BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007680
(593 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/341 (32%), Positives = 160/341 (46%), Gaps = 30/341 (8%)
Query: 243 RNTKKSDHEDFLP--------LAIWRRTSYLDIQRATDEFNECNLLGTSSFGSVYKGTIS 294
R K DH +P L +R S ++Q A+D F+ N+LG FG VYKG ++
Sbjct: 1 RRKKPQDHFFDVPAEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLA 60
Query: 295 DGTDVAIKVFNLQLERAFR-SFDSECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNG 353
DGT VA+K + + F +E E++ HRNL+++ P + LV +M NG
Sbjct: 61 DGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANG 120
Query: 354 SLEKWLYSH---NYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENM 410
S+ L LD +R I + L YLH+ H IIH D+K NILLDE
Sbjct: 121 SVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHD-HCDPKIIHRDVKAANILLDEEF 179
Query: 411 VAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
A V DFG+ KL+ + V + TIG++APEY G S K DV+ YGV+L+E T
Sbjct: 180 EAVVGDFGLAKLMDYKDXHVXXAVR-GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 238
Query: 471 RKRPTDEMFIG---EMSLRRWVKESLPH-GLTEVVDANLVREEQAFSAKMDCILSIMDFA 526
+R D + ++ L WVK L L +VD +L + K + + ++ A
Sbjct: 239 GQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDL-----QGNYKDEEVEQLIQVA 293
Query: 527 LDCCMESPDMRINMTDAAAKLKKIKVKFLDDAAATNWRNFH 567
L C SP R M++ L+ D A W +
Sbjct: 294 LLCTQSSPMERPKMSEVVRMLE-------GDGLAERWEEWQ 327
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 106/318 (33%), Positives = 152/318 (47%), Gaps = 26/318 (8%)
Query: 260 RRTSYLDIQRATDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLER---AFRSFD 316
+R S ++Q A+D F N+LG FG VYKG ++DG VA+K L+ ER F
Sbjct: 18 KRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVK--RLKEERTQGGELQFQ 75
Query: 317 SECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSH---NYFLDILERLN 373
+E E++ HRNL+++ P + LV +M NGS+ L LD +R
Sbjct: 76 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQR 135
Query: 374 IMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQT 433
I + L YLH+ H IIH D+K NILLDE A V DFG+ KL+ + V
Sbjct: 136 IALGSARGLAYLHD-HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA 194
Query: 434 MTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIG---EMSLRRWVK 490
+ IG++APEY G S K DV+ YGV+L+E T +R D + ++ L WVK
Sbjct: 195 VR-GXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK 253
Query: 491 ESLPH-GLTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKK 549
L L +VD +L + K + + ++ AL C SP R M++ L+
Sbjct: 254 GLLKEKKLEALVDVDL-----QGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE- 307
Query: 550 IKVKFLDDAAATNWRNFH 567
D A W +
Sbjct: 308 ------GDGLAERWEEWQ 319
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 97/293 (33%), Positives = 151/293 (51%), Gaps = 14/293 (4%)
Query: 261 RTSYLDIQRATDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECE 320
R +D++ AT+ F+ L+G FG VYKG + DG VA+K + + F++E E
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 321 VLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHN---YFLDILERLNIMID 377
L RH +L+ ++ + L+ ++M NG+L++ LY + + +RL I I
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 378 VGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMA 437
L YLH + IIH D+K NILLDEN V ++DFGI K E + + +
Sbjct: 148 AARGLHYLH----TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKG 203
Query: 438 TIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEM-SLRRWVKESLPHG 496
T+GY+ PEY ++G ++ K DVYS+GV+L E + + EM +L W ES +G
Sbjct: 204 TLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNG 263
Query: 497 -LTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLK 548
L ++VD NL A + + + D A+ C S + R +M D KL+
Sbjct: 264 QLEQIVDPNL-----ADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/293 (33%), Positives = 150/293 (51%), Gaps = 14/293 (4%)
Query: 261 RTSYLDIQRATDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECE 320
R +D++ AT+ F+ L+G FG VYKG + DG VA+K + + F++E E
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 321 VLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHN---YFLDILERLNIMID 377
L RH +L+ ++ + L+ ++M NG+L++ LY + + +RL I I
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 378 VGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMA 437
L YLH + IIH D+K NILLDEN V ++DFGI K E + +
Sbjct: 148 AARGLHYLH----TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKG 203
Query: 438 TIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEM-SLRRWVKESLPHG 496
T+GY+ PEY ++G ++ K DVYS+GV+L E + + EM +L W ES +G
Sbjct: 204 TLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNG 263
Query: 497 -LTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLK 548
L ++VD NL A + + + D A+ C S + R +M D KL+
Sbjct: 264 QLEQIVDPNL-----ADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/227 (33%), Positives = 120/227 (52%), Gaps = 18/227 (7%)
Query: 263 SYLDIQRATDEFNE------CNLLGTSSFGSVYKGTISDGTDVAIK----VFNLQLERAF 312
S+ +++ T+ F+E N +G FG VYKG +++ T VA+K + ++ E
Sbjct: 16 SFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTT-VAVKKLAAMVDITTEELK 74
Query: 313 RSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERL 372
+ FD E +V+ +H NL+++L S+ D LV +MPNGSL L + + +
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 134
Query: 373 NIMIDVGSA--LEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSV 430
I G+A + +LH H IH D+K NILLDE A +SDFG+ + + +V
Sbjct: 135 RCKIAQGAANGINFLHENHH----IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190
Query: 431 RQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDE 477
+ + T YMAPE L G ++ K D+YS+GV+L+E T DE
Sbjct: 191 MXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDE 236
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/227 (33%), Positives = 119/227 (52%), Gaps = 18/227 (7%)
Query: 263 SYLDIQRATDEFNE------CNLLGTSSFGSVYKGTISDGTDVAIK----VFNLQLERAF 312
S+ +++ T+ F+E N +G FG VYKG +++ T VA+K + ++ E
Sbjct: 16 SFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTT-VAVKKLAAMVDITTEELK 74
Query: 313 RSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERL 372
+ FD E +V+ +H NL+++L S+ D LV +MPNGSL L + + +
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 134
Query: 373 NIMIDVGSA--LEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSV 430
I G+A + +LH H IH D+K NILLDE A +SDFG+ + + +V
Sbjct: 135 RCKIAQGAANGINFLHENHH----IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190
Query: 431 RQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDE 477
+ T YMAPE L G ++ K D+YS+GV+L+E T DE
Sbjct: 191 MXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDE 236
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/227 (33%), Positives = 118/227 (51%), Gaps = 18/227 (7%)
Query: 263 SYLDIQRATDEFNE------CNLLGTSSFGSVYKGTISDGTDVAIK----VFNLQLERAF 312
S+ +++ T+ F+E N +G FG VYKG +++ T VA+K + ++ E
Sbjct: 10 SFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEELK 68
Query: 313 RSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERL 372
+ FD E +V+ +H NL+++L S+ D LV +MPNGSL L + + +
Sbjct: 69 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 128
Query: 373 NIMIDVGSA--LEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSV 430
I G+A + +LH H IH D+K NILLDE A +SDFG+ + + V
Sbjct: 129 RCKIAQGAANGINFLHENHH----IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 184
Query: 431 RQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDE 477
+ T YMAPE L G ++ K D+YS+GV+L+E T DE
Sbjct: 185 MXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDE 230
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 113/227 (49%), Gaps = 18/227 (7%)
Query: 263 SYLDIQRATDEFNE------CNLLGTSSFGSVYKGTISDGTDVAIK----VFNLQLERAF 312
S+ +++ T+ F+E N G FG VYKG +++ T VA+K + ++ E
Sbjct: 7 SFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEELK 65
Query: 313 RSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYF--LDILE 370
+ FD E +V +H NL+++L S+ D LV + PNGSL L + L
Sbjct: 66 QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHX 125
Query: 371 RLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSV 430
R I + + +LH H IH D+K NILLDE A +SDFG+ + + V
Sbjct: 126 RCKIAQGAANGINFLHENHH----IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 181
Query: 431 RQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDE 477
+ + T Y APE L G ++ K D+YS+GV+L+E T DE
Sbjct: 182 XXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDE 227
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 105/199 (52%), Gaps = 9/199 (4%)
Query: 280 LGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFR--SFDSECEVLRNVRHRNLIKILSSY 337
+G SFG+V++ G+DVA+K+ Q A R F E +++ +RH N++ + +
Sbjct: 45 IGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 338 SNPDFKALVLEFMPNGSLEKWLYSHNYF--LDILERLNIMIDVGSALEYLHNGHSSVHII 395
+ P ++V E++ GSL + L+ LD RL++ DV + YLHN + I+
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPP--IV 161
Query: 396 HCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAK 455
H DLK N+L+D+ V DFG+ +L + + T +MAPE + + K
Sbjct: 162 HRDLKSPNLLVDKKYTVKVCDFGLSRL--KASXFLXSKXAAGTPEWMAPEVLRDEPSNEK 219
Query: 456 CDVYSYGVLLMETFTRKRP 474
DVYS+GV+L E T ++P
Sbjct: 220 SDVYSFGVILWELATLQQP 238
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 105/195 (53%), Gaps = 8/195 (4%)
Query: 280 LGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSN 339
LG FG V+ GT + T VAIK + +F E +V++ +RH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 340 PDFKALVLEFMPNGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCD 398
+V+E+M GSL +L +L + + +++ + S + Y+ ++ +H D
Sbjct: 85 EPI-YIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER----MNYVHRD 139
Query: 399 LKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDV 458
L+ NIL+ EN+V V+DFG+ +L+ + E + RQ I + APE L G + K DV
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFP-IKWTAPEAALYGRFTIKSDV 198
Query: 459 YSYGVLLMETFTRKR 473
+S+G+LL E T+ R
Sbjct: 199 WSFGILLTELTTKGR 213
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 104/195 (53%), Gaps = 8/195 (4%)
Query: 280 LGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSN 339
LG FG V+ GT + T VAIK + +F E +V++ +RH L+++ + S
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 74
Query: 340 PDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCD 398
+V E+M GSL +L +L + + +++ + S + Y+ ++ +H D
Sbjct: 75 EPI-XIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER----MNYVHRD 129
Query: 399 LKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDV 458
L+ NIL+ EN+V V+DFG+ +L+ + E + RQ I + APE L G + K DV
Sbjct: 130 LRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFP-IKWTAPEAALYGRFTIKSDV 188
Query: 459 YSYGVLLMETFTRKR 473
+S+G+LL E T+ R
Sbjct: 189 WSFGILLTELTTKGR 203
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 105/195 (53%), Gaps = 8/195 (4%)
Query: 280 LGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSN 339
LG FG V+ GT + T VAIK + +F E +V++ +RH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 340 PDFKALVLEFMPNGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCD 398
+V+E+M GSL +L +L + + +++ + S + Y+ ++ +H D
Sbjct: 85 EPI-YIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER----MNYVHRD 139
Query: 399 LKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDV 458
L+ NIL+ EN+V V+DFG+ +L+ + E + RQ I + APE L G + K DV
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDV 198
Query: 459 YSYGVLLMETFTRKR 473
+S+G+LL E T+ R
Sbjct: 199 WSFGILLTELTTKGR 213
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 104/195 (53%), Gaps = 8/195 (4%)
Query: 280 LGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSN 339
LG FG V+ GT + T VAIK + +F E +V++ +RH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKIRHEKLVQLYAVVSE 84
Query: 340 PDFKALVLEFMPNGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCD 398
+V E+M GSL +L +L + + +++ + S + Y+ ++ +H D
Sbjct: 85 EPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER----MNYVHRD 139
Query: 399 LKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDV 458
L+ NIL+ EN+V V+DFG+ +L+ + E + RQ I + APE L G + K DV
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDV 198
Query: 459 YSYGVLLMETFTRKR 473
+S+G+LL E T+ R
Sbjct: 199 WSFGILLTELTTKGR 213
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 105/199 (52%), Gaps = 9/199 (4%)
Query: 280 LGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFR--SFDSECEVLRNVRHRNLIKILSSY 337
+G SFG+V++ G+DVA+K+ Q A R F E +++ +RH N++ + +
Sbjct: 45 IGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 338 SNPDFKALVLEFMPNGSLEKWLYSHNYF--LDILERLNIMIDVGSALEYLHNGHSSVHII 395
+ P ++V E++ GSL + L+ LD RL++ DV + YLHN + I+
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPP--IV 161
Query: 396 HCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAK 455
H +LK N+L+D+ V DFG+ +L + + T +MAPE + + K
Sbjct: 162 HRNLKSPNLLVDKKYTVKVCDFGLSRL--KASTFLSSKSAAGTPEWMAPEVLRDEPSNEK 219
Query: 456 CDVYSYGVLLMETFTRKRP 474
DVYS+GV+L E T ++P
Sbjct: 220 SDVYSFGVILWELATLQQP 238
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 104/195 (53%), Gaps = 8/195 (4%)
Query: 280 LGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSN 339
LG FG V+ GT + T VAIK + +F E +V++ +RH L+++ + S
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 77
Query: 340 PDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCD 398
+V E+M GSL +L +L + + +++ + S + Y+ ++ +H D
Sbjct: 78 EPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER----MNYVHRD 132
Query: 399 LKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDV 458
L+ NIL+ EN+V V+DFG+ +L+ + E + RQ I + APE L G + K DV
Sbjct: 133 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDV 191
Query: 459 YSYGVLLMETFTRKR 473
+S+G+LL E T+ R
Sbjct: 192 WSFGILLTELTTKGR 206
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 104/195 (53%), Gaps = 8/195 (4%)
Query: 280 LGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSN 339
LG FG V+ GT + T VAIK + +F E +V++ +RH L+++ + S
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 333
Query: 340 PDFKALVLEFMPNGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCD 398
+V E+M GSL +L +L + + +++ + S + Y+ ++ +H D
Sbjct: 334 EPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER----MNYVHRD 388
Query: 399 LKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDV 458
L+ NIL+ EN+V V+DFG+ +L+ + E + RQ I + APE L G + K DV
Sbjct: 389 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDV 447
Query: 459 YSYGVLLMETFTRKR 473
+S+G+LL E T+ R
Sbjct: 448 WSFGILLTELTTKGR 462
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 106/198 (53%), Gaps = 14/198 (7%)
Query: 280 LGTSSFGSVYKGTISDGTDVAIKVF---NLQLERAFRSFDSECEVLRNVRHRNLIKILSS 336
LG FG V+ GT + T VAIK N+ E +F E +V++ +RH L+++ +
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPE----AFLQEAQVMKKLRHEKLVQLYAV 248
Query: 337 YSNPDFKALVLEFMPNGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYLHNGHSSVHII 395
S +V E+M GSL +L +L + + +++ + S + Y+ ++ +
Sbjct: 249 VSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER----MNYV 303
Query: 396 HCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAK 455
H DL+ NIL+ EN+V V+DFG+ +L+ + E + RQ I + APE L G + K
Sbjct: 304 HRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIK 362
Query: 456 CDVYSYGVLLMETFTRKR 473
DV+S+G+LL E T+ R
Sbjct: 363 SDVWSFGILLTELTTKGR 380
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 104/195 (53%), Gaps = 8/195 (4%)
Query: 280 LGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSN 339
LG FG V+ GT + T VAIK + +F E +V++ +RH L+++ + S
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 73
Query: 340 PDFKALVLEFMPNGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCD 398
+V E+M GSL +L +L + + +++ + S + Y+ ++ +H D
Sbjct: 74 EPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER----MNYVHRD 128
Query: 399 LKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDV 458
L+ NIL+ EN+V V+DFG+ +L+ + E + RQ I + APE L G + K DV
Sbjct: 129 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDV 187
Query: 459 YSYGVLLMETFTRKR 473
+S+G+LL E T+ R
Sbjct: 188 WSFGILLTELTTKGR 202
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 104/195 (53%), Gaps = 8/195 (4%)
Query: 280 LGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSN 339
LG FG V+ GT + T VAIK + +F E +V++ +RH L+++ + S
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 75
Query: 340 PDFKALVLEFMPNGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCD 398
+V E+M GSL +L +L + + +++ + S + Y+ ++ +H D
Sbjct: 76 EPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER----MNYVHRD 130
Query: 399 LKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDV 458
L+ NIL+ EN+V V+DFG+ +L+ + E + RQ I + APE L G + K DV
Sbjct: 131 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDV 189
Query: 459 YSYGVLLMETFTRKR 473
+S+G+LL E T+ R
Sbjct: 190 WSFGILLTELTTKGR 204
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 104/195 (53%), Gaps = 8/195 (4%)
Query: 280 LGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSN 339
LG FG V+ GT + T VAIK + +F E +V++ +RH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 340 PDFKALVLEFMPNGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCD 398
+V E+M GSL +L +L + + +++ + S + Y+ ++ +H D
Sbjct: 85 EPI-YIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER----MNYVHRD 139
Query: 399 LKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDV 458
L+ NIL+ EN+V V+DFG+ +L+ + E + RQ I + APE L G + K DV
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDV 198
Query: 459 YSYGVLLMETFTRKR 473
+S+G+LL E T+ R
Sbjct: 199 WSFGILLTELTTKGR 213
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 104/195 (53%), Gaps = 8/195 (4%)
Query: 280 LGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSN 339
LG FG V+ GT + T VAIK + +F E +V++ +RH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 340 PDFKALVLEFMPNGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCD 398
+V E+M GSL +L +L + + +++ + S + Y+ ++ +H D
Sbjct: 85 EPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER----MNYVHRD 139
Query: 399 LKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDV 458
L+ NIL+ EN+V V+DFG+ +L+ + E + RQ I + APE L G + K DV
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDV 198
Query: 459 YSYGVLLMETFTRKR 473
+S+G+LL E T+ R
Sbjct: 199 WSFGILLTELTTKGR 213
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 104/195 (53%), Gaps = 8/195 (4%)
Query: 280 LGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSN 339
LG FG V+ GT + T VAIK + +F E +V++ +RH L+++ + S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 340 PDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCD 398
+V E+M GSL +L +L + + +++ + S + Y+ ++ +H D
Sbjct: 251 EPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER----MNYVHRD 305
Query: 399 LKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDV 458
L+ NIL+ EN+V V+DFG+ +L+ + E + RQ I + APE L G + K DV
Sbjct: 306 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDV 364
Query: 459 YSYGVLLMETFTRKR 473
+S+G+LL E T+ R
Sbjct: 365 WSFGILLTELTTKGR 379
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 104/195 (53%), Gaps = 8/195 (4%)
Query: 280 LGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSN 339
LG FG V+ GT + T VAIK + +F E +V++ +RH L+++ + S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 340 PDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCD 398
+V E+M GSL +L +L + + +++ + S + Y+ ++ +H D
Sbjct: 251 EPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER----MNYVHRD 305
Query: 399 LKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDV 458
L+ NIL+ EN+V V+DFG+ +L+ + E + RQ I + APE L G + K DV
Sbjct: 306 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDV 364
Query: 459 YSYGVLLMETFTRKR 473
+S+G+LL E T+ R
Sbjct: 365 WSFGILLTELTTKGR 379
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 104/195 (53%), Gaps = 8/195 (4%)
Query: 280 LGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSN 339
LG FG V+ GT + T VAIK + +F E +V++ +RH L+++ + S
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 340 PDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCD 398
+V E+M GSL +L +L + + +++ + S + Y+ ++ +H D
Sbjct: 82 EPI-YIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVER----MNYVHRD 136
Query: 399 LKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDV 458
L+ NIL+ EN+V V+DFG+ +L+ + E + RQ I + APE L G + K DV
Sbjct: 137 LRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFP-IKWTAPEAALYGRFTIKSDV 195
Query: 459 YSYGVLLMETFTRKR 473
+S+G+LL E T+ R
Sbjct: 196 WSFGILLTELTTKGR 210
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 104/195 (53%), Gaps = 8/195 (4%)
Query: 280 LGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSN 339
LG FG V+ GT + T VAIK + +F E +V++ +RH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 340 PDFKALVLEFMPNGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCD 398
+V+E+M G L +L +L + + +++ + S + Y+ ++ +H D
Sbjct: 85 EPI-YIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER----MNYVHRD 139
Query: 399 LKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDV 458
L+ NIL+ EN+V V+DFG+ +L+ + E + RQ I + APE L G + K DV
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDV 198
Query: 459 YSYGVLLMETFTRKR 473
+S+G+LL E T+ R
Sbjct: 199 WSFGILLTELTTKGR 213
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 104/195 (53%), Gaps = 8/195 (4%)
Query: 280 LGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSN 339
LG FG V+ GT + T VAIK + +F E +V++ +RH L+++ + S
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 340 PDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCD 398
+V E+M GSL +L +L + + +++ + S + Y+ ++ +H D
Sbjct: 82 EPI-YIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVER----MNYVHRD 136
Query: 399 LKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDV 458
L+ NIL+ EN+V V+DFG+ +L+ + E + RQ I + APE L G + K DV
Sbjct: 137 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDV 195
Query: 459 YSYGVLLMETFTRKR 473
+S+G+LL E T+ R
Sbjct: 196 WSFGILLTELTTKGR 210
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 104/195 (53%), Gaps = 8/195 (4%)
Query: 280 LGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSN 339
LG FG V+ GT + T VAIK + +F E +V++ +RH L+++ + S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 340 PDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCD 398
+V E+M GSL +L +L + + +++ + S + Y+ ++ +H D
Sbjct: 251 EPI-YIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER----MNYVHRD 305
Query: 399 LKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDV 458
L+ NIL+ EN+V V+DFG+ +L+ + E + RQ I + APE L G + K DV
Sbjct: 306 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDV 364
Query: 459 YSYGVLLMETFTRKR 473
+S+G+LL E T+ R
Sbjct: 365 WSFGILLTELTTKGR 379
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 103/195 (52%), Gaps = 8/195 (4%)
Query: 280 LGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSN 339
LG FG V+ GT + T VAIK + +F E +V++ +RH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 340 PDFKALVLEFMPNGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCD 398
+V E+M GSL +L +L + + +++ + S + Y+ ++ +H D
Sbjct: 85 EPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER----MNYVHRD 139
Query: 399 LKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDV 458
L NIL+ EN+V V+DFG+ +L+ + E + RQ I + APE L G + K DV
Sbjct: 140 LAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDV 198
Query: 459 YSYGVLLMETFTRKR 473
+S+G+LL E T+ R
Sbjct: 199 WSFGILLTELTTKGR 213
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 103/195 (52%), Gaps = 8/195 (4%)
Query: 280 LGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSN 339
LG FG V+ GT + T VAIK + +F E +V++ +RH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 340 PDFKALVLEFMPNGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCD 398
+V E+M G L +L +L + + +++ + S + Y+ ++ +H D
Sbjct: 85 EPI-YIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER----MNYVHRD 139
Query: 399 LKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDV 458
L+ NIL+ EN+V V+DFG+ +L+ + E + RQ I + APE L G + K DV
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDV 198
Query: 459 YSYGVLLMETFTRKR 473
+S+G+LL E T+ R
Sbjct: 199 WSFGILLTELTTKGR 213
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 98/200 (49%), Gaps = 12/200 (6%)
Query: 280 LGTSSFGSVYKGTISDGTDVAIKVFNL--QLERAFRSFDSECEVLRNVRHRNLIKILSSY 337
+G+ SFG+VYKG DVA+K+ + F++F +E VLR RH N++ + Y
Sbjct: 44 IGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNIL-LFMGY 100
Query: 338 SNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHC 397
D A+V ++ SL K L+ + + ++I ++YLH + +IIH
Sbjct: 101 MTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH----AKNIIHR 156
Query: 398 DLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPE---YGLEGIVSA 454
D+K NI L E + + DFG+ + S + ++ +MAPE S
Sbjct: 157 DMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSF 216
Query: 455 KCDVYSYGVLLMETFTRKRP 474
+ DVYSYG++L E T + P
Sbjct: 217 QSDVYSYGIVLYELMTGELP 236
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 118/260 (45%), Gaps = 28/260 (10%)
Query: 280 LGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSN 339
LG FG V+ GT + T VAIK + SF E ++++ ++H L+++ + S
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGT-MSPESFLEEAQIMKKLKHDKLVQLYAVVSE 75
Query: 340 PDFKALVLEFMPNGSLEKWLY-SHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCD 398
+V E+M GSL +L L + +++ V + + Y+ ++ IH D
Sbjct: 76 EPI-YIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIER----MNYIHRD 130
Query: 399 LKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDV 458
L+ NIL+ ++ ++DFG+ +L+ + E + RQ I + APE L G + K DV
Sbjct: 131 LRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFP-IKWTAPEAALYGRFTIKSDV 189
Query: 459 YSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPH-GLTEVVDANLVREEQAFSAKMD 517
+S+G+LL E T+ R +P+ G+ V D
Sbjct: 190 WSFGILLTELVTKGR-------------------VPYPGMNNREVLEQVERGYRMPCPQD 230
Query: 518 CILSIMDFALDCCMESPDMR 537
C +S+ + + C + P+ R
Sbjct: 231 CPISLHELMIHCWKKDPEER 250
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 108/216 (50%), Gaps = 19/216 (8%)
Query: 269 RATDEFNECNL-----LGTSSFGSV---YKGTISDGTD--VAIKVFNLQLERAFRSFDSE 318
R +F E +L LG +FGSV + D T VA+K E R F+ E
Sbjct: 5 RDPTQFEERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 64
Query: 319 CEVLRNVRHRNLIK---ILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIM 375
E+L++++H N++K + S + K L++EF+P GSL ++L H +D ++ L
Sbjct: 65 IEILKSLQHDNIVKYKGVCYSAGRRNLK-LIMEFLPYGSLREYLQKHKERIDHIKLLQYT 123
Query: 376 IDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVR-QTM 434
+ +EYL + IH DL NIL++ + DFG+ K+L + ++ + +
Sbjct: 124 SQICKGMEYL----GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEP 179
Query: 435 TMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
+ I + APE E S DV+S+GV+L E FT
Sbjct: 180 GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 129/271 (47%), Gaps = 22/271 (8%)
Query: 278 NLLGTSSFGSVYKGT--ISDGTDVAIKVFNLQL---ERAFRSFDSECEVLRNVRHRNLIK 332
++G+ G V G + DV + + L+ ER R F SE ++ H N+I+
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIR 114
Query: 333 ILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSV 392
+ + +V E+M NGSL+ +L +H+ I++ + ++ VG+ + YL S +
Sbjct: 115 LEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYL----SDL 170
Query: 393 HIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTM-TMATIGYMAPEYGLEGI 451
+H DL N+L+D N+V VSDFG+ ++L + D+ T I + APE
Sbjct: 171 GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRT 230
Query: 452 VSAKCDVYSYGVLLMETFTR-KRP------TDEMFIGEMSLRRWVKESLPHGLTEVVDAN 504
S+ DV+S+GV++ E +RP D + E R PH L +++ +
Sbjct: 231 FSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGCPHALHQLM-LD 289
Query: 505 LVREEQAFSAKMDCILSIMDFALDCCMESPD 535
+++A + I+S+ LD + SP+
Sbjct: 290 CWHKDRAQRPRFSQIVSV----LDALIRSPE 316
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 129/271 (47%), Gaps = 22/271 (8%)
Query: 278 NLLGTSSFGSVYKGT--ISDGTDVAIKVFNLQL---ERAFRSFDSECEVLRNVRHRNLIK 332
++G+ G V G + DV + + L+ ER R F SE ++ H N+I+
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIR 114
Query: 333 ILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSV 392
+ + +V E+M NGSL+ +L +H+ I++ + ++ VG+ + YL S +
Sbjct: 115 LEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYL----SDL 170
Query: 393 HIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTM-TMATIGYMAPEYGLEGI 451
+H DL N+L+D N+V VSDFG+ ++L + D+ T I + APE
Sbjct: 171 GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRT 230
Query: 452 VSAKCDVYSYGVLLMETFTR-KRP------TDEMFIGEMSLRRWVKESLPHGLTEVVDAN 504
S+ DV+S+GV++ E +RP D + E R PH L +++ +
Sbjct: 231 FSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGCPHALHQLM-LD 289
Query: 505 LVREEQAFSAKMDCILSIMDFALDCCMESPD 535
+++A + I+S+ LD + SP+
Sbjct: 290 CWHKDRAQRPRFSQIVSV----LDALIRSPE 316
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 107/220 (48%), Gaps = 12/220 (5%)
Query: 260 RRTSYLDIQRATDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLE--RAFRSFDS 317
RR S D + + +G+ SFG+VYKG DVA+K+ N+ + ++F +
Sbjct: 24 RRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKN 81
Query: 318 ECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID 377
E VLR RH N++ + + P A+V ++ SL L+ ++++ ++I
Sbjct: 82 EVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 140
Query: 378 VGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMA 437
++YLH + IIH DLK NI L E++ + DFG+ + S +
Sbjct: 141 TAQGMDYLH----AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSG 196
Query: 438 TIGYMAPE---YGLEGIVSAKCDVYSYGVLLMETFTRKRP 474
+I +MAPE + S + DVY++G++L E T + P
Sbjct: 197 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 107/220 (48%), Gaps = 12/220 (5%)
Query: 260 RRTSYLDIQRATDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLE--RAFRSFDS 317
RR S D + + +G+ SFG+VYKG DVA+K+ N+ + ++F +
Sbjct: 23 RRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKN 80
Query: 318 ECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID 377
E VLR RH N++ + + P A+V ++ SL L+ ++++ ++I
Sbjct: 81 EVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 139
Query: 378 VGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMA 437
++YLH + IIH DLK NI L E++ + DFG+ + S +
Sbjct: 140 TAQGMDYLH----AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSG 195
Query: 438 TIGYMAPE---YGLEGIVSAKCDVYSYGVLLMETFTRKRP 474
+I +MAPE + S + DVY++G++L E T + P
Sbjct: 196 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 235
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 130/295 (44%), Gaps = 35/295 (11%)
Query: 278 NLLGTSSFGSVYKGTIS----DGTDVAIKVFNLQL-ERAFRSFDSECEVLRNVRHRNLIK 332
++G FG V G + VAIK + E+ R F E ++ H N+I+
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 333 ILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSV 392
+ + +V E+M NGSL+ +L H+ +++ + ++ + S ++YL S +
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL----SDM 166
Query: 393 HIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTM-TMATIGYMAPEYGLEGI 451
+H DL NIL++ N+V VSDFG+ ++L + ++ T I + +PE
Sbjct: 167 GFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 452 VSAKCDVYSYGVLLMETFTR-KRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLVREEQ 510
++ DV+SYG++L E + +RP EM +V+ A V E
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERPYWEM-----------------SNQDVIKA--VDEGY 267
Query: 511 AFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKI-----KVKFLDDAAA 560
MDC ++ LDC + + R + L K+ +K + AAA
Sbjct: 268 RLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAA 322
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 107/216 (49%), Gaps = 19/216 (8%)
Query: 269 RATDEFNECNL-----LGTSSFGSV---YKGTISDGTD--VAIKVFNLQLERAFRSFDSE 318
R +F E +L LG +FGSV + D T VA+K E R F+ E
Sbjct: 1 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 60
Query: 319 CEVLRNVRHRNLIK---ILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIM 375
E+L++++H N++K + S + K L++E++P GSL +L H +D ++ L
Sbjct: 61 IEILKSLQHDNIVKYKGVCYSAGRRNLK-LIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 119
Query: 376 IDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVR-QTM 434
+ +EYL + IH DL NIL++ + DFG+ K+L + ++ + +
Sbjct: 120 SQICKGMEYL----GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEP 175
Query: 435 TMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
+ I + APE E S DV+S+GV+L E FT
Sbjct: 176 GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 107/216 (49%), Gaps = 19/216 (8%)
Query: 269 RATDEFNECNL-----LGTSSFGSV---YKGTISDGTD--VAIKVFNLQLERAFRSFDSE 318
R +F E +L LG +FGSV + D T VA+K E R F+ E
Sbjct: 5 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 64
Query: 319 CEVLRNVRHRNLIK---ILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIM 375
E+L++++H N++K + S + K L++E++P GSL +L H +D ++ L
Sbjct: 65 IEILKSLQHDNIVKYKGVCYSAGRRNLK-LIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 123
Query: 376 IDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVR-QTM 434
+ +EYL + IH DL NIL++ + DFG+ K+L + ++ + +
Sbjct: 124 SQICKGMEYL----GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEP 179
Query: 435 TMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
+ I + APE E S DV+S+GV+L E FT
Sbjct: 180 GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 107/216 (49%), Gaps = 19/216 (8%)
Query: 269 RATDEFNECNL-----LGTSSFGSV---YKGTISDGTD--VAIKVFNLQLERAFRSFDSE 318
R +F E +L LG +FGSV + D T VA+K E R F+ E
Sbjct: 2 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 61
Query: 319 CEVLRNVRHRNLIK---ILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIM 375
E+L++++H N++K + S + K L++E++P GSL +L H +D ++ L
Sbjct: 62 IEILKSLQHDNIVKYKGVCYSAGRRNLK-LIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 120
Query: 376 IDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVR-QTM 434
+ +EYL + IH DL NIL++ + DFG+ K+L + ++ + +
Sbjct: 121 SQICKGMEYL----GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEP 176
Query: 435 TMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
+ I + APE E S DV+S+GV+L E FT
Sbjct: 177 GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 107/216 (49%), Gaps = 19/216 (8%)
Query: 269 RATDEFNECNL-----LGTSSFGSV---YKGTISDGTD--VAIKVFNLQLERAFRSFDSE 318
R +F E +L LG +FGSV + D T VA+K E R F+ E
Sbjct: 6 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 65
Query: 319 CEVLRNVRHRNLIK---ILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIM 375
E+L++++H N++K + S + K L++E++P GSL +L H +D ++ L
Sbjct: 66 IEILKSLQHDNIVKYKGVCYSAGRRNLK-LIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 124
Query: 376 IDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVR-QTM 434
+ +EYL + IH DL NIL++ + DFG+ K+L + ++ + +
Sbjct: 125 SQICKGMEYL----GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEP 180
Query: 435 TMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
+ I + APE E S DV+S+GV+L E FT
Sbjct: 181 GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 107/216 (49%), Gaps = 19/216 (8%)
Query: 269 RATDEFNECNL-----LGTSSFGSV---YKGTISDGTD--VAIKVFNLQLERAFRSFDSE 318
R +F E +L LG +FGSV + D T VA+K E R F+ E
Sbjct: 9 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 68
Query: 319 CEVLRNVRHRNLIK---ILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIM 375
E+L++++H N++K + S + K L++E++P GSL +L H +D ++ L
Sbjct: 69 IEILKSLQHDNIVKYKGVCYSAGRRNLK-LIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 127
Query: 376 IDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVR-QTM 434
+ +EYL + IH DL NIL++ + DFG+ K+L + ++ + +
Sbjct: 128 SQICKGMEYL----GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEP 183
Query: 435 TMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
+ I + APE E S DV+S+GV+L E FT
Sbjct: 184 GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 107/216 (49%), Gaps = 19/216 (8%)
Query: 269 RATDEFNECNL-----LGTSSFGSV---YKGTISDGTD--VAIKVFNLQLERAFRSFDSE 318
R +F E +L LG +FGSV + D T VA+K E R F+ E
Sbjct: 7 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 66
Query: 319 CEVLRNVRHRNLIK---ILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIM 375
E+L++++H N++K + S + K L++E++P GSL +L H +D ++ L
Sbjct: 67 IEILKSLQHDNIVKYKGVCYSAGRRNLK-LIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 125
Query: 376 IDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVR-QTM 434
+ +EYL + IH DL NIL++ + DFG+ K+L + ++ + +
Sbjct: 126 SQICKGMEYL----GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEP 181
Query: 435 TMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
+ I + APE E S DV+S+GV+L E FT
Sbjct: 182 GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 107/216 (49%), Gaps = 19/216 (8%)
Query: 269 RATDEFNECNL-----LGTSSFGSV---YKGTISDGTD--VAIKVFNLQLERAFRSFDSE 318
R +F E +L LG +FGSV + D T VA+K E R F+ E
Sbjct: 8 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 67
Query: 319 CEVLRNVRHRNLIK---ILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIM 375
E+L++++H N++K + S + K L++E++P GSL +L H +D ++ L
Sbjct: 68 IEILKSLQHDNIVKYKGVCYSAGRRNLK-LIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 126
Query: 376 IDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVR-QTM 434
+ +EYL + IH DL NIL++ + DFG+ K+L + ++ + +
Sbjct: 127 SQICKGMEYL----GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEP 182
Query: 435 TMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
+ I + APE E S DV+S+GV+L E FT
Sbjct: 183 GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 107/216 (49%), Gaps = 19/216 (8%)
Query: 269 RATDEFNECNL-----LGTSSFGSV---YKGTISDGTD--VAIKVFNLQLERAFRSFDSE 318
R +F E +L LG +FGSV + D T VA+K E R F+ E
Sbjct: 33 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 92
Query: 319 CEVLRNVRHRNLIK---ILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIM 375
E+L++++H N++K + S + K L++E++P GSL +L H +D ++ L
Sbjct: 93 IEILKSLQHDNIVKYKGVCYSAGRRNLK-LIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 151
Query: 376 IDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVR-QTM 434
+ +EYL + IH DL NIL++ + DFG+ K+L + ++ + +
Sbjct: 152 SQICKGMEYL----GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEP 207
Query: 435 TMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
+ I + APE E S DV+S+GV+L E FT
Sbjct: 208 GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 130/295 (44%), Gaps = 35/295 (11%)
Query: 278 NLLGTSSFGSVYKGTIS----DGTDVAIKVFNLQL-ERAFRSFDSECEVLRNVRHRNLIK 332
++G FG V G + VAIK + E+ R F E ++ H N+I+
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 333 ILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSV 392
+ + +V E+M NGSL+ +L H+ +++ + ++ + S ++YL S +
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL----SDM 166
Query: 393 HIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTM-TMATIGYMAPEYGLEGI 451
+H DL NIL++ N+V VSDFG+ ++L + ++ T I + +PE
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 452 VSAKCDVYSYGVLLMETFTR-KRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLVREEQ 510
++ DV+SYG++L E + +RP EM +V+ A V E
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERPYWEM-----------------SNQDVIKA--VDEGY 267
Query: 511 AFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKI-----KVKFLDDAAA 560
MDC ++ LDC + + R + L K+ +K + AAA
Sbjct: 268 RLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAA 322
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 130/295 (44%), Gaps = 35/295 (11%)
Query: 278 NLLGTSSFGSVYKGTIS----DGTDVAIKVFNLQL-ERAFRSFDSECEVLRNVRHRNLIK 332
++G FG V G + VAIK + E+ R F E ++ H N+I+
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 333 ILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSV 392
+ + +V E+M NGSL+ +L H+ +++ + ++ + S ++YL S +
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL----SDM 166
Query: 393 HIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTM-TMATIGYMAPEYGLEGI 451
+H DL NIL++ N+V VSDFG+ ++L + ++ T I + +PE
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 452 VSAKCDVYSYGVLLMETFTR-KRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLVREEQ 510
++ DV+SYG++L E + +RP EM +V+ A V E
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERPYWEM-----------------SNQDVIKA--VDEGY 267
Query: 511 AFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKI-----KVKFLDDAAA 560
MDC ++ LDC + + R + L K+ +K + AAA
Sbjct: 268 RLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAA 322
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 130/295 (44%), Gaps = 35/295 (11%)
Query: 278 NLLGTSSFGSVYKGTIS----DGTDVAIKVFNLQL-ERAFRSFDSECEVLRNVRHRNLIK 332
++G FG V G + VAIK + E+ R F E ++ H N+I+
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 333 ILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSV 392
+ + +V E+M NGSL+ +L H+ +++ + ++ + S ++YL S +
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL----SDM 166
Query: 393 HIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTM-TMATIGYMAPEYGLEGI 451
+H DL NIL++ N+V VSDFG+ ++L + ++ T I + +PE
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 452 VSAKCDVYSYGVLLMETFTR-KRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLVREEQ 510
++ DV+SYG++L E + +RP EM +V+ A V E
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERPYWEM-----------------SNQDVIKA--VDEGY 267
Query: 511 AFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKI-----KVKFLDDAAA 560
MDC ++ LDC + + R + L K+ +K + AAA
Sbjct: 268 RLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAA 322
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 130/295 (44%), Gaps = 35/295 (11%)
Query: 278 NLLGTSSFGSVYKGTIS----DGTDVAIKVFNLQL-ERAFRSFDSECEVLRNVRHRNLIK 332
++G FG V G + VAIK + E+ R F E ++ H N+I+
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 333 ILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSV 392
+ + +V E+M NGSL+ +L H+ +++ + ++ + S ++YL S +
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL----SDM 166
Query: 393 HIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTM-TMATIGYMAPEYGLEGI 451
+H DL NIL++ N+V VSDFG+ ++L + ++ T I + +PE
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 452 VSAKCDVYSYGVLLMETFTR-KRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLVREEQ 510
++ DV+SYG++L E + +RP EM +V+ A V E
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERPYWEM-----------------SNQDVIKA--VDEGY 267
Query: 511 AFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKI-----KVKFLDDAAA 560
MDC ++ LDC + + R + L K+ +K + AAA
Sbjct: 268 RLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAA 322
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 130/295 (44%), Gaps = 35/295 (11%)
Query: 278 NLLGTSSFGSVYKGTIS----DGTDVAIKVFNLQL-ERAFRSFDSECEVLRNVRHRNLIK 332
++G FG V G + VAIK + E+ R F E ++ H N+I+
Sbjct: 49 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 108
Query: 333 ILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSV 392
+ + +V E+M NGSL+ +L H+ +++ + ++ + S ++YL S +
Sbjct: 109 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL----SDM 164
Query: 393 HIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTM-TMATIGYMAPEYGLEGI 451
+H DL NIL++ N+V VSDFG+ ++L + ++ T I + +PE
Sbjct: 165 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 224
Query: 452 VSAKCDVYSYGVLLMETFTR-KRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLVREEQ 510
++ DV+SYG++L E + +RP EM +V+ A V E
Sbjct: 225 FTSASDVWSYGIVLWEVMSYGERPYWEM-----------------SNQDVIKA--VDEGY 265
Query: 511 AFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKI-----KVKFLDDAAA 560
MDC ++ LDC + + R + L K+ +K + AAA
Sbjct: 266 RLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAA 320
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 130/295 (44%), Gaps = 35/295 (11%)
Query: 278 NLLGTSSFGSVYKGTIS----DGTDVAIKVFNLQL-ERAFRSFDSECEVLRNVRHRNLIK 332
++G FG V G + VAIK + E+ R F E ++ H N+I+
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 333 ILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSV 392
+ + +V E+M NGSL+ +L H+ +++ + ++ + S ++YL S +
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL----SDM 166
Query: 393 HIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTM-TMATIGYMAPEYGLEGI 451
+H DL NIL++ N+V VSDFG+ ++L + ++ T I + +PE
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 452 VSAKCDVYSYGVLLMETFTR-KRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLVREEQ 510
++ DV+SYG++L E + +RP EM +V+ A V E
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERPYWEM-----------------SNQDVIKA--VDEGY 267
Query: 511 AFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKI-----KVKFLDDAAA 560
MDC ++ LDC + + R + L K+ +K + AAA
Sbjct: 268 RLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAA 322
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 108/216 (50%), Gaps = 19/216 (8%)
Query: 269 RATDEFNECNL-----LGTSSFGSV---YKGTISDGTD--VAIKVFNLQLERAFRSFDSE 318
R +F E +L LG +FGSV + D T VA+K E R F+ E
Sbjct: 5 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 64
Query: 319 CEVLRNVRHRNLIK---ILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIM 375
E+L++++H N++K + S + K L++E++P GSL +L +H +D ++ L
Sbjct: 65 IEILKSLQHDNIVKYKGVCYSAGRRNLK-LIMEYLPYGSLRDYLQAHAERIDHIKLLQYT 123
Query: 376 IDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVR-QTM 434
+ +EYL + IH DL NIL++ + DFG+ K+L + ++ + +
Sbjct: 124 SQICKGMEYL----GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEP 179
Query: 435 TMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
+ I + APE E S DV+S+GV+L E FT
Sbjct: 180 GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 14/200 (7%)
Query: 280 LGTSSFGSV---YKGTISDGTD--VAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIK-- 332
LG +FGSV + D T VA+K E R F+ E E+L++++H N++K
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 333 -ILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSS 391
+ S + K L++E++P GSL +L H +D ++ L + +EYL +
Sbjct: 96 GVCYSAGRRNLK-LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL----GT 150
Query: 392 VHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVR-QTMTMATIGYMAPEYGLEG 450
IH DL NIL++ + DFG+ K+L + ++ + + + I + APE E
Sbjct: 151 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 210
Query: 451 IVSAKCDVYSYGVLLMETFT 470
S DV+S+GV+L E FT
Sbjct: 211 KFSVASDVWSFGVVLYELFT 230
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 14/200 (7%)
Query: 280 LGTSSFGSV---YKGTISDGTD--VAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIK-- 332
LG +FGSV + D T VA+K E R F+ E E+L++++H N++K
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 333 -ILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSS 391
+ S + K L++E++P GSL +L H +D ++ L + +EYL +
Sbjct: 78 GVCYSAGRRNLK-LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL----GT 132
Query: 392 VHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVR-QTMTMATIGYMAPEYGLEG 450
IH DL NIL++ + DFG+ K+L + ++ + + + I + APE E
Sbjct: 133 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 192
Query: 451 IVSAKCDVYSYGVLLMETFT 470
S DV+S+GV+L E FT
Sbjct: 193 KFSVASDVWSFGVVLYELFT 212
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 130/295 (44%), Gaps = 35/295 (11%)
Query: 278 NLLGTSSFGSVYKGTIS----DGTDVAIKVFNLQL-ERAFRSFDSECEVLRNVRHRNLIK 332
++G FG V G + VAIK + E+ R F E ++ H N+I+
Sbjct: 39 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 98
Query: 333 ILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSV 392
+ + +V E+M NGSL+ +L H+ +++ + ++ + S ++YL S +
Sbjct: 99 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL----SDM 154
Query: 393 HIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTM-TMATIGYMAPEYGLEGI 451
+H DL NIL++ N+V VSDFG+ ++L + ++ T I + +PE
Sbjct: 155 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 214
Query: 452 VSAKCDVYSYGVLLMETFTR-KRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLVREEQ 510
++ DV+SYG++L E + +RP EM +V+ A V E
Sbjct: 215 FTSASDVWSYGIVLWEVMSYGERPYWEM-----------------SNQDVIKA--VDEGY 255
Query: 511 AFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKI-----KVKFLDDAAA 560
MDC ++ LDC + + R + L K+ +K + AAA
Sbjct: 256 RLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAA 310
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 14/200 (7%)
Query: 280 LGTSSFGSV---YKGTISDGTD--VAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIK-- 332
LG +FGSV + D T VA+K E R F+ E E+L++++H N++K
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 333 -ILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSS 391
+ S + K L++E++P GSL +L H +D ++ L + +EYL +
Sbjct: 96 GVCYSAGRRNLK-LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL----GT 150
Query: 392 VHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVR-QTMTMATIGYMAPEYGLEG 450
IH DL NIL++ + DFG+ K+L + ++ + + + I + APE E
Sbjct: 151 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 210
Query: 451 IVSAKCDVYSYGVLLMETFT 470
S DV+S+GV+L E FT
Sbjct: 211 KFSVASDVWSFGVVLYELFT 230
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 106/220 (48%), Gaps = 12/220 (5%)
Query: 260 RRTSYLDIQRATDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQL--ERAFRSFDS 317
RR S D + + +G+ SFG+VYKG DVA+K+ N+ + ++F +
Sbjct: 24 RRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKN 81
Query: 318 ECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID 377
E VLR RH N++ + + P A+V ++ SL L+ ++++ ++I
Sbjct: 82 EVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 140
Query: 378 VGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMA 437
++YLH + IIH DLK NI L E++ + DFG+ S +
Sbjct: 141 TAQGMDYLH----AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSG 196
Query: 438 TIGYMAPE---YGLEGIVSAKCDVYSYGVLLMETFTRKRP 474
+I +MAPE + S + DVY++G++L E T + P
Sbjct: 197 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 106/220 (48%), Gaps = 12/220 (5%)
Query: 260 RRTSYLDIQRATDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQL--ERAFRSFDS 317
RR S D + + +G+ SFG+VYKG DVA+K+ N+ + ++F +
Sbjct: 16 RRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKN 73
Query: 318 ECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID 377
E VLR RH N++ + + P A+V ++ SL L+ ++++ ++I
Sbjct: 74 EVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 132
Query: 378 VGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMA 437
++YLH + IIH DLK NI L E++ + DFG+ S +
Sbjct: 133 TAQGMDYLH----AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSG 188
Query: 438 TIGYMAPE---YGLEGIVSAKCDVYSYGVLLMETFTRKRP 474
+I +MAPE + S + DVY++G++L E T + P
Sbjct: 189 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 228
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 130/295 (44%), Gaps = 35/295 (11%)
Query: 278 NLLGTSSFGSVYKGTIS----DGTDVAIKVFNLQL-ERAFRSFDSECEVLRNVRHRNLIK 332
++G FG V G + VAIK + E+ R F E ++ H N+I+
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 333 ILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSV 392
+ + +V E+M NGSL+ +L H+ +++ + ++ + S ++YL S +
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL----SDM 166
Query: 393 HIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTM-TMATIGYMAPEYGLEGI 451
+H DL NIL++ N+V VSDFG+ ++L + ++ T I + +PE
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 452 VSAKCDVYSYGVLLMETFTR-KRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLVREEQ 510
++ DV+SYG++L E + +RP EM +V+ A V E
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERPYWEM-----------------SNQDVIKA--VDEGY 267
Query: 511 AFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKI-----KVKFLDDAAA 560
MDC ++ LDC + + R + L K+ +K + AAA
Sbjct: 268 RLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAA 322
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 14/200 (7%)
Query: 280 LGTSSFGSV---YKGTISDGTD--VAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIK-- 332
LG +FGSV + D T VA+K E R F+ E E+L++++H N++K
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 333 -ILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSS 391
+ S + K L++E++P GSL +L H +D ++ L + +EYL +
Sbjct: 76 GVCYSAGRRNLK-LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL----GT 130
Query: 392 VHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVR-QTMTMATIGYMAPEYGLEG 450
IH DL NIL++ + DFG+ K+L + ++ + + + I + APE E
Sbjct: 131 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 190
Query: 451 IVSAKCDVYSYGVLLMETFT 470
S DV+S+GV+L E FT
Sbjct: 191 KFSVASDVWSFGVVLYELFT 210
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 101/200 (50%), Gaps = 12/200 (6%)
Query: 280 LGTSSFGSVYKGTISDGTDVAIKVFNLQLE--RAFRSFDSECEVLRNVRHRNLIKILSSY 337
+G+ SFG+VYKG DVA+K+ N+ + ++F +E VLR RH N++ +
Sbjct: 21 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 338 SNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHC 397
+ P A+V ++ SL L+ ++++ ++I ++YLH + IIH
Sbjct: 79 TKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH----AKSIIHR 133
Query: 398 DLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPE---YGLEGIVSA 454
DLK NI L E++ + DFG+ + S + +I +MAPE + S
Sbjct: 134 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 193
Query: 455 KCDVYSYGVLLMETFTRKRP 474
+ DVY++G++L E T + P
Sbjct: 194 QSDVYAFGIVLYELMTGQLP 213
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 130/295 (44%), Gaps = 35/295 (11%)
Query: 278 NLLGTSSFGSVYKGTIS----DGTDVAIKVFNLQL-ERAFRSFDSECEVLRNVRHRNLIK 332
++G FG V G + VAIK + E+ R F E ++ H N+I+
Sbjct: 22 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 81
Query: 333 ILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSV 392
+ + +V E+M NGSL+ +L H+ +++ + ++ + S ++YL S +
Sbjct: 82 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL----SDM 137
Query: 393 HIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTM-TMATIGYMAPEYGLEGI 451
+H DL NIL++ N+V VSDFG+ ++L + ++ T I + +PE
Sbjct: 138 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 197
Query: 452 VSAKCDVYSYGVLLMETFTR-KRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLVREEQ 510
++ DV+SYG++L E + +RP EM +V+ A V E
Sbjct: 198 FTSASDVWSYGIVLWEVMSYGERPYWEM-----------------SNQDVIKA--VDEGY 238
Query: 511 AFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKI-----KVKFLDDAAA 560
MDC ++ LDC + + R + L K+ +K + AAA
Sbjct: 239 RLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAA 293
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 101/200 (50%), Gaps = 12/200 (6%)
Query: 280 LGTSSFGSVYKGTISDGTDVAIKVFNLQLE--RAFRSFDSECEVLRNVRHRNLIKILSSY 337
+G+ SFG+VYKG DVA+K+ N+ + ++F +E VLR RH N++ +
Sbjct: 21 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 338 SNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHC 397
+ P A+V ++ SL L+ ++++ ++I ++YLH + IIH
Sbjct: 79 TKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH----AKSIIHR 133
Query: 398 DLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPE---YGLEGIVSA 454
DLK NI L E++ + DFG+ + S + +I +MAPE + S
Sbjct: 134 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 193
Query: 455 KCDVYSYGVLLMETFTRKRP 474
+ DVY++G++L E T + P
Sbjct: 194 QSDVYAFGIVLYELMTGQLP 213
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 101/200 (50%), Gaps = 12/200 (6%)
Query: 280 LGTSSFGSVYKGTISDGTDVAIKVFNLQLE--RAFRSFDSECEVLRNVRHRNLIKILSSY 337
+G+ SFG+VYKG DVA+K+ N+ + ++F +E VLR RH N++ +
Sbjct: 18 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 75
Query: 338 SNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHC 397
+ P A+V ++ SL L+ ++++ ++I ++YLH + IIH
Sbjct: 76 TKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH----AKSIIHR 130
Query: 398 DLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPE---YGLEGIVSA 454
DLK NI L E++ + DFG+ + S + +I +MAPE + S
Sbjct: 131 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 190
Query: 455 KCDVYSYGVLLMETFTRKRP 474
+ DVY++G++L E T + P
Sbjct: 191 QSDVYAFGIVLYELMTGQLP 210
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 128/284 (45%), Gaps = 37/284 (13%)
Query: 278 NLLGTSSFGSVYKG---TISDGTDVAIKVFNLQL---ERAFRSFDSECEVLRNVRHRNLI 331
++G FG VYKG T S +V + + L+ E+ F E ++ H N+I
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNII 109
Query: 332 KILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSS 391
++ S ++ E+M NG+L+K+L + +L+ + ++ + + ++YL N
Sbjct: 110 RLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLAN---- 165
Query: 392 VHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMA----TIGYMAPEYG 447
++ +H DL NIL++ N+V VSDFG+ ++L ED T T + I + APE
Sbjct: 166 MNYVHRDLAARNILVNSNLVCKVSDFGLSRVL---EDDPEATYTTSGGKIPIRWTAPEAI 222
Query: 448 LEGIVSAKCDVYSYGVLLMETFTR-KRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLV 506
++ DV+S+G+++ E T +RP E+ E V +++ G
Sbjct: 223 SYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHE------VMKAINDGFR-------- 268
Query: 507 REEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKI 550
MDC +I + C + R D + L K+
Sbjct: 269 -----LPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKL 307
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 101/200 (50%), Gaps = 12/200 (6%)
Query: 280 LGTSSFGSVYKGTISDGTDVAIKVFNLQLE--RAFRSFDSECEVLRNVRHRNLIKILSSY 337
+G+ SFG+VYKG DVA+K+ N+ + ++F +E VLR RH N++ +
Sbjct: 16 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 338 SNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHC 397
+ P A+V ++ SL L+ ++++ ++I ++YLH + IIH
Sbjct: 74 TKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH----AKSIIHR 128
Query: 398 DLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPE---YGLEGIVSA 454
DLK NI L E++ + DFG+ + S + +I +MAPE + S
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 188
Query: 455 KCDVYSYGVLLMETFTRKRP 474
+ DVY++G++L E T + P
Sbjct: 189 QSDVYAFGIVLYELMTGQLP 208
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 14/200 (7%)
Query: 280 LGTSSFGSV---YKGTISDGTD--VAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIK-- 332
LG +FGSV + D T VA+K E R F+ E E+L++++H N++K
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 333 -ILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSS 391
+ S + K L++E++P GSL +L H +D ++ L + +EYL +
Sbjct: 78 GVCYSAGRRNLK-LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL----GT 132
Query: 392 VHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVR-QTMTMATIGYMAPEYGLEG 450
IH DL NIL++ + DFG+ K+L + ++ + + + I + APE E
Sbjct: 133 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTES 192
Query: 451 IVSAKCDVYSYGVLLMETFT 470
S DV+S+GV+L E FT
Sbjct: 193 KFSVASDVWSFGVVLYELFT 212
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 101/200 (50%), Gaps = 12/200 (6%)
Query: 280 LGTSSFGSVYKGTISDGTDVAIKVFNLQLE--RAFRSFDSECEVLRNVRHRNLIKILSSY 337
+G+ SFG+VYKG DVA+K+ N+ + ++F +E VLR RH N++ +
Sbjct: 16 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 338 SNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHC 397
+ P A+V ++ SL L+ ++++ ++I ++YLH + IIH
Sbjct: 74 TAPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH----AKSIIHR 128
Query: 398 DLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPE---YGLEGIVSA 454
DLK NI L E++ + DFG+ + S + +I +MAPE + S
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 188
Query: 455 KCDVYSYGVLLMETFTRKRP 474
+ DVY++G++L E T + P
Sbjct: 189 QSDVYAFGIVLYELMTGQLP 208
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 118/258 (45%), Gaps = 35/258 (13%)
Query: 270 ATDEFNECNLLGTSSFGSVYKGT-ISDGTDVAIKVFNL-------QLERAFRSFDSECEV 321
A +E +G FG V+KG + D + VAIK L ++ F+ F E +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 322 LRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSA 381
+ N+ H N++K+ NP +V+EF+P G L L + + +L +M+D+
Sbjct: 77 MSNLNHPNIVKLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALG 134
Query: 382 LEYLHNGHSSVHIIHCDLKPTNIL---LDEN--MVAHVSDFGIYKLLGEGEDSVRQ-TMT 435
+EY+ N + I+H DL+ NI LDEN + A V+DFG+ + SV +
Sbjct: 135 IEYMQNQNPP--IVHRDLRSPNIFLQSLDENAPVCAKVADFGL------SQQSVHSVSGL 186
Query: 436 MATIGYMAPEY--GLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIG---------EMS 484
+ +MAPE E + K D YS+ ++L T + P DE G E
Sbjct: 187 LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEG 246
Query: 485 LRRWVKESLPHGLTEVVD 502
LR + E P L V++
Sbjct: 247 LRPTIPEDCPPRLRNVIE 264
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 129/295 (43%), Gaps = 35/295 (11%)
Query: 278 NLLGTSSFGSVYKGTIS----DGTDVAIKVFNLQL-ERAFRSFDSECEVLRNVRHRNLIK 332
++G FG V G + VAIK + E+ R F E ++ H N+I+
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 333 ILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSV 392
+ + +V E M NGSL+ +L H+ +++ + ++ + S ++YL S +
Sbjct: 111 LEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL----SDM 166
Query: 393 HIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTM-TMATIGYMAPEYGLEGI 451
+H DL NIL++ N+V VSDFG+ ++L + ++ T I + +PE
Sbjct: 167 GAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 452 VSAKCDVYSYGVLLMETFTR-KRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLVREEQ 510
++ DV+SYG++L E + +RP EM +V+ A V E
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERPYWEM-----------------SNQDVIKA--VDEGY 267
Query: 511 AFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKI-----KVKFLDDAAA 560
MDC ++ LDC + + R + L K+ +K + AAA
Sbjct: 268 RLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAA 322
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 129/295 (43%), Gaps = 35/295 (11%)
Query: 278 NLLGTSSFGSVYKGTIS----DGTDVAIKVFNLQL-ERAFRSFDSECEVLRNVRHRNLIK 332
++G FG V G + VAIK + E+ R F E ++ H N+I+
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 333 ILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSV 392
+ + +V E M NGSL+ +L H+ +++ + ++ + S ++YL S +
Sbjct: 111 LEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL----SDM 166
Query: 393 HIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTM-TMATIGYMAPEYGLEGI 451
+H DL NIL++ N+V VSDFG+ ++L + ++ T I + +PE
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 452 VSAKCDVYSYGVLLMETFTR-KRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLVREEQ 510
++ DV+SYG++L E + +RP EM +V+ A V E
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERPYWEM-----------------SNQDVIKA--VDEGY 267
Query: 511 AFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKI-----KVKFLDDAAA 560
MDC ++ LDC + + R + L K+ +K + AAA
Sbjct: 268 RLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAA 322
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 100/200 (50%), Gaps = 12/200 (6%)
Query: 280 LGTSSFGSVYKGTISDGTDVAIKVFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSY 337
+G+ SFG+VYKG DVA+K+ N+ + ++F +E VLR RH N++ +
Sbjct: 16 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 338 SNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHC 397
+ P A+V ++ SL L+ ++++ ++I ++YLH + IIH
Sbjct: 74 TKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH----AKSIIHR 128
Query: 398 DLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPE---YGLEGIVSA 454
DLK NI L E++ + DFG+ S + +I +MAPE + S
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 188
Query: 455 KCDVYSYGVLLMETFTRKRP 474
+ DVY++G++L E T + P
Sbjct: 189 QSDVYAFGIVLYELMTGQLP 208
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 99/200 (49%), Gaps = 12/200 (6%)
Query: 280 LGTSSFGSVYKGTISDGTDVAIKVFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSY 337
+G+ SFG+VYKG DVA+K+ N+ + ++F +E VLR RH N++ +
Sbjct: 20 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 77
Query: 338 SNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHC 397
+ P A+V ++ SL L++ ++ + ++I ++YLH + IIH
Sbjct: 78 TKPQL-AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH----AKSIIHR 132
Query: 398 DLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPE---YGLEGIVSA 454
DLK NI L E+ + DFG+ + S + +I +MAPE S
Sbjct: 133 DLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSF 192
Query: 455 KCDVYSYGVLLMETFTRKRP 474
+ DVY++G++L E T + P
Sbjct: 193 QSDVYAFGIVLYELMTGQLP 212
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 129/295 (43%), Gaps = 35/295 (11%)
Query: 278 NLLGTSSFGSVYKGTIS----DGTDVAIKVFNLQL-ERAFRSFDSECEVLRNVRHRNLIK 332
++G FG V G + VAIK + E+ R F E ++ H N+I+
Sbjct: 22 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 81
Query: 333 ILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSV 392
+ + +V E M NGSL+ +L H+ +++ + ++ + S ++YL S +
Sbjct: 82 LEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL----SDM 137
Query: 393 HIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTM-TMATIGYMAPEYGLEGI 451
+H DL NIL++ N+V VSDFG+ ++L + ++ T I + +PE
Sbjct: 138 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 197
Query: 452 VSAKCDVYSYGVLLMETFTR-KRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLVREEQ 510
++ DV+SYG++L E + +RP EM +V+ A V E
Sbjct: 198 FTSASDVWSYGIVLWEVMSYGERPYWEM-----------------SNQDVIKA--VDEGY 238
Query: 511 AFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKI-----KVKFLDDAAA 560
MDC ++ LDC + + R + L K+ +K + AAA
Sbjct: 239 RLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAA 293
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 107/216 (49%), Gaps = 19/216 (8%)
Query: 269 RATDEFNECNL-----LGTSSFGSV---YKGTISDGTD--VAIKVFNLQLERAFRSFDSE 318
R +F E +L LG +FGSV + D T VA+K E R F+ E
Sbjct: 3 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 62
Query: 319 CEVLRNVRHRNLIK---ILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIM 375
E+L++++H N++K + S + K L++E++P GSL +L H +D ++ L
Sbjct: 63 IEILKSLQHDNIVKYKGVCYSAGRRNLK-LIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 121
Query: 376 IDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVR-QTM 434
+ +EYL + IH +L NIL++ + DFG+ K+L + ++ + +
Sbjct: 122 SQICKGMEYL----GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEP 177
Query: 435 TMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
+ I + APE E S DV+S+GV+L E FT
Sbjct: 178 GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 117/258 (45%), Gaps = 35/258 (13%)
Query: 270 ATDEFNECNLLGTSSFGSVYKGT-ISDGTDVAIKVFNL-------QLERAFRSFDSECEV 321
A +E +G FG V+KG + D + VAIK L ++ F+ F E +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 322 LRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSA 381
+ N+ H N++K+ NP +V+EF+P G L L + + +L +M+D+
Sbjct: 77 MSNLNHPNIVKLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALG 134
Query: 382 LEYLHNGHSSVHIIHCDLKPTNIL---LDEN--MVAHVSDFGIYKLLGEGEDSVRQ-TMT 435
+EY+ N + I+H DL+ NI LDEN + A V+DFG + SV +
Sbjct: 135 IEYMQNQNPP--IVHRDLRSPNIFLQSLDENAPVCAKVADFGT------SQQSVHSVSGL 186
Query: 436 MATIGYMAPEY--GLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIG---------EMS 484
+ +MAPE E + K D YS+ ++L T + P DE G E
Sbjct: 187 LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEG 246
Query: 485 LRRWVKESLPHGLTEVVD 502
LR + E P L V++
Sbjct: 247 LRPTIPEDCPPRLRNVIE 264
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 134/304 (44%), Gaps = 39/304 (12%)
Query: 263 SYLDIQRATDEFNE-----C----NLLGTSSFGSVYKGTIS--DGTDVAIKVFNLQL--- 308
+Y D RA +F + C ++G FG V G + DVA+ + L++
Sbjct: 25 TYEDPNRAVHQFAKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYT 84
Query: 309 ERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDI 368
E+ R F E ++ H N++ + + +V+EFM NG+L+ +L H+ +
Sbjct: 85 EKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTV 144
Query: 369 LERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGED 428
++ + ++ + + + YL + + +H DL NIL++ N+V VSDFG+ +++ + +
Sbjct: 145 IQLVGMLRGIAAGMRYL----ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPE 200
Query: 429 SVRQTM-TMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTR-KRPTDEMFIGEMSLR 486
+V T + + APE ++ DV+SYG+++ E + +RP +M
Sbjct: 201 AVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDM-------- 252
Query: 487 RWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546
+V+ A + E A MDC + LDC + R
Sbjct: 253 ---------SNQDVIKA--IEEGYRLPAPMDCPAGLHQLMLDCWQKERAERPKFEQIVGI 301
Query: 547 LKKI 550
L K+
Sbjct: 302 LDKM 305
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 126/281 (44%), Gaps = 32/281 (11%)
Query: 279 LLGTSSFGSVYKGTIS----DGTDVAIKVFNLQL-ERAFRSFDSECEVLRNVRHRNLIKI 333
++G FG V +G + + VAIK ER R F SE ++ H N+I++
Sbjct: 23 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 82
Query: 334 LSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVH 393
+N ++ EFM NG+L+ +L ++ +++ + ++ + S + YL + +
Sbjct: 83 EGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYL----AEMS 138
Query: 394 IIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMA---TIGYMAPEYGLEG 450
+H DL NIL++ N+V VSDFG+ + L E +T ++ I + APE
Sbjct: 139 YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFR 198
Query: 451 IVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLVREE 509
++ D +SYG+++ E + +RP +M +V++A + ++
Sbjct: 199 KFTSASDAWSYGIVMWEVMSFGERPYWDM-----------------SNQDVINA--IEQD 239
Query: 510 QAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKI 550
DC S+ LDC + + R + L K+
Sbjct: 240 YRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKM 280
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 121/285 (42%), Gaps = 45/285 (15%)
Query: 280 LGTSSFGSVYKGT------ISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKI 333
LG +FG V+ D VA+K A + F E E+L N++H +++K
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 334 LSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDIL---------------ERLNIMIDV 378
+ D +V E+M +G L K+L +H IL + L+I +
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 379 GSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMAT 438
S + YL +S H +H DL N L+ N++ + DFG+ + + + TM
Sbjct: 143 ASGMVYL----ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLP 198
Query: 439 IGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTR-KRPTDEMFIGEMSLRRWVKESLPHGL 497
I +M PE + + + DV+S+GV+L E FT K+P W + S
Sbjct: 199 IRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP-------------WFQLS----N 241
Query: 498 TEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTD 542
TEV++ + + + C + D L C P R+N+ +
Sbjct: 242 TEVIEC--ITQGRVLERPRVCPKEVYDVMLGCWQREPQQRLNIKE 284
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 98/200 (49%), Gaps = 12/200 (6%)
Query: 280 LGTSSFGSVYKGTISDGTDVAIKVFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSY 337
+G+ SFG+VYKG DVA+K+ N+ + ++F +E VLR RH N++ +
Sbjct: 32 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 338 SNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHC 397
+ P A+V ++ SL L++ ++ + ++I ++YLH + IIH
Sbjct: 90 TKPQL-AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH----AKSIIHR 144
Query: 398 DLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPE---YGLEGIVSA 454
DLK NI L E+ + DFG+ S + +I +MAPE S
Sbjct: 145 DLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSF 204
Query: 455 KCDVYSYGVLLMETFTRKRP 474
+ DVY++G++L E T + P
Sbjct: 205 QSDVYAFGIVLYELMTGQLP 224
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 98/200 (49%), Gaps = 12/200 (6%)
Query: 280 LGTSSFGSVYKGTISDGTDVAIKVFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSY 337
+G+ SFG+VYKG DVA+K+ N+ + ++F +E VLR RH N++ +
Sbjct: 32 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 338 SNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHC 397
+ P A+V ++ SL L++ ++ + ++I ++YLH + IIH
Sbjct: 90 TAPQL-AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH----AKSIIHR 144
Query: 398 DLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPE---YGLEGIVSA 454
DLK NI L E+ + DFG+ S + +I +MAPE S
Sbjct: 145 DLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSF 204
Query: 455 KCDVYSYGVLLMETFTRKRP 474
+ DVY++G++L E T + P
Sbjct: 205 QSDVYAFGIVLYELMTGQLP 224
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 117/258 (45%), Gaps = 35/258 (13%)
Query: 270 ATDEFNECNLLGTSSFGSVYKGT-ISDGTDVAIKVFNL-------QLERAFRSFDSECEV 321
A +E +G FG V+KG + D + VAIK L ++ F+ F E +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 322 LRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSA 381
+ N+ H N++K+ NP +V+EF+P G L L + + +L +M+D+
Sbjct: 77 MSNLNHPNIVKLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALG 134
Query: 382 LEYLHNGHSSVHIIHCDLKPTNIL---LDEN--MVAHVSDFGIYKLLGEGEDSVRQ-TMT 435
+EY+ N + I+H DL+ NI LDEN + A V+DF + + SV +
Sbjct: 135 IEYMQNQNPP--IVHRDLRSPNIFLQSLDENAPVCAKVADFSL------SQQSVHSVSGL 186
Query: 436 MATIGYMAPEY--GLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIG---------EMS 484
+ +MAPE E + K D YS+ ++L T + P DE G E
Sbjct: 187 LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEG 246
Query: 485 LRRWVKESLPHGLTEVVD 502
LR + E P L V++
Sbjct: 247 LRPTIPEDCPPRLRNVIE 264
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 125/282 (44%), Gaps = 32/282 (11%)
Query: 278 NLLGTSSFGSVYKGTIS----DGTDVAIKVFNLQL-ERAFRSFDSECEVLRNVRHRNLIK 332
++G FG V +G + + VAIK ER R F SE ++ H N+I+
Sbjct: 20 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIR 79
Query: 333 ILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSV 392
+ +N ++ EFM NG+L+ +L ++ +++ + ++ + S + YL + +
Sbjct: 80 LEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYL----AEM 135
Query: 393 HIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMA---TIGYMAPEYGLE 449
+H DL NIL++ N+V VSDFG+ + L E T ++ I + APE
Sbjct: 136 SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAF 195
Query: 450 GIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLVRE 508
++ D +SYG+++ E + +RP +M +V++A + +
Sbjct: 196 RKFTSASDAWSYGIVMWEVMSFGERPYWDM-----------------SNQDVINA--IEQ 236
Query: 509 EQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKI 550
+ DC S+ LDC + + R + L K+
Sbjct: 237 DYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKM 278
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 95/204 (46%), Gaps = 14/204 (6%)
Query: 278 NLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSY 337
++G +FG V K DVAIK + ER ++F E L V H N++K+ +
Sbjct: 15 EVVGRGAFGVVCKAKWR-AKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGAC 71
Query: 338 SNPDFKALVLEFMPNGSLEKWLYSHNY--FLDILERLNIMIDVGSALEYLHNGHSSVHII 395
NP LV+E+ GSL L+ + ++ + + YLH+ +I
Sbjct: 72 LNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA-LI 128
Query: 396 HCDLKPTNILL-DENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSA 454
H DLKP N+LL V + DFG + T + +MAPE S
Sbjct: 129 HRDLKPPNLLLVAGGTVLKICDFGT-----ACDIQTHMTNNKGSAAWMAPEVFEGSNYSE 183
Query: 455 KCDVYSYGVLLMETFTRKRPTDEM 478
KCDV+S+G++L E TR++P DE+
Sbjct: 184 KCDVFSWGIILWEVITRRKPFDEI 207
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 95/204 (46%), Gaps = 14/204 (6%)
Query: 278 NLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSY 337
++G +FG V K DVAIK + ER ++F E L V H N++K+ +
Sbjct: 14 EVVGRGAFGVVCKAKWR-AKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGAC 70
Query: 338 SNPDFKALVLEFMPNGSLEKWLYSHNY--FLDILERLNIMIDVGSALEYLHNGHSSVHII 395
NP LV+E+ GSL L+ + ++ + + YLH+ +I
Sbjct: 71 LNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA-LI 127
Query: 396 HCDLKPTNILL-DENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSA 454
H DLKP N+LL V + DFG + T + +MAPE S
Sbjct: 128 HRDLKPPNLLLVAGGTVLKICDFGT-----ACDIQTHMTNNKGSAAWMAPEVFEGSNYSE 182
Query: 455 KCDVYSYGVLLMETFTRKRPTDEM 478
KCDV+S+G++L E TR++P DE+
Sbjct: 183 KCDVFSWGIILWEVITRRKPFDEI 206
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 98/205 (47%), Gaps = 18/205 (8%)
Query: 273 EFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIK 332
E +G FG V G G VA+K ++ + ++F +E V+ +RH NL++
Sbjct: 13 ELKLLQTIGKGEFGDVMLGDYR-GNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQ 69
Query: 333 ILSS-YSNPDFKALVLEFMPNGSLEKWLYSHNYFL---DILERLNIMIDVGSALEYLHNG 388
+L +V E+M GSL +L S + D L L +DV A+EYL
Sbjct: 70 LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL--LKFSLDVCEAMEYLEGN 127
Query: 389 HSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGL 448
+ +H DL N+L+ E+ VA VSDFG+ K E S Q + + APE
Sbjct: 128 ----NFVHRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALR 178
Query: 449 EGIVSAKCDVYSYGVLLMETFTRKR 473
E S K DV+S+G+LL E ++ R
Sbjct: 179 EAAFSTKSDVWSFGILLWEIYSFGR 203
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 133/304 (43%), Gaps = 39/304 (12%)
Query: 263 SYLDIQRATDEFNE-----C----NLLGTSSFGSVYKGTIS----DGTDVAIKVFNLQL- 308
+Y D +A EF + C ++G FG V G + VAIK +
Sbjct: 4 TYEDPNQAVHEFAKEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYT 63
Query: 309 ERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDI 368
E+ R F E ++ H N+I + + +V E+M NGSL+ +L ++ +
Sbjct: 64 EKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTV 123
Query: 369 LERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGED 428
++ + ++ + + ++YL S + +H DL NIL++ N+V VSDFG+ ++L + +
Sbjct: 124 IQLVGMLRGISAGMKYL----SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE 179
Query: 429 SVRQTM-TMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTR-KRPTDEMFIGEMSLR 486
+ T I + APE ++ DV+SYG+++ E + +RP EM
Sbjct: 180 AAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEM-------- 231
Query: 487 RWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546
+V+ A V E + MDC ++ LDC + + R +
Sbjct: 232 ---------TNQDVIKA--VEEGYRLPSPMDCPAALYQLMLDCWQKERNSRPKFDEIVNM 280
Query: 547 LKKI 550
L K+
Sbjct: 281 LDKL 284
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 118/280 (42%), Gaps = 42/280 (15%)
Query: 280 LGTSSFGSVYKGTI------SDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKI 333
LG +FG V+ D VA+K + A + F E E+L N++H +++K
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 334 LSSYSNPDFKALVLEFMPNGSLEKWLYSHN------------YFLDILERLNIMIDVGSA 381
D +V E+M +G L K+L +H L + L+I + +
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAG 140
Query: 382 LEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGY 441
+ YL +S H +H DL N L+ EN++ + DFG+ + + + TM I +
Sbjct: 141 MVYL----ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRW 196
Query: 442 MAPEYGLEGIVSAKCDVYSYGVLLMETFTR-KRPTDEMFIGEMSLRRWVKESLPHGLTEV 500
M PE + + + DV+S GV+L E FT K+P W + S EV
Sbjct: 197 MPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP-------------WYQLS----NNEV 239
Query: 501 VDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINM 540
++ + + + C + + L C P MR N+
Sbjct: 240 IEC--ITQGRVLQRPRTCPQEVYELMLGCWQREPHMRKNI 277
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 126/278 (45%), Gaps = 36/278 (12%)
Query: 278 NLLGTSSFGSVYKG--TISDGTDVAIKVFNLQL---ERAFRSFDSECEVLRNVRHRNLIK 332
++G FG V G + ++ + + L+ ++ R F SE ++ H N+I
Sbjct: 35 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 94
Query: 333 ILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSV 392
+ + ++ E+M NGSL+ +L ++ +++ + ++ +GS ++YL S +
Sbjct: 95 LEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYL----SDM 150
Query: 393 HIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTM-TMATIGYMAPEYGLEGI 451
+H DL NIL++ N+V VSDFG+ ++L + ++ T I + APE
Sbjct: 151 SAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRK 210
Query: 452 VSAKCDVYSYGVLLMETFTR-KRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLVREEQ 510
++ DV+SYG+++ E + +RP +M +V+ A + E
Sbjct: 211 FTSASDVWSYGIVMWEVMSYGERPYWDM-----------------SNQDVIKA--IEEGY 251
Query: 511 AFSAKMDCILSIMDFALDCCMESPDMR------INMTD 542
MDC +++ LDC + R +NM D
Sbjct: 252 RLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLD 289
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 126/278 (45%), Gaps = 36/278 (12%)
Query: 278 NLLGTSSFGSVYKG--TISDGTDVAIKVFNLQL---ERAFRSFDSECEVLRNVRHRNLIK 332
++G FG V G + ++ + + L+ ++ R F SE ++ H N+I
Sbjct: 14 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 73
Query: 333 ILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSV 392
+ + ++ E+M NGSL+ +L ++ +++ + ++ +GS ++YL S +
Sbjct: 74 LEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYL----SDM 129
Query: 393 HIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTM-TMATIGYMAPEYGLEGI 451
+H DL NIL++ N+V VSDFG+ ++L + ++ T I + APE
Sbjct: 130 SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRK 189
Query: 452 VSAKCDVYSYGVLLMETFTR-KRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLVREEQ 510
++ DV+SYG+++ E + +RP +M +V+ A + E
Sbjct: 190 FTSASDVWSYGIVMWEVMSYGERPYWDM-----------------SNQDVIKA--IEEGY 230
Query: 511 AFSAKMDCILSIMDFALDCCMESPDMR------INMTD 542
MDC +++ LDC + R +NM D
Sbjct: 231 RLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLD 268
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 126/278 (45%), Gaps = 36/278 (12%)
Query: 278 NLLGTSSFGSVYKG--TISDGTDVAIKVFNLQL---ERAFRSFDSECEVLRNVRHRNLIK 332
++G FG V G + ++ + + L+ ++ R F SE ++ H N+I
Sbjct: 20 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 79
Query: 333 ILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSV 392
+ + ++ E+M NGSL+ +L ++ +++ + ++ +GS ++YL S +
Sbjct: 80 LEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYL----SDM 135
Query: 393 HIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTM-TMATIGYMAPEYGLEGI 451
+H DL NIL++ N+V VSDFG+ ++L + ++ T I + APE
Sbjct: 136 SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRK 195
Query: 452 VSAKCDVYSYGVLLMETFTR-KRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLVREEQ 510
++ DV+SYG+++ E + +RP +M +V+ A + E
Sbjct: 196 FTSASDVWSYGIVMWEVMSYGERPYWDM-----------------SNQDVIKA--IEEGY 236
Query: 511 AFSAKMDCILSIMDFALDCCMESPDMR------INMTD 542
MDC +++ LDC + R +NM D
Sbjct: 237 RLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLD 274
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 111/241 (46%), Gaps = 12/241 (4%)
Query: 273 EFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLE-----RAFRSFDSECEVLRNVR 326
EF + +LG+ +FG+VYKG I +G V I V ++L +A + E V+ +V
Sbjct: 50 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVD 109
Query: 327 HRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLH 386
+ ++ ++L + L+ + MP G L ++ H + LN + + + YL
Sbjct: 110 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 168
Query: 387 NGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEY 446
+ ++H DL N+L+ ++DFG+ KLLG E I +MA E
Sbjct: 169 DRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 224
Query: 447 GLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANL 505
L I + + DV+SYGV + E T +P D + E+S E LP +D +
Sbjct: 225 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYM 284
Query: 506 V 506
+
Sbjct: 285 I 285
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 98/205 (47%), Gaps = 18/205 (8%)
Query: 273 EFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIK 332
E +G FG V G G VA+K ++ + ++F +E V+ +RH NL++
Sbjct: 7 ELKLLQTIGKGEFGDVMLGDYR-GNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQ 63
Query: 333 ILSSYSNPDFK-ALVLEFMPNGSLEKWLYSHNYFL---DILERLNIMIDVGSALEYLHNG 388
+L +V E+M GSL +L S + D L L +DV A+EYL
Sbjct: 64 LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL--LKFSLDVCEAMEYLEGN 121
Query: 389 HSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGL 448
+ +H DL N+L+ E+ VA VSDFG+ K E S Q + + APE
Sbjct: 122 ----NFVHRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALR 172
Query: 449 EGIVSAKCDVYSYGVLLMETFTRKR 473
E S K DV+S+G+LL E ++ R
Sbjct: 173 EKKFSTKSDVWSFGILLWEIYSFGR 197
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 95/193 (49%), Gaps = 6/193 (3%)
Query: 280 LGTSSFGSVYKGTI-SDGTDVAIKVFNLQLERAFRS-FDSECEVLRNVRHRNLIKILSSY 337
+G +FG V+ G + +D T VA+K L ++ F E +L+ H N+++++
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 338 SNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHC 397
+ +V+E + G +L + L + L ++ D + +EYL S IH
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYL----ESKCCIHR 237
Query: 398 DLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCD 457
DL N L+ E V +SDFG+ + +G + + + + APE G S++ D
Sbjct: 238 DLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESD 297
Query: 458 VYSYGVLLMETFT 470
V+S+G+LL ETF+
Sbjct: 298 VWSFGILLWETFS 310
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 98/205 (47%), Gaps = 18/205 (8%)
Query: 273 EFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIK 332
E +G FG V G G VA+K ++ + ++F +E V+ +RH NL++
Sbjct: 22 ELKLLQTIGKGEFGDVMLGDYR-GNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQ 78
Query: 333 ILSS-YSNPDFKALVLEFMPNGSLEKWLYSHNYFL---DILERLNIMIDVGSALEYLHNG 388
+L +V E+M GSL +L S + D L L +DV A+EYL
Sbjct: 79 LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL--LKFSLDVCEAMEYLEGN 136
Query: 389 HSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGL 448
+ +H DL N+L+ E+ VA VSDFG+ K E S Q + + APE
Sbjct: 137 ----NFVHRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALR 187
Query: 449 EGIVSAKCDVYSYGVLLMETFTRKR 473
E S K DV+S+G+LL E ++ R
Sbjct: 188 EKKFSTKSDVWSFGILLWEIYSFGR 212
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 111/241 (46%), Gaps = 12/241 (4%)
Query: 273 EFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLE-----RAFRSFDSECEVLRNVR 326
EF + +LG+ +FG+VYKG I +G V I V +L +A + E V+ +V
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 327 HRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLH 386
+ ++ ++L + L+++ MP G L ++ H + LN + + + YL
Sbjct: 80 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 138
Query: 387 NGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEY 446
+ ++H DL N+L+ ++DFG+ KLLG E I +MA E
Sbjct: 139 DRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 194
Query: 447 GLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANL 505
L I + + DV+SYGV + E T +P D + E+S E LP +D +
Sbjct: 195 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYM 254
Query: 506 V 506
+
Sbjct: 255 I 255
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 111/241 (46%), Gaps = 12/241 (4%)
Query: 273 EFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLE-----RAFRSFDSECEVLRNVR 326
EF + +LG+ +FG+VYKG I +G V I V +L +A + E V+ +V
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 327 HRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLH 386
+ ++ ++L + L+++ MP G L ++ H + LN + + + YL
Sbjct: 79 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 137
Query: 387 NGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEY 446
+ ++H DL N+L+ ++DFG+ KLLG E I +MA E
Sbjct: 138 DRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 193
Query: 447 GLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANL 505
L I + + DV+SYGV + E T +P D + E+S E LP +D +
Sbjct: 194 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYM 253
Query: 506 V 506
+
Sbjct: 254 I 254
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 98/199 (49%), Gaps = 37/199 (18%)
Query: 1 MRILTLEGNQLSGRLPSTI------------------GHSLPNI--------EYLLLTAN 34
+++L L N+ SG LP ++ G LPN+ + L L N
Sbjct: 345 LKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNN 404
Query: 35 NLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLLMFGIRLTGNKLYGR 94
TG IP +++N ++L+ L L FN SG I ++ G+L L L L + N L G
Sbjct: 405 GFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWL-------NMLEGE 457
Query: 95 IPPCLV----LTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIPESVGSLISLE 150
IP L+ L L + N L+G+IPS + +L +SL++N+ G IP+ +G L +L
Sbjct: 458 IPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLA 517
Query: 151 SLDLSGNNLSGKIPKLEGE 169
L LS N+ SG IP G+
Sbjct: 518 ILKLSNNSFSGNIPAELGD 536
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 76/151 (50%), Gaps = 21/151 (13%)
Query: 60 FSGHILNTFGNLRHLSVLSLLMFGIRLTGNKLYGRIPPCL----VLTVLDVSRNQLSGDI 115
+ GH TF N + MF + ++ N L G IP + L +L++ N +SG I
Sbjct: 620 YGGHTSPTFDNNGSM------MF-LDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSI 672
Query: 116 PSTIGGRVDLETLSLASNQFQGPIPESVGSLISLESLDLSGNNLSGKIPKLEGEIPVKGS 175
P +G L L L+SN+ G IP+++ +L L +DLS NNLSG IP++ G
Sbjct: 673 PDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEM-------GQ 725
Query: 176 FKNFSTESFFGNYALCGPPKLRVPPCKPDNS 206
F+ F F N LCG P +P C P N+
Sbjct: 726 FETFPPAKFLNNPGLCGYP---LPRCDPSNA 753
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 95/209 (45%), Gaps = 37/209 (17%)
Query: 9 NQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITN-ATKLIVLDLGFNSFSGHIL-N 66
N SG LP + ++ L L+ N +G +P S+TN + L+ LDL N+FSG IL N
Sbjct: 328 NNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPN 387
Query: 67 TFGNLRHLSVLSLLMFGIRLTGNKLYGRIPP----CLVLTVLDVSRNQLSGDIPSTIGGR 122
N ++ + + L N G+IPP C L L +S N LSG IPS++G
Sbjct: 388 LCQNPKNT------LQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSL 441
Query: 123 VDLETLSLASNQFQGPIPESVGSLISLESL------------------------DLSGNN 158
L L L N +G IP+ + + +LE+L LS N
Sbjct: 442 SKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNR 501
Query: 159 LSGKIPKLEGEIPVKGSFKNFSTESFFGN 187
L+G+IPK G + K S SF GN
Sbjct: 502 LTGEIPKWIGRLENLAILK-LSNNSFSGN 529
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 94/190 (49%), Gaps = 19/190 (10%)
Query: 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSF 60
++ L + GN++SG + + N+E+L +++NN + IP + + + L LD+ N
Sbjct: 180 LKHLAISGNKISGDVDVS---RCVNLEFLDVSSNNFSTGIP-FLGDCSALQHLDISGNKL 235
Query: 61 SGHILNTFGNLRHLSVLSLLMFGIRLTGNKLYGRIPPCLV--LTVLDVSRNQLSGDIPST 118
SG L +L ++ N+ G IPP + L L ++ N+ +G+IP
Sbjct: 236 SGDFSRAISTCTELKLL-------NISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDF 288
Query: 119 IGGRVD-LETLSLASNQFQGPIPESVGSLISLESLDLSGNNLSGKIP-----KLEGEIPV 172
+ G D L L L+ N F G +P GS LESL LS NN SG++P K+ G +
Sbjct: 289 LSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVL 348
Query: 173 KGSFKNFSTE 182
SF FS E
Sbjct: 349 DLSFNEFSGE 358
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 90/186 (48%), Gaps = 29/186 (15%)
Query: 4 LTLEGNQLSGRLPS-TIGHSLPNIEYLLLTANNLTGTIPNSITNATKL---IVLDLGFNS 59
L L N LSG + + T S +++L +++N L P ++ KL VLDL NS
Sbjct: 105 LDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLD--FPGKVSGGLKLNSLEVLDLSANS 162
Query: 60 FSGH------ILNTFGNLRHLSVLSLLMFG------------IRLTGNKLYGRIP---PC 98
SG + + G L+HL++ + G + ++ N IP C
Sbjct: 163 ISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPFLGDC 222
Query: 99 LVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIPESVGSLISLESLDLSGNN 158
L LD+S N+LSGD I +L+ L+++SNQF GPIP L SL+ L L+ N
Sbjct: 223 SALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENK 280
Query: 159 LSGKIP 164
+G+IP
Sbjct: 281 FTGEIP 286
Score = 29.3 bits (64), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIP 41
+ IL L N+L GR+P + +L + + L+ NNL+G IP
Sbjct: 682 LNILDLSSNKLDGRIPQAM-SALTMLTEIDLSNNNLSGPIP 721
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 111/241 (46%), Gaps = 12/241 (4%)
Query: 273 EFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLE-----RAFRSFDSECEVLRNVR 326
EF + +LG+ +FG+VYKG I +G V I V +L +A + E V+ +V
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 327 HRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLH 386
+ ++ ++L + L+++ MP G L ++ H + LN + + + YL
Sbjct: 78 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 136
Query: 387 NGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEY 446
+ ++H DL N+L+ ++DFG+ KLLG E I +MA E
Sbjct: 137 DRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 192
Query: 447 GLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANL 505
L I + + DV+SYGV + E T +P D + E+S E LP +D +
Sbjct: 193 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYM 252
Query: 506 V 506
+
Sbjct: 253 I 253
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 98/199 (49%), Gaps = 37/199 (18%)
Query: 1 MRILTLEGNQLSGRLPSTI------------------GHSLPNI--------EYLLLTAN 34
+++L L N+ SG LP ++ G LPN+ + L L N
Sbjct: 342 LKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNN 401
Query: 35 NLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLLMFGIRLTGNKLYGR 94
TG IP +++N ++L+ L L FN SG I ++ G+L L L L + N L G
Sbjct: 402 GFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWL-------NMLEGE 454
Query: 95 IPPCLV----LTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIPESVGSLISLE 150
IP L+ L L + N L+G+IPS + +L +SL++N+ G IP+ +G L +L
Sbjct: 455 IPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLA 514
Query: 151 SLDLSGNNLSGKIPKLEGE 169
L LS N+ SG IP G+
Sbjct: 515 ILKLSNNSFSGNIPAELGD 533
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 76/151 (50%), Gaps = 21/151 (13%)
Query: 60 FSGHILNTFGNLRHLSVLSLLMFGIRLTGNKLYGRIPPCL----VLTVLDVSRNQLSGDI 115
+ GH TF N + MF + ++ N L G IP + L +L++ N +SG I
Sbjct: 617 YGGHTSPTFDNNGSM------MF-LDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSI 669
Query: 116 PSTIGGRVDLETLSLASNQFQGPIPESVGSLISLESLDLSGNNLSGKIPKLEGEIPVKGS 175
P +G L L L+SN+ G IP+++ +L L +DLS NNLSG IP++ G
Sbjct: 670 PDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEM-------GQ 722
Query: 176 FKNFSTESFFGNYALCGPPKLRVPPCKPDNS 206
F+ F F N LCG P +P C P N+
Sbjct: 723 FETFPPAKFLNNPGLCGYP---LPRCDPSNA 750
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 95/209 (45%), Gaps = 37/209 (17%)
Query: 9 NQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITN-ATKLIVLDLGFNSFSGHIL-N 66
N SG LP + ++ L L+ N +G +P S+TN + L+ LDL N+FSG IL N
Sbjct: 325 NNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPN 384
Query: 67 TFGNLRHLSVLSLLMFGIRLTGNKLYGRIPP----CLVLTVLDVSRNQLSGDIPSTIGGR 122
N ++ + + L N G+IPP C L L +S N LSG IPS++G
Sbjct: 385 LCQNPKNT------LQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSL 438
Query: 123 VDLETLSLASNQFQGPIPESVGSLISLESL------------------------DLSGNN 158
L L L N +G IP+ + + +LE+L LS N
Sbjct: 439 SKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNR 498
Query: 159 LSGKIPKLEGEIPVKGSFKNFSTESFFGN 187
L+G+IPK G + K S SF GN
Sbjct: 499 LTGEIPKWIGRLENLAILK-LSNNSFSGN 526
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 95/190 (50%), Gaps = 19/190 (10%)
Query: 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSF 60
++ L + GN++SG + + N+E+L +++NN + IP + + + L LD+ N
Sbjct: 177 LKHLAISGNKISGDVDVS---RCVNLEFLDVSSNNFSTGIP-FLGDCSALQHLDISGNKL 232
Query: 61 SGHILNTFGNLRHLSVLSLLMFGIRLTGNKLYGRIPPCLV--LTVLDVSRNQLSGDIPST 118
SG L +L++ + N+ G IPP + L L ++ N+ +G+IP
Sbjct: 233 SGDFSRAISTCTELKLLNI-------SSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDF 285
Query: 119 IGGRVD-LETLSLASNQFQGPIPESVGSLISLESLDLSGNNLSGKIP-----KLEGEIPV 172
+ G D L L L+ N F G +P GS LESL LS NN SG++P K+ G +
Sbjct: 286 LSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVL 345
Query: 173 KGSFKNFSTE 182
SF FS E
Sbjct: 346 DLSFNEFSGE 355
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 90/186 (48%), Gaps = 29/186 (15%)
Query: 4 LTLEGNQLSGRLPS-TIGHSLPNIEYLLLTANNLTGTIPNSITNATKL---IVLDLGFNS 59
L L N LSG + + T S +++L +++N L P ++ KL VLDL NS
Sbjct: 102 LDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLD--FPGKVSGGLKLNSLEVLDLSANS 159
Query: 60 FSGH------ILNTFGNLRHLSVLSLLMFG------------IRLTGNKLYGRIP---PC 98
SG + + G L+HL++ + G + ++ N IP C
Sbjct: 160 ISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPFLGDC 219
Query: 99 LVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIPESVGSLISLESLDLSGNN 158
L LD+S N+LSGD I +L+ L+++SNQF GPIP L SL+ L L+ N
Sbjct: 220 SALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENK 277
Query: 159 LSGKIP 164
+G+IP
Sbjct: 278 FTGEIP 283
Score = 29.3 bits (64), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIP 41
+ IL L N+L GR+P + +L + + L+ NNL+G IP
Sbjct: 679 LNILDLSSNKLDGRIPQAM-SALTMLTEIDLSNNNLSGPIP 718
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 111/241 (46%), Gaps = 12/241 (4%)
Query: 273 EFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLE-----RAFRSFDSECEVLRNVR 326
EF + +LG+ +FG+VYKG I +G V I V +L +A + E V+ +V
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 327 HRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLH 386
+ ++ ++L + L+++ MP G L ++ H + LN + + + YL
Sbjct: 77 NPHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 135
Query: 387 NGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEY 446
+ ++H DL N+L+ ++DFG+ KLLG E I +MA E
Sbjct: 136 DRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 191
Query: 447 GLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANL 505
L I + + DV+SYGV + E T +P D + E+S E LP +D +
Sbjct: 192 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYM 251
Query: 506 V 506
+
Sbjct: 252 I 252
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 111/241 (46%), Gaps = 12/241 (4%)
Query: 273 EFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLE-----RAFRSFDSECEVLRNVR 326
EF + +LG+ +FG+VYKG I +G V I V +L +A + E V+ +V
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 327 HRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLH 386
+ ++ ++L + L+++ MP G L ++ H + LN + + + YL
Sbjct: 76 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 134
Query: 387 NGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEY 446
+ ++H DL N+L+ ++DFG+ KLLG E I +MA E
Sbjct: 135 DRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 190
Query: 447 GLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANL 505
L I + + DV+SYGV + E T +P D + E+S E LP +D +
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYM 250
Query: 506 V 506
+
Sbjct: 251 I 251
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 111/241 (46%), Gaps = 12/241 (4%)
Query: 273 EFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLE-----RAFRSFDSECEVLRNVR 326
EF + +LG+ +FG+VYKG I +G V I V +L +A + E V+ +V
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 327 HRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLH 386
+ ++ ++L + L+++ MP G L ++ H + LN + + + YL
Sbjct: 77 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 135
Query: 387 NGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEY 446
+ ++H DL N+L+ ++DFG+ KLLG E I +MA E
Sbjct: 136 DRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 191
Query: 447 GLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANL 505
L I + + DV+SYGV + E T +P D + E+S E LP +D +
Sbjct: 192 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYM 251
Query: 506 V 506
+
Sbjct: 252 I 252
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 101/195 (51%), Gaps = 8/195 (4%)
Query: 280 LGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSN 339
LG FG V+ G + T VA+K Q + +F +E +++ ++H+ L+++ + +
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 88
Query: 340 PDFKALVLEFMPNGSLEKWLYSHNYF-LDILERLNIMIDVGSALEYLHNGHSSVHIIHCD 398
++ E+M NGSL +L + + L I + L++ + + ++ + IH D
Sbjct: 89 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN----YIHRD 143
Query: 399 LKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDV 458
L+ NIL+ + + ++DFG+ +L+ + E + R+ I + APE G + K DV
Sbjct: 144 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP-IKWTAPEAINYGTFTIKSDV 202
Query: 459 YSYGVLLMETFTRKR 473
+S+G+LL E T R
Sbjct: 203 WSFGILLTEIVTHGR 217
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 101/195 (51%), Gaps = 8/195 (4%)
Query: 280 LGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSN 339
LG FG V+ G + T VA+K Q + +F +E +++ ++H+ L+++ + +
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 87
Query: 340 PDFKALVLEFMPNGSLEKWLYSHNYF-LDILERLNIMIDVGSALEYLHNGHSSVHIIHCD 398
++ E+M NGSL +L + + L I + L++ + + ++ + IH D
Sbjct: 88 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN----YIHRD 142
Query: 399 LKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDV 458
L+ NIL+ + + ++DFG+ +L+ + E + R+ I + APE G + K DV
Sbjct: 143 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP-IKWTAPEAINYGTFTIKSDV 201
Query: 459 YSYGVLLMETFTRKR 473
+S+G+LL E T R
Sbjct: 202 WSFGILLTEIVTHGR 216
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 97/198 (48%), Gaps = 18/198 (9%)
Query: 280 LGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSS-YS 338
+G FG V G G VA+K ++ + ++F +E V+ +RH NL+++L
Sbjct: 201 IGKGEFGDVMLGDYR-GNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 257
Query: 339 NPDFKALVLEFMPNGSLEKWLYSHNYFL---DILERLNIMIDVGSALEYLHNGHSSVHII 395
+V E+M GSL +L S + D L L +DV A+EYL + +
Sbjct: 258 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL--LKFSLDVCEAMEYLEGN----NFV 311
Query: 396 HCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAK 455
H DL N+L+ E+ VA VSDFG+ K E S Q + + APE E S K
Sbjct: 312 HRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREKKFSTK 366
Query: 456 CDVYSYGVLLMETFTRKR 473
DV+S+G+LL E ++ R
Sbjct: 367 SDVWSFGILLWEIYSFGR 384
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 101/195 (51%), Gaps = 8/195 (4%)
Query: 280 LGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSN 339
LG FG V+ G + T VA+K Q + +F +E +++ ++H+ L+++ + +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 85
