BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 007673
         (593 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|P42731|PABP2_ARATH Polyadenylate-binding protein 2 OS=Arabidopsis thaliana GN=PAB2
           PE=1 SV=1
          Length = 629

 Score =  809 bits (2089), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 415/647 (64%), Positives = 487/647 (75%), Gaps = 77/647 (11%)

Query: 1   MAQIQVQHQAQMSGPNGVAA----------GASGNQFLTTSLYVGDLDFNVTDSQLYDLF 50
           MAQ+Q+Q Q     PNG  A          GA+  QF  TSLYVGDLDFNVTDSQL+D F
Sbjct: 1   MAQVQLQGQT----PNGSTAAVTSAPATSGGATATQFGNTSLYVGDLDFNVTDSQLFDAF 56

Query: 51  SQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDP 110
            Q+G V++VRVCRDL TRRSLGYGYVN+ NP DAARA+  LN+ PL  K IR+MYSHRDP
Sbjct: 57  GQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARAIQELNYIPLYGKPIRVMYSHRDP 116

Query: 111 SIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKES 170
           S+R+SG GNIFIKNLD+SIDHKALHDTFSSFGNI+SCK+A D SGQSKG+GFVQ+ N+ES
Sbjct: 117 SVRRSGAGNIFIKNLDESIDHKALHDTFSSFGNIVSCKVAVDSSGQSKGYGFVQYANEES 176

Query: 171 AQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFG 230
           AQ AI+KLNGML+NDKQV+VG FLR+QER++ A KTKF NV+VKNL ESTTD+DLK  FG
Sbjct: 177 AQKAIEKLNGMLLNDKQVYVGPFLRRQERDSTANKTKFTNVYVKNLAESTTDDDLKNAFG 236

Query: 231 EYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSER 290
           EYG ITSAVVM+DG+GKSK FGFVNFENADDAA+AVE+LNG KFDD+EWYVG+AQKKSER
Sbjct: 237 EYGKITSAVVMKDGEGKSKGFGFVNFENADDAARAVESLNGHKFDDKEWYVGRAQKKSER 296

Query: 291 EQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGI 350
           E EL+ ++EQ +KE  DKFQ  NLY+KNL  SI DEKLKE+FS FGT+TS KVMRDP+G 
Sbjct: 297 ETELRVRYEQNLKEAADKFQSSNLYVKNLDPSISDEKLKEIFSPFGTVTSSKVMRDPNGT 356

Query: 351 SKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMG 410
           SKGSGFVAF+TPEEA+ A+++++GKMI SKPLYVA+AQRKE+RR RLQAQFSQ+RPVAM 
Sbjct: 357 SKGSGFVAFATPEEATEAMSQLSGKMIESKPLYVAIAQRKEDRRVRLQAQFSQVRPVAMQ 416

Query: 411 PSVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPPQ------------MPPRG--------- 449
           PSV PRMP+YPPG  G+GQQ  YGQAPPA+IPPQ            M P G         
Sbjct: 417 PSVGPRMPVYPPGGPGIGQQMFYGQAPPAMIPPQPGYGYQQQLVPGMRPGGGPVPSFFMP 476

Query: 450 -------------------HA---------YRYPLGRNMQDFPFDMGAGSMLPVPVDMGA 481
                              H+           +P GR M  +P   G    +P P DMG 
Sbjct: 477 MVQPQQQRPGGGRRPGGIQHSQQQNPMMQQQMHPRGR-MFRYPQGRGGSGDVP-PYDMGN 534

Query: 482 GIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEM 541
            +         P+ I AL++ L+NA+PEQQRT+LGE LYPLVEQ+E ++AAKVTGMLLEM
Sbjct: 535 NM---------PLTIGALASNLSNATPEQQRTMLGEVLYPLVEQVEAESAAKVTGMLLEM 585

Query: 542 DQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNPADQLASLSLN 588
           DQTEVLHLLESPEALKAKVAEAM+VLRSVA   A    +QLASL+L+
Sbjct: 586 DQTEVLHLLESPEALKAKVAEAMDVLRSVA---AGGATEQLASLNLS 629


>sp|Q05196|PABP5_ARATH Polyadenylate-binding protein 5 OS=Arabidopsis thaliana GN=PAB5
           PE=1 SV=3
          Length = 682

 Score =  580 bits (1494), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 327/634 (51%), Positives = 418/634 (65%), Gaps = 82/634 (12%)

Query: 29  TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
            +SLYVGDLD +V +S L DLF+QV  V ++RVCRDL T RSLGY YVN+ANP DA+RA+
Sbjct: 58  NSSLYVGDLDPSVNESHLLDLFNQVAPVHNLRVCRDL-THRSLGYAYVNFANPEDASRAM 116

Query: 89  DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
           + LN+ P+ ++ IRIM S+RDPS R SG GN+FIKNLD SID+KAL++TFSSFG ILSCK
Sbjct: 117 ESLNYAPIRDRPIRIMLSNRDPSTRLSGKGNVFIKNLDASIDNKALYETFSSFGTILSCK 176

Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER---ETVAIK 205
           +A D  G+SKG+GFVQFE +E+AQ AIDKLNGML+NDKQVFVGHF+R+Q+R   E+ A+ 
Sbjct: 177 VAMDVVGRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQVFVGHFVRRQDRARSESGAVP 236

Query: 206 TKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKA 265
           + F NV+VKNL +  TD++LKK FG+YG I+SAVVM+D  G S+ FGFVNF + + AA A
Sbjct: 237 S-FTNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGNSRSFGFVNFVSPEAAAVA 295

Query: 266 VEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDD 325
           VE +NG    +   YVG+AQKKS+RE+EL+ +FEQ      +K QG NLY+KNL DS++D
Sbjct: 296 VEKMNGISLGEDVLYVGRAQKKSDREEELRRKFEQERISRFEKLQGSNLYLKNLDDSVND 355

Query: 326 EKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVA 385
           EKLKE+FSE+G +TSCKVM +  G+S+G GFVA+S PEEA  A+ EMNGKMI  KPLYVA
Sbjct: 356 EKLKEMFSEYGNVTSCKVMMNSQGLSRGFGFVAYSNPEEALLAMKEMNGKMIGRKPLYVA 415

Query: 386 VAQRKEERRARLQAQFSQMR--------PVAM---------GPSVPPRMPMY-------- 420
           +AQRKEER+A LQ+ F+Q+R        P  M         GP   P  PM+        
Sbjct: 416 LAQRKEERQAHLQSLFTQIRSPGTMSPVPSPMSGFHHHPPGGPMSGPHHPMFIGHNGQGL 475

Query: 421 -PPGPSGLGQQ--FLYGQAPPAIIPPQMPPRGHAYRYPLGRNMQDFP------------- 464
            P  P G G Q  F+ G  P A  P  M P      +PL R  Q  P             
Sbjct: 476 VPSQPMGYGYQVQFMPGMRPGAGPPNFMMP------FPLQRQTQPGPRVGFRRGANNMQQ 529

Query: 465 --------------FDMGAGS------------MLPVPVDMGAG---IPRRDASVGQPMP 495
                         F  GAG+            ++P+P++  A     P+R +    P+ 
Sbjct: 530 QFQQQQMLQQNASRFMGGAGNRRNGMEASAPQGIIPLPLNASANSHNAPQR-SHKPTPLT 588

Query: 496 ITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEA 555
           I+ L++ LA ASP++   +LG+ LYPLVEQ E   AAKVTGMLLEMDQ E+LHLLESPEA
Sbjct: 589 ISKLASDLALASPDKHPRMLGDHLYPLVEQQEPANAAKVTGMLLEMDQAEILHLLESPEA 648

Query: 556 LKAKVAEAMEVLRSVAQQQANNPADQLASLSLNE 589
           LKAKV+EA++VLR  A   A +  D   +LS +E
Sbjct: 649 LKAKVSEALDVLRRSADPAAVSSVDDQFALSSSE 682


>sp|O64380|PABP3_ARATH Polyadenylate-binding protein 3 OS=Arabidopsis thaliana GN=PAB3
           PE=2 SV=1
          Length = 660

 Score =  574 bits (1479), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 319/602 (52%), Positives = 399/602 (66%), Gaps = 69/602 (11%)

Query: 30  TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
           +SLY GDLD  VT++ L+DLF  V  V+SVRVCRD   RRSLGY Y+N++NP DA RA++
Sbjct: 49  SSLYAGDLDPKVTEAHLFDLFKHVANVVSVRVCRD-QNRRSLGYAYINFSNPNDAYRAME 107

Query: 90  VLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKI 149
            LN+TPL ++ IRIM S+RDPS R SG GNIFIKNLD SID+KAL +TFSSFG ILSCK+
Sbjct: 108 ALNYTPLFDRPIRIMLSNRDPSTRLSGKGNIFIKNLDASIDNKALFETFSSFGTILSCKV 167

Query: 150 ATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER--ETVAIKTK 207
           A D +G+SKG+GFVQFE +ESAQ AIDKLNGML+NDKQVFVGHF+R+QER  +      +
Sbjct: 168 AMDVTGRSKGYGFVQFEKEESAQAAIDKLNGMLMNDKQVFVGHFIRRQERARDENTPTPR 227

Query: 208 FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVE 267
           F NV+VKNL +   +++L+K FG++G I+SAVVMRD  G S+CFGFVNFE  + AA AVE
Sbjct: 228 FTNVYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQSGNSRCFGFVNFECTEAAASAVE 287

Query: 268 ALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEK 327
            +NG    D   YVG+AQKKSERE+EL+ +FEQ      +K QG NLY+KNL DS+DDEK
Sbjct: 288 KMNGISLGDDVLYVGRAQKKSEREEELRRKFEQERINRFEKSQGANLYLKNLDDSVDDEK 347

Query: 328 LKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 387
           LKE+FSE+G +TS KVM +P G+S+G GFVA+S PEEA RAL+EMNGKMI  KPLY+A+A
Sbjct: 348 LKEMFSEYGNVTSSKVMLNPQGMSRGFGFVAYSNPEEALRALSEMNGKMIGRKPLYIALA 407

Query: 388 QRKEERRARLQAQFSQMRPVAMGP-----------SVPPRMPMY---------PPGPSGL 427
           QRKE+RRA LQA FSQ+R  A GP              P   MY         P  P G 
Sbjct: 408 QRKEDRRAHLQALFSQIR--APGPMSGFHHPPGGPMPGPPQHMYVGQNGASMVPSQPIGY 465

Query: 428 G--QQFLYGQAPPA-----IIP------PQMPPR-----------------GHAYRYPL- 456
           G   QF+ G  P +     I+P      PQ  PR                    +R P  
Sbjct: 466 GFQPQFMPGMRPGSGPGNFIVPYPLQRQPQTGPRMGFRRGATNVQQHIQQQQLMHRNPSP 525

Query: 457 ----------GRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALSTALANA 506
                     GRN  D     G    +       + I  + A +   +PI+ L+++LA+A
Sbjct: 526 GMRYMNGASNGRNGMDSSVPQGILPPIIPLPIDASSISHQKAPL---LPISKLTSSLASA 582

Query: 507 SPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEV 566
           SP  +  +LGE LYPLVE+ E    AKVTGMLLEMDQ E+LHL+ESPEALK+KV+EA++V
Sbjct: 583 SPADRTRMLGEQLYPLVERHEPLHVAKVTGMLLEMDQAEILHLMESPEALKSKVSEALDV 642

Query: 567 LR 568
           LR
Sbjct: 643 LR 644


>sp|Q6DEY7|EPAB_XENTR Embryonic polyadenylate-binding protein OS=Xenopus tropicalis
           GN=epabp PE=2 SV=1
          Length = 629

 Score =  509 bits (1310), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 281/634 (44%), Positives = 395/634 (62%), Gaps = 76/634 (11%)

Query: 22  ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
           A+G  +   SLYVGDL  +VT++ LY+ FS  G ++S+RVCRD++TRRSLGY Y+N+  P
Sbjct: 3   ATGAGYPLASLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQP 62

Query: 82  ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
           ADA RALD +NF  +  + IRIM+S RDP +RKSG GN+FIKNLD+SID+KAL+DTFS+F
Sbjct: 63  ADAERALDTMNFEVIKGRPIRIMWSQRDPGLRKSGVGNVFIKNLDESIDNKALYDTFSAF 122

Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
           GNILSCK+  D  G S+G+GFV FE +E+A  AI  +NGML+ND++VFVGHF  ++ERE 
Sbjct: 123 GNILSCKVVCDEHG-SRGYGFVHFETQEAANRAIQTMNGMLLNDRKVFVGHFKSRREREL 181

Query: 202 V--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
              A   +F NV++KN  E   D+ L++IF  +G   S  VM D  G+S+ FGFVN+ N 
Sbjct: 182 EYGAKVMEFTNVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDDTGRSRGFGFVNYGNH 241

Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
           ++A KAV  +NGK+ + R  YVG+AQK+ ER+ ELK +FEQ  +E ++++QG+NLY+KNL
Sbjct: 242 EEAQKAVSEMNGKEVNGRMIYVGRAQKRIERQGELKRKFEQIKQERINRYQGVNLYVKNL 301

Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
            D IDD++L++ FS +GTITS KVM +  G SKG GFV FS+PEEA++A+ EMNG+++ +
Sbjct: 302 DDGIDDDRLRKEFSPYGTITSAKVMTE-GGHSKGFGFVCFSSPEEATKAVTEMNGRIVST 360

Query: 380 KPLYVAVAQRKEERRARLQAQFSQ----MRPVAMGPSV----------------PPRMPM 419
           KPLYVA+AQRKEER+A L  Q+ Q    MR +  GP +                PP    
Sbjct: 361 KPLYVALAQRKEERKAILTNQYMQRLATMRAMP-GPLLGSFQQPANYFLPAMPQPPNRTF 419

Query: 420 YPPGPSG---LGQQFLYGQA-PPAIIPP-----QMPPRG--------------------H 450
           Y P P        Q+   Q+ PP   PP      +PPR                     H
Sbjct: 420 YSPNPVAPVRQAPQWTSHQSRPPQYQPPAPLMRAVPPRRMSSNISTMKQASTQVPRVAPH 479

Query: 451 AYRYP----------------LGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPM 494
           + R                  + R M  + +     ++ P+  +         A + Q  
Sbjct: 480 SQRVANIGTQTAGARAQVNPSIMRTMPHYKYSCAVRNVQPIGTNTHLQQVMEPAVLMQGQ 539

Query: 495 -PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESP 553
            P+TA  ++LA+A P++Q+ +LGE LYPL+ ++    A K+TGMLLE+D +E+LH+LESP
Sbjct: 540 EPLTA--SSLASAPPQEQKQMLGERLYPLIHEMHPTLAGKITGMLLEIDNSELLHMLESP 597

Query: 554 EALKAKVAEAMEVLRSVAQQQANNPADQLASLSL 587
           E+L +KV EA+ VL++    QA   + + A  SL
Sbjct: 598 ESLHSKVEEAVAVLQA---HQAKENSQKSAQQSL 628


>sp|Q5B630|PABP_EMENI Polyadenylate-binding protein, cytoplasmic and nuclear
           OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 /
           CBS 112.46 / NRRL 194 / M139) GN=pab1 PE=2 SV=2
          Length = 732

 Score =  506 bits (1304), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 293/698 (41%), Positives = 393/698 (56%), Gaps = 149/698 (21%)

Query: 18  VAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVN 77
           V A A+ +Q  + SLYVG+LD +VT++ LY+LFS +GQV S+RVCRD  TRRSLGY YVN
Sbjct: 30  VEAPATTSQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVN 89

Query: 78  YANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDT 137
           Y + A   RALD LN+T +  K  RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDT
Sbjct: 90  YNDTAHGERALDELNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDT 149

Query: 138 FSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQ 197
           F++FGNILSCK+A D  G SKG+GFV +E  E+A NAI  +NGML+NDK+VFVGH + K+
Sbjct: 150 FAAFGNILSCKVAQDEFGVSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKK 209

Query: 198 ERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVN 255
           +R++    +K  F N+++KN+D    DE+ +K+F ++G ITSA + RD +GKS+ FGFVN
Sbjct: 210 DRQSKFEEMKANFTNIYIKNIDPEVEDEEFRKLFEKFGEITSATLSRDSEGKSRGFGFVN 269

Query: 256 FENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLY 315
           F   + A  AVE +N K+   ++ YVG+AQKK ERE+EL+ Q+E A  E   K+QG+NLY
Sbjct: 270 FSTHESAQAAVEEMNDKEVRSQKLYVGRAQKKHEREEELRKQYEAARMEKASKYQGVNLY 329

Query: 316 IKNLGDSIDDEKLKELFSEFGTITSCKVMRD----------------------------- 346
           +KNL D +DD+KL+ELF  +GTITS KVMRD                             
Sbjct: 330 VKNLTDDVDDDKLRELFGPYGTITSAKVMRDTAPVETATPESETKESANKENEKAAEGEK 389

Query: 347 ----------------------PSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYV 384
                                 P G SKG GFV FS+P+EAS+A+ EMN +M+  KPLYV
Sbjct: 390 EPAAEEKEKEEKKEAEQKPEKKPLGKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKPLYV 449

Query: 385 AVAQRKEERRARLQAQFSQMRPVA--------------MGPSVPPRMPMYPPGPSGLGQQ 430
           A+AQRK+ RR++L+A       +               M P+V      Y PG  G    
Sbjct: 450 ALAQRKDVRRSQLEASIQARNNIRQQQAAAAAGMGQAYMAPAV-----FYGPGQQG---- 500

Query: 431 FLYGQAPPAIIPPQ------MPPRGHAYRYP---------LGRNMQDFPFDMGAGSMLPV 475
           F+ G     + PPQ      MP R   Y  P         +G N Q  P   G    LP+
Sbjct: 501 FIPGAQRGGMFPPQPGMMMGMPGRPGQYPGPFPGQQGGRGVGPNQQIPPNFQG----LPM 556

Query: 476 PVDMGAGIPR-------------------------------------------------- 485
               G GIP                                                   
Sbjct: 557 GAMQGPGIPNGMGYPMVQGQFGGGRGRGQVPGMGGPMRGGYGGGRGGVPLGGQMRPGQGG 616

Query: 486 RDASVGQPMPITAL----STALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEM 541
           R  +VGQP P T +    + AL+ A P+QQ+ +LGE+LYP ++  + + A K+TGMLLEM
Sbjct: 617 RGQAVGQPGPETPVGVLTAQALSAAPPQQQKQMLGEALYPKIQATQPELAGKITGMLLEM 676

Query: 542 DQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNPA 579
           D TE+L LLE  EAL+AKV EA+ V     + +++ PA
Sbjct: 677 DNTELLGLLEDDEALRAKVDEALSVYDEYMKNKSDEPA 714



 Score =  181 bits (458), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 105/318 (33%), Positives = 169/318 (53%), Gaps = 21/318 (6%)

Query: 92  NFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIAT 151
           N TP N  +  +       +  +  + ++++  LD S+    L++ FSS G + S ++  
Sbjct: 16  NGTPDNAPAPEVTAVEAPATTSQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCR 75

Query: 152 DG-SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNN 210
           D  + +S G+ +V + +    + A+D+LN  LI  K   +       +R+    KT   N
Sbjct: 76  DAVTRRSLGYAYVNYNDTAHGERALDELNYTLIKGKPCRI----MWSQRDPALRKTGQGN 131

Query: 211 VFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALN 270
           VF+KNLD +  ++ L   F  +G I S  V +D  G SK +GFV++E A+ A  A++ +N
Sbjct: 132 VFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGVSKGYGFVHYETAEAANNAIKHVN 191

Query: 271 GKKFDDREWYVGKAQKKSERE---QELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEK 327
           G   +D++ +VG    K +R+   +E+K  F              N+YIKN+   ++DE+
Sbjct: 192 GMLLNDKKVFVGHHISKKDRQSKFEEMKANF-------------TNIYIKNIDPEVEDEE 238

Query: 328 LKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 387
            ++LF +FG ITS  + RD  G S+G GFV FST E A  A+ EMN K + S+ LYV  A
Sbjct: 239 FRKLFEKFGEITSATLSRDSEGKSRGFGFVNFSTHESAQAAVEEMNDKEVRSQKLYVGRA 298

Query: 388 QRKEERRARLQAQFSQMR 405
           Q+K ER   L+ Q+   R
Sbjct: 299 QKKHEREEELRKQYEAAR 316


>sp|Q4VXU2|PAP1L_HUMAN Polyadenylate-binding protein 1-like OS=Homo sapiens GN=PABPC1L
           PE=2 SV=1
          Length = 614

 Score =  503 bits (1295), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 279/604 (46%), Positives = 377/604 (62%), Gaps = 60/604 (9%)

Query: 22  ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
           ASG+ +   SLYVGDL  +VT++ LY+ FS  G +LS+RVCRD++TRRSLGY Y+N+  P
Sbjct: 3   ASGSGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQP 62

Query: 82  ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
           ADA RALD +NF  L  + IRIM+S RDP +RKSG GNIFIKNL+ SID+KAL+DTFS+F
Sbjct: 63  ADAERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTF 122

Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
           GNILSCK+A D  G S+GFGFV FE  E+AQ AI+ +NGML+ND++VFVGHF  ++ERE 
Sbjct: 123 GNILSCKVACDEHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRREREA 181

Query: 202 V--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
              A   +F N++VKNL     ++ L+ +F ++G + S  VMRD  G S+CFGFVNFE  
Sbjct: 182 ELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKH 241

Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
           ++A KAV  +NGK+   R  Y G+AQK+ ER+ ELK +FEQ  ++ + ++QG+NLY+KNL
Sbjct: 242 EEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNL 301

Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
            DSIDD+KL++ FS +G ITS KVM +  G SKG GFV FS+PEEA++A+ EMNG+++ +
Sbjct: 302 DDSIDDDKLRKEFSPYGVITSAKVMTE-GGHSKGFGFVCFSSPEEATKAVTEMNGRIVGT 360

Query: 380 KPLYVAVAQRKEERRARLQAQFSQ----MRPVA---MGPSVPPRMPMYPPGPSGLGQQFL 432
           KPLYVA+AQRKEER+A L  Q+ Q    MR ++   +G    P     P  P    Q   
Sbjct: 361 KPLYVALAQRKEERKAILTNQYMQRLSTMRTLSNPLLGSFQQPSSYFLPAMPQPPAQAAY 420

Query: 433 YGQAP-----PAIIPPQMPPRG----------------------------------HAYR 453
           YG  P     PA      PPR                                   H  R
Sbjct: 421 YGCGPVTPTQPAPRWTSQPPRPSCASMVRPPVVPRRPPAHISSVRQASTQVPRTVPHTQR 480

Query: 454 YPLGRNMQDFPFDMGAGS----MLPVPVDMGAGIPRR--DASVGQP--MPITALSTALAN 505
                     P  +G  +    +LP      A    R  + +V  P   P+TA  + LA 
Sbjct: 481 VANIGTQTTGPSGVGCCTPGRPLLPCKCSSAAHSTYRVQEPAVHIPGQEPLTA--SMLAA 538

Query: 506 ASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAME 565
           A   +Q+ ++GE LYPL+  +    A K+TGMLLE+D +E+L +LESPE+L AK+ EA+ 
Sbjct: 539 APLHEQKQMIGERLYPLIHDVHTQLAGKITGMLLEIDNSELLLMLESPESLHAKIDEAVA 598

Query: 566 VLRS 569
           VL++
Sbjct: 599 VLQA 602


>sp|Q1DXH0|PABP_COCIM Polyadenylate-binding protein, cytoplasmic and nuclear
           OS=Coccidioides immitis (strain RS) GN=PAB1 PE=3 SV=1
          Length = 768

 Score =  499 bits (1285), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 298/681 (43%), Positives = 388/681 (56%), Gaps = 144/681 (21%)

Query: 29  TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
           + SLYVG+LD +VT++ L++LFS +GQV S+RVCRD  TRRSLGY YVNY N AD  RAL
Sbjct: 54  SASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERAL 113

Query: 89  DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
           + LN+T +  +  RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++FGNILSCK
Sbjct: 114 EDLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILSCK 173

Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKT 206
           +A D  G SKG+GFV +E  E+AQNAI  +NGML+NDK+VFVGH + K++R++    +K 
Sbjct: 174 VAQDEFGNSKGYGFVHYETAEAAQNAIKHVNGMLLNDKKVFVGHHIAKKDRQSKFEEMKA 233

Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGD-GKSKCFGFVNFENADDAAKA 265
            F NV+VKN+D+ TT+E+ + +F ++G ITSA + RD + GKS+ FGFVNF + D+AA A
Sbjct: 234 NFTNVYVKNIDQDTTEEEFRDLFEKFGEITSATLARDAESGKSRGFGFVNFTSHDNAAAA 293

Query: 266 VEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDD 325
           VEALN K F  ++ YVG+AQKK ERE+EL+ Q+E A  E   K+QG+NLYIKNL D IDD
Sbjct: 294 VEALNDKDFKGQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQGVNLYIKNLSDDIDD 353

Query: 326 EKLKELFSEFGTITSCKVMRD--------------------------------------- 346
           EKL+ELFS +GTITS KVMRD                                       
Sbjct: 354 EKLRELFSSYGTITSAKVMRDFAPESTSDSEKEAKKDSKEPETKEEEPKDEAGDNAENKD 413

Query: 347 --------------PSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEE 392
                         P G SKG GFV FS+P+EAS+A+ EMN +M+  KPLYVA+AQRK+ 
Sbjct: 414 NKENKAESKKSEKKPLGKSKGFGFVCFSSPDEASKAVTEMNQRMVHGKPLYVALAQRKDV 473

Query: 393 RRARLQAQFSQ-------------------MRP-VAMGPS-------------------V 413
           RR++L+A                       M+P V  GP                    V
Sbjct: 474 RRSQLEASIQARNTIRQQQAAAAAGMPQPFMQPAVFYGPGQQNFIPNQRGGMPFQQPGMV 533

Query: 414 PPRMP-----------------------MYPPGPSGLGQQFLYGQAPPAIIP-----PQM 445
            P MP                         PP   G+G Q L      A IP     PQM
Sbjct: 534 IPGMPGGRHGQFGGFPGQQGGRGMNPNQQIPPNAYGIGAQGLPMGMQGAGIPNGLNYPQM 593

Query: 446 ----PPRGHAY-RYPLGRNMQDFPFDMGAGSML--PVPVDMGAGIPRRDASVGQPMPITA 498
                P G    + P G+ M      MG G      +PV  G G P + A  GQ  P  A
Sbjct: 594 GQVQAPFGRGRGQAPSGQGMPPNVQGMGPGGQYGRGMPVQQGMGRPGQ-AGRGQGAPAQA 652

Query: 499 LSTALANASPE-------------QQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTE 545
           +     NASP              QQ+ +LGE++YP ++  + + A K+TGMLLEMD  E
Sbjct: 653 VGQRDENASPNGLTLQVLNAAPPAQQKQMLGEAIYPKIQAQQPELAGKITGMLLEMDNAE 712

Query: 546 VLHLLESPEALKAKVAEAMEV 566
           +L L++   ALKAKV EA+ V
Sbjct: 713 LLALVDDDAALKAKVDEALTV 733


>sp|Q6GR16|EPABB_XENLA Embryonic polyadenylate-binding protein B OS=Xenopus laevis
           GN=epabp-b PE=2 SV=1
          Length = 629

 Score =  499 bits (1285), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 282/634 (44%), Positives = 389/634 (61%), Gaps = 76/634 (11%)

Query: 22  ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
           A+  ++   SLY+GDL  +VT++ LY+ FS  G ++S+RVCRD++TRRSLGY Y+N+  P
Sbjct: 3   ATRAEYPLASLYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQP 62

Query: 82  ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
           ADA RALD +NF  +  + IRIM+S RDP +RKSG GN+FIKNLD SID+KAL+DTFS+F
Sbjct: 63  ADAERALDTMNFEVIKGRPIRIMWSQRDPGLRKSGVGNVFIKNLDDSIDNKALYDTFSAF 122

Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
           G+ILSCK+  D  G S+G+GFV FE +E+A  AI  +NGML+ND++VFVGHF  ++ERE 
Sbjct: 123 GDILSCKVVCDEYG-SRGYGFVHFETQEAANRAIQTMNGMLLNDRKVFVGHFKSRREREL 181

Query: 202 V--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
              A   +F NV++KN  E   D+ LK+IF  +G   S  VM D  G+S+ FGFVN+ N 
Sbjct: 182 EYGAKVMEFTNVYIKNFGEDMDDKRLKEIFSAFGNTLSVKVMMDNSGRSRGFGFVNYGNH 241

Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
           ++A KAV  +NGK+ + R  YVG+AQK+ ER+ ELK +FEQ  +E ++++QG+NLY+KNL
Sbjct: 242 EEAQKAVTEMNGKEVNGRMVYVGRAQKRIERQGELKRKFEQIKQERINRYQGVNLYVKNL 301

Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
            D IDD++L++ FS +GTITS KVM +  G SKG GFV FS+PEEA++A+ EMNG+++ +
Sbjct: 302 DDGIDDDRLRKEFSPYGTITSTKVMTE-GGHSKGFGFVCFSSPEEATKAVTEMNGRIVST 360

Query: 380 KPLYVAVAQRKEERRARLQAQFSQ----MRPVAMGPSVP----------PRMP------M 419
           KPLYVA+AQRKEER+A L  Q+ Q    MR +  GP +           P MP       
Sbjct: 361 KPLYVALAQRKEERKAILTNQYMQRLATMRAMP-GPLLGSFQQPANYFLPTMPQPSNRAF 419

Query: 420 YPPGPSG----LGQQFLYGQAPPAIIPP-----QMPPR-------------GHAYRYPLG 457
           Y P P        Q   +   PP   PP      +PPR                 R PL 
Sbjct: 420 YSPNPVAPVRPAPQWASHQSRPPQYQPPAPLMRAVPPRRMHSNISTMKQASTQVPRVPLQ 479

Query: 458 RNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVG----QPM------------------- 494
                      AG+   V   +   +P    S G    QP+                   
Sbjct: 480 SQRVANIGTQTAGARAQVNASIMRAMPHYKYSCGVRNVQPIGSSAHLQQVLEPAVLMQGQ 539

Query: 495 -PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESP 553
            P+TA  + LA A  ++Q+ +LGE +YPL+ ++    A K+TGMLLE+D +E+LH+LESP
Sbjct: 540 EPLTA--SLLAAAPLQEQKQILGERIYPLIHEMHPTLAGKITGMLLEIDNSELLHMLESP 597

Query: 554 EALKAKVAEAMEVLRSVAQQQANNPADQLASLSL 587
           E+L +KV EA+ VL++    QA   A + A  SL
Sbjct: 598 ESLHSKVEEAVAVLQA---HQAKESAPKSAPQSL 628


>sp|Q98SP8|EPABA_XENLA Embryonic polyadenylate-binding protein A OS=Xenopus laevis
           GN=epabp-a PE=1 SV=2
          Length = 629

 Score =  499 bits (1284), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 279/634 (44%), Positives = 389/634 (61%), Gaps = 76/634 (11%)

Query: 22  ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
           A+G  +   SLY+GDL  +VT++ LY+ FS  G ++S+RVCRD++TRRSL Y Y+N+  P
Sbjct: 3   ATGAGYPLASLYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLSYAYINFQQP 62

Query: 82  ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
           ADA RALD +NF  +  + IRIM+S RDP +RKSG GN+FIKNLD+SID+KAL+DTFS+F
Sbjct: 63  ADAERALDTMNFEVIKGRPIRIMWSQRDPGLRKSGVGNVFIKNLDESIDNKALYDTFSAF 122

Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
           GNILSCK+  D  G S+G+GFV FE  E+A  AI  +NGML+ND++VFVGHF  ++ERE 
Sbjct: 123 GNILSCKVVCDEHG-SRGYGFVHFETHEAANRAIQTMNGMLLNDRKVFVGHFKSRREREL 181

Query: 202 V--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
              A   +F NV++KN  E   D+ L++IF  +G   S  VM D  G+S+ FGFVN+ N 
Sbjct: 182 EYGAKVMEFTNVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDDSGRSRGFGFVNYGNH 241

Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
           ++A KAV  +NGK+ + R  YVG+AQK+ ER+ ELK +FEQ  +E ++++QG+NLY+KNL
Sbjct: 242 EEAQKAVSEMNGKEVNGRMIYVGRAQKRIERQSELKRKFEQIKQERINRYQGVNLYVKNL 301

Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
            D IDD++L++ F  +GTITS KVM +  G SKG GFV FS+PEEA++A+ EMNG+++ +
Sbjct: 302 DDGIDDDRLRKEFLPYGTITSAKVMTE-GGHSKGFGFVCFSSPEEATKAVTEMNGRIVST 360

Query: 380 KPLYVAVAQRKEERRARLQAQFSQ----MRPVAMGPSV----------------PPRMPM 419
           KPLYVA+AQRKEER+A L  Q+ Q    MR +  GP +                PP    
Sbjct: 361 KPLYVALAQRKEERKAILTNQYMQRLATMRAMP-GPLLGSFQQPANYFLSAMPQPPNRTF 419

Query: 420 YPPGPSG----LGQQFLYGQAPPAIIPPQ------MPPRGHAYRYPLGRNMQDFP----- 464
           Y P P        Q   +   PP   PP        P R  +    + +     P     
Sbjct: 420 YSPNPVAPVRPAPQWASHQSRPPQYQPPTPLMRAVQPRRMSSNISTMKQASTQVPRVAQH 479

Query: 465 ----FDMG---AGSMLPVPVDMGAGIPRRDASVG----QPM------------------- 494
                ++G   AG+   V   M   +P    S G    QP+                   
Sbjct: 480 SQRVANIGTQTAGARAQVNPSMMRTMPHYKYSCGVRNVQPIVSSTHLQQVMEPAVLMQGQ 539

Query: 495 -PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESP 553
            P+TA  + LA A P++Q+ +LGE +YP++ ++    A K+TGMLLE+D +E+LH+LESP
Sbjct: 540 EPLTA--SLLAGAPPQEQKQMLGERIYPVIHEMHPTLAGKITGMLLEIDNSELLHMLESP 597

Query: 554 EALKAKVAEAMEVLRSVAQQQANNPADQLASLSL 587
           E+L +KV EA+ VL++    QA   A + A  SL
Sbjct: 598 ESLHSKVEEAVAVLQA---HQAKENAQKSAQPSL 628


>sp|P0CP46|PABP_CRYNJ Polyadenylate-binding protein, cytoplasmic and nuclear
           OS=Cryptococcus neoformans var. neoformans serotype D
           (strain JEC21 / ATCC MYA-565) GN=PAB1 PE=3 SV=1
          Length = 673

 Score =  498 bits (1283), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 274/599 (45%), Positives = 375/599 (62%), Gaps = 60/599 (10%)

Query: 28  LTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARA 87
           ++ SLYVG+LD +VT++ L+++F+ +G V S+RVCRD  TRRSLGY YVNY N AD  RA
Sbjct: 44  VSASLYVGELDPSVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERA 103

Query: 88  LDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSC 147
           L+ LN++ +  +S RIM+S RDP++RK+G GNIFIKNLD+SID+KALHDTF++FG+ILSC
Sbjct: 104 LEHLNYSLIKGQSCRIMWSQRDPALRKTGQGNIFIKNLDQSIDNKALHDTFAAFGDILSC 163

Query: 148 KIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER--ETVAIK 205
           K+ TD +G+S+GF FV +   E+A  AI  +NGML+NDK+V+VGH + K+ER  +   ++
Sbjct: 164 KVGTDENGKSRGFAFVHYSTGEAADAAIKAVNGMLLNDKKVYVGHHVGKKERLSKVEELR 223

Query: 206 TKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKA 265
            +F NV++KN+D   TD + + +   +G   S  + RD  G SK FGFVN+EN + A KA
Sbjct: 224 AQFTNVYIKNVDLEVTDAEFEDLVKPFGPTISVALSRDEKGVSKGFGFVNYENHESARKA 283

Query: 266 VEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDD 325
           V+ LN K+ + ++ Y G+AQ KSERE ELK   E+   E   K  G+NLY+KNL D  DD
Sbjct: 284 VDELNEKEVNGKKLYAGRAQTKSEREAELKKSHEEKRLENEAKSAGVNLYVKNLDDEWDD 343

Query: 326 EKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVA 385
           ++L+  F  FGTITS KVMRD SG+S+G GFV +S+P+EA++A++EMNGKMI +KPLYVA
Sbjct: 344 DRLRAEFEAFGTITSSKVMRDDSGVSRGFGFVCYSSPDEATKAVSEMNGKMIGTKPLYVA 403

Query: 386 VAQRKEERRARLQAQFSQMR----------PVAMG-------------------PSVPP- 415
           +AQRK+ RR  L++Q +Q            P   G                   P +PP 
Sbjct: 404 LAQRKDVRRQALESQIAQRAQQRMQYGAGFPGMQGYMGQPMYGYPPMPGYGQPMPGMPPV 463

Query: 416 RMPM--YPPGPSGLGQ---------QFLYGQAPPAIIPPQMPPRGHAYRYPL---GRNMQ 461
           R PM  YP  P  + Q         Q L G  P   +PPQ+P  G A  YP+   G  + 
Sbjct: 464 RGPMMGYPGAPQNMMQSRPRFNPNGQPLPGGVPAYGMPPQVPYPG-APGYPVRPGGARIP 522

Query: 462 DFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALSTA-------------LANASP 508
             P   G  +  P PV    G+P      G  MP      A             LA A+P
Sbjct: 523 AAPNANGPRNGGPSPVGAPQGLPAGSIPRGGQMPARPHEQAAPAPQAGRLDAQSLARAAP 582

Query: 509 EQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVL 567
            +Q+ +LGE+LYPL+ + + + A K+TGMLLEMD  E+LHL+ES  AL+ KV EA+ VL
Sbjct: 583 AEQKQMLGEALYPLIHETQPELAGKITGMLLEMDNAELLHLVESQPALQEKVDEALRVL 641


>sp|P0CP47|PABP_CRYNB Polyadenylate-binding protein, cytoplasmic and nuclear
           OS=Cryptococcus neoformans var. neoformans serotype D
           (strain B-3501A) GN=PAB1 PE=3 SV=1
          Length = 673

 Score =  498 bits (1283), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 274/599 (45%), Positives = 375/599 (62%), Gaps = 60/599 (10%)

Query: 28  LTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARA 87
           ++ SLYVG+LD +VT++ L+++F+ +G V S+RVCRD  TRRSLGY YVNY N AD  RA
Sbjct: 44  VSASLYVGELDPSVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERA 103

Query: 88  LDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSC 147
           L+ LN++ +  +S RIM+S RDP++RK+G GNIFIKNLD+SID+KALHDTF++FG+ILSC
Sbjct: 104 LEHLNYSLIKGQSCRIMWSQRDPALRKTGQGNIFIKNLDQSIDNKALHDTFAAFGDILSC 163

Query: 148 KIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER--ETVAIK 205
           K+ TD +G+S+GF FV +   E+A  AI  +NGML+NDK+V+VGH + K+ER  +   ++
Sbjct: 164 KVGTDENGKSRGFAFVHYSTGEAADAAIKAVNGMLLNDKKVYVGHHVGKKERLSKVEELR 223

Query: 206 TKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKA 265
            +F NV++KN+D   TD + + +   +G   S  + RD  G SK FGFVN+EN + A KA
Sbjct: 224 AQFTNVYIKNVDLEVTDAEFEDLVKPFGPTISVALSRDEKGVSKGFGFVNYENHESARKA 283

Query: 266 VEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDD 325
           V+ LN K+ + ++ Y G+AQ KSERE ELK   E+   E   K  G+NLY+KNL D  DD
Sbjct: 284 VDELNEKEVNGKKLYAGRAQTKSEREAELKKSHEEKRLENEAKSAGVNLYVKNLDDEWDD 343

Query: 326 EKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVA 385
           ++L+  F  FGTITS KVMRD SG+S+G GFV +S+P+EA++A++EMNGKMI +KPLYVA
Sbjct: 344 DRLRAEFEAFGTITSSKVMRDDSGVSRGFGFVCYSSPDEATKAVSEMNGKMIGTKPLYVA 403

Query: 386 VAQRKEERRARLQAQFSQMR----------PVAMG-------------------PSVPP- 415
           +AQRK+ RR  L++Q +Q            P   G                   P +PP 
Sbjct: 404 LAQRKDVRRQALESQIAQRAQQRMQYGAGFPGMQGYMGQPMYGYPPMPGYGQPMPGMPPV 463

Query: 416 RMPM--YPPGPSGLGQ---------QFLYGQAPPAIIPPQMPPRGHAYRYPL---GRNMQ 461
           R PM  YP  P  + Q         Q L G  P   +PPQ+P  G A  YP+   G  + 
Sbjct: 464 RGPMMGYPGAPQNMMQSRPRFNPNGQPLPGGVPAYGMPPQVPYPG-APGYPVRPGGARIP 522

Query: 462 DFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALSTA-------------LANASP 508
             P   G  +  P PV    G+P      G  MP      A             LA A+P
Sbjct: 523 AAPNANGPRNGGPSPVGAPQGLPAGSIPRGGQMPARPHEQAAPAPQAGRLDAQSLARAAP 582

Query: 509 EQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVL 567
            +Q+ +LGE+LYPL+ + + + A K+TGMLLEMD  E+LHL+ES  AL+ KV EA+ VL
Sbjct: 583 AEQKQMLGEALYPLIHETQPELAGKITGMLLEMDNAELLHLVESQPALQEKVDEALRVL 641


>sp|P31209|PABP_SCHPO Polyadenylate-binding protein, cytoplasmic and nuclear
           OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
           GN=pab1 PE=1 SV=2
          Length = 653

 Score =  496 bits (1277), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 272/585 (46%), Positives = 373/585 (63%), Gaps = 36/585 (6%)

Query: 20  AGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYA 79
           A  SG    + SLYVG+LD +VT++ L++LF+ +G V S+RVCRD  TRRSLGY YVN+ 
Sbjct: 70  ATPSGTAPTSASLYVGELDPSVTEAMLFELFNSIGPVASIRVCRDAVTRRSLGYAYVNFH 129

Query: 80  NPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFS 139
           N  D  +ALD LN+T +  +  RIM+S RDPS+RK GTGN+FIKNLD +ID+KALHDTFS
Sbjct: 130 NMEDGEKALDELNYTLIKGRPCRIMWSQRDPSLRKMGTGNVFIKNLDPAIDNKALHDTFS 189

Query: 140 SFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER 199
           +FG ILSCK+A D  G +KG+GFV F++ ESA  AI+ +NGML+NDK+V+VGH + ++ER
Sbjct: 190 AFGKILSCKVAVDELGNAKGYGFVHFDSVESANAAIEHVNGMLLNDKKVYVGHHVSRRER 249

Query: 200 ETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFE 257
           ++   A+K  F NV++KNLD   T+++   +FG++G ITS  +++D + K + FGFVN+ 
Sbjct: 250 QSKVEALKANFTNVYIKNLDTEITEQEFSDLFGQFGEITSLSLVKDQNDKPRGFGFVNYA 309

Query: 258 NADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIK 317
           N + A KAV+ LN K++  ++ YVG+AQKK ERE+EL+ ++EQ   E ++K+QG+NL+IK
Sbjct: 310 NHECAQKAVDELNDKEYKGKKLYVGRAQKKHEREEELRKRYEQMKLEKMNKYQGVNLFIK 369

Query: 318 NLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMI 377
           NL D +DDE+LK  FS FGTITS K+M D  G SKG GFV ++TPEEA++A+ EMN +M+
Sbjct: 370 NLQDEVDDERLKAEFSAFGTITSAKIMTDEQGKSKGFGFVCYTTPEEANKAVTEMNQRML 429

Query: 378 VSKPLYVAVAQRKEERRARLQAQF---SQMR--------------------PVAMGPSVP 414
             KPLYVA+AQRKE RR++L+AQ    +Q R                    P+  GP   
Sbjct: 430 AGKPLYVALAQRKEVRRSQLEAQIQARNQFRLQQQVAAAAGIPAVQYGATGPLIYGPGGY 489

Query: 415 PRMPMYPPGPSGLGQQFLYGQAPPAI----IPPQMPPRGHAYRYPLGRNMQDFPFDMGAG 470
           P     P   +G G   + G   P      +P Q P  G A  YP G N +      G  
Sbjct: 490 P----IPAAVNGRGMPMVPGHNGPMPMYPGMPTQFPAGGPAPGYP-GMNARGPVPAQGRP 544

Query: 471 SMLPVPVDMGAGIPRRDASVGQP-MPITALSTALANASPEQQRTLLGESLYPLVEQLERD 529
            M+P  V   AG    +A    P MP    +  LA    E ++ +LGE LYP V   E  
Sbjct: 545 MMMPGSVP-SAGPAEAEAVPAVPGMPERFTAADLAAVPEESRKQVLGELLYPKVFVREEK 603

Query: 530 AAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQ 574
            + K+TGMLLEM  +E+L LLE   AL  +V EA+ VL+    Q+
Sbjct: 604 LSGKITGMLLEMPNSELLELLEDDSALNERVNEAIGVLQEFVDQE 648


>sp|Q0CR95|PABP_ASPTN Polyadenylate-binding protein, cytoplasmic and nuclear
           OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156)
           GN=pab1 PE=3 SV=1
          Length = 753

 Score =  493 bits (1269), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 293/682 (42%), Positives = 388/682 (56%), Gaps = 142/682 (20%)

Query: 23  SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
           S +Q  + SLYVG+LD +VT++ LY+LFS +GQV S+RVCRD  TRRSLGY YVNY N A
Sbjct: 41  STSQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTA 100

Query: 83  DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
           D  RAL+ LN+T +  K  RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++FG
Sbjct: 101 DGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDTFAAFG 160

Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 202
           NILSCK+A D  G SKG+GFV +E  E+A NAI  +NGML+NDK+VFVGH + K++R++ 
Sbjct: 161 NILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSK 220

Query: 203 --AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
              +K  F NV++KNLD+  ++E+ +++F ++G ITSA + RD +GKS+ FGFVN+   D
Sbjct: 221 FEEMKANFTNVYIKNLDQEISEEEFRQMFEKFGEITSATLSRDQEGKSRGFGFVNYSTHD 280

Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
            A  AV+ +N K+   ++ YVG+AQKK ERE+EL+ Q+E A  E   K+QG+NLY+KNL 
Sbjct: 281 SAQAAVDEMNDKEVKGQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLT 340

Query: 321 DSIDDEKLKELFSEFGTITSCKVMRDPS-------------------------------- 348
           D IDDEKL+E+F+ +GTITS KVMRD +                                
Sbjct: 341 DDIDDEKLREMFAPYGTITSAKVMRDTNIERTQTPDSDKEKKEESKEEKPEAAEKTEEAA 400

Query: 349 -------------------GISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQR 389
                              G SKG GFV FS+P+EAS+A+ EMN +MI  KPLYVA+AQR
Sbjct: 401 KESGDDQDKENKKSDKKVLGKSKGFGFVCFSSPDEASKAVTEMNQRMINGKPLYVALAQR 460

Query: 390 KEERRARLQAQFSQ-------------------MRP-VAMGP------------------ 411
           K+ RR++L+A                       M+P V  GP                  
Sbjct: 461 KDVRRSQLEASIQARNTIRQQQAAAAAGMPQPYMQPAVFYGPGQQGFIPGGQRGGLPFAP 520

Query: 412 ------SVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPPQ---------MPPRG--HAYRY 454
                  VP   P   PGP   GQQ   G  P   IPP          M P G  +   Y
Sbjct: 521 QPGMMMGVPGGRPGQYPGPF-PGQQGGRGMGPNQQIPPNFAQGIPMGAMGPGGIPNGMGY 579

Query: 455 PLGRNMQDFPFDMGAGSMLPVP-VDMGAG------------IPRRD-------------- 487
           P    M    F  GAG    VP + MG G            +P +               
Sbjct: 580 P---QMGQVQFGRGAGGRGQVPGMPMGQGMRGPGYGQGRGGVPVQGQMRPGQGGRGQNAQ 636

