Query 007680
Match_columns 593
No_of_seqs 589 out of 4343
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 07:49:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007680.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007680hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4asz_A BDNF/NT-3 growth factor 100.0 7E-56 2.4E-60 445.1 16.5 260 271-553 12-290 (299)
2 4aoj_A High affinity nerve gro 100.0 3.5E-55 1.2E-59 446.1 20.2 260 271-553 40-320 (329)
3 3omv_A RAF proto-oncogene seri 100.0 6.6E-55 2.3E-59 438.1 21.7 265 270-555 34-303 (307)
4 4fih_A Serine/threonine-protei 100.0 1.1E-54 3.9E-59 441.9 18.8 250 272-546 74-324 (346)
5 4gt4_A Tyrosine-protein kinase 100.0 7.1E-55 2.4E-59 439.7 15.8 256 272-550 26-304 (308)
6 4b9d_A Serine/threonine-protei 100.0 2.3E-54 7.8E-59 440.3 16.9 251 271-546 23-277 (350)
7 4aw0_A HPDK1, 3-phosphoinositi 100.0 3.3E-54 1.1E-58 432.0 16.3 251 271-546 31-285 (311)
8 4g3f_A NF-kappa-beta-inducing 100.0 7.7E-54 2.6E-58 434.5 17.9 257 271-554 57-318 (336)
9 4fie_A Serine/threonine-protei 100.0 2.2E-53 7.6E-58 442.9 18.7 250 272-546 151-401 (423)
10 3fpq_A Serine/threonine-protei 100.0 1.4E-52 4.7E-57 418.2 20.8 247 275-546 29-283 (290)
11 3hyh_A Carbon catabolite-derep 100.0 1.4E-52 4.8E-57 414.5 19.6 246 272-546 13-263 (275)
12 4ase_A Vascular endothelial gr 100.0 1E-52 3.5E-57 431.3 16.7 267 265-553 57-348 (353)
13 3hmm_A TGF-beta receptor type- 100.0 1.4E-52 4.7E-57 423.7 16.7 275 272-552 3-297 (303)
14 3ubd_A Ribosomal protein S6 ki 100.0 1.2E-52 4.2E-57 420.7 10.6 248 272-546 24-282 (304)
15 4g31_A Eukaryotic translation 100.0 8.9E-51 3E-55 408.6 20.4 251 271-546 4-280 (299)
16 4b99_A Mitogen-activated prote 100.0 2.7E-48 9.4E-53 405.3 21.1 267 272-546 54-345 (398)
17 4f9c_A Cell division cycle 7-r 100.0 4.7E-48 1.6E-52 399.3 18.9 267 270-546 19-353 (361)
18 3uto_A Twitchin; kinase, muscl 100.0 2.9E-47 9.9E-52 416.6 20.1 253 271-546 156-411 (573)
19 3v5w_A G-protein coupled recep 100.0 1.5E-46 5E-51 408.6 23.2 249 271-546 188-450 (689)
20 2qkw_B Protein kinase; three-h 100.0 1E-45 3.5E-50 377.8 18.5 283 262-553 29-316 (321)
21 3s95_A LIMK-1, LIM domain kina 100.0 8.9E-45 3E-49 368.9 22.8 263 271-554 9-284 (310)
22 3fxz_A Serine/threonine-protei 100.0 4.6E-45 1.6E-49 368.8 20.5 251 271-546 19-270 (297)
23 3soc_A Activin receptor type-2 100.0 5.9E-45 2E-49 372.4 19.4 278 270-553 22-319 (322)
24 3uim_A Brassinosteroid insensi 100.0 7.5E-45 2.6E-49 372.1 19.7 286 258-550 16-309 (326)
25 2psq_A Fibroblast growth facto 100.0 1.9E-44 6.3E-49 375.7 21.9 261 271-554 80-366 (370)
26 3p86_A Serine/threonine-protei 100.0 2.3E-44 8E-49 365.7 18.8 262 268-554 33-300 (309)
27 3ugc_A Tyrosine-protein kinase 100.0 1E-44 3.4E-49 365.8 15.7 276 271-554 9-293 (295)
28 2c30_A Serine/threonine-protei 100.0 8.1E-44 2.8E-48 363.7 22.1 262 260-546 23-295 (321)
29 3fe3_A MAP/microtubule affinit 100.0 2.9E-44 9.8E-49 367.8 18.5 249 270-546 13-265 (328)
30 3kul_A Ephrin type-A receptor 100.0 3.5E-44 1.2E-48 367.1 18.7 262 271-555 48-316 (325)
31 3cbl_A C-FES, proto-oncogene t 100.0 9.7E-45 3.3E-49 379.0 14.4 261 270-553 112-375 (377)
32 2nru_A Interleukin-1 receptor- 100.0 4.1E-43 1.4E-47 356.0 25.5 281 259-552 12-306 (307)
33 4hcu_A Tyrosine-protein kinase 100.0 7.5E-44 2.6E-48 354.4 19.0 258 271-553 9-267 (269)
34 4eqm_A Protein kinase; transfe 100.0 1.4E-43 4.7E-48 357.4 21.0 272 271-563 10-286 (294)
35 3niz_A Rhodanese family protei 100.0 3.4E-43 1.2E-47 357.5 22.6 268 271-546 20-301 (311)
36 3zgw_A Maternal embryonic leuc 100.0 4.8E-44 1.7E-48 368.4 16.4 251 270-546 8-261 (347)
37 3vhe_A Vascular endothelial gr 100.0 3.7E-44 1.3E-48 372.0 15.1 269 263-553 13-356 (359)
38 1o6l_A RAC-beta serine/threoni 100.0 2.7E-43 9.4E-48 361.6 21.2 249 271-546 4-261 (337)
39 1tki_A Titin; serine kinase, m 100.0 3.7E-43 1.3E-47 358.7 22.0 252 271-546 4-258 (321)
40 3sxs_A Cytoplasmic tyrosine-pr 100.0 1.9E-43 6.6E-48 351.2 19.3 259 270-553 6-265 (268)
41 2yab_A Death-associated protei 100.0 2.7E-43 9.4E-48 364.9 20.9 252 271-546 11-273 (361)
42 3tki_A Serine/threonine-protei 100.0 9.5E-44 3.3E-48 363.5 16.7 254 271-546 6-262 (323)
43 4aw2_A Serine/threonine-protei 100.0 6.1E-44 2.1E-48 378.2 15.7 263 263-546 65-339 (437)
44 2qol_A Ephrin receptor; recept 100.0 1.7E-43 5.9E-48 368.7 18.3 261 271-554 44-311 (373)
45 3lb7_A RAF proto-oncogene seri 100.0 4.8E-43 1.6E-47 355.7 21.1 264 270-555 34-303 (307)
46 3tt0_A Basic fibroblast growth 100.0 2.5E-43 8.5E-48 369.0 19.2 264 271-557 68-357 (382)