Query: 340 PDFKALVLEFMPNGSLEKWLYSHNYF-LDILERLNIMIDVGSALEYLHNGHSSVHIIHCD 398
++ E+M NGSL +L + + L I + L++ + + ++ + IH D
Sbjct: 86 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN----YIHRD 140
Query: 399 LKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDV 458
L+ NIL+ + + ++DFG+ +L+ + E + R+ I + APE G + K DV
Sbjct: 141 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP-IKWTAPEAINYGTFTIKSDV 199
Query: 459 YSYGVLLMETFTRKR 473
+S+G+LL E T R
Sbjct: 200 WSFGILLTEIVTHGR 214
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 95/193 (49%), Gaps = 6/193 (3%)
Query: 280 LGTSSFGSVYKGTI-SDGTDVAIKVFNLQLERAFRS-FDSECEVLRNVRHRNLIKILSSY 337
+G +FG V+ G + +D T VA+K L ++ F E +L+ H N+++++
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 338 SNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHC 397
+ +V+E + G +L + L + L ++ D + +EYL S IH
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYL----ESKCCIHR 237
Query: 398 DLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCD 457
DL N L+ E V +SDFG+ + +G + + + + APE G S++ D
Sbjct: 238 DLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESD 297
Query: 458 VYSYGVLLMETFT 470
V+S+G+LL ETF+
Sbjct: 298 VWSFGILLWETFS 310
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 101/195 (51%), Gaps = 8/195 (4%)
Query: 280 LGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSN 339
LG FG V+ G + T VA+K Q + +F +E +++ ++H+ L+++ + +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 340 PDFKALVLEFMPNGSLEKWLYSHNYF-LDILERLNIMIDVGSALEYLHNGHSSVHIIHCD 398
++ E+M NGSL +L + + L I + L++ + + ++ + IH D
Sbjct: 80 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN----YIHRD 134
Query: 399 LKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDV 458
L+ NIL+ + + ++DFG+ +L+ + E + R+ I + APE G + K DV
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP-IKWTAPEAINYGTFTIKSDV 193
Query: 459 YSYGVLLMETFTRKR 473
+S+G+LL E T R
Sbjct: 194 WSFGILLTEIVTHGR 208
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 101/195 (51%), Gaps = 8/195 (4%)
Query: 280 LGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSN 339
LG FG V+ G + T VA+K Q + +F +E +++ ++H+ L+++ + +
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 81
Query: 340 PDFKALVLEFMPNGSLEKWLYSHNYF-LDILERLNIMIDVGSALEYLHNGHSSVHIIHCD 398
++ E+M NGSL +L + + L I + L++ + + ++ + IH D
Sbjct: 82 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN----YIHRD 136
Query: 399 LKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDV 458
L+ NIL+ + + ++DFG+ +L+ + E + R+ I + APE G + K DV
Sbjct: 137 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP-IKWTAPEAINYGTFTIKSDV 195
Query: 459 YSYGVLLMETFTRKR 473
+S+G+LL E T R
Sbjct: 196 WSFGILLTEIVTHGR 210
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 101/195 (51%), Gaps = 8/195 (4%)
Query: 280 LGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSN 339
LG FG V+ G + T VA+K Q + +F +E +++ ++H+ L+++ + +
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 80
Query: 340 PDFKALVLEFMPNGSLEKWLYSHNYF-LDILERLNIMIDVGSALEYLHNGHSSVHIIHCD 398
++ E+M NGSL +L + + L I + L++ + + ++ + IH D
Sbjct: 81 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN----YIHRD 135
Query: 399 LKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDV 458
L+ NIL+ + + ++DFG+ +L+ + E + R+ I + APE G + K DV
Sbjct: 136 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP-IKWTAPEAINYGTFTIKSDV 194
Query: 459 YSYGVLLMETFTRKR 473
+S+G+LL E T R
Sbjct: 195 WSFGILLTEIVTHGR 209
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 101/195 (51%), Gaps = 8/195 (4%)
Query: 280 LGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSN 339
LG FG V+ G + T VA+K Q + +F +E +++ ++H+ L+++ + +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 340 PDFKALVLEFMPNGSLEKWLYSHNYF-LDILERLNIMIDVGSALEYLHNGHSSVHIIHCD 398
++ E+M NGSL +L + + L I + L++ + + ++ + IH D
Sbjct: 80 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN----YIHRD 134
Query: 399 LKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDV 458
L+ NIL+ + + ++DFG+ +L+ + E + R+ I + APE G + K DV
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP-IKWTAPEAINYGTFTIKSDV 193
Query: 459 YSYGVLLMETFTRKR 473
+S+G+LL E T R
Sbjct: 194 WSFGILLTEIVTHGR 208
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 108/210 (51%), Gaps = 20/210 (9%)
Query: 299 VAIKVFNL---QLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSL 355
VAIK + + E + F+ E + H+N++ ++ D LV+E++ +L
Sbjct: 39 VAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTL 98
Query: 356 EKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVS 415
+++ SH L + +N + +++ H+ + I+H D+KP NIL+D N +
Sbjct: 99 SEYIESHGP-LSVDTAINFTNQILDGIKHAHD----MRIVHRDIKPQNILIDSNKTLKIF 153
Query: 416 DFGIYKLLGEGEDSVRQT-MTMATIGYMAPEYGLEGIVSAKC-DVYSYGVLLMETFTRKR 473
DFGI K L E S+ QT + T+ Y +PE +G + +C D+YS G++L E +
Sbjct: 154 DFGIAKALSET--SLTQTNHVLGTVQYFSPEQA-KGEATDECTDIYSIGIVLYEMLVGEP 210
Query: 474 PTDEMFIGEMSLR---RWVKESLPHGLTEV 500
P F GE ++ + +++S+P+ T+V
Sbjct: 211 P----FNGETAVSIAIKHIQDSVPNVTTDV 236
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 125/284 (44%), Gaps = 36/284 (12%)
Query: 278 NLLGTSSFGSVYKG--TISDGTDVAIKVFNLQ---LERAFRSFDSECEVLRNVRHRNLIK 332
++G FG V G + ++ + + L+ E+ R F SE ++ H N+I
Sbjct: 39 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 98
Query: 333 ILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSV 392
+ + ++ EFM NGSL+ +L ++ +++ + ++ + + ++YL + +
Sbjct: 99 LEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYL----ADM 154
Query: 393 HIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMA-----TIGYMAPEYG 447
+ +H DL NIL++ N+V VSDFG+ + L +D+ T T A I + APE
Sbjct: 155 NYVHRDLAARNILVNSNLVCKVSDFGLSRFL--EDDTSDPTYTSALGGKIPIRWTAPEAI 212
Query: 448 LEGIVSAKCDVYSYGVLLMETFTR-KRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLV 506
++ DV+SYG+++ E + +RP +M T N +
Sbjct: 213 QYRKFTSASDVWSYGIVMWEVMSYGERPYWDM-------------------TNQDVINAI 253
Query: 507 REEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKI 550
++ MDC ++ LDC + + R L K+
Sbjct: 254 EQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKM 297
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 110/241 (45%), Gaps = 12/241 (4%)
Query: 273 EFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLE-----RAFRSFDSECEVLRNVR 326
EF + +LG+ +FG+VYKG I +G V I V +L +A + E V+ +V
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 327 HRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLH 386
+ ++ ++L + L+ + MP G L ++ H + LN + + + YL
Sbjct: 79 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 137
Query: 387 NGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEY 446
+ ++H DL N+L+ ++DFG+ KLLG E I +MA E
Sbjct: 138 DRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 193
Query: 447 GLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANL 505
L I + + DV+SYGV + E T +P D + E+S E LP +D +
Sbjct: 194 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYM 253
Query: 506 V 506
+
Sbjct: 254 I 254
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 101/195 (51%), Gaps = 8/195 (4%)
Query: 280 LGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSN 339
LG FG V+ G + T VA+K Q + +F +E +++ ++H+ L+++ + +
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 84
Query: 340 PDFKALVLEFMPNGSLEKWLYSHNYF-LDILERLNIMIDVGSALEYLHNGHSSVHIIHCD 398
++ E+M NGSL +L + + L I + L++ + + ++ + IH D
Sbjct: 85 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN----YIHRD 139
Query: 399 LKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDV 458
L+ NIL+ + + ++DFG+ +L+ + E + R+ I + APE G + K DV
Sbjct: 140 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP-IKWTAPEAINYGTFTIKSDV 198
Query: 459 YSYGVLLMETFTRKR 473
+S+G+LL E T R
Sbjct: 199 WSFGILLTEIVTHGR 213
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 101/195 (51%), Gaps = 8/195 (4%)
Query: 280 LGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSN 339
LG FG V+ G + T VA+K Q + +F +E +++ ++H+ L+++ + +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 85
Query: 340 PDFKALVLEFMPNGSLEKWLYSHNYF-LDILERLNIMIDVGSALEYLHNGHSSVHIIHCD 398
++ E+M NGSL +L + + L I + L++ + + ++ + IH D
Sbjct: 86 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN----YIHRD 140
Query: 399 LKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDV 458
L+ NIL+ + + ++DFG+ +L+ + E + R+ I + APE G + K DV
Sbjct: 141 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP-IKWTAPEAINYGTFTIKSDV 199
Query: 459 YSYGVLLMETFTRKR 473
+S+G+LL E T R
Sbjct: 200 WSFGILLTEIVTHGR 214
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 96/194 (49%), Gaps = 6/194 (3%)
Query: 280 LGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSN 339
LG FG V+ T + T VA+K + +F +E V++ ++H L+K+ + +
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK 81
Query: 340 PDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDL 399
++ EFM GSL +L S L +L ID + + + IH DL
Sbjct: 82 EPI-YIITEFMAKGSLLDFLKSDEGSKQPLPKL---IDFSAQIAEGMAFIEQRNYIHRDL 137
Query: 400 KPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVY 459
+ NIL+ ++V ++DFG+ +++ + E + R+ I + APE G + K DV+
Sbjct: 138 RAANILVSASLVCKIADFGLARVIEDNEYTAREGAKF-PIKWTAPEAINFGSFTIKSDVW 196
Query: 460 SYGVLLMETFTRKR 473
S+G+LLME T R
Sbjct: 197 SFGILLMEIVTYGR 210
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 110/241 (45%), Gaps = 12/241 (4%)
Query: 273 EFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLE-----RAFRSFDSECEVLRNVR 326
EF + +LG+ +FG+VYKG I +G V I V +L +A + E V+ +V
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 327 HRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLH 386
+ ++ ++L + L+ + MP G L ++ H + LN + + + YL
Sbjct: 76 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 134
Query: 387 NGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEY 446
+ ++H DL N+L+ ++DFG+ KLLG E I +MA E
Sbjct: 135 DRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 190
Query: 447 GLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANL 505
L I + + DV+SYGV + E T +P D + E+S E LP +D +
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYM 250
Query: 506 V 506
+
Sbjct: 251 I 251
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 110/241 (45%), Gaps = 12/241 (4%)
Query: 273 EFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLE-----RAFRSFDSECEVLRNVR 326
EF + +LG+ +FG+VYKG I +G V I V +L +A + E V+ +V
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 327 HRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLH 386
+ ++ ++L + L+ + MP G L ++ H + LN + + + YL
Sbjct: 79 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 137
Query: 387 NGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEY 446
+ ++H DL N+L+ ++DFG+ KLLG E I +MA E
Sbjct: 138 DRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 193
Query: 447 GLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANL 505
L I + + DV+SYGV + E T +P D + E+S E LP +D +
Sbjct: 194 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYM 253
Query: 506 V 506
+
Sbjct: 254 I 254
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 110/241 (45%), Gaps = 12/241 (4%)
Query: 273 EFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLE-----RAFRSFDSECEVLRNVR 326
EF + +LG+ +FG+VYKG I +G V I V +L +A + E V+ +V
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 327 HRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLH 386
+ ++ ++L + L+ + MP G L ++ H + LN + + + YL
Sbjct: 78 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 136
Query: 387 NGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEY 446
+ ++H DL N+L+ ++DFG+ KLLG E I +MA E
Sbjct: 137 DRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 192
Query: 447 GLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANL 505
L I + + DV+SYGV + E T +P D + E+S E LP +D +
Sbjct: 193 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYM 252
Query: 506 V 506
+
Sbjct: 253 I 253
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 101/195 (51%), Gaps = 8/195 (4%)
Query: 280 LGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSN 339
LG FG V+ G + T VA+K Q + +F +E +++ ++H+ L+++ + +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 340 PDFKALVLEFMPNGSLEKWLYSHNYF-LDILERLNIMIDVGSALEYLHNGHSSVHIIHCD 398
++ E+M NGSL +L + + L I + L++ + + ++ + IH D
Sbjct: 80 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN----YIHRD 134
Query: 399 LKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDV 458
L+ NIL+ + + ++DFG+ +L+ + E + R+ I + APE G + K DV
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP-IKWTAPEAINYGTFTIKSDV 193
Query: 459 YSYGVLLMETFTRKR 473
+S+G+LL E T R
Sbjct: 194 WSFGILLTEIVTHGR 208
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 101/195 (51%), Gaps = 8/195 (4%)
Query: 280 LGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSN 339
LG FG V+ G + T VA+K Q + +F +E +++ ++H+ L+++ + +
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 74
Query: 340 PDFKALVLEFMPNGSLEKWLYSHNYF-LDILERLNIMIDVGSALEYLHNGHSSVHIIHCD 398
++ E+M NGSL +L + + L I + L++ + + ++ + IH D
Sbjct: 75 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN----YIHRD 129
Query: 399 LKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDV 458
L+ NIL+ + + ++DFG+ +L+ + E + R+ I + APE G + K DV
Sbjct: 130 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP-IKWTAPEAINYGTFTIKSDV 188
Query: 459 YSYGVLLMETFTRKR 473
+S+G+LL E T R
Sbjct: 189 WSFGILLTEIVTHGR 203
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 110/241 (45%), Gaps = 12/241 (4%)
Query: 273 EFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLE-----RAFRSFDSECEVLRNVR 326
EF + +LG+ +FG+VYKG I +G V I V +L +A + E V+ +V
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 327 HRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLH 386
+ ++ ++L + L+ + MP G L ++ H + LN + + + YL
Sbjct: 79 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 137
Query: 387 NGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEY 446
+ ++H DL N+L+ ++DFG+ KLLG E I +MA E
Sbjct: 138 DRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 193
Query: 447 GLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANL 505
L I + + DV+SYGV + E T +P D + E+S E LP +D +
Sbjct: 194 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYM 253
Query: 506 V 506
+
Sbjct: 254 I 254
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 101/195 (51%), Gaps = 8/195 (4%)
Query: 280 LGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSN 339
LG FG V+ G + T VA+K Q + +F +E +++ ++H+ L+++ + +
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 89
Query: 340 PDFKALVLEFMPNGSLEKWLYSHNYF-LDILERLNIMIDVGSALEYLHNGHSSVHIIHCD 398
++ E+M NGSL +L + + L I + L++ + + ++ + IH D
Sbjct: 90 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN----YIHRD 144
Query: 399 LKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDV 458
L+ NIL+ + + ++DFG+ +L+ + E + R+ I + APE G + K DV
Sbjct: 145 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP-IKWTAPEAINYGTFTIKSDV 203
Query: 459 YSYGVLLMETFTRKR 473
+S+G+LL E T R
Sbjct: 204 WSFGILLTEIVTHGR 218
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 110/241 (45%), Gaps = 12/241 (4%)
Query: 273 EFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLE-----RAFRSFDSECEVLRNVR 326
EF + +LG+ +FG+VYKG I +G V I V +L +A + E V+ +V
Sbjct: 22 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 81
Query: 327 HRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLH 386
+ ++ ++L + L+ + MP G L ++ H + LN + + + YL
Sbjct: 82 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 140
Query: 387 NGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEY 446
+ ++H DL N+L+ ++DFG+ KLLG E I +MA E
Sbjct: 141 DRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 196
Query: 447 GLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANL 505
L I + + DV+SYGV + E T +P D + E+S E LP +D +
Sbjct: 197 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYM 256
Query: 506 V 506
+
Sbjct: 257 I 257
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 110/241 (45%), Gaps = 12/241 (4%)
Query: 273 EFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLE-----RAFRSFDSECEVLRNVR 326
EF + +LG+ +FG+VYKG I +G V I V +L +A + E V+ +V
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 327 HRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLH 386
+ ++ ++L + L+ + MP G L ++ H + LN + + + YL
Sbjct: 83 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 141
Query: 387 NGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEY 446
+ ++H DL N+L+ ++DFG+ KLLG E I +MA E
Sbjct: 142 DRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 197
Query: 447 GLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANL 505
L I + + DV+SYGV + E T +P D + E+S E LP +D +
Sbjct: 198 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYM 257
Query: 506 V 506
+
Sbjct: 258 I 258
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 110/241 (45%), Gaps = 12/241 (4%)
Query: 273 EFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLE-----RAFRSFDSECEVLRNVR 326
EF + +LG+ +FG+VYKG I +G V I V +L +A + E V+ +V
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 85
Query: 327 HRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLH 386
+ ++ ++L + L+ + MP G L ++ H + LN + + + YL
Sbjct: 86 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 144
Query: 387 NGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEY 446
+ ++H DL N+L+ ++DFG+ KLLG E I +MA E
Sbjct: 145 DRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 200
Query: 447 GLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANL 505
L I + + DV+SYGV + E T +P D + E+S E LP +D +
Sbjct: 201 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYM 260
Query: 506 V 506
+
Sbjct: 261 I 261
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 110/241 (45%), Gaps = 12/241 (4%)
Query: 273 EFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLE-----RAFRSFDSECEVLRNVR 326
EF + +LG+ +FG+VYKG I +G V I V +L +A + E V+ +V
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 327 HRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLH 386
+ ++ ++L + L+ + MP G L ++ H + LN + + + YL
Sbjct: 76 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 134
Query: 387 NGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEY 446
+ ++H DL N+L+ ++DFG+ KLLG E I +MA E
Sbjct: 135 DRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 190
Query: 447 GLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANL 505
L I + + DV+SYGV + E T +P D + E+S E LP +D +
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYM 250
Query: 506 V 506
+
Sbjct: 251 I 251
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 110/241 (45%), Gaps = 12/241 (4%)
Query: 273 EFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLE-----RAFRSFDSECEVLRNVR 326
EF + +LG+ +FG+VYKG I +G V I V +L +A + E V+ +V
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 327 HRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLH 386
+ ++ ++L + L+ + MP G L ++ H + LN + + + YL
Sbjct: 76 NPHVCRLLGICLTSTVQ-LITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 134
Query: 387 NGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEY 446
+ ++H DL N+L+ ++DFG+ KLLG E I +MA E
Sbjct: 135 DRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 190
Query: 447 GLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANL 505
L I + + DV+SYGV + E T +P D + E+S E LP +D +
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYM 250
Query: 506 V 506
+
Sbjct: 251 I 251
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 110/241 (45%), Gaps = 12/241 (4%)
Query: 273 EFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLE-----RAFRSFDSECEVLRNVR 326
EF + +LG+ +FG+VYKG I +G V I V +L +A + E V+ +V
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 72
Query: 327 HRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLH 386
+ ++ ++L + L+ + MP G L ++ H + LN + + + YL
Sbjct: 73 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNYLE 131
Query: 387 NGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEY 446
+ ++H DL N+L+ ++DFG+ KLLG E I +MA E
Sbjct: 132 DRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 187
Query: 447 GLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANL 505
L I + + DV+SYGV + E T +P D + E+S E LP +D +
Sbjct: 188 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYM 247
Query: 506 V 506
+
Sbjct: 248 I 248
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 110/241 (45%), Gaps = 12/241 (4%)
Query: 273 EFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLE-----RAFRSFDSECEVLRNVR 326
EF + +LG+ +FG+VYKG I +G V I V +L +A + E V+ +V
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 327 HRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLH 386
+ ++ ++L + L+++ MP G L ++ H + LN + + + YL
Sbjct: 78 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 136
Query: 387 NGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEY 446
+ ++H DL N+L+ ++DFG KLLG E I +MA E
Sbjct: 137 DRR----LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALES 192
Query: 447 GLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANL 505
L I + + DV+SYGV + E T +P D + E+S E LP +D +
Sbjct: 193 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYM 252
Query: 506 V 506
+
Sbjct: 253 I 253
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 110/241 (45%), Gaps = 12/241 (4%)
Query: 273 EFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLE-----RAFRSFDSECEVLRNVR 326
EF + +LG+ +FG+VYKG I +G V I V +L +A + E V+ +V
Sbjct: 41 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 100
Query: 327 HRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLH 386
+ ++ ++L + L+ + MP G L ++ H + LN + + + YL
Sbjct: 101 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 159
Query: 387 NGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEY 446
+ ++H DL N+L+ ++DFG+ KLLG E I +MA E
Sbjct: 160 DRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 215
Query: 447 GLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANL 505
L I + + DV+SYGV + E T +P D + E+S E LP +D +
Sbjct: 216 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYM 275
Query: 506 V 506
+
Sbjct: 276 I 276
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 110/241 (45%), Gaps = 12/241 (4%)
Query: 273 EFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLE-----RAFRSFDSECEVLRNVR 326
EF + +LG+ +FG+VYKG I +G V I V +L +A + E V+ +V
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 69
Query: 327 HRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLH 386
+ ++ ++L + L+ + MP G L ++ H + LN + + + YL
Sbjct: 70 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 128
Query: 387 NGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEY 446
+ ++H DL N+L+ ++DFG+ KLLG E I +MA E
Sbjct: 129 DRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 184
Query: 447 GLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANL 505
L I + + DV+SYGV + E T +P D + E+S E LP +D +
Sbjct: 185 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYM 244
Query: 506 V 506
+
Sbjct: 245 I 245
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 110/241 (45%), Gaps = 12/241 (4%)
Query: 273 EFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLE-----RAFRSFDSECEVLRNVR 326
EF + +LG+ +FG+VYKG I +G V I V +L +A + E V+ +V
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 327 HRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLH 386
+ ++ ++L + L+++ MP G L ++ H + LN + + + YL
Sbjct: 78 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 136
Query: 387 NGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEY 446
+ ++H DL N+L+ ++DFG KLLG E I +MA E
Sbjct: 137 DRR----LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALES 192
Query: 447 GLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANL 505
L I + + DV+SYGV + E T +P D + E+S E LP +D +
Sbjct: 193 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYM 252
Query: 506 V 506
+
Sbjct: 253 I 253
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 99/192 (51%), Gaps = 7/192 (3%)
Query: 280 LGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSN 339
LG FG V+ G ++ T VA+K + ++F E +++ ++H L+++ + +
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTR 79
Query: 340 PDFKALVLEFMPNGSLEKWLYSHNYFLDILERL-NIMIDVGSALEYLHNGHSSVHIIHCD 398
+ ++ E+M GSL +L S +L +L + + + Y+ + IH D
Sbjct: 80 EEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN----YIHRD 135
Query: 399 LKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDV 458
L+ N+L+ E+++ ++DFG+ +++ + E + R+ I + APE G + K DV
Sbjct: 136 LRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFP-IKWTAPEAINFGCFTIKSDV 194
Query: 459 YSYGVLLMETFT 470
+S+G+LL E T
Sbjct: 195 WSFGILLYEIVT 206
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 108/220 (49%), Gaps = 11/220 (5%)
Query: 255 PLAIWRRTSYLDIQRATDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRS 314
P W + ++ +I R + + + LG FG V+ T + T VA+K + +
Sbjct: 174 PQKPWEKDAW-EIPRESLKLEKK--LGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEA 229
Query: 315 FDSECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERL-N 373
F +E V++ ++H L+K+ + + ++ EFM GSL +L S L +L +
Sbjct: 230 FLAEANVMKTLQHDKLVKLHAVVTKEPI-YIITEFMAKGSLLDFLKSDEGSKQPLPKLID 288
Query: 374 IMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQT 433
+ + ++ + IH DL+ NIL+ ++V ++DFG+ +++ + E + R+
Sbjct: 289 FSAQIAEGMAFIEQRN----YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREG 344
Query: 434 MTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKR 473
I + APE G + K DV+S+G+LLME T R
Sbjct: 345 AKFP-IKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGR 383
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 110/241 (45%), Gaps = 12/241 (4%)
Query: 273 EFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLE-----RAFRSFDSECEVLRNVR 326
EF + +LG+ +FG+VYKG I +G V I V +L +A + E V+ +V
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 327 HRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLH 386
+ ++ ++L + L+++ MP G L ++ H + LN + + + YL
Sbjct: 80 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 138
Query: 387 NGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEY 446
+ ++H DL N+L+ ++DFG KLLG E I +MA E
Sbjct: 139 DRR----LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALES 194
Query: 447 GLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANL 505
L I + + DV+SYGV + E T +P D + E+S E LP +D +
Sbjct: 195 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYM 254
Query: 506 V 506
+
Sbjct: 255 I 255
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 121/292 (41%), Gaps = 44/292 (15%)
Query: 280 LGTSSFGSVYKGTI------SDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKI 333
LG +FG V+ D VA+K E A + F E E+L ++H+++++
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 334 LSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDIL--------------ERLNIMIDVG 379
+ +V E+M +G L ++L SH +L + L + V
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 380 SALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATI 439
+ + YL + +H +H DL N L+ + +V + DFG+ + + + TM I
Sbjct: 169 AGMVYL----AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 224
Query: 440 GYMAPEYGLEGIVSAKCDVYSYGVLLMETFTR-KRPTDEMFIGEMSLRRWVKESLPHGLT 498
+M PE L + + DV+S+GV+L E FT K+P W + S T
Sbjct: 225 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP-------------WYQLS----NT 267
Query: 499 EVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKI 550
E +D + + + C + C P R ++ D A+L+ +
Sbjct: 268 EAIDC--ITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQAL 317
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 121/292 (41%), Gaps = 44/292 (15%)
Query: 280 LGTSSFGSVYKGTI------SDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKI 333
LG +FG V+ D VA+K E A + F E E+L ++H+++++
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 334 LSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDIL--------------ERLNIMIDVG 379
+ +V E+M +G L ++L SH +L + L + V
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 380 SALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATI 439
+ + YL + +H +H DL N L+ + +V + DFG+ + + + TM I
Sbjct: 140 AGMVYL----AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 195
Query: 440 GYMAPEYGLEGIVSAKCDVYSYGVLLMETFTR-KRPTDEMFIGEMSLRRWVKESLPHGLT 498
+M PE L + + DV+S+GV+L E FT K+P W + S T
Sbjct: 196 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP-------------WYQLS----NT 238
Query: 499 EVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKI 550
E +D + + + C + C P R ++ D A+L+ +
Sbjct: 239 EAIDC--ITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQAL 288
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 99/192 (51%), Gaps = 7/192 (3%)
Query: 280 LGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSN 339
LG FG V+ G ++ T VA+K + ++F E +++ ++H L+++ + +
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTK 78
Query: 340 PDFKALVLEFMPNGSLEKWLYSHNYFLDILERL-NIMIDVGSALEYLHNGHSSVHIIHCD 398
+ ++ EFM GSL +L S +L +L + + + Y+ + IH D
Sbjct: 79 EEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN----YIHRD 134
Query: 399 LKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDV 458
L+ N+L+ E+++ ++DFG+ +++ + E + R+ I + APE G + K +V
Sbjct: 135 LRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFP-IKWTAPEAINFGCFTIKSNV 193
Query: 459 YSYGVLLMETFT 470
+S+G+LL E T
Sbjct: 194 WSFGILLYEIVT 205
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 121/292 (41%), Gaps = 44/292 (15%)
Query: 280 LGTSSFGSVYKGTI------SDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKI 333
LG +FG V+ D VA+K E A + F E E+L ++H+++++
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 334 LSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDIL--------------ERLNIMIDVG 379
+ +V E+M +G L ++L SH +L + L + V
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 380 SALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATI 439
+ + YL + +H +H DL N L+ + +V + DFG+ + + + TM I
Sbjct: 146 AGMVYL----AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 201
Query: 440 GYMAPEYGLEGIVSAKCDVYSYGVLLMETFTR-KRPTDEMFIGEMSLRRWVKESLPHGLT 498
+M PE L + + DV+S+GV+L E FT K+P W + S T
Sbjct: 202 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP-------------WYQLS----NT 244
Query: 499 EVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKI 550
E +D + + + C + C P R ++ D A+L+ +
Sbjct: 245 EAIDC--ITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQAL 294
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 110/241 (45%), Gaps = 12/241 (4%)
Query: 273 EFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLE-----RAFRSFDSECEVLRNVR 326
EF + +L + +FG+VYKG I +G V I V +L +A + E V+ +V
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 327 HRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLH 386
+ ++ ++L + L+++ MP G L ++ H + LN + + + YL
Sbjct: 83 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 141
Query: 387 NGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEY 446
+ ++H DL N+L+ ++DFG+ KLLG E I +MA E
Sbjct: 142 DRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 197
Query: 447 GLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANL 505
L I + + DV+SYGV + E T +P D + E+S E LP +D +
Sbjct: 198 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYM 257
Query: 506 V 506
+
Sbjct: 258 I 258
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 104/211 (49%), Gaps = 22/211 (10%)
Query: 278 NLLGTSSFGSVYKGTI--SDGTDVAIKVFNLQL----ERAFRSFDSECEVLRNVRHRNLI 331
+LG FGSV +G + DGT + + V ++L +R F SE +++ H N+I
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 332 KIL------SSYSNPDFKALVLEFMPNGSLEKWL-YSH----NYFLDILERLNIMIDVGS 380
++L SS P ++L FM G L +L YS + + L M+D+
Sbjct: 100 RLLGVCIEMSSQGIPK-PMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIAL 158
Query: 381 ALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIG 440
+EYL N + +H DL N +L ++M V+DFG+ K + G+ + + +
Sbjct: 159 GMEYLSNRN----FLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVK 214
Query: 441 YMAPEYGLEGIVSAKCDVYSYGVLLMETFTR 471
++A E + + ++K DV+++GV + E TR
Sbjct: 215 WIAIESLADRVYTSKSDVWAFGVTMWEIATR 245
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 109/241 (45%), Gaps = 12/241 (4%)
Query: 273 EFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLE-----RAFRSFDSECEVLRNVR 326
EF + +LG+ +FG+VYKG I +G V I V +L +A + E V+ +V
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 327 HRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLH 386
+ ++ ++L + L+ + MP G L ++ H + LN + + + YL
Sbjct: 78 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 136
Query: 387 NGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEY 446
+ ++H DL N+L+ ++DFG KLLG E I +MA E
Sbjct: 137 DRR----LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALES 192
Query: 447 GLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANL 505
L I + + DV+SYGV + E T +P D + E+S E LP +D +
Sbjct: 193 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYM 252
Query: 506 V 506
+
Sbjct: 253 I 253
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 109/241 (45%), Gaps = 12/241 (4%)
Query: 273 EFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLE-----RAFRSFDSECEVLRNVR 326
EF + +LG+ +FG+VYKG I +G V I V +L +A + E V+ +V
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 327 HRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLH 386
+ ++ ++L + L+ + MP G L ++ H + LN + + + YL
Sbjct: 83 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 141
Query: 387 NGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEY 446
+ ++H DL N+L+ ++DFG KLLG E I +MA E
Sbjct: 142 DRR----LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALES 197
Query: 447 GLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANL 505
L I + + DV+SYGV + E T +P D + E+S E LP +D +
Sbjct: 198 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYM 257
Query: 506 V 506
+
Sbjct: 258 I 258
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 101/195 (51%), Gaps = 8/195 (4%)
Query: 280 LGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSN 339
LG FG V+ G + T VA+K Q + +F +E +++ ++H+ L+++ + +
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 75
Query: 340 PDFKALVLEFMPNGSLEKWLYSHNYF-LDILERLNIMIDVGSALEYLHNGHSSVHIIHCD 398
++ E+M NGSL +L + + L I + L++ + + ++ + IH +
Sbjct: 76 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN----YIHRN 130
Query: 399 LKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDV 458
L+ NIL+ + + ++DFG+ +L+ + E + R+ I + APE G + K DV
Sbjct: 131 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP-IKWTAPEAINYGTFTIKSDV 189
Query: 459 YSYGVLLMETFTRKR 473
+S+G+LL E T R
Sbjct: 190 WSFGILLTEIVTHGR 204
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 100/195 (51%), Gaps = 8/195 (4%)
Query: 280 LGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSN 339
LG G V+ G + T VA+K Q + +F +E +++ ++H+ L+++ + +
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 340 PDFKALVLEFMPNGSLEKWLYSHNYF-LDILERLNIMIDVGSALEYLHNGHSSVHIIHCD 398
++ E+M NGSL +L + + L I + L++ + + ++ + IH D
Sbjct: 80 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN----YIHRD 134
Query: 399 LKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDV 458
L+ NIL+ + + ++DFG+ +L+ + E + R+ I + APE G + K DV
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFP-IKWTAPEAINYGTFTIKSDV 193
Query: 459 YSYGVLLMETFTRKR 473
+S+G+LL E T R
Sbjct: 194 WSFGILLTEIVTHGR 208
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 109/241 (45%), Gaps = 12/241 (4%)
Query: 273 EFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLE-----RAFRSFDSECEVLRNVR 326
EF + +LG+ +FG+VYKG I +G V I V +L +A + E V+ +V
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 327 HRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLH 386
+ ++ ++L + L+ + MP G L ++ H + LN + + + YL
Sbjct: 76 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 134
Query: 387 NGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEY 446
+ ++H DL N+L+ ++DFG KLLG E I +MA E
Sbjct: 135 DRR----LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALES 190
Query: 447 GLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANL 505
L I + + DV+SYGV + E T +P D + E+S E LP +D +
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYM 250
Query: 506 V 506
+
Sbjct: 251 I 251
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 100/212 (47%), Gaps = 15/212 (7%)
Query: 268 QRATDEFNECNLLGTSSFGSVYKGTISDGTDV-AIKV-FNLQLERA--FRSFDSECEVLR 323
Q A ++F LG FG+VY + A+KV F QLE+A E E+
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 324 NVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALE 383
++RH N++++ + + L+LE+ P G + K L + F D + ++ +AL
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKF-DEQRTATYITELANALS 127
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
Y H S +IH D+KP N+LL ++DFG S R+T T+ Y+
Sbjct: 128 YCH----SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLP 179
Query: 444 PEYGLEG-IVSAKCDVYSYGVLLMETFTRKRP 474
PE +EG + K D++S GVL E K P
Sbjct: 180 PEM-IEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 104/237 (43%), Gaps = 55/237 (23%)
Query: 9 NQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTF 68
N L G +P I L + YL +T N++G IP+ ++ L+ LD +N+ SG + +
Sbjct: 87 NNLVGPIPPAIAK-LTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSI 145
Query: 69 GNLRHL------------------SVLSLLMFGIRLTGNKLYGRIPPC---LVLTVLDVS 107
+L +L S L + ++ N+L G+IPP L L +D+S
Sbjct: 146 SSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLS 205
Query: 108 RNQLSGDIPSTIG-------------------GRV----DLETLSLASNQFQGPIPESVG 144
RN L GD G G+V +L L L +N+ G +P+ +
Sbjct: 206 RNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLT 265
Query: 145 SLISLESLDLSGNNLSGKIPKLEGEIPVKGSFKNFSTESFFGNYALCGPPKLRVPPC 201
L L SL++S NNL GEIP G+ + F ++ N LCG P +P C
Sbjct: 266 QLKFLHSLNVSFNNLC-------GEIPQGGNLQRFDVSAYANNKCLCGSP---LPAC 312
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 24/209 (11%)
Query: 280 LGTSSFGSVYKGTIS----DGTDVAIKVFNLQ---LERAFRSFDSECEVLRNVRHRNLIK 332
LG +FG VY+G +S D + + + V L E+ F E ++ + H+N+++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 333 IL--SSYSNPDFKALVLEFMPNGSLEKWLY------SHNYFLDILERLNIMIDVGSALEY 384
+ S S P F ++LE M G L+ +L S L +L+ L++ D+ +Y
Sbjct: 99 CIGVSLQSLPRF--ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 385 LHNGHSSVHIIHCDLKPTNILL---DENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGY 441
L H IH D+ N LL VA + DFG+ + + + M + +
Sbjct: 157 LEENH----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 212
Query: 442 MAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
M PE +EGI ++K D +S+GVLL E F+
Sbjct: 213 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 102/206 (49%), Gaps = 15/206 (7%)
Query: 278 NLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLERAFR---SFDSECEVLRNVRHRNLIKI 333
+ LG +FG V G G VA+K+ N Q R+ E + L+ RH ++IK+
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 334 LSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVH 393
S P +V+E++ G L ++ H ++ +E + + SA++Y H
Sbjct: 77 YQVISTPTDFFMVMEYVSGGELFDYICKHGR-VEEMEARRLFQQILSAVDYCHRHM---- 131
Query: 394 IIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVS 453
++H DLKP N+LLD +M A ++DFG+ ++ +GE + + Y APE + G +
Sbjct: 132 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE---FLRTSCGSPNYAAPEV-ISGRLY 187
Query: 454 A--KCDVYSYGVLLMETFTRKRPTDE 477
A + D++S GV+L P D+
Sbjct: 188 AGPEVDIWSCGVILYALLCGTLPFDD 213
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 109/241 (45%), Gaps = 12/241 (4%)
Query: 273 EFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLE-----RAFRSFDSECEVLRNVR 326
EF + +L + +FG+VYKG I +G V I V +L +A + E V+ +V
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 327 HRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLH 386
+ ++ ++L + L+ + MP G L ++ H + LN + + + YL
Sbjct: 83 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 141
Query: 387 NGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEY 446
+ ++H DL N+L+ ++DFG+ KLLG E I +MA E
Sbjct: 142 DRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 197
Query: 447 GLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANL 505
L I + + DV+SYGV + E T +P D + E+S E LP +D +
Sbjct: 198 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYM 257
Query: 506 V 506
+
Sbjct: 258 I 258
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 104/206 (50%), Gaps = 15/206 (7%)
Query: 278 NLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLERAFR---SFDSECEVLRNVRHRNLIKI 333
+ LG +FG V G G VA+K+ N Q R+ E + L+ RH ++IK+
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 334 LSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVH 393
S P +V+E++ G L ++ H ++ +E + + SA++Y H
Sbjct: 77 YQVISTPTDFFMVMEYVSGGELFDYICKHGR-VEEMEARRLFQQILSAVDYCHRHM---- 131
Query: 394 IIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVS 453
++H DLKP N+LLD +M A ++DFG+ ++ +GE +R + + Y APE + G +
Sbjct: 132 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE-FLRD--SCGSPNYAAPEV-ISGRLY 187
Query: 454 A--KCDVYSYGVLLMETFTRKRPTDE 477
A + D++S GV+L P D+
Sbjct: 188 AGPEVDIWSCGVILYALLCGTLPFDD 213
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 99/202 (49%), Gaps = 10/202 (4%)
Query: 280 LGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKI--LSSY 337
LGT FG V G DVAIK+ + + F E +V+ N+ H L+++ + +
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 338 SNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHC 397
P F ++ E+M NG L +L + + L + DV A+EYL S +H
Sbjct: 91 QRPIF--IITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE----SKQFLHR 144
Query: 398 DLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCD 457
DL N L+++ V VSDFG+ + + + E++ + + + PE + S+K D
Sbjct: 145 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEET-SSVGSKFPVRWSPPEVLMYSKFSSKSD 203
Query: 458 VYSYGVLLMETFTRKRPTDEMF 479
++++GVL+ E ++ + E F
Sbjct: 204 IWAFGVLMWEIYSLGKMPYERF 225
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 24/209 (11%)
Query: 280 LGTSSFGSVYKGTIS----DGTDVAIKVFNLQ---LERAFRSFDSECEVLRNVRHRNLIK 332
LG +FG VY+G +S D + + + V L E+ F E ++ + H+N+++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 333 IL--SSYSNPDFKALVLEFMPNGSLEKWLY------SHNYFLDILERLNIMIDVGSALEY 384
+ S S P F ++LE M G L+ +L S L +L+ L++ D+ +Y
Sbjct: 113 CIGVSLQSLPRF--ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 385 LHNGHSSVHIIHCDLKPTNILL---DENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGY 441
L H IH D+ N LL VA + DFG+ + + + M + +
Sbjct: 171 LEENH----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 226
Query: 442 MAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
M PE +EGI ++K D +S+GVLL E F+
Sbjct: 227 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 109/241 (45%), Gaps = 12/241 (4%)
Query: 273 EFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLE-----RAFRSFDSECEVLRNVR 326
EF + +L + +FG+VYKG I +G V I V +L +A + E V+ +V
Sbjct: 16 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 327 HRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLH 386
+ ++ ++L + L+ + MP G L ++ H + LN + + + YL
Sbjct: 76 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 134
Query: 387 NGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEY 446
+ ++H DL N+L+ ++DFG+ KLLG E I +MA E
Sbjct: 135 DRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 190
Query: 447 GLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANL 505
L I + + DV+SYGV + E T +P D + E+S E LP +D +
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYM 250
Query: 506 V 506
+
Sbjct: 251 I 251
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 96/200 (48%), Gaps = 14/200 (7%)
Query: 280 LGTSSFGSV---YKGTISDGTDVAIKVFNLQLE--RAFRSFDSECEVLRNVRHRNLIKIL 334
LG +FGSV + D T + V LQ R F E ++L+ + ++K
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 335 S-SYS--NPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSS 391
SY P+ + LV+E++P+G L +L H LD L + +EYL S
Sbjct: 75 GVSYGPGRPELR-LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL----GS 129
Query: 392 VHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDS-VRQTMTMATIGYMAPEYGLEG 450
+H DL NIL++ ++DFG+ KLL +D V + + I + APE +
Sbjct: 130 RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDN 189
Query: 451 IVSAKCDVYSYGVLLMETFT 470
I S + DV+S+GV+L E FT
Sbjct: 190 IFSRQSDVWSFGVVLYELFT 209
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 99/209 (47%), Gaps = 24/209 (11%)
Query: 280 LGTSSFGSVYKGTIS----DGTDVAIKVFNLQ---LERAFRSFDSECEVLRNVRHRNLIK 332
LG +FG VY+G +S D + + + V L E+ F E ++ H+N+++
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 333 IL--SSYSNPDFKALVLEFMPNGSLEKWLY------SHNYFLDILERLNIMIDVGSALEY 384
+ S S P F ++LE M G L+ +L S L +L+ L++ D+ +Y
Sbjct: 90 CIGVSLQSLPRF--ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 147
Query: 385 LHNGHSSVHIIHCDLKPTNILL---DENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGY 441
L H IH D+ N LL VA + DFG+ + + + M + +
Sbjct: 148 LEENH----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 203
Query: 442 MAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
M PE +EGI ++K D +S+GVLL E F+
Sbjct: 204 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 99/209 (47%), Gaps = 24/209 (11%)
Query: 280 LGTSSFGSVYKGTIS----DGTDVAIKVFNLQ---LERAFRSFDSECEVLRNVRHRNLIK 332
LG +FG VY+G +S D + + + V L E+ F E ++ H+N+++
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 333 IL--SSYSNPDFKALVLEFMPNGSLEKWLY------SHNYFLDILERLNIMIDVGSALEY 384
+ S S P F ++LE M G L+ +L S L +L+ L++ D+ +Y
Sbjct: 98 CIGVSLQSLPRF--ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 155
Query: 385 LHNGHSSVHIIHCDLKPTNILL---DENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGY 441
L H IH D+ N LL VA + DFG+ + + + M + +
Sbjct: 156 LEENH----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 211
Query: 442 MAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
M PE +EGI ++K D +S+GVLL E F+
Sbjct: 212 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 124/284 (43%), Gaps = 36/284 (12%)
Query: 278 NLLGTSSFGSVYKG--TISDGTDVAIKVFNLQ---LERAFRSFDSECEVLRNVRHRNLIK 332
++G FG V G + ++ + + L+ E+ R F SE ++ H N+I
Sbjct: 13 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 72
Query: 333 ILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSV 392
+ + ++ EFM NGSL+ +L ++ +++ + ++ + + ++YL + +
Sbjct: 73 LEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYL----ADM 128
Query: 393 HIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMA-----TIGYMAPEYG 447
+ +H L NIL++ N+V VSDFG+ + L +D+ T T A I + APE
Sbjct: 129 NYVHRALAARNILVNSNLVCKVSDFGLSRFL--EDDTSDPTYTSALGGKIPIRWTAPEAI 186
Query: 448 LEGIVSAKCDVYSYGVLLMETFTR-KRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLV 506
++ DV+SYG+++ E + +RP +M T N +
Sbjct: 187 QYRKFTSASDVWSYGIVMWEVMSYGERPYWDM-------------------TNQDVINAI 227
Query: 507 REEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKI 550
++ MDC ++ LDC + + R L K+
Sbjct: 228 EQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKM 271
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 99/209 (47%), Gaps = 24/209 (11%)
Query: 280 LGTSSFGSVYKGTIS----DGTDVAIKVFNLQ---LERAFRSFDSECEVLRNVRHRNLIK 332
LG +FG VY+G +S D + + + V L E+ F E ++ H+N+++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 333 IL--SSYSNPDFKALVLEFMPNGSLEKWLY------SHNYFLDILERLNIMIDVGSALEY 384
+ S S P F ++LE M G L+ +L S L +L+ L++ D+ +Y
Sbjct: 99 CIGVSLQSLPRF--ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 385 LHNGHSSVHIIHCDLKPTNILL---DENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGY 441
L H IH D+ N LL VA + DFG+ + + + M + +
Sbjct: 157 LEENH----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 212
Query: 442 MAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
M PE +EGI ++K D +S+GVLL E F+
Sbjct: 213 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 99/209 (47%), Gaps = 24/209 (11%)
Query: 280 LGTSSFGSVYKGTISDGTD------VAIKVF-NLQLERAFRSFDSECEVLRNVRHRNLIK 332
LG +FG VY+G +S + VA+K + E+ F E ++ H+N+++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 333 IL--SSYSNPDFKALVLEFMPNGSLEKWLY------SHNYFLDILERLNIMIDVGSALEY 384
+ S S P F ++LE M G L+ +L S L +L+ L++ D+ +Y
Sbjct: 113 CIGVSLQSLPRF--ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 385 LHNGHSSVHIIHCDLKPTNILL---DENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGY 441
L H IH D+ N LL VA + DFG+ + + + M + +
Sbjct: 171 LEENH----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 226
Query: 442 MAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
M PE +EGI ++K D +S+GVLL E F+
Sbjct: 227 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 280 LGTSSFGSV---YKGTISDGTDVAIKVFNLQLE--RAFRSFDSECEVLRNVRHRNLIKIL 334
LG +FGSV + D T + V LQ R F E ++L+ + ++K
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 77
Query: 335 SSYSNPDFKAL--VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSV 392
P ++L V+E++P+G L +L H LD L + +EYL S
Sbjct: 78 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL----GSR 133
Query: 393 HIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDS-VRQTMTMATIGYMAPEYGLEGI 451
+H DL NIL++ ++DFG+ KLL +D V + + I + APE + I
Sbjct: 134 RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNI 193
Query: 452 VSAKCDVYSYGVLLMETFT 470
S + DV+S+GV+L E FT
Sbjct: 194 FSRQSDVWSFGVVLYELFT 212
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 128/331 (38%), Gaps = 61/331 (18%)
Query: 242 NRNTKKSDHEDFLPLAIWRRTSYLDIQRATDEFNECNLLGTSSFGSVYKGTIS-DG--TD 298
NR K + P+ W + D+ +G +FG V K I DG D
Sbjct: 4 NRKVKNNPDPTIYPVLDWNDIKFQDV------------IGEGNFGQVLKARIKKDGLRMD 51
Query: 299 VAIKVFNLQLERA-FRSFDSECEVLRNVRHR-NLIKILSSYSNPDFKALVLEFMPNGSLE 356
AIK + R F E EVL + H N+I +L + + + L +E+ P+G+L
Sbjct: 52 AAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLL 111
Query: 357 KWLYSHNYF---------------LDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKP 401
+L L + L+ DV ++YL S IH +L
Sbjct: 112 DFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL----SQKQFIHRNLAA 167
Query: 402 TNILLDENMVAHVSDFGIYKLLGEGED-SVRQTMTMATIGYMAPEYGLEGIVSAKCDVYS 460
NIL+ EN VA ++DFG L G++ V++TM + +MA E + + DV+S
Sbjct: 168 RNILVGENYVAKIADFG----LSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWS 223
Query: 461 YGVLLMETFT-RKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCI 519
YGVLL E + P M E+ E LP G ++C
Sbjct: 224 YGVLLWEIVSLGGTPYCGMTCAELY------EKLPQGYR-------------LEKPLNCD 264
Query: 520 LSIMDFALDCCMESPDMRINMTDAAAKLKKI 550
+ D C E P R + L ++
Sbjct: 265 DEVYDLMRQCWREKPYERPSFAQILVSLNRM 295
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 99/209 (47%), Gaps = 24/209 (11%)
Query: 280 LGTSSFGSVYKGTIS----DGTDVAIKVFNLQ---LERAFRSFDSECEVLRNVRHRNLIK 332
LG +FG VY+G +S D + + + V L E+ F E ++ H+N+++
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 333 IL--SSYSNPDFKALVLEFMPNGSLEKWLY------SHNYFLDILERLNIMIDVGSALEY 384
+ S S P F ++LE M G L+ +L S L +L+ L++ D+ +Y
Sbjct: 115 CIGVSLQSLPRF--ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 172
Query: 385 LHNGHSSVHIIHCDLKPTNILL---DENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGY 441
L H IH D+ N LL VA + DFG+ + + + M + +
Sbjct: 173 LEENH----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 228
Query: 442 MAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
M PE +EGI ++K D +S+GVLL E F+
Sbjct: 229 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 99/209 (47%), Gaps = 24/209 (11%)
Query: 280 LGTSSFGSVYKGTIS----DGTDVAIKVFNLQ---LERAFRSFDSECEVLRNVRHRNLIK 332
LG +FG VY+G +S D + + + V L E+ F E ++ H+N+++
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 333 IL--SSYSNPDFKALVLEFMPNGSLEKWLY------SHNYFLDILERLNIMIDVGSALEY 384
+ S S P F ++LE M G L+ +L S L +L+ L++ D+ +Y
Sbjct: 105 CIGVSLQSLPRF--ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 162
Query: 385 LHNGHSSVHIIHCDLKPTNILL---DENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGY 441
L H IH D+ N LL VA + DFG+ + + + M + +
Sbjct: 163 LEENH----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 218
Query: 442 MAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
M PE +EGI ++K D +S+GVLL E F+
Sbjct: 219 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 280 LGTSSFGSV---YKGTISDGTDVAIKVFNLQLE--RAFRSFDSECEVLRNVRHRNLIKIL 334
LG +FGSV + D T + V LQ R F E ++L+ + ++K
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 335 SSYSNPDFKAL--VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSV 392
P ++L V+E++P+G L +L H LD L + +EYL S
Sbjct: 79 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL----GSR 134
Query: 393 HIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDS-VRQTMTMATIGYMAPEYGLEGI 451
+H DL NIL++ ++DFG+ KLL +D V + + I + APE + I
Sbjct: 135 RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNI 194
Query: 452 VSAKCDVYSYGVLLMETFT 470
S + DV+S+GV+L E FT
Sbjct: 195 FSRQSDVWSFGVVLYELFT 213
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 99/209 (47%), Gaps = 24/209 (11%)
Query: 280 LGTSSFGSVYKGTIS----DGTDVAIKVFNLQ---LERAFRSFDSECEVLRNVRHRNLIK 332
LG +FG VY+G +S D + + + V L E+ F E ++ H+N+++
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 333 IL--SSYSNPDFKALVLEFMPNGSLEKWLY------SHNYFLDILERLNIMIDVGSALEY 384
+ S S P F ++LE M G L+ +L S L +L+ L++ D+ +Y
Sbjct: 125 CIGVSLQSLPRF--ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 182
Query: 385 LHNGHSSVHIIHCDLKPTNILL---DENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGY 441
L H IH D+ N LL VA + DFG+ + + + M + +
Sbjct: 183 LEENH----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 238
Query: 442 MAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
M PE +EGI ++K D +S+GVLL E F+
Sbjct: 239 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 89/194 (45%), Gaps = 6/194 (3%)
Query: 280 LGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSN 339
+G+ FG V+ G + VAIK + + F E EV+ + H L+++
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 340 PDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDL 399
LV EFM +G L +L + L + +DV + YL +IH DL
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAS----VIHRDL 129
Query: 400 KPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVY 459
N L+ EN V VSDFG+ + + + + T T + + +PE S+K DV+
Sbjct: 130 AARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 188
Query: 460 SYGVLLMETFTRKR 473
S+GVL+ E F+ +
Sbjct: 189 SFGVLMWEVFSEGK 202
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 280 LGTSSFGSV---YKGTISDGTDVAIKVFNLQLE--RAFRSFDSECEVLRNVRHRNLIKIL 334
LG +FGSV + D T + V LQ R F E ++L+ + ++K
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 335 SSYSNPDFKAL--VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSV 392
P ++L V+E++P+G L +L H LD L + +EYL S
Sbjct: 91 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL----GSR 146
Query: 393 HIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDS-VRQTMTMATIGYMAPEYGLEGI 451
+H DL NIL++ ++DFG+ KLL +D V + + I + APE + I
Sbjct: 147 RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNI 206
Query: 452 VSAKCDVYSYGVLLMETFT 470
S + DV+S+GV+L E FT
Sbjct: 207 FSRQSDVWSFGVVLYELFT 225
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 99/209 (47%), Gaps = 24/209 (11%)
Query: 280 LGTSSFGSVYKGTIS----DGTDVAIKVFNLQ---LERAFRSFDSECEVLRNVRHRNLIK 332
LG +FG VY+G +S D + + + V L E+ F E ++ H+N+++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 333 IL--SSYSNPDFKALVLEFMPNGSLEKWLY------SHNYFLDILERLNIMIDVGSALEY 384
+ S S P F ++LE M G L+ +L S L +L+ L++ D+ +Y
Sbjct: 99 CIGVSLQSLPRF--ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 385 LHNGHSSVHIIHCDLKPTNILL---DENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGY 441
L H IH D+ N LL VA + DFG+ + + + M + +
Sbjct: 157 LEENH----FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKW 212
Query: 442 MAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
M PE +EGI ++K D +S+GVLL E F+
Sbjct: 213 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 101/209 (48%), Gaps = 21/209 (10%)
Query: 278 NLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLERAFRSFD------SECEVLRNVRHRNL 330
+ LG +FG V G G VA+K+ N Q RS D E + L+ RH ++
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQ---KIRSLDVVGKIRREIQNLKLFRHPHI 78
Query: 331 IKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHS 390
IK+ S P +V+E++ G L ++ N LD E + + S ++Y H
Sbjct: 79 IKLYQVISTPSDIFMVMEYVSGGELFDYI-CKNGRLDEKESRRLFQQILSGVDYCHRHM- 136
Query: 391 SVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEG 450
++H DLKP N+LLD +M A ++DFG+ ++ +GE + + Y APE + G
Sbjct: 137 ---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE---FLRXSCGSPNYAAPEV-ISG 189
Query: 451 IVSA--KCDVYSYGVLLMETFTRKRPTDE 477
+ A + D++S GV+L P D+
Sbjct: 190 RLYAGPEVDIWSSGVILYALLCGTLPFDD 218
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 24/209 (11%)
Query: 280 LGTSSFGSVYKGTIS----DGTDVAIKVFNLQ---LERAFRSFDSECEVLRNVRHRNLIK 332
LG +FG VY+G +S D + + + V L E+ F E ++ H+N+++
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 333 IL--SSYSNPDFKALVLEFMPNGSLEKWLY------SHNYFLDILERLNIMIDVGSALEY 384
+ S S P F +++E M G L+ +L S L +L+ L++ D+ +Y
Sbjct: 98 CIGVSLQSLPRF--ILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 155
Query: 385 LHNGHSSVHIIHCDLKPTNILL---DENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGY 441
L H IH D+ N LL VA + DFG+ + + + M + +
Sbjct: 156 LEENH----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 211
Query: 442 MAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
M PE +EGI ++K D +S+GVLL E F+
Sbjct: 212 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 99/212 (46%), Gaps = 15/212 (7%)
Query: 268 QRATDEFNECNLLGTSSFGSVYKGTISDGTDV-AIKV-FNLQLERA--FRSFDSECEVLR 323
Q A ++F LG FG+VY + A+KV F QLE+A E E+
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 324 NVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALE 383
++RH N++++ + + L+LE+ P G + K L + F D + ++ +AL
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKF-DEQRTATYITELANALS 127
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
Y H S +IH D+KP N+LL ++DFG S R+ T+ Y+
Sbjct: 128 YCH----SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLXGTLDYLP 179
Query: 444 PEYGLEG-IVSAKCDVYSYGVLLMETFTRKRP 474
PE +EG + K D++S GVL E K P
Sbjct: 180 PEM-IEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 120/295 (40%), Gaps = 49/295 (16%)
Query: 278 NLLGTSSFGSVYKGTIS-DG--TDVAIKVFNLQLERA-FRSFDSECEVLRNVRHR-NLIK 332
+++G +FG V K I DG D AIK + R F E EVL + H N+I
Sbjct: 21 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 80
Query: 333 ILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYF---------------LDILERLNIMID 377
+L + + + L +E+ P+G+L +L L + L+ D
Sbjct: 81 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 140
Query: 378 VGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGED-SVRQTMTM 436
V ++YL S IH DL NIL+ EN VA ++DFG L G++ V++TM
Sbjct: 141 VARGMDYL----SQKQFIHRDLAARNILVGENYVAKIADFG----LSRGQEVYVKKTMGR 192
Query: 437 ATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRRWVKESLPH 495
+ +MA E + + DV+SYGVLL E + P M E+ E LP
Sbjct: 193 LPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELY------EKLPQ 246
Query: 496 GLTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKI 550
G ++C + D C E P R + L ++
Sbjct: 247 GYR-------------LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 288
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 92/209 (44%), Gaps = 13/209 (6%)
Query: 272 DEFNECNLLGTSSFGSVYKGTISDGTDV-AIKV-FNLQLER--AFRSFDSECEVLRNVRH 327
D+F+ LG FG+VY + A+KV F QLE+ E E+ ++RH
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
N++++ + + + L+LEF P G L K L H F D M ++ AL Y H
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRF-DEQRSATFMEELADALHYCHE 132
Query: 388 GHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYG 447
+IH D+KP N+L+ ++DFG S+R+ T+ Y+ PE
Sbjct: 133 R----KVIHRDIKPENLLMGYKGELKIADFG----WSVHAPSLRRRXMCGTLDYLPPEMI 184
Query: 448 LEGIVSAKCDVYSYGVLLMETFTRKRPTD 476
K D++ GVL E P D
Sbjct: 185 EGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 89/194 (45%), Gaps = 6/194 (3%)
Query: 280 LGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSN 339
+G+ FG V+ G + VAIK + + F E EV+ + H L+++
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 76
Query: 340 PDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDL 399
LV EFM +G L +L + L + +DV + YL +IH DL
Sbjct: 77 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC----VIHRDL 132
Query: 400 KPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVY 459
N L+ EN V VSDFG+ + + + + T T + + +PE S+K DV+
Sbjct: 133 AARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 191
Query: 460 SYGVLLMETFTRKR 473
S+GVL+ E F+ +
Sbjct: 192 SFGVLMWEVFSEGK 205
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 94/208 (45%), Gaps = 20/208 (9%)
Query: 280 LGTSSFGSVYKGTISD-GTDVAIKVFNLQLERAFRS-FDSECEVLRNVRHRNLIKI---- 333
LGT FG V + D G VAIK +L R + E ++++ + H N++
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 82
Query: 334 --LSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILER--LNIMIDVGSALEYLHNGH 389
L + D L +E+ G L K+L + E ++ D+ SAL YLH
Sbjct: 83 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR 142
Query: 390 SSVHIIHCDLKPTNILLD---ENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEY 446
IIH DLKP NI+L + ++ + D G K L +GE T + T+ Y+APE
Sbjct: 143 ----IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELC---TEFVGTLQYLAPEL 195
Query: 447 GLEGIVSAKCDVYSYGVLLMETFTRKRP 474
+ + D +S+G L E T RP
Sbjct: 196 LEQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 101/212 (47%), Gaps = 15/212 (7%)
Query: 268 QRATDEFNECNLLGTSSFGSVYKGTISDGTDV-AIKV-FNLQLERA--FRSFDSECEVLR 323
Q A ++F LG FG+VY + A+KV F QLE+A E E+
Sbjct: 8 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 67
Query: 324 NVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALE 383
++RH N++++ + + L+LE+ P G++ + L + F D + ++ +AL
Sbjct: 68 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 126
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
Y H S +IH D+KP N+LL ++DFG S R+T T+ Y+
Sbjct: 127 YCH----SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLP 178
Query: 444 PEYGLEG-IVSAKCDVYSYGVLLMETFTRKRP 474
PE +EG + K D++S GVL E K P
Sbjct: 179 PEM-IEGRMHDEKVDLWSLGVLCYEFLVGKPP 209
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 99/209 (47%), Gaps = 24/209 (11%)
Query: 280 LGTSSFGSVYKGTIS----DGTDVAIKVFNLQ---LERAFRSFDSECEVLRNVRHRNLIK 332
LG +FG VY+G +S D + + + V L E+ F E ++ H+N+++
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 333 IL--SSYSNPDFKALVLEFMPNGSLEKWLY------SHNYFLDILERLNIMIDVGSALEY 384
+ S S P F ++LE M G L+ +L S L +L+ L++ D+ +Y
Sbjct: 116 CIGVSLQSLPRF--ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 173
Query: 385 LHNGHSSVHIIHCDLKPTNILL---DENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGY 441
L H IH D+ N LL VA + DFG+ + + + M + +
Sbjct: 174 LEENH----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKW 229
Query: 442 MAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
M PE +EGI ++K D +S+GVLL E F+
Sbjct: 230 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 120/295 (40%), Gaps = 49/295 (16%)
Query: 278 NLLGTSSFGSVYKGTIS-DG--TDVAIKVFNLQLERA-FRSFDSECEVLRNVRHR-NLIK 332
+++G +FG V K I DG D AIK + R F E EVL + H N+I
Sbjct: 31 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 90
Query: 333 ILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYF---------------LDILERLNIMID 377
+L + + + L +E+ P+G+L +L L + L+ D
Sbjct: 91 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 150
Query: 378 VGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGED-SVRQTMTM 436
V ++YL S IH DL NIL+ EN VA ++DFG L G++ V++TM
Sbjct: 151 VARGMDYL----SQKQFIHRDLAARNILVGENYVAKIADFG----LSRGQEVYVKKTMGR 202
Query: 437 ATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRRWVKESLPH 495
+ +MA E + + DV+SYGVLL E + P M E+ E LP
Sbjct: 203 LPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELY------EKLPQ 256
Query: 496 GLTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKI 550
G ++C + D C E P R + L ++
Sbjct: 257 GYR-------------LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 298
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 101/212 (47%), Gaps = 15/212 (7%)
Query: 268 QRATDEFNECNLLGTSSFGSVYKGTISDGTDV-AIKV-FNLQLERA--FRSFDSECEVLR 323
Q A ++F LG FG+VY + A+KV F QLE+A E E+
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 324 NVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALE 383
++RH N++++ + + L+LE+ P G++ + L + F D + ++ +AL
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 122
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
Y H S +IH D+KP N+LL ++DFG S R+T T+ Y+
Sbjct: 123 YCH----SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLP 174
Query: 444 PEYGLEG-IVSAKCDVYSYGVLLMETFTRKRP 474
PE +EG + K D++S GVL E K P
Sbjct: 175 PEM-IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 89/194 (45%), Gaps = 6/194 (3%)
Query: 280 LGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSN 339
+G+ FG V+ G + VAIK + + F E EV+ + H L+++
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 340 PDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDL 399
LV EFM +G L +L + L + +DV + YL +IH DL
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC----VIHRDL 129
Query: 400 KPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVY 459
N L+ EN V VSDFG+ + + + + T T + + +PE S+K DV+
Sbjct: 130 AARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 188
Query: 460 SYGVLLMETFTRKR 473
S+GVL+ E F+ +
Sbjct: 189 SFGVLMWEVFSEGK 202
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 101/212 (47%), Gaps = 15/212 (7%)
Query: 268 QRATDEFNECNLLGTSSFGSVYKGTISDGTDV-AIKV-FNLQLERA--FRSFDSECEVLR 323
Q A ++F LG FG+VY + A+KV F QLE+A E E+
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 324 NVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALE 383
++RH N++++ + + L+LE+ P G++ + L + F D + ++ +AL
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 122
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
Y H S +IH D+KP N+LL ++DFG S R+T T+ Y+
Sbjct: 123 YCH----SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTXLCGTLDYLP 174
Query: 444 PEYGLEG-IVSAKCDVYSYGVLLMETFTRKRP 474
PE +EG + K D++S GVL E K P
Sbjct: 175 PEM-IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 94/208 (45%), Gaps = 20/208 (9%)
Query: 280 LGTSSFGSVYKGTISD-GTDVAIKVFNLQLERAFRS-FDSECEVLRNVRHRNLIKI---- 333
LGT FG V + D G VAIK +L R + E ++++ + H N++
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 81
Query: 334 --LSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILER--LNIMIDVGSALEYLHNGH 389
L + D L +E+ G L K+L + E ++ D+ SAL YLH
Sbjct: 82 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR 141
Query: 390 SSVHIIHCDLKPTNILLD---ENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEY 446
IIH DLKP NI+L + ++ + D G K L +GE T + T+ Y+APE
Sbjct: 142 ----IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELC---TEFVGTLQYLAPEL 194
Query: 447 GLEGIVSAKCDVYSYGVLLMETFTRKRP 474
+ + D +S+G L E T RP
Sbjct: 195 LEQKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 124/291 (42%), Gaps = 44/291 (15%)
Query: 280 LGTSSFGSVYKGTI------SDGTDVAIKVFNLQLERAFRS-FDSECEVLRNVRHRNLIK 332
LG FG VYKG + VAIK + E R F E + ++H N++
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 333 ILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDI------------LER---LNIMID 377
+L + +++ + +G L ++L + D+ LE ++++
Sbjct: 77 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 136
Query: 378 VGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMA 437
+ + +EYL SS H++H DL N+L+ + + +SD G+++ + + ++
Sbjct: 137 IAAGMEYL----SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLL 192
Query: 438 TIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGL 497
I +MAPE + G S D++SYGV+L E F+ ++ +
Sbjct: 193 PIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYG----------------LQPYCGYSN 236
Query: 498 TEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLK 548
+VV+ ++R Q DC + ++C E P R D ++L+
Sbjct: 237 QDVVE--MIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLR 285
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 89/194 (45%), Gaps = 6/194 (3%)
Query: 280 LGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSN 339
+G+ FG V+ G + VAIK + + F E EV+ + H L+++
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 71
Query: 340 PDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDL 399
LV EFM +G L +L + L + +DV + YL +IH DL
Sbjct: 72 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC----VIHRDL 127
Query: 400 KPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVY 459
N L+ EN V VSDFG+ + + + + T T + + +PE S+K DV+
Sbjct: 128 AARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 186
Query: 460 SYGVLLMETFTRKR 473
S+GVL+ E F+ +
Sbjct: 187 SFGVLMWEVFSEGK 200
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 124/291 (42%), Gaps = 44/291 (15%)
Query: 280 LGTSSFGSVYKGTI------SDGTDVAIKVFNLQLERAFRS-FDSECEVLRNVRHRNLIK 332
LG FG VYKG + VAIK + E R F E + ++H N++
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 93
Query: 333 ILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDI------------LER---LNIMID 377
+L + +++ + +G L ++L + D+ LE ++++
Sbjct: 94 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 153
Query: 378 VGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMA 437
+ + +EYL SS H++H DL N+L+ + + +SD G+++ + + ++
Sbjct: 154 IAAGMEYL----SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLL 209
Query: 438 TIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGL 497
I +MAPE + G S D++SYGV+L E F+ ++ +
Sbjct: 210 PIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYG----------------LQPYCGYSN 253
Query: 498 TEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLK 548
+VV+ ++R Q DC + ++C E P R D ++L+
Sbjct: 254 QDVVE--MIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLR 302
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 13/211 (6%)
Query: 268 QRATDEFNECNLLGTSSFGSVYKGTISDGTDV-AIKV-FNLQLERA--FRSFDSECEVLR 323
Q A ++F LG FG+VY + A+KV F QLE+A E E+
Sbjct: 3 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 62
Query: 324 NVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALE 383
++RH N++++ + + L+LE+ P G++ + L + F D + ++ +AL
Sbjct: 63 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 121
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
Y H S +IH D+KP N+LL ++DFG S R+T T+ Y+
Sbjct: 122 YCH----SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLP 173
Query: 444 PEYGLEGIVSAKCDVYSYGVLLMETFTRKRP 474
PE + K D++S GVL E K P
Sbjct: 174 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 204
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 24/209 (11%)
Query: 280 LGTSSFGSVYKGTIS----DGTDVAIKVFNLQ---LERAFRSFDSECEVLRNVRHRNLIK 332
LG +FG VY+G +S D + + + V L E+ F E ++ H+N+++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 333 IL--SSYSNPDFKALVLEFMPNGSLEKWLY------SHNYFLDILERLNIMIDVGSALEY 384
+ S S P F +++E M G L+ +L S L +L+ L++ D+ +Y
Sbjct: 113 CIGVSLQSLPRF--ILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 385 LHNGHSSVHIIHCDLKPTNILL---DENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGY 441
L H IH D+ N LL VA + DFG+ + + + M + +
Sbjct: 171 LEENH----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 226
Query: 442 MAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
M PE +EGI ++K D +S+GVLL E F+
Sbjct: 227 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 138/317 (43%), Gaps = 51/317 (16%)
Query: 272 DEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRN--VRHRN 329
D L+G +G+VYKG++ D VA+KVF+ + +F +E + R + H N
Sbjct: 13 DNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQ---NFINEKNIYRVPLMEHDN 68
Query: 330 LIKIL--SSYSNPDFKA---LVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEY 384
+ + + D + LV+E+ PNGSL K+L H D + + V L Y
Sbjct: 69 IARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS--DWVSSCRLAHSVTRGLAY 126
Query: 385 LHN-----GHSSVHIIHCDLKPTNILLDENMVAHVSDFGIY------KLLGEGEDSVRQT 433
LH H I H DL N+L+ + +SDFG+ +L+ GE+
Sbjct: 127 LHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAI 186
Query: 434 MTMATIGYMAPEYGLEGIVS--------AKCDVYSYGVLLMETFTRKRPTDEMFIGE--- 482
+ TI YMAPE LEG V+ + D+Y+ G++ E F R ++F GE
Sbjct: 187 SEVGTIRYMAPEV-LEGAVNLRDXESALKQVDMYALGLIYWEIFMR---CTDLFPGESVP 242
Query: 483 ---MSLRRWVKESLPHGLTEVVDANLVREEQ------AFSAKMDCILSIMDFALDCCMES 533
M+ + V H E + + RE+Q A+ + S+ + DC +
Sbjct: 243 EYQMAFQTEVGN---HPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQD 299
Query: 534 PDMRINMTDAAAKLKKI 550
+ R+ A ++ ++
Sbjct: 300 AEARLTAQXAEERMAEL 316
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 101/212 (47%), Gaps = 15/212 (7%)
Query: 268 QRATDEFNECNLLGTSSFGSVYKGTISDGTDV-AIKV-FNLQLERA--FRSFDSECEVLR 323
Q A ++F LG FG+VY + A+KV F QLE+A E E+
Sbjct: 30 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 89
Query: 324 NVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALE 383
++RH N++++ + + L+LE+ P G++ + L + F D + ++ +AL
Sbjct: 90 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 148
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
Y H S +IH D+KP N+LL ++DFG S R+T T+ Y+
Sbjct: 149 YCH----SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLP 200
Query: 444 PEYGLEG-IVSAKCDVYSYGVLLMETFTRKRP 474
PE +EG + K D++S GVL E K P
Sbjct: 201 PEM-IEGRMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 99/209 (47%), Gaps = 24/209 (11%)
Query: 280 LGTSSFGSVYKGTIS----DGTDVAIKVFNLQ---LERAFRSFDSECEVLRNVRHRNLIK 332
LG +FG VY+G +S D + + + V L E+ F E ++ H+N+++
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 333 IL--SSYSNPDFKALVLEFMPNGSLEKWLY------SHNYFLDILERLNIMIDVGSALEY 384
+ S S P F ++LE M G L+ +L S L +L+ L++ D+ +Y
Sbjct: 139 CIGVSLQSLPRF--ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 196
Query: 385 LHNGHSSVHIIHCDLKPTNILL---DENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGY 441
L H IH D+ N LL VA + DFG+ + + + M + +
Sbjct: 197 LEENH----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKW 252
Query: 442 MAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
M PE +EGI ++K D +S+GVLL E F+
Sbjct: 253 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 101/212 (47%), Gaps = 15/212 (7%)
Query: 268 QRATDEFNECNLLGTSSFGSVYKGTISDGTDV-AIKV-FNLQLERA--FRSFDSECEVLR 323
Q A ++F LG FG+VY + A+KV F QLE+A E E+
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 324 NVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALE 383
++RH N++++ + + L+LE+ P G++ + L + F D + ++ +AL
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 127
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
Y H S +IH D+KP N+LL ++DFG S R+T T+ Y+
Sbjct: 128 YCH----SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLP 179
Query: 444 PEYGLEG-IVSAKCDVYSYGVLLMETFTRKRP 474
PE +EG + K D++S GVL E K P
Sbjct: 180 PEM-IEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 92/209 (44%), Gaps = 13/209 (6%)
Query: 272 DEFNECNLLGTSSFGSVYKGTISDGTDV-AIKV-FNLQLER--AFRSFDSECEVLRNVRH 327
D+F+ LG FG+VY + A+KV F QLE+ E E+ ++RH
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
N++++ + + + L+LEF P G L K L H F D M ++ AL Y H
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRF-DEQRSATFMEELADALHYCHE 132
Query: 388 GHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYG 447
+IH D+KP N+L+ ++DFG S+R+ T+ Y+ PE
Sbjct: 133 R----KVIHRDIKPENLLMGYKGELKIADFG----WSVHAPSLRRRXMCGTLDYLPPEMI 184
Query: 448 LEGIVSAKCDVYSYGVLLMETFTRKRPTD 476
K D++ GVL E P D
Sbjct: 185 EGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 13/211 (6%)
Query: 268 QRATDEFNECNLLGTSSFGSVYKGTISDGTDV-AIKV-FNLQLERA--FRSFDSECEVLR 323
Q A ++F LG FG+VY + A+KV F QLE+A E E+
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 324 NVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALE 383
++RH N++++ + + L+LE+ P G++ + L + F D + ++ +AL
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 125
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
Y H S +IH D+KP N+LL ++DFG S R+T T+ Y+
Sbjct: 126 YCH----SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLP 177
Query: 444 PEYGLEGIVSAKCDVYSYGVLLMETFTRKRP 474
PE + K D++S GVL E K P
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 89/194 (45%), Gaps = 6/194 (3%)
Query: 280 LGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSN 339
+G+ FG V+ G + VAIK + + F E EV+ + H L+++
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIK-EGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLE 93
Query: 340 PDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDL 399
LV EFM +G L +L + L + +DV + YL +IH DL
Sbjct: 94 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC----VIHRDL 149
Query: 400 KPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVY 459
N L+ EN V VSDFG+ + + + + T T + + +PE S+K DV+
Sbjct: 150 AARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 208
Query: 460 SYGVLLMETFTRKR 473
S+GVL+ E F+ +
Sbjct: 209 SFGVLMWEVFSEGK 222
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 13/211 (6%)
Query: 268 QRATDEFNECNLLGTSSFGSVYKGTISDGTDV-AIKV-FNLQLERA--FRSFDSECEVLR 323
Q A ++F LG FG+VY + A+KV F QLE+A E E+
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 324 NVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALE 383
++RH N++++ + + L+LE+ P G++ + L + F D + ++ +AL
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 125
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
Y H S +IH D+KP N+LL ++DFG S R+T T+ Y+
Sbjct: 126 YCH----SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLP 177
Query: 444 PEYGLEGIVSAKCDVYSYGVLLMETFTRKRP 474
PE + K D++S GVL E K P
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 107/225 (47%), Gaps = 16/225 (7%)
Query: 268 QRATDEFNECNLLGTSSFGSVYKGTISDGTDV-AIKV-FNLQLERA--FRSFDSECEVLR 323
Q ++F+ LG FG+VY + A+KV F QLE+A E E+
Sbjct: 8 QWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQS 67
Query: 324 NVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALE 383
++RH N++++ + + L+LE+ P G++ + L + F D + ++ +AL
Sbjct: 68 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRF-DEQRTATYITELANALS 126
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
Y H S +IH D+KP N+LL N ++DFG S R+T T+ Y+
Sbjct: 127 YCH----SKRVIHRDIKPENLLLGSNGELKIADFG----WSVHAPSSRRTTLCGTLDYLP 178
Query: 444 PEYGLEG-IVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRR 487
PE +EG + K D++S GVL E F P E + + RR
Sbjct: 179 PEM-IEGRMHDEKVDLWSLGVLCYE-FLVGMPPFEAHTYQETYRR 221
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 13/211 (6%)
Query: 268 QRATDEFNECNLLGTSSFGSVYKGTISDGTDV-AIKV-FNLQLERA--FRSFDSECEVLR 323
Q A ++F LG FG+VY + A+KV F QLE+A E E+
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 324 NVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALE 383
++RH N++++ + + L+LE+ P G++ + L + F D + ++ +AL
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 122
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
Y H S +IH D+KP N+LL ++DFG S R+T T+ Y+
Sbjct: 123 YCH----SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTELCGTLDYLP 174
Query: 444 PEYGLEGIVSAKCDVYSYGVLLMETFTRKRP 474
PE + K D++S GVL E K P
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 97/204 (47%), Gaps = 14/204 (6%)
Query: 280 LGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKI--LSSY 337
LGT FG V G DVAIK+ + + F E +V+ N+ H L+++ + +
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 338 SNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHC 397
P F ++ E+M NG L +L + + L + DV A+EYL S +H
Sbjct: 91 QRPIF--IITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE----SKQFLHR 144
Query: 398 DLKPTNILLDENMVAHVSDFGI--YKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAK 455
DL N L+++ V VSDFG+ Y L E SV + + PE + S+K
Sbjct: 145 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF---PVRWSPPEVLMYSKFSSK 201
Query: 456 CDVYSYGVLLMETFTRKRPTDEMF 479
D++++GVL+ E ++ + E F
Sbjct: 202 SDIWAFGVLMWEIYSLGKMPYERF 225
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 92/209 (44%), Gaps = 13/209 (6%)
Query: 272 DEFNECNLLGTSSFGSVYKGTISDGTDV-AIKV-FNLQLER--AFRSFDSECEVLRNVRH 327
D+F+ LG FG+VY + A+KV F QLE+ E E+ ++RH
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
N++++ + + + L+LEF P G L K L H F D M ++ AL Y H
Sbjct: 75 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRF-DEQRSATFMEELADALHYCHE 133
Query: 388 GHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYG 447
+IH D+KP N+L+ ++DFG S+R+ T+ Y+ PE
Sbjct: 134 R----KVIHRDIKPENLLMGYKGELKIADFG----WSVHAPSLRRRXMCGTLDYLPPEMI 185
Query: 448 LEGIVSAKCDVYSYGVLLMETFTRKRPTD 476
K D++ GVL E P D
Sbjct: 186 EGKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 109/221 (49%), Gaps = 14/221 (6%)
Query: 265 LDIQRATDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLERAFRSFDSECEVLR 323
L+ DE + +LG ++G VY G +S+ +AIK + R + E + +
Sbjct: 15 LEYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHK 74
Query: 324 NVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERL--NIMIDVGSA 381
+++H+N+++ L S+S F + +E +P GSL L S L E+ +
Sbjct: 75 HLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEG 134
Query: 382 LEYLHNGHSSVHIIHCDLKPTNILLDE-NMVAHVSDFGIYKLLGEGEDSVRQTMTMATIG 440
L+YLH+ I+H D+K N+L++ + V +SDFG K L G + +T T T+
Sbjct: 135 LKYLHDN----QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA-GINPCTETFT-GTLQ 188
Query: 441 YMAPE---YGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEM 478
YMAPE G G A D++S G ++E T K P E+
Sbjct: 189 YMAPEIIDKGPRGYGKA-ADIWSLGCTIIEMATGKPPFYEL 228
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 99/202 (49%), Gaps = 10/202 (4%)
Query: 280 LGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKI--LSSY 337
LGT FG V G DVAIK+ + + F E +V+ N+ H L+++ + +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 338 SNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHC 397
P F ++ E+M NG L +L + + L + DV A+EYL S +H
Sbjct: 76 QRPIF--IITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL----ESKQFLHR 129
Query: 398 DLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCD 457
DL N L+++ V VSDFG+ + + + E + + + + + PE + S+K D
Sbjct: 130 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRG-SKFPVRWSPPEVLMYSKFSSKSD 188
Query: 458 VYSYGVLLMETFTRKRPTDEMF 479
++++GVL+ E ++ + E F
Sbjct: 189 IWAFGVLMWEIYSLGKMPYERF 210
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 101/212 (47%), Gaps = 15/212 (7%)
Query: 268 QRATDEFNECNLLGTSSFGSVYKGTISDGTDV-AIKV-FNLQLERA--FRSFDSECEVLR 323
Q A ++F LG FG+VY + A+KV F QLE+A E E+
Sbjct: 21 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 80
Query: 324 NVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALE 383
++RH N++++ + + L+LE+ P G++ + L + F D + ++ +AL
Sbjct: 81 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 139
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
Y H S +IH D+KP N+LL ++DFG S R+T T+ Y+
Sbjct: 140 YCH----SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLP 191
Query: 444 PEYGLEG-IVSAKCDVYSYGVLLMETFTRKRP 474
PE +EG + K D++S GVL E K P
Sbjct: 192 PEM-IEGRMHDEKVDLWSLGVLCYEFLVGKPP 222
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 109/221 (49%), Gaps = 14/221 (6%)
Query: 265 LDIQRATDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLERAFRSFDSECEVLR 323
L+ DE + +LG ++G VY G +S+ +AIK + R + E + +
Sbjct: 1 LEYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHK 60
Query: 324 NVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERL--NIMIDVGSA 381
+++H+N+++ L S+S F + +E +P GSL L S L E+ +
Sbjct: 61 HLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEG 120
Query: 382 LEYLHNGHSSVHIIHCDLKPTNILLDE-NMVAHVSDFGIYKLLGEGEDSVRQTMTMATIG 440
L+YLH+ I+H D+K N+L++ + V +SDFG K L G + +T T T+
Sbjct: 121 LKYLHDN----QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA-GINPCTETFT-GTLQ 174
Query: 441 YMAPEY---GLEGIVSAKCDVYSYGVLLMETFTRKRPTDEM 478
YMAPE G G A D++S G ++E T K P E+
Sbjct: 175 YMAPEIIDKGPRGYGKA-ADIWSLGCTIIEMATGKPPFYEL 214
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 89/194 (45%), Gaps = 6/194 (3%)
Query: 280 LGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSN 339
+G+ FG V+ G + VAIK + + F E EV+ + H L+++
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 74
Query: 340 PDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDL 399
LV EFM +G L +L + L + +DV + YL +IH DL
Sbjct: 75 QAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC----VIHRDL 130
Query: 400 KPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVY 459
N L+ EN V VSDFG+ + + + + T T + + +PE S+K DV+
Sbjct: 131 AARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 189
Query: 460 SYGVLLMETFTRKR 473
S+GVL+ E F+ +
Sbjct: 190 SFGVLMWEVFSEGK 203
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 13/211 (6%)
Query: 268 QRATDEFNECNLLGTSSFGSVYKGTISDGTDV-AIKV-FNLQLERA--FRSFDSECEVLR 323
Q A ++F LG FG+VY + A+KV F QLE+A E E+
Sbjct: 1 QWALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQS 60
Query: 324 NVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALE 383
++RH N++++ + + L+LE+ P G++ + L + F D + ++ +AL
Sbjct: 61 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 119
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
Y H S +IH D+KP N+LL ++DFG S R+T T+ Y+
Sbjct: 120 YCH----SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLP 171
Query: 444 PEYGLEGIVSAKCDVYSYGVLLMETFTRKRP 474
PE + K D++S GVL E K P
Sbjct: 172 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 202
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 101/212 (47%), Gaps = 15/212 (7%)
Query: 268 QRATDEFNECNLLGTSSFGSVYKGTISDGTDV-AIKV-FNLQLERA--FRSFDSECEVLR 323
Q A ++F LG FG+VY + A+KV F QLE+A E E+
Sbjct: 5 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 64
Query: 324 NVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALE 383
++RH N++++ + + L+LE+ P G++ + L + F D + ++ +AL
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 123
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
Y H S +IH D+KP N+LL ++DFG S R+T T+ Y+
Sbjct: 124 YCH----SKRVIHRDIKPENLLLGSAGELKIADFG----WSCHAPSSRRTTLSGTLDYLP 175
Query: 444 PEYGLEG-IVSAKCDVYSYGVLLMETFTRKRP 474
PE +EG + K D++S GVL E K P
Sbjct: 176 PEM-IEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 97/204 (47%), Gaps = 14/204 (6%)
Query: 280 LGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKI--LSSY 337
LGT FG V G DVAIK+ + + F E +V+ N+ H L+++ + +
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 81
Query: 338 SNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHC 397
P F ++ E+M NG L +L + + L + DV A+EYL S +H
Sbjct: 82 QRPIF--IITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE----SKQFLHR 135
Query: 398 DLKPTNILLDENMVAHVSDFGI--YKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAK 455
DL N L+++ V VSDFG+ Y L E SV + + PE + S+K
Sbjct: 136 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF---PVRWSPPEVLMYSKFSSK 192
Query: 456 CDVYSYGVLLMETFTRKRPTDEMF 479
D++++GVL+ E ++ + E F
Sbjct: 193 SDIWAFGVLMWEIYSLGKMPYERF 216
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 97/204 (47%), Gaps = 14/204 (6%)
Query: 280 LGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKI--LSSY 337
LGT FG V G DVAIK+ + + F E +V+ N+ H L+++ + +
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 70
Query: 338 SNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHC 397
P F ++ E+M NG L +L + + L + DV A+EYL S +H
Sbjct: 71 QRPIF--IITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL----ESKQFLHR 124
Query: 398 DLKPTNILLDENMVAHVSDFGI--YKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAK 455
DL N L+++ V VSDFG+ Y L E SV + + PE + S+K
Sbjct: 125 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF---PVRWSPPEVLMYSKFSSK 181
Query: 456 CDVYSYGVLLMETFTRKRPTDEMF 479
D++++GVL+ E ++ + E F
Sbjct: 182 SDIWAFGVLMWEIYSLGKMPYERF 205
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 13/211 (6%)
Query: 268 QRATDEFNECNLLGTSSFGSVYKGTISDGTDV-AIKV-FNLQLERA--FRSFDSECEVLR 323
Q A ++F LG FG+VY + A+KV F QLE+A E E+
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 324 NVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALE 383
++RH N++++ + + L+LE+ P G++ + L + F D + ++ +AL
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 122
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
Y H S +IH D+KP N+LL ++DFG S R+T T+ Y+
Sbjct: 123 YCH----SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYLP 174
Query: 444 PEYGLEGIVSAKCDVYSYGVLLMETFTRKRP 474
PE + K D++S GVL E K P
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 97/204 (47%), Gaps = 14/204 (6%)
Query: 280 LGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKI--LSSY 337
LGT FG V G DVAIK+ + + F E +V+ N+ H L+++ + +
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 74
Query: 338 SNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHC 397
P F ++ E+M NG L +L + + L + DV A+EYL S +H
Sbjct: 75 QRPIF--IITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL----ESKQFLHR 128
Query: 398 DLKPTNILLDENMVAHVSDFGI--YKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAK 455
DL N L+++ V VSDFG+ Y L E SV + + PE + S+K
Sbjct: 129 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF---PVRWSPPEVLMYSKFSSK 185
Query: 456 CDVYSYGVLLMETFTRKRPTDEMF 479
D++++GVL+ E ++ + E F
Sbjct: 186 SDIWAFGVLMWEIYSLGKMPYERF 209
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 100/212 (47%), Gaps = 15/212 (7%)
Query: 268 QRATDEFNECNLLGTSSFGSVYKGTISDGTDV-AIKV-FNLQLERA--FRSFDSECEVLR 323
Q A ++F LG FG+VY + A+KV F QLE+A E E+
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 324 NVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALE 383
++RH N++++ + + L+LE+ P G++ + L + F D + ++ +AL
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 127
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
Y H S +IH D+KP N+LL ++DFG S R+T T+ Y+
Sbjct: 128 YCH----SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLP 179
Query: 444 PEYGLEGIV-SAKCDVYSYGVLLMETFTRKRP 474
PE +EG K D++S GVL E K P
Sbjct: 180 PE-XIEGRXHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 13/211 (6%)
Query: 268 QRATDEFNECNLLGTSSFGSVYKGTISDGTDV-AIKV-FNLQLERA--FRSFDSECEVLR 323
Q A ++F LG FG+VY + A+KV F QLE+A E E+
Sbjct: 5 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 64
Query: 324 NVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALE 383
++RH N++++ + + L+LE+ P G++ + L + F D + ++ +AL
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 123
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
Y H S +IH D+KP N+LL ++DFG S R+T T+ Y+
Sbjct: 124 YCH----SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYLP 175
Query: 444 PEYGLEGIVSAKCDVYSYGVLLMETFTRKRP 474
PE + K D++S GVL E K P
Sbjct: 176 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 13/211 (6%)
Query: 268 QRATDEFNECNLLGTSSFGSVYKGTISDGTDV-AIKV-FNLQLERA--FRSFDSECEVLR 323
Q A ++F LG FG+VY + A+KV F QLE+A E E+
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 324 NVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALE 383
++RH N++++ + + L+LE+ P G++ + L + F D + ++ +AL
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 122
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
Y H S +IH D+KP N+LL ++DFG S R+T T+ Y+
Sbjct: 123 YCH----SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYLP 174
Query: 444 PEYGLEGIVSAKCDVYSYGVLLMETFTRKRP 474
PE + K D++S GVL E K P
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 97/204 (47%), Gaps = 14/204 (6%)
Query: 280 LGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKI--LSSY 337
LGT FG V G DVAIK+ + + F E +V+ N+ H L+++ + +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 338 SNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHC 397
P F ++ E+M NG L +L + + L + DV A+EYL S +H
Sbjct: 76 QRPIF--IITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL----ESKQFLHR 129
Query: 398 DLKPTNILLDENMVAHVSDFGI--YKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAK 455
DL N L+++ V VSDFG+ Y L E SV + + PE + S+K
Sbjct: 130 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF---PVRWSPPEVLMYSKFSSK 186
Query: 456 CDVYSYGVLLMETFTRKRPTDEMF 479
D++++GVL+ E ++ + E F
Sbjct: 187 SDIWAFGVLMWEIYSLGKMPYERF 210
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 13/211 (6%)
Query: 268 QRATDEFNECNLLGTSSFGSVYKGTISDGTDV-AIKV-FNLQLERA--FRSFDSECEVLR 323
Q A ++F LG FG+VY + A+KV F QLE+A E E+
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 324 NVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALE 383
++RH N++++ + + L+LE+ P G++ + L + F D + ++ +AL
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 127
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
Y H S +IH D+KP N+LL ++DFG S R+T T+ Y+
Sbjct: 128 YCH----SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYLP 179
Query: 444 PEYGLEGIVSAKCDVYSYGVLLMETFTRKRP 474
PE + K D++S GVL E K P
Sbjct: 180 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 122/285 (42%), Gaps = 31/285 (10%)
Query: 273 EFNECNLLGTSSFGSVYKGT-ISDGT----DVAIKVFNLQL-ERAFRSFDSECEVLRNVR 326
E +LG+ +FG+VYKG + +G VAIK+ N +A F E ++ ++
Sbjct: 39 ELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMD 98
Query: 327 HRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLH 386
H +L+++L +P + LV + MP+G L ++++ H + LN + + + YL
Sbjct: 99 HPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYL- 156
Query: 387 NGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEY 446
++H DL N+L+ ++DFG+ +LL E I +MA E
Sbjct: 157 ---EERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALEC 213
Query: 447 GLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANL 505
+ + DV+SYGV + E T +P D + E+ +L
Sbjct: 214 IHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIP-------------------DL 254
Query: 506 VREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKI 550
+ + + C + + + C M D R + AA+ ++
Sbjct: 255 LEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRM 299
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 93/194 (47%), Gaps = 10/194 (5%)
Query: 280 LGTSSFGSVYKGTISDGT-DVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYS 338
LG +G VY G + VA+K + F E V++ ++H NL+++L +
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 98
Query: 339 -NPDFKALVLEFMPNGSLEKWLYSHNYF-LDILERLNIMIDVGSALEYLHNGHSSVHIIH 396
P F +V E+MP G+L +L N + + L + + SA+EYL + IH
Sbjct: 99 LEPPF-YIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKN----FIH 153
Query: 397 CDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKC 456
DL N L+ EN V V+DFG+ +L+ G+ I + APE S K
Sbjct: 154 RDLAARNCLVGENHVVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNTFSIKS 212
Query: 457 DVYSYGVLLMETFT 470
DV+++GVLL E T
Sbjct: 213 DVWAFGVLLWEIAT 226
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 97/211 (45%), Gaps = 26/211 (12%)
Query: 279 LLGTSSFGSVYKGTISDGTDVAIKVF----NLQLERAFRSFDSECEVLRNVRHRNLIKIL 334
++G FG VY+ G +VA+K + + + + E ++ ++H N+I +
Sbjct: 14 IIGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALR 72
Query: 335 SSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHI 394
LV+EF G L + L DIL +N + + + YLH+ + V I
Sbjct: 73 GVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDIL--VNWAVQIARGMNYLHD-EAIVPI 129
Query: 395 IHCDLKPTNILLDE--------NMVAHVSDFGIYKLLGEGEDSVRQTMTMATIG---YMA 443
IH DLK +NIL+ + N + ++DFG+ + +T M+ G +MA
Sbjct: 130 IHRDLKSSNILILQKVENGDLSNKILKITDFGLAR-------EWHRTTKMSAAGAYAWMA 182
Query: 444 PEYGLEGIVSAKCDVYSYGVLLMETFTRKRP 474
PE + S DV+SYGVLL E T + P
Sbjct: 183 PEVIRASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 94/200 (47%), Gaps = 9/200 (4%)
Query: 272 DEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVF---NLQLERAFRSFDSECEVLRNVRH 327
++F +LG SF +V ++ + AIK+ ++ E E +V+ + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
+K+ ++ + + L + NG L K++ F + R ++ SALEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRF-YTAEIVSALEYLHG 150
Query: 388 GHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYG 447
IIH DLKP NILL+E+M ++DFG K+L R + T Y++PE
Sbjct: 151 KG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL 206
Query: 448 LEGIVSAKCDVYSYGVLLME 467
E S D+++ G ++ +
Sbjct: 207 TEKSASKSSDLWALGCIIYQ 226
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 101/214 (47%), Gaps = 15/214 (7%)
Query: 268 QRATDEFNECNLLGTSSFGSVYKGTISDGTDV-AIKV-FNLQLERA--FRSFDSECEVLR 323
Q A ++F LG FG+VY + A+KV F QLE+A E E+
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 324 NVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALE 383
++RH N++++ + + L+LE+ P G++ + L + F D + ++ +AL
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 122
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
Y H S +IH D+KP N+LL ++DFG S R+ T+ Y+
Sbjct: 123 YCH----SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRAALCGTLDYLP 174
Query: 444 PEYGLEG-IVSAKCDVYSYGVLLMETFTRKRPTD 476
PE +EG + K D++S GVL E K P +
Sbjct: 175 PEM-IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 98/211 (46%), Gaps = 13/211 (6%)
Query: 268 QRATDEFNECNLLGTSSFGSVYKGTISDGTDV-AIKV-FNLQLERA--FRSFDSECEVLR 323
Q A ++F LG FG+VY + + A+KV F QLE+A E E+
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 324 NVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALE 383
++RH N++++ + + L+LE+ P G++ + L + F D + ++ +AL
Sbjct: 64 HLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 122
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
Y H S +IH D+KP N+LL ++DFG S R+ T+ Y+
Sbjct: 123 YCH----SKKVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRAALCGTLDYLP 174
Query: 444 PEYGLEGIVSAKCDVYSYGVLLMETFTRKRP 474
PE + K D++S GVL E K P
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 93/198 (46%), Gaps = 7/198 (3%)
Query: 280 LGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSN 339
LG+ FG V G DVA+K+ + + F E + + + H L+K S
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIK-EGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSK 74
Query: 340 PDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDL 399
+V E++ NG L +L SH L+ + L + DV + +L S IH DL
Sbjct: 75 EYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFL----ESHQFIHRDL 130
Query: 400 KPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVY 459
N L+D ++ VSDFG+ + + + + V T + + APE S+K DV+
Sbjct: 131 AARNCLVDRDLCVKVSDFGMTRYVLD-DQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVW 189
Query: 460 SYGVLLMETFT-RKRPTD 476
++G+L+ E F+ K P D
Sbjct: 190 AFGILMWEVFSLGKMPYD 207
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 100/212 (47%), Gaps = 15/212 (7%)
Query: 268 QRATDEFNECNLLGTSSFGSVYKGTISDGTDV-AIKV-FNLQLERA--FRSFDSECEVLR 323
Q A ++F LG FG+VY + A+KV F QLE+A E E+
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 324 NVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALE 383
++RH N++++ + + L+LE+ P G++ + L + F D + ++ +AL
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 125
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
Y H S +IH D+KP N+LL ++DFG S R+ T+ Y+
Sbjct: 126 YCH----SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRAALCGTLDYLP 177
Query: 444 PEYGLEG-IVSAKCDVYSYGVLLMETFTRKRP 474
PE +EG + K D++S GVL E K P
Sbjct: 178 PEM-IEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 93/193 (48%), Gaps = 8/193 (4%)
Query: 280 LGTSSFGSVYKGTISDGT-DVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYS 338
LG +G VY+G + VA+K + F E V++ ++H NL+++L +
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 339 NPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLHNGHSSVHIIHC 397
+++EFM G+L +L N ++ + L + + SA+EYL + IH
Sbjct: 81 REPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN----FIHR 136
Query: 398 DLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCD 457
DL N L+ EN + V+DFG+ +L+ G+ I + APE S K D
Sbjct: 137 DLAARNCLVGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESLAYNKFSIKSD 195
Query: 458 VYSYGVLLMETFT 470
V+++GVLL E T
Sbjct: 196 VWAFGVLLWEIAT 208
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 9/204 (4%)
Query: 268 QRATDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVF---NLQLERAFRSFDSECEVLR 323
++ ++F +LG SF +V ++ + AIK+ ++ E E +V+
Sbjct: 6 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 65
Query: 324 NVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALE 383
+ H +K+ ++ + + L + NG L K++ F + R ++ SALE