Query: 488 --ASVGQPMPITALST-ALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQT 544
             A  G+  P   L+  +LA A   QQ+ +LGE+LYP ++  + + A K+TGMLLEMD T
Sbjct: 637 PAAGRGEEAPAAGLTAQSLAAAPAPQQKQMLGEALYPKIQAQQPELAGKITGMLLEMDNT 696

Query: 545 EVLHLLESPEALKAKVAEAMEV 566
           E+L LLE  EAL+AKV EA+ V
Sbjct: 697 ELLSLLEDDEALRAKVDEALSV 718


>sp|Q4P8R9|PABP_USTMA Polyadenylate-binding protein, cytoplasmic and nuclear OS=Ustilago
           maydis (strain 521 / FGSC 9021) GN=PAB1 PE=3 SV=1
          Length = 651

 Score =  481 bits (1239), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 280/597 (46%), Positives = 392/597 (65%), Gaps = 63/597 (10%)

Query: 29  TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
            TSLYVG+LD +VT++ L+++FS +G V S+RVCRD  TRRSLGY YVN+ N AD  RA+
Sbjct: 46  NTSLYVGELDPSVTEAMLFEIFSMIGTVASIRVCRDAVTRRSLGYAYVNFLNAADGERAM 105

Query: 89  DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
           + LN++ + N+  RIM+S RDP++R++G GNIFIKNLD  ID+KALHDTF++FGNILSCK
Sbjct: 106 EQLNYSLIRNRPCRIMWSQRDPALRRTGQGNIFIKNLDAGIDNKALHDTFAAFGNILSCK 165

Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK- 207
           +AT+ +G S G+GFV +E  E+A+ AI  +NGML+NDK+V+VGH + ++ER+    +T+ 
Sbjct: 166 VATNETG-SLGYGFVHYETAEAAEAAIKHVNGMLLNDKKVYVGHHIPRKERQAKIEETRA 224

Query: 208 -FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
            F NV+ KN+D   TD++ +K+F ++G ITS V+ RD DGKSK FGFVNFE+ ++A KAV
Sbjct: 225 NFTNVYAKNVDPEVTDDEFEKLFTKFGKITSCVLQRDEDGKSKGFGFVNFEDHNEAQKAV 284

Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
           + L+   F  ++ +V +AQKKSERE+EL+  +E A  E + KFQG+NLY+KN+ +S DDE
Sbjct: 285 DELHDSDFKGQKLFVARAQKKSEREEELRRSYEAAKNEKLAKFQGVNLYLKNIPESYDDE 344

Query: 327 KLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 386
           +L+E F+ FG ITSCK+MR PSG+S+G GFV +S PEEA++A++EMNGKM+ ++PLYVA+
Sbjct: 345 RLREEFAPFGAITSCKIMRAPSGVSRGFGFVCYSAPEEANKAVSEMNGKMLDNRPLYVAL 404

Query: 387 AQRKEERRARLQAQF-------SQMRPVAMGPSVP------PRMPMYPPGPSGLGQQFLY 433
           AQRK+ RR +L+AQ         Q +  A G   P      P+   +P  P G+  +  Y
Sbjct: 405 AQRKDVRRQQLEAQIMQRNQLRLQQQAAAQGMGYPGPGMYYPQPGAFPGQPGGMVPRPRY 464

Query: 434 GQAPPAIIPPQMP--PRGHAYRYPLGRNMQDF---------------------------- 463
             AP  ++P  MP  P G   ++P G   Q +                            
Sbjct: 465 --APAGMMPQGMPMAPYGQPGQFPAGMMPQGYRPARPPRGAPNAAGGPAPPAGARPPTGV 522

Query: 464 ---PFDMGAGSMLPVPVDMGAGIPRRDAS--VGQP---MPITALSTALANASPEQQRTLL 515
              P   G     PVP   G  +PR  A+   G+P    P    + ALA ASPE+Q+ +L
Sbjct: 523 NGAPRPAGQ----PVP---GQPMPRGPAARPAGRPEADQPGALTAAALAKASPEEQKQML 575

Query: 516 GESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQ 572
           GE++YP V   + + A K+TGM+LE+  TE+LHLLE  EAL AKV EA+EVL+   Q
Sbjct: 576 GEAIYPKVAASQPELAGKLTGMILELPVTELLHLLEESEALDAKVNEALEVLKEYQQ 632



 Score = 49.3 bits (116), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 3/100 (3%)

Query: 291 EQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP-SG 349
           EQ   G  EQ  +   D     +LY+  L  S+ +  L E+FS  GT+ S +V RD  + 
Sbjct: 28  EQPAVGNGEQ--RNNADAANNTSLYVGELDPSVTEAMLFEIFSMIGTVASIRVCRDAVTR 85

Query: 350 ISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQR 389
            S G  +V F    +  RA+ ++N  +I ++P  +  +QR
Sbjct: 86  RSLGYAYVNFLNAADGERAMEQLNYSLIRNRPCRIMWSQR 125


>sp|A1D4K4|PABP_NEOFI Polyadenylate-binding protein, cytoplasmic and nuclear
           OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 /
           FGSC A1164 / NRRL 181) GN=pab1 PE=3 SV=1
          Length = 751

 Score =  481 bits (1238), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 299/679 (44%), Positives = 389/679 (57%), Gaps = 133/679 (19%)

Query: 19  AAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNY 78
           +A  S NQ  + SLYVG+LD +VT++ LY+LFS +GQV S+RVCRD  TRRSLGY YVNY
Sbjct: 41  SATPSANQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNY 100

Query: 79  ANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTF 138
            N AD  RAL+ LN+T +  K  RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF
Sbjct: 101 NNTADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDTF 160

Query: 139 SSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQE 198
           ++FGNILSCK+A D  G SKG+GFV +E  E+A NAI  +NGML+NDK+VFVGH + K++
Sbjct: 161 AAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKD 220

Query: 199 RETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNF 256
           R++    +K  F NV++KN+D+  TDE+ +K+F ++G ITSA + RD +GKS+ FGFVNF
Sbjct: 221 RQSKFEEMKANFTNVYIKNIDQEVTDEEFRKMFEKFGEITSATLSRDQEGKSRGFGFVNF 280

Query: 257 ENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYI 316
              D A  AV+ +N K+   ++ YVG+AQKK ERE+EL+ Q+E A  E   K+QG+NLY+
Sbjct: 281 STHDSAQAAVDEMNDKEIKGQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYV 340

Query: 317 KNLGDSIDDEKLKELFSEFGTITSCKVMRDPS---------------------------- 348
           KNL D +DDEKL+ELFS FGTITS KVMRD                              
Sbjct: 341 KNLTDDVDDEKLRELFSPFGTITSAKVMRDTVTAGETSESEKEKESNKENEKEGEEKTEE 400

Query: 349 -----------------GISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKE 391
                            G SKG GFV FS+P+EAS+A+ EMN +M+  KPLYVA+AQRK+
Sbjct: 401 KPKESEEEAKKTEKKILGKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKPLYVALAQRKD 460

Query: 392 ERRARLQAQFSQ-------------------MRP-VAMGP-------------------- 411
            RR++L+A                       M+P V  GP                    
Sbjct: 461 VRRSQLEASIQARNTIRQQQAAAAAGMPQPYMQPAVFYGPGQQGFIPAGQRGGMPFAPQP 520

Query: 412 ----SVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPP--QMPPRGHAYRYPLG-RNMQDFP 464
                +P   P   PGP   GQQ   G  P   IPP  Q  P G A + P G  N   +P
Sbjct: 521 GMVMGIPGGRPGQYPGPF-PGQQGGRGMGPNQQIPPNFQGIPMG-AMQGPGGIPNGMGYP 578

Query: 465 ------FDMGAGSMLPVP-VDMGAGIPRRDASVG-------------------------- 491
                 F  GAG    VP + MG G+       G                          
Sbjct: 579 QMAQVQFGRGAGGRGQVPGMPMGQGMRGPGYGQGRGGAPVQGGPRPQGGRGQPAAAPPAA 638

Query: 492 --QPMPITALSTA--LANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVL 547
             + +P T   TA  L    P QQ+ +LGE+LYP ++  + + A K+TGMLLEMD TE+L
Sbjct: 639 GREEVPATGGLTAQTLNAVPPPQQKQMLGEALYPKIQAQQPELAGKITGMLLEMDNTELL 698

Query: 548 HLLESPEALKAKVAEAMEV 566
            LLE  EAL+AKV EA+ V
Sbjct: 699 GLLEDEEALRAKVDEALSV 717


>sp|Q54BM2|PAP1A_DICDI Polyadenylate-binding protein 1-A OS=Dictyostelium discoideum
           GN=pabpc1A PE=1 SV=1
          Length = 565

 Score =  480 bits (1235), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 275/582 (47%), Positives = 358/582 (61%), Gaps = 65/582 (11%)

Query: 28  LTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARA 87
           +++SLYVGDL   V++  L+++F+QVG V ++RVCRD +TRRSL Y YVNY N ADA RA
Sbjct: 8   ISSSLYVGDLLPEVSEQHLFEIFNQVGLVSNIRVCRDTNTRRSLSYAYVNYYNGADAERA 67

Query: 88  LDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSC 147
           LD LN TP+  K+ RIM+S RDPS+RKSG GN+FIKNLDK IDHKAL+DTFS+FGNILSC
Sbjct: 68  LDTLNNTPIRGKACRIMWSQRDPSLRKSGVGNVFIKNLDKGIDHKALYDTFSAFGNILSC 127

Query: 148 KIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK 207
           K+ TD    SKGFGFV +E +ESA  AI K+NGM+IN ++VFVG F   +ER     + K
Sbjct: 128 KVVTDDGNSSKGFGFVHYETQESADKAIAKVNGMMINGQKVFVGPFKSSKERGQ-PTEVK 186

Query: 208 FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVE 267
           F NVF KNL E    + LK++  +YG IT+  +M D  GKSK FGF NFE+A+ A   VE
Sbjct: 187 FTNVFFKNLSEDVGPDQLKELLQQYGEITNITIMADDKGKSKGFGFANFESAEAAKNVVE 246

Query: 268 ALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEK 327
             NGK F  +  Y G+AQKK ERE ELK  FE        K+QG+NLYIKN+ DSID++K
Sbjct: 247 NENGKIFHGKPIYAGRAQKKIEREAELKHTFE-------TKYQGVNLYIKNIDDSIDNDK 299

Query: 328 LKELFSEFGTITSCKVMR-DPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 386
           L+E+FS+FGTITS  VM+ D +  SKG GFV ++ P+EA+RA+ EMNG+MI +KPLYVA+
Sbjct: 300 LREVFSQFGTITSAIVMKDDKATTSKGFGFVCYTAPDEATRAVTEMNGRMIGTKPLYVAL 359

Query: 387 AQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAP--PAIIPPQ 444
           AQRK+ RRA+L+ Q  Q     +   +P   P Y  GP        +  AP  P ++  Q
Sbjct: 360 AQRKDIRRAQLEMQHQQKFKTGIRQQMP---PTYGSGP------VFFTPAPVNPQVVYQQ 410

Query: 445 MPPRGHAY---------------RYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDAS 489
           M PR   +                Y  G+  Q+ P   G       P   G   PR D S
Sbjct: 411 MMPRPRNWNGQPVGVPQGQYANMNYARGQPRQNGPRQNGGQ-----PRQNG---PRPDVS 462

Query: 490 VGQPMPITALST--------ALANA-------------SPEQQRTLLGESLYPLVEQLER 528
             QP+P+   +T        A ++A             S +QQ   LGE LYPL+   + 
Sbjct: 463 GAQPIPVQQQTTLDVAQTQQAASSAESALNLQSIINLPSRDQQNVALGEHLYPLIHNSQP 522

Query: 529 DAAAKVTGMLLE-MDQTEVLHLLESPEALKAKVAEAMEVLRS 569
           D A K+TGMLL+ +   E+  L +  + L  K+ EA+EVL S
Sbjct: 523 DLAGKITGMLLDSLPVEELFTLTQRQDLLADKIREALEVLGS 564


>sp|Q4WK03|PABP_ASPFU Polyadenylate-binding protein, cytoplasmic and nuclear
           OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 /
           CBS 101355 / FGSC A1100) GN=pab1 PE=3 SV=1
          Length = 753

 Score =  478 bits (1231), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 297/677 (43%), Positives = 387/677 (57%), Gaps = 135/677 (19%)

Query: 23  SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
           S +Q  + SLYVG+LD +VT++ LY+LFS +GQV S+RVCRD  TRRSLGY YVNY N A
Sbjct: 45  SASQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTA 104

Query: 83  DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
           D  RAL+ LN+T +  K  RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++FG
Sbjct: 105 DGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDTFAAFG 164

Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 202
           NILSCK+A D  G SKG+GFV +E  E+A NAI  +NGML+NDK+VFVGH + K++R++ 
Sbjct: 165 NILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSK 224

Query: 203 --AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
              +K  F NV++KN+D+  TDE+ +K+F ++G ITSA + RD +GKS+ FGFVNF   D
Sbjct: 225 FEEMKANFTNVYIKNIDQEVTDEEFRKMFEKFGEITSATLSRDQEGKSRGFGFVNFSTHD 284

Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
            A  AV+ +N K+   ++ YVG+AQKK ERE+EL+ Q+E A  E   K+QG+NLY+KNL 
Sbjct: 285 SAQAAVDEMNDKEIKGQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLT 344

Query: 321 DSIDDEKLKELFSEFGTITSCKVMRDPS-------------------------------- 348
           D +DDEKL+ELFS FGTITS KVMRD                                  
Sbjct: 345 DDVDDEKLRELFSPFGTITSAKVMRDTVTTGETSESEKEKEKESNKENEKEGEEKTEEKP 404

Query: 349 ---------------GISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEER 393
                          G SKG GFV FS+P+EAS+A+ EMN +M+  KPLYVA+AQRK+ R
Sbjct: 405 KESEEEPKKTEKKILGKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKPLYVALAQRKDVR 464

Query: 394 RARLQAQFSQ-------------------MRP-VAMGP---------------------- 411
           R++L+A                       M+P V  GP                      
Sbjct: 465 RSQLEASIQARNTIRQQQAAAAAGMPQPYMQPAVFYGPGQQGFIPAGQRGGMPFAPQPGM 524

Query: 412 --SVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPP--QMPPRGHAYRYPLG-RNMQDFP-- 464
              +P   P   PGP   GQQ   G  P   IPP  Q  P G A + P G  N   +P  
Sbjct: 525 VMGIPGGRPGQYPGPF-PGQQGGRGMGPNQQIPPNFQGIPMG-AMQGPGGIPNGMGYPQM 582

Query: 465 ----FDMGAGSMLPVP-VDMGAGIPRRDASVG---------------------------- 491
               F  GAG    VP + MG GI       G                            
Sbjct: 583 AQVQFGRGAGGRGQVPGMPMGQGIRGPGYGQGRGGAPVQGGPRPQGGRGQPAAAPPAAGR 642

Query: 492 QPMPITALSTA--LANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHL 549
           + +P T   TA  L+   P QQ+ +LGE+LYP ++  + + A K+TGMLLEMD  E+L L
Sbjct: 643 EEVPATGGLTAQTLSAVPPPQQKQMLGEALYPKIQAQQPELAGKITGMLLEMDNNELLGL 702

Query: 550 LESPEALKAKVAEAMEV 566
           LE  EAL+AKV EA+ V
Sbjct: 703 LEDEEALRAKVDEALSV 719



 Score =  176 bits (445), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 101/300 (33%), Positives = 161/300 (53%), Gaps = 21/300 (7%)

Query: 110 PSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENK 168
           PS  +  + ++++  LD S+    L++ FSS G + S ++  D  + +S G+ +V + N 
Sbjct: 44  PSASQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNT 103

Query: 169 ESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKI 228
              + A++ LN  LI  K   +       +R+    KT   NVF+KNLD +  ++ L   
Sbjct: 104 ADGERALEDLNYTLIKGKPCRI----MWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDT 159

Query: 229 FGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKS 288
           F  +G I S  V +D  G SK +GFV++E A+ A  A++ +NG   +D++ +VG    K 
Sbjct: 160 FAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKK 219

Query: 289 ERE---QELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMR 345
           +R+   +E+K  F              N+YIKN+   + DE+ +++F +FG ITS  + R
Sbjct: 220 DRQSKFEEMKANF-------------TNVYIKNIDQEVTDEEFRKMFEKFGEITSATLSR 266

Query: 346 DPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
           D  G S+G GFV FST + A  A+ EMN K I  + LYV  AQ+K ER   L+ Q+   R
Sbjct: 267 DQEGKSRGFGFVNFSTHDSAQAAVDEMNDKEIKGQKLYVGRAQKKHEREEELRKQYEAAR 326


>sp|Q7S6N6|PABP_NEUCR Polyadenylate-binding protein, cytoplasmic and nuclear
           OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A /
           CBS 708.71 / DSM 1257 / FGSC 987) GN=pab-1 PE=3 SV=1
          Length = 764

 Score =  471 bits (1213), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 269/670 (40%), Positives = 382/670 (57%), Gaps = 132/670 (19%)

Query: 29  TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
           + SLYVG+LD +VT++ L++LFSQ+G V S+RVCRD  TRRSLGY YVNY   AD  +AL
Sbjct: 59  SASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTADGEKAL 118

Query: 89  DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
           + LN+T +  +  RIM+S RDP++RK+G GNIFIKNLD +ID+KALHDTF++FGNILSCK
Sbjct: 119 EELNYTLIKGRPCRIMWSQRDPALRKTGAGNIFIKNLDAAIDNKALHDTFAAFGNILSCK 178

Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKT 206
           +A D  G SKG+GFV +E  E+A  AI  +NGML+N+K+V+VGH + K++R++    +K 
Sbjct: 179 VAQDEHGNSKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKDRQSKFEEMKA 238

Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
            F NV+VKN++   TDE+ +++F ++G +TS+ + RD +GKS+ FGFVNF   + AA+AV
Sbjct: 239 NFTNVYVKNINNEVTDEEFRELFAKFGEVTSSSLARDQEGKSRGFGFVNFTTHEAAAQAV 298

Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
           + LNGK F  ++ YVG+AQKK ERE+EL+  +E A  E  +K+QG+NLYIKNLGD +DD+
Sbjct: 299 DELNGKDFRGQDLYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLGDDVDDD 358

Query: 327 KLKELFSEFGTITSCKVMRDP--------------------------------------- 347
           KL+ +FSE+G ITS KVMRD                                        
Sbjct: 359 KLRAMFSEYGPITSAKVMRDSLIEGSEEKDEKDKENKKEGETKEEEQNEGSEKKTEKKGD 418

Query: 348 --SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFS--- 402
              G SKG GFV FS P++A++A+ EMN +M+  KPLYVA+AQRK+ R+++L+A      
Sbjct: 419 RKLGKSKGFGFVCFSNPDDATKAVTEMNQRMVDGKPLYVALAQRKDVRKSQLEASIQARN 478

Query: 403 --QMRPVAMGPSVPP-----------RMPMYPPGPSGLGQQFLYGQAPPAI--------- 440
             +M+  A    +P            + P + P P G G  F  G   P +         
Sbjct: 479 QLRMQQAAAQAGMPQQYMQAPVYYAGQQPGFMPAPGGRGVPFPQGGIVPGVQGGRPGQYP 538

Query: 441 --------IPP-QMPPRGHA---------------YRYPLGRNMQ--------------- 461
                   +PP QMPP G+                Y   +G+                  
Sbjct: 539 YQQGGRGGVPPQQMPPMGYPINQFGPGAFPPNTPQYMAAMGQVGALGGGRGGPAGRGPQG 598

Query: 462 ---DFPFDMGAGSMLP------VPVDMGA-GIPRRDASV-----------GQPMPITA-- 498
                P  +  G  +P       P + G  G PR +A+            G P  ++A  
Sbjct: 599 IPAGIPQGLQGGPAVPGYPPAGRPQNGGGRGTPRGNANFMAAGRGASPIPGAPADLSAGS 658

Query: 499 -LSTALANA-SPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEAL 556
            L   LA    P+ Q+ ++GE+L+P ++ ++   A K+TGMLLEMD  E+++L E   AL
Sbjct: 659 FLQAQLATTQDPQAQKQIIGENLFPKIQAIQPALAGKITGMLLEMDNAELINLFEDDNAL 718

Query: 557 KAKVAEAMEV 566
             KV EA+ V
Sbjct: 719 NVKVQEALAV 728


>sp|P29341|PABP1_MOUSE Polyadenylate-binding protein 1 OS=Mus musculus GN=Pabpc1 PE=1 SV=2
          Length = 636

 Score =  470 bits (1209), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 229/406 (56%), Positives = 299/406 (73%), Gaps = 4/406 (0%)

Query: 23  SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
           S   +   SLYVGDL  +VT++ LY+ FS  G +LS+RVCRD+ TRRSLGY YVN+  PA
Sbjct: 4   SAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPA 63

Query: 83  DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
           DA RALD +NF  +  K +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FG
Sbjct: 64  DAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFG 123

Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 202
           NILSCK+  D +G SKG+GFV FE +E+A+ AI+K+NGML+ND++VFVG F  ++ERE  
Sbjct: 124 NILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182

Query: 203 --AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
             A   +F NV++KN  E   DE LK++FG++G   S  VM D  GKSK FGFV+FE  +
Sbjct: 183 LGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHE 242

Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
           DA KAV+ +NGK+ + ++ YVG+AQKK ER+ ELK +FEQ  ++ + ++QG+NLY+KNL 
Sbjct: 243 DAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLD 302

Query: 321 DSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSK 380
           D IDDE+L++ FS FGTITS KVM +  G SKG GFV FS+PEEA++A+ EMNG+++ +K
Sbjct: 303 DGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATK 361

Query: 381 PLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSG 426
           PLYVA+AQRKEER+A L  Q+ Q          P   P  P  PSG
Sbjct: 362 PLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSG 407



 Score =  195 bits (495), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 110/298 (36%), Positives = 173/298 (58%), Gaps = 16/298 (5%)

Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFEN 167
           +PS       ++++ +L   +    L++ FS  G ILS ++  D  + +S G+ +V F+ 
Sbjct: 2   NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61

Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
              A+ A+D +N  +I  K V +       +R+    K+   N+F+KNLD+S  ++ L  
Sbjct: 62  PADAERALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYD 117

Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
            F  +G I S  V+ D +G SK +GFV+FE  + A +A+E +NG   +DR+ +VG+ + +
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 176

Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
            ERE EL  + ++            N+YIKN G+ +DDE+LKELF +FG   S KVM D 
Sbjct: 177 KEREAELGARAKEFT----------NVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDE 226

Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
           SG SKG GFV+F   E+A +A+ EMNGK +  K +YV  AQ+K ER+  L+ +F QM+
Sbjct: 227 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 284



 Score = 83.2 bits (204), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 39/81 (48%), Positives = 63/81 (77%), Gaps = 2/81 (2%)

Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
           P+TA  + LA+A P++Q+ +LGE L+PL++ +    A K+TGMLLE+D +E+LH+LESPE
Sbjct: 544 PLTA--SMLASAPPQEQKQMLGERLFPLIQAMHPSLAGKITGMLLEIDNSELLHMLESPE 601

Query: 555 ALKAKVAEAMEVLRSVAQQQA 575
           +L++KV EA+ VL++   ++A
Sbjct: 602 SLRSKVDEAVAVLQAHQAKEA 622


>sp|Q9EPH8|PABP1_RAT Polyadenylate-binding protein 1 OS=Rattus norvegicus GN=Pabpc1 PE=2
           SV=1
          Length = 636

 Score =  469 bits (1208), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 229/406 (56%), Positives = 299/406 (73%), Gaps = 4/406 (0%)

Query: 23  SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
           S   +   SLYVGDL  +VT++ LY+ FS  G +LS+RVCRD+ TRRSLGY YVN+  PA
Sbjct: 4   SAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPA 63

Query: 83  DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
           DA RALD +NF  +  K +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FG
Sbjct: 64  DAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFG 123

Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 202
           NILSCK+  D +G SKG+GFV FE +E+A+ AI+K+NGML+ND++VFVG F  ++ERE  
Sbjct: 124 NILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182