47 3op5_A Serine/threonine-protei 100.0 7.9E-43 2.7E-47 362.9 22.4 282 270-565 33-343 (364)
48 2ivs_A Proto-oncogene tyrosine 100.0 2.9E-43 1E-47 358.1 18.7 261 270-553 21-312 (314)
49 1csn_A Casein kinase-1; phosph 100.0 1.1E-42 3.8E-47 351.1 22.6 274 271-564 9-296 (298)
50 2y0a_A Death-associated protei 100.0 6.2E-43 2.1E-47 358.0 20.9 252 271-546 10-272 (326)
51 3gen_A Tyrosine-protein kinase 100.0 4.5E-43 1.6E-47 351.4 19.4 259 270-553 22-281 (283)
52 3q4u_A Activin receptor type-1 100.0 8.6E-43 3E-47 352.4 21.4 266 271-550 7-300 (301)
53 3l9p_A Anaplastic lymphoma kin 100.0 1.2E-43 4.2E-48 369.1 15.4 261 271-554 70-347 (367)
54 2izr_A Casein kinase I isoform 100.0 1.3E-42 4.5E-47 356.2 22.8 274 271-564 8-294 (330)
55 3poz_A Epidermal growth factor 100.0 1.5E-43 5.1E-48 362.8 15.6 259 271-553 14-279 (327)
56 1luf_A Muscle-specific tyrosin 100.0 4.8E-43 1.6E-47 361.2 19.4 263 269-554 44-337 (343)
57 3soa_A Calcium/calmodulin-depe 100.0 9.1E-43 3.1E-47 370.5 22.0 255 269-546 8-268 (444)
58 4euu_A Serine/threonine-protei 100.0 1.6E-42 5.5E-47 353.8 22.7 274 271-551 8-308 (319)
59 3dtc_A Mitogen-activated prote 100.0 2.6E-43 9E-48 350.7 16.3 254 271-550 6-271 (271)
60 1rjb_A FL cytokine receptor; k 100.0 2.3E-43 7.8E-48 363.9 16.4 266 269-556 42-338 (344)
61 3c0i_A Peripheral plasma membr 100.0 7.3E-43 2.5E-47 361.1 20.2 253 271-546 23-287 (351)
62 1kob_A Twitchin; kinase, intra 100.0 6E-43 2.1E-47 365.6 19.7 253 271-546 50-305 (387)
63 2bdw_A Hypothetical protein K1 100.0 1.9E-42 6.6E-47 359.3 22.8 253 270-546 27-285 (362)
64 3o0g_A Cell division protein k 100.0 9.9E-43 3.4E-47 350.7 20.0 268 272-546 2-283 (292)
65 1t46_A HOMO sapiens V-KIT hard 100.0 5.2E-43 1.8E-47 356.0 17.8 263 270-554 21-309 (313)
66 3txo_A PKC-L, NPKC-ETA, protei 100.0 3.3E-43 1.1E-47 363.4 16.4 250 270-546 21-281 (353)
67 3qd2_B Eukaryotic translation 100.0 1.5E-42 5.2E-47 355.4 21.2 252 270-546 4-326 (332)
68 2zv2_A Calcium/calmodulin-depe 100.0 3.9E-43 1.3E-47 354.8 16.5 250 271-546 12-293 (298)
69 4f0f_A Serine/threonine-protei 100.0 1.4E-42 4.9E-47 348.5 20.4 253 271-550 18-287 (287)
70 2eva_A TAK1 kinase - TAB1 chim 100.0 2.7E-42 9.3E-47 350.2 22.5 265 271-563 7-274 (307)
71 3h4j_B AMPK kdaid, SNF1-like p 100.0 4.4E-43 1.5E-47 359.7 16.8 247 271-546 8-259 (336)
72 1ob3_A PFPK5, cell division co 100.0 4.7E-43 1.6E-47 352.4 16.6 267 272-546 2-281 (288)
73 4fr4_A YANK1, serine/threonine 100.0 4.5E-42 1.5E-46 358.0 24.4 250 271-546 14-272 (384)
74 1fot_A TPK1 delta, CAMP-depend 100.0 1.6E-42 5.4E-47 353.3 20.4 246 271-546 5-259 (318)
75 2x4f_A Myosin light chain kina 100.0 1.7E-42 5.7E-47 361.1 20.4 250 274-546 91-343 (373)
76 3og7_A AKAP9-BRAF fusion prote 100.0 1.1E-42 3.7E-47 349.9 18.2 261 270-552 22-288 (289)
77 3gni_B Strad alpha; kinase fol 100.0 2.5E-42 8.7E-47 362.4 21.3 276 271-551 24-341 (389)
78 4dc2_A Protein kinase C IOTA t 100.0 1.4E-42 4.8E-47 363.1 19.2 259 270-546 50-319 (396)
79 3qup_A Tyrosine-protein kinase 100.0 5.7E-43 1.9E-47 357.7 15.7 263 269-554 20-300 (323)
80 4e5w_A Tyrosine-protein kinase 100.0 9.9E-43 3.4E-47 352.2 17.3 270 271-551 20-301 (302)
81 1xjd_A Protein kinase C, theta 100.0 8.1E-43 2.8E-47 359.1 16.8 252 268-546 13-270 (345)
82 3t9t_A Tyrosine-protein kinase 100.0 1.8E-42 6E-47 343.8 18.6 257 271-552 7-264 (267)
83 2pvf_A Fibroblast growth facto 100.0 5.8E-42 2E-46 352.0 22.8 263 270-555 33-321 (334)
84 3mdy_A Bone morphogenetic prot 100.0 1.6E-41 5.3E-46 348.9 25.9 274 267-554 32-333 (337)
85 3v8s_A RHO-associated protein 100.0 6.5E-43 2.2E-47 367.5 15.8 260 264-546 61-330 (410)
86 3kex_A Receptor tyrosine-prote 100.0 9.6E-43 3.3E-47 356.5 16.4 259 271-553 12-277 (325)
87 2vd5_A DMPK protein; serine/th 100.0 1.4E-42 4.8E-47 365.2 18.1 261 264-546 53-328 (412)
88 2i1m_A Macrophage colony-stimu 100.0 5.3E-43 1.8E-47 359.5 14.4 266 267-554 41-328 (333)
89 1rdq_E PKA C-alpha, CAMP-depen 100.0 2.5E-42 8.7E-47 356.4 19.4 246 271-546 40-294 (350)
90 1mp8_A Focal adhesion kinase 1 100.0 4E-42 1.4E-46 344.3 20.2 259 270-553 13-277 (281)
91 3lxl_A Tyrosine-protein kinase 100.0 1.3E-42 4.4E-47 355.8 16.8 276 271-554 22-305 (327)
92 3dbq_A Dual specificity protei 100.0 1.7E-42 6E-47 357.3 17.9 252 271-546 8-274 (343)
93 2xir_A Vascular endothelial gr 100.0 1.2E-42 4E-47 354.0 16.3 270 263-554 18-312 (316)
94 3p1a_A MYT1 kinase, membrane-a 100.0 4.1E-42 1.4E-46 349.6 20.2 246 271-546 56-305 (311)
95 3a8x_A Protein kinase C IOTA t 100.0 3.1E-42 1.1E-46 355.2 19.5 258 271-546 8-276 (345)
96 3f3z_A Calcium/calmodulin-depe 100.0 5.1E-42 1.8E-46 342.6 20.2 252 270-546 7-262 (277)