Sbjct: 66 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALE 124
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
YLH IIH DLKP NILL+E+M ++DFG K+L R + T Y++
Sbjct: 125 YLHGKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 180
Query: 444 PEYGLEGIVSAKCDVYSYGVLLME 467
PE E D+++ G ++ +
Sbjct: 181 PELLTEKSACKSSDLWALGCIIYQ 204
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 97/201 (48%), Gaps = 17/201 (8%)
Query: 280 LGTSSFGSV----YKGTISDGTD--VAIKVFNLQLERAFRS-FDSECEVLRNVRHRNLIK 332
LG FG V Y T +DGT VA+K RS + E ++LR + H ++IK
Sbjct: 22 LGEGHFGKVSLYCYDPT-NDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIK 80
Query: 333 ILSSYSNPDFKAL--VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHS 390
+ K+L V+E++P GSL +L H+ + + + L + + YLH
Sbjct: 81 YKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICEGMAYLH---- 134
Query: 391 SVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVR-QTMTMATIGYMAPEYGLE 449
S H IH +L N+LLD + + + DFG+ K + EG + R + + + + APE E
Sbjct: 135 SQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKE 194
Query: 450 GIVSAKCDVYSYGVLLMETFT 470
DV+S+GV L E T
Sbjct: 195 YKFYYASDVWSFGVTLYELLT 215
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 9/204 (4%)
Query: 268 QRATDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVF---NLQLERAFRSFDSECEVLR 323
++ ++F +LG SF +V ++ + AIK+ ++ E E +V+
Sbjct: 5 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 64
Query: 324 NVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALE 383
+ H +K+ ++ + + L + NG L K++ F + R ++ SALE
Sbjct: 65 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALE 123
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
YLH IIH DLKP NILL+E+M ++DFG K+L R + T Y++
Sbjct: 124 YLHGKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 179
Query: 444 PEYGLEGIVSAKCDVYSYGVLLME 467
PE E D+++ G ++ +
Sbjct: 180 PELLTEKSACKSSDLWALGCIIYQ 203
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 99/213 (46%), Gaps = 13/213 (6%)
Query: 268 QRATDEFNECNLLGTSSFGSVYKGTISDGTDV-AIKV-FNLQLERA--FRSFDSECEVLR 323
Q A ++F LG FG+VY + A+KV F QLE+A E E+
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 324 NVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALE 383
++RH N++++ + + L+LE+ P G++ + L + F D + ++ +AL
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 125
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
Y H S +IH D+KP N+LL +++FG S R+T T+ Y+
Sbjct: 126 YCH----SKRVIHRDIKPENLLLGSAGELKIANFG----WSVHAPSSRRTTLCGTLDYLP 177
Query: 444 PEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTD 476
PE + K D++S GVL E K P +
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 97/204 (47%), Gaps = 11/204 (5%)
Query: 273 EFNECNLLGTSSFGSVYKGT-ISDGT----DVAIKVFNLQL-ERAFRSFDSECEVLRNVR 326
E +LG+ +FG+VYKG + +G VAIK+ N +A F E ++ ++
Sbjct: 16 ELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMD 75
Query: 327 HRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLH 386
H +L+++L +P + LV + MP+G L ++++ H + LN + + + YL
Sbjct: 76 HPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYL- 133
Query: 387 NGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEY 446
++H DL N+L+ ++DFG+ +LL E I +MA E
Sbjct: 134 ---EERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALEC 190
Query: 447 GLEGIVSAKCDVYSYGVLLMETFT 470
+ + DV+SYGV + E T
Sbjct: 191 IHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 96/202 (47%), Gaps = 17/202 (8%)
Query: 280 LGTSSFGSV----YKGTISDGTD--VAIKVFNLQLERAFRS-FDSECEVLRNVRHRNLIK 332
LG FG V Y T +DGT VA+K RS + E ++LR + H ++IK
Sbjct: 39 LGEGHFGKVSLYCYDPT-NDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIK 97
Query: 333 ILSSYSNPDFKAL--VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHS 390
+ +L V+E++P GSL +L H+ + + + L + + YLH
Sbjct: 98 YKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICEGMAYLH---- 151
Query: 391 SVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVR-QTMTMATIGYMAPEYGLE 449
+ H IH DL N+LLD + + + DFG+ K + EG + R + + + + APE E
Sbjct: 152 AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKE 211
Query: 450 GIVSAKCDVYSYGVLLMETFTR 471
DV+S+GV L E T
Sbjct: 212 YKFYYASDVWSFGVTLYELLTH 233
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 91/193 (47%), Gaps = 8/193 (4%)
Query: 280 LGTSSFGSVYKGTISDGT-DVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYS 338
LG FG VY+G + VA+K + F E V++ ++H NL+++L +
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 339 NPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLHNGHSSVHIIHC 397
++ EFM G+L +L N + + L + + SA+EYL + IH
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN----FIHR 133
Query: 398 DLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCD 457
DL N L+ EN + V+DFG+ +L+ G+ I + APE S K D
Sbjct: 134 DLAARNCLVGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESLAYNKFSIKSD 192
Query: 458 VYSYGVLLMETFT 470
V+++GVLL E T
Sbjct: 193 VWAFGVLLWEIAT 205
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 9/204 (4%)
Query: 268 QRATDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVF---NLQLERAFRSFDSECEVLR 323
++ ++F +LG SF +V ++ + AIK+ ++ E E +V+
Sbjct: 4 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 63
Query: 324 NVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALE 383
+ H +K+ ++ + + L + NG L K++ F + R ++ SALE
Sbjct: 64 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALE 122
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
YLH IIH DLKP NILL+E+M ++DFG K+L R + T Y++
Sbjct: 123 YLHGKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 178
Query: 444 PEYGLEGIVSAKCDVYSYGVLLME 467
PE E D+++ G ++ +
Sbjct: 179 PELLTEKSACKSSDLWALGCIIYQ 202
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 101/214 (47%), Gaps = 15/214 (7%)
Query: 268 QRATDEFNECNLLGTSSFGSVYKGTISDGTDV-AIKV-FNLQLERA--FRSFDSECEVLR 323
Q A ++F LG FG+VY + A+KV F QLE+A E E+
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 324 NVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALE 383
++RH N++++ + + L+LE+ P G++ + L + F D + ++ +AL
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 122
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
Y H S +IH D+KP N+LL ++DFG S R+ T+ Y+
Sbjct: 123 YCH----SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGTLDYLP 174
Query: 444 PEYGLEG-IVSAKCDVYSYGVLLMETFTRKRPTD 476
PE +EG + K D++S GVL E K P +
Sbjct: 175 PEM-IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 9/204 (4%)
Query: 268 QRATDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVF---NLQLERAFRSFDSECEVLR 323
++ ++F +LG SF +V ++ + AIK+ ++ E E +V+
Sbjct: 3 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 62
Query: 324 NVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALE 383
+ H +K+ ++ + + L + NG L K++ F + R ++ SALE
Sbjct: 63 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALE 121
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
YLH IIH DLKP NILL+E+M ++DFG K+L R + T Y++
Sbjct: 122 YLHGKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 177
Query: 444 PEYGLEGIVSAKCDVYSYGVLLME 467
PE E D+++ G ++ +
Sbjct: 178 PELLTEKSACKSSDLWALGCIIYQ 201
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 97/211 (45%), Gaps = 13/211 (6%)
Query: 268 QRATDEFNECNLLGTSSFGSVYKGTISDGTDV-AIKV-FNLQLERA--FRSFDSECEVLR 323
Q A ++F LG FG+VY + A+KV F QLE+A E E+
Sbjct: 6 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 65
Query: 324 NVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALE 383
++RH N++++ + + L+LE+ P G++ + L + F D + ++ +AL
Sbjct: 66 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 124
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
Y H S +IH D+KP N+LL ++DFG S R+ T+ Y+
Sbjct: 125 YCH----SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGTLDYLP 176
Query: 444 PEYGLEGIVSAKCDVYSYGVLLMETFTRKRP 474
PE + K D++S GVL E K P
Sbjct: 177 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 207
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 98/211 (46%), Gaps = 13/211 (6%)
Query: 268 QRATDEFNECNLLGTSSFGSVYKGTISDGTDV-AIKV-FNLQLERA--FRSFDSECEVLR 323
Q A ++F LG FG+VY + A+KV F QLE+A E E+
Sbjct: 6 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 65
Query: 324 NVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALE 383
++RH N++++ + + L+LE+ P G++ + L + F D + ++ +AL
Sbjct: 66 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 124
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
Y H S +IH D+KP N+LL +++FG S R+T T+ Y+
Sbjct: 125 YCH----SKRVIHRDIKPENLLLGSAGELKIANFG----WSVHAPSSRRTTLCGTLDYLP 176
Query: 444 PEYGLEGIVSAKCDVYSYGVLLMETFTRKRP 474
PE + K D++S GVL E K P
Sbjct: 177 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 207
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 92/193 (47%), Gaps = 8/193 (4%)
Query: 280 LGTSSFGSVYKGTISDGT-DVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYS 338
LG +G VY+G + VA+K + F E V++ ++H NL+++L +
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 339 NPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLHNGHSSVHIIHC 397
+++EFM G+L +L N + + L + + SA+EYL + IH
Sbjct: 78 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN----FIHR 133
Query: 398 DLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCD 457
DL N L+ EN + V+DFG+ +L+ G+ I + APE S K D
Sbjct: 134 DLAARNCLVGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESLAYNKFSIKSD 192
Query: 458 VYSYGVLLMETFT 470
V+++GVLL E T
Sbjct: 193 VWAFGVLLWEIAT 205
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 93/193 (48%), Gaps = 8/193 (4%)
Query: 280 LGTSSFGSVYKGTISDGT-DVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYS 338
LG +G VY+G + VA+K + F E V++ ++H NL+++L +
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 339 NPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLHNGHSSVHIIHC 397
+++EFM G+L +L N ++ + L + + SA+EYL + IH
Sbjct: 85 REPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN----FIHR 140
Query: 398 DLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCD 457
DL N L+ EN + V+DFG+ +L+ G+ I + APE S K D
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 199
Query: 458 VYSYGVLLMETFT 470
V+++GVLL E T
Sbjct: 200 VWAFGVLLWEIAT 212
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 98/213 (46%), Gaps = 13/213 (6%)
Query: 268 QRATDEFNECNLLGTSSFGSVYKGTISDGTDV-AIKV-FNLQLERA--FRSFDSECEVLR 323
Q A ++F LG FG+VY + A+KV F QLE+A E E+
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 324 NVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALE 383
++RH N++++ + + L+LE+ P G++ + L + F D + ++ +AL
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 125
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
Y H S +IH D+KP N+LL ++DFG S R+ T+ Y+
Sbjct: 126 YCH----SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGTLDYLP 177
Query: 444 PEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTD 476
PE + K D++S GVL E K P +
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 97/211 (45%), Gaps = 13/211 (6%)
Query: 268 QRATDEFNECNLLGTSSFGSVYKGTISDGTDV-AIKV-FNLQLERA--FRSFDSECEVLR 323
Q A ++F LG FG+VY + A+KV F QLE+A E E+
Sbjct: 5 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 64
Query: 324 NVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALE 383
++RH N++++ + + L+LE+ P G++ + L + F D + ++ +AL
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 123
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
Y H S +IH D+KP N+LL ++DFG S R+ T+ Y+
Sbjct: 124 YCH----SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRDTLCGTLDYLP 175
Query: 444 PEYGLEGIVSAKCDVYSYGVLLMETFTRKRP 474
PE + K D++S GVL E K P
Sbjct: 176 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 101/208 (48%), Gaps = 13/208 (6%)
Query: 280 LGTSSFGSVYKGT-ISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYS 338
+G + G+VY ++ G +VAI+ NLQ + +E V+R ++ N++ L SY
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 339 NPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCD 398
D +V+E++ GSL + +D + + + ALE+LH S +IH D
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH----SNQVIHRD 141
Query: 399 LKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDV 458
+K NILL + ++DFG + E S R TM + T +MAPE K D+
Sbjct: 142 IKSDNILLGMDGSVKLTDFGFCAQITP-EQSKRSTM-VGTPYWMAPEVVTRKAYGPKVDI 199
Query: 459 YSYGVLLMETFTRKRPTDEMFIGEMSLR 486
+S G++ +E + P ++ E LR
Sbjct: 200 WSLGIMAIEMIEGEPP----YLNENPLR 223
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 93/200 (46%), Gaps = 9/200 (4%)
Query: 272 DEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVF---NLQLERAFRSFDSECEVLRNVRH 327
++F +LG SF +V ++ + AIK+ ++ E E +V+ + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
+K+ ++ + + L + NG L K++ F + R ++ SALEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHG 150
Query: 388 GHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYG 447
IIH DLKP NILL+E+M ++DFG K+L R + T Y++PE
Sbjct: 151 KG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 448 LEGIVSAKCDVYSYGVLLME 467
E D+++ G ++ +
Sbjct: 207 TEKSAXKSSDLWALGCIIYQ 226
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 98/215 (45%), Gaps = 16/215 (7%)
Query: 265 LDIQRATDEFNECNLLGTSSFGSVYKGTISDGTD-VAIKVFNLQLERAF-----RSFDSE 318
LD++ + + + LG F +VYK + VAIK L R+ E
Sbjct: 3 LDVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALRE 62
Query: 319 CEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDV 378
++L+ + H N+I +L ++ + +LV +FM LE + ++ L M+
Sbjct: 63 IKLLQELSHPNIIGLLDAFGHKSNISLVFDFM-ETDLEVIIKDNSLVLTPSHIKAYMLMT 121
Query: 379 GSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMAT 438
LEYLH I+H DLKP N+LLDEN V ++DFG+ K G + + T
Sbjct: 122 LQGLEYLHQHW----ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV--T 175
Query: 439 IGYMAPE--YGLEGIVSAKCDVYSYGVLLMETFTR 471
Y APE +G + D+++ G +L E R
Sbjct: 176 RWYRAPELLFGAR-MYGVGVDMWAVGCILAELLLR 209
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 106/225 (47%), Gaps = 16/225 (7%)
Query: 268 QRATDEFNECNLLGTSSFGSVYKGTISDGTDV-AIKV-FNLQLERA--FRSFDSECEVLR 323
Q ++F+ LG FG+VY + A+KV F QLE+A E E+
Sbjct: 8 QWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQS 67
Query: 324 NVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALE 383
++RH N++++ + + L+LE+ P G++ + L + F D + ++ +AL
Sbjct: 68 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRF-DEQRTATYITELANALS 126
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
Y H S +IH D+KP N+LL N ++DFG S R+ T+ Y+
Sbjct: 127 YCH----SKRVIHRDIKPENLLLGSNGELKIADFG----WSVHAPSSRRDTLCGTLDYLP 178
Query: 444 PEYGLEG-IVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRR 487
PE +EG + K D++S GVL E F P E + + RR
Sbjct: 179 PEM-IEGRMHDEKVDLWSLGVLCYE-FLVGMPPFEAHTYQETYRR 221
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 123/273 (45%), Gaps = 27/273 (9%)
Query: 273 EFNECNLL---GTSSFGSVYKGTISDGTDVAIKVFNLQ--LERAFRSFDSECEVLRNVRH 327
+F + N L + G ++KG G D+ +KV ++ R R F+ EC LR H
Sbjct: 8 DFKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSH 66
Query: 328 RNLIKILSSYSNP--DFKALVLEFMPNGSLEKWLYS-HNYFLDILERLNIMIDVGSALEY 384
N++ +L + +P L+ +MP GSL L+ N+ +D + + +D+ + +
Sbjct: 67 PNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAF 126
Query: 385 LHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAP 444
LH I L ++++DE+M A +S + + + S + M ++AP
Sbjct: 127 LHTLEPL--IPRHALNSRSVMIDEDMTARIS-------MADVKFSFQSPGRMYAPAWVAP 177
Query: 445 EY---GLEGIVSAKCDVYSYGVLLMETFTRKRPTDE---MFIGEMSLRRWVKESLPHGLT 498
E E D++S+ VLL E TR+ P + M IG ++ ++P G++
Sbjct: 178 EALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGIS 237
Query: 499 EVVDANL---VREEQAFSAKMDCILSIMDFALD 528
V + + E+ A K D I+ I++ D
Sbjct: 238 PHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 97/201 (48%), Gaps = 17/201 (8%)
Query: 280 LGTSSFGSV----YKGTISDGTD--VAIKVFNLQLERAFRS-FDSECEVLRNVRHRNLIK 332
LG FG V Y T +DGT VA+K RS + E ++LR + H ++IK
Sbjct: 22 LGEGHFGKVSLYCYDPT-NDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIK 80
Query: 333 ILSSYSNPDFKAL--VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHS 390
+ K+L V+E++P GSL +L H+ + + + L + + YLH
Sbjct: 81 YKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICEGMAYLH---- 134
Query: 391 SVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVR-QTMTMATIGYMAPEYGLE 449
+ H IH +L N+LLD + + + DFG+ K + EG + R + + + + APE E
Sbjct: 135 AQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKE 194
Query: 450 GIVSAKCDVYSYGVLLMETFT 470
DV+S+GV L E T
Sbjct: 195 YKFYYASDVWSFGVTLYELLT 215
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 92/193 (47%), Gaps = 8/193 (4%)
Query: 280 LGTSSFGSVYKGTISDGT-DVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYS 338
LG +G VY+G + VA+K + F E V++ ++H NL+++L +
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 339 NPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLHNGHSSVHIIHC 397
++ EFM G+L +L N ++ + L + + SA+EYL + IH
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN----FIHR 140
Query: 398 DLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCD 457
DL N L+ EN + V+DFG+ +L+ G+ I + APE S K D
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESLAYNKFSIKSD 199
Query: 458 VYSYGVLLMETFT 470
V+++GVLL E T
Sbjct: 200 VWAFGVLLWEIAT 212
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 93/200 (46%), Gaps = 9/200 (4%)
Query: 272 DEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVF---NLQLERAFRSFDSECEVLRNVRH 327
++F +LG SF +V ++ + AIK+ ++ E E +V+ + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
+K+ ++ + + L + NG L K++ F + R ++ SALEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHG 150
Query: 388 GHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYG 447
IIH DLKP NILL+E+M ++DFG K+L R + T Y++PE
Sbjct: 151 KG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 448 LEGIVSAKCDVYSYGVLLME 467
E D+++ G ++ +
Sbjct: 207 TEKSACKSSDLWALGCIIYQ 226
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 93/200 (46%), Gaps = 9/200 (4%)
Query: 272 DEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVF---NLQLERAFRSFDSECEVLRNVRH 327
++F +LG SF +V ++ + AIK+ ++ E E +V+ + H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
+K+ ++ + + L + NG L K++ F + R ++ SALEYLH
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHG 148
Query: 388 GHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYG 447
IIH DLKP NILL+E+M ++DFG K+L R + T Y++PE
Sbjct: 149 KG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 204
Query: 448 LEGIVSAKCDVYSYGVLLME 467
E D+++ G ++ +
Sbjct: 205 TEKSACKSSDLWALGCIIYQ 224
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 93/200 (46%), Gaps = 9/200 (4%)
Query: 272 DEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVF---NLQLERAFRSFDSECEVLRNVRH 327
++F +LG SF +V ++ + AIK+ ++ E E +V+ + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
+K+ ++ + + L + NG L K++ F + R ++ SALEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHG 150
Query: 388 GHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYG 447
IIH DLKP NILL+E+M ++DFG K+L R + T Y++PE
Sbjct: 151 KG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 448 LEGIVSAKCDVYSYGVLLME 467
E D+++ G ++ +
Sbjct: 207 TEKSACKSSDLWALGCIIYQ 226
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 93/200 (46%), Gaps = 9/200 (4%)
Query: 272 DEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVF---NLQLERAFRSFDSECEVLRNVRH 327
++F +LG SF +V ++ + AIK+ ++ E E +V+ + H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
+K+ ++ + + L + NG L K++ F + R ++ SALEYLH
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHG 151
Query: 388 GHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYG 447
IIH DLKP NILL+E+M ++DFG K+L R + T Y++PE
Sbjct: 152 KG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 207
Query: 448 LEGIVSAKCDVYSYGVLLME 467
E D+++ G ++ +
Sbjct: 208 TEKSACKSSDLWALGCIIYQ 227
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 93/200 (46%), Gaps = 9/200 (4%)
Query: 272 DEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVF---NLQLERAFRSFDSECEVLRNVRH 327
++F +LG SF +V ++ + AIK+ ++ E E +V+ + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
+K+ ++ + + L + NG L K++ F + R ++ SALEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHG 150
Query: 388 GHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYG 447
IIH DLKP NILL+E+M ++DFG K+L R + T Y++PE
Sbjct: 151 KG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 448 LEGIVSAKCDVYSYGVLLME 467
E D+++ G ++ +
Sbjct: 207 TEKSACKSSDLWALGCIIYQ 226
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 93/200 (46%), Gaps = 9/200 (4%)
Query: 272 DEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVF---NLQLERAFRSFDSECEVLRNVRH 327
++F +LG SF +V ++ + AIK+ ++ E E +V+ + H
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
+K+ ++ + + L + NG L K++ F + R ++ SALEYLH
Sbjct: 95 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHG 153
Query: 388 GHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYG 447
IIH DLKP NILL+E+M ++DFG K+L R + T Y++PE
Sbjct: 154 KG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 209
Query: 448 LEGIVSAKCDVYSYGVLLME 467
E D+++ G ++ +
Sbjct: 210 TEKSACKSSDLWALGCIIYQ 229
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 93/200 (46%), Gaps = 9/200 (4%)
Query: 272 DEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVF---NLQLERAFRSFDSECEVLRNVRH 327
++F +LG SF +V ++ + AIK+ ++ E E +V+ + H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
+K+ ++ + + L + NG L K++ F + R ++ SALEYLH
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHG 148
Query: 388 GHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYG 447
IIH DLKP NILL+E+M ++DFG K+L R + T Y++PE
Sbjct: 149 KG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 204
Query: 448 LEGIVSAKCDVYSYGVLLME 467
E D+++ G ++ +
Sbjct: 205 TEKSACKSSDLWALGCIIYQ 224
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 92/193 (47%), Gaps = 8/193 (4%)
Query: 280 LGTSSFGSVYKGTISDGT-DVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYS 338
LG +G VY+G + VA+K + F E V++ ++H NL+++L +
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 339 NPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLHNGHSSVHIIHC 397
+++EFM G+L +L N + + L + + SA+EYL + IH
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN----FIHR 135
Query: 398 DLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCD 457
DL N L+ EN + V+DFG+ +L+ G+ I + APE S K D
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 194
Query: 458 VYSYGVLLMETFT 470
V+++GVLL E T
Sbjct: 195 VWAFGVLLWEIAT 207
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 93/200 (46%), Gaps = 9/200 (4%)
Query: 272 DEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVF---NLQLERAFRSFDSECEVLRNVRH 327
++F +LG SF +V ++ + AIK+ ++ E E +V+ + H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
+K+ ++ + + L + NG L K++ F + R ++ SALEYLH
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHG 148
Query: 388 GHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYG 447
IIH DLKP NILL+E+M ++DFG K+L R + T Y++PE
Sbjct: 149 KG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELL 204
Query: 448 LEGIVSAKCDVYSYGVLLME 467
E D+++ G ++ +
Sbjct: 205 TEKSACKSSDLWALGCIIYQ 224
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 100/212 (47%), Gaps = 15/212 (7%)
Query: 268 QRATDEFNECNLLGTSSFGSVYKGTISDGTDV-AIKV-FNLQLERA--FRSFDSECEVLR 323
Q A ++F LG FG+VY + A+KV F QLE+A E E+
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 324 NVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALE 383
++RH N++++ + + L+LE+ P G++ + L + F D + ++ +AL
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 125
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
Y H S +IH D+KP N+LL ++DFG S R+ T+ Y+
Sbjct: 126 YCH----SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRDDLCGTLDYLP 177
Query: 444 PEYGLEG-IVSAKCDVYSYGVLLMETFTRKRP 474
PE +EG + K D++S GVL E K P
Sbjct: 178 PEM-IEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 93/200 (46%), Gaps = 9/200 (4%)
Query: 272 DEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVF---NLQLERAFRSFDSECEVLRNVRH 327
++F +LG SF +V ++ + AIK+ ++ E E +V+ + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
+K+ ++ + + L + NG L K++ F + R ++ SALEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHG 150
Query: 388 GHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYG 447
IIH DLKP NILL+E+M ++DFG K+L R + T Y++PE
Sbjct: 151 KG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 448 LEGIVSAKCDVYSYGVLLME 467
E D+++ G ++ +
Sbjct: 207 TEKSACKSSDLWALGCIIYQ 226
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 93/200 (46%), Gaps = 9/200 (4%)
Query: 272 DEFNECNLLGTSSFGS-VYKGTISDGTDVAIKVF---NLQLERAFRSFDSECEVLRNVRH 327
++F +LG SF + V ++ + AIK+ ++ E E +V+ + H
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
+K+ ++ + + L + NG L K++ F + R ++ SALEYLH
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHG 148
Query: 388 GHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYG 447
IIH DLKP NILL+E+M ++DFG K+L R + T Y++PE
Sbjct: 149 KG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 204
Query: 448 LEGIVSAKCDVYSYGVLLME 467
E D+++ G ++ +
Sbjct: 205 TEKSACKSSDLWALGCIIYQ 224
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 92/193 (47%), Gaps = 8/193 (4%)
Query: 280 LGTSSFGSVYKGTISDGT-DVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYS 338
LG +G VY+G + VA+K + F E V++ ++H NL+++L +
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 339 NPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLHNGHSSVHIIHC 397
+++EFM G+L +L N + + L + + SA+EYL + IH
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN----FIHR 135
Query: 398 DLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCD 457
DL N L+ EN + V+DFG+ +L+ G+ I + APE S K D
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 194
Query: 458 VYSYGVLLMETFT 470
V+++GVLL E T
Sbjct: 195 VWAFGVLLWEIAT 207
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 92/193 (47%), Gaps = 8/193 (4%)
Query: 280 LGTSSFGSVYKGTISDGT-DVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYS 338
LG +G VY+G + VA+K + F E V++ ++H NL+++L +
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 339 NPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLHNGHSSVHIIHC 397
++ EFM G+L +L N ++ + L + + SA+EYL + IH
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN----FIHR 140
Query: 398 DLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCD 457
DL N L+ EN + V+DFG+ +L+ G+ I + APE S K D
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 199
Query: 458 VYSYGVLLMETFT 470
V+++GVLL E T
Sbjct: 200 VWAFGVLLWEIAT 212
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 93/200 (46%), Gaps = 9/200 (4%)
Query: 272 DEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVF---NLQLERAFRSFDSECEVLRNVRH 327
++F +LG SF +V ++ + AIK+ ++ E E +V+ + H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
+K+ ++ + + L + NG L K++ F + R ++ SALEYLH
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHG 151
Query: 388 GHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYG 447
IIH DLKP NILL+E+M ++DFG K+L R + T Y++PE
Sbjct: 152 KG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL 207
Query: 448 LEGIVSAKCDVYSYGVLLME 467
E D+++ G ++ +
Sbjct: 208 TEKSACKSSDLWALGCIIYQ 227
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 92/193 (47%), Gaps = 8/193 (4%)
Query: 280 LGTSSFGSVYKGTISDGT-DVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYS 338
LG +G VY+G + VA+K + F E V++ ++H NL+++L +
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 83
Query: 339 NPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLHNGHSSVHIIHC 397
++ EFM G+L +L N ++ + L + + SA+EYL + IH
Sbjct: 84 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN----FIHR 139
Query: 398 DLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCD 457
DL N L+ EN + V+DFG+ +L+ G+ I + APE S K D
Sbjct: 140 DLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 198
Query: 458 VYSYGVLLMETFT 470
V+++GVLL E T
Sbjct: 199 VWAFGVLLWEIAT 211
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 97/213 (45%), Gaps = 20/213 (9%)
Query: 273 EFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLER-----AFRSFDSECEVLRNVRH 327
FNE ++G FG VY GT+ D I L R F +E ++++ H
Sbjct: 32 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 89
Query: 328 RNLIKILS----SYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALE 383
N++ +L S +P +VL +M +G L ++ + + + + + + V ++
Sbjct: 90 PNVLSLLGICLRSEGSP---LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMK 146
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMAT--IGY 441
YL +S +H DL N +LDE V+DFG+ + + + E T A + +
Sbjct: 147 YL----ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKW 202
Query: 442 MAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRP 474
MA E + K DV+S+GVLL E TR P
Sbjct: 203 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 93/200 (46%), Gaps = 9/200 (4%)
Query: 272 DEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVF---NLQLERAFRSFDSECEVLRNVRH 327
++F +LG SF +V ++ + AIK+ ++ E E +V+ + H
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
+K+ ++ + + L + NG L K++ F + R ++ SALEYLH
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHG 132
Query: 388 GHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYG 447
IIH DLKP NILL+E+M ++DFG K+L R + T Y++PE
Sbjct: 133 KG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 188
Query: 448 LEGIVSAKCDVYSYGVLLME 467
E D+++ G ++ +
Sbjct: 189 TEKSACKSSDLWALGCIIYQ 208
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 100/212 (47%), Gaps = 15/212 (7%)
Query: 268 QRATDEFNECNLLGTSSFGSVYKGTISDGTDV-AIKV-FNLQLERA--FRSFDSECEVLR 323
Q A ++F LG FG+VY + A+KV F QLE+A E E+
Sbjct: 30 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 89
Query: 324 NVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALE 383
++RH N++++ + + L+LE+ P G++ + L + F D + ++ +AL
Sbjct: 90 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 148
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
Y H S +IH D+KP N+LL ++DFG S R+ T+ Y+
Sbjct: 149 YCH----SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRDDLCGTLDYLP 200
Query: 444 PEYGLEG-IVSAKCDVYSYGVLLMETFTRKRP 474
PE +EG + K D++S GVL E K P
Sbjct: 201 PEM-IEGRMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 92/193 (47%), Gaps = 8/193 (4%)
Query: 280 LGTSSFGSVYKGTISDGT-DVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYS 338
LG +G VY+G + VA+K + F E V++ ++H NL+++L +
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 339 NPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLHNGHSSVHIIHC 397
++ EFM G+L +L N ++ + L + + SA+EYL + IH
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN----FIHR 135
Query: 398 DLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCD 457
DL N L+ EN + V+DFG+ +L+ G+ I + APE S K D
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 194
Query: 458 VYSYGVLLMETFT 470
V+++GVLL E T
Sbjct: 195 VWAFGVLLWEIAT 207
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 126/322 (39%), Gaps = 69/322 (21%)
Query: 273 EFNECNL-----LGTSSFGSVYKGTI------SDGTDVAIKVFNLQLERA-FRSFDSECE 320
EF NL LG FG V K T + T VA+K+ + R SE
Sbjct: 19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFN 78
Query: 321 VLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWL--------------------- 359
VL+ V H ++IK+ + S L++E+ GSL +L
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 360 --YSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDF 417
+ L + + ++ + ++YL + + ++H DL NIL+ E +SDF
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYL----AEMKLVHRDLAARNILVAEGRKMKISDF 194
Query: 418 GIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKR---- 473
G+ + + E + V+++ + +MA E + I + + DV+S+GVLL E T
Sbjct: 195 GLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYP 254
Query: 474 --PTDEMFIGEMSLRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDFALDCCM 531
P + +F NL++ +C + L C
Sbjct: 255 GIPPERLF------------------------NLLKTGHRMERPDNCSEEMYRLMLQCWK 290
Query: 532 ESPDMRINMTDAAAKLKKIKVK 553
+ PD R D + L+K+ VK
Sbjct: 291 QEPDKRPVFADISKDLEKMMVK 312
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 100/213 (46%), Gaps = 20/213 (9%)
Query: 273 EFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLER-----AFRSFDSECEVLRNVRH 327
FNE ++G FG VY GT+ D I L R F +E ++++ H
Sbjct: 38 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 95
Query: 328 RNLIKILS----SYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALE 383
N++ +L S +P +VL +M +G L ++ + + + + + + V ++
Sbjct: 96 PNVLSLLGICLRSEGSP---LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMK 152
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGE-DSVR-QTMTMATIGY 441
+L +S +H DL N +LDE V+DFG+ + + + E DSV +T + +
Sbjct: 153 FL----ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 208
Query: 442 MAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRP 474
MA E + K DV+S+GVLL E TR P
Sbjct: 209 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 241
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 100/213 (46%), Gaps = 20/213 (9%)
Query: 273 EFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLER-----AFRSFDSECEVLRNVRH 327
FNE ++G FG VY GT+ D I L R F +E ++++ H
Sbjct: 92 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 149
Query: 328 RNLIKILS----SYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALE 383
N++ +L S +P +VL +M +G L ++ + + + + + + V ++
Sbjct: 150 PNVLSLLGICLRSEGSP---LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMK 206
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGE-DSVR-QTMTMATIGY 441
+L +S +H DL N +LDE V+DFG+ + + + E DSV +T + +
Sbjct: 207 FL----ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 262
Query: 442 MAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRP 474
MA E + K DV+S+GVLL E TR P
Sbjct: 263 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 295
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 92/193 (47%), Gaps = 8/193 (4%)
Query: 280 LGTSSFGSVYKGTISDGT-DVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYS 338
LG +G VY+G + VA+K + F E V++ ++H NL+++L +
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 339 NPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLHNGHSSVHIIHC 397
++ EFM G+L +L N ++ + L + + SA+EYL + IH
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN----FIHR 140
Query: 398 DLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCD 457
DL N L+ EN + V+DFG+ +L+ G+ I + APE S K D
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 199
Query: 458 VYSYGVLLMETFT 470
V+++GVLL E T
Sbjct: 200 VWAFGVLLWEIAT 212
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 100/213 (46%), Gaps = 20/213 (9%)
Query: 273 EFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLER-----AFRSFDSECEVLRNVRH 327
FNE ++G FG VY GT+ D I L R F +E ++++ H
Sbjct: 31 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 88
Query: 328 RNLIKILS----SYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALE 383
N++ +L S +P +VL +M +G L ++ + + + + + + V ++
Sbjct: 89 PNVLSLLGICLRSEGSP---LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMK 145
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGE-DSVR-QTMTMATIGY 441
+L +S +H DL N +LDE V+DFG+ + + + E DSV +T + +
Sbjct: 146 FL----ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 201
Query: 442 MAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRP 474
MA E + K DV+S+GVLL E TR P
Sbjct: 202 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 92/193 (47%), Gaps = 8/193 (4%)
Query: 280 LGTSSFGSVYKGTISDGT-DVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYS 338
LG +G VY+G + VA+K + F E V++ ++H NL+++L +
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 339 NPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLHNGHSSVHIIHC 397
++ EFM G+L +L N ++ + L + + SA+EYL + IH
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN----FIHR 137
Query: 398 DLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCD 457
DL N L+ EN + V+DFG+ +L+ G+ I + APE S K D
Sbjct: 138 DLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 196
Query: 458 VYSYGVLLMETFT 470
V+++GVLL E T
Sbjct: 197 VWAFGVLLWEIAT 209
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 92/193 (47%), Gaps = 8/193 (4%)
Query: 280 LGTSSFGSVYKGTISDGT-DVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYS 338
LG +G VY+G + VA+K + F E V++ ++H NL+++L +
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 339 NPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLHNGHSSVHIIHC 397
++ EFM G+L +L N ++ + L + + SA+EYL + IH
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN----FIHR 135
Query: 398 DLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCD 457
DL N L+ EN + V+DFG+ +L+ G+ I + APE S K D
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 194
Query: 458 VYSYGVLLMETFT 470
V+++GVLL E T
Sbjct: 195 VWAFGVLLWEIAT 207
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 93/200 (46%), Gaps = 9/200 (4%)
Query: 272 DEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVF---NLQLERAFRSFDSECEVLRNVRH 327
++F +LG SF +V ++ + AIK+ ++ E E +V+ + H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
+K+ ++ + + L + NG L K++ F + R ++ SALEYLH
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHG 147
Query: 388 GHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYG 447
IIH DLKP NILL+E+M ++DFG K+L R + T Y++PE
Sbjct: 148 KG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 203
Query: 448 LEGIVSAKCDVYSYGVLLME 467
E D+++ G ++ +
Sbjct: 204 TEKSACKSSDLWALGCIIYQ 223
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 126/322 (39%), Gaps = 69/322 (21%)
Query: 273 EFNECNL-----LGTSSFGSVYKGTI------SDGTDVAIKVFNLQLERA-FRSFDSECE 320
EF NL LG FG V K T + T VA+K+ + R SE
Sbjct: 19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFN 78
Query: 321 VLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWL--------------------- 359
VL+ V H ++IK+ + S L++E+ GSL +L
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 360 --YSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDF 417
+ L + + ++ + ++YL + + ++H DL NIL+ E +SDF
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYL----AEMSLVHRDLAARNILVAEGRKMKISDF 194
Query: 418 GIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKR---- 473
G+ + + E + V+++ + +MA E + I + + DV+S+GVLL E T
Sbjct: 195 GLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYP 254
Query: 474 --PTDEMFIGEMSLRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDFALDCCM 531
P + +F NL++ +C + L C
Sbjct: 255 GIPPERLF------------------------NLLKTGHRMERPDNCSEEMYRLMLQCWK 290
Query: 532 ESPDMRINMTDAAAKLKKIKVK 553
+ PD R D + L+K+ VK
Sbjct: 291 QEPDKRPVFADISKDLEKMMVK 312
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 100/213 (46%), Gaps = 20/213 (9%)
Query: 273 EFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLER-----AFRSFDSECEVLRNVRH 327
FNE ++G FG VY GT+ D I L R F +E ++++ H
Sbjct: 33 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 90
Query: 328 RNLIKILS----SYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALE 383
N++ +L S +P +VL +M +G L ++ + + + + + + V ++
Sbjct: 91 PNVLSLLGICLRSEGSP---LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMK 147
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGE-DSVR-QTMTMATIGY 441
+L +S +H DL N +LDE V+DFG+ + + + E DSV +T + +
Sbjct: 148 FL----ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 203
Query: 442 MAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRP 474
MA E + K DV+S+GVLL E TR P
Sbjct: 204 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 100/213 (46%), Gaps = 20/213 (9%)
Query: 273 EFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLER-----AFRSFDSECEVLRNVRH 327
FNE ++G FG VY GT+ D I L R F +E ++++ H
Sbjct: 33 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 90
Query: 328 RNLIKILS----SYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALE 383
N++ +L S +P +VL +M +G L ++ + + + + + + V ++
Sbjct: 91 PNVLSLLGICLRSEGSP---LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMK 147
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGE-DSVR-QTMTMATIGY 441
+L +S +H DL N +LDE V+DFG+ + + + E DSV +T + +
Sbjct: 148 FL----ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 203
Query: 442 MAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRP 474
MA E + K DV+S+GVLL E TR P
Sbjct: 204 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 92/193 (47%), Gaps = 8/193 (4%)
Query: 280 LGTSSFGSVYKGTISDGT-DVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYS 338
LG +G VY+G + VA+K + F E V++ ++H NL+++L +
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 339 NPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLHNGHSSVHIIHC 397
++ EFM G+L +L N ++ + L + + SA+EYL + IH
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN----FIHR 137
Query: 398 DLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCD 457
DL N L+ EN + V+DFG+ +L+ G+ I + APE S K D
Sbjct: 138 DLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 196
Query: 458 VYSYGVLLMETFT 470
V+++GVLL E T
Sbjct: 197 VWAFGVLLWEIAT 209
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 92/193 (47%), Gaps = 8/193 (4%)
Query: 280 LGTSSFGSVYKGTISDGT-DVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYS 338
LG +G VY+G + VA+K + F E V++ ++H NL+++L +
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 92
Query: 339 NPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLHNGHSSVHIIHC 397
++ EFM G+L +L N ++ + L + + SA+EYL + IH
Sbjct: 93 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN----FIHR 148
Query: 398 DLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCD 457
DL N L+ EN + V+DFG+ +L+ G+ I + APE S K D
Sbjct: 149 DLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 207
Query: 458 VYSYGVLLMETFT 470
V+++GVLL E T
Sbjct: 208 VWAFGVLLWEIAT 220
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 100/213 (46%), Gaps = 20/213 (9%)
Query: 273 EFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLER-----AFRSFDSECEVLRNVRH 327
FNE ++G FG VY GT+ D I L R F +E ++++ H
Sbjct: 34 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 91
Query: 328 RNLIKILS----SYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALE 383
N++ +L S +P +VL +M +G L ++ + + + + + + V ++
Sbjct: 92 PNVLSLLGICLRSEGSP---LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMK 148
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGE-DSVR-QTMTMATIGY 441
+L +S +H DL N +LDE V+DFG+ + + + E DSV +T + +
Sbjct: 149 FL----ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 204
Query: 442 MAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRP 474
MA E + K DV+S+GVLL E TR P
Sbjct: 205 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 93/194 (47%), Gaps = 16/194 (8%)
Query: 280 LGTSSFGSVY-KGTISDGTDVAIKVFNLQLERA-FRSFDSECEVLRNVRHRNLIKILSSY 337
LG+ +FG V+ S G + IK N + ++E EVL+++ H N+IKI +
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF 89
Query: 338 SNPDFKALVLEFMPNGSLEKWLYSHNYFLDILER---LNIMIDVGSALEYLHNGHSSVHI 394
+ +V+E G L + + S L +M + +AL Y H S H+
Sbjct: 90 EDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH----SQHV 145
Query: 395 IHCDLKPTNILLDE---NMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGI 451
+H DLKP NIL + + + DFG+ +L E S T T YMAPE +
Sbjct: 146 VHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHS---TNAAGTALYMAPEV-FKRD 201
Query: 452 VSAKCDVYSYGVLL 465
V+ KCD++S GV++
Sbjct: 202 VTFKCDIWSAGVVM 215
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 100/213 (46%), Gaps = 20/213 (9%)
Query: 273 EFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLER-----AFRSFDSECEVLRNVRH 327
FNE ++G FG VY GT+ D I L R F +E ++++ H
Sbjct: 34 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 91
Query: 328 RNLIKILS----SYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALE 383
N++ +L S +P +VL +M +G L ++ + + + + + + V ++
Sbjct: 92 PNVLSLLGICLRSEGSP---LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMK 148
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYK-LLGEGEDSVR-QTMTMATIGY 441
+L +S +H DL N +LDE V+DFG+ + +L + DSV +T + +
Sbjct: 149 FL----ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKW 204
Query: 442 MAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRP 474
MA E + K DV+S+GVLL E TR P
Sbjct: 205 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 126/322 (39%), Gaps = 69/322 (21%)
Query: 273 EFNECNL-----LGTSSFGSVYKGTI------SDGTDVAIKVFNLQLERA-FRSFDSECE 320
EF NL LG FG V K T + T VA+K+ + R SE
Sbjct: 19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFN 78
Query: 321 VLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWL--------------------- 359
VL+ V H ++IK+ + S L++E+ GSL +L
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 360 --YSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDF 417
+ L + + ++ + ++YL + + ++H DL NIL+ E +SDF
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYL----AEMKLVHRDLAARNILVAEGRKMKISDF 194
Query: 418 GIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKR---- 473
G+ + + E + V+++ + +MA E + I + + DV+S+GVLL E T
Sbjct: 195 GLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYP 254
Query: 474 --PTDEMFIGEMSLRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDFALDCCM 531
P + +F NL++ +C + L C
Sbjct: 255 GIPPERLF------------------------NLLKTGHRMERPDNCSEEMYRLMLQCWK 290
Query: 532 ESPDMRINMTDAAAKLKKIKVK 553
+ PD R D + L+K+ VK
Sbjct: 291 QEPDKRPVFADISKDLEKMMVK 312
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 92/193 (47%), Gaps = 8/193 (4%)
Query: 280 LGTSSFGSVYKGTISDGT-DVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYS 338
LG +G VY+G + VA+K + F E V++ ++H NL+++L +
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 339 NPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLHNGHSSVHIIHC 397
++ EFM G+L +L N ++ + L + + SA+EYL + IH
Sbjct: 81 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN----FIHR 136
Query: 398 DLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCD 457
DL N L+ EN + V+DFG+ +L+ G+ I + APE S K D
Sbjct: 137 DLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAPAGAKFPIKWTAPESLAYNKFSIKSD 195
Query: 458 VYSYGVLLMETFT 470
V+++GVLL E T
Sbjct: 196 VWAFGVLLWEIAT 208
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 92/193 (47%), Gaps = 8/193 (4%)
Query: 280 LGTSSFGSVYKGTISDGT-DVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYS 338
LG +G VY+G + VA+K + F E V++ ++H NL+++L +
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 339 NPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLHNGHSSVHIIHC 397
++ EFM G+L +L N ++ + L + + SA+EYL + IH
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN----FIHR 137
Query: 398 DLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCD 457
DL N L+ EN + V+DFG+ +L+ G+ I + APE S K D
Sbjct: 138 DLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAPAGAKFPIKWTAPESLAYNKFSIKSD 196
Query: 458 VYSYGVLLMETFT 470
V+++GVLL E T
Sbjct: 197 VWAFGVLLWEIAT 209
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 92/200 (46%), Gaps = 9/200 (4%)
Query: 272 DEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVF---NLQLERAFRSFDSECEVLRNVRH 327
++F +LG SF +V ++ + AIK+ ++ E E +V+ + H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
+K+ + + + L + NG L K++ F + R ++ SALEYLH
Sbjct: 97 PFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHG 155
Query: 388 GHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYG 447
IIH DLKP NILL+E+M ++DFG K+L R + T Y++PE
Sbjct: 156 KG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 211
Query: 448 LEGIVSAKCDVYSYGVLLME 467
E D+++ G ++ +
Sbjct: 212 TEKSACKSSDLWALGCIIYQ 231
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 93/200 (46%), Gaps = 9/200 (4%)
Query: 272 DEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVF---NLQLERAFRSFDSECEVLRNVRH 327
++F +LG SF +V ++ + AIK+ ++ E E +V+ + H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
+K+ ++ + + L + NG L K++ F + R ++ SALEYLH
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHG 147
Query: 388 GHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYG 447
IIH DLKP NILL+E+M ++DFG K+L R + T Y++PE
Sbjct: 148 KG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL 203
Query: 448 LEGIVSAKCDVYSYGVLLME 467
E D+++ G ++ +
Sbjct: 204 TEKSACKSSDLWALGCIIYQ 223
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 91/193 (47%), Gaps = 8/193 (4%)
Query: 280 LGTSSFGSVYKGTISDGT-DVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYS 338
LG +G VY+G + VA+K + F E V++ ++H NL+++L +
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 339 NPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLHNGHSSVHIIHC 397
++ EFM G+L +L N + + L + + SA+EYL + IH
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN----FIHR 140
Query: 398 DLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCD 457
DL N L+ EN + V+DFG+ +L+ G+ I + APE S K D
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 199
Query: 458 VYSYGVLLMETFT 470
V+++GVLL E T
Sbjct: 200 VWAFGVLLWEIAT 212
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 91/193 (47%), Gaps = 8/193 (4%)
Query: 280 LGTSSFGSVYKGTISDGT-DVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYS 338
LG +G VY+G + VA+K + F E V++ ++H NL+++L +
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 339 NPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLHNGHSSVHIIHC 397
++ EFM G+L +L N + + L + + SA+EYL + IH
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN----FIHR 135
Query: 398 DLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCD 457
DL N L+ EN + V+DFG+ +L+ G+ I + APE S K D
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 194
Query: 458 VYSYGVLLMETFT 470
V+++GVLL E T
Sbjct: 195 VWAFGVLLWEIAT 207
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 97/215 (45%), Gaps = 18/215 (8%)
Query: 271 TDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLERA---FRSFDSECEVLRNVR 326
+D + +LG V+ + D DVA+KV L R + F E + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 327 HRNLIKI-----LSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSA 381
H ++ + + + P +V+E++ +L +++ + + ++ D A
Sbjct: 71 HPAIVAVYDTGEAETPAGP-LPYIVMEYVDGVTLRDIVHTEGP-MTPKRAIEVIADACQA 128
Query: 382 LEYLH-NGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMT-MATI 439
L + H NG IIH D+KP NIL+ V DFGI + + + +SV QT + T
Sbjct: 129 LNFSHQNG-----IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTA 183
Query: 440 GYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRP 474
Y++PE V A+ DVYS G +L E T + P
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 91/193 (47%), Gaps = 8/193 (4%)
Query: 280 LGTSSFGSVYKGTISDGT-DVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYS 338
LG +G VY+G + VA+K + F E V++ ++H NL+++L +
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 339 NPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLHNGHSSVHIIHC 397
++ EFM G+L +L N + + L + + SA+EYL + IH
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN----FIHR 135
Query: 398 DLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCD 457
DL N L+ EN + V+DFG+ +L+ G+ I + APE S K D
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 194
Query: 458 VYSYGVLLMETFT 470
V+++GVLL E T
Sbjct: 195 VWAFGVLLWEIAT 207
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 91/193 (47%), Gaps = 8/193 (4%)
Query: 280 LGTSSFGSVYKGTISDGT-DVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYS 338
LG +G VY+G + VA+K + F E V++ ++H NL+++L +
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 339 NPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLHNGHSSVHIIHC 397
++ EFM G+L +L N + + L + + SA+EYL + IH
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN----FIHR 133
Query: 398 DLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCD 457
DL N L+ EN + V+DFG+ +L+ G+ I + APE S K D
Sbjct: 134 DLAARNCLVGENHLVKVADFGLSRLMT-GDTFTAHAGAKFPIKWTAPESLAYNKFSIKSD 192
Query: 458 VYSYGVLLMETFT 470
V+++GVLL E T
Sbjct: 193 VWAFGVLLWEIAT 205
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 103/220 (46%), Gaps = 26/220 (11%)
Query: 272 DEFNECNLLGTSSFGSVYKGTISDGTD-------VAIKVFNLQLERA-FRSFDSECEVLR 323
D N LG +FG V + + G D VA+K+ + R+ SE ++L
Sbjct: 27 DRLNLGKPLGRGAFGQVIEAD-AFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILI 85
Query: 324 NVRHR-NLIKILSSYSNPDFKALVL-EFMPNGSLEKWLYS-----------HNYFLDILE 370
++ H N++ +L + + P +V+ EF G+L +L S + FL +
Sbjct: 86 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEH 145
Query: 371 RLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSV 430
+ V +E+L +S IH DL NILL E V + DFG+ + + + D V
Sbjct: 146 LIXYSFQVAKGMEFL----ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYV 201
Query: 431 RQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
R+ + +MAPE + + + + DV+S+GVLL E F+
Sbjct: 202 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 97/213 (45%), Gaps = 20/213 (9%)
Query: 273 EFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLER-----AFRSFDSECEVLRNVRH 327
FNE ++G FG VY GT+ D I L R F +E ++++ H
Sbjct: 25 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 82
Query: 328 RNLIKILS----SYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALE 383
N++ +L S +P +VL +M +G L ++ + + + + + + V ++
Sbjct: 83 PNVLSLLGICLRSEGSP---LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMK 139
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMAT--IGY 441
YL +S +H DL N +LDE V+DFG+ + + + E T A + +
Sbjct: 140 YL----ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 195
Query: 442 MAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRP 474
MA E + K DV+S+GVLL E TR P
Sbjct: 196 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 228
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 13/208 (6%)
Query: 280 LGTSSFGSVYKGT-ISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYS 338
+G + G+VY ++ G +VAI+ NLQ + +E V+R ++ N++ L SY
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 339 NPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCD 398
D +V+E++ GSL + +D + + + ALE+LH S +IH D
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH----SNQVIHRD 141
Query: 399 LKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDV 458
+K NILL + ++DFG + E S R M + T +MAPE K D+
Sbjct: 142 IKSDNILLGMDGSVKLTDFGFCAQITP-EQSKRSXM-VGTPYWMAPEVVTRKAYGPKVDI 199
Query: 459 YSYGVLLMETFTRKRPTDEMFIGEMSLR 486
+S G++ +E + P ++ E LR
Sbjct: 200 WSLGIMAIEMIEGEPP----YLNENPLR 223
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 101/208 (48%), Gaps = 13/208 (6%)
Query: 280 LGTSSFGSVYKGT-ISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYS 338
+G + G+VY ++ G +VAI+ NLQ + +E V+R ++ N++ L SY
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 339 NPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCD 398
D +V+E++ GSL + +D + + + ALE+LH S +IH +
Sbjct: 89 VGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH----SNQVIHRN 142
Query: 399 LKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDV 458
+K NILL + ++DFG + E S R TM + T +MAPE K D+
Sbjct: 143 IKSDNILLGMDGSVKLTDFGFCAQITP-EQSKRSTM-VGTPYWMAPEVVTRKAYGPKVDI 200
Query: 459 YSYGVLLMETFTRKRPTDEMFIGEMSLR 486
+S G++ +E + P ++ E LR
Sbjct: 201 WSLGIMAIEMIEGEPP----YLNENPLR 224
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 95/199 (47%), Gaps = 38/199 (19%)
Query: 288 VYKGTISDGTDVAIKVFNL--------QLERAFRSFDSECEVLRNVR-HRNLIKILSSYS 338
V++ T G + A+K+ + QLE + E +LR V H ++I ++ SY
Sbjct: 114 VHRAT---GHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYE 170
Query: 339 NPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCD 398
+ F LV + M G L +L + L E +IM + A+ +LH + I+H D
Sbjct: 171 SSSFMFLVFDLMRKGELFDYL-TEKVALSEKETRSIMRSLLEAVSFLHANN----IVHRD 225
Query: 399 LKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPE------------Y 446
LKP NILLD+NM +SDFG L GE +R+ T GY+APE Y
Sbjct: 226 LKPENILLDDNMQIRLSDFGFSCHLEPGE-KLRE--LCGTPGYLAPEILKCSMDETHPGY 282
Query: 447 GLEGIVSAKCDVYSYGVLL 465
G E D+++ GV+L
Sbjct: 283 GKE------VDLWACGVIL 295
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 103/214 (48%), Gaps = 10/214 (4%)
Query: 267 IQRATDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQ-LERA--FRSFDSECEVL 322
I ++F NLLG SF VY+ +I G +VAIK+ + + + +A + +E ++
Sbjct: 6 IGEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIH 65
Query: 323 RNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSAL 382
++H +++++ + + + ++ LVLE NG + ++L + E + M + + +
Sbjct: 66 CQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGM 125
Query: 383 EYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYM 442
YLH S I+H DL +N+LL NM ++DFG+ L + + T Y+
Sbjct: 126 LYLH----SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHE--KHYTLCGTPNYI 179
Query: 443 APEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTD 476
+PE + DV+S G + + P D
Sbjct: 180 SPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFD 213
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 13/208 (6%)
Query: 280 LGTSSFGSVYKGT-ISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYS 338
+G + G+VY ++ G +VAI+ NLQ + +E V+R ++ N++ L SY
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 339 NPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCD 398
D +V+E++ GSL + +D + + + ALE+LH S +IH D
Sbjct: 89 VGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH----SNQVIHRD 142
Query: 399 LKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDV 458
+K NILL + ++DFG + E S R M + T +MAPE K D+
Sbjct: 143 IKSDNILLGMDGSVKLTDFGFCAQITP-EQSKRSXM-VGTPYWMAPEVVTRKAYGPKVDI 200
Query: 459 YSYGVLLMETFTRKRPTDEMFIGEMSLR 486
+S G++ +E + P ++ E LR
Sbjct: 201 WSLGIMAIEMIEGEPP----YLNENPLR 224
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 97/213 (45%), Gaps = 20/213 (9%)
Query: 273 EFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLER-----AFRSFDSECEVLRNVRH 327
FNE ++G FG VY GT+ D I L R F +E ++++ H
Sbjct: 52 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 109
Query: 328 RNLIKILS----SYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALE 383
N++ +L S +P +VL +M +G L ++ + + + + + + V ++
Sbjct: 110 PNVLSLLGICLRSEGSP---LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMK 166
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMAT--IGY 441
YL +S +H DL N +LDE V+DFG+ + + + E T A + +
Sbjct: 167 YL----ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 222
Query: 442 MAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRP 474
MA E + K DV+S+GVLL E TR P
Sbjct: 223 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 255
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 97/213 (45%), Gaps = 20/213 (9%)
Query: 273 EFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLER-----AFRSFDSECEVLRNVRH 327
FNE ++G FG VY GT+ D I L R F +E ++++ H
Sbjct: 33 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 90
Query: 328 RNLIKILS----SYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALE 383
N++ +L S +P +VL +M +G L ++ + + + + + + V ++
Sbjct: 91 PNVLSLLGICLRSEGSP---LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMK 147
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMAT--IGY 441
YL +S +H DL N +LDE V+DFG+ + + + E T A + +
Sbjct: 148 YL----ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 203
Query: 442 MAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRP 474
MA E + K DV+S+GVLL E TR P
Sbjct: 204 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 97/213 (45%), Gaps = 20/213 (9%)
Query: 273 EFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLER-----AFRSFDSECEVLRNVRH 327
FNE ++G FG VY GT+ D I L R F +E ++++ H
Sbjct: 51 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 108
Query: 328 RNLIKILS----SYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALE 383
N++ +L S +P +VL +M +G L ++ + + + + + + V ++
Sbjct: 109 PNVLSLLGICLRSEGSP---LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMK 165
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMAT--IGY 441
YL +S +H DL N +LDE V+DFG+ + + + E T A + +
Sbjct: 166 YL----ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 221
Query: 442 MAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRP 474
MA E + K DV+S+GVLL E TR P
Sbjct: 222 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 254
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
Query: 278 NLLGTSSFGSVYKGTISDGTDVAIKVFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSS 336
+LG FG K T + +V + ++ E R+F E +V+R + H N++K +
Sbjct: 16 EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGV 75
Query: 337 YSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIH 396
+ E++ G+L + S + +R++ D+ S + YLH S++IIH
Sbjct: 76 LYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH----SMNIIH 131
Query: 397 CDLKPTNILLDENMVAHVSDFGIYKLL------GEG------EDSVRQTMTMATIGYMAP 444
DL N L+ EN V+DFG+ +L+ EG D ++ + +MAP
Sbjct: 132 RDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAP 191
Query: 445 EYGLEGIVSAKCDVYSYGVLLMETFTR 471
E K DV+S+G++L E R
Sbjct: 192 EMINGRSYDEKVDVFSFGIVLCEIIGR 218
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 13/208 (6%)
Query: 280 LGTSSFGSVYKGT-ISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYS 338
+G + G+VY ++ G +VAI+ NLQ + +E V+R ++ N++ L SY
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 339 NPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCD 398
D +V+E++ GSL + +D + + + ALE+LH S +IH D
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH----SNQVIHRD 141
Query: 399 LKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDV 458
+K NILL + ++DFG + E S R M + T +MAPE K D+
Sbjct: 142 IKSDNILLGMDGSVKLTDFGFCAQITP-EQSKRSEM-VGTPYWMAPEVVTRKAYGPKVDI 199
Query: 459 YSYGVLLMETFTRKRPTDEMFIGEMSLR 486
+S G++ +E + P ++ E LR
Sbjct: 200 WSLGIMAIEMIEGEPP----YLNENPLR 223
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 95/201 (47%), Gaps = 17/201 (8%)
Query: 280 LGTSSFGSV----YKGTISDGTD--VAIKVFNLQLERAFRS-FDSECEVLRNVRHRNLIK 332
LG FG V Y T +DGT VA+K RS + E E+LR + H +++K
Sbjct: 16 LGEGHFGKVSLYCYDPT-NDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVK 74
Query: 333 ILSSYSNPDFKA--LVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHS 390
+ K+ LV+E++P GSL +L H + + + L + + YLH
Sbjct: 75 YKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHC--VGLAQLLLFAQQICEGMAYLH---- 128
Query: 391 SVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVR-QTMTMATIGYMAPEYGLE 449
+ H IH L N+LLD + + + DFG+ K + EG + R + + + + APE E
Sbjct: 129 AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKE 188
Query: 450 GIVSAKCDVYSYGVLLMETFT 470
DV+S+GV L E T
Sbjct: 189 CKFYYASDVWSFGVTLYELLT 209
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 95/201 (47%), Gaps = 17/201 (8%)
Query: 280 LGTSSFGSV----YKGTISDGTD--VAIKVFNLQLERAFRS-FDSECEVLRNVRHRNLIK 332
LG FG V Y T +DGT VA+K RS + E E+LR + H +++K
Sbjct: 17 LGEGHFGKVSLYCYDPT-NDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVK 75
Query: 333 ILSSYSNPDFKA--LVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHS 390
+ K+ LV+E++P GSL +L H + + + L + + YLH
Sbjct: 76 YKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHC--VGLAQLLLFAQQICEGMAYLH---- 129
Query: 391 SVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVR-QTMTMATIGYMAPEYGLE 449
+ H IH L N+LLD + + + DFG+ K + EG + R + + + + APE E
Sbjct: 130 AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKE 189
Query: 450 GIVSAKCDVYSYGVLLMETFT 470
DV+S+GV L E T
Sbjct: 190 CKFYYASDVWSFGVTLYELLT 210
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 97/213 (45%), Gaps = 20/213 (9%)
Query: 273 EFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLER-----AFRSFDSECEVLRNVRH 327
FNE ++G FG VY GT+ D I L R F +E ++++ H
Sbjct: 30 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 87
Query: 328 RNLIKILS----SYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALE 383
N++ +L S +P +VL +M +G L ++ + + + + + + V ++
Sbjct: 88 PNVLSLLGICLRSEGSP---LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMK 144
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMAT--IGY 441
YL +S +H DL N +LDE V+DFG+ + + + E T A + +
Sbjct: 145 YL----ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 200
Query: 442 MAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRP 474
MA E + K DV+S+GVLL E TR P
Sbjct: 201 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 97/215 (45%), Gaps = 18/215 (8%)
Query: 271 TDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLERA---FRSFDSECEVLRNVR 326
+D + +LG V+ + D DVA+KV L R + F E + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 327 HRNLIKI-----LSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSA 381
H ++ + + + P +V+E++ +L +++ + + ++ D A
Sbjct: 71 HPAIVAVYDTGEAETPAGP-LPYIVMEYVDGVTLRDIVHTEGP-MTPKRAIEVIADACQA 128
Query: 382 LEYLH-NGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMT-MATI 439
L + H NG IIH D+KP NI++ V DFGI + + + +SV QT + T
Sbjct: 129 LNFSHQNG-----IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTA 183
Query: 440 GYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRP 474
Y++PE V A+ DVYS G +L E T + P
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 104/216 (48%), Gaps = 29/216 (13%)
Query: 280 LGTSSFGSVY--------KGTISDGTDVAIKVFNLQL-ERAFRSFDSECEVLRNV-RHRN 329
LG +FG V K + T VA+K+ E+ SE E+++ + +H+N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 330 LIKILSSYSNPDFKALVLEFMPNGSLEKWL---------YSHNYFLDILERLN------I 374
+I +L + + +++E+ G+L ++L YS+N + E+L+
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 375 MIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTM 434
V +EYL +S IH DL N+L+ E+ V ++DFG+ + + + + T
Sbjct: 145 AYQVARGMEYL----ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 200
Query: 435 TMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
+ +MAPE + I + + DV+S+GVLL E FT
Sbjct: 201 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 97/213 (45%), Gaps = 20/213 (9%)
Query: 273 EFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLER-----AFRSFDSECEVLRNVRH 327
FNE ++G FG VY GT+ D I L R F +E ++++ H
Sbjct: 31 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 88
Query: 328 RNLIKILS----SYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALE 383
N++ +L S +P +VL +M +G L ++ + + + + + + V ++
Sbjct: 89 PNVLSLLGICLRSEGSP---LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMK 145
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMAT--IGY 441
YL +S +H DL N +LDE V+DFG+ + + + E T A + +
Sbjct: 146 YL----ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 201
Query: 442 MAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRP 474
MA E + K DV+S+GVLL E TR P
Sbjct: 202 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 104/216 (48%), Gaps = 29/216 (13%)
Query: 280 LGTSSFGSVY--------KGTISDGTDVAIKVFNLQL-ERAFRSFDSECEVLRNV-RHRN 329
LG +FG V K + T VA+K+ E+ SE E+++ + +H+N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 330 LIKILSSYSNPDFKALVLEFMPNGSLEKWL---------YSHNYFLDILERLN------I 374
+I +L + + +++E+ G+L ++L YS+N + E+L+
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 375 MIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTM 434
V +EYL +S IH DL N+L+ E+ V ++DFG+ + + + + T
Sbjct: 148 AYQVARGMEYL----ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 203
Query: 435 TMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
+ +MAPE + I + + DV+S+GVLL E FT
Sbjct: 204 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 106/213 (49%), Gaps = 21/213 (9%)
Query: 259 WRRTSYLDIQRATDEFNECNLLGTSSFGSVY-KGTISDGTDVAIK-VFNLQLERAFRSFD 316
W++ + DI++ EF E LGT +F V + G A+K + L+ S +
Sbjct: 13 WKKQAE-DIKKIF-EFKET--LGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIE 68
Query: 317 SECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 376
+E VLR ++H N++ + Y +P+ LV++ + G L + ++ + + ++
Sbjct: 69 NEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTE-KDASTLIR 127
Query: 377 DVGSALEYLHNGHSSVHIIHCDLKPTNILL---DENMVAHVSDFGIYKLLGEGEDSVRQT 433
V A+ YLH + I+H DLKP N+L DE +SDFG+ K+ G+G+
Sbjct: 128 QVLDAVYYLHR----MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGD-----V 178
Query: 434 MTMA--TIGYMAPEYGLEGIVSAKCDVYSYGVL 464
M+ A T GY+APE + S D +S GV+
Sbjct: 179 MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 211
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 97/215 (45%), Gaps = 18/215 (8%)
Query: 271 TDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLERA---FRSFDSECEVLRNVR 326
+D + +LG V+ + D DVA+KV L R + F E + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 327 HRNLIKI-----LSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSA 381
H ++ + + + P +V+E++ +L +++ + + ++ D A
Sbjct: 71 HPAIVAVYDTGEAETPAGP-LPYIVMEYVDGVTLRDIVHTEGP-MTPKRAIEVIADACQA 128
Query: 382 LEYLH-NGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMT-MATI 439
L + H NG IIH D+KP NI++ V DFGI + + + +SV QT + T
Sbjct: 129 LNFSHQNG-----IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTA 183
Query: 440 GYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRP 474
Y++PE V A+ DVYS G +L E T + P
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 97/213 (45%), Gaps = 20/213 (9%)
Query: 273 EFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLER-----AFRSFDSECEVLRNVRH 327
FNE ++G FG VY GT+ D I L R F +E ++++ H
Sbjct: 28 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 85
Query: 328 RNLIKILS----SYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALE 383
N++ +L S +P +VL +M +G L ++ + + + + + + V ++
Sbjct: 86 PNVLSLLGICLRSEGSP---LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMK 142
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMAT--IGY 441
YL +S +H DL N +LDE V+DFG+ + + + E T A + +
Sbjct: 143 YL----ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 198
Query: 442 MAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRP 474
MA E + K DV+S+GVLL E TR P
Sbjct: 199 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 231
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 104/216 (48%), Gaps = 29/216 (13%)
Query: 280 LGTSSFGSVY--------KGTISDGTDVAIKVFNLQL-ERAFRSFDSECEVLRNV-RHRN 329
LG +FG V K + T VA+K+ E+ SE E+++ + +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 330 LIKILSSYSNPDFKALVLEFMPNGSLEKWL---------YSHNYFLDILERLN------I 374
+I +L + + +++E+ G+L ++L YS+N + E+L+
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 375 MIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTM 434
V +EYL +S IH DL N+L+ E+ V ++DFG+ + + + + T
Sbjct: 156 AYQVARGMEYL----ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 211
Query: 435 TMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
+ +MAPE + I + + DV+S+GVLL E FT
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 99/203 (48%), Gaps = 18/203 (8%)
Query: 271 TDEFNECNLLGTSSFGSVY--KGTISDGTDVAIKVFNLQLERAFRSFDS---ECEVLRNV 325
+D + +LG SFG V K I+ G + A+KV + + + +S E ++L+ +
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 89
Query: 326 RHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYL 385
H N++K+ + + + LV E G L + S F ++ + I+ V S + Y+
Sbjct: 90 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITYM 148
Query: 386 HNGHSSVHIIHCDLKPTNILLD---ENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYM 442
H I+H DLKP N+LL+ ++ + DFG L E S + + T Y+
Sbjct: 149 HKNK----IVHRDLKPENLLLESKSKDANIRIIDFG---LSTHFEASKKMKDKIGTAYYI 201
Query: 443 APEYGLEGIVSAKCDVYSYGVLL 465
APE L G KCDV+S GV+L
Sbjct: 202 APEV-LHGTYDEKCDVWSTGVIL 223
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 97/213 (45%), Gaps = 20/213 (9%)
Query: 273 EFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLER-----AFRSFDSECEVLRNVRH 327
FNE ++G FG VY GT+ D I L R F +E ++++ H
Sbjct: 32 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 89
Query: 328 RNLIKILS----SYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALE 383
N++ +L S +P +VL +M +G L ++ + + + + + + V ++
Sbjct: 90 PNVLSLLGICLRSEGSP---LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMK 146
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMAT--IGY 441
YL +S +H DL N +LDE V+DFG+ + + + E T A + +
Sbjct: 147 YL----ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 202
Query: 442 MAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRP 474
MA E + K DV+S+GVLL E TR P
Sbjct: 203 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 103/223 (46%), Gaps = 29/223 (13%)
Query: 272 DEFNECNLLGTSSFGSVYKGTISDGTD-------VAIKVFNLQLERA-FRSFDSECEVLR 323
D N LG +FG V + + G D VA+K+ + R+ SE ++L
Sbjct: 28 DRLNLGKPLGRGAFGQVIEAD-AFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILI 86
Query: 324 NVRHR-NLIKILSSYSNPDFKALVL-EFMPNGSLEKWLYS--------------HNYFLD 367
++ H N++ +L + + P +V+ EF G+L +L S + FL
Sbjct: 87 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLT 146
Query: 368 ILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGE 427
+ + V +E+L +S IH DL NILL E V + DFG+ + + +
Sbjct: 147 LEHLICYSFQVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDP 202
Query: 428 DSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
D VR+ + +MAPE + + + + DV+S+GVLL E F+
Sbjct: 203 DXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 103/220 (46%), Gaps = 26/220 (11%)
Query: 272 DEFNECNLLGTSSFGSVYKGTISDGTD-------VAIKVFNLQLERA-FRSFDSECEVLR 323
D N LG +FG V + + G D VA+K+ + R+ SE ++L
Sbjct: 27 DRLNLGKPLGRGAFGQVIEAD-AFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILI 85
Query: 324 NVRHR-NLIKILSSYSNPDFKALVL-EFMPNGSLEKWLYS-----------HNYFLDILE 370
++ H N++ +L + + P +V+ EF G+L +L S + FL +
Sbjct: 86 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEH 145
Query: 371 RLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSV 430
+ V +E+L +S IH DL NILL E V + DFG+ + + + D V
Sbjct: 146 LICYSFQVAKGMEFL----ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 201
Query: 431 RQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
R+ + +MAPE + + + + DV+S+GVLL E F+
Sbjct: 202 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 104/216 (48%), Gaps = 29/216 (13%)
Query: 280 LGTSSFGSVY--------KGTISDGTDVAIKVFNLQL-ERAFRSFDSECEVLRNV-RHRN 329
LG +FG V K + T VA+K+ E+ SE E+++ + +H+N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 330 LIKILSSYSNPDFKALVLEFMPNGSLEKWL---------YSHNYFLDILERLN------I 374
+I +L + + +++E+ G+L ++L YS+N + E+L+
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 375 MIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTM 434
V +EYL +S IH DL N+L+ E+ V ++DFG+ + + + + T
Sbjct: 149 AYQVARGMEYL----ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 204
Query: 435 TMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
+ +MAPE + I + + DV+S+GVLL E FT
Sbjct: 205 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 102/211 (48%), Gaps = 17/211 (8%)
Query: 272 DEFNECNLLGTSSFGSVYKGTISDGTDV-AIKVFNLQ--LER-AFRSFDSECEVLRNVRH 327
D F +G SFG V +D + A+K N Q +ER R+ E ++++ + H
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH 74
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
L+ + S+ + + +V++ + G L L + +F + +L + ++ AL+YL N
Sbjct: 75 PFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKL-FICELVMALDYLQN 133
Query: 388 GHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMA-TIGYMAPEY 446
IIH D+KP NILLDE+ H++DF I +L Q TMA T YMAPE
Sbjct: 134 QR----IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE----TQITTMAGTKPYMAPEM 185
Query: 447 --GLEGI-VSAKCDVYSYGVLLMETFTRKRP 474
+G S D +S GV E +RP
Sbjct: 186 FSSRKGAGYSFAVDWWSLGVTAYELLRGRRP 216
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 97/213 (45%), Gaps = 20/213 (9%)
Query: 273 EFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLER-----AFRSFDSECEVLRNVRH 327
FNE ++G FG VY GT+ D I L R F +E ++++ H
Sbjct: 33 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 90
Query: 328 RNLIKILS----SYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALE 383
N++ +L S +P +VL +M +G L ++ + + + + + + V ++
Sbjct: 91 PNVLSLLGICLRSEGSP---LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMK 147
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMAT--IGY 441
YL +S +H DL N +LDE V+DFG+ + + + E T A + +
Sbjct: 148 YL----ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 203
Query: 442 MAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRP 474
MA E + K DV+S+GVLL E TR P
Sbjct: 204 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 18/203 (8%)
Query: 271 TDEFNECNLLGTSSFGSVY--KGTISDGTDVAIKVFNLQLERAFRSFDS---ECEVLRNV 325
+D + +LG SFG V K I+ G + A+KV + + + +S E ++L+ +
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 106
Query: 326 RHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYL 385
H N++K+ + + + LV E G L + S F ++ + I+ V S + Y+
Sbjct: 107 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITYM 165
Query: 386 HNGHSSVHIIHCDLKPTNILLD---ENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYM 442
H I+H DLKP N+LL+ ++ + DFG+ E S + + T Y+
Sbjct: 166 HKNK----IVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKMKDKIGTAYYI 218
Query: 443 APEYGLEGIVSAKCDVYSYGVLL 465
APE L G KCDV+S GV+L
Sbjct: 219 APEV-LHGTYDEKCDVWSTGVIL 240
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 18/203 (8%)
Query: 271 TDEFNECNLLGTSSFGSVY--KGTISDGTDVAIKVFNLQLERAFRSFDS---ECEVLRNV 325
+D + +LG SFG V K I+ G + A+KV + + + +S E ++L+ +
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 107
Query: 326 RHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYL 385
H N++K+ + + + LV E G L + S F ++ + I+ V S + Y+
Sbjct: 108 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITYM 166
Query: 386 HNGHSSVHIIHCDLKPTNILLD---ENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYM 442
H I+H DLKP N+LL+ ++ + DFG+ E S + + T Y+
Sbjct: 167 HKNK----IVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKMKDKIGTAYYI 219
Query: 443 APEYGLEGIVSAKCDVYSYGVLL 465
APE L G KCDV+S GV+L
Sbjct: 220 APEV-LHGTYDEKCDVWSTGVIL 241
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 104/216 (48%), Gaps = 29/216 (13%)
Query: 280 LGTSSFGSVY--------KGTISDGTDVAIKVFNLQL-ERAFRSFDSECEVLRNV-RHRN 329
LG +FG V K + T VA+K+ E+ SE E+++ + +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 330 LIKILSSYSNPDFKALVLEFMPNGSLEKWL---------YSHNYFLDILERLN------I 374
+I +L + + +++E+ G+L ++L YS+N + E+L+
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 375 MIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTM 434
V +EYL +S IH DL N+L+ E+ V ++DFG+ + + + + T
Sbjct: 156 AYQVARGMEYL----ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 211
Query: 435 TMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
+ +MAPE + I + + DV+S+GVLL E FT
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 104/216 (48%), Gaps = 29/216 (13%)
Query: 280 LGTSSFGSVY--------KGTISDGTDVAIKVFNLQL-ERAFRSFDSECEVLRNV-RHRN 329
LG +FG V K + T VA+K+ E+ SE E+++ + +H+N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 330 LIKILSSYSNPDFKALVLEFMPNGSLEKWL---------YSHNYFLDILERLN------I 374
+I +L + + +++E+ G+L ++L YS+N + E+L+
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 375 MIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTM 434
V +EYL +S IH DL N+L+ E+ V ++DFG+ + + + + T
Sbjct: 197 AYQVARGMEYL----ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 252
Query: 435 TMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
+ +MAPE + I + + DV+S+GVLL E FT
Sbjct: 253 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 18/203 (8%)
Query: 271 TDEFNECNLLGTSSFGSVY--KGTISDGTDVAIKVFNLQLERAFRSFDS---ECEVLRNV 325
+D + +LG SFG V K I+ G + A+KV + + + +S E ++L+ +
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 326 RHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYL 385
H N++K+ + + + LV E G L + S F ++ + I+ V S + Y+
Sbjct: 84 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITYM 142
Query: 386 HNGHSSVHIIHCDLKPTNILLD---ENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYM 442
H I+H DLKP N+LL+ ++ + DFG+ E S + + T Y+
Sbjct: 143 HKNK----IVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKMKDKIGTAYYI 195
Query: 443 APEYGLEGIVSAKCDVYSYGVLL 465
APE L G KCDV+S GV+L
Sbjct: 196 APEV-LHGTYDEKCDVWSTGVIL 217
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 86/201 (42%), Gaps = 17/201 (8%)
Query: 280 LGTSSFGSVYKGTIS--DGTDVAIKVFNLQLE-----RAFRSFDSECEVLRNVRHRNLIK 332
LG SFG V +G G V++ V L+ + A F E + ++ HRNLI+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 333 ILSSYSNPDFKALVLEFMPNGSLEKWLYSH--NYFLDILERLNIMIDVGSALEYLHNGHS 390
+ P K +V E P GSL L H ++ L L R + V + YL
Sbjct: 86 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYL----E 138
Query: 391 SVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGED-SVRQTMTMATIGYMAPEYGLE 449
S IH DL N+LL + + DFG+ + L + +D V Q + APE
Sbjct: 139 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKT 198
Query: 450 GIVSAKCDVYSYGVLLMETFT 470
S D + +GV L E FT
Sbjct: 199 RTFSHASDTWMFGVTLWEMFT 219
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 92/193 (47%), Gaps = 8/193 (4%)
Query: 280 LGTSSFGSVYKGTISDGT-DVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYS 338
LG +G VY+G + VA+K + F E V++ ++H NL+++L +
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 325
Query: 339 NPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLHNGHSSVHIIHC 397
++ EFM G+L +L N ++ + L + + SA+EYL + IH
Sbjct: 326 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL----EKKNFIHR 381
Query: 398 DLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCD 457
+L N L+ EN + V+DFG+ +L+ G+ I + APE S K D
Sbjct: 382 NLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 440
Query: 458 VYSYGVLLMETFT 470
V+++GVLL E T
Sbjct: 441 VWAFGVLLWEIAT 453
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 101/210 (48%), Gaps = 17/210 (8%)
Query: 273 EFNECNLLGTSSFGSVYKGTISDGTDV----AIKVFN---LQLERAFRSFDSECEVLRNV 325
+F +LG SFG V+ G+D A+KV L++ R+ E ++L V
Sbjct: 26 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRT-KMERDILVEV 84
Query: 326 RHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYL 385
H ++K+ ++ L+L+F+ G L L F + + + ++ AL++L
Sbjct: 85 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF-YLAELALALDHL 143
Query: 386 HNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTM-ATIGYMAP 444
H S+ II+ DLKP NILLDE ++DFG+ K E D ++ + T+ YMAP
Sbjct: 144 H----SLGIIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCGTVEYMAP 196
Query: 445 EYGLEGIVSAKCDVYSYGVLLMETFTRKRP 474
E + D +S+GVL+ E T P
Sbjct: 197 EVVNRRGHTQSADWWSFGVLMFEMLTGTLP 226
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 101/210 (48%), Gaps = 17/210 (8%)
Query: 273 EFNECNLLGTSSFGSVYKGTISDGTDV----AIKVFN---LQLERAFRSFDSECEVLRNV 325
+F +LG SFG V+ G+D A+KV L++ R+ E ++L V
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRT-KMERDILVEV 83
Query: 326 RHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYL 385
H ++K+ ++ L+L+F+ G L L F + + + ++ AL++L
Sbjct: 84 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF-YLAELALALDHL 142
Query: 386 HNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTM-ATIGYMAP 444
H S+ II+ DLKP NILLDE ++DFG+ K E D ++ + T+ YMAP
Sbjct: 143 H----SLGIIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCGTVEYMAP 195
Query: 445 EYGLEGIVSAKCDVYSYGVLLMETFTRKRP 474
E + D +S+GVL+ E T P
Sbjct: 196 EVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 86/201 (42%), Gaps = 17/201 (8%)
Query: 280 LGTSSFGSVYKGTIS--DGTDVAIKVFNLQLE-----RAFRSFDSECEVLRNVRHRNLIK 332
LG SFG V +G G V++ V L+ + A F E + ++ HRNLI+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 333 ILSSYSNPDFKALVLEFMPNGSLEKWLYSH--NYFLDILERLNIMIDVGSALEYLHNGHS 390
+ P K +V E P GSL L H ++ L L R + V + YL
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYL----E 128
Query: 391 SVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGED-SVRQTMTMATIGYMAPEYGLE 449
S IH DL N+LL + + DFG+ + L + +D V Q + APE
Sbjct: 129 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKT 188
Query: 450 GIVSAKCDVYSYGVLLMETFT 470
S D + +GV L E FT
Sbjct: 189 RTFSHASDTWMFGVTLWEMFT 209
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 99/213 (46%), Gaps = 26/213 (12%)
Query: 280 LGTSSFGSVYKG------TISDGTDVAIKVFNLQLERA-FRSFDSECEVLRNVRHR-NLI 331
LG +FG V + + VA+K+ + R+ SE ++L ++ H N++
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 332 KILSSYSNPDFKALVL-EFMPNGSLEKWLYS-------------HNYFLDILERLNIMID 377
+L + + P +V+ EF G+L +L S + FL + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 378 VGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMA 437
V +E+L +S IH DL NILL E V + DFG+ + + + D VR+
Sbjct: 157 VAKGMEFL----ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 438 TIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
+ +MAPE + + + + DV+S+GVLL E F+
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 103/220 (46%), Gaps = 21/220 (9%)
Query: 255 PLAIWRRTSYLDIQRATDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRS 314
P W + ++ +I R + + + LG FG V+ T + T VA+K + +
Sbjct: 168 PQKPWEKDAW-EIPRESLKLEKK--LGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEA 223
Query: 315 FDSECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERL-N 373
F +E V++ ++H L+K+ + + ++ EFM GSL +L S L +L +
Sbjct: 224 FLAEANVMKTLQHDKLVKLHAVVTKEPI-YIITEFMAKGSLLDFLKSDEGSKQPLPKLID 282
Query: 374 IMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQT 433
+ + ++ + IH DL+ NIL+ ++V ++DFG+ ++ +
Sbjct: 283 FSAQIAEGMAFIEQRN----YIHRDLRAANILVSASLVCKIADFGLARVGAK-------- 330
Query: 434 MTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKR 473
I + APE G + K DV+S+G+LLME T R
Sbjct: 331 ---FPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGR 367
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 86/201 (42%), Gaps = 17/201 (8%)
Query: 280 LGTSSFGSVYKGTIS--DGTDVAIKVFNLQLE-----RAFRSFDSECEVLRNVRHRNLIK 332
LG SFG V +G G V++ V L+ + A F E + ++ HRNLI+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 333 ILSSYSNPDFKALVLEFMPNGSLEKWLYSH--NYFLDILERLNIMIDVGSALEYLHNGHS 390
+ P K +V E P GSL L H ++ L L R + V + YL
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYL----E 132
Query: 391 SVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDS-VRQTMTMATIGYMAPEYGLE 449
S IH DL N+LL + + DFG+ + L + +D V Q + APE
Sbjct: 133 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 192
Query: 450 GIVSAKCDVYSYGVLLMETFT 470
S D + +GV L E FT
Sbjct: 193 RTFSHASDTWMFGVTLWEMFT 213
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 86/201 (42%), Gaps = 17/201 (8%)
Query: 280 LGTSSFGSVYKGTIS--DGTDVAIKVFNLQLE-----RAFRSFDSECEVLRNVRHRNLIK 332
LG SFG V +G G V++ V L+ + A F E + ++ HRNLI+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 333 ILSSYSNPDFKALVLEFMPNGSLEKWLYSH--NYFLDILERLNIMIDVGSALEYLHNGHS 390
+ P K +V E P GSL L H ++ L L R + V + YL
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYL----E 128
Query: 391 SVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDS-VRQTMTMATIGYMAPEYGLE 449
S IH DL N+LL + + DFG+ + L + +D V Q + APE
Sbjct: 129 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 188
Query: 450 GIVSAKCDVYSYGVLLMETFT 470
S D + +GV L E FT
Sbjct: 189 RTFSHASDTWMFGVTLWEMFT 209
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 102/216 (47%), Gaps = 29/216 (13%)
Query: 280 LGTSSFGSVY--------KGTISDGTDVAIKVFNLQL-ERAFRSFDSECEVLRNV-RHRN 329
LG +FG V K + T VA+K+ E+ SE E+++ + +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 330 LIKILSSYSNPDFKALVLEFMPNGSLEKWLY-------------SHN--YFLDILERLNI 374
+I +L + + +++E+ G+L ++L SHN L + ++
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 375 MIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTM 434
V +EYL +S IH DL N+L+ E+ V ++DFG+ + + + + T
Sbjct: 156 AYQVARGMEYL----ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTN 211
Query: 435 TMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
+ +MAPE + I + + DV+S+GVLL E FT
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 102/216 (47%), Gaps = 29/216 (13%)
Query: 280 LGTSSFGSVY--------KGTISDGTDVAIKVF-NLQLERAFRSFDSECEVLRNV-RHRN 329
LG +FG V K + VA+K+ + E+ SE E+++ + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 330 LIKILSSYSNPDFKALVLEFMPNGSLEKWLYSH-----NYFLDI----------LERLNI 374
+I +L + + +++E+ G+L ++L + Y DI + ++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 375 MIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTM 434
+ +EYL +S IH DL N+L+ EN V ++DFG+ + + + + T
Sbjct: 163 TYQLARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTN 218
Query: 435 TMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
+ +MAPE + + + + DV+S+GVL+ E FT
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 86/201 (42%), Gaps = 17/201 (8%)
Query: 280 LGTSSFGSVYKGTIS--DGTDVAIKVFNLQLE-----RAFRSFDSECEVLRNVRHRNLIK 332
LG SFG V +G G V++ V L+ + A F E + ++ HRNLI+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 333 ILSSYSNPDFKALVLEFMPNGSLEKWLYSH--NYFLDILERLNIMIDVGSALEYLHNGHS 390
+ P K +V E P GSL L H ++ L L R + V + YL
Sbjct: 86 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYL----E 138
Query: 391 SVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDS-VRQTMTMATIGYMAPEYGLE 449
S IH DL N+LL + + DFG+ + L + +D V Q + APE
Sbjct: 139 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 198
Query: 450 GIVSAKCDVYSYGVLLMETFT 470
S D + +GV L E FT
Sbjct: 199 RTFSHASDTWMFGVTLWEMFT 219
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 101/209 (48%), Gaps = 17/209 (8%)
Query: 274 FNECNLLGTSSFGSVY---KGTISD-GTDVAIKVFN---LQLERAFRSFDSECEVLRNVR 326
F +LG SFG V+ K T D G A+KV L++ R+ E ++L +V
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRT-KMERDILADVN 88
Query: 327 HRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLH 386
H ++K+ ++ L+L+F+ G L L F + + + ++ L++LH
Sbjct: 89 HPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF-YLAELALGLDHLH 147
Query: 387 NGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTM-ATIGYMAPE 445
S+ II+ DLKP NILLDE ++DFG+ K E D ++ + T+ YMAPE
Sbjct: 148 ----SLGIIYRDLKPENILLDEEGHIKLTDFGLSK---EAIDHEKKAYSFCGTVEYMAPE 200
Query: 446 YGLEGIVSAKCDVYSYGVLLMETFTRKRP 474
S D +SYGVL+ E T P
Sbjct: 201 VVNRQGHSHSADWWSYGVLMFEMLTGSLP 229
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 86/201 (42%), Gaps = 17/201 (8%)
Query: 280 LGTSSFGSVYKGTIS--DGTDVAIKVFNLQLE-----RAFRSFDSECEVLRNVRHRNLIK 332
LG SFG V +G G V++ V L+ + A F E + ++ HRNLI+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 333 ILSSYSNPDFKALVLEFMPNGSLEKWLYSH--NYFLDILERLNIMIDVGSALEYLHNGHS 390
+ P K +V E P GSL L H ++ L L R + V + YL
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYL----E 132
Query: 391 SVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDS-VRQTMTMATIGYMAPEYGLE 449
S IH DL N+LL + + DFG+ + L + +D V Q + APE
Sbjct: 133 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 192
Query: 450 GIVSAKCDVYSYGVLLMETFT 470
S D + +GV L E FT
Sbjct: 193 RTFSHASDTWMFGVTLWEMFT 213
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 92/193 (47%), Gaps = 8/193 (4%)
Query: 280 LGTSSFGSVYKGTISDGT-DVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYS 338
LG +G VY+G + VA+K + F E V++ ++H NL+++L +
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 283
Query: 339 NPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLHNGHSSVHIIHC 397
++ EFM G+L +L N ++ + L + + SA+EYL + IH
Sbjct: 284 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK----NFIHR 339
Query: 398 DLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCD 457
+L N L+ EN + V+DFG+ +L+ G+ I + APE S K D
Sbjct: 340 NLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 398
Query: 458 VYSYGVLLMETFT 470
V+++GVLL E T
Sbjct: 399 VWAFGVLLWEIAT 411
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 101/210 (48%), Gaps = 17/210 (8%)
Query: 273 EFNECNLLGTSSFGSVYKGTISDGTDV----AIKVFN---LQLERAFRSFDSECEVLRNV 325
+F +LG SFG V+ G+D A+KV L++ R+ E ++L V
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRT-KMERDILVEV 83
Query: 326 RHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYL 385
H ++K+ ++ L+L+F+ G L L F + + + ++ AL++L
Sbjct: 84 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF-YLAELALALDHL 142
Query: 386 HNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTM-ATIGYMAP 444
H S+ II+ DLKP NILLDE ++DFG+ K E D ++ + T+ YMAP
Sbjct: 143 H----SLGIIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCGTVEYMAP 195
Query: 445 EYGLEGIVSAKCDVYSYGVLLMETFTRKRP 474
E + D +S+GVL+ E T P
Sbjct: 196 EVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 86/201 (42%), Gaps = 17/201 (8%)
Query: 280 LGTSSFGSVYKGTIS--DGTDVAIKVFNLQLE-----RAFRSFDSECEVLRNVRHRNLIK 332
LG SFG V +G G V++ V L+ + A F E + ++ HRNLI+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 333 ILSSYSNPDFKALVLEFMPNGSLEKWLYSH--NYFLDILERLNIMIDVGSALEYLHNGHS 390
+ P K +V E P GSL L H ++ L L R + V + YL
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYL----E 128
Query: 391 SVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDS-VRQTMTMATIGYMAPEYGLE 449
S IH DL N+LL + + DFG+ + L + +D V Q + APE
Sbjct: 129 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 188
Query: 450 GIVSAKCDVYSYGVLLMETFT 470
S D + +GV L E FT
Sbjct: 189 RTFSHASDTWMFGVTLWEMFT 209
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 91/193 (47%), Gaps = 8/193 (4%)
Query: 280 LGTSSFGSVYKGTISDGT-DVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYS 338
LG +G VY+G + VA+K + F E V++ ++H NL+++L +
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 286
Query: 339 NPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLHNGHSSVHIIHC 397
++ EFM G+L +L N + + L + + SA+EYL + IH
Sbjct: 287 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK----NFIHR 342
Query: 398 DLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCD 457
+L N L+ EN + V+DFG+ +L+ G+ I + APE S K D
Sbjct: 343 NLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 401
Query: 458 VYSYGVLLMETFT 470
V+++GVLL E T
Sbjct: 402 VWAFGVLLWEIAT 414
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 94/213 (44%), Gaps = 29/213 (13%)
Query: 273 EFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLI 331
+F E L+G+ FG V+K DG IK E+A R E + L + H N++
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAER----EVKALAKLDHVNIV 67
Query: 332 KILSSYSNPDFKA----------------LVLEFMPNGSLEKWLYSHN-YFLDILERLNI 374
+ D+ + +EF G+LE+W+ LD + L +
Sbjct: 68 HYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALEL 127
Query: 375 MIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTM 434
+ ++Y+H S +I+ DLKP+NI L + + DFG+ L ++ ++
Sbjct: 128 FEQITKGVDYIH----SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSL---KNDGKRXR 180
Query: 435 TMATIGYMAPEYGLEGIVSAKCDVYSYGVLLME 467
+ T+ YM+PE + D+Y+ G++L E
Sbjct: 181 SKGTLRYMSPEQISSQDYGKEVDLYALGLILAE 213
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 29/216 (13%)
Query: 280 LGTSSFGSVY--------KGTISDGTDVAIKVFNLQL-ERAFRSFDSECEVLRNV-RHRN 329
LG +FG V K + T VA+K+ E+ SE E+++ + +H+N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 330 LIKILSSYSNPDFKALVLEFMPNGSLEKWL---------YSHNYFLDILERLN------I 374
+I +L + + +++E+ G+L ++L Y +N + E+L+
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 375 MIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTM 434
V +EYL +S IH DL N+L+ E+ V ++DFG+ + + + + T
Sbjct: 141 AYQVARGMEYL----ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 196
Query: 435 TMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
+ +MAPE + I + + DV+S+GVLL E FT
Sbjct: 197 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 94/200 (47%), Gaps = 13/200 (6%)
Query: 280 LGTSSFGSV---YKGTISDGTDVAIKVFNLQLERA---FRSFDSECEVLRNVRHRNLIKI 333
LG FG V D T + V +L+ E E E+LRN+ H N++K
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 334 --LSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSS 391
+ + + L++EF+P+GSL+++L + +++ ++L + + ++YL S
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYL----GS 144
Query: 392 VHIIHCDLKPTNILLDENMVAHVSDFGIYKLL-GEGEDSVRQTMTMATIGYMAPEYGLEG 450
+H DL N+L++ + DFG+ K + + E + + + + APE ++
Sbjct: 145 RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQS 204
Query: 451 IVSAKCDVYSYGVLLMETFT 470
DV+S+GV L E T
Sbjct: 205 KFYIASDVWSFGVTLHELLT 224
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 30/216 (13%)
Query: 280 LGTSSFGSVYKGTISDGTD-------VAIKVFNLQLERA-FRSFDSECEVLRNVRHR-NL 330
LG +FG V + + G D VA+K+ + R+ SE ++L ++ H N+
Sbjct: 26 LGRGAFGQVIEAD-AFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV 84
Query: 331 IKILSSYSNPDFKALVL-EFMPNGSLEKWLYS---------------HNYFLDILERLNI 374
+ +L + + P +V+ EF G+L +L S + FL + +
Sbjct: 85 VNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 144
Query: 375 MIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTM 434
V +E+L +S IH DL NILL E V + DFG+ + + + D VR+
Sbjct: 145 SFQVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 200
Query: 435 TMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
+ +MAPE + + + + DV+S+GVLL E F+
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 94/200 (47%), Gaps = 13/200 (6%)
Query: 280 LGTSSFGSV---YKGTISDGTDVAIKVFNLQLERA---FRSFDSECEVLRNVRHRNLIKI 333
LG FG V D T + V +L+ E E E+LRN+ H N++K
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 334 --LSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSS 391
+ + + L++EF+P+GSL+++L + +++ ++L + + ++YL S
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYL----GS 132
Query: 392 VHIIHCDLKPTNILLDENMVAHVSDFGIYKLL-GEGEDSVRQTMTMATIGYMAPEYGLEG 450
+H DL N+L++ + DFG+ K + + E + + + + APE ++
Sbjct: 133 RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQS 192
Query: 451 IVSAKCDVYSYGVLLMETFT 470
DV+S+GV L E T
Sbjct: 193 KFYIASDVWSFGVTLHELLT 212
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 30/216 (13%)
Query: 280 LGTSSFGSVYKGTISDGTD-------VAIKVFNLQLERA-FRSFDSECEVLRNVRHR-NL 330
LG +FG V + + G D VA+K+ + R+ SE ++L ++ H N+
Sbjct: 35 LGRGAFGQVIEAD-AFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV 93
Query: 331 IKILSSYSNPDFKALVL-EFMPNGSLEKWLYS---------------HNYFLDILERLNI 374
+ +L + + P +V+ EF G+L +L S + FL + +
Sbjct: 94 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 153
Query: 375 MIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTM 434
V +E+L +S IH DL NILL E V + DFG+ + + + D VR+
Sbjct: 154 SFQVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 209
Query: 435 TMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
+ +MAPE + + + + DV+S+GVLL E F+
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 30/216 (13%)
Query: 280 LGTSSFGSVYKGTISDGTD-------VAIKVFNLQLERA-FRSFDSECEVLRNVRHR-NL 330
LG +FG V + + G D VA+K+ + R+ SE ++L ++ H N+
Sbjct: 26 LGRGAFGQVIEAD-AFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV 84
Query: 331 IKILSSYSNPDFKALVL-EFMPNGSLEKWLYS---------------HNYFLDILERLNI 374
+ +L + + P +V+ EF G+L +L S + FL + +
Sbjct: 85 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 144
Query: 375 MIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTM 434
V +E+L +S IH DL NILL E V + DFG+ + + + D VR+
Sbjct: 145 SFQVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 200
Query: 435 TMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
+ +MAPE + + + + DV+S+GVLL E F+
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 55/99 (55%), Gaps = 4/99 (4%)
Query: 372 LNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVR 431
++ V +E+L SS IH DL NILL EN V + DFG+ + + + D VR
Sbjct: 202 ISYSFQVARGMEFL----SSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVR 257
Query: 432 QTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
+ T + +MAPE + I S K DV+SYGVLL E F+
Sbjct: 258 KGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 99/237 (41%), Gaps = 42/237 (17%)
Query: 262 TSYLDIQRATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLERAFRSFDSECE 320
T Y +R +F E L+G+ FG V+K DG I+ E+A R E +
Sbjct: 2 TKYTVDKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAER----EVK 57
Query: 321 VLRNVRHRNLIKILSSYSNPDFKA-----------------------------LVLEFMP 351
L + H N++ + D+ + +EF
Sbjct: 58 ALAKLDHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCD 117
Query: 352 NGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENM 410
G+LE+W+ LD + L + + ++Y+H S +IH DLKP+NI L +
Sbjct: 118 KGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIH----SKKLIHRDLKPSNIFLVDTK 173
Query: 411 VAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLME 467
+ DFG+ L ++ ++T + T+ YM+PE + D+Y+ G++L E
Sbjct: 174 QVKIGDFGLVTSL---KNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAE 227
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 29/216 (13%)
Query: 280 LGTSSFGSVY--------KGTISDGTDVAIKVFNLQL-ERAFRSFDSECEVLRNV-RHRN 329
