGVGNVFIKNLDKSIDNKALYDTFSAL 122
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 60/122 (49%), Gaps = 5/122 (4%)
Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFEN 167
+ ++R ++ + +L L++ FS G +L ++ D + +S G +V F+
Sbjct: 2 NAAVRSYPVASLSVGDLHSDAAEAVLYEKFSRAGPVLPIRVCGDVITRRSLGHAYVSFQQ 61
Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
A+ A+D +N I KQ+++ +++ K+ NVF+KNLD+S ++ L
Sbjct: 62 PAEAERALDTMNFDGIKGKQIYI----MWPQKDPSLTKSGVGNVFIKNLDKSIDNKALYD 117
Query: 228 IF 229
F
Sbjct: 118 TF 119
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 26/31 (83%)
Query: 539 LEMDQTEVLHLLESPEALKAKVAEAMEVLRS 569
LEMD +E+LH LESP++L +KV EA+ VL++
Sbjct: 150 LEMDNSELLHTLESPKSLHSKVDEAVAVLQA 180
>gi|123430889|ref|XP_001307992.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121889649|gb|EAX95062.1| hypothetical protein TVAG_428650 [Trichomonas vaginalis G3]
Length = 537
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 144/271 (53%), Gaps = 21/271 (7%)
Query: 32 LYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVL 91
+++ +L +T + L + G+V++V L R++ + +V + P A +A+
Sbjct: 11 VHISNLPSGITTDFIKILLQECGEVVNVT----LKERQNGNFAFVTFDTPESALKAIKEF 66
Query: 92 NFTPLNNKSIRIMYSHRD-PSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
N+T LN I I + ++ ++ KSG GN++++ LD I+ LH+ F ++G ++SCK+
Sbjct: 67 NYTKLNGSPIVITPTTQEYQNLIKSGEGNLYVRGLDVYIEVSQLHELFQTYGEVISCKLP 126
Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQE----------RE 200
T G +KG+ +VQF + A+ A +LN +IN K++ V + +K+ R
Sbjct: 127 TGTDGLNKGYAYVQFRDPNDAEKARVELNDAVINGKKISVEPYKKKERPQKTSPASNPRG 186
Query: 201 TVAIKTKFNNVFVKNLDESTTDE-DLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
A F N+F++NL + +E DL +F E+G + S ++ DG GF N +
Sbjct: 187 APASDDVFTNIFIRNLPSNVRNETDLGNLFSEFGVVISTKMLPDG-----FSGFCNMIDH 241
Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSER 290
D A +A++ALNGK D + V +A K ER
Sbjct: 242 DSAVRAIQALNGKVIDGKVLEVVRAISKEER 272
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 128/275 (46%), Gaps = 14/275 (5%)
Query: 120 IFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLN 179
+ I NL I + G +++ + Q+ F FV F+ ESA AI + N
Sbjct: 11 VHISNLPSGITTDFIKILLQECGEVVNVTLKER---QNGNFAFVTFDTPESALKAIKEFN 67
Query: 180 GMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAV 239
+N + + QE + + IK+ N++V+ LD L ++F YG + S
Sbjct: 68 YTKLNGSPIVITP--TTQEYQNL-IKSGEGNLYVRGLDVYIEVSQLHELFQTYGEVISCK 124
Query: 240 VMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFE 299
+ DG +K + +V F + +DA KA LN + ++ V +KK ++
Sbjct: 125 LPTGTDGLNKGYAYVQFRDPNDAEKARVELNDAVINGKKISVEPYKKKERPQKTSPASNP 184
Query: 300 QAMKETVDKFQGLNLYIKNLGDSIDDEK-LKELFSEFGTITSCKVMRDPSGISKGSGFVA 358
+ + D F N++I+NL ++ +E L LFSEFG + S K++ P G SGF
Sbjct: 185 RGAPASDDVF--TNIFIRNLPSNVRNETDLGNLFSEFGVVISTKML--PDGF---SGFCN 237
Query: 359 FSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEER 393
+ A RA+ +NGK+I K L V A KEER
Sbjct: 238 MIDHDSAVRAIQALNGKVIDGKVLEVVRAISKEER 272
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 93/188 (49%), Gaps = 25/188 (13%)
Query: 32 LYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSL--GYGYVNYANPADAARALD 89
LYV LD + SQL++LF G+V+S C+ + L GY YV + +P DA +A
Sbjct: 96 LYVRGLDVYIEVSQLHELFQTYGEVIS---CKLPTGTDGLNKGYAYVQFRDPNDAEKARV 152
Query: 90 VLNFTPLNNKSIRI-MYSHRD------PSIRKSGT-------GNIFIKNLDKSIDHKA-L 134
LN +N K I + Y ++ P+ G NIFI+NL ++ ++ L
Sbjct: 153 ELNDAVINGKKISVEPYKKKERPQKTSPASNPRGAPASDDVFTNIFIRNLPSNVRNETDL 212
Query: 135 HDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFL 194
+ FS FG ++S K+ DG GF + +SA AI LNG +I+ K + V +
Sbjct: 213 GNLFSEFGVVISTKMLPDGFS-----GFCNMIDHDSAVRAIQALNGKVIDGKVLEVVRAI 267
Query: 195 RKQERETV 202
K+ER V
Sbjct: 268 SKEERMGV 275
>gi|218195846|gb|EEC78273.1| hypothetical protein OsI_17967 [Oryza sativa Indica Group]
Length = 1001
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 97/303 (32%), Positives = 152/303 (50%), Gaps = 15/303 (4%)
Query: 98 NKSIRIMYSHRDPSIRKSG-------TGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+K + H PS + G N+++ NL S+ L + F FG I+ ++
Sbjct: 270 DKHLHKKQEHTPPSFPQDGGKLKEVDNTNLYVGNLPASVGSHKLIELFLPFGQIVRSRVV 329
Query: 151 TDG-SGQSKGFGFVQFENKESAQNAIDKLNGMLINDK--QVFVGHFLRKQERETVAIK-T 206
D +G S+G+GFV++ + A AI ++NG L+ + +V V F ++ K T
Sbjct: 330 DDCFTGLSQGYGFVKYSDPRCASEAIKRMNGRLVEGRALEVRVAGFPSSEDNSQQPSKET 389
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD-GDGKSKCFGFVNFENADDAAKA 265
++V NL S + L +F +G +T+A V +D G SK +GFV + + AA+A
Sbjct: 390 DMAKLYVCNLSLSMNTDRLIHLFLPFGEVTNAKVAKDHTTGLSKGYGFVQYSSPHHAAEA 449
Query: 266 VEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDD 325
V LNG+ D R+ V + S + TV + NLY+ N+ SID
Sbjct: 450 VIHLNGRLVDGRKIEVRVSGIPSTLPNS--AVESPSTTRTVKEIDMSNLYVCNMPSSIDT 507
Query: 326 EKLKELFSEFGTITSCKVMRDPSGIS-KGSGFVAFSTPEEASRALAEMNGKMIVSKPLYV 384
+KL ELF FG IT +V+ DP S KG GF+ F+ E A++A+A MNG ++ + + V
Sbjct: 508 KKLVELFLPFGKITHARVVADPDTFSAKGYGFIKFTDSESATKAIAAMNGALVGGEMIIV 567
Query: 385 AVA 387
VA
Sbjct: 568 RVA 570
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 107/378 (28%), Positives = 181/378 (47%), Gaps = 42/378 (11%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
T+LYVG+L +V +L +LF GQ++ RV D T S GYG+V Y++P A+ A+
Sbjct: 297 TNLYVGNLPASVGSHKLIELFLPFGQIVRSRVVDDCFTGLSQGYGFVKYSDPRCASEAIK 356
Query: 90 VLNFTPLNNKSIRIMYS--------HRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
+N + +++ + + + PS +++ +++ NL S++ L F F
Sbjct: 357 RMNGRLVEGRALEVRVAGFPSSEDNSQQPS-KETDMAKLYVCNLSLSMNTDRLIHLFLPF 415
Query: 142 GNILSCKIATD-GSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFV---------- 190
G + + K+A D +G SKG+GFVQ+ + A A+ LNG L++ +++ V
Sbjct: 416 GEVTNAKVAKDHTTGLSKGYGFVQYSSPHHAAEAVIHLNGRLVDGRKIEVRVSGIPSTLP 475
Query: 191 GHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKS-K 249
+ + +N++V N+ S + L ++F +G IT A V+ D D S K
Sbjct: 476 NSAVESPSTTRTVKEIDMSNLYVCNMPSSIDTKKLVELFLPFGKITHARVVADPDTFSAK 535
Query: 250 CFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKF 309
+GF+ F +++ A KA+ A+NG V + G A V
Sbjct: 536 GYGFIKFTDSESATKAIAAMNGALVGGEMIIV-----------RVAGLSPSASISAVQTT 584
Query: 310 QGLN---LYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEAS 366
Q +N LYI NL S+ +K+ LF+ FG IT KV+ ++ V ++ A
Sbjct: 585 QDINKSRLYITNLPRSMTADKMVNLFAPFGQIT--KVL-----MNLEYSLVWYADAPSAI 637
Query: 367 RALAEMNGKMIVSKPLYV 384
+A+ M+G M+ K L V
Sbjct: 638 KAVQHMDGYMVEGKRLVV 655
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 170/390 (43%), Gaps = 34/390 (8%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
++LYV ++ ++ +L +LF G++ RV D T + GYG++ + + A +A+
Sbjct: 494 SNLYVCNMPSSIDTKKLVELFLPFGKITHARVVADPDTFSAKGYGFIKFTDSESATKAIA 553
Query: 90 VLNFTPLNNKSIRIMYSHRDPSIRKSGT--------GNIFIKNLDKSIDHKALHDTFSSF 141
+N + + I + + PS S ++I NL +S+ + + F+ F
Sbjct: 554 AMNGALVGGEMIIVRVAGLSPSASISAVQTTQDINKSRLYITNLPRSMTADKMVNLFAPF 613
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
G I + + + V + + SA A+ ++G ++ K++ V ++ E T
Sbjct: 614 GQITKVLMNLE-------YSLVWYADAPSAIKAVQHMDGYMVEGKRLVV----KRSELCT 662
Query: 202 VAI---------KTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFG 252
+ N++V + S T++ +F +G + A + R + +G
Sbjct: 663 TNASQAGGKPIKEIDMANLYVGRVPSSLTEDQFIDLFRPFGRVVQARMFR-----FQRYG 717
Query: 253 FVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGL 312
V F+N AA A++ L+G + V A +E Q +
Sbjct: 718 MVRFDNPSCAAAAIDHLDGYQIGGSILAVRVAGLPAESNAAKGALTSQMSSNEQGQIDMT 777
Query: 313 NLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP-SGISKGSGFVAFSTPEEASRALAE 371
NLY+ +L +++E+L +LF G IT KV+ + +G+SKG GFV F+ A+ AL
Sbjct: 778 NLYVSHLPSYVNNERLIDLFLPCGQITQAKVVVERYTGVSKGFGFVKFADAYSAAVALTH 837
Query: 372 MNGKMIVSKPLYVAVAQRKEERRARLQAQF 401
MNG + L V +A + + A F
Sbjct: 838 MNGYPLDGHVLEVRIAGVHPDAMSSYMAHF 867
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 65/116 (56%), Gaps = 8/116 (6%)
Query: 273 KFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELF 332
+FDD++ ++ K Q+ + G +KE VD NLY+ NL S+ KL ELF
Sbjct: 265 QFDDQDKHLHKKQEHTPPSFPQDGG---KLKE-VDN---TNLYVGNLPASVGSHKLIELF 317
Query: 333 SEFGTITSCKVMRDP-SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 387
FG I +V+ D +G+S+G GFV +S P AS A+ MNG+++ + L V VA
Sbjct: 318 LPFGQIVRSRVVDDCFTGLSQGYGFVKYSDPRCASEAIKRMNGRLVEGRALEVRVA 373
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 108/247 (43%), Gaps = 48/247 (19%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
+LYVG + ++T+ Q DLF G+V+ R+ R +R YG V + NP+ AA A+D
Sbjct: 680 NLYVGRVPSSLTEDQFIDLFRPFGRVVQARMFR---FQR---YGMVRFDNPSCAAAAIDH 733
Query: 91 LNFTPLNNK--SIRI-----------------MYSHRDPSIRKSGTGNIFIKNLDKSIDH 131
L+ + ++R+ M S+ I + N+++ +L +++
Sbjct: 734 LDGYQIGGSILAVRVAGLPAESNAAKGALTSQMSSNEQGQIDMT---NLYVSHLPSYVNN 790
Query: 132 KALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQV-- 188
+ L D F G I K+ + +G SKGFGFV+F + SA A+ +NG ++ +
Sbjct: 791 ERLIDLFLPCGQITQAKVVVERYTGVSKGFGFVKFADAYSAAVALTHMNGYPLDGHVLEV 850
Query: 189 ----------------FVGHF-LRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGE 231
F HF + + V I T + + +TT E+L ++
Sbjct: 851 RIAGVHPDAMSSYMAHFYSHFTMHDPAKAAVGIPTSYWPHYYDESAYNTTAENLGQVTTT 910
Query: 232 YGTITSA 238
T SA
Sbjct: 911 SATDASA 917
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 50/111 (45%), Gaps = 8/111 (7%)
Query: 26 QFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAA 85
Q T+LYV L V + +L DLF GQ+ +V + T S G+G+V +A+ AA
Sbjct: 773 QIDMTNLYVSHLPSYVNNERLIDLFLPCGQITQAKVVVERYTGVSKGFGFVKFADAYSAA 832
Query: 86 RALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHD 136
AL +N PL+ + + + P S + + H +HD
Sbjct: 833 VALTHMNGYPLDGHVLEVRIAGVHPDAMSSYMAHFY--------SHFTMHD 875
>gi|89266927|emb|CAJ82281.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [Xenopus (Silurana) tropicalis]
Length = 374
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 93/309 (30%), Positives = 148/309 (47%), Gaps = 50/309 (16%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
T+L V L N+T +L LF +G++ S ++ RD T +SLGYG+VNY +P DA +A++
Sbjct: 67 TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAIN 126
Query: 90 VLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKI 149
LN L K+I++ Y+ PS N+++ L K++ K L FS +G I++ +I
Sbjct: 127 TLNGLRLQTKTIKVSYAR--PSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRI 184
Query: 150 ATDG-SGQSKGFGFVQFENKESAQNAIDKLNGM------------LINDKQVFVGHFLRK 196
D +G S+G GF++F+ + A+ AI LNG N+ V H +
Sbjct: 185 LVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKVNHTILS 244
Query: 197 QERET-----------VAIKTKFN-----------------------NVFVKNLDESTTD 222
Q ++ A + +F+ +FV NL +
Sbjct: 245 QLYQSPNRRYPGPLAQQAQRFRFSPMTIDGMTSLAGINFPGHAGTGWCIFVYNLAPDADE 304
Query: 223 EDLKKIFGEYGTITSAVVMRD-GDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYV 281
L ++FG +G +T+ V+RD K K FGFV N D+AA A+ +LNG + DR V
Sbjct: 305 SILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQV 364
Query: 282 GKAQKKSER 290
K+ +
Sbjct: 365 SFKTSKTHK 373
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 174/379 (45%), Gaps = 48/379 (12%)
Query: 57 LSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNN-----KSIRIMYSHRDPS 111
++VR+C S RS + + AA + N NN +I S + S
Sbjct: 1 MAVRLCDVASLLRSGSWAAEPWTGQVIAAMETQLSNGPTCNNTANCPNTINNCSSPVESS 60
Query: 112 IRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKES 170
+ N+ + L +++ + L F S G I SCK+ D +GQS G+GFV + + +
Sbjct: 61 NTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 120
Query: 171 AQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFG 230
A+ AI+ LNG+ + K + V + + +I+ N++V L ++ T ++L+++F
Sbjct: 121 AEKAINTLNGLRLQTKTIKVSY----ARPSSASIRDA--NLYVSGLPKTMTQKELEQLFS 174
Query: 231 EYG-TITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKK--FDDREWYVGKAQKK 287
+YG ITS +++ G S+ GF+ F+ +A +A++ LNG+K V A
Sbjct: 175 QYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNP 234
Query: 288 SER----------------------EQELKGQFEQAMKETVDKFQGLN----------LY 315
S++ +Q + +F + + G+N ++
Sbjct: 235 SQKVNHTILSQLYQSPNRRYPGPLAQQAQRFRFSPMTIDGMTSLAGINFPGHAGTGWCIF 294
Query: 316 IKNLGDSIDDEKLKELFSEFGTITSCKVMRD-PSGISKGSGFVAFSTPEEASRALAEMNG 374
+ NL D+ L ++F FG +T+ KV+RD + KG GFV + +EA+ A+A +NG
Sbjct: 295 VYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 354
Query: 375 KMIVSKPLYVAVAQRKEER 393
+ + L V+ K +
Sbjct: 355 YRLGDRVLQVSFKTSKTHK 373
>gi|440293231|gb|ELP86374.1| polyadenylate-binding protein, cytoplasmic and nuclear, putative
[Entamoeba invadens IP1]
Length = 538
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/352 (28%), Positives = 173/352 (49%), Gaps = 25/352 (7%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQV--GQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+++V L NVT+S LY S QV SV V R+ ++ Y VN A +A+
Sbjct: 14 TVFVSGLTKNVTESLLYKEISAKFESQVASVHVSRNEHYDTAIAY--VNMNTHEAAKKAI 71
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
+ +N ++ K + + +S +D R N+F+KN+ K++ K + D F +FG I+S K
Sbjct: 72 ETMNGALIDGKPVNMFWSLKDFKQRTETQTNLFVKNIKKTVSQKEMQDVFMTFGEIISVK 131
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKF 208
++ + +G S GFG+V++ E+A A++ N I K + K E++T K K
Sbjct: 132 LSVNENGASNGFGYVKYRTIEAALKAVE--NAAEIKAKIGEDNFIVAKFEKQT---KNKK 186
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITS------AVVMRDGDGKSKCFGFVNFENADDA 262
N++V N+D+S +E K F +G + V+ D GFV+FEN +DA
Sbjct: 187 TNLYVSNIDKSVNEEQFVKYFETFGPLRKNPDNKFQVLFASKDEYPTAMGFVDFENEEDA 246
Query: 263 AKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGD- 321
KA+ A E V K ER++E + + + M K++ N+Y+K D
Sbjct: 247 QKALTAPKNNVLGQGEIKVVYYMSKKERKREYQLKNNEIMASIKGKYKEFNMYVKTSNDS 306
Query: 322 --SIDDEKLKELFSEFGTITSCKVM---RDPSGISKGSGFVAFSTPEEASRA 368
S D +++ F++ G I S ++ + P+ ++ +V F++ E +A
Sbjct: 307 EHSTSDAEIRSAFADCGEIYSIRIKYFNKSPTDVA----YVCFTSQEGYDKA 354
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 111/236 (47%), Gaps = 37/236 (15%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
T+L+V ++ V+ ++ D+F G+++SV++ + S G+GYV Y A +A++
Sbjct: 101 TNLFVKNIKKTVSQKEMQDVFMTFGEIISVKLSVN-ENGASNGFGYVKYRTIEAALKAVE 159
Query: 90 VLNFTPLNNKSIRIMYSHRDPSI------RKSGTGNIFIKNLDKSIDHKALHDTFSSFG- 142
N I+ + + K+ N+++ N+DKS++ + F +FG
Sbjct: 160 -------NAAEIKAKIGEDNFIVAKFEKQTKNKKTNLYVSNIDKSVNEEQFVKYFETFGP 212
Query: 143 ------NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRK 196
N A+ + GFV FEN+E AQ A+ ++ ++ V +++ K
Sbjct: 213 LRKNPDNKFQVLFASKDEYPT-AMGFVDFENEEDAQKALTAPKNNVLGQGEIKVVYYMSK 271
Query: 197 QERE----------TVAIKTKFN--NVFVK---NLDESTTDEDLKKIFGEYGTITS 237
+ER+ +IK K+ N++VK + + ST+D +++ F + G I S
Sbjct: 272 KERKREYQLKNNEIMASIKGKYKEFNMYVKTSNDSEHSTSDAEIRSAFADCGEIYS 327
>gi|407035071|gb|EKE37514.1| polyadenylate-binding protein, putative [Entamoeba nuttalli P19]
Length = 524
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 135/564 (23%), Positives = 250/564 (44%), Gaps = 85/564 (15%)
Query: 31 SLYVGDLDFNVTDSQLY-DLFSQV-GQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+++V +L +VT++ L+ ++F QV +V + RD +R Y+N + A +A+
Sbjct: 20 TIFVNNLPTSVTETVLFAEVFKDFPNQVSNVHINRD--SRFDTTIAYINMNSHEAALQAI 77
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
LN T + K + + +S RD R N+++K + KS+ + L + F +G+ LS K
Sbjct: 78 KKLNGTLIEGKKVNMFWSLRDFKQRTQNETNLYVKYIKKSVTQQKLQEVFEKYGHTLSVK 137
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGML--INDKQVFVGHFLRKQERETVAIKT 206
++++ +S GFG+V++ E Q A+D + + I D+ + F ++ + +KT
Sbjct: 138 LSSNEKNESNGFGYVKYCTVEECQAAVDARDEIAKEIGDEGFLIAKFCKQPKN----LKT 193
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGK-----------SKCFGFVN 255
N+++ N+D++ T+E K F +G I DGK K GFVN
Sbjct: 194 ---NLYIGNIDKTVTEEQFLKYFETFGPIKCG-----ADGKKFYRFLYDEKYEKNKGFVN 245
Query: 256 FENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLY 315
+EN +DA KAV A D + V + K ER+QE K + K++ N +
Sbjct: 246 YENTEDAQKAVTAPRHCVLGDSDILVTYYKTKKERKQEFKQHANEIKMNATGKYKEYNFH 305
Query: 316 IKNLGDSIDDEKLKELFSEFGTITSCK---VMRDPSGISKGSGFVAFSTPEEASRALAEM 372
+K I + ++++ + G I S K V +P+ + ++ F + A + + +
Sbjct: 306 VKTDKAGITEGEIRDALQDCGGIYSIKIKYVNSEPTDVV----YICFDNAQSAHQFIQKA 361
Query: 373 NGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFL 432
+ P + K+ER S G +P G FL
Sbjct: 362 QVLGWTANPF-----KTKQER--------SSANNYYNGTGIP-----------GFPVNFL 397
Query: 433 -YGQAPPAIIPPQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVG 491
Y Q P++ M R P N Q P ++ A + I ++ S+
Sbjct: 398 QYFQLFPSVFNTSMN------RQPKPGNKQ--PRNVSASQNAKKKSKVDNNIKKQSKSIE 449
Query: 492 QPMPITALSTALANASPEQQRTLLGESLYPL---VEQLERDAAAKVTGMLLE-MDQTEVL 547
+ +T E+ + LG+ LY +E + + ++TG+LLE ++ +E+
Sbjct: 450 KAPTVT-----------EEMKNNLGDQLYDFILGIEDYDEEITGRITGVLLESIEYSELN 498
Query: 548 HLLESP-EALKAKVAEAMEVLRSV 570
++L++ E LK+ + E E L+ +
Sbjct: 499 NMLKNKIEELKSVIKEVHENLKKI 522
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 85/182 (46%), Gaps = 18/182 (9%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
T+LYV + +VT +L ++F + G LSV++ + S G+GYV Y + A+D
Sbjct: 107 TNLYVKYIKKSVTQQKLQEVFEKYGHTLSVKLSSN-EKNESNGFGYVKYCTVEECQAAVD 165