97 2pmi_A Negative RE, cyclin-dep 100.0 3.3E-42 1.1E-46 351.2 19.2 269 270-546 3-294 (317)
98 2w1i_A JAK2; chromosomal rearr 100.0 1.8E-42 6.1E-47 354.6 17.2 276 271-554 40-324 (326)
99 3llt_A Serine/threonine kinase 100.0 3.6E-42 1.2E-46 357.3 19.6 274 260-546 23-356 (360)
100 3kmu_A ILK, integrin-linked ki 100.0 1.9E-42 6.5E-47 344.1 16.7 254 271-552 9-270 (271)
101 3lxp_A Non-receptor tyrosine-p 100.0 5.9E-42 2E-46 349.5 20.7 273 274-557 33-315 (318)
102 1k9a_A Carboxyl-terminal SRC k 100.0 2.9E-42 9.8E-47 368.6 19.1 253 270-553 191-446 (450)
103 1mqb_A Ephrin type-A receptor 100.0 5.2E-42 1.8E-46 352.2 20.2 270 271-563 43-320 (333)
104 2yex_A Serine/threonine-protei 100.0 6.3E-42 2.2E-46 341.6 20.2 255 270-546 5-262 (276)
105 1u59_A Tyrosine-protein kinase 100.0 1E-41 3.5E-46 342.4 21.8 266 271-560 8-280 (287)
106 2w4o_A Calcium/calmodulin-depe 100.0 4.4E-42 1.5E-46 354.9 19.5 252 270-546 51-306 (349)
107 3brb_A Proto-oncogene tyrosine 100.0 2.1E-42 7.1E-47 351.9 16.8 268 265-555 27-311 (313)
108 3uc3_A Serine/threonine-protei 100.0 2.3E-42 8E-47 358.6 17.5 253 271-546 19-275 (361)
109 4fvq_A Tyrosine-protein kinase 100.0 5.6E-43 1.9E-47 351.7 12.4 252 271-553 7-276 (289)
110 3g2f_A Bone morphogenetic prot 100.0 1.6E-42 5.5E-47 356.3 15.9 285 271-559 12-325 (336)
111 3kfa_A Tyrosine-protein kinase 100.0 1.1E-42 3.8E-47 349.4 14.4 262 268-554 9-273 (288)
112 3kk8_A Calcium/calmodulin depe 100.0 8.7E-42 3E-46 342.1 20.7 252 271-546 5-262 (284)
113 3ork_A Serine/threonine protei 100.0 9.6E-43 3.3E-47 354.2 13.9 260 271-551 11-280 (311)
114 1qcf_A Haematopoetic cell kina 100.0 8.2E-43 2.8E-47 373.3 14.1 261 268-554 184-446 (454)
115 3oz6_A Mitogen-activated prote 100.0 1.1E-41 3.7E-46 357.5 22.3 274 269-550 6-335 (388)
116 3lzb_A Epidermal growth factor 100.0 1.3E-42 4.5E-47 355.7 14.9 259 271-553 14-279 (327)
117 1p4o_A Insulin-like growth fac 100.0 8.9E-43 3E-47 356.0 13.5 267 264-553 17-300 (322)
118 4hgt_A Casein kinase I isoform 100.0 1.3E-41 4.4E-46 342.8 21.8 275 270-565 7-294 (296)
119 3a62_A Ribosomal protein S6 ki 100.0 3.3E-42 1.1E-46 352.7 17.6 249 271-546 16-277 (327)
120 3cok_A Serine/threonine-protei 100.0 3.8E-42 1.3E-46 343.7 17.6 250 271-546 10-263 (278)
121 3hko_A Calcium/calmodulin-depe 100.0 6E-42 2E-46 353.3 19.5 261 266-546 20-331 (345)
122 2i0e_A Protein kinase C-beta I 100.0 3.6E-42 1.2E-46 355.4 17.9 250 270-546 18-277 (353)
123 3dls_A PAS domain-containing s 100.0 2.2E-42 7.4E-47 355.2 16.0 243 270-546 22-275 (335)
124 3fdn_A Serine/threonine-protei 100.0 5.1E-42 1.7E-46 343.1 18.2 248 270-546 7-258 (279)
125 2a2a_A Death-associated protei 100.0 9.3E-42 3.2E-46 348.5 20.6 253 270-546 10-273 (321)
126 2y94_A 5'-AMP-activated protei 100.0 7.2E-42 2.5E-46 366.0 20.4 248 271-546 15-267 (476)
127 2eue_A Carbon catabolite derep 100.0 3.8E-42 1.3E-46 343.2 16.6 247 271-546 12-263 (275)
128 2zmd_A Dual specificity protei 100.0 6.2E-42 2.1E-46 359.1 18.9 251 272-546 56-321 (390)
129 2wqm_A Serine/threonine-protei 100.0 1.6E-41 5.4E-46 344.9 21.3 265 271-557 31-302 (310)
130 3kn6_A Ribosomal protein S6 ki 100.0 5.7E-42 1.9E-46 350.6 18.0 254 272-546 8-271 (325)
131 1opk_A P150, C-ABL, proto-onco 100.0 3.2E-42 1.1E-46 372.3 16.8 259 269-552 217-478 (495)
132 1b6c_B TGF-B superfamily recep 100.0 3.3E-41 1.1E-45 347.3 23.5 276 265-554 35-338 (342)
133 3uzp_A CKI-delta, CKID, casein 100.0 2.1E-41 7.3E-46 341.3 21.7 274 271-565 8-294 (296)
134 2buj_A Serine/threonine-protei 100.0 1.1E-41 3.8E-46 347.1 19.7 263 271-554 28-308 (317)
135 3cc6_A Protein tyrosine kinase 100.0 2E-41 6.8E-46 339.2 20.9 260 270-554 10-275 (281)
136 4agu_A Cyclin-dependent kinase 100.0 1.5E-41 5E-46 345.2 20.2 267 271-546 2-285 (311)
137 3mtl_A Cell division protein k 100.0 3.3E-42 1.1E-46 352.3 15.3 271 272-551 2-289 (324)
138 2a19_B Interferon-induced, dou 100.0 6.5E-42 2.2E-46 342.8 17.1 253 270-557 9-279 (284)
139 3g33_A Cell division protein k 100.0 1E-41 3.5E-46 346.0 18.6 268 270-546 7-297 (308)
140 2h34_A Serine/threonine-protei 100.0 1.4E-41 4.8E-46 345.2 19.6 261 271-554 33-298 (309)
141 2v62_A Serine/threonine-protei 100.0 7.3E-42 2.5E-46 352.9 17.7 268 271-553 36-329 (345)
142 3is5_A Calcium-dependent prote 100.0 7.6E-42 2.6E-46 343.1 17.3 251 271-546 21-279 (285)
143 1u5q_A Serine/threonine protei 100.0 6E-42 2E-46 353.6 16.9 248 271-547 53-307 (348)
144 3pls_A Macrophage-stimulating 100.0 1.1E-41 3.8E-46 343.7 18.5 263 273-557 22-292 (298)
145 2ac3_A MAP kinase-interacting 100.0 1.7E-41 5.8E-46 345.6 20.0 268 271-546 11-296 (316)