LG +FG V K + T VA+K+ E+ SE E+++ + +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 330 LIKILSSYSNPDFKALVLEFMPNGSLEKWL---------YSHNYFLDILERLN------I 374
+I +L + + +++E+ G+L ++L Y +N + E+L+
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 375 MIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTM 434
V +EYL +S IH DL N+L+ E+ V ++DFG+ + + + + T
Sbjct: 156 AYQVARGMEYL----ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 211
Query: 435 TMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
+ +MAPE + I + + DV+S+GVLL E FT
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 102/216 (47%), Gaps = 29/216 (13%)
Query: 280 LGTSSFGSVY--------KGTISDGTDVAIKVF-NLQLERAFRSFDSECEVLRNV-RHRN 329
LG +FG V K + VA+K+ + E+ SE E+++ + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 330 LIKILSSYSNPDFKALVLEFMPNGSLEKWLYSH-----NYFLDI----------LERLNI 374
+I +L + + +++E+ G+L ++L + Y DI + ++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 375 MIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTM 434
+ +EYL +S IH DL N+L+ EN V ++DFG+ + + + + T
Sbjct: 163 TYQLARGMEYL----ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTN 218
Query: 435 TMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
+ +MAPE + + + + DV+S+GVL+ E FT
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 87/186 (46%), Gaps = 15/186 (8%)
Query: 298 DVAIKVFNLQLERA---FRSFDSECEVLRNVRHRNLIKILSS--YSNP--DFKALVLEFM 350
DVA+KV L R + F E + + H ++ + ++ P +V+E++
Sbjct: 39 DVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYV 98
Query: 351 PNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLH-NGHSSVHIIHCDLKPTNILLDEN 409
+L +++ + + ++ D AL + H NG IIH D+KP NI++
Sbjct: 99 DGVTLRDIVHTEGP-MTPKRAIEVIADACQALNFSHQNG-----IIHRDVKPANIMISAT 152
Query: 410 MVAHVSDFGIYKLLGEGEDSVRQTMT-MATIGYMAPEYGLEGIVSAKCDVYSYGVLLMET 468
V DFGI + + + +SV QT + T Y++PE V A+ DVYS G +L E
Sbjct: 153 NAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEV 212
Query: 469 FTRKRP 474
T + P
Sbjct: 213 LTGEPP 218
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 95/205 (46%), Gaps = 19/205 (9%)
Query: 280 LGTSSFGSVYKGT-ISDGTDVAIK---VFNLQLERAFRSFDSECEVLRNVRHRNLIKILS 335
+G F VY+ + DG VA+K +F+L +A E ++L+ + H N+IK +
Sbjct: 40 IGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYA 99
Query: 336 SYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI---MIDVGSALEYLHNGHSSV 392
S+ + +VLE G L + + ++ + + + SALE++H S
Sbjct: 100 SFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH----SR 155
Query: 393 HIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIG---YMAPEYGLE 449
++H D+KP N+ + V + D G+ + S + T + +G YM+PE E
Sbjct: 156 RVMHRDIKPANVFITATGVVKLGDLGLGRFF-----SSKTTAAHSLVGTPYYMSPERIHE 210
Query: 450 GIVSAKCDVYSYGVLLMETFTRKRP 474
+ K D++S G LL E + P
Sbjct: 211 NGYNFKSDIWSLGCLLYEMAALQSP 235
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 30/216 (13%)
Query: 280 LGTSSFGSVYKGTISDGTD-------VAIKVFNLQLERA-FRSFDSECEVLRNVRHR-NL 330
LG +FG V + + G D VA+K+ + R+ SE ++L ++ H N+
Sbjct: 35 LGRGAFGQVIEAD-AFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV 93
Query: 331 IKILSSYSNPDFKALVL-EFMPNGSLEKWLYS---------------HNYFLDILERLNI 374
+ +L + + P +V+ EF G+L +L S + FL + +
Sbjct: 94 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 153
Query: 375 MIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTM 434
V +E+L +S IH DL NILL E V + DFG+ + + + D VR+
Sbjct: 154 SFQVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGD 209
Query: 435 TMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
+ +MAPE + + + + DV+S+GVLL E F+
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 102/216 (47%), Gaps = 29/216 (13%)
Query: 280 LGTSSFGSVY--------KGTISDGTDVAIKVF-NLQLERAFRSFDSECEVLRNV-RHRN 329
LG +FG V K + VA+K+ + E+ SE E+++ + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 330 LIKILSSYSNPDFKALVLEFMPNGSLEKWLYSH-----NYFLDI----------LERLNI 374
+I +L + + +++E+ G+L ++L + Y DI + ++
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 375 MIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTM 434
+ +EYL +S IH DL N+L+ EN V ++DFG+ + + + + T
Sbjct: 163 TYQLARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 435 TMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
+ +MAPE + + + + DV+S+GVL+ E FT
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 102/216 (47%), Gaps = 29/216 (13%)
Query: 280 LGTSSFGSVY--------KGTISDGTDVAIKVF-NLQLERAFRSFDSECEVLRNV-RHRN 329
LG +FG V K + VA+K+ + E+ SE E+++ + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 330 LIKILSSYSNPDFKALVLEFMPNGSLEKWLYSH-----NYFLDI----------LERLNI 374
+I +L + + +++E+ G+L ++L + Y DI + ++
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 375 MIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTM 434
+ +EYL +S IH DL N+L+ EN V ++DFG+ + + + + T
Sbjct: 163 TYQLARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 435 TMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
+ +MAPE + + + + DV+S+GVL+ E FT
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 101/216 (46%), Gaps = 29/216 (13%)
Query: 280 LGTSSFGSVY--------KGTISDGTDVAIKVF-NLQLERAFRSFDSECEVLRNV-RHRN 329
LG FG V K + VA+K+ + E+ SE E+++ + +H+N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 330 LIKILSSYSNPDFKALVLEFMPNGSLEKWLYSH-----NYFLDI----------LERLNI 374
+I +L + + +++E+ G+L ++L + Y DI + ++
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 375 MIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTM 434
+ +EYL +S IH DL N+L+ EN V ++DFG+ + + + + T
Sbjct: 209 TYQLARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 264
Query: 435 TMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
+ +MAPE + + + + DV+S+GVL+ E FT
Sbjct: 265 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 97/203 (47%), Gaps = 18/203 (8%)
Query: 271 TDEFNECNLLGTSSFGSVY--KGTISDGTDVAIKVFNLQLERAFRSFDS---ECEVLRNV 325
+D + +LG SFG V K I+ G + A+KV + + + +S E ++L+ +
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 326 RHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYL 385
H N+ K+ + + + LV E G L + S F ++ + I+ V S + Y
Sbjct: 84 DHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITYX 142
Query: 386 HNGHSSVHIIHCDLKPTNILLD---ENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYM 442
H I+H DLKP N+LL+ ++ + DFG+ E S + + T Y+
Sbjct: 143 HKNK----IVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKXKDKIGTAYYI 195
Query: 443 APEYGLEGIVSAKCDVYSYGVLL 465
APE L G KCDV+S GV+L
Sbjct: 196 APEV-LHGTYDEKCDVWSTGVIL 217
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 30/216 (13%)
Query: 280 LGTSSFGSVYKGTISDGTD-------VAIKVFNLQLERA-FRSFDSECEVLRNVRHR-NL 330
LG +FG V + + G D VA+K+ + R+ SE ++L ++ H N+
Sbjct: 26 LGRGAFGQVIEAD-AFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV 84
Query: 331 IKILSSYSNPDFKALVL-EFMPNGSLEKWLYS---------------HNYFLDILERLNI 374
+ +L + + P +V+ EF G+L +L S + FL + +
Sbjct: 85 VNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 144
Query: 375 MIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTM 434
V +E+L +S IH DL NILL E V + DFG+ + + + D VR+
Sbjct: 145 SFQVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 200
Query: 435 TMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
+ +MAPE + + + + DV+S+GVLL E F+
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 116/232 (50%), Gaps = 35/232 (15%)
Query: 274 FNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKI 333
+ C ++G SFG V++ + + +VAIK + ++ F+ + E +++R V+H N++ +
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESDEVAIK--KVLQDKRFK--NRELQIMRIVKHPNVVDL 97
Query: 334 LS-SYSNPD-----FKALVLEFMPNGSLEKWLYSHNYFLDILERLNI------MIDVGSA 381
+ YSN D F LVLE++P E + ++ + + + + M + +
Sbjct: 98 KAFFYSNGDKKDEVFLNLVLEYVP----ETVYRASRHYAKLKQTMPMLLIKLYMYQLLRS 153
Query: 382 LEYLHNGHSSVHIIHCDLKPTNILLD-ENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIG 440
L Y+H S+ I H D+KP N+LLD + V + DFG K+L GE +V + +
Sbjct: 154 LAYIH----SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVS---XICSRY 206
Query: 441 YMAPE--YGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVK 490
Y APE +G + D++S G ++ E + +F GE + + V+
Sbjct: 207 YRAPELIFGATN-YTTNIDIWSTGCVMAELMQGQ----PLFPGESGIDQLVE 253
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 30/216 (13%)
Query: 280 LGTSSFGSVYKGTISDGTD-------VAIKVFNLQLERA-FRSFDSECEVLRNVRHR-NL 330
LG +FG V + + G D VA+K+ + R+ SE ++L ++ H N+
Sbjct: 26 LGRGAFGQVIEAD-AFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV 84
Query: 331 IKILSSYSNPDFKALVL-EFMPNGSLEKWLYS---------------HNYFLDILERLNI 374
+ +L + + P +V+ EF G+L +L S + FL + +
Sbjct: 85 VNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 144
Query: 375 MIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTM 434
V +E+L +S IH DL NILL E V + DFG+ + + + D VR+
Sbjct: 145 SFQVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 200
Query: 435 TMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
+ +MAPE + + + + DV+S+GVLL E F+
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 30/216 (13%)
Query: 280 LGTSSFGSVYKGTISDGTD-------VAIKVFNLQLERA-FRSFDSECEVLRNVRHR-NL 330
LG +FG V + + G D VA+K+ + R+ SE ++L ++ H N+
Sbjct: 35 LGRGAFGQVIEAD-AFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV 93
Query: 331 IKILSSYSNPDFKALVL-EFMPNGSLEKWLYS---------------HNYFLDILERLNI 374
+ +L + + P +V+ EF G+L +L S + FL + +
Sbjct: 94 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 153
Query: 375 MIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTM 434
V +E+L +S IH DL NILL E V + DFG+ + + + D VR+
Sbjct: 154 SFQVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 209
Query: 435 TMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
+ +MAPE + + + + DV+S+GVLL E F+
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 87/187 (46%), Gaps = 17/187 (9%)
Query: 298 DVAIKVFNLQLERA---FRSFDSECEVLRNVRHRNLIKI-----LSSYSNPDFKALVLEF 349
DVA+KV L R + F E + + H ++ + + + P +V+E+
Sbjct: 39 DVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGP-LPYIVMEY 97
Query: 350 MPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLH-NGHSSVHIIHCDLKPTNILLDE 408
+ +L +++ + + ++ D AL + H NG IIH D+KP NI++
Sbjct: 98 VDGVTLRDIVHTEGP-MTPKRAIEVIADACQALNFSHQNG-----IIHRDVKPANIMISA 151
Query: 409 NMVAHVSDFGIYKLLGEGEDSVRQTMT-MATIGYMAPEYGLEGIVSAKCDVYSYGVLLME 467
V DFGI + + + +SV QT + T Y++PE V A+ DVYS G +L E
Sbjct: 152 TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYE 211
Query: 468 TFTRKRP 474
T + P
Sbjct: 212 VLTGEPP 218
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 30/216 (13%)
Query: 280 LGTSSFGSVYKGTISDGTD-------VAIKVFNLQLERA-FRSFDSECEVLRNVRHR-NL 330
LG +FG V + + G D VA+K+ + R+ SE ++L ++ H N+
Sbjct: 72 LGRGAFGQVIEAD-AFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV 130
Query: 331 IKILSSYSNPDFKALVL-EFMPNGSLEKWLYS---------------HNYFLDILERLNI 374
+ +L + + P +V+ EF G+L +L S + FL + +
Sbjct: 131 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 190
Query: 375 MIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTM 434
V +E+L +S IH DL NILL E V + DFG+ + + + D VR+
Sbjct: 191 SFQVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 246
Query: 435 TMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
+ +MAPE + + + + DV+S+GVLL E F+
Sbjct: 247 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 102/212 (48%), Gaps = 21/212 (9%)
Query: 280 LGTSSFGSVY--------KGTISDGTDVAIKVF-NLQLERAFRSFDSECEVLRNV-RHRN 329
LG +FG V K + VA+K+ + E+ SE E+++ + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 330 LIKILSSYSNPDFKALVLEFMPNGSLEKWLYSH-------NYFLD-ILERLNIMIDVGSA 381
+I +L + + +++E+ G+L ++L + +Y ++ + E D+ S
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 382 LEYLHNGH---SSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMAT 438
L G +S IH DL N+L+ EN V ++DFG+ + + + + T
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLP 222
Query: 439 IGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
+ +MAPE + + + + DV+S+GVL+ E FT
Sbjct: 223 VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 280 LGTSSFGSVYKGTISD------GTDVAIKVFNLQLE-RAFRSFDSECEVLRNVRHRNLIK 332
LG SFG VY+G D T VA+K N R F +E V++ ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 333 ILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLD---------ILERLNIMIDVGSALE 383
+L S +V+E M +G L+ +L S + + E + + ++ +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
YL+ + +H DL N ++ + + DFG+ + + E + + + + +MA
Sbjct: 145 YLN----AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 200
Query: 444 PEYGLEGIVSAKCDVYSYGVLLME 467
PE +G+ + D++S+GV+L E
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWE 224
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 280 LGTSSFGSVYKGTISD------GTDVAIKVFNLQLE-RAFRSFDSECEVLRNVRHRNLIK 332
LG SFG VY+G D T VA+K N R F +E V++ ++++
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 333 ILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLD---------ILERLNIMIDVGSALE 383
+L S +V+E M +G L+ +L S + + E + + ++ +
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 141
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
YL+ + +H DL N ++ + + DFG+ + + E + + + + +MA
Sbjct: 142 YLN----AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 197
Query: 444 PEYGLEGIVSAKCDVYSYGVLLME 467
PE +G+ + D++S+GV+L E
Sbjct: 198 PESLKDGVFTTSSDMWSFGVVLWE 221
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 101/216 (46%), Gaps = 29/216 (13%)
Query: 280 LGTSSFGSVY--------KGTISDGTDVAIKVF-NLQLERAFRSFDSECEVLRNV-RHRN 329
LG FG V K + VA+K+ + E+ SE E+++ + +H+N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 330 LIKILSSYSNPDFKALVLEFMPNGSLEKWLYSH-----NYFLDI----------LERLNI 374
+I +L + + +++E+ G+L ++L + Y DI + ++
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 375 MIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTM 434
+ +EYL +S IH DL N+L+ EN V ++DFG+ + + + + T
Sbjct: 155 TYQLARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 210
Query: 435 TMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
+ +MAPE + + + + DV+S+GVL+ E FT
Sbjct: 211 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 101/216 (46%), Gaps = 29/216 (13%)
Query: 280 LGTSSFGSVY--------KGTISDGTDVAIKVF-NLQLERAFRSFDSECEVLRNV-RHRN 329
LG FG V K + VA+K+ + E+ SE E+++ + +H+N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 330 LIKILSSYSNPDFKALVLEFMPNGSLEKWLYSH-----NYFLDI----------LERLNI 374
+I +L + + +++E+ G+L ++L + Y DI + ++
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 375 MIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTM 434
+ +EYL +S IH DL N+L+ EN V ++DFG+ + + + + T
Sbjct: 150 TYQLARGMEYL----ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 205
Query: 435 TMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
+ +MAPE + + + + DV+S+GVL+ E FT
Sbjct: 206 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 280 LGTSSFGSVYKGTISD------GTDVAIKVFNLQLE-RAFRSFDSECEVLRNVRHRNLIK 332
LG SFG VY+G D T VA+K N R F +E V++ ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 333 ILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLD---------ILERLNIMIDVGSALE 383
+L S +V+E M +G L+ +L S + + E + + ++ +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
YL+ + +H DL N ++ + + DFG+ + + E + + + + +MA
Sbjct: 145 YLN----AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 200
Query: 444 PEYGLEGIVSAKCDVYSYGVLLME 467
PE +G+ + D++S+GV+L E
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWE 224
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 30/216 (13%)
Query: 280 LGTSSFGSVYKGTISDGTD-------VAIKVFNLQLERA-FRSFDSECEVLRNVRHR-NL 330
LG +FG V + + G D VA+K+ + R+ SE ++L ++ H N+
Sbjct: 37 LGRGAFGQVIEAD-AFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV 95
Query: 331 IKILSSYSNPDFKALVL-EFMPNGSLEKWLYS---------------HNYFLDILERLNI 374
+ +L + + P +V+ EF G+L +L S + FL + +
Sbjct: 96 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICY 155
Query: 375 MIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTM 434
V +E+L +S IH DL NILL E V + DFG+ + + + D VR+
Sbjct: 156 SFQVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 211
Query: 435 TMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
+ +MAPE + + + + DV+S+GVLL E F+
Sbjct: 212 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 101/216 (46%), Gaps = 29/216 (13%)
Query: 280 LGTSSFGSVY--------KGTISDGTDVAIKVF-NLQLERAFRSFDSECEVLRNV-RHRN 329
LG FG V K + VA+K+ + E+ SE E+++ + +H+N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 330 LIKILSSYSNPDFKALVLEFMPNGSLEKWLYSH-----NYFLDI----------LERLNI 374
+I +L + + +++E+ G+L ++L + Y DI + ++
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 375 MIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTM 434
+ +EYL +S IH DL N+L+ EN V ++DFG+ + + + + T
Sbjct: 152 TYQLARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 207
Query: 435 TMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
+ +MAPE + + + + DV+S+GVL+ E FT
Sbjct: 208 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 101/216 (46%), Gaps = 29/216 (13%)
Query: 280 LGTSSFGSVY--------KGTISDGTDVAIKVF-NLQLERAFRSFDSECEVLRNV-RHRN 329
LG +FG V K + VA+K+ + E SE E+++ + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 330 LIKILSSYSNPDFKALVLEFMPNGSLEKWLYSH-----NYFLDI----------LERLNI 374
+I +L + + +++E+ G+L ++L + Y DI + ++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 375 MIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTM 434
+ +EYL +S IH DL N+L+ EN V ++DFG+ + + + + T
Sbjct: 163 TYQLARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 435 TMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
+ +MAPE + + + + DV+S+GVL+ E FT
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 87/187 (46%), Gaps = 17/187 (9%)
Query: 298 DVAIKVFNLQLERA---FRSFDSECEVLRNVRHRNLIKIL-----SSYSNPDFKALVLEF 349
DVA+KV L R + F E + + H ++ + + + P +V+E+
Sbjct: 56 DVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGP-LPYIVMEY 114
Query: 350 MPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLH-NGHSSVHIIHCDLKPTNILLDE 408
+ +L +++ + + ++ D AL + H NG IIH D+KP NI++
Sbjct: 115 VDGVTLRDIVHTEGP-MTPKRAIEVIADACQALNFSHQNG-----IIHRDVKPANIMISA 168
Query: 409 NMVAHVSDFGIYKLLGEGEDSVRQTMT-MATIGYMAPEYGLEGIVSAKCDVYSYGVLLME 467
V DFGI + + + +SV QT + T Y++PE V A+ DVYS G +L E
Sbjct: 169 TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYE 228
Query: 468 TFTRKRP 474
T + P
Sbjct: 229 VLTGEPP 235
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 101/216 (46%), Gaps = 29/216 (13%)
Query: 280 LGTSSFGSVY--------KGTISDGTDVAIKVF-NLQLERAFRSFDSECEVLRNV-RHRN 329
LG +FG V K + VA+K+ + E+ SE E+++ + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 330 LIKILSSYSNPDFKALVLEFMPNGSLEKWLYSH-----NYFLDI----------LERLNI 374
+I +L + + +++E+ G+L ++L + Y DI + ++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 375 MIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTM 434
+ +EYL +S IH DL N+L+ EN V ++DFG+ + + + T
Sbjct: 163 TYQLARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTN 218
Query: 435 TMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
+ +MAPE + + + + DV+S+GVL+ E FT
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 98/203 (48%), Gaps = 26/203 (12%)
Query: 280 LGTSSFGSVYKGTISDG-TDVAIKVF-------------NLQLERAFRSFDSECEVLRNV 325
LG+ ++G V +G ++ AIKV N +E+ +E +L+++
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 326 RHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYL 385
H N+IK+ + + + LV EF G L + + + + F D + NIM + S + YL
Sbjct: 104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKF-DECDAANIMKQILSGICYL 162
Query: 386 HNGHSSVHIIHCDLKPTNILLDEN---MVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYM 442
H +I+H D+KP NILL+ + + DFG+ + + + T Y+
Sbjct: 163 HKH----NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSK---DYKLRDRLGTAYYI 215
Query: 443 APEYGLEGIVSAKCDVYSYGVLL 465
APE L+ + KCDV+S GV++
Sbjct: 216 APEV-LKKKYNEKCDVWSCGVIM 237
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 90/208 (43%), Gaps = 18/208 (8%)
Query: 274 FNECNLLGTSSFGSVY-KGTISDGTDVAIKVFNL---QLERAFRSFDSECEVLRNVRHRN 329
F++ +G SFG+VY + + VAIK + Q ++ E L+ +RH N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 330 LIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGH 389
I+ Y LV+E+ GS L H L +E + L YLH
Sbjct: 116 TIQYRGCYLREHTAWLVMEYC-LGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH--- 171
Query: 390 SSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGL- 448
S ++IH D+K NILL E + + DFG ++ V T +MAPE L
Sbjct: 172 -SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV------GTPYWMAPEVILA 224
Query: 449 --EGIVSAKCDVYSYGVLLMETFTRKRP 474
EG K DV+S G+ +E RK P
Sbjct: 225 MDEGQYDGKVDVWSLGITCIELAERKPP 252
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 20/206 (9%)
Query: 280 LGTSSFGSV---YKGTISDGTDVAIKVFN---LQLERAFRSFDSECEVLRNVRHRNLIKI 333
LG SFG V Y T G VA+K+ N L + E LR +RH ++IK+
Sbjct: 16 LGEGSFGKVKLAYHTTT--GQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 73
Query: 334 LSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVH 393
+ D +V+E+ N L ++ + + E + SA+EY H
Sbjct: 74 YDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSE-QEARRFFQQIISAVEYCHRHK---- 127
Query: 394 IIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVS 453
I+H DLKP N+LLDE++ ++DFG+ ++ +G + + Y APE + G +
Sbjct: 128 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN---FLKTSCGSPNYAAPEV-ISGKLY 183
Query: 454 A--KCDVYSYGVLLMETFTRKRPTDE 477
A + DV+S GV+L R+ P D+
Sbjct: 184 AGPEVDVWSCGVILYVMLCRRLPFDD 209
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 20/206 (9%)
Query: 280 LGTSSFGSV---YKGTISDGTDVAIKVFN---LQLERAFRSFDSECEVLRNVRHRNLIKI 333
LG SFG V Y T G VA+K+ N L + E LR +RH ++IK+
Sbjct: 21 LGEGSFGKVKLAYHTTT--GQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 78
Query: 334 LSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVH 393
+ D +V+E+ N L ++ + + E + SA+EY H
Sbjct: 79 YDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSE-QEARRFFQQIISAVEYCHRHK---- 132
Query: 394 IIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVS 453
I+H DLKP N+LLDE++ ++DFG+ ++ +G + + Y APE + G +
Sbjct: 133 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN---FLKTSCGSPNYAAPEV-ISGKLY 188
Query: 454 A--KCDVYSYGVLLMETFTRKRPTDE 477
A + DV+S GV+L R+ P D+
Sbjct: 189 AGPEVDVWSCGVILYVMLCRRLPFDD 214
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 95/204 (46%), Gaps = 11/204 (5%)
Query: 273 EFNECNLLGTSSFGSVYKGT-ISDGTDVAIKVFNLQLE-----RAFRSFDSECEVLRNVR 326
E + +LG+ FG+V+KG I +G + I V +E ++F++ + ++
Sbjct: 14 ELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLD 73
Query: 327 HRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLH 386
H +++++L + LV +++P GSL + H L LN + + + YL
Sbjct: 74 HAHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLE 132
Query: 387 NGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEY 446
H ++H +L N+LL V+DFG+ LL + + + I +MA E
Sbjct: 133 E-HG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALES 188
Query: 447 GLEGIVSAKCDVYSYGVLLMETFT 470
G + + DV+SYGV + E T
Sbjct: 189 IHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 20/206 (9%)
Query: 280 LGTSSFGSV---YKGTISDGTDVAIKVFN---LQLERAFRSFDSECEVLRNVRHRNLIKI 333
LG SFG V Y T G VA+K+ N L + E LR +RH ++IK+
Sbjct: 22 LGEGSFGKVKLAYHTTT--GQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 79
Query: 334 LSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVH 393
+ D +V+E+ N L ++ + + E + SA+EY H
Sbjct: 80 YDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSE-QEARRFFQQIISAVEYCHRHK---- 133
Query: 394 IIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVS 453
I+H DLKP N+LLDE++ ++DFG+ ++ +G + + Y APE + G +
Sbjct: 134 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN---FLKTSCGSPNYAAPEV-ISGKLY 189
Query: 454 A--KCDVYSYGVLLMETFTRKRPTDE 477
A + DV+S GV+L R+ P D+
Sbjct: 190 AGPEVDVWSCGVILYVMLCRRLPFDD 215
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 20/206 (9%)
Query: 280 LGTSSFGSV---YKGTISDGTDVAIKVFN---LQLERAFRSFDSECEVLRNVRHRNLIKI 333
LG SFG V Y T G VA+K+ N L + E LR +RH ++IK+
Sbjct: 12 LGEGSFGKVKLAYHTTT--GQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 69
Query: 334 LSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVH 393
+ D +V+E+ N L ++ + + E + SA+EY H
Sbjct: 70 YDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSE-QEARRFFQQIISAVEYCHRHK---- 123
Query: 394 IIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVS 453
I+H DLKP N+LLDE++ ++DFG+ ++ +G + + Y APE + G +
Sbjct: 124 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN---FLKTSCGSPNYAAPEV-ISGKLY 179
Query: 454 A--KCDVYSYGVLLMETFTRKRPTDE 477
A + DV+S GV+L R+ P D+
Sbjct: 180 AGPEVDVWSCGVILYVMLCRRLPFDD 205
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 100/223 (44%), Gaps = 21/223 (9%)
Query: 266 DIQRATDEFNECNLLGTSSFGSVYKGTI--SDGTDVAIKVFNLQLE----RAFRSFDSEC 319
D+ +F +LG FGSV + + DG+ V + V L+ + F E
Sbjct: 17 DVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREA 76
Query: 320 EVLRNVRHRNLIKILSSYSNPDFKA------LVLEFMPNGSLEKWLYSHN-----YFLDI 368
++ H ++ K++ K ++L FM +G L +L + + L +
Sbjct: 77 ACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPL 136
Query: 369 LERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGED 428
+ M+D+ +EYL SS + IH DL N +L E+M V+DFG+ + + G+
Sbjct: 137 QTLVRFMVDIACGMEYL----SSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDY 192
Query: 429 SVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTR 471
+ + + ++A E + + + DV+++GV + E TR
Sbjct: 193 YRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTR 235
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 96/208 (46%), Gaps = 12/208 (5%)
Query: 274 FNECNLLGTSSFGSVYKGTISDGTD--VAIKVFNLQLERAFRSF-DSECEVLRNVRHRNL 330
F + +G SFG V+KG I + T VAIK+ +L+ E VL +
Sbjct: 25 FTKLERIGKGSFGEVFKG-IDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYV 83
Query: 331 IKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHS 390
K SY +++E++ GS L + + D + ++ ++ L+YLH
Sbjct: 84 TKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPF--DEFQIATMLKEILKGLDYLH---- 137
Query: 391 SVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEG 450
S IH D+K N+LL E ++DFG+ L + + +++ + T +MAPE +
Sbjct: 138 SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ--IKRNTFVGTPFWMAPEVIQQS 195
Query: 451 IVSAKCDVYSYGVLLMETFTRKRPTDEM 478
+K D++S G+ +E + P +M
Sbjct: 196 AYDSKADIWSLGITAIELAKGEPPNSDM 223
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 95/204 (46%), Gaps = 11/204 (5%)
Query: 273 EFNECNLLGTSSFGSVYKGT-ISDGTDVAIKVFNLQLE-----RAFRSFDSECEVLRNVR 326
E + +LG+ FG+V+KG I +G + I V +E ++F++ + ++
Sbjct: 32 ELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLD 91
Query: 327 HRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLH 386
H +++++L + LV +++P GSL + H L LN + + + YL
Sbjct: 92 HAHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLE 150
Query: 387 NGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEY 446
H ++H +L N+LL V+DFG+ LL + + + I +MA E
Sbjct: 151 E-HG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALES 206
Query: 447 GLEGIVSAKCDVYSYGVLLMETFT 470
G + + DV+SYGV + E T
Sbjct: 207 IHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 97/207 (46%), Gaps = 20/207 (9%)
Query: 280 LGTSSFGSVY----KGTISDG--TDVAIKVFNLQLERAFR-SFDSECEVLRNVRHRNLIK 332
LG SFG VY KG + D T VAIK N R F +E V++ ++++
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 77
Query: 333 ILSSYSNPDFKALVLEFMPNGSLEKWLYS------HNYFL---DILERLNIMIDVGSALE 383
+L S +++E M G L+ +L S +N L + + + + ++ +
Sbjct: 78 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 137
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
YL+ + +H DL N ++ E+ + DFG+ + + E + + + + +M+
Sbjct: 138 YLN----ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMS 193
Query: 444 PEYGLEGIVSAKCDVYSYGVLLMETFT 470
PE +G+ + DV+S+GV+L E T
Sbjct: 194 PESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 92/204 (45%), Gaps = 11/204 (5%)
Query: 273 EFNECNLLGTSSFGSVYKGT-ISDGTDV----AIKVFNLQLE-RAFRSFDSECEVLRNVR 326
E + +LG+ +FG+VYKG I DG +V AIKV +A + E V+ V
Sbjct: 18 ELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVG 77
Query: 327 HRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLH 386
+ ++L + LV + MP G L + + L + LN + + + YL
Sbjct: 78 SPYVSRLLGICLTSTVQ-LVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLE 136
Query: 387 NGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEY 446
+ V ++H DL N+L+ ++DFG+ +LL E I +MA E
Sbjct: 137 D----VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALES 192
Query: 447 GLEGIVSAKCDVYSYGVLLMETFT 470
L + + DV+SYGV + E T
Sbjct: 193 ILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 90/208 (43%), Gaps = 18/208 (8%)
Query: 274 FNECNLLGTSSFGSVY-KGTISDGTDVAIKVFNL---QLERAFRSFDSECEVLRNVRHRN 329
F++ +G SFG+VY + + VAIK + Q ++ E L+ +RH N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 330 LIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGH 389
I+ Y LV+E+ GS L H L +E + L YLH
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH--- 132
Query: 390 SSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGL- 448
S ++IH D+K NILL E + + DFG ++ V T +MAPE L
Sbjct: 133 -SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV------GTPYWMAPEVILA 185
Query: 449 --EGIVSAKCDVYSYGVLLMETFTRKRP 474
EG K DV+S G+ +E RK P
Sbjct: 186 MDEGQYDGKVDVWSLGITCIELAERKPP 213
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 97/207 (46%), Gaps = 20/207 (9%)
Query: 280 LGTSSFGSVY----KGTISDG--TDVAIKVFNLQLERAFR-SFDSECEVLRNVRHRNLIK 332
LG SFG VY KG + D T VAIK N R F +E V++ ++++
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 333 ILSSYSNPDFKALVLEFMPNGSLEKWLYS------HNYFL---DILERLNIMIDVGSALE 383
+L S +++E M G L+ +L S +N L + + + + ++ +
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
YL+ + +H DL N ++ E+ + DFG+ + + E + + + + +M+
Sbjct: 147 YLN----ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMS 202
Query: 444 PEYGLEGIVSAKCDVYSYGVLLMETFT 470
PE +G+ + DV+S+GV+L E T
Sbjct: 203 PESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 14/200 (7%)
Query: 272 DEFNECNLLGTSSFGSVY-KGTISDGTDVAIKVFNLQLERAFRSFD---SECEVLRNVRH 327
D+F LGT SFG V + G A+K+ + Q + + +E +L+ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
L+K+ S+ + +V+E++P G + L F + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 158
Query: 388 GHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYG 447
S+ +I+ DLKP N+L+D+ V+DFG K + R T Y+APE
Sbjct: 159 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEII 210
Query: 448 LEGIVSAKCDVYSYGVLLME 467
L + D ++ GVL+ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 14/200 (7%)
Query: 272 DEFNECNLLGTSSFGSVY-KGTISDGTDVAIKVFNLQLERAFRSFD---SECEVLRNVRH 327
D+F LGT SFG V + G A+K+ + Q + + +E +L+ V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
L+K+ S+ + +V+E++P G + L F + R + EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 159
Query: 388 GHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYG 447
S+ +I+ DLKP N+L+D+ V+DFG K + R T Y+APE
Sbjct: 160 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEII 211
Query: 448 LEGIVSAKCDVYSYGVLLME 467
L + D ++ GVL+ E
Sbjct: 212 LSKGYNKAVDWWALGVLIYE 231
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 14/200 (7%)
Query: 272 DEFNECNLLGTSSFGSVY-KGTISDGTDVAIKVFNLQLERAFRSFD---SECEVLRNVRH 327
D+F LGT SFG V + G A+K+ + Q + + +E +L+ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
L+K+ S+ + +V+E++P G + L F + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 158
Query: 388 GHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYG 447
S+ +I+ DLKP N+L+D+ V+DFG K + R T Y+APE
Sbjct: 159 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEII 210
Query: 448 LEGIVSAKCDVYSYGVLLME 467
L + D ++ GVL+ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 101/216 (46%), Gaps = 29/216 (13%)
Query: 280 LGTSSFGSVY--------KGTISDGTDVAIKVF-NLQLERAFRSFDSECEVLRNV-RHRN 329
LG +FG V K + VA+K+ + E+ SE E+++ + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 330 LIKILSSYSNPDFKALVLEFMPNGSLEKWLYSH-----NYFLDI----------LERLNI 374
+I +L + + +++ + G+L ++L + Y DI + ++
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 375 MIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTM 434
+ +EYL +S IH DL N+L+ EN V ++DFG+ + + + + T
Sbjct: 163 TYQLARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 435 TMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
+ +MAPE + + + + DV+S+GVL+ E FT
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 92/203 (45%), Gaps = 20/203 (9%)
Query: 272 DEFNECNLLGTSSFGSV----YKGTISDGTDVAIKVFNLQLERAFRSFD---SECEVLRN 324
D+F LGT SFG V +K T G A+K+ + Q + + +E +L+
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKET---GNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 90
Query: 325 VRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEY 384
V L+K+ S+ + +V+E++P G + L F + R + EY
Sbjct: 91 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEY 149
Query: 385 LHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAP 444
LH S+ +I+ DLKP N+L+D+ V+DFG K + R T Y+AP
Sbjct: 150 LH----SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAP 200
Query: 445 EYGLEGIVSAKCDVYSYGVLLME 467
E L + D ++ GVL+ E
Sbjct: 201 EIILSKGYNKAVDWWALGVLIYE 223
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 14/200 (7%)
Query: 272 DEFNECNLLGTSSFGSVY-KGTISDGTDVAIKVFNLQLERAFRSFD---SECEVLRNVRH 327
D+F +GT SFG V + G A+K+ + Q + + +E +L+ V
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
L+K+ S+ + +V+E+MP G + L F + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 388 GHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYG 447
S+ +I+ DLKP N+L+D+ V+DFG K + R T Y+APE
Sbjct: 159 ---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV-----KGRTWXLCGTPEYLAPEII 210
Query: 448 LEGIVSAKCDVYSYGVLLME 467
L + D ++ GVL+ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 92/203 (45%), Gaps = 20/203 (9%)
Query: 272 DEFNECNLLGTSSFGSV----YKGTISDGTDVAIKVFNLQLERAFRSFD---SECEVLRN 324
D+F LGT SFG V +K T G A+K+ + Q + + +E +L+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKET---GNHFAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 325 VRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEY 384
V L+K+ S+ + +V+E++P G + L F + R + EY
Sbjct: 98 VNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 385 LHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAP 444
LH S+ +I+ DLKP N+L+D+ V+DFG K + R T Y+AP
Sbjct: 157 LH----SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAP 207
Query: 445 EYGLEGIVSAKCDVYSYGVLLME 467
E L + D ++ GVL+ E
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYE 230
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 14/200 (7%)
Query: 272 DEFNECNLLGTSSFGSVY-KGTISDGTDVAIKVFNLQLERAFRSFD---SECEVLRNVRH 327
D+F +GT SFG V + G A+K+ + Q + + +E +L+ V
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
L+K+ S+ + +V+E+MP G + L F + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 388 GHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYG 447
S+ +I+ DLKP N+L+D+ V+DFG K + R T Y+APE
Sbjct: 159 ---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV-----KGRTWXLCGTPEYLAPEII 210
Query: 448 LEGIVSAKCDVYSYGVLLME 467
L + D ++ GVL+ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 92/203 (45%), Gaps = 20/203 (9%)
Query: 272 DEFNECNLLGTSSFGSV----YKGTISDGTDVAIKVFNLQLERAFRSFD---SECEVLRN 324
D+F LGT SFG V +K T G A+K+ + Q + + +E +L+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKET---GNHFAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 325 VRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEY 384
V L+K+ S+ + +V+E++P G + L F + R + EY
Sbjct: 98 VNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 385 LHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAP 444
LH S+ +I+ DLKP N+L+D+ V+DFG K + R T Y+AP
Sbjct: 157 LH----SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAP 207
Query: 445 EYGLEGIVSAKCDVYSYGVLLME 467
E L + D ++ GVL+ E
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYE 230
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 92/203 (45%), Gaps = 20/203 (9%)
Query: 272 DEFNECNLLGTSSFGSV----YKGTISDGTDVAIKVFNLQLERAFRSFD---SECEVLRN 324
D+F LGT SFG V +K T G A+K+ + Q + + +E +L+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKET---GNHFAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 325 VRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEY 384
V L+K+ S+ + +V+E++P G + L F + R + EY
Sbjct: 98 VNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 385 LHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAP 444
LH S+ +I+ DLKP N+L+D+ V+DFG K + R T Y+AP
Sbjct: 157 LH----SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAP 207
Query: 445 EYGLEGIVSAKCDVYSYGVLLME 467
E L + D ++ GVL+ E
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYE 230
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 105/240 (43%), Gaps = 20/240 (8%)
Query: 272 DEFNECNLLGTSSFGSVYKGTISDGT-DVAIKV-FNLQLER--AFRSFDSECEVLRNVRH 327
D+F LG FG+VY VA+KV F Q+E+ E E+ ++ H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
N++++ + + + L+LE+ P G L K L F D IM ++ AL Y H
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTF-DEQRTATIMEELADALMYCHG 141
Query: 388 GHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYG 447
+IH D+KP N+LL ++DFG S+R+ T+ Y+ PE
Sbjct: 142 K----KVIHRDIKPENLLLGLKGELKIADFG----WSVHAPSLRRKTMCGTLDYLPPEMI 193
Query: 448 LEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVK------ESLPHGLTEVV 501
+ + K D++ GVL E P + E + RR VK S+P G +++
Sbjct: 194 EGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNE-TYRRIVKVDLKFPASVPTGAQDLI 252
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 92/203 (45%), Gaps = 20/203 (9%)
Query: 272 DEFNECNLLGTSSFGSV----YKGTISDGTDVAIKVFNLQLERAFRSFD---SECEVLRN 324
D+F LGT SFG V +K T G A+K+ + Q + + +E +L+
Sbjct: 62 DQFERIKTLGTGSFGRVMLVKHKET---GNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 118
Query: 325 VRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEY 384
V L+K+ S+ + +V+E++P G + L F + R + EY
Sbjct: 119 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEY 177
Query: 385 LHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAP 444
LH S+ +I+ DLKP N+L+D+ V+DFG K + R T Y+AP
Sbjct: 178 LH----SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAP 228
Query: 445 EYGLEGIVSAKCDVYSYGVLLME 467
E L + D ++ GVL+ E
Sbjct: 229 EIILSKGYNKAVDWWALGVLIYE 251
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 101/216 (46%), Gaps = 29/216 (13%)
Query: 280 LGTSSFGSVY--------KGTISDGTDVAIKVF-NLQLERAFRSFDSECEVLRNV-RHRN 329
LG +FG V K + VA+K+ + E+ SE E+++ + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 330 LIKILSSYSNPDFKALVLEFMPNGSLEKWLYSH-----NYFLDI----------LERLNI 374
+I +L + + +++ + G+L ++L + Y DI + ++
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 375 MIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTM 434
+ +EYL +S IH DL N+L+ EN V ++DFG+ + + + + T
Sbjct: 163 TYQLARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 435 TMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
+ +MAPE + + + + DV+S+GVL+ E FT
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 280 LGTSSFGSVYKGTISD------GTDVAIKVFNLQLE-RAFRSFDSECEVLRNVRHRNLIK 332
LG SFG VY+G D T VA+K N R F +E V++ ++++
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 333 ILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLD---------ILERLNIMIDVGSALE 383
+L S +V+E M +G L+ +L S + + E + + ++ +
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
YL+ + +H DL N ++ + + DFG+ + + E + + + + +MA
Sbjct: 144 YLN----AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 199
Query: 444 PEYGLEGIVSAKCDVYSYGVLLME 467
PE +G+ + D++S+GV+L E
Sbjct: 200 PESLKDGVFTTSSDMWSFGVVLWE 223
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 101/230 (43%), Gaps = 45/230 (19%)
Query: 272 DEFNECNLLGTSSFGSVYKGTISDGTD-VAIKVFNLQLERAFRSFDS---ECEVLRNVRH 327
D++ ++G+ + V + + VAIK NL E+ S D E + + H
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINL--EKCQTSMDELLKEIQAMSQCHH 67
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERL--------------- 372
N++ +S+ D LV++ + GS+ LDI++ +
Sbjct: 68 PNIVSYYTSFVVKDELWLVMKLLSGGSV----------LDIIKHIVAKGEHKSGVLDEST 117
Query: 373 --NIMIDVGSALEYLH-NGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDS 429
I+ +V LEYLH NG IH D+K NILL E+ ++DFG+ L G D
Sbjct: 118 IATILREVLEGLEYLHKNGQ-----IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDI 172
Query: 430 VRQTMTMATIG---YMAPEYGLEGI--VSAKCDVYSYGVLLMETFTRKRP 474
R + +G +MAPE +E + K D++S+G+ +E T P
Sbjct: 173 TRNKVRKTFVGTPCWMAPEV-MEQVRGYDFKADIWSFGITAIELATGAAP 221
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 14/200 (7%)
Query: 272 DEFNECNLLGTSSFGSVY-KGTISDGTDVAIKVFNLQLERAFRSFD---SECEVLRNVRH 327
D+F LGT SFG V + G A+K+ + Q + + +E +L+ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
L+K+ S+ + +V+E++P G + L F + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 388 GHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYG 447
S+ +I+ DLKP N+L+D+ V+DFG K + R T Y+APE
Sbjct: 159 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEII 210
Query: 448 LEGIVSAKCDVYSYGVLLME 467
L + D ++ GVL+ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 14/200 (7%)
Query: 272 DEFNECNLLGTSSFGSVY-KGTISDGTDVAIKVFNLQLERAFRSFD---SECEVLRNVRH 327
D+F LGT SFG V + G A+K+ + Q + + +E +L+ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
L+K+ S+ + +V+E++P G + L F + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 388 GHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYG 447
S+ +I+ DLKP N+L+D+ V+DFG K + R T Y+APE
Sbjct: 159 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEII 210
Query: 448 LEGIVSAKCDVYSYGVLLME 467
L + D ++ GVL+ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 14/200 (7%)
Query: 272 DEFNECNLLGTSSFGSVY-KGTISDGTDVAIKVFNLQLERAFRSFD---SECEVLRNVRH 327
D+F LGT SFG V + G A+K+ + Q + + +E +L+ V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
L+K+ S+ + +V+E++P G + L F + R + EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 388 GHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYG 447
S+ +I+ DLKP N+L+D+ V+DFG K + R T Y+APE
Sbjct: 160 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEII 211
Query: 448 LEGIVSAKCDVYSYGVLLME 467
L + D ++ GVL+ E
Sbjct: 212 LSKGYNKAVDWWALGVLIYE 231
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 14/200 (7%)
Query: 272 DEFNECNLLGTSSFGSVY-KGTISDGTDVAIKVFNLQLERAFRSFD---SECEVLRNVRH 327
D+F LGT SFG V + G A+K+ + Q + + +E +L+ V
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 86
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
L+K+ S+ + +V+E++P G + L F + R + EYLH
Sbjct: 87 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 144
Query: 388 GHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYG 447
S+ +I+ DLKP N+L+D+ V+DFG K + R T Y+APE
Sbjct: 145 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWTLCGTPEYLAPEII 196
Query: 448 LEGIVSAKCDVYSYGVLLME 467
L + D ++ GVL+ E
Sbjct: 197 LSKGYNKAVDWWALGVLIYE 216
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 92/203 (45%), Gaps = 20/203 (9%)
Query: 272 DEFNECNLLGTSSFGSV----YKGTISDGTDVAIKVFNLQLERAFRSFD---SECEVLRN 324
D+F LGT SFG V +K T G A+K+ + Q + + +E +L+
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKET---GNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 90
Query: 325 VRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEY 384
V L+K+ S+ + +V+E++P G + L F + R + EY
Sbjct: 91 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEY 149
Query: 385 LHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAP 444
LH S+ +I+ DLKP N+L+D+ V+DFG K + R T Y+AP
Sbjct: 150 LH----SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAP 200
Query: 445 EYGLEGIVSAKCDVYSYGVLLME 467
E L + D ++ GVL+ E
Sbjct: 201 EIILSKGYNKAVDWWALGVLIYE 223
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 14/200 (7%)
Query: 272 DEFNECNLLGTSSFGSVY-KGTISDGTDVAIKVFNLQLERAFRSFD---SECEVLRNVRH 327
D+F LGT SFG V + G A+K+ + Q + + +E +L+ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
L+K+ S+ + +V+E++P G + L F + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 388 GHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYG 447
S+ +I+ DLKP N+L+D+ V+DFG K + R T Y+APE
Sbjct: 159 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEII 210
Query: 448 LEGIVSAKCDVYSYGVLLME 467
L + D ++ GVL+ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 280 LGTSSFGSVYKGTISD------GTDVAIKVFNLQLE-RAFRSFDSECEVLRNVRHRNLIK 332
LG SFG VY+G D T VA+K N R F +E V++ ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 333 ILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLD---------ILERLNIMIDVGSALE 383
+L S +V+E M +G L+ +L S + + E + + ++ +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
YL+ + +H DL N ++ + + DFG+ + + E + + + + +MA
Sbjct: 145 YLN----AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 200
Query: 444 PEYGLEGIVSAKCDVYSYGVLLME 467
PE +G+ + D++S+GV+L E
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWE 224
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 92/203 (45%), Gaps = 20/203 (9%)
Query: 272 DEFNECNLLGTSSFGSV----YKGTISDGTDVAIKVFNLQLERAFRSFD---SECEVLRN 324
D+F LGT SFG V +K T G A+K+ + Q + + +E +L+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKET---GNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 325 VRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEY 384
V L+K+ S+ + +V+E++P G + L F + R + EY
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEY 157
Query: 385 LHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAP 444
LH S+ +I+ DLKP N+L+D+ V+DFG K + R T Y+AP
Sbjct: 158 LH----SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAP 208
Query: 445 EYGLEGIVSAKCDVYSYGVLLME 467
E L + D ++ GVL+ E
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYE 231
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 14/200 (7%)
Query: 272 DEFNECNLLGTSSFGSVY-KGTISDGTDVAIKVFNLQLERAFRSFD---SECEVLRNVRH 327
D+F LGT SFG V + G A+K+ + Q + + +E +L+ V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
L+K+ S+ + +V+E++P G + L F + R + EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 388 GHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYG 447
S+ +I+ DLKP N+L+D+ V+DFG K + R T Y+APE
Sbjct: 160 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWTLCGTPEYLAPEII 211
Query: 448 LEGIVSAKCDVYSYGVLLME 467
L + D ++ GVL+ E
Sbjct: 212 LSKGYNKAVDWWALGVLIYE 231
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 92/203 (45%), Gaps = 20/203 (9%)
Query: 272 DEFNECNLLGTSSFGSV----YKGTISDGTDVAIKVFNLQLERAFRSFD---SECEVLRN 324
D+F LGT SFG V +K T G A+K+ + Q + + +E +L+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKET---GNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 325 VRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEY 384
V L+K+ S+ + +V+E++P G + L F + R + EY
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEY 157
Query: 385 LHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAP 444
LH S+ +I+ DLKP N+L+D+ V+DFG K + R T Y+AP
Sbjct: 158 LH----SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAP 208
Query: 445 EYGLEGIVSAKCDVYSYGVLLME 467
E L + D ++ GVL+ E
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYE 231
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 101/230 (43%), Gaps = 45/230 (19%)
Query: 272 DEFNECNLLGTSSFGSVYKGTISDGTD-VAIKVFNLQLERAFRSFDS---ECEVLRNVRH 327
D++ ++G+ + V + + VAIK NL E+ S D E + + H
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINL--EKCQTSMDELLKEIQAMSQCHH 72
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERL--------------- 372
N++ +S+ D LV++ + GS+ LDI++ +
Sbjct: 73 PNIVSYYTSFVVKDELWLVMKLLSGGSV----------LDIIKHIVAKGEHKSGVLDEST 122
Query: 373 --NIMIDVGSALEYLH-NGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDS 429
I+ +V LEYLH NG IH D+K NILL E+ ++DFG+ L G D
Sbjct: 123 IATILREVLEGLEYLHKNGQ-----IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDI 177
Query: 430 VRQTMTMATIG---YMAPEYGLEGI--VSAKCDVYSYGVLLMETFTRKRP 474
R + +G +MAPE +E + K D++S+G+ +E T P
Sbjct: 178 TRNKVRKTFVGTPCWMAPEV-MEQVRGYDFKADIWSFGITAIELATGAAP 226
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 92/203 (45%), Gaps = 20/203 (9%)
Query: 272 DEFNECNLLGTSSFGSV----YKGTISDGTDVAIKVFNLQLERAFRSFD---SECEVLRN 324
D+F LGT SFG V +K T G A+K+ + Q + + +E +L+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKET---GNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 325 VRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEY 384
V L+K+ S+ + +V+E++P G + L F + R + EY
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEY 157
Query: 385 LHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAP 444
LH S+ +I+ DLKP N+L+D+ V+DFG K + R T Y+AP
Sbjct: 158 LH----SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAP 208
Query: 445 EYGLEGIVSAKCDVYSYGVLLME 467
E L + D ++ GVL+ E
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYE 231
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 103/211 (48%), Gaps = 18/211 (8%)
Query: 259 WRRTSYLDIQRATDEFNECNLLGTSSFGSVYKGTISDGTD-VAIK-VFNLQLERAFRSFD 316
W++ DI+ D ++ ++LGT +F V VAIK + LE S +
Sbjct: 10 WKQAE--DIR---DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSME 64
Query: 317 SECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 376
+E VL ++H N++ + Y + L+++ + G L + ++ + + ++
Sbjct: 65 NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTE-RDASRLIF 123
Query: 377 DVGSALEYLHNGHSSVHIIHCDLKPTNIL---LDENMVAHVSDFGIYKLLGEGEDSVRQT 433
V A++YLH+ + I+H DLKP N+L LDE+ +SDFG+ K+ G SV T
Sbjct: 124 QVLDAVKYLHD----LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG--SVLST 177
Query: 434 MTMATIGYMAPEYGLEGIVSAKCDVYSYGVL 464
T GY+APE + S D +S GV+
Sbjct: 178 -ACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 96/208 (46%), Gaps = 12/208 (5%)
Query: 274 FNECNLLGTSSFGSVYKGTISDGTD--VAIKVFNLQLERAFRSF-DSECEVLRNVRHRNL 330
F + +G SFG V+KG I + T VAIK+ +L+ E VL +
Sbjct: 24 FTKLEKIGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 82
Query: 331 IKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHS 390
K SY +++E++ GS L LD + I+ ++ L+YLH
Sbjct: 83 TKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLH---- 136
Query: 391 SVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEG 450
S IH D+K N+LL E+ ++DFG+ L + + +++ + T +MAPE +
Sbjct: 137 SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ--IKRNXFVGTPFWMAPEVIKQS 194
Query: 451 IVSAKCDVYSYGVLLMETFTRKRPTDEM 478
+K D++S G+ +E + P E+
Sbjct: 195 AYDSKADIWSLGITAIELARGEPPHSEL 222
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 96/208 (46%), Gaps = 12/208 (5%)
Query: 274 FNECNLLGTSSFGSVYKGTISDGTD--VAIKVFNLQLERAFRSF-DSECEVLRNVRHRNL 330
F + +G SFG V+KG I + T VAIK+ +L+ E VL +
Sbjct: 29 FTKLEKIGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 87
Query: 331 IKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHS 390
K SY +++E++ GS L LD + I+ ++ L+YLH
Sbjct: 88 TKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLH---- 141
Query: 391 SVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEG 450
S IH D+K N+LL E+ ++DFG+ L + + +++ + T +MAPE +
Sbjct: 142 SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ--IKRNTFVGTPFWMAPEVIKQS 199
Query: 451 IVSAKCDVYSYGVLLMETFTRKRPTDEM 478
+K D++S G+ +E + P E+
Sbjct: 200 AYDSKADIWSLGITAIELARGEPPHSEL 227
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 101/204 (49%), Gaps = 30/204 (14%)
Query: 278 NLLGTSSFGS-VYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNV-RHRNLIKILS 335
++LG + G+ VY+G D DVA+K L F D E ++LR H N+I+
Sbjct: 30 DVLGHGAEGTIVYRGMF-DNRDVAVKRI---LPECFSFADREVQLLRESDEHPNVIRYFC 85
Query: 336 SYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHII 395
+ + F+ + +E +L++++ ++ LE + ++ S L +LH S++I+
Sbjct: 86 TEKDRQFQYIAIELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH----SLNIV 140
Query: 396 HCDLKPTNILLD-----ENMVAHVSDFGIYKLLGEGEDSV-RQTMTMATIGYMAPEYGLE 449
H DLKP NIL+ + A +SDFG+ K L G S R++ T G++APE
Sbjct: 141 HRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPE---- 196
Query: 450 GIVSAKC--------DVYSYGVLL 465
++S C D++S G +
Sbjct: 197 -MLSEDCKENPTYTVDIFSAGCVF 219
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 96/208 (46%), Gaps = 12/208 (5%)
Query: 274 FNECNLLGTSSFGSVYKGTISDGTD--VAIKVFNLQLERAFRSF-DSECEVLRNVRHRNL 330
F + +G SFG V+KG I + T VAIK+ +L+ E VL +
Sbjct: 9 FTKLEKIGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 67
Query: 331 IKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHS 390
K SY +++E++ GS L LD + I+ ++ L+YLH
Sbjct: 68 TKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLH---- 121
Query: 391 SVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEG 450
S IH D+K N+LL E+ ++DFG+ L + + +++ + T +MAPE +
Sbjct: 122 SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ--IKRNTFVGTPFWMAPEVIKQS 179
Query: 451 IVSAKCDVYSYGVLLMETFTRKRPTDEM 478
+K D++S G+ +E + P E+
Sbjct: 180 AYDSKADIWSLGITAIELARGEPPHSEL 207
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 96/208 (46%), Gaps = 12/208 (5%)
Query: 274 FNECNLLGTSSFGSVYKGTISDGTD--VAIKVFNLQLERAFRSF-DSECEVLRNVRHRNL 330
F + +G SFG V+KG I + T VAIK+ +L+ E VL +
Sbjct: 9 FTKLEKIGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 67
Query: 331 IKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHS 390
K SY +++E++ GS L LD + I+ ++ L+YLH
Sbjct: 68 TKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLH---- 121
Query: 391 SVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEG 450
S IH D+K N+LL E+ ++DFG+ L + + +++ + T +MAPE +
Sbjct: 122 SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ--IKRNXFVGTPFWMAPEVIKQS 179
Query: 451 IVSAKCDVYSYGVLLMETFTRKRPTDEM 478
+K D++S G+ +E + P E+
Sbjct: 180 AYDSKADIWSLGITAIELARGEPPHSEL 207
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 90/200 (45%), Gaps = 14/200 (7%)
Query: 272 DEFNECNLLGTSSFGSVY-KGTISDGTDVAIKVFNLQLERAFRSFD---SECEVLRNVRH 327
D+F LGT SFG V + G A+K+ + Q + + +E +L+ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
L+K+ S+ + +V+E+ P G + L F + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 388 GHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYG 447
S+ +I+ DLKP N+++D+ V+DFG+ K + R T Y+APE
Sbjct: 159 ---SLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRV-----KGRTWXLCGTPEYLAPEII 210
Query: 448 LEGIVSAKCDVYSYGVLLME 467
L + D ++ GVL+ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 97/227 (42%), Gaps = 34/227 (14%)
Query: 269 RATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLERAFRSFDSECEVLRNVRH 327
R +F E +LG +FG V K + D AIK E + SE +L ++ H
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASLNH 61
Query: 328 -------------RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 374
RN +K +++ + +E+ NG+L ++S N E +
Sbjct: 62 QYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRL 121
Query: 375 MIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVR--- 431
+ AL Y+H S IIH DLKP NI +DE+ + DFG+ K + D ++
Sbjct: 122 FRQILEALSYIH----SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS 177
Query: 432 ---------QTMTMATIGYMAPEYGLEGI--VSAKCDVYSYGVLLME 467
T + T Y+A E L+G + K D+YS G++ E
Sbjct: 178 QNLPGSSDNLTSAIGTAMYVATEV-LDGTGHYNEKIDMYSLGIIFFE 223
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 117/242 (48%), Gaps = 25/242 (10%)
Query: 280 LGTSSFGSVYKGTISD-GTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYS 338
+G S G V T G VA+K +L+ ++ +E ++R+ H N++ + SSY
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 339 NPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCD 398
D +V+EF+ G+L + +H ++ + + + V AL YLHN +IH D
Sbjct: 113 VGDELWVVMEFLEGGALTD-IVTHTR-MNEEQIATVCLSVLRALSYLHNQ----GVIHRD 166
Query: 399 LKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDV 458
+K +ILL + +SDFG + ++ ++ + T +MAPE + D+
Sbjct: 167 IKSDSILLTSDGRIKLSDFGFCAQV--SKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDI 224
Query: 459 YSYGVLLMETFTRKRPTDEMFIGEMSLR--RWVKESLP------HGLTEV----VDANLV 506
+S G++++E + P + E L+ R +++SLP H ++ V +D LV
Sbjct: 225 WSLGIMVIEMIDGEPP----YFNEPPLQAMRRIRDSLPPRVKDLHKVSSVLRGFLDLMLV 280
Query: 507 RE 508
RE
Sbjct: 281 RE 282
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 103/211 (48%), Gaps = 18/211 (8%)
Query: 259 WRRTSYLDIQRATDEFNECNLLGTSSFGSVYKGTISDGTD-VAIK-VFNLQLERAFRSFD 316
W++ DI+ D ++ ++LGT +F V VAIK + LE S +
Sbjct: 10 WKQAE--DIR---DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSME 64
Query: 317 SECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 376
+E VL ++H N++ + Y + L+++ + G L + ++ + + ++
Sbjct: 65 NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTE-RDASRLIF 123
Query: 377 DVGSALEYLHNGHSSVHIIHCDLKPTNIL---LDENMVAHVSDFGIYKLLGEGEDSVRQT 433
V A++YLH+ + I+H DLKP N+L LDE+ +SDFG+ K+ G SV T
Sbjct: 124 QVLDAVKYLHD----LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG--SVLST 177
Query: 434 MTMATIGYMAPEYGLEGIVSAKCDVYSYGVL 464
T GY+APE + S D +S GV+
Sbjct: 178 -ACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 92/204 (45%), Gaps = 20/204 (9%)
Query: 280 LGTSSFGSVYKGTISD------GTDVAIKVFNLQLE-RAFRSFDSECEVLRNVRHRNLIK 332
LG SFG VY+G D T VA+K N R F +E V++ ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 333 ILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLD---------ILERLNIMIDVGSALE 383
+L S +V+E M +G L+ +L S + + E + + ++ +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
YL+ + +H DL N ++ + + DFG+ + + E + + + +MA
Sbjct: 145 YLN----AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMA 200
Query: 444 PEYGLEGIVSAKCDVYSYGVLLME 467
PE +G+ + D++S+GV+L E
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWE 224
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 93/203 (45%), Gaps = 11/203 (5%)
Query: 274 FNECNLLGTSSFGSVYKGTISD-GTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIK 332
F+ LG S+GSVYK + G VAIK + +E + E +++ +++K
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIK--QVPVESDLQEIIKEISIMQQCDSPHVVK 88
Query: 333 ILSSY-SNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSS 391
SY N D +V+E+ GS+ + N L E I+ LEYLH
Sbjct: 89 YYGSYFKNTDL-WIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLH----F 143
Query: 392 VHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGI 451
+ IH D+K NILL+ A ++DFG+ L + ++ + T +MAPE E
Sbjct: 144 MRKIHRDIKAGNILLNTEGHAKLADFGVAGQL--TDXMAKRNXVIGTPFWMAPEVIQEIG 201
Query: 452 VSAKCDVYSYGVLLMETFTRKRP 474
+ D++S G+ +E K P
Sbjct: 202 YNCVADIWSLGITAIEMAEGKPP 224
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 103/211 (48%), Gaps = 18/211 (8%)
Query: 259 WRRTSYLDIQRATDEFNECNLLGTSSFGSVYKGTISDGTD-VAIK-VFNLQLERAFRSFD 316
W++ DI+ D ++ ++LGT +F V VAIK + LE S +
Sbjct: 10 WKQAE--DIR---DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSME 64
Query: 317 SECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 376
+E VL ++H N++ + Y + L+++ + G L + ++ + + ++
Sbjct: 65 NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTE-RDASRLIF 123
Query: 377 DVGSALEYLHNGHSSVHIIHCDLKPTNIL---LDENMVAHVSDFGIYKLLGEGEDSVRQT 433
V A++YLH+ + I+H DLKP N+L LDE+ +SDFG+ K+ G SV T
Sbjct: 124 QVLDAVKYLHD----LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG--SVLST 177
Query: 434 MTMATIGYMAPEYGLEGIVSAKCDVYSYGVL 464
T GY+APE + S D +S GV+
Sbjct: 178 -ACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 103/211 (48%), Gaps = 18/211 (8%)
Query: 259 WRRTSYLDIQRATDEFNECNLLGTSSFGSVYKGTISDGTD-VAIK-VFNLQLERAFRSFD 316
W++ DI+ D ++ ++LGT +F V VAIK + LE S +
Sbjct: 10 WKQAE--DIR---DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSME 64
Query: 317 SECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 376
+E VL ++H N++ + Y + L+++ + G L + ++ + + ++
Sbjct: 65 NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTE-RDASRLIF 123
Query: 377 DVGSALEYLHNGHSSVHIIHCDLKPTNIL---LDENMVAHVSDFGIYKLLGEGEDSVRQT 433
V A++YLH+ + I+H DLKP N+L LDE+ +SDFG+ K+ G SV T
Sbjct: 124 QVLDAVKYLHD----LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG--SVLST 177
Query: 434 MTMATIGYMAPEYGLEGIVSAKCDVYSYGVL 464
T GY+APE + S D +S GV+
Sbjct: 178 -ACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 89/200 (44%), Gaps = 14/200 (7%)
Query: 272 DEFNECNLLGTSSFGSVY-KGTISDGTDVAIKVFNLQLERAFRSFD---SECEVLRNVRH 327
D+F LGT SFG V + G A+K+ + Q + + +E +L+ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
L+K+ S+ + +V+E+ P G + L F + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 158
Query: 388 GHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYG 447
S+ +I+ DLKP N+++D+ V+DFG K + R T Y+APE
Sbjct: 159 ---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-----KGRTWXLCGTPEYLAPEII 210
Query: 448 LEGIVSAKCDVYSYGVLLME 467
L + D ++ GVL+ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 89/200 (44%), Gaps = 14/200 (7%)
Query: 272 DEFNECNLLGTSSFGSVY-KGTISDGTDVAIKVFNLQLERAFRSFD---SECEVLRNVRH 327
D+F LGT SFG V + G A+K+ + Q + + +E +L+ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
L+K+ S+ + +V+E+ P G + L F + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 388 GHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYG 447
S+ +I+ DLKP N+++D+ V+DFG K + R T Y+APE
Sbjct: 159 ---SLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEII 210
Query: 448 LEGIVSAKCDVYSYGVLLME 467
L + D ++ GVL+ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 90/200 (45%), Gaps = 14/200 (7%)
Query: 272 DEFNECNLLGTSSFGSVY-KGTISDGTDVAIKVFNLQLERAFRSFD---SECEVLRNVRH 327
D+F LGT SFG V + G A+K+ + Q + + +E +L+ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
L+K+ S+ + +V+E+ P G + L F + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 388 GHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYG 447
S+ +I+ DLKP N+++D+ V+DFG+ K + R T Y+APE
Sbjct: 159 ---SLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRV-----KGRTWXLCGTPEYLAPEII 210
Query: 448 LEGIVSAKCDVYSYGVLLME 467
L + D ++ GVL+ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 32/215 (14%)
Query: 280 LGTSSFGSVYKGT-ISDGTDVAIKVFNLQLERA---FRSFDSECEVLRNVRHRNLIKILS 335
LG SFG V T VA+K + QL + + E L+ +RH ++IK+
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 336 SYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGS--------ALEYLHN 387
+ P +V+E+ G L F I+E+ + D G A+EY H
Sbjct: 77 VITTPTDIVMVIEY-AGGEL---------FDYIVEKKRMTEDEGRRFFQQIICAIEYCHR 126
Query: 388 GHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYG 447
I+H DLKP N+LLD+N+ ++DFG+ ++ +G + +T + + Y APE
Sbjct: 127 HK----IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG--NFLKT-SCGSPNYAAPEV- 178
Query: 448 LEGIVSA--KCDVYSYGVLLMETFTRKRPTDEMFI 480
+ G + A + DV+S G++L + P D+ FI
Sbjct: 179 INGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFI 213
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 90/200 (45%), Gaps = 14/200 (7%)
Query: 272 DEFNECNLLGTSSFGSVY-KGTISDGTDVAIKVFNLQLERAFRSFD---SECEVLRNVRH 327
D+F +GT SFG V + G A+K+ + Q + + +E +L+ V
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
L+K+ S+ + +V+E++P G + L F + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 388 GHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYG 447
S+ +I+ DLKP N+L+D+ V+DFG K + R T Y+APE
Sbjct: 159 ---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV-----KGRTWXLCGTPEYLAPEII 210
Query: 448 LEGIVSAKCDVYSYGVLLME 467
L + D ++ GVL+ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 97/207 (46%), Gaps = 20/207 (9%)
Query: 280 LGTSSFGSVY----KGTISDG--TDVAIKVFNLQLERAFR-SFDSECEVLRNVRHRNLIK 332
LG SFG VY KG + D T VAIK N R F +E V++ ++++
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 82
Query: 333 ILSSYSNPDFKALVLEFMPNGSLEKWLYS------HNYFL---DILERLNIMIDVGSALE 383
+L S +++E M G L+ +L S +N L + + + + ++ +
Sbjct: 83 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 142
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
YL+ + +H DL N ++ E+ + DFG+ + + E + + + + +M+
Sbjct: 143 YLN----ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 198
Query: 444 PEYGLEGIVSAKCDVYSYGVLLMETFT 470
PE +G+ + DV+S+GV+L E T
Sbjct: 199 PESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 97/207 (46%), Gaps = 20/207 (9%)
Query: 280 LGTSSFGSVY----KGTISDG--TDVAIKVFNLQLERAFR-SFDSECEVLRNVRHRNLIK 332
LG SFG VY KG + D T VAIK N R F +E V++ ++++
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 333 ILSSYSNPDFKALVLEFMPNGSLEKWLYS------HNYFL---DILERLNIMIDVGSALE 383
+L S +++E M G L+ +L S +N L + + + + ++ +
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
YL+ + +H DL N ++ E+ + DFG+ + + E + + + + +M+
Sbjct: 140 YLN----ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 195
Query: 444 PEYGLEGIVSAKCDVYSYGVLLMETFT 470
PE +G+ + DV+S+GV+L E T
Sbjct: 196 PESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 90/193 (46%), Gaps = 10/193 (5%)
Query: 275 NECNLLGTSSFGSVYK-GTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKI 333
++ +LG FG V+K + G +A K+ + + +E V+ + H NLI++
Sbjct: 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQL 151
Query: 334 LSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVH 393
++ + + LV+E++ G L + +Y L L+ + M + + ++H ++
Sbjct: 152 YDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQ----MY 207
Query: 394 IIHCDLKPTNILLDENMVAHVS--DFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGI 451
I+H DLKP NIL + DFG+ + E + + T ++APE
Sbjct: 208 ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE---KLKVNFGTPEFLAPEVVNYDF 264
Query: 452 VSAKCDVYSYGVL 464
VS D++S GV+
Sbjct: 265 VSFPTDMWSVGVI 277
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 97/207 (46%), Gaps = 20/207 (9%)
Query: 280 LGTSSFGSVY----KGTISDG--TDVAIKVFNLQLERAFR-SFDSECEVLRNVRHRNLIK 332
LG SFG VY KG + D T VAIK N R F +E V++ ++++
Sbjct: 24 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 83
Query: 333 ILSSYSNPDFKALVLEFMPNGSLEKWLYS------HNYFL---DILERLNIMIDVGSALE 383
+L S +++E M G L+ +L S +N L + + + + ++ +
Sbjct: 84 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 143
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
YL+ + +H DL N ++ E+ + DFG+ + + E + + + + +M+
Sbjct: 144 YLN----ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 199
Query: 444 PEYGLEGIVSAKCDVYSYGVLLMETFT 470
PE +G+ + DV+S+GV+L E T
Sbjct: 200 PESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 97/207 (46%), Gaps = 20/207 (9%)
Query: 280 LGTSSFGSVY----KGTISDG--TDVAIKVFNLQLERAFR-SFDSECEVLRNVRHRNLIK 332
LG SFG VY KG + D T VAIK N R F +E V++ ++++
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 333 ILSSYSNPDFKALVLEFMPNGSLEKWLYS------HNYFL---DILERLNIMIDVGSALE 383
+L S +++E M G L+ +L S +N L + + + + ++ +
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
YL+ + +H DL N ++ E+ + DFG+ + + E + + + + +M+
Sbjct: 146 YLN----ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 201
Query: 444 PEYGLEGIVSAKCDVYSYGVLLMETFT 470
PE +G+ + DV+S+GV+L E T
Sbjct: 202 PESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 97/207 (46%), Gaps = 20/207 (9%)
Query: 280 LGTSSFGSVY----KGTISDG--TDVAIKVFNLQLERAFR-SFDSECEVLRNVRHRNLIK 332
LG SFG VY KG + D T VAIK N R F +E V++ ++++
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 333 ILSSYSNPDFKALVLEFMPNGSLEKWLYS------HNYFL---DILERLNIMIDVGSALE 383
+L S +++E M G L+ +L S +N L + + + + ++ +
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
YL+ + +H DL N ++ E+ + DFG+ + + E + + + + +M+
Sbjct: 147 YLN----ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 202
Query: 444 PEYGLEGIVSAKCDVYSYGVLLMETFT 470
PE +G+ + DV+S+GV+L E T
Sbjct: 203 PESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 92/190 (48%), Gaps = 11/190 (5%)
Query: 280 LGTSSFGSVYKGT-ISDGTDVAIKVFNLQ-LERAFRSFDSECEVLRNVRHRNLIKILSSY 337
+GT F V I G VAIK+ + L +E E L+N+RH+++ ++
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVL 77
Query: 338 SNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHC 397
+ +VLE+ P G L ++ S + + R+ + + SA+ Y+H S H
Sbjct: 78 ETANKIFMVLEYCPGGELFDYIISQDRLSEEETRV-VFRQIVSAVAYVH----SQGYAHR 132
Query: 398 DLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEG--IVSAK 455
DLKP N+L DE + DFG+ +D QT ++ Y APE ++G + ++
Sbjct: 133 DLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQT-CCGSLAYAAPEL-IQGKSYLGSE 190
Query: 456 CDVYSYGVLL 465
DV+S G+LL
Sbjct: 191 ADVWSMGILL 200
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 97/207 (46%), Gaps = 20/207 (9%)
Query: 280 LGTSSFGSVY----KGTISDG--TDVAIKVFNLQLERAFR-SFDSECEVLRNVRHRNLIK 332
LG SFG VY KG + D T VAIK N R F +E V++ ++++
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 333 ILSSYSNPDFKALVLEFMPNGSLEKWLYS------HNYFL---DILERLNIMIDVGSALE 383
+L S +++E M G L+ +L S +N L + + + + ++ +
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
YL+ + +H DL N ++ E+ + DFG+ + + E + + + + +M+
Sbjct: 153 YLN----ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 208
Query: 444 PEYGLEGIVSAKCDVYSYGVLLMETFT 470
PE +G+ + DV+S+GV+L E T
Sbjct: 209 PESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 96/207 (46%), Gaps = 20/207 (9%)
Query: 280 LGTSSFGSVY----KGTISDG--TDVAIKVFNLQLERAFR-SFDSECEVLRNVRHRNLIK 332
LG SFG VY KG + D T VAIK N R F +E V++ ++++
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 333 ILSSYSNPDFKALVLEFMPNGSLEKWLYS------HNYFL---DILERLNIMIDVGSALE 383
+L S +++E M G L+ +L S +N L + + + + ++ +
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
YL+ +H DL N ++ E+ + DFG+ + + E + + + + +M+
Sbjct: 146 YLNANK----FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 201
Query: 444 PEYGLEGIVSAKCDVYSYGVLLMETFT 470
PE +G+ + DV+S+GV+L E T
Sbjct: 202 PESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 89/200 (44%), Gaps = 14/200 (7%)
Query: 272 DEFNECNLLGTSSFGSVY-KGTISDGTDVAIKVFNLQLERAFRSFD---SECEVLRNVRH 327
D+F LGT SFG V + G A+K+ + Q + + +E +L+ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
L+K+ S+ + +V+E+ P G + L F + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 388 GHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYG 447
S+ +I+ DLKP N+++D+ V+DFG K + R T Y+APE
Sbjct: 159 ---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-----KGRTWXLCGTPEYLAPEII 210
Query: 448 LEGIVSAKCDVYSYGVLLME 467
L + D ++ GVL+ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 91/203 (44%), Gaps = 20/203 (9%)
Query: 272 DEFNECNLLGTSSFGSV----YKGTISDGTDVAIKVFNLQLERAFRSFD---SECEVLRN 324
D+F LGT SFG V +K T G A+K+ + Q + + +E +L+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKET---GNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 325 VRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEY 384
V L+K+ S+ + +V+E+ P G + L F + R + EY
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEY 157
Query: 385 LHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAP 444
LH S+ +I+ DLKP N+++D+ V+DFG K + R T Y+AP
Sbjct: 158 LH----SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-----KGRTWXLCGTPEYLAP 208
Query: 445 EYGLEGIVSAKCDVYSYGVLLME 467
E L + D ++ GVL+ E
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYE 231
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 95/207 (45%), Gaps = 20/207 (9%)
Query: 280 LGTSSFGSVY----KGTISDG--TDVAIKVFNLQLERAFR-SFDSECEVLRNVRHRNLIK 332
LG SFG VY KG + D T VAIK N R F +E V++ ++++
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 333 ILSSYSNPDFKALVLEFMPNGSLEKWLYS-----HNYFLDILERLNIMI----DVGSALE 383
+L S +++E M G L+ +L S N + L+ MI ++ +
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
YL+ +H DL N ++ E+ + DFG+ + + E + + + + +M+
Sbjct: 153 YLNANK----FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 208
Query: 444 PEYGLEGIVSAKCDVYSYGVLLMETFT 470
PE +G+ + DV+S+GV+L E T
Sbjct: 209 PESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 97/207 (46%), Gaps = 20/207 (9%)
Query: 280 LGTSSFGSVY----KGTISDG--TDVAIKVFNLQLERAFR-SFDSECEVLRNVRHRNLIK 332
LG SFG VY KG + D T VAIK N R F +E V++ ++++
Sbjct: 55 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 114
Query: 333 ILSSYSNPDFKALVLEFMPNGSLEKWLYS------HNYFL---DILERLNIMIDVGSALE 383
+L S +++E M G L+ +L S +N L + + + + ++ +
Sbjct: 115 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 174
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
YL+ + +H DL N ++ E+ + DFG+ + + E + + + + +M+
Sbjct: 175 YLN----ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 230
Query: 444 PEYGLEGIVSAKCDVYSYGVLLMETFT 470
PE +G+ + DV+S+GV+L E T
Sbjct: 231 PESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 97/221 (43%), Gaps = 18/221 (8%)
Query: 251 EDFLPLAIWRRTSYLDIQRATDEFNECNLLGTSSFGSVYKGTISD-GTDVAIKVFNLQLE 309
EDFL W S Q D+F+ LGT SFG V + G A+K+ + Q
Sbjct: 45 EDFL--KKWETPSQNTAQ--LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV 100
Query: 310 RAFRSFD---SECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFL 366
+ + +E +L+ V L+K+ S+ + +V+E++ G + L F
Sbjct: 101 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFX 160
Query: 367 DILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEG 426
+ R + EYLH S+ +I+ DLKP N+L+D+ V+DFG K +
Sbjct: 161 EPHARF-YAAQIVLTFEYLH----SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--- 212
Query: 427 EDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLME 467
R T Y+APE L + D ++ GVL+ E
Sbjct: 213 --KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 251
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 19/211 (9%)
Query: 271 TDEFNECNLLGTSSFGSVYKGTISDGTDV--AIKVFNLQLERAFRSFDSECEVL-RNVRH 327
TD + +G S+ SV K I T++ A+K+ ++++ R E E+L R +H
Sbjct: 21 TDGYEVKEDIGVGSY-SVCKRCIHKATNMEFAVKI----IDKSKRDPTEEIEILLRYGQH 75
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
N+I + Y + + +V E M G L + +F + E ++ + +EYLH
Sbjct: 76 PNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSE-REASAVLFTITKTVEYLH- 133
Query: 388 GHSSVHIIHCDLKPTNIL-LDEN---MVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
+ ++H DLKP+NIL +DE+ + DFG K L E+ + T T ++A
Sbjct: 134 ---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL-RAENGLLMTPCY-TANFVA 188
Query: 444 PEYGLEGIVSAKCDVYSYGVLLMETFTRKRP 474
PE A CD++S GVLL T P
Sbjct: 189 PEVLERQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 97/221 (43%), Gaps = 18/221 (8%)
Query: 251 EDFLPLAIWRRTSYLDIQRATDEFNECNLLGTSSFGSVYKGTISD-GTDVAIKVFNLQLE 309
EDFL W S Q D+F+ LGT SFG V + G A+K+ + Q
Sbjct: 11 EDFL--KKWETPSQNTAQ--LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV 66
Query: 310 RAFRSFD---SECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFL 366
+ + +E +L+ V L+K+ S+ + +V+E++ G + L F
Sbjct: 67 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS 126
Query: 367 DILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEG 426
+ R + EYLH S+ +I+ DLKP N+L+DE V+DFG K +
Sbjct: 127 EPHARF-YAAQIVLTFEYLH----SLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRV--- 178
Query: 427 EDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLME 467
R T Y+APE L + D ++ GVL+ E
Sbjct: 179 --KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 217
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 12/205 (5%)
Query: 278 NLLGTSSFGSVYKGTISDGTDVAIKVFNLQLER-----AFRSFDSECEVLRNVRHRNLIK 332
++G FG VY G D I+ L R +F E ++R + H N++
Sbjct: 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLA 86
Query: 333 ILSSYSNPD-FKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSS 391
++ P+ ++L +M +G L +++ S + + ++ + V +EYL +
Sbjct: 87 LIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYL----AE 142
Query: 392 VHIIHCDLKPTNILLDENMVAHVSDFGIYK-LLGEGEDSVRQ-TMTMATIGYMAPEYGLE 449
+H DL N +LDE+ V+DFG+ + +L SV+Q + + A E
Sbjct: 143 QKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQT 202
Query: 450 GIVSAKCDVYSYGVLLMETFTRKRP 474
+ K DV+S+GVLL E TR P
Sbjct: 203 YRFTTKSDVWSFGVLLWELLTRGAP 227
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 280 LGTSSFGSVYKGTISD------GTDVAIKVFNLQLE-RAFRSFDSECEVLRNVRHRNLIK 332
LG SFG VY+G D T VA+K N R F +E V++ ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 333 ILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLD---------ILERLNIMIDVGSALE 383
+L S +V+E M +G L+ +L S + + E + + ++ +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
YL+ + +H +L N ++ + + DFG+ + + E + + + + +MA
Sbjct: 145 YLN----AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 200
Query: 444 PEYGLEGIVSAKCDVYSYGVLLME 467
PE +G+ + D++S+GV+L E
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWE 224
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 280 LGTSSFGSVYKGTISD------GTDVAIKVFNLQLE-RAFRSFDSECEVLRNVRHRNLIK 332
LG SFG VY+G D T VA+K N R F +E V++ ++++
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 333 ILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLD---------ILERLNIMIDVGSALE 383
+L S +V+E M +G L+ +L S + + E + + ++ +
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 145
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
YL+ + +H +L N ++ + + DFG+ + + E + + + + +MA
Sbjct: 146 YLN----AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 201
Query: 444 PEYGLEGIVSAKCDVYSYGVLLME 467
PE +G+ + D++S+GV+L E
Sbjct: 202 PESLKDGVFTTSSDMWSFGVVLWE 225
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 97/221 (43%), Gaps = 18/221 (8%)
Query: 251 EDFLPLAIWRRTSYLDIQRATDEFNECNLLGTSSFGSVYKGTISD-GTDVAIKVFNLQLE 309
EDFL W S Q D+F+ LGT SFG V + G A+K+ + Q
Sbjct: 24 EDFL--KKWETPSQNTAQ--LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV 79
Query: 310 RAFRSFD---SECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFL 366
+ + +E +L+ V L+K+ S+ + +V+E++ G + L F
Sbjct: 80 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFX 139
Query: 367 DILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEG 426
+ R + EYLH S+ +I+ DLKP N+L+D+ V+DFG K +
Sbjct: 140 EPHARF-YAAQIVLTFEYLH----SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--- 191
Query: 427 EDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLME 467
R T Y+APE L + D ++ GVL+ E
Sbjct: 192 --KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 28/215 (13%)
Query: 276 ECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNV--RHRNLIKI 333
EC +G +G V++G+ G +VA+K+F+ R +S+ E E+ V RH N++
Sbjct: 43 EC--VGKGRYGEVWRGSWQ-GENVAVKIFS---SRDEKSWFRETELYNTVMLRHENILGF 96
Query: 334 LSSYSNPDFKA----LVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLH--- 386
++S + L+ + GSL +L LD + L I++ + S L +LH
Sbjct: 97 IASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTT--LDTVSCLRIVLSIASGLAHLHIEI 154
Query: 387 -NGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDS--VRQTMTMATIGYMA 443
I H DLK NIL+ +N ++D G+ + + + V + T YMA
Sbjct: 155 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMA 214
Query: 444 PEYGLEGIVSAKC-------DVYSYGVLLMETFTR 471
PE L+ + C D++++G++L E R
Sbjct: 215 PEV-LDETIQVDCFDSYKRVDIWAFGLVLWEVARR 248
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 98/195 (50%), Gaps = 21/195 (10%)
Query: 278 NLLGTSSFGSVY--KGTISDGTDVAIKVFNLQLERAFR--SFDSECEVLRNVRHRNLIKI 333
+LG+ +F V+ K ++ G A+K ++ AFR S ++E VL+ ++H N++ +
Sbjct: 15 EVLGSGAFSEVFLVKQRLT-GKLFALKC--IKKSPAFRDSSLENEIAVLKKIKHENIVTL 71
Query: 334 LSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLH-NGHSSV 392
Y + LV++ + G L + + + L ++ V SA++YLH NG
Sbjct: 72 EDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASL-VIQQVLSAVKYLHENG---- 126
Query: 393 HIIHCDLKPTNILL---DENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLE 449
I+H DLKP N+L +EN ++DFG+ K+ E + + T GY+APE +
Sbjct: 127 -IVHRDLKPENLLYLTPEENSKIMITDFGLSKM----EQNGIMSTACGTPGYVAPEVLAQ 181
Query: 450 GIVSAKCDVYSYGVL 464
S D +S GV+
Sbjct: 182 KPYSKAVDCWSIGVI 196
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 97/221 (43%), Gaps = 18/221 (8%)
Query: 251 EDFLPLAIWRRTSYLDIQRATDEFNECNLLGTSSFGSVYKGTISD-GTDVAIKVFNLQLE 309
EDFL W S Q D+F+ LGT SFG V + G A+K+ + Q
Sbjct: 24 EDFL--KKWETPSQNTAQ--LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV 79
Query: 310 RAFRSFD---SECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFL 366
+ + +E +L+ V L+K+ S+ + +V+E++ G + L F
Sbjct: 80 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS 139
Query: 367 DILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEG 426
+ R + EYLH S+ +I+ DLKP N+L+D+ V+DFG K +
Sbjct: 140 EPHARF-YAAQIVLTFEYLH----SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--- 191
Query: 427 EDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLME 467
R T Y+APE L + D ++ GVL+ E
Sbjct: 192 --KGRTWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 97/221 (43%), Gaps = 18/221 (8%)
Query: 251 EDFLPLAIWRRTSYLDIQRATDEFNECNLLGTSSFGSVYKGTISD-GTDVAIKVFNLQLE 309
EDFL W S Q D+F+ LGT SFG V + G A+K+ + Q
Sbjct: 24 EDFL--KKWETPSQNTAQ--LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV 79
Query: 310 RAFRSFD---SECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFL 366
+ + +E +L+ V L+K+ S+ + +V+E++ G + L F
Sbjct: 80 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS 139
Query: 367 DILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEG 426
+ R + EYLH S+ +I+ DLKP N+L+D+ V+DFG K +
Sbjct: 140 EPHARF-YAAQIVLTFEYLH----SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--- 191
Query: 427 EDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLME 467
R T Y+APE L + D ++ GVL+ E
Sbjct: 192 --KGRTWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 97/221 (43%), Gaps = 18/221 (8%)
Query: 251 EDFLPLAIWRRTSYLDIQRATDEFNECNLLGTSSFGSVYKGTISD-GTDVAIKVFNLQLE 309
EDFL W S Q D+F+ LGT SFG V + G A+K+ + Q
Sbjct: 19 EDFL--KKWETPSQNTAQ--LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV 74
Query: 310 RAFRSFD---SECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFL 366
+ + +E +L+ V L+K+ S+ + +V+E++ G + L F
Sbjct: 75 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFX 134
Query: 367 DILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEG 426
+ R + EYLH S+ +I+ DLKP N+L+D+ V+DFG K +
Sbjct: 135 EPHARF-YAAQIVLTFEYLH----SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--- 186
Query: 427 EDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLME 467
R T Y+APE L + D ++ GVL+ E
Sbjct: 187 --KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 225
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 93/208 (44%), Gaps = 19/208 (9%)
Query: 268 QRATDEFNECNLLGTSSFGSVYK-GTISDGTDVAIKVFNLQLERAFR------SFDSECE 320
Q+ D ++ LG+ F V K S G + A K + RA R + E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 321 VLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGS 380
+LR V H N+I + Y N L+LE + G L +L + L E + + +
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILD 126
Query: 381 ALEYLHNGHSSVHIIHCDLKPTNI-LLDENM-VAHVS--DFGIYKLLGEGEDSVRQTMTM 436
+ YLH + I H DLKP NI LLD+N+ + H+ DFG L E ED V
Sbjct: 127 GVNYLH----TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG---LAHEIEDGVEFKNIF 179
Query: 437 ATIGYMAPEYGLEGIVSAKCDVYSYGVL 464
T ++APE + + D++S GV+
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 97/221 (43%), Gaps = 18/221 (8%)
Query: 251 EDFLPLAIWRRTSYLDIQRATDEFNECNLLGTSSFGSVYKGTISD-GTDVAIKVFNLQLE 309
EDFL W S Q D+F+ LGT SFG V + G A+K+ + Q
Sbjct: 24 EDFL--KKWETPSQNTAQ--LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV 79
Query: 310 RAFRSFD---SECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFL 366
+ + +E +L+ V L+K+ S+ + +V+E++ G + L F
Sbjct: 80 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFX 139
Query: 367 DILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEG 426
+ R + EYLH S+ +I+ DLKP N+L+D+ V+DFG K +
Sbjct: 140 EPHARF-YAAQIVLTFEYLH----SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--- 191
Query: 427 EDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLME 467
R T Y+APE L + D ++ GVL+ E
Sbjct: 192 --KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 97/221 (43%), Gaps = 18/221 (8%)
Query: 251 EDFLPLAIWRRTSYLDIQRATDEFNECNLLGTSSFGSVYKGTISD-GTDVAIKVFNLQLE 309
EDFL W S Q D+F+ LGT SFG V + G A+K+ + Q
Sbjct: 24 EDFL--KKWETPSQNTAQ--LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV 79
Query: 310 RAFRSFD---SECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFL 366
+ + +E +L+ V L+K+ S+ + +V+E++ G + L F
Sbjct: 80 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFX 139
Query: 367 DILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEG 426
+ R + EYLH S+ +I+ DLKP N+L+D+ V+DFG K +
Sbjct: 140 EPHARF-YAAQIVLTFEYLH----SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--- 191
Query: 427 EDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLME 467
R T Y+APE L + D ++ GVL+ E
Sbjct: 192 --KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 93/208 (44%), Gaps = 19/208 (9%)
Query: 268 QRATDEFNECNLLGTSSFGSVYK-GTISDGTDVAIKVFNLQLERAFR------SFDSECE 320
Q+ D ++ LG+ F V K S G + A K + RA R + E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 321 VLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGS 380
+LR V H N+I + Y N L+LE + G L +L + L E + + +
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILD 126
Query: 381 ALEYLHNGHSSVHIIHCDLKPTNI-LLDENM-VAHVS--DFGIYKLLGEGEDSVRQTMTM 436
+ YLH + I H DLKP NI LLD+N+ + H+ DFG L E ED V
Sbjct: 127 GVNYLH----TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG---LAHEIEDGVEFKNIF 179
Query: 437 ATIGYMAPEYGLEGIVSAKCDVYSYGVL 464
T ++APE + + D++S GV+
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 93/208 (44%), Gaps = 19/208 (9%)
Query: 268 QRATDEFNECNLLGTSSFGSVYK-GTISDGTDVAIKVFNLQLERAFR------SFDSECE 320
Q+ D ++ LG+ F V K S G + A K + RA R + E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 321 VLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGS 380
+LR V H N+I + Y N L+LE + G L +L + L E + + +
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILD 126
Query: 381 ALEYLHNGHSSVHIIHCDLKPTNI-LLDENM-VAHVS--DFGIYKLLGEGEDSVRQTMTM 436
+ YLH + I H DLKP NI LLD+N+ + H+ DFG L E ED V
Sbjct: 127 GVNYLH----TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG---LAHEIEDGVEFKNIF 179
Query: 437 ATIGYMAPEYGLEGIVSAKCDVYSYGVL 464
T ++APE + + D++S GV+
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 28/215 (13%)
Query: 276 ECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNV--RHRNLIKI 333
EC +G +G V++G+ G +VA+K+F+ R +S+ E E+ V RH N++
Sbjct: 14 EC--VGKGRYGEVWRGSWQ-GENVAVKIFS---SRDEKSWFRETELYNTVMLRHENILGF 67
Query: 334 LSSYSNPDFKA----LVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLH--- 386
++S + L+ + GSL +L LD + L I++ + S L +LH
Sbjct: 68 IASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTT--LDTVSCLRIVLSIASGLAHLHIEI 125
Query: 387 -NGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDS--VRQTMTMATIGYMA 443
I H DLK NIL+ +N ++D G+ + + + V + T YMA
Sbjct: 126 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMA 185
Query: 444 PEYGLEGIVSAKC-------DVYSYGVLLMETFTR 471
PE L+ + C D++++G++L E R
Sbjct: 186 PEV-LDETIQVDCFDSYKRVDIWAFGLVLWEVARR 219
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 132/313 (42%), Gaps = 31/313 (9%)
Query: 238 IRCRNRNTKKSDHEDFLPLAIWRR--TSYLDIQRAT--DEFNECNLLGTSSFGSVYKGT- 292
+R + K +D++ F IW++ +++++ + D ++ LG+ +FG V++
Sbjct: 14 VRGKYDGPKINDYDKFYE-DIWKKYVPQPVEVKQGSVYDYYDILEELGSGAFGVVHRCVE 72
Query: 293 ISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPN 352
+ G K N + +E ++ + H LI + ++ + L+LEF+
Sbjct: 73 KATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSG 132
Query: 353 GSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVA 412
G L + + +Y + E +N M L+++H HS I+H D+KP NI+ + +
Sbjct: 133 GELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHE-HS---IVHLDIKPENIMCETKKAS 188
Query: 413 HVS--DFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
V DFG+ L E +T AT + APE V D+++ GVL +
Sbjct: 189 SVKIIDFGLATKLNPDEIV---KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLS 245
Query: 471 RKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDFALDCC 530
P F GE L L V + +E AFS+ DF +
Sbjct: 246 GLSP----FAGEDDLE---------TLQNVKRCDWEFDEDAFSS---VSPEAKDFIKNLL 289
Query: 531 MESPDMRINMTDA 543
+ P R+ + DA
Sbjct: 290 QKEPRKRLTVHDA 302
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 93/208 (44%), Gaps = 19/208 (9%)
Query: 268 QRATDEFNECNLLGTSSFGSVYK-GTISDGTDVAIKVFNLQLERAFR------SFDSECE 320
Q+ D ++ LG+ F V K S G + A K + RA R + E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 321 VLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGS 380
+LR V H N+I + Y N L+LE + G L +L + L E + + +
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILD 126
Query: 381 ALEYLHNGHSSVHIIHCDLKPTNI-LLDENM-VAHVS--DFGIYKLLGEGEDSVRQTMTM 436
+ YLH + I H DLKP NI LLD+N+ + H+ DFG L E ED V
Sbjct: 127 GVNYLH----TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG---LAHEIEDGVEFKNIF 179
Query: 437 ATIGYMAPEYGLEGIVSAKCDVYSYGVL 464
T ++APE + + D++S GV+
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 97/221 (43%), Gaps = 18/221 (8%)
Query: 251 EDFLPLAIWRRTSYLDIQRATDEFNECNLLGTSSFGSVYKGTISD-GTDVAIKVFNLQLE 309
EDFL W S Q D+F+ LGT SFG V + G A+K+ + Q
Sbjct: 24 EDFL--KKWETPSQNTAQ--LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV 79
Query: 310 RAFRSFD---SECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFL 366
+ + +E +L+ V L+K+ S+ + +V+E++ G + L F
Sbjct: 80 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFA 139
Query: 367 DILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEG 426
+ R + EYLH S+ +I+ DLKP N+L+D+ V+DFG K +
Sbjct: 140 EPHARF-YAAQIVLTFEYLH----SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--- 191
Query: 427 EDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLME 467
R T Y+APE L + D ++ GVL+ E
Sbjct: 192 --KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 93/208 (44%), Gaps = 19/208 (9%)
Query: 268 QRATDEFNECNLLGTSSFGSVYK-GTISDGTDVAIKVFNLQLERAFR------SFDSECE 320
Q+ D ++ LG+ F V K S G + A K + RA R + E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 321 VLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGS 380
+LR V H N+I + Y N L+LE + G L +L + L E + + +
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILD 126
Query: 381 ALEYLHNGHSSVHIIHCDLKPTNI-LLDENM-VAHVS--DFGIYKLLGEGEDSVRQTMTM 436
+ YLH + I H DLKP NI LLD+N+ + H+ DFG L E ED V
Sbjct: 127 GVNYLH----TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG---LAHEIEDGVEFKNIF 179
Query: 437 ATIGYMAPEYGLEGIVSAKCDVYSYGVL 464
T ++APE + + D++S GV+
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 124/259 (47%), Gaps = 19/259 (7%)
Query: 239 RCRNRNTKKSDHEDFLPLAIWRRTSYLDIQRATDEFNECNLLGTSSFGSVYKGTI-SDGT 297
R R ++ HE F A+ D + D F + +G S G V T+ S G
Sbjct: 45 RSPQREPQRVSHEQFR-AALQLVVDPGDPRSYLDNFIK---IGEGSTGIVCIATVRSSGK 100
Query: 298 DVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEK 357
VA+K +L+ ++ +E ++R+ +H N++++ +SY D +V+EF+ G+L
Sbjct: 101 LVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD 160
Query: 358 WLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDF 417
+ +H ++ + + + V AL LH + +IH D+K +ILL + +SDF
Sbjct: 161 -IVTHTR-MNEEQIAAVCLAVLQALSVLH----AQGVIHRDIKSDSILLTHDGRVKLSDF 214
Query: 418 GIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDE 477
G + ++ R+ + T +MAPE + D++S G++++E + P
Sbjct: 215 GFCAQV--SKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP--- 269
Query: 478 MFIGEMSLR--RWVKESLP 494
+ E L+ + ++++LP
Sbjct: 270 -YFNEPPLKAMKMIRDNLP 287
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 28/215 (13%)
Query: 276 ECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNV--RHRNLIKI 333
EC +G +G V++G+ G +VA+K+F+ R +S+ E E+ V RH N++
Sbjct: 14 EC--VGKGRYGEVWRGSWQ-GENVAVKIFS---SRDEKSWFRETELYNTVMLRHENILGF 67
Query: 334 LSSYSNPDFKA----LVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLH--- 386
++S + L+ + GSL +L LD + L I++ + S L +LH
Sbjct: 68 IASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTT--LDTVSCLRIVLSIASGLAHLHIEI 125
Query: 387 -NGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDS--VRQTMTMATIGYMA 443
I H DLK NIL+ +N ++D G+ + + + V + T YMA
Sbjct: 126 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMA 185
Query: 444 PEYGLEGIVSAKC-------DVYSYGVLLMETFTR 471
PE L+ + C D++++G++L E R
Sbjct: 186 PEV-LDETIQVDCFDSYKRVDIWAFGLVLWEVARR 219
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 90/203 (44%), Gaps = 20/203 (9%)
Query: 272 DEFNECNLLGTSSFGSV----YKGTISDGTDVAIKVFNLQLERAFRSFD---SECEVLRN 324
D+F LGT SFG V +K T G A+K+ + Q + + +E + +
Sbjct: 42 DQFERIRTLGTGSFGRVMLVKHKET---GNHYAMKILDKQKVVKLKQIEHTLNEKRIQQA 98
Query: 325 VRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEY 384
V L+K+ S+ + +VLE+ P G + L F + R + EY
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEY 157
Query: 385 LHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAP 444
LH S+ +I+ DLKP N+L+D+ V+DFG K + R T Y+AP
Sbjct: 158 LH----SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV-----KGRTWXLCGTPEYLAP 208
Query: 445 EYGLEGIVSAKCDVYSYGVLLME 467
E L + D ++ GVL+ E
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYE 231
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 107/217 (49%), Gaps = 27/217 (12%)
Query: 285 FGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSY---SNPD 341
FG V+K + + VA+K+F +Q ++++++ + E L ++H N+++ + + ++ D
Sbjct: 37 FGCVWKAQLLNEY-VAVKIFPIQDKQSWQN-EYEVYSLPGMKHENILQFIGAEKRGTSVD 94
Query: 342 FK-ALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLH-------NGHSSVH 393
L+ F GSL +L ++ + E +I + L YLH +GH
Sbjct: 95 VDLWLITAFHEKGSLSDFLKAN--VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPA- 151
Query: 394 IIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVS 453
I H D+K N+LL N+ A ++DFG+ G+ + + T YMAPE LEG ++
Sbjct: 152 ISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEV-LEGAIN 210
Query: 454 ------AKCDVYSYGVLLMETFTR----KRPTDEMFI 480
+ D+Y+ G++L E +R P DE +
Sbjct: 211 FQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYML 247
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 96/207 (46%), Gaps = 20/207 (9%)
Query: 280 LGTSSFGSVY----KGTISDG--TDVAIKVFNLQLERAFR-SFDSECEVLRNVRHRNLIK 332
LG SFG VY KG + D T VAIK N R F +E V++ ++++
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 333 ILSSYSNPDFKALVLEFMPNGSLEKWLYS------HNYFL---DILERLNIMIDVGSALE 383
+L S +++E M G L+ +L S +N L + + + + ++ +
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
YL+ + +H DL N + E+ + DFG+ + + E + + + + +M+
Sbjct: 140 YLN----ANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 195
Query: 444 PEYGLEGIVSAKCDVYSYGVLLMETFT 470
PE +G+ + DV+S+GV+L E T
Sbjct: 196 PESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 88/200 (44%), Gaps = 14/200 (7%)
Query: 272 DEFNECNLLGTSSFGSVY-KGTISDGTDVAIKVFNLQLERAFRSFD---SECEVLRNVRH 327
D+F LGT SFG V + G A+K+ + Q + + +E +L+ V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
L K+ S+ + +V+E+ P G + L F + R + EYLH
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 159
Query: 388 GHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYG 447
S+ +I+ DLKP N+++D+ V+DFG K + R T Y+APE
Sbjct: 160 ---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-----KGRTWXLCGTPEYLAPEII 211
Query: 448 LEGIVSAKCDVYSYGVLLME 467
L + D ++ GVL+ E
Sbjct: 212 LSKGYNKAVDWWALGVLIYE 231
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 97/221 (43%), Gaps = 18/221 (8%)
Query: 251 EDFLPLAIWRRTSYLDIQRATDEFNECNLLGTSSFGSVYKGTISD-GTDVAIKVFNLQLE 309
EDFL W S Q D+F+ LGT SFG V + G A+K+ + Q
Sbjct: 24 EDFL--KKWETPSQNTAQ--LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV 79
Query: 310 RAFRSFD---SECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFL 366
+ + +E +L+ V L+K+ S+ + +V+E++ G + L F
Sbjct: 80 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS 139
Query: 367 DILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEG 426
+ R + EYLH S+ +I+ DLKP N+L+D+ V+DFG K +
Sbjct: 140 EPHARF-YAAQIVLTFEYLH----SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--- 191
Query: 427 EDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLME 467
R T Y+APE L + D ++ GVL+ E
Sbjct: 192 --KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 98/228 (42%), Gaps = 36/228 (15%)
Query: 269 RATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNL-QLERAFRSFDSECEVLRNVR 326
R +F LG FG V++ D + AIK L E A E + L +
Sbjct: 2 RYLTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLE 61
Query: 327 HRNLIKILSSY-----------SNPD-FKALVLEFMPNGSLEKWLYSHNYFLDILER--- 371
H +++ +++ S+P + + ++ +L+ W+ N I ER
Sbjct: 62 HPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWM---NGRCTIEERERS 118
Query: 372 --LNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDS 429
L+I + + A+E+LH S ++H DLKP+NI + V V DFG+ + + E+
Sbjct: 119 VCLHIFLQIAEAVEFLH----SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEE 174
Query: 430 ----------VRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLME 467
R T + T YM+PE S K D++S G++L E
Sbjct: 175 QTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFE 222
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 93/208 (44%), Gaps = 19/208 (9%)
Query: 268 QRATDEFNECNLLGTSSFGSVYK-GTISDGTDVAIKVFNLQLERAFR------SFDSECE 320
Q+ D ++ LG+ F V K S G + A K + RA R + E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVS 67
Query: 321 VLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGS 380
+LR V H N+I + Y N L+LE + G L +L + L E + + +
Sbjct: 68 ILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILD 126
Query: 381 ALEYLHNGHSSVHIIHCDLKPTNI-LLDENM-VAHVS--DFGIYKLLGEGEDSVRQTMTM 436
+ YLH + I H DLKP NI LLD+N+ + H+ DFG L E ED V
Sbjct: 127 GVNYLH----TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG---LAHEIEDGVEFKNIF 179
Query: 437 ATIGYMAPEYGLEGIVSAKCDVYSYGVL 464
T ++APE + + D++S GV+
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 18/211 (8%)
Query: 274 FNECNLLGTSSFGSVYKGTISDGTDV-AIKVFNLQLERAFRSF-DSECEVLRNVRHRNLI 331
F + + +G SFG VYKG + +V AIK+ +L+ E VL +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 332 KILSSYSNPDFKALVLEFMPNGS----LEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
+ SY +++E++ GS L+ Y IL ++ L+YLH
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILR------EILKGLDYLH- 133
Query: 388 GHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYG 447
S IH D+K N+LL E ++DFG+ L + + +++ + T +MAPE
Sbjct: 134 ---SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ--IKRNXFVGTPFWMAPEVI 188
Query: 448 LEGIVSAKCDVYSYGVLLMETFTRKRPTDEM 478
+ K D++S G+ +E + P ++
Sbjct: 189 KQSAYDFKADIWSLGITAIELAKGEPPNSDL 219
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 97/221 (43%), Gaps = 18/221 (8%)
Query: 251 EDFLPLAIWRRTSYLDIQRATDEFNECNLLGTSSFGSVYKGTISD-GTDVAIKVFNLQLE 309
EDFL W S Q D+F+ LGT SFG V + G A+K+ + Q
Sbjct: 24 EDFL--KKWETPSQNTAQ--LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV 79
Query: 310 RAFRSFD---SECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFL 366
+ + +E +L+ V L+K+ S+ + +V+E++ G + L F
Sbjct: 80 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS 139
Query: 367 DILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEG 426
+ R + EYLH S+ +I+ DLKP N+L+D+ V+DFG K +
Sbjct: 140 EPHARF-YAAQIVLTFEYLH----SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--- 191
Query: 427 EDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLME 467
R T Y+APE L + D ++ GVL+ E
Sbjct: 192 --KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 97/221 (43%), Gaps = 18/221 (8%)
Query: 251 EDFLPLAIWRRTSYLDIQRATDEFNECNLLGTSSFGSVYKGTISD-GTDVAIKVFNLQLE 309
EDFL W S Q D+F+ LGT SFG V + G A+K+ + Q
Sbjct: 24 EDFL--KKWETPSQNTAQ--LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV 79
Query: 310 RAFRSFD---SECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFL 366
+ + +E +L+ V L+K+ S+ + +V+E++ G + L F
Sbjct: 80 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS 139
Query: 367 DILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEG 426
+ R + EYLH S+ +I+ DLKP N+L+D+ V+DFG K +
Sbjct: 140 EPHARF-YAAQIVLTFEYLH----SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--- 191
Query: 427 EDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLME 467
R T Y+APE L + D ++ GVL+ E
Sbjct: 192 --KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 88/200 (44%), Gaps = 14/200 (7%)
Query: 272 DEFNECNLLGTSSFGSVY-KGTISDGTDVAIKVFNLQLERAFRSFD---SECEVLRNVRH 327
D+F LGT SFG V + G A+K+ + Q + + +E +L+ V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
L K+ S+ + +V+E+ P G + L F + R + EYLH
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 388 GHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYG 447
S+ +I+ DLKP N+++D+ V+DFG K + R T Y+APE
Sbjct: 160 ---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-----KGRTWXLCGTPEYLAPEII 211
Query: 448 LEGIVSAKCDVYSYGVLLME 467
L + D ++ GVL+ E
Sbjct: 212 LSKGYNKAVDWWALGVLIYE 231
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 97/221 (43%), Gaps = 18/221 (8%)
Query: 251 EDFLPLAIWRRTSYLDIQRATDEFNECNLLGTSSFGSVYKGTISD-GTDVAIKVFNLQLE 309