Query: 90 VLN--FTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSC 147
+ + ++ I + P K+ N++I N+DK++ + F +FG I
Sbjct: 166 ARDEIAKEIGDEGFLIAKFCKQPKNLKT---NLYIGNIDKTVTEEQFLKYFETFGPI--- 219
Query: 148 KIATDG---------SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQE 198
K DG K GFV +EN E AQ A+ ++ D + V ++ K+E
Sbjct: 220 KCGADGKKFYRFLYDEKYEKNKGFVNYENTEDAQKAVTAPRHCVLGDSDILVTYYKTKKE 279
Query: 199 RE 200
R+
Sbjct: 280 RK 281
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 65/173 (37%), Gaps = 26/173 (15%)
Query: 28 LTTSLYVGDLDFNVTDSQLYDLFSQVGQVLS-------VRVCRDLSTRRSLGYGYVNYAN 80
L T+LY+G++D VT+ Q F G + R D ++ G+VNY N
Sbjct: 191 LKTNLYIGNIDKTVTEEQFLKYFETFGPIKCGADGKKFYRFLYDEKYEKNK--GFVNYEN 248
Query: 81 PADAARALDVLNFTPLNNKSIRIMY-----------SHRDPSIRKSGTG-----NIFIKN 124
DA +A+ L + I + Y I+ + TG N +K
Sbjct: 249 TEDAQKAVTAPRHCVLGDSDILVTYYKTKKERKQEFKQHANEIKMNATGKYKEYNFHVKT 308
Query: 125 LDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDK 177
I + D G I S KI S + ++ F+N +SA I K
Sbjct: 309 DKAGITEGEIRDALQDCGGIYSIKIKYVNS-EPTDVVYICFDNAQSAHQFIQK 360
>gi|50290407|ref|XP_447635.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526945|emb|CAG60572.1| unnamed protein product [Candida glabrata]
Length = 602
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 107/418 (25%), Positives = 190/418 (45%), Gaps = 66/418 (15%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
+L+VG+L +T +L ++F +S +VC + RSLG+GY+N+ N DA RA +
Sbjct: 65 ALFVGNLAEEITSERLTEMFKVYKSFISAKVCTNADDNRSLGHGYINFGNKEDAERATED 124
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNL---DKSIDHKALHDTFSSFGNILSC 147
N+ + K IRIM S RD RK+ NIF NL + + H+ +D F +GN+LS
Sbjct: 125 FNYNKIMGKEIRIMPSIRDSVYRKNFGTNIFFSNLPLQKEKLTHRMFYDIFRKYGNVLSV 184
Query: 148 KIATDGSGQSKGFGFVQFENKESAQNAIDKLN-----GMLIN------------------ 184
K+ + SK GFV FE+ A++ I + N G +I+
Sbjct: 185 KLDS-----SKNIGFVYFEDDTIARDVIKEFNNKEFLGNIISCGLHFDKELRKKPNFDKQ 239
Query: 185 ------------DKQVFVGHFLR-KQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGE 231
+K++F + + K +++ VAI + N +F+KNL T + ++ IF E
Sbjct: 240 ISKLDDDIIIEKEKEIFDSNKVEIKIDKDKVAI-IQPNGIFIKNLPLDTNNNEILAIFSE 298
Query: 232 YGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSERE 291
G I S + + + + FV +++ KA+ NGK +R +V A K
Sbjct: 299 VGPIKSVFLSPLNESREYLWAFVTYKDKASVEKAISLFNGKAIGNRNVFVTHAYSK---- 354
Query: 292 QELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTI-TSCKVMR--DPS 348
+ + + L++ NL D + LK++ ++ KV + +P
Sbjct: 355 ------YNIPTPKPI-------LFLSNLSPICDRKFLKQIMNQLSVKPEDIKVHQSENPE 401
Query: 349 GISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRP 406
++ +G + F T ++ +A +N K++ +Y + K+ + +F Q+ P
Sbjct: 402 HVT-STGTIQFKTQDDLDKAKKFLNNKLVSGSIIYATTRKSKKNQEQTNYREFCQILP 458
>gi|134026264|gb|AAI36135.1| ELAV (embryonic lethal, abnormal vision)-like 3 (Hu antigen C)
[Xenopus (Silurana) tropicalis]
Length = 342
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/315 (29%), Positives = 152/315 (48%), Gaps = 58/315 (18%)
Query: 12 MSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSL 71
++G NG A + T+L V L N+T + LF +G++ S ++ RD T +SL
Sbjct: 23 LNGTNGAADDSK------TNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQSL 76
Query: 72 GYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSH-RDPSIRKSGTGNIFIKNLDKSID 130
GYG+VNY +P DA +A++ LN L K+I++ Y+ SIR + N+++ +L K+++
Sbjct: 77 GYGFVNYVDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDA---NLYVSSLPKTMN 133
Query: 131 HKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKLNGM-------- 181
K + FS +G I++ +I D +G S+G GF++F+ + A+ AI LNG
Sbjct: 134 QKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGASEP 193
Query: 182 ----LIND-----KQVFVGHFLRKQERET---------------VAIKTKFN-------- 209
N+ Q + H + R + I + N
Sbjct: 194 ITVKFANNPSQKTGQALLTHLYQTTARRYTGPLHHQTQRFRFSPITIDSVTNLAGVSLTG 253
Query: 210 ------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD-GDGKSKCFGFVNFENADDA 262
+FV NL + L ++FG +G +T+ V+RD K K FGFV N D+A
Sbjct: 254 PTTAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEA 313
Query: 263 AKAVEALNGKKFDDR 277
A A+ +LNG + DR
Sbjct: 314 AMAIASLNGYRLGDR 328
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 152/312 (48%), Gaps = 43/312 (13%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDK 177
N+ + L +++ + F S G I SCK+ D +GQS G+GFV + + A AI+
Sbjct: 36 NLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPNDADKAINT 95
Query: 178 LNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYG-TIT 236
LNG+ + K + V + + +I+ N++V +L ++ ++++++F +YG IT
Sbjct: 96 LNGLKLQTKTIKVSY----ARPSSASIRDA--NLYVSSLPKTMNQKEMEQLFSQYGRIIT 149
Query: 237 SAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKK------------FDDREWYVGKA 284
S +++ G S+ GF+ F+ +A +A++ LNG+K ++ G+A
Sbjct: 150 SRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGASEPITVKFANNPSQKTGQA 209
Query: 285 ------QKKSER------EQELKGQFEQAMKETVDKFQGLNL----------YIKNLGDS 322
Q + R Q + +F ++V G++L ++ NL
Sbjct: 210 LLTHLYQTTARRYTGPLHHQTQRFRFSPITIDSVTNLAGVSLTGPTTAGWCIFVYNLSPE 269
Query: 323 IDDEKLKELFSEFGTITSCKVMRD-PSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKP 381
D+ L +LF FG +T+ KV+RD + KG GFV + +EA+ A+A +NG + +
Sbjct: 270 ADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRV 329
Query: 382 LYVAVAQRKEER 393
L V+ K+ +
Sbjct: 330 LQVSFKTSKQHK 341
Score = 46.2 bits (108), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 42/74 (56%)
Query: 32 LYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVL 91
++V +L +S L+ LF G V +V+V RD +T + G+G+V N +AA A+ L
Sbjct: 261 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 320
Query: 92 NFTPLNNKSIRIMY 105
N L ++ +++ +
Sbjct: 321 NGYRLGDRVLQVSF 334
>gi|403339745|gb|EJY69134.1| Polyadenylate-binding protein, cytoplasmic and nuclear [Oxytricha
trifallax]
Length = 593
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 137/513 (26%), Positives = 226/513 (44%), Gaps = 84/513 (16%)
Query: 117 TGNIFIKNLDKSIDHKALHDTFSS-FGN--ILSCKIATDGSGQSKGFGFVQFENKESAQN 173
T + +KNLDKSI + L + F+ FG+ +LS K++ + S+G+GFVQF + A+
Sbjct: 103 TNFLLVKNLDKSITSQQLDEIFAKVFGDDAVLSAKVSINSDYSSRGYGFVQFACPQLAEQ 162
Query: 174 AIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYG 233
A+ K + + ++ + ++E ++ FNN+++KN + E +++IFG+YG
Sbjct: 163 ALAKASEF---NFEISTHQPMNREE-----LRKTFNNIYIKNFPSNWNKEKIEEIFGQYG 214
Query: 234 TITSAVVMR---DGDGKSKCFGFVNFENADD-------AAKAVEALNGKKFDDREWYVGK 283
TI S VVM G + F FV +E+ D+ A A+ N K++D + V +
Sbjct: 215 TIKSTVVMMGKVQGTDQEAPFAFVCYEDPDNKEYGPKCAQNAITQENDKEYDGFKLQVKE 274
Query: 284 AQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKV 343
A KS REQE Q EQ + K NLY+KN ++ ++E+LK F ++G I K+
Sbjct: 275 ALPKSLREQE--KQREQNRLKNSKK--RCNLYVKNFPENTNEEQLKAYFEKYGEIERIKL 330
Query: 344 MRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERR-----ARLQ 398
+ FV + PE A+ A + + + K L++ ++KE R+ AR +
Sbjct: 331 IHKEGAAV--YAFVCYKNPESATYAKQQSQTQTLNGKQLFLNFYEQKEVRKIQQEDARDR 388
Query: 399 AQFSQMRPVAMGPSVPPRMPMYPPG-------------------------------PSGL 427
F +R + ++ M P G
Sbjct: 389 TDFQNLRKQSPTSALNIDMLNRPETFQLLQYLMITIQRQQQNQRYNNPQRQGGNMQQRGP 448
Query: 428 GQQFL----YGQAPPAIIPPQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPV----PVDM 479
QQ+ Y Q + QMPP R P P M + M + P M
Sbjct: 449 RQQYNNQGGYQQRNQQLPQGQMPPMNQQMRQPQQ------PVIMPSQVMPALAQVAPSAM 502
Query: 480 GAGIPRRDASVGQPMPITALSTA--LANASPEQQRTLLGESLYPLVEQLE-RDAAAKVTG 536
+P + Q +S L +A ++ +GE +Y VE+L D A K+TG
Sbjct: 503 NQNLPPHILTYNQ----NGMSKIFPLVSALNPNYKSQVGEFIYEHVEELAGEDLAPKITG 558
Query: 537 MLLEMDQTEVLHLLESPEALKAKVAEAMEVLRS 569
ML+++ E+ + LK K+ EA +L+S
Sbjct: 559 MLIDLPIVEIQAYVTDFMKLKIKINEASTLLKS 591
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 136/284 (47%), Gaps = 57/284 (20%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQV---GQVLSVRVC--RDLSTRRSLGYGYVNYANPAD 83
T L V +LD ++T QL ++F++V VLS +V D S+R GYG+V +A P
Sbjct: 103 TNFLLVKNLDKSITSQQLDEIFAKVFGDDAVLSAKVSINSDYSSR---GYGFVQFACPQL 159
Query: 84 AARAL--------DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALH 135
A +AL ++ P+N + +R ++ NI+IKN + + + +
Sbjct: 160 AEQALAKASEFNFEISTHQPMNREELRKTFN------------NIYIKNFPSNWNKEKIE 207
Query: 136 DTFSSFGNILSCKI---ATDGSGQSKGFGFVQFE---NKE----SAQNAIDKLN-----G 180
+ F +G I S + G+ Q F FV +E NKE AQNAI + N G
Sbjct: 208 EIFGQYGTIKSTVVMMGKVQGTDQEAPFAFVCYEDPDNKEYGPKCAQNAITQENDKEYDG 267
Query: 181 MLINDKQVFVGHFLRKQE--RETVAIKT--KFNNVFVKNLDESTTDEDLKKIFGEYGTIT 236
+ K+ LR+QE RE +K K N++VKN E+T +E LK F +YG I
Sbjct: 268 FKLQVKEALPKS-LREQEKQREQNRLKNSKKRCNLYVKNFPENTNEEQLKAYFEKYGEIE 326
Query: 237 S-AVVMRDGDGKSKCFGFVNFENADDAAKA-----VEALNGKKF 274
++ ++G + + FV ++N + A A + LNGK+
Sbjct: 327 RIKLIHKEG---AAVYAFVCYKNPESATYAKQQSQTQTLNGKQL 367
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 77/167 (46%), Gaps = 34/167 (20%)
Query: 207 KFNNVFVKNLDESTT----DEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDA 262
K N + VKNLD+S T DE K+FG+ + SA V + D S+ +GFV F A
Sbjct: 102 KTNFLLVKNLDKSITSQQLDEIFAKVFGD-DAVLSAKVSINSDYSSRGYGFVQFACPQLA 160
Query: 263 AKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDS 322
+A+ + F+ + RE EL+ F N+YIKN +
Sbjct: 161 EQALAKASEFNFE------ISTHQPMNRE-ELRKTFN-------------NIYIKNFPSN 200
Query: 323 IDDEKLKELFSEFGTITSCKVMRDPSGISKGS------GFVAFSTPE 363
+ EK++E+F ++GTI S VM G +G+ FV + P+
Sbjct: 201 WNKEKIEEIFGQYGTIKSTVVM---MGKVQGTDQEAPFAFVCYEDPD 244
>gi|348509181|ref|XP_003442130.1| PREDICTED: ELAV-like protein 3-like isoform 1 [Oreochromis
niloticus]
gi|410902663|ref|XP_003964813.1| PREDICTED: ELAV-like protein 3-like isoform 1 [Takifugu rubripes]
gi|432868072|ref|XP_004071397.1| PREDICTED: ELAV-like protein 3-like isoform 1 [Oryzias latipes]
Length = 345
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 151/313 (48%), Gaps = 53/313 (16%)
Query: 15 PNGVAAGASGNQFLT-TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGY 73
PNG +G+ + T+L V L N+T + LF +G++ S ++ RD T +SLGY
Sbjct: 22 PNGPVISTNGSTDDSKTNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQSLGY 81
Query: 74 GYVNYANPADAARALDVLNFTPLNNKSIRIMYSH-RDPSIRKSGTGNIFIKNLDKSIDHK 132
G+VNY +P DA +A++ LN L K+I++ Y+ SIR + N+++ L K++ K
Sbjct: 82 GFVNYVDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDA---NLYVSGLPKTMSQK 138
Query: 133 ALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKLNGM---------- 181
+ FS +G I++ +I D +G S+G GF++F+ + A+ AI LNG
Sbjct: 139 DMEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRNEAEEAIKGLNGQKPLGAAEPIT 198
Query: 182 --LINDKQVFVGHFLRKQERETVAIKT-----------KFN------------------- 209
N+ G L Q +T A + +F+
Sbjct: 199 VKFANNPSQKTGQALLTQLYQTAARRYTGPLHHQTQRFRFSPITIDSMTSLAGVNLTGPT 258
Query: 210 ----NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD-GDGKSKCFGFVNFENADDAAK 264
+FV NL + L ++FG +G +T+ V+RD K K FGFV N D+AA
Sbjct: 259 GAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAM 318
Query: 265 AVEALNGKKFDDR 277
A+ +LNG + DR
Sbjct: 319 AIASLNGYRLGDR 331
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 153/312 (49%), Gaps = 43/312 (13%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDK 177
N+ + L +++ + F S G I SCK+ D +GQS G+GFV + + A AI+
Sbjct: 39 NLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPNDADKAINT 98
Query: 178 LNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYG-TIT 236
LNG+ + K + V + + +I+ N++V L ++ + +D++++F +YG IT
Sbjct: 99 LNGLKLQTKTIKVSY----ARPSSASIRDA--NLYVSGLPKTMSQKDMEQLFSQYGRIIT 152
Query: 237 SAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKK------------FDDREWYVGKA 284
S +++ G S+ GF+ F+ ++A +A++ LNG+K ++ G+A
Sbjct: 153 SRILVDQVTGISRGVGFIRFDKRNEAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQA 212
Query: 285 ------QKKSER------EQELKGQFEQAMKETVDKFQGLNL----------YIKNLGDS 322
Q + R Q + +F +++ G+NL ++ NL
Sbjct: 213 LLTQLYQTAARRYTGPLHHQTQRFRFSPITIDSMTSLAGVNLTGPTGAGWCIFVYNLSPE 272
Query: 323 IDDEKLKELFSEFGTITSCKVMRD-PSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKP 381
D+ L +LF FG +T+ KV+RD + KG GFV + +EA+ A+A +NG + +
Sbjct: 273 ADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRV 332
Query: 382 LYVAVAQRKEER 393
L V+ K+ +
Sbjct: 333 LQVSFKTSKQHK 344
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 103/203 (50%), Gaps = 24/203 (11%)
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENADDAAKAVEA 268
N+ V L ++ T E+ K +FG G I S ++RD G+S +GFVN+ + +DA KA+
Sbjct: 39 NLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPNDADKAINT 98
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
LNG K + V A+ S ++ NLY+ L ++ + +
Sbjct: 99 LNGLKLQTKTIKVSYARPSSASIRD------------------ANLYVSGLPKTMSQKDM 140
Query: 329 KELFSEFGTITSCKVMRDP-SGISKGSGFVAFSTPEEASRALAEMNGK--MIVSKPLYVA 385
++LFS++G I + +++ D +GIS+G GF+ F EA A+ +NG+ + ++P+ V
Sbjct: 141 EQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRNEAEEAIKGLNGQKPLGAAEPITVK 200
Query: 386 VAQRKEERRARLQAQFSQMRPVA 408
A ++ QA +Q+ A
Sbjct: 201 FANNPSQKTG--QALLTQLYQTA 221
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 10/94 (10%)
Query: 12 MSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSL 71
++GP G ++V +L +S L+ LF G V +V+V RD +T +
Sbjct: 254 LTGPTGAGW----------CIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCK 303
Query: 72 GYGYVNYANPADAARALDVLNFTPLNNKSIRIMY 105
G+G+V N +AA A+ LN L ++ +++ +
Sbjct: 304 GFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSF 337
>gi|50302861|ref|XP_451368.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640499|emb|CAH02956.1| KLLA0A08338p [Kluyveromyces lactis]
Length = 766
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/383 (27%), Positives = 180/383 (46%), Gaps = 50/383 (13%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
T+L++GDL NVT+ L+++F++ SV++C D +T++SLGYGY+N+ +P DA A+D
Sbjct: 138 TALFIGDLPGNVTEDMLHNIFNKFKSFNSVKICVDSNTKKSLGYGYLNFGDPKDAENAVD 197
Query: 90 VLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNL---DKSIDHKALHDTFSSFGNILS 146
N+ P+ + IR+M S R+ RK+ N+F NL + + + +D F FG ILS
Sbjct: 198 EYNYMPIFGREIRMMPSLRNTYFRKNIGTNVFFSNLPLDNTKLTTRVFYDEFKKFGKILS 257
Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKT 206
CK+ + K GF+ FEN +A+ AI + NG D + G + R++ +
Sbjct: 258 CKL-----DRRKNIGFIYFENDAAAKEAIKQYNGKEFFDSTIMCGVHFDRNVRKSPEFEQ 312
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
K N + NL + + M D + V + +++ K V
Sbjct: 313 KINR--INNL----------------TVVKEKLEMEDDNN-------VTTDPSENGKKDV 347
Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVD-KFQGLN-LYIKNLGDSID 324
A N DD + VG A K E+ KE+ + K N +++KNL +
Sbjct: 348 VAGNDTDDDDDDKAVGNA---------TKSLVEETNKESKNTKLPHPNAIFVKNLPINPS 398
Query: 325 DEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYV 384
+ L FS+ G + S D S F+ + ++ A+ ++NG + + + V
Sbjct: 399 HDNLLNFFSKIGPVKSV-YTSDVSKFDSSWAFITYKRIQDTKTAIEKLNGCKYMKRTIEV 457
Query: 385 AVAQRKEERRARLQAQF-SQMRP 406
+K ER ++QF + RP
Sbjct: 458 ----KKTERHHLEESQFENNTRP 476
Score = 46.2 bits (108), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 9/170 (5%)
Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
N +FVKNL + + ++L F + G + S V D + F+ ++ D A+E
Sbjct: 386 NAIFVKNLPINPSHDNLLNFFSKIGPVKS-VYTSDVSKFDSSWAFITYKRIQDTKTAIEK 444
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
LNG K+ R V KK+ER + QFE + K +++ NL ++E L
Sbjct: 445 LNGCKYMKRTIEV----KKTERHHLEESQFENNTRPNNYK---KTVFLTNLSVICNEEFL 497
Query: 329 KELFSEFGTITSCKVMR-DPSGISKGSGFVAFSTPEEASRALAEMNGKMI 377
L + T V+R SG+V ++ +A R M K++
Sbjct: 498 NFLCGQERIKTERVVVRYYEEKTDTYSGYVRCASRNDAQRLFELMENKLL 547
>gi|168018575|ref|XP_001761821.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686876|gb|EDQ73262.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 153
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/145 (58%), Positives = 108/145 (74%), Gaps = 8/145 (5%)
Query: 452 YRY-PLGRNMQDF--PFDMGAGSMLPVPVDMGAGIPRRDASVG---QPMPITALSTALAN 505
+RY P RN D P +MLPVP+++G G P + G QP+PI+AL++ALA+
Sbjct: 10 FRYIPNARNTPDVSVPPQGIINTMLPVPLEIG-GAPAANVDPGVPQQPLPISALASALAS 68
Query: 506 ASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAME 565
A P+QQR +LGE LYPLV+QLE D A KVTGMLLEMDQTEVLHL+ESP+ALKAKVAEAME
Sbjct: 69 APPDQQRAMLGEQLYPLVDQLEHDFAGKVTGMLLEMDQTEVLHLIESPDALKAKVAEAME 128
Query: 566 VLRSVAQQQANNPADQLASLSLNEN 590
VLR +AQ + P DQL +LS++++
Sbjct: 129 VLR-MAQAVPSAPTDQLGNLSISDS 152
>gi|90399074|emb|CAJ86296.1| H0124B04.13 [Oryza sativa Indica Group]
Length = 913
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/303 (32%), Positives = 152/303 (50%), Gaps = 15/303 (4%)
Query: 98 NKSIRIMYSHRDPSIRKSG-------TGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+K + H PS + G N+++ NL S+ L + F FG I+ ++
Sbjct: 182 DKHLHKKQEHTPPSFPQDGGKLKEVDNTNLYVGNLPASVGSHKLIELFLPFGQIVRSRVV 241
Query: 151 TDG-SGQSKGFGFVQFENKESAQNAIDKLNGMLINDK--QVFVGHFLRKQERETVAIK-T 206
D +G S+G+GFV++ + A AI ++NG L+ + +V V F ++ K T
Sbjct: 242 DDCFTGLSQGYGFVKYSDPRCASEAIKRMNGRLVEGRALEVRVAGFPSSEDNSQQPSKET 301
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGD-GKSKCFGFVNFENADDAAKA 265