146 3c1x_A Hepatocyte growth facto 100.0 3.4E-42 1.2E-46 358.7 15.0 263 272-557 89-360 (373)
147 2yfx_A Tyrosine-protein kinase 100.0 1.7E-41 6E-46 347.4 19.8 261 271-554 29-306 (327)
148 2jii_A Serine/threonine-protei 100.0 3.1E-42 1.1E-46 356.7 14.4 276 271-565 41-350 (352)
149 4ejn_A RAC-alpha serine/threon 100.0 3.5E-42 1.2E-46 367.8 15.2 250 271-546 147-405 (446)
150 3f66_A Hepatocyte growth facto 100.0 2.7E-41 9.1E-46 341.1 20.6 262 271-555 24-294 (298)
151 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 2.9E-42 9.8E-47 368.8 14.0 260 269-554 181-442 (452)
152 3ttj_A Mitogen-activated prote 100.0 2.3E-41 8E-46 362.3 20.8 263 271-546 61-356 (464)
153 3bhy_A Death-associated protei 100.0 2.6E-41 8.8E-46 338.5 19.5 257 271-551 4-273 (283)
154 1qpc_A LCK kinase; alpha beta 100.0 1.2E-41 4E-46 340.4 16.7 259 270-554 11-271 (279)
155 3rp9_A Mitogen-activated prote 100.0 4.5E-41 1.5E-45 360.5 22.4 274 271-550 52-403 (458)
156 2r5t_A Serine/threonine-protei 100.0 1.1E-41 3.7E-46 354.3 16.9 247 271-544 37-288 (373)
157 2qr7_A Ribosomal protein S6 ki 100.0 1.2E-41 4.1E-46 350.4 16.8 252 270-546 20-278 (342)
158 2j7t_A Serine/threonine-protei 100.0 6.6E-42 2.2E-46 346.2 14.5 253 271-546 18-276 (302)
159 3nsz_A CK II alpha, casein kin 100.0 4.2E-41 1.5E-45 344.8 20.6 262 271-546 35-320 (330)
160 1u46_A ACK-1, activated CDC42 100.0 9.9E-42 3.4E-46 342.9 15.6 261 271-554 17-286 (291)
161 2y7j_A Phosphorylase B kinase 100.0 6.7E-41 2.3E-45 348.3 22.3 258 265-546 87-360 (365)
162 3eqc_A Dual specificity mitoge 100.0 8.8E-42 3E-46 354.4 15.6 267 271-546 32-325 (360)
163 2rku_A Serine/threonine-protei 100.0 2.8E-41 9.7E-46 340.3 18.7 249 271-546 14-266 (294)
164 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.1E-41 3.8E-46 349.1 15.9 268 270-546 32-319 (329)
165 1nxk_A MAP kinase-activated pr 100.0 1.9E-41 6.5E-46 356.5 17.9 250 271-546 60-322 (400)
166 2acx_A G protein-coupled recep 100.0 2.2E-41 7.7E-46 367.2 18.9 252 270-546 182-445 (576)
167 2jam_A Calcium/calmodulin-depe 100.0 2.3E-41 8E-46 342.7 17.8 251 271-546 8-262 (304)
168 1cm8_A Phosphorylated MAP kina 100.0 8E-41 2.7E-45 347.8 22.2 262 271-546 24-308 (367)
169 2vgo_A Serine/threonine-protei 100.0 3.9E-41 1.3E-45 337.5 19.2 247 271-546 13-263 (284)
170 4aaa_A Cyclin-dependent kinase 100.0 2.3E-41 7.7E-46 347.2 17.8 268 271-546 24-307 (331)
171 3gxj_A TGF-beta receptor type- 100.0 4.9E-43 1.7E-47 354.4 5.2 269 271-553 2-298 (303)
172 3com_A Serine/threonine-protei 100.0 4.6E-41 1.6E-45 342.1 19.7 252 270-546 27-279 (314)
173 2owb_A Serine/threonine-protei 100.0 2.8E-41 9.6E-46 347.1 18.2 249 271-546 40-292 (335)
174 4eut_A Serine/threonine-protei 100.0 1.8E-41 6.1E-46 356.6 17.0 276 271-553 8-310 (396)
175 3n9x_A Phosphotransferase; mal 100.0 8.6E-41 2.9E-45 355.3 22.3 275 271-551 25-369 (432)
176 3e7e_A HBUB1, BUB1A, mitotic c 100.0 3.1E-41 1E-45 351.0 18.4 255 269-554 62-341 (365)
177 1fvr_A Tyrosine-protein kinase 100.0 1.9E-41 6.5E-46 347.1 16.6 258 271-554 24-302 (327)
178 3mwu_A Calmodulin-domain prote 100.0 5.4E-41 1.9E-45 362.5 21.0 252 270-546 20-277 (486)
179 1xbb_A Tyrosine-protein kinase 100.0 6E-41 2.1E-45 337.5 19.8 263 270-557 14-284 (291)
180 1ua2_A CAK, cell division prot 100.0 1.9E-41 6.5E-46 349.9 16.4 271 268-546 6-292 (346)
181 3i6u_A CDS1, serine/threonine- 100.0 2.9E-41 1E-45 357.4 17.9 254 269-546 132-400 (419)
182 3ll6_A Cyclin G-associated kin 100.0 3.4E-41 1.1E-45 346.1 17.5 259 271-554 27-310 (337)
183 1byg_A CSK, protein (C-termina 100.0 1.3E-41 4.6E-46 339.8 14.0 252 271-553 20-274 (278)
184 3mi9_A Cell division protein k 100.0 1.4E-40 4.9E-45 344.1 22.1 269 271-546 16-312 (351)
185 1t4h_A Serine/threonine-protei 100.0 1.4E-40 4.9E-45 334.5 21.5 250 272-546 26-283 (290)
186 3a7i_A MST3 kinase, serine/thr 100.0 1.3E-40 4.6E-45 336.9 21.3 250 271-547 21-272 (303)
187 3c4z_A Rhodopsin kinase; Ser/T 100.0 1E-40 3.4E-45 361.2 21.6 254 271-546 184-449 (543)
188 3fme_A Dual specificity mitoge 100.0 6.5E-41 2.2E-45 336.7 18.7 253 270-546 5-267 (290)
189 2clq_A Mitogen-activated prote 100.0 1.1E-40 3.8E-45 335.9 20.0 251 273-546 23-279 (295)
190 3lij_A Calcium/calmodulin depe 100.0 8.9E-41 3E-45 361.5 20.4 255 271-550 36-298 (494)
191 2h6d_A 5'-AMP-activated protei 100.0 8.4E-41 2.9E-45 333.5 18.6 248 271-546 10-262 (276)
192 2ozo_A Tyrosine-protein kinase 100.0 2.7E-41 9.4E-46 373.7 16.5 260 272-555 335-601 (613)
193 3nyv_A Calmodulin-domain prote 100.0 3.3E-41 1.1E-45 364.1 16.2 251 271-546 25-282 (484)