EDFL W S Q D+F+ LGT SFG V + G A+K+ + Q
Sbjct: 24 EDFL--KKWETPSQNTAQ--LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV 79
Query: 310 RAFRSFD---SECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFL 366
+ + +E +L+ V L+K+ S+ + +V+E++ G + L F
Sbjct: 80 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS 139
Query: 367 DILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEG 426
+ R + EYLH S+ +I+ DLKP N+L+D+ V+DFG K +
Sbjct: 140 EPHARF-YAAQIVLTFEYLH----SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--- 191
Query: 427 EDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLME 467
R T Y+APE L + D ++ GVL+ E
Sbjct: 192 --KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 99/213 (46%), Gaps = 27/213 (12%)
Query: 269 RATDEFNECNLLGTSSFGSVYKGTISD-GTDVAIKVF------NLQLERAFRSFDSECEV 321
++ +++ L+G S+G V K D G VAIK F + + A R E ++
Sbjct: 22 QSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMR----EIKL 77
Query: 322 LRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKW-LYSHNYFLDILERLNIMIDVGS 380
L+ +RH NL+ +L LV EF+ + L+ L+ + ++++ I G
Sbjct: 78 LKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGI 137
Query: 381 ALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLL---GEGEDSVRQTMTMA 437
+ HN IIH D+KP NIL+ ++ V + DFG + L GE D +A
Sbjct: 138 GFCHSHN------IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDD-----EVA 186
Query: 438 TIGYMAPEYGLEGIVSAKC-DVYSYGVLLMETF 469
T Y APE + + K DV++ G L+ E F
Sbjct: 187 TRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMF 219
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 20/209 (9%)
Query: 280 LGTSSFGSVYKGTISD-GTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYS 338
LG +FG VYK + G A KV + E + E E+L H ++K+L +Y
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 339 NPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCD 398
+ +++EF P G+++ + + L + + + AL +LH S IIH D
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH----SKRIIHRD 134
Query: 399 LKPTNILLDENMVAHVSDFGI----YKLLGEGEDSVRQTMTMATIGYMAPEYGL-----E 449
LK N+L+ ++DFG+ K L + DS + T +MAPE + +
Sbjct: 135 LKAGNVLMTLEGDIRLADFGVSAKNLKTL-QKRDSF-----IGTPYWMAPEVVMCETMKD 188
Query: 450 GIVSAKCDVYSYGVLLMETFTRKRPTDEM 478
K D++S G+ L+E + P E+
Sbjct: 189 TPYDYKADIWSLGITLIEMAQIEPPHHEL 217
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 97/221 (43%), Gaps = 18/221 (8%)
Query: 251 EDFLPLAIWRRTSYLDIQRATDEFNECNLLGTSSFGSVYKGTISD-GTDVAIKVFNLQLE 309
EDFL W S Q D+F+ LGT SFG V + G A+K+ + Q
Sbjct: 24 EDFL--KKWETPSQNTAQ--LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV 79
Query: 310 RAFRSFD---SECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFL 366
+ + +E +L+ V L+K+ S+ + +V+E++ G + L F
Sbjct: 80 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS 139
Query: 367 DILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEG 426
+ R + EYLH S+ +I+ DLKP N+L+D+ V+DFG K +
Sbjct: 140 EPHARF-YAAQIVLTFEYLH----SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--- 191
Query: 427 EDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLME 467
R T Y+APE L + D ++ GVL+ E
Sbjct: 192 --KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 99/222 (44%), Gaps = 20/222 (9%)
Query: 251 EDFLPLAIWRRTSYLDIQRATDEFNECNLLGTSSFGSVYKGTISD-GTDVAIKVFNLQLE 309
EDFL W S Q D+F+ LGT SFG V + G A+K+ + Q
Sbjct: 45 EDFL--KKWETPSQNTAQ--LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV 100
Query: 310 RAFRSFD---SECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFL 366
+ + +E +L+ V L+K+ S+ + +V+E++ G + L F
Sbjct: 101 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS 160
Query: 367 DILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEG 426
+ R + EYLH S+ +I+ DLKP N+L+D+ V+DFG K +
Sbjct: 161 EPHARF-YAAQIVLTFEYLH----SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGA 215
Query: 427 EDSVRQTMTM-ATIGYMAPEYGLEGIVSAKCDVYSYGVLLME 467
T T+ T Y+APE L + D ++ GVL+ E
Sbjct: 216 ------TWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 251
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 97/221 (43%), Gaps = 18/221 (8%)
Query: 251 EDFLPLAIWRRTSYLDIQRATDEFNECNLLGTSSFGSVYKGTISD-GTDVAIKVFNLQLE 309
EDFL W S Q D+F+ LGT SFG V + G A+K+ + Q
Sbjct: 25 EDFL--KKWETPSQNTAQ--LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV 80
Query: 310 RAFRSFD---SECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFL 366
+ + +E +L+ V L+K+ S+ + +V+E++ G + L F
Sbjct: 81 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS 140
Query: 367 DILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEG 426
+ R + EYLH S+ +I+ DLKP N+L+D+ V+DFG K +
Sbjct: 141 EPHARF-YAAQIVLTFEYLH----SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--- 192
Query: 427 EDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLME 467
R T Y+APE L + D ++ GVL+ E
Sbjct: 193 --KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 125/262 (47%), Gaps = 19/262 (7%)
Query: 239 RCRNRNTKKSDHEDFLPLAIWRRTSYLDIQRATDEFNECNLLGTSSFGSVYKGTI-SDGT 297
R R ++ HE F A+ D + D F + +G S G V T+ S G
Sbjct: 122 RSPQREPQRVSHEQFR-AALQLVVDPGDPRSYLDNFIK---IGEGSTGIVCIATVRSSGK 177
Query: 298 DVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEK 357
VA+K +L+ ++ +E ++R+ +H N++++ +SY D +V+EF+ G+L
Sbjct: 178 LVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD 237
Query: 358 WLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDF 417
+ +H ++ + + + V AL LH + +IH D+K +ILL + +SDF
Sbjct: 238 -IVTHTR-MNEEQIAAVCLAVLQALSVLH----AQGVIHRDIKSDSILLTHDGRVKLSDF 291
Query: 418 GIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDE 477
G + ++ R+ + T +MAPE + D++S G++++E + P
Sbjct: 292 GFCAQV--SKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP--- 346
Query: 478 MFIGEMSLR--RWVKESLPHGL 497
+ E L+ + ++++LP L
Sbjct: 347 -YFNEPPLKAMKMIRDNLPPRL 367
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 28/212 (13%)
Query: 285 FGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLR--NVRHRNLIKILSSY---SN 339
FG V+K + + VA+K+F LQ ++ S+ SE E+ ++H NL++ +++ SN
Sbjct: 28 FGCVWKAQLMNDF-VAVKIFPLQDKQ---SWQSEREIFSTPGMKHENLLQFIAAEKRGSN 83
Query: 340 PDFK-ALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN--------GHS 390
+ + L+ F GSL +L + + E ++ + L YLH GH
Sbjct: 84 LEVELWLITAFHDKGSLTDYLKGN--IITWNELCHVAETMSRGLSYLHEDVPWCRGEGHK 141
Query: 391 SVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEG 450
I H D K N+LL ++ A ++DFG+ G+ + T YMAPE LEG
Sbjct: 142 P-SIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEV-LEG 199
Query: 451 IVS------AKCDVYSYGVLLMETFTRKRPTD 476
++ + D+Y+ G++L E +R + D
Sbjct: 200 AINFQRDAFLRIDMYAMGLVLWELVSRCKAAD 231
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 100/216 (46%), Gaps = 36/216 (16%)
Query: 280 LGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNV--RHRNLIKILSSY 337
+G FG V++G G +VA+K+F+ R RS+ E E+ + V RH N++ +++
Sbjct: 50 IGKGRFGEVWRGKWR-GEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAA- 104
Query: 338 SNPDFKA-----LVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLH----NG 388
N D LV ++ +GSL +L + Y + + + + + S L +LH
Sbjct: 105 DNKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHMEIVGT 162
Query: 389 HSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMA------TIGYM 442
I H DLK NIL+ +N ++D G L DS T+ +A T YM
Sbjct: 163 QGKPAIAHRDLKSKNILVKKNGTCCIADLG----LAVRHDSATDTIDIAPNHRVGTKRYM 218
Query: 443 APEYGLEGIVSAK-------CDVYSYGVLLMETFTR 471
APE L+ ++ K D+Y+ G++ E R
Sbjct: 219 APEV-LDDSINMKHFESFKRADIYAMGLVFWEIARR 253
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 13/206 (6%)
Query: 280 LGTSSFGSVYKGTI---SDGTDVAIKVFNLQLERA-FRSFDSECEVLRNVRHRNLIKILS 335
LG +FGSV +G DVAIKV E+A E +++ + + +++++
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 336 SYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHII 395
+ LV+E G L K+L + + ++ V ++YL + +
Sbjct: 78 V-CQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN----FV 132
Query: 396 HCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMAT--IGYMAPEYGLEGIVS 453
H DL N+LL A +SDFG+ K LG +DS + + + APE S
Sbjct: 133 HRDLAARNVLLVNRHYAKISDFGLSKALG-ADDSYYTARSAGKWPLKWYAPECINFRKFS 191
Query: 454 AKCDVYSYGVLLMETFTR-KRPTDEM 478
++ DV+SYGV + E + ++P +M
Sbjct: 192 SRSDVWSYGVTMWEALSYGQKPYKKM 217
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 92/211 (43%), Gaps = 21/211 (9%)
Query: 278 NLLGTSSFGSVYKGTISDGTDVAIKVFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILS 335
L+G FG VY G +VAI++ +++ E ++F E R RH N++ +
Sbjct: 39 ELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMG 96
Query: 336 SYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHII 395
+ +P A++ +L + LD+ + I ++ + YLH + I+
Sbjct: 97 ACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH----AKGIL 152
Query: 396 HCDLKPTNILLDENMVAHVSDFGIYKL-----LGEGEDSVRQT------MTMATIGYMAP 444
H DLK N+ D V ++DFG++ + G ED +R + I ++P
Sbjct: 153 HKDLKSKNVFYDNGKVV-ITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSP 211
Query: 445 EYGLEGI-VSAKCDVYSYGVLLMETFTRKRP 474
+ + + S DV++ G + E R+ P
Sbjct: 212 DTEEDKLPFSKHSDVFALGTIWYELHAREWP 242
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 100/216 (46%), Gaps = 36/216 (16%)
Query: 280 LGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNV--RHRNLIKILSSY 337
+G FG V++G G +VA+K+F+ R RS+ E E+ + V RH N++ +++
Sbjct: 37 IGKGRFGEVWRGKWR-GEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAA- 91
Query: 338 SNPDFKA-----LVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLH----NG 388
N D LV ++ +GSL +L + Y + + + + + S L +LH
Sbjct: 92 DNKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHMEIVGT 149
Query: 389 HSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMA------TIGYM 442
I H DLK NIL+ +N ++D G L DS T+ +A T YM
Sbjct: 150 QGKPAIAHRDLKSKNILVKKNGTCCIADLG----LAVRHDSATDTIDIAPNHRVGTKRYM 205
Query: 443 APEYGLEGIVSAK-------CDVYSYGVLLMETFTR 471
APE L+ ++ K D+Y+ G++ E R
Sbjct: 206 APEV-LDDSINMKHFESFKRADIYAMGLVFWEIARR 240
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 88/200 (44%), Gaps = 14/200 (7%)
Query: 272 DEFNECNLLGTSSFGSVY-KGTISDGTDVAIKVFNLQLERAFRSFD---SECEVLRNVRH 327
D+F LGT SFG V + G A+K+ + Q + + +E +L+ V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
L K+ S+ + +V+E+ P G + L F + R + EYLH
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 388 GHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYG 447
S+ +I+ DLKP N+++D+ V+DFG K + R T Y+APE
Sbjct: 160 ---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-----KGRTWXLCGTPEYLAPEII 211
Query: 448 LEGIVSAKCDVYSYGVLLME 467
L + D ++ GVL+ E
Sbjct: 212 LSKGYNKAVDWWALGVLIYE 231
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 139/308 (45%), Gaps = 44/308 (14%)
Query: 272 DEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLERAFRS-FDSECEVLRNVRHRN 329
D+F + + LG + G V+K + G +A K+ +L+++ A R+ E +VL
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 68
Query: 330 LIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLD-ILERLNIMIDVGSALEYLHNG 388
++ ++ + ++ +E M GSL++ L + IL +++I + G L YL
Sbjct: 69 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG--LTYLREK 126
Query: 389 HSSVHIIHCDLKPTNILLDENMVAHVSDFGIY-KLLGEGEDSVRQTMTMATIGYMAPEYG 447
H I+H D+KP+NIL++ + DFG+ +L+ E + + T YM+PE
Sbjct: 127 HK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEF-----VGTRSYMSPER- 177
Query: 448 LEGI-VSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLV 506
L+G S + D++S G+ L+E + P M I E L ++ P L V
Sbjct: 178 LQGTHYSVQSDIWSMGLSLVEMAVGRYPRPPMAIFE--LLDYIVNEPPPKLPSAV----- 230
Query: 507 REEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVKFL---DDAAATNW 563
FS L DF C +++P R A LK++ V DA ++
Sbjct: 231 -----FS------LEFQDFVNKCLIKNPAER-------ADLKQLMVHAFIKRSDAEEVDF 272
Query: 564 RNFHCVSL 571
+ C ++
Sbjct: 273 AGWLCSTI 280
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 100/216 (46%), Gaps = 36/216 (16%)
Query: 280 LGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNV--RHRNLIKILSSY 337
+G FG V++G G +VA+K+F+ R RS+ E E+ + V RH N++ +++
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAA- 65
Query: 338 SNPDFKA-----LVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLH----NG 388
N D LV ++ +GSL +L + Y + + + + + S L +LH
Sbjct: 66 DNKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHMEIVGT 123
Query: 389 HSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMA------TIGYM 442
I H DLK NIL+ +N ++D G L DS T+ +A T YM
Sbjct: 124 QGKPAIAHRDLKSKNILVKKNGTCCIADLG----LAVRHDSATDTIDIAPNHRVGTKRYM 179
Query: 443 APEYGLEGIVSAK-------CDVYSYGVLLMETFTR 471
APE L+ ++ K D+Y+ G++ E R
Sbjct: 180 APEV-LDDSINMKHFESFKRADIYAMGLVFWEIARR 214
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 20/209 (9%)
Query: 280 LGTSSFGSVYKGTISD-GTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYS 338
LG +FG VYK + G A KV + E + E E+L H ++K+L +Y
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 339 NPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCD 398
+ +++EF P G+++ + + L + + + AL +LH S IIH D
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH----SKRIIHRD 142
Query: 399 LKPTNILLDENMVAHVSDFGI----YKLLGEGEDSVRQTMTMATIGYMAPEYGL-----E 449
LK N+L+ ++DFG+ K L + DS + T +MAPE + +
Sbjct: 143 LKAGNVLMTLEGDIRLADFGVSAKNLKTL-QKRDSF-----IGTPYWMAPEVVMCETMKD 196
Query: 450 GIVSAKCDVYSYGVLLMETFTRKRPTDEM 478
K D++S G+ L+E + P E+
Sbjct: 197 TPYDYKADIWSLGITLIEMAQIEPPHHEL 225
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 100/216 (46%), Gaps = 36/216 (16%)
Query: 280 LGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNV--RHRNLIKILSSY 337
+G FG V++G G +VA+K+F+ R RS+ E E+ + V RH N++ +++
Sbjct: 17 IGKGRFGEVWRGKWR-GEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAA- 71
Query: 338 SNPDFKA-----LVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLH----NG 388
N D LV ++ +GSL +L + Y + + + + + S L +LH
Sbjct: 72 DNKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHMEIVGT 129
Query: 389 HSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMA------TIGYM 442
I H DLK NIL+ +N ++D G L DS T+ +A T YM
Sbjct: 130 QGKPAIAHRDLKSKNILVKKNGTCCIADLG----LAVRHDSATDTIDIAPNHRVGTKRYM 185
Query: 443 APEYGLEGIVSAK-------CDVYSYGVLLMETFTR 471
APE L+ ++ K D+Y+ G++ E R
Sbjct: 186 APEV-LDDSINMKHFESFKRADIYAMGLVFWEIARR 220
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 100/216 (46%), Gaps = 36/216 (16%)
Query: 280 LGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNV--RHRNLIKILSSY 337
+G FG V++G G +VA+K+F+ R RS+ E E+ + V RH N++ +++
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAA- 68
Query: 338 SNPDFKA-----LVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLH----NG 388
N D LV ++ +GSL +L + Y + + + + + S L +LH
Sbjct: 69 DNKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHMEIVGT 126
Query: 389 HSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMA------TIGYM 442
I H DLK NIL+ +N ++D G L DS T+ +A T YM
Sbjct: 127 QGKPAIAHRDLKSKNILVKKNGTCCIADLG----LAVRHDSATDTIDIAPNHRVGTKRYM 182
Query: 443 APEYGLEGIVSAK-------CDVYSYGVLLMETFTR 471
APE L+ ++ K D+Y+ G++ E R
Sbjct: 183 APEV-LDDSINMKHFESFKRADIYAMGLVFWEIARR 217
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 89/200 (44%), Gaps = 14/200 (7%)
Query: 272 DEFNECNLLGTSSFGSVY-KGTISDGTDVAIKVFNLQLERAFRSFD---SECEVLRNVRH 327
D+F LGT SFG V + G A+K+ + Q + + +E +L+ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
L+K+ S+ + +V+E++ G + L F + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 388 GHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYG 447
S+ +I+ DLKP N+L+D+ V+DFG K + R T Y+APE
Sbjct: 159 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEII 210
Query: 448 LEGIVSAKCDVYSYGVLLME 467
L + D ++ GVL+ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 100/216 (46%), Gaps = 36/216 (16%)
Query: 280 LGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNV--RHRNLIKILSSY 337
+G FG V++G G +VA+K+F+ R RS+ E E+ + V RH N++ +++
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAA- 66
Query: 338 SNPDFKA-----LVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLH----NG 388
N D LV ++ +GSL +L + Y + + + + + S L +LH
Sbjct: 67 DNKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHMEIVGT 124
Query: 389 HSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMA------TIGYM 442
I H DLK NIL+ +N ++D G L DS T+ +A T YM
Sbjct: 125 QGKPAIAHRDLKSKNILVKKNGTCCIADLG----LAVRHDSATDTIDIAPNHRVGTKRYM 180
Query: 443 APEYGLEGIVSAK-------CDVYSYGVLLMETFTR 471
APE L+ ++ K D+Y+ G++ E R
Sbjct: 181 APEV-LDDSINMKHFESFKRADIYAMGLVFWEIARR 215
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 11/197 (5%)
Query: 280 LGTSSFGSVYK-GTISDGTDVAIKVFNL--QLERAFRSFDSECEVLRNVRHRNLIKILSS 336
+GT S+G K SDG + K + E + SE +LR ++H N+++
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 337 YSNPDFKAL--VLEFMPNGSLEKWLYS---HNYFLDILERLNIMIDVGSALEYLHNGHSS 391
+ L V+E+ G L + +LD L +M + AL+ H
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 392 VH-IIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEG 450
H ++H DLKP N+ LD + DFG+ ++L ED ++ + T YM+PE
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKE--FVGTPYYMSPEQMNRM 191
Query: 451 IVSAKCDVYSYGVLLME 467
+ K D++S G LL E
Sbjct: 192 SYNEKSDIWSLGCLLYE 208
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 93/194 (47%), Gaps = 17/194 (8%)
Query: 278 NLLGTSSFGSVYKGTISDGTDV---AIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKIL 334
N +G S+G V K + GT + A K+ +E R F E E+++++ H N+I++
Sbjct: 15 NTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDR-FKQEIEIMKSLDHPNIIRLY 72
Query: 335 SSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHI 394
++ + LV+E G L + + F + + IM DV SA+ Y H +++
Sbjct: 73 ETFEDNTDIYLVMELCTGGELFERVVHKRVFRES-DAARIMKDVLSAVAYCHK----LNV 127
Query: 395 IHCDLKPTNILL---DENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGI 451
H DLKP N L + + DFG+ G+ + T Y++P+ LEG+
Sbjct: 128 AHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK---MMRTKVGTPYYVSPQV-LEGL 183
Query: 452 VSAKCDVYSYGVLL 465
+CD +S GV++
Sbjct: 184 YGPECDEWSAGVMM 197
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 110/218 (50%), Gaps = 15/218 (6%)
Query: 280 LGTSSFGSVYKGTI-SDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYS 338
+G S G V T+ S G VA+K +L+ ++ +E ++R+ +H N++++ +SY
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 339 NPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCD 398
D +V+EF+ G+L + +H ++ + + + V AL LH + +IH D
Sbjct: 88 VGDELWVVMEFLEGGALTD-IVTHTR-MNEEQIAAVCLAVLQALSVLH----AQGVIHRD 141
Query: 399 LKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDV 458
+K +ILL + +SDFG + ++ R+ + T +MAPE + D+
Sbjct: 142 IKSDSILLTHDGRVKLSDFGFCAQV--SKEVPRRKXLVGTPYWMAPELISRLPYGPEVDI 199
Query: 459 YSYGVLLMETFTRKRPTDEMFIGEMSLR--RWVKESLP 494
+S G++++E + P + E L+ + ++++LP
Sbjct: 200 WSLGIMVIEMVDGEPP----YFNEPPLKAMKMIRDNLP 233
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 123/256 (48%), Gaps = 19/256 (7%)
Query: 242 NRNTKKSDHEDFLPLAIWRRTSYLDIQRATDEFNECNLLGTSSFGSVYKGTI-SDGTDVA 300
R ++ HE F A+ D + D F + +G S G V T+ S G VA
Sbjct: 5 QREPQRVSHEQFR-AALQLVVDPGDPRSYLDNFIK---IGEGSTGIVCIATVRSSGKLVA 60
Query: 301 IKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLY 360
+K +L+ ++ +E ++R+ +H N++++ +SY D +V+EF+ G+L +
Sbjct: 61 VKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD-IV 119
Query: 361 SHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIY 420
+H ++ + + + V AL LH + +IH D+K +ILL + +SDFG
Sbjct: 120 THTR-MNEEQIAAVCLAVLQALSVLH----AQGVIHRDIKSDSILLTHDGRVKLSDFGFC 174
Query: 421 KLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFI 480
+ ++ R+ + T +MAPE + D++S G++++E + P +
Sbjct: 175 AQV--SKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP----YF 228
Query: 481 GEMSLR--RWVKESLP 494
E L+ + ++++LP
Sbjct: 229 NEPPLKAMKMIRDNLP 244
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 96/227 (42%), Gaps = 34/227 (14%)
Query: 269 RATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLERAFRSFDSECEVLRNVRH 327
R +F E +LG +FG V K + D AIK E + SE +L ++ H
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASLNH 61
Query: 328 -------------RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 374
RN +K +++ + +E+ N +L ++S N E +
Sbjct: 62 QYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRL 121
Query: 375 MIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVR--- 431
+ AL Y+H S IIH DLKP NI +DE+ + DFG+ K + D ++
Sbjct: 122 FRQILEALSYIH----SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS 177
Query: 432 ---------QTMTMATIGYMAPEYGLEGI--VSAKCDVYSYGVLLME 467
T + T Y+A E L+G + K D+YS G++ E
Sbjct: 178 QNLPGSSDNLTSAIGTAMYVATEV-LDGTGHYNEKIDMYSLGIIFFE 223
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 123/256 (48%), Gaps = 19/256 (7%)
Query: 242 NRNTKKSDHEDFLPLAIWRRTSYLDIQRATDEFNECNLLGTSSFGSVYKGTI-SDGTDVA 300
R ++ HE F A+ D + D F + +G S G V T+ S G VA
Sbjct: 3 QREPQRVSHEQFR-AALQLVVDPGDPRSYLDNFIK---IGEGSTGIVCIATVRSSGKLVA 58
Query: 301 IKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLY 360
+K +L+ ++ +E ++R+ +H N++++ +SY D +V+EF+ G+L +
Sbjct: 59 VKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD-IV 117
Query: 361 SHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIY 420
+H ++ + + + V AL LH + +IH D+K +ILL + +SDFG
Sbjct: 118 THTR-MNEEQIAAVCLAVLQALSVLH----AQGVIHRDIKSDSILLTHDGRVKLSDFGFC 172
Query: 421 KLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFI 480
+ ++ R+ + T +MAPE + D++S G++++E + P +
Sbjct: 173 AQV--SKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP----YF 226
Query: 481 GEMSLR--RWVKESLP 494
E L+ + ++++LP
Sbjct: 227 NEPPLKAMKMIRDNLP 242
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 93/194 (47%), Gaps = 17/194 (8%)
Query: 278 NLLGTSSFGSVYKGTISDGTDV---AIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKIL 334
N +G S+G V K + GT + A K+ +E R F E E+++++ H N+I++
Sbjct: 32 NTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDR-FKQEIEIMKSLDHPNIIRLY 89
Query: 335 SSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHI 394
++ + LV+E G L + + F + + IM DV SA+ Y H +++
Sbjct: 90 ETFEDNTDIYLVMELCTGGELFERVVHKRVFRES-DAARIMKDVLSAVAYCHK----LNV 144
Query: 395 IHCDLKPTNILL---DENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGI 451
H DLKP N L + + DFG+ G+ + T Y++P+ LEG+
Sbjct: 145 AHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK---MMRTKVGTPYYVSPQV-LEGL 200
Query: 452 VSAKCDVYSYGVLL 465
+CD +S GV++
Sbjct: 201 YGPECDEWSAGVMM 214
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 110/218 (50%), Gaps = 15/218 (6%)
Query: 280 LGTSSFGSVYKGTI-SDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYS 338
+G S G V T+ S G VA+K +L+ ++ +E ++R+ +H N++++ +SY
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 339 NPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCD 398
D +V+EF+ G+L + +H ++ + + + V AL LH + +IH D
Sbjct: 92 VGDELWVVMEFLEGGALTD-IVTHTR-MNEEQIAAVCLAVLQALSVLH----AQGVIHRD 145
Query: 399 LKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDV 458
+K +ILL + +SDFG + ++ R+ + T +MAPE + D+
Sbjct: 146 IKSDSILLTHDGRVKLSDFGFCAQV--SKEVPRRKXLVGTPYWMAPELISRLPYGPEVDI 203
Query: 459 YSYGVLLMETFTRKRPTDEMFIGEMSLR--RWVKESLP 494
+S G++++E + P + E L+ + ++++LP
Sbjct: 204 WSLGIMVIEMVDGEPP----YFNEPPLKAMKMIRDNLP 237
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 139/307 (45%), Gaps = 32/307 (10%)
Query: 272 DEFNECNLLGTSSFGSVYK-GTISDGTDVAIKVFNLQLERAFRS-FDSECEVLRNVRHRN 329
D+F + + LG + G V+K G +A K+ +L+++ A R+ E +VL
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 330 LIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLD-ILERLNIMIDVGSALEYLHNG 388
++ ++ + ++ +E M GSL++ L + IL +++I + G L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG--LTYLREK 123
Query: 389 HSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGL 448
H I+H D+KP+NIL++ + DFG+ G+ DS+ + + T YM+PE L
Sbjct: 124 HK---IMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSF-VGTRSYMSPER-L 175
Query: 449 EGI-VSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLVR 507
+G S + D++S G+ L+E + P E S P + E++D +V
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDS-------RPPMAIFELLDY-IVN 227
Query: 508 EEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVKFL---DDAAATNWR 564
E L DF C +++P R A LK++ V DA ++
Sbjct: 228 EPPPKLPSGVFSLEFQDFVNKCLIKNPAER-------ADLKQLMVHAFIKRSDAEEVDFA 280
Query: 565 NFHCVSL 571
+ C ++
Sbjct: 281 GWLCSTI 287
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 94/211 (44%), Gaps = 18/211 (8%)
Query: 272 DEFNECNLLGTSSFGSVYKGTISDGTDV-AIKVFNLQLERAFRSFDSEC-----EVLRNV 325
D F +LG SFG V + + D+ A+KV L+ + + D EC +L
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKV--LKKDVILQDDDVECTMTEKRILSLA 80
Query: 326 R-HRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEY 384
R H L ++ + PD V+EF+ G L + F + R ++ SAL +
Sbjct: 81 RNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARF-YAAEIISALMF 139
Query: 385 LHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTM-ATIGYMA 443
LH+ II+ DLK N+LLD ++DFG+ K EG + T T T Y+A
Sbjct: 140 LHDKG----IIYRDLKLDNVLLDHEGHCKLADFGMCK---EGICNGVTTATFCGTPDYIA 192
Query: 444 PEYGLEGIVSAKCDVYSYGVLLMETFTRKRP 474
PE E + D ++ GVLL E P
Sbjct: 193 PEILQEMLYGPAVDWWAMGVLLYEMLCGHAP 223
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 97/221 (43%), Gaps = 18/221 (8%)
Query: 251 EDFLPLAIWRRTSYLDIQRATDEFNECNLLGTSSFGSVYKGTISD-GTDVAIKVFNLQLE 309
EDFL W S Q D+F+ LGT SFG V + G A+K+ + Q
Sbjct: 24 EDFL--KKWETPSQNTAQ--LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV 79
Query: 310 RAFRSFD---SECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFL 366
+ + +E +L+ V L+K+ S+ + +V+E++ G + L F
Sbjct: 80 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS 139
Query: 367 DILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEG 426
+ R + EYLH S+ +I+ DLKP N+L+D+ V+DFG K +
Sbjct: 140 EPHARF-YAAQIVLTFEYLH----SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--- 191
Query: 427 EDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLME 467
R T Y+APE L + D ++ GVL+ +
Sbjct: 192 --KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQ 230
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 98/211 (46%), Gaps = 19/211 (9%)
Query: 271 TDEFNECNLLGTSSFGSVYKGTISDGT--DVAIKVFNLQLERAFRSFDSECEVL-RNVRH 327
TD + +G S+ SV K I T + A+K+ ++++ R E E+L R +H
Sbjct: 21 TDGYEVKEDIGVGSY-SVCKRCIHKATNXEFAVKI----IDKSKRDPTEEIEILLRYGQH 75
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
N+I + Y + + +V E G L + +F + E ++ + +EYLH
Sbjct: 76 PNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSE-REASAVLFTITKTVEYLH- 133
Query: 388 GHSSVHIIHCDLKPTNIL-LDEN---MVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
+ ++H DLKP+NIL +DE+ + DFG K L E+ + T T ++A
Sbjct: 134 ---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL-RAENGLLXTPCY-TANFVA 188
Query: 444 PEYGLEGIVSAKCDVYSYGVLLMETFTRKRP 474
PE A CD++S GVLL T P
Sbjct: 189 PEVLERQGYDAACDIWSLGVLLYTXLTGYTP 219
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 95/206 (46%), Gaps = 14/206 (6%)
Query: 273 EFNECNLLGTSSFGSVYK-GTISDGTDVAIKVFNLQLERAFRSFD---SECEVLRNVRHR 328
+F LGT SFG V+ + +G A+KV ++ + + E +L V H
Sbjct: 7 DFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHP 66
Query: 329 NLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNG 388
+I++ ++ + ++++++ G L L F + + + +V ALEYLH
Sbjct: 67 FIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKF-YAAEVCLALEYLH-- 123
Query: 389 HSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGL 448
S II+ DLKP NILLD+N ++DFG K + + + T Y+APE
Sbjct: 124 --SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXL-----CGTPDYIAPEVVS 176
Query: 449 EGIVSAKCDVYSYGVLLMETFTRKRP 474
+ D +S+G+L+ E P
Sbjct: 177 TKPYNKSIDWWSFGILIYEMLAGYTP 202
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 92/210 (43%), Gaps = 19/210 (9%)
Query: 266 DIQRATDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVF-----NLQLERAFRSFDSECE 320
+IQR E C +G FG V++G + A+ V N + F E
Sbjct: 11 EIQRERIELGRC--IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 68
Query: 321 VLRNVRHRNLIKILSSYS-NPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVG 379
+R H +++K++ + NP + +++E G L +L Y LD+ + +
Sbjct: 69 TMRQFDHPHIVKLIGVITENPVW--IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLS 126
Query: 380 SALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSV--RQTMTMA 437
+AL YL S +H D+ N+L+ N + DFG+ + + EDS + +
Sbjct: 127 TALAYLE----SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM---EDSTYYKASKGKL 179
Query: 438 TIGYMAPEYGLEGIVSAKCDVYSYGVLLME 467
I +MAPE ++ DV+ +GV + E
Sbjct: 180 PIKWMAPESINFRRFTSASDVWMFGVCMWE 209
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 105/207 (50%), Gaps = 14/207 (6%)
Query: 272 DEFNECNLLGTSSFGSVYK-GTISDGTDVAIKVFNLQLERAFRS-FDSECEVLRNVRHRN 329
D+F + + LG + G V+K G +A K+ +L+++ A R+ E +VL
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 127
Query: 330 LIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLD-ILERLNIMIDVGSALEYLHNG 388
++ ++ + ++ +E M GSL++ L + IL +++I + G L YL
Sbjct: 128 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG--LTYLREK 185
Query: 389 HSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGL 448
H I+H D+KP+NIL++ + DFG+ G+ DS+ + + T YM+PE L
Sbjct: 186 HK---IMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSF-VGTRSYMSPER-L 237
Query: 449 EGI-VSAKCDVYSYGVLLMETFTRKRP 474
+G S + D++S G+ L+E + P
Sbjct: 238 QGTHYSVQSDIWSMGLSLVEMAVGRYP 264
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 130/307 (42%), Gaps = 51/307 (16%)
Query: 270 ATDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLERAFRSFD-SECEVLRNVRH 327
++ +F + LG ++ +VYKG + G VA+K L E S E +++ ++H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYF-------LDILERLNIMIDVGS 380
N++++ + LV EFM N L+K++ S L++++ + G
Sbjct: 63 ENIVRLYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQG- 120
Query: 381 ALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIG 440
L + H I+H DLKP N+L+++ + DFG+ + G ++ + + T+
Sbjct: 121 -LAFCHENK----ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTF--SSEVVTLW 173
Query: 441 YMAPEYGLEG-IVSAKCDVYSYGVLLMETFTRK--------------------RPTDEMF 479
Y AP+ + S D++S G +L E T K P + ++
Sbjct: 174 YRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLW 233
Query: 480 IGEMSLRRW---VKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDM 536
L ++ +++ P L +V+ + K ++MDF +PDM
Sbjct: 234 PSVTKLPKYNPNIQQRPPRDLRQVLQPH---------TKEPLDGNLMDFLHGLLQLNPDM 284
Query: 537 RINMTDA 543
R++ A
Sbjct: 285 RLSAKQA 291
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 92/210 (43%), Gaps = 19/210 (9%)
Query: 266 DIQRATDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVF-----NLQLERAFRSFDSECE 320
+IQR E C +G FG V++G + A+ V N + F E
Sbjct: 34 EIQRERIELGRC--IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 91
Query: 321 VLRNVRHRNLIKILSSYS-NPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVG 379
+R H +++K++ + NP + +++E G L +L Y LD+ + +
Sbjct: 92 TMRQFDHPHIVKLIGVITENPVW--IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLS 149
Query: 380 SALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSV--RQTMTMA 437
+AL YL S +H D+ N+L+ N + DFG+ + + EDS + +
Sbjct: 150 TALAYLE----SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM---EDSTYYKASKGKL 202
Query: 438 TIGYMAPEYGLEGIVSAKCDVYSYGVLLME 467
I +MAPE ++ DV+ +GV + E
Sbjct: 203 PIKWMAPESINFRRFTSASDVWMFGVCMWE 232
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 92/210 (43%), Gaps = 19/210 (9%)
Query: 266 DIQRATDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVF-----NLQLERAFRSFDSECE 320
+IQR E C +G FG V++G + A+ V N + F E
Sbjct: 9 EIQRERIELGRC--IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 66
Query: 321 VLRNVRHRNLIKILSSYS-NPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVG 379
+R H +++K++ + NP + +++E G L +L Y LD+ + +
Sbjct: 67 TMRQFDHPHIVKLIGVITENPVW--IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLS 124
Query: 380 SALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSV--RQTMTMA 437
+AL YL S +H D+ N+L+ N + DFG+ + + EDS + +
Sbjct: 125 TALAYLE----SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM---EDSTYYKASKGKL 177
Query: 438 TIGYMAPEYGLEGIVSAKCDVYSYGVLLME 467
I +MAPE ++ DV+ +GV + E
Sbjct: 178 PIKWMAPESINFRRFTSASDVWMFGVCMWE 207
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 24/206 (11%)
Query: 274 FNECNLLGTSSFGSVYKGTISD-GTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIK 332
+ + ++G SFG VY+ + D G VAIK LQ +R F+ + E +++R + H N+++
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FK--NRELQIMRKLDHCNIVR 111
Query: 333 I----LSSYSNPD--FKALVLEFMPNG--SLEKWLYSHNYFLDILERLNIMIDVGSALEY 384
+ SS D + LVL+++P + + L ++ M + +L Y
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 171
Query: 385 LHNGHSSVHIIHCDLKPTNILLD-ENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
+H S I H D+KP N+LLD + V + DFG K L GE +V + + Y A
Sbjct: 172 IH----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRYYRA 224
Query: 444 PE--YGLEGIVSAKCDVYSYGVLLME 467
PE +G S+ DV+S G +L E
Sbjct: 225 PELIFGATDYTSS-IDVWSAGCVLAE 249
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 92/210 (43%), Gaps = 19/210 (9%)
Query: 266 DIQRATDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVF-----NLQLERAFRSFDSECE 320
+IQR E C +G FG V++G + A+ V N + F E
Sbjct: 6 EIQRERIELGRC--IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 321 VLRNVRHRNLIKILSSYS-NPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVG 379
+R H +++K++ + NP + +++E G L +L Y LD+ + +
Sbjct: 64 TMRQFDHPHIVKLIGVITENPVW--IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLS 121
Query: 380 SALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSV--RQTMTMA 437
+AL YL S +H D+ N+L+ N + DFG+ + + EDS + +
Sbjct: 122 TALAYLE----SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM---EDSTYYKASKGKL 174
Query: 438 TIGYMAPEYGLEGIVSAKCDVYSYGVLLME 467
I +MAPE ++ DV+ +GV + E
Sbjct: 175 PIKWMAPESINFRRFTSASDVWMFGVCMWE 204
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 92/210 (43%), Gaps = 19/210 (9%)
Query: 266 DIQRATDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVF-----NLQLERAFRSFDSECE 320
+IQR E C +G FG V++G + A+ V N + F E
Sbjct: 8 EIQRERIELGRC--IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 65
Query: 321 VLRNVRHRNLIKILSSYS-NPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVG 379
+R H +++K++ + NP + +++E G L +L Y LD+ + +
Sbjct: 66 TMRQFDHPHIVKLIGVITENPVW--IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLS 123
Query: 380 SALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSV--RQTMTMA 437
+AL YL S +H D+ N+L+ N + DFG+ + + EDS + +
Sbjct: 124 TALAYLE----SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM---EDSTYYKASKGKL 176
Query: 438 TIGYMAPEYGLEGIVSAKCDVYSYGVLLME 467
I +MAPE ++ DV+ +GV + E
Sbjct: 177 PIKWMAPESINFRRFTSASDVWMFGVCMWE 206
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 19/210 (9%)
Query: 266 DIQRATDEFNECNLLGTSSFGSVYKGTI----SDGTDVAIKVF-NLQLERAFRSFDSECE 320
+IQR E C +G FG V++G + VAIK N + F E
Sbjct: 6 EIQRERIELGRC--IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 321 VLRNVRHRNLIKILSSYS-NPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVG 379
+R H +++K++ + NP + +++E G L +L Y LD+ + +
Sbjct: 64 TMRQFDHPHIVKLIGVITENPVW--IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLS 121
Query: 380 SALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSV--RQTMTMA 437
+AL YL S +H D+ N+L+ N + DFG+ + + EDS + +
Sbjct: 122 TALAYLE----SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM---EDSTYYKASKGKL 174
Query: 438 TIGYMAPEYGLEGIVSAKCDVYSYGVLLME 467
I +MAPE ++ DV+ +GV + E
Sbjct: 175 PIKWMAPESINFRRFTSASDVWMFGVCMWE 204
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 97/221 (43%), Gaps = 18/221 (8%)
Query: 251 EDFLPLAIWRRTSYLDIQRATDEFNECNLLGTSSFGSVYKGTISD-GTDVAIKVFNLQLE 309
EDFL W S Q D+F+ LGT SFG V + G A+K+ + Q
Sbjct: 24 EDFL--KKWETPSQNTAQ--LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV 79
Query: 310 RAFRSFD---SECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFL 366
+ + +E +L+ V L+K+ S+ + +V+E++ G + L F
Sbjct: 80 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS 139
Query: 367 DILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEG 426
+ R + EYLH S+ +I+ DLKP N+++D+ V+DFG K +
Sbjct: 140 EPHARF-YAAQIVLTFEYLH----SLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRV--- 191
Query: 427 EDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLME 467
R T Y+APE + + D ++ GVL+ E
Sbjct: 192 --KGRTWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYE 230
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 98/223 (43%), Gaps = 44/223 (19%)
Query: 276 ECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNV--RHRNLIKI 333
EC +G +G V++G + G VA+K+F+ R +S+ E E+ V RH N++
Sbjct: 14 EC--VGKGRYGEVWRG-LWHGESVAVKIFS---SRDEQSWFRETEIYNTVLLRHDNILGF 67
Query: 334 LSSYSNPDFKALVLEFMPNGSLEKWLYSHNY----FLDILER--------LNIMIDVGSA 381
++S D + N S + WL +H + D L+R L + +
Sbjct: 68 IAS----DMTSR------NSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALRLAVSAACG 117
Query: 382 LEYLH----NGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGED--SVRQTMT 435
L +LH I H D K N+L+ N+ ++D G+ + +G D +
Sbjct: 118 LAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPR 177
Query: 436 MATIGYMAPEYGLEGIVSAKC-------DVYSYGVLLMETFTR 471
+ T YMAPE L+ + C D++++G++L E R
Sbjct: 178 VGTKRYMAPEV-LDEQIRTDCFESYKWTDIWAFGLVLWEIARR 219
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 117/274 (42%), Gaps = 29/274 (10%)
Query: 273 EFNECNLL---GTSSFGSVYKGTISDGTDVAIKVFNLQ--LERAFRSFDSECEVLRNVRH 327
+F + N L + G ++KG G D+ +KV ++ R R F+ EC LR H
Sbjct: 8 DFKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSH 66
Query: 328 RNLIKILSSYSNP--DFKALVLEFMPNGSLEKWLYS-HNYFLDILERLNIMIDVGSALEY 384
N++ +L + +P L+ + P GSL L+ N+ +D + + +D +
Sbjct: 67 PNVLPVLGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAF 126
Query: 385 LHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAP 444
LH I L ++ +DE+ A +S + + S + ++AP
Sbjct: 127 LHTLEPL--IPRHALNSRSVXIDEDXTARISXADV-------KFSFQSPGRXYAPAWVAP 177
Query: 445 E---YGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLR---RWVKESLPHGLT 498
E E D +S+ VLL E TR+ P ++ E+ + ++ ++P G++
Sbjct: 178 EALQKKPEDTNRRSADXWSFAVLLWELVTREVPFADLSNXEIGXKVALEGLRPTIPPGIS 237
Query: 499 EVVDANLVR----EEQAFSAKMDCILSIMDFALD 528
V + L + E+ A K D I+ I++ D
Sbjct: 238 PHV-SKLXKICXNEDPAKRPKFDXIVPILEKXQD 270
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 13/206 (6%)
Query: 280 LGTSSFGSVYKGTI---SDGTDVAIKVFNLQLERA-FRSFDSECEVLRNVRHRNLIKILS 335
LG +FGSV +G DVAIKV E+A E +++ + + +++++
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 336 SYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHII 395
+ LV+E G L K+L + + ++ V ++YL + +
Sbjct: 404 -VCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN----FV 458
Query: 396 HCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMAT--IGYMAPEYGLEGIVS 453
H +L N+LL A +SDFG+ K LG +DS + + + APE S
Sbjct: 459 HRNLAARNVLLVNRHYAKISDFGLSKALG-ADDSYYTARSAGKWPLKWYAPECINFRKFS 517
Query: 454 AKCDVYSYGVLLMETFTR-KRPTDEM 478
++ DV+SYGV + E + ++P +M
Sbjct: 518 SRSDVWSYGVTMWEALSYGQKPYKKM 543
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 107/228 (46%), Gaps = 37/228 (16%)
Query: 266 DIQRATDEFNECNLLGTSSFGSV----YKGTISDGTDVAIKVFNLQLERAF----RS--- 314
D++ +++ ++G +FG V +K T KV+ ++L F RS
Sbjct: 68 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTR--------KVYAMKLLSKFEMIKRSDSA 119
Query: 315 -FDSECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLN 373
F E +++ ++++ ++ + + +V+E+MP G L + NY D+ E+
Sbjct: 120 FFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM--SNY--DVPEKWA 175
Query: 374 --IMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGI-YKLLGEGEDSV 430
+V AL+ +H S+ IH D+KP N+LLD++ ++DFG K+ EG V
Sbjct: 176 RFYTAEVVLALDAIH----SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG--MV 229
Query: 431 RQTMTMATIGYMAPE----YGLEGIVSAKCDVYSYGVLLMETFTRKRP 474
R + T Y++PE G +G +CD +S GV L E P
Sbjct: 230 RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 107/228 (46%), Gaps = 37/228 (16%)
Query: 266 DIQRATDEFNECNLLGTSSFGSV----YKGTISDGTDVAIKVFNLQLERAF----RS--- 314
D++ +++ ++G +FG V +K T KV+ ++L F RS
Sbjct: 63 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTR--------KVYAMKLLSKFEMIKRSDSA 114
Query: 315 -FDSECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLN 373
F E +++ ++++ ++ + + +V+E+MP G L + NY D+ E+
Sbjct: 115 FFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM--SNY--DVPEKWA 170
Query: 374 --IMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGI-YKLLGEGEDSV 430
+V AL+ +H S+ IH D+KP N+LLD++ ++DFG K+ EG V
Sbjct: 171 RFYTAEVVLALDAIH----SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG--MV 224
Query: 431 RQTMTMATIGYMAPE----YGLEGIVSAKCDVYSYGVLLMETFTRKRP 474
R + T Y++PE G +G +CD +S GV L E P
Sbjct: 225 RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 272
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 95/204 (46%), Gaps = 21/204 (10%)
Query: 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLERAFRSFDS-----ECEVLRN 324
+ +N +LG SFG V K + A+KV N + + ++ D+ E E+L+
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVIN---KASAKNKDTSTILREVELLKK 77
Query: 325 VRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEY 384
+ H N++K+ + +V E G L + F + + I+ V S + Y
Sbjct: 78 LDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSE-HDAARIIKQVFSGITY 136
Query: 385 LHNGHSSVHIIHCDLKPTNILL---DENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGY 441
+H + I+H DLKP NILL +++ + DFG+ + + + + T Y
Sbjct: 137 MHKHN----IVHRDLKPENILLESKEKDCDIKIIDFGLSTCF---QQNTKMKDRIGTAYY 189
Query: 442 MAPEYGLEGIVSAKCDVYSYGVLL 465
+APE L G KCDV+S GV+L
Sbjct: 190 IAPEV-LRGTYDEKCDVWSAGVIL 212
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 95/204 (46%), Gaps = 21/204 (10%)
Query: 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLERAFRSFDS-----ECEVLRN 324
+ +N +LG SFG V K + A+KV N + + ++ D+ E E+L+
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVIN---KASAKNKDTSTILREVELLKK 77
Query: 325 VRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEY 384
+ H N++K+ + +V E G L + F + + I+ V S + Y
Sbjct: 78 LDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSE-HDAARIIKQVFSGITY 136
Query: 385 LHNGHSSVHIIHCDLKPTNILL---DENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGY 441
+H + I+H DLKP NILL +++ + DFG+ + + + + T Y
Sbjct: 137 MHKHN----IVHRDLKPENILLESKEKDCDIKIIDFGLSTCF---QQNTKMKDRIGTAYY 189
Query: 442 MAPEYGLEGIVSAKCDVYSYGVLL 465
+APE L G KCDV+S GV+L
Sbjct: 190 IAPEV-LRGTYDEKCDVWSAGVIL 212
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 92/210 (43%), Gaps = 19/210 (9%)
Query: 266 DIQRATDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVF-----NLQLERAFRSFDSECE 320
+IQR E C +G FG V++G + A+ V N + F E
Sbjct: 3 EIQRERIELGRC--IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 60
Query: 321 VLRNVRHRNLIKILSSYS-NPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVG 379
+R H +++K++ + NP + +++E G L +L Y LD+ + +
Sbjct: 61 TMRQFDHPHIVKLIGVITENPVW--IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLS 118
Query: 380 SALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSV--RQTMTMA 437
+AL YL S +H D+ N+L+ N + DFG+ + + EDS + +
Sbjct: 119 TALAYLE----SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM---EDSTYYKASKGKL 171
Query: 438 TIGYMAPEYGLEGIVSAKCDVYSYGVLLME 467
I +MAPE ++ DV+ +GV + E
Sbjct: 172 PIKWMAPESINFRRFTSASDVWMFGVCMWE 201
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 106/207 (51%), Gaps = 14/207 (6%)
Query: 272 DEFNECNLLGTSSFGSVYKGT-ISDGTDVAIKVFNLQLERAFRS-FDSECEVLRNVRHRN 329
D+F + + LG + G V+K + G +A K+ +L+++ A R+ E +VL
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 330 LIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLD-ILERLNIMIDVGSALEYLHNG 388
++ ++ + ++ +E M GSL++ L + IL +++I + G L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG--LTYLREK 123
Query: 389 HSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGL 448
H I+H D+KP+NIL++ + DFG+ G+ DS+ + + T YM+PE L
Sbjct: 124 HK---IMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSF-VGTRSYMSPER-L 175
Query: 449 EGI-VSAKCDVYSYGVLLMETFTRKRP 474
+G S + D++S G+ L+E + P
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 107/228 (46%), Gaps = 37/228 (16%)
Query: 266 DIQRATDEFNECNLLGTSSFGSV----YKGTISDGTDVAIKVFNLQLERAF----RS--- 314
D++ +++ ++G +FG V +K T KV+ ++L F RS
Sbjct: 68 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTR--------KVYAMKLLSKFEMIKRSDSA 119
Query: 315 -FDSECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLN 373
F E +++ ++++ ++ + + +V+E+MP G L + NY D+ E+
Sbjct: 120 FFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM--SNY--DVPEKWA 175
Query: 374 --IMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGI-YKLLGEGEDSV 430
+V AL+ +H S+ IH D+KP N+LLD++ ++DFG K+ EG V
Sbjct: 176 RFYTAEVVLALDAIH----SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG--MV 229
Query: 431 RQTMTMATIGYMAPE----YGLEGIVSAKCDVYSYGVLLMETFTRKRP 474
R + T Y++PE G +G +CD +S GV L E P
Sbjct: 230 RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 24/206 (11%)
Query: 274 FNECNLLGTSSFGSVYKGTISD-GTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIK 332
+ + ++G SFG VY+ + D G VAIK LQ +R F+ + E +++R + H N+++
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FK--NRELQIMRKLDHCNIVR 113
Query: 333 I----LSSYSNPD--FKALVLEFMPNG--SLEKWLYSHNYFLDILERLNIMIDVGSALEY 384
+ SS D + LVL+++P + + L ++ M + +L Y
Sbjct: 114 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 173
Query: 385 LHNGHSSVHIIHCDLKPTNILLD-ENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
+H S I H D+KP N+LLD + V + DFG K L GE +V + + Y A
Sbjct: 174 IH----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRA 226
Query: 444 PE--YGLEGIVSAKCDVYSYGVLLME 467
PE +G S+ DV+S G +L E
Sbjct: 227 PELIFGATDYTSS-IDVWSAGCVLAE 251
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 105/207 (50%), Gaps = 14/207 (6%)
Query: 272 DEFNECNLLGTSSFGSVYK-GTISDGTDVAIKVFNLQLERAFRS-FDSECEVLRNVRHRN 329
D+F + + LG + G V+K G +A K+ +L+++ A R+ E +VL
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 92
Query: 330 LIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLD-ILERLNIMIDVGSALEYLHNG 388
++ ++ + ++ +E M GSL++ L + IL +++I + G L YL
Sbjct: 93 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG--LTYLREK 150
Query: 389 HSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGL 448
H I+H D+KP+NIL++ + DFG+ G+ DS+ + + T YM+PE L
Sbjct: 151 HK---IMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSF-VGTRSYMSPER-L 202
Query: 449 EGI-VSAKCDVYSYGVLLMETFTRKRP 474
+G S + D++S G+ L+E + P
Sbjct: 203 QGTHYSVQSDIWSMGLSLVEMAVGRYP 229
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 101/206 (49%), Gaps = 24/206 (11%)
Query: 274 FNECNLLGTSSFGSVYKGTISD-GTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIK 332
+ + ++G SFG VY+ + D G VAIK + +AF+ + E +++R + H N+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQGKAFK--NRELQIMRKLDHCNIVR 77
Query: 333 I----LSSYSNPD--FKALVLEFMPNG--SLEKWLYSHNYFLDILERLNIMIDVGSALEY 384
+ SS D + LVL+++P + + L ++ M + +L Y
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 385 LHNGHSSVHIIHCDLKPTNILLD-ENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
+H S I H D+KP N+LLD + V + DFG K L GE +V + + Y A
Sbjct: 138 IH----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYRA 190
Query: 444 PE--YGLEGIVSAKCDVYSYGVLLME 467
PE +G S+ DV+S G +L E
Sbjct: 191 PELIFGATDYTSS-IDVWSAGCVLAE 215
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 106/207 (51%), Gaps = 14/207 (6%)
Query: 272 DEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLERAFRS-FDSECEVLRNVRHRN 329
D+F + + LG + G V+K + G +A K+ +L+++ A R+ E +VL
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 84
Query: 330 LIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLD-ILERLNIMIDVGSALEYLHNG 388
++ ++ + ++ +E M GSL++ L + IL +++I + G L YL
Sbjct: 85 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG--LTYLREK 142
Query: 389 HSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGL 448
H I+H D+KP+NIL++ + DFG+ G+ DS+ + + T YM+PE L
Sbjct: 143 HK---IMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSF-VGTRSYMSPER-L 194
Query: 449 EGI-VSAKCDVYSYGVLLMETFTRKRP 474
+G S + D++S G+ L+E + P
Sbjct: 195 QGTHYSVQSDIWSMGLSLVEMAVGRYP 221
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 101/206 (49%), Gaps = 24/206 (11%)
Query: 274 FNECNLLGTSSFGSVYKGTISD-GTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIK 332
+ + ++G SFG VY+ + D G VAIK + +AF+ + E +++R + H N+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQGKAFK--NRELQIMRKLDHCNIVR 77
Query: 333 I----LSSYSNPD--FKALVLEFMPNG--SLEKWLYSHNYFLDILERLNIMIDVGSALEY 384
+ SS D + LVL+++P + + L ++ M + +L Y
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 385 LHNGHSSVHIIHCDLKPTNILLD-ENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
+H S I H D+KP N+LLD + V + DFG K L GE +V + + Y A
Sbjct: 138 IH----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRA 190
Query: 444 PE--YGLEGIVSAKCDVYSYGVLLME 467
PE +G S+ DV+S G +L E
Sbjct: 191 PELIFGATDYTSS-IDVWSAGCVLAE 215
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 101/206 (49%), Gaps = 24/206 (11%)
Query: 274 FNECNLLGTSSFGSVYKGTISD-GTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIK 332
+ + ++G SFG VY+ + D G VAIK + ++ F+ + E +++R + H N+++
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIVR 96
Query: 333 I----LSSYSNPD--FKALVLEFMPNG--SLEKWLYSHNYFLDILERLNIMIDVGSALEY 384
+ SS D + LVL+++P + + L ++ M + +L Y
Sbjct: 97 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 156
Query: 385 LHNGHSSVHIIHCDLKPTNILLD-ENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
+H S I H D+KP N+LLD + V + DFG K L GE +V + + Y A
Sbjct: 157 IH----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYRA 209
Query: 444 PE--YGLEGIVSAKCDVYSYGVLLME 467
PE +G S+ DV+S G +L E
Sbjct: 210 PELIFGATDYTSS-IDVWSAGCVLAE 234
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 101/206 (49%), Gaps = 24/206 (11%)
Query: 274 FNECNLLGTSSFGSVYKGTISD-GTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIK 332
+ + ++G SFG VY+ + D G VAIK + ++ F+ + E +++R + H N+++
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIVR 85
Query: 333 I----LSSYSNPD--FKALVLEFMPNG--SLEKWLYSHNYFLDILERLNIMIDVGSALEY 384
+ SS D + LVL+++P + + L ++ M + +L Y
Sbjct: 86 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 145
Query: 385 LHNGHSSVHIIHCDLKPTNILLD-ENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
+H S I H D+KP N+LLD + V + DFG K L GE +V + + Y A
Sbjct: 146 IH----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYRA 198
Query: 444 PE--YGLEGIVSAKCDVYSYGVLLME 467
PE +G S+ DV+S G +L E
Sbjct: 199 PELIFGATDYTSS-IDVWSAGCVLAE 223
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 101/206 (49%), Gaps = 24/206 (11%)
Query: 274 FNECNLLGTSSFGSVYKGTISD-GTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIK 332
+ + ++G SFG VY+ + D G VAIK + ++ F+ + E +++R + H N+++
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIVR 89
Query: 333 I----LSSYSNPD--FKALVLEFMPNG--SLEKWLYSHNYFLDILERLNIMIDVGSALEY 384
+ SS D + LVL+++P + + L ++ M + +L Y
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 149
Query: 385 LHNGHSSVHIIHCDLKPTNILLD-ENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
+H S I H D+KP N+LLD + V + DFG K L GE +V + + Y A
Sbjct: 150 IH----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYRA 202
Query: 444 PE--YGLEGIVSAKCDVYSYGVLLME 467
PE +G S+ DV+S G +L E
Sbjct: 203 PELIFGATDYTSS-IDVWSAGCVLAE 227
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 112/257 (43%), Gaps = 36/257 (14%)
Query: 249 DHEDFLPLAIWRRTSYLDIQRATDEFNECNLLGTSSFGSVYKGTISD-GTDVAIKVFNLQ 307
+ + F W+ L+I ++F+ ++G FG VY +D G A+K + +
Sbjct: 167 ESDKFTRFCQWKNVE-LNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKK 225
Query: 308 LERAFRSFDSECEVLRNVRHRNLIKILS------------SYSNPDFKALVLEFMPNGSL 355
R + E L + R ++ ++S ++ PD + +L+ M G L
Sbjct: 226 -----RIKMKQGETL-ALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDL 279
Query: 356 EKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVS 415
L H F + R ++ LE++HN +++ DLKP NILLDE+ +S
Sbjct: 280 HYHLSQHGVFSEADMRF-YAAEIILGLEHMHNRF----VVYRDLKPANILLDEHGHVRIS 334
Query: 416 DFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIV-SAKCDVYSYGVLLME------T 468
D G+ + + ++ T GYMAPE +G+ + D +S G +L +
Sbjct: 335 DLGLACDFSKKKPHA----SVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
Query: 469 FTRKRPTDEMFIGEMSL 485
F + + D+ I M+L
Sbjct: 391 FRQHKTKDKHEIDRMTL 407
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 97/205 (47%), Gaps = 23/205 (11%)
Query: 271 TDEFNECNLLGTSSFGSVYK--GTISDGTDVAIKVFNLQLERAFRSFDS-----ECEVLR 323
+ +N +LG SFG V K I+ + A+KV N + + ++ D+ E E+L+
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQ-QEYAVKVIN---KASAKNKDTSTILREVELLK 76
Query: 324 NVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALE 383
+ H N++K+ + +V E G L + F + + I+ V S +
Sbjct: 77 KLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSE-HDAARIIKQVFSGIT 135
Query: 384 YLHNGHSSVHIIHCDLKPTNILL---DENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIG 440
Y+H + I+H DLKP NILL +++ + DFG+ + + + + T
Sbjct: 136 YMHKHN----IVHRDLKPENILLESKEKDCDIKIIDFGLSTCF---QQNTKMKDRIGTAY 188
Query: 441 YMAPEYGLEGIVSAKCDVYSYGVLL 465
Y+APE L G KCDV+S GV+L
Sbjct: 189 YIAPEV-LRGTYDEKCDVWSAGVIL 212
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 24/206 (11%)
Query: 274 FNECNLLGTSSFGSVYKGTISD-GTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIK 332
+ + ++G SFG VY+ + D G VAIK LQ +R F+ + E +++R + H N+++
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FK--NRELQIMRKLDHCNIVR 111
Query: 333 I----LSSYSNPD--FKALVLEFMPNG--SLEKWLYSHNYFLDILERLNIMIDVGSALEY 384
+ SS D + LVL+++P + + L ++ M + +L Y
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 171
Query: 385 LHNGHSSVHIIHCDLKPTNILLD-ENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
+H S I H D+KP N+LLD + V + DFG K L GE +V + + Y A
Sbjct: 172 IH----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRA 224
Query: 444 PE--YGLEGIVSAKCDVYSYGVLLME 467
PE +G S+ DV+S G +L E
Sbjct: 225 PELIFGATDYTSS-IDVWSAGCVLAE 249
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 101/206 (49%), Gaps = 24/206 (11%)
Query: 274 FNECNLLGTSSFGSVYKGTISD-GTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIK 332
+ + ++G SFG VY+ + D G VAIK + ++ F+ + E +++R + H N+++
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIVR 89
Query: 333 I----LSSYSNPD--FKALVLEFMPNG--SLEKWLYSHNYFLDILERLNIMIDVGSALEY 384
+ SS D + LVL+++P + + L ++ M + +L Y
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 149
Query: 385 LHNGHSSVHIIHCDLKPTNILLD-ENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
+H S I H D+KP N+LLD + V + DFG K L GE +V + + Y A
Sbjct: 150 IH----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYRA 202
Query: 444 PE--YGLEGIVSAKCDVYSYGVLLME 467
PE +G S+ DV+S G +L E
Sbjct: 203 PELIFGATDYTSS-IDVWSAGCVLAE 227
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 101/206 (49%), Gaps = 24/206 (11%)
Query: 274 FNECNLLGTSSFGSVYKGTISD-GTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIK 332
+ + ++G SFG VY+ + D G VAIK + +AF+ + E +++R + H N+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQGKAFK--NRELQIMRKLDHCNIVR 77
Query: 333 I----LSSYSNPD--FKALVLEFMPNG--SLEKWLYSHNYFLDILERLNIMIDVGSALEY 384
+ SS D + LVL+++P + + L ++ M + +L Y
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 385 LHNGHSSVHIIHCDLKPTNILLD-ENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
+H S I H D+KP N+LLD + V + DFG K L GE +V + + Y A
Sbjct: 138 IH----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRA 190
Query: 444 PE--YGLEGIVSAKCDVYSYGVLLME 467
PE +G S+ DV+S G +L E
Sbjct: 191 PELIFGATDYTSS-IDVWSAGCVLAE 215
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 93/197 (47%), Gaps = 11/197 (5%)
Query: 279 LLGTSSFGSVYKGTISD--GTDVAIKVFNLQLERAF---RSFDSECEVLRNVRHRNLIKI 333
+LG FG VY+G ++ G + + V + + F SE +++N+ H +++K+
Sbjct: 31 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 90
Query: 334 LSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVH 393
+ + +++E P G L +L + L +L + + + A+ YL S++
Sbjct: 91 IGIIEE-EPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE----SIN 145
Query: 394 IIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVS 453
+H D+ NIL+ + DFG+ + + E ED + ++T I +M+PE +
Sbjct: 146 CVHRDIAVRNILVASPECVKLGDFGLSRYI-EDEDYYKASVTRLPIKWMSPESINFRRFT 204
Query: 454 AKCDVYSYGVLLMETFT 470
DV+ + V + E +
Sbjct: 205 TASDVWMFAVCMWEILS 221
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 112/257 (43%), Gaps = 36/257 (14%)
Query: 249 DHEDFLPLAIWRRTSYLDIQRATDEFNECNLLGTSSFGSVYKGTISD-GTDVAIKVFNLQ 307
+ + F W+ L+I ++F+ ++G FG VY +D G A+K + +
Sbjct: 166 ESDKFTRFCQWKNVE-LNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKK 224
Query: 308 LERAFRSFDSECEVLRNVRHRNLIKILS------------SYSNPDFKALVLEFMPNGSL 355
R + E L + R ++ ++S ++ PD + +L+ M G L
Sbjct: 225 -----RIKMKQGETL-ALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDL 278
Query: 356 EKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVS 415
L H F + R ++ LE++HN +++ DLKP NILLDE+ +S
Sbjct: 279 HYHLSQHGVFSEADMRF-YAAEIILGLEHMHNRF----VVYRDLKPANILLDEHGHVRIS 333
Query: 416 DFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIV-SAKCDVYSYGVLLME------T 468
D G+ + + ++ T GYMAPE +G+ + D +S G +L +
Sbjct: 334 DLGLACDFSKKKPHA----SVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 389
Query: 469 FTRKRPTDEMFIGEMSL 485
F + + D+ I M+L
Sbjct: 390 FRQHKTKDKHEIDRMTL 406
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 112/257 (43%), Gaps = 36/257 (14%)
Query: 249 DHEDFLPLAIWRRTSYLDIQRATDEFNECNLLGTSSFGSVYKGTISD-GTDVAIKVFNLQ 307
+ + F W+ L+I ++F+ ++G FG VY +D G A+K + +
Sbjct: 167 ESDKFTRFCQWKNVE-LNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKK 225
Query: 308 LERAFRSFDSECEVLRNVRHRNLIKILS------------SYSNPDFKALVLEFMPNGSL 355
R + E L + R ++ ++S ++ PD + +L+ M G L
Sbjct: 226 -----RIKMKQGETL-ALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDL 279
Query: 356 EKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVS 415
L H F + R ++ LE++HN +++ DLKP NILLDE+ +S
Sbjct: 280 HYHLSQHGVFSEADMRF-YAAEIILGLEHMHNRF----VVYRDLKPANILLDEHGHVRIS 334
Query: 416 DFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIV-SAKCDVYSYGVLLME------T 468
D G+ + + ++ T GYMAPE +G+ + D +S G +L +
Sbjct: 335 DLGLACDFSKKKPHA----SVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
Query: 469 FTRKRPTDEMFIGEMSL 485
F + + D+ I M+L
Sbjct: 391 FRQHKTKDKHEIDRMTL 407
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 112/257 (43%), Gaps = 36/257 (14%)
Query: 249 DHEDFLPLAIWRRTSYLDIQRATDEFNECNLLGTSSFGSVYKGTISD-GTDVAIKVFNLQ 307
+ + F W+ L+I ++F+ ++G FG VY +D G A+K + +
Sbjct: 167 ESDKFTRFCQWKNVE-LNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKK 225
Query: 308 LERAFRSFDSECEVLRNVRHRNLIKILS------------SYSNPDFKALVLEFMPNGSL 355
R + E L + R ++ ++S ++ PD + +L+ M G L
Sbjct: 226 -----RIKMKQGETL-ALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDL 279
Query: 356 EKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVS 415
L H F + R ++ LE++HN +++ DLKP NILLDE+ +S
Sbjct: 280 HYHLSQHGVFSEADMRF-YAAEIILGLEHMHNRF----VVYRDLKPANILLDEHGHVRIS 334
Query: 416 DFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIV-SAKCDVYSYGVLLME------T 468
D G+ + + ++ T GYMAPE +G+ + D +S G +L +
Sbjct: 335 DLGLACDFSKKKPHA----SVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
Query: 469 FTRKRPTDEMFIGEMSL 485
F + + D+ I M+L
Sbjct: 391 FRQHKTKDKHEIDRMTL 407
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 106/207 (51%), Gaps = 14/207 (6%)
Query: 272 DEFNECNLLGTSSFGSVYKGT-ISDGTDVAIKVFNLQLERAFRS-FDSECEVLRNVRHRN 329
D+F + + LG + G V+K + G +A K+ +L+++ A R+ E +VL
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 330 LIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLD-ILERLNIMIDVGSALEYLHNG 388
++ ++ + ++ +E M GSL++ L + IL +++I + G L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG--LTYLREK 123
Query: 389 HSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGL 448
H I+H D+KP+NIL++ + DFG+ G+ DS+ + + T YM+PE L
Sbjct: 124 HK---IMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSF-VGTRSYMSPER-L 175
Query: 449 EGI-VSAKCDVYSYGVLLMETFTRKRP 474
+G S + D++S G+ L+E + P
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 24/206 (11%)
Query: 274 FNECNLLGTSSFGSVYKGTISD-GTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIK 332
+ + ++G SFG VY+ + D G VAIK LQ +R F+ + E +++R + H N+++
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FK--NRELQIMRKLDHCNIVR 115
Query: 333 I----LSSYSNPD--FKALVLEFMPNG--SLEKWLYSHNYFLDILERLNIMIDVGSALEY 384
+ SS D + LVL+++P + + L ++ M + +L Y
Sbjct: 116 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 175
Query: 385 LHNGHSSVHIIHCDLKPTNILLD-ENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
+H S I H D+KP N+LLD + V + DFG K L GE +V + + Y A
Sbjct: 176 IH----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRA 228
Query: 444 PE--YGLEGIVSAKCDVYSYGVLLME 467
PE +G S+ DV+S G +L E
Sbjct: 229 PELIFGATDYTSS-IDVWSAGCVLAE 253
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 105/233 (45%), Gaps = 17/233 (7%)
Query: 240 CRNRNTKKSDHEDFLPLAIWRRTSYLDIQ----RATDEFNECNLLGTSSFGSVYKGT-IS 294
R + T S++++++ IW++ ++ D ++ LGT +FG V++ T +
Sbjct: 122 VRGKGTVSSNYDNYV-FDIWKQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERA 180
Query: 295 DGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGS 354
G + A K E + E + + +RH L+ + ++ + + ++ EFM G
Sbjct: 181 TGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGE 240
Query: 355 L-EKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAH 413
L EK HN + E + M V L ++H + +H DLKP NI+
Sbjct: 241 LFEKVADEHNKMSED-EAVEYMRQVCKGLCHMHEN----NYVHLDLKPENIMFTTKRSNE 295
Query: 414 VS--DFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVL 464
+ DFG+ L + + SV+ +T T + APE V D++S GVL
Sbjct: 296 LKLIDFGLTAHL-DPKQSVK--VTTGTAEFAAPEVAEGKPVGYYTDMWSVGVL 345
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 101/206 (49%), Gaps = 24/206 (11%)
Query: 274 FNECNLLGTSSFGSVYKGTISD-GTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIK 332
+ + ++G SFG VY+ + D G VAIK + ++ F+ + E +++R + H N+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIVR 77
Query: 333 I----LSSYSNPD--FKALVLEFMPNG--SLEKWLYSHNYFLDILERLNIMIDVGSALEY 384
+ SS D + LVL+++P + + L ++ M + +L Y
Sbjct: 78 LRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 385 LHNGHSSVHIIHCDLKPTNILLD-ENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
+H S I H D+KP N+LLD + V + DFG K L GE +V + + Y A
Sbjct: 138 IH----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYRA 190
Query: 444 PE--YGLEGIVSAKCDVYSYGVLLME 467
PE +G S+ DV+S G +L E
Sbjct: 191 PELIFGATDYTSS-IDVWSAGCVLAE 215
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 24/206 (11%)
Query: 274 FNECNLLGTSSFGSVYKGTISD-GTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIK 332
+ + ++G SFG VY+ + D G VAIK LQ +R F+ + E +++R + H N+++
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FK--NRELQIMRKLDHCNIVR 105
Query: 333 I----LSSYSNPD--FKALVLEFMPNG--SLEKWLYSHNYFLDILERLNIMIDVGSALEY 384
+ SS D + LVL+++P + + L ++ M + +L Y
Sbjct: 106 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 165
Query: 385 LHNGHSSVHIIHCDLKPTNILLD-ENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
+H S I H D+KP N+LLD + V + DFG K L GE +V + + Y A
Sbjct: 166 IH----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRA 218
Query: 444 PE--YGLEGIVSAKCDVYSYGVLLME 467
PE +G S+ DV+S G +L E
Sbjct: 219 PELIFGATDYTSS-IDVWSAGCVLAE 243
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 101/206 (49%), Gaps = 24/206 (11%)
Query: 274 FNECNLLGTSSFGSVYKGTISD-GTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIK 332
+ + ++G SFG VY+ + D G VAIK + ++ F+ + E +++R + H N+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIVR 77
Query: 333 I----LSSYSNPD--FKALVLEFMPNG--SLEKWLYSHNYFLDILERLNIMIDVGSALEY 384
+ SS D + LVL+++P + + L ++ M + +L Y
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 385 LHNGHSSVHIIHCDLKPTNILLD-ENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
+H S I H D+KP N+LLD + V + DFG K L GE +V + + Y A
Sbjct: 138 IH----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYRA 190
Query: 444 PE--YGLEGIVSAKCDVYSYGVLLME 467
PE +G S+ DV+S G +L E
Sbjct: 191 PELIFGATDYTSS-IDVWSAGCVLAE 215
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 101/206 (49%), Gaps = 24/206 (11%)
Query: 274 FNECNLLGTSSFGSVYKGTISD-GTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIK 332
+ + ++G SFG VY+ + D G VAIK + ++ F+ + E +++R + H N+++
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIVR 78
Query: 333 I----LSSYSNPD--FKALVLEFMPNG--SLEKWLYSHNYFLDILERLNIMIDVGSALEY 384
+ SS D + LVL+++P + + L ++ M + +L Y
Sbjct: 79 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 138
Query: 385 LHNGHSSVHIIHCDLKPTNILLD-ENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
+H S I H D+KP N+LLD + V + DFG K L GE +V + + Y A
Sbjct: 139 IH----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYRA 191
Query: 444 PE--YGLEGIVSAKCDVYSYGVLLME 467
PE +G S+ DV+S G +L E
Sbjct: 192 PELIFGATDYTSS-IDVWSAGCVLAE 216
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 91/208 (43%), Gaps = 15/208 (7%)
Query: 266 DIQRATDEFNECNLLGTSSFGSVYKGTI----SDGTDVAIKVF-NLQLERAFRSFDSECE 320
+IQR E C +G FG V++G + VAIK N + F E
Sbjct: 6 EIQRERIELGRC--IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 321 VLRNVRHRNLIKILSSYS-NPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVG 379
+R H +++K++ + NP + +++E G L +L + LD+ + +
Sbjct: 64 TMRQFDHPHIVKLIGVITENPVW--IIMELCTLGELRSFLQVRKFSLDLASLILYAYQLS 121
Query: 380 SALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATI 439
+AL YL S +H D+ N+L+ N + DFG+ + + E + + I
Sbjct: 122 TALAYLE----SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTXXKASKGKLPI 176
Query: 440 GYMAPEYGLEGIVSAKCDVYSYGVLLME 467
+MAPE ++ DV+ +GV + E
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWE 204
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 101/206 (49%), Gaps = 24/206 (11%)
Query: 274 FNECNLLGTSSFGSVYKGTISD-GTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIK 332
+ + ++G SFG VY+ + D G VAIK + ++ F+ + E +++R + H N+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIVR 77
Query: 333 I----LSSYSNPD--FKALVLEFMPNG--SLEKWLYSHNYFLDILERLNIMIDVGSALEY 384
+ SS D + LVL+++P + + L ++ M + +L Y
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 385 LHNGHSSVHIIHCDLKPTNILLD-ENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
+H S I H D+KP N+LLD + V + DFG K L GE +V + + Y A
Sbjct: 138 IH----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYRA 190
Query: 444 PE--YGLEGIVSAKCDVYSYGVLLME 467
PE +G S+ DV+S G +L E
Sbjct: 191 PELIFGATDYTSS-IDVWSAGCVLAE 215
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 101/206 (49%), Gaps = 24/206 (11%)
Query: 274 FNECNLLGTSSFGSVYKGTISD-GTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIK 332
+ + ++G SFG VY+ + D G VAIK + ++ F+ + E +++R + H N+++
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIVR 81
Query: 333 I----LSSYSNPD--FKALVLEFMPNG--SLEKWLYSHNYFLDILERLNIMIDVGSALEY 384
+ SS D + LVL+++P + + L ++ M + +L Y
Sbjct: 82 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 141
Query: 385 LHNGHSSVHIIHCDLKPTNILLD-ENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
+H S I H D+KP N+LLD + V + DFG K L GE +V + + Y A
Sbjct: 142 IH----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYRA 194
Query: 444 PE--YGLEGIVSAKCDVYSYGVLLME 467
PE +G S+ DV+S G +L E
Sbjct: 195 PELIFGATDYTSS-IDVWSAGCVLAE 219
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 24/206 (11%)
Query: 274 FNECNLLGTSSFGSVYKGTISD-GTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIK 332
+ + ++G SFG VY+ + D G VAIK LQ +R F+ + E +++R + H N+++
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FK--NRELQIMRKLDHCNIVR 156
Query: 333 I----LSSYSNPD--FKALVLEFMPNG--SLEKWLYSHNYFLDILERLNIMIDVGSALEY 384
+ SS D + LVL+++P + + L ++ M + +L Y
Sbjct: 157 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 216
Query: 385 LHNGHSSVHIIHCDLKPTNILLD-ENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
+H S I H D+KP N+LLD + V + DFG K L GE +V + + Y A
Sbjct: 217 IH----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRA 269
Query: 444 PE--YGLEGIVSAKCDVYSYGVLLME 467
PE +G S+ DV+S G +L E
Sbjct: 270 PELIFGATDYTSS-IDVWSAGCVLAE 294
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 99/208 (47%), Gaps = 10/208 (4%)
Query: 269 RATDEFNECNLLGTSSFG-SVYKGTISDGTDVAIKVFNLQLERAFRSFDS--ECEVLRNV 325
++ +++ +G SFG ++ + DG IK N+ + +S E VL N+
Sbjct: 21 QSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANM 80
Query: 326 RHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILER-LNIMIDVGSALEY 384
+H N+++ S+ +V+++ G L K + + L ++ L+ + + AL++
Sbjct: 81 KHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKH 140
Query: 385 LHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAP 444
+H+ I+H D+K NI L ++ + DFGI ++L + R + T Y++P
Sbjct: 141 VHDRK----ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELAR--ACIGTPYYLSP 194
Query: 445 EYGLEGIVSAKCDVYSYGVLLMETFTRK 472
E + K D+++ G +L E T K
Sbjct: 195 EICENKPYNNKSDIWALGCVLYELCTLK 222
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 106/207 (51%), Gaps = 14/207 (6%)
Query: 272 DEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLERAFRS-FDSECEVLRNVRHRN 329
D+F + + LG + G V+K + G +A K+ +L+++ A R+ E +VL
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 330 LIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLD-ILERLNIMIDVGSALEYLHNG 388
++ ++ + ++ +E M GSL++ L + IL +++I + G L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG--LTYLREK 123
Query: 389 HSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGL 448
H I+H D+KP+NIL++ + DFG+ G+ DS+ + + T YM+PE L
Sbjct: 124 HK---IMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSF-VGTRSYMSPER-L 175
Query: 449 EGI-VSAKCDVYSYGVLLMETFTRKRP 474
+G S + D++S G+ L+E + P
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 106/207 (51%), Gaps = 14/207 (6%)
Query: 272 DEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLERAFRS-FDSECEVLRNVRHRN 329
D+F + + LG + G V+K + G +A K+ +L+++ A R+ E +VL
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 330 LIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLD-ILERLNIMIDVGSALEYLHNG 388
++ ++ + ++ +E M GSL++ L + IL +++I + G L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG--LTYLREK 123
Query: 389 HSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGL 448
H I+H D+KP+NIL++ + DFG+ G+ DS+ + + T YM+PE L
Sbjct: 124 HK---IMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSF-VGTRSYMSPER-L 175
Query: 449 EGI-VSAKCDVYSYGVLLMETFTRKRP 474
+G S + D++S G+ L+E + P
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 93/197 (47%), Gaps = 11/197 (5%)
Query: 279 LLGTSSFGSVYKGTISD--GTDVAIKVFNLQLERAF---RSFDSECEVLRNVRHRNLIKI 333
+LG FG VY+G ++ G + + V + + F SE +++N+ H +++K+
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 78
Query: 334 LSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVH 393
+ + +++E P G L +L + L +L + + + A+ YL S++
Sbjct: 79 IGIIEE-EPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE----SIN 133
Query: 394 IIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVS 453
+H D+ NIL+ + DFG+ + + E ED + ++T I +M+PE +
Sbjct: 134 CVHRDIAVRNILVASPECVKLGDFGLSRYI-EDEDYYKASVTRLPIKWMSPESINFRRFT 192
Query: 454 AKCDVYSYGVLLMETFT 470
DV+ + V + E +
Sbjct: 193 TASDVWMFAVCMWEILS 209
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 24/206 (11%)
Query: 274 FNECNLLGTSSFGSVYKGTISD-GTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIK 332
+ + ++G SFG VY+ + D G VAIK LQ +R F+ + E +++R + H N+++
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FK--NRELQIMRKLDHCNIVR 82
Query: 333 I----LSSYSNPD--FKALVLEFMPNG--SLEKWLYSHNYFLDILERLNIMIDVGSALEY 384
+ SS D + LVL+++P + + L ++ M + +L Y
Sbjct: 83 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 142
Query: 385 LHNGHSSVHIIHCDLKPTNILLD-ENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
+H S I H D+KP N+LLD + V + DFG K L GE +V + + Y A
Sbjct: 143 IH----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRA 195
Query: 444 PE--YGLEGIVSAKCDVYSYGVLLME 467
PE +G S+ DV+S G +L E
Sbjct: 196 PELIFGATDYTSS-IDVWSAGCVLAE 220
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 99/216 (45%), Gaps = 27/216 (12%)
Query: 278 NLLGTSSFGSVYKGTISDGTDV-AIKVFN-LQLERAFRSFDSECEVLRNVRHRNLIKILS 335
++LG + +V++G D+ AIKVFN + R E EVL+ + H+N++K+ +
Sbjct: 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFA 74
Query: 336 --SYSNPDFKALVLEFMPNGSLEKWLY--SHNYFLDILERLNIMIDVGSALEYL-HNGHS 390
+ K L++EF P GSL L S+ Y L E L ++ DV + +L NG
Sbjct: 75 IEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG-- 132
Query: 391 SVHIIHCDLKPTNILL----DENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEY 446
I+H ++KP NI+ D V ++DFG + L ED + T Y+ P+
Sbjct: 133 ---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL---EDDEQFVXLYGTEEYLHPDM 186
Query: 447 GLEGIV--------SAKCDVYSYGVLLMETFTRKRP 474
++ A D++S GV T P
Sbjct: 187 YERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 96/221 (43%), Gaps = 18/221 (8%)
Query: 251 EDFLPLAIWRRTSYLDIQRATDEFNECNLLGTSSFGSVYKGTISD-GTDVAIKVFNLQLE 309
EDFL W S Q D+F+ LGT SFG V + G A+K+ + Q
Sbjct: 24 EDFL--KKWETPSQNTAQ--LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV 79
Query: 310 RAFRSFD---SECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFL 366
+ + +E +L+ V L+K+ S+ + +V+E++ G + L F
Sbjct: 80 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS 139
Query: 367 DILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEG 426
+ R + EYLH S+ +I+ DLKP N+L+D+ V+DFG K +
Sbjct: 140 EPHARF-YAAQIVLTFEYLH----SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--- 191
Query: 427 EDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLME 467
R T Y+AP L + D ++ GVL+ E
Sbjct: 192 --KGRTWXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYE 230
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 93/197 (47%), Gaps = 11/197 (5%)
Query: 279 LLGTSSFGSVYKGTISD--GTDVAIKVFNLQLERAF---RSFDSECEVLRNVRHRNLIKI 333
+LG FG VY+G ++ G + + V + + F SE +++N+ H +++K+
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 74
Query: 334 LSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVH 393
+ + +++E P G L +L + L +L + + + A+ YL S++
Sbjct: 75 IGIIEE-EPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE----SIN 129
Query: 394 IIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVS 453
+H D+ NIL+ + DFG+ + + E ED + ++T I +M+PE +
Sbjct: 130 CVHRDIAVRNILVASPECVKLGDFGLSRYI-EDEDYYKASVTRLPIKWMSPESINFRRFT 188
Query: 454 AKCDVYSYGVLLMETFT 470
DV+ + V + E +
Sbjct: 189 TASDVWMFAVCMWEILS 205
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 101/206 (49%), Gaps = 24/206 (11%)
Query: 274 FNECNLLGTSSFGSVYKGTISD-GTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIK 332
+ + ++G SFG VY+ + D G VAIK + ++ F+ + E +++R + H N+++
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIVR 90
Query: 333 I----LSSYSNPD--FKALVLEFMPNG--SLEKWLYSHNYFLDILERLNIMIDVGSALEY 384
+ SS D + LVL+++P + + L ++ M + +L Y
Sbjct: 91 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 150
Query: 385 LHNGHSSVHIIHCDLKPTNILLD-ENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
+H S I H D+KP N+LLD + V + DFG K L GE +V + + Y A
Sbjct: 151 IH----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRA 203
Query: 444 PE--YGLEGIVSAKCDVYSYGVLLME 467
PE +G S+ DV+S G +L E
Sbjct: 204 PELIFGATDYTSS-IDVWSAGCVLAE 228
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 12/205 (5%)
Query: 280 LGTSSFGSVYKGTISDGTDVAI-KVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYS 338
LG +FG VYK + + +A KV + + E + E ++L + H N++K+L ++
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 339 NPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCD 398
+ +++EF G+++ + L + + AL YLH+ IIH D
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN----KIIHRD 160
Query: 399 LKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGL-----EGIVS 453
LK NIL + ++DFG+ R+ + T +MAPE + +
Sbjct: 161 LKAGNILFTLDGDIKLADFGVSA--KNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYD 218
Query: 454 AKCDVYSYGVLLMETFTRKRPTDEM 478
K DV+S G+ L+E + P E+
Sbjct: 219 YKADVWSLGITLIEMAEIEPPHHEL 243
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 272 DEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNL--QLERAFRSFDSECEVLRNVRHR 328
+ F + +G ++G VYK G VA+K L + E + E +L+ + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 329 NLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID-VGSALEYLHN 387
N++K+L + LV EF+ + L+K F+D I + + S L L
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKK-------FMDASALTGIPLPLIKSYLFQLLQ 114
Query: 388 GHSSVH---IIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQ-TMTMATIGYMA 443
G S H ++H DLKP N+L++ ++DFG+ + G VR T + T+ Y A
Sbjct: 115 GLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV---PVRTYTHEVVTLWYRA 171
Query: 444 PEYGLE-GIVSAKCDVYSYGVLLMETFTRK 472
PE L S D++S G + E TR+
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 115/261 (44%), Gaps = 45/261 (17%)
Query: 245 TKKSDHEDFLPLAIWRRTSY---LDIQRATDEFNECNLLGTSSFGSVYKGT---ISD--- 295
T SD+E F +R Y + R EF + +LG+ +FG V T IS
Sbjct: 19 TGSSDNEYFY--VDFREYEYDLKWEFPRENLEFGK--VLGSGAFGKVMNATAYGISKTGV 74
Query: 296 GTDVAIKVFNLQLERAFR-SFDSECEVLRNV-RHRNLIKILSS--YSNPDFKALVLEFMP 351
VA+K+ + + + R + SE +++ + H N++ +L + S P + L+ E+
Sbjct: 75 SIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIY--LIFEYCC 132
Query: 352 NGSLEKWL-------------YSHNYFLDILERLNIMI---------DVGSALEYLHNGH 389
G L +L Y + L+ E LN++ V +E+L
Sbjct: 133 YGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS 192
Query: 390 SSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLE 449
+H DL N+L+ V + DFG+ + + + V + + +MAPE E
Sbjct: 193 C----VHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFE 248
Query: 450 GIVSAKCDVYSYGVLLMETFT 470
GI + K DV+SYG+LL E F+
Sbjct: 249 GIYTIKSDVWSYGILLWEIFS 269
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 95/212 (44%), Gaps = 26/212 (12%)
Query: 280 LGTSSFGSVYKGTISDGTDVAI-KVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYS 338
LG +FG VYK + + +A KV + + E + E ++L + H N++K+L ++
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 339 NPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCD 398
+ +++EF G+++ + L + + AL YLH+ IIH D
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN----KIIHRD 160
Query: 399 LKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMT-------MATIGYMAPEYGL--- 448
LK NIL + ++DFG+ S + T T + T +MAPE +
Sbjct: 161 LKAGNILFTLDGDIKLADFGV---------SAKNTRTIQRRDSFIGTPYWMAPEVVMCET 211
Query: 449 --EGIVSAKCDVYSYGVLLMETFTRKRPTDEM 478
+ K DV+S G+ L+E + P E+
Sbjct: 212 SKDRPYDYKADVWSLGITLIEMAEIEPPHHEL 243
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 105/233 (45%), Gaps = 17/233 (7%)
Query: 240 CRNRNTKKSDHEDFLPLAIWRRTSYLDIQ----RATDEFNECNLLGTSSFGSVYKGT-IS 294
R + T S++++++ IW++ ++ D ++ LGT +FG V++ T +
Sbjct: 16 VRGKGTVSSNYDNYV-FDIWKQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERA 74
Query: 295 DGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGS 354
G + A K E + E + + +RH L+ + ++ + + ++ EFM G
Sbjct: 75 TGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGE 134
Query: 355 L-EKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAH 413
L EK HN + E + M V L ++H + +H DLKP NI+
Sbjct: 135 LFEKVADEHNKMSED-EAVEYMRQVCKGLCHMHEN----NYVHLDLKPENIMFTTKRSNE 189
Query: 414 VS--DFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVL 464
+ DFG+ L + + SV+ +T T + APE V D++S GVL
Sbjct: 190 LKLIDFGLTAHL-DPKQSVK--VTTGTAEFAAPEVAEGKPVGYYTDMWSVGVL 239
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 101/206 (49%), Gaps = 24/206 (11%)
Query: 274 FNECNLLGTSSFGSVYKGTISD-GTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIK 332
+ + ++G SFG VY+ + D G VAIK + ++ F+ + E +++R + H N+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIVR 77
Query: 333 I----LSSYSNPD--FKALVLEFMPNG--SLEKWLYSHNYFLDILERLNIMIDVGSALEY 384
+ SS D + LVL+++P + + L ++ M + +L Y
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 385 LHNGHSSVHIIHCDLKPTNILLD-ENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
+H S I H D+KP N+LLD + V + DFG K L GE +V + + Y A
Sbjct: 138 IH----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRA 190
Query: 444 PE--YGLEGIVSAKCDVYSYGVLLME 467
PE +G S+ DV+S G +L E
Sbjct: 191 PELIFGATDYTSS-IDVWSAGCVLAE 215
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 96/215 (44%), Gaps = 18/215 (8%)
Query: 265 LDIQRATDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLE------RAFRSFDSE 318
L Q +++ + +G ++G VYK S G VA+K L E A R E
Sbjct: 14 LYFQGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIR----E 69
Query: 319 CEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDV 378
+L+ + H N++ ++ + LV EFM L+K L + L + I I +
Sbjct: 70 ISLLKELHHPNIVSLIDVIHSERCLTLVFEFM-EKDLKKVLDENKTGL---QDSQIKIYL 125
Query: 379 GSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMAT 438
L + + H I+H DLKP N+L++ + ++DFG+ + G S T + T
Sbjct: 126 YQLLRGVAHCHQH-RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVVT 182
Query: 439 IGYMAPEYGL-EGIVSAKCDVYSYGVLLMETFTRK 472
+ Y AP+ + S D++S G + E T K
Sbjct: 183 LWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 95/209 (45%), Gaps = 18/209 (8%)
Query: 265 LDIQRATDEFNECNLLGTSSFGSVY--KGTISDGTDVAIKVF---NLQLERAFRSFDSEC 319
L Q +D + LG+ ++G V K ++ G + AIK+ ++ + E
Sbjct: 14 LYFQGLSDRYQRVKKLGSGAYGEVLLCKDKLT-GAERAIKIIKKSSVTTTSNSGALLDEV 72
Query: 320 EVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVG 379
VL+ + H N++K+ + + LV+E G L + F ++ + IM V
Sbjct: 73 AVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEV-DAAVIMKQVL 131
Query: 380 SALEYLHNGHSSVHIIHCDLKPTNILLD---ENMVAHVSDFGIYKLLGEGEDSVRQTMTM 436
S YLH + I+H DLKP N+LL+ + + + DFG L E + +
Sbjct: 132 SGTTYLHKHN----IVHRDLKPENLLLESKSRDALIKIVDFG---LSAHFEVGGKMKERL 184
Query: 437 ATIGYMAPEYGLEGIVSAKCDVYSYGVLL 465
T Y+APE L KCDV+S GV+L
Sbjct: 185 GTAYYIAPEV-LRKKYDEKCDVWSCGVIL 212
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 96/215 (44%), Gaps = 18/215 (8%)
Query: 265 LDIQRATDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLE------RAFRSFDSE 318
L Q +++ + +G ++G VYK S G VA+K L E A R E
Sbjct: 14 LYFQGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIR----E 69
Query: 319 CEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDV 378
+L+ + H N++ ++ + LV EFM L+K L + L + I I +
Sbjct: 70 ISLLKELHHPNIVSLIDVIHSERCLTLVFEFM-EKDLKKVLDENKTGL---QDSQIKIYL 125
Query: 379 GSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMAT 438
L + + H I+H DLKP N+L++ + ++DFG+ + G S T + T
Sbjct: 126 YQLLRGVAHCHQH-RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVVT 182
Query: 439 IGYMAPEYGL-EGIVSAKCDVYSYGVLLMETFTRK 472
+ Y AP+ + S D++S G + E T K
Sbjct: 183 LWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 12/205 (5%)
Query: 280 LGTSSFGSVYKGTISDGTDVAI-KVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYS 338
LG +FG VYK + + +A KV + + E + E ++L + H N++K+L ++
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 339 NPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCD 398
+ +++EF G+++ + L + + AL YLH+ IIH D
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN----KIIHRD 160
Query: 399 LKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGL-----EGIVS 453
LK NIL + ++DFG+ R+ + T +MAPE + +
Sbjct: 161 LKAGNILFTLDGDIKLADFGVSA--KNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYD 218
Query: 454 AKCDVYSYGVLLMETFTRKRPTDEM 478
K DV+S G+ L+E + P E+
Sbjct: 219 YKADVWSLGITLIEMAEIEPPHHEL 243
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 272 DEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNL--QLERAFRSFDSECEVLRNVRHR 328
+ F + +G ++G VYK G VA+K L + E + E +L+ + H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 329 NLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID-VGSALEYLHN 387
N++K+L + LV EF+ + L+K F+D I + + S L L
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFL-HQDLKK-------FMDASALTGIPLPLIKSYLFQLLQ 121
Query: 388 GHSSVH---IIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQ-TMTMATIGYMA 443
G + H ++H DLKP N+L++ ++DFG+ + G VR T + T+ Y A
Sbjct: 122 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV---PVRTYTHEVVTLWYRA 178
Query: 444 PEYGL-EGIVSAKCDVYSYGVLLMETFTRK 472
PE L S D++S G + E TR+
Sbjct: 179 PEILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
Query: 365 FLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424
FL + + V +E+L +S IH DL NILL E V + DFG+ + +
Sbjct: 189 FLTLEHLICYSFQVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIY 244
Query: 425 EGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
+ D VR+ + +MAPE + + + + DV+S+GVLL E F+
Sbjct: 245 KDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
Query: 365 FLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424
FL + + V +E+L +S IH DL NILL E V + DFG+ + +
Sbjct: 187 FLTLEHLICYSFQVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIY 242
Query: 425 EGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
+ D VR+ + +MAPE + + + + DV+S+GVLL E F+
Sbjct: 243 KDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 272 DEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNL--QLERAFRSFDSECEVLRNVRHR 328
+ F + +G ++G VYK G VA+K L + E + E +L+ + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 329 NLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID-VGSALEYLHN 387
N++K+L + LV EF+ + L+K F+D I + + S L L
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKK-------FMDASALTGIPLPLIKSYLFQLLQ 114
Query: 388 GHSSVH---IIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQ-TMTMATIGYMA 443
G + H ++H DLKP N+L++ ++DFG+ + G VR T + T+ Y A
Sbjct: 115 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV---PVRTYTHEVVTLWYRA 171
Query: 444 PEYGL-EGIVSAKCDVYSYGVLLMETFTRK 472
PE L S D++S G + E TR+
Sbjct: 172 PEILLGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
Query: 365 FLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424
FL + + V +E+L +S IH DL NILL E V + DFG+ + +
Sbjct: 196 FLTLEHLICYSFQVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIY 251
Query: 425 EGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
+ D VR+ + +MAPE + + + + DV+S+GVLL E F+
Sbjct: 252 KDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
Query: 365 FLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424
FL + + V +E+L +S IH DL NILL E V + DFG+ + +
Sbjct: 194 FLTLEHLICYSFQVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIY 249
Query: 425 EGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
+ D VR+ + +MAPE + + + + DV+S+GVLL E F+
Sbjct: 250 KDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 94/201 (46%), Gaps = 14/201 (6%)
Query: 273 EFNECNLLGTSSFGSVYKGT-ISDGTDVAIKVFNLQL---ERAFRSFDSECEVL-RNVRH 327
+F+ ++G SFG V ++ A+KV + ++ + SE VL +NV+H
Sbjct: 39 DFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKH 98
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
L+ + S+ D VL+++ G L L FL+ R ++ SAL YLH
Sbjct: 99 PFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARF-YAAEIASALGYLH- 156
Query: 388 GHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTM-ATIGYMAPEY 446
S++I++ DLKP NILLD ++DFG+ K E + T T T Y+APE
Sbjct: 157 ---SLNIVYRDLKPENILLDSQGHIVLTDFGLCK---ENIEHNSTTSTFCGTPEYLAPEV 210
Query: 447 GLEGIVSAKCDVYSYGVLLME 467
+ D + G +L E
Sbjct: 211 LHKQPYDRTVDWWCLGAVLYE 231
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 90/199 (45%), Gaps = 10/199 (5%)
Query: 271 TDEFNECNLLGTSSFGSVYKGT-ISDGTDVAIKVFNLQL--ERAFRSFDSECEVLRNVRH 327
+D ++ LG +F V + + G + A K+ N + R F+ + E + R ++H
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 87
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLH- 386
N++++ S F LV + + G L + + + ++ + + + + + ++ Y H
Sbjct: 88 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEA-DASHCIQQILESIAYCHS 146
Query: 387 NGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEY 446
NG I+H +LKP N+LL + L E DS T GY++PE
Sbjct: 147 NG-----IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEV 201
Query: 447 GLEGIVSAKCDVYSYGVLL 465
+ S D+++ GV+L
Sbjct: 202 LKKDPYSKPVDIWACGVIL 220
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 96/215 (44%), Gaps = 12/215 (5%)
Query: 265 LDIQRATDEFNECNLLGTSSFGSV-YKGTISDGTDVAIKVFNLQLERAFRSFD---SECE 320
+D + +EF LLG +FG V + G A+K+ ++ A +E
Sbjct: 3 MDPRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENR 62
Query: 321 VLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGS 380
VL+N RH L + S+ D V+E+ G L L F + R ++ S
Sbjct: 63 VLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVS 121
Query: 381 ALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEG-EDSVRQTMTMATI 439
AL+YLH S ++++ DLK N++LD++ ++DFG+ K EG +D T
Sbjct: 122 ALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKXFCGTP 175
Query: 440 GYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRP 474
Y+APE + D + GV++ E + P
Sbjct: 176 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 210
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 99/217 (45%), Gaps = 27/217 (12%)
Query: 277 CNLLGTSSFGSVYKGTISDGTDV-AIKVFN-LQLERAFRSFDSECEVLRNVRHRNLIKIL 334
++LG + +V++G D+ AIKVFN + R E EVL+ + H+N++K+
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 335 S--SYSNPDFKALVLEFMPNGSLEKWLY--SHNYFLDILERLNIMIDVGSALEYL-HNGH 389
+ + K L++EF P GSL L S+ Y L E L ++ DV + +L NG
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG- 132
Query: 390 SSVHIIHCDLKPTNILL----DENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPE 445
I+H ++KP NI+ D V ++DFG + L ED + T Y+ P+
Sbjct: 133 ----IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL---EDDEQFVSLYGTEEYLHPD 185
Query: 446 YGLEGIV--------SAKCDVYSYGVLLMETFTRKRP 474
++ A D++S GV T P
Sbjct: 186 MYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 105/216 (48%), Gaps = 36/216 (16%)
Query: 272 DEFNECNLLGTSSFGSVYKGTISDGT--DVAIKVFNLQLERAFR-----------SFDSE 318
DE+ LG+ + G V K T VAIK+ + +R F + ++E
Sbjct: 10 DEYIMSKTLGSGACGEV-KLAFERKTCKKVAIKIIS---KRKFAIGSAREADPALNVETE 65
Query: 319 CEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDV 378
E+L+ + H +IKI + + D+ +VLE M G L + + + +L +
Sbjct: 66 IEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL-YFYQM 123
Query: 379 GSALEYLH-NGHSSVHIIHCDLKPTNILL---DENMVAHVSDFGIYKLLGEGEDSVRQTM 434
A++YLH NG IIH DLKP N+LL +E+ + ++DFG K+L GE S+ +T+
Sbjct: 124 LLAVQYLHENG-----IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTL 176
Query: 435 TMATIGYMAPE----YGLEGIVSAKCDVYSYGVLLM 466
T Y+APE G G A D +S GV+L
Sbjct: 177 C-GTPTYLAPEVLVSVGTAGYNRA-VDCWSLGVILF 210
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 96/221 (43%), Gaps = 18/221 (8%)
Query: 251 EDFLPLAIWRRTSYLDIQRATDEFNECNLLGTSSFGSVYKGTISD-GTDVAIKVFNLQLE 309
EDFL W S Q D+F+ LGT SFG V + G A+K+ + Q
Sbjct: 24 EDFL--KKWETPSQNTAQ--LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV 79
Query: 310 RAFRSFD---SECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFL 366
+ + +E +L+ V L+K+ S+ + +V+E++ G + L F
Sbjct: 80 VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS 139
Query: 367 DILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEG 426
+ R + EYLH S+ +I+ DLKP N+L+D+ V+DFG K +
Sbjct: 140 EPHARF-YAAQIVLTFEYLH----SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--- 191
Query: 427 EDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLME 467
R T +APE L + D ++ GVL+ E
Sbjct: 192 --KGRTWXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 105/216 (48%), Gaps = 36/216 (16%)
Query: 272 DEFNECNLLGTSSFGSVYKGTISDGT--DVAIKVFNLQLERAFR-----------SFDSE 318
DE+ LG+ + G V K T VAIK+ + +R F + ++E
Sbjct: 10 DEYIMSKTLGSGACGEV-KLAFERKTCKKVAIKIIS---KRKFAIGSAREADPALNVETE 65
Query: 319 CEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDV 378
E+L+ + H +IKI + + D+ +VLE M G L + + + +L +
Sbjct: 66 IEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL-YFYQM 123
Query: 379 GSALEYLH-NGHSSVHIIHCDLKPTNILL---DENMVAHVSDFGIYKLLGEGEDSVRQTM 434
A++YLH NG IIH DLKP N+LL +E+ + ++DFG K+L GE S+ +T+
Sbjct: 124 LLAVQYLHENG-----IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTL 176
Query: 435 TMATIGYMAPE----YGLEGIVSAKCDVYSYGVLLM 466
T Y+APE G G A D +S GV+L
Sbjct: 177 C-GTPTYLAPEVLVSVGTAGYNRA-VDCWSLGVILF 210
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 103/207 (49%), Gaps = 14/207 (6%)
Query: 272 DEFNECNLLGTSSFGSVYK-GTISDGTDVAIKVFNLQLERAFRS-FDSECEVLRNVRHRN 329
D+F + LG + G V K G +A K+ +L+++ A R+ E +VL
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 75
Query: 330 LIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLD-ILERLNIMIDVGSALEYLHNG 388
++ ++ + ++ +E M GSL++ L + IL +++I + G L YL
Sbjct: 76 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRG--LAYLREK 133
Query: 389 HSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGL 448
H I+H D+KP+NIL++ + DFG+ G+ DS+ + + T YMAPE L
Sbjct: 134 H---QIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSF-VGTRSYMAPER-L 185
Query: 449 EGI-VSAKCDVYSYGVLLMETFTRKRP 474
+G S + D++S G+ L+E + P
Sbjct: 186 QGTHYSVQSDIWSMGLSLVELAVGRYP 212
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 272 DEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNL--QLERAFRSFDSECEVLRNVRHR 328
+ F + +G ++G VYK G VA+K L + E + E +L+ + H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 329 NLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID-VGSALEYLHN 387
N++K+L + LV EF+ + L+K F+D I + + S L L
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFL-HQDLKK-------FMDASALTGIPLPLIKSYLFQLLQ 121
Query: 388 GHSSVH---IIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQ-TMTMATIGYMA 443
G + H ++H DLKP N+L++ ++DFG+ + G VR T + T+ Y A
Sbjct: 122 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV---PVRTYTHEVVTLWYRA 178
Query: 444 PEYGLE-GIVSAKCDVYSYGVLLMETFTRK 472
PE L S D++S G + E TR+
Sbjct: 179 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 105/216 (48%), Gaps = 36/216 (16%)
Query: 272 DEFNECNLLGTSSFGSVYKGTISDGT--DVAIKVFNLQLERAFR-----------SFDSE 318
DE+ LG+ + G V K T VAIK+ + +R F + ++E
Sbjct: 16 DEYIMSKTLGSGACGEV-KLAFERKTCKKVAIKIIS---KRKFAIGSAREADPALNVETE 71
Query: 319 CEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDV 378
E+L+ + H +IKI + + D+ +VLE M G L + + + +L +
Sbjct: 72 IEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL-YFYQM 129
Query: 379 GSALEYLH-NGHSSVHIIHCDLKPTNILL---DENMVAHVSDFGIYKLLGEGEDSVRQTM 434
A++YLH NG IIH DLKP N+LL +E+ + ++DFG K+L GE S+ +T+
Sbjct: 130 LLAVQYLHENG-----IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTL 182
Query: 435 TMATIGYMAPE----YGLEGIVSAKCDVYSYGVLLM 466
T Y+APE G G A D +S GV+L
Sbjct: 183 C-GTPTYLAPEVLVSVGTAGYNRA-VDCWSLGVILF 216
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 272 DEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNL--QLERAFRSFDSECEVLRNVRHR 328
+ F + +G ++G VYK G VA+K L + E + E +L+ + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 329 NLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID-VGSALEYLHN 387
N++K+L + LV EF+ + L+K F+D I + + S L L
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKK-------FMDASALTGIPLPLIKSYLFQLLQ 113
Query: 388 GHSSVH---IIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQ-TMTMATIGYMA 443
G + H ++H DLKP N+L++ ++DFG+ + G VR T + T+ Y A
Sbjct: 114 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV---PVRTYTHEVVTLWYRA 170
Query: 444 PEYGLE-GIVSAKCDVYSYGVLLMETFTRK 472
PE L S D++S G + E TR+
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 105/216 (48%), Gaps = 36/216 (16%)
Query: 272 DEFNECNLLGTSSFGSVYKGTISDGT--DVAIKVFNLQLERAFR-----------SFDSE 318
DE+ LG+ + G V K T VAIK+ + +R F + ++E
Sbjct: 10 DEYIMSKTLGSGACGEV-KLAFERKTCKKVAIKIIS---KRKFAIGSAREADPALNVETE 65
Query: 319 CEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDV 378
E+L+ + H +IKI + + D+ +VLE M G L + + + +L +
Sbjct: 66 IEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL-YFYQM 123
Query: 379 GSALEYLH-NGHSSVHIIHCDLKPTNILL---DENMVAHVSDFGIYKLLGEGEDSVRQTM 434
A++YLH NG IIH DLKP N+LL +E+ + ++DFG K+L GE S+ +T+
Sbjct: 124 LLAVQYLHENG-----IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTL 176
Query: 435 TMATIGYMAPE----YGLEGIVSAKCDVYSYGVLLM 466
T Y+APE G G A D +S GV+L
Sbjct: 177 C-GTPTYLAPEVLVSVGTAGYNRA-VDCWSLGVILF 210
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 91/179 (50%), Gaps = 8/179 (4%)
Query: 296 GTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSL 355
G VA+K+ +L+ ++ +E ++R+ +H N++++ SY + +++EF+ G+L
Sbjct: 70 GRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGAL 129
Query: 356 EKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVS 415
+ L+ + + V AL YLH + +IH D+K +ILL + +S
Sbjct: 130 TDIV--SQVRLNEEQIATVCEAVLQALAYLH----AQGVIHRDIKSDSILLTLDGRVKLS 183
Query: 416 DFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRP 474
DFG + +D ++ + T +MAPE + + + D++S G++++E + P
Sbjct: 184 DFGFCAQI--SKDVPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPP 240
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 105/216 (48%), Gaps = 36/216 (16%)
Query: 272 DEFNECNLLGTSSFGSVYKGTISDGT--DVAIKVFNLQLERAFR-----------SFDSE 318
DE+ LG+ + G V K T VAIK+ + +R F + ++E
Sbjct: 9 DEYIMSKTLGSGACGEV-KLAFERKTCKKVAIKIIS---KRKFAIGSAREADPALNVETE 64
Query: 319 CEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDV 378
E+L+ + H +IKI + + D+ +VLE M G L + + + +L +
Sbjct: 65 IEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL-YFYQM 122
Query: 379 GSALEYLH-NGHSSVHIIHCDLKPTNILL---DENMVAHVSDFGIYKLLGEGEDSVRQTM 434
A++YLH NG IIH DLKP N+LL +E+ + ++DFG K+L GE S+ +T+
Sbjct: 123 LLAVQYLHENG-----IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTL 175
Query: 435 TMATIGYMAPE----YGLEGIVSAKCDVYSYGVLLM 466
T Y+APE G G A D +S GV+L
Sbjct: 176 C-GTPTYLAPEVLVSVGTAGYNRA-VDCWSLGVILF 209
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 99/233 (42%), Gaps = 20/233 (8%)
Query: 262 TSYLDIQRATDEFNECNLLGTSSFGSVYKGT-ISDGTDVAIKVFN------LQLERAFRS 314
TS D Q + +G +F V + G +VA+K+ + L++ FR
Sbjct: 5 TSATDEQPHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFR- 63
Query: 315 FDSECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 374
E +++ + H N++K+ LV+E+ G + +L +H + R
Sbjct: 64 ---EVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF 120
Query: 375 MIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTM 434
+ SA++Y H + I+H DLK N+LLD +M ++DFG G +
Sbjct: 121 R-QIVSAVQYCHQKY----IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGN---KLDT 172
Query: 435 TMATIGYMAPE-YGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLR 486
+ Y APE + + + DV+S GV+L + P D + E+ R
Sbjct: 173 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRER 225
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 84/173 (48%), Gaps = 16/173 (9%)
Query: 298 DVAIKVFNLQLERAFRSFDSECEVL-RNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLE 356
+ A+KV ++++ R E E+L R +H N+I + Y + LV E M G L
Sbjct: 54 EYAVKV----IDKSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELL 109
Query: 357 KWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNIL-LDEN---MVA 412
+ +F + E ++ +G +EYLH S ++H DLKP+NIL +DE+
Sbjct: 110 DKILRQKFFSE-REASFVLHTIGKTVEYLH----SQGVVHRDLKPSNILYVDESGNPECL 164
Query: 413 HVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLL 465
+ DFG K L E+ + T T ++APE CD++S G+LL
Sbjct: 165 RICDFGFAKQL-RAENGLLMT-PCYTANFVAPEVLKRQGYDEGCDIWSLGILL 215
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 272 DEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNL--QLERAFRSFDSECEVLRNVRHR 328
+ F + +G ++G VYK G VA+K L + E + E +L+ + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 329 NLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID-VGSALEYLHN 387
N++K+L + LV EF+ + L+K F+D I + + S L L
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKK-------FMDASALTGIPLPLIKSYLFQLLQ 114
Query: 388 GHSSVH---IIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQ-TMTMATIGYMA 443
G + H ++H DLKP N+L++ ++DFG+ + G VR T + T+ Y A
Sbjct: 115 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV---PVRTYTHEVVTLWYRA 171