Query: 203 --AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
             A   +F NV++KN  E   DE LK++FG++G   S  VM D  GKSK FGFV+FE  +
Sbjct: 183 LGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHE 242

Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
           DA KAV+ +NGK+ + ++ YVG+AQKK ER+ ELK +FEQ  ++ + ++QG+NLY+KNL 
Sbjct: 243 DAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLD 302

Query: 321 DSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSK 380
           D IDDE+L++ FS FGTITS KVM +  G SKG GFV FS+PEEA++A+ EMNG+++ +K
Sbjct: 303 DGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATK 361

Query: 381 PLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSG 426
           PLYVA+AQRKEER+A L  Q+ Q          P   P  P  PSG
Sbjct: 362 PLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSG 407



 Score =  194 bits (494), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 110/298 (36%), Positives = 173/298 (58%), Gaps = 16/298 (5%)

Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFEN 167
           +PS       ++++ +L   +    L++ FS  G ILS ++  D  + +S G+ +V F+ 
Sbjct: 2   NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61

Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
              A+ A+D +N  +I  K V +       +R+    K+   N+F+KNLD+S  ++ L  
Sbjct: 62  PADAERALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYD 117

Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
            F  +G I S  V+ D +G SK +GFV+FE  + A +A+E +NG   +DR+ +VG+ + +
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 176

Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
            ERE EL  + ++            N+YIKN G+ +DDE+LKELF +FG   S KVM D 
Sbjct: 177 KEREAELGARAKEFT----------NVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDE 226

Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
           SG SKG GFV+F   E+A +A+ EMNGK +  K +YV  AQ+K ER+  L+ +F QM+
Sbjct: 227 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 284



 Score = 83.6 bits (205), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 39/81 (48%), Positives = 63/81 (77%), Gaps = 2/81 (2%)

Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
           P+TA  + LA+A P++Q+ +LGE L+PL++ +    A K+TGMLLE+D +E+LH+LESPE
Sbjct: 544 PLTA--SMLASAPPQEQKQMLGERLFPLIQAMHPSLAGKITGMLLEIDNSELLHMLESPE 601

Query: 555 ALKAKVAEAMEVLRSVAQQQA 575
           +L++KV EA+ VL++   ++A
Sbjct: 602 SLRSKVDEAVAVLQAHQAKEA 622


>sp|P11940|PABP1_HUMAN Polyadenylate-binding protein 1 OS=Homo sapiens GN=PABPC1 PE=1 SV=2
          Length = 636

 Score =  469 bits (1207), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 229/406 (56%), Positives = 298/406 (73%), Gaps = 4/406 (0%)

Query: 23  SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
           S   +   SLYVGDL  +VT++ LY+ FS  G +LS+RVCRD+ TRRSLGY YVN+  PA
Sbjct: 4   SAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPA 63

Query: 83  DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
           DA RALD +NF  +  K +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FG
Sbjct: 64  DAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFG 123

Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 202
           NILSCK+  D +G SKG+GFV FE +E+A+ AI+K+NGML+ND++VFVG F  ++ERE  
Sbjct: 124 NILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182

Query: 203 --AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
             A   +F NV++KN  E   DE LK +FG++G   S  VM D  GKSK FGFV+FE  +
Sbjct: 183 LGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHE 242

Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
           DA KAV+ +NGK+ + ++ YVG+AQKK ER+ ELK +FEQ  ++ + ++QG+NLY+KNL 
Sbjct: 243 DAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLD 302

Query: 321 DSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSK 380
           D IDDE+L++ FS FGTITS KVM +  G SKG GFV FS+PEEA++A+ EMNG+++ +K
Sbjct: 303 DGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATK 361

Query: 381 PLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSG 426
           PLYVA+AQRKEER+A L  Q+ Q          P   P  P  PSG
Sbjct: 362 PLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSG 407



 Score =  193 bits (491), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 109/298 (36%), Positives = 173/298 (58%), Gaps = 16/298 (5%)

Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFEN 167
           +PS       ++++ +L   +    L++ FS  G ILS ++  D  + +S G+ +V F+ 
Sbjct: 2   NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61

Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
              A+ A+D +N  +I  K V +       +R+    K+   N+F+KNLD+S  ++ L  
Sbjct: 62  PADAERALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYD 117

Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
            F  +G I S  V+ D +G SK +GFV+FE  + A +A+E +NG   +DR+ +VG+ + +
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 176

Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
            ERE EL  + ++            N+YIKN G+ +DDE+LK+LF +FG   S KVM D 
Sbjct: 177 KEREAELGARAKEFT----------NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE 226

Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
           SG SKG GFV+F   E+A +A+ EMNGK +  K +YV  AQ+K ER+  L+ +F QM+
Sbjct: 227 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 284



 Score = 83.2 bits (204), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 39/81 (48%), Positives = 63/81 (77%), Gaps = 2/81 (2%)

Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
           P+TA  + LA+A P++Q+ +LGE L+PL++ +    A K+TGMLLE+D +E+LH+LESPE
Sbjct: 544 PLTA--SMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPE 601

Query: 555 ALKAKVAEAMEVLRSVAQQQA 575
           +L++KV EA+ VL++   ++A
Sbjct: 602 SLRSKVDEAVAVLQAHQAKEA 622


>sp|P61286|PABP1_BOVIN Polyadenylate-binding protein 1 OS=Bos taurus GN=PABPC1 PE=2 SV=1
          Length = 636

 Score =  469 bits (1207), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 229/406 (56%), Positives = 298/406 (73%), Gaps = 4/406 (0%)

Query: 23  SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
           S   +   SLYVGDL  +VT++ LY+ FS  G +LS+RVCRD+ TRRSLGY YVN+  PA
Sbjct: 4   SAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPA 63

Query: 83  DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
           DA RALD +NF  +  K +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FG
Sbjct: 64  DAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFG 123

Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 202
           NILSCK+  D +G SKG+GFV FE +E+A+ AI+K+NGML+ND++VFVG F  ++ERE  
Sbjct: 124 NILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182

Query: 203 --AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
             A   +F NV++KN  E   DE LK +FG++G   S  VM D  GKSK FGFV+FE  +
Sbjct: 183 LGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHE 242

Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
           DA KAV+ +NGK+ + ++ YVG+AQKK ER+ ELK +FEQ  ++ + ++QG+NLY+KNL 
Sbjct: 243 DAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLD 302

Query: 321 DSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSK 380
           D IDDE+L++ FS FGTITS KVM +  G SKG GFV FS+PEEA++A+ EMNG+++ +K
Sbjct: 303 DGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATK 361

Query: 381 PLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSG 426
           PLYVA+AQRKEER+A L  Q+ Q          P   P  P  PSG
Sbjct: 362 PLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSG 407



 Score =  193 bits (491), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 109/298 (36%), Positives = 173/298 (58%), Gaps = 16/298 (5%)

Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFEN 167
           +PS       ++++ +L   +    L++ FS  G ILS ++  D  + +S G+ +V F+ 
Sbjct: 2   NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61

Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
              A+ A+D +N  +I  K V +       +R+    K+   N+F+KNLD+S  ++ L  
Sbjct: 62  PADAERALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYD 117

Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
            F  +G I S  V+ D +G SK +GFV+FE  + A +A+E +NG   +DR+ +VG+ + +
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 176

Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
            ERE EL  + ++            N+YIKN G+ +DDE+LK+LF +FG   S KVM D 
Sbjct: 177 KEREAELGARAKEFT----------NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE 226

Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
           SG SKG GFV+F   E+A +A+ EMNGK +  K +YV  AQ+K ER+  L+ +F QM+
Sbjct: 227 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 284



 Score = 83.2 bits (204), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 39/81 (48%), Positives = 63/81 (77%), Gaps = 2/81 (2%)

Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
           P+TA  + LA+A P++Q+ +LGE L+PL++ +    A K+TGMLLE+D +E+LH+LESPE
Sbjct: 544 PLTA--SMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPE 601

Query: 555 ALKAKVAEAMEVLRSVAQQQA 575
           +L++KV EA+ VL++   ++A
Sbjct: 602 SLRSKVDEAVAVLQAHQAKEA 622


>sp|Q5R8F7|PABP1_PONAB Polyadenylate-binding protein 1 OS=Pongo abelii GN=PABPC1 PE=2 SV=1
          Length = 636

 Score =  467 bits (1202), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 228/406 (56%), Positives = 297/406 (73%), Gaps = 4/406 (0%)

Query: 23  SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
           S   +   SLYVGDL  + T++ LY+ FS  G +LS+RVCRD+ TRRSLGY YVN+  PA
Sbjct: 4   SAPSYPMASLYVGDLHPDATEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPA 63

Query: 83  DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
           DA RALD +NF  +  K +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FG
Sbjct: 64  DAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFG 123

Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 202
           NILSCK+  D +G SKG+GFV FE +E+A+ AI+K+NGML+ND++VFVG F  ++ERE  
Sbjct: 124 NILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182

Query: 203 --AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
             A   +F NV++KN  E   DE LK +FG++G   S  VM D  GKSK FGFV+FE  +
Sbjct: 183 LGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHE 242

Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
           DA KAV+ +NGK+ + ++ YVG+AQKK ER+ ELK +FEQ  ++ + ++QG+NLY+KNL 
Sbjct: 243 DAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLD 302

Query: 321 DSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSK 380
           D IDDE+L++ FS FGTITS KVM +  G SKG GFV FS+PEEA++A+ EMNG+++ +K
Sbjct: 303 DGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATK 361

Query: 381 PLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSG 426
           PLYVA+AQRKEER+A L  Q+ Q          P   P  P  PSG
Sbjct: 362 PLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSG 407



 Score =  191 bits (486), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 109/298 (36%), Positives = 172/298 (57%), Gaps = 16/298 (5%)

Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFEN 167
           +PS       ++++ +L        L++ FS  G ILS ++  D  + +S G+ +V F+ 
Sbjct: 2   NPSAPSYPMASLYVGDLHPDATEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61

Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
              A+ A+D +N  +I  K V +       +R+    K+   N+F+KNLD+S  ++ L  
Sbjct: 62  PADAERALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYD 117

Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
            F  +G I S  V+ D +G SK +GFV+FE  + A +A+E +NG   +DR+ +VG+ + +
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 176

Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
            ERE EL  + ++            N+YIKN G+ +DDE+LK+LF +FG   S KVM D 
Sbjct: 177 KEREAELGARAKEFT----------NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE 226

Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
           SG SKG GFV+F   E+A +A+ EMNGK +  K +YV  AQ+K ER+  L+ +F QM+
Sbjct: 227 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 284



 Score = 83.2 bits (204), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 39/81 (48%), Positives = 63/81 (77%), Gaps = 2/81 (2%)

Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
           P+TA  + LA+A P++Q+ +LGE L+PL++ +    A K+TGMLLE+D +E+LH+LESPE
Sbjct: 544 PLTA--SMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPE 601

Query: 555 ALKAKVAEAMEVLRSVAQQQA 575
           +L++KV EA+ VL++   ++A
Sbjct: 602 SLRSKVDEAVAVLQAHQAKEA 622


>sp|Q6IP09|PABPB_XENLA Polyadenylate-binding protein 1-B OS=Xenopus laevis GN=pabpc1-b
           PE=2 SV=1
          Length = 633

 Score =  466 bits (1200), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 243/488 (49%), Positives = 323/488 (66%), Gaps = 36/488 (7%)

Query: 23  SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
           S   +   SLYVGDL  +VT++ LY+ FS  G +LS+RVCRD+ TRRSLGY YVN+  PA
Sbjct: 4   SAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPA 63

Query: 83  DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
           DA RALD +NF  +  K +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FG
Sbjct: 64  DAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFG 123

Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 202
           NILSCK+  D +G SKG+GFV FE +E+A+ AIDK+NGML+ND++VFVG F  ++ERE  
Sbjct: 124 NILSCKVVCDENG-SKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSRKEREAE 182

Query: 203 --AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
             A   +F NV++KN  E   DE LK+ FG+YG   S  VM D  GKS+ FGFV+FE  +
Sbjct: 183 LGARAKEFTNVYIKNFGEDMDDERLKEWFGQYGAALSVKVMTDDHGKSRGFGFVSFERHE 242

Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
           DA KAV+ +NGK  + +  +VG+AQKK ER+ ELK +FEQ  ++ + ++QG+NLY+KNL 
Sbjct: 243 DAQKAVDDMNGKDLNGKAIFVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLD 302

Query: 321 DSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSK 380
           D IDDE+L++ F+ FG+ITS KVM +  G SKG GFV FS+PEEA++A+ EMNG+++ +K
Sbjct: 303 DGIDDERLRKEFTPFGSITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATK 361

Query: 381 PLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAI 440
           PLYVA+AQRKEER+A L  Q+ Q       P+  P +  Y P PS     +     PPA 
Sbjct: 362 PLYVALAQRKEERQAHLTNQYMQRMASVRVPN--PVINPYQPPPSS----YFMAAIPPA- 414

Query: 441 IPPQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALS 500
                  +  A  YP G+  Q  P                   PR  A   +P P   ++
Sbjct: 415 -------QNRAAYYPPGQIAQLRP------------------SPRWTAQGARPHPFQNMA 449

Query: 501 TALANASP 508
            A+  ++P
Sbjct: 450 GAIRPSAP 457



 Score =  185 bits (469), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 103/298 (34%), Positives = 171/298 (57%), Gaps = 16/298 (5%)

Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFEN 167
           +PS       ++++ +L   +    L++ FS  G ILS ++  D  + +S G+ +V F+ 
Sbjct: 2   NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61

Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
              A+ A+D +N  +I  K V +       +R+    K+   N+F+KNLD+S  ++ L  
Sbjct: 62  PADAERALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYD 117

Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
            F  +G I S  V+ D +G SK +GFV+FE  + A +A++ +NG   +DR+ +VG+ + +
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSR 176

Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
            ERE EL  + ++            N+YIKN G+ +DDE+LKE F ++G   S KVM D 
Sbjct: 177 KEREAELGARAKEFT----------NVYIKNFGEDMDDERLKEWFGQYGAALSVKVMTDD 226

Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
            G S+G GFV+F   E+A +A+ +MNGK +  K ++V  AQ+K ER+  L+ +F QM+
Sbjct: 227 HGKSRGFGFVSFERHEDAQKAVDDMNGKDLNGKAIFVGRAQKKVERQTELKRKFEQMK 284



 Score = 83.2 bits (204), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 42/92 (45%), Positives = 66/92 (71%), Gaps = 5/92 (5%)

Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
           P+TA  + LA A P++Q+ +LGE L+PL++ +    A K+TGMLLE+D +E+LH+LESPE
Sbjct: 542 PLTA--SMLAAAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPE 599

Query: 555 ALKAKVAEAMEVLRSVAQQQANNPADQLASLS 586
           +L++KV EA+ VL++    QA   A ++ S +
Sbjct: 600 SLRSKVDEAVAVLQA---HQAKEAAQKVVSAT 628


>sp|Q13310|PABP4_HUMAN Polyadenylate-binding protein 4 OS=Homo sapiens GN=PABPC4 PE=1 SV=1
          Length = 644

 Score =  466 bits (1198), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 236/425 (55%), Positives = 307/425 (72%), Gaps = 26/425 (6%)

Query: 22  ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANP 81
           A+ + +   SLYVGDL  +VT++ LY+ FS  G VLS+RVCRD+ TRRSLGY YVN+  P
Sbjct: 3   AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62

Query: 82  ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSF 141
           ADA RALD +NF  +  K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+F
Sbjct: 63  ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122

Query: 142 GNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
           GNILSCK+  D +G SKG+ FV FE +E+A  AI+K+NGML+ND++VFVG F  ++ERE 
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181

Query: 202 -VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENA 259
            +  K K F NV++KN  E   DE LK++F ++G   S  VMRD +GKSK FGFV++E  
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKH 241

Query: 260 DDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNL 319
           +DA KAVE +NGK+   +  +VG+AQKK ER+ ELK +FEQ  +E + ++QG+NLYIKNL
Sbjct: 242 EDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNL 301

Query: 320 GDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVS 379
            D+IDDEKL++ FS FG+ITS KVM +  G SKG GFV FS+PEEA++A+ EMNG+++ S
Sbjct: 302 DDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360

Query: 380 KPLYVAVAQRKEERRARLQAQF----------------SQMRPVAMG---PSVPP---RM 417
           KPLYVA+AQRKEER+A L  Q+                +Q +P A G   P+VP    R 
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP 420

Query: 418 PMYPP 422
           P Y P
Sbjct: 421 PYYTP 425



 Score = 83.6 bits (205), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 38/75 (50%), Positives = 60/75 (80%), Gaps = 2/75 (2%)

Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
           P+TA  + LA A P++Q+ +LGE L+PL++ +  + A K+TGMLLE+D +E+LH+LESPE
Sbjct: 553 PLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPE 610

Query: 555 ALKAKVAEAMEVLRS 569
           +L++KV EA+ VL++
Sbjct: 611 SLRSKVDEAVAVLQA 625


>sp|A5DW14|PABP_LODEL Polyadenylate-binding protein, cytoplasmic and nuclear
           OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS
           2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) GN=PAB1 PE=3
           SV=1
          Length = 661

 Score =  465 bits (1197), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 264/605 (43%), Positives = 371/605 (61%), Gaps = 52/605 (8%)

Query: 17  GVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYV 76
           G ++G + N   + SLYVG+L+ +V ++ L+++FS +GQV S+RVCRD  +++SLGY YV
Sbjct: 57  GESSGIAEN---SASLYVGELNPSVNEATLFEIFSPIGQVASIRVCRDAVSKKSLGYAYV 113

Query: 77  NYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHD 136
           NY    D  +A++ LN+TP+  +  RIM+S RDPS R+SG GNIFIKNL  +ID+KALHD
Sbjct: 114 NYHKLEDGEKAIEELNYTPVEGRPCRIMWSQRDPSARRSGDGNIFIKNLHPAIDNKALHD 173

Query: 137 TFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRK 196
           TFS+FG ILS K+ATD  GQSK FGFV +E +E+AQ AI+ +NGML+ND++V+VG  + K
Sbjct: 174 TFSAFGKILSVKVATDDLGQSKCFGFVHYETEEAAQAAIESVNGMLLNDREVYVGKHVSK 233

Query: 197 QERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFV 254
           ++RE+    +K  + N++VKN+D + T+++ +++F  +G ITS  + +D +GKSK FGFV
Sbjct: 234 KDRESKLEEMKANYTNIYVKNIDLAYTEKEFEELFAPFGKITSIYLEKDAEGKSKGFGFV 293

Query: 255 NFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNL 314
           NFE  + AAKAVE LN K+ + ++ YVG+AQKK ER +ELK Q+E    E + K+QG+NL
Sbjct: 294 NFEEHEAAAKAVEELNDKEINGQKIYVGRAQKKRERTEELKKQYEAVRLEKLSKYQGVNL 353

Query: 315 YIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNG 374
           ++KNL + ID EKL+E F  FGTITS KVM D +G SKG GFV FSTPEEA++A+ EMN 
Sbjct: 354 FVKNLDEQIDSEKLEEEFKPFGTITSSKVMVDDAGKSKGFGFVCFSTPEEATKAITEMNQ 413

Query: 375 KMIVSKPLYVAVAQRKEERRARLQAQFS-----QMRPVAMGPSVPPR-MPMYPPGPSGLG 428
           +M+  KPLYVA+AQRK+ RR++L+ Q       +M+  A    +P + MP     P   G
Sbjct: 414 RMVNGKPLYVALAQRKDVRRSQLEQQIQARNQMRMQNAAAAGGLPGQFMP-----PMFYG 468

Query: 429 QQFLY-----GQAPPAIIPPQMPPRGHAYRYPL-----GRNMQDFPF--------DMGAG 470
           QQ  +     G AP     PQM  RG    +P      G N Q  P         D    
Sbjct: 469 QQGFFPPNGRGNAPFPGPNPQMMMRGRGQPFPEQWPRPGPNGQPVPVYGMPPQFQDFNGQ 528

Query: 471 SMLPVPVDMGAG------------IPRRDASVGQPMPITALSTALANASPEQQRTLLGES 518
           +M P                     P R A  G  +P   L+  +ANA  E Q+ +LGE 
Sbjct: 529 NMRPQQQQQQQQQQQQQQQQQRGYYPNRPA--GGNVPAKDLAALIANAPLEAQKRILGEE 586

Query: 519 LYPLV----EQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQ 574
           LY  +    +  E +AA K+TGM+L ++  E+L LL+  E       EA+         +
Sbjct: 587 LYQRIVATGKAQEPEAAGKITGMMLGLENQEILDLLDDEELFNNHFEEALNAFEEYKNSE 646

Query: 575 ANNPA 579
             N A
Sbjct: 647 GANAA 651


>sp|P20965|PABPA_XENLA Polyadenylate-binding protein 1-A OS=Xenopus laevis GN=pabpc1-a
           PE=1 SV=3
          Length = 633

 Score =  465 bits (1197), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 248/513 (48%), Positives = 332/513 (64%), Gaps = 39/513 (7%)

Query: 23  SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
           S   +   SLYVGDL  +VT++ LY+ FS  G +LS+RVCRD+ TRRSLGY YVN+  PA
Sbjct: 4   SAPSYPMASLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPA 63

Query: 83  DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
           DA RALD +NF  +  + +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FG
Sbjct: 64  DAERALDTMNFDVIKGRPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFG 123

Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 202
           NILSCK+  D +G SKG+GFV FE +E+A+ AIDK+NGML+ND++VFVG F  ++ERE  
Sbjct: 124 NILSCKVVCDENG-SKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSRKEREAE 182

Query: 203 --AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
             A   +F NV++KN  +   DE LK++FG+YG   S  VM D +GKSK FGFV+FE  +
Sbjct: 183 LGARAKEFTNVYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDDNGKSKGFGFVSFERHE 242

Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
           DA KAV+ +NGK  + +  +VG+AQKK ER+ ELK +FEQ  ++ + ++QG+NLY+KNL 
Sbjct: 243 DAQKAVDEMNGKDMNGKSMFVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLD 302

Query: 321 DSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSK 380
           D IDDE+L++ F  FGTITS KVM +  G SKG GFV FS+PEEA++A+ EMNG+++ +K
Sbjct: 303 DGIDDERLRKEFLPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATK 361

Query: 381 PLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAI 440
           PLYVA+AQRKEER+A L  Q+ Q       P+  P +  Y P PS     +     PPA 
Sbjct: 362 PLYVALAQRKEERQAHLTNQYMQRMASVRVPN--PVINPYQPPPSS----YFMAAIPPA- 414

Query: 441 IPPQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALS 500
                  +  A  YP G+  Q  P                   PR  A   +P P   + 
Sbjct: 415 -------QNRAAYYPPGQIAQLRP------------------SPRWTAQGARPHPFQNMP 449

Query: 501 TALANASPEQQRTLLGESLYPLVEQLERDAAAK 533
            A+   +P   R     ++ P   Q+ R  +A+
Sbjct: 450 GAIRPTAP---RPPTFSTMRPASNQVPRVMSAQ 479



 Score =  187 bits (474), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 104/298 (34%), Positives = 174/298 (58%), Gaps = 16/298 (5%)

Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFEN 167
           +PS       ++++ +L + +    L++ FS  G ILS ++  D  + +S G+ +V F+ 
Sbjct: 2   NPSAPSYPMASLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61

Query: 168 KESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKK 227
              A+ A+D +N  +I  + V +       +R+    K+   N+F+KNLD+S  ++ L  
Sbjct: 62  PADAERALDTMNFDVIKGRPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYD 117

Query: 228 IFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKK 287
            F  +G I S  V+ D +G SK +GFV+FE  + A +A++ +NG   +DR+ +VG+ + +
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSR 176

Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
            ERE EL  + ++            N+YIKN GD ++DE+LKE+F ++G   S KVM D 
Sbjct: 177 KEREAELGARAKEF----------TNVYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDD 226

Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
           +G SKG GFV+F   E+A +A+ EMNGK +  K ++V  AQ+K ER+  L+ +F QM+
Sbjct: 227 NGKSKGFGFVSFERHEDAQKAVDEMNGKDMNGKSMFVGRAQKKVERQTELKRKFEQMK 284



 Score = 82.4 bits (202), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 39/81 (48%), Positives = 62/81 (76%), Gaps = 2/81 (2%)