194 3q5i_A Protein kinase; CDPK, m 100.0 1.5E-40 5.2E-45 360.6 21.3 251 271-546 35-302 (504)
195 2wtk_C Serine/threonine-protei 100.0 1.7E-40 5.9E-45 336.2 20.4 251 271-546 4-264 (305)
196 3lm5_A Serine/threonine-protei 100.0 4E-41 1.4E-45 344.8 15.6 262 262-546 18-288 (327)
197 3qyz_A Mitogen-activated prote 100.0 2.4E-40 8.2E-45 344.1 21.7 267 271-546 26-314 (364)
198 3pg1_A Mitogen-activated prote 100.0 1.8E-40 6.3E-45 344.7 20.4 276 262-546 12-317 (362)
199 2xrw_A Mitogen-activated prote 100.0 3.4E-40 1.2E-44 343.8 22.4 263 271-546 24-319 (371)
200 3byv_A Rhoptry kinase; malaria 100.0 5.6E-42 1.9E-46 358.2 8.9 247 271-552 72-368 (377)
201 2i6l_A Mitogen-activated prote 100.0 2.4E-40 8.1E-45 337.3 20.5 267 271-546 10-306 (320)
202 2pml_X PFPK7, Ser/Thr protein 100.0 4.9E-41 1.7E-45 346.9 15.6 265 271-546 30-323 (348)
203 2r3i_A Cell division protein k 100.0 1.5E-40 5.3E-45 335.6 18.9 267 272-546 3-284 (299)
204 1x8b_A WEE1HU, WEE1-like prote 100.0 2.3E-40 7.7E-45 332.0 19.7 245 270-546 9-280 (289)
205 2w5a_A Serine/threonine-protei 100.0 4.8E-41 1.6E-45 335.8 14.5 258 271-549 5-271 (279)
206 2h8h_A Proto-oncogene tyrosine 100.0 1.2E-41 4.1E-46 371.2 11.0 261 267-553 262-524 (535)
207 1phk_A Phosphorylase kinase; g 100.0 2.2E-40 7.5E-45 334.3 19.4 253 270-546 15-284 (298)
208 3pfq_A PKC-B, PKC-beta, protei 100.0 2.2E-40 7.6E-45 369.8 21.3 251 269-546 338-598 (674)
209 2fst_X Mitogen-activated prote 100.0 1.4E-40 4.6E-45 345.9 18.2 262 271-546 28-312 (367)
210 2vwi_A Serine/threonine-protei 100.0 5.5E-41 1.9E-45 339.4 14.7 264 269-546 12-288 (303)
211 3kvw_A DYRK2, dual specificity 100.0 3.2E-40 1.1E-44 350.4 21.1 197 271-478 96-302 (429)
212 2ycf_A Serine/threonine-protei 100.0 1.8E-40 6.3E-45 339.0 18.4 253 270-546 8-275 (322)
213 3q60_A ROP5B; pseudokinase, tr 100.0 1.2E-41 4E-46 355.0 9.6 260 271-551 61-360 (371)
214 3an0_A Dual specificity mitoge 100.0 1.4E-40 4.8E-45 342.5 17.2 253 270-546 49-311 (340)
215 1vzo_A Ribosomal protein S6 ki 100.0 3.9E-41 1.3E-45 348.7 12.4 255 271-547 53-323 (355)
216 3cek_A Dual specificity protei 100.0 2.3E-40 8E-45 336.8 17.7 256 267-546 23-293 (313)
217 4fl3_A Tyrosine-protein kinase 100.0 9.7E-41 3.3E-45 370.3 16.1 252 278-554 375-633 (635)
218 3eb0_A Putative uncharacterize 100.0 2E-40 7E-45 347.1 17.6 272 268-552 3-330 (383)
219 1wak_A Serine/threonine-protei 100.0 2.2E-40 7.6E-45 348.1 17.7 266 271-546 36-392 (397)
220 3sv0_A Casein kinase I-like; t 100.0 1E-39 3.4E-44 350.0 23.0 263 271-554 6-280 (483)
221 2x7f_A TRAF2 and NCK-interacti 100.0 4.8E-41 1.6E-45 343.8 12.1 259 263-546 15-287 (326)
222 1z57_A Dual specificity protei 100.0 9.6E-40 3.3E-44 335.4 21.4 263 271-546 13-329 (339)
223 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.9E-41 6.3E-46 345.7 7.8 266 266-556 27-306 (319)
224 1zy4_A Serine/threonine-protei 100.0 1.2E-39 4E-44 329.3 20.1 254 270-546 4-284 (303)
225 2b9h_A MAP kinase FUS3, mitoge 100.0 1.1E-39 3.8E-44 337.5 19.0 268 271-546 10-306 (353)
226 3e3p_A Protein kinase, putativ 100.0 9.5E-40 3.3E-44 338.9 18.1 279 265-551 16-322 (360)
227 4exu_A Mitogen-activated prote 100.0 1.8E-39 6.1E-44 338.4 20.0 266 271-550 41-330 (371)
228 2wei_A Calmodulin-domain prote 100.0 1E-39 3.4E-44 327.9 17.2 253 269-546 19-277 (287)
229 2vx3_A Dual specificity tyrosi 100.0 4.4E-39 1.5E-43 336.8 22.4 201 269-478 51-261 (382)
230 4e7w_A Glycogen synthase kinas 100.0 8.6E-40 3E-44 343.4 17.0 269 271-551 39-329 (394)
231 2dyl_A Dual specificity mitoge 100.0 1.2E-39 4.1E-44 332.0 17.4 253 271-546 24-284 (318)
232 2j0j_A Focal adhesion kinase 1 100.0 2.9E-39 9.8E-44 359.8 21.6 263 266-553 384-652 (656)
233 3rgf_A Cyclin-dependent kinase 100.0 1.6E-39 5.6E-44 342.8 18.3 269 271-546 19-334 (405)
234 1j1b_A Glycogen synthase kinas 100.0 9.9E-40 3.4E-44 345.8 16.5 263 271-546 53-337 (420)
235 1blx_A Cyclin-dependent kinase 100.0 1.4E-39 4.8E-44 332.8 17.1 268 270-546 9-297 (326)
236 2eu9_A Dual specificity protei 100.0 4.7E-39 1.6E-43 332.6 20.4 263 271-546 18-334 (355)
237 1q8y_A SR protein kinase; tran 100.0 4E-39 1.4E-43 335.8 18.9 265 271-546 18-334 (373)
238 3a99_A Proto-oncogene serine/t 100.0 6.1E-40 2.1E-44 334.9 12.0 243 269-546 40-294 (320)
239 2rio_A Serine/threonine-protei 100.0 3.2E-39 1.1E-43 343.3 17.4 251 273-546 16-296 (434)
240 2iwi_A Serine/threonine-protei 100.0 7.8E-40 2.7E-44 332.7 12.0 245 267-546 26-284 (312)
241 3coi_A Mitogen-activated prote 100.0 5.4E-39 1.8E-43 332.5 18.1 262 271-546 23-306 (353)
242 3aln_A Dual specificity mitoge 100.0 2.1E-39 7.2E-44 331.9 14.9 255 271-546 21-286 (327)