Query: 444 PEYGLE-GIVSAKCDVYSYGVLLMETFTRK 472
PE L S D++S G + E TR+
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 272 DEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNL--QLERAFRSFDSECEVLRNVRHR 328
+ F + +G ++G VYK G VA+K L + E + E +L+ + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 329 NLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID-VGSALEYLHN 387
N++K+L + LV EF+ + L+K F+D I + + S L L
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKK-------FMDASALTGIPLPLIKSYLFQLLQ 113
Query: 388 GHSSVH---IIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQ-TMTMATIGYMA 443
G + H ++H DLKP N+L++ ++DFG+ + G VR T + T+ Y A
Sbjct: 114 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV---PVRTYTHEVVTLWYRA 170
Query: 444 PEYGLE-GIVSAKCDVYSYGVLLMETFTRK 472
PE L S D++S G + E TR+
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 20/212 (9%)
Query: 270 ATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNL--QLERAFRSFDSECEVLRNVR 326
+ + F + +G ++G VYK G VA+K L + E + E +L+ +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 327 HRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID-VGSALEYL 385
H N++K+L + LV EF+ + L+K F+D I + + S L L
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKK-------FMDASALTGIPLPLIKSYLFQL 113
Query: 386 HNGHSSVH---IIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQ-TMTMATIGY 441
G + H ++H DLKP N+L++ ++DFG+ + G VR T + T+ Y
Sbjct: 114 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV---PVRTYTHEVVTLWY 170
Query: 442 MAPEYGLE-GIVSAKCDVYSYGVLLMETFTRK 472
APE L S D++S G + E TR+
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 272 DEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNL--QLERAFRSFDSECEVLRNVRHR 328
+ F + +G ++G VYK G VA+K L + E + E +L+ + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 329 NLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID-VGSALEYLHN 387
N++K+L + LV EF+ + L+K F+D I + + S L L
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKK-------FMDASALTGIPLPLIKSYLFQLLQ 114
Query: 388 GHSSVH---IIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQ-TMTMATIGYMA 443
G + H ++H DLKP N+L++ ++DFG+ + G VR T + T+ Y A
Sbjct: 115 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV---PVRTYTHEVVTLWYRA 171
Query: 444 PEYGLE-GIVSAKCDVYSYGVLLMETFTRK 472
PE L S D++S G + E TR+
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 272 DEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNL--QLERAFRSFDSECEVLRNVRHR 328
+ F + +G ++G VYK G VA+K L + E + E +L+ + H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 329 NLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID-VGSALEYLHN 387
N++K+L + LV EF+ + L+K F+D I + + S L L
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFL-HQDLKK-------FMDASALTGIPLPLIKSYLFQLLQ 118
Query: 388 GHSSVH---IIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQ-TMTMATIGYMA 443
G + H ++H DLKP N+L++ ++DFG+ + G VR T + T+ Y A
Sbjct: 119 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV---PVRTYTHEVVTLWYRA 175
Query: 444 PEYGLE-GIVSAKCDVYSYGVLLMETFTRK 472
PE L S D++S G + E TR+
Sbjct: 176 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 103/222 (46%), Gaps = 27/222 (12%)
Query: 267 IQRATDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAF----RS----FDSE 318
+Q ++++ ++G +FG V + KV+ ++L F RS F E
Sbjct: 70 LQMKAEDYDVVKVIGRGAFGEVQLVR----HKASQKVYAMKLLSKFEMIKRSDSAFFWEE 125
Query: 319 CEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLN--IMI 376
+++ ++++ ++ + + +V+E+MP G L + NY D+ E+
Sbjct: 126 RDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLM--SNY--DVPEKWAKFYTA 181
Query: 377 DVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTM 436
+V AL+ +H S+ +IH D+KP N+LLD++ ++DFG + E V +
Sbjct: 182 EVVLALDAIH----SMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDE-TGMVHCDTAV 236
Query: 437 ATIGYMAPE----YGLEGIVSAKCDVYSYGVLLMETFTRKRP 474
T Y++PE G +G +CD +S GV L E P
Sbjct: 237 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTP 278
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 95/202 (47%), Gaps = 16/202 (7%)
Query: 271 TDEFNECNLLGTSSFGSVYKGT-ISDGTDVAIKVFNLQL--ERAFRSFDSECEVLRNVRH 327
+D ++ LG +F V + + G + A K+ N + R F+ + E + R ++H
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLH- 386
N++++ S F LV + + G L + + + ++ + + + + + ++ Y H
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEA-DASHCIQQILESIAYCHS 122
Query: 387 NGHSSVHIIHCDLKPTNILL---DENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
NG I+H +LKP N+LL + ++DFG L E DS T GY++
Sbjct: 123 NG-----IVHRNLKPENLLLASKAKGAAVKLADFG---LAIEVNDSEAWHGFAGTPGYLS 174
Query: 444 PEYGLEGIVSAKCDVYSYGVLL 465
PE + S D+++ GV+L
Sbjct: 175 PEVLKKDPYSKPVDIWACGVIL 196
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 90/199 (45%), Gaps = 10/199 (5%)
Query: 271 TDEFNECNLLGTSSFGSVYKGT-ISDGTDVAIKVFNLQL--ERAFRSFDSECEVLRNVRH 327
+D ++ LG +F V + + G + A K+ N + R F+ + E + R ++H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLH- 386
N++++ S F LV + + G L + + + ++ + + + + + ++ Y H
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEA-DASHCIQQILESIAYCHS 123
Query: 387 NGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEY 446
NG I+H +LKP N+LL + L E DS T GY++PE
Sbjct: 124 NG-----IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEV 178
Query: 447 GLEGIVSAKCDVYSYGVLL 465
+ S D+++ GV+L
Sbjct: 179 LKKDPYSKPVDIWACGVIL 197
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 94/215 (43%), Gaps = 20/215 (9%)
Query: 280 LGTSSFGSVYKGT-ISDGTDVAIKVFNL------QLERAFRSFDSECEVLRNVRHRNLIK 332
+G +F V I G +VA+K+ + L++ FR E +++ + H N++K
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR----EVRIMKVLNHPNIVK 70
Query: 333 ILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSV 392
+ LV+E+ G + +L +H + + R + SA++Y H
Sbjct: 71 LFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFR-QIVSAVQYCHQKF--- 126
Query: 393 HIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPE-YGLEGI 451
I+H DLK N+LLD +M ++DFG G + + Y APE + +
Sbjct: 127 -IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN---KLDTFCGSPPYAAPELFQGKKY 182
Query: 452 VSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLR 486
+ DV+S GV+L + P D + E+ R
Sbjct: 183 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRER 217
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 95/202 (47%), Gaps = 16/202 (7%)
Query: 271 TDEFNECNLLGTSSFGSVYKGT-ISDGTDVAIKVFNLQL--ERAFRSFDSECEVLRNVRH 327
+D ++ LG +F V + + G + A K+ N + R F+ + E + R ++H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLH- 386
N++++ S F LV + + G L + + + ++ + + + + + ++ Y H
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEA-DASHCIQQILESIAYCHS 123
Query: 387 NGHSSVHIIHCDLKPTNILL---DENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
NG I+H +LKP N+LL + ++DFG L E DS T GY++
Sbjct: 124 NG-----IVHRNLKPENLLLASKAKGAAVKLADFG---LAIEVNDSEAWHGFAGTPGYLS 175
Query: 444 PEYGLEGIVSAKCDVYSYGVLL 465
PE + S D+++ GV+L
Sbjct: 176 PEVLKKDPYSKPVDIWACGVIL 197
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 18/211 (8%)
Query: 272 DEFNECNLLGTSSFGSV-YKGTISDGTDVAIKVFNLQLERAFRSFD---SECEVLRNVRH 327
+EF LLG +FG V + G A+K+ ++ A +E VL+N RH
Sbjct: 148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 207
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
L + S+ D V+E+ G L L F + R ++ SAL+YLH
Sbjct: 208 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALDYLH- 265
Query: 388 GHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATI----GYMA 443
S ++++ DLK N++LD++ ++DFG+ K + ++ TM T Y+A
Sbjct: 266 --SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK------EGIKDGATMKTFCGTPEYLA 317
Query: 444 PEYGLEGIVSAKCDVYSYGVLLMETFTRKRP 474
PE + D + GV++ E + P
Sbjct: 318 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 348
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 84/173 (48%), Gaps = 16/173 (9%)
Query: 298 DVAIKVFNLQLERAFRSFDSECEVL-RNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLE 356
+ A+KV ++++ R E E+L R +H N+I + Y + LV E M G L
Sbjct: 54 EYAVKV----IDKSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELL 109
Query: 357 KWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNIL-LDEN---MVA 412
+ +F + E ++ +G +EYLH S ++H DLKP+NIL +DE+
Sbjct: 110 DKILRQKFFSE-REASFVLHTIGKTVEYLH----SQGVVHRDLKPSNILYVDESGNPECL 164
Query: 413 HVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLL 465
+ DFG K L E+ + T T ++APE CD++S G+LL
Sbjct: 165 RICDFGFAKQL-RAENGLLMT-PCYTANFVAPEVLKRQGYDEGCDIWSLGILL 215
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 18/211 (8%)
Query: 272 DEFNECNLLGTSSFGSV-YKGTISDGTDVAIKVFNLQLERAFRSFD---SECEVLRNVRH 327
+EF LLG +FG V + G A+K+ ++ A +E VL+N RH
Sbjct: 151 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 210
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
L + S+ D V+E+ G L L F + R ++ SAL+YLH
Sbjct: 211 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALDYLH- 268
Query: 388 GHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATI----GYMA 443
S ++++ DLK N++LD++ ++DFG+ K + ++ TM T Y+A
Sbjct: 269 --SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK------EGIKDGATMKTFCGTPEYLA 320
Query: 444 PEYGLEGIVSAKCDVYSYGVLLMETFTRKRP 474
PE + D + GV++ E + P
Sbjct: 321 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 351
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 100/220 (45%), Gaps = 22/220 (10%)
Query: 273 EFNECNL-----LGTSSFGSVYKGT-ISDGTDVAIKVFNLQLERAFRSFD------SECE 320
EF NL LG +FG V + T G + A+ +++ ++ D SE +
Sbjct: 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 101
Query: 321 VLRNV-RHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVG 379
++ ++ +H N++ +L + ++ ++ E+ G L +L + L+ I
Sbjct: 102 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTA 161
Query: 380 SALEYLHNGH---------SSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSV 430
S + LH +S + IH D+ N+LL VA + DFG+ + + + +
Sbjct: 162 STRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 221
Query: 431 RQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
+ + +MAPE + + + + DV+SYG+LL E F+
Sbjct: 222 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 84/159 (52%), Gaps = 19/159 (11%)
Query: 316 DSECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIM 375
++E E+L+ + H +IKI + + D+ +VLE M G L + + + +L
Sbjct: 202 ETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL-YF 259
Query: 376 IDVGSALEYLH-NGHSSVHIIHCDLKPTNILL---DENMVAHVSDFGIYKLLGEGEDSVR 431
+ A++YLH NG IIH DLKP N+LL +E+ + ++DFG K+LGE S+
Sbjct: 260 YQMLLAVQYLHENG-----IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET--SLM 312
Query: 432 QTMTMATIGYMAPE----YGLEGIVSAKCDVYSYGVLLM 466
+T+ T Y+APE G G A D +S GV+L
Sbjct: 313 RTLC-GTPTYLAPEVLVSVGTAGYNRA-VDCWSLGVILF 349
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 84/159 (52%), Gaps = 19/159 (11%)
Query: 316 DSECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIM 375
++E E+L+ + H +IKI + + D+ +VLE M G L + + + +L
Sbjct: 188 ETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL-YF 245
Query: 376 IDVGSALEYLH-NGHSSVHIIHCDLKPTNILL---DENMVAHVSDFGIYKLLGEGEDSVR 431
+ A++YLH NG IIH DLKP N+LL +E+ + ++DFG K+LGE S+
Sbjct: 246 YQMLLAVQYLHENG-----IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET--SLM 298
Query: 432 QTMTMATIGYMAPE----YGLEGIVSAKCDVYSYGVLLM 466
+T+ T Y+APE G G A D +S GV+L
Sbjct: 299 RTLC-GTPTYLAPEVLVSVGTAGYNRA-VDCWSLGVILF 335
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 93/214 (43%), Gaps = 19/214 (8%)
Query: 262 TSYLDIQRATDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVF-----NLQLERAFRSFD 316
T +IQR E C +G FG V++G + A+ V N + F
Sbjct: 382 TRDYEIQRERIELGRC--IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFL 439
Query: 317 SECEVLRNVRHRNLIKILSSYS-NPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIM 375
E +R H +++K++ + NP + +++E G L +L + LD+ +
Sbjct: 440 QEALTMRQFDHPHIVKLIGVITENPVW--IIMELCTLGELRSFLQVRKFSLDLASLILYA 497
Query: 376 IDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSV--RQT 433
+ +AL YL S +H D+ N+L+ N + DFG+ + + EDS + +
Sbjct: 498 YQLSTALAYLE----SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM---EDSTYYKAS 550
Query: 434 MTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLME 467
I +MAPE ++ DV+ +GV + E
Sbjct: 551 KGKLPIKWMAPESINFRRFTSASDVWMFGVCMWE 584
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 86/189 (45%), Gaps = 17/189 (8%)
Query: 317 SECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIM- 375
+E ++L V R ++ + +Y D LVL M G L+ +Y H E +
Sbjct: 233 NEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIY-HMGQAGFPEARAVFY 291
Query: 376 -IDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTM 434
++ LE LH I++ DLKP NILLD++ +SD G+ + EG QT+
Sbjct: 292 AAEICCGLEDLHR----ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG-----QTI 342
Query: 435 T--MATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDE--MFIGEMSLRRWVK 490
+ T+GYMAPE + D ++ G LL E + P + I + R VK
Sbjct: 343 KGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVK 402
Query: 491 ESLPHGLTE 499
E +P +E
Sbjct: 403 E-VPEEYSE 410
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 93/208 (44%), Gaps = 12/208 (5%)
Query: 272 DEFNECNLLGTSSFGSV-YKGTISDGTDVAIKVFNLQLERAFRSFD---SECEVLRNVRH 327
+EF LLG +FG V + G A+K+ ++ A +E VL+N RH
Sbjct: 9 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 68
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
L + S+ D V+E+ G L L F + R ++ SAL+YLH
Sbjct: 69 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALDYLH- 126
Query: 388 GHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEG-EDSVRQTMTMATIGYMAPEY 446
S ++++ DLK N++LD++ ++DFG+ K EG +D T Y+APE
Sbjct: 127 --SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKXFCGTPEYLAPEV 181
Query: 447 GLEGIVSAKCDVYSYGVLLMETFTRKRP 474
+ D + GV++ E + P
Sbjct: 182 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 93/227 (40%), Gaps = 34/227 (14%)
Query: 269 RATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLERAFRSFDSECEVLRNVRH 327
R +F E +LG +FG V K + D AIK E + SE +L ++ H
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVXLLASLNH 61
Query: 328 -------------RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 374
RN +K ++ + E+ N +L ++S N E +
Sbjct: 62 QYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRL 121
Query: 375 MIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVR--- 431
+ AL Y+H S IIH +LKP NI +DE+ + DFG+ K + D ++
Sbjct: 122 FRQILEALSYIH----SQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS 177
Query: 432 ---------QTMTMATIGYMAPEYGLEGI--VSAKCDVYSYGVLLME 467
T + T Y+A E L+G + K D YS G++ E
Sbjct: 178 QNLPGSSDNLTSAIGTAXYVATEV-LDGTGHYNEKIDXYSLGIIFFE 223
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 95/187 (50%), Gaps = 27/187 (14%)
Query: 297 TDVAIKVFNLQ----LERAFRSFDSECEVLRNVR-HRNLIKILSSYSNPDFKALVLEFMP 351
+ A+K+ Q R FR E E+L + HRN+++++ + D LV E M
Sbjct: 39 QEYAVKIIEKQPGHIRSRVFR----EVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMR 94
Query: 352 NGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDE-NM 410
GS+ ++ +F + LE ++ DV SAL++LHN I H DLKP NIL + N
Sbjct: 95 GGSILSHIHKRRHFNE-LEASVVVQDVASALDFLHNK----GIAHRDLKPENILCEHPNQ 149
Query: 411 VAHVS--DFGI---YKLLGEGED-SVRQTMT-MATIGYMAPE----YGLEG-IVSAKCDV 458
V+ V DFG+ KL G+ S + +T + YMAPE + E I +CD+
Sbjct: 150 VSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDL 209
Query: 459 YSYGVLL 465
+S GV+L
Sbjct: 210 WSLGVIL 216
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 93/208 (44%), Gaps = 12/208 (5%)
Query: 272 DEFNECNLLGTSSFGSV-YKGTISDGTDVAIKVFNLQLERAFRSFD---SECEVLRNVRH 327
+EF LLG +FG V + G A+K+ ++ A +E VL+N RH
Sbjct: 8 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 67
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
L + S+ D V+E+ G L L F + R ++ SAL+YLH
Sbjct: 68 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALDYLH- 125
Query: 388 GHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEG-EDSVRQTMTMATIGYMAPEY 446
S ++++ DLK N++LD++ ++DFG+ K EG +D T Y+APE
Sbjct: 126 --SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKXFCGTPEYLAPEV 180
Query: 447 GLEGIVSAKCDVYSYGVLLMETFTRKRP 474
+ D + GV++ E + P
Sbjct: 181 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 208
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 86/189 (45%), Gaps = 17/189 (8%)
Query: 317 SECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIM- 375
+E ++L V R ++ + +Y D LVL M G L+ +Y H E +
Sbjct: 233 NEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIY-HMGQAGFPEARAVFY 291
Query: 376 -IDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTM 434
++ LE LH I++ DLKP NILLD++ +SD G+ + EG QT+
Sbjct: 292 AAEICCGLEDLHR----ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG-----QTI 342
Query: 435 T--MATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDE--MFIGEMSLRRWVK 490
+ T+GYMAPE + D ++ G LL E + P + I + R VK
Sbjct: 343 KGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVK 402
Query: 491 ESLPHGLTE 499
E +P +E
Sbjct: 403 E-VPEEYSE 410
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 95/202 (47%), Gaps = 15/202 (7%)
Query: 271 TDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQL--ERAFRSFDSECEVLRNVRH 327
TDE+ LG +F V + I G + A K+ N + R + + E + R ++H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLH- 386
N++++ S S F LV + + G L + + + Y+ + + + + + ++ + H
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEA-DASHCIQQILESVNHCHL 121
Query: 387 NGHSSVHIIHCDLKPTNILL---DENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
NG I+H DLKP N+LL + ++DFG+ + +G+ T GY++
Sbjct: 122 NG-----IVHRDLKPENLLLASKSKGAAVKLADFGL-AIEVQGDQQAWFGFA-GTPGYLS 174
Query: 444 PEYGLEGIVSAKCDVYSYGVLL 465
PE + D+++ GV+L
Sbjct: 175 PEVLRKDPYGKPVDMWACGVIL 196
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 95/202 (47%), Gaps = 15/202 (7%)
Query: 271 TDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQL--ERAFRSFDSECEVLRNVRH 327
TDE+ LG +F V + I G + A K+ N + R + + E + R ++H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLH- 386
N++++ S S F LV + + G L + + + Y+ + + + + + ++ + H
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEA-DASHCIQQILESVNHCHL 121
Query: 387 NGHSSVHIIHCDLKPTNILL---DENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
NG I+H DLKP N+LL + ++DFG+ + +G+ T GY++
Sbjct: 122 NG-----IVHRDLKPENLLLASKSKGAAVKLADFGL-AIEVQGDQQAWFGFA-GTPGYLS 174
Query: 444 PEYGLEGIVSAKCDVYSYGVLL 465
PE + D+++ GV+L
Sbjct: 175 PEVLRKDPYGKPVDMWACGVIL 196
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 93/203 (45%), Gaps = 18/203 (8%)
Query: 271 TDEFNECNLLGTSSFGSVY--KGTISDGTDVAIKVF---NLQLERAFRSFDSECEVLRNV 325
+D + LG+ ++G V K ++ G + AIK+ ++ + E VL+ +
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLT-GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 61
Query: 326 RHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYL 385
H N++K+ + + LV+E G L + F ++ + IM V S YL
Sbjct: 62 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEV-DAAVIMKQVLSGTTYL 120
Query: 386 HNGHSSVHIIHCDLKPTNILLD---ENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYM 442
H + I+H DLKP N+LL+ + + + DFG L E + + T Y+
Sbjct: 121 HKHN----IVHRDLKPENLLLESKSRDALIKIVDFG---LSAHFEVGGKMKERLGTAYYI 173
Query: 443 APEYGLEGIVSAKCDVYSYGVLL 465
APE L KCDV+S GV+L
Sbjct: 174 APEV-LRKKYDEKCDVWSCGVIL 195
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 106/220 (48%), Gaps = 27/220 (12%)
Query: 271 TDEFNECNLLGTSSFGSVYKGTISD-GTDVAIK---VFNLQLERAFRSFDSECEVLRNVR 326
+ +F +LLG ++G V T G VAIK F+ L A R+ E ++L++ +
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPL-FALRTL-REIKILKHFK 67
Query: 327 HRNLIKILS-----SYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSA 381
H N+I I + S+ N + ++ E M L + + + D ++ + A
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELM-QTDLHRVISTQMLSDDHIQYF--IYQTLRA 124
Query: 382 LEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGE-----GEDSVRQ---T 433
++ LH + +IH DLKP+N+L++ N V DFG+ +++ E E + +Q T
Sbjct: 125 VKVLHGSN----VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMT 180
Query: 434 MTMATIGYMAPEYGL-EGIVSAKCDVYSYGVLLMETFTRK 472
+AT Y APE L S DV+S G +L E F R+
Sbjct: 181 EXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 90/208 (43%), Gaps = 12/208 (5%)
Query: 269 RATDEFNECNLLGTSSFGSVYK-GTISDGTDVAIKVFNL--QLERAFRSFDSECEVLRNV 325
RA D + +GT S+G K SDG + K + E + SE +LR +
Sbjct: 4 RAED-YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL 62
Query: 326 RHRNLIKILSSYSNPDFKAL--VLEFMPNGSLEKWLYS---HNYFLDILERLNIMIDVGS 380
+H N+++ + L V+E+ G L + +LD L +M +
Sbjct: 63 KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL 122
Query: 381 ALEYLHNGHSSVH-IIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATI 439
AL+ H H ++H DLKP N+ LD + DFG+ ++L D+ + T
Sbjct: 123 ALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL--NHDTSFAKAFVGTP 180
Query: 440 GYMAPEYGLEGIVSAKCDVYSYGVLLME 467
YM+PE + K D++S G LL E
Sbjct: 181 YYMSPEQMNRMSYNEKSDIWSLGCLLYE 208
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 91/221 (41%), Gaps = 34/221 (15%)
Query: 280 LGTSSFGSVYKG------TISDGTDVAIKVFNLQLERAFRS-FDSECEVLRNVRHRNLIK 332
+G +FG V++ T VA+K+ + ++ F E ++ + N++K
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 333 ILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYF-----------------------LDIL 369
+L + L+ E+M G L ++L S + L
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 370 ERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDS 429
E+L I V + + YL S +H DL N L+ ENMV ++DFG+ + + +
Sbjct: 175 EQLCIARQVAAGMAYL----SERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYY 230
Query: 430 VRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
I +M PE + + DV++YGV+L E F+
Sbjct: 231 KADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 90/208 (43%), Gaps = 12/208 (5%)
Query: 269 RATDEFNECNLLGTSSFGSVYK-GTISDGTDVAIKVFNL--QLERAFRSFDSECEVLRNV 325
RA D + +GT S+G K SDG + K + E + SE +LR +
Sbjct: 4 RAED-YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL 62
Query: 326 RHRNLIKILSSYSNPDFKAL--VLEFMPNGSLEKWLYS---HNYFLDILERLNIMIDVGS 380
+H N+++ + L V+E+ G L + +LD L +M +
Sbjct: 63 KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL 122
Query: 381 ALEYLHNGHSSVH-IIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATI 439
AL+ H H ++H DLKP N+ LD + DFG+ ++L D+ + T
Sbjct: 123 ALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL--NHDTSFAKTFVGTP 180
Query: 440 GYMAPEYGLEGIVSAKCDVYSYGVLLME 467
YM+PE + K D++S G LL E
Sbjct: 181 YYMSPEQMNRMSYNEKSDIWSLGCLLYE 208
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 96/218 (44%), Gaps = 19/218 (8%)
Query: 265 LDIQRATDEFNECNLLGTSSFGSVY----KGTISDGTDVAIKVFNLQLERAFRSFD---S 317
+D + ++F+ LLG +FG V K T G A+K+ ++ A +
Sbjct: 3 MDPKVTMNDFDYLKLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVT 59
Query: 318 ECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID 377
E VL+N RH L + ++ D V+E+ G L L F + R +
Sbjct: 60 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAE 118
Query: 378 VGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEG-EDSVRQTMTM 436
+ SALEYLH S +++ D+K N++LD++ ++DFG+ K EG D
Sbjct: 119 IVSALEYLH----SRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFC 171
Query: 437 ATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRP 474
T Y+APE + D + GV++ E + P
Sbjct: 172 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 71/145 (48%), Gaps = 14/145 (9%)
Query: 367 DILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEG 426
DIL + I + + ALE+LH S + +IH D+KP+N+L++ + DFGI L
Sbjct: 153 DILGK--IAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL--- 204
Query: 427 EDSVRQTMTMATIGYMA-----PEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIG 481
DSV +T+ YMA PE +G S K D++S G+ ++E + P D
Sbjct: 205 VDSVAKTIDAGCKPYMAPERINPELNQKG-YSVKSDIWSLGITMIELAILRFPYDSWGTP 263
Query: 482 EMSLRRWVKESLPHGLTEVVDANLV 506
L++ V+E P + A V
Sbjct: 264 FQQLKQVVEEPSPQLPADKFSAEFV 288
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 77/162 (47%), Gaps = 27/162 (16%)
Query: 317 SECEVLRNVR-HRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIM 375
E ++LR V H N+I++ +Y F LV + M G L +L + L E IM
Sbjct: 59 KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-TEKVTLSEKETRKIM 117
Query: 376 IDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMT 435
+ + LH ++I+H DLKP NILLD++M ++DFG L GE +R+
Sbjct: 118 RALLEVICALHK----LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE-KLRE--V 170
Query: 436 MATIGYMAPE------------YGLEGIVSAKCDVYSYGVLL 465
T Y+APE YG E D++S GV++
Sbjct: 171 CGTPSYLAPEIIECSMNDNHPGYGKE------VDMWSTGVIM 206
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 95/211 (45%), Gaps = 18/211 (8%)
Query: 270 ATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNL--QLERAFRSFDSECEVLRNVR 326
+ + F + +G ++G VYK G VA+K L + E + E +L+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 327 HRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID-VGSALEYL 385
H N++K+L + LV EF+ + L+K F+D I + + S L L
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKK-------FMDASALTGIPLPLIKSYLFQL 115
Query: 386 HNGHSSVH---IIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYM 442
G + H ++H DLKP N+L++ ++DFG+ + G + + T+ Y
Sbjct: 116 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYR 173
Query: 443 APEYGLE-GIVSAKCDVYSYGVLLMETFTRK 472
APE L S D++S G + E TR+
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 95/211 (45%), Gaps = 18/211 (8%)
Query: 270 ATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNL--QLERAFRSFDSECEVLRNVR 326
+ + F + +G ++G VYK G VA+K L + E + E +L+ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 327 HRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID-VGSALEYL 385
H N++K+L + LV EF+ + L+K F+D I + + S L L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKK-------FMDASALTGIPLPLIKSYLFQL 112
Query: 386 HNGHSSVH---IIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYM 442
G + H ++H DLKP N+L++ ++DFG+ + G + + T+ Y
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYR 170
Query: 443 APEYGLE-GIVSAKCDVYSYGVLLMETFTRK 472
APE L S D++S G + E TR+
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 118/252 (46%), Gaps = 21/252 (8%)
Query: 236 MYIRCRNRNTKKSDHEDFLPLAIWRR--TSYLDIQR-ATDEFNECNLLGTSSFGSVYKGT 292
+Y C N ++ ++ L W + TS + R ++F ++G +FG V
Sbjct: 37 LYDECNNSPLRRE--KNILEYLEWAKPFTSKVKQMRLHREDFEILKVIGRGAFGEVAVVK 94
Query: 293 ISDGTDV-AIKVFNL--QLERAFRS-FDSECEVLRNVRHRNLIKILSSYSNPDFKALVLE 348
+ + V A+K+ N L+RA + F E +VL N + + + ++ + + LV++
Sbjct: 95 LKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMD 154
Query: 349 FMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDE 408
+ G L L L + ++ A++ +H +H +H D+KP NIL+D
Sbjct: 155 YYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQ----LHYVHRDIKPDNILMDM 210
Query: 409 NMVAHVSDFG-IYKLLGEGEDSVRQTMTMATIGYMAPEY-----GLEGIVSAKCDVYSYG 462
N ++DFG KL+ +G +V+ ++ + T Y++PE G +G +CD +S G
Sbjct: 211 NGHIRLADFGSCLKLMEDG--TVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLG 268
Query: 463 VLLMETFTRKRP 474
V + E + P
Sbjct: 269 VCMYEMLYGETP 280
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 95/211 (45%), Gaps = 18/211 (8%)
Query: 270 ATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNL--QLERAFRSFDSECEVLRNVR 326
+ + F + +G ++G VYK G VA+K L + E + E +L+ +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 327 HRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID-VGSALEYL 385
H N++K+L + LV EF+ + L+K F+D I + + S L L
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKK-------FMDASALTGIPLPLIKSYLFQL 114
Query: 386 HNGHSSVH---IIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYM 442
G + H ++H DLKP N+L++ ++DFG+ + G + + T+ Y
Sbjct: 115 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYR 172
Query: 443 APEYGLE-GIVSAKCDVYSYGVLLMETFTRK 472
APE L S D++S G + E TR+
Sbjct: 173 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 95/211 (45%), Gaps = 18/211 (8%)
Query: 270 ATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNL--QLERAFRSFDSECEVLRNVR 326
+ + F + +G ++G VYK G VA+K L + E + E +L+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 327 HRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID-VGSALEYL 385
H N++K+L + LV EF+ + L+K F+D I + + S L L
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKK-------FMDASALTGIPLPLIKSYLFQL 115
Query: 386 HNGHSSVH---IIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYM 442
G + H ++H DLKP N+L++ ++DFG+ + G + + T+ Y
Sbjct: 116 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYR 173
Query: 443 APEYGLE-GIVSAKCDVYSYGVLLMETFTRK 472
APE L S D++S G + E TR+
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 95/211 (45%), Gaps = 18/211 (8%)
Query: 270 ATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNL--QLERAFRSFDSECEVLRNVR 326
+ + F + +G ++G VYK G VA+K L + E + E +L+ +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 327 HRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID-VGSALEYL 385
H N++K+L + LV EF+ + L+K F+D I + + S L L
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKK-------FMDASALTGIPLPLIKSYLFQL 114
Query: 386 HNGHSSVH---IIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYM 442
G + H ++H DLKP N+L++ ++DFG+ + G + + T+ Y
Sbjct: 115 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYR 172
Query: 443 APEYGLE-GIVSAKCDVYSYGVLLMETFTRK 472
APE L S D++S G + E TR+
Sbjct: 173 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 95/211 (45%), Gaps = 18/211 (8%)
Query: 270 ATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNL--QLERAFRSFDSECEVLRNVR 326
+ + F + +G ++G VYK G VA+K L + E + E +L+ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 327 HRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID-VGSALEYL 385
H N++K+L + LV EF+ + L+K F+D I + + S L L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKK-------FMDASALTGIPLPLIKSYLFQL 112
Query: 386 HNGHSSVH---IIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYM 442
G + H ++H DLKP N+L++ ++DFG+ + G + + T+ Y
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYR 170
Query: 443 APEYGLE-GIVSAKCDVYSYGVLLMETFTRK 472
APE L S D++S G + E TR+
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 92/210 (43%), Gaps = 19/210 (9%)
Query: 266 DIQRATDEFNECNLLGTSSFGSVYKGTI----SDGTDVAIKVF-NLQLERAFRSFDSECE 320
+IQR E C +G FG V++G + VAIK N + F E
Sbjct: 6 EIQRERIELGRC--IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 321 VLRNVRHRNLIKILSSYS-NPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVG 379
+R H +++K++ + NP + +++E G L +L + LD+ + +
Sbjct: 64 TMRQFDHPHIVKLIGVITENPVW--IIMELCTLGELRSFLQVRKFSLDLASLILYAYQLS 121
Query: 380 SALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSV--RQTMTMA 437
+AL YL S +H D+ N+L+ + DFG+ + + EDS + +
Sbjct: 122 TALAYLE----SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYM---EDSTYYKASKGKL 174
Query: 438 TIGYMAPEYGLEGIVSAKCDVYSYGVLLME 467
I +MAPE ++ DV+ +GV + E
Sbjct: 175 PIKWMAPESINFRRFTSASDVWMFGVCMWE 204
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 95/211 (45%), Gaps = 18/211 (8%)
Query: 270 ATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNL--QLERAFRSFDSECEVLRNVR 326
+ + F + +G ++G VYK G VA+K L + E + E +L+ +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 327 HRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID-VGSALEYL 385
H N++K+L + LV EF+ + L+K F+D I + + S L L
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKK-------FMDASALTGIPLPLIKSYLFQL 113
Query: 386 HNGHSSVH---IIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYM 442
G + H ++H DLKP N+L++ ++DFG+ + G + + T+ Y
Sbjct: 114 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYR 171
Query: 443 APEYGLE-GIVSAKCDVYSYGVLLMETFTRK 472
APE L S D++S G + E TR+
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 77/162 (47%), Gaps = 27/162 (16%)
Query: 317 SECEVLRNVR-HRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIM 375
E ++LR V H N+I++ +Y F LV + M G L +L + L E IM
Sbjct: 72 KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-TEKVTLSEKETRKIM 130
Query: 376 IDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMT 435
+ + LH ++I+H DLKP NILLD++M ++DFG L GE +R+
Sbjct: 131 RALLEVICALHK----LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE-KLRE--V 183
Query: 436 MATIGYMAPE------------YGLEGIVSAKCDVYSYGVLL 465
T Y+APE YG E D++S GV++
Sbjct: 184 CGTPSYLAPEIIECSMNDNHPGYGKE------VDMWSTGVIM 219
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 95/211 (45%), Gaps = 18/211 (8%)
Query: 270 ATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNL--QLERAFRSFDSECEVLRNVR 326
+ + F + +G ++G VYK G VA+K L + E + E +L+ +
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 327 HRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID-VGSALEYL 385
H N++K+L + LV EF+ + L+K F+D I + + S L L
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKK-------FMDASALTGIPLPLIKSYLFQL 116
Query: 386 HNGHSSVH---IIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYM 442
G + H ++H DLKP N+L++ ++DFG+ + G + + T+ Y
Sbjct: 117 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYR 174
Query: 443 APEYGLE-GIVSAKCDVYSYGVLLMETFTRK 472
APE L S D++S G + E TR+
Sbjct: 175 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 18/209 (8%)
Query: 272 DEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNL--QLERAFRSFDSECEVLRNVRHR 328
+ F + +G ++G VYK G VA+K L + E + E +L+ + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 329 NLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID-VGSALEYLHN 387
N++K+L + LV EF+ + L+K F+D I + + S L L
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKK-------FMDASALTGIPLPLIKSYLFQLLQ 113
Query: 388 GHSSVH---IIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAP 444
G + H ++H DLKP N+L++ ++DFG+ + G + + T+ Y AP
Sbjct: 114 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 171
Query: 445 EYGLE-GIVSAKCDVYSYGVLLMETFTRK 472
E L S D++S G + E TR+
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 93/215 (43%), Gaps = 20/215 (9%)
Query: 280 LGTSSFGSVYKGT-ISDGTDVAIKVFNL------QLERAFRSFDSECEVLRNVRHRNLIK 332
+G +F V I G +VA+K+ + L++ FR E +++ + H N++K
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR----EVRIMKVLNHPNIVK 77
Query: 333 ILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSV 392
+ LV+E+ G + +L +H + R + SA++Y H
Sbjct: 78 LFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF--- 133
Query: 393 HIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPE-YGLEGI 451
I+H DLK N+LLD +M ++DFG G + + Y APE + +
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN---KLDTFCGSPPYAAPELFQGKKY 189
Query: 452 VSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLR 486
+ DV+S GV+L + P D + E+ R
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRER 224
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 95/211 (45%), Gaps = 18/211 (8%)
Query: 270 ATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNL--QLERAFRSFDSECEVLRNVR 326
+ + F + +G ++G VYK G VA+K L + E + E +L+ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 327 HRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID-VGSALEYL 385
H N++K+L + LV EF+ + L+K F+D I + + S L L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKK-------FMDASALTGIPLPLIKSYLFQL 112
Query: 386 HNGHSSVH---IIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYM 442
G + H ++H DLKP N+L++ ++DFG+ + G + + T+ Y
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYR 170
Query: 443 APEYGLE-GIVSAKCDVYSYGVLLMETFTRK 472
APE L S D++S G + E TR+
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 105/234 (44%), Gaps = 39/234 (16%)
Query: 255 PLAIWRRTSYLDIQRATDEFNECNLLGTSSFGSVYKGTI---------------SDGTDV 299
P I + YLD + T E E LG+ +FG+V KG ++ D
Sbjct: 355 PEEIRPKEVYLDRKLLTLEDKE---LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDP 411
Query: 300 AIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWL 359
A+K L +E V++ + + +++++ + LV+E G L K+L
Sbjct: 412 ALKDELL----------AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYL 460
Query: 360 YSHNYFLD--ILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDF 417
+ + D I+E ++ V ++YL + +H DL N+LL A +SDF
Sbjct: 461 QQNRHVKDKNIIE---LVHQVSMGMKYLEESN----FVHRDLAARNVLLVTQHYAKISDF 513
Query: 418 GIYKLLGEGEDSVR-QTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
G+ K L E+ + QT + + APE S+K DV+S+GVL+ E F+
Sbjct: 514 GLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 18/209 (8%)
Query: 272 DEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNL--QLERAFRSFDSECEVLRNVRHR 328
+ F + +G ++G VYK G VA+K L + E + E +L+ + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 329 NLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID-VGSALEYLHN 387
N++K+L + LV EF+ + L+K F+D I + + S L L
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKK-------FMDASALTGIPLPLIKSYLFQLLQ 113
Query: 388 GHSSVH---IIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAP 444
G + H ++H DLKP N+L++ ++DFG+ + G + + T+ Y AP
Sbjct: 114 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 171
Query: 445 EYGLE-GIVSAKCDVYSYGVLLMETFTRK 472
E L S D++S G + E TR+
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 93/211 (44%), Gaps = 19/211 (9%)
Query: 272 DEFNECNLLGTSSFGSVY----KGTISDGTDVAIKVFNLQLERAFRSFD---SECEVLRN 324
++F+ LLG +FG V K T G A+K+ ++ A +E VL+N
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 325 VRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEY 384
RH L + ++ D V+E+ G L L F + R ++ SALEY
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEY 120
Query: 385 LHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEG-EDSVRQTMTMATIGYMA 443
LH S +++ D+K N++LD++ ++DFG+ K EG D T Y+A
Sbjct: 121 LH----SRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKTFCGTPEYLA 173
Query: 444 PEYGLEGIVSAKCDVYSYGVLLMETFTRKRP 474
PE + D + GV++ E + P
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 93/215 (43%), Gaps = 20/215 (9%)
Query: 280 LGTSSFGSVYKGT-ISDGTDVAIKVFNL------QLERAFRSFDSECEVLRNVRHRNLIK 332
+G +F V I G +VA+K+ + L++ FR E +++ + H N++K
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR----EVRIMKVLNHPNIVK 77
Query: 333 ILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSV 392
+ LV+E+ G + +L +H + R + SA++Y H
Sbjct: 78 LFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF--- 133
Query: 393 HIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPE-YGLEGI 451
I+H DLK N+LLD +M ++DFG G + + Y APE + +
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN---KLDTFCGSPPYAAPELFQGKKY 189
Query: 452 VSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLR 486
+ DV+S GV+L + P D + E+ R
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRER 224
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 105/234 (44%), Gaps = 39/234 (16%)
Query: 255 PLAIWRRTSYLDIQRATDEFNECNLLGTSSFGSVYKGTI---------------SDGTDV 299
P I + YLD + T E E LG+ +FG+V KG ++ D
Sbjct: 356 PEEIRPKEVYLDRKLLTLEDKE---LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDP 412
Query: 300 AIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWL 359
A+K L +E V++ + + +++++ + LV+E G L K+L
Sbjct: 413 ALKDELL----------AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYL 461
Query: 360 YSHNYFLD--ILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDF 417
+ + D I+E ++ V ++YL + +H DL N+LL A +SDF
Sbjct: 462 QQNRHVKDKNIIE---LVHQVSMGMKYLEESN----FVHRDLAARNVLLVTQHYAKISDF 514
Query: 418 GIYKLLGEGEDSVR-QTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
G+ K L E+ + QT + + APE S+K DV+S+GVL+ E F+
Sbjct: 515 GLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 106/220 (48%), Gaps = 27/220 (12%)
Query: 271 TDEFNECNLLGTSSFGSVYKGTISD-GTDVAIK---VFNLQLERAFRSFDSECEVLRNVR 326
+ +F +LLG ++G V T G VAIK F+ L A R+ E ++L++ +
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPL-FALRTL-REIKILKHFK 67
Query: 327 HRNLIKILS-----SYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSA 381
H N+I I + S+ N + ++ E M L + + + D ++ + A
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELM-QTDLHRVISTQMLSDDHIQYF--IYQTLRA 124
Query: 382 LEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGE-----GEDSVRQ---T 433
++ LH + +IH DLKP+N+L++ N V DFG+ +++ E E + +Q T
Sbjct: 125 VKVLHGSN----VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMT 180
Query: 434 MTMATIGYMAPEYGL-EGIVSAKCDVYSYGVLLMETFTRK 472
+AT Y APE L S DV+S G +L E F R+
Sbjct: 181 EYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 93/211 (44%), Gaps = 19/211 (9%)
Query: 272 DEFNECNLLGTSSFGSVY----KGTISDGTDVAIKVFNLQLERAFRSFD---SECEVLRN 324
++F+ LLG +FG V K T G A+K+ ++ A +E VL+N
Sbjct: 8 NDFDYLKLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 64
Query: 325 VRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEY 384
RH L + ++ D V+E+ G L L F + R ++ SALEY
Sbjct: 65 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEY 123
Query: 385 LHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEG-EDSVRQTMTMATIGYMA 443
LH S +++ D+K N++LD++ ++DFG+ K EG D T Y+A
Sbjct: 124 LH----SRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKTFCGTPEYLA 176
Query: 444 PEYGLEGIVSAKCDVYSYGVLLMETFTRKRP 474
PE + D + GV++ E + P
Sbjct: 177 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 207
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 93/211 (44%), Gaps = 19/211 (9%)
Query: 272 DEFNECNLLGTSSFGSVY----KGTISDGTDVAIKVFNLQLERAFRSFD---SECEVLRN 324
++F+ LLG +FG V K T G A+K+ ++ A +E VL+N
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 325 VRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEY 384
RH L + ++ D V+E+ G L L F + R ++ SALEY
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEY 120
Query: 385 LHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEG-EDSVRQTMTMATIGYMA 443
LH S +++ D+K N++LD++ ++DFG+ K EG D T Y+A
Sbjct: 121 LH----SRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKTFCGTPEYLA 173
Query: 444 PEYGLEGIVSAKCDVYSYGVLLMETFTRKRP 474
PE + D + GV++ E + P
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 75/161 (46%), Gaps = 27/161 (16%)
Query: 318 ECEVLRNVR-HRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 376
E ++LR V H N+I++ +Y F LV + M G L +L + L E IM
Sbjct: 73 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-TEKVTLSEKETRKIMR 131
Query: 377 DVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTM 436
+ + LH ++I+H DLKP NILLD++M ++DFG L GE +
Sbjct: 132 ALLEVICALHK----LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE---KLRSVC 184
Query: 437 ATIGYMAPE------------YGLEGIVSAKCDVYSYGVLL 465
T Y+APE YG E D++S GV++
Sbjct: 185 GTPSYLAPEIIECSMNDNHPGYGKE------VDMWSTGVIM 219
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 102/224 (45%), Gaps = 38/224 (16%)
Query: 272 DEFNECNLLGTSSFGSVYKGTIS-DGTDVAIK----VFNLQLERAFRSFDSECEVLRNVR 326
DE+ +G ++G V G VAIK F++ + A R+ E ++L++ +
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDV-VTNAKRTL-RELKILKHFK 112
Query: 327 HRNLIKI----LSSYSNPDFKAL--VLEFMPNGSLEKWLYSHN--------YFLDILERL 372
H N+I I + +FK++ VL+ M L + ++S YFL L R
Sbjct: 113 HDNIIAIKDILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQPLTLEHVRYFLYQLLR- 170
Query: 373 NIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLL--GEGEDSV 430
L+Y+H S +IH DLKP+N+L++EN + DFG+ + L E
Sbjct: 171 --------GLKYMH----SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQY 218
Query: 431 RQTMTMATIGYMAPEYGLE-GIVSAKCDVYSYGVLLMETFTRKR 473
T +AT Y APE L + D++S G + E R++
Sbjct: 219 FMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 95/211 (45%), Gaps = 18/211 (8%)
Query: 270 ATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNL--QLERAFRSFDSECEVLRNVR 326
+ + F + +G ++G VYK G VA+K L + E + E +L+ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 327 HRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID-VGSALEYL 385
H N++K+L + LV EF+ + L+K F+D I + + S L L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKK-------FMDASALTGIPLPLIKSYLFQL 112
Query: 386 HNGHSSVH---IIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYM 442
G + H ++H DLKP N+L++ ++DFG+ + G + + T+ Y
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYR 170
Query: 443 APEYGLE-GIVSAKCDVYSYGVLLMETFTRK 472
APE L S D++S G + E TR+
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 95/211 (45%), Gaps = 18/211 (8%)
Query: 270 ATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNL--QLERAFRSFDSECEVLRNVR 326
+ + F + +G ++G VYK G VA+K L + E + E +L+ +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 327 HRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID-VGSALEYL 385
H N++K+L + LV EF+ + L+K F+D I + + S L L
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKK-------FMDASALTGIPLPLIKSYLFQL 114
Query: 386 HNGHSSVH---IIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYM 442
G + H ++H DLKP N+L++ ++DFG+ + G + + T+ Y
Sbjct: 115 LQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYR 172
Query: 443 APEYGLE-GIVSAKCDVYSYGVLLMETFTRK 472
APE L S D++S G + E TR+
Sbjct: 173 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 93/211 (44%), Gaps = 19/211 (9%)
Query: 272 DEFNECNLLGTSSFGSVY----KGTISDGTDVAIKVFNLQLERAFRSFD---SECEVLRN 324
++F+ LLG +FG V K T G A+K+ ++ A +E VL+N
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 325 VRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEY 384
RH L + ++ D V+E+ G L L F + R ++ SALEY
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEY 120
Query: 385 LHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEG-EDSVRQTMTMATIGYMA 443
LH S +++ D+K N++LD++ ++DFG+ K EG D T Y+A
Sbjct: 121 LH----SRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCGTPEYLA 173
Query: 444 PEYGLEGIVSAKCDVYSYGVLLMETFTRKRP 474
PE + D + GV++ E + P
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 18/209 (8%)
Query: 272 DEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNL--QLERAFRSFDSECEVLRNVRHR 328
+ F + +G ++G VYK G VA+K L + E + E +L+ + H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 329 NLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID-VGSALEYLHN 387
N++K+L + LV EF+ + L+K F+D I + + S L L
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFL-HQDLKK-------FMDASALTGIPLPLIKSYLFQLLQ 115
Query: 388 GHSSVH---IIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAP 444
G + H ++H DLKP N+L++ ++DFG+ + G + + T+ Y AP
Sbjct: 116 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 173
Query: 445 EYGLE-GIVSAKCDVYSYGVLLMETFTRK 472
E L S D++S G + E TR+
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 93/211 (44%), Gaps = 19/211 (9%)
Query: 272 DEFNECNLLGTSSFGSVY----KGTISDGTDVAIKVFNLQLERAFRSFD---SECEVLRN 324
++F+ LLG +FG V K T G A+K+ ++ A +E VL+N
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 325 VRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEY 384
RH L + ++ D V+E+ G L L F + R ++ SALEY
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEY 120
Query: 385 LHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEG-EDSVRQTMTMATIGYMA 443
LH S +++ D+K N++LD++ ++DFG+ K EG D T Y+A
Sbjct: 121 LH----SRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCGTPEYLA 173
Query: 444 PEYGLEGIVSAKCDVYSYGVLLMETFTRKRP 474
PE + D + GV++ E + P
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 100/220 (45%), Gaps = 22/220 (10%)
Query: 273 EFNECNL-----LGTSSFGSVYKGT-ISDGTDVAIKVFNLQLERAFRSFD------SECE 320
EF NL LG +FG V + T G + A+ +++ ++ D SE +
Sbjct: 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 101
Query: 321 VLRNV-RHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVG 379
++ ++ +H N++ +L + ++ ++ E+ G L +L + L+ I
Sbjct: 102 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTL 161
Query: 380 SALEYLHNGH---------SSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSV 430
S + LH +S + IH D+ N+LL VA + DFG+ + + + +
Sbjct: 162 STRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 221
Query: 431 RQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
+ + +MAPE + + + + DV+SYG+LL E F+
Sbjct: 222 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 95/211 (45%), Gaps = 18/211 (8%)
Query: 270 ATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNL--QLERAFRSFDSECEVLRNVR 326
+ + F + +G ++G VYK G VA+K L + E + E +L+ +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 327 HRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID-VGSALEYL 385
H N++K+L + LV EF+ + L+K F+D I + + S L L
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKK-------FMDASALTGIPLPLIKSYLFQL 113
Query: 386 HNGHSSVH---IIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYM 442
G + H ++H DLKP N+L++ ++DFG+ + G + + T+ Y
Sbjct: 114 LQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYR 171
Query: 443 APEYGLE-GIVSAKCDVYSYGVLLMETFTRK 472
APE L S D++S G + E TR+
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 94/218 (43%), Gaps = 21/218 (9%)
Query: 274 FNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQ-LERAF--------RSFDSECEVLRN 324
F +LG +G V++ G + K+F ++ L++A +E +L
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTG-KIFAMKVLKKAMIVRNAKDTAHTKAERNILEE 77
Query: 325 VRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEY 384
V+H ++ ++ ++ L+LE++ G L L F++ + ++ AL +
Sbjct: 78 VKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACF-YLAEISMALGH 136
Query: 385 LHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAP 444
LH II+ DLKP NI+L+ ++DFG+ K D TI YMAP
Sbjct: 137 LHQKG----IIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHXFCGTIEYMAP 190
Query: 445 EYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGE 482
E + + D +S G L+ + T P F GE
Sbjct: 191 EILMRSGHNRAVDWWSLGALMYDMLTGAPP----FTGE 224
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 95/210 (45%), Gaps = 20/210 (9%)
Query: 272 DEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNL--QLERAFRSFDSECEVLRNVRHR 328
+ F + +G ++G VYK G VA+ L + E + E +L+ + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 329 NLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID-VGSALEYLHN 387
N++K+L + LV EF+ + L+K F+D I + + S L L
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKK-------FMDASALTGIPLPLIKSYLFQLLQ 114
Query: 388 GHSSVH---IIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQ-TMTMATIGYMA 443
G + H ++H DLKP N+L++ ++DFG+ + G VR T + T+ Y A
Sbjct: 115 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV---PVRTYTHEVVTLWYRA 171
Query: 444 PEYGLE-GIVSAKCDVYSYGVLLMETFTRK 472
PE L S D++S G + E TR+
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 95/210 (45%), Gaps = 20/210 (9%)
Query: 272 DEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNL--QLERAFRSFDSECEVLRNVRHR 328
+ F + +G ++G VYK G VA+ L + E + E +L+ + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 329 NLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID-VGSALEYLHN 387
N++K+L + LV EF+ + L+K F+D I + + S L L
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKK-------FMDASALTGIPLPLIKSYLFQLLQ 113
Query: 388 GHSSVH---IIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQ-TMTMATIGYMA 443
G + H ++H DLKP N+L++ ++DFG+ + G VR T + T+ Y A
Sbjct: 114 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV---PVRTYTHEVVTLWYRA 170
Query: 444 PEYGLE-GIVSAKCDVYSYGVLLMETFTRK 472
PE L S D++S G + E TR+
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 96/217 (44%), Gaps = 23/217 (10%)
Query: 272 DEFNECNLLGTSSFGSVYKGTISDGTDV----AIKVFN----LQLERAFRSFDSECEVLR 323
+ F +LGT ++G V+ G D A+KV +Q + +E +VL
Sbjct: 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 113
Query: 324 NVRHRNLIKILSSYSNPDFK-ALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGS-- 380
++R + L + K L+L+++ G L L F + + I VG
Sbjct: 114 HIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTE----HEVQIYVGEIV 169
Query: 381 -ALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATI 439
ALE+LH + II+ D+K NILLD N ++DFG+ K +++ R TI
Sbjct: 170 LALEHLHK----LGIIYRDIKLENILLDSNGHVVLTDFGLSKEF-VADETERAYDFCGTI 224
Query: 440 GYMAPEY--GLEGIVSAKCDVYSYGVLLMETFTRKRP 474
YMAP+ G + D +S GVL+ E T P
Sbjct: 225 EYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASP 261
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 92/215 (42%), Gaps = 20/215 (9%)
Query: 280 LGTSSFGSVYKGT-ISDGTDVAIKVFNL------QLERAFRSFDSECEVLRNVRHRNLIK 332
+G +F V I G +VA+K+ + L++ FR E +++ + H N++K
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR----EVRIMKVLNHPNIVK 77
Query: 333 ILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSV 392
+ LV+E+ G + +L +H + R + SA++Y H
Sbjct: 78 LFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF--- 133
Query: 393 HIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPE-YGLEGI 451
I+H DLK N+LLD +M ++DFG G + Y APE + +
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN---KLDAFCGAPPYAAPELFQGKKY 189
Query: 452 VSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLR 486
+ DV+S GV+L + P D + E+ R
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRER 224
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 94/218 (43%), Gaps = 21/218 (9%)
Query: 274 FNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQ-LERAF--------RSFDSECEVLRN 324
F +LG +G V++ G + K+F ++ L++A +E +L
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTG-KIFAMKVLKKAMIVRNAKDTAHTKAERNILEE 77
Query: 325 VRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEY 384
V+H ++ ++ ++ L+LE++ G L L F++ + ++ AL +
Sbjct: 78 VKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACF-YLAEISMALGH 136
Query: 385 LHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAP 444
LH II+ DLKP NI+L+ ++DFG+ K D TI YMAP
Sbjct: 137 LHQKG----IIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHTFCGTIEYMAP 190
Query: 445 EYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGE 482
E + + D +S G L+ + T P F GE
Sbjct: 191 EILMRSGHNRAVDWWSLGALMYDMLTGAPP----FTGE 224
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 108/244 (44%), Gaps = 36/244 (14%)
Query: 252 DFLPLA--IWRRTSYLDIQRATDEFNECNLLGTSSFGSVYKGTISD-GTDVAIKVFNL-- 306
DFL A I R + +QR D+F ++G +F V + G A+K+ N
Sbjct: 41 DFLQWAEPIVVRLKEVRLQR--DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWD 98
Query: 307 QLERAFRS-FDSECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYF 365
L+R S F E +VL N R + ++ ++ + ++ LV+E+ G L
Sbjct: 99 MLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDL---------- 148
Query: 366 LDILERLNIMIDVGSALEYLHN---GHSSVH---IIHCDLKPTNILLDENMVAHVSDFG- 418
L +L + I A YL SVH +H D+KP NILLD ++DFG
Sbjct: 149 LTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGS 208
Query: 419 IYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSA--------KCDVYSYGVLLMETFT 470
KL +G +VR + + T Y++PE L+ + +CD ++ GV E F
Sbjct: 209 CLKLRADG--TVRSLVAVGTPDYLSPEI-LQAVGGGPGTGSYGPECDWWALGVFAYEMFY 265
Query: 471 RKRP 474
+ P
Sbjct: 266 GQTP 269
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 95/211 (45%), Gaps = 18/211 (8%)
Query: 270 ATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNL--QLERAFRSFDSECEVLRNVR 326
+ + F + +G ++G VYK G VA+K L + E + E +L+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 327 HRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID-VGSALEYL 385
H N++K+L + LV EF+ + L+K F+D I + + S L L
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-SMDLKK-------FMDASALTGIPLPLIKSYLFQL 115
Query: 386 HNGHSSVH---IIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYM 442
G + H ++H DLKP N+L++ ++DFG+ + G + + T+ Y
Sbjct: 116 LQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYR 173
Query: 443 APEYGLE-GIVSAKCDVYSYGVLLMETFTRK 472
APE L S D++S G + E TR+
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 93/215 (43%), Gaps = 20/215 (9%)
Query: 280 LGTSSFGSVYKGT-ISDGTDVAIKVFN------LQLERAFRSFDSECEVLRNVRHRNLIK 332
+G +F V I G +VAIK+ + L++ FR E +++ + H N++K
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR----EVRIMKILNHPNIVK 75
Query: 333 ILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSV 392
+ L++E+ G + +L +H + R + SA++Y H
Sbjct: 76 LFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-QIVSAVQYCHQKR--- 131
Query: 393 HIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPE-YGLEGI 451
I+H DLK N+LLD +M ++DFG G + + Y APE + +
Sbjct: 132 -IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG---KLDTFCGSPPYAAPELFQGKKY 187
Query: 452 VSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLR 486
+ DV+S GV+L + P D + E+ R
Sbjct: 188 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRER 222
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 92/215 (42%), Gaps = 20/215 (9%)
Query: 280 LGTSSFGSVYKGT-ISDGTDVAIKVFN------LQLERAFRSFDSECEVLRNVRHRNLIK 332
+G +F V I G +VAIK+ + L++ FR E +++ + H N++K
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR----EVRIMKILNHPNIVK 78
Query: 333 ILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSV 392
+ L++E+ G + +L +H + R + SA++Y H
Sbjct: 79 LFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-QIVSAVQYCHQKR--- 134
Query: 393 HIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPE-YGLEGI 451
I+H DLK N+LLD +M ++DFG G + Y APE + +
Sbjct: 135 -IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG---KLDAFCGAPPYAAPELFQGKKY 190
Query: 452 VSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLR 486
+ DV+S GV+L + P D + E+ R
Sbjct: 191 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRER 225
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 95/211 (45%), Gaps = 18/211 (8%)
Query: 270 ATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNL--QLERAFRSFDSECEVLRNVR 326
+ + F + +G ++G VYK G VA+K L + E + E +L+ +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 327 HRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID-VGSALEYL 385
H N++K+L + LV EF+ + L+K F+D I + + S L L
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-SMDLKK-------FMDASALTGIPLPLIKSYLFQL 113
Query: 386 HNGHSSVH---IIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYM 442
G + H ++H DLKP N+L++ ++DFG+ + G + + T+ Y
Sbjct: 114 LQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYR 171
Query: 443 APEYGLE-GIVSAKCDVYSYGVLLMETFTRK 472
APE L S D++S G + E TR+
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 93/211 (44%), Gaps = 19/211 (9%)
Query: 272 DEFNECNLLGTSSFGSVY----KGTISDGTDVAIKVFNLQLERAFRSFD---SECEVLRN 324
++F+ LLG +FG V K T G A+K+ ++ A +E VL+N
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 325 VRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEY 384
RH L + ++ D V+E+ G L L F + R ++ SALEY
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEY 120
Query: 385 LHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEG-EDSVRQTMTMATIGYMA 443
LH S +++ D+K N++LD++ ++DFG+ K EG D T Y+A
Sbjct: 121 LH----SRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCGTPEYLA 173
Query: 444 PEYGLEGIVSAKCDVYSYGVLLMETFTRKRP 474
PE + D + GV++ E + P
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 96/218 (44%), Gaps = 18/218 (8%)
Query: 265 LDIQRATDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRN 324
L I+ ++F +LG SFG V+ T+ + L+ + D EC ++
Sbjct: 11 LQIKLKIEDFELHKMLGKGSFGKVFLAEFK-KTNQFFAIKALKKDVVLMDDDVECTMVEK 69
Query: 325 ------VRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDV 378
H L + ++ + V+E++ G L + S + F D+ ++
Sbjct: 70 RVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKF-DLSRATFYAAEI 128
Query: 379 GSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYK--LLGEGEDSVRQTMTM 436
L++LH S I++ DLK NILLD++ ++DFG+ K +LG+ +
Sbjct: 129 ILGLQFLH----SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDA----KTNEFC 180
Query: 437 ATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRP 474
T Y+APE L + D +S+GVLL E + P
Sbjct: 181 GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 218
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 102/224 (45%), Gaps = 38/224 (16%)
Query: 272 DEFNECNLLGTSSFGSVYKGTIS-DGTDVAIK----VFNLQLERAFRSFDSECEVLRNVR 326
DE+ +G ++G V G VAIK F++ + A R+ E ++L++ +
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDV-VTNAKRTL-RELKILKHFK 111
Query: 327 HRNLIKI----LSSYSNPDFKAL--VLEFMPNGSLEKWLYSHN--------YFLDILERL 372
H N+I I + +FK++ VL+ M L + ++S YFL L R
Sbjct: 112 HDNIIAIKDILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQPLTLEHVRYFLYQLLR- 169
Query: 373 NIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLL--GEGEDSV 430
L+Y+H S +IH DLKP+N+L++EN + DFG+ + L E
Sbjct: 170 --------GLKYMH----SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQY 217
Query: 431 RQTMTMATIGYMAPEYGLE-GIVSAKCDVYSYGVLLMETFTRKR 473
T +AT Y APE L + D++S G + E R++
Sbjct: 218 FMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 104/234 (44%), Gaps = 39/234 (16%)
Query: 255 PLAIWRRTSYLDIQRATDEFNECNLLGTSSFGSVYKGTI---------------SDGTDV 299
P I + YLD + T E E LG+ +FG+V KG ++ D
Sbjct: 11 PEEIRPKEVYLDRKLLTLEDKE---LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDP 67
Query: 300 AIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWL 359
A+K +E V++ + + +++++ + LV+E G L K+L
Sbjct: 68 ALK----------DELLAEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYL 116
Query: 360 YSHNYFLD--ILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDF 417
+ + D I+E ++ V ++YL + +H DL N+LL A +SDF
Sbjct: 117 QQNRHVKDKNIIE---LVHQVSMGMKYLEESN----FVHRDLAARNVLLVTQHYAKISDF 169
Query: 418 GIYKLLGEGEDSVR-QTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
G+ K L E+ + QT + + APE S+K DV+S+GVL+ E F+
Sbjct: 170 GLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 223
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 95/205 (46%), Gaps = 22/205 (10%)
Query: 272 DEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDS----ECEVLRNVRH 327
++++ +G ++G VYK + G A+K ++LE+ S E +L+ ++H
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALK--KIRLEKEDEGIPSTTIREISILKELKH 59
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
N++K+ LV E + + L+K LD+ E + S L L N
Sbjct: 60 SNIVKLYDVIHTKKRLVLVFEHL-DQDLKK-------LLDVCEGGLESVTAKSFLLQLLN 111
Query: 388 GHSSVH---IIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQ-TMTMATIGYMA 443
G + H ++H DLKP N+L++ ++DFG+ + G VR+ T + T+ Y A
Sbjct: 112 GIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFG---IPVRKYTHEIVTLWYRA 168
Query: 444 PEYGL-EGIVSAKCDVYSYGVLLME 467
P+ + S D++S G + E
Sbjct: 169 PDVLMGSKKYSTTIDIWSVGCIFAE 193
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 104/234 (44%), Gaps = 39/234 (16%)
Query: 255 PLAIWRRTSYLDIQRATDEFNECNLLGTSSFGSVYKGTI---------------SDGTDV 299
P I + YLD + T E E LG+ +FG+V KG ++ D
Sbjct: 13 PEEIRPKEVYLDRKLLTLEDKE---LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDP 69
Query: 300 AIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWL 359
A+K +E V++ + + +++++ + LV+E G L K+L
Sbjct: 70 ALK----------DELLAEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYL 118
Query: 360 YSHNYFLD--ILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDF 417
+ + D I+E ++ V ++YL + +H DL N+LL A +SDF
Sbjct: 119 QQNRHVKDKNIIE---LVHQVSMGMKYLEESN----FVHRDLAARNVLLVTQHYAKISDF 171
Query: 418 GIYKLLGEGEDSVR-QTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
G+ K L E+ + QT + + APE S+K DV+S+GVL+ E F+
Sbjct: 172 GLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 104/234 (44%), Gaps = 39/234 (16%)
Query: 255 PLAIWRRTSYLDIQRATDEFNECNLLGTSSFGSVYKGTI---------------SDGTDV 299
P I + YLD + T E E LG+ +FG+V KG ++ D
Sbjct: 13 PEEIRPKEVYLDRKLLTLEDKE---LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDP 69
Query: 300 AIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWL 359
A+K +E V++ + + +++++ + LV+E G L K+L
Sbjct: 70 ALK----------DELLAEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYL 118
Query: 360 YSHNYFLD--ILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDF 417
+ + D I+E ++ V ++YL + +H DL N+LL A +SDF
Sbjct: 119 QQNRHVKDKNIIE---LVHQVSMGMKYLEESN----FVHRDLAARNVLLVTQHYAKISDF 171
Query: 418 GIYKLLGEGEDSVR-QTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
G+ K L E+ + QT + + APE S+K DV+S+GVL+ E F+
Sbjct: 172 GLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 28/160 (17%)
Query: 317 SECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLN--- 373
E VL+ + H N++K+ + + LV+E G L F +I+ R+
Sbjct: 85 EEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGEL---------FDEIIHRMKFNE 135
Query: 374 -----IMIDVGSALEYLHNGHSSVHIIHCDLKPTNILL---DENMVAHVSDFGIYKLLGE 425
I+ V S + YLH + I+H DLKP N+LL +++ + + DFG+ +
Sbjct: 136 VDAAVIIKQVLSGVTYLHKHN----IVHRDLKPENLLLESKEKDALIKIVDFGLSAVF-- 189
Query: 426 GEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLL 465
E+ + + T Y+APE L KCDV+S GV+L
Sbjct: 190 -ENQKKMKERLGTAYYIAPEV-LRKKYDEKCDVWSIGVIL 227
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 99/226 (43%), Gaps = 34/226 (15%)
Query: 271 TDEFNECNLLGTSSFGSVYKGTISDGTD--VAIKVFNLQLERAFRSFDSECEVLRNVRHR 328
+D F + LG + VY+ GT A+KV +++ + +E VL + H
Sbjct: 52 SDFFEVESELGRGATSIVYRCK-QKGTQKPYALKVLKKTVDK--KIVRTEIGVLLRLSHP 108
Query: 329 NLIKILSSYSNPDFKALVLEFMPNGSL-----EKWLYSHNYFLDILERLNIMIDVGSALE 383
N+IK+ + P +LVLE + G L EK YS D +++ + A+
Sbjct: 109 NIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQ------ILEAVA 162
Query: 384 YLH-NGHSSVHIIHCDLKPTNILLDE---NMVAHVSDFGIYKLLGEGEDSVRQTMTMATI 439
YLH NG I+H DLKP N+L + ++DFG+ K++ E V T
Sbjct: 163 YLHENG-----IVHRDLKPENLLYATPAPDAPLKIADFGLSKIV---EHQVLMKTVCGTP 214
Query: 440 GYMAPEYGLEGIVSAKCDVYSYGVLL------METFTRKRPTDEMF 479
GY APE + D++S G++ E F +R MF
Sbjct: 215 GYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMF 260
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 95/205 (46%), Gaps = 22/205 (10%)
Query: 272 DEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDS----ECEVLRNVRH 327
++++ +G ++G VYK + G A+K ++LE+ S E +L+ ++H
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALK--KIRLEKEDEGIPSTTIREISILKELKH 59
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
N++K+ LV E + + L+K LD+ E + S L L N
Sbjct: 60 SNIVKLYDVIHTKKRLVLVFEHL-DQDLKK-------LLDVCEGGLESVTAKSFLLQLLN 111
Query: 388 GHSSVH---IIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQ-TMTMATIGYMA 443
G + H ++H DLKP N+L++ ++DFG+ + G VR+ T + T+ Y A
Sbjct: 112 GIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFG---IPVRKYTHEVVTLWYRA 168
Query: 444 PEYGL-EGIVSAKCDVYSYGVLLME 467
P+ + S D++S G + E
Sbjct: 169 PDVLMGSKKYSTTIDIWSVGCIFAE 193
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 95/205 (46%), Gaps = 22/205 (10%)
Query: 272 DEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDS----ECEVLRNVRH 327
++++ +G ++G VYK + G A+K ++LE+ S E +L+ ++H
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALK--KIRLEKEDEGIPSTTIREISILKELKH 59
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
N++K+ LV E + + L+K LD+ E + S L L N
Sbjct: 60 SNIVKLYDVIHTKKRLVLVFEHL-DQDLKK-------LLDVCEGGLESVTAKSFLLQLLN 111
Query: 388 GHSSVH---IIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQ-TMTMATIGYMA 443
G + H ++H DLKP N+L++ ++DFG+ + G VR+ T + T+ Y A
Sbjct: 112 GIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFG---IPVRKYTHEVVTLWYRA 168
Query: 444 PEYGL-EGIVSAKCDVYSYGVLLME 467
P+ + S D++S G + E
Sbjct: 169 PDVLMGSKKYSTTIDIWSVGCIFAE 193
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 102/228 (44%), Gaps = 39/228 (17%)
Query: 261 RTSYLDIQRATDEFNECNLLGTSSFGSVYKGTI---------------SDGTDVAIKVFN 305
+ YLD + T E E LG+ +FG+V KG ++ D A+K
Sbjct: 3 KEVYLDRKLLTLEDKE---LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK--- 56
Query: 306 LQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYF 365
+E V++ + + +++++ + LV+E G L K+L + +
Sbjct: 57 -------DELLAEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHV 108
Query: 366 LD--ILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLL 423
D I+E ++ V ++YL + +H DL N+LL A +SDFG+ K L
Sbjct: 109 KDKNIIE---LVHQVSMGMKYLEESN----FVHRDLAARNVLLVTQHYAKISDFGLSKAL 161
Query: 424 GEGEDSVR-QTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
E+ + QT + + APE S+K DV+S+GVL+ E F+
Sbjct: 162 RADENXYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 94/203 (46%), Gaps = 13/203 (6%)
Query: 269 RATDEFNECNLLGTSSFGSVYKGTISDGT-DVAIKVFNLQL--ERAFRSFDSECEVLRNV 325
R TD++ LG +F V + T + A K+ N + R + + E + R +
Sbjct: 28 RFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLL 87
Query: 326 RHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYL 385
+H N++++ S S F LV + + G L + + + Y+ + + + + + ++ ++
Sbjct: 88 KHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEA-DASHCIHQILESVNHI 146
Query: 386 HNGHSSVHIIHCDLKPTNILLD---ENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYM 442
H I+H DLKP N+LL + ++DFG+ + +GE T GY+
Sbjct: 147 HQH----DIVHRDLKPENLLLASKCKGAAVKLADFGL-AIEVQGEQQAWFGFA-GTPGYL 200
Query: 443 APEYGLEGIVSAKCDVYSYGVLL 465
+PE + D+++ GV+L
Sbjct: 201 SPEVLRKDPYGKPVDIWACGVIL 223
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 93/215 (43%), Gaps = 20/215 (9%)
Query: 280 LGTSSFGSVYKGT-ISDGTDVAIKVFNL------QLERAFRSFDSECEVLRNVRHRNLIK 332
+G +F V I G +VA+++ + L++ FR E +++ + H N++K
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR----EVRIMKVLNHPNIVK 77
Query: 333 ILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSV 392
+ LV+E+ G + +L +H + R + SA++Y H
Sbjct: 78 LFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF--- 133
Query: 393 HIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPE-YGLEGI 451
I+H DLK N+LLD +M ++DFG G + + Y APE + +
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN---KLDTFCGSPPYAAPELFQGKKY 189
Query: 452 VSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLR 486
+ DV+S GV+L + P D + E+ R
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRER 224
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 269 RATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLERAFRSFDSECEVLRNV-- 325
R T EF+E +G+ FGSV+K DG AIK L + ++ EV +
Sbjct: 8 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 67
Query: 326 -RHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNY----FLDILERLNIMIDVGS 380
+H ++++ S+++ D + E+ GSL + S NY + E ++++ VG
Sbjct: 68 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI-SENYRIMSYFKEAELKDLLLQVGR 126
Query: 381 ALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVS 415
L Y+H S+ ++H D+KP+NI + + + +
Sbjct: 127 GLRYIH----SMSLVHMDIKPSNIFISRTSIPNAA 157
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 105/226 (46%), Gaps = 32/226 (14%)
Query: 273 EFNECNL-----LGTSSFGSVYKGT-ISDGTDVAIKVFNLQLERAFRSFD------SECE 320
EF NL LG +FG V + T G + A+ +++ ++ D SE +
Sbjct: 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 101
Query: 321 VLRNV-RHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWL---------YSHNYFLDILE 370
++ ++ +H N++ +L + ++ ++ E+ G L +L YS+N + E
Sbjct: 102 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEE 161
Query: 371 RL------NIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424
+L + V + +L +S + IH D+ N+LL VA + DFG+ + +
Sbjct: 162 QLSSRDLLHFSSQVAQGMAFL----ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIM 217
Query: 425 EGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
+ + + + +MAPE + + + + DV+SYG+LL E F+
Sbjct: 218 NDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 90/201 (44%), Gaps = 11/201 (5%)
Query: 284 SFGSVYKGTISDGTDVAI-KVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDF 342
FG VYK + + +A KV + + E + E ++L + H N++K+L ++ +
Sbjct: 22 DFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENN 81
Query: 343 KALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPT 402
+++EF G+++ + L + + AL YLH+ IIH DLK
Sbjct: 82 LWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN----KIIHRDLKAG 137
Query: 403 NILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGL-----EGIVSAKCD 457
NIL + ++DFG+ R + + T +MAPE + + K D
Sbjct: 138 NILFTLDGDIKLADFGVSAKNTRTXIQRRDSF-IGTPYWMAPEVVMCETSKDRPYDYKAD 196
Query: 458 VYSYGVLLMETFTRKRPTDEM 478
V+S G+ L+E + P E+
Sbjct: 197 VWSLGITLIEMAEIEPPHHEL 217
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 269 RATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLERAFRSFDSECEVLRNV-- 325
R T EF+E +G+ FGSV+K DG AIK L + ++ EV +
Sbjct: 6 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 65
Query: 326 -RHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNY----FLDILERLNIMIDVGS 380
+H ++++ S+++ D + E+ GSL + S NY + E ++++ VG
Sbjct: 66 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI-SENYRIMSYFKEAELKDLLLQVGR 124
Query: 381 ALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVS 415
L Y+H S+ ++H D+KP+NI + + + +
Sbjct: 125 GLRYIH----SMSLVHMDIKPSNIFISRTSIPNAA 155
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 102/220 (46%), Gaps = 26/220 (11%)
Query: 273 EFNECNL-----LGTSSFGSVYKGT-ISDGTDVAIKVFNLQLERAFRSFD------SECE 320
EF NL LG +FG V + T G + A+ +++ ++ D SE +
Sbjct: 34 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 93
Query: 321 VLRNV-RHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYF---------LDILE 370
++ ++ +H N++ +L + ++ ++ E+ G L +L L++ +
Sbjct: 94 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRD 153
Query: 371 RLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSV 430
L+ V + +L +S + IH D+ N+LL VA + DFG+ + + + +
Sbjct: 154 LLHFSSQVAQGMAFL----ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 209
Query: 431 RQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
+ + +MAPE + + + + DV+SYG+LL E F+
Sbjct: 210 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 96/218 (44%), Gaps = 18/218 (8%)
Query: 265 LDIQRATDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRN 324
L I+ ++F +LG SFG V+ T+ + L+ + D EC ++
Sbjct: 10 LQIKLKIEDFILHKMLGKGSFGKVFLAEFK-KTNQFFAIKALKKDVVLMDDDVECTMVEK 68
Query: 325 ------VRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDV 378
H L + ++ + V+E++ G L + S + F D+ ++
Sbjct: 69 RVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKF-DLSRATFYAAEI 127
Query: 379 GSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYK--LLGEGEDSVRQTMTM 436
L++LH S I++ DLK NILLD++ ++DFG+ K +LG+ +
Sbjct: 128 ILGLQFLH----SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDA----KTNXFC 179
Query: 437 ATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRP 474
T Y+APE L + D +S+GVLL E + P
Sbjct: 180 GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 217
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 104/245 (42%), Gaps = 14/245 (5%)
Query: 269 RATDEFNECNLLGTSSFGSVYKGTISDGTDV-AIKVFNLQL---ERAFRSFDSECEVLRN 324
R + LG F Y+ T D +V A KV + +E + ++
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 98
Query: 325 VRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEY 384
+ + +++ + + DF +VLE SL + L+ + E M ++Y
Sbjct: 99 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQGVQY 157
Query: 385 LHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIY-KLLGEGEDSVRQTMTMATIGYMA 443
LHN +IH DLK N+ L+++M + DFG+ K+ +GE R+ T Y+A
Sbjct: 158 LHNNR----VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE---RKKXLCGTPNYIA 210
Query: 444 PEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKE-SLPHGLTEVVD 502
PE + S + D++S G +L K P + + E +R E S+P + V
Sbjct: 211 PEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVAS 270
Query: 503 ANLVR 507
A + R
Sbjct: 271 ALIRR 275
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 109/234 (46%), Gaps = 41/234 (17%)
Query: 270 ATDEFNECNLLGTSSFGSVYKG--TISDGTDVAIKVFNLQLER------AFRSFDSECEV 321
+ D + LG ++G VYK T+++ T VAIK L+ E A R E +
Sbjct: 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNET-VAIKRIRLEHEEEGVPGTAIR----EVSL 86
Query: 322 LRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSA 381
L+ ++HRN+I++ S + L+ E+ N L+K++ + D+ R+ + S
Sbjct: 87 LKELQHRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNP---DVSMRV-----IKSF 137
Query: 382 LEYLHNGHSSVH---IIHCDLKPTNILL-----DENMVAHVSDFGIYKLLGEGEDSVRQ- 432
L L NG + H +H DLKP N+LL E V + DFG+ + G +RQ
Sbjct: 138 LYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFG---IPIRQF 194
Query: 433 TMTMATIGYMAPEYGLEGI-VSAKCDVYS----YGVLLMET--FTRKRPTDEMF 479
T + T+ Y PE L S D++S + +LM+T F D++F
Sbjct: 195 THEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLF 248
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 73/146 (50%), Gaps = 13/146 (8%)
Query: 269 RATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLERAFRSFDSECEVLRNV-- 325
R T EF+E +G+ FGSV+K DG AIK L + ++ EV +
Sbjct: 6 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 65
Query: 326 -RHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNY----FLDILERLNIMIDVGS 380
+H ++++ S+++ D + E+ GSL + S NY + E ++++ VG
Sbjct: 66 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI-SENYRIMSYFKEAELKDLLLQVGR 124
Query: 381 ALEYLHNGHSSVHIIHCDLKPTNILL 406
L Y+H S+ ++H D+KP+NI +
Sbjct: 125 GLRYIH----SMSLVHMDIKPSNIFI 146
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 104/245 (42%), Gaps = 14/245 (5%)
Query: 269 RATDEFNECNLLGTSSFGSVYKGTISDGTDV-AIKVFNLQL---ERAFRSFDSECEVLRN 324
R + LG F Y+ T D +V A KV + +E + ++
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 98
Query: 325 VRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEY 384
+ + +++ + + DF +VLE SL + L+ + E M ++Y
Sbjct: 99 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQGVQY 157
Query: 385 LHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIY-KLLGEGEDSVRQTMTMATIGYMA 443
LHN +IH DLK N+ L+++M + DFG+ K+ +GE R+ T Y+A
Sbjct: 158 LHNNR----VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE---RKKTLCGTPNYIA 210
Query: 444 PEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKE-SLPHGLTEVVD 502
PE + S + D++S G +L K P + + E +R E S+P + V
Sbjct: 211 PEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVAS 270
Query: 503 ANLVR 507
A + R
Sbjct: 271 ALIRR 275
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 92/214 (42%), Gaps = 19/214 (8%)
Query: 262 TSYLDIQRATDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVF-----NLQLERAFRSFD 316
T +IQR E C +G FG V++G + A+ V N + F
Sbjct: 382 TRDYEIQRERIELGRC--IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFL 439
Query: 317 SECEVLRNVRHRNLIKILSSYS-NPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIM 375
E +R H +++K++ + NP + +++E G L +L + LD+ +
Sbjct: 440 QEALTMRQFDHPHIVKLIGVITENPVW--IIMELCTLGELRSFLQVRKFSLDLASLILYA 497
Query: 376 IDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSV--RQT 433
+ +AL YL S +H D+ N+L+ + DFG+ + + EDS + +
Sbjct: 498 YQLSTALAYLE----SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYM---EDSTYYKAS 550
Query: 434 MTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLME 467
I +MAPE ++ DV+ +GV + E
Sbjct: 551 KGKLPIKWMAPESINFRRFTSASDVWMFGVCMWE 584
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 73/146 (50%), Gaps = 13/146 (8%)
Query: 269 RATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLERAFRSFDSECEVLRNV-- 325
R T EF+E +G+ FGSV+K DG AIK L + ++ EV +
Sbjct: 4 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 63
Query: 326 -RHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNY----FLDILERLNIMIDVGS 380
+H ++++ S+++ D + E+ GSL + S NY + E ++++ VG
Sbjct: 64 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI-SENYRIMSYFKEAELKDLLLQVGR 122
Query: 381 ALEYLHNGHSSVHIIHCDLKPTNILL 406
L Y+H S+ ++H D+KP+NI +
Sbjct: 123 GLRYIH----SMSLVHMDIKPSNIFI 144
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 102/228 (44%), Gaps = 39/228 (17%)
Query: 261 RTSYLDIQRATDEFNECNLLGTSSFGSVYKGTI---------------SDGTDVAIKVFN 305
+ YLD + T E E LG+ +FG+V KG ++ D A+K
Sbjct: 3 KEVYLDRKLLTLEDKE---LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK--- 56
Query: 306 LQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYF 365
+E V++ + + +++++ + LV+E G L K+L + +
Sbjct: 57 -------DELLAEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHV 108
Query: 366 LD--ILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLL 423
D I+E ++ V ++YL + +H DL N+LL A +SDFG+ K L
Sbjct: 109 KDKNIIE---LVHQVSMGMKYLEESN----FVHRDLAARNVLLVTQHYAKISDFGLSKAL 161
Query: 424 GEGEDSVR-QTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
E+ + QT + + APE S+K DV+S+GVL+ E F+
Sbjct: 162 RADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 102/220 (46%), Gaps = 26/220 (11%)
Query: 273 EFNECNL-----LGTSSFGSVYKGT-ISDGTDVAIKVFNLQLERAFRSFD------SECE 320
EF NL LG +FG V + T G + A+ +++ ++ D SE +
Sbjct: 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 101
Query: 321 VLRNV-RHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYF---------LDILE 370
++ ++ +H N++ +L + ++ ++ E+ G L +L L++ +
Sbjct: 102 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRD 161
Query: 371 RLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSV 430
L+ V + +L +S + IH D+ N+LL VA + DFG+ + + + +
Sbjct: 162 LLHFSSQVAQGMAFL----ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 217
Query: 431 RQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
+ + +MAPE + + + + DV+SYG+LL E F+
Sbjct: 218 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 106/220 (48%), Gaps = 27/220 (12%)
Query: 271 TDEFNECNLLGTSSFGSVYKGTISD-GTDVAIK---VFNLQLERAFRSFDSECEVLRNVR 326
+ +F +LLG ++G V T G VAIK F+ L A R+ E ++L++ +
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPL-FALRTL-REIKILKHFK 67
Query: 327 HRNLIKILS-----SYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSA 381
H N+I I + S+ N + ++ E M L + + + D ++ + A
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELM-QTDLHRVISTQMLSDDHIQYF--IYQTLRA 124
Query: 382 LEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGE-----GEDSVRQTMT- 435
++ LH + +IH DLKP+N+L++ N V DFG+ +++ E E + +Q+
Sbjct: 125 VKVLHGSN----VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMV 180
Query: 436 --MATIGYMAPEYGL-EGIVSAKCDVYSYGVLLMETFTRK 472
+AT Y APE L S DV+S G +L E F R+
Sbjct: 181 EFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 102/228 (44%), Gaps = 39/228 (17%)
Query: 261 RTSYLDIQRATDEFNECNLLGTSSFGSVYKGTI---------------SDGTDVAIKVFN 305
+ YLD + T E E LG+ +FG+V KG ++ D A+K
Sbjct: 9 KEVYLDRKLLTLEDKE---LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK--- 62
Query: 306 LQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYF 365
+E V++ + + +++++ + LV+E G L K+L + +
Sbjct: 63 -------DELLAEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHV 114
Query: 366 LD--ILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLL 423
D I+E ++ V ++YL + +H DL N+LL A +SDFG+ K L
Sbjct: 115 KDKNIIE---LVHQVSMGMKYLEESN----FVHRDLAARNVLLVTQHYAKISDFGLSKAL 167
Query: 424 GEGEDSVR-QTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
E+ + QT + + APE S+K DV+S+GVL+ E F+
Sbjct: 168 RADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 215
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 93/215 (43%), Gaps = 20/215 (9%)
Query: 280 LGTSSFGSVYKGT-ISDGTDVAIKVFNL------QLERAFRSFDSECEVLRNVRHRNLIK 332
+G +F V I G +VA+++ + L++ FR E +++ + H N++K
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR----EVRIMKVLNHPNIVK 77
Query: 333 ILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSV 392
+ LV+E+ G + +L +H + R + SA++Y H
Sbjct: 78 LFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF--- 133
Query: 393 HIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPE-YGLEGI 451
I+H DLK N+LLD +M ++DFG G + + Y APE + +
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN---KLDEFCGSPPYAAPELFQGKKY 189
Query: 452 VSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLR 486
+ DV+S GV+L + P D + E+ R
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRER 224
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 98/234 (41%), Gaps = 17/234 (7%)
Query: 249 DHEDFLPLAIWRRTSYLDIQ-RATDEFNECNLLGTSSFGSVY----KGTISDGTDVAIKV 303
D + FL W+ +L+ Q D F + +LG FG V+ K T +
Sbjct: 164 DSKYFLRFLQWK---WLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNK 220
Query: 304 FNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYS-- 361
L+ + ++ E ++L V R ++ + ++ LV+ M G + +Y+
Sbjct: 221 KRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVD 280
Query: 362 -HNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIY 420
N + + S LE+LH +II+ DLKP N+LLD++ +SD G+
Sbjct: 281 EDNPGFQEPRAIFYTAQIVSGLEHLHQ----RNIIYRDLKPENVLLDDDGNVRISDLGLA 336
Query: 421 KLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRP 474
L G+ + T G+MAPE L D ++ GV L E + P
Sbjct: 337 VELKAGQTKTKG--YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 101/225 (44%), Gaps = 39/225 (17%)
Query: 264 YLDIQRATDEFNECNLLGTSSFGSVYKGTI---------------SDGTDVAIKVFNLQL 308
YLD + T E E LG+ +FG+V KG ++ D A+K
Sbjct: 2 YLDRKLLTLEDKE---LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK------ 52
Query: 309 ERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLD- 367
+E V++ + + +++++ + LV+E G L K+L + + D
Sbjct: 53 ----DELLAEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK 107
Query: 368 -ILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEG 426
I+E ++ V ++YL + +H DL N+LL A +SDFG+ K L
Sbjct: 108 NIIE---LVHQVSMGMKYLEESN----FVHRDLAARNVLLVTQHYAKISDFGLSKALRAD 160
Query: 427 EDSVR-QTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
E+ + QT + + APE S+K DV+S+GVL+ E F+
Sbjct: 161 ENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 205
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 94/201 (46%), Gaps = 13/201 (6%)
Query: 271 TDEFNECNLLGTSSFGSVYKGT-ISDGTDVAIKVFNLQL--ERAFRSFDSECEVLRNVRH 327
TDE+ +G +F V + + G + A K+ N + R + + E + R ++H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
N++++ S S F LV + + G L + + + Y+ + + + + + A+ + H
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEA-DASHCIQQILEAVLHCHQ 121
Query: 388 GHSSVHIIHCDLKPTNILLD---ENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAP 444
+ ++H DLKP N+LL + ++DFG+ + +G+ T GY++P
Sbjct: 122 ----MGVVHRDLKPENLLLASKCKGAAVKLADFGL-AIEVQGDQQAWFGFA-GTPGYLSP 175
Query: 445 EYGLEGIVSAKCDVYSYGVLL 465
E + D+++ GV+L
Sbjct: 176 EVLRKEAYGKPVDIWACGVIL 196
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 94/187 (50%), Gaps = 27/187 (14%)
Query: 297 TDVAIKVFNLQ----LERAFRSFDSECEVLRNVR-HRNLIKILSSYSNPDFKALVLEFMP 351
+ A+K+ Q R FR E E+L + HRN+++++ + D LV E M
Sbjct: 39 QEYAVKIIEKQPGHIRSRVFR----EVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMR 94
Query: 352 NGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDE-NM 410
GS+ ++ +F + LE ++ DV SAL++LHN I H DLKP NIL + N
Sbjct: 95 GGSILSHIHKRRHFNE-LEASVVVQDVASALDFLHNK----GIAHRDLKPENILCEHPNQ 149
Query: 411 VAHVS--DFGI---YKLLGEGED-SVRQTMT-MATIGYMAPE----YGLEG-IVSAKCDV 458
V+ V DF + KL G+ S + +T + YMAPE + E I +CD+
Sbjct: 150 VSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDL 209
Query: 459 YSYGVLL 465
+S GV+L
Sbjct: 210 WSLGVIL 216
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 94/211 (44%), Gaps = 18/211 (8%)
Query: 270 ATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNL--QLERAFRSFDSECEVLRNVR 326
+ + F + +G ++G VYK G VA+K L + E + E +L+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 327 HRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID-VGSALEYL 385
H N++K+L + LV EF+ + L+ F+D I + + S L L
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKT-------FMDASALTGIPLPLIKSYLFQL 115
Query: 386 HNGHSSVH---IIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYM 442
G + H ++H DLKP N+L++ ++DFG+ + G + + T+ Y
Sbjct: 116 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYR 173
Query: 443 APEYGLE-GIVSAKCDVYSYGVLLMETFTRK 472
APE L S D++S G + E TR+
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 92/211 (43%), Gaps = 18/211 (8%)
Query: 270 ATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNL--QLERAFRSFDSECEVLRNVR 326
+ + F + +G ++G VYK G VA+K L + E + E +L+ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 327 HRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID-VGSALEYL 385
H N++K+L + LV EF+ + F+D I + + S L L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKD--------FMDASALTGIPLPLIKSYLFQL 112
Query: 386 HNGHSSVH---IIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYM 442
G + H ++H DLKP N+L++ ++DFG+ + G + + T+ Y
Sbjct: 113 LQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYR 170
Query: 443 APEYGLE-GIVSAKCDVYSYGVLLMETFTRK 472
APE L S D++S G + E TR+
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 104/245 (42%), Gaps = 14/245 (5%)
Query: 269 RATDEFNECNLLGTSSFGSVYKGTISDGTDV-AIKVFNLQL---ERAFRSFDSECEVLRN 324
R + LG F Y+ T D +V A KV + +E + ++
Sbjct: 23 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 82
Query: 325 VRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEY 384
+ + +++ + + DF +VLE SL + L+ + E M ++Y
Sbjct: 83 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQGVQY 141
Query: 385 LHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIY-KLLGEGEDSVRQTMTMATIGYMA 443
LHN +IH DLK N+ L+++M + DFG+ K+ +GE R+ T Y+A
Sbjct: 142 LHNNR----VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE---RKKDLCGTPNYIA 194
Query: 444 PEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKE-SLPHGLTEVVD 502
PE + S + D++S G +L K P + + E +R E S+P + V
Sbjct: 195 PEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVAS 254
Query: 503 ANLVR 507
A + R
Sbjct: 255 ALIRR 259
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 104/245 (42%), Gaps = 14/245 (5%)
Query: 269 RATDEFNECNLLGTSSFGSVYKGTISDGTDV-AIKVFNLQL---ERAFRSFDSECEVLRN 324
R + LG F Y+ T D +V A KV + +E + ++
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 98
Query: 325 VRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEY 384
+ + +++ + + DF +VLE SL + L+ + E M ++Y
Sbjct: 99 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQGVQY 157
Query: 385 LHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIY-KLLGEGEDSVRQTMTMATIGYMA 443
LHN +IH DLK N+ L+++M + DFG+ K+ +GE R+ T Y+A
Sbjct: 158 LHNNR----VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE---RKKDLCGTPNYIA 210
Query: 444 PEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKE-SLPHGLTEVVD 502
PE + S + D++S G +L K P + + E +R E S+P + V
Sbjct: 211 PEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVAS 270
Query: 503 ANLVR 507
A + R
Sbjct: 271 ALIRR 275
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 117/250 (46%), Gaps = 17/250 (6%)
Query: 236 MYIRCRNRNTKKSDH-EDFLPLAIWRRTSYLDIQRATDEFNECNLLGTSSFGSVYKGTIS 294
+Y C + ++ + +FL A ++Q ++F ++G +FG V +
Sbjct: 53 LYTECSHSALRRDKYVAEFLEWAKPFTQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMK 112
Query: 295 DGTDV-AIKVFNL--QLERAFRS-FDSECEVLRNVRHRNLIKILSSYSNPDFKALVLEFM 350
+ + A+K+ N L+RA + F E +VL N + + + ++ + + LV+++
Sbjct: 113 NTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYY 172
Query: 351 PNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENM 410
G L L + F D L +G + + + H +H +H D+KP N+LLD N
Sbjct: 173 VGGDLLTLL---SKFEDKLPEDMARFYIGEMVLAIDSIHQ-LHYVHRDIKPDNVLLDVNG 228
Query: 411 VAHVSDFG-IYKLLGEGEDSVRQTMTMATIGYMAPE--YGLE---GIVSAKCDVYSYGVL 464
++DFG K+ +G +V+ ++ + T Y++PE +E G +CD +S GV
Sbjct: 229 HIRLADFGSCLKMNDDG--TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVC 286
Query: 465 LMETFTRKRP 474
+ E + P
Sbjct: 287 MYEMLYGETP 296
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 86/180 (47%), Gaps = 20/180 (11%)
Query: 306 LQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKW-----LY 360
+ ++ + F +E +++ ++++ + +N D ++ E+M N S+ K+ +
Sbjct: 81 ISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVL 140
Query: 361 SHNY--FLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFG 418
NY F+ I I+ V ++ Y+HN +I H D+KP+NIL+D+N +SDF
Sbjct: 141 DKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNILMDKNGRVKLSDF- 196
Query: 419 IYKLLGEGEDSVRQTM--TMATIGYMAPEY--GLEGIVSAKCDVYSYGVLLMETFTRKRP 474
GE E V + + + T +M PE+ AK D++S G+ L F P
Sbjct: 197 -----GESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVP 251
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 117/250 (46%), Gaps = 17/250 (6%)
Query: 236 MYIRCRNRNTKKSDH-EDFLPLAIWRRTSYLDIQRATDEFNECNLLGTSSFGSVYKGTIS 294
+Y C + ++ + +FL A ++Q ++F ++G +FG V +
Sbjct: 37 LYTECSHSALRRDKYVAEFLEWAKPFTQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMK 96
Query: 295 DGTDV-AIKVFNL--QLERAFRS-FDSECEVLRNVRHRNLIKILSSYSNPDFKALVLEFM 350
+ + A+K+ N L+RA + F E +VL N + + + ++ + + LV+++
Sbjct: 97 NTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYY 156
Query: 351 PNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENM 410
G L L + F D L +G + + + H +H +H D+KP N+LLD N
Sbjct: 157 VGGDLLTLL---SKFEDKLPEDMARFYIGEMVLAIDSIHQ-LHYVHRDIKPDNVLLDVNG 212
Query: 411 VAHVSDFG-IYKLLGEGEDSVRQTMTMATIGYMAPE--YGLE---GIVSAKCDVYSYGVL 464
++DFG K+ +G +V+ ++ + T Y++PE +E G +CD +S GV
Sbjct: 213 HIRLADFGSCLKMNDDG--TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVC 270
Query: 465 LMETFTRKRP 474
+ E + P
Sbjct: 271 MYEMLYGETP 280
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 96/230 (41%), Gaps = 17/230 (7%)
Query: 253 FLPLAIWRRTSYLDIQ-RATDEFNECNLLGTSSFGSVY----KGTISDGTDVAIKVFNLQ 307
FL W+ +L+ Q D F + +LG FG V+ K T + L+
Sbjct: 168 FLRFLQWK---WLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLK 224
Query: 308 LERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYS---HNY 364
+ ++ E ++L V R ++ + ++ LV+ M G + +Y+ N
Sbjct: 225 KRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNP 284
Query: 365 FLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424
+ + S LE+LH +II+ DLKP N+LLD++ +SD G+ L
Sbjct: 285 GFQEPRAIFYTAQIVSGLEHLHQ----RNIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340
Query: 425 EGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRP 474
G+ + T G+MAPE L D ++ GV L E + P
Sbjct: 341 AGQTKTKG--YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 96/230 (41%), Gaps = 17/230 (7%)
Query: 253 FLPLAIWRRTSYLDIQ-RATDEFNECNLLGTSSFGSVY----KGTISDGTDVAIKVFNLQ 307
FL W+ +L+ Q D F + +LG FG V+ K T + L+
Sbjct: 168 FLRFLQWK---WLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLK 224
Query: 308 LERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYS---HNY 364
+ ++ E ++L V R ++ + ++ LV+ M G + +Y+ N
Sbjct: 225 KRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNP 284
Query: 365 FLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424
+ + S LE+LH +II+ DLKP N+LLD++ +SD G+ L
Sbjct: 285 GFQEPRAIFYTAQIVSGLEHLHQ----RNIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340
Query: 425 EGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRP 474
G+ + T G+MAPE L D ++ GV L E + P
Sbjct: 341 AGQTKTKG--YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 92/211 (43%), Gaps = 18/211 (8%)
Query: 270 ATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNL--QLERAFRSFDSECEVLRNVR 326
+ + F + +G ++G VYK G VA+K L + E + E +L+ +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 327 HRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID-VGSALEYL 385
H N++K+L + LV EF+ + F+D I + + S L L
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLSMDLKD--------FMDASALTGIPLPLIKSYLFQL 114
Query: 386 HNGHSSVH---IIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYM 442
G + H ++H DLKP N+L++ ++DFG+ + G + + T+ Y
Sbjct: 115 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYR 172
Query: 443 APEYGLE-GIVSAKCDVYSYGVLLMETFTRK 472
APE L S D++S G + E TR+
Sbjct: 173 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 98/228 (42%), Gaps = 33/228 (14%)
Query: 267 IQRA-TDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNV 325
+QR + +G +G V+ G G VA+KVF E A S+ E E+ + V
Sbjct: 31 VQRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVF-FTTEEA--SWFRETEIYQTV 86
Query: 326 --RHRNLIKILSSYSNPDFKA--------LVLEFMPNGSLEKWLYSHNYFLDILERLNIM 375
RH N++ +++ D K L+ ++ NGSL +L S LD L +
Sbjct: 87 LMRHENILGFIAA----DIKGTGSWTQLYLITDYHENGSLYDYLKSTT--LDAKSMLKLA 140
Query: 376 IDVGSALEYLHNGHSSVH----IIHCDLKPTNILLDENMVAHVSDFGI-YKLLGE-GEDS 429
S L +LH S I H DLK NIL+ +N ++D G+ K + + E
Sbjct: 141 YSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVD 200
Query: 430 VRQTMTMATIGYMAPEYGLEGIVSAK------CDVYSYGVLLMETFTR 471
+ + T YM PE E + D+YS+G++L E R
Sbjct: 201 IPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARR 248
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 96/230 (41%), Gaps = 17/230 (7%)
Query: 253 FLPLAIWRRTSYLDIQ-RATDEFNECNLLGTSSFGSVY----KGTISDGTDVAIKVFNLQ 307
FL W+ +L+ Q D F + +LG FG V+ K T + L+
Sbjct: 168 FLRFLQWK---WLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLK 224
Query: 308 LERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYS---HNY 364
+ ++ E ++L V R ++ + ++ LV+ M G + +Y+ N
Sbjct: 225 KRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNP 284
Query: 365 FLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424
+ + S LE+LH +II+ DLKP N+LLD++ +SD G+ L
Sbjct: 285 GFQEPRAIFYTAQIVSGLEHLHQ----RNIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340
Query: 425 EGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRP 474
G+ + T G+MAPE L D ++ GV L E + P
Sbjct: 341 AGQTKTKG--YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 92/211 (43%), Gaps = 18/211 (8%)
Query: 270 ATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNL--QLERAFRSFDSECEVLRNVR 326
+ + F + +G ++G VYK G VA+K L + E + E +L+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 327 HRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID-VGSALEYL 385
H N++K+L + LV EF+ + F+D I + + S L L
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLSMDLKD--------FMDASALTGIPLPLIKSYLFQL 115
Query: 386 HNGHSSVH---IIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYM 442
G + H ++H DLKP N+L++ ++DFG+ + G + + T+ Y
Sbjct: 116 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYR 173
Query: 443 APEYGLE-GIVSAKCDVYSYGVLLMETFTRK 472
APE L S D++S G + E TR+
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 94/211 (44%), Gaps = 18/211 (8%)
Query: 270 ATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNL--QLERAFRSFDSECEVLRNVR 326
+ + F + +G ++G VYK G VA+K L + E + E +L+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 327 HRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID-VGSALEYL 385
H N++K+L + LV E + + L+K F+D I + + S L L
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEHV-DQDLKK-------FMDASALTGIPLPLIKSYLFQL 115
Query: 386 HNGHSSVH---IIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYM 442
G + H ++H DLKP N+L++ ++DFG+ + G + + T+ Y
Sbjct: 116 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYR 173
Query: 443 APEYGLE-GIVSAKCDVYSYGVLLMETFTRK 472
APE L S D++S G + E TR+
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 94/209 (44%), Gaps = 36/209 (17%)
Query: 280 LGTSSFGSVYKGTI---------------SDGTDVAIKVFNLQLERAFRSFDSECEVLRN 324
LG+ +FG+V KG ++ D A+K +E V++
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK----------DELLAEANVMQQ 62
Query: 325 VRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLD--ILERLNIMIDVGSAL 382
+ + +++++ + LV+E G L K+L + + D I+E ++ V +
Sbjct: 63 LDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIE---LVHQVSMGM 118
Query: 383 EYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVR-QTMTMATIGY 441
+YL + +H DL N+LL A +SDFG+ K L E+ + QT + +
Sbjct: 119 KYLEESN----FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKW 174
Query: 442 MAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
APE S+K DV+S+GVL+ E F+
Sbjct: 175 YAPECINYYKFSSKSDVWSFGVLMWEAFS 203
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 74/151 (49%), Gaps = 10/151 (6%)
Query: 327 HRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLH 386
H N++K+ + + LV+E + G L + + +F + E IM + SA+ ++H
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSET-EASYIMRKLVSAVSHMH 123
Query: 387 NGHSSVHIIHCDLKPTNILL---DENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMA 443
+ V ++H DLKP N+L ++N+ + DFG +L + D+ T+ Y A
Sbjct: 124 D----VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARL--KPPDNQPLKTPCFTLHYAA 177
Query: 444 PEYGLEGIVSAKCDVYSYGVLLMETFTRKRP 474
PE + CD++S GV+L + + P
Sbjct: 178 PELLNQNGYDESCDLWSLGVILYTMLSGQVP 208
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 106/236 (44%), Gaps = 15/236 (6%)
Query: 279 LLGTSSFGSVYKGTISDGTDV-AIKVFNLQL---ERAFRSFDSECEVLRNVRHRNLIKIL 334
LG F ++ + +D +V A K+ L E + R++ H++++
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 105
Query: 335 SSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHI 394
+ + DF +VLE SL + L+ L E + + +YLH +
Sbjct: 106 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR----V 160
Query: 395 IHCDLKPTNILLDENMVAHVSDFGIY-KLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVS 453
IH DLK N+ L+E++ + DFG+ K+ +GE R+ + T Y+APE + S