Query: 495 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPE 554
           P+TA  + LA A P++Q+ +LGE L+PL++ +    A K+TGMLLE+D +E+LH+LESPE
Sbjct: 542 PLTA--SMLAAAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPE 599

Query: 555 ALKAKVAEAMEVLRSVAQQQA 575
           +L++KV EA+ VL++   ++A
Sbjct: 600 SLRSKVDEAVAVLQAHQAKEA 620


>sp|A3LXL0|PABP_PICST Polyadenylate-binding protein, cytoplasmic and nuclear
           OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS
           6054 / NBRC 10063 / NRRL Y-11545) GN=PAB1 PE=3 SV=1
          Length = 632

 Score =  465 bits (1196), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 265/572 (46%), Positives = 368/572 (64%), Gaps = 51/572 (8%)

Query: 29  TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
           T SLYVG+L+ +V ++ L+++FS +GQV S+RVCRD  +++SLGY YVNY    D  +A+
Sbjct: 51  TASLYVGELNTSVNEATLFEIFSPIGQVSSIRVCRDAVSKKSLGYAYVNYHKMEDGEKAI 110

Query: 89  DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
           + LN++P+  +  RIM+S RDPS R+SG GNIFIKNL  +ID+KALHDTFS+FG ILSCK
Sbjct: 111 EELNYSPIEGRPCRIMWSQRDPSARRSGDGNIFIKNLHPAIDNKALHDTFSTFGKILSCK 170

Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKT 206
           +ATD  GQSK FGFV +E  E+A+ AI+ +NGML+ND++VFVG  + K++RE+    IK 
Sbjct: 171 VATDDMGQSKCFGFVHYETAEAAEAAIENVNGMLLNDREVFVGKHISKKDRESKFEEIKA 230

Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
            F N++VKN+D   ++EDLKK+F  YG ITS  + +D +GKSK FGFVN+E  + A KAV
Sbjct: 231 NFTNIYVKNIDLEYSEEDLKKLFTPYGAITSIYLEKDAEGKSKGFGFVNYEGHEAAVKAV 290

Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
           E LN K+ + ++ YVG+AQKK ER +ELK Q+E    E + K+QG+NL+IKNL D+ID E
Sbjct: 291 EELNDKEINGQKIYVGRAQKKRERMEELKKQYENTRLEKLSKYQGVNLFIKNLDDTIDSE 350

Query: 327 KLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 386
           KL+E F  FGTITS +VM D +G SKG GFV FS+PEEA++A+ EMN +M   KPLYVA+
Sbjct: 351 KLEEEFKPFGTITSARVMVDETGKSKGFGFVCFSSPEEATKAITEMNQRMFFGKPLYVAL 410

Query: 387 AQRKEERRARLQAQFS-----QMRPVAMGPSVPPRM--PMYPPGPSGLGQQFLY-----G 434
           AQRK+ RR++L+ Q       +M+  A    +P +   PM+       GQQ  +     G
Sbjct: 411 AQRKDVRRSQLEQQIQARNQMRMQNAAATGGIPGQFIPPMF------YGQQGFFPPNGRG 464

Query: 435 QAP-PAIIPPQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPV---------DM-GAGI 483
            AP P   P  +  RG  +  P     + +P     G   PVPV         D  G  I
Sbjct: 465 NAPFPGPNPQMIMRRGQPFGGP-----EQWPRPGPNGQ--PVPVYGIPPQAYSDFNGQNI 517

Query: 484 -------PRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLV----EQLERDAAA 532
                  P R+ + G+      L+  +A+A P+QQ+ +LGE LYP +    +  E +AA 
Sbjct: 518 RQQRGYYPNRNQNKGRQQ--RDLAAIIASAPPDQQKRILGEELYPKIVATGKAQEPEAAG 575

Query: 533 KVTGMLLEMDQTEVLHLLESPEALKAKVAEAM 564
           K+TGM+L++D  E+L LLE  E       +A+
Sbjct: 576 KITGMMLDLDNQEILALLEDDELFTNHFEDAL 607


>sp|Q6CDH3|PABP_YARLI Polyadenylate-binding protein, cytoplasmic and nuclear OS=Yarrowia
           lipolytica (strain CLIB 122 / E 150) GN=PAB1 PE=3 SV=1
          Length = 629

 Score =  452 bits (1164), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 260/589 (44%), Positives = 365/589 (61%), Gaps = 54/589 (9%)

Query: 21  GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYAN 80
           G+  +Q    SLYVG+LD +VT++ L+++F+ +G V SVRVCRD  TRRSLGY YVN+ N
Sbjct: 37  GSKEDQGDNASLYVGELDPSVTEAMLFEIFNPIGPVTSVRVCRDAITRRSLGYAYVNFHN 96

Query: 81  PADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSS 140
            AD  RAL+ LN++P+  +  RIM+S RDP++RK+G GNI+IKNLD +ID+KALHDTFS+
Sbjct: 97  QADGIRALEELNYSPIKERPCRIMWSQRDPALRKTGAGNIYIKNLDPAIDNKALHDTFSA 156

Query: 141 FGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER- 199
           FG ILSCKIATD  G S+GFGFV +E+ ESA++AI  +NGML+NDK+VFVG  + K +R 
Sbjct: 157 FGQILSCKIATDEFGNSRGFGFVHYESAESAESAIQHVNGMLLNDKKVFVGPHVPKSDRM 216

Query: 200 -ETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFEN 258
                 K  F NVF+KNL    T+ + +++  ++G  +S  +  + +GK   FGFV+++ 
Sbjct: 217 QSFEEQKNSFTNVFIKNLGTEITEAEFEELVNKFGETSSVHLSTNDEGKPTGFGFVDYKE 276

Query: 259 ADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKN 318
            D A KA++ L+  +F   + + G+A+KK ER  EL+ Q+E +  E ++K+QG+NLYIKN
Sbjct: 277 HDVAVKAIDGLSETEFKGNKLFAGRAKKKYERADELRKQYEASRLEKLNKYQGVNLYIKN 336

Query: 319 LGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIV 378
           L D+IDD+KL+  F+  GTITS KVM D +G SKG GFV +S+PEEA++A+ EMN +++ 
Sbjct: 337 LDDTIDDDKLRAEFAPHGTITSAKVMVDEAGKSKGFGFVCYSSPEEATKAVTEMNHRLVA 396

Query: 379 SKPLYVAVAQRKEERRARLQAQF---SQMR-----------------PVAMGPSVPPRMP 418
            KPLYV +AQRK+ RR++LQ Q    +QMR                 P    P  P  M 
Sbjct: 397 GKPLYVVLAQRKDVRRSQLQQQIQAKNQMRLQQQAAAGGLPGQYMGNPGVFYPGQPGFM- 455

Query: 419 MYPPGPSGL--GQQFLYGQAPPAIIPPQMPPRGHAYRYPLGRNMQDFP---FDMGA---- 469
             PPG  G+  G        PP     Q PPRG     P G NM   P   +  G     
Sbjct: 456 --PPGRGGMPFGANPQMMMRPPMPPQNQFPPRG----VPGGPNMYGAPPQGYQQGGFPPQ 509

Query: 470 GSML---------PVPVDMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLY 520
           G M          P P     G PRR    G+     ++S AL NA  EQ + L+GE+LY
Sbjct: 510 GPMRGGQPPRSGQPGPQGQFRGAPRRKD--GESRVADSISNALENAPEEQHKQLVGEALY 567

Query: 521 PLV---EQLERDA--AAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAM 564
           P V   + ++ +A  A K+TGMLLEM   E+L +++  E L+A++ +A+
Sbjct: 568 PKVLAEKAIDGNAEFAGKITGMLLEMPIKEILEVIDDEEGLQAQINDAI 616



 Score = 46.2 bits (108), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 52/103 (50%), Gaps = 3/103 (2%)

Query: 288 SEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP 347
           +E E + +   E+  KE  D+    +LY+  L  S+ +  L E+F+  G +TS +V RD 
Sbjct: 24  AEGEAKTESSEEKGSKE--DQGDNASLYVGELDPSVTEAMLFEIFNPIGPVTSVRVCRDA 81

Query: 348 -SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQR 389
            +  S G  +V F    +  RAL E+N   I  +P  +  +QR
Sbjct: 82  ITRRSLGYAYVNFHNQADGIRALEELNYSPIKERPCRIMWSQR 124


>sp|Q6BI95|PABP_DEBHA Polyadenylate-binding protein, cytoplasmic and nuclear
           OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 /
           JCM 1990 / NBRC 0083 / IGC 2968) GN=PAB1 PE=3 SV=2
          Length = 627

 Score =  452 bits (1162), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 258/580 (44%), Positives = 368/580 (63%), Gaps = 31/580 (5%)

Query: 13  SGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLG 72
           SG    AA ++     + SLYVG+L+ +V ++ L+++FS +GQV S+RVCRD  T++SLG
Sbjct: 34  SGETEEAADSAQVSDTSASLYVGELNPSVNEALLFEIFSPIGQVASIRVCRDAVTKKSLG 93

Query: 73  YGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHK 132
           Y YVN+    D  +A++ LN++ +  +  RIM+S RDPS+R++G GNIFIKNL  +ID+K
Sbjct: 94  YAYVNFHKFEDGEKAIEDLNYSLIEGRPCRIMWSQRDPSLRRNGDGNIFIKNLHPAIDNK 153

Query: 133 ALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGH 192
           ALHDTF++FG ILSCK+ATD  G SK FGFV +E  E+A+ AI+ +NGML+ND++V+VG 
Sbjct: 154 ALHDTFTAFGKILSCKVATDDMGISKCFGFVHYETAEAAEAAIENVNGMLLNDREVYVGK 213

Query: 193 FLRKQERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKC 250
            + K++RE+    +K  F NV+ KN+D   ++E+ KK+F  YG ITS  + +D +GKSK 
Sbjct: 214 HISKKDRESKFEEMKANFTNVYAKNIDLDFSEEEFKKLFEAYGKITSIYLEKDHEGKSKG 273

Query: 251 FGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQ 310
           FGFVNFEN + A KAV+ LN K+ + ++ YVG+AQKK ER +ELK Q+E    E + K+Q
Sbjct: 274 FGFVNFENHESAVKAVDELNDKEINGQKIYVGRAQKKRERLEELKKQYENTRLEKLSKYQ 333

Query: 311 GLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALA 370
           G+NL+IKNL D+ID EKL+E F  FG+ITS +VM D +G SKG GFV FS+PEEA++A+ 
Sbjct: 334 GVNLFIKNLDDTIDSEKLEEEFKPFGSITSARVMVDETGKSKGFGFVCFSSPEEATKAIT 393

Query: 371 EMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAM----------GPSVPPRMPMY 420
           EMN +MI  KPLYVA+AQRK+ RR++L+ Q      + M          G  +PP     
Sbjct: 394 EMNQRMIYGKPLYVALAQRKDVRRSQLEQQIQARNQMRMQNAAATGGIPGQFIPPMFYGQ 453

Query: 421 PPG---PSGLGQQFLYGQAPPAIIPP-QMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVP 476
            PG   P+G G     G  P  ++P  Q+PP    +  P G N Q  P   G   +    
Sbjct: 454 QPGFFPPNGRGNGPFPGPNPQMMMPRGQIPPPQGQWPRP-GPNGQPVPV-YGMPPVYGGD 511

Query: 477 VDMGAG--------IPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLV----E 524
            + GA          P R+ +  +      L+  +ANA  +QQ+ +LGE LYP +    +
Sbjct: 512 FNNGANGGRQQRGYYPNRNQNQ-KGRQQKDLAAIIANAPADQQKRILGEELYPKIVSTGK 570

Query: 525 QLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAM 564
             E +AA K+TGM+L++D  E+L LLE  E       +A+
Sbjct: 571 AQEPEAAGKITGMMLDLDNEEILALLEDDELFNTHFEDAL 610



 Score = 49.3 bits (116), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 1/102 (0%)

Query: 289 EREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP- 347
           E EQ   G+ E+A           +LY+  L  S+++  L E+FS  G + S +V RD  
Sbjct: 28  ETEQTASGETEEAADSAQVSDTSASLYVGELNPSVNEALLFEIFSPIGQVASIRVCRDAV 87

Query: 348 SGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQR 389
           +  S G  +V F   E+  +A+ ++N  +I  +P  +  +QR
Sbjct: 88  TKKSLGYAYVNFHKFEDGEKAIEDLNYSLIEGRPCRIMWSQR 129


>sp|Q74ZS6|PABP_ASHGO Polyadenylate-binding protein, cytoplasmic and nuclear OS=Ashbya
           gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 /
           NRRL Y-1056) GN=PAB1 PE=3 SV=1
          Length = 585

 Score =  451 bits (1160), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 254/549 (46%), Positives = 356/549 (64%), Gaps = 45/549 (8%)

Query: 31  SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
           SLYVG+L+  V+++ LYD+FS +G V S+RVCRD  T  SLGY YVN+ +     +A++ 
Sbjct: 39  SLYVGELEPTVSEALLYDIFSPIGSVSSIRVCRDAITNTSLGYAYVNFHDHEAGPKAIEQ 98

Query: 91  LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
           LN+T +  K  RIM+S RDPS+RK G+GNI+IKNL  +ID+K+LH+TFS+FGNILSCK+A
Sbjct: 99  LNYTLIKGKPCRIMWSQRDPSLRKKGSGNIYIKNLHPAIDNKSLHETFSTFGNILSCKVA 158

Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTKF 208
           TD +G S+GFGFV FEN+  A++AI+ ++GML+ND++V+V   + K++R++    +K KF
Sbjct: 159 TDENGVSRGFGFVHFENESDARDAIEAVDGMLMNDQEVYVALHVSKKDRQSKLEEVKAKF 218

Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
            NV+VKN+D+ T+ E+ +++FG+YG ITSAV+ +D +GK + FGFVNFE+   AAKAV+ 
Sbjct: 219 TNVYVKNIDQETSQEEFEELFGKYGKITSAVLEKDSEGKLRGFGFVNFEDHAAAAKAVDE 278

Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
           LN  +F  ++ YVG+AQKK ER QELK Q+E A  E + K+QG+NL++KNL DSIDDEKL
Sbjct: 279 LNELEFKGQKLYVGRAQKKYERLQELKKQYEAARLEKLAKYQGVNLFVKNLDDSIDDEKL 338

Query: 329 KELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
           KE F+ FGTITS KVMRD +G S+G GFV FSTPEEA++A+ E N +++  KPLYVA+AQ
Sbjct: 339 KEEFAPFGTITSAKVMRDETGNSRGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQ 398

Query: 389 RKEERRARLQAQF---SQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPPQM 445
           RKE RR +L  Q    +QMR                   +GL  QF+    PP +    +
Sbjct: 399 RKEVRRNQLAQQIQARNQMR-------FQHANAAAAAAVAGLPGQFM----PPPMYYGGI 447

Query: 446 PPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITA------- 498
           PPR               PF      M  +P + GA  P++    G+P P+         
Sbjct: 448 PPR--------------VPFQGPNPQMAGMPKN-GAMPPQQ---FGRPGPMYGGFAPQGQ 489

Query: 499 --LSTALANASPEQQRTLLGESLYPLVEQLERD--AAAKVTGMLLEMDQTEVLHLLESPE 554
              +        ++QR  LGE LY  V    +D  AA K+TGM+L++   +V+ LLE+ E
Sbjct: 490 FPRNGQQQQFYQQKQRQALGEQLYQKVFAKTQDDEAAGKITGMILDLPPQQVIQLLENDE 549

Query: 555 ALKAKVAEA 563
            L+    EA
Sbjct: 550 LLEQHFQEA 558



 Score = 96.7 bits (239), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 58/186 (31%), Positives = 96/186 (51%), Gaps = 17/186 (9%)

Query: 30  TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
           T++YV ++D   +  +  +LF + G++ S  + +D S  +  G+G+VN+ + A AA+A+D
Sbjct: 219 TNVYVKNIDQETSQEEFEELFGKYGKITSAVLEKD-SEGKLRGFGFVNFEDHAAAAKAVD 277

Query: 90  VLNFTPLNNKSIRIMYSH----------------RDPSIRKSGTGNIFIKNLDKSIDHKA 133
            LN      + + +  +                 R   + K    N+F+KNLD SID + 
Sbjct: 278 ELNELEFKGQKLYVGRAQKKYERLQELKKQYEAARLEKLAKYQGVNLFVKNLDDSIDDEK 337

Query: 134 LHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHF 193
           L + F+ FG I S K+  D +G S+GFGFV F   E A  AI + N  ++  K ++V   
Sbjct: 338 LKEEFAPFGTITSAKVMRDETGNSRGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIA 397

Query: 194 LRKQER 199
            RK+ R
Sbjct: 398 QRKEVR 403



 Score = 48.1 bits (113), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 1/87 (1%)

Query: 311 GLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP-SGISKGSGFVAFSTPEEASRAL 369
           G +LY+  L  ++ +  L ++FS  G+++S +V RD  +  S G  +V F   E   +A+
Sbjct: 37  GASLYVGELEPTVSEALLYDIFSPIGSVSSIRVCRDAITNTSLGYAYVNFHDHEAGPKAI 96

Query: 370 AEMNGKMIVSKPLYVAVAQRKEERRAR 396
            ++N  +I  KP  +  +QR    R +
Sbjct: 97  EQLNYTLIKGKPCRIMWSQRDPSLRKK 123


>sp|Q5AI15|PABP_CANAL Polyadenylate-binding protein, cytoplasmic and nuclear OS=Candida
           albicans (strain SC5314 / ATCC MYA-2876) GN=PAB1 PE=3
           SV=1
          Length = 629

 Score =  450 bits (1157), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 260/596 (43%), Positives = 371/596 (62%), Gaps = 37/596 (6%)

Query: 17  GVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYV 76
           G ++G + N   + SLYVG+L+ +V ++ L+++FS +GQV S+RVCRD  +++SLGY YV
Sbjct: 42  GESSGVAEN---SASLYVGELNPSVNEATLFEIFSPIGQVSSIRVCRDAVSKKSLGYAYV 98

Query: 77  NYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHD 136
           NY    D  +A++ LN+ P+  +  RIM+S RDPS R+SG GNIFIKNL  +ID+KALHD
Sbjct: 99  NYHKYEDGEKAIEELNYNPIEGRPCRIMWSQRDPSARRSGDGNIFIKNLHPAIDNKALHD 158

Query: 137 TFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRK 196
           TFS+FG ILSCK+ATD  GQSK FGFV +E  E+A+ AI+ +NGML+ND++VFVG  + K
Sbjct: 159 TFSAFGKILSCKVATDEFGQSKCFGFVHYETAEAAEAAIENVNGMLLNDREVFVGKHISK 218

Query: 197 QERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFV 254
           ++RE+    +K  F N++VKN+D + ++E  +K+F  +G ITS  + +D DGKSK FGFV
Sbjct: 219 KDRESKFEEMKANFTNIYVKNIDLNYSEESFEKLFSPFGKITSIYLEKDQDGKSKGFGFV 278

Query: 255 NFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNL 314
           NFE+ + A KAVE LN K+ + ++ YVG+AQKK ER +ELK Q+E    E + K+QG+NL
Sbjct: 279 NFEDHESAVKAVEELNDKEINGQKIYVGRAQKKRERLEELKKQYEAVRLEKLAKYQGVNL 338

Query: 315 YIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNG 374
           ++KNL D+ID EKL+E F  FGTITS KVM D +G SKG GFV F+TPEEA++A+ EMN 
Sbjct: 339 FVKNLDDTIDSEKLEEEFKPFGTITSAKVMVDEAGKSKGFGFVCFTTPEEATKAITEMNT 398

Query: 375 KMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLY- 433
           +MI  KPLYVA+AQRK+ RR++L+ Q      + M  +    +P     P   GQQ  + 
Sbjct: 399 RMINGKPLYVALAQRKDVRRSQLEQQIQARNQMRMQNAAAGGLPGQFIPPMFYGQQGFFP 458

Query: 434 ----GQAPPAIIPPQMPPRGHAYRYPL-----GRNMQDFPF---------DMGAGSMLPV 475
               G AP     PQM  RG    +P      G N Q  P          D    +M P 
Sbjct: 459 PNGRGNAPYPGPNPQMMMRGRGQPFPEQWPRPGPNGQPVPVYGIPPQFQQDFNGQNMRPQ 518

Query: 476 PVDM----GAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLV----EQLE 527
                   G   P R+ +  +      L+  +++   +QQ+ +LGE LYP +    +  E
Sbjct: 519 QQQQQQPRGGYYPNRNQTSKR-----DLAAIISSVPQDQQKRILGEELYPKIVATGKAQE 573

Query: 528 RDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNPADQLA 583
            +AA K+TGM+L ++  E+L LL+  E       +A+       + +A   A++ A
Sbjct: 574 PEAAGKITGMMLGLENQEILDLLDDDELFNNHFEDALTAFEEYKKSEAAGNAEEQA 629


>sp|P04147|PABP_YEAST Polyadenylate-binding protein, cytoplasmic and nuclear
           OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
           GN=PAB1 PE=1 SV=4
          Length = 577

 Score =  447 bits (1150), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 250/561 (44%), Positives = 346/561 (61%), Gaps = 42/561 (7%)

Query: 29  TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
           + SLYVGDL+ +V+++ LYD+FS +G V S+RVCRD  T+ SLGY YVN+ +     +A+
Sbjct: 37  SASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAI 96

Query: 89  DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
           + LN+TP+  +  RIM+S RDPS+RK G+GNIFIKNL   ID+KAL+DTFS FG+ILS K
Sbjct: 97  EQLNYTPIKGRLCRIMWSQRDPSLRKKGSGNIFIKNLHPDIDNKALYDTFSVFGDILSSK 156

Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK- 207
           IATD +G+SKGFGFV FE + +A+ AID LNGML+N ++++V   L ++ER++   +TK 
Sbjct: 157 IATDENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQLEETKA 216

Query: 208 -FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
            + N++VKN++  TTDE  +++F ++G I SA + +D DGK K FGFVN+E  +DA KAV
Sbjct: 217 HYTNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKLKGFGFVNYEKHEDAVKAV 276

Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
           EALN  + +  + YVG+AQKK+ER   LK Q+E    E + K+QG+NL++KNL DS+DDE
Sbjct: 277 EALNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDE 336

Query: 327 KLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 386
           KL+E F+ +GTITS KVMR  +G SKG GFV FSTPEEA++A+ E N +++  KPLYVA+
Sbjct: 337 KLEEEFAPYGTITSAKVMRTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAI 396

Query: 387 AQRKEERRARLQAQF---SQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPP 443
           AQRK+ RR++L  Q    +QMR      +        P            GQ  P +   
Sbjct: 397 AQRKDVRRSQLAQQIQARNQMRYQQATAAAAAAAAGMP------------GQFMPPMFYG 444

Query: 444 QMPPRGHAYRYPLGRNM--------QDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMP 495
            MPPRG  +  P  + M           P     G +  VP     G PR      Q   
Sbjct: 445 VMPPRGVPFNGPNPQQMNPMGGMPKNGMPPQFRNGPVYGVPPQ--GGFPRNANDNNQ--- 499

Query: 496 ITALSTALANASPEQQRTLLGESLYPLV--EQLERDAAAKVTGMLLEMDQTEVLHLLESP 553
                        ++QR  LGE LY  V  +    +AA K+TGM+L++   EV  LLES 
Sbjct: 500 ----------FYQQKQRQALGEQLYKKVSAKTSNEEAAGKITGMILDLPPQEVFPLLESD 549

Query: 554 EALKAKVAEAMEVLRSVAQQQ 574
           E  +    EA     S  ++Q
Sbjct: 550 ELFEQHYKEASAAYESFKKEQ 570


>sp|Q6CSV3|PABP_KLULA Polyadenylate-binding protein, cytoplasmic and nuclear
           OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 /
           DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=PAB1 PE=3
           SV=1
          Length = 592

 Score =  447 bits (1149), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 249/556 (44%), Positives = 348/556 (62%), Gaps = 26/556 (4%)

Query: 29  TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
             SLYVG+LD N+T++ LYD+FS +G + S+RVCRD  T+ SLGY YVNY +     +A+
Sbjct: 49  NASLYVGELDPNITEALLYDVFSPLGPISSIRVCRDAVTKASLGYAYVNYTDYEAGKKAI 108