++V NL S + L +F +G +T+A V +D G SK +GFV + + AA+A
Sbjct: 302 DMAKLYVCNLSLSMNTDRLIHLFLPFGEVTNAKVAKDHTTGLSKGYGFVQYSSPHHAAEA 361
Query: 266 VEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDD 325
V LNG+ D R+ V + S + TV + NLY+ N+ SID
Sbjct: 362 VIHLNGRLVDGRKIEVRVSGIPSTLPNS--AVESPSTTRTVKEIDMSNLYVCNMPSSIDT 419
Query: 326 EKLKELFSEFGTITSCKVMRDPSGIS-KGSGFVAFSTPEEASRALAEMNGKMIVSKPLYV 384
+KL ELF FG IT +V+ DP S KG GF+ F+ E A++A+A MNG ++ + + V
Sbjct: 420 KKLVELFLPFGKITHARVVADPDTFSAKGYGFIKFTDSESATKAIAAMNGALVGGEMIIV 479
Query: 385 AVA 387
VA
Sbjct: 480 RVA 482
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/378 (28%), Positives = 181/378 (47%), Gaps = 42/378 (11%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
T+LYVG+L +V +L +LF GQ++ RV D T S GYG+V Y++P A+ A+
Sbjct: 209 TNLYVGNLPASVGSHKLIELFLPFGQIVRSRVVDDCFTGLSQGYGFVKYSDPRCASEAIK 268
Query: 90 VLNFTPLNNKSIRIMYS--------HRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
+N + +++ + + + PS +++ +++ NL S++ L F F
Sbjct: 269 RMNGRLVEGRALEVRVAGFPSSEDNSQQPS-KETDMAKLYVCNLSLSMNTDRLIHLFLPF 327
Query: 142 GNILSCKIATD-GSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFV---------- 190
G + + K+A D +G SKG+GFVQ+ + A A+ LNG L++ +++ V
Sbjct: 328 GEVTNAKVAKDHTTGLSKGYGFVQYSSPHHAAEAVIHLNGRLVDGRKIEVRVSGIPSTLP 387
Query: 191 GHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKS-K 249
+ + +N++V N+ S + L ++F +G IT A V+ D D S K
Sbjct: 388 NSAVESPSTTRTVKEIDMSNLYVCNMPSSIDTKKLVELFLPFGKITHARVVADPDTFSAK 447
Query: 250 CFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKF 309
+GF+ F +++ A KA+ A+NG V + G A V
Sbjct: 448 GYGFIKFTDSESATKAIAAMNGALVGGEMIIV-----------RVAGLSPSASISAVQTT 496
Query: 310 QGLN---LYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEAS 366
Q +N LYI NL S+ +K+ LF+ FG IT KV+ ++ V ++ A
Sbjct: 497 QDINKSRLYITNLPRSMTADKMVNLFAPFGQIT--KVL-----MNLEYSLVWYADAPSAI 549
Query: 367 RALAEMNGKMIVSKPLYV 384
+A+ M+G M+ K L V
Sbjct: 550 KAVQHMDGYMVEGKRLVV 567
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 170/390 (43%), Gaps = 34/390 (8%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
++LYV ++ ++ +L +LF G++ RV D T + GYG++ + + A +A+
Sbjct: 406 SNLYVCNMPSSIDTKKLVELFLPFGKITHARVVADPDTFSAKGYGFIKFTDSESATKAIA 465
Query: 90 VLNFTPLNNKSIRIMYSHRDPSIRKSGT--------GNIFIKNLDKSIDHKALHDTFSSF 141
+N + + I + + PS S ++I NL +S+ + + F+ F
Sbjct: 466 AMNGALVGGEMIIVRVAGLSPSASISAVQTTQDINKSRLYITNLPRSMTADKMVNLFAPF 525
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
G I + + + V + + SA A+ ++G ++ K++ V ++ E T
Sbjct: 526 GQITKVLMNLE-------YSLVWYADAPSAIKAVQHMDGYMVEGKRLVV----KRSELCT 574
Query: 202 VAI---------KTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFG 252
+ N++V + S T++ +F +G + A + R + +G
Sbjct: 575 TNASQAGGKPIKEIDMANLYVGRVPSSLTEDQFIDLFRPFGRVVQARMFR-----FQRYG 629
Query: 253 FVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGL 312
V F+N AA A++ L+G + V A +E Q +
Sbjct: 630 MVRFDNPSCAAAAIDHLDGYQIGGSILAVRVAGLPAESNAAKGALTSQMSSNEQGQIDMT 689
Query: 313 NLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP-SGISKGSGFVAFSTPEEASRALAE 371
NLY+ +L +++E+L +LF G IT KV+ + +G+SKG GFV F+ A+ AL
Sbjct: 690 NLYVSHLPSYVNNERLIDLFLPCGQITQAKVVVERYTGVSKGFGFVKFADAYSAAVALTH 749
Query: 372 MNGKMIVSKPLYVAVAQRKEERRARLQAQF 401
MNG + L V +A + + A F
Sbjct: 750 MNGYPLDGHVLEVRIAGVHPDAMSSYMAHF 779
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 65/116 (56%), Gaps = 8/116 (6%)
Query: 273 KFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELF 332
+FDD++ ++ K Q+ + G +KE VD NLY+ NL S+ KL ELF
Sbjct: 177 QFDDQDKHLHKKQEHTPPSFPQDGG---KLKE-VDN---TNLYVGNLPASVGSHKLIELF 229
Query: 333 SEFGTITSCKVMRDP-SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 387
FG I +V+ D +G+S+G GFV +S P AS A+ MNG+++ + L V VA
Sbjct: 230 LPFGQIVRSRVVDDCFTGLSQGYGFVKYSDPRCASEAIKRMNGRLVEGRALEVRVA 285
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 108/247 (43%), Gaps = 48/247 (19%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
+LYVG + ++T+ Q DLF G+V+ R+ R +R YG V + NP+ AA A+D
Sbjct: 592 NLYVGRVPSSLTEDQFIDLFRPFGRVVQARMFR---FQR---YGMVRFDNPSCAAAAIDH 645
Query: 91 LNFTPLNNK--SIRI-----------------MYSHRDPSIRKSGTGNIFIKNLDKSIDH 131
L+ + ++R+ M S+ I + N+++ +L +++
Sbjct: 646 LDGYQIGGSILAVRVAGLPAESNAAKGALTSQMSSNEQGQIDMT---NLYVSHLPSYVNN 702
Query: 132 KALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQV-- 188
+ L D F G I K+ + +G SKGFGFV+F + SA A+ +NG ++ +
Sbjct: 703 ERLIDLFLPCGQITQAKVVVERYTGVSKGFGFVKFADAYSAAVALTHMNGYPLDGHVLEV 762
Query: 189 ----------------FVGHF-LRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGE 231
F HF + + V I T + + +TT E+L ++
Sbjct: 763 RIAGVHPDAMSSYMAHFYSHFTMHDPAKAAVGIPTSYWPHYYDESAYNTTAENLGQVTTT 822
Query: 232 YGTITSA 238
T SA
Sbjct: 823 SATDASA 829
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 50/111 (45%), Gaps = 8/111 (7%)
Query: 26 QFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAA 85
Q T+LYV L V + +L DLF GQ+ +V + T S G+G+V +A+ AA
Sbjct: 685 QIDMTNLYVSHLPSYVNNERLIDLFLPCGQITQAKVVVERYTGVSKGFGFVKFADAYSAA 744
Query: 86 RALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHD 136
AL +N PL+ + + + P S + + H +HD
Sbjct: 745 VALTHMNGYPLDGHVLEVRIAGVHPDAMSSYMAHFY--------SHFTMHD 787
>gi|363750089|ref|XP_003645262.1| hypothetical protein Ecym_2746 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888895|gb|AET38445.1| Hypothetical protein Ecym_2746 [Eremothecium cymbalariae
DBVPG#7215]
Length = 681
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 103/397 (25%), Positives = 180/397 (45%), Gaps = 58/397 (14%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
+L++GDLD VT+ L D F++ +S ++C D +T++SLGYGY+N++N DA R ++
Sbjct: 121 ALFIGDLDEKVTEKNLRDTFNKFDSFVSAKICIDSNTKKSLGYGYLNFSNEEDAERVIEE 180
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNL---DKSIDHKALHDTFSSFGNILSC 147
N+ P+ + +RIM S R+ RK+ N+F NL + ++ + +D F +G ILSC
Sbjct: 181 FNYIPIFGREVRIMPSLRNSFYRKNIGTNVFFSNLPLENLALTTRVFYDAFKKYGKILSC 240
Query: 148 KIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVG-HFLRKQER------- 199
K+ + K GFV FE SA+ AI + NG + G HF R +
Sbjct: 241 KL-----DRRKNIGFVYFEKDSSAKQAIAEYNGKQFYGNNILCGIHFDRNVRKSPEFEKR 295
Query: 200 -----ETVAIKTKF-------------------NNVFVKNLDESTTDEDLKKIFGEYGTI 235
+ +K N VF+KNL ++ + L F + G +
Sbjct: 296 KARLEDMTLVKESLVMDNNQEIPSGSKMKGPHPNAVFIKNLPLNSDSDLLLDYFSQIGPV 355
Query: 236 TSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQE-- 293
S + + + + F+ F+ DA A+++LN + R + +AQK + + +
Sbjct: 356 KS-IFTSNVSKLNSAWAFITFKKGSDAQDAIDSLNHSQLLGRTIELSRAQKNFQSDIDAA 414
Query: 294 ----------LKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKV 343
+K + + L +Y+ +L SI E+ + F I + ++
Sbjct: 415 NAGTGNTGGSIKSADSEGSSSQHNSSYKLTVYLSSLS-SICSEQFLQCFCAEERIKTKRI 473
Query: 344 ---MRDPSGISKGSGFVAFSTPEEASRALAEMNGKMI 377
D ++ SGFV T +A+R +N K++
Sbjct: 474 SIRFYDEDTLT-FSGFVQCQTRNDANRLFELLNDKLL 509
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 148/311 (47%), Gaps = 30/311 (9%)
Query: 101 IRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATD-GSGQSKG 159
+++ S P++ +FI +LD+ + K L DTF+ F + +S KI D + +S G
Sbjct: 103 VKLGRSKDSPTLTSKKLVALFIGDLDEKVTEKNLRDTFNKFDSFVSAKICIDSNTKKSLG 162
Query: 160 FGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQ-ERETVAIKTKFNNVFVKNLDE 218
+G++ F N+E A+ I++ N + I ++V + LR R+ + F+N+ ++NL
Sbjct: 163 YGYLNFSNEEDAERVIEEFNYIPIFGREVRIMPSLRNSFYRKNIGTNVFFSNLPLENL-- 220
Query: 219 STTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDRE 278
+ T F +YG I S + R K GFV FE A +A+ NGK+F
Sbjct: 221 ALTTRVFYDAFKKYGKILSCKLDR-----RKNIGFVYFEKDSSAKQAIAEYNGKQFYGNN 275
Query: 279 WYVG----KAQKKSEREQELKGQFEQA--MKETV-----------DKFQGLN---LYIKN 318
G + +KS ++ K + E +KE++ K +G + ++IKN
Sbjct: 276 ILCGIHFDRNVRKSPEFEKRKARLEDMTLVKESLVMDNNQEIPSGSKMKGPHPNAVFIKN 335
Query: 319 LGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIV 378
L + D + L + FS+ G + S + S ++ F+ F +A A+ +N ++
Sbjct: 336 LPLNSDSDLLLDYFSQIGPVKSI-FTSNVSKLNSAWAFITFKKGSDAQDAIDSLNHSQLL 394
Query: 379 SKPLYVAVAQR 389
+ + ++ AQ+
Sbjct: 395 GRTIELSRAQK 405
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 100/231 (43%), Gaps = 35/231 (15%)
Query: 211 VFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGK-SKCFGFVNFENADDAAKAVEAL 269
+F+ +LDE T+++L+ F ++ + SA + D + K S +G++NF N +DA + +E
Sbjct: 122 LFIGDLDEKVTEKNLRDTFNKFDSFVSAKICIDSNTKKSLGYGYLNFSNEEDAERVIEEF 181
Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL---GDSIDDE 326
N RE + + + S + + G N++ NL ++
Sbjct: 182 NYIPIFGREVRIMPSLRNSFYRKNI----------------GTNVFFSNLPLENLALTTR 225
Query: 327 KLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 386
+ F ++G I SCK+ R K GFV F A +A+AE NGK + +
Sbjct: 226 VFYDAFKKYGKILSCKLDR-----RKNIGFVYFEKDSSAKQAIAEYNGKQFYGNNILCGI 280
Query: 387 A----QRK----EERRARLQAQFSQMRPVAM--GPSVPPRMPMYPPGPSGL 427
RK E+R+ARL+ + M +P M P P+ +
Sbjct: 281 HFDRNVRKSPEFEKRKARLEDMTLVKESLVMDNNQEIPSGSKMKGPHPNAV 331
>gi|349732184|ref|NP_001025498.3| ELAV-like protein 2 [Xenopus (Silurana) tropicalis]
gi|288561906|sp|Q28GD4.2|ELAV2_XENTR RecName: Full=ELAV-like protein 2; AltName: Full=Protein ElrB
Length = 375
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/310 (30%), Positives = 145/310 (46%), Gaps = 51/310 (16%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
T+L V L N+T +L LF +G++ S ++ RD T +SLGYG+VNY +P DA +A++
Sbjct: 67 TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAIN 126
Query: 90 VLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKI 149
LN L K+I++ Y+ PS N+++ L K++ K L FS +G I++ +I
Sbjct: 127 TLNGLRLQTKTIKVSYAR--PSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRI 184
Query: 150 ATDG-SGQSKGFGFVQFENKESAQNAIDKLNGM------------LINDKQVFVGHFLRK 196
D +G S+G GF++F+ + A+ AI LNG N+ V H +
Sbjct: 185 LVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKVNHTILS 244
Query: 197 QERE-----------------------TVAIKTKFNNV------------FVKNLDESTT 221
Q + T+ T + FV NL
Sbjct: 245 QLYQSPNRRYPGPLAQQAQRFSRFSPMTIDGMTSLAGINFPGHAGTGWCIFVYNLAPDAD 304
Query: 222 DEDLKKIFGEYGTITSAVVMRD-GDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWY 280
+ L ++FG +G +T+ V+RD K K FGFV N D+AA A+ +LNG + DR
Sbjct: 305 ESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQ 364
Query: 281 VGKAQKKSER 290
V K+ +
Sbjct: 365 VSFKTSKTHK 374
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 96/384 (25%), Positives = 175/384 (45%), Gaps = 57/384 (14%)
Query: 57 LSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNN-----KSIRIMYSHRDPS 111
++VR+C S RS + + AA + N NN +I S + S
Sbjct: 1 MAVRLCDVASLLRSGSWAAEPWTGQVIAAMETQLSNGPTCNNTANCPNTINNCSSPVESS 60
Query: 112 IRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKES 170
+ N+ + L +++ + L F S G I SCK+ D +GQS G+GFV + + +
Sbjct: 61 NTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 120
Query: 171 AQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFG 230
A+ AI+ LNG+ + K + V + + +I+ N++V L ++ T ++L+++F
Sbjct: 121 AEKAINTLNGLRLQTKTIKVSY----ARPSSASIRDA--NLYVSGLPKTMTQKELEQLFS 174
Query: 231 EYG-TITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGK-----------KFDD-- 276
+YG ITS +++ G S+ GF+ F+ +A +A++ LNG+ KF +
Sbjct: 175 QYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNP 234
Query: 277 ----------------REWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLN------- 313
Y G ++++R +F + + G+N
Sbjct: 235 SQKVNHTILSQLYQSPNRRYPGPLAQQAQRFS----RFSPMTIDGMTSLAGINFPGHAGT 290
Query: 314 ---LYIKNLGDSIDDEKLKELFSEFGTITSCKVMRD-PSGISKGSGFVAFSTPEEASRAL 369
+++ NL D+ L ++F FG +T+ KV+RD + KG GFV + +EA+ A+
Sbjct: 291 GWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAI 350
Query: 370 AEMNGKMIVSKPLYVAVAQRKEER 393
A +NG + + L V+ K +
Sbjct: 351 ASLNGYRLGDRVLQVSFKTSKTHK 374
>gi|222629794|gb|EEE61926.1| hypothetical protein OsJ_16667 [Oryza sativa Japonica Group]
Length = 1011
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/312 (31%), Positives = 153/312 (49%), Gaps = 22/312 (7%)
Query: 98 NKSIRIMYSHRDPSIRKSG-------TGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+K + H PS + G N+++ NL S+ L + F FG I+ ++
Sbjct: 269 DKHLHKKQEHTPPSFPQDGGKLKEVDNTNLYVGNLPASVGSHKLIELFLPFGQIVRSRVV 328
Query: 151 TDG-SGQSKGFGFVQFENKESAQNAIDKLNGMLINDK--QVFVGHFLRKQERETVAIK-T 206
D +G S+G+GFV++ + A AI ++NG L+ + +V V F ++ K T
Sbjct: 329 DDCFTGLSQGYGFVKYSDPRCASEAIKRMNGRLVEGRALEVRVAGFPSSEDNSQQPSKET 388
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD-GDGKSKCFGFVNFENADDAAKA 265
++V NL S + L +F +G +T+A V +D G SK +GFV + + AA+A
Sbjct: 389 DMAKLYVCNLSLSMNTDRLIHLFLPFGEVTNAKVAKDHTTGLSKGYGFVQYSSPHHAAEA 448
Query: 266 VEALNGKKFDDREWYVG---------KAQKKSEREQELKGQFEQAMKETVDKFQGLNLYI 316
V LNG+ D R+ V + +S + TV + NLY+
Sbjct: 449 VIHLNGRLVDGRKIEVRVSGIPSTLPNSAVESPSTTRNSAVESPSTTRTVKEIDMSNLYV 508
Query: 317 KNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGIS-KGSGFVAFSTPEEASRALAEMNGK 375
N+ SID +KL ELF FG IT +V+ DP S KG GF+ F+ E A++A+A MNG
Sbjct: 509 CNMPSSIDTKKLVELFLPFGKITHARVVADPDTFSAKGYGFIKFTDSESATKAIAAMNGA 568
Query: 376 MIVSKPLYVAVA 387
++ + + V VA
Sbjct: 569 LVGGEMIIVRVA 580
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 106/389 (27%), Positives = 182/389 (46%), Gaps = 53/389 (13%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
T+LYVG+L +V +L +LF GQ++ RV D T S GYG+V Y++P A+ A+
Sbjct: 296 TNLYVGNLPASVGSHKLIELFLPFGQIVRSRVVDDCFTGLSQGYGFVKYSDPRCASEAIK 355
Query: 90 VLNFTPLNNKSIRIMYS--------HRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
+N + +++ + + + PS +++ +++ NL S++ L F F
Sbjct: 356 RMNGRLVEGRALEVRVAGFPSSEDNSQQPS-KETDMAKLYVCNLSLSMNTDRLIHLFLPF 414
Query: 142 GNILSCKIATD-GSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFV---------- 190
G + + K+A D +G SKG+GFVQ+ + A A+ LNG L++ +++ V
Sbjct: 415 GEVTNAKVAKDHTTGLSKGYGFVQYSSPHHAAEAVIHLNGRLVDGRKIEVRVSGIPSTLP 474
Query: 191 -----------GHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAV 239
+ + +N++V N+ S + L ++F +G IT A
Sbjct: 475 NSAVESPSTTRNSAVESPSTTRTVKEIDMSNLYVCNMPSSIDTKKLVELFLPFGKITHAR 534
Query: 240 VMRDGDG-KSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQF 298
V+ D D +K +GF+ F +++ A KA+ A+NG V + G
Sbjct: 535 VVADPDTFSAKGYGFIKFTDSESATKAIAAMNGALVGGEMIIV-----------RVAGLS 583
Query: 299 EQAMKETVDKFQGLN---LYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSG 355
A V Q +N LYI NL S+ +K+ LF+ FG IT KV+ ++
Sbjct: 584 PSASISAVQTTQDINKSRLYITNLPRSMTADKMVNLFAPFGQIT--KVL-----MNLEYS 636
Query: 356 FVAFSTPEEASRALAEMNGKMIVSKPLYV 384
V ++ A++A+ M+G M+ K L V
Sbjct: 637 LVWYADAPSATKAVQHMDGYMVEGKRLVV 665
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 170/390 (43%), Gaps = 34/390 (8%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
++LYV ++ ++ +L +LF G++ RV D T + GYG++ + + A +A+
Sbjct: 504 SNLYVCNMPSSIDTKKLVELFLPFGKITHARVVADPDTFSAKGYGFIKFTDSESATKAIA 563
Query: 90 VLNFTPLNNKSIRIMYSHRDPSIRKSGT--------GNIFIKNLDKSIDHKALHDTFSSF 141
+N + + I + + PS S ++I NL +S+ + + F+ F
Sbjct: 564 AMNGALVGGEMIIVRVAGLSPSASISAVQTTQDINKSRLYITNLPRSMTADKMVNLFAPF 623
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
G I + + + V + + SA A+ ++G ++ K++ V ++ E T
Sbjct: 624 GQITKVLMNLE-------YSLVWYADAPSATKAVQHMDGYMVEGKRLVV----KRSELCT 672
Query: 202 VAI---------KTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFG 252
+ N++V + S T++ +F +G + A + R + +G
Sbjct: 673 TNASQAGGKPIKEIDMANLYVGRVPSSLTEDQFIDLFRPFGRVVQARMFR-----FQRYG 727
Query: 253 FVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGL 312
V F+N AA A++ L+G + V A +E Q +
Sbjct: 728 MVRFDNPSCAAAAIDHLDGYQIGGSILAVRVAGLPAESNAAKGALTSQMSSNEQGQIDMT 787
Query: 313 NLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP-SGISKGSGFVAFSTPEEASRALAE 371
NLY+ +L +++E+L +LF G IT KV+ + +G+SKG GFV F+ A+ AL
Sbjct: 788 NLYVSHLPSYVNNERLIDLFLPCGQITQAKVVVERYTGVSKGFGFVKFADAYSAAVALTH 847
Query: 372 MNGKMIVSKPLYVAVAQRKEERRARLQAQF 401
MNG + L V +A + + A F
Sbjct: 848 MNGYPLDGHVLEVRIAGVHPDAMSSYMAHF 877
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 65/116 (56%), Gaps = 8/116 (6%)
Query: 273 KFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELF 332
+FDD++ ++ K Q+ + G +KE VD NLY+ NL S+ KL ELF
Sbjct: 264 QFDDQDKHLHKKQEHTPPSFPQDGG---KLKE-VDN---TNLYVGNLPASVGSHKLIELF 316
Query: 333 SEFGTITSCKVMRDP-SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 387
FG I +V+ D +G+S+G GFV +S P AS A+ MNG+++ + L V VA
Sbjct: 317 LPFGQIVRSRVVDDCFTGLSQGYGFVKYSDPRCASEAIKRMNGRLVEGRALEVRVA 372
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 108/247 (43%), Gaps = 48/247 (19%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
+LYVG + ++T+ Q DLF G+V+ R+ R +R YG V + NP+ AA A+D
Sbjct: 690 NLYVGRVPSSLTEDQFIDLFRPFGRVVQARMFR---FQR---YGMVRFDNPSCAAAAIDH 743
Query: 91 LNFTPLNNK--SIRI-----------------MYSHRDPSIRKSGTGNIFIKNLDKSIDH 131
L+ + ++R+ M S+ I + N+++ +L +++
Sbjct: 744 LDGYQIGGSILAVRVAGLPAESNAAKGALTSQMSSNEQGQIDMT---NLYVSHLPSYVNN 800
Query: 132 KALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQV-- 188
+ L D F G I K+ + +G SKGFGFV+F + SA A+ +NG ++ +