Sbjct: 161 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE---RKKVLCGTPNYIAPEVLSKKGHS 217
Query: 454 AKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKE-SLPHGLTEVVDANLVRE 508
+ DV+S G ++ K P + + E LR E S+P + V A+L+++
Sbjct: 218 FEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVA-ASLIQK 272
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 106/236 (44%), Gaps = 15/236 (6%)
Query: 279 LLGTSSFGSVYKGTISDGTDV-AIKVFNLQL---ERAFRSFDSECEVLRNVRHRNLIKIL 334
LG F ++ + +D +V A K+ L E + R++ H++++
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 107
Query: 335 SSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHI 394
+ + DF +VLE SL + L+ L E + + +YLH +
Sbjct: 108 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR----V 162
Query: 395 IHCDLKPTNILLDENMVAHVSDFGIY-KLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVS 453
IH DLK N+ L+E++ + DFG+ K+ +GE R+ + T Y+APE + S
Sbjct: 163 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE---RKKVLCGTPNYIAPEVLSKKGHS 219
Query: 454 AKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKE-SLPHGLTEVVDANLVRE 508
+ DV+S G ++ K P + + E LR E S+P + V A+L+++
Sbjct: 220 FEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVA-ASLIQK 274
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 100/208 (48%), Gaps = 15/208 (7%)
Query: 273 EFNECNLLGTSSFGSVYKGTISDGTD-VAIKVFNLQL--ERAFRSFDSECEVLRNVRHRN 329
++ + +G ++G+V+K + + VA+K L E S E +L+ ++H+N
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 330 LIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGH 389
++++ + LV EF + L+K+ S N LD + + + L + H
Sbjct: 63 IVRLHDVLHSDKKLTLVFEFC-DQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH--- 118
Query: 390 SSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVR-QTMTMATIGYMAPE--Y 446
S +++H DLKP N+L++ N ++DFG+ + G VR + + T+ Y P+ +
Sbjct: 119 -SRNVLHRDLKPQNLLINRNGELKLADFGLARAFGI---PVRCYSAEVVTLWYRPPDVLF 174
Query: 447 GLEGIVSAKCDVYSYGVLLMETFTRKRP 474
G + + S D++S G + E RP
Sbjct: 175 GAK-LYSTSIDMWSAGCIFAELANAARP 201
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 104/256 (40%), Gaps = 22/256 (8%)
Query: 239 RCRNRNTKKSDHEDFLPLAIWRRTSYL---DIQRATDEFNECNLLGTSSFGSVYK-GTIS 294
R R + K D+E L + Y ++ AT + LG SFG V++
Sbjct: 42 RSREPSPKTEDNEGVLLTEKLKPVDYEYREEVHWATHQLR----LGRGSFGEVHRMEDKQ 97
Query: 295 DGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGS 354
G A+K L++ RA C L + R ++ + + + + +E + GS
Sbjct: 98 TGFQCAVKKVRLEVFRAEELM--ACAGLTSPR---IVPLYGAVREGPWVNIFMELLEGGS 152
Query: 355 LEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLD-ENMVAH 413
L + L L L + LEYLH S I+H D+K N+LL + A
Sbjct: 153 LGQ-LVKEQGCLPEDRALYYLGQALEGLEYLH----SRRILHGDVKADNVLLSSDGSHAA 207
Query: 414 VSDFGIYKLL---GEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
+ DFG L G G+D + T +MAPE L AK DV+S +++
Sbjct: 208 LCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLN 267
Query: 471 RKRPTDEMFIGEMSLR 486
P + F G + L+
Sbjct: 268 GCHPWTQFFRGPLCLK 283
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 105/236 (44%), Gaps = 15/236 (6%)
Query: 279 LLGTSSFGSVYKGTISDGTDV-AIKVFNLQL---ERAFRSFDSECEVLRNVRHRNLIKIL 334
LG F ++ + +D +V A K+ L E + R++ H++++
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 335 SSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHI 394
+ + DF +VLE SL + L+ L E + + +YLH +
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR----V 138
Query: 395 IHCDLKPTNILLDENMVAHVSDFGIY-KLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVS 453
IH DLK N+ L+E++ + DFG+ K+ +GE R+ T Y+APE + S
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE---RKKTLCGTPNYIAPEVLSKKGHS 195
Query: 454 AKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKE-SLPHGLTEVVDANLVRE 508
+ DV+S G ++ K P + + E LR E S+P + V A+L+++
Sbjct: 196 FEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVA-ASLIQK 250
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 106/236 (44%), Gaps = 15/236 (6%)
Query: 279 LLGTSSFGSVYKGTISDGTDV-AIKVFNLQL---ERAFRSFDSECEVLRNVRHRNLIKIL 334
LG F ++ + +D +V A K+ L E + R++ H++++
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 81
Query: 335 SSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHI 394
+ + DF +VLE SL + L+ L E + + +YLH +
Sbjct: 82 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR----V 136
Query: 395 IHCDLKPTNILLDENMVAHVSDFGIY-KLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVS 453
IH DLK N+ L+E++ + DFG+ K+ +GE R+ + T Y+APE + S
Sbjct: 137 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE---RKKVLCGTPNYIAPEVLSKKGHS 193
Query: 454 AKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKE-SLPHGLTEVVDANLVRE 508
+ DV+S G ++ K P + + E LR E S+P + V A+L+++
Sbjct: 194 FEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVA-ASLIQK 248
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 105/236 (44%), Gaps = 15/236 (6%)
Query: 279 LLGTSSFGSVYKGTISDGTDV-AIKVFNLQL---ERAFRSFDSECEVLRNVRHRNLIKIL 334
LG F ++ + +D +V A K+ L E + R++ H++++
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 335 SSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHI 394
+ + DF +VLE SL + L+ L E + + +YLH +
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR----V 138
Query: 395 IHCDLKPTNILLDENMVAHVSDFGIY-KLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVS 453
IH DLK N+ L+E++ + DFG+ K+ +GE R+ T Y+APE + S
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE---RKKTLCGTPNYIAPEVLSKKGHS 195
Query: 454 AKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKE-SLPHGLTEVVDANLVRE 508
+ DV+S G ++ K P + + E LR E S+P + V A+L+++
Sbjct: 196 FEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVA-ASLIQK 250
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 94/210 (44%), Gaps = 20/210 (9%)
Query: 272 DEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNL--QLERAFRSFDSECEVLRNVRHR 328
+ F + +G ++G VYK G VA+K L + E + E +L+ + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 329 NLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID-VGSALEYLHN 387
N++K+L + LV E + + L+ F+D I + + S L L
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHV-HQDLKT-------FMDASALTGIPLPLIKSYLFQLLQ 113
Query: 388 GHSSVH---IIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQ-TMTMATIGYMA 443
G + H ++H DLKP N+L++ ++DFG+ + G VR T + T+ Y A
Sbjct: 114 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV---PVRTYTHEVVTLWYRA 170
Query: 444 PEYGLE-GIVSAKCDVYSYGVLLMETFTRK 472
PE L S D++S G + E TR+
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 105/236 (44%), Gaps = 15/236 (6%)
Query: 279 LLGTSSFGSVYKGTISDGTDV-AIKVFNLQL---ERAFRSFDSECEVLRNVRHRNLIKIL 334
LG F ++ + +D +V A K+ L E + R++ H++++
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 87
Query: 335 SSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHI 394
+ + DF +VLE SL + L+ L E + + +YLH +
Sbjct: 88 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR----V 142
Query: 395 IHCDLKPTNILLDENMVAHVSDFGIY-KLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVS 453
IH DLK N+ L+E++ + DFG+ K+ +GE R+ T Y+APE + S
Sbjct: 143 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE---RKKTLCGTPNYIAPEVLSKKGHS 199
Query: 454 AKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKE-SLPHGLTEVVDANLVRE 508
+ DV+S G ++ K P + + E LR E S+P + V A+L+++
Sbjct: 200 FEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVA-ASLIQK 254
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 22/217 (10%)
Query: 271 TDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAF---RSFDSECEVLRNVRH 327
++++ LG ++G V + ++ T+ A+ V + ++RA + E + + + H
Sbjct: 6 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNH 64
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
N++K + + L LE+ G L D +E +I + A + H
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGEL----------FDRIEP-DIGMPEPDAQRFFHQ 113
Query: 388 ---GHSSVH---IIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGY 441
G +H I H D+KP N+LLDE +SDFG+ + T+ Y
Sbjct: 114 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPY 173
Query: 442 MAPEYGLEGIVSAK-CDVYSYGVLLMETFTRKRPTDE 477
+APE A+ DV+S G++L + P D+
Sbjct: 174 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 55/105 (52%), Gaps = 4/105 (3%)
Query: 366 LDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGE 425
L++ + L+ V + +L +S + IH D+ N+LL VA + DFG+ + +
Sbjct: 155 LELRDLLHFSSQVAQGMAFL----ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMN 210
Query: 426 GEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
+ + + + +MAPE + + + + DV+SYG+LL E F+
Sbjct: 211 DSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 22/217 (10%)
Query: 271 TDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAF---RSFDSECEVLRNVRH 327
++++ LG ++G V + ++ T+ A+ V + ++RA + E + + + H
Sbjct: 5 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNH 63
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
N++K + + L LE+ G L D +E +I + A + H
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGEL----------FDRIEP-DIGMPEPDAQRFFHQ 112
Query: 388 ---GHSSVH---IIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGY 441
G +H I H D+KP N+LLDE +SDFG+ + T+ Y
Sbjct: 113 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPY 172
Query: 442 MAPEYGLEGIVSAK-CDVYSYGVLLMETFTRKRPTDE 477
+APE A+ DV+S G++L + P D+
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 90/217 (41%), Gaps = 38/217 (17%)
Query: 272 DEFNECNLLGTSSFGSVYKGTISD-GTDVAIKV-----FNLQLERAFRSFDSECEVLRNV 325
D + C ++G +F V + + G A+K+ F + E + +
Sbjct: 24 DVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 326 RHRNLIKILSSYSNPDFKALVLEFMPNGSL---------EKWLYSH----NYFLDILERL 372
+H +++++L +YS+ +V EFM L ++YS +Y ILE
Sbjct: 84 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILE-- 141
Query: 373 NIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILL---DENMVAHVSDFGIYKLLGEGEDS 429
AL Y H+ +IIH D+KP N+LL + + + DFG+ LGE
Sbjct: 142 --------ALRYCHDN----NIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGES--G 187
Query: 430 VRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLM 466
+ + T +MAPE DV+ GV+L
Sbjct: 188 LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILF 224
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 22/217 (10%)
Query: 271 TDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAF---RSFDSECEVLRNVRH 327
++++ LG ++G V + ++ T+ A+ V + ++RA + E + + + H
Sbjct: 5 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNH 63
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
N++K + + L LE+ G L D +E +I + A + H
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGEL----------FDRIEP-DIGMPEPDAQRFFHQ 112
Query: 388 ---GHSSVH---IIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGY 441
G +H I H D+KP N+LLDE +SDFG+ + T+ Y
Sbjct: 113 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 442 MAPEYGLEGIVSAK-CDVYSYGVLLMETFTRKRPTDE 477
+APE A+ DV+S G++L + P D+
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 69/145 (47%), Gaps = 14/145 (9%)
Query: 367 DILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEG 426
DIL + I + + ALE+LH S + +IH D+KP+N+L++ + DFGI L
Sbjct: 109 DILGK--IAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL--- 160
Query: 427 EDSVRQTMTMATIGYMA-----PEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIG 481
D V + + YMA PE +G S K D++S G+ ++E + P D
Sbjct: 161 VDDVAKDIDAGCKPYMAPERINPELNQKG-YSVKSDIWSLGITMIELAILRFPYDSWGTP 219
Query: 482 EMSLRRWVKESLPHGLTEVVDANLV 506
L++ V+E P + A V
Sbjct: 220 FQQLKQVVEEPSPQLPADKFSAEFV 244
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 110/283 (38%), Gaps = 35/283 (12%)
Query: 272 DEFNECNLLGTSSFGSV----YKGTISDGTDVAIKVFNLQLER---AFRSFDSECEVLRN 324
D + LG+ F V KGT + IK L R + + E +LR
Sbjct: 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 64
Query: 325 VRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEY 384
+RH N+I + + N L+LE + G L +L + E + + + Y
Sbjct: 65 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTED-EATQFLKQILDGVHY 123
Query: 385 LHNGHSSVHIIHCDLKPTNI-LLDENM---VAHVSDFGIYKLLGEGEDSVRQTMTMATIG 440
LH S I H DLKP NI LLD+N+ + DFGI + G + T
Sbjct: 124 LH----SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFGTPE 176
Query: 441 YMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEV 500
++APE + + D++S GV+ + P F+GE LT +
Sbjct: 177 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP----FLGETK---------QETLTNI 223
Query: 501 VDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDA 543
N +E+ FS + DF ++ P R+ + +
Sbjct: 224 SAVNYDFDEEYFSNTSEL---AKDFIRRLLVKDPKRRMTIAQS 263
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 60/147 (40%), Gaps = 39/147 (26%)
Query: 372 LNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVR 431
L+I I + A+E+LH S ++H DLKP+NI + V V DFG+ + + E+
Sbjct: 167 LHIFIQIAEAVEFLH----SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQT 222
Query: 432 QTMTMATIG----------YMAPEYGLEGIVSAKCDVYSYGVLLME-------------- 467
M YM+PE S K D++S G++L E
Sbjct: 223 VLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRI 282
Query: 468 -----------TFTRKRPTDEMFIGEM 483
FT+K P + M + +M
Sbjct: 283 ITDVRNLKFPLLFTQKYPQEHMMVQDM 309
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 103/227 (45%), Gaps = 48/227 (21%)
Query: 267 IQRATDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLERAFRSF------DSEC 319
I + + + +G+ ++GSV G VA+K +L R F+S E
Sbjct: 22 IWEVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 77
Query: 320 EVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEK----WLYSHNYFLDI-----LE 370
+L++++H N+I +L F P SLE+ +L +H D+ +
Sbjct: 78 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 125
Query: 371 RLN------IMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424
+L ++ + L+Y+H S IIH DLKP+N+ ++E+ + DFG+ +
Sbjct: 126 KLTDDHVQFLIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDXELKILDFGLAR--- 178
Query: 425 EGEDSVRQTMTMATIGYMAPEYGLEGI-VSAKCDVYSYGVLLMETFT 470
+D + T +AT Y APE L + + D++S G ++ E T
Sbjct: 179 HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 223
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 101/227 (44%), Gaps = 48/227 (21%)
Query: 267 IQRATDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLERAFRSF------DSEC 319
I + + + +G+ ++GSV G VA+K +L R F+S E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 72
Query: 320 EVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEK----WLYSHNYFLDI-----LE 370
+L++++H N+I +L F P SLE+ +L +H D+ +
Sbjct: 73 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 371 RLN------IMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424
+L ++ + L+Y+H S IIH DLKP+N+ ++E+ + DFG+ +
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 176
Query: 425 EGEDSVRQTMTMATIGYMAPEYGLEGI-VSAKCDVYSYGVLLMETFT 470
+ T +AT Y APE L + + D++S G ++ E T
Sbjct: 177 D-----EMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLT 218
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 101/227 (44%), Gaps = 48/227 (21%)
Query: 267 IQRATDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLERAFRSF------DSEC 319
I + + + +G+ ++GSV G VA+K +L R F+S E
Sbjct: 24 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 79
Query: 320 EVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEK----WLYSHNYFLDI-----LE 370
+L++++H N+I +L F P SLE+ +L +H D+ +
Sbjct: 80 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 127
Query: 371 RLN------IMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424
+L ++ + L+Y+H S IIH DLKP+N+ ++E+ + DFG+ +
Sbjct: 128 KLTDDHVQFLIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTA 183
Query: 425 EGEDSVRQTMTMATIGYMAPEYGLEGI-VSAKCDVYSYGVLLMETFT 470
+ T +AT Y APE L + + D++S G ++ E T
Sbjct: 184 D-----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 225
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 103/227 (45%), Gaps = 48/227 (21%)
Query: 267 IQRATDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLERAFRSF------DSEC 319
I + + + +G+ ++GSV G VA+K +L R F+S E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 72
Query: 320 EVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEK----WLYSHNYFLDI-----LE 370
+L++++H N+I +L F P SLE+ +L +H D+ +
Sbjct: 73 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKXQ 120
Query: 371 RLN------IMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424
+L ++ + L+Y+H S IIH DLKP+N+ ++E+ + DFG+ +
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDXELKILDFGLAR--- 173
Query: 425 EGEDSVRQTMTMATIGYMAPEYGLEGI-VSAKCDVYSYGVLLMETFT 470
+D + T +AT Y APE L + + D++S G ++ E T
Sbjct: 174 HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 101/227 (44%), Gaps = 48/227 (21%)
Query: 267 IQRATDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLERAFRSF------DSEC 319
I + + + +G+ ++GSV G VA+K +L R F+S E
Sbjct: 24 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 79
Query: 320 EVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEK----WLYSHNYFLDI-----LE 370
+L++++H N+I +L F P SLE+ +L +H D+ +
Sbjct: 80 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 127
Query: 371 RLN------IMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424
+L ++ + L+Y+H S IIH DLKP+N+ ++E+ + DFG+ +
Sbjct: 128 KLTDDHVQFLIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTA 183
Query: 425 EGEDSVRQTMTMATIGYMAPEYGLEGI-VSAKCDVYSYGVLLMETFT 470
+ T +AT Y APE L + + D++S G ++ E T
Sbjct: 184 D-----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 225
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 101/227 (44%), Gaps = 48/227 (21%)
Query: 267 IQRATDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLERAFRSF------DSEC 319
I + + + +G+ ++GSV G VA+K +L R F+S E
Sbjct: 24 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 79
Query: 320 EVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEK----WLYSHNYFLDI-----LE 370
+L++++H N+I +L F P SLE+ +L +H D+ +
Sbjct: 80 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 127
Query: 371 RLN------IMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424
+L ++ + L+Y+H S IIH DLKP+N+ ++E+ + DFG+ +
Sbjct: 128 KLTDDHVQFLIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTA 183
Query: 425 EGEDSVRQTMTMATIGYMAPEYGLEGI-VSAKCDVYSYGVLLMETFT 470
+ T +AT Y APE L + + D++S G ++ E T
Sbjct: 184 D-----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 225
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 95/223 (42%), Gaps = 33/223 (14%)
Query: 269 RATDEFNECNLLGTSSFGSVYKGT--ISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVR 326
RA ++ +G ++G V+K + G VA+K +Q E L +R
Sbjct: 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQT-------GEEGMPLSTIR 60
Query: 327 HRNLIKILSSYSNPD----FKALVLEFMPNGSLEKWLYSH-----NYFLDILER------ 371
+++ L ++ +P+ F + + ++ H +LD +
Sbjct: 61 EVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTE 120
Query: 372 --LNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDS 429
++M + L++LH S ++H DLKP NIL+ + ++DFG+ ++
Sbjct: 121 TIKDMMFQLLRGLDFLH----SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSF---Q 173
Query: 430 VRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRK 472
+ T + T+ Y APE L+ + D++S G + E F RK
Sbjct: 174 MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 103/227 (45%), Gaps = 48/227 (21%)
Query: 267 IQRATDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLERAFRSF------DSEC 319
I + + + +G+ ++GSV G VA+K +L R F+S E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 72
Query: 320 EVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEK----WLYSHNYFLDI-----LE 370
+L++++H N+I +L F P SLE+ +L +H D+ +
Sbjct: 73 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 371 RLN------IMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424
+L ++ + L+Y+H S IIH DLKP+N+ ++E+ + DFG+ +
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 173
Query: 425 EGEDSVRQTMTMATIGYMAPEYGLEGI-VSAKCDVYSYGVLLMETFT 470
+D + T +AT Y APE L + + D++S G ++ E T
Sbjct: 174 HTDDEM--TGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 89/215 (41%), Gaps = 20/215 (9%)
Query: 280 LGTSSFGSVYKGT-ISDGTDVAIKVFNL------QLERAFRSFDSECEVLRNVRHRNLIK 332
+G +F V I G +VA+K+ + L++ FR E + + + H N++K
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR----EVRIXKVLNHPNIVK 77
Query: 333 ILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSV 392
+ LV E+ G + +L +H + R + SA++Y H
Sbjct: 78 LFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFR-QIVSAVQYCHQKF--- 133
Query: 393 HIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPE-YGLEGI 451
I+H DLK N+LLD + ++DFG G + Y APE + +
Sbjct: 134 -IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGN---KLDAFCGAPPYAAPELFQGKKY 189
Query: 452 VSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLR 486
+ DV+S GV+L + P D + E+ R
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRER 224
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 95/223 (42%), Gaps = 33/223 (14%)
Query: 269 RATDEFNECNLLGTSSFGSVYKGT--ISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVR 326
RA ++ +G ++G V+K + G VA+K +Q E L +R
Sbjct: 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQT-------GEEGMPLSTIR 60
Query: 327 HRNLIKILSSYSNPD----FKALVLEFMPNGSLEKWLYSH-----NYFLDILER------ 371
+++ L ++ +P+ F + + ++ H +LD +
Sbjct: 61 EVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTE 120
Query: 372 --LNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDS 429
++M + L++LH S ++H DLKP NIL+ + ++DFG+ ++
Sbjct: 121 TIKDMMFQLLRGLDFLH----SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSF---Q 173
Query: 430 VRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRK 472
+ T + T+ Y APE L+ + D++S G + E F RK
Sbjct: 174 MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 95/223 (42%), Gaps = 33/223 (14%)
Query: 269 RATDEFNECNLLGTSSFGSVYKGT--ISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVR 326
RA ++ +G ++G V+K + G VA+K +Q E L +R
Sbjct: 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQT-------GEEGMPLSTIR 60
Query: 327 HRNLIKILSSYSNPD----FKALVLEFMPNGSLEKWLYSH-----NYFLDILER------ 371
+++ L ++ +P+ F + + ++ H +LD +
Sbjct: 61 EVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTE 120
Query: 372 --LNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDS 429
++M + L++LH S ++H DLKP NIL+ + ++DFG+ ++
Sbjct: 121 TIKDMMFQLLRGLDFLH----SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSF---Q 173
Query: 430 VRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRK 472
+ T + T+ Y APE L+ + D++S G + E F RK
Sbjct: 174 MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 102/228 (44%), Gaps = 25/228 (10%)
Query: 318 ECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID 377
E +L RHRN++ + S+ + + ++ EF+ + + + + + L+ E ++ +
Sbjct: 51 EISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQ 110
Query: 378 VGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVS--DFGIYKLLGEGEDSVRQTMT 435
V AL++LH S +I H D++P NI+ + + +FG + L G D+ R T
Sbjct: 111 VCEALQFLH----SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG-DNFRLLFT 165
Query: 436 MATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPH 495
Y APE +VS D++S G L+ + P ++ E+
Sbjct: 166 APE--YYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINP-------------FLAETNQQ 210
Query: 496 GLTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDA 543
+ +++A +E+AF + + MDF ++ R+ ++A
Sbjct: 211 IIENIMNAEYTFDEEAFK---EISIEAMDFVDRLLVKERKSRMTASEA 255
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 103/227 (45%), Gaps = 48/227 (21%)
Query: 267 IQRATDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLERAFRSF------DSEC 319
I + + + +G+ ++GSV G VA+K +L R F+S E
Sbjct: 22 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 77
Query: 320 EVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEK----WLYSHNYFLDI-----LE 370
+L++++H N+I +L F P SLE+ +L +H D+ +
Sbjct: 78 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 125
Query: 371 RLN------IMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424
+L ++ + L+Y+H S IIH DLKP+N+ ++E+ + DFG+ +
Sbjct: 126 KLTDDHVQFLIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDXELKILDFGLAR--- 178
Query: 425 EGEDSVRQTMTMATIGYMAPEYGLEGI-VSAKCDVYSYGVLLMETFT 470
+D + T +AT Y APE L + + D++S G ++ E T
Sbjct: 179 HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 223
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 103/227 (45%), Gaps = 48/227 (21%)
Query: 267 IQRATDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLERAFRSF------DSEC 319
I + + + +G+ ++GSV G VA+K +L R F+S E
Sbjct: 28 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 83
Query: 320 EVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEK----WLYSHNYFLDI-----LE 370
+L++++H N+I +L F P SLE+ +L +H D+ +
Sbjct: 84 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 131
Query: 371 RLN------IMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424
+L ++ + L+Y+H S IIH DLKP+N+ ++E+ + DFG+ +
Sbjct: 132 KLTDDHVQFLIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDXELKILDFGLAR--- 184
Query: 425 EGEDSVRQTMTMATIGYMAPEYGLEGI-VSAKCDVYSYGVLLMETFT 470
+D + T +AT Y APE L + + D++S G ++ E T
Sbjct: 185 HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 229
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 22/217 (10%)
Query: 271 TDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAF---RSFDSECEVLRNVRH 327
++++ LG ++G V + ++ T+ A+ V + ++RA + E + + + H
Sbjct: 5 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
N++K + + L LE+ G L D +E +I + A + H
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGEL----------FDRIEP-DIGMPEPDAQRFFHQ 112
Query: 388 ---GHSSVH---IIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGY 441
G +H I H D+KP N+LLDE +SDFG+ + T+ Y
Sbjct: 113 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPY 172
Query: 442 MAPEYGLEGIVSAK-CDVYSYGVLLMETFTRKRPTDE 477
+APE A+ DV+S G++L + P D+
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 128/331 (38%), Gaps = 53/331 (16%)
Query: 272 DEFNECNLLGTSSFGSVYK-GTISDGTDVAIKVFNLQLERAFR------SFDSECEVLRN 324
D ++ LG+ F V K S G A K + ++ R + E +L+
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 325 VRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEY 384
++H N+I + Y N L+LE + G L +L + L E + + + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYY 129
Query: 385 LHNGHSSVHIIHCDLKPTNI-LLDENMVA---HVSDFGIYKLLGEGEDSVRQTMTMATIG 440
LH S+ I H DLKP NI LLD N+ + DFG+ + G + T
Sbjct: 130 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPA 182
Query: 441 YMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEV 500
++APE + + D++S GV+ + P F+G+ L V
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP----FLGDTK---------QETLANV 229
Query: 501 VDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAA----KLKKIKVKFLD 556
N E++ FS + DF ++ P R+ + D+ K K +
Sbjct: 230 SAVNYEFEDEYFS---NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSR 286
Query: 557 DAAATN------------WRNFHCVSLLTLC 575
A+A N W+ V L++LC
Sbjct: 287 KASAVNMEKFKKFAARKKWK--QSVRLISLC 315
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 102/227 (44%), Gaps = 48/227 (21%)
Query: 267 IQRATDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLERAFRSF------DSEC 319
I + + + +G+ ++GSV + G +A+K +L R F+S E
Sbjct: 46 IWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVK----KLSRPFQSIIHAKRTYREL 101
Query: 320 EVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEK----WLYSHNYFLDI-----LE 370
+L++++H N+I +L F P SLE+ +L +H D+ +
Sbjct: 102 RLLKHMKHENVIGLLDV------------FTPATSLEEFNDVYLVTHLMGADLNNIVKCQ 149
Query: 371 RLN------IMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424
+L ++ + L+Y+H S IIH DLKP+N+ ++E+ + DFG+ +
Sbjct: 150 KLTDDHVQFLIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 205
Query: 425 EGEDSVRQTMTMATIGYMAPEYGLEGI-VSAKCDVYSYGVLLMETFT 470
+ T +AT Y APE L + + D++S G ++ E T
Sbjct: 206 D-----EMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLT 247
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 110/283 (38%), Gaps = 35/283 (12%)
Query: 272 DEFNECNLLGTSSFGSV----YKGTISDGTDVAIKVFNLQLER---AFRSFDSECEVLRN 324
D + LG+ F V KGT + IK L R + + E +LR
Sbjct: 26 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILRE 85
Query: 325 VRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEY 384
+RH N+I + + N L+LE + G L +L + E + + + Y
Sbjct: 86 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTED-EATQFLKQILDGVHY 144
Query: 385 LHNGHSSVHIIHCDLKPTNI-LLDENM---VAHVSDFGIYKLLGEGEDSVRQTMTMATIG 440
LH S I H DLKP NI LLD+N+ + DFGI + G + T
Sbjct: 145 LH----SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFGTPE 197
Query: 441 YMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEV 500
++APE + + D++S GV+ + P F+GE LT +
Sbjct: 198 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP----FLGETK---------QETLTNI 244
Query: 501 VDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDA 543
N +E+ FS + DF ++ P R+ + +
Sbjct: 245 SAVNYDFDEEYFSNTSEL---AKDFIRRLLVKDPKRRMXIAQS 284
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 110/283 (38%), Gaps = 35/283 (12%)
Query: 272 DEFNECNLLGTSSFGSV----YKGTISDGTDVAIKVFNLQLER---AFRSFDSECEVLRN 324
D + LG+ F V KGT + IK L R + + E +LR
Sbjct: 12 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 71
Query: 325 VRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEY 384
+RH N+I + + N L+LE + G L +L + E + + + Y
Sbjct: 72 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTED-EATQFLKQILDGVHY 130
Query: 385 LHNGHSSVHIIHCDLKPTNI-LLDENM---VAHVSDFGIYKLLGEGEDSVRQTMTMATIG 440
LH S I H DLKP NI LLD+N+ + DFGI + G + T
Sbjct: 131 LH----SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFGTPE 183
Query: 441 YMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEV 500
++APE + + D++S GV+ + P F+GE LT +
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP----FLGETK---------QETLTNI 230
Query: 501 VDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDA 543
N +E+ FS + DF ++ P R+ + +
Sbjct: 231 SAVNYDFDEEYFSNTSEL---AKDFIRRLLVKDPKRRMXIAQS 270
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 103/227 (45%), Gaps = 48/227 (21%)
Query: 267 IQRATDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLERAFRSF------DSEC 319
I + + + +G+ ++GSV G VA+K +L R F+S E
Sbjct: 13 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 68
Query: 320 EVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEK----WLYSHNYFLDI-----LE 370
+L++++H N+I +L F P SLE+ +L +H D+ +
Sbjct: 69 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 116
Query: 371 RLN------IMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424
+L ++ + L+Y+H S IIH DLKP+N+ ++E+ + DFG+ +
Sbjct: 117 KLTDDHVQFLIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 169
Query: 425 EGEDSVRQTMTMATIGYMAPEYGLEGI-VSAKCDVYSYGVLLMETFT 470
+D + T +AT Y APE L + + D++S G ++ E T
Sbjct: 170 HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 214
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 103/227 (45%), Gaps = 48/227 (21%)
Query: 267 IQRATDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLERAFRSF------DSEC 319
I + + + +G+ ++GSV G VA+K +L R F+S E
Sbjct: 15 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 70
Query: 320 EVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEK----WLYSHNYFLDI-----LE 370
+L++++H N+I +L F P SLE+ +L +H D+ +
Sbjct: 71 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 118
Query: 371 RLN------IMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424
+L ++ + L+Y+H S IIH DLKP+N+ ++E+ + DFG+ +
Sbjct: 119 KLTDDHVQFLIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 171
Query: 425 EGEDSVRQTMTMATIGYMAPEYGLEGI-VSAKCDVYSYGVLLMETFT 470
+D + T +AT Y APE L + + D++S G ++ E T
Sbjct: 172 HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 216
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 95/218 (43%), Gaps = 23/218 (10%)
Query: 270 ATDEFNECNLLGTSSFGSVYKGT-ISDGTDVAIK---VFNLQLERAFRSFDSECEV---- 321
AT + +G ++G+VYK G VA+K V N + EV
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 322 -LRNVRHRNLIKIL----SSYSNPDFKA-LVLEFMPNGSLEKWL-YSHNYFLDILERLNI 374
L H N+++++ +S ++ + K LV E + + L +L + L ++
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDL 125
Query: 375 MIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTM 434
M L++LH I+H DLKP NIL+ ++DFG+ ++ + T
Sbjct: 126 MRQFLRGLDFLHANC----IVHRDLKPENILVTSGGTVKLADFGLARIYSY---QMALTP 178
Query: 435 TMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRK 472
+ T+ Y APE L+ + D++S G + E F RK
Sbjct: 179 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 216
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 103/227 (45%), Gaps = 48/227 (21%)
Query: 267 IQRATDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLERAFRSF------DSEC 319
I + + + +G+ ++GSV G VA+K +L R F+S E
Sbjct: 13 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK----KLSRPFQSIIHAKRTYREL 68
Query: 320 EVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEK----WLYSHNYFLDI-----LE 370
+L++++H N+I +L F P SLE+ +L +H D+ +
Sbjct: 69 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 116
Query: 371 RLN------IMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424
+L ++ + L+Y+H S IIH DLKP+N+ ++E+ + DFG+ +
Sbjct: 117 KLTDDHVQFLIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 169
Query: 425 EGEDSVRQTMTMATIGYMAPEYGLEGI-VSAKCDVYSYGVLLMETFT 470
+D + T +AT Y APE L + + D++S G ++ E T
Sbjct: 170 HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 214
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 103/227 (45%), Gaps = 48/227 (21%)
Query: 267 IQRATDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLERAFRSF------DSEC 319
I + + + +G+ ++GSV G VA+K +L R F+S E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 72
Query: 320 EVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEK----WLYSHNYFLDI-----LE 370
+L++++H N+I +L F P SLE+ +L +H D+ +
Sbjct: 73 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 371 RLN------IMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424
+L ++ + L+Y+H S IIH DLKP+N+ ++E+ + DFG+ +
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 173
Query: 425 EGEDSVRQTMTMATIGYMAPEYGLEGI-VSAKCDVYSYGVLLMETFT 470
+D + T +AT Y APE L + + D++S G ++ E T
Sbjct: 174 HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 103/227 (45%), Gaps = 48/227 (21%)
Query: 267 IQRATDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLERAFRSF------DSEC 319
I + + + +G+ ++GSV G VA+K +L R F+S E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 72
Query: 320 EVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEK----WLYSHNYFLDI-----LE 370
+L++++H N+I +L F P SLE+ +L +H D+ +
Sbjct: 73 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKXQ 120
Query: 371 RLN------IMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424
+L ++ + L+Y+H S IIH DLKP+N+ ++E+ + DFG+ +
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 173
Query: 425 EGEDSVRQTMTMATIGYMAPEYGLEGI-VSAKCDVYSYGVLLMETFT 470
+D + T +AT Y APE L + + D++S G ++ E T
Sbjct: 174 HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 101/227 (44%), Gaps = 48/227 (21%)
Query: 267 IQRATDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLERAFRSF------DSEC 319
I + + + +G+ ++GSV G VA+K +L R F+S E
Sbjct: 19 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 74
Query: 320 EVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEK----WLYSHNYFLDI-----LE 370
+L++++H N+I +L F P SLE+ +L +H D+ +
Sbjct: 75 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 122
Query: 371 RLN------IMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424
+L ++ + L+Y+H S IIH DLKP+N+ ++E+ + DFG+ +
Sbjct: 123 KLTDDHVQFLIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 178
Query: 425 EGEDSVRQTMTMATIGYMAPEYGLEGI-VSAKCDVYSYGVLLMETFT 470
+ T +AT Y APE L + + D++S G ++ E T
Sbjct: 179 D-----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 220
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 22/217 (10%)
Query: 271 TDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAF---RSFDSECEVLRNVRH 327
++++ LG ++G V + ++ T+ A+ V + ++RA + E + + + H
Sbjct: 5 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
N++K + + L LE+ G L D +E +I + A + H
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGEL----------FDRIEP-DIGMPEPDAQRFFHQ 112
Query: 388 ---GHSSVH---IIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGY 441
G +H I H D+KP N+LLDE +SDFG+ + T+ Y
Sbjct: 113 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPY 172
Query: 442 MAPEYGLEGIVSAK-CDVYSYGVLLMETFTRKRPTDE 477
+APE A+ DV+S G++L + P D+
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 103/227 (45%), Gaps = 48/227 (21%)
Query: 267 IQRATDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLERAFRSF------DSEC 319
I + + + +G+ ++GSV G VA+K +L R F+S E
Sbjct: 14 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 69
Query: 320 EVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEK----WLYSHNYFLDI-----LE 370
+L++++H N+I +L F P SLE+ +L +H D+ +
Sbjct: 70 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 117
Query: 371 RLN------IMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424
+L ++ + L+Y+H S IIH DLKP+N+ ++E+ + DFG+ +
Sbjct: 118 KLTDDHVQFLIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 170
Query: 425 EGEDSVRQTMTMATIGYMAPEYGLEGI-VSAKCDVYSYGVLLMETFT 470
+D + T +AT Y APE L + + D++S G ++ E T
Sbjct: 171 HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 215
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 103/227 (45%), Gaps = 48/227 (21%)
Query: 267 IQRATDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLERAFRSF------DSEC 319
I + + + +G+ ++GSV G VA+K +L R F+S E
Sbjct: 14 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 69
Query: 320 EVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEK----WLYSHNYFLDI-----LE 370
+L++++H N+I +L F P SLE+ +L +H D+ +
Sbjct: 70 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 117
Query: 371 RLN------IMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424
+L ++ + L+Y+H S IIH DLKP+N+ ++E+ + DFG+ +
Sbjct: 118 KLTDDHVQFLIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 170
Query: 425 EGEDSVRQTMTMATIGYMAPEYGLEGI-VSAKCDVYSYGVLLMETFT 470
+D + T +AT Y APE L + + D++S G ++ E T
Sbjct: 171 HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 215
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 121/303 (39%), Gaps = 36/303 (11%)
Query: 272 DEFNECNLLGTSSFGSVYK-GTISDGTDVAIKVFNLQLERAFR------SFDSECEVLRN 324
D ++ LG+ F V K S G A K + ++ R + E +L+
Sbjct: 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 69
Query: 325 VRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEY 384
++H N+I + Y N L+LE + G L +L + L E + + + + Y
Sbjct: 70 IQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYY 128
Query: 385 LHNGHSSVHIIHCDLKPTNI-LLDENMVA---HVSDFGIYKLLGEGEDSVRQTMTMATIG 440
LH S+ I H DLKP NI LLD N+ + DFG+ + G + T
Sbjct: 129 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPE 181
Query: 441 YMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEV 500
++APE + + D++S GV+ + P F+G+ L V
Sbjct: 182 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP----FLGDTK---------QETLANV 228
Query: 501 VDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVKFLDDAAA 560
N E++ FS + DF ++ P R+ + D + + IK K A +
Sbjct: 229 SAVNYEFEDEYFS---NTSALAKDFIRRLLVKDPKKRMTIQD-SLQHPWIKPKDTQQALS 284
Query: 561 TNW 563
+ W
Sbjct: 285 SAW 287
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 103/227 (45%), Gaps = 48/227 (21%)
Query: 267 IQRATDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLERAFRSF------DSEC 319
I + + + +G+ ++GSV G VA+K +L R F+S E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 72
Query: 320 EVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEK----WLYSHNYFLDI-----LE 370
+L++++H N+I +L F P SLE+ +L +H D+ +
Sbjct: 73 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 371 RLN------IMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424
+L ++ + L+Y+H S IIH DLKP+N+ ++E+ + DFG+ +
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 173
Query: 425 EGEDSVRQTMTMATIGYMAPEYGLEGI-VSAKCDVYSYGVLLMETFT 470
+D + T +AT Y APE L + + D++S G ++ E T
Sbjct: 174 HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 101/227 (44%), Gaps = 48/227 (21%)
Query: 267 IQRATDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLERAFRSF------DSEC 319
I + + + +G+ ++GSV G VA+K +L R F+S E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 72
Query: 320 EVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEK----WLYSHNYFLDI-----LE 370
+L++++H N+I +L F P SLE+ +L +H D+ +
Sbjct: 73 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 371 RLN------IMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424
+L ++ + L+Y+H S IIH DLKP+N+ ++E+ + DFG+ +
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 176
Query: 425 EGEDSVRQTMTMATIGYMAPEYGLEGI-VSAKCDVYSYGVLLMETFT 470
+ T +AT Y APE L + + D++S G ++ E T
Sbjct: 177 D-----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 22/217 (10%)
Query: 271 TDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAF---RSFDSECEVLRNVRH 327
++++ LG ++G V + ++ T+ A+ V + ++RA + E + + + H
Sbjct: 5 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
N++K + + L LE+ G L D +E +I + A + H
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGEL----------FDRIEP-DIGMPEPDAQRFFHQ 112
Query: 388 ---GHSSVH---IIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGY 441
G +H I H D+KP N+LLDE +SDFG+ + T+ Y
Sbjct: 113 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPY 172
Query: 442 MAPEYGLEGIVSAK-CDVYSYGVLLMETFTRKRPTDE 477
+APE A+ DV+S G++L + P D+
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 22/217 (10%)
Query: 271 TDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAF---RSFDSECEVLRNVRH 327
++++ LG ++G V + ++ T+ A+ V + ++RA + E + + + H
Sbjct: 5 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
N++K + + L LE+ G L D +E +I + A + H
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGEL----------FDRIEP-DIGMPEPDAQRFFHQ 112
Query: 388 ---GHSSVH---IIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGY 441
G +H I H D+KP N+LLDE +SDFG+ + T+ Y
Sbjct: 113 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 442 MAPEYGLEGIVSAK-CDVYSYGVLLMETFTRKRPTDE 477
+APE A+ DV+S G++L + P D+
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 103/227 (45%), Gaps = 48/227 (21%)
Query: 267 IQRATDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLERAFRSF------DSEC 319
I + + + +G+ ++GSV G VA+K +L R F+S E
Sbjct: 28 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 83
Query: 320 EVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEK----WLYSHNYFLDI-----LE 370
+L++++H N+I +L F P SLE+ +L +H D+ +
Sbjct: 84 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 131
Query: 371 RLN------IMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424
+L ++ + L+Y+H S IIH DLKP+N+ ++E+ + DFG+ +
Sbjct: 132 KLTDDHVQFLIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 184
Query: 425 EGEDSVRQTMTMATIGYMAPEYGLEGI-VSAKCDVYSYGVLLMETFT 470
+D + T +AT Y APE L + + D++S G ++ E T
Sbjct: 185 HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 229
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 92/217 (42%), Gaps = 22/217 (10%)
Query: 271 TDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAF---RSFDSECEVLRNVRH 327
++++ LG ++G V + ++ T+ A+ V + ++RA + E + + + H
Sbjct: 4 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 62
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
N++K + + L LE+ G L D +E +I + A + H
Sbjct: 63 ENVVKFYGHRREGNIQYLFLEYCSGGEL----------FDRIEP-DIGMPEPDAQRFFHQ 111
Query: 388 GHSSV------HIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGY 441
+ V I H D+KP N+LLDE +SDFG+ + T+ Y
Sbjct: 112 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 171
Query: 442 MAPEYGLEGIVSAK-CDVYSYGVLLMETFTRKRPTDE 477
+APE A+ DV+S G++L + P D+
Sbjct: 172 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 208
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 103/227 (45%), Gaps = 48/227 (21%)
Query: 267 IQRATDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLERAFRSF------DSEC 319
I + + + +G+ ++GSV G VA+K +L R F+S E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 72
Query: 320 EVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEK----WLYSHNYFLDI-----LE 370
+L++++H N+I +L F P SLE+ +L +H D+ +
Sbjct: 73 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 371 RLN------IMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424
+L ++ + L+Y+H S IIH DLKP+N+ ++E+ + DFG+ +
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 173
Query: 425 EGEDSVRQTMTMATIGYMAPEYGLEGI-VSAKCDVYSYGVLLMETFT 470
+D + T +AT Y APE L + + D++S G ++ E T
Sbjct: 174 HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 91/226 (40%), Gaps = 57/226 (25%)
Query: 274 FNECNLLGTSSFGSVYKGT-ISDGTDVAIKVFNLQLERAFRSFDSECEVLRNV------- 325
F L+G ++G VYKG + G AIKV ++ + D E E+ + +
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDV-------TGDEEEEIKQEINMLKKYS 78
Query: 326 RHRNLIKILSSY--SNP----DFKALVLEFMPNGSL-------------EKWLYSHNYFL 366
HRN+ ++ NP D LV+EF GS+ E+W+
Sbjct: 79 HHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWI------- 131
Query: 367 DILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEG 426
I ++ L +LH +IH D+K N+LL EN + DFG+ L
Sbjct: 132 -----AYICREILRGLSHLHQHK----VIHRDIKGQNVLLTENAEVKLVDFGVSAQL--D 180
Query: 427 EDSVRQTMTMATIGYMAPEY-----GLEGIVSAKCDVYSYGVLLME 467
R+ + T +MAPE + K D++S G+ +E
Sbjct: 181 RTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIE 226
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 103/227 (45%), Gaps = 48/227 (21%)
Query: 267 IQRATDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLERAFRSF------DSEC 319
I + + + +G+ ++GSV G VA+K +L R F+S E
Sbjct: 40 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 95
Query: 320 EVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEK----WLYSHNYFLDI-----LE 370
+L++++H N+I +L F P SLE+ +L +H D+ +
Sbjct: 96 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 143
Query: 371 RLN------IMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424
+L ++ + L+Y+H S IIH DLKP+N+ ++E+ + DFG+ +
Sbjct: 144 KLTDDHVQFLIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 196
Query: 425 EGEDSVRQTMTMATIGYMAPEYGLEGI-VSAKCDVYSYGVLLMETFT 470
+D + T +AT Y APE L + + D++S G ++ E T
Sbjct: 197 HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 241
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 103/227 (45%), Gaps = 48/227 (21%)
Query: 267 IQRATDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLERAFRSF------DSEC 319
I + + + +G+ ++GSV G VA+K +L R F+S E
Sbjct: 22 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 77
Query: 320 EVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEK----WLYSHNYFLDI-----LE 370
+L++++H N+I +L F P SLE+ +L +H D+ +
Sbjct: 78 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 125
Query: 371 RLN------IMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424
+L ++ + L+Y+H S IIH DLKP+N+ ++E+ + DFG+ +
Sbjct: 126 KLTDDHVQFLIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 178
Query: 425 EGEDSVRQTMTMATIGYMAPEYGLEGI-VSAKCDVYSYGVLLMETFT 470
+D + T +AT Y APE L + + D++S G ++ E T
Sbjct: 179 HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 223
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 103/227 (45%), Gaps = 48/227 (21%)
Query: 267 IQRATDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLERAFRSF------DSEC 319
I + + + +G+ ++GSV G VA+K +L R F+S E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 72
Query: 320 EVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEK----WLYSHNYFLDI-----LE 370
+L++++H N+I +L F P SLE+ +L +H D+ +
Sbjct: 73 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 371 RLN------IMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424
+L ++ + L+Y+H S IIH DLKP+N+ ++E+ + DFG+ +
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 173
Query: 425 EGEDSVRQTMTMATIGYMAPEYGLEGI-VSAKCDVYSYGVLLMETFT 470
+D + T +AT Y APE L + + D++S G ++ E T
Sbjct: 174 HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 103/227 (45%), Gaps = 48/227 (21%)
Query: 267 IQRATDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLERAFRSF------DSEC 319
I + + + +G+ ++GSV G VA+K +L R F+S E
Sbjct: 37 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 92
Query: 320 EVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEK----WLYSHNYFLDI-----LE 370
+L++++H N+I +L F P SLE+ +L +H D+ +
Sbjct: 93 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 140
Query: 371 RLN------IMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424
+L ++ + L+Y+H S IIH DLKP+N+ ++E+ + DFG+ +
Sbjct: 141 KLTDDHVQFLIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 193
Query: 425 EGEDSVRQTMTMATIGYMAPEYGLEGI-VSAKCDVYSYGVLLMETFT 470
+D + T +AT Y APE L + + D++S G ++ E T
Sbjct: 194 HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 238
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 22/217 (10%)
Query: 271 TDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAF---RSFDSECEVLRNVRH 327
++++ LG ++G V + ++ T+ A+ V + ++RA + E + + + H
Sbjct: 5 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
N++K + + L LE+ G L D +E +I + A + H
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGEL----------FDRIEP-DIGMPEPDAQRFFHQ 112
Query: 388 ---GHSSVH---IIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGY 441
G +H I H D+KP N+LLDE +SDFG+ + T+ Y
Sbjct: 113 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 442 MAPEYGLEGIVSAK-CDVYSYGVLLMETFTRKRPTDE 477
+APE A+ DV+S G++L + P D+
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 22/217 (10%)
Query: 271 TDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAF---RSFDSECEVLRNVRH 327
++++ LG ++G V + ++ T+ A+ V + ++RA + E + + + H
Sbjct: 5 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
N++K + + L LE+ G L D +E +I + A + H
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGEL----------FDRIEP-DIGMPEPDAQRFFHQ 112
Query: 388 ---GHSSVH---IIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGY 441
G +H I H D+KP N+LLDE +SDFG+ + T+ Y
Sbjct: 113 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 442 MAPEYGLEGIVSAK-CDVYSYGVLLMETFTRKRPTDE 477
+APE A+ DV+S G++L + P D+
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 100/208 (48%), Gaps = 15/208 (7%)
Query: 273 EFNECNLLGTSSFGSVYKGTISDGTD-VAIKVFNLQL--ERAFRSFDSECEVLRNVRHRN 329
++ + +G ++G+V+K + + VA+K L E S E +L+ ++H+N
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 330 LIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGH 389
++++ + LV EF + L+K+ S N LD + + + L + H
Sbjct: 63 IVRLHDVLHSDKKLTLVFEFC-DQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH--- 118
Query: 390 SSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVR-QTMTMATIGYMAPE--Y 446
S +++H DLKP N+L++ N +++FG+ + G VR + + T+ Y P+ +
Sbjct: 119 -SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGI---PVRCYSAEVVTLWYRPPDVLF 174
Query: 447 GLEGIVSAKCDVYSYGVLLMETFTRKRP 474
G + + S D++S G + E RP
Sbjct: 175 GAK-LYSTSIDMWSAGCIFAELANAGRP 201
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 103/227 (45%), Gaps = 48/227 (21%)
Query: 267 IQRATDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLERAFRSF------DSEC 319
I + + + +G+ ++GSV G VA+K +L R F+S E
Sbjct: 29 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 84
Query: 320 EVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEK----WLYSHNYFLDI-----LE 370
+L++++H N+I +L F P SLE+ +L +H D+ +
Sbjct: 85 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 132
Query: 371 RLN------IMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424
+L ++ + L+Y+H S IIH DLKP+N+ ++E+ + DFG+ +
Sbjct: 133 KLTDDHVQFLIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 185
Query: 425 EGEDSVRQTMTMATIGYMAPEYGLEGI-VSAKCDVYSYGVLLMETFT 470
+D + T +AT Y APE L + + D++S G ++ E T
Sbjct: 186 HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 230
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 22/217 (10%)
Query: 271 TDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAF---RSFDSECEVLRNVRH 327
++++ LG ++G V + ++ T+ A+ V + ++RA + E + + + H
Sbjct: 5 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
N++K + + L LE+ G L D +E +I + A + H
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGEL----------FDRIEP-DIGMPEPDAQRFFHQ 112
Query: 388 ---GHSSVH---IIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGY 441
G +H I H D+KP N+LLDE +SDFG+ + T+ Y
Sbjct: 113 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 442 MAPEYGLEGIVSAK-CDVYSYGVLLMETFTRKRPTDE 477
+APE A+ DV+S G++L + P D+
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 103/227 (45%), Gaps = 48/227 (21%)
Query: 267 IQRATDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLERAFRSF------DSEC 319
I + + + +G+ ++GSV G VA+K +L R F+S E
Sbjct: 29 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 84
Query: 320 EVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEK----WLYSHNYFLDI-----LE 370
+L++++H N+I +L F P SLE+ +L +H D+ +
Sbjct: 85 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 132
Query: 371 RLN------IMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424
+L ++ + L+Y+H S IIH DLKP+N+ ++E+ + DFG+ +
Sbjct: 133 KLTDDHVQFLIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 185
Query: 425 EGEDSVRQTMTMATIGYMAPEYGLEGI-VSAKCDVYSYGVLLMETFT 470
+D + T +AT Y APE L + + D++S G ++ E T
Sbjct: 186 HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 230
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 103/227 (45%), Gaps = 48/227 (21%)
Query: 267 IQRATDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLERAFRSF------DSEC 319
I + + + +G+ ++GSV G VA+K +L R F+S E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 72
Query: 320 EVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEK----WLYSHNYFLDI-----LE 370
+L++++H N+I +L F P SLE+ +L +H D+ +
Sbjct: 73 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 371 RLN------IMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424
+L ++ + L+Y+H S IIH DLKP+N+ ++E+ + DFG+ +
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 173
Query: 425 EGEDSVRQTMTMATIGYMAPEYGLEGI-VSAKCDVYSYGVLLMETFT 470
+D + T +AT Y APE L + + D++S G ++ E T
Sbjct: 174 HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 101/227 (44%), Gaps = 48/227 (21%)
Query: 267 IQRATDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLERAFRSF------DSEC 319
I + + + +G+ ++GSV G VA+K +L R F+S E
Sbjct: 19 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 74
Query: 320 EVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEK----WLYSHNYFLDI-----LE 370
+L++++H N+I +L F P SLE+ +L +H D+ +
Sbjct: 75 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 122
Query: 371 RLN------IMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424
+L ++ + L+Y+H S IIH DLKP+N+ ++E+ + DFG+ +
Sbjct: 123 KLTDDHVQFLIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 178
Query: 425 EGEDSVRQTMTMATIGYMAPEYGLEGI-VSAKCDVYSYGVLLMETFT 470
+ T +AT Y APE L + + D++S G ++ E T
Sbjct: 179 D-----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 220
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 103/227 (45%), Gaps = 48/227 (21%)
Query: 267 IQRATDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLERAFRSF------DSEC 319
I + + + +G+ ++GSV G VA+K +L R F+S E
Sbjct: 24 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 79
Query: 320 EVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEK----WLYSHNYFLDI-----LE 370
+L++++H N+I +L F P SLE+ +L +H D+ +
Sbjct: 80 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 127
Query: 371 RLN------IMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424
+L ++ + L+Y+H S IIH DLKP+N+ ++E+ + DFG+ +
Sbjct: 128 KLTDDHVQFLIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 180
Query: 425 EGEDSVRQTMTMATIGYMAPEYGLEGI-VSAKCDVYSYGVLLMETFT 470
+D + T +AT Y APE L + + D++S G ++ E T
Sbjct: 181 HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 225
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 101/227 (44%), Gaps = 48/227 (21%)
Query: 267 IQRATDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLERAFRSF------DSEC 319
I + + + +G+ ++GSV G VA+K +L R F+S E
Sbjct: 36 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 91
Query: 320 EVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEK----WLYSHNYFLDI-----LE 370
+L++++H N+I +L F P SLE+ +L +H D+ +
Sbjct: 92 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 139
Query: 371 RLN------IMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424
+L ++ + L+Y+H S IIH DLKP+N+ ++E+ + DFG+ +
Sbjct: 140 KLTDDHVQFLIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 195
Query: 425 EGEDSVRQTMTMATIGYMAPEYGLEGI-VSAKCDVYSYGVLLMETFT 470
+ T +AT Y APE L + + D++S G ++ E T
Sbjct: 196 D-----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 237
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 103/227 (45%), Gaps = 48/227 (21%)
Query: 267 IQRATDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLERAFRSF------DSEC 319
I + + + +G+ ++GSV G VA+K +L R F+S E
Sbjct: 22 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 77
Query: 320 EVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEK----WLYSHNYFLDI-----LE 370
+L++++H N+I +L F P SLE+ +L +H D+ +
Sbjct: 78 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 125
Query: 371 RLN------IMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424
+L ++ + L+Y+H S IIH DLKP+N+ ++E+ + DFG+ +
Sbjct: 126 KLTDDHVQFLIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 178
Query: 425 EGEDSVRQTMTMATIGYMAPEYGLEGI-VSAKCDVYSYGVLLMETFT 470
+D + T +AT Y APE L + + D++S G ++ E T
Sbjct: 179 HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 223
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 103/227 (45%), Gaps = 48/227 (21%)
Query: 267 IQRATDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLERAFRSF------DSEC 319
I + + + +G+ ++GSV G VA+K +L R F+S E
Sbjct: 16 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 71
Query: 320 EVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEK----WLYSHNYFLDI-----LE 370
+L++++H N+I +L F P SLE+ +L +H D+ +
Sbjct: 72 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 119
Query: 371 RLN------IMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424
+L ++ + L+Y+H S IIH DLKP+N+ ++E+ + DFG+ +
Sbjct: 120 KLTDDHVQFLIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 172
Query: 425 EGEDSVRQTMTMATIGYMAPEYGLEGI-VSAKCDVYSYGVLLMETFT 470
+D + T +AT Y APE L + + D++S G ++ E T
Sbjct: 173 HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 217
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 103/227 (45%), Gaps = 48/227 (21%)
Query: 267 IQRATDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLERAFRSF------DSEC 319
I + + + +G+ ++GSV G VA+K +L R F+S E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 72
Query: 320 EVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEK----WLYSHNYFLDI-----LE 370
+L++++H N+I +L F P SLE+ +L +H D+ +
Sbjct: 73 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 371 RLN------IMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424
+L ++ + L+Y+H S IIH DLKP+N+ ++E+ + DFG+ +
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 173
Query: 425 EGEDSVRQTMTMATIGYMAPEYGLEGI-VSAKCDVYSYGVLLMETFT 470
+D + T +AT Y APE L + + D++S G ++ E T
Sbjct: 174 HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 92/217 (42%), Gaps = 22/217 (10%)
Query: 271 TDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAF---RSFDSECEVLRNVRH 327
++++ LG ++G V + ++ T+ A+ V + ++RA + E + + + H
Sbjct: 6 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 64
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
N++K + + L LE+ G L D +E +I + A + H
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGEL----------FDRIEP-DIGMPEPDAQRFFHQ 113
Query: 388 GHSSV------HIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGY 441
+ V I H D+KP N+LLDE +SDFG+ + T+ Y
Sbjct: 114 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
Query: 442 MAPEYGLEGIVSAK-CDVYSYGVLLMETFTRKRPTDE 477
+APE A+ DV+S G++L + P D+
Sbjct: 174 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 103/227 (45%), Gaps = 48/227 (21%)
Query: 267 IQRATDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLERAFRSF------DSEC 319
I + + + +G+ ++GSV G VA+K +L R F+S E
Sbjct: 23 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 78
Query: 320 EVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEK----WLYSHNYFLDI-----LE 370
+L++++H N+I +L F P SLE+ +L +H D+ +
Sbjct: 79 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 126
Query: 371 RLN------IMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424
+L ++ + L+Y+H S IIH DLKP+N+ ++E+ + DFG+ +
Sbjct: 127 KLTDDHVQFLIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDSELKILDFGLAR--- 179
Query: 425 EGEDSVRQTMTMATIGYMAPEYGLEGI-VSAKCDVYSYGVLLMETFT 470
+D + T +AT Y APE L + + D++S G ++ E T
Sbjct: 180 HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 224
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 92/217 (42%), Gaps = 22/217 (10%)
Query: 271 TDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAF---RSFDSECEVLRNVRH 327
++++ LG ++G V + ++ T+ A+ V + ++RA + E + + + H
Sbjct: 5 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
N++K + + L LE+ G L D +E +I + A + H
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGEL----------FDRIEP-DIGMPEPDAQRFFHQ 112
Query: 388 GHSSV------HIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGY 441
+ V I H D+KP N+LLDE +SDFG+ + T+ Y
Sbjct: 113 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 442 MAPEYGLEGIVSAK-CDVYSYGVLLMETFTRKRPTDE 477
+APE A+ DV+S G++L + P D+
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 101/227 (44%), Gaps = 48/227 (21%)
Query: 267 IQRATDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLERAFRSF------DSEC 319
I + + + +G+ ++GSV G VA+K +L R F+S E
Sbjct: 19 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 74
Query: 320 EVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEK----WLYSHNYFLDI-----LE 370
+L++++H N+I +L F P SLE+ +L +H D+ +
Sbjct: 75 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 122
Query: 371 RLN------IMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424
+L ++ + L+Y+H S IIH DLKP+N+ ++E+ + DFG+ +
Sbjct: 123 KLTDDHVQFLIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDSELKILDFGLARHTD 178
Query: 425 EGEDSVRQTMTMATIGYMAPEYGLEGI-VSAKCDVYSYGVLLMETFT 470
+ T +AT Y APE L + + D++S G ++ E T
Sbjct: 179 D-----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 220
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 92/217 (42%), Gaps = 22/217 (10%)
Query: 271 TDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAF---RSFDSECEVLRNVRH 327
++++ LG ++G V + ++ T+ A+ V + ++RA + E + + + H
Sbjct: 6 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 64
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
N++K + + L LE+ G L D +E +I + A + H
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGEL----------FDRIEP-DIGMPEPDAQRFFHQ 113
Query: 388 GHSSV------HIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGY 441
+ V I H D+KP N+LLDE +SDFG+ + T+ Y
Sbjct: 114 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
Query: 442 MAPEYGLEGIVSAK-CDVYSYGVLLMETFTRKRPTDE 477
+APE A+ DV+S G++L + P D+
Sbjct: 174 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 101/227 (44%), Gaps = 48/227 (21%)
Query: 267 IQRATDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLERAFRSF------DSEC 319
I + + + +G+ ++GSV G VA+K +L R F+S E
Sbjct: 36 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK----KLSRPFQSIIHAKRTYREL 91
Query: 320 EVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEK----WLYSHNYFLDI-----LE 370
+L++++H N+I +L F P SLE+ +L +H D+ +
Sbjct: 92 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 139
Query: 371 RLN------IMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424
+L ++ + L+Y+H S IIH DLKP+N+ ++E+ + DFG+ +
Sbjct: 140 KLTDDHVQFLIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 195
Query: 425 EGEDSVRQTMTMATIGYMAPEYGLEGI-VSAKCDVYSYGVLLMETFT 470
+ T +AT Y APE L + + D++S G ++ E T
Sbjct: 196 D-----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 237
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 121/303 (39%), Gaps = 36/303 (11%)
Query: 272 DEFNECNLLGTSSFGSVYK-GTISDGTDVAIKVFNLQLERAFR------SFDSECEVLRN 324
D ++ LG+ F V K S G A K + ++ R + E +L+
Sbjct: 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 69
Query: 325 VRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEY 384
++H N+I + Y N L+LE + G L +L + L E + + + + Y
Sbjct: 70 IQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYY 128
Query: 385 LHNGHSSVHIIHCDLKPTNI-LLDENMVA---HVSDFGIYKLLGEGEDSVRQTMTMATIG 440
LH S+ I H DLKP NI LLD N+ + DFG+ + G + T
Sbjct: 129 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPE 181
Query: 441 YMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEV 500
++APE + + D++S GV+ + P F+G+ L V
Sbjct: 182 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP----FLGDTK---------QETLANV 228
Query: 501 VDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVKFLDDAAA 560
N E++ FS + DF ++ P R+ + D + + IK K A +
Sbjct: 229 SAVNYEFEDEYFS---NTSALAKDFIRRLLVKDPKKRMTIQD-SLQHPWIKPKDTQQALS 284
Query: 561 TNW 563
+ W
Sbjct: 285 SAW 287
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 101/227 (44%), Gaps = 48/227 (21%)
Query: 267 IQRATDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLERAFRSF------DSEC 319
I + + + +G+ ++GSV G VA+K +L R F+S E
Sbjct: 37 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK----KLSRPFQSIIHAKRTYREL 92
Query: 320 EVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEK----WLYSHNYFLDI-----LE 370
+L++++H N+I +L F P SLE+ +L +H D+ +
Sbjct: 93 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 140
Query: 371 RLN------IMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424
+L ++ + L+Y+H S IIH DLKP+N+ ++E+ + DFG+ +
Sbjct: 141 KLTDDHVQFLIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 196
Query: 425 EGEDSVRQTMTMATIGYMAPEYGLEGI-VSAKCDVYSYGVLLMETFT 470
+ T +AT Y APE L + + D++S G ++ E T
Sbjct: 197 D-----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 238
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 101/227 (44%), Gaps = 48/227 (21%)
Query: 267 IQRATDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLERAFRSF------DSEC 319
I + + + +G+ ++GSV G VA+K +L R F+S E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK----KLSRPFQSIIHAKRTYREL 72
Query: 320 EVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEK----WLYSHNYFLDI-----LE 370
+L++++H N+I +L F P SLE+ +L +H D+ +
Sbjct: 73 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 371 RLN------IMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424
+L ++ + L+Y+H S IIH DLKP+N+ ++E+ + DFG+ +
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 176
Query: 425 EGEDSVRQTMTMATIGYMAPEYGLEGI-VSAKCDVYSYGVLLMETFT 470
+ T +AT Y APE L + + D++S G ++ E T
Sbjct: 177 D-----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 92/217 (42%), Gaps = 22/217 (10%)
Query: 271 TDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAF---RSFDSECEVLRNVRH 327
++++ LG ++G V + ++ T+ A+ V + ++RA + E + + + H
Sbjct: 6 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 64
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
N++K + + L LE+ G L D +E +I + A + H
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGEL----------FDRIEP-DIGMPEPDAQRFFHQ 113
Query: 388 GHSSV------HIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGY 441
+ V I H D+KP N+LLDE +SDFG+ + T+ Y
Sbjct: 114 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
Query: 442 MAPEYGLEGIVSAK-CDVYSYGVLLMETFTRKRPTDE 477
+APE A+ DV+S G++L + P D+
Sbjct: 174 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 92/217 (42%), Gaps = 22/217 (10%)
Query: 271 TDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAF---RSFDSECEVLRNVRH 327
++++ LG ++G V + ++ T+ A+ V + ++RA + E + + + H
Sbjct: 6 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 64
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
N++K + + L LE+ G L D +E +I + A + H
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGEL----------FDRIEP-DIGMPEPDAQRFFHQ 113
Query: 388 GHSSV------HIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGY 441
+ V I H D+KP N+LLDE +SDFG+ + T+ Y
Sbjct: 114 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
Query: 442 MAPEYGLEGIVSAK-CDVYSYGVLLMETFTRKRPTDE 477
+APE A+ DV+S G++L + P D+
Sbjct: 174 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 121/303 (39%), Gaps = 36/303 (11%)
Query: 272 DEFNECNLLGTSSFGSVYK-GTISDGTDVAIKVFNLQLERAFR------SFDSECEVLRN 324
D ++ LG+ F V K S G A K + ++ R + E +L+
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 325 VRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEY 384
++H N+I + Y N L+LE + G L +L + L E + + + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYY 129
Query: 385 LHNGHSSVHIIHCDLKPTNI-LLDENMVA---HVSDFGIYKLLGEGEDSVRQTMTMATIG 440
LH S+ I H DLKP NI LLD N+ + DFG+ + G + T
Sbjct: 130 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPE 182
Query: 441 YMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEV 500
++APE + + D++S GV+ + P F+G+ L V
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP----FLGDTK---------QETLANV 229
Query: 501 VDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVKFLDDAAA 560
N E++ FS + DF ++ P R+ + D + + IK K A +
Sbjct: 230 SAVNYEFEDEYFS---NTSALAKDFIRRLLVKDPKKRMTIQD-SLQHPWIKPKDTQQALS 285
Query: 561 TNW 563
+ W
Sbjct: 286 SAW 288
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 92/217 (42%), Gaps = 22/217 (10%)
Query: 271 TDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAF---RSFDSECEVLRNVRH 327
++++ LG ++G V + ++ T+ A+ V + ++RA + E + + + H
Sbjct: 6 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 64
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
N++K + + L LE+ G L D +E +I + A + H
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGEL----------FDRIEP-DIGMPEPDAQRFFHQ 113
Query: 388 GHSSV------HIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGY 441
+ V I H D+KP N+LLDE +SDFG+ + T+ Y
Sbjct: 114 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
Query: 442 MAPEYGLEGIVSAK-CDVYSYGVLLMETFTRKRPTDE 477
+APE A+ DV+S G++L + P D+
Sbjct: 174 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 103/256 (40%), Gaps = 22/256 (8%)
Query: 239 RCRNRNTKKSDHEDFLPLAIWRRTSYL---DIQRATDEFNECNLLGTSSFGSVYK-GTIS 294
R R + K D+E L + Y ++ AT + LG SFG V++
Sbjct: 61 RSREPSPKTEDNEGVLLTEKLKPVDYEYREEVHWATHQLR----LGRGSFGEVHRMEDKQ 116
Query: 295 DGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGS 354
G A+K L++ RA C L + R ++ + + + + +E + GS
Sbjct: 117 TGFQCAVKKVRLEVFRAEELM--ACAGLTSPR---IVPLYGAVREGPWVNIFMELLEGGS 171
Query: 355 LEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLD-ENMVAH 413
L + L L L + LEYLH S I+H D+K N+LL + A
Sbjct: 172 LGQ-LVKEQGCLPEDRALYYLGQALEGLEYLH----SRRILHGDVKADNVLLSSDGSHAA 226
Query: 414 VSDFGIYKLL---GEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT 470
+ DFG L G G+ + T +MAPE L AK DV+S +++
Sbjct: 227 LCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLN 286
Query: 471 RKRPTDEMFIGEMSLR 486
P + F G + L+
Sbjct: 287 GCHPWTQFFRGPLCLK 302
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 103/227 (45%), Gaps = 48/227 (21%)
Query: 267 IQRATDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLERAFRSF------DSEC 319
I + + + +G+ ++GSV G VA+K +L R F+S E
Sbjct: 23 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 78
Query: 320 EVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEK----WLYSHNYFLDI-----LE 370
+L++++H N+I +L F P SLE+ +L +H D+ +
Sbjct: 79 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 126
Query: 371 RLN------IMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424
+L ++ + L+Y+H S IIH DLKP+N+ ++E+ + DFG+ +
Sbjct: 127 KLTDDHVQFLIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 179
Query: 425 EGEDSVRQTMTMATIGYMAPEYGLEGI-VSAKCDVYSYGVLLMETFT 470
+D + T +AT Y APE L + + D++S G ++ E T
Sbjct: 180 HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 224
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 101/227 (44%), Gaps = 48/227 (21%)
Query: 267 IQRATDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLERAFRSF------DSEC 319
I + + + +G+ ++GSV G VA+K +L R F+S E
Sbjct: 19 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 74
Query: 320 EVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEK----WLYSHNYFLDI-----LE 370
+L++++H N+I +L F P SLE+ +L +H D+ +
Sbjct: 75 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 122
Query: 371 RLN------IMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424
+L ++ + L+Y+H S IIH DLKP+N+ ++E+ + DFG+ +
Sbjct: 123 KLTDDHVQFLIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 178
Query: 425 EGEDSVRQTMTMATIGYMAPEYGLEGI-VSAKCDVYSYGVLLMETFT 470
+ T +AT Y APE L + + D++S G ++ E T
Sbjct: 179 D-----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 220
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 100/214 (46%), Gaps = 32/214 (14%)
Query: 274 FNECNLLGTSSFGSVYKGTIS-DGTDVAIKV----FNLQL--ERAFRSFDSECEVLRNVR 326
+ + +G+ ++G+V G VAIK F +L +RA+R E +L+++R
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYR----ELRLLKHMR 82
Query: 327 HRNLIKILSSYSNP----DFKA--LVLEFMPNGSLEKWLYSHNYFLDILERLNIMI-DVG 379
H N+I +L ++ DF LV+ FM G+ L H + +R+ ++ +
Sbjct: 83 HENVIGLLDVFTPDETLDDFTDFYLVMPFM--GTDLGKLMKHEKLGE--DRIQFLVYQML 138
Query: 380 SALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATI 439
L Y+H + IIH DLKP N+ ++E+ + DFG L DS + T
Sbjct: 139 KGLRYIH----AAGIIHRDLKPGNLAVNEDCELKILDFG----LARQADS-EMXGXVVTR 189
Query: 440 GYMAPEYGLEGI-VSAKCDVYSYGVLLMETFTRK 472
Y APE L + + D++S G ++ E T K
Sbjct: 190 WYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 121/303 (39%), Gaps = 36/303 (11%)
Query: 272 DEFNECNLLGTSSFGSVYK-GTISDGTDVAIKVFNLQLERAFR------SFDSECEVLRN 324
D ++ LG+ F V K S G A K + ++ R + E +L+
Sbjct: 11 DYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 325 VRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEY 384
++H N+I + Y N L+LE + G L +L + L E + + + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYY 129
Query: 385 LHNGHSSVHIIHCDLKPTNI-LLDENMVA---HVSDFGIYKLLGEGEDSVRQTMTMATIG 440
LH S+ I H DLKP NI LLD N+ + DFG+ + G + T
Sbjct: 130 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPE 182
Query: 441 YMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEV 500
++APE + + D++S GV+ + P F+G+ L V
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP----FLGDTK---------QETLANV 229
Query: 501 VDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVKFLDDAAA 560
N E++ FS + DF ++ P R+ + D + + IK K A +
Sbjct: 230 SAVNYEFEDEYFS---NTSALAKDFIRRLLVKDPKKRMTIQD-SLQHPWIKPKDTQQALS 285
Query: 561 TNW 563
+ W
Sbjct: 286 SAW 288
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 92/217 (42%), Gaps = 22/217 (10%)
Query: 271 TDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAF---RSFDSECEVLRNVRH 327
++++ LG ++G V + ++ T+ A+ V + ++RA + E + + + H
Sbjct: 5 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
N++K + + L LE+ G L D +E +I + A + H
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGEL----------FDRIEP-DIGMPEPDAQRFFHQ 112
Query: 388 GHSSV------HIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGY 441
+ V I H D+KP N+LLDE +SDFG+ + T+ Y
Sbjct: 113 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 442 MAPEYGLEGIVSAK-CDVYSYGVLLMETFTRKRPTDE 477
+APE A+ DV+S G++L + P D+
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 92/217 (42%), Gaps = 22/217 (10%)
Query: 271 TDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAF---RSFDSECEVLRNVRH 327
++++ LG ++G V + ++ T+ A+ V + ++RA + E + + + H
Sbjct: 6 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 64
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
N++K + + L LE+ G L D +E +I + A + H
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGEL----------FDRIEP-DIGMPEPDAQRFFHQ 113
Query: 388 GHSSV------HIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGY 441
+ V I H D+KP N+LLDE +SDFG+ + T+ Y
Sbjct: 114 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
Query: 442 MAPEYGLEGIVSAK-CDVYSYGVLLMETFTRKRPTDE 477
+APE A+ DV+S G++L + P D+
Sbjct: 174 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 103/227 (45%), Gaps = 48/227 (21%)
Query: 267 IQRATDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLERAFRSF------DSEC 319
I + + + +G+ ++GSV G VA+K +L R F+S E
Sbjct: 23 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 78
Query: 320 EVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEK----WLYSHNYFLDI-----LE 370
+L++++H N+I +L F P SLE+ +L +H D+ +
Sbjct: 79 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 126
Query: 371 RLN------IMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424
+L ++ + L+Y+H S IIH DLKP+N+ ++E+ + DFG+ +
Sbjct: 127 KLTDDHVQFLIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 179
Query: 425 EGEDSVRQTMTMATIGYMAPEYGLEGI-VSAKCDVYSYGVLLMETFT 470
+D + T +AT Y APE L + + D++S G ++ E T
Sbjct: 180 HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 224
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 128/331 (38%), Gaps = 53/331 (16%)
Query: 272 DEFNECNLLGTSSFGSVYK-GTISDGTDVAIKVFNLQLERAFR------SFDSECEVLRN 324
D ++ LG+ F V K S G A K + ++ R + E +L+
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 325 VRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEY 384
++H N+I + Y N L+LE + G L +L + L E + + + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYY 129
Query: 385 LHNGHSSVHIIHCDLKPTNI-LLDENMVA---HVSDFGIYKLLGEGEDSVRQTMTMATIG 440
LH S+ I H DLKP NI LLD N+ + DFG+ + G + T
Sbjct: 130 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPE 182
Query: 441 YMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEV 500
++APE + + D++S GV+ + P F+G+ L V
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP----FLGDTK---------QETLANV 229
Query: 501 VDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAA----KLKKIKVKFLD 556
N E++ FS + DF ++ P R+ + D+ K K +
Sbjct: 230 SAVNYEFEDEYFS---NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSR 286
Query: 557 DAAATN------------WRNFHCVSLLTLC 575
A+A N W+ V L++LC
Sbjct: 287 KASAVNMEKFKKFAARKKWK--QSVRLISLC 315
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 101/227 (44%), Gaps = 48/227 (21%)
Query: 267 IQRATDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLERAFRSF------DSEC 319
I + + + +G+ ++GSV G VA+K +L R F+S E
Sbjct: 23 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK----KLSRPFQSIIHAKRTYREL 78
Query: 320 EVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEK----WLYSHNYFLDI-----LE 370
+L++++H N+I +L F P SLE+ +L +H D+ +
Sbjct: 79 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 126
Query: 371 RLN------IMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424
+L ++ + L+Y+H S IIH DLKP+N+ ++E+ + DFG+ +
Sbjct: 127 KLTDDHVQFLIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 182
Query: 425 EGEDSVRQTMTMATIGYMAPEYGLEGI-VSAKCDVYSYGVLLMETFT 470
+ T +AT Y APE L + + D++S G ++ E T
Sbjct: 183 D-----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 224
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 77/174 (44%), Gaps = 32/174 (18%)
Query: 317 SECEVLRNVRHRNLIKILSSYSNPDFKAL--VLEFMPNGSLE----------KWLYSHNY 364
E ++LR +RH+N+I+++ N + + + V+E+ G E +H Y
Sbjct: 55 KEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGY 114
Query: 365 FLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424
F +++ LEYLH S I+H D+KP N+LL +S G+ + L
Sbjct: 115 FCQLID----------GLEYLH----SQGIVHKDIKPGNLLLTTGGTLKISALGVAEALH 160
Query: 425 --EGEDSVRQTMTMATIGYMAPEY--GLEGIVSAKCDVYSYGVLLMETFTRKRP 474
+D+ R + + + PE GL+ K D++S GV L T P
Sbjct: 161 PFAADDTCR--TSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYP 212
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 121/310 (39%), Gaps = 39/310 (12%)
Query: 272 DEFNECNLLGTSSFGSVYK-GTISDGTDVAIKVFNLQLERAFR------SFDSECEVLRN 324
D ++ LG+ F V K S G A K + ++ R + E +L+
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 325 VRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEY 384
++H N+I + Y N L+LE + G L +L + L E + + + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYY 129
Query: 385 LHNGHSSVHIIHCDLKPTNI-LLDENMVA---HVSDFGIYKLLGEGEDSVRQTMTMATIG 440
LH S+ I H DLKP NI LLD N+ + DFG+ + G + T
Sbjct: 130 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPE 182
Query: 441 YMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEV 500
++APE + + D++S GV+ + P F+G+ L V
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP----FLGDTK---------QETLANV 229
Query: 501 VDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAA----KLKKIKVKFLD 556
N E++ FS + DF ++ P R+ + D+ K K +
Sbjct: 230 SAVNYEFEDEYFS---NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSR 286
Query: 557 DAAATNWRNF 566
A+A N F
Sbjct: 287 KASAVNMEKF 296
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 113/283 (39%), Gaps = 35/283 (12%)
Query: 272 DEFNECNLLGTSSFGSVYK-GTISDGTDVAIKVFNLQLERAFR------SFDSECEVLRN 324
D ++ LG+ F V K S G A K + ++ R + E +L+
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 325 VRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEY 384
++H N+I + Y N L+LE + G L +L + L E + + + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYY 129
Query: 385 LHNGHSSVHIIHCDLKPTNI-LLDENMVA---HVSDFGIYKLLGEGEDSVRQTMTMATIG 440
LH S+ I H DLKP NI LLD N+ + DFG+ + G + T
Sbjct: 130 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPE 182
Query: 441 YMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEV 500
++APE + + D++S GV+ + P F+G+ L V
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP----FLGDTK---------QETLANV 229
Query: 501 VDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDA 543
N E++ FS + DF ++ P R+ + D+
Sbjct: 230 SAVNYEFEDEYFS---NTSALAKDFIRRLLVKDPKKRMTIQDS 269
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 101/227 (44%), Gaps = 48/227 (21%)
Query: 267 IQRATDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFN------LQLERAFRSFDSEC 319
I + + + +G+ ++GSV G VA+K + + +R +R E
Sbjct: 29 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYR----EL 84
Query: 320 EVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEK----WLYSHNYFLDI-----LE 370
+L++++H N+I +L F P SLE+ +L +H D+ +
Sbjct: 85 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 132
Query: 371 RLN------IMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424
+L ++ + L+Y+H S IIH DLKP+N+ ++E+ + DFG+ +
Sbjct: 133 KLTDDHVQFLIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 188
Query: 425 EGEDSVRQTMTMATIGYMAPEYGLEGI-VSAKCDVYSYGVLLMETFT 470
+ T +AT Y APE L + + D++S G ++ E T
Sbjct: 189 D-----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 230
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 100/227 (44%), Gaps = 48/227 (21%)
Query: 267 IQRATDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLERAFRSF------DSEC 319
I + + +G+ ++GSV G VA+K +L R F+S E
Sbjct: 27 IWEVPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVK----KLSRPFQSIIHAKRTYREL 82
Query: 320 EVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEK----WLYSHNYFLDI-----LE 370
+L++++H N+I +L F P SLE+ +L +H D+ +
Sbjct: 83 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 130
Query: 371 RLN------IMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424
+L ++ + L+Y+H S IIH DLKP+N+ ++E+ + DFG+ +
Sbjct: 131 KLTDDHVQFLIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 186
Query: 425 EGEDSVRQTMTMATIGYMAPEYGLEGI-VSAKCDVYSYGVLLMETFT 470
+ T +AT Y APE L + + D++S G ++ E T
Sbjct: 187 D-----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 228
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 101/227 (44%), Gaps = 48/227 (21%)
Query: 267 IQRATDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLERAFRSF------DSEC 319
I + + + +G+ ++GSV G VA+K +L R F+S E
Sbjct: 13 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK----KLSRPFQSIIHAKRTYREL 68
Query: 320 EVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEK----WLYSHNYFLDILERLN-- 373
+L++++H N+I +L F P SLE+ +L +H D+ +
Sbjct: 69 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCA 116
Query: 374 ---------IMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424
++ + L+Y+H S IIH DLKP+N+ ++E+ + DFG+ +
Sbjct: 117 KLTDDHVQFLIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 169
Query: 425 EGEDSVRQTMTMATIGYMAPEYGLEGI-VSAKCDVYSYGVLLMETFT 470
+D + T +AT Y APE L + + D++S G ++ E T
Sbjct: 170 HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 214
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 101/227 (44%), Gaps = 48/227 (21%)
Query: 267 IQRATDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLERAFRSF------DSEC 319
I + + + +G+ ++GSV G VA+K +L R F+S E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 72
Query: 320 EVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEK----WLYSHNYFLDI-----LE 370
+L++++H N+I +L F P SLE+ +L +H D+ +
Sbjct: 73 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKSQ 120
Query: 371 RLN------IMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424
+L ++ + L+Y+H S IIH DLKP+N+ ++E+ + DFG+ +
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDSELKILDFGLCRHTD 176
Query: 425 EGEDSVRQTMTMATIGYMAPEYGLEGI-VSAKCDVYSYGVLLMETFT 470
+ T +AT Y APE L + + D++S G ++ E T
Sbjct: 177 D-----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 114/287 (39%), Gaps = 35/287 (12%)
Query: 268 QRATDEFNECNLLGTSSFGSVYK-GTISDGTDVAIKVFNLQLERAFR------SFDSECE 320
+ D ++ LG+ F V K S G A K + ++ R + E
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 321 VLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGS 380
+L+ ++H N+I + Y N L+LE + G L +L + L E + + +
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILN 125
Query: 381 ALEYLHNGHSSVHIIHCDLKPTNI-LLDENMVA---HVSDFGIYKLLGEGEDSVRQTMTM 436
+ YLH S+ I H DLKP NI LLD N+ + DFG+ + G +
Sbjct: 126 GVYYLH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIF 178
Query: 437 ATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHG 496
T ++APE + + D++S GV+ + P F+G+
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP----FLGDTK---------QET 225
Query: 497 LTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDA 543
L V N E++ FS + DF ++ P R+ + D+
Sbjct: 226 LANVSAVNYEFEDEYFS---NTSALAKDFIRRLLVKDPKKRMTIQDS 269
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 114/287 (39%), Gaps = 35/287 (12%)
Query: 268 QRATDEFNECNLLGTSSFGSVYK-GTISDGTDVAIKVFNLQLERAFR------SFDSECE 320
+ D ++ LG+ F V K S G A K + ++ R + E
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 321 VLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGS 380
+L+ ++H N+I + Y N L+LE + G L +L + L E + + +
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILN 125
Query: 381 ALEYLHNGHSSVHIIHCDLKPTNI-LLDENMVA---HVSDFGIYKLLGEGEDSVRQTMTM 436
+ YLH S+ I H DLKP NI LLD N+ + DFG+ + G +
Sbjct: 126 GVYYLH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIF 178
Query: 437 ATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHG 496
T ++APE + + D++S GV+ + P F+G+
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP----FLGDTK---------QET 225
Query: 497 LTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDA 543
L V N E++ FS + DF ++ P R+ + D+
Sbjct: 226 LANVSAVNYEFEDEYFS---NTSALAKDFIRRLLVKDPKKRMTIQDS 269
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 121/303 (39%), Gaps = 36/303 (11%)
Query: 272 DEFNECNLLGTSSFGSVYK-GTISDGTDVAIKVFNLQLERAFR------SFDSECEVLRN 324
D ++ LG+ F V K S G A K + ++ R + E +L+
Sbjct: 11 DYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 325 VRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEY 384
++H N+I + Y N L+LE + G L +L + L E + + + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYY 129
Query: 385 LHNGHSSVHIIHCDLKPTNI-LLDENMVA---HVSDFGIYKLLGEGEDSVRQTMTMATIG 440
LH S+ I H DLKP NI LLD N+ + DFG+ + G + T
Sbjct: 130 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPE 182
Query: 441 YMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEV 500
++APE + + D++S GV+ + P F+G+ L V
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP----FLGDTK---------QETLANV 229
Query: 501 VDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVKFLDDAAA 560
N E++ FS + DF ++ P R+ + D + + IK K A +
Sbjct: 230 SAVNYEFEDEYFS---NTSALAKDFIRRLLVKDPKKRMTIQD-SLQHPWIKPKDTQQALS 285
Query: 561 TNW 563
+ W
Sbjct: 286 SAW 288
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 89/192 (46%), Gaps = 13/192 (6%)
Query: 280 LGTSSFGSVYKGT-ISDGTDVAIKVFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSS 336
LG +F V + + G + A K+ N + R + + E + R ++H N++++ S
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 337 YSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIH 396
S L+ + + G L + + + Y+ + + + + + A+ + H + ++H
Sbjct: 90 ISEEGHHYLIFDLVTGGELFEDIVAREYYSEA-DASHCIQQILEAVLHCHQ----MGVVH 144
Query: 397 CDLKPTNILLDENM---VAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVS 453
DLKP N+LL + ++DFG+ + EGE T GY++PE +
Sbjct: 145 RDLKPENLLLASKLKGAAVKLADFGL-AIEVEGEQQAWFGFA-GTPGYLSPEVLRKDPYG 202
Query: 454 AKCDVYSYGVLL 465
D+++ GV+L
Sbjct: 203 KPVDLWACGVIL 214
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 114/287 (39%), Gaps = 35/287 (12%)
Query: 268 QRATDEFNECNLLGTSSFGSVYK-GTISDGTDVAIKVFNLQLERAFR------SFDSECE 320
+ D ++ LG+ F V K S G A K + ++ R + E
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 321 VLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGS 380
+L+ ++H N+I + Y N L+LE + G L +L + L E + + +
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILN 125
Query: 381 ALEYLHNGHSSVHIIHCDLKPTNI-LLDENMVA---HVSDFGIYKLLGEGEDSVRQTMTM 436
+ YLH S+ I H DLKP NI LLD N+ + DFG+ + G +
Sbjct: 126 GVYYLH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIF 178
Query: 437 ATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHG 496
T ++APE + + D++S GV+ + P F+G+
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP----FLGDTK---------QET 225
Query: 497 LTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDA 543
L V N E++ FS + DF ++ P R+ + D+
Sbjct: 226 LANVSAVNYEFEDEYFS---NTSALAKDFIRRLLVKDPKKRMTIQDS 269
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 114/287 (39%), Gaps = 35/287 (12%)
Query: 268 QRATDEFNECNLLGTSSFGSVYK-GTISDGTDVAIKVFNLQLERAFR------SFDSECE 320
+ D ++ LG+ F V K S G A K + ++ R + E
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 321 VLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGS 380
+L+ ++H N+I + Y N L+LE + G L +L + L E + + +
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILN 125
Query: 381 ALEYLHNGHSSVHIIHCDLKPTNI-LLDENMVA---HVSDFGIYKLLGEGEDSVRQTMTM 436
+ YLH S+ I H DLKP NI LLD N+ + DFG+ + G +
Sbjct: 126 GVYYLH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIF 178
Query: 437 ATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHG 496
T ++APE + + D++S GV+ + P F+G+
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP----FLGDTK---------QET 225
Query: 497 LTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDA 543
L V N E++ FS + DF ++ P R+ + D+
Sbjct: 226 LANVSAVNYEFEDEYFS---NTSALAKDFIRRLLVKDPKKRMTIQDS 269
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 78/162 (48%), Gaps = 29/162 (17%)
Query: 317 SECEVLRNVRHRNLIKILSSYSNP--DFKALVLEFMPNGSLEKWL--------YSHNYFL 366
E +L+ + H N++K++ +P D +V E + G + + + YF
Sbjct: 85 QEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQ 144
Query: 367 DILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEG 426
D+++ +EYLH IIH D+KP+N+L+ E+ ++DFG+ +G
Sbjct: 145 DLIK----------GIEYLHYQK----IIHRDIKPSNLLVGEDGHIKIADFGVSNEF-KG 189
Query: 427 EDSVRQTMTMATIGYMAPEYGLE--GIVSAKC-DVYSYGVLL 465
D++ T+ T +MAPE E I S K DV++ GV L
Sbjct: 190 SDALLSN-TVGTPAFMAPESLSETRKIFSGKALDVWAMGVTL 230
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 92/208 (44%), Gaps = 30/208 (14%)
Query: 278 NLLGTSSFGSVYKGTIS--DGTDVAIKVFNLQLERAFRSFDSECEVLRNVR-HRNLIKIL 334
LLG ++ V +G +S +G + A+K+ Q + E E L + ++N+++++
Sbjct: 19 ELLGEGAYAKV-QGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELI 77
Query: 335 SSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHI 394
+ + LV E + GS+ + +F + E ++ DV +AL++LH + I
Sbjct: 78 EFFEDDTRFYLVFEKLQGGSILAHIQKQKHF-NEREASRVVRDVAAALDFLH----TKGI 132
Query: 395 IHCDLKPTNILL---DENMVAHVSDFGIYKLLGEGED---------SVRQTMTMATIGYM 442
H DLKP NIL ++ + DF LG G + T + YM
Sbjct: 133 AHRDLKPENILCESPEKVSPVKICDFD----LGSGMKLNNSCTPITTPELTTPCGSAEYM 188
Query: 443 APEY-----GLEGIVSAKCDVYSYGVLL 465
APE +CD++S GV+L
Sbjct: 189 APEVVEVFTDQATFYDKRCDLWSLGVVL 216
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 96/215 (44%), Gaps = 20/215 (9%)
Query: 270 ATDEFNECNLLGTSSFGSVYKGT-ISDGTDVAIKVFNLQ--LERAFRSFDSECEVLRNVR 326
AT + +G ++G+VYK G VA+K + E S E +LR +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 327 ---HRNLIKIL----SSYSNPDFK-ALVLEFMPNGSLEKWL-YSHNYFLDILERLNIMID 377
H N+++++ +S ++ + K LV E + + L +L + L ++M
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 378 VGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMA 437
L++LH I+H DLKP NIL+ ++DFG+ ++ + +
Sbjct: 121 FLRGLDFLHANC----IVHRDLKPENILVTSGGTVKLADFGLARIYSY---QMALAPVVV 173
Query: 438 TIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRK 472
T+ Y APE L+ + D++S G + E F RK
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 93/203 (45%), Gaps = 13/203 (6%)
Query: 269 RATDEFNECNLLGTSSFGSVYKGT-ISDGTDVAIKVFNLQL--ERAFRSFDSECEVLRNV 325
R T+E+ LG +F V + + G + A + N + R + + E + R +
Sbjct: 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLL 67
Query: 326 RHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYL 385
+H N++++ S S L+ + + G L + + + Y+ + + + + + A+ +
Sbjct: 68 KHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEA-DASHCIQQILEAVLHC 126
Query: 386 HNGHSSVHIIHCDLKPTNILLDENM---VAHVSDFGIYKLLGEGEDSVRQTMTMATIGYM 442
H + ++H +LKP N+LL + ++DFG+ + EGE T GY+
Sbjct: 127 HQ----MGVVHRNLKPENLLLASKLKGAAVKLADFGL-AIEVEGEQQAWFGFA-GTPGYL 180
Query: 443 APEYGLEGIVSAKCDVYSYGVLL 465
+PE + D+++ GV+L
Sbjct: 181 SPEVLRKDPYGKPVDLWACGVIL 203
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 103/227 (45%), Gaps = 48/227 (21%)
Query: 267 IQRATDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLERAFRSF------DSEC 319
I + + + +G+ ++GSV G VA+K +L R F+S E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 72
Query: 320 EVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEK----WLYSHNYFLDI-----LE 370
+L++++H N+I +L F P SLE+ +L +H D+ +
Sbjct: 73 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 371 RLN------IMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424
+L ++ + L+Y+H S IIH DLKP+N+ ++E+ + D+G+ +
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDYGLAR--- 173
Query: 425 EGEDSVRQTMTMATIGYMAPEYGLEGI-VSAKCDVYSYGVLLMETFT 470
+D + T +AT Y APE L + + D++S G ++ E T
Sbjct: 174 HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 92/217 (42%), Gaps = 22/217 (10%)
Query: 271 TDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAF---RSFDSECEVLRNVRH 327
++++ LG ++G V + ++ T+ A+ V + ++RA + E + + H
Sbjct: 6 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNH 64
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
N++K + + L LE+ G L D +E +I + A + H
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGEL----------FDRIEP-DIGMPEPDAQRFFHQ 113
Query: 388 ---GHSSVH---IIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGY 441
G +H I H D+KP N+LLDE +SDFG+ + T+ Y
Sbjct: 114 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
Query: 442 MAPEYGLEGIVSAK-CDVYSYGVLLMETFTRKRPTDE 477
+APE A+ DV+S G++L + P D+
Sbjct: 174 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 100/227 (44%), Gaps = 48/227 (21%)
Query: 267 IQRATDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLERAFRSF------DSEC 319
I + + + +G+ ++GSV G VA+K +L R F+S E
Sbjct: 37 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK----KLSRPFQSIIHAKRTYREL 92
Query: 320 EVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEK----WLYSHNYFLDI-----LE 370
+L++++H N+I +L F P SLE+ +L +H D+ +
Sbjct: 93 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 140
Query: 371 RLN------IMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424
+L ++ + L+Y+H S IIH DLKP+N+ ++E+ + DFG+ +
Sbjct: 141 KLTDDHVQFLIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 196
Query: 425 EGEDSVRQTMTMATIGYMAPEYGLEGI-VSAKCDVYSYGVLLMETFT 470
+ +AT Y APE L + + D++S G ++ E T
Sbjct: 197 D-----EMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 238
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 96/215 (44%), Gaps = 20/215 (9%)
Query: 270 ATDEFNECNLLGTSSFGSVYKGT-ISDGTDVAIKVFNLQ--LERAFRSFDSECEVLRNVR 326
AT + +G ++G+VYK G VA+K + E S E +LR +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 327 ---HRNLIKIL----SSYSNPDFK-ALVLEFMPNGSLEKWL-YSHNYFLDILERLNIMID 377
H N+++++ +S ++ + K LV E + + L +L + L ++M
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 378 VGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMA 437
L++LH I+H DLKP NIL+ ++DFG+ ++ + +
Sbjct: 121 FLRGLDFLHANC----IVHRDLKPENILVTSGGTVKLADFGLARIYSY---QMALDPVVV 173
Query: 438 TIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRK 472
T+ Y APE L+ + D++S G + E F RK
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 14/145 (9%)
Query: 367 DILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEG 426
DIL + I + + ALE+LH S + +IH D+KP+N+L++ DFGI L
Sbjct: 136 DILGK--IAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKXCDFGISGYL--- 187
Query: 427 EDSVRQTMTMATIGYMA-----PEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIG 481
D V + + Y A PE +G S K D++S G+ +E + P D
Sbjct: 188 VDDVAKDIDAGCKPYXAPERINPELNQKG-YSVKSDIWSLGITXIELAILRFPYDSWGTP 246
Query: 482 EMSLRRWVKESLPHGLTEVVDANLV 506
L++ V+E P + A V
Sbjct: 247 FQQLKQVVEEPSPQLPADKFSAEFV 271
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 102/227 (44%), Gaps = 48/227 (21%)
Query: 267 IQRATDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLERAFRSF------DSEC 319
I + + + +G+ ++GSV G VA+K +L R F+S E
Sbjct: 13 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK----KLSRPFQSIIHAKRTYREL 68
Query: 320 EVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEK----WLYSHNYFLDI-----LE 370
+L++++H N+I +L F P SLE+ +L +H D+ +
Sbjct: 69 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 116
Query: 371 RLN------IMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424
+L ++ + L+Y+H S IIH DLKP+N+ ++E+ + DFG+ +
Sbjct: 117 KLTDDHVQFLIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 169
Query: 425 EGEDSVRQTMTMATIGYMAPEYGLEGI-VSAKCDVYSYGVLLMETFT 470
+D + +AT Y APE L + + D++S G ++ E T
Sbjct: 170 HTDDEM--AGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 214
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 91/217 (41%), Gaps = 22/217 (10%)
Query: 271 TDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAF---RSFDSECEVLRNVRH 327
++++ LG + G V + ++ T+ A+ V + ++RA + E + + + H
Sbjct: 5 VEDWDLVQTLGEGAAGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 328 RNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
N++K + + L LE+ G L D +E +I + A + H
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGEL----------FDRIEP-DIGMPEPDAQRFFHQ 112
Query: 388 GHSSV------HIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGY 441
+ V I H D+KP N+LLDE +SDFG+ + T+ Y
Sbjct: 113 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 442 MAPEYGLEGIVSAK-CDVYSYGVLLMETFTRKRPTDE 477
+APE A+ DV+S G++L + P D+
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%)
Query: 390 SSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLE 449
+S + IH DL NILL + + DFG+ + + + V + + +MAPE
Sbjct: 185 ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFN 244
Query: 450 GIVSAKCDVYSYGVLLMETFT 470
+ + + DV+SYG+ L E F+
Sbjct: 245 CVYTFESDVWSYGIFLWELFS 265
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 98/217 (45%), Gaps = 24/217 (11%)
Query: 270 ATDEFNECNLLGTSSFGSVYKGT-ISDGTDVAIKVFNLQ--LERAFRSFDSECEVLRNVR 326
AT + +G ++G+VYK G VA+K + E S E +LR +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 327 ---HRNLIKIL----SSYSNPDFKA-LVLEFMPNGSLEKWL-YSHNYFLDILERLNIMID 377
H N+++++ +S ++ + K LV E + + L +L + L ++M
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 378 VGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTM--T 435