243 3fhr_A MAP kinase-activated pr 100.0 5.2E-39 1.8E-43 330.2 16.3 252 271-546 27-288 (336)
244 3p23_A Serine/threonine-protei 100.0 5.3E-39 1.8E-43 340.9 16.3 251 271-546 23-284 (432)
245 3qa8_A MGC80376 protein; kinas 100.0 1.2E-38 4.2E-43 349.1 11.8 263 271-544 13-296 (676)
246 3uqc_A Probable conserved tran 100.0 1.4E-37 4.6E-42 312.1 17.3 234 271-554 30-267 (286)
247 2pzi_A Probable serine/threoni 100.0 1.4E-37 4.7E-42 349.2 16.2 241 271-552 79-328 (681)
248 3m2w_A MAP kinase-activated pr 100.0 6.1E-37 2.1E-41 309.5 17.2 231 271-546 16-257 (299)
249 3dzo_A Rhoptry kinase domain; 100.0 1.4E-37 4.9E-42 328.5 11.6 247 271-552 77-372 (413)
250 2vuw_A Serine/threonine-protei 100.0 8.1E-38 2.8E-42 321.4 5.7 244 271-546 19-332 (336)
251 4azs_A Methyltransferase WBDD; 100.0 2.7E-30 9.2E-35 282.4 6.0 185 279-474 241-437 (569)
252 3en9_A Glycoprotease, O-sialog 99.9 1.6E-26 5.5E-31 251.2 9.4 186 275-476 339-539 (540)
253 3rgz_A Protein brassinosteroid 99.9 1.2E-25 4.1E-30 255.8 14.5 195 1-206 468-753 (768)
254 1ogq_A PGIP-2, polygalacturona 99.9 1.8E-24 6E-29 219.6 12.6 186 1-195 103-309 (313)
255 1zar_A RIO2 kinase; serine kin 99.9 1.9E-23 6.5E-28 208.3 9.6 149 268-448 86-252 (282)
256 2o6q_A Variable lymphocyte rec 99.9 8.2E-22 2.8E-26 195.5 17.7 178 1-192 39-220 (270)
257 3rgz_A Protein brassinosteroid 99.9 2.3E-22 8E-27 228.7 13.6 166 2-175 445-684 (768)
258 3zyj_A Leucine-rich repeat-con 99.9 7.5E-22 2.6E-26 210.0 15.3 183 1-191 90-293 (440)
259 1ogq_A PGIP-2, polygalacturona 99.9 1.3E-22 4.5E-27 205.7 8.9 156 1-165 78-239 (313)
260 3m19_A Variable lymphocyte rec 99.9 1.6E-21 5.4E-26 191.3 16.3 174 2-192 17-194 (251)
261 3zyi_A Leucine-rich repeat-con 99.9 9.3E-22 3.2E-26 210.0 13.9 184 1-191 77-304 (452)
262 1ozn_A Reticulon 4 receptor; N 99.9 4.1E-21 1.4E-25 192.0 15.6 165 1-173 34-203 (285)
263 3m19_A Variable lymphocyte rec 99.9 5.5E-21 1.9E-25 187.4 16.1 156 1-164 37-196 (251)
264 4fcg_A Uncharacterized protein 99.9 2E-21 6.8E-26 198.3 12.6 159 1-171 106-277 (328)
265 1p9a_G Platelet glycoprotein I 99.8 1.4E-20 4.9E-25 188.4 16.4 157 1-171 12-172 (290)
266 4fcg_A Uncharacterized protein 99.8 2.5E-21 8.5E-26 197.6 10.5 162 1-175 83-257 (328)
267 3rfs_A Internalin B, repeat mo 99.8 2.8E-20 9.7E-25 184.6 17.7 175 1-193 43-221 (272)
268 2z66_A Variable lymphocyte rec 99.8 7.2E-21 2.5E-25 192.2 13.5 176 2-191 81-262 (306)
269 2v9t_B SLIT homolog 2 protein 99.8 1.7E-20 5.6E-25 180.1 13.6 149 2-161 14-166 (220)
270 1ozn_A Reticulon 4 receptor; N 99.8 1.3E-20 4.5E-25 188.3 13.0 178 1-192 58-240 (285)
271 3rfs_A Internalin B, repeat mo 99.8 4E-20 1.4E-24 183.5 16.1 155 1-165 65-223 (272)
272 2v70_A SLIT-2, SLIT homolog 2 99.8 1.6E-20 5.4E-25 180.2 12.6 150 2-162 14-168 (220)
273 2o6q_A Variable lymphocyte rec 99.8 4.6E-20 1.6E-24 182.8 15.7 155 1-163 63-221 (270)
274 2o6s_A Variable lymphocyte rec 99.8 5.1E-20 1.7E-24 175.0 13.7 153 2-165 10-166 (208)
275 2xwt_C Thyrotropin receptor; s 99.8 1.9E-20 6.5E-25 182.1 10.2 163 1-173 33-207 (239)
276 1xku_A Decorin; proteoglycan, 99.8 7.4E-20 2.5E-24 186.9 14.7 155 1-160 78-253 (330)
277 2id5_A Lingo-1, leucine rich r 99.8 3.7E-20 1.3E-24 199.0 12.8 80 1-81 82-161 (477)
278 2xot_A Amphoterin-induced prot 99.8 1.9E-20 6.4E-25 193.8 10.0 176 2-192 21-204 (361)
279 2z62_A TOLL-like receptor 4, v 99.8 2.8E-20 9.5E-25 185.0 10.7 158 1-166 30-196 (276)
280 2ft3_A Biglycan; proteoglycan, 99.8 1E-19 3.5E-24 186.0 15.1 180 1-189 56-276 (332)
281 3e6j_A Variable lymphocyte rec 99.8 1.1E-19 3.9E-24 175.3 13.7 151 2-164 22-176 (229)
282 3v47_A TOLL-like receptor 5B a 99.8 9.4E-20 3.2E-24 194.5 14.2 172 1-172 105-372 (455)
283 1p9a_G Platelet glycoprotein I 99.8 1.3E-19 4.5E-24 181.4 14.2 174 1-192 33-210 (290)
284 3zyi_A Leucine-rich repeat-con 99.8 1.1E-19 3.8E-24 193.9 14.2 165 2-172 57-243 (452)
285 3j0a_A TOLL-like receptor 5; m 99.8 3.9E-20 1.3E-24 212.5 10.6 190 1-191 292-561 (844)
286 3zyj_A Leucine-rich repeat-con 99.8 1.5E-19 5E-24 192.3 14.0 168 1-171 66-255 (440)
287 2o6s_A Variable lymphocyte rec 99.8 4.1E-19 1.4E-23 168.7 15.5 157 1-172 30-190 (208)
288 3vq2_A TLR4, TOLL-like recepto 99.8 1E-19 3.5E-24 201.6 12.9 178 1-193 378-561 (606)
289 3oja_B Anopheles plasmodium-re 99.8 1.7E-19 5.6E-24 199.4 12.8 158 1-161 101-292 (597)
290 3o6n_A APL1; leucine-rich repe 99.8 2E-19 6.9E-24 188.1 12.7 158 1-161 95-286 (390)
291 1ziw_A TOLL-like receptor 3; i 99.8 2.2E-19 7.5E-24 201.7 13.8 180 1-192 407-624 (680)
292 1wwl_A Monocyte differentiatio 99.8 2.1E-19 7.1E-24 182.1 11.8 158 1-162 97-289 (312)