Query: 89  DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
             LN+  +N +  RIM+S RDP+IRK G+GNIFIKNL  +ID+KALH+TFS+FG +LSCK
Sbjct: 109 QELNYAEINGRPCRIMWSERDPAIRKKGSGNIFIKNLHPAIDNKALHETFSTFGEVLSCK 168

Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER--ETVAIKT 206
           +A D +G S+GFGFV F+ +  A++AI+ +NGML+N  +V+V   + K++R  +    K 
Sbjct: 169 VALDENGNSRGFGFVHFKEESDAKDAIEAVNGMLMNGLEVYVAMHVPKKDRISKLEEAKA 228

Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
            F N++VKN+D  TTDE+ +++F +YG I SA + +D +GK K FGFVNF + + AAKAV
Sbjct: 229 NFTNIYVKNIDVETTDEEFEQLFSQYGEIVSAALEKDAEGKPKGFGFVNFVDHNAAAKAV 288

Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
           E LNGK+F  +  YVG+AQKK ER +ELK Q+EQ   E + KFQG+NL+IKNL DSIDDE
Sbjct: 289 EELNGKEFKSQALYVGRAQKKYERAEELKKQYEQYRLEKLAKFQGVNLFIKNLDDSIDDE 348

Query: 327 KLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAV 386
           KLKE F+ +GTITS +VMRD  G SKG GFV FS+PEEA++A+ E N +++  KPLYVA+
Sbjct: 349 KLKEEFAPYGTITSARVMRDQEGNSKGFGFVCFSSPEEATKAMTEKNQQIVAGKPLYVAI 408

Query: 387 AQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPPQMP 446
           AQRK+ RR++L  Q      +        +      G        + GQ  P +    M 
Sbjct: 409 AQRKDVRRSQLAQQIQARNQIRFQQQQQQQAAAAAAG--------MPGQYMPQMFYGVMA 460

Query: 447 PRGHAYRYPLGRNMQDFPFDMGAG----SMLPVPVDMGAGIPRRDASVGQPMPITAL--S 500
           PRG    +P      + P  MGAG     M+P P    AG P      G P P       
Sbjct: 461 PRG----FPGPNPGMNGP--MGAGIPKNGMVPPPQQF-AGRPNGPMYQGMP-PQNQFPRH 512

Query: 501 TALANASPEQQRTLLGESLYPLVEQL--ERDAAAKVTGMLLEMDQTEVLHLLESPEALKA 558
                   ++QR  LGE LY  V     + +AA K+TGM+L++   +V+ LL++ E  + 
Sbjct: 513 QQQHYIQQQKQRQALGEQLYKKVSAKIDDENAAGKITGMILDLPPQQVIQLLDNDEQFEQ 572

Query: 559 KVAEAMEVLRSVAQQQ 574
           +  EA+    +  ++Q
Sbjct: 573 QFQEALAAYENFKKEQ 588


>sp|Q6FKG4|PABP_CANGA Polyadenylate-binding protein, cytoplasmic and nuclear OS=Candida
           glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC
           0622 / NRRL Y-65) GN=PAB1 PE=3 SV=1
          Length = 579

 Score =  446 bits (1148), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 257/554 (46%), Positives = 345/554 (62%), Gaps = 35/554 (6%)

Query: 28  LTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARA 87
           ++ SLYVGDLD +V+++ LYD+FS +G V S+RVCRD  T+ SLGY YVN+ +   A  A
Sbjct: 33  VSASLYVGDLDPSVSEAHLYDIFSPIGAVSSIRVCRDAITKTSLGYAYVNFNDHDAAKTA 92

Query: 88  LDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSC 147
           ++ LNFTP+  K  RIM+S RDPS+RK G GNIFIKNL   ID+KAL+DTFS FGNILS 
Sbjct: 93  IEKLNFTPIKGKLCRIMWSQRDPSLRKKGAGNIFIKNLHPDIDNKALYDTFSVFGNILSS 152

Query: 148 KIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIK 205
           K+ATD +G+SKGFG+V FE  ESA  AID LNGML+N ++++VG  L K+ERE+    +K
Sbjct: 153 KVATDETGKSKGFGYVHFEEDESASEAIDALNGMLLNGQEIYVGPHLSKKERESKFEEMK 212

Query: 206 TKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKA 265
             F NV++KN++  TTD++ +++  ++G   S V+ R  +G++K FGFVNF N +DA K 
Sbjct: 213 ANFTNVYIKNINTETTDKEFEELVAKFGKTDSVVLERTPEGENKGFGFVNFVNHEDAVKC 272

Query: 266 VEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDD 325
           VE LN  +F  +  YV +AQKK ER+QELK Q+E    E + K+QG+NL+IKNL DSIDD
Sbjct: 273 VEELNNTEFKGQPLYVNRAQKKYERQQELKKQYEATRMEKMAKYQGINLFIKNLDDSIDD 332

Query: 326 EKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVA 385
           +KL+E F+ +GTITS KVM   +G SKG GFV FSTPEEA++A+ E N +++  KPLYVA
Sbjct: 333 KKLEEEFAPYGTITSAKVMTTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVA 392

Query: 386 VAQRKEERRARLQAQF---SQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAIIP 442
           +AQRK+ RR++L  Q    +QMR      +         PG      QF+     P +  
Sbjct: 393 IAQRKDVRRSQLAQQIQARNQMRFQQASAAAAAAAAAGMPG------QFM-----PPMFY 441

Query: 443 PQMPPRGHAYRYPLGR--NMQDFPFDMGAGSMLPVPVDMGA--GIPRRDASVGQPMPITA 498
             MPPRG  +  P  +  NM   P       M P     G   G+P        P    A
Sbjct: 442 GVMPPRGVPFNGPNPQMANMGAMP----KNGMPPHQFRNGPVYGVP--------PQGGFA 489

Query: 499 LSTALANASPEQ-QRTLLGESLYPLVEQLERD--AAAKVTGMLLEMDQTEVLHLLESPEA 555
            +   AN   +Q QR  LGE LY  +     D  AA K+TGM+L++   EV+ LLE+ E 
Sbjct: 490 RNGPAANQFYQQKQRQALGEELYKRIFSRTNDEEAAGKITGMILDLPPQEVVPLLENDEL 549

Query: 556 LKAKVAEAMEVLRS 569
            +    EA     S
Sbjct: 550 FEQHFKEASAAYES 563



 Score = 42.0 bits (97), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 5/103 (4%)

Query: 295 KGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDP-SGISKG 353
           +G  E+   ETV      +LY+ +L  S+ +  L ++FS  G ++S +V RD  +  S G
Sbjct: 22  EGTNEENQSETV----SASLYVGDLDPSVSEAHLYDIFSPIGAVSSIRVCRDAITKTSLG 77

Query: 354 SGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRAR 396
             +V F+  + A  A+ ++N   I  K   +  +QR    R +
Sbjct: 78  YAYVNFNDHDAAKTAIEKLNFTPIKGKLCRIMWSQRDPSLRKK 120


>sp|A1CRM1|PABP_ASPCL Polyadenylate-binding protein, cytoplasmic and nuclear
           OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 /
           DSM 816 / NCTC 3887 / NRRL 1) GN=pab1 PE=3 SV=1
          Length = 754

 Score =  443 bits (1139), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 216/430 (50%), Positives = 291/430 (67%), Gaps = 55/430 (12%)

Query: 25  NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
           NQ  + SLYVG+LD +VT++ LY+LFS +GQV S+RVCRD  TRRSLGY YVNY N AD 
Sbjct: 46  NQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADG 105

Query: 85  ARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNI 144
            RAL+ LN+T +  K  RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++FGNI
Sbjct: 106 ERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNI 165

Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV-- 202
           LSCK+A D  G SKG+GFV +E  E+A NAI  +NGML+NDK+VFVGH + K++R++   
Sbjct: 166 LSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFD 225

Query: 203 AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDA 262
            +K  F N+++KN+D   T+E+ +KIF ++G ITSA + RD +GKS+ FGFVN+   + A
Sbjct: 226 EMKANFTNIYIKNIDPDVTEEEFRKIFEQFGEITSATLSRDPEGKSRGFGFVNYSTHESA 285

Query: 263 AKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDS 322
             AV+ ++ K+   ++ YVG+AQKK ERE+EL+ Q+E A  E   K+QG+NLY+KNL D 
Sbjct: 286 QAAVDEMHDKEVKTQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLTDD 345

Query: 323 IDDEKLKELFSEFGTITSCKVMRDPS---------------------------------- 348
           +DDEKL+ELF  +GTITS KVMRD +                                  
Sbjct: 346 VDDEKLRELFGPYGTITSAKVMRDSTPAERTETPDSEKEKEVNKENEKKEDEEKAAEEKP 405

Query: 349 -------------------GISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQR 389
                              G SKG GFV FS+P+EAS+A+ EMN +M+  KPLYVA+AQR
Sbjct: 406 KESDEEKKDETKKSDKKLLGKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKPLYVALAQR 465

Query: 390 KEERRARLQA 399
           K+ RR++L+A
Sbjct: 466 KDVRRSQLEA 475



 Score =  173 bits (439), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 97/293 (33%), Positives = 159/293 (54%), Gaps = 21/293 (7%)

Query: 117 TGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAI 175
           + ++++  LD S+    L++ FSS G + S ++  D  + +S G+ +V + N    + A+
Sbjct: 50  SASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERAL 109

Query: 176 DKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTI 235
           + LN  LI  K   +       +R+    KT   NVF+KNLD +  ++ L   F  +G I
Sbjct: 110 EDLNYTLIKGKPCRI----MWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNI 165

Query: 236 TSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQ--- 292
            S  V +D  G SK +GFV++E A+ A  A++ +NG   +D++ +VG    K +R+    
Sbjct: 166 LSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFD 225

Query: 293 ELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISK 352
           E+K  F              N+YIKN+   + +E+ +++F +FG ITS  + RDP G S+
Sbjct: 226 EMKANF-------------TNIYIKNIDPDVTEEEFRKIFEQFGEITSATLSRDPEGKSR 272

Query: 353 GSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
           G GFV +ST E A  A+ EM+ K + ++ LYV  AQ+K ER   L+ Q+   R
Sbjct: 273 GFGFVNYSTHESAQAAVDEMHDKEVKTQKLYVGRAQKKHEREEELRKQYEAAR 325



 Score = 74.7 bits (182), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/73 (53%), Positives = 53/73 (72%), Gaps = 1/73 (1%)

Query: 495 PITALST-ALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESP 553
           P  AL+  AL  A+P QQ+ +LGE+LYP ++  + + A K+TGMLLEMD TE+L LLE  
Sbjct: 648 PAGALTAQALNAAAPPQQKQMLGEALYPKIQAQQPELAGKITGMLLEMDNTELLGLLEDD 707

Query: 554 EALKAKVAEAMEV 566
           +AL+AKV EA+ V
Sbjct: 708 DALRAKVDEALSV 720


>sp|A5DM21|PABP_PICGU Polyadenylate-binding protein, cytoplasmic and nuclear
           OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566
           / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) GN=PAB1
           PE=3 SV=2
          Length = 631

 Score =  441 bits (1133), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 255/571 (44%), Positives = 360/571 (63%), Gaps = 50/571 (8%)

Query: 32  LYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVL 91
           LYVG+L+ +V ++ L+++FS +GQV S+RVCRD  T++SLGY YVN+   AD +RA++ L
Sbjct: 60  LYVGELNPSVNEALLFEIFSPIGQVSSIRVCRDAVTKKSLGYAYVNFHKHADGSRAIEEL 119

Query: 92  NFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIAT 151
           N++ ++ +  RIM+S RDPS+R++G GNIFIKNL  +ID+KALHDTFS+FG ILSCK+AT
Sbjct: 120 NYSLVDGRPCRIMWSQRDPSLRRNGDGNIFIKNLHPAIDNKALHDTFSAFGRILSCKVAT 179

Query: 152 DGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTKFN 209
           D  GQSK FGFV +E  E+A+ AI+ +NGML+ND++VFVG  + K++RE+    +K  F 
Sbjct: 180 DELGQSKCFGFVHYETAEAAEAAIENVNGMLLNDREVFVGKHVSKRDRESKFEEMKANFT 239

Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEAL 269
           NV+VKNL     +   ++IF  +G +TS  +  D +GKS+ FGFVNFEN + A  AV+ +
Sbjct: 240 NVYVKNLAPEVDNAKFEEIFKPFGPVTSVHLETDQEGKSRGFGFVNFENHESALNAVKEM 299

Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLK 329
           N K+ D ++ YVG+AQKK ER  ELK  +E    E + K+QG+NL++KNL DSID EKL+
Sbjct: 300 NDKEIDGQKLYVGRAQKKRERLDELKRLYESTRLEKLSKYQGVNLFVKNLDDSIDSEKLE 359

Query: 330 ELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQR 389
           E F  FGTITS +VM D +G SKG GFV FS+PEEA++A+ EMN +MI  KPLYVA+AQR
Sbjct: 360 EEFKPFGTITSARVMVDDAGKSKGFGFVCFSSPEEATKAITEMNQRMIQGKPLYVALAQR 419

Query: 390 KEERRARLQAQFS-----QMRPVAMGPSVPPRM--PM--------YPPGPSGLGQQFLYG 434
           K+ RR++L+ Q       +M+  A    +P +   PM        +PP   G  Q    G
Sbjct: 420 KDVRRSQLEQQIQARNQMRMQNAAAAAGMPGQFMSPMFYGQQPGFFPPNGRGGAQ----G 475

Query: 435 QAPPAIIPPQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPV----PV------------- 477
             PP   P  M PRG     P G+    +P     G  +PV    PV             
Sbjct: 476 PFPPN--PQMMMPRGGQMPPPQGQ----WPRAGPNGQPVPVYGMPPVYGGEFNGPNGQRQ 529

Query: 478 DMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLV----EQLERDAAAK 533
             GA  P R+   G+P     L+  ++    +QQ+ +LGE LYP +    +  E +AA K
Sbjct: 530 QRGAYPPNRNQKGGRPQ--RDLAAIISTVPVDQQKRILGEELYPKIVATGKAQEPEAAGK 587

Query: 534 VTGMLLEMDQTEVLHLLESPEALKAKVAEAM 564
           +TGM+L+++  E+L LLE  E  +    +A+
Sbjct: 588 ITGMMLDLENEEILALLEDDELFENHFEDAL 618


>sp|P21187|PABP_DROME Polyadenylate-binding protein OS=Drosophila melanogaster GN=pAbp
           PE=1 SV=3
          Length = 634

 Score =  440 bits (1132), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 229/431 (53%), Positives = 297/431 (68%), Gaps = 14/431 (3%)

Query: 31  SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
           SLYVGDL  +V +S L+D FS  G VLS+RVCRD+ TRRSLGY YVN+  PADA RALD 
Sbjct: 3   SLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALDT 62

Query: 91  LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA 150
           +NF  + NK IRIM+S RDPS+R+SG GN+FIKNLD++ID+KA++DTFS+FGNILSCK+A
Sbjct: 63  MNFDLVRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDRAIDNKAIYDTFSAFGNILSCKVA 122

Query: 151 TDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET-VAIKTK-F 208
           TD  G SKG+GFV FE +E+A  +IDK+NGML+N K+V+VG F+ ++ERE  +  K K F
Sbjct: 123 TDEKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLF 182

Query: 209 NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEA 268
            NV+VKN  E   DE LK+ F  YG ITS  VM   DGKSK FGFV FE  + A  AV+A
Sbjct: 183 TNVYVKNFTEDFDDEKLKEFFEPYGKITSYKVMSKEDGKSKGFGFVAFETTEAAEAAVQA 242

Query: 269 LNGKKF-DDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEK 327
           LNGK   + +  YV +AQKK+ER+QELK +FE+  ++  +   G+NLY+KNL D+IDD++
Sbjct: 243 LNGKDMGEGKSLYVARAQKKAERQQELKRKFEELKQKRHESVFGVNLYVKNLDDTIDDDR 302

Query: 328 LKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 387
           L+  FS +G ITS KVM D  G SKG GFV F+   EA+ A+ E+NG+++ SKPLYVA+A
Sbjct: 303 LRIAFSPYGNITSAKVMTDEEGRSKGFGFVCFNAASEATCAVTELNGRVVGSKPLYVALA 362

Query: 388 QRKEERRARLQAQF----SQMRPVAMGPSVPPR------MPMYPPGPSGLGQQFLYG-QA 436
           QRKEER+A L +Q+    + MR   +G    P       +P  P      G Q     + 
Sbjct: 363 QRKEERKAHLASQYMRHMTGMRMQQLGQIYQPNAASGFFVPTLPSNQRFFGSQVATQMRN 422

Query: 437 PPAIIPPQMPP 447
            P  +P   PP
Sbjct: 423 TPRWVPQVRPP 433



 Score = 84.3 bits (207), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 36/70 (51%), Positives = 56/70 (80%)

Query: 499 LSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKA 558
           +++ LANA P++Q+ +LGE LYP++E +  + A K+TGMLLE++ +E+LH++E  EALKA
Sbjct: 556 IASLLANAKPQEQKQILGERLYPMIEHMHANLAGKITGMLLEIENSELLHMIEDQEALKA 615

Query: 559 KVAEAMEVLR 568
           KV EA+ VL+
Sbjct: 616 KVEEAVAVLQ 625


>sp|Q2GSX8|PABP_CHAGB Polyadenylate-binding protein, cytoplasmic and nuclear
           OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 /
           DSM 1962 / NBRC 6347 / NRRL 1970) GN=PAB1 PE=3 SV=1
          Length = 783

 Score =  435 bits (1119), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 223/480 (46%), Positives = 310/480 (64%), Gaps = 62/480 (12%)

Query: 29  TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
           + SLYVG+LD +VT++ L++LFSQ+G V S+RVCRD  TRRSLGY YVNY + +D  +AL
Sbjct: 64  SASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDTITRRSLGYAYVNYNSTSDGEKAL 123

Query: 89  DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
           + LN+T +  +  RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++FGNILSCK
Sbjct: 124 EELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCK 183

Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKT 206
           +A D +G SKG+GFV +E  E+A  AI  +N ML+N+K+V+VG+ + K++R++    +K 
Sbjct: 184 VAQDENGNSKGYGFVHYETDEAAAQAIKHVNNMLLNEKKVYVGYHIPKKDRQSKFEEMKA 243

Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
            F N++VKN+    TDE+ + +F +YG +TS+ + RD +GKS+ FGFVNF   + AAKAV
Sbjct: 244 NFTNIYVKNISLEATDEEFRDLFAKYGDVTSSSLARDSEGKSRGFGFVNFTTHECAAKAV 303

Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
           E LNGK+F  ++ YVG+AQKK ERE+EL+  +E A  E  +K+QG+NLYIKNL D IDD+
Sbjct: 304 EELNGKEFRGQDLYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLADDIDDD 363

Query: 327 KLKELFSEFGTITSCKVMRDPS-------------------------------------- 348
           KL+++FSE+G ITS KVMRD                                        
Sbjct: 364 KLRQMFSEYGPITSAKVMRDAVTEGSAEEETEGKDKENKKEGEQAAEAEGEAEGAEKKTE 423

Query: 349 -------GISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQF 401
                  G SKG GFV FS P++A++A+AEMN +MI  KPLYVA+AQRK+ R+ +L+A  
Sbjct: 424 KKGDRRLGKSKGFGFVCFSNPDDATKAVAEMNQRMIEGKPLYVALAQRKDVRKNQLEASI 483

Query: 402 SQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPPQ----MPPRGHAYRYPLG 457
                + M  +            +GL QQ++  Q P    P Q    MPP G    +P G
Sbjct: 484 QARNQLRMQQAA---------AQAGLPQQYM--QTPVYYAPGQQPNFMPPGGRGMPFPQG 532



 Score = 71.2 bits (173), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 36/75 (48%), Positives = 50/75 (66%)

Query: 500 STALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAK 559
           S   A  +P+QQ+ +LGE+L+P ++ L+ D A K+TGMLLEMD  E+++LLE   AL AK
Sbjct: 681 SQLTATNNPQQQKQILGENLFPKIQALQPDLAGKITGMLLEMDNAELVNLLEDEAALVAK 740

Query: 560 VAEAMEVLRSVAQQQ 574
           V EAM V     + Q
Sbjct: 741 VNEAMAVYDEYVKSQ 755



 Score = 39.3 bits (90), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 28/135 (20%), Positives = 54/135 (40%), Gaps = 45/135 (33%)

Query: 25  NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTR---------------- 68
           N++   +LY+ +L  ++ D +L  +FS+ G + S +V RD  T                 
Sbjct: 344 NKYQGVNLYIKNLADDIDDDKLRQMFSEYGPITSAKVMRDAVTEGSAEEETEGKDKENKK 403

Query: 69  ----------------------------RSLGYGYVNYANPADAARALDVLNFTPLNNKS 100
                                       +S G+G+V ++NP DA +A+  +N   +  K 
Sbjct: 404 EGEQAAEAEGEAEGAEKKTEKKGDRRLGKSKGFGFVCFSNPDDATKAVAEMNQRMIEGKP 463

Query: 101 IRIMYSHRDPSIRKS 115
           + +  + R   +RK+
Sbjct: 464 LYVALAQRK-DVRKN 477


>sp|Q9H361|PABP3_HUMAN Polyadenylate-binding protein 3 OS=Homo sapiens GN=PABPC3 PE=1 SV=2
          Length = 631

 Score =  431 bits (1109), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 209/379 (55%), Positives = 279/379 (73%), Gaps = 4/379 (1%)

Query: 27  FLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAAR 86
           + T SLYVGDL  +VT++ LY+ FS  G +LS+R+CRDL T  S  Y YVN+ +  DA  
Sbjct: 8   YPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDAEH 67

Query: 87  ALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILS 146
           ALD +NF  +  K +RIM+S RDPS+RKSG GNIF+KNLDKSI++KAL+DT S+FGNILS
Sbjct: 68  ALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILS 127

Query: 147 CKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AI 204
           C +  D +G SKG+GFV FE  E+A+ AI K+NGML+N ++VFVG F  ++ERE    A 
Sbjct: 128 CNVVCDENG-SKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKEREAELGAR 186

Query: 205 KTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAK 264
             +F NV++KN  E   DE LK +FG++G   S  VM D  GKSK FGFV+FE  +DA K
Sbjct: 187 AKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQK 246

Query: 265 AVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSID 324
           AV+ +NGK+ + ++ YVG+AQKK ER+ ELK  FEQ  ++ + ++Q +NLY+KNL D ID
Sbjct: 247 AVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGID 306

Query: 325 DEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYV 384
           DE+L++ FS FGTITS KVM +  G SKG GFV FS+PEEA++A+ EMNG+++ +KPLYV
Sbjct: 307 DERLRKAFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365

Query: 385 AVAQRKEERRARLQAQFSQ 403
           A+AQRKEER+A L  ++ Q
Sbjct: 366 ALAQRKEERQAYLTNEYMQ 384



 Score =  192 bits (489), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 112/290 (38%), Positives = 165/290 (56%), Gaps = 21/290 (7%)

Query: 31  SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
           +++V +LD ++ +  LYD  S  G +LS  V  D +   S GYG+V++     A RA+  
Sbjct: 100 NIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENG--SKGYGFVHFETHEAAERAIKK 157

Query: 91  LNFTPLNNKSIRI----MYSHRDPSI--RKSGTGNIFIKNLDKSIDHKALHDTFSSFGNI 144
           +N   LN + + +        R+  +  R     N++IKN  + +D + L D F  FG  
Sbjct: 158 MNGMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPA 217

Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAI 204
           LS K+ TD SG+SKGFGFV FE  E AQ A+D++NG  +N KQ++VG   +K ER+T   
Sbjct: 218 LSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELK 277

Query: 205 KT------------KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFG 252
           +T            +  N++VKNLD+   DE L+K F  +GTITSA VM +G G+SK FG
Sbjct: 278 RTFEQMKQDRITRYQVVNLYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEG-GRSKGFG 336

Query: 253 FVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAM 302
           FV F + ++A KAV  +NG+    +  YV  AQ+K ER+  L  ++ Q M
Sbjct: 337 FVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAYLTNEYMQRM 386