Sbjct: 801 ERLIDLFLPCGQITQAKVVVERYTGVSKGFGFVKFADAYSAAVALTHMNGYPLDGHVLEV 860
Query: 189 ----------------FVGHF-LRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGE 231
F HF + + V I T + + +TT E+L ++
Sbjct: 861 RIAGVHPDAMSSYMAHFYSHFTMHDPAKAAVGIPTSYWPHYYDESAYNTTAENLGQVTTT 920
Query: 232 YGTITSA 238
T SA
Sbjct: 921 SATDASA 927
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 50/111 (45%), Gaps = 8/111 (7%)
Query: 26 QFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAA 85
Q T+LYV L V + +L DLF GQ+ +V + T S G+G+V +A+ AA
Sbjct: 783 QIDMTNLYVSHLPSYVNNERLIDLFLPCGQITQAKVVVERYTGVSKGFGFVKFADAYSAA 842
Query: 86 RALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHD 136
AL +N PL+ + + + P S + + H +HD
Sbjct: 843 VALTHMNGYPLDGHVLEVRIAGVHPDAMSSYMAHFY--------SHFTMHD 885
>gi|213623456|gb|AAI69769.1| ElrC protein [Xenopus laevis]
Length = 341
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 145/297 (48%), Gaps = 52/297 (17%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
T+L V L N+T + LF +G++ S ++ RD T +SLGYG+VNY +P DA +A++
Sbjct: 34 TNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPNDADKAIN 93
Query: 90 VLNFTPLNNKSIRIMYSH-RDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
LN L K+I++ Y+ SIR + N+++ +L K+++ K + FS +G I++ +
Sbjct: 94 TLNGLKLQTKTIKVSYARPSSASIRDA---NLYVSSLPKTMNQKEMEQLFSQYGRIITSR 150
Query: 149 IATDG-SGQSKGFGFVQFENKESAQNAIDKLNGM------------LIND-----KQVFV 190
I D +G S+G GF++F+ + A+ AI LNG N+ Q +
Sbjct: 151 ILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGASEPITVKFANNPSQKTGQALL 210
Query: 191 GHFLRKQERET---------------VAIKTKFN--------------NVFVKNLDESTT 221
H + R + I + N +FV NL
Sbjct: 211 THLYQTTARRYTGPLHHQTQRFRFSPITIDSVTNLAGVSLTGPTTAGWCIFVYNLSPEAD 270
Query: 222 DEDLKKIFGEYGTITSAVVMRD-GDGKSKCFGFVNFENADDAAKAVEALNGKKFDDR 277
+ L ++FG +G +T+ V+RD K K FGFV N D+AA A+ +LNG + DR
Sbjct: 271 ESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDR 327
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 152/312 (48%), Gaps = 43/312 (13%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDK 177
N+ + L +++ + F S G I SCK+ D +GQS G+GFV + + A AI+
Sbjct: 35 NLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPNDADKAINT 94
Query: 178 LNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYG-TIT 236
LNG+ + K + V + + +I+ N++V +L ++ ++++++F +YG IT
Sbjct: 95 LNGLKLQTKTIKVSY----ARPSSASIRDA--NLYVSSLPKTMNQKEMEQLFSQYGRIIT 148
Query: 237 SAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKK------------FDDREWYVGKA 284
S +++ G S+ GF+ F+ +A +A++ LNG+K ++ G+A
Sbjct: 149 SRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGASEPITVKFANNPSQKTGQA 208
Query: 285 ------QKKSER------EQELKGQFEQAMKETVDKFQGLNL----------YIKNLGDS 322
Q + R Q + +F ++V G++L ++ NL
Sbjct: 209 LLTHLYQTTARRYTGPLHHQTQRFRFSPITIDSVTNLAGVSLTGPTTAGWCIFVYNLSPE 268
Query: 323 IDDEKLKELFSEFGTITSCKVMRD-PSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKP 381
D+ L +LF FG +T+ KV+RD + KG GFV + +EA+ A+A +NG + +
Sbjct: 269 ADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRV 328
Query: 382 LYVAVAQRKEER 393
L V+ K+ +
Sbjct: 329 LQVSFKTSKQHK 340
Score = 46.2 bits (108), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 42/75 (56%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++V +L +S L+ LF G V +V+V RD +T + G+G+V N +AA A+
Sbjct: 259 CIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIAS 318
Query: 91 LNFTPLNNKSIRIMY 105
LN L ++ +++ +
Sbjct: 319 LNGYRLGDRVLQVSF 333
>gi|165875543|gb|ABY68599.1| poly(A) binding protein cytoplasmic 1 [Ovis aries]
Length = 289
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 60/101 (59%), Positives = 82/101 (81%), Gaps = 1/101 (0%)
Query: 303 KETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTP 362
++ + ++QG+NLY+KNL D IDDE+L++ FS FGTITS KVM + G SKG GFV FS+P
Sbjct: 2 QDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSP 60
Query: 363 EEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQ 403
EEA++A+ EMNG+++ +KPLYVA+AQRKEER+A L Q+ Q
Sbjct: 61 EEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQ 101
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 61/93 (65%), Gaps = 1/93 (1%)
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEAL 269
N++VKNLD+ DE L+K F +GTITSA VM +G G+SK FGFV F + ++A KAV +
Sbjct: 12 NLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTEM 70
Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAM 302
NG+ + YV AQ+K ER+ L Q+ Q M
Sbjct: 71 NGRIVATKPLYVALAQRKEERQAHLTNQYMQRM 103
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKL 178
N+++KNLD ID + L FS FG I S K+ +G G+SKGFGFV F + E A A+ ++
Sbjct: 12 NLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTEM 70
Query: 179 NGMLINDKQVFVGHFLRKQERE 200
NG ++ K ++V RK+ER+
Sbjct: 71 NGRIVATKPLYVALAQRKEERQ 92
Score = 42.7 bits (99), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
+LYV +LD + D +L FS G + S +V + RS G+G+V +++P +A +A+
Sbjct: 12 NLYVKNLDDGIDDERLRKEFSPFGTITSAKVM--MEGGRSKGFGFVCFSSPEEATKAVTE 69
Query: 91 LNFTPLNNKSIRIMYSHR 108
+N + K + + + R
Sbjct: 70 MNGRIVATKPLYVALAQR 87
>gi|432868074|ref|XP_004071398.1| PREDICTED: ELAV-like protein 3-like isoform 2 [Oryzias latipes]
Length = 359
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 96/327 (29%), Positives = 153/327 (46%), Gaps = 67/327 (20%)
Query: 15 PNGVAAGASGNQFLT-TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGY 73
PNG +G+ + T+L V L N+T + LF +G++ S ++ RD T +SLGY
Sbjct: 22 PNGPVISTNGSTDDSKTNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQSLGY 81
Query: 74 GYVNYANPADAARALDVLNFTPLNNKSIRIMYSH-RDPSIRKSGTGNIFIKNLDKSIDHK 132
G+VNY +P DA +A++ LN L K+I++ Y+ SIR + N+++ L K++ K
Sbjct: 82 GFVNYVDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDA---NLYVSGLPKTMSQK 138
Query: 133 ALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKLNGM---------- 181
+ FS +G I++ +I D +G S+G GF++F+ + A+ AI LNG
Sbjct: 139 DMEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRNEAEEAIKGLNGQKPLGAAEPIT 198
Query: 182 --LINDKQVFVGHFLRKQERETVA-------------------------IKTKFN----- 209
N+ G L Q +T A +K++F+
Sbjct: 199 VKFANNPSQKTGQALLTQLYQTAARRYTGPLHHQTQRFRLDNLLNASYGVKSRFSPITID 258
Query: 210 ------------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD-GDGKSKC 250
+FV NL + L ++FG +G +T+ V+RD K K
Sbjct: 259 SMTSLAGVNLTGPTGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKG 318
Query: 251 FGFVNFENADDAAKAVEALNGKKFDDR 277
FGFV N D+AA A+ +LNG + DR
Sbjct: 319 FGFVTMTNYDEAAMAIASLNGYRLGDR 345
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 153/326 (46%), Gaps = 57/326 (17%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDK 177
N+ + L +++ + F S G I SCK+ D +GQS G+GFV + + A AI+
Sbjct: 39 NLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPNDADKAINT 98
Query: 178 LNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYG-TIT 236
LNG+ + K + V + + +I+ N++V L ++ + +D++++F +YG IT
Sbjct: 99 LNGLKLQTKTIKVSY----ARPSSASIRDA--NLYVSGLPKTMSQKDMEQLFSQYGRIIT 152
Query: 237 SAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKK-----------FDDR-------- 277
S +++ G S+ GF+ F+ ++A +A++ LNG+K F +
Sbjct: 153 SRILVDQVTGISRGVGFIRFDKRNEAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQA 212
Query: 278 ----------EWYVGKAQKKSER---------EQELKGQFEQAMKETVDKFQGLNL---- 314
Y G +++R +K +F +++ G+NL
Sbjct: 213 LLTQLYQTAARRYTGPLHHQTQRFRLDNLLNASYGVKSRFSPITIDSMTSLAGVNLTGPT 272
Query: 315 ------YIKNLGDSIDDEKLKELFSEFGTITSCKVMRD-PSGISKGSGFVAFSTPEEASR 367
++ NL D+ L +LF FG +T+ KV+RD + KG GFV + +EA+
Sbjct: 273 GAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAM 332
Query: 368 ALAEMNGKMIVSKPLYVAVAQRKEER 393
A+A +NG + + L V+ K+ +
Sbjct: 333 AIASLNGYRLGDRVLQVSFKTSKQHK 358
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 103/203 (50%), Gaps = 24/203 (11%)
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENADDAAKAVEA 268
N+ V L ++ T E+ K +FG G I S ++RD G+S +GFVN+ + +DA KA+
Sbjct: 39 NLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPNDADKAINT 98
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
LNG K + V A+ S ++ NLY+ L ++ + +
Sbjct: 99 LNGLKLQTKTIKVSYARPSSASIRD------------------ANLYVSGLPKTMSQKDM 140
Query: 329 KELFSEFGTITSCKVMRDP-SGISKGSGFVAFSTPEEASRALAEMNGK--MIVSKPLYVA 385
++LFS++G I + +++ D +GIS+G GF+ F EA A+ +NG+ + ++P+ V
Sbjct: 141 EQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRNEAEEAIKGLNGQKPLGAAEPITVK 200
Query: 386 VAQRKEERRARLQAQFSQMRPVA 408
A ++ QA +Q+ A
Sbjct: 201 FANNPSQKTG--QALLTQLYQTA 221
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 10/94 (10%)
Query: 12 MSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSL 71
++GP G ++V +L +S L+ LF G V +V+V RD +T +
Sbjct: 268 LTGPTGAGW----------CIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCK 317
Query: 72 GYGYVNYANPADAARALDVLNFTPLNNKSIRIMY 105
G+G+V N +AA A+ LN L ++ +++ +
Sbjct: 318 GFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSF 351
>gi|183230986|ref|XP_655191.2| polyadenylate-binding protein [Entamoeba histolytica HM-1:IMSS]
gi|169802669|gb|EAL49805.2| polyadenylate-binding protein, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449705618|gb|EMD45631.1| polyadenylate-binding protein, putative [Entamoeba histolytica
KU27]
Length = 524
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 135/564 (23%), Positives = 248/564 (43%), Gaps = 85/564 (15%)
Query: 31 SLYVGDLDFNVTDSQLY-DLFSQV-GQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
+++V +L +VT++ L+ ++F QV +V + RD +R Y+N + A +A+
Sbjct: 20 TIFVNNLPTSVTETVLFAEVFKDFPNQVSNVHINRD--SRFDTTIAYINMNSHEAALQAI 77
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
LN T + K + + +S RD R N+++K + KS+ + L + F +G+ LS K
Sbjct: 78 KKLNGTLIEGKKVNMFWSLRDFKQRTQNETNLYVKYIKKSVTQQKLQEVFEKYGHTLSVK 137
Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGML--INDKQVFVGHFLRKQERETVAIKT 206
++++ +S GFG+V++ E Q A+D + + I D+ + F ++ + +KT
Sbjct: 138 LSSNEKNESNGFGYVKYCTVEECQAAVDARDEIAKEIGDEGFLIAKFCKQPKN----LKT 193
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGK-----------SKCFGFVN 255
N+++ N+D++ T+E K F +G I DGK K GFVN
Sbjct: 194 ---NLYIGNIDKTVTEEQFLKYFETFGPIKCG-----ADGKKFYRFLYDEKYEKNKGFVN 245
Query: 256 FENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLY 315
+EN +DA KAV A D + V + K ER+QE K + K++ N +
Sbjct: 246 YENTEDAQKAVTAPRHCVLGDSDILVTYYKTKKERKQEFKQHANEIKMNATGKYKEYNFH 305
Query: 316 IKNLGDSIDDEKLKELFSEFGTITSCK---VMRDPSGISKGSGFVAFSTPEEASRALAEM 372
+K I + ++++ + G I S K V +P+ + ++ F + A + + +
Sbjct: 306 VKTDKAGITEGEIRDALQDCGGIYSIKIKYVNSEPTDVV----YICFDNAQSAHQFIQKA 361
Query: 373 NGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFL 432
+ P + K+ER S G +P G FL
Sbjct: 362 QVLGWTANPF-----KTKQER--------SNANNYYNGTGIP-----------GFPVNFL 397
Query: 433 -YGQAPPAIIPPQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVG 491
Y Q P++ M R P N Q P ++ A + I ++ S+
Sbjct: 398 QYFQLFPSVFNTSMN------RQPKPGNKQ--PRNVSASQNAKKKSKVDNNIKKQPKSIE 449
Query: 492 QPMPITALSTALANASPEQQRTLLGESLYPLV---EQLERDAAAKVTGMLLE-MDQTEVL 547
+ +T E+ + LG+ LY + E + + ++TG+LLE ++ +E+
Sbjct: 450 KAPTVT-----------EEMKNNLGDQLYDFILGLEDYDEEITGRITGVLLESIEYSELN 498
Query: 548 HLLESP-EALKAKVAEAMEVLRSV 570
++L + E LK + E E L+ +
Sbjct: 499 NMLRNKIEELKNVIKEVYENLKKI 522
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 85/182 (46%), Gaps = 18/182 (9%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
T+LYV + +VT +L ++F + G LSV++ + S G+GYV Y + A+D
Sbjct: 107 TNLYVKYIKKSVTQQKLQEVFEKYGHTLSVKLSSN-EKNESNGFGYVKYCTVEECQAAVD 165
Query: 90 VLN--FTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSC 147
+ + ++ I + P K+ N++I N+DK++ + F +FG I
Sbjct: 166 ARDEIAKEIGDEGFLIAKFCKQPKNLKT---NLYIGNIDKTVTEEQFLKYFETFGPI--- 219
Query: 148 KIATDG---------SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQE 198
K DG K GFV +EN E AQ A+ ++ D + V ++ K+E
Sbjct: 220 KCGADGKKFYRFLYDEKYEKNKGFVNYENTEDAQKAVTAPRHCVLGDSDILVTYYKTKKE 279
Query: 199 RE 200
R+
Sbjct: 280 RK 281
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 65/173 (37%), Gaps = 26/173 (15%)
Query: 28 LTTSLYVGDLDFNVTDSQLYDLFSQVGQVLS-------VRVCRDLSTRRSLGYGYVNYAN 80
L T+LY+G++D VT+ Q F G + R D ++ G+VNY N
Sbjct: 191 LKTNLYIGNIDKTVTEEQFLKYFETFGPIKCGADGKKFYRFLYDEKYEKNK--GFVNYEN 248
Query: 81 PADAARALDVLNFTPLNNKSIRIMY-----------SHRDPSIRKSGTG-----NIFIKN 124
DA +A+ L + I + Y I+ + TG N +K
Sbjct: 249 TEDAQKAVTAPRHCVLGDSDILVTYYKTKKERKQEFKQHANEIKMNATGKYKEYNFHVKT 308
Query: 125 LDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDK 177
I + D G I S KI S + ++ F+N +SA I K
Sbjct: 309 DKAGITEGEIRDALQDCGGIYSIKIKYVNS-EPTDVVYICFDNAQSAHQFIQK 360
>gi|117557982|gb|AAI27339.1| ELAV (embryonic lethal, abnormal vision)-like 2 (Hu antigen B)
[Xenopus (Silurana) tropicalis]
Length = 346
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 93/310 (30%), Positives = 145/310 (46%), Gaps = 51/310 (16%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
T+L V L N+T +L LF +G++ S ++ RD T +SLGYG+VNY +P DA +A++
Sbjct: 38 TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAIN 97
Query: 90 VLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKI 149
LN L K+I++ Y+ PS N+++ L K++ K L FS +G I++ +I
Sbjct: 98 TLNGLRLQTKTIKVSYAR--PSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRI 155
Query: 150 ATDG-SGQSKGFGFVQFENKESAQNAIDKLNGM------------LINDKQVFVGHFLRK 196
D +G S+G GF++F+ + A+ AI LNG N+ V H +
Sbjct: 156 LVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKVNHTILS 215
Query: 197 QERE-----------------------TVAIKTKFNNV------------FVKNLDESTT 221
Q + T+ T + FV NL
Sbjct: 216 QLYQSPNRRYPGPLAQQAQRFSRFSPMTIDGMTSLAGINFPGHAGTGWCIFVYNLAPDAD 275
Query: 222 DEDLKKIFGEYGTITSAVVMRD-GDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWY 280
+ L ++FG +G +T+ V+RD K K FGFV N D+AA A+ +LNG + DR
Sbjct: 276 ESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQ 335
Query: 281 VGKAQKKSER 290
V K+ +
Sbjct: 336 VSFKTSKTHK 345
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 152/317 (47%), Gaps = 52/317 (16%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDK 177
N+ + L +++ + L F S G I SCK+ D +GQS G+GFV + + + A+ AI+
Sbjct: 39 NLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINT 98
Query: 178 LNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYG-TIT 236
LNG+ + K + V + + +I+ N++V L ++ T ++L+++F +YG IT
Sbjct: 99 LNGLRLQTKTIKVSY----ARPSSASIRDA--NLYVSGLPKTMTQKELEQLFSQYGRIIT 152
Query: 237 SAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKK-----------FDDR-------- 277
S +++ G S+ GF+ F+ +A +A++ LNG+K F +
Sbjct: 153 SRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKVNHT 212
Query: 278 ----------EWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLN----------LYIK 317
Y G ++++R +F + + G+N +++
Sbjct: 213 ILSQLYQSPNRRYPGPLAQQAQRFS----RFSPMTIDGMTSLAGINFPGHAGTGWCIFVY 268
Query: 318 NLGDSIDDEKLKELFSEFGTITSCKVMRD-PSGISKGSGFVAFSTPEEASRALAEMNGKM 376
NL D+ L ++F FG +T+ KV+RD + KG GFV + +EA+ A+A +NG
Sbjct: 269 NLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYR 328
Query: 377 IVSKPLYVAVAQRKEER 393
+ + L V+ K +
Sbjct: 329 LGDRVLQVSFKTSKTHK 345
>gi|400260942|pdb|4F25|A Chain A, Crystal Structure Of The Second Rrm Domain Of Human Pabpc1
At Ph 6.0
gi|400260943|pdb|4F26|A Chain A, Crystal Structure Of The Second Rrm Domain Of Human Pabpc1
A Ph 9.0
Length = 115
Score = 132 bits (332), Expect = 5e-28, Method: Composition-based stats.
Identities = 65/108 (60%), Positives = 86/108 (79%), Gaps = 3/108 (2%)
Query: 116 GTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAI 175
G+GNIFIKNLDKSID+KAL+DTFS+FGNILSCK+ D +G SKG+GFV FE +E+A+ AI
Sbjct: 4 GSGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAI 62
Query: 176 DKLNGMLINDKQVFVGHFLRKQERETV--AIKTKFNNVFVKNLDESTT 221
+K+NGML+ND++VFVG F ++ERE A +F NV++KN +T
Sbjct: 63 EKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGPGST 110
Score = 78.2 bits (191), Expect = 1e-11, Method: Composition-based stats.
Identities = 44/102 (43%), Positives = 64/102 (62%), Gaps = 4/102 (3%)
Query: 313 NLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEM 372
N++IKNL SID++ L + FS FG I SCKV+ D +G SKG GFV F T E A RA+ +M
Sbjct: 7 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKM 65
Query: 373 NGKMIVSKPLYVAVAQRKEERRARLQA---QFSQMRPVAMGP 411
NG ++ + ++V + ++ER A L A +F+ + GP
Sbjct: 66 NGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGP 107
Score = 75.9 bits (185), Expect = 5e-11, Method: Composition-based stats.
Identities = 42/111 (37%), Positives = 66/111 (59%), Gaps = 11/111 (9%)
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEAL 269
N+F+KNLD+S ++ L F +G I S V+ D +G SK +GFV+FE + A +A+E +
Sbjct: 7 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKM 65
Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
NG +DR+ +VG+ + + ERE EL + ++ N+YIKN G
Sbjct: 66 NGMLLNDRKVFVGRFKSRKEREAELGARAKEFT----------NVYIKNFG 106
Score = 45.4 bits (106), Expect = 0.081, Method: Composition-based stats.