293 2z66_A Variable lymphocyte rec 99.8 1.1E-19 3.6E-24 183.6 9.6 163 1-172 30-200 (306)
294 2id5_A Lingo-1, leucine rich r 99.8 2.2E-19 7.5E-24 193.0 12.2 166 1-174 34-203 (477)
295 2z62_A TOLL-like receptor 4, v 99.8 2E-19 6.9E-24 178.7 10.6 158 3-171 11-173 (276)
296 3t6q_A CD180 antigen; protein- 99.8 1.7E-19 6E-24 199.7 10.7 175 2-191 379-561 (606)
297 1zth_A RIO1 serine protein kin 99.8 1.7E-19 6E-24 177.3 9.4 137 273-423 48-219 (258)
298 4glp_A Monocyte differentiatio 99.8 3.2E-19 1.1E-23 180.5 10.6 159 1-162 93-287 (310)
299 3v47_A TOLL-like receptor 5B a 99.8 5.3E-19 1.8E-23 188.6 12.4 157 1-164 214-412 (455)
300 2xot_A Amphoterin-induced prot 99.8 3.4E-19 1.2E-23 184.3 9.9 153 1-161 41-203 (361)
301 3a79_B TLR6, VLRB.59, TOLL-lik 99.8 1.2E-18 4.1E-23 191.2 14.4 156 21-192 350-512 (562)
302 2z7x_B TOLL-like receptor 1, v 99.8 1.2E-18 3.9E-23 189.4 13.8 155 22-192 322-483 (520)
303 1wwl_A Monocyte differentiatio 99.8 1.5E-19 5.3E-24 183.0 6.4 156 1-164 65-245 (312)
304 3o6n_A APL1; leucine-rich repe 99.8 2.3E-18 7.7E-23 180.1 14.4 130 1-138 47-180 (390)
305 1xku_A Decorin; proteoglycan, 99.8 2E-18 6.9E-23 176.1 13.7 166 1-173 54-242 (330)
306 4g8a_A TOLL-like receptor 4; l 99.8 7.6E-19 2.6E-23 195.1 10.7 157 3-170 35-196 (635)
307 4g8a_A TOLL-like receptor 4; l 99.8 9.8E-19 3.3E-23 194.3 11.6 161 1-169 54-223 (635)
308 4ezg_A Putative uncharacterize 99.8 1.7E-18 5.9E-23 163.0 11.4 145 1-161 46-195 (197)
309 2z80_A TOLL-like receptor 2, v 99.8 1.8E-19 6.1E-24 185.8 4.9 157 4-171 36-198 (353)
310 4eco_A Uncharacterized protein 99.8 2.7E-19 9.4E-24 198.9 6.5 150 10-171 194-376 (636)
311 3oja_B Anopheles plasmodium-re 99.8 2.6E-18 8.8E-23 189.8 14.0 130 1-138 53-186 (597)
312 1w8a_A SLIT protein; signaling 99.8 1.4E-18 4.7E-23 162.9 10.0 129 2-161 11-140 (192)
313 2z63_A TOLL-like receptor 4, v 99.8 2.1E-18 7.1E-23 189.4 12.2 178 1-193 349-534 (570)
314 2ft3_A Biglycan; proteoglycan, 99.8 6.2E-18 2.1E-22 172.7 14.5 165 1-173 35-219 (332)
315 2v9t_B SLIT homolog 2 protein 99.7 9.2E-18 3.1E-22 160.9 14.2 150 26-191 13-166 (220)
316 4eco_A Uncharacterized protein 99.7 5.6E-19 1.9E-23 196.4 6.6 173 1-189 208-414 (636)
317 3vq2_A TLR4, TOLL-like recepto 99.7 2.5E-18 8.6E-23 190.3 10.9 174 1-189 352-533 (606)
318 4ecn_A Leucine-rich repeat pro 99.7 3.1E-18 1E-22 194.7 11.4 144 15-170 440-617 (876)
319 3oja_A Leucine-rich immune mol 99.7 3.3E-18 1.1E-22 183.9 11.1 155 1-165 36-209 (487)
320 3t6q_A CD180 antigen; protein- 99.7 6.7E-18 2.3E-22 186.9 13.8 153 1-161 303-463 (606)
321 2wfh_A SLIT homolog 2 protein 99.7 6.4E-18 2.2E-22 158.5 10.9 128 2-161 13-140 (193)
322 2v70_A SLIT-2, SLIT homolog 2 99.7 1.1E-17 3.6E-22 160.4 12.6 131 1-138 34-168 (220)
323 2z81_A CD282 antigen, TOLL-lik 99.7 1.1E-17 3.7E-22 182.9 14.2 178 1-192 312-512 (549)
324 1h6u_A Internalin H; cell adhe 99.7 1.1E-17 3.6E-22 169.1 13.0 145 1-163 43-189 (308)
325 1ziw_A TOLL-like receptor 3; i 99.7 4.7E-18 1.6E-22 190.8 11.4 164 1-172 27-196 (680)
326 4ecn_A Leucine-rich repeat pro 99.7 3.5E-18 1.2E-22 194.3 10.1 172 1-188 450-655 (876)
327 3e6j_A Variable lymphocyte rec 99.7 2.5E-17 8.7E-22 158.8 14.7 151 25-192 20-174 (229)
328 4glp_A Monocyte differentiatio 99.7 9.7E-18 3.3E-22 169.6 12.3 155 1-161 119-308 (310)
329 2z80_A TOLL-like receptor 2, v 99.7 4.6E-18 1.6E-22 175.2 9.4 157 1-165 54-216 (353)
330 3j0a_A TOLL-like receptor 5; m 99.7 1.2E-17 4.1E-22 191.9 13.6 163 1-171 26-198 (844)
331 2z63_A TOLL-like receptor 4, v 99.7 1E-17 3.6E-22 183.8 12.6 156 1-165 375-536 (570)
332 3a79_B TLR6, VLRB.59, TOLL-lik 99.7 1.3E-17 4.5E-22 182.9 13.1 153 1-163 355-513 (562)
333 3o53_A Protein LRIM1, AGAP0063 99.7 6.1E-18 2.1E-22 171.6 9.6 154 1-164 36-208 (317)
334 1h6t_A Internalin B; cell adhe 99.7 1.5E-17 5E-22 166.6 12.1 163 1-189 48-212 (291)
335 2z7x_B TOLL-like receptor 1, v 99.7 7.5E-18 2.6E-22 183.0 10.7 152 1-162 326-483 (520)
336 1h6t_A Internalin B; cell adhe 99.7 1.3E-17 4.3E-22 167.1 11.3 147 1-165 70-218 (291)
337 1xeu_A Internalin C; cellular 99.7 1.6E-17 5.6E-22 163.7 11.8 140 4-162 24-165 (263)
338 1h6u_A Internalin H; cell adhe 99.7 2.6E-17 8.9E-22 166.2 13.3 163 1-189 65-229 (308)
339 2z81_A CD282 antigen, TOLL-lik 99.7 2.6E-18 9E-23 187.8 6.4 153 5-168 11-169 (549)
340 2o6r_A Variable lymphocyte rec 99.7 3.8E-17 1.3E-21 150.9 12.0 132 2-164 10-141 (177)
341 3o53_A Protein LRIM1, AGAP0063 99.7 3.1E-18 1.1E-22 173.8 4.6 165 1-191 82-251 (317)
342 3oja_A Leucine-rich immune mol 99.7 3.7E-18 1.3E-22 183.6 5.4 166 1-192 82-252 (487)