 Score =  186 bits (473), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 110/299 (36%), Positives = 173/299 (57%), Gaps = 18/299 (6%)

Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATD--GSGQSKGFGFVQFE 166
           +PS     T ++++ +L   +    L++ FS  G ILS +I  D   SG S  + +V F+
Sbjct: 2   NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSS-NYAYVNFQ 60

Query: 167 NKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLK 226
           + + A++A+D +N  +I  K V +       +R+    K+   N+FVKNLD+S  ++ L 
Sbjct: 61  HTKDAEHALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFVKNLDKSINNKALY 116

Query: 227 KIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQK 286
                +G I S  V+ D +G SK +GFV+FE  + A +A++ +NG   + R+ +VG+ + 
Sbjct: 117 DTVSAFGNILSCNVVCDENG-SKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKS 175

Query: 287 KSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRD 346
           + ERE EL  + ++            N+YIKN G+ +DDE+LK+LF +FG   S KVM D
Sbjct: 176 RKEREAELGARAKEF----------PNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD 225

Query: 347 PSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
            SG SKG GFV+F   E+A +A+ EMNGK +  K +YV  AQ+K ER+  L+  F QM+
Sbjct: 226 ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMK 284



 Score = 80.5 bits (197), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 62/83 (74%)

Query: 497 TALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEAL 556
           T  ++ LA+A P++Q+ +LGE L+PL++ +    A K+TGMLLE+D +E+L++LESPE+L
Sbjct: 539 TLTASRLASAPPQKQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLYMLESPESL 598

Query: 557 KAKVAEAMEVLRSVAQQQANNPA 579
           ++KV EA+ VL++   ++A   A
Sbjct: 599 RSKVDEAVAVLQAHQAKEATQKA 621



 Score = 44.3 bits (103), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 23/84 (27%), Positives = 45/84 (53%), Gaps = 2/84 (2%)

Query: 25  NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
            ++   +LYV +LD  + D +L   FS  G + S +V   +   RS G+G+V +++P +A
Sbjct: 289 TRYQVVNLYVKNLDDGIDDERLRKAFSPFGTITSAKVM--MEGGRSKGFGFVCFSSPEEA 346

Query: 85  ARALDVLNFTPLNNKSIRIMYSHR 108
            +A+  +N   +  K + +  + R
Sbjct: 347 TKAVTEMNGRIVATKPLYVALAQR 370


>sp|Q9ZQA8|PABPX_ARATH Probable polyadenylate-binding protein At2g36660 OS=Arabidopsis
           thaliana GN=At2g36660 PE=3 SV=1
          Length = 609

 Score =  405 bits (1042), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 237/566 (41%), Positives = 344/566 (60%), Gaps = 28/566 (4%)

Query: 28  LTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARA 87
           +T SLYVGDL  +VT+  LYD F++   + SVR+C+D S+ RSL YGY N+ +  DA  A
Sbjct: 22  VTASLYVGDLHPSVTEGILYDAFAEFKSLTSVRLCKDASSGRSLCYGYANFLSRQDANLA 81

Query: 88  LDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSC 147
           ++  N + LN K IR+M+S R P  R++G GN+F+KNL +S+ +  L D F  FGNI+SC
Sbjct: 82  IEKKNNSLLNGKMIRVMWSVRAPDARRNGVGNVFVKNLPESVTNAVLQDMFKKFGNIVSC 141

Query: 148 KIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK 207
           K+AT   G+S+G+GFVQFE +++A  AI  LN  ++ DK+++VG F++K +R  V  + K
Sbjct: 142 KVATLEDGKSRGYGFVQFEQEDAAHAAIQTLNSTIVADKEIYVGKFMKKTDR--VKPEEK 199

Query: 208 FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVE 267
           + N+++KNLD   +++ L++ F E+G I S  + +D +   + + FVNF+N +DA +A E
Sbjct: 200 YTNLYMKNLDADVSEDLLREKFAEFGKIVSLAIAKDENRLCRGYAFVNFDNPEDARRAAE 259

Query: 268 ALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEK 327
            +NG KF  +  YVG+AQKK+EREQ L+ QF++  +E     +  N+Y+KN+  ++ +E+
Sbjct: 260 TVNGTKFGSKCLYVGRAQKKAEREQLLREQFKEKHEEQKMIAKVSNIYVKNVNVAVTEEE 319

Query: 328 LKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVA 387
           L++ FS+ GTITS K+M D  G SKG GFV FSTPEEA  A+   +G+M   KPLYVA+A
Sbjct: 320 LRKHFSQCGTITSTKLMCDEKGKSKGFGFVCFSTPEEAIDAVKTFHGQMFHGKPLYVAIA 379

Query: 388 QRKEERRARLQAQFS---QMRPVAMGPSVPP--RMPMY----PPG------PSGLGQQFL 432
           Q+KE+R+ +LQ QF    + R  +   SV P    P+Y     PG      P       +
Sbjct: 380 QKKEDRKMQLQVQFGNRVEARKSSSSASVNPGTYAPLYYTNTHPGMVYQSYPLMWKSANM 439

Query: 433 YGQAPP---AIIPPQM----PPRGHAYRY-PLGRNMQDF-PFDMGAGSMLPVPVDMGAGI 483
            G + P   A+  P M    P +    R   L RN   + P    +  MLP+  D     
Sbjct: 440 IGSSYPNSEAVTYPPMVANAPSKNRQNRIGKLDRNAVSYVPNVYQSTQMLPLSRDFSKQQ 499

Query: 484 PRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQ 543
             R    G+ M  +           E Q  LLGE L+PLVE+LE   A K+TGMLLEMD+
Sbjct: 500 HSRTYGRGKEMKKSIQQRQSETVGMEMQ--LLGELLHPLVEKLEPQLANKITGMLLEMDK 557

Query: 544 TEVLHLLESPEALKAKVAEAMEVLRS 569
           +E+L LL+SPE L  +V EA EVL+S
Sbjct: 558 SELLLLLKSPEDLAVRVDEAFEVLKS 583


>sp|A2Q848|PABP_ASPNC Polyadenylate-binding protein, cytoplasmic and nuclear
           OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513)
           GN=pab1 PE=3 SV=1
          Length = 731

 Score =  404 bits (1039), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 188/326 (57%), Positives = 247/326 (75%), Gaps = 2/326 (0%)

Query: 23  SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPA 82
           + NQ  + SLYVG+LD +VT++ LY+LFS +GQV S+RVCRD  TRRSLGY YVNY N A
Sbjct: 47  AANQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTA 106

Query: 83  DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
           D  RAL+ LN+T +  K  RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++FG
Sbjct: 107 DGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFG 166

Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 202
           NILSCK+A D  G SKG+GFV +E  E+A NAI  +NGML+NDK+VFVGH + K++R++ 
Sbjct: 167 NILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSK 226

Query: 203 --AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENAD 260
              +K  F NV++KNLD    D++ +K+F ++G ITSA + RD +GKS+ FGFVNF   +
Sbjct: 227 FEEMKANFTNVYIKNLDSEIDDDEFRKMFEKFGEITSATLSRDQEGKSRGFGFVNFSTHE 286

Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLG 320
            A  AVE +N K+   ++ YVG+AQKK ERE+EL+ Q+E A  E   K+QG+NLY+KNL 
Sbjct: 287 SAQAAVEEMNDKEIRSQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLT 346

Query: 321 DSIDDEKLKELFSEFGTITSCKVMRD 346
           D IDDEKL+ELF  +GTITS KVMRD
Sbjct: 347 DDIDDEKLRELFGPYGTITSAKVMRD 372



 Score =  181 bits (459), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 104/300 (34%), Positives = 163/300 (54%), Gaps = 21/300 (7%)

Query: 110 PSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENK 168
           P+  +  + ++++  LD S+    L++ FSS G + S ++  D  + +S G+ +V + N 
Sbjct: 46  PAANQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNT 105

Query: 169 ESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKI 228
              + A++ LN  LI  K   +       +R+    KT   NVF+KNLD +  ++ L   
Sbjct: 106 ADGERALEDLNYTLIKGKPCRI----MWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDT 161

Query: 229 FGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKS 288
           F  +G I S  V +D  G SK +GFV++E A+ A  A++ +NG   +D++ +VG    K 
Sbjct: 162 FAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKK 221

Query: 289 ERE---QELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMR 345
           +R+   +E+K  F              N+YIKNL   IDD++ +++F +FG ITS  + R
Sbjct: 222 DRQSKFEEMKANF-------------TNVYIKNLDSEIDDDEFRKMFEKFGEITSATLSR 268

Query: 346 DPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
           D  G S+G GFV FST E A  A+ EMN K I S+ LYV  AQ+K ER   L+ Q+   R
Sbjct: 269 DQEGKSRGFGFVNFSTHESAQAAVEEMNDKEIRSQKLYVGRAQKKHEREEELRKQYEAAR 328



 Score =  100 bits (250), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 95/303 (31%), Positives = 128/303 (42%), Gaps = 98/303 (32%)

Query: 345 RDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQ- 403
           + P G SKG GFV FS+P+EAS+A+ EMN +M+  KPLYVA+AQRK+ RR++L+A     
Sbjct: 428 KKPFGKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKPLYVALAQRKDVRRSQLEASIQAR 487

Query: 404 ------------------MRP-VAMGPSVPPRMP------MYPPGPSGL----------- 427
                             M+P V  GP     +P       +PP P  +           
Sbjct: 488 NTIRQQQAAAAAGMPQPYMQPAVFYGPGQQGFIPGGQRGMAFPPQPGMVMGIPGGRPGQY 547

Query: 428 -----GQQFLYGQAPPAIIPP---QMPPRG--------HAYRYPLGRNMQDFPFDMGAGS 471
                GQQ   G  P   IPP   Q  P G        +   YP    M    F  GAG 
Sbjct: 548 PGPFPGQQGGRGMGPNQQIPPNFAQGIPMGMQGPGGIPNGMGYP---QMAQVQFGRGAGG 604

Query: 472 MLPVP-VDMGAGI-----------------------------------PRRDASVGQPMP 495
              VP + MG G+                                   P+  A+ G    
Sbjct: 605 RGQVPGMPMGQGMRGGPGYGQGRGAPVQQGQMRPGQGGRGQNAAAPAGPQEGAAGG---- 660

Query: 496 ITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEA 555
               +  L  A P QQ+ +LGE+LYP ++  + + A K+TGMLLEMD TE+L L   P A
Sbjct: 661 --VNAQTLGAAPPAQQKQMLGEALYPKIQAQQPELAGKITGMLLEMDNTELLSLTRKPCA 718

Query: 556 LKA 558
            ++
Sbjct: 719 PRS 721



 Score = 80.9 bits (198), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 70/286 (24%), Positives = 123/286 (43%), Gaps = 51/286 (17%)

Query: 30  TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALD 89
           T++Y+ +LD  + D +   +F + G++ S  + RD   + S G+G+VN++    A  A++
Sbjct: 235 TNVYIKNLDSEIDDDEFRKMFEKFGEITSATLSRDQEGK-SRGFGFVNFSTHESAQAAVE 293

Query: 90  VLNFTPLNNKSI---RIMYSH-RDPSIRKSGTG------------NIFIKNLDKSIDHKA 133
            +N   + ++ +   R    H R+  +RK                N+++KNL   ID + 
Sbjct: 294 EMNDKEIRSQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLTDDIDDEK 353

Query: 134 LHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHF 193
           L + F  +G I S K+  D             E  +S  +A  +      NDK+      
Sbjct: 354 LRELFGPYGTITSAKVMRD----------TNVERDQSPDSAGKEKEADKENDKEATPEAE 403

Query: 194 LRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGF 253
             ++  E  +  ++  +   K  D        KK FG                KSK FGF
Sbjct: 404 KAEKAEEKPSESSEEKDKEAKKSD--------KKPFG----------------KSKGFGF 439

Query: 254 VNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFE 299
           V F + D+A+KAV  +N +  + +  YV  AQ+K  R  +L+   +
Sbjct: 440 VCFSSPDEASKAVTEMNQRMVNGKPLYVALAQRKDVRRSQLEASIQ 485


>sp|Q2UK72|PABP_ASPOR Polyadenylate-binding protein, cytoplasmic and nuclear
           OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40)
           GN=pab1 PE=3 SV=1
          Length = 765

 Score =  402 bits (1033), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 184/324 (56%), Positives = 248/324 (76%), Gaps = 2/324 (0%)

Query: 25  NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADA 84
           +Q  + SLYVG+LD +VT++ LY+LFS +GQV S+RVCRD  TRRSLGY YVNY N AD 
Sbjct: 44  SQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADG 103

Query: 85  ARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNI 144
            RAL+ LN+T +  K  RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++FGNI
Sbjct: 104 ERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNI 163

Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV-- 202
           LSCK+A D  G SKG+GFV +E  E+A NAI  +NGML+NDK+VFVGH + K++R++   
Sbjct: 164 LSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFE 223

Query: 203 AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDA 262
            +K  F NV++KN+D+  T+E+ +++F ++G ITSA + RD +GKS+ FGFVNF   + A
Sbjct: 224 EMKANFTNVYIKNIDQDVTEEEFRELFEKFGEITSATLSRDQEGKSRGFGFVNFSTHESA 283

Query: 263 AKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDS 322
             AV+ +N K+   ++ YVG+AQKK ERE+EL+ Q+E A  E   K+QG+NLY+KNL D 
Sbjct: 284 QAAVDEMNEKEIRTQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLTDD 343

Query: 323 IDDEKLKELFSEFGTITSCKVMRD 346
           +DDEKL+ELF  +GTITS KVMRD
Sbjct: 344 VDDEKLRELFGPYGTITSAKVMRD 367



 Score =  218 bits (556), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 207/672 (30%), Positives = 304/672 (45%), Gaps = 158/672 (23%)

Query: 31  SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
           ++++ +LD  + +  L+D F+  G +LS +V +D     S GYG+V+Y     A  A+  
Sbjct: 138 NVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQD-EFGNSKGYGFVHYETAEAANNAIKH 196

Query: 91  LNFTPLNNKSIRIMY--SHRDPSIR----KSGTGNIFIKNLDKSIDHKALHDTFSSFGNI 144
           +N   LN+K + + +  S +D   +    K+   N++IKN+D+ +  +   + F  FG I
Sbjct: 197 VNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNIDQDVTEEEFRELFEKFGEI 256

Query: 145 LSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET--- 201
            S  ++ D  G+S+GFGFV F   ESAQ A+D++N   I  ++++VG   +K ERE    
Sbjct: 257 TSATLSRDQEGKSRGFGFVNFSTHESAQAAVDEMNEKEIRTQKLYVGRAQKKHEREEELR 316

Query: 202 ---------VAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFG 252
                     A K +  N++VKNL +   DE L+++FG YGTITSA VMRD         
Sbjct: 317 KQYEAARLEKASKYQGVNLYVKNLTDDVDDEKLRELFGPYGTITSAKVMRD--------- 367

Query: 253 FVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGL 312
             N E                  D+E    +A K++E+E     + E+  ++  D   G 
Sbjct: 368 -TNIERTQTPE-----------SDKEKENKEATKENEKESSEAEKAEKTEEKPADS--GD 413

Query: 313 NLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEM 372
                      D + L                    G SKG GFV FS+P+EAS+A+ EM
Sbjct: 414 EKKEDKESKKADKKGL--------------------GKSKGFGFVCFSSPDEASKAVTEM 453

Query: 373 NGKMIVSKPLYVAVAQRKEERRARLQAQFSQ-------------------MRP-VAMGPS 412
           N +M+  KPLYVA+AQRK+ RR++L+A                       M+P V  GP 
Sbjct: 454 NQRMVNGKPLYVALAQRKDVRRSQLEASIQARNTIRQQQAAAAAGMPQPYMQPAVFYGPG 513

Query: 413 VPPRMP------MYPPGP----SGL-------------GQQFLYGQAPPAIIPP--QMPP 447
               +P       +PP P    +G+             GQQ   G  P   +PP  Q  P
Sbjct: 514 QQGFIPGQRGGIAFPPQPGMVMAGIPGGRPGQYPGPFPGQQGGRGMGPNQQLPPNFQGIP 573

Query: 448 RG-------HAYRYPLGRNMQDFPFDMGAGSMLPVP--VDMGAG------------IPRR 486
            G       +   YP G  M    F  GAG    VP   +MG G            +P +
Sbjct: 574 MGAMQGPVPNGMGYPQG--MAQVQFGRGAGGRGQVPGMPNMGQGMRGPGYGQGRGGVPVQ 631

Query: 487 ----------------DASVGQPMPITA---LSTALANASPEQQRTLLGESLYPLVEQLE 527
                            A  G+P    A    + AL+ A P QQ+ +LGE+LYP ++  +
Sbjct: 632 QGQMRPGQGGRGQNAAQAPAGRPEEAVAGGLTAQALSAAPPPQQKQMLGEALYPKIQAQQ 691

Query: 528 RDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVL---------RSVAQQQANNP 578
            + A K+TGMLLEM+ TE+L LLE  EAL+AKV EA+ V           S A  +A  P
Sbjct: 692 PELAGKITGMLLEMENTELLSLLEDEEALRAKVDEALNVYDEYMKNKGGESEATGEAAKP 751

Query: 579 ADQLASLSLNEN 590
            +     S  EN
Sbjct: 752 KEAAKETSTEEN 763



 Score =  176 bits (447), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 102/300 (34%), Positives = 162/300 (54%), Gaps = 21/300 (7%)

Query: 110 PSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENK 168
           P+  +  + ++++  LD S+    L++ FSS G + S ++  D  + +S G+ +V + N 
Sbjct: 41  PNASQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNT 100

Query: 169 ESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKI 228
              + A++ LN  LI  K   +       +R+    KT   NVF+KNLD +  ++ L   
Sbjct: 101 ADGERALEDLNYTLIKGKPCRI----MWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDT 156

Query: 229 FGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKS 288
           F  +G I S  V +D  G SK +GFV++E A+ A  A++ +NG   +D++ +VG    K 
Sbjct: 157 FAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKK 216

Query: 289 ERE---QELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMR 345
           +R+   +E+K  F              N+YIKN+   + +E+ +ELF +FG ITS  + R
Sbjct: 217 DRQSKFEEMKANF-------------TNVYIKNIDQDVTEEEFRELFEKFGEITSATLSR 263

Query: 346 DPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
           D  G S+G GFV FST E A  A+ EMN K I ++ LYV  AQ+K ER   L+ Q+   R
Sbjct: 264 DQEGKSRGFGFVNFSTHESAQAAVDEMNEKEIRTQKLYVGRAQKKHEREEELRKQYEAAR 323


>sp|A4QUF0|PABP_MAGO7 Polyadenylate-binding protein, cytoplasmic and nuclear
           OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 /
           FGSC 8958) GN=PAB1 PE=3 SV=1
          Length = 762

 Score =  390 bits (1001), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 179/321 (55%), Positives = 248/321 (77%), Gaps = 3/321 (0%)

Query: 29  TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
           + SLYVG+LD +VT++ L++LFSQ+G V S+RVCRD  TRRSLGY YVNY   AD  +AL
Sbjct: 60  SASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTADGEKAL 119

Query: 89  DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
           + LN+T +  +  RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++FGNILSCK
Sbjct: 120 EELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCK 179

Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKT 206
           +A D +G SKG+GFV +E  E+A  AI  +NGML+N+K+V+VGH + K++R++    +K 
Sbjct: 180 VAQDENGNSKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKDRQSKFDEMKA 239

Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGD-GKSKCFGFVNFENADDAAKA 265
            F N++VKN++   TD++ + +F +YG +TS+ + RD + GKS+ FGFVNF + +DA+KA
Sbjct: 240 NFTNIYVKNINPEVTDDEFRTLFEKYGDVTSSSLARDQETGKSRGFGFVNFTSHEDASKA 299

Query: 266 VEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDD 325
           V+ LN K+F  +  YVG+AQKK ERE+EL+  +E A +E   K+QG+NLYIKNL D +DD
Sbjct: 300 VQELNEKEFHGQNLYVGRAQKKHEREEELRKSYEAARQEKASKYQGVNLYIKNLDDEVDD 359

Query: 326 EKLKELFSEFGTITSCKVMRD 346
           EKL++LFSEFG ITS KVMRD
Sbjct: 360 EKLRQLFSEFGPITSAKVMRD 380



 Score =  157 bits (396), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 89/294 (30%), Positives = 159/294 (54%), Gaps = 22/294 (7%)

Query: 117 TGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAI 175
           + ++++  LD S+    L + FS  G++ S ++  D  + +S G+ +V +      + A+
Sbjct: 60  SASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTADGEKAL 119

Query: 176 DKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTI 235
           ++LN  LI  +   +       +R+    KT   NVF+KNLD +  ++ L   F  +G I
Sbjct: 120 EELNYTLIKGRPCRI----MWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNI 175

Query: 236 TSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQ--- 292
            S  V +D +G SK +GFV++E  + A++A++ +NG   ++++ YVG    K +R+    
Sbjct: 176 LSCKVAQDENGNSKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKDRQSKFD 235

Query: 293 ELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRD-PSGIS 351
           E+K  F              N+Y+KN+   + D++ + LF ++G +TS  + RD  +G S
Sbjct: 236 EMKANF-------------TNIYVKNINPEVTDDEFRTLFEKYGDVTSSSLARDQETGKS 282

Query: 352 KGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
           +G GFV F++ E+AS+A+ E+N K    + LYV  AQ+K ER   L+  +   R
Sbjct: 283 RGFGFVNFTSHEDASKAVQELNEKEFHGQNLYVGRAQKKHEREEELRKSYEAAR 336



 Score =  142 bits (358), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 99/341 (29%), Positives = 159/341 (46%), Gaps = 75/341 (21%)

Query: 31  SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
           ++++ +LD  + +  L+D F+  G +LS +V +D     S GYG+V+Y     A++A+  
Sbjct: 150 NVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQD-ENGNSKGYGFVHYETDEAASQAIKH 208

Query: 91  LNFTPLNNKSIRIMYSHRDPSI--------RKSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
           +N   LN K + +   H  P           K+   NI++KN++  +        F  +G
Sbjct: 209 VNGMLLNEKKVYV--GHHIPKKDRQSKFDEMKANFTNIYVKNINPEVTDDEFRTLFEKYG 266

Query: 143 NILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 201
           ++ S  +A D  +G+S+GFGFV F + E A  A+ +LN    + + ++VG   +K ERE 
Sbjct: 267 DVTSSSLARDQETGKSRGFGFVNFTSHEDASKAVQELNEKEFHGQNLYVGRAQKKHEREE 326

Query: 202 ------------VAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG----- 244
                        A K +  N+++KNLD+   DE L+++F E+G ITSA VMRD      
Sbjct: 327 ELRKSYEAARQEKASKYQGVNLYIKNLDDEVDDEKLRQLFSEFGPITSAKVMRDSITEPG 386

Query: 245 -------------------------DGKSK-----------------CFGFVNFENADDA 262
                                    D K +                  FGFV F N DDA
Sbjct: 387 EEGESKEGEESEKNKENKPEEKEGDDSKPEEKEGEDSKSKSKLGKSKGFGFVCFANPDDA 446

Query: 263 AKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMK 303
            KAV  +N +  +++  YV  AQ+K  R    K Q EQ+++
Sbjct: 447 TKAVAEMNQRMVNNKPLYVALAQRKDVR----KNQLEQSIQ 483



 Score =  100 bits (249), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 67/208 (32%), Positives = 114/208 (54%), Gaps = 20/208 (9%)

Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENADDAAKAVEA 268
           +++V  LD S T+  L ++F + G++ S  V RD    +S  + +VN+    D  KA+E 
Sbjct: 62  SLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTADGEKALEE 121

Query: 269 LNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKL 328
           LN      R   +  +Q+            + A+++T    QG N++IKNL  +ID++ L
Sbjct: 122 LNYTLIKGRPCRIMWSQR------------DPALRKT---GQG-NVFIKNLDVAIDNKAL 165

Query: 329 KELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
            + F+ FG I SCKV +D +G SKG GFV + T E AS+A+  +NG ++  K +YV    
Sbjct: 166 HDTFAAFGNILSCKVAQDENGNSKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHI 225