Identities = 29/101 (28%), Positives = 53/101 (52%), Gaps = 8/101 (7%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++++ +LD ++ + LYD FS G +LS +V D S GYG+V++ A RA++
Sbjct: 7 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD--ENGSKGYGFVHFETQEAAERAIEK 64
Query: 91 LNFTPLNNKSIRI----MYSHRDPSI--RKSGTGNIFIKNL 125
+N LN++ + + R+ + R N++IKN
Sbjct: 65 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNF 105
>gi|115461392|ref|NP_001054296.1| Os04g0682400 [Oryza sativa Japonica Group]
gi|113565867|dbj|BAF16210.1| Os04g0682400 [Oryza sativa Japonica Group]
Length = 1008
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 107/389 (27%), Positives = 182/389 (46%), Gaps = 53/389 (13%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
T+LYVG+L +V +L +LF GQ++ RV D T S GYG+V Y++P A+ A+
Sbjct: 293 TNLYVGNLPASVGSHKLIELFLPFGQIVRSRVVDDCFTGLSQGYGFVKYSDPRCASEAIK 352
Query: 90 VLNFTPLNNKSIRIMYS--------HRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
+N + ++++ + + PS +++ +++ NL S++ L F F
Sbjct: 353 RMNGRLVEGTALKVRVTGFPSSEDNSQQPS-KETDMAKLYVCNLSLSMNTDRLIHLFLPF 411
Query: 142 GNILSCKIATD-GSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFV---------- 190
G + + K+A D +G SKG+GFVQ+ + A A+ LNG L++ +++ V
Sbjct: 412 GEVTNAKVAKDHTTGLSKGYGFVQYSSPHHAAEAVIHLNGRLVDGRKIEVRVSGIPSTLP 471
Query: 191 -----------GHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAV 239
+ + +N++V N+ S + L ++F +G IT A
Sbjct: 472 NSAVESPSTTRNSAVESPSTTRTVKEIDMSNLYVCNMPSSIDTKKLVELFLPFGKITHAR 531
Query: 240 VMRDGDGKS-KCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQF 298
V+ D D S K +GF+ F +++ A KA+ A+NG V + G
Sbjct: 532 VVADPDTFSAKGYGFIKFTDSESATKAIAAMNGALVGGEMIIV-----------RVAGLS 580
Query: 299 EQAMKETVDKFQGLN---LYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSG 355
A V Q +N LYI NL S+ +K+ LF+ FG IT KV+ ++
Sbjct: 581 PSASISAVQTTQDINKSRLYITNLPRSMTADKMVNLFAPFGQIT--KVL-----MNLEYS 633
Query: 356 FVAFSTPEEASRALAEMNGKMIVSKPLYV 384
V ++ A++A+ M+G M+ K L V
Sbjct: 634 LVWYADAPSATKAVQHMDGYMVEGKRLVV 662
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 97/312 (31%), Positives = 152/312 (48%), Gaps = 22/312 (7%)
Query: 98 NKSIRIMYSHRDPSIRKSG-------TGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+K + H PS + G N+++ NL S+ L + F FG I+ ++
Sbjct: 266 DKHLHKKQEHTPPSFPQDGGKLKEVDNTNLYVGNLPASVGSHKLIELFLPFGQIVRSRVV 325
Query: 151 TDG-SGQSKGFGFVQFENKESAQNAIDKLNGMLINDK--QVFVGHFLRKQERETVAIK-T 206
D +G S+G+GFV++ + A AI ++NG L+ +V V F ++ K T
Sbjct: 326 DDCFTGLSQGYGFVKYSDPRCASEAIKRMNGRLVEGTALKVRVTGFPSSEDNSQQPSKET 385
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD-GDGKSKCFGFVNFENADDAAKA 265
++V NL S + L +F +G +T+A V +D G SK +GFV + + AA+A
Sbjct: 386 DMAKLYVCNLSLSMNTDRLIHLFLPFGEVTNAKVAKDHTTGLSKGYGFVQYSSPHHAAEA 445
Query: 266 VEALNGKKFDDREWYVG---------KAQKKSEREQELKGQFEQAMKETVDKFQGLNLYI 316
V LNG+ D R+ V + +S + TV + NLY+
Sbjct: 446 VIHLNGRLVDGRKIEVRVSGIPSTLPNSAVESPSTTRNSAVESPSTTRTVKEIDMSNLYV 505
Query: 317 KNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGIS-KGSGFVAFSTPEEASRALAEMNGK 375
N+ SID +KL ELF FG IT +V+ DP S KG GF+ F+ E A++A+A MNG
Sbjct: 506 CNMPSSIDTKKLVELFLPFGKITHARVVADPDTFSAKGYGFIKFTDSESATKAIAAMNGA 565
Query: 376 MIVSKPLYVAVA 387
++ + + V VA
Sbjct: 566 LVGGEMIIVRVA 577
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 170/390 (43%), Gaps = 34/390 (8%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
++LYV ++ ++ +L +LF G++ RV D T + GYG++ + + A +A+
Sbjct: 501 SNLYVCNMPSSIDTKKLVELFLPFGKITHARVVADPDTFSAKGYGFIKFTDSESATKAIA 560
Query: 90 VLNFTPLNNKSIRIMYSHRDPSIRKSGT--------GNIFIKNLDKSIDHKALHDTFSSF 141
+N + + I + + PS S ++I NL +S+ + + F+ F
Sbjct: 561 AMNGALVGGEMIIVRVAGLSPSASISAVQTTQDINKSRLYITNLPRSMTADKMVNLFAPF 620
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
G I + + + V + + SA A+ ++G ++ K++ V ++ E T
Sbjct: 621 GQITKVLMNLE-------YSLVWYADAPSATKAVQHMDGYMVEGKRLVV----KRSELCT 669
Query: 202 VAI---------KTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFG 252
+ N++V + S T++ +F +G + A + R + +G
Sbjct: 670 TNASQAGGKPIKEIDMANLYVGRVPSSLTEDQFIDLFRPFGRVVQARMFR-----FQRYG 724
Query: 253 FVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGL 312
V F+N AA A++ L+G + V A +E Q +
Sbjct: 725 MVRFDNPSCAAAAIDHLDGYQIGGSILAVRVAGLPAESNAAKGALTSQMSSNEQGQIDMT 784
Query: 313 NLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP-SGISKGSGFVAFSTPEEASRALAE 371
NLY+ +L +++E+L +LF G IT KV+ + +G+SKG GFV F+ A+ AL
Sbjct: 785 NLYVSHLPSYVNNERLIDLFLPCGQITQAKVVVERYTGVSKGFGFVKFADAYSAAVALTH 844
Query: 372 MNGKMIVSKPLYVAVAQRKEERRARLQAQF 401
MNG + L V +A + + A F
Sbjct: 845 MNGYPLDGHVLEVRIAGVHPDAMSSYMAHF 874
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 108/247 (43%), Gaps = 48/247 (19%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
+LYVG + ++T+ Q DLF G+V+ R+ R +R YG V + NP+ AA A+D
Sbjct: 687 NLYVGRVPSSLTEDQFIDLFRPFGRVVQARMFR---FQR---YGMVRFDNPSCAAAAIDH 740
Query: 91 LNFTPLNNK--SIRI-----------------MYSHRDPSIRKSGTGNIFIKNLDKSIDH 131
L+ + ++R+ M S+ I + N+++ +L +++
Sbjct: 741 LDGYQIGGSILAVRVAGLPAESNAAKGALTSQMSSNEQGQIDMT---NLYVSHLPSYVNN 797
Query: 132 KALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQV-- 188
+ L D F G I K+ + +G SKGFGFV+F + SA A+ +NG ++ +
Sbjct: 798 ERLIDLFLPCGQITQAKVVVERYTGVSKGFGFVKFADAYSAAVALTHMNGYPLDGHVLEV 857
Query: 189 ----------------FVGHF-LRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGE 231
F HF + + V I T + + +TT E+L ++
Sbjct: 858 RIAGVHPDAMSSYMAHFYSHFTMHDPAKAAVGIPTSYWPHYYDESAYNTTAENLGQVTTT 917
Query: 232 YGTITSA 238
T SA
Sbjct: 918 SATDASA 924
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 50/111 (45%), Gaps = 8/111 (7%)
Query: 26 QFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAA 85
Q T+LYV L V + +L DLF GQ+ +V + T S G+G+V +A+ AA
Sbjct: 780 QIDMTNLYVSHLPSYVNNERLIDLFLPCGQITQAKVVVERYTGVSKGFGFVKFADAYSAA 839
Query: 86 RALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHD 136
AL +N PL+ + + + P S + + H +HD
Sbjct: 840 VALTHMNGYPLDGHVLEVRIAGVHPDAMSSYMAHFY--------SHFTMHD 882
>gi|18858615|ref|NP_571524.1| ELAV-like protein 3 [Danio rerio]
gi|1683635|gb|AAB36515.1| zHuC [Danio rerio]
Length = 345
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 144/297 (48%), Gaps = 52/297 (17%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
T+L V L N+T + LF +G++ S ++ RD T +SLGYG+VNY +P DA +A++
Sbjct: 38 TNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPNDADKAIN 97
Query: 90 VLNFTPLNNKSIRIMYSH-RDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
LN L K+I++ Y+ SIR + N+++ L K++ K + FS +G I++ +
Sbjct: 98 TLNGLKLQTKTIKVSYARPSSASIRDA---NLYVSGLPKTMSQKDMEQLFSQYGRIITSR 154
Query: 149 IATDG-SGQSKGFGFVQFENKESAQNAIDKLNGM------------LINDKQVFVGHFLR 195
I + +G S+G GF++F+ + A+ AI LNG N+ G L
Sbjct: 155 ILVNQVTGISRGVGFIRFDKRNEAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALL 214
Query: 196 KQERETVAIKT-----------KFN-----------------------NVFVKNLDESTT 221
Q +T A + +F+ +FV NL
Sbjct: 215 TQLYQTAARRYTGPLHHQTQRFRFSPITIDSMTSLAGVNLTGPTGAGWCIFVYNLSPEAD 274
Query: 222 DEDLKKIFGEYGTITSAVVMRD-GDGKSKCFGFVNFENADDAAKAVEALNGKKFDDR 277
+ L ++FG +G +T+ V+RD K K FGFV N D+AA A+ +LNG + DR
Sbjct: 275 ESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDR 331
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 153/312 (49%), Gaps = 43/312 (13%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDK 177
N+ + L +++ + F S G I SCK+ D +GQS G+GFV + + A AI+
Sbjct: 39 NLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPNDADKAINT 98
Query: 178 LNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYG-TIT 236
LNG+ + K + V + + +I+ N++V L ++ + +D++++F +YG IT
Sbjct: 99 LNGLKLQTKTIKVSY----ARPSSASIRDA--NLYVSGLPKTMSQKDMEQLFSQYGRIIT 152
Query: 237 SAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKK------------FDDREWYVGKA 284
S +++ G S+ GF+ F+ ++A +A++ LNG+K ++ G+A
Sbjct: 153 SRILVNQVTGISRGVGFIRFDKRNEAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQA 212
Query: 285 ------QKKSER------EQELKGQFEQAMKETVDKFQGLNL----------YIKNLGDS 322
Q + R Q + +F +++ G+NL ++ NL
Sbjct: 213 LLTQLYQTAARRYTGPLHHQTQRFRFSPITIDSMTSLAGVNLTGPTGAGWCIFVYNLSPE 272
Query: 323 IDDEKLKELFSEFGTITSCKVMRD-PSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKP 381
D+ L +LF FG +T+ KV+RD + KG GFV + +EA+ A+A +NG + +
Sbjct: 273 ADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRV 332
Query: 382 LYVAVAQRKEER 393
L V+ K+ +
Sbjct: 333 LQVSFKTSKQHK 344
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 103/203 (50%), Gaps = 24/203 (11%)
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENADDAAKAVEA 268
N+ V L ++ T E+ K +FG G I S ++RD G+S +GFVN+ + +DA KA+
Sbjct: 39 NLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPNDADKAINT 98
Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
LNG K + V A+ S ++ NLY+ L ++ + +
Sbjct: 99 LNGLKLQTKTIKVSYARPSSASIRD------------------ANLYVSGLPKTMSQKDM 140
Query: 329 KELFSEFGTITSCKVMRDP-SGISKGSGFVAFSTPEEASRALAEMNGK--MIVSKPLYVA 385
++LFS++G I + +++ + +GIS+G GF+ F EA A+ +NG+ + ++P+ V
Sbjct: 141 EQLFSQYGRIITSRILVNQVTGISRGVGFIRFDKRNEAEEAIKGLNGQKPLGAAEPITVK 200
Query: 386 VAQRKEERRARLQAQFSQMRPVA 408
A ++ QA +Q+ A
Sbjct: 201 FANNPSQKTG--QALLTQLYQTA 221
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 10/94 (10%)
Query: 12 MSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSL 71
++GP G ++V +L +S L+ LF G V +V+V RD +T +
Sbjct: 254 LTGPTGAGW----------CIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCK 303
Query: 72 GYGYVNYANPADAARALDVLNFTPLNNKSIRIMY 105
G+G+V N +AA A+ LN L ++ +++ +
Sbjct: 304 GFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSF 337
>gi|407408437|gb|EKF31876.1| poly(A)-binding protein, putative,polyadenylate-binding protein,
putative [Trypanosoma cruzi marinkellei]
Length = 569
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 156/302 (51%), Gaps = 24/302 (7%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
+++V +L V +L +F + G +LS +V D +S GYG+V++ N A A++
Sbjct: 111 NVFVKNLKNEVDSRELGAIFKKFGDILSCKVMED-EEGKSRGYGFVHFKNDNAAKEAIEN 169
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGT--------GNIFIKNLDKSIDHKALHDTFSSFG 142
+N + + M + IR++ N++IK + ++D + + FS FG
Sbjct: 170 MNGDKDHADEEKKMGLYVANFIRRNARLATLVANFTNVYIKQVLPTVDKEVIEKFFSRFG 229
Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDK-----LNGMLINDKQVFVGHFLRKQ 197
I S D +G+ F F FE E A AI+ ++G++ ++++V +
Sbjct: 230 GITSSATCKDKNGRV--FAFCNFEKHEDAVKAIEASHEQFVDGVVPPGEKLYVQRAQPRS 287
Query: 198 ERETVAIKTKF-------NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKC 250
ER +A++ K+ NN++V+N D T+E+L ++F EYG I S VM D +G S+
Sbjct: 288 ER-LIALRQKYMQCQTLGNNLYVRNFDPEFTEENLHELFKEYGVIRSCRVMTDANGNSRG 346
Query: 251 FGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQ 310
FGFV+F NAD A A+ +NG+ + + V AQ++ +R L+ QF+Q ++ + +
Sbjct: 347 FGFVSFGNADQANAALREMNGRMLNGKPLIVNIAQRRDQRFMMLRLQFQQRLQAMMRRMH 406
Query: 311 GL 312
+
Sbjct: 407 SM 408
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 88/185 (47%), Gaps = 18/185 (9%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
T++Y+ + V + FS+ G + S C+D + R + + N+ DA +A++
Sbjct: 205 TNVYIKQVLPTVDKEVIEKFFSRFGGITSSATCKDKNGR---VFAFCNFEKHEDAVKAIE 261
Query: 90 V---------------LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKAL 134
L +S R++ + ++ N++++N D + L
Sbjct: 262 ASHEQFVDGVVPPGEKLYVQRAQPRSERLIALRQKYMQCQTLGNNLYVRNFDPEFTEENL 321
Query: 135 HDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFL 194
H+ F +G I SC++ TD +G S+GFGFV F N + A A+ ++NG ++N K + V
Sbjct: 322 HELFKEYGVIRSCRVMTDANGNSRGFGFVSFGNADQANAALREMNGRMLNGKPLIVNIAQ 381
Query: 195 RKQER 199
R+ +R
Sbjct: 382 RRDQR 386
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
PITA L S ++QR LG+ LY V ++ D A K+TGM LEMD E LL +
Sbjct: 492 PITA--EDLRTMSVDEQRAALGDRLYIKVFEIAPDHAPKITGMFLEMDLKEAFTLLNNQR 549
Query: 555 ALKAKVAEAMEVLRS 569
L+ KV EA+ VL++
Sbjct: 550 LLQEKVIEALCVLKA 564
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 305 TVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRD-PSGISKGSGFVAFSTPE 363
T Q +LY+ +L + + L ELF FGTI + +V RD + S G G++ F+ +
Sbjct: 15 TTKALQVASLYVGDLDPIVTEPHLVELFKPFGTILNVRVCRDIITQRSLGYGYINFNNHD 74
Query: 364 EASRALAEMNGKMIVSKPLYVAVAQR 389
A++A+ +N K + K + + QR
Sbjct: 75 SAAKAMEALNFKRVGDKCMRIMWQQR 100
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 26 QFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAA 85
Q L +LYV + D T+ L++LF + G + S RV D + S G+G+V++ N A
Sbjct: 301 QTLGNNLYVRNFDPEFTEENLHELFKEYGVIRSCRVMTD-ANGNSRGFGFVSFGNADQAN 359
Query: 86 RALDVLNFTPLNNKSIRIMYSHR 108
AL +N LN K + + + R
Sbjct: 360 AALREMNGRMLNGKPLIVNIAQR 382
>gi|366988141|ref|XP_003673837.1| hypothetical protein NCAS_0A08980 [Naumovozyma castellii CBS 4309]
gi|342299700|emb|CCC67456.1| hypothetical protein NCAS_0A08980 [Naumovozyma castellii CBS 4309]
Length = 605
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 105/402 (26%), Positives = 183/402 (45%), Gaps = 64/402 (15%)
Query: 28 LTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARA 87
+ TSL++ L +VT++ LYD+FS+ ++S+++C D +++SL YGY+N+++ +A +A
Sbjct: 90 IVTSLFINGLADDVTENMLYDVFSKYQSLVSLKICCDSDSKKSLNYGYLNFSDELEAKKA 149
Query: 88 LDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNL---DKSIDHKALHDTFSSFGNI 144
+D N+T L I++M S R+ RK+ N+F NL +K + +A +DTF +G I
Sbjct: 150 VDDFNYTILFGNEIKMMPSLRNTIYRKNIGTNVFFANLPLENKHLTTRAFYDTFKGYGEI 209
Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVG-HFLRK------- 196
LSCK+ + K GFV F+N + AQ I+ N + ++ G HF ++
Sbjct: 210 LSCKL-----DKRKNIGFVYFDNDKPAQMVINDFNNKIYFGNKIICGLHFDKEIRNFPNF 264
Query: 197 --------------QERETVAIKTKF-----------NNVFVKNLDESTTDEDLKKIFGE 231
E E I +F N +FVKNL DE++ F +
Sbjct: 265 DKRKANIDNKIIIDDELEAANIGVQFKKNSELILPHPNAIFVKNLPFDVPDEEILDHFSK 324
Query: 232 YGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSERE 291
G + S KS + F+ ++ D +A N KF + V +A+ K+
Sbjct: 325 LGPVKSVFSSNVTKYKSS-WAFITYKKQTDTIRATNHFNNTKFQGKTITVSRAKLKNTEG 383
Query: 292 QELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGIS 351
+Y+ N+ + E L+ L + G I + K+ P
Sbjct: 384 NR-------------------TVYLNNVSVVCNQEFLRRLCLQEG-IKAQKIYLKPDDHD 423
Query: 352 --KGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKE 391
SG++ ++ + A R +NGK I ++V+ + K+
Sbjct: 424 SYSCSGYIKCNSKDNAKRVFEILNGKFIGGCYIHVSWDKIKD 465
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 122/309 (39%), Gaps = 37/309 (11%)
Query: 108 RDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFE 166
R+ RK ++FI L + L+D FS + +++S KI D S +S +G++ F
Sbjct: 82 RNYRSRKRIVTSLFINGLADDVTENMLYDVFSKYQSLVSLKICCDSDSKKSLNYGYLNFS 141
Query: 167 NKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNL---DESTTDE 223
++ A+ A+D N ++ ++ + L R T+ K NVF NL ++ T
Sbjct: 142 DELEAKKAVDDFNYTILFGNEIKMMPSL----RNTIYRKNIGTNVFFANLPLENKHLTTR 197
Query: 224 DLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGK 283
F YG I S + K K GFV F+N A + N K + + G
Sbjct: 198 AFYDTFKGYGEILSCKL-----DKRKNIGFVYFDNDKPAQMVINDFNNKIYFGNKIICGL 252
Query: 284 AQKKSERE----QELKGQFEQAMKETVDKFQGLN------------------LYIKNLGD 321
K R + K + + D+ + N +++KNL
Sbjct: 253 HFDKEIRNFPNFDKRKANIDNKII-IDDELEAANIGVQFKKNSELILPHPNAIFVKNLPF 311
Query: 322 SIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKP 381
+ DE++ + FS+ G + S + + F+ + + RA N K
Sbjct: 312 DVPDEEILDHFSKLGPVKSV-FSSNVTKYKSSWAFITYKKQTDTIRATNHFNNTKFQGKT 370
Query: 382 LYVAVAQRK 390
+ V+ A+ K
Sbjct: 371 ITVSRAKLK 379
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 75/187 (40%), Gaps = 25/187 (13%)
Query: 211 VFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGK-SKCFGFVNFENADDAAKAVEAL 269
+F+ L + T+ L +F +Y ++ S + D D K S +G++NF + +A KAV+
Sbjct: 94 LFINGLADDVTENMLYDVFSKYQSLVSLKICCDSDSKKSLNYGYLNFSDELEAKKAVDDF 153
Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL---GDSIDDE 326
N E + + + + + + G N++ NL +
Sbjct: 154 NYTILFGNEIKMMPSLRNTIYRKNI----------------GTNVFFANLPLENKHLTTR 197
Query: 327 KLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 386
+ F +G I SCK+ + K GFV F + A + + N K+ + +
Sbjct: 198 AFYDTFKGYGEILSCKLDK-----RKNIGFVYFDNDKPAQMVINDFNNKIYFGNKIICGL 252
Query: 387 AQRKEER 393
KE R
Sbjct: 253 HFDKEIR 259
>gi|401409932|ref|XP_003884414.1| putative splicing factor [Neospora caninum Liverpool]
gi|325118832|emb|CBZ54384.1| putative splicing factor [Neospora caninum Liverpool]
Length = 550
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 71/170 (41%), Positives = 102/170 (60%), Gaps = 2/170 (1%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
+LY+G+LD V D L++LF Q G V +V V RD T GYG+V + N DA AL +
Sbjct: 30 TLYIGNLDSQVDDDLLWELFVQCGPVRTVSVPRDKLTGNHQGYGFVEFTNEVDADYALKL 89
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+N L KS+R+ S +D G NIF+ NLD +D K ++DTFS+FGNIL+ KI
Sbjct: 90 MNMVKLYGKSLRLNKSAQDRRNFDVGA-NIFLGNLDPDVDEKTIYDTFSTFGNILTAKIM 148
Query: 151 TDG-SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER 199
D +G S+GFGFV F+ E++ A+ +NG I ++ + V + +K R
Sbjct: 149 RDPETGISRGFGFVSFDTFEASDAALAAMNGQFICNRPIHVSYAYKKDTR 198