L++LH I+H DLKP NIL+ ++DFG+ ++ S + +
Sbjct: 121 FLRGLDFLHANC----IVHRDLKPENILVTSGGTVKLADFGLARIY-----SYQMALFPV 171
Query: 436 MATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRK 472
+ T+ Y APE L+ + D++S G + E F RK
Sbjct: 172 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 102/227 (44%), Gaps = 48/227 (21%)
Query: 267 IQRATDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLERAFRSF------DSEC 319
I + + + +G+ ++GSV G VA+K +L R F+S E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK----KLSRPFQSIIHAKRTYREL 72
Query: 320 EVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEK----WLYSHNYFLDI-----LE 370
+L++++H N+I +L F P SLE+ +L +H D+ +
Sbjct: 73 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 371 RLN------IMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424
+L ++ + L+Y+H S IIH DLKP+N+ ++E+ + DFG+ +
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 173
Query: 425 EGEDSVRQTMTMATIGYMAPEYGLEGI-VSAKCDVYSYGVLLMETFT 470
+D + +AT Y APE L + + D++S G ++ E T
Sbjct: 174 HTDDEM--AGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 102/227 (44%), Gaps = 48/227 (21%)
Query: 267 IQRATDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLERAFRSF------DSEC 319
I + + + +G+ ++GSV G VA+K +L R F+S E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK----KLSRPFQSIIHAKRTYREL 72
Query: 320 EVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEK----WLYSHNYFLDI-----LE 370
+L++++H N+I +L F P SLE+ +L +H D+ +
Sbjct: 73 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 371 RLN------IMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424
+L ++ + L+Y+H S IIH DLKP+N+ ++E+ + DFG+ +
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 173
Query: 425 EGEDSVRQTMTMATIGYMAPEYGLEGI-VSAKCDVYSYGVLLMETFT 470
+D + +AT Y APE L + + D++S G ++ E T
Sbjct: 174 HTDDEM--AGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 100/227 (44%), Gaps = 48/227 (21%)
Query: 267 IQRATDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLERAFRSF------DSEC 319
I + + + +G+ ++GSV G VA+K +L R F+S E
Sbjct: 40 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 95
Query: 320 EVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEK----WLYSHNYFLDI-----LE 370
+L++++H N+I +L F P SLE+ +L +H D+ +
Sbjct: 96 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 143
Query: 371 RLN------IMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424
+L ++ + L+Y+H S IIH DLKP+N+ ++E+ + DFG+ +
Sbjct: 144 KLTDDHVQFLIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 199
Query: 425 EGEDSVRQTMTMATIGYMAPEYGLEGI-VSAKCDVYSYGVLLMETFT 470
+ +AT Y APE L + + D++S G ++ E T
Sbjct: 200 D-----EMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 241
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%)
Query: 390 SSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLE 449
+S + IH DL NILL + + DFG+ + + + V + + +MAPE
Sbjct: 178 ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFN 237
Query: 450 GIVSAKCDVYSYGVLLMETFT 470
+ + + DV+SYG+ L E F+
Sbjct: 238 CVYTFESDVWSYGIFLWELFS 258
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%)
Query: 390 SSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLE 449
+S + IH DL NILL + + DFG+ + + + V + + +MAPE
Sbjct: 162 ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFN 221
Query: 450 GIVSAKCDVYSYGVLLMETFT 470
+ + + DV+SYG+ L E F+
Sbjct: 222 CVYTFESDVWSYGIFLWELFS 242
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%)
Query: 390 SSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLE 449
+S + IH DL NILL + + DFG+ + + + V + + +MAPE
Sbjct: 180 ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFN 239
Query: 450 GIVSAKCDVYSYGVLLMETFT 470
+ + + DV+SYG+ L E F+
Sbjct: 240 CVYTFESDVWSYGIFLWELFS 260
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%)
Query: 390 SSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLE 449
+S + IH DL NILL + + DFG+ + + + V + + +MAPE
Sbjct: 185 ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFN 244
Query: 450 GIVSAKCDVYSYGVLLMETFT 470
+ + + DV+SYG+ L E F+
Sbjct: 245 CVYTFESDVWSYGIFLWELFS 265
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 92/221 (41%), Gaps = 49/221 (22%)
Query: 278 NLLGTSSFGSVYKGTISDGTDVAI--KVFNLQLERAFRSF------DSECEVLRNVRHRN 329
L G GS G++ D + KV +L R F+S E +L++++H N
Sbjct: 21 RLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHEN 80
Query: 330 LIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDIL----------------ERLN 373
+I +L F P S+E +S Y + L E +
Sbjct: 81 VIGLLDV------------FTPATSIED--FSEVYLVTTLMGADLNNIVKCQALSDEHVQ 126
Query: 374 IMI-DVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQ 432
++ + L+Y+H S IIH DLKP+N+ ++E+ + DFG+ + E
Sbjct: 127 FLVYQLLRGLKYIH----SAGIIHRDLKPSNVAVNEDCELRILDFGLARQADE-----EM 177
Query: 433 TMTMATIGYMAPEYGLEGI-VSAKCDVYSYGVLLMETFTRK 472
T +AT Y APE L + + D++S G ++ E K
Sbjct: 178 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 92/221 (41%), Gaps = 49/221 (22%)
Query: 278 NLLGTSSFGSVYKGTISDGTDVAI--KVFNLQLERAFRSF------DSECEVLRNVRHRN 329
L G GS G++ D + KV +L R F+S E +L++++H N
Sbjct: 29 RLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHEN 88
Query: 330 LIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDIL----------------ERLN 373
+I +L F P S+E +S Y + L E +
Sbjct: 89 VIGLLDV------------FTPATSIED--FSEVYLVTTLMGADLNNIVKCQALSDEHVQ 134
Query: 374 IMI-DVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQ 432
++ + L+Y+H S IIH DLKP+N+ ++E+ + DFG+ + E
Sbjct: 135 FLVYQLLRGLKYIH----SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADE-----EM 185
Query: 433 TMTMATIGYMAPEYGLEGI-VSAKCDVYSYGVLLMETFTRK 472
T +AT Y APE L + + D++S G ++ E K
Sbjct: 186 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 92/209 (44%), Gaps = 25/209 (11%)
Query: 278 NLLGTSSFGSVYKGTISDGTDVAI--KVFNLQLERAFRSF------DSECEVLRNVRHRN 329
L G GS G++ D + KV +L R F+S E +L++++H N
Sbjct: 29 RLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHEN 88
Query: 330 LIKILSSY----SNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI-DVGSALEY 384
+I +L + S DF + L G+ + D E + ++ + L+Y
Sbjct: 89 VIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSD--EHVQFLVYQLLRGLKY 146
Query: 385 LHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAP 444
+H S IIH DLKP+N+ ++E+ + DFG+ + E T +AT Y AP
Sbjct: 147 IH----SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADE-----EMTGYVATRWYRAP 197
Query: 445 EYGLEGI-VSAKCDVYSYGVLLMETFTRK 472
E L + + D++S G ++ E K
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 54/114 (47%), Gaps = 13/114 (11%)
Query: 368 ILERL--NIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGE 425
I ER+ + + + AL YL H +IH D+KP+NILLDE + DFGI G
Sbjct: 121 IPERILGKMTVAIVKALYYLKEKHG---VIHRDVKPSNILLDERGQIKLCDFGIS---GR 174
Query: 426 GEDSVRQTMTMATIGYMAPEY-----GLEGIVSAKCDVYSYGVLLMETFTRKRP 474
D + + YMAPE + + DV+S G+ L+E T + P
Sbjct: 175 LVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 9/100 (9%)
Query: 380 SALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATI 439
+ ++ L++ ++ IIH D+KP+NILLD + + DFGI G+ DS+ +T
Sbjct: 133 ATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGIS---GQLVDSIAKTRDAGCR 189
Query: 440 GYMAPE-----YGLEGIVSAKCDVYSYGVLLMETFTRKRP 474
YMAPE +G + DV+S G+ L E T + P
Sbjct: 190 PYMAPERIDPSASRQG-YDVRSDVWSLGITLYELATGRFP 228
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 93/210 (44%), Gaps = 25/210 (11%)
Query: 272 DEFNECNLLGTSSFGSVYKGTISD-GTDVAIKVFNLQLER-------AFRSFDSECEVLR 323
+++ + +G S+G V+K D G VAIK F L+ E A R E +L+
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKF-LESEDDPVIKKIALR----EIRMLK 57
Query: 324 NVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERL--NIMIDVGSA 381
++H NL+ +L + LV E+ + L + Y + E L +I A
Sbjct: 58 QLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHEL---DRYQRGVPEHLVKSITWQTLQA 114
Query: 382 LEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGY 441
+ + H + IH D+KP NIL+ ++ V + DFG +LL D +AT Y
Sbjct: 115 VNFCHKHNC----IHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDD--EVATRWY 168
Query: 442 MAPEYGL-EGIVSAKCDVYSYGVLLMETFT 470
+PE + + DV++ G + E +
Sbjct: 169 RSPELLVGDTQYGPPVDVWAIGCVFAELLS 198
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 102/227 (44%), Gaps = 48/227 (21%)
Query: 267 IQRATDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLERAFRSF------DSEC 319
I + + + +G+ ++GSV G VA+K +L R F+S E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 72
Query: 320 EVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEK----WLYSHNYFLDI-----LE 370
+L++++H N+I +L F P SLE+ +L +H D+ +
Sbjct: 73 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 371 RLN------IMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424
+L ++ + L+Y+H S IIH DLKP+N+ ++E+ + FG+ +
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILGFGLAR--- 173
Query: 425 EGEDSVRQTMTMATIGYMAPEYGLEGI-VSAKCDVYSYGVLLMETFT 470
+D + T +AT Y APE L + + D++S G ++ E T
Sbjct: 174 HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 120/303 (39%), Gaps = 36/303 (11%)
Query: 272 DEFNECNLLGTSSFGSVYK-GTISDGTDVAIKVFNLQLERAFR------SFDSECEVLRN 324
D ++ LG+ F V K S G A K + ++ R + E +L+
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 325 VRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEY 384
++H N+I + Y N L+ E + G L +L + L E + + + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILIGELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYY 129
Query: 385 LHNGHSSVHIIHCDLKPTNI-LLDENMVA---HVSDFGIYKLLGEGEDSVRQTMTMATIG 440
LH S+ I H DLKP NI LLD N+ + DFG+ + G + T
Sbjct: 130 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPE 182
Query: 441 YMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEV 500
++APE + + D++S GV+ + P F+G+ L V
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP----FLGDTK---------QETLANV 229
Query: 501 VDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVKFLDDAAA 560
N E++ FS + DF ++ P R+ + D + + IK K A +
Sbjct: 230 SAVNYEFEDEYFS---NTSALAKDFIRRLLVKDPKKRMTIQD-SLQHPWIKPKDTQQALS 285
Query: 561 TNW 563
+ W
Sbjct: 286 SAW 288
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 90/218 (41%), Gaps = 15/218 (6%)
Query: 265 LDIQRATDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRN 324
LD + TD FN +LG SFG V GT+ + L+ + + D EC ++
Sbjct: 13 LDRVKLTD-FNFLMVLGKGSFGKVMLAD-RKGTEELYAIKILKKDVVIQDDDVECTMVEK 70
Query: 325 V------RHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDV 378
+ L ++ S + D V+E++ G L + F + + + ++
Sbjct: 71 RVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEP-QAVFYAAEI 129
Query: 379 GSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMAT 438
L +LH II+ DLK N++LD ++DFG+ K D V T
Sbjct: 130 SIGLFFLHKRG----IIYRDLKLDNVMLDSEGHIKIADFGMCK--EHMMDGVTTREFCGT 183
Query: 439 IGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTD 476
Y+APE D ++YGVLL E + P D
Sbjct: 184 PDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 102/227 (44%), Gaps = 48/227 (21%)
Query: 267 IQRATDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLERAFRSF------DSEC 319
I + + + +G+ ++GSV G VA+K +L R F+S E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 72
Query: 320 EVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEK----WLYSHNYFLDI-----LE 370
+L++++H N+I +L F P SLE+ +L +H D+ +
Sbjct: 73 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 371 RLN------IMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424
+L ++ + L+Y+H S IIH DLKP+N+ ++E+ + D G+ +
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDAGLAR--- 173
Query: 425 EGEDSVRQTMTMATIGYMAPEYGLEGI-VSAKCDVYSYGVLLMETFT 470
+D + T +AT Y APE L + + D++S G ++ E T
Sbjct: 174 HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 91/196 (46%), Gaps = 25/196 (12%)
Query: 286 GSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKAL 345
GS +G + D AI N+ +++ R F ++ R R L+K+++ + + L
Sbjct: 33 GSGAQGIVCAAYD-AILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVN---HKNIIGL 88
Query: 346 VLEFMPNGSLEKW--LYSHNYFLDI-----------LERLNIMI-DVGSALEYLHNGHSS 391
+ F P SLE++ +Y +D ER++ ++ + +++LH S
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLH----S 144
Query: 392 VHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGI 451
IIH DLKP+NI++ + + DFG+ + G S T + T Y APE L
Sbjct: 145 AGIIHRDLKPSNIVVKSDATLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVILGMG 201
Query: 452 VSAKCDVYSYGVLLME 467
D++S GV++ E
Sbjct: 202 YKENVDIWSVGVIMGE 217
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 91/196 (46%), Gaps = 25/196 (12%)
Query: 286 GSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKAL 345
GS +G + D AI N+ +++ R F ++ R R L+K+++ + + L
Sbjct: 33 GSGAQGIVVAAYD-AILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVN---HKNIIGL 88
Query: 346 VLEFMPNGSLEKW--LYSHNYFLDI-----------LERLNIMI-DVGSALEYLHNGHSS 391
+ F P SLE++ +Y +D ER++ ++ + +++LH S
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLH----S 144
Query: 392 VHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGI 451
IIH DLKP+NI++ + + DFG+ + G S T + T Y APE L
Sbjct: 145 AGIIHRDLKPSNIVVKSDATLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVILGMG 201
Query: 452 VSAKCDVYSYGVLLME 467
D++S GV++ E
Sbjct: 202 YKENVDIWSVGVIMGE 217
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 102/227 (44%), Gaps = 48/227 (21%)
Query: 267 IQRATDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLERAFRSF------DSEC 319
I + + + +G+ ++GSV G VA+K +L R F+S E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 72
Query: 320 EVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEK----WLYSHNYFLDI-----LE 370
+L++++H N+I +L F P SLE+ +L +H D+ +
Sbjct: 73 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 371 RLN------IMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424
+L ++ + L+Y+H S IIH DLKP+N+ ++E+ + D G+ +
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDRGLAR--- 173
Query: 425 EGEDSVRQTMTMATIGYMAPEYGLEGI-VSAKCDVYSYGVLLMETFT 470
+D + T +AT Y APE L + + D++S G ++ E T
Sbjct: 174 HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 102/227 (44%), Gaps = 48/227 (21%)
Query: 267 IQRATDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLERAFRSF------DSEC 319
I + + + +G+ ++GSV G VA+K +L R F+S E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK----KLSRPFQSIIHAKRTYREL 72
Query: 320 EVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEK----WLYSHNYFLDI-----LE 370
+L++++H N+I +L F P SLE+ +L +H D+ +
Sbjct: 73 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 371 RLN------IMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424
+L ++ + L+Y+H S IIH DLKP+N+ ++E+ + DF + +
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFYLAR--- 173
Query: 425 EGEDSVRQTMTMATIGYMAPEYGLEGI-VSAKCDVYSYGVLLMETFT 470
+D + T +AT Y APE L + + D++S G ++ E T
Sbjct: 174 HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 89/188 (47%), Gaps = 25/188 (13%)
Query: 309 ERAFRSFDSECEVLRNVRHRNLIKILSSYSNP----DFK--ALVLEFMPNGSLEKWLYSH 362
+RA+R E +++ V H+N+I +L+ ++ +F+ LV+E M + +L + +
Sbjct: 68 KRAYR----ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQME 122
Query: 363 NYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKL 422
LD ++ + +++LH S IIH DLKP+NI++ + + DFG+ +
Sbjct: 123 ---LDHERMSYLLYQMLXGIKHLH----SAGIIHRDLKPSNIVVKSDXTLKILDFGLART 175
Query: 423 LGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGE 482
G S T + T Y APE L D++S G ++ E K +F G
Sbjct: 176 AGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGR 228
Query: 483 MSLRRWVK 490
+ +W K
Sbjct: 229 DYIDQWNK 236
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 102/227 (44%), Gaps = 48/227 (21%)
Query: 267 IQRATDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLERAFRSF------DSEC 319
I + + + +G+ ++GSV G VA+K +L R F+S E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 72
Query: 320 EVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEK----WLYSHNYFLDI-----LE 370
+L++++H N+I +L F P SLE+ +L +H D+ +
Sbjct: 73 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 371 RLN------IMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424
+L ++ + L+Y+H S IIH DLKP+N+ ++E+ + D G+ +
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDGGLAR--- 173
Query: 425 EGEDSVRQTMTMATIGYMAPEYGLEGI-VSAKCDVYSYGVLLMETFT 470
+D + T +AT Y APE L + + D++S G ++ E T
Sbjct: 174 HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 14/101 (13%)
Query: 370 ERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDE---NMVAHVSDFGIYKLLGEG 426
E IM +G A++YLH S++I H D+KP N+L N + ++DFG K
Sbjct: 162 EASEIMKSIGEAIQYLH----SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----- 212
Query: 427 EDSVRQTMTMA--TIGYMAPEYGLEGIVSAKCDVYSYGVLL 465
E + ++T T Y+APE CD++S GV++
Sbjct: 213 ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 253
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 97/208 (46%), Gaps = 33/208 (15%)
Query: 280 LGTSSFGSVYKGTIS-DGTDVAIKVFNLQLE------RAFRSFDSECEVLRNVRHRNLIK 332
+G+ ++GSV G VAIK + + RA+R E +L++++H N+I
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYR----ELLLLKHMQHENVIG 105
Query: 333 ILSSYSNP-------DFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYL 385
+L ++ DF LV+ FM L+K + + + ++ L + G L+Y+
Sbjct: 106 LLDVFTPASSLRNFYDF-YLVMPFM-QTDLQK-IMGMEFSEEKIQYLVYQMLKG--LKYI 160
Query: 386 HNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPE 445
H S ++H DLKP N+ ++E+ + DFG+ + T + T Y APE
Sbjct: 161 H----SAGVVHRDLKPGNLAVNEDCELKILDFGLAR-----HADAEMTGYVVTRWYRAPE 211
Query: 446 YGLEGI-VSAKCDVYSYGVLLMETFTRK 472
L + + D++S G ++ E T K
Sbjct: 212 VILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 14/101 (13%)
Query: 370 ERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDE---NMVAHVSDFGIYKLLGEG 426
E IM +G A++YLH S++I H D+KP N+L N + ++DFG K
Sbjct: 124 EASEIMKSIGEAIQYLH----SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----- 174
Query: 427 EDSVRQTMTMA--TIGYMAPEYGLEGIVSAKCDVYSYGVLL 465
E + ++T T Y+APE CD++S GV++
Sbjct: 175 ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 215
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 14/101 (13%)
Query: 370 ERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDE---NMVAHVSDFGIYKLLGEG 426
E IM +G A++YLH S++I H D+KP N+L N + ++DFG K
Sbjct: 122 EASEIMKSIGEAIQYLH----SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----- 172
Query: 427 EDSVRQTMTMA--TIGYMAPEYGLEGIVSAKCDVYSYGVLL 465
E + ++T T Y+APE CD++S GV++
Sbjct: 173 ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 213
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 14/101 (13%)
Query: 370 ERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDE---NMVAHVSDFGIYKLLGEG 426
E IM +G A++YLH S++I H D+KP N+L N + ++DFG K
Sbjct: 123 EASEIMKSIGEAIQYLH----SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----- 173
Query: 427 EDSVRQTMTMA--TIGYMAPEYGLEGIVSAKCDVYSYGVLL 465
E + ++T T Y+APE CD++S GV++
Sbjct: 174 ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 214
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 14/101 (13%)
Query: 370 ERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDE---NMVAHVSDFGIYKLLGEG 426
E IM +G A++YLH S++I H D+KP N+L N + ++DFG K
Sbjct: 168 EASEIMKSIGEAIQYLH----SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----- 218
Query: 427 EDSVRQTMTMA--TIGYMAPEYGLEGIVSAKCDVYSYGVLL 465
E + ++T T Y+APE CD++S GV++
Sbjct: 219 ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 259
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 14/101 (13%)
Query: 370 ERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDE---NMVAHVSDFGIYKLLGEG 426
E IM +G A++YLH S++I H D+KP N+L N + ++DFG K
Sbjct: 132 EASEIMKSIGEAIQYLH----SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----- 182
Query: 427 EDSVRQTMTMA--TIGYMAPEYGLEGIVSAKCDVYSYGVLL 465
E + ++T T Y+APE CD++S GV++
Sbjct: 183 ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 223
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 91/211 (43%), Gaps = 22/211 (10%)
Query: 274 FNECNLLGTSSFGSVYKGTIS-DGTDVAIK---VFNLQL--ERAFRSFDSECEVLRNVRH 327
+ + +G ++G V T VAIK F Q +R R E ++L RH
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLR----EIQILLRFRH 100
Query: 328 RNLIKILSSYSNPDFKAL----VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALE 383
N+I I +A+ +++ + L K L S D + + + L+
Sbjct: 101 ENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHI--CYFLYQILRGLK 158
Query: 384 YLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVR-QTMTMATIGYM 442
Y+H S +++H DLKP+N+L++ + DFG+ ++ D T +AT Y
Sbjct: 159 YIH----SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYR 214
Query: 443 APEYGLEGIVSAKC-DVYSYGVLLMETFTRK 472
APE L K D++S G +L E + +
Sbjct: 215 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 89/188 (47%), Gaps = 25/188 (13%)
Query: 309 ERAFRSFDSECEVLRNVRHRNLIKILSSYSNP----DFK--ALVLEFMPNGSLEKWLYSH 362
+RA+R E +++ V H+N+I +L+ ++ +F+ LV+E M + +L + +
Sbjct: 68 KRAYR----ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQME 122
Query: 363 NYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKL 422
LD ++ + +++LH S IIH DLKP+NI++ + + DFG+ +
Sbjct: 123 ---LDHERMSYLLYQMLCGIKHLH----SAGIIHRDLKPSNIVVKSDXTLKILDFGLART 175
Query: 423 LGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGE 482
G S T + T Y APE L D++S G ++ E K +F G
Sbjct: 176 AGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGR 228
Query: 483 MSLRRWVK 490
+ +W K
Sbjct: 229 DYIDQWNK 236
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 91/245 (37%), Gaps = 71/245 (28%)
Query: 280 LGTSSFGSVYKGTISDGTDV--AIKVFNLQLERAFRSFD-----SECEVLRNVRHRNLIK 332
+G S+G V + I + T AIK+ N R D +E +++ + H N+ +
Sbjct: 34 IGQGSYG-VVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIAR 92
Query: 333 ILSSYSNPDFKALVLEFMPNGSLEKWL--------------------------------- 359
+ Y + + LV+E G L L
Sbjct: 93 LYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAING 152
Query: 360 --YSHNYFLDILER----LNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAH 413
+ LD ++R NIM + SAL YLHN I H D+KP N L N
Sbjct: 153 SIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQ----GICHRDIKPENFLFSTNKSFE 208
Query: 414 VS--DFGIYK---LLGEGEDSVRQTMTMATIGYMAPE--------YGLEGIVSAKCDVYS 460
+ DFG+ K L GE T T ++APE YG KCD +S
Sbjct: 209 IKLVDFGLSKEFYKLNNGE-YYGMTTKAGTPYFVAPEVLNTTNESYG------PKCDAWS 261
Query: 461 YGVLL 465
GVLL
Sbjct: 262 AGVLL 266
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 14/101 (13%)
Query: 370 ERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDE---NMVAHVSDFGIYKLLGEG 426
E IM +G A++YLH S++I H D+KP N+L N + ++DFG K
Sbjct: 118 EASEIMKSIGEAIQYLH----SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----- 168
Query: 427 EDSVRQTMTMA--TIGYMAPEYGLEGIVSAKCDVYSYGVLL 465
E + ++T T Y+APE CD++S GV++
Sbjct: 169 ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 209
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 14/101 (13%)
Query: 370 ERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDE---NMVAHVSDFGIYKLLGEG 426
E IM +G A++YLH S++I H D+KP N+L N + ++DFG K
Sbjct: 117 EASEIMKSIGEAIQYLH----SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----- 167
Query: 427 EDSVRQTMTMA--TIGYMAPEYGLEGIVSAKCDVYSYGVLL 465
E + ++T T Y+APE CD++S GV++
Sbjct: 168 ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 208
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 14/101 (13%)
Query: 370 ERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDE---NMVAHVSDFGIYKLLGEG 426
E IM +G A++YLH S++I H D+KP N+L N + ++DFG K
Sbjct: 116 EASEIMKSIGEAIQYLH----SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----- 166
Query: 427 EDSVRQTMTMA--TIGYMAPEYGLEGIVSAKCDVYSYGVLL 465
E + ++T T Y+APE CD++S GV++
Sbjct: 167 ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 207
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 14/101 (13%)
Query: 370 ERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDE---NMVAHVSDFGIYKLLGEG 426
E IM +G A++YLH S++I H D+KP N+L N + ++DFG K
Sbjct: 118 EASEIMKSIGEAIQYLH----SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----- 168
Query: 427 EDSVRQTMTMA--TIGYMAPEYGLEGIVSAKCDVYSYGVLL 465
E + ++T T Y+APE CD++S GV++
Sbjct: 169 ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 209
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 11/99 (11%)
Query: 370 ERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILL---DENMVAHVSDFGIYKLLGEG 426
E IM D+G+A+++LH S +I H D+KP N+L +++ V ++DFG K E
Sbjct: 129 EAAEIMRDIGTAIQFLH----SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK---ET 181
Query: 427 EDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLL 465
+ QT T Y+APE CD++S GV++
Sbjct: 182 TQNALQT-PCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 219
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 89/188 (47%), Gaps = 25/188 (13%)
Query: 309 ERAFRSFDSECEVLRNVRHRNLIKILSSYSNP----DFK--ALVLEFMPNGSLEKWLYSH 362
+RA+R E +++ V H+N+I +L+ ++ +F+ LV+E M + +L + +
Sbjct: 68 KRAYR----ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQME 122
Query: 363 NYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKL 422
LD ++ + +++LH S IIH DLKP+NI++ + + DFG+ +
Sbjct: 123 ---LDHERMSYLLYQMLXGIKHLH----SAGIIHRDLKPSNIVVKSDXTLKILDFGLART 175
Query: 423 LGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGE 482
G S T + T Y APE L D++S G ++ E K +F G
Sbjct: 176 AGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGR 228
Query: 483 MSLRRWVK 490
+ +W K
Sbjct: 229 DYIDQWNK 236
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 70/159 (44%), Gaps = 8/159 (5%)
Query: 318 ECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYS--HNYFLDILERLNIM 375
E ++L RH N+I I P + + ++ +E LY L +
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 134
Query: 376 IDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVR-QTM 434
+ L+Y+H S +++H DLKP+N+LL+ + DFG+ ++ D T
Sbjct: 135 YQILRGLKYIH----SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTE 190
Query: 435 TMATIGYMAPEYGLEGIVSAKC-DVYSYGVLLMETFTRK 472
+AT Y APE L K D++S G +L E + +
Sbjct: 191 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 41/212 (19%)
Query: 280 LGTSSFGSVYKGTIS-DGTDVAIKVFNLQLE------RAFRSFDSECEVLRNVRHRNLIK 332
+G+ ++GSV G VAIK + + RA+R E +L++++H N+I
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYR----ELLLLKHMQHENVIG 87
Query: 333 ILSSYSNP-------DFKALVLEFMPNGSLEKWL---YSHNYFLDILERLNIMI-DVGSA 381
+L ++ DF LV+ FM L+K + +S E++ ++ +
Sbjct: 88 LLDVFTPASSLRNFYDF-YLVMPFM-QTDLQKIMGLKFSE-------EKIQYLVYQMLKG 138
Query: 382 LEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGY 441
L+Y+H S ++H DLKP N+ ++E+ + DFG+ + T + T Y
Sbjct: 139 LKYIH----SAGVVHRDLKPGNLAVNEDCELKILDFGLAR-----HADAEMTGYVVTRWY 189
Query: 442 MAPEYGLEGI-VSAKCDVYSYGVLLMETFTRK 472
APE L + + D++S G ++ E T K
Sbjct: 190 RAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 11/99 (11%)
Query: 370 ERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILL---DENMVAHVSDFGIYKLLGEG 426
E IM D+G+A+++LH S +I H D+KP N+L +++ V ++DFG K E
Sbjct: 110 EAAEIMRDIGTAIQFLH----SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK---ET 162
Query: 427 EDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLL 465
+ QT T Y+APE CD++S GV++
Sbjct: 163 TQNALQT-PCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 200
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 89/188 (47%), Gaps = 25/188 (13%)
Query: 309 ERAFRSFDSECEVLRNVRHRNLIKILSSYSNP----DFK--ALVLEFMPNGSLEKWLYSH 362
+RA+R E +++ V H+N+I +L+ ++ +F+ LV+E M + +L + +
Sbjct: 61 KRAYR----ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQME 115
Query: 363 NYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKL 422
LD ++ + +++LH S IIH DLKP+NI++ + + DFG+ +
Sbjct: 116 ---LDHERMSYLLYQMLXGIKHLH----SAGIIHRDLKPSNIVVKSDXTLKILDFGLART 168
Query: 423 LGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGE 482
G S T + T Y APE L D++S G ++ E K +F G
Sbjct: 169 AGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGR 221
Query: 483 MSLRRWVK 490
+ +W K
Sbjct: 222 DYIDQWNK 229
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 70/159 (44%), Gaps = 8/159 (5%)
Query: 318 ECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYS--HNYFLDILERLNIM 375
E ++L RH N+I I P + + ++ +E LY L +
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 130
Query: 376 IDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVR-QTM 434
+ L+Y+H S +++H DLKP+N+LL+ + DFG+ ++ D T
Sbjct: 131 YQILRGLKYIH----SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTE 186
Query: 435 TMATIGYMAPEYGLEGIVSAKC-DVYSYGVLLMETFTRK 472
+AT Y APE L K D++S G +L E + +
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 70/159 (44%), Gaps = 8/159 (5%)
Query: 318 ECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYS--HNYFLDILERLNIM 375
E ++L RH N+I I P + + ++ +E LY L +
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 134
Query: 376 IDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVR-QTM 434
+ L+Y+H S +++H DLKP+N+LL+ + DFG+ ++ D T
Sbjct: 135 YQILRGLKYIH----SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTE 190
Query: 435 TMATIGYMAPEYGLEGIVSAKC-DVYSYGVLLMETFTRK 472
+AT Y APE L K D++S G +L E + +
Sbjct: 191 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 70/159 (44%), Gaps = 8/159 (5%)
Query: 318 ECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYS--HNYFLDILERLNIM 375
E ++L RH N+I I P + + ++ +E LY L +
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 130
Query: 376 IDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVR-QTM 434
+ L+Y+H S +++H DLKP+N+LL+ + DFG+ ++ D T
Sbjct: 131 YQILRGLKYIH----SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTE 186
Query: 435 TMATIGYMAPEYGLEGIVSAKC-DVYSYGVLLMETFTRK 472
+AT Y APE L K D++S G +L E + +
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 70/159 (44%), Gaps = 8/159 (5%)
Query: 318 ECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYS--HNYFLDILERLNIM 375
E ++L RH N+I I P + + ++ +E LY L +
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 130
Query: 376 IDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVR-QTM 434
+ L+Y+H S +++H DLKP+N+LL+ + DFG+ ++ D T
Sbjct: 131 YQILRGLKYIH----SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTE 186
Query: 435 TMATIGYMAPEYGLEGIVSAKC-DVYSYGVLLMETFTRK 472
+AT Y APE L K D++S G +L E + +
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 14/101 (13%)
Query: 370 ERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDE---NMVAHVSDFGIYKLLGEG 426
E IM +G A++YLH S++I H D+KP N+L N + ++DFG K
Sbjct: 116 EASEIMKSIGEAIQYLH----SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----- 166
Query: 427 EDSVRQTMTMA--TIGYMAPEYGLEGIVSAKCDVYSYGVLL 465
E + ++T T Y+APE CD++S GV++
Sbjct: 167 ETTSHNSLTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 207
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 70/159 (44%), Gaps = 8/159 (5%)
Query: 318 ECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYS--HNYFLDILERLNIM 375
E ++L RH N+I I P + + ++ +E LY L +
Sbjct: 79 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 138
Query: 376 IDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVR-QTM 434
+ L+Y+H S +++H DLKP+N+LL+ + DFG+ ++ D T
Sbjct: 139 YQILRGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 194
Query: 435 TMATIGYMAPEYGLEGIVSAKC-DVYSYGVLLMETFTRK 472
+AT Y APE L K D++S G +L E + +
Sbjct: 195 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 70/159 (44%), Gaps = 8/159 (5%)
Query: 318 ECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYS--HNYFLDILERLNIM 375
E ++L RH N+I I P + + ++ +E LY L +
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 130
Query: 376 IDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVR-QTM 434
+ L+Y+H S +++H DLKP+N+LL+ + DFG+ ++ D T
Sbjct: 131 YQILRGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 186
Query: 435 TMATIGYMAPEYGLEGIVSAKC-DVYSYGVLLMETFTRK 472
+AT Y APE L K D++S G +L E + +
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 86/188 (45%), Gaps = 30/188 (15%)
Query: 327 HRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILE------RLNIMIDVGS 380
H N+I+ S + F + LE + N +L+ + S N + L+ ++++ + S
Sbjct: 86 HPNVIRYYCSETTDRFLYIALE-LCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIAS 144
Query: 381 ALEYLHNGHSSVHIIHCDLKPTNILLD-------------ENMVAHVSDFGIYKLLGEGE 427
+ +LH S+ IIH DLKP NIL+ EN+ +SDFG+ K L G+
Sbjct: 145 GVAHLH----SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQ 200
Query: 428 DSVRQTMT--MATIGYMAPEYGLEGI---VSAKCDVYSYGVLLMETFTR-KRPTDEMFIG 481
R + T G+ APE E ++ D++S G + ++ K P + +
Sbjct: 201 XXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR 260
Query: 482 EMSLRRWV 489
E ++ R +
Sbjct: 261 ESNIIRGI 268
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 70/159 (44%), Gaps = 8/159 (5%)
Query: 318 ECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYS--HNYFLDILERLNIM 375
E ++L RH N+I I P + + ++ +E LY L +
Sbjct: 73 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 132
Query: 376 IDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVR-QTM 434
+ L+Y+H S +++H DLKP+N+LL+ + DFG+ ++ D T
Sbjct: 133 YQILRGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 188
Query: 435 TMATIGYMAPEYGLEGIVSAKC-DVYSYGVLLMETFTRK 472
+AT Y APE L K D++S G +L E + +
Sbjct: 189 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 70/159 (44%), Gaps = 8/159 (5%)
Query: 318 ECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYS--HNYFLDILERLNIM 375
E ++L RH N+I I P + + ++ +E LY L +
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 134
Query: 376 IDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVR-QTM 434
+ L+Y+H S +++H DLKP+N+LL+ + DFG+ ++ D T
Sbjct: 135 YQILRGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 190
Query: 435 TMATIGYMAPEYGLEGIVSAKC-DVYSYGVLLMETFTRK 472
+AT Y APE L K D++S G +L E + +
Sbjct: 191 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 70/159 (44%), Gaps = 8/159 (5%)
Query: 318 ECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYS--HNYFLDILERLNIM 375
E ++L RH N+I I P + + ++ +E LY L +
Sbjct: 91 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 150
Query: 376 IDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVR-QTM 434
+ L+Y+H S +++H DLKP+N+LL+ + DFG+ ++ D T
Sbjct: 151 YQILRGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 206
Query: 435 TMATIGYMAPEYGLEGIVSAKC-DVYSYGVLLMETFTRK 472
+AT Y APE L K D++S G +L E + +
Sbjct: 207 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 70/159 (44%), Gaps = 8/159 (5%)
Query: 318 ECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYS--HNYFLDILERLNIM 375
E ++L RH N+I I P + + ++ +E LY L +
Sbjct: 76 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 135
Query: 376 IDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVR-QTM 434
+ L+Y+H S +++H DLKP+N+LL+ + DFG+ ++ D T
Sbjct: 136 YQILRGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 191
Query: 435 TMATIGYMAPEYGLEGIVSAKC-DVYSYGVLLMETFTRK 472
+AT Y APE L K D++S G +L E + +
Sbjct: 192 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 70/159 (44%), Gaps = 8/159 (5%)
Query: 318 ECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYS--HNYFLDILERLNIM 375
E ++L RH N+I I P + + ++ +E LY L +
Sbjct: 77 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 136
Query: 376 IDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVR-QTM 434
+ L+Y+H S +++H DLKP+N+LL+ + DFG+ ++ D T
Sbjct: 137 YQILRGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 192
Query: 435 TMATIGYMAPEYGLEGIVSAKC-DVYSYGVLLMETFTRK 472
+AT Y APE L K D++S G +L E + +
Sbjct: 193 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 70/159 (44%), Gaps = 8/159 (5%)
Query: 318 ECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYS--HNYFLDILERLNIM 375
E ++L RH N+I I P + + ++ +E LY L +
Sbjct: 68 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 127
Query: 376 IDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVR-QTM 434
+ L+Y+H S +++H DLKP+N+LL+ + DFG+ ++ D T
Sbjct: 128 YQILRGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 183
Query: 435 TMATIGYMAPEYGLEGIVSAKC-DVYSYGVLLMETFTRK 472
+AT Y APE L K D++S G +L E + +
Sbjct: 184 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 70/159 (44%), Gaps = 8/159 (5%)
Query: 318 ECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYS--HNYFLDILERLNIM 375
E ++L RH N+I I P + + ++ +E LY L +
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 134
Query: 376 IDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVR-QTM 434
+ L+Y+H S +++H DLKP+N+LL+ + DFG+ ++ D T
Sbjct: 135 YQILRGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 190
Query: 435 TMATIGYMAPEYGLEGIVSAKC-DVYSYGVLLMETFTRK 472
+AT Y APE L K D++S G +L E + +
Sbjct: 191 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 70/159 (44%), Gaps = 8/159 (5%)
Query: 318 ECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYS--HNYFLDILERLNIM 375
E ++L RH N+I I P + + ++ +E LY L +
Sbjct: 69 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 128
Query: 376 IDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVR-QTM 434
+ L+Y+H S +++H DLKP+N+LL+ + DFG+ ++ D T
Sbjct: 129 YQILRGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 184
Query: 435 TMATIGYMAPEYGLEGIVSAKC-DVYSYGVLLMETFTRK 472
+AT Y APE L K D++S G +L E + +
Sbjct: 185 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 86/188 (45%), Gaps = 30/188 (15%)
Query: 327 HRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILE------RLNIMIDVGS 380
H N+I+ S + F + LE + N +L+ + S N + L+ ++++ + S
Sbjct: 86 HPNVIRYYCSETTDRFLYIALE-LCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIAS 144
Query: 381 ALEYLHNGHSSVHIIHCDLKPTNILLD-------------ENMVAHVSDFGIYKLLGEGE 427
+ +LH S+ IIH DLKP NIL+ EN+ +SDFG+ K L G+
Sbjct: 145 GVAHLH----SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQ 200
Query: 428 DSVRQTMT--MATIGYMAPEYGLEGI---VSAKCDVYSYGVLLMETFTR-KRPTDEMFIG 481
R + T G+ APE E ++ D++S G + ++ K P + +
Sbjct: 201 XXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR 260
Query: 482 EMSLRRWV 489
E ++ R +
Sbjct: 261 ESNIIRGI 268
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 70/159 (44%), Gaps = 8/159 (5%)
Query: 318 ECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYS--HNYFLDILERLNIM 375
E ++L RH N+I I P + + ++ +E LY L +
Sbjct: 69 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 128
Query: 376 IDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVR-QTM 434
+ L+Y+H S +++H DLKP+N+LL+ + DFG+ ++ D T
Sbjct: 129 YQILRGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 184
Query: 435 TMATIGYMAPEYGLEGIVSAKC-DVYSYGVLLMETFTRK 472
+AT Y APE L K D++S G +L E + +
Sbjct: 185 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 70/159 (44%), Gaps = 8/159 (5%)
Query: 318 ECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYS--HNYFLDILERLNIM 375
E ++L RH N+I I P + + ++ +E LY L +
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 130
Query: 376 IDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVR-QTM 434
+ L+Y+H S +++H DLKP+N+LL+ + DFG+ ++ D T
Sbjct: 131 YQILRGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 186
Query: 435 TMATIGYMAPEYGLEGIVSAKC-DVYSYGVLLMETFTRK 472
+AT Y APE L K D++S G +L E + +
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 83/203 (40%), Gaps = 23/203 (11%)
Query: 274 FNECNLLGTSSFGSVYK-GTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNV------- 325
F + LG S+G V+K + DG A+K + FR L V
Sbjct: 59 FQRLSRLGHGSYGEVFKVRSKEDGRLYAVK----RSMSPFRGPKDRARKLAEVGSHEKVG 114
Query: 326 RHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYL 385
+H +++ ++ L E SL++ + L + + D AL +L
Sbjct: 115 QHPCCVRLEQAWEEGGILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHL 173
Query: 386 HNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG-EGEDSVRQTMTMATIGYMAP 444
H S ++H D+KP NI L + DFG+ LG G V++ YMAP
Sbjct: 174 H----SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQE----GDPRYMAP 225
Query: 445 EYGLEGIVSAKCDVYSYGVLLME 467
E L+G DV+S G+ ++E
Sbjct: 226 EL-LQGSYGTAADVFSLGLTILE 247
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 101/216 (46%), Gaps = 25/216 (11%)
Query: 273 EFNECNLLGTSSFGSVYKGT-ISDGTDVAIKVFNLQLERAFRSFDS--ECEVLRNVRHRN 329
++ + +G +FG V+K G VA+K ++ E+ + E ++L+ ++H N
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 330 ---LIKILSSYSNPDFKA-----LVLEFMPN---GSLEKWLYSHNYFLDILERLNIMIDV 378
LI+I + ++P + LV +F + G L L + L ++R+ M+
Sbjct: 79 VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK--FTLSEIKRVMQMLLN 136
Query: 379 GSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSV--RQTMTM 436
G L Y+H I+H D+K N+L+ + V ++DFG+ + ++S R +
Sbjct: 137 G--LYYIHRNK----ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRV 190
Query: 437 ATIGYMAPEYGL-EGIVSAKCDVYSYGVLLMETFTR 471
T+ Y PE L E D++ G ++ E +TR
Sbjct: 191 VTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTR 226
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 101/216 (46%), Gaps = 25/216 (11%)
Query: 273 EFNECNLLGTSSFGSVYKGT-ISDGTDVAIKVFNLQLERAFRSFDS--ECEVLRNVRHRN 329
++ + +G +FG V+K G VA+K ++ E+ + E ++L+ ++H N
Sbjct: 18 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 77
Query: 330 ---LIKILSSYSNPDFKA-----LVLEFMPN---GSLEKWLYSHNYFLDILERLNIMIDV 378
LI+I + ++P + LV +F + G L L + L ++R+ M+
Sbjct: 78 VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK--FTLSEIKRVMQMLLN 135
Query: 379 GSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSV--RQTMTM 436
G L Y+H I+H D+K N+L+ + V ++DFG+ + ++S R +
Sbjct: 136 G--LYYIHRNK----ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRV 189
Query: 437 ATIGYMAPEYGL-EGIVSAKCDVYSYGVLLMETFTR 471
T+ Y PE L E D++ G ++ E +TR
Sbjct: 190 VTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTR 225
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 97/219 (44%), Gaps = 29/219 (13%)
Query: 286 GSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKAL 345
GS +G + D AI N+ +++ R F ++ R R L+K ++ + + L
Sbjct: 38 GSGAQGIVCAAYD-AILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN---HKNIIGL 93
Query: 346 VLEFMPNGSLEKW--LYSHNYFLDI-----------LERLNIMI-DVGSALEYLHNGHSS 391
+ F P SLE++ +Y +D ER++ ++ + +++LH S
Sbjct: 94 LNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH----S 149
Query: 392 VHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGI 451
IIH DLKP+NI++ + + DFG+ + G S T + T Y APE L
Sbjct: 150 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVILGMG 206
Query: 452 VSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVK 490
D++S G ++ E K +F G + +W K
Sbjct: 207 YKENVDLWSVGCIMGEMVCHKI----LFPGRDYIDQWNK 241
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 87/217 (40%), Gaps = 38/217 (17%)
Query: 272 DEFNECNLLGTSSFGSVYKGTISD-GTDVAIKV-----FNLQLERAFRSFDSECEVLRNV 325
D + C ++G F V + + G A+K+ F + E + +
Sbjct: 26 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 85
Query: 326 RHRNLIKILSSYSNPDFKALVLEFMPNGSL---------EKWLYSH----NYFLDILERL 372
+H +++++L +YS+ +V EFM L ++YS +Y ILE
Sbjct: 86 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILE-- 143
Query: 373 NIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILL---DENMVAHVSDFGIYKLLGEGEDS 429
AL Y H+ +IIH D+KP +LL + + + FG+ L GE
Sbjct: 144 --------ALRYCHDN----NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL--GESG 189
Query: 430 VRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLM 466
+ + T +MAPE DV+ GV+L
Sbjct: 190 LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILF 226
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 70/159 (44%), Gaps = 8/159 (5%)
Query: 318 ECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYS--HNYFLDILERLNIM 375
E ++L RH N+I I P + + ++ +E LY L +
Sbjct: 73 EIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 132
Query: 376 IDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVR-QTM 434
+ L+Y+H S +++H DLKP+N+LL+ + DFG+ ++ D T
Sbjct: 133 YQILRGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 188
Query: 435 TMATIGYMAPEYGLEGIVSAKC-DVYSYGVLLMETFTRK 472
+AT Y APE L K D++S G +L E + +
Sbjct: 189 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 90/196 (45%), Gaps = 25/196 (12%)
Query: 286 GSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKAL 345
GS +G + D AI N+ +++ R F ++ R R L+K+++ + + L
Sbjct: 33 GSGAQGIVCAAYD-AILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVN---HKNIIGL 88
Query: 346 VLEFMPNGSLEKW--LYSHNYFLDI-----------LERLNIMI-DVGSALEYLHNGHSS 391
+ F P SLE++ +Y +D ER++ ++ + +++LH S
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLH----S 144
Query: 392 VHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGI 451
IIH DLKP+NI++ + + DFG+ + G S T + T Y APE L
Sbjct: 145 AGIIHRDLKPSNIVVKSDATLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVILGMG 201
Query: 452 VSAKCDVYSYGVLLME 467
D++S G ++ E
Sbjct: 202 YKENVDIWSVGCIMGE 217
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 89/188 (47%), Gaps = 25/188 (13%)
Query: 309 ERAFRSFDSECEVLRNVRHRNLIKILSSYSNP----DFK--ALVLEFMPNGSLEKWLYSH 362
+RA+R E +++ V H+N+I +L+ ++ +F+ LV+E M + +L + +
Sbjct: 106 KRAYR----ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME 160
Query: 363 NYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKL 422
LD ++ + +++LH S IIH DLKP+NI++ + + DFG+ +
Sbjct: 161 ---LDHERMSYLLYQMLCGIKHLH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLART 213
Query: 423 LGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGE 482
G S T + T Y APE L D++S G ++ E K +F G
Sbjct: 214 AGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGR 266
Query: 483 MSLRRWVK 490
+ +W K
Sbjct: 267 DYIDQWNK 274
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 70/159 (44%), Gaps = 8/159 (5%)
Query: 318 ECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYS--HNYFLDILERLNIM 375
E ++L RH N+I I P + + ++ +E LY L +
Sbjct: 73 EIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 132
Query: 376 IDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVR-QTM 434
+ L+Y+H S +++H DLKP+N+LL+ + DFG+ ++ D T
Sbjct: 133 YQILRGLKYIH----SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTE 188
Query: 435 TMATIGYMAPEYGLEGIVSAKC-DVYSYGVLLMETFTRK 472
+AT Y APE L K D++S G +L E + +
Sbjct: 189 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 101/216 (46%), Gaps = 25/216 (11%)
Query: 273 EFNECNLLGTSSFGSVYKGT-ISDGTDVAIKVFNLQLERAFRSFDS--ECEVLRNVRHRN 329
++ + +G +FG V+K G VA+K ++ E+ + E ++L+ ++H N
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 330 ---LIKILSSYSNPDFKA-----LVLEFMPN---GSLEKWLYSHNYFLDILERLNIMIDV 378
LI+I + ++P + LV +F + G L L + L ++R+ M+
Sbjct: 79 VVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVK--FTLSEIKRVMQMLLN 136
Query: 379 GSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSV--RQTMTM 436
G L Y+H I+H D+K N+L+ + V ++DFG+ + ++S R +
Sbjct: 137 G--LYYIHRNK----ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRV 190
Query: 437 ATIGYMAPEYGL-EGIVSAKCDVYSYGVLLMETFTR 471
T+ Y PE L E D++ G ++ E +TR
Sbjct: 191 VTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTR 226
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 87/192 (45%), Gaps = 34/192 (17%)
Query: 327 HRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILE------RLNIMIDVGS 380
H N+I+ S + F + LE + N +L+ + S N + L+ ++++ + S
Sbjct: 68 HPNVIRYYCSETTDRFLYIALE-LCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIAS 126
Query: 381 ALEYLHNGHSSVHIIHCDLKPTNILLD-------------ENMVAHVSDFGIYKLLGEGE 427
+ +LH S+ IIH DLKP NIL+ EN+ +SDFG+ K L G+
Sbjct: 127 GVAHLH----SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQ 182
Query: 428 DSVRQTMT--MATIGYMAPEYGLEG-------IVSAKCDVYSYGVLLMETFTR-KRPTDE 477
S R + T G+ APE E ++ D++S G + ++ K P +
Sbjct: 183 SSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD 242
Query: 478 MFIGEMSLRRWV 489
+ E ++ R +
Sbjct: 243 KYSRESNIIRGI 254
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 103/226 (45%), Gaps = 20/226 (8%)
Query: 255 PLAIWRRTSYLDIQRATDEFNECNLLGTSSFGSVYKG-TISDGTDVAIKVFNLQLERAFR 313
P W S++ D++ LG + V++ I++ V +K+ + +
Sbjct: 20 PREYWDYASHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIK 79
Query: 314 SFDSECEVLRNVRH-RNLIKILSSYSNPDFK--ALVLEFMPNGSLEKWLYSHNYFLDILE 370
E ++L N+R N+I + +P + ALV E + N ++ LY DI
Sbjct: 80 R---EIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQ-LYQTLTDYDI-- 133
Query: 371 RLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLD-ENMVAHVSDFGIYKLLGEGEDS 429
R M ++ AL+Y H S+ I+H D+KP N+++D E+ + D+G+ + G++
Sbjct: 134 RF-YMYEILKALDYCH----SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY 188
Query: 430 VRQTMTMATIGYMAPEYGLE-GIVSAKCDVYSYGVLLMETFTRKRP 474
+ +A+ + PE ++ + D++S G +L RK P
Sbjct: 189 ---NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP 231
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 67/149 (44%), Gaps = 17/149 (11%)
Query: 323 RNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSAL 382
R++RH N+++ P A+++E+ G L + + + F + R + S +
Sbjct: 71 RSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARF-FFQQLLSGV 129
Query: 383 EYLHNGHSSVHIIHCDLKPTNILLDENMVAH--VSDFGIYKLLGEGEDSVRQTMTMATIG 440
Y H S+ I H DLK N LLD + + DFG K SV + +T+G
Sbjct: 130 SYCH----SMQICHRDLKLENTLLDGSPAPRLKICDFGYSK------SSVLHSQPKSTVG 179
Query: 441 ---YMAPEYGLEGIVSAK-CDVYSYGVLL 465
Y+APE L K DV+S GV L
Sbjct: 180 TPAYIAPEVLLRQEYDGKIADVWSCGVTL 208
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 101/216 (46%), Gaps = 25/216 (11%)
Query: 273 EFNECNLLGTSSFGSVYKGT-ISDGTDVAIKVFNLQLERAFRSFDS--ECEVLRNVRHRN 329
++ + +G +FG V+K G VA+K ++ E+ + E ++L+ ++H N
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 330 ---LIKILSSYSNPDFKA-----LVLEFMPN---GSLEKWLYSHNYFLDILERLNIMIDV 378
LI+I + ++P + LV +F + G L L + L ++R+ M+
Sbjct: 79 VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK--FTLSEIKRVMQMLLN 136
Query: 379 GSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSV--RQTMTM 436
G L Y+H I+H D+K N+L+ + V ++DFG+ + ++S R +
Sbjct: 137 G--LYYIHRNK----ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRV 190
Query: 437 ATIGYMAPEYGL-EGIVSAKCDVYSYGVLLMETFTR 471
T+ Y PE L E D++ G ++ E +TR
Sbjct: 191 VTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTR 226
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 89/189 (47%), Gaps = 27/189 (14%)
Query: 309 ERAFRSFDSECEVLRNVRHRNLIKILSSYSNP----DFK--ALVLEFMPNGSLEKWLYSH 362
+RA+R E +++ V H+N+I +L+ ++ +F+ LV+E M +
Sbjct: 68 KRAYR----ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMEL 123
Query: 363 NYFLDILERLNIMI-DVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYK 421
++ ER++ ++ + +++LH S IIH DLKP+NI++ + + DFG+ +
Sbjct: 124 DH-----ERMSYLLYQMLCGIKHLH----SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
Query: 422 LLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIG 481
G S T + T Y APE L D++S G ++ E K +F G
Sbjct: 175 TAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPG 227
Query: 482 EMSLRRWVK 490
+ +W K
Sbjct: 228 RDYIDQWNK 236
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 71/162 (43%), Gaps = 14/162 (8%)
Query: 318 ECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLN---- 373
E ++L RH N+I I P + + ++ +E LY L N
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK---LLKCQHLSNDHIC 131
Query: 374 -IMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVR- 431
+ + L+Y+H S +++H DLKP+N+LL+ + DFG+ ++ D
Sbjct: 132 YFLYQILRGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 187
Query: 432 QTMTMATIGYMAPEYGLEGIVSAKC-DVYSYGVLLMETFTRK 472
T +AT Y APE L K D++S G +L E + +
Sbjct: 188 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 90/196 (45%), Gaps = 25/196 (12%)
Query: 286 GSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKAL 345
GS +G + D AI N+ +++ R F ++ R R L+K+++ + + L
Sbjct: 33 GSGAQGIVCAAYD-AILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVN---HKNIIGL 88
Query: 346 VLEFMPNGSLEKW--LYSHNYFLDI-----------LERLNIMI-DVGSALEYLHNGHSS 391
+ F P SLE++ +Y +D ER++ ++ + +++LH S
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLH----S 144
Query: 392 VHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGI 451
IIH DLKP+NI++ + + DFG+ + G S T + T Y APE L
Sbjct: 145 AGIIHRDLKPSNIVVKSDATLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVILGMG 201
Query: 452 VSAKCDVYSYGVLLME 467
D++S G ++ E
Sbjct: 202 YKENVDIWSVGCIMGE 217
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 97/219 (44%), Gaps = 29/219 (13%)
Query: 286 GSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKAL 345
GS +G + D AI N+ +++ R F ++ R R L+K ++ + + L
Sbjct: 27 GSGAQGIVCAAYD-AILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN---HKNIIGL 82
Query: 346 VLEFMPNGSLEKW--LYSHNYFLDI-----------LERLNIMI-DVGSALEYLHNGHSS 391
+ F P SLE++ +Y +D ER++ ++ + +++LH S
Sbjct: 83 LNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH----S 138
Query: 392 VHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGI 451
IIH DLKP+NI++ + + DFG+ + G S T + T Y APE L
Sbjct: 139 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVILGMG 195
Query: 452 VSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVK 490
D++S G ++ E K +F G + +W K
Sbjct: 196 YKENVDLWSVGCIMGEMVCHKI----LFPGRDYIDQWNK 230
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 87/217 (40%), Gaps = 38/217 (17%)
Query: 272 DEFNECNLLGTSSFGSVYKGTISD-GTDVAIKV-----FNLQLERAFRSFDSECEVLRNV 325
D + C ++G F V + + G A+K+ F + E + +
Sbjct: 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 326 RHRNLIKILSSYSNPDFKALVLEFMPNGSL---------EKWLYSH----NYFLDILERL 372
+H +++++L +YS+ +V EFM L ++YS +Y ILE
Sbjct: 84 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILE-- 141
Query: 373 NIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILL---DENMVAHVSDFGIYKLLGEGEDS 429
AL Y H+ +IIH D+KP +LL + + + FG+ LGE
Sbjct: 142 --------ALRYCHDN----NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGES--G 187
Query: 430 VRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLM 466
+ + T +MAPE DV+ GV+L
Sbjct: 188 LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILF 224
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 73/161 (45%), Gaps = 12/161 (7%)
Query: 318 ECEVLRNVRHRNLIKILSSYSNPDFKAL----VLEFMPNGSLEKWLYSHNYFLDILERLN 373
E ++L RH N+I I P + + ++ + L K L + + D +
Sbjct: 91 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHI--CY 148
Query: 374 IMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVR-Q 432
+ + L+Y+H S +++H DLKP+N+LL+ + DFG+ ++ D
Sbjct: 149 FLYQILRGLKYIH----SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFL 204
Query: 433 TMTMATIGYMAPEYGLEGIVSAKC-DVYSYGVLLMETFTRK 472
T +AT Y APE L K D++S G +L E + +
Sbjct: 205 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 80/194 (41%), Gaps = 20/194 (10%)
Query: 266 DIQRATDEFNEC-----------NLLGTSSFGSVYKGTISDGTDVAIKVFNLQL--ERAF 312
D +A+ NEC +G+ V++ AIK NL+ +
Sbjct: 39 DDDKASSSANECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTL 98
Query: 313 RSFDSECEVLRNVR-HRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILER 371
S+ +E L ++ H + I L Y D ++ N L WL +D ER
Sbjct: 99 DSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKK-SIDPWER 157
Query: 372 LNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVR 431
+ ++ A+ +H H I+H DLKP N L+ + M+ + DFGI + SV
Sbjct: 158 KSYWKNMLEAVHTIHQ-HG---IVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVV 212
Query: 432 QTMTMATIGYMAPE 445
+ + T+ YM PE
Sbjct: 213 KDSQVGTVNYMPPE 226
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 97/240 (40%), Gaps = 33/240 (13%)
Query: 266 DIQRATDEFNEC-----------NLLGTSSFGSVYKGTISDGTDVAIKVFNLQL--ERAF 312
D +A+ NEC +G+ V++ AIK NL+ +
Sbjct: 39 DDDKASSSANECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTL 98
Query: 313 RSFDSECEVLRNVR-HRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILER 371
S+ +E L ++ H + I L Y D ++ N L WL +D ER
Sbjct: 99 DSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKK-SIDPWER 157
Query: 372 LNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVR 431
+ ++ A+ +H H I+H DLKP N L+ + M+ + DFGI + SV
Sbjct: 158 KSYWKNMLEAVHTIHQ-HG---IVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVV 212
Query: 432 QTMTMATIGYMAPEYGLEGIVSAK------------CDVYSYGVLLMETFTRKRPTDEMF 479
+ + T+ YM PE ++ + S++ DV+S G +L K P ++
Sbjct: 213 KDSQVGTVNYMPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 271
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 89/188 (47%), Gaps = 25/188 (13%)
Query: 309 ERAFRSFDSECEVLRNVRHRNLIKILSSYSNP----DFK--ALVLEFMPNGSLEKWLYSH 362
+RA+R E +++ V H+N+I +L+ ++ +F+ LV+E M + +L + +
Sbjct: 106 KRAYR----ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME 160
Query: 363 NYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKL 422
LD ++ + +++LH S IIH DLKP+NI++ + + DFG+ +
Sbjct: 161 ---LDHERMSYLLYQMLCGIKHLH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLART 213
Query: 423 LGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGE 482
G S T + T Y APE L D++S G ++ E K +F G
Sbjct: 214 AGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGR 266
Query: 483 MSLRRWVK 490
+ +W K
Sbjct: 267 DYIDQWNK 274
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 89/196 (45%), Gaps = 25/196 (12%)
Query: 286 GSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKAL 345
GS +G + D AI N+ +++ R F ++ R R L+K ++ + + L
Sbjct: 33 GSGAQGIVCAAYD-AILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN---HKNIIGL 88
Query: 346 VLEFMPNGSLEKW--LYSHNYFLDI-----------LERLNIMI-DVGSALEYLHNGHSS 391
+ F P SLE++ +Y +D ER++ ++ + +++LH S
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH----S 144
Query: 392 VHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGI 451
IIH DLKP+NI++ + + DFG+ + G S T + T Y APE L
Sbjct: 145 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPEVVTRYYRAPEVILGMG 201
Query: 452 VSAKCDVYSYGVLLME 467
D++S G ++ E
Sbjct: 202 YKENVDIWSVGCIMGE 217
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 89/188 (47%), Gaps = 25/188 (13%)
Query: 309 ERAFRSFDSECEVLRNVRHRNLIKILSSYSNP----DFK--ALVLEFMPNGSLEKWLYSH 362
+RA+R E +++ V H+N+I +L+ ++ +F+ LV+E M + +L + +
Sbjct: 68 KRAYR----ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME 122
Query: 363 NYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKL 422
LD ++ + +++LH S IIH DLKP+NI++ + + DFG+ +
Sbjct: 123 ---LDHERMSYLLYQMLCGIKHLH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLART 175
Query: 423 LGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGE 482
G S T + T Y APE L D++S G ++ E K +F G
Sbjct: 176 AGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGR 228
Query: 483 MSLRRWVK 490
+ +W K
Sbjct: 229 DYIDQWNK 236
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 89/188 (47%), Gaps = 25/188 (13%)
Query: 309 ERAFRSFDSECEVLRNVRHRNLIKILSSYSNP----DFK--ALVLEFMPNGSLEKWLYSH 362
+RA+R E +++ V H+N+I +L+ ++ +F+ LV+E M + +L + +
Sbjct: 67 KRAYR----ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME 121
Query: 363 NYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKL 422
LD ++ + +++LH S IIH DLKP+NI++ + + DFG+ +
Sbjct: 122 ---LDHERMSYLLYQMLCGIKHLH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLART 174
Query: 423 LGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGE 482
G S T + T Y APE L D++S G ++ E K +F G
Sbjct: 175 AGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGR 227
Query: 483 MSLRRWVK 490
+ +W K
Sbjct: 228 DYIDQWNK 235
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 109/262 (41%), Gaps = 41/262 (15%)
Query: 300 AIKVFNLQL--ERAFRSFDSECEVLRNVR-HRNLIKILSSYSNPDFKALVLEFMPNGSLE 356
AIK NL+ + S+ +E L ++ H + I L Y D ++ N L
Sbjct: 40 AIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLN 99
Query: 357 KWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSD 416
WL +D ER + ++ A+ +H H I+H DLKP N L+ + M+ + D
Sbjct: 100 SWLKKKK-SIDPWERKSYWKNMLEAVHTIHQ-HG---IVHSDLKPANFLIVDGMLKLI-D 153
Query: 417 FGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAK------------CDVYSYGVL 464
FGI + SV + + T+ YM PE ++ + S++ DV+S G +
Sbjct: 154 FGIANQMQPDTTSVVKDSQVGTVNYMPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCI 212
Query: 465 LMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMD 524
L K P ++ I ++S L ++D N E F D +
Sbjct: 213 LYYMTYGKTPFQQI-INQIS-----------KLHAIIDPN---HEIEFP---DIPEKDLQ 254
Query: 525 FALDCCME-SPDMRINMTDAAA 545
L CC++ P RI++ + A
Sbjct: 255 DVLKCCLKRDPKQRISIPELLA 276
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 90/195 (46%), Gaps = 12/195 (6%)
Query: 280 LGTSSFGSVYKGTISDGTD--VAIKVFNLQLER-AFRSFDSECEVLRNVRHRNLIKILSS 336
LG ++ +VYKG S TD VA+K L+ E A + E +L++++H N++ +
Sbjct: 10 LGEGTYATVYKGK-SKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 68
Query: 337 YSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIH 396
LV E++ + L+++L +++ + + L Y H ++H
Sbjct: 69 IHTEKSLTLVFEYL-DKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQK----VLH 123
Query: 397 CDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGI-VSAK 455
DLKP N+L++E ++DFG+ + + + + T+ Y P+ L S +
Sbjct: 124 RDLKPQNLLINERGELKLADFGLAR--AKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQ 181
Query: 456 CDVYSYGVLLMETFT 470
D++ G + E T
Sbjct: 182 IDMWGVGCIFYEMAT 196
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 89/188 (47%), Gaps = 25/188 (13%)
Query: 309 ERAFRSFDSECEVLRNVRHRNLIKILSSYSNP----DFK--ALVLEFMPNGSLEKWLYSH 362
+RA+R E +++ V H+N+I +L+ ++ +F+ LV+E M + +L + +
Sbjct: 69 KRAYR----ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME 123
Query: 363 NYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKL 422
LD ++ + +++LH S IIH DLKP+NI++ + + DFG+ +
Sbjct: 124 ---LDHERMSYLLYQMLCGIKHLH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLART 176
Query: 423 LGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGE 482
G S T + T Y APE L D++S G ++ E K +F G
Sbjct: 177 AGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGR 229
Query: 483 MSLRRWVK 490
+ +W K
Sbjct: 230 DYIDQWNK 237
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 89/188 (47%), Gaps = 25/188 (13%)
Query: 309 ERAFRSFDSECEVLRNVRHRNLIKILSSYSNP----DFK--ALVLEFMPNGSLEKWLYSH 362
+RA+R E +++ V H+N+I +L+ ++ +F+ LV+E M + +L + +
Sbjct: 62 KRAYR----ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME 116
Query: 363 NYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKL 422
LD ++ + +++LH S IIH DLKP+NI++ + + DFG+ +
Sbjct: 117 ---LDHERMSYLLYQMLCGIKHLH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLART 169
Query: 423 LGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGE 482
G S T + T Y APE L D++S G ++ E K +F G
Sbjct: 170 AGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGR 222
Query: 483 MSLRRWVK 490
+ +W K
Sbjct: 223 DYIDQWNK 230
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 89/188 (47%), Gaps = 25/188 (13%)
Query: 309 ERAFRSFDSECEVLRNVRHRNLIKILSSYSNP----DFK--ALVLEFMPNGSLEKWLYSH 362
+RA+R E +++ V H+N+I +L+ ++ +F+ LV+E M + +L + +
Sbjct: 61 KRAYR----ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME 115
Query: 363 NYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKL 422
LD ++ + +++LH S IIH DLKP+NI++ + + DFG+ +
Sbjct: 116 ---LDHERMSYLLYQMLCGIKHLH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLART 168
Query: 423 LGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGE 482
G S T + T Y APE L D++S G ++ E K +F G
Sbjct: 169 AGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGR 221
Query: 483 MSLRRWVK 490
+ +W K
Sbjct: 222 DYIDQWNK 229
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 89/188 (47%), Gaps = 25/188 (13%)
Query: 309 ERAFRSFDSECEVLRNVRHRNLIKILSSYSNP----DFK--ALVLEFMPNGSLEKWLYSH 362
+RA+R E +++ V H+N+I +L+ ++ +F+ LV+E M + +L + +
Sbjct: 62 KRAYR----ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME 116
Query: 363 NYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKL 422
LD ++ + +++LH S IIH DLKP+NI++ + + DFG+ +
Sbjct: 117 ---LDHERMSYLLYQMLCGIKHLH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLART 169
Query: 423 LGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGE 482
G S T + T Y APE L D++S G ++ E K +F G
Sbjct: 170 AGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGR 222
Query: 483 MSLRRWVK 490
+ +W K
Sbjct: 223 DYIDQWNK 230
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 89/188 (47%), Gaps = 25/188 (13%)
Query: 309 ERAFRSFDSECEVLRNVRHRNLIKILSSYSNP----DFK--ALVLEFMPNGSLEKWLYSH 362
+RA+R E +++ V H+N+I +L+ ++ +F+ LV+E M + +L + +
Sbjct: 69 KRAYR----ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME 123
Query: 363 NYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKL 422
LD ++ + +++LH S IIH DLKP+NI++ + + DFG+ +
Sbjct: 124 ---LDHERMSYLLYQMLCGIKHLH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLART 176
Query: 423 LGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGE 482
G S T + T Y APE L D++S G ++ E K +F G
Sbjct: 177 AGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGR 229
Query: 483 MSLRRWVK 490
+ +W K
Sbjct: 230 DYIDQWNK 237
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 87/207 (42%), Gaps = 17/207 (8%)
Query: 265 LDIQRATDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRN 324
L I +D + +G+ +FG ++ + + E+ + E R+
Sbjct: 12 LPIMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINHRS 71
Query: 325 VRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEY 384
+RH N+++ P A+V+E+ G L + + + F + R + S + Y
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARF-FFQQLISGVSY 130
Query: 385 LHNGHSSVHIIHCDLKPTNILLDENMVAH--VSDFGIYKLLGEGEDSVRQTMTMATIG-- 440
H ++ + H DLK N LLD + + DFG K SV + +T+G
Sbjct: 131 CH----AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSK------SSVLHSQPKSTVGTP 180
Query: 441 -YMAPEYGLEGIVSAK-CDVYSYGVLL 465
Y+APE L+ K DV+S GV L
Sbjct: 181 AYIAPEVLLKKEYDGKVADVWSCGVTL 207
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 89/188 (47%), Gaps = 25/188 (13%)
Query: 309 ERAFRSFDSECEVLRNVRHRNLIKILSSYSNP----DFK--ALVLEFMPNGSLEKWLYSH 362
+RA+R E +++ V H+N+I +L+ ++ +F+ LV+E M + +L + +
Sbjct: 68 KRAYR----ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME 122
Query: 363 NYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKL 422
LD ++ + +++LH S IIH DLKP+NI++ + + DFG+ +
Sbjct: 123 ---LDHERMSYLLYQMLCGIKHLH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLART 175
Query: 423 LGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGE 482
G S T + T Y APE L D++S G ++ E K +F G
Sbjct: 176 AGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGR 228
Query: 483 MSLRRWVK 490
+ +W K
Sbjct: 229 DYIDQWNK 236
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 96/219 (43%), Gaps = 29/219 (13%)
Query: 286 GSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKAL 345
GS +G + D AI N+ +++ R F ++ R R L+K ++ + + L
Sbjct: 33 GSGAQGIVCAAYD-AILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN---HKNIIGL 88
Query: 346 VLEFMPNGSLEKW--LYSHNYFLDI-----------LERLNIMI-DVGSALEYLHNGHSS 391
+ F P SLE++ +Y +D ER++ ++ + +++LH S
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH----S 144
Query: 392 VHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGI 451
IIH DLKP+NI++ + + DFG+ + G S + T Y APE L
Sbjct: 145 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMEPEVVTRYYRAPEVILGMG 201
Query: 452 VSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVK 490
D++S G ++ E K +F G + +W K
Sbjct: 202 YKENVDIWSVGCIMGEMVCHKI----LFPGRDYIDQWNK 236
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 109/262 (41%), Gaps = 41/262 (15%)
Query: 300 AIKVFNLQL--ERAFRSFDSECEVLRNVR-HRNLIKILSSYSNPDFKALVLEFMPNGSLE 356
AIK NL+ + S+ +E L ++ H + I L Y D ++ N L
Sbjct: 36 AIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLN 95
Query: 357 KWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSD 416
WL +D ER + ++ A+ +H H I+H DLKP N L+ + M+ + D
Sbjct: 96 SWLKKKK-SIDPWERKSYWKNMLEAVHTIHQ-HG---IVHSDLKPANFLIVDGMLKLI-D 149
Query: 417 FGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAK------------CDVYSYGVL 464
FGI + SV + + T+ YM PE ++ + S++ DV+S G +
Sbjct: 150 FGIANQMQPDTTSVVKDSQVGTVNYMPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCI 208
Query: 465 LMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMD 524
L K P ++ I ++S L ++D N E F D +
Sbjct: 209 LYYMTYGKTPFQQI-INQIS-----------KLHAIIDPN---HEIEFP---DIPEKDLQ 250
Query: 525 FALDCCME-SPDMRINMTDAAA 545
L CC++ P RI++ + A
Sbjct: 251 DVLKCCLKRDPKQRISIPELLA 272
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 8/159 (5%)
Query: 318 ECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYS--HNYFLDILERLNIM 375
E ++L RH N+I I P + + ++ +E LY L +
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 134
Query: 376 IDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVR-QTM 434
+ L+Y+H S +++H DLKP+N+LL+ + DFG+ ++ D
Sbjct: 135 YQILRGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXE 190
Query: 435 TMATIGYMAPEYGLEGIVSAKC-DVYSYGVLLMETFTRK 472
+AT Y APE L K D++S G +L E + +
Sbjct: 191 XVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 8/159 (5%)
Query: 318 ECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYS--HNYFLDILERLNIM 375
E ++L RH N+I I P + + ++ +E LY L +
Sbjct: 76 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 135
Query: 376 IDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVR-QTM 434
+ L+Y+H S +++H DLKP+N+LL+ + DFG+ ++ D
Sbjct: 136 YQILRGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXE 191
Query: 435 TMATIGYMAPEYGLEGIVSAKC-DVYSYGVLLMETFTRK 472
+AT Y APE L K D++S G +L E + +
Sbjct: 192 XVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 91/225 (40%), Gaps = 20/225 (8%)
Query: 266 DIQRATDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNV 325
D + TD FN +LG SFG V GTD V L+ + + D EC ++
Sbjct: 15 DRMKLTD-FNFLMVLGKGSFGKVMLSE-RKGTDELYAVKILKKDVVIQDDDVECTMVEKR 72
Query: 326 ------RHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVG 379
+ L ++ S + D V+E++ G L + F + + ++
Sbjct: 73 VLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEP-HAVFYAAEIA 131
Query: 380 SALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATI 439
L +L S II+ DLK N++LD ++DFG+ K D V T
Sbjct: 132 IGLFFLQ----SKGIIYRDLKLDNVMLDSEGHIKIADFGMCK--ENIWDGVTTKXFCGTP 185
Query: 440 GYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRP-----TDEMF 479
Y+APE D +++GVLL E + P DE+F
Sbjct: 186 DYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELF 230
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 109/262 (41%), Gaps = 41/262 (15%)
Query: 300 AIKVFNLQL--ERAFRSFDSECEVLRNVR-HRNLIKILSSYSNPDFKALVLEFMPNGSLE 356
AIK NL+ + S+ +E L ++ H + I L Y D ++ N L
Sbjct: 37 AIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLN 96
Query: 357 KWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSD 416
WL +D ER + ++ A+ +H H I+H DLKP N L+ + M+ + D
Sbjct: 97 SWLKKKK-SIDPWERKSYWKNMLEAVHTIHQ-HG---IVHSDLKPANFLIVDGMLKLI-D 150
Query: 417 FGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAK------------CDVYSYGVL 464
FGI + SV + + T+ YM PE ++ + S++ DV+S G +
Sbjct: 151 FGIANQMQPDTTSVVKDSQVGTVNYMPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCI 209
Query: 465 LMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMD 524
L K P ++ I ++S L ++D N E F D +
Sbjct: 210 LYYMTYGKTPFQQI-INQIS-----------KLHAIIDPN---HEIEFP---DIPEKDLQ 251
Query: 525 FALDCCME-SPDMRINMTDAAA 545
L CC++ P RI++ + A
Sbjct: 252 DVLKCCLKRDPKQRISIPELLA 273
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 89/196 (45%), Gaps = 25/196 (12%)
Query: 286 GSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKAL 345
GS +G + D AI N+ +++ R F ++ R R L+K ++ + + L
Sbjct: 33 GSGAQGIVCAAYD-AILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN---HKNIIGL 88
Query: 346 VLEFMPNGSLEKW--LYSHNYFLDI-----------LERLNIMI-DVGSALEYLHNGHSS 391
+ F P SLE++ +Y +D ER++ ++ + +++LH S
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH----S 144
Query: 392 VHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGI 451
IIH DLKP+NI++ + + DFG+ + G S T + T Y APE L
Sbjct: 145 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVILGMG 201
Query: 452 VSAKCDVYSYGVLLME 467
D++S G ++ E
Sbjct: 202 YKENVDIWSVGCIMGE 217
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 89/197 (45%), Gaps = 25/197 (12%)
Query: 285 FGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKA 344
GS +G + D AI N+ +++ R F ++ R R L+K ++ + +
Sbjct: 33 IGSGAQGIVCAAYD-AILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN---HKNIIG 88
Query: 345 LVLEFMPNGSLEKW--LYSHNYFLDI-----------LERLNIMI-DVGSALEYLHNGHS 390
L+ F P SLE++ +Y +D ER++ ++ + +++LH
Sbjct: 89 LLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---- 144
Query: 391 SVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEG 450
S IIH DLKP+NI++ + + DFG+ + G S T + T Y APE L
Sbjct: 145 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVILGM 201
Query: 451 IVSAKCDVYSYGVLLME 467
D++S G ++ E
Sbjct: 202 GYKENVDIWSVGCIMGE 218
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 87/207 (42%), Gaps = 17/207 (8%)
Query: 265 LDIQRATDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRN 324
L I +D + +G+ +FG ++ + + E+ + E R+
Sbjct: 11 LPIMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRS 70
Query: 325 VRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEY 384
+RH N+++ P A+V+E+ G L + + + F + R + S + Y
Sbjct: 71 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARF-FFQQLISGVSY 129
Query: 385 LHNGHSSVHIIHCDLKPTNILLDENMVAH--VSDFGIYKLLGEGEDSVRQTMTMATIG-- 440
H ++ + H DLK N LLD + + DFG K SV + +T+G
Sbjct: 130 CH----AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSK------SSVLHSQPKSTVGTP 179
Query: 441 -YMAPEYGLEGIVSAK-CDVYSYGVLL 465
Y+APE L+ K DV+S GV L
Sbjct: 180 AYIAPEVLLKKEYDGKVADVWSCGVTL 206
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 91/225 (40%), Gaps = 20/225 (8%)
Query: 266 DIQRATDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNV 325
D + TD FN +LG SFG V GTD V L+ + + D EC ++
Sbjct: 336 DRMKLTD-FNFLMVLGKGSFGKVMLSE-RKGTDELYAVKILKKDVVIQDDDVECTMVEKR 393
Query: 326 ------RHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVG 379
+ L ++ S + D V+E++ G L + F + + ++
Sbjct: 394 VLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEP-HAVFYAAEIA 452
Query: 380 SALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATI 439
L +L S II+ DLK N++LD ++DFG+ K D V T
Sbjct: 453 IGLFFLQ----SKGIIYRDLKLDNVMLDSEGHIKIADFGMCK--ENIWDGVTTKXFCGTP 506
Query: 440 GYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRP-----TDEMF 479
Y+APE D +++GVLL E + P DE+F
Sbjct: 507 DYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELF 551
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 91/213 (42%), Gaps = 17/213 (7%)
Query: 280 LGTSSFGSVYK-GTISDGTDVAIKVFNLQLERAFRSFD-SECEVLRNVRHRNLIKILSSY 337
LG SFG V++ G A+K L++ FR + C L + R ++ + +
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVRLEV---FRVEELVACAGLSSPR---IVPLYGAV 133
Query: 338 SNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHC 397
+ + +E + GSL + + + L + +G ALE L H+ I+H
Sbjct: 134 REGPWVNIFMELLEGGSLGQLIKQ----MGCLPEDRALYYLGQALEGLEYLHTR-RILHG 188
Query: 398 DLKPTNILLD-ENMVAHVSDFGIYKLL---GEGEDSVRQTMTMATIGYMAPEYGLEGIVS 453
D+K N+LL + A + DFG L G G+ + T +MAPE +
Sbjct: 189 DVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCD 248
Query: 454 AKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLR 486
AK D++S +++ P + F G + L+
Sbjct: 249 AKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLK 281
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 109/262 (41%), Gaps = 41/262 (15%)
Query: 300 AIKVFNLQL--ERAFRSFDSECEVLRNVR-HRNLIKILSSYSNPDFKALVLEFMPNGSLE 356
AIK NL+ + S+ +E L ++ H + I L Y D ++ N L
Sbjct: 56 AIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLN 115
Query: 357 KWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSD 416
WL +D ER + ++ A+ +H H I+H DLKP N L+ + M+ + D
Sbjct: 116 SWLKKKK-SIDPWERKSYWKNMLEAVHTIHQ-HG---IVHSDLKPANFLIVDGMLKLI-D 169
Query: 417 FGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAK------------CDVYSYGVL 464
FGI + SV + + T+ YM PE ++ + S++ DV+S G +
Sbjct: 170 FGIANQMQPDTTSVVKDSQVGTVNYMPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCI 228
Query: 465 LMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMD 524
L K P ++ I ++S L ++D N E F D +
Sbjct: 229 LYYMTYGKTPFQQI-INQIS-----------KLHAIIDPN---HEIEFP---DIPEKDLQ 270
Query: 525 FALDCCME-SPDMRINMTDAAA 545
L CC++ P RI++ + A
Sbjct: 271 DVLKCCLKRDPKQRISIPELLA 292
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 89/196 (45%), Gaps = 25/196 (12%)
Query: 286 GSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKAL 345
GS +G + D AI N+ +++ R F ++ R R L+K ++ + + L
Sbjct: 33 GSGAQGIVCAAYD-AILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN---HKNIIGL 88
Query: 346 VLEFMPNGSLEKW--LYSHNYFLDI-----------LERLNIMI-DVGSALEYLHNGHSS 391
+ F P SLE++ +Y +D ER++ ++ + +++LH S
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLH----S 144
Query: 392 VHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGI 451
IIH DLKP+NI++ + + DFG+ + G S T + T Y APE L
Sbjct: 145 AGIIHRDLKPSNIVVKSDATLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVILGMG 201
Query: 452 VSAKCDVYSYGVLLME 467
D++S G ++ E
Sbjct: 202 YKENVDIWSVGCIMGE 217
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 89/196 (45%), Gaps = 25/196 (12%)
Query: 286 GSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKAL 345
GS +G + D AI N+ +++ R F ++ R R L+K ++ + + L
Sbjct: 33 GSGAQGIVCAAYD-AILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN---HKNIIGL 88
Query: 346 VLEFMPNGSLEKW--LYSHNYFLDI-----------LERLNIMI-DVGSALEYLHNGHSS 391
+ F P SLE++ +Y +D ER++ ++ + +++LH S
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH----S 144
Query: 392 VHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGI 451
IIH DLKP+NI++ + + DFG+ + G S T + T Y APE L
Sbjct: 145 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVILGMG 201
Query: 452 VSAKCDVYSYGVLLME 467
D++S G ++ E
Sbjct: 202 YKENVDIWSVGCIMGE 217
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 86/211 (40%), Gaps = 25/211 (11%)
Query: 279 LLGTSSFGSVYKGTISDGTDVAIK-VFNLQ--------LERAF--RSFDSECEVLRNVRH 327
+ + S+G+V G S+G VAIK VFN L +F + E +L + H
Sbjct: 29 FISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHH 88
Query: 328 RNLI---KILSSYSNPDFKALVL--EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSAL 382
N++ I + P L L E M L + ++ + M + L
Sbjct: 89 PNILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVIHDQRIVISPQHIQYFMYHILLGL 147
Query: 383 EYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYM 442
LH ++H DL P NILL +N + DF + + E +T + Y
Sbjct: 148 HVLHEAG----VVHRDLHPGNILLADNNDITICDFNLAR---EDTADANKTHYVTHRWYR 200
Query: 443 APEYGLEGIVSAK-CDVYSYGVLLMETFTRK 472
APE ++ K D++S G ++ E F RK
Sbjct: 201 APELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 89/196 (45%), Gaps = 25/196 (12%)
Query: 286 GSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKAL 345
GS +G + D AI N+ +++ R F ++ R R L+K ++ + + L
Sbjct: 33 GSGAQGIVCAAYD-AILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN---HKNIIGL 88
Query: 346 VLEFMPNGSLEKW--LYSHNYFLDI-----------LERLNIMI-DVGSALEYLHNGHSS 391
+ F P SLE++ +Y +D ER++ ++ + +++LH S
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLH----S 144
Query: 392 VHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGI 451
IIH DLKP+NI++ + + DFG+ + G S T + T Y APE L
Sbjct: 145 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVILGMG 201
Query: 452 VSAKCDVYSYGVLLME 467
D++S G ++ E
Sbjct: 202 YKENVDIWSVGCIMGE 217
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 93/219 (42%), Gaps = 28/219 (12%)
Query: 281 GTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKI----LSS 336
G S+ + +G + DG A+K ++ E ++ R H N++++ L
Sbjct: 40 GGFSYVDLVEG-LHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRE 98
Query: 337 YSNPDFKALVLEFMPNGSLEKW-----LYSHNYFLDILERLNIMIDVGSALEYLH-NGHS 390
L+L F G+L W L FL + L +++ + LE +H G++
Sbjct: 99 RGAKHEAWLLLPFFKRGTL--WNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYA 156
Query: 391 SVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMA-------TIGYMA 443
H DLKPTNILL + + D G + RQ +T+ TI Y A
Sbjct: 157 -----HRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRA 211
Query: 444 PE-YGLEG--IVSAKCDVYSYGVLLMETFTRKRPTDEMF 479
PE + ++ ++ + DV+S G +L + P D +F
Sbjct: 212 PELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVF 250
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 86/211 (40%), Gaps = 25/211 (11%)
Query: 279 LLGTSSFGSVYKGTISDGTDVAIK-VFNLQ--------LERAF--RSFDSECEVLRNVRH 327
+ + S+G+V G S+G VAIK VFN L +F + E +L + H
Sbjct: 29 FISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHH 88
Query: 328 RNLI---KILSSYSNPDFKALVL--EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSAL 382
N++ I + P L L E M L + ++ + M + L
Sbjct: 89 PNILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVIHDQRIVISPQHIQYFMYHILLGL 147
Query: 383 EYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYM 442
LH ++H DL P NILL +N + DF + + E +T + Y
Sbjct: 148 HVLHEAG----VVHRDLHPGNILLADNNDITICDFNLAR---EDTADANKTHYVTHRWYR 200
Query: 443 APEYGLEGIVSAK-CDVYSYGVLLMETFTRK 472
APE ++ K D++S G ++ E F RK
Sbjct: 201 APELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 86/207 (41%), Gaps = 17/207 (8%)
Query: 265 LDIQRATDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRN 324
L I +D + +G +FG ++ + + E+ + E R+
Sbjct: 12 LPIMHDSDRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRS 71
Query: 325 VRHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEY 384
+RH N+++ P A+V+E+ G L + + + F + R + S + Y
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARF-FFQQLISGVSY 130
Query: 385 LHNGHSSVHIIHCDLKPTNILLDENMVAH--VSDFGIYKLLGEGEDSVRQTMTMATIG-- 440
H ++ + H DLK N LLD + ++DFG K SV + + +G
Sbjct: 131 AH----AMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKA------SVLHSQPKSAVGTP 180
Query: 441 -YMAPEYGLEGIVSAK-CDVYSYGVLL 465
Y+APE L+ K DV+S GV L
Sbjct: 181 AYIAPEVLLKKEYDGKVADVWSCGVTL 207
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 14/100 (14%)
Query: 370 ERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDE---NMVAHVSDFGIYKLLGEG 426
E I +G A++YLH S++I H D+KP N+L N + ++DFG K
Sbjct: 162 EASEIXKSIGEAIQYLH----SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----- 212
Query: 427 EDSVRQTMTMA--TIGYMAPEYGLEGIVSAKCDVYSYGVL 464
E + ++T T Y+APE CD +S GV+
Sbjct: 213 ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDXWSLGVI 252
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 86/192 (44%), Gaps = 34/192 (17%)
Query: 327 HRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILE------RLNIMIDVGS 380
H N+I+ S + F + LE + N +L+ + S N + L+ ++++ + S
Sbjct: 68 HPNVIRYYCSETTDRFLYIALE-LCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIAS 126
Query: 381 ALEYLHNGHSSVHIIHCDLKPTNILLD-------------ENMVAHVSDFGIYKLLGEGE 427
+ +LH S+ IIH DLKP NIL+ EN+ +SDFG+ K L G+
Sbjct: 127 GVAHLH----SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQ 182
Query: 428 DSVRQTMT--MATIGYMAPEYGLEG-------IVSAKCDVYSYGVLLMETFTR-KRPTDE 477
R + T G+ APE E ++ D++S G + ++ K P +
Sbjct: 183 XXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD 242
Query: 478 MFIGEMSLRRWV 489
+ E ++ R +
Sbjct: 243 KYSRESNIIRGI 254
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 96/219 (43%), Gaps = 29/219 (13%)
Query: 286 GSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKAL 345
GS +G + D AI N+ +++ R F ++ R R L+K ++ + + L
Sbjct: 33 GSGAQGIVCAAYD-AILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN---HKNIIGL 88
Query: 346 VLEFMPNGSLEKW--LYSHNYFLDI-----------LERLNIMI-DVGSALEYLHNGHSS 391
+ F P SLE++ +Y +D ER++ ++ + +++LH S
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH----S 144
Query: 392 VHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGI 451
IIH DLKP+NI++ + + DFG+ + G S + T Y APE L
Sbjct: 145 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMEPEVVTRYYRAPEVILGMG 201
Query: 452 VSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVK 490
D++S G ++ E K +F G + +W K
Sbjct: 202 YKENVDLWSVGCIMGEMVCHKI----LFPGRDYIDQWNK 236
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 98/233 (42%), Gaps = 26/233 (11%)
Query: 279 LLGTSSFGSVYKGT-ISDGTDVAIKVFNL-------QLERAFRSFDSECEVLRNVRH--R 328
LLG+ FGSVY G +SD VAIK +L R E +L+ V
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFS 73
Query: 329 NLIKILSSYSNPDFKALVLEFM-PNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHN 387
+I++L + PD L+LE M P L ++ + L R + V A+ + HN
Sbjct: 74 GVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELAR-SFFWQVLEAVRHCHN 132
Query: 388 GHSSVHIIHCDLKPTNILLDENMVA-HVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEY 446
++H D+K NIL+D N + DFG LL +D+V + Y PE+
Sbjct: 133 ----CGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRV-YSPPEW 184
Query: 447 -GLEGIVSAKCDVYSYGVLLMETFTRKRP---TDEMFIGEMSLRRWVKESLPH 495
V+S G+LL + P +E+ G++ R+ V H
Sbjct: 185 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQH 237
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 96/240 (40%), Gaps = 33/240 (13%)
Query: 266 DIQRATDEFNEC-----------NLLGTSSFGSVYKGTISDGTDVAIKVFNLQL--ERAF 312
D +A+ NEC +G+ V++ AIK NL+ +
Sbjct: 39 DDDKASSSANECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTL 98
Query: 313 RSFDSECEVLRNVR-HRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILER 371
S+ +E L ++ H + I L Y D ++ N L WL +D ER
Sbjct: 99 DSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKK-SIDPWER 157
Query: 372 LNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVR 431
+ ++ A+ +H H I+H DLKP N L+ + M+ + DFGI + SV
Sbjct: 158 KSYWKNMLEAVHTIHQ-HG---IVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVV 212
Query: 432 QTMTMATIGYMAPEYGLEGIVSAK------------CDVYSYGVLLMETFTRKRPTDEMF 479
+ + + YM PE ++ + S++ DV+S G +L K P ++
Sbjct: 213 KDSQVGAVNYMPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 271
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 91/213 (42%), Gaps = 17/213 (7%)
Query: 280 LGTSSFGSVYK-GTISDGTDVAIKVFNLQLERAFRSFD-SECEVLRNVRHRNLIKILSSY 337
+G SFG V++ G A+K L++ FR + C L + R ++ + +
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEV---FRVEELVACAGLSSPR---IVPLYGAV 119
Query: 338 SNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHC 397
+ + +E + GSL + + + L + +G ALE L H+ I+H
Sbjct: 120 REGPWVNIFMELLEGGSLGQLIKQ----MGCLPEDRALYYLGQALEGLEYLHTR-RILHG 174
Query: 398 DLKPTNILLD-ENMVAHVSDFGIYKLL---GEGEDSVRQTMTMATIGYMAPEYGLEGIVS 453
D+K N+LL + A + DFG L G G+ + T +MAPE +
Sbjct: 175 DVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCD 234
Query: 454 AKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLR 486
AK D++S +++ P + F G + L+
Sbjct: 235 AKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLK 267
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 90/184 (48%), Gaps = 27/184 (14%)
Query: 296 GTDVAIKVFNLQLE------RAFRSFDSECEVLRNVRHRNLIKILSSYSNP----DFK-- 343
G +VA+K + + RA+R E +L+ V H+N+I +L+ ++ +F+
Sbjct: 49 GINVAVKKLSRPFQNQTHAKRAYR----ELVLLKCVNHKNIISLLNVFTPQKTLEEFQDV 104
Query: 344 ALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTN 403
LV+E M + +L + ++ LD ++ + +++LH S IIH DLKP+N
Sbjct: 105 YLVMELM-DANLCQVIHME---LDHERMSYLLYQMLCGIKHLH----SAGIIHRDLKPSN 156
Query: 404 ILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGV 463
I++ + + DFG+ + + T + T Y APE L +A D++S G
Sbjct: 157 IVVKSDCTLKILDFGLART---ACTNFMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGC 213
Query: 464 LLME 467
++ E
Sbjct: 214 IMGE 217
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 91/213 (42%), Gaps = 17/213 (7%)
Query: 280 LGTSSFGSVYK-GTISDGTDVAIKVFNLQLERAFRSFD-SECEVLRNVRHRNLIKILSSY 337
+G SFG V++ G A+K L++ FR + C L + R ++ + +
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEV---FRVEELVACAGLSSPR---IVPLYGAV 135
Query: 338 SNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHC 397
+ + +E + GSL + + + L + +G ALE L H+ I+H
Sbjct: 136 REGPWVNIFMELLEGGSLGQLIKQ----MGCLPEDRALYYLGQALEGLEYLHTR-RILHG 190
Query: 398 DLKPTNILLD-ENMVAHVSDFGIYKLL---GEGEDSVRQTMTMATIGYMAPEYGLEGIVS 453
D+K N+LL + A + DFG L G G+ + T +MAPE +
Sbjct: 191 DVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCD 250
Query: 454 AKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLR 486
AK D++S +++ P + F G + L+
Sbjct: 251 AKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLK 283
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 88/197 (44%), Gaps = 25/197 (12%)
Query: 285 FGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKA 344
GS +G + D AI N+ +++ R F ++ R R L+K ++ + +
Sbjct: 34 IGSGAQGIVCAAYD-AILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN---HKNIIG 89
Query: 345 LVLEFMPNGSLEKW--LYSHNYFLDI-----------LERLNIMI-DVGSALEYLHNGHS 390
L+ F P SLE++ +Y +D ER++ ++ + +++LH
Sbjct: 90 LLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---- 145
Query: 391 SVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEG 450
S IIH DLKP+NI++ + + DFG+ + G S + T Y APE L
Sbjct: 146 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMVPFVVTRYYRAPEVILGM 202
Query: 451 IVSAKCDVYSYGVLLME 467
D++S G ++ E
Sbjct: 203 GYKENVDIWSVGCIMGE 219
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 108/262 (41%), Gaps = 41/262 (15%)
Query: 300 AIKVFNLQL--ERAFRSFDSECEVLRNVR-HRNLIKILSSYSNPDFKALVLEFMPNGSLE 356
AIK NL+ + S+ +E L ++ H + I L Y D ++ N L
Sbjct: 56 AIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLN 115
Query: 357 KWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSD 416
WL +D ER + ++ A+ +H H I+H DLKP N L+ + M+ + D
Sbjct: 116 SWLKKKK-SIDPWERKSYWKNMLEAVHTIHQ-HG---IVHSDLKPANFLIVDGMLKLI-D 169
Query: 417 FGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAK------------CDVYSYGVL 464
FGI + V + + T+ YM PE ++ + S++ DV+S G +
Sbjct: 170 FGIANQMQPDXXXVVKDSQVGTVNYMPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCI 228
Query: 465 LMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMD 524
L K P ++ I ++S L ++D N E F D +
Sbjct: 229 LYYMTYGKTPFQQI-INQIS-----------KLHAIIDPN---HEIEFP---DIPEKDLQ 270
Query: 525 FALDCCME-SPDMRINMTDAAA 545
L CC++ P RI++ + A
Sbjct: 271 DVLKCCLKRDPKQRISIPELLA 292
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 70/151 (46%), Gaps = 20/151 (13%)
Query: 320 EVLRNVRHRNLIKILSSYSNPDFKA-----LVLEFMPNGSLEKWLYSHNYFLDILERLNI 374
+ L V H ++++I + + D +V+E++ SL++ S L + E +
Sbjct: 131 QFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKR---SKGQKLPVAEAIAY 187
Query: 375 MIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTM 434
++++ AL YLH S+ +++ DLKP NI+L E + + + ++ G
Sbjct: 188 LLEILPALSYLH----SIGLVYNDLKPENIMLTEEQLKLIDLGAVSRINSFG-------Y 236
Query: 435 TMATIGYMAPEYGLEGIVSAKCDVYSYGVLL 465
T G+ APE G A D+Y+ G L
Sbjct: 237 LYGTPGFQAPEIVRTGPTVA-TDIYTVGRTL 266
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 106/219 (48%), Gaps = 32/219 (14%)
Query: 268 QRATDEFNECNLLGTSSFGSVYKGT-ISDGTDVAIKVFNLQLERAFRSFDSECEVLRNV- 325
++ D F + G +FG+V G S G VAIK +Q R FR + E ++++++
Sbjct: 19 RKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKV-IQDPR-FR--NRELQIMQDLA 74
Query: 326 --RHRNLIKILSSY-------SNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 376
H N++++ S + + +V+E++P+ +L + NY+ + I+I
Sbjct: 75 VLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPD-TLHRC--CRNYYRRQVAPPPILI 131
Query: 377 DVG-----SALEYLHNGHSSVHIIHCDLKPTNILLDE-NMVAHVSDFGIYKLLGEGEDSV 430
V ++ LH SV++ H D+KP N+L++E + + DFG K L E +V
Sbjct: 132 KVFLFQLIRSIGCLH--LPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNV 189
Query: 431 RQTMTMATIGYMAPE--YGLEGIVSAKCDVYSYGVLLME 467
+ + Y APE +G + +A D++S G + E
Sbjct: 190 ---AYICSRYYRAPELIFGNQHYTTA-VDIWSVGCIFAE 224
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 101/243 (41%), Gaps = 46/243 (18%)
Query: 279 LLGTSSFGSVYKGT-ISDGTDVAIKVFNL-------QLERAFRSFDSECEVLRNVRH--R 328
LLG+ FGSVY G +SD VAIK +L R E +L+ V
Sbjct: 50 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFS 108
Query: 329 NLIKILSSYSNPDFKALVLE-----------FMPNGSLEKWLYSHNYFLDILERLNIMID 377
+I++L + PD L+LE G+L++ L + ++F +LE
Sbjct: 109 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-ARSFFWQVLE------- 160
Query: 378 VGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVA-HVSDFGIYKLLGEGEDSVRQTMTM 436
A+ + HN ++H D+K NIL+D N + DFG LL +D+V
Sbjct: 161 ---AVRHCHN----CGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDG 210
Query: 437 ATIGYMAPEY-GLEGIVSAKCDVYSYGVLLMETFTRKRP---TDEMFIGEMSLRRWVKES 492
+ Y PE+ V+S G+LL + P +E+ G++ R+ V
Sbjct: 211 TRV-YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSE 269
Query: 493 LPH 495
H
Sbjct: 270 CQH 272
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 101/243 (41%), Gaps = 46/243 (18%)
Query: 279 LLGTSSFGSVYKGT-ISDGTDVAIKVFNL-------QLERAFRSFDSECEVLRNVRH--R 328
LLG+ FGSVY G +SD VAIK +L R E +L+ V
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFS 89
Query: 329 NLIKILSSYSNPDFKALVLE-----------FMPNGSLEKWLYSHNYFLDILERLNIMID 377
+I++L + PD L+LE G+L++ L + ++F +LE
Sbjct: 90 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-ARSFFWQVLE------- 141
Query: 378 VGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVA-HVSDFGIYKLLGEGEDSVRQTMTM 436
A+ + HN ++H D+K NIL+D N + DFG LL +D+V
Sbjct: 142 ---AVRHCHN----CGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDG 191
Query: 437 ATIGYMAPEY-GLEGIVSAKCDVYSYGVLLMETFTRKRP---TDEMFIGEMSLRRWVKES 492
+ Y PE+ V+S G+LL + P +E+ G++ R+ V
Sbjct: 192 TRV-YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSE 250
Query: 493 LPH 495
H
Sbjct: 251 CQH 253
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 101/243 (41%), Gaps = 46/243 (18%)
Query: 279 LLGTSSFGSVYKGT-ISDGTDVAIKVFNL-------QLERAFRSFDSECEVLRNVRH--R 328
LLG+ FGSVY G +SD VAIK +L R E +L+ V
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFS 88
Query: 329 NLIKILSSYSNPDFKALVLE-----------FMPNGSLEKWLYSHNYFLDILERLNIMID 377
+I++L + PD L+LE G+L++ L + ++F +LE
Sbjct: 89 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-ARSFFWQVLE------- 140
Query: 378 VGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVA-HVSDFGIYKLLGEGEDSVRQTMTM 436
A+ + HN ++H D+K NIL+D N + DFG LL +D+V
Sbjct: 141 ---AVRHCHN----CGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDG 190
Query: 437 ATIGYMAPEY-GLEGIVSAKCDVYSYGVLLMETFTRKRP---TDEMFIGEMSLRRWVKES 492
+ Y PE+ V+S G+LL + P +E+ G++ R+ V
Sbjct: 191 TRV-YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSE 249
Query: 493 LPH 495
H
Sbjct: 250 CQH 252
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 101/243 (41%), Gaps = 46/243 (18%)
Query: 279 LLGTSSFGSVYKGT-ISDGTDVAIKVFNL-------QLERAFRSFDSECEVLRNVRH--R 328
LLG+ FGSVY G +SD VAIK +L R E +L+ V
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFS 116
Query: 329 NLIKILSSYSNPDFKALVLE-----------FMPNGSLEKWLYSHNYFLDILERLNIMID 377
+I++L + PD L+LE G+L++ L + ++F +LE
Sbjct: 117 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-ARSFFWQVLE------- 168
Query: 378 VGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVA-HVSDFGIYKLLGEGEDSVRQTMTM 436
A+ + HN ++H D+K NIL+D N + DFG LL +D+V
Sbjct: 169 ---AVRHCHN----CGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDG 218
Query: 437 ATIGYMAPEY-GLEGIVSAKCDVYSYGVLLMETFTRKRP---TDEMFIGEMSLRRWVKES 492
+ Y PE+ V+S G+LL + P +E+ G++ R+ V
Sbjct: 219 TRV-YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSE 277
Query: 493 LPH 495
H
Sbjct: 278 CQH 280
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 101/243 (41%), Gaps = 46/243 (18%)
Query: 279 LLGTSSFGSVYKGT-ISDGTDVAIKVFNL-------QLERAFRSFDSECEVLRNVRH--R 328
LLG+ FGSVY G +SD VAIK +L R E +L+ V
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFS 102
Query: 329 NLIKILSSYSNPDFKALVLE-----------FMPNGSLEKWLYSHNYFLDILERLNIMID 377
+I++L + PD L+LE G+L++ L + ++F +LE
Sbjct: 103 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-ARSFFWQVLE------- 154
Query: 378 VGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVA-HVSDFGIYKLLGEGEDSVRQTMTM 436
A+ + HN ++H D+K NIL+D N + DFG LL +D+V
Sbjct: 155 ---AVRHCHN----CGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDG 204
Query: 437 ATIGYMAPEY-GLEGIVSAKCDVYSYGVLLMETFTRKRP---TDEMFIGEMSLRRWVKES 492
+ Y PE+ V+S G+LL + P +E+ G++ R+ V
Sbjct: 205 TRV-YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSE 263
Query: 493 LPH 495
H
Sbjct: 264 CQH 266
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 103/249 (41%), Gaps = 46/249 (18%)
Query: 273 EFNECNLLGTSSFGSVYKGT-ISDGTDVAIKVFNL-------QLERAFRSFDSECEVLRN 324
++ LLG+ FGSVY G +SD VAIK +L R E +L+
Sbjct: 57 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKK 115
Query: 325 VRH--RNLIKILSSYSNPDFKALVLE-----------FMPNGSLEKWLYSHNYFLDILER 371
V +I++L + PD L+LE G+L++ L + ++F +LE
Sbjct: 116 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-ARSFFWQVLE- 173
Query: 372 LNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVA-HVSDFGIYKLLGEGEDSV 430
A+ + HN ++H D+K NIL+D N + DFG LL +D+V
Sbjct: 174 ---------AVRHCHN----CGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTV 217
Query: 431 RQTMTMATIGYMAPEY-GLEGIVSAKCDVYSYGVLLMETFTRKRP---TDEMFIGEMSLR 486
+ Y PE+ V+S G+LL + P +E+ G++ R
Sbjct: 218 YTDFDGTRV-YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 276
Query: 487 RWVKESLPH 495
+ V H
Sbjct: 277 QRVSXECQH 285
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 82/204 (40%), Gaps = 23/204 (11%)
Query: 278 NLLGTSSFGSVYKGTISD-GTDVAIKVFNLQLERAFRSFDSECEVLRNVRHR------NL 330
++G SFG V K VA+K+ + +R R E +L ++R + N+
Sbjct: 103 KVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNV 161
Query: 331 IKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERL--NIMIDVGSALEYLHNG 388
I +L +++ + + E + E L N F L + L+ LH
Sbjct: 162 IHMLENFTFRNHICMTFELLSMNLYE--LIKKNKFQGFSLPLVRKFAHSILQCLDALHKN 219
Query: 389 HSSVHIIHCDLKPTNILLDENMVA--HVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEY 446
IIHCDLKP NILL + + V DFG + R + + Y APE
Sbjct: 220 R----IIHCDLKPENILLKQQGRSGIKVIDFG-----SSCYEHQRVYTXIQSRFYRAPEV 270
Query: 447 GLEGIVSAKCDVYSYGVLLMETFT 470
L D++S G +L E T
Sbjct: 271 ILGARYGMPIDMWSLGCILAELLT 294
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 82/204 (40%), Gaps = 23/204 (11%)
Query: 278 NLLGTSSFGSVYKGTISD-GTDVAIKVFNLQLERAFRSFDSECEVLRNVRHR------NL 330
++G SFG V K VA+K+ + +R R E +L ++R + N+
Sbjct: 103 KVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNV 161
Query: 331 IKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERL--NIMIDVGSALEYLHNG 388
I +L +++ + + E + E L N F L + L+ LH
Sbjct: 162 IHMLENFTFRNHICMTFELLSMNLYE--LIKKNKFQGFSLPLVRKFAHSILQCLDALHKN 219
Query: 389 HSSVHIIHCDLKPTNILLDENMVA--HVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEY 446
IIHCDLKP NILL + + V DFG + R + + Y APE
Sbjct: 220 R----IIHCDLKPENILLKQQGRSGIKVIDFG-----SSCYEHQRVYTXIQSRFYRAPEV 270
Query: 447 GLEGIVSAKCDVYSYGVLLMETFT 470
L D++S G +L E T
Sbjct: 271 ILGARYGMPIDMWSLGCILAELLT 294
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 101/243 (41%), Gaps = 46/243 (18%)
Query: 279 LLGTSSFGSVYKGT-ISDGTDVAIKVFNL-------QLERAFRSFDSECEVLRNVRH--R 328
LLG+ FGSVY G +SD VAIK +L R E +L+ V
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFS 89
Query: 329 NLIKILSSYSNPDFKALVLE-----------FMPNGSLEKWLYSHNYFLDILERLNIMID 377
+I++L + PD L+LE G+L++ L + ++F +LE
Sbjct: 90 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-ARSFFWQVLE------- 141
Query: 378 VGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVA-HVSDFGIYKLLGEGEDSVRQTMTM 436
A+ + HN ++H D+K NIL+D N + DFG LL +D+V
Sbjct: 142 ---AVRHCHN----CGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDG 191
Query: 437 ATIGYMAPEY-GLEGIVSAKCDVYSYGVLLMETFTRKRP---TDEMFIGEMSLRRWVKES 492
+ Y PE+ V+S G+LL + P +E+ G++ R+ V
Sbjct: 192 TRV-YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXE 250
Query: 493 LPH 495
H
Sbjct: 251 CQH 253
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.138 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,780,771
Number of Sequences: 62578
Number of extensions: 684336
Number of successful extensions: 4089
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 790
Number of HSP's successfully gapped in prelim test: 355
Number of HSP's that attempted gapping in prelim test: 1799
Number of HSP's gapped (non-prelim): 1338
length of query: 593
length of database: 14,973,337
effective HSP length: 104
effective length of query: 489
effective length of database: 8,465,225
effective search space: 4139495025
effective search space used: 4139495025
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 54 (25.4 bits)