Query: 389 RKEERRAR---LQAQFSQMRPVAMGPSV 413
            K++R+++   ++A F+ +    + P V
Sbjct: 226 PKKDRQSKFDEMKANFTNIYVKNINPEV 253



 Score = 67.0 bits (162), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 32/78 (41%), Positives = 52/78 (66%)

Query: 507 SPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEV 566
           +P QQ+ +LGE+++P ++ +  + A K+TGMLLEMD TE++ L+E+  AL++KV EA+ V
Sbjct: 676 NPGQQKQILGEAIFPKIQAIHPELAGKITGMLLEMDNTELVALVENDGALRSKVDEALAV 735

Query: 567 LRSVAQQQANNPADQLAS 584
                +QQ +    Q  S
Sbjct: 736 YDDYVRQQGDGEGAQAPS 753



 Score = 61.6 bits (148), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/124 (35%), Positives = 65/124 (52%), Gaps = 25/124 (20%)

Query: 355 GFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVP 414
           GFV F+ P++A++A+AEMN +M+ +KPLYVA+AQRK+ R+ +L+        + M  +  
Sbjct: 436 GFVCFANPDDATKAVAEMNQRMVNNKPLYVALAQRKDVRKNQLEQSIQARNQLRMQQAA- 494

Query: 415 PRMPMYPPGPSGLGQQFLYGQAP----PAIIPPQMPPRGHAYRYPLGRNMQDFPFDMGAG 470
                     +G+ QQ++  QAP    P   P  MPP G       GR M   P+  G  
Sbjct: 495 --------AAAGMPQQYM--QAPVFYGPGSQPGFMPPAG-------GRGM---PYPQGGM 534

Query: 471 SMLP 474
            M P
Sbjct: 535 PMQP 538



 Score = 40.4 bits (93), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 33/137 (24%), Positives = 56/137 (40%), Gaps = 47/137 (34%)

Query: 25  NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTR---------------- 68
           +++   +LY+ +LD  V D +L  LFS+ G + S +V RD  T                 
Sbjct: 341 SKYQGVNLYIKNLDDEVDDEKLRQLFSEFGPITSAKVMRDSITEPGEEGESKEGEESEKN 400

Query: 69  ------------------------------RSLGYGYVNYANPADAARALDVLNFTPLNN 98
                                         +S G+G+V +ANP DA +A+  +N   +NN
Sbjct: 401 KENKPEEKEGDDSKPEEKEGEDSKSKSKLGKSKGFGFVCFANPDDATKAVAEMNQRMVNN 460

Query: 99  KSIRIMYSHRDPSIRKS 115
           K + +  + R   +RK+
Sbjct: 461 KPLYVALAQRK-DVRKN 476


>sp|Q0U1G2|PABP_PHANO Polyadenylate-binding protein, cytoplasmic and nuclear
           OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 /
           FGSC 10173) GN=PAB1 PE=3 SV=3
          Length = 744

 Score =  384 bits (986), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 179/318 (56%), Positives = 242/318 (76%), Gaps = 2/318 (0%)

Query: 29  TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARAL 88
           + SLYVG+LD +VT++ L++LFS +GQV S+RVCRD  TRRSLGY YVNY +  D  +AL
Sbjct: 47  SASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSSEDGEKAL 106

Query: 89  DVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCK 148
           + LN+T +  K  RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++FGNILSCK
Sbjct: 107 EELNYTVIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDHAIDNKALHDTFAAFGNILSCK 166

Query: 149 IATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKT 206
           +A D  G SKG+GFV +E  E+A NAI  +NGML+N+K+VFVGH + K+ER +    +K 
Sbjct: 167 VAQDELGNSKGYGFVHYETAEAANNAIKHVNGMLLNEKKVFVGHHIPKKERMSKFEEMKA 226

Query: 207 KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAV 266
            F N++VKN+D   TDED +++F ++G ITSA + RD  GKS+ FGFVN+   + AA AV
Sbjct: 227 NFTNIYVKNIDLDVTDEDFRELFEKHGDITSASIARDDQGKSRGFGFVNYIRHEAAAVAV 286

Query: 267 EALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDE 326
           + LN  +F  ++ YVG+AQKK ERE+EL+ Q+E A  E   K+QG+NLYIKNL D +DDE
Sbjct: 287 DHLNDIEFKGQKLYVGRAQKKHEREEELRKQYEAARLEKQSKYQGVNLYIKNLNDDVDDE 346

Query: 327 KLKELFSEFGTITSCKVM 344
           KL+++F+ FGTITS KV+
Sbjct: 347 KLRDMFTPFGTITSAKVI 364



 Score =  154 bits (390), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 92/293 (31%), Positives = 152/293 (51%), Gaps = 21/293 (7%)

Query: 117 TGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAI 175
           + ++++  LD S+    L + FSS G + S ++  D  + +S G+ +V + + E  + A+
Sbjct: 47  SASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSSEDGEKAL 106

Query: 176 DKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTI 235
           ++LN  +I  K   +       +R+    KT   NVF+KNLD +  ++ L   F  +G I
Sbjct: 107 EELNYTVIKGKPCRI----MWSQRDPALRKTGQGNVFIKNLDHAIDNKALHDTFAAFGNI 162

Query: 236 TSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSERE---Q 292
            S  V +D  G SK +GFV++E A+ A  A++ +NG   ++++ +VG    K ER    +
Sbjct: 163 LSCKVAQDELGNSKGYGFVHYETAEAANNAIKHVNGMLLNEKKVFVGHHIPKKERMSKFE 222

Query: 293 ELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISK 352
           E+K  F              N+Y+KN+   + DE  +ELF + G ITS  + RD  G S+
Sbjct: 223 EMKANF-------------TNIYVKNIDLDVTDEDFRELFEKHGDITSASIARDDQGKSR 269

Query: 353 GSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
           G GFV +   E A+ A+  +N      + LYV  AQ+K ER   L+ Q+   R
Sbjct: 270 GFGFVNYIRHEAAAVAVDHLNDIEFKGQKLYVGRAQKKHEREEELRKQYEAAR 322



 Score =  142 bits (358), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 98/342 (28%), Positives = 158/342 (46%), Gaps = 76/342 (22%)

Query: 31  SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDV 90
           ++++ +LD  + +  L+D F+  G +LS +V +D     S GYG+V+Y     A  A+  
Sbjct: 137 NVFIKNLDHAIDNKALHDTFAAFGNILSCKVAQD-ELGNSKGYGFVHYETAEAANNAIKH 195

Query: 91  LNFTPLNNKSIRIMYSHRDPSIR--------KSGTGNIFIKNLDKSIDHKALHDTFSSFG 142
           +N   LN K  ++   H  P           K+   NI++KN+D  +  +   + F   G
Sbjct: 196 VNGMLLNEK--KVFVGHHIPKKERMSKFEEMKANFTNIYVKNIDLDVTDEDFRELFEKHG 253

Query: 143 NILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET- 201
           +I S  IA D  G+S+GFGFV +   E+A  A+D LN +    ++++VG   +K ERE  
Sbjct: 254 DITSASIARDDQGKSRGFGFVNYIRHEAAAVAVDHLNDIEFKGQKLYVGRAQKKHEREEE 313

Query: 202 ---------VAIKTKFN--NVFVKNLDESTTDEDLKKIFGEYGTITSAVVM--------- 241
                    +  ++K+   N+++KNL++   DE L+ +F  +GTITSA V+         
Sbjct: 314 LRKQYEAARLEKQSKYQGVNLYIKNLNDDVDDEKLRDMFTPFGTITSAKVILRDEEKKDE 373

Query: 242 ---------------------------------RDGD-----------GKSKCFGFVNFE 257
                                            + GD           GKSK FGFV F 
Sbjct: 374 EEKEVKEEKKEDEKKEDEEAKEGSSSEQNGEDTKAGDKVTIKGEKKILGKSKGFGFVCFS 433

Query: 258 NADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFE 299
           N D+A KAV  +N K  + +  YV  AQ+K  R+ +L+   +
Sbjct: 434 NPDEATKAVTEMNQKMIEGKPLYVALAQRKDVRKNQLEATIQ 475



 Score = 72.0 bits (175), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/92 (44%), Positives = 52/92 (56%), Gaps = 14/92 (15%)

Query: 349 GISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVA 408
           G SKG GFV FS P+EA++A+ EMN KMI  KPLYVA+AQRK+ R+ +L+A       + 
Sbjct: 422 GKSKGFGFVCFSNPDEATKAVTEMNQKMIEGKPLYVALAQRKDVRKNQLEATIQARNQLR 481

Query: 409 MGPS-------------VPPRMP-MYPPGPSG 426
           M                 P + P MYPPG  G
Sbjct: 482 MQQQQQQQFGGIPQMFIAPGQQPMMYPPGARG 513



 Score = 70.5 bits (171), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 32/66 (48%), Positives = 49/66 (74%)

Query: 501 TALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKV 560
           + L+ A+P QQ+ +LGE+LYP + +++ + A K+TGMLLEMD +E+++L     AL+AKV
Sbjct: 653 SVLSAAAPGQQKQMLGEALYPKIHEMQPELAGKITGMLLEMDNSELINLTADESALRAKV 712

Query: 561 AEAMEV 566
            EAM V
Sbjct: 713 DEAMSV 718


>sp|P0CB38|PAB4L_HUMAN Polyadenylate-binding protein 4-like OS=Homo sapiens GN=PABPC4L
           PE=2 SV=1
          Length = 370

 Score =  373 bits (958), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 188/367 (51%), Positives = 260/367 (70%), Gaps = 6/367 (1%)

Query: 26  QFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAA 85
           ++   SLYVGDL  +VT+  L+  FS VG VLS+R+CRD  TRRSLGY YVN+   ADA 
Sbjct: 6   KYRMASLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQ 65

Query: 86  RALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNIL 145
           +ALD +NF  +  KSIR+M+S RD  +R+SG GN+FIKNLDKSID+K L++ FS+FG IL
Sbjct: 66  KALDTMNFDIIKGKSIRLMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSAFGKIL 125

Query: 146 SCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIK 205
           S K+ +D  G SKG+ FV F+N+ +A  AI+++NG L+   +VFVG F  +++RE   ++
Sbjct: 126 SSKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKDREA-ELR 183

Query: 206 TK---FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDA 262
           +K   F NV++KN      DE LK +F +YG   S  VM D  GKSK FGFV+F++ + A
Sbjct: 184 SKASEFTNVYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDSHEAA 243

Query: 263 AKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDS 322
            KAVE +NG+  + +  +VG+AQKK ER+ ELK  FEQ  +E +   QG+ LYIKNL D+
Sbjct: 244 KKAVEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLKRERIRGCQGVKLYIKNLDDT 303

Query: 323 IDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPL 382
           IDDEKL+  FS FG+I+  KVM++  G SKG G + FS+PE+A++A+ EMNG+++ SKPL
Sbjct: 304 IDDEKLRNEFSSFGSISRVKVMQEE-GQSKGFGLICFSSPEDATKAMTEMNGRILGSKPL 362

Query: 383 YVAVAQR 389
            +A+AQR
Sbjct: 363 SIALAQR 369



 Score =  173 bits (438), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 103/288 (35%), Positives = 166/288 (57%), Gaps = 16/288 (5%)

Query: 119 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDK 177
           ++++ +L   +    L   FS+ G +LS +I  D  + +S G+ +V F     AQ A+D 
Sbjct: 11  SLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALDT 70

Query: 178 LNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITS 237
           +N  +I  K +     L   +R+    ++   NVF+KNLD+S  ++ L + F  +G I S
Sbjct: 71  MNFDIIKGKSIR----LMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSAFGKILS 126

Query: 238 AVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQ 297
           + VM D  G SK + FV+F+N   A +A+E +NGK     + +VG+ + + +RE EL+ +
Sbjct: 127 SKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKDREAELRSK 185

Query: 298 FEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFV 357
             +            N+YIKN G  +DDE+LK++FS++G   S KVM D SG SKG GFV
Sbjct: 186 ASEFT----------NVYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFV 235

Query: 358 AFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
           +F + E A +A+ EMNG+ I  + ++V  AQ+K ER+A L+  F Q++
Sbjct: 236 SFDSHEAAKKAVEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLK 283



 Score = 88.6 bits (218), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/211 (32%), Positives = 107/211 (50%), Gaps = 26/211 (12%)

Query: 202 VAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENAD 260
           VA K +  +++V +L    T++ L + F   G + S  + RD    +S  + +VNF    
Sbjct: 3   VAAKYRMASLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLA 62

Query: 261 DAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKF---QGL-NLYI 316
           DA KA++ +N   FD                  +KG+  + M    D +    G+ N++I
Sbjct: 63  DAQKALDTMN---FD-----------------IIKGKSIRLMWSQRDAYLRRSGIGNVFI 102

Query: 317 KNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKM 376
           KNL  SID++ L E FS FG I S KVM D  G SKG  FV F     A RA+ EMNGK+
Sbjct: 103 KNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGKL 161

Query: 377 IVSKPLYVAVAQRKEERRARLQAQFSQMRPV 407
           +    ++V   + +++R A L+++ S+   V
Sbjct: 162 LKGCKVFVGRFKNRKDREAELRSKASEFTNV 192


>sp|P60050|PABP5_PONPY Polyadenylate-binding protein 5 OS=Pongo pygmaeus GN=PABPC5 PE=3
           SV=1
          Length = 382

 Score =  322 bits (826), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 179/359 (49%), Positives = 242/359 (67%), Gaps = 7/359 (1%)

Query: 34  VGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNF 93
           VGDLD +VT+  LY  F   G +   R+CRD  TR  LGYGYVN+  PADA  AL+ +NF
Sbjct: 22  VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81

Query: 94  TPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG 153
             +N K  R+M+S  D  +RKSG GNIFIKNLDKSID++AL   FS+FGNILSCK+  D 
Sbjct: 82  DLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDD 141

Query: 154 SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK----FN 209
           +G SKG+ +V F++  +A  AI  +NG+ +N++QV+VG F   +ER    ++T+    F 
Sbjct: 142 NG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEER-AAEVRTRDRATFT 199

Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEAL 269
           NVFVKN+ +   DE LK++F EYG   S  V+RD  GKSK FGFV +E  + A KAV  L
Sbjct: 200 NVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDL 259

Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLK 329
           +GK  D +  YVG+AQKK ER  EL+ +FE+   +   +  G+ +YIKNL ++I+DEKLK
Sbjct: 260 HGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLK 319

Query: 330 ELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
           E FS FG+I+  KVM +  G  KG G V FS+ EEA++A+ EMNG+++ SKPL+V + Q
Sbjct: 320 EEFSSFGSISRAKVMME-VGQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLGQ 377



 Score =  159 bits (403), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 107/300 (35%), Positives = 168/300 (56%), Gaps = 17/300 (5%)

Query: 122 IKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSK-GFGFVQFENKESAQNAIDKLNG 180
           + +LD  +    L+  F   G +   +I  D   +S  G+G+V F     A+ A++ +N 
Sbjct: 22  VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81

Query: 181 MLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVV 240
            LIN K       +  Q  + +  K+   N+F+KNLD+S  +  L  +F  +G I S  V
Sbjct: 82  DLINGKPF---RLMWSQPDDRLR-KSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKV 137

Query: 241 MRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQ 300
           + D +G SK + +V+F++   A +A+  +NG + ++R+ YVG+ +   ER  E++     
Sbjct: 138 VCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVR----- 191

Query: 301 AMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFS 360
               T D+    N+++KN+GD IDDEKLKELF E+G   S KV+RD SG SKG GFV + 
Sbjct: 192 ----TRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYE 247

Query: 361 TPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMY 420
           T E A +A+ +++GK I  K LYV  AQ+K ER A L+ +F ++       S PP +P+Y
Sbjct: 248 THEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERL--RLKEKSRPPGVPIY 305


>sp|P60049|PABP5_PANTR Polyadenylate-binding protein 5 OS=Pan troglodytes GN=PABPC5 PE=3
           SV=1
          Length = 382

 Score =  322 bits (826), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 179/359 (49%), Positives = 242/359 (67%), Gaps = 7/359 (1%)

Query: 34  VGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNF 93
           VGDLD +VT+  LY  F   G +   R+CRD  TR  LGYGYVN+  PADA  AL+ +NF
Sbjct: 22  VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81

Query: 94  TPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG 153
             +N K  R+M+S  D  +RKSG GNIFIKNLDKSID++AL   FS+FGNILSCK+  D 
Sbjct: 82  DLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDD 141

Query: 154 SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK----FN 209
           +G SKG+ +V F++  +A  AI  +NG+ +N++QV+VG F   +ER    ++T+    F 
Sbjct: 142 NG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEER-AAEVRTRDRATFT 199

Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEAL 269
           NVFVKN+ +   DE LK++F EYG   S  V+RD  GKSK FGFV +E  + A KAV  L
Sbjct: 200 NVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDL 259

Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLK 329
           +GK  D +  YVG+AQKK ER  EL+ +FE+   +   +  G+ +YIKNL ++I+DEKLK
Sbjct: 260 HGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLK 319

Query: 330 ELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
           E FS FG+I+  KVM +  G  KG G V FS+ EEA++A+ EMNG+++ SKPL+V + Q
Sbjct: 320 EEFSSFGSISRAKVMME-VGQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLGQ 377



 Score =  159 bits (403), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 107/300 (35%), Positives = 168/300 (56%), Gaps = 17/300 (5%)

Query: 122 IKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSK-GFGFVQFENKESAQNAIDKLNG 180
           + +LD  +    L+  F   G +   +I  D   +S  G+G+V F     A+ A++ +N 
Sbjct: 22  VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81

Query: 181 MLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVV 240
            LIN K       +  Q  + +  K+   N+F+KNLD+S  +  L  +F  +G I S  V
Sbjct: 82  DLINGKPF---RLMWSQPDDRLR-KSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKV 137

Query: 241 MRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQ 300
           + D +G SK + +V+F++   A +A+  +NG + ++R+ YVG+ +   ER  E++     
Sbjct: 138 VCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVR----- 191

Query: 301 AMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFS 360
               T D+    N+++KN+GD IDDEKLKELF E+G   S KV+RD SG SKG GFV + 
Sbjct: 192 ----TRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYE 247

Query: 361 TPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMY 420
           T E A +A+ +++GK I  K LYV  AQ+K ER A L+ +F ++       S PP +P+Y
Sbjct: 248 THEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERL--RLKEKSRPPGVPIY 305


>sp|P60048|PABP5_HYLLA Polyadenylate-binding protein 5 OS=Hylobates lar GN=PABPC5 PE=3
           SV=1
          Length = 382

 Score =  322 bits (826), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 179/359 (49%), Positives = 242/359 (67%), Gaps = 7/359 (1%)

Query: 34  VGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNF 93
           VGDLD +VT+  LY  F   G +   R+CRD  TR  LGYGYVN+  PADA  AL+ +NF
Sbjct: 22  VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81

Query: 94  TPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG 153
             +N K  R+M+S  D  +RKSG GNIFIKNLDKSID++AL   FS+FGNILSCK+  D 
Sbjct: 82  DLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDD 141

Query: 154 SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK----FN 209
           +G SKG+ +V F++  +A  AI  +NG+ +N++QV+VG F   +ER    ++T+    F 
Sbjct: 142 NG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEER-AAEVRTRDRATFT 199

Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEAL 269
           NVFVKN+ +   DE LK++F EYG   S  V+RD  GKSK FGFV +E  + A KAV  L
Sbjct: 200 NVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDL 259

Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLK 329
           +GK  D +  YVG+AQKK ER  EL+ +FE+   +   +  G+ +YIKNL ++I+DEKLK
Sbjct: 260 HGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLK 319

Query: 330 ELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
           E FS FG+I+  KVM +  G  KG G V FS+ EEA++A+ EMNG+++ SKPL+V + Q
Sbjct: 320 EEFSSFGSISRAKVMME-VGQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLGQ 377



 Score =  159 bits (403), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 107/300 (35%), Positives = 168/300 (56%), Gaps = 17/300 (5%)

Query: 122 IKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSK-GFGFVQFENKESAQNAIDKLNG 180
           + +LD  +    L+  F   G +   +I  D   +S  G+G+V F     A+ A++ +N 
Sbjct: 22  VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81

Query: 181 MLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVV 240
            LIN K       +  Q  + +  K+   N+F+KNLD+S  +  L  +F  +G I S  V
Sbjct: 82  DLINGKPF---RLMWSQPDDRLR-KSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKV 137

Query: 241 MRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQ 300
           + D +G SK + +V+F++   A +A+  +NG + ++R+ YVG+ +   ER  E++     
Sbjct: 138 VCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVR----- 191

Query: 301 AMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFS 360
               T D+    N+++KN+GD IDDEKLKELF E+G   S KV+RD SG SKG GFV + 
Sbjct: 192 ----TRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYE 247

Query: 361 TPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMY 420
           T E A +A+ +++GK I  K LYV  AQ+K ER A L+ +F ++       S PP +P+Y
Sbjct: 248 THEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERL--RLKEKSRPPGVPIY 305


>sp|Q96DU9|PABP5_HUMAN Polyadenylate-binding protein 5 OS=Homo sapiens GN=PABPC5 PE=2 SV=1
          Length = 382

 Score =  322 bits (826), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 179/359 (49%), Positives = 242/359 (67%), Gaps = 7/359 (1%)

Query: 34  VGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNF 93
           VGDLD +VT+  LY  F   G +   R+CRD  TR  LGYGYVN+  PADA  AL+ +NF
Sbjct: 22  VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81

Query: 94  TPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG 153
             +N K  R+M+S  D  +RKSG GNIFIKNLDKSID++AL   FS+FGNILSCK+  D 
Sbjct: 82  DLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDD 141

Query: 154 SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK----FN 209
           +G SKG+ +V F++  +A  AI  +NG+ +N++QV+VG F   +ER    ++T+    F 
Sbjct: 142 NG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEER-AAEVRTRDRATFT 199

Query: 210 NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEAL 269
           NVFVKN+ +   DE LK++F EYG   S  V+RD  GKSK FGFV +E  + A KAV  L
Sbjct: 200 NVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDL 259

Query: 270 NGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLK 329
           +GK  D +  YVG+AQKK ER  EL+ +FE+   +   +  G+ +YIKNL ++I+DEKLK
Sbjct: 260 HGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLK 319

Query: 330 ELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQ 388
           E FS FG+I+  KVM +  G  KG G V FS+ EEA++A+ EMNG+++ SKPL+V + Q
Sbjct: 320 EEFSSFGSISRAKVMME-VGQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLGQ 377



 Score =  159 bits (403), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 107/300 (35%), Positives = 168/300 (56%), Gaps = 17/300 (5%)

Query: 122 IKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSK-GFGFVQFENKESAQNAIDKLNG 180
           + +LD  +    L+  F   G +   +I  D   +S  G+G+V F     A+ A++ +N 
Sbjct: 22  VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81

Query: 181 MLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVV 240
            LIN K       +  Q  + +  K+   N+F+KNLD+S  +  L  +F  +G I S  V
Sbjct: 82  DLINGKPF---RLMWSQPDDRLR-KSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKV 137

Query: 241 MRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQ 300
           + D +G SK + +V+F++   A +A+  +NG + ++R+ YVG+ +   ER  E++     
Sbjct: 138 VCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVR----- 191

Query: 301 AMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFS 360
               T D+    N+++KN+GD IDDEKLKELF E+G   S KV+RD SG SKG GFV + 
Sbjct: 192 ----TRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYE 247

Query: 361 TPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMY 420
           T E A +A+ +++GK I  K LYV  AQ+K ER A L+ +F ++       S PP +P+Y
Sbjct: 248 THEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERL--RLKEKSRPPGVPIY 305


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.316    0.132    0.374 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 219,556,574
Number of Sequences: 539616
Number of extensions: 9921495
Number of successful extensions: 41586
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 804
Number of HSP's successfully gapped in prelim test: 385
Number of HSP's that attempted gapping in prelim test: 34054
Number of HSP's gapped (non-prelim): 4590
length of query: 593
length of database: 191,569,459
effective HSP length: 123
effective length of query: 470
effective length of database: 125,196,691
effective search space: 58842444770
effective search space used: 58842444770
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)