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 118/218 (54%), Gaps = 23/218 (10%)
Query: 211 VFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENADDAAKAVEAL 269
+++ NLD D+ L ++F + G + + V RD G + +GFV F N DA A++ +
Sbjct: 31 LYIGNLDSQVDDDLLWELFVQCGPVRTVSVPRDKLTGNHQGYGFVEFTNEVDADYALKLM 90
Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLK 329
N K GK+ + ++ Q+ + F+ G N+++ NL +D++ +
Sbjct: 91 NMVKL------YGKSLRLNKSAQDRR-NFDV----------GANIFLGNLDPDVDEKTIY 133
Query: 330 ELFSEFGTITSCKVMRDP-SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
+ FS FG I + K+MRDP +GIS+G GFV+F T E + ALA MNG+ I ++P++V+ A
Sbjct: 134 DTFSTFGNILTAKIMRDPETGISRGFGFVSFDTFEASDAALAAMNGQFICNRPIHVSYAY 193
Query: 389 RKEERRARLQAQFSQM----RPVAMGPSVPPRMPMYPP 422
+K+ R R + ++ RP + P+ P + PP
Sbjct: 194 KKDTRGERHGSAAERLLAANRPQIINPNAPATGGVKPP 231
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 91/176 (51%), Gaps = 7/176 (3%)
Query: 120 IFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKL 178
++I NLD +D L + F G + + + D +G +G+GFV+F N+ A A+ +
Sbjct: 31 LYIGNLDSQVDDDLLWELFVQCGPVRTVSVPRDKLTGNHQGYGFVEFTNEVDADYALKLM 90
Query: 179 NGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSA 238
N + + K + + Q+R + N+F+ NLD ++ + F +G I +A
Sbjct: 91 NMVKLYGKSLRLNK--SAQDRRNFDVGA---NIFLGNLDPDVDEKTIYDTFSTFGNILTA 145
Query: 239 VVMRDGD-GKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQE 293
+MRD + G S+ FGFV+F+ + + A+ A+NG+ +R +V A KK R +
Sbjct: 146 KIMRDPETGISRGFGFVSFDTFEASDAALAAMNGQFICNRPIHVSYAYKKDTRGER 201
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 302 MKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP-SGISKGSGFVAFS 360
+ + ++ Q LYI NL +DD+ L ELF + G + + V RD +G +G GFV F+
Sbjct: 19 ITQVYERNQDATLYIGNLDSQVDDDLLWELFVQCGPVRTVSVPRDKLTGNHQGYGFVEFT 78
Query: 361 TPEEASRALAEMNGKMIVSKPL 382
+A AL MN + K L
Sbjct: 79 NEVDADYALKLMNMVKLYGKSL 100
>gi|254584953|ref|XP_002498044.1| ZYRO0G00814p [Zygosaccharomyces rouxii]
gi|238940938|emb|CAR29111.1| ZYRO0G00814p [Zygosaccharomyces rouxii]
Length = 654
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 104/393 (26%), Positives = 174/393 (44%), Gaps = 63/393 (16%)
Query: 29 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
T +L++GDLD + + L +F + + SV+VC D T +SLGYGY+N++ D A
Sbjct: 102 TIALFIGDLDEQIDEEILIQIFKKFKSLTSVKVCTDAETGKSLGYGYLNFSRRQDTLAAT 161
Query: 89 DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNL---DKSIDHKALHDTFSSFGNIL 145
+ N+ P+ K +RIM S R+ RK+ NIF NL + ++ + +DTF +GNIL
Sbjct: 162 EEFNYRPIFGKEVRIMPSLRNTFYRKNIGTNIFFSNLPLENSNLTTRVFYDTFKVYGNIL 221
Query: 146 SCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVG-HF---LRK----- 196
SCK+ + K GF+ F+N +A+ I + NG ++ G HF LRK
Sbjct: 222 SCKL-----DKRKNIGFIYFDNDHAARVVIKEFNGSEFFGNKILCGIHFDKELRKFPEFE 276
Query: 197 -------------------------QERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGE 231
E ++ N +FVKNL S D+++ F
Sbjct: 277 KRKSSLNDITIPKEQLTLGPTDAKTVEHDSTQHLPHPNAIFVKNLPPSCPDDEILDYFSN 336
Query: 232 YGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSERE 291
G + S V + FV ++ D KAV+ +G +F R+ V KA+
Sbjct: 337 LGPVKS-VFSSTSHKYESSWAFVTYKKGSDTNKAVKIYHGAQFKGRKLSVIKAESARNGH 395
Query: 292 QELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGIS 351
Q + + LY++NL +++ L ++ E ++ + GI+
Sbjct: 396 GSYNKQSSKISYRPI-------LYLQNLSSVCNEQFLLQMCME------ERIKIENLGIT 442
Query: 352 -------KGSGFVAFSTPEEASRALAEMNGKMI 377
SG+V + ++A + L +N ++I
Sbjct: 443 DFFHDSFTYSGYVKCKSKKDADKILKLLNNRLI 475
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 129/318 (40%), Gaps = 42/318 (13%)
Query: 120 IFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKL 178
+FI +LD+ ID + L F F ++ S K+ TD +G+S G+G++ F ++ A ++
Sbjct: 105 LFIGDLDEQIDEEILIQIFKKFKSLTSVKVCTDAETGKSLGYGYLNFSRRQDTLAATEEF 164
Query: 179 NGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNL---DESTTDEDLKKIFGEYGTI 235
N I K+V + L R T K N+F NL + + T F YG I
Sbjct: 165 NYRPIFGKEVRIMPSL----RNTFYRKNIGTNIFFSNLPLENSNLTTRVFYDTFKVYGNI 220
Query: 236 TSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSER----- 290
S + K K GF+ F+N A ++ NG +F + G K R
Sbjct: 221 LSCKL-----DKRKNIGFIYFDNDHAARVVIKEFNGSEFFGNKILCGIHFDKELRKFPEF 275
Query: 291 --------------EQELKGQFEQAMKETVDKFQGL----NLYIKNLGDSIDDEKLKELF 332
EQ G + E D Q L +++KNL S D+++ + F
Sbjct: 276 EKRKSSLNDITIPKEQLTLGPTDAKTVEH-DSTQHLPHPNAIFVKNLPPSCPDDEILDYF 334
Query: 333 SEFGTITSCKVMRDPSGISKGS-GFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKE 391
S G + S V S + S FV + + ++A+ +G + L V A+
Sbjct: 335 SNLGPVKS--VFSSTSHKYESSWAFVTYKKGSDTNKAVKIYHGAQFKGRKLSVIKAESAR 392
Query: 392 ERRARLQAQFSQM--RPV 407
Q S++ RP+
Sbjct: 393 NGHGSYNKQSSKISYRPI 410
>gi|432936678|ref|XP_004082225.1| PREDICTED: ELAV-like protein 1-like [Oryzias latipes]
Length = 342
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 142/296 (47%), Gaps = 50/296 (16%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
T+L V L +++ +L LFS +G+V S ++ RD SLGYG+VNY NP+DA RA+
Sbjct: 36 TNLIVNYLPQSMSQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYLNPSDAERAIS 95
Query: 90 VLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKI 149
LN L +K+I++ Y+ PS N++I L K++ K + D FS +G I++ ++
Sbjct: 96 TLNGLRLQSKTIKVSYAR--PSSDTIKDANLYISGLPKNMTQKDVEDMFSCYGRIINSRV 153
Query: 150 ATDGS-GQSKGFGFVQFENKESAQNAIDKLNG-------------MLINDKQV----FVG 191
D S G S+G F++F+ + A+ A+ LNG N QV +
Sbjct: 154 LVDQSTGMSRGVAFIRFDKRSEAEEAVKSLNGQKPPGVTEPITVKFAANPNQVKNTQIIS 213
Query: 192 HFLRKQERE--------------------------TVAI---KTKFNNVFVKNLDESTTD 222
Q R +V + T +F+ NL + +
Sbjct: 214 QLYHNQSRRFGGPLHHQAQRFRFSPMSVDHMGGMGSVGVPGNSTSGWCIFIYNLGQDADE 273
Query: 223 EDLKKIFGEYGTITSAVVMRD-GDGKSKCFGFVNFENADDAAKAVEALNGKKFDDR 277
L ++FG +G +T+ V+RD K K FGFV N ++AA A+ +LNG + D+
Sbjct: 274 SILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDK 329
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 145/317 (45%), Gaps = 43/317 (13%)
Query: 114 KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQ 172
K N+ + L +S+ L FSS G + S K+ D +G S G+GFV + N A+
Sbjct: 32 KDAKTNLIVNYLPQSMSQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYLNPSDAE 91
Query: 173 NAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEY 232
AI LNG+ + K + V + + +T+ K N+++ L ++ T +D++ +F Y
Sbjct: 92 RAISTLNGLRLQSKTIKVSY--ARPSSDTI----KDANLYISGLPKNMTQKDVEDMFSCY 145
Query: 233 GTITSAVVMRD-GDGKSKCFGFVNFENADDAAKAVEALNGK-----------KFDDREWY 280
G I ++ V+ D G S+ F+ F+ +A +AV++LNG+ KF
Sbjct: 146 GRIINSRVLVDQSTGMSRGVAFIRFDKRSEAEEAVKSLNGQKPPGVTEPITVKFAANPNQ 205
Query: 281 VGKAQKKSEREQELKGQFEQAMKETVDKFQ-----------------------GLNLYIK 317
V Q S+ +F + +F+ G ++I
Sbjct: 206 VKNTQIISQLYHNQSRRFGGPLHHQAQRFRFSPMSVDHMGGMGSVGVPGNSTSGWCIFIY 265
Query: 318 NLGDSIDDEKLKELFSEFGTITSCKVMRD-PSGISKGSGFVAFSTPEEASRALAEMNGKM 376
NLG D+ L ++F FG +T+ KV+RD + KG GFV + EEA+ A+A +NG
Sbjct: 266 NLGQDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYR 325
Query: 377 IVSKPLYVAVAQRKEER 393
+ K L V+ K +
Sbjct: 326 LGDKILQVSFKTSKGHK 342
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 13/111 (11%)
Query: 6 VQHQAQ-----------MSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVG 54
+ HQAQ M G V G GN +++ +L + +S L+ +F G
Sbjct: 227 LHHQAQRFRFSPMSVDHMGGMGSV--GVPGNSTSGWCIFIYNLGQDADESILWQMFGPFG 284
Query: 55 QVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMY 105
V +V+V RD +T + G+G+V N +AA A+ LN L +K +++ +
Sbjct: 285 AVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKILQVSF 335
>gi|38345560|emb|CAE03434.2| OSJNBa0032F06.17 [Oryza sativa Japonica Group]
Length = 924
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/389 (27%), Positives = 182/389 (46%), Gaps = 53/389 (13%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
T+LYVG+L +V +L +LF GQ++ RV D T S GYG+V Y++P A+ A+
Sbjct: 209 TNLYVGNLPASVGSHKLIELFLPFGQIVRSRVVDDCFTGLSQGYGFVKYSDPRCASEAIK 268
Query: 90 VLNFTPLNNKSIRIMYS--------HRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
+N + ++++ + + PS +++ +++ NL S++ L F F
Sbjct: 269 RMNGRLVEGTALKVRVTGFPSSEDNSQQPS-KETDMAKLYVCNLSLSMNTDRLIHLFLPF 327
Query: 142 GNILSCKIATD-GSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFV---------- 190
G + + K+A D +G SKG+GFVQ+ + A A+ LNG L++ +++ V
Sbjct: 328 GEVTNAKVAKDHTTGLSKGYGFVQYSSPHHAAEAVIHLNGRLVDGRKIEVRVSGIPSTLP 387
Query: 191 -----------GHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAV 239
+ + +N++V N+ S + L ++F +G IT A
Sbjct: 388 NSAVESPSTTRNSAVESPSTTRTVKEIDMSNLYVCNMPSSIDTKKLVELFLPFGKITHAR 447
Query: 240 VMRDGDGKS-KCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQF 298
V+ D D S K +GF+ F +++ A KA+ A+NG V + G
Sbjct: 448 VVADPDTFSAKGYGFIKFTDSESATKAIAAMNGALVGGEMIIV-----------RVAGLS 496
Query: 299 EQAMKETVDKFQGLN---LYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSG 355
A V Q +N LYI NL S+ +K+ LF+ FG IT KV+ ++
Sbjct: 497 PSASISAVQTTQDINKSRLYITNLPRSMTADKMVNLFAPFGQIT--KVL-----MNLEYS 549
Query: 356 FVAFSTPEEASRALAEMNGKMIVSKPLYV 384
V ++ A++A+ M+G M+ K L V
Sbjct: 550 LVWYADAPSATKAVQHMDGYMVEGKRLVV 578
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/312 (31%), Positives = 152/312 (48%), Gaps = 22/312 (7%)
Query: 98 NKSIRIMYSHRDPSIRKSG-------TGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+K + H PS + G N+++ NL S+ L + F FG I+ ++
Sbjct: 182 DKHLHKKQEHTPPSFPQDGGKLKEVDNTNLYVGNLPASVGSHKLIELFLPFGQIVRSRVV 241
Query: 151 TDG-SGQSKGFGFVQFENKESAQNAIDKLNGMLINDK--QVFVGHFLRKQERETVAIK-T 206
D +G S+G+GFV++ + A AI ++NG L+ +V V F ++ K T
Sbjct: 242 DDCFTGLSQGYGFVKYSDPRCASEAIKRMNGRLVEGTALKVRVTGFPSSEDNSQQPSKET 301
Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD-GDGKSKCFGFVNFENADDAAKA 265
++V NL S + L +F +G +T+A V +D G SK +GFV + + AA+A
Sbjct: 302 DMAKLYVCNLSLSMNTDRLIHLFLPFGEVTNAKVAKDHTTGLSKGYGFVQYSSPHHAAEA 361
Query: 266 VEALNGKKFDDREWYVG---------KAQKKSEREQELKGQFEQAMKETVDKFQGLNLYI 316
V LNG+ D R+ V + +S + TV + NLY+
Sbjct: 362 VIHLNGRLVDGRKIEVRVSGIPSTLPNSAVESPSTTRNSAVESPSTTRTVKEIDMSNLYV 421
Query: 317 KNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGIS-KGSGFVAFSTPEEASRALAEMNGK 375
N+ SID +KL ELF FG IT +V+ DP S KG GF+ F+ E A++A+A MNG
Sbjct: 422 CNMPSSIDTKKLVELFLPFGKITHARVVADPDTFSAKGYGFIKFTDSESATKAIAAMNGA 481
Query: 376 MIVSKPLYVAVA 387
++ + + V VA
Sbjct: 482 LVGGEMIIVRVA 493
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 170/390 (43%), Gaps = 34/390 (8%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
++LYV ++ ++ +L +LF G++ RV D T + GYG++ + + A +A+
Sbjct: 417 SNLYVCNMPSSIDTKKLVELFLPFGKITHARVVADPDTFSAKGYGFIKFTDSESATKAIA 476
Query: 90 VLNFTPLNNKSIRIMYSHRDPSIRKSGT--------GNIFIKNLDKSIDHKALHDTFSSF 141
+N + + I + + PS S ++I NL +S+ + + F+ F
Sbjct: 477 AMNGALVGGEMIIVRVAGLSPSASISAVQTTQDINKSRLYITNLPRSMTADKMVNLFAPF 536
Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
G I + + + V + + SA A+ ++G ++ K++ V ++ E T
Sbjct: 537 GQITKVLMNLE-------YSLVWYADAPSATKAVQHMDGYMVEGKRLVV----KRSELCT 585
Query: 202 VAI---------KTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFG 252
+ N++V + S T++ +F +G + A + R + +G
Sbjct: 586 TNASQAGGKPIKEIDMANLYVGRVPSSLTEDQFIDLFRPFGRVVQARMFR-----FQRYG 640
Query: 253 FVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGL 312
V F+N AA A++ L+G + V A +E Q +
Sbjct: 641 MVRFDNPSCAAAAIDHLDGYQIGGSILAVRVAGLPAESNAAKGALTSQMSSNEQGQIDMT 700
Query: 313 NLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP-SGISKGSGFVAFSTPEEASRALAE 371
NLY+ +L +++E+L +LF G IT KV+ + +G+SKG GFV F+ A+ AL
Sbjct: 701 NLYVSHLPSYVNNERLIDLFLPCGQITQAKVVVERYTGVSKGFGFVKFADAYSAAVALTH 760
Query: 372 MNGKMIVSKPLYVAVAQRKEERRARLQAQF 401
MNG + L V +A + + A F
Sbjct: 761 MNGYPLDGHVLEVRIAGVHPDAMSSYMAHF 790
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 108/247 (43%), Gaps = 48/247 (19%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
+LYVG + ++T+ Q DLF G+V+ R+ R +R YG V + NP+ AA A+D
Sbjct: 603 NLYVGRVPSSLTEDQFIDLFRPFGRVVQARMFR---FQR---YGMVRFDNPSCAAAAIDH 656
Query: 91 LNFTPLNNK--SIRI-----------------MYSHRDPSIRKSGTGNIFIKNLDKSIDH 131
L+ + ++R+ M S+ I + N+++ +L +++
Sbjct: 657 LDGYQIGGSILAVRVAGLPAESNAAKGALTSQMSSNEQGQIDMT---NLYVSHLPSYVNN 713
Query: 132 KALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQV-- 188
+ L D F G I K+ + +G SKGFGFV+F + SA A+ +NG ++ +
Sbjct: 714 ERLIDLFLPCGQITQAKVVVERYTGVSKGFGFVKFADAYSAAVALTHMNGYPLDGHVLEV 773
Query: 189 ----------------FVGHF-LRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGE 231
F HF + + V I T + + +TT E+L ++
Sbjct: 774 RIAGVHPDAMSSYMAHFYSHFTMHDPAKAAVGIPTSYWPHYYDESAYNTTAENLGQVTTT 833
Query: 232 YGTITSA 238
T SA
Sbjct: 834 SATDASA 840
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 50/111 (45%), Gaps = 8/111 (7%)
Query: 26 QFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAA 85
Q T+LYV L V + +L DLF GQ+ +V + T S G+G+V +A+ AA
Sbjct: 696 QIDMTNLYVSHLPSYVNNERLIDLFLPCGQITQAKVVVERYTGVSKGFGFVKFADAYSAA 755
Query: 86 RALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHD 136
AL +N PL+ + + + P S + + H +HD
Sbjct: 756 VALTHMNGYPLDGHVLEVRIAGVHPDAMSSYMAHFY--------SHFTMHD 798
>gi|71896483|ref|NP_001025497.1| ELAV-like protein 3 [Xenopus (Silurana) tropicalis]
gi|123913100|sp|Q28FX0.1|ELAV3_XENTR RecName: Full=ELAV-like protein 3; AltName: Full=Protein ElrC
gi|89266725|emb|CAJ83874.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu
antigen C) [Xenopus (Silurana) tropicalis]
Length = 343
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 150/316 (47%), Gaps = 59/316 (18%)
Query: 12 MSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSL 71
++G NG A + T+L V L N+T + LF +G++ S ++ RD T +SL
Sbjct: 23 LNGTNGAADDSK------TNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQSL 76
Query: 72 GYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSH-RDPSIRKSGTGNIFIKNLDKSID 130
GYG+VNY +P DA +A++ LN L K+I++ Y+ SIR + N+++ +L K+++
Sbjct: 77 GYGFVNYVDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDA---NLYVSSLPKTMN 133
Query: 131 HKALHDTFSSFGNILSCKIATD--GSGQSKGFGFVQFENKESAQNAIDKLNGM------- 181
K + FS +G I++ +I D S+G GF++F+ + A+ AI LNG
Sbjct: 134 QKEMEQLFSQYGRIITSRILVDQVTGSVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGASE 193
Query: 182 -----LIND-----KQVFVGHFLRKQERET---------------VAIKTKFN------- 209
N+ Q + H + R + I + N
Sbjct: 194 PITVKFANNPSQKTGQALLTHLYQTTARRYTGPLHHQTQRFRFSPITIDSVTNLAGVSLT 253
Query: 210 -------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD-GDGKSKCFGFVNFENADD 261
+FV NL + L ++FG +G +T+ V+RD K K FGFV N D+
Sbjct: 254 GPTTAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDE 313
Query: 262 AAKAVEALNGKKFDDR 277
AA A+ +LNG + DR
Sbjct: 314 AAMAIASLNGYRLGDR 329
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 151/313 (48%), Gaps = 44/313 (14%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDK 177
N+ + L +++ + F S G I SCK+ D +GQS G+GFV + + A AI+
Sbjct: 36 NLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPNDADKAINT 95
Query: 178 LNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITS 237
LNG+ + K + V + + +I+ N++V +L ++ ++++++F +YG I +
Sbjct: 96 LNGLKLQTKTIKVSY----ARPSSASIRDA--NLYVSSLPKTMNQKEMEQLFSQYGRIIT 149
Query: 238 AVVMRD--GDGKSKCFGFVNFENADDAAKAVEALNGKK------------FDDREWYVGK 283
+ ++ D S+ GF+ F+ +A +A++ LNG+K ++ G+
Sbjct: 150 SRILVDQVTGSVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGASEPITVKFANNPSQKTGQ 209
Query: 284 A------QKKSER------EQELKGQFEQAMKETVDKFQGLNL----------YIKNLGD 321
A Q + R Q + +F ++V G++L ++ NL
Sbjct: 210 ALLTHLYQTTARRYTGPLHHQTQRFRFSPITIDSVTNLAGVSLTGPTTAGWCIFVYNLSP 269
Query: 322 SIDDEKLKELFSEFGTITSCKVMRD-PSGISKGSGFVAFSTPEEASRALAEMNGKMIVSK 380
D+ L +LF FG +T+ KV+RD + KG GFV + +EA+ A+A +NG + +
Sbjct: 270 EADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDR 329
Query: 381 PLYVAVAQRKEER 393
L V+ K+ +
Sbjct: 330 VLQVSFKTSKQHK 342
Score = 46.2 bits (108), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 42/74 (56%)
Query: 32 LYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVL 91
++V +L +S L+ LF G V +V+V RD +T + G+G+V N +AA A+ L
Sbjct: 262 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 321
Query: 92 NFTPLNNKSIRIMY 105
N L ++ +++ +
Sbjct: 322 NGYRLGDRVLQVSF 335
>gi|301771944|ref|XP_002921434.1| PREDICTED: ELAV-like protein 3-like [Ailuropoda melanoleuca]
Length = 350
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 149/314 (47%), Gaps = 54/314 (17%)
Query: 15 PNGVAAGASG-NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGY 73
PNG G +G T+L V L N+T + LF +G + S ++ RD T +SLGY
Sbjct: 26 PNGPLLGTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGY 85
Query: 74 GYVNYANPADAARALDVLNFTPLNNKSIRIMYSH-RDPSIRKSGTGNIFIKNLDKSIDHK 132
G+VNY++P DA +A++ LN L K+I++ Y+ SIR + N+++ L K++ K
Sbjct: 86 GFVNYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDA---NLYVSGLPKTMSQK 142
Query: 133 ALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKLNGM---------- 181
+ FS +G I++ +I D +G S+G GF++F+ + A+ AI LNG
Sbjct: 143 EMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPIT 202
Query: 182 --LIND-----KQVFVGHFLRKQERETVA------IKTKFNNV----------------- 211
N+ Q + H + R + +F+ +
Sbjct: 203 VKFANNPSQKTGQALLTHLYQSSARRYAGPLHHQTQRFRFSPIAIDGMSGLAGVGLSGGA 262
Query: 212 -------FVKNLDESTTDEDLKKIFGEYGTITSAVVMRD-GDGKSKCFGFVNFENADDAA 263
FV NL + L ++FG +G +T+ V+RD K K FGFV N D+AA
Sbjct: 263 AGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAA 322
Query: 264 KAVEALNGKKFDDR 277
A+ +LNG + +R
Sbjct: 323 MAIASLNGYRLGER 336
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 150/316 (47%), Gaps = 50/316 (15%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDK 177
N+ + L +++ F S G+I SCK+ D +GQS G+GFV + + A AI+
Sbjct: 43 NLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINT 102
Query: 178 LNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYG-TIT 236
LNG+ + K + V + + +I+ N++V L ++ + ++++++F +YG IT
Sbjct: 103 LNGLKLQTKTIKVSY----ARPSSASIRDA--NLYVSGLPKTMSQKEMEQLFSQYGRIIT 156
Query: 237 SAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKK------------FDDREWYVGKA 284
S +++ G S+ GF+ F+ +A +A++ LNG+K ++ G+A
Sbjct: 157 SRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQA 216
Query: 285 ------QKKSER------EQELKGQFEQAMKETVDKFQGLN--------------LYIKN 318
Q + R Q + +F +D GL +++ N
Sbjct: 217 LLTHLYQSSARRYAGPLHHQTQRFRFSPI---AIDGMSGLAGVGLSGGAAGAGWCIFVYN 273
Query: 319 LGDSIDDEKLKELFSEFGTITSCKVMRD-PSGISKGSGFVAFSTPEEASRALAEMNGKMI 377
L D+ L +LF FG +T+ KV+RD + KG GFV + +EA+ A+A +NG +
Sbjct: 274 LSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRL 333
Query: 378 VSKPLYVAVAQRKEER 393
+ L V+ K+ +
Sbjct: 334 GERVLQVSFKTSKQHK 349
Score = 46.2 bits (108), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%)
Query: 32 LYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVL 91
++V +L +S L+ LF G V +V+V RD +T + G+G+V N +AA A+ L
Sbjct: 269 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 328
Query: 92 NFTPLNNKSIRIMY 105
N L + +++ +
Sbjct: 329 NGYRLGERVLQVSF 342
>gi|62897393|dbj|BAD96637.1| PABPC4 protein variant [Homo sapiens]
Length = 371
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/96 (64%), Positives = 80/96 (83%), Gaps = 1/96 (1%)
Query: 308 KFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASR 367
++QG+NLYIKNL D+IDDEKL++ FS FG+ITS KVM + G SKG GFV FS+PEEA++
Sbjct: 1 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATK 59
Query: 368 ALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQ 403
A+ EMNG+++ SKPLYVA+AQRKEER+A L Q+ Q
Sbjct: 60 AVTEMNGRIVGSKPLYVALAQRKEERKAHLTNQYMQ 95
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 61/91 (67%), Gaps = 1/91 (1%)
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEAL 269
N+++KNLD++ DE L+K F +G+ITSA VM + DG+SK FGFV F + ++A KAV +
Sbjct: 6 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEM 64
Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQ 300
NG+ + YV AQ+K ER+ L Q+ Q
Sbjct: 65 NGRIVGSKPLYVALAQRKEERKAHLTNQYMQ 95
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 59/75 (78%), Gaps = 2/75 (2%)
Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
P+TA + LA A P++Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 280 PLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPE 337
Query: 555 ALKAKVAEAMEVLRS 569
+L++KV EA VL++
Sbjct: 338 SLRSKVDEAAAVLQA 352
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 59/98 (60%), Gaps = 6/98 (6%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKL 178
N++IKNLD +ID + L FS FG+I S K+ + G+SKGFGFV F + E A A+ ++
Sbjct: 6 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEM 64
Query: 179 NGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNL 216
NG ++ K ++V RK+ER K N +++ +
Sbjct: 65 NGRIVGSKPLYVALAQRKEER-----KAHLTNQYMQRV 97
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 54/100 (54%), Gaps = 3/100 (3%)
Query: 26 QFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAA 85
++ +LY+ +LD + D +L FS G + S +V L RS G+G+V +++P +A
Sbjct: 1 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVM--LEDGRSKGFGFVCFSSPEEAT 58
Query: 86 RALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNL 125
+A+ +N + +K + + + R RK+ N +++ +
Sbjct: 59 KAVTEMNGRIVGSKPLYVALAQRK-EERKAHLTNQYMQRV 97
>gi|221486340|gb|EEE24601.1| splicing factor, putative [Toxoplasma gondii GT1]
Length = 576
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 102/170 (60%), Gaps = 2/170 (1%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
+LY+G+LD V D L++LF Q G V +V V RD T GYG+V + N DA AL +
Sbjct: 30 TLYIGNLDSQVDDDLLWELFVQCGPVRTVSVPRDKLTGNHQGYGFVEFRNEVDADYALKL 89
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+N L K++R+ S +D G N+F+ NLD +D K ++DTFS+FGNI+S KI
Sbjct: 90 MNMVKLYGKALRLNKSAQDRRNFDVGA-NVFLGNLDPDVDEKTIYDTFSAFGNIISAKIM 148
Query: 151 TDG-SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER 199
D +G S+GFGFV F+ E++ A+ +NG I ++ + V + +K R
Sbjct: 149 RDPETGLSRGFGFVSFDTFEASDAALAAMNGQFICNRPIHVSYAYKKDTR 198
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 115/210 (54%), Gaps = 23/210 (10%)
Query: 211 VFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENADDAAKAVEAL 269
+++ NLD D+ L ++F + G + + V RD G + +GFV F N DA A++ +
Sbjct: 31 LYIGNLDSQVDDDLLWELFVQCGPVRTVSVPRDKLTGNHQGYGFVEFRNEVDADYALKLM 90
Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLK 329
N K GKA + ++ Q+ + F+ G N+++ NL +D++ +
Sbjct: 91 NMVKL------YGKALRLNKSAQDRR-NFDV----------GANVFLGNLDPDVDEKTIY 133
Query: 330 ELFSEFGTITSCKVMRDP-SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
+ FS FG I S K+MRDP +G+S+G GFV+F T E + ALA MNG+ I ++P++V+ A
Sbjct: 134 DTFSAFGNIISAKIMRDPETGLSRGFGFVSFDTFEASDAALAAMNGQFICNRPIHVSYAY 193
Query: 389 RKEERRARLQAQFSQM----RPVAMGPSVP 414
+K+ R R + ++ RP + P+ P
Sbjct: 194 KKDTRGERHGSAAERLLAANRPQIINPNAP 223
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 91/176 (51%), Gaps = 7/176 (3%)
Query: 120 IFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKL 178
++I NLD +D L + F G + + + D +G +G+GFV+F N+ A A+ +
Sbjct: 31 LYIGNLDSQVDDDLLWELFVQCGPVRTVSVPRDKLTGNHQGYGFVEFRNEVDADYALKLM 90
Query: 179 NGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSA 238
N + + K + + Q+R + NVF+ NLD ++ + F +G I SA
Sbjct: 91 NMVKLYGKALRLNK--SAQDRRNFDVGA---NVFLGNLDPDVDEKTIYDTFSAFGNIISA 145
Query: 239 VVMRDGD-GKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQE 293
+MRD + G S+ FGFV+F+ + + A+ A+NG+ +R +V A KK R +
Sbjct: 146 KIMRDPETGLSRGFGFVSFDTFEASDAALAAMNGQFICNRPIHVSYAYKKDTRGER 201
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 302 MKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP-SGISKGSGFVAFS 360
+ + ++ Q LYI NL +DD+ L ELF + G + + V RD +G +G GFV F
Sbjct: 19 ITQVYERNQDATLYIGNLDSQVDDDLLWELFVQCGPVRTVSVPRDKLTGNHQGYGFVEFR 78
Query: 361 TPEEASRALAEMN 373
+A AL MN
Sbjct: 79 NEVDADYALKLMN 91
>gi|221508124|gb|EEE33711.1| splicing factor, putative [Toxoplasma gondii VEG]
Length = 576
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 102/170 (60%), Gaps = 2/170 (1%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
+LY+G+LD V D L++LF Q G V +V V RD T GYG+V + N DA AL +
Sbjct: 30 TLYIGNLDSQVDDDLLWELFVQCGPVRTVSVPRDKLTGNHQGYGFVEFRNEVDADYALKL 89
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+N L K++R+ S +D G N+F+ NLD +D K ++DTFS+FGNI+S KI
Sbjct: 90 MNMVKLYGKALRLNKSAQDRRNFDVGA-NVFLGNLDPDVDEKTIYDTFSAFGNIISAKIM 148
Query: 151 TDG-SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER 199
D +G S+GFGFV F+ E++ A+ +NG I ++ + V + +K R
Sbjct: 149 RDPETGLSRGFGFVSFDTFEASDAALAAMNGQFICNRPIHVSYAYKKDTR 198
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 115/210 (54%), Gaps = 23/210 (10%)
Query: 211 VFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENADDAAKAVEAL 269
+++ NLD D+ L ++F + G + + V RD G + +GFV F N DA A++ +
Sbjct: 31 LYIGNLDSQVDDDLLWELFVQCGPVRTVSVPRDKLTGNHQGYGFVEFRNEVDADYALKLM 90
Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLK 329
N K GKA + ++ Q+ + F+ G N+++ NL +D++ +
Sbjct: 91 NMVKL------YGKALRLNKSAQDRR-NFDV----------GANVFLGNLDPDVDEKTIY 133
Query: 330 ELFSEFGTITSCKVMRDP-SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
+ FS FG I S K+MRDP +G+S+G GFV+F T E + ALA MNG+ I ++P++V+ A
Sbjct: 134 DTFSAFGNIISAKIMRDPETGLSRGFGFVSFDTFEASDAALAAMNGQFICNRPIHVSYAY 193
Query: 389 RKEERRARLQAQFSQM----RPVAMGPSVP 414
+K+ R R + ++ RP + P+ P
Sbjct: 194 KKDTRGERHGSAAERLLAANRPQIINPNAP 223
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 91/176 (51%), Gaps = 7/176 (3%)
Query: 120 IFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKL 178
++I NLD +D L + F G + + + D +G +G+GFV+F N+ A A+ +
Sbjct: 31 LYIGNLDSQVDDDLLWELFVQCGPVRTVSVPRDKLTGNHQGYGFVEFRNEVDADYALKLM 90
Query: 179 NGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSA 238
N + + K + + Q+R + NVF+ NLD ++ + F +G I SA
Sbjct: 91 NMVKLYGKALRLNK--SAQDRRNFDVGA---NVFLGNLDPDVDEKTIYDTFSAFGNIISA 145
Query: 239 VVMRDGD-GKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQE 293
+MRD + G S+ FGFV+F+ + + A+ A+NG+ +R +V A KK R +
Sbjct: 146 KIMRDPETGLSRGFGFVSFDTFEASDAALAAMNGQFICNRPIHVSYAYKKDTRGER 201
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 302 MKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP-SGISKGSGFVAFS 360
+ + ++ Q LYI NL +DD+ L ELF + G + + V RD +G +G GFV F
Sbjct: 19 ITQVYERNQDATLYIGNLDSQVDDDLLWELFVQCGPVRTVSVPRDKLTGNHQGYGFVEFR 78
Query: 361 TPEEASRALAEMN 373
+A AL MN
Sbjct: 79 NEVDADYALKLMN 91
>gi|237833669|ref|XP_002366132.1| splicing factor, putative [Toxoplasma gondii ME49]
gi|211963796|gb|EEA98991.1| splicing factor, putative [Toxoplasma gondii ME49]
Length = 576
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 102/170 (60%), Gaps = 2/170 (1%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
+LY+G+LD V D L++LF Q G V +V V RD T GYG+V + N DA AL +
Sbjct: 30 TLYIGNLDSQVDDDLLWELFVQCGPVRTVSVPRDKLTGNHQGYGFVEFRNEVDADYALKL 89
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
+N L K++R+ S +D G N+F+ NLD +D K ++DTFS+FGNI+S KI
Sbjct: 90 MNMVKLYGKALRLNKSAQDRRNFDVGA-NVFLGNLDPDVDEKTIYDTFSAFGNIISAKIM 148
Query: 151 TDG-SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER 199
D +G S+GFGFV F+ E++ A+ +NG I ++ + V + +K R
Sbjct: 149 RDPETGLSRGFGFVSFDTFEASDAALAAMNGQFICNRPIHVSYAYKKDTR 198
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 118/218 (54%), Gaps = 23/218 (10%)
Query: 211 VFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENADDAAKAVEAL 269
+++ NLD D+ L ++F + G + + V RD G + +GFV F N DA A++ +
Sbjct: 31 LYIGNLDSQVDDDLLWELFVQCGPVRTVSVPRDKLTGNHQGYGFVEFRNEVDADYALKLM 90
Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLK 329
N K GKA + ++ Q+ + F+ G N+++ NL +D++ +
Sbjct: 91 NMVKL------YGKALRLNKSAQDRR-NFDV----------GANVFLGNLDPDVDEKTIY 133
Query: 330 ELFSEFGTITSCKVMRDP-SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
+ FS FG I S K+MRDP +G+S+G GFV+F T E + ALA MNG+ I ++P++V+ A
Sbjct: 134 DTFSAFGNIISAKIMRDPETGLSRGFGFVSFDTFEASDAALAAMNGQFICNRPIHVSYAY 193
Query: 389 RKEERRARLQAQFSQM----RPVAMGPSVPPRMPMYPP 422
+K+ R R + ++ RP + P+ P + PP
Sbjct: 194 KKDTRGERHGSAAERLLAANRPQIINPNAPATGGVKPP 231
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 91/176 (51%), Gaps = 7/176 (3%)
Query: 120 IFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKL 178
++I NLD +D L + F G + + + D +G +G+GFV+F N+ A A+ +
Sbjct: 31 LYIGNLDSQVDDDLLWELFVQCGPVRTVSVPRDKLTGNHQGYGFVEFRNEVDADYALKLM 90
Query: 179 NGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSA 238
N + + K + + Q+R + NVF+ NLD ++ + F +G I SA
Sbjct: 91 NMVKLYGKALRLNK--SAQDRRNFDVGA---NVFLGNLDPDVDEKTIYDTFSAFGNIISA 145
Query: 239 VVMRDGD-GKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQE 293
+MRD + G S+ FGFV+F+ + + A+ A+NG+ +R +V A KK R +
Sbjct: 146 KIMRDPETGLSRGFGFVSFDTFEASDAALAAMNGQFICNRPIHVSYAYKKDTRGER 201
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 302 MKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP-SGISKGSGFVAFS 360
+ + ++ Q LYI NL +DD+ L ELF + G + + V RD +G +G GFV F
Sbjct: 19 ITQVYERNQDATLYIGNLDSQVDDDLLWELFVQCGPVRTVSVPRDKLTGNHQGYGFVEFR 78
Query: 361 TPEEASRALAEMN 373
+A AL MN
Sbjct: 79 NEVDADYALKLMN 91
>gi|426387251|ref|XP_004060087.1| PREDICTED: ELAV-like protein 3 isoform 1 [Gorilla gorilla gorilla]
gi|355703162|gb|EHH29653.1| Hu-antigen C [Macaca mulatta]
Length = 339
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 149/314 (47%), Gaps = 54/314 (17%)
Query: 15 PNGVAAGASG-NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGY 73
PNG G +G T+L V L N+T + LF +G + S ++ RD T +SLGY
Sbjct: 15 PNGPLLGTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGY 74
Query: 74 GYVNYANPADAARALDVLNFTPLNNKSIRIMYSH-RDPSIRKSGTGNIFIKNLDKSIDHK 132
G+VNY++P DA +A++ LN L K+I++ Y+ SIR + N+++ L K++ K
Sbjct: 75 GFVNYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDA---NLYVSGLPKTMSQK 131
Query: 133 ALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKLNGM---------- 181
+ FS +G I++ +I D +G S+G GF++F+ + A+ AI LNG
Sbjct: 132 EMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPIT 191
Query: 182 --LIND-----KQVFVGHFLRKQERETVA------IKTKFNNV----------------- 211
N+ Q + H + R + +F+ +
Sbjct: 192 VKFANNPSQKTGQALLTHLYQSSARRYAGPLHHQTQRFRFSPIAIDGMSGLAGVGLSGGA 251
Query: 212 -------FVKNLDESTTDEDLKKIFGEYGTITSAVVMRD-GDGKSKCFGFVNFENADDAA 263
FV NL + L ++FG +G +T+ V+RD K K FGFV N D+AA
Sbjct: 252 AGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAA 311
Query: 264 KAVEALNGKKFDDR 277
A+ +LNG + +R
Sbjct: 312 MAIASLNGYRLGER 325
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 150/316 (47%), Gaps = 50/316 (15%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDK 177
N+ + L +++ F S G+I SCK+ D +GQS G+GFV + + A AI+
Sbjct: 32 NLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINT 91
Query: 178 LNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYG-TIT 236
LNG+ + K + V + + +I+ N++V L ++ + ++++++F +YG IT
Sbjct: 92 LNGLKLQTKTIKVSY----ARPSSASIRDA--NLYVSGLPKTMSQKEMEQLFSQYGRIIT 145
Query: 237 SAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKK------------FDDREWYVGKA 284
S +++ G S+ GF+ F+ +A +A++ LNG+K ++ G+A
Sbjct: 146 SRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQA 205
Query: 285 ------QKKSER------EQELKGQFEQAMKETVDKFQGLN--------------LYIKN 318
Q + R Q + +F +D GL +++ N
Sbjct: 206 LLTHLYQSSARRYAGPLHHQTQRFRFSPI---AIDGMSGLAGVGLSGGAAGAGWCIFVYN 262
Query: 319 LGDSIDDEKLKELFSEFGTITSCKVMRD-PSGISKGSGFVAFSTPEEASRALAEMNGKMI 377
L D+ L +LF FG +T+ KV+RD + KG GFV + +EA+ A+A +NG +
Sbjct: 263 LSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRL 322
Query: 378 VSKPLYVAVAQRKEER 393
+ L V+ K+ +
Sbjct: 323 GERVLQVSFKTSKQHK 338
Score = 46.2 bits (108), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%)
Query: 32 LYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVL 91
++V +L +S L+ LF G V +V+V RD +T + G+G+V N +AA A+ L
Sbjct: 258 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 317
Query: 92 NFTPLNNKSIRIMY 105
N L + +++ +
Sbjct: 318 NGYRLGERVLQVSF 331
>gi|225706444|gb|ACO09068.1| ELAV-like protein 1 [Osmerus mordax]
Length = 374
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 146/301 (48%), Gaps = 55/301 (18%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
T+L V L ++T +L LF +G+V S ++ RD SLGYG+VNY NP+DA RA+
Sbjct: 35 TNLIVNYLPQSMTQDELRSLFCSIGEVESAKLIRDKVAGHSLGYGFVNYLNPSDAERAIS 94
Query: 90 VLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKI 149
LN L +K+I++ Y+ PS N++I L K++ K + D F+ +G I++ ++
Sbjct: 95 TLNGLRLQSKTIKVSYAR--PSSDTIKDANLYISGLPKTMTQKDVEDMFARYGRIINSRV 152
Query: 150 ATD------GSGQSKGFGFVQFENKESAQNAIDKLNG----------------------- 180
D G G S+G F++F+ + A++AI LNG
Sbjct: 153 LVDQASGGAGDGLSRGVAFIRFDKRAEAEDAIKDLNGQKPPGASEAITVKFAASPNQAKN 212
Query: 181 ------MLINDKQVFVGHFLRKQER--------------ETVAIKTKFNN---VFVKNLD 217
+ N + F G + +R V++ + ++ +F+ NL
Sbjct: 213 TQLISQLYHNQSRRFGGPVHHQAQRFRFSPMSVDHMSGMSGVSVPSSASSGWCIFIYNLG 272
Query: 218 ESTTDEDLKKIFGEYGTITSAVVMRD-GDGKSKCFGFVNFENADDAAKAVEALNGKKFDD 276
+ + L ++FG +G +T+ V+RD K K FGFV N ++AA A+ +LNG + D
Sbjct: 273 QDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGD 332
Query: 277 R 277
+
Sbjct: 333 K 333
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 149/334 (44%), Gaps = 51/334 (15%)
Query: 114 KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQ 172
K N+ + L +S+ L F S G + S K+ D +G S G+GFV + N A+
Sbjct: 31 KDAKTNLIVNYLPQSMTQDELRSLFCSIGEVESAKLIRDKVAGHSLGYGFVNYLNPSDAE 90
Query: 173 NAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEY 232
AI LNG+ + K + V + + +T+ K N+++ L ++ T +D++ +F Y
Sbjct: 91 RAISTLNGLRLQSKTIKVSY--ARPSSDTI----KDANLYISGLPKTMTQKDVEDMFARY 144
Query: 233 GTITSAVVMRD------GDGKSKCFGFVNFENADDAAKAVEALNGK-----------KFD 275
G I ++ V+ D GDG S+ F+ F+ +A A++ LNG+ KF
Sbjct: 145 GRIINSRVLVDQASGGAGDGLSRGVAFIRFDKRAEAEDAIKDLNGQKPPGASEAITVKFA 204
Query: 276 DREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQ-----------------------GL 312
Q S+ +F + +F+ G
Sbjct: 205 ASPNQAKNTQLISQLYHNQSRRFGGPVHHQAQRFRFSPMSVDHMSGMSGVSVPSSASSGW 264
Query: 313 NLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRD-PSGISKGSGFVAFSTPEEASRALAE 371
++I NLG D+ L ++F FG +T+ KV+RD + KG GFV + EEA+ A+A
Sbjct: 265 CIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIAS 324
Query: 372 MNGKMIVSKPL---YVAVAQRKEERRARLQAQFS 402
+NG + K L ++ + R++R+ FS
Sbjct: 325 LNGYRLGDKILQTRFIPLIAPVSSRQSRIPPGFS 358
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
Query: 293 ELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP-SGIS 351
++ +E M K NL + L S+ ++L+ LF G + S K++RD +G S
Sbjct: 16 DMSNGYEDHMGGDEGKDAKTNLIVNYLPQSMTQDELRSLFCSIGEVESAKLIRDKVAGHS 75
Query: 352 KGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
G GFV + P +A RA++ +NG + SK + V+ A+
Sbjct: 76 LGYGFVNYLNPSDAERAISTLNGLRLQSKTIKVSYAR 112
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 55/111 (49%), Gaps = 13/111 (11%)
Query: 6 VQHQAQ-----------MSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVG 54
V HQAQ MSG +GV+ +S + +Y +L + + L+ +F G
Sbjct: 231 VHHQAQRFRFSPMSVDHMSGMSGVSVPSSASSGWCIFIY--NLGQDADEGILWQMFGPFG 288
Query: 55 QVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMY 105
V +V+V RD +T + G+G+V N +AA A+ LN L +K ++ +
Sbjct: 289 AVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKILQTRF 339
>gi|302308066|ref|NP_984845.2| AEL016Cp [Ashbya gossypii ATCC 10895]
gi|299789279|gb|AAS52669.2| AEL016Cp [Ashbya gossypii ATCC 10895]
gi|374108067|gb|AEY96974.1| FAEL016Cp [Ashbya gossypii FDAG1]
Length = 678
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 106/405 (26%), Positives = 177/405 (43%), Gaps = 74/405 (18%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
+L++GDLD VT+ L D F++ +S ++C D +T++SLGYGY+N++N DA R ++
Sbjct: 117 ALFIGDLDEKVTEKNLRDTFNKFDSFVSAKICIDSNTKKSLGYGYLNFSNEEDAERVIEE 176
Query: 91 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNL---DKSIDHKALHDTFSSFGNILSC 147
N+ P+ + +RIM S R+ RK+ N+F NL + ++ + +D F FG ILSC
Sbjct: 177 FNYIPIFGREVRIMPSLRNSFYRKNIGTNVFFSNLPLENLALTTRVFYDAFKKFGKILSC 236
Query: 148 KIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVG-HFLRKQER------- 199
K+ + K GFV FE +A+ AI + NG + G HF R +
Sbjct: 237 KL-----DRRKNIGFVYFEKDSAAKQAIAEYNGKEFFGNNILCGIHFDRNVRKSPEFEKR 291
Query: 200 -----ETVAIKTKF-------------------NNVFVKNLDESTTDEDLKKIFGEYGTI 235
+ +K N VF+KNL + + L F + G +
Sbjct: 292 KARLEDMTLVKESLVMDNNQEIPSGSKMKGPHPNAVFIKNLPLNPDSDLLLDYFSQIGPV 351
Query: 236 TSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQK--------- 286
S + + + + F+ F+ DA A++ LN + R + +AQK
Sbjct: 352 KS-IFTSNVSKLNSAWAFITFKKGSDAQDAIDNLNHSQLLGRTIELSRAQKNFQTDIDAA 410
Query: 287 -----------KSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEF 335
+S Q + K TV Y+ +L SI E+ + F
Sbjct: 411 NAGAGNNSSTTRSNDSDPCSTQHSSSYKLTV--------YLSSLS-SICSEQFLQCFCAE 461
Query: 336 GTITSCKV---MRDPSGISKGSGFVAFSTPEEASRALAEMNGKMI 377
I + ++ D + ++ SGFV T +A+R +N K++
Sbjct: 462 ERIKTKRISIRFYDEATLT-FSGFVQCQTRNDANRLFELLNNKLL 505
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 148/311 (47%), Gaps = 30/311 (9%)
Query: 101 IRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATD-GSGQSKG 159
+++ S P++ +FI +LD+ + K L DTF+ F + +S KI D + +S G
Sbjct: 99 VKLGRSKDSPTLTSKKLVALFIGDLDEKVTEKNLRDTFNKFDSFVSAKICIDSNTKKSLG 158
Query: 160 FGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQ-ERETVAIKTKFNNVFVKNLDE 218
+G++ F N+E A+ I++ N + I ++V + LR R+ + F+N+ ++NL
Sbjct: 159 YGYLNFSNEEDAERVIEEFNYIPIFGREVRIMPSLRNSFYRKNIGTNVFFSNLPLENL-- 216
Query: 219 STTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDRE 278
+ T F ++G I S + R K GFV FE A +A+ NGK+F
Sbjct: 217 ALTTRVFYDAFKKFGKILSCKLDR-----RKNIGFVYFEKDSAAKQAIAEYNGKEFFGNN 271
Query: 279 WYVG----KAQKKSEREQELKGQFEQA--MKETV-----------DKFQGLN---LYIKN 318
G + +KS ++ K + E +KE++ K +G + ++IKN
Sbjct: 272 ILCGIHFDRNVRKSPEFEKRKARLEDMTLVKESLVMDNNQEIPSGSKMKGPHPNAVFIKN 331
Query: 319 LGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIV 378
L + D + L + FS+ G + S + S ++ F+ F +A A+ +N ++
Sbjct: 332 LPLNPDSDLLLDYFSQIGPVKSI-FTSNVSKLNSAWAFITFKKGSDAQDAIDNLNHSQLL 390
Query: 379 SKPLYVAVAQR 389
+ + ++ AQ+
Sbjct: 391 GRTIELSRAQK 401
>gi|406602053|emb|CCH46373.1| Polyadenylate-binding protein, cytoplasmic and nuclear
[Wickerhamomyces ciferrii]
Length = 694
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 112/182 (61%), Gaps = 5/182 (2%)
Query: 118 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDK 177
GNI+++ L I + L F FG I S KI D G+SKG+GF+ + + SA +AI K
Sbjct: 129 GNIYVRGLGPEITTEDLFKIFEPFGEITSSKIVNDEFGRSKGYGFINYSDGSSADDAISK 188
Query: 178 LNGMLINDKQVFVGHFLRKQER-ETVAI-KTKFNNVFVKNLDESTTDEDLKKIFGEYGTI 235
LNG+L+N ++++ H + K+ER + + K+ F N+++KNL T + + +F ++G I
Sbjct: 189 LNGLLVNGSKLYLNHHIAKKERIQRIDFEKSNFTNLYIKNLPIDYTIDQFESLFAKFGEI 248
Query: 236 TSAVV--MRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWY-VGKAQKKSEREQ 292
+S+ + + DGD SK FGF+NF+N + A A+E+LN + ++ V +AQ++ ER +
Sbjct: 249 SSSFLPDLNDGDQTSKRFGFINFKNHESAISAIESLNNFEISPNQFLSVSRAQRRDERNE 308
Query: 293 EL 294
+
Sbjct: 309 QF 310
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 114/428 (26%), Positives = 177/428 (41%), Gaps = 63/428 (14%)
Query: 187 QVFVGHFLRKQERETVAIK----TKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMR 242
Q+F F K + ++++ T N++V+ L T EDL KIF +G ITS+ ++
Sbjct: 103 QIFEKSFKLKFPQVEISVEFDALTHPGNIYVRGLGPEITTEDLFKIFEPFGEITSSKIVN 162
Query: 243 DGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAM 302
D G+SK +GF+N+ + A A+ LNG + + Y+ K ER Q + FE++
Sbjct: 163 DEFGRSKGYGFINYSDGSSADDAISKLNGLLVNGSKLYLNHHIAKKERIQRI--DFEKS- 219
Query: 303 KETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKV--MRDPSGISKGSGFVAFS 360
NLYIKNL ++ + LF++FG I+S + + D SK GF+ F
Sbjct: 220 -------NFTNLYIKNLPIDYTIDQFESLFAKFGEISSSFLPDLNDGDQTSKRFGFINFK 272
Query: 361 TPEEASRALAEMNGKMIV-SKPLYVAVAQRKEERRARLQ----------------AQFSQ 403
E A A+ +N I ++ L V+ AQR++ER + QF Q
Sbjct: 273 NHESAISAIESLNNFEISPNQFLSVSRAQRRDERNEQFHNNLNPKNSNNYQTTPYGQF-Q 331
Query: 404 MRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPP-QMPPRGHAYRYPLGRNM-- 460
+R ++ P P + PP S G P I P PP H+ N
Sbjct: 332 IRNNSISPQPAPILFQSPPITSQ-------GSIPGIITSPITQPPVPHSIEAITSPNFIP 384
Query: 461 -QDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALST-ALANASPEQQRTLLGES 518
Q P + P + G+P + P P S + N +P ++L S
Sbjct: 385 NQLIPPSTASTVTSIPPTGVPNGLPTTTIQLPIPAPDQQPSNLYVRNLAPSIDDSILHSS 444
Query: 519 LYPLVEQLERDAAAKVTGMLLEMDQTE-----VLHLLESPEALKAKVAEAMEVLR----S 569
P V+ ++ D+ E + SPEA +A +A VL
Sbjct: 445 FAPF--------GIIVSAKIMTTDEGESRGYGFVCFRTSPEASRALIAMHGNVLHGQMLH 496
Query: 570 VAQQQANN 577
V+ Q NN
Sbjct: 497 VSFAQKNN 504
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 84/176 (47%), Gaps = 32/176 (18%)
Query: 310 QGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRAL 369
Q NLY++NL SIDD L F+ FG I S K+M G S+G GFV F T EASRAL
Sbjct: 423 QPSNLYVRNLAPSIDDSILHSSFAPFGIIVSAKIMTTDEGESRGYGFVCFRTSPEASRAL 482
Query: 370 AEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGP--SGL 427
M+G ++ + L+V+ AQ+ ++R G ++P++P G +GL
Sbjct: 483 IAMHGNVLHGQMLHVSFAQKNNKKR--------------FGKQQQQQIPIHPNGSYYNGL 528
Query: 428 GQ-------QFLYGQAPPAIIPPQMPPRGHAYRY------PLGRNMQDFPFDMGAG 470
Q Q+ QA + PP G+ YR P ++ Q +D G G
Sbjct: 529 YQNPNQPPYQYYNTQAGQPVPPPSGNGYGNGYRSYYNGYKPFKQHQQ---YDQGTG 581
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 89/180 (49%), Gaps = 14/180 (7%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
++YV L +T L+ +F G++ S ++ D RS GYG++NY++ + A A+
Sbjct: 130 NIYVRGLGPEITTEDLFKIFEPFGEITSSKIVND-EFGRSKGYGFINYSDGSSADDAISK 188
Query: 91 LNFTPLNNKSI----RIMYSHRDPSI--RKSGTGNIFIKNL--DKSIDHKALHDTFSSFG 142
LN +N + I R I KS N++IKNL D +ID F+ FG
Sbjct: 189 LNGLLVNGSKLYLNHHIAKKERIQRIDFEKSNFTNLYIKNLPIDYTIDQ--FESLFAKFG 246
Query: 143 NILSCKIA--TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVF-VGHFLRKQER 199
I S + DG SK FGF+ F+N ESA +AI+ LN I+ Q V R+ ER
Sbjct: 247 EISSSFLPDLNDGDQTSKRFGFINFKNHESAISAIESLNNFEISPNQFLSVSRAQRRDER 306
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKL 178
N++++NL SID LH +F+ FG I+S KI T G+S+G+GFV F A A+ +
Sbjct: 426 NLYVRNLAPSIDDSILHSSFAPFGIIVSAKIMTTDEGESRGYGFVCFRTSPEASRALIAM 485
Query: 179 NGMLINDKQVFVGHFLRKQERE 200
+G +++ + + V F +K ++
Sbjct: 486 HGNVLHGQMLHVS-FAQKNNKK 506
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 48/81 (59%)
Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEAL 269
N++V+NL S D L F +G I SA +M +G+S+ +GFV F + +A++A+ A+
Sbjct: 426 NLYVRNLAPSIDDSILHSSFAPFGIIVSAKIMTTDEGESRGYGFVCFRTSPEASRALIAM 485
Query: 270 NGKKFDDREWYVGKAQKKSER 290
+G + +V AQK +++
Sbjct: 486 HGNVLHGQMLHVSFAQKNNKK 506
>gi|348510833|ref|XP_003442949.1| PREDICTED: ELAV-like protein 1-like [Oreochromis niloticus]
Length = 341
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 143/296 (48%), Gaps = 50/296 (16%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
T+L V L N+T +L LFS +G+V S ++ RD SLGYG+VNY NP+DA RA+
Sbjct: 35 TNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYLNPSDAERAIS 94
Query: 90 VLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKI 149
LN L +K+I++ Y+ PS N++I L K++ K + D FS +G I++ ++
Sbjct: 95 TLNGLRLQSKTIKVSYAR--PSSDTIKDANLYISGLPKNMTQKDVEDMFSRYGRIINSRV 152
Query: 150 ATD-GSGQSKGFGFVQFENKESAQNAIDKLNG-------------MLINDKQV----FVG 191
D G+G S+G F++F+ + A+ A+ LNG N QV +
Sbjct: 153 LVDQGTGSSRGVAFIRFDKRAEAEEAVKNLNGQKPPGASEPITVKFAANPNQVKNTQLLS 212
Query: 192 HFLRKQER------ETVAIKTKFNNVFVKN-----------------------LDESTTD 222
Q R A + +F+ + V + L + +
Sbjct: 213 QLYHNQSRRFGGPLHHQAQRFRFSPMGVDHMGSMGGVSVPGNSTSGWCIFIYNLGQDADE 272
Query: 223 EDLKKIFGEYGTITSAVVMRD-GDGKSKCFGFVNFENADDAAKAVEALNGKKFDDR 277
L ++FG +G +T+ V+RD K K FGFV N ++AA A+ +LNG + D+
Sbjct: 273 SILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDK 328
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 145/317 (45%), Gaps = 43/317 (13%)
Query: 114 KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQ 172
K N+ + L +++ L FSS G + S K+ D +G S G+GFV + N A+
Sbjct: 31 KDAKTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYLNPSDAE 90
Query: 173 NAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEY 232
AI LNG+ + K + V + + +T+ K N+++ L ++ T +D++ +F Y
Sbjct: 91 RAISTLNGLRLQSKTIKVSY--ARPSSDTI----KDANLYISGLPKNMTQKDVEDMFSRY 144
Query: 233 GTITSAVVMRD-GDGKSKCFGFVNFENADDAAKAVEALNGK-----------KFDDREWY 280
G I ++ V+ D G G S+ F+ F+ +A +AV+ LNG+ KF
Sbjct: 145 GRIINSRVLVDQGTGSSRGVAFIRFDKRAEAEEAVKNLNGQKPPGASEPITVKFAANPNQ 204
Query: 281 VGKAQKKSEREQELKGQFEQAMKETVDKFQ-----------------------GLNLYIK 317
V Q S+ +F + +F+ G ++I
Sbjct: 205 VKNTQLLSQLYHNQSRRFGGPLHHQAQRFRFSPMGVDHMGSMGGVSVPGNSTSGWCIFIY 264
Query: 318 NLGDSIDDEKLKELFSEFGTITSCKVMRD-PSGISKGSGFVAFSTPEEASRALAEMNGKM 376
NLG D+ L ++F FG +T+ KV+RD + KG GFV + EEA+ A+A +NG
Sbjct: 265 NLGQDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYR 324
Query: 377 IVSKPLYVAVAQRKEER 393
+ K L V+ K +
Sbjct: 325 LGDKILQVSFKTSKGHK 341
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
Query: 293 ELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP-SGIS 351
++ +E M K NL + L ++ ++L+ LFS G + S K++RD +G S
Sbjct: 16 DMSNGYEDHMGGDEGKDAKTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHS 75
Query: 352 KGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
G GFV + P +A RA++ +NG + SK + V+ A+
Sbjct: 76 LGYGFVNYLNPSDAERAISTLNGLRLQSKTIKVSYAR 112
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 5/100 (5%)
Query: 6 VQHQAQMSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDL 65
V H M G GN +++ +L + +S L+ +F G V +V+V RD
Sbjct: 240 VDHMGSMGG-----VSVPGNSTSGWCIFIYNLGQDADESILWQMFGPFGAVTNVKVIRDF 294
Query: 66 STRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMY 105
+T + G+G+V N +AA A+ LN L +K +++ +
Sbjct: 295 NTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKILQVSF 334
>gi|403355493|gb|EJY77324.1| Polyadenylate-binding protein, cytoplasmic and nuclear [Oxytricha
trifallax]
Length = 590
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 133/515 (25%), Positives = 221/515 (42%), Gaps = 90/515 (17%)
Query: 118 GNIFIKNLDKSIDHKALHDTFSS-FGN--ILSCKIATDGSGQSKGFGFVQFENKESAQNA 174
N+ ++NLDKSI + L + F+ FG+ +LS K++ + S+G+GFV F + A+ A
Sbjct: 101 NNLKVQNLDKSITSQQLDEIFAKVFGDDAVLSAKVSINSDYSSRGYGFVLFACPQLAEQA 160
Query: 175 IDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGT 234
+ K + F Q ++ ++ FNN+++ N + E +++IFG+YGT
Sbjct: 161 LAKASE--------FNFEISPHQPKDRRELRKTFNNIYINNFPSNWNKEKIEQIFGQYGT 212
Query: 235 ITSAVVMR---DGDGKSKCFGFVNFENADD-------AAKAVEALNGKKFDDREWYVGKA 284
I S V+ G + F FV +E+ D+ A A+ N K++D + YV +A
Sbjct: 213 IKSTVIKMGKVQGTDQEAPFAFVCYEDKDNKEYGPKCALNAINQENDKEYDGIKLYVKEA 272
Query: 285 QKKSEREQELK---GQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSC 341
K+ REQE K +F+ + K NLY+KN ++ +E+LK F ++G I S
Sbjct: 273 LPKTLREQEKKREQNRFKNSKKRC-------NLYVKNFPENTTEEQLKAYFEKYGEIESI 325
Query: 342 KVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERR-----AR 396
K+ FV + PE A+ A + + + K L++ ++KE R+ AR
Sbjct: 326 KLNHKEGAAV--YAFVCYKNPESATYAKQQSQTQTLNGKQLFLNFYEQKEVRKIQQEDAR 383
Query: 397 LQAQFSQMRPVAMGPSVPPRMPMYPPG-------------------------------PS 425
+ F +R + ++ M P
Sbjct: 384 DRTDFQNLRKQSPTSALNIDMLNRPETFQLLQYLMITIQRQQQNQRYNNPQRQGGNMQQR 443
Query: 426 GLGQQFL----YGQAPPAIIPPQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPV----PV 477
G QQ+ Y Q + QMPP R P P M + M + P
Sbjct: 444 GPRQQYNNQGGYQQRNQQLPQGQMPPMNQQMRQPQQ------PVIMPSQVMPALAQVAPS 497
Query: 478 DMGAGIPRRDASVGQPMPITALSTA--LANASPEQQRTLLGESLYPLVEQLE-RDAAAKV 534
M +P + Q +S L +A ++ +GE +Y VE+L D A K+
Sbjct: 498 AMNQNLPPHILTYNQ----NGMSKIFPLVSALNPNYKSQVGEFIYEHVEELAGEDLAPKI 553
Query: 535 TGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRS 569
TGML+++ E+ + LK K+ EA +L+S
Sbjct: 554 TGMLIDLPIVEIQAYVTDFMKLKIKINEASTLLKS 588
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 136/278 (48%), Gaps = 47/278 (16%)
Query: 30 TSLYVGDLDFNVTDSQLYDLFSQV---GQVLSVRVC--RDLSTRRSLGYGYVNYANPADA 84
+L V +LD ++T QL ++F++V VLS +V D S+R GYG+V +A P A
Sbjct: 101 NNLKVQNLDKSITSQQLDEIFAKVFGDDAVLSAKVSINSDYSSR---GYGFVLFACPQLA 157
Query: 85 ARAL---DVLNF--TPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFS 139
+AL NF +P K R +RK+ NI+I N + + + + F
Sbjct: 158 EQALAKASEFNFEISPHQPKDRR--------ELRKT-FNNIYINNFPSNWNKEKIEQIFG 208
Query: 140 SFGNILSCKI---ATDGSGQSKGFGFVQFENKES-------AQNAIDKLNGMLINDKQVF 189
+G I S I G+ Q F FV +E+K++ A NAI++ N + +++
Sbjct: 209 QYGTIKSTVIKMGKVQGTDQEAPFAFVCYEDKDNKEYGPKCALNAINQENDKEYDGIKLY 268
Query: 190 VGH----FLRKQE--RETVAIKT--KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVM 241
V LR+QE RE K K N++VKN E+TT+E LK F +YG I S + +
Sbjct: 269 VKEALPKTLREQEKKREQNRFKNSKKRCNLYVKNFPENTTEEQLKAYFEKYGEIES-IKL 327
Query: 242 RDGDGKSKCFGFVNFENADDAAKA-----VEALNGKKF 274
+G + + FV ++N + A A + LNGK+
Sbjct: 328 NHKEG-AAVYAFVCYKNPESATYAKQQSQTQTLNGKQL 364
>gi|196013113|ref|XP_002116418.1| hypothetical protein TRIADDRAFT_30761 [Trichoplax adhaerens]
gi|190581009|gb|EDV21088.1| hypothetical protein TRIADDRAFT_30761, partial [Trichoplax
adhaerens]
Length = 102
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 61/98 (62%), Positives = 79/98 (80%)
Query: 306 VDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEA 365
+++ QG NLY+KNL D+IDD +LKE FS+FG+ITS KVM D G SKG GFV F+T EEA
Sbjct: 1 MNRTQGANLYVKNLDDAIDDARLKEEFSKFGSITSAKVMCDEKGASKGFGFVCFATQEEA 60
Query: 366 SRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQ 403
S+A+ EM+G++IVSKPLYV AQRKEER+A L +Q++
Sbjct: 61 SKAINEMSGRIIVSKPLYVTFAQRKEERKAFLASQYNH 98
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 54/83 (65%)
Query: 118 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDK 177
N+++KNLD +ID L + FS FG+I S K+ D G SKGFGFV F +E A AI++
Sbjct: 7 ANLYVKNLDDAIDDARLKEEFSKFGSITSAKVMCDEKGASKGFGFVCFATQEEASKAINE 66
Query: 178 LNGMLINDKQVFVGHFLRKQERE 200
++G +I K ++V RK+ER+
Sbjct: 67 MSGRIIVSKPLYVTFAQRKEERK 89
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 61/94 (64%)
Query: 205 KTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAK 264
+T+ N++VKNLD++ D LK+ F ++G+ITSA VM D G SK FGFV F ++A+K
Sbjct: 3 RTQGANLYVKNLDDAIDDARLKEEFSKFGSITSAKVMCDEKGASKGFGFVCFATQEEASK 62
Query: 265 AVEALNGKKFDDREWYVGKAQKKSEREQELKGQF 298
A+ ++G+ + YV AQ+K ER+ L Q+
Sbjct: 63 AINEMSGRIIVSKPLYVTFAQRKEERKAFLASQY 96
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
+LYV +LD + D++L + FS+ G + S +V D S G+G+V +A +A++A++
Sbjct: 8 NLYVKNLDDAIDDARLKEEFSKFGSITSAKVMCD-EKGASKGFGFVCFATQEEASKAINE 66
Query: 91 LNFTPLNNKSIRIMYSHR 108
++ + +K + + ++ R
Sbjct: 67 MSGRIIVSKPLYVTFAQR 84
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.132 0.374
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,208,676,573
Number of Sequences: 23463169
Number of extensions: 413123663
Number of successful extensions: 1589490
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 17098
Number of HSP's successfully gapped in prelim test: 11678
Number of HSP's that attempted gapping in prelim test: 1397921
Number of HSP's gapped (non-prelim): 121769
length of query: 593
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 445
effective length of database: 8,886,646,355
effective search space: 3954557627975
effective search space used: 3954557627975
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 80 (35.4 bits)