343 4ay9_X Follicle-stimulating ho 99.7 2E-17 6.9E-22 170.2 10.2 170 1-172 32-227 (350)
344 1m9s_A Internalin B; cell inva 99.7 7.9E-17 2.7E-21 176.9 15.1 151 2-163 46-213 (605)
345 1xeu_A Internalin C; cellular 99.7 1.9E-17 6.5E-22 163.2 7.6 146 1-165 43-190 (263)
346 2ell_A Acidic leucine-rich nuc 99.7 4.2E-17 1.4E-21 149.2 8.0 132 23-163 23-163 (168)
347 1m9s_A Internalin B; cell inva 99.7 6E-17 2.1E-21 177.9 10.6 143 4-164 26-170 (605)
348 4fmz_A Internalin; leucine ric 99.7 8.7E-17 3E-21 165.1 10.5 153 1-171 157-311 (347)
349 3bz5_A Internalin-J, INLJ; leu 99.7 5.5E-16 1.9E-20 165.2 16.5 145 1-161 66-226 (457)
350 4gyi_A RIO2 kinase; protein ki 99.7 1.8E-17 6.1E-22 169.6 4.0 136 274-424 97-266 (397)
351 2xwt_C Thyrotropin receptor; s 99.7 1.9E-16 6.4E-21 153.7 10.6 156 1-167 57-225 (239)
352 3cvr_A Invasion plasmid antige 99.7 3.8E-16 1.3E-20 169.8 13.9 65 1-77 61-125 (571)
353 1o6v_A Internalin A; bacterial 99.6 6.7E-16 2.3E-20 165.3 13.2 153 1-164 201-370 (466)
354 2je0_A Acidic leucine-rich nuc 99.6 1E-16 3.6E-21 143.5 5.7 125 23-156 16-149 (149)
355 3cvr_A Invasion plasmid antige 99.6 3.2E-16 1.1E-20 170.3 10.6 153 1-189 82-242 (571)
356 4fmz_A Internalin; leucine ric 99.6 3.1E-16 1.1E-20 161.0 9.8 164 1-188 179-344 (347)
357 1o6v_A Internalin A; bacterial 99.6 7.8E-16 2.7E-20 164.7 12.9 146 2-165 246-393 (466)
358 4b8c_D Glucose-repressible alc 99.6 7.3E-17 2.5E-21 181.5 4.7 139 21-170 221-364 (727)
359 1w8a_A SLIT protein; signaling 99.6 1E-15 3.5E-20 143.3 11.2 112 1-140 31-143 (192)
360 3bz5_A Internalin-J, INLJ; leu 99.6 3.8E-15 1.3E-19 158.7 16.0 141 1-162 44-185 (457)
361 1dce_A Protein (RAB geranylger 99.6 1E-17 3.5E-22 182.8 -5.9 150 1-164 351-550 (567)
362 2wfh_A SLIT homolog 2 protein 99.6 3.5E-15 1.2E-19 139.7 12.1 130 26-192 12-141 (193)
363 4ezg_A Putative uncharacterize 99.6 2.4E-15 8.3E-20 141.3 10.2 125 1-137 68-195 (197)
364 1a9n_A U2A', U2A'; complex (nu 99.6 7.3E-16 2.5E-20 142.1 6.2 126 23-161 18-154 (176)
365 3g06_A SSPH2 (leucine-rich rep 99.6 8.2E-15 2.8E-19 161.2 15.6 32 1-37 83-114 (622)
366 4ay9_X Follicle-stimulating ho 99.6 4.3E-15 1.5E-19 152.7 11.6 154 1-154 56-233 (350)
367 3g06_A SSPH2 (leucine-rich rep 99.6 2.1E-15 7.1E-20 165.9 9.8 152 1-172 103-285 (622)
368 4b8c_D Glucose-repressible alc 99.6 1.1E-15 3.9E-20 171.8 7.0 152 2-167 176-336 (727)
369 2ast_B S-phase kinase-associat 99.6 1.2E-16 4.1E-21 163.3 -1.2 162 1-171 72-247 (336)
370 1jl5_A Outer protein YOPM; leu 99.6 1.8E-14 6E-19 153.4 15.2 119 24-161 131-251 (454)
371 2ca6_A RAN GTPase-activating p 99.6 3.9E-17 1.3E-21 170.4 -5.3 155 1-162 62-259 (386)
372 2ast_B S-phase kinase-associat 99.6 6.7E-17 2.3E-21 165.1 -3.6 150 1-158 95-258 (336)
373 3g39_A Variable lymphocyte rec 99.6 8.7E-15 3E-19 134.0 10.3 104 2-136 12-115 (170)
374 2r9u_A Variable lymphocyte rec 99.6 7.2E-15 2.5E-19 135.1 9.3 103 3-136 16-118 (174)
375 2ca6_A RAN GTPase-activating p 99.6 7.2E-17 2.5E-21 168.4 -4.8 166 1-173 34-246 (386)
376 2o6r_A Variable lymphocyte rec 99.5 1.5E-14 5.2E-19 133.3 10.7 111 1-139 30-140 (177)
377 3goz_A Leucine-rich repeat-con 99.5 4.4E-16 1.5E-20 160.9 -0.1 153 1-161 24-210 (362)
378 2je0_A Acidic leucine-rich nuc 99.5 2E-15 6.7E-20 135.1 3.6 123 46-175 15-144 (149)
379 1jl5_A Outer protein YOPM; leu 99.5 4.9E-14 1.7E-18 149.9 14.9 136 1-161 93-229 (454)
380 3g39_A Variable lymphocyte rec 99.5 2.6E-14 8.8E-19 130.9 11.0 110 25-164 10-119 (170)
381 2ell_A Acidic leucine-rich nuc 99.5 4.4E-15 1.5E-19 135.7 5.7 122 46-175 22-151 (168)
382 1ds9_A Outer arm dynein; leuci 99.5 3.7E-17 1.3E-21 153.9 -9.7 128 24-164 18-157 (198)
383 2r9u_A Variable lymphocyte rec 99.5 4.9E-14 1.7E-18 129.5 11.0 109 26-164 14-122 (174)
384 3goz_A Leucine-rich repeat-con 99.5 6.9E-16 2.4E-20 159.5 -1.9 157 1-165 53-243 (362)
385 1dce_A Protein (RAB geranylger 99.5 2.3E-14 7.8E-19 156.4 9.1 120 25-154 442-567 (567)
386 3sb4_A Hypothetical leucine ri 99.5 5.5E-14 1.9E-18 143.1 10.7 172 1-175 51-301 (329)
387 1a9n_A U2A', U2A'; complex (nu 99.4 1E-13 3.5E-18 127.6 4.9 122 42-173 13-142 (176)
388 2ifg_A High affinity nerve gro 99.4 5E-13 1.7E-17 137.0 9.3 103 3-136 12-116 (347)
389 1z7x_W Ribonuclease inhibitor; 99.4 5.7E-15 2E-19 157.6 -5.7 163 1-171 201-398 (461)
390 1ds9_A Outer arm dynein; leuci 99.4 1.2E-15 4E-20 143.6 -9.9 147 2-161 21-186 (198)
391 3tm0_A Aminoglycoside 3'-phosp 99.4 2.5E-12 8.6E-17 126.3 11.8 148 267-421 9-212 (263)
392 1z7x_W Ribonuclease inhibitor; 99.4 3E-14 1E-18 151.9 -2.5 154 1-162 30-214 (461)
393 2ifg_A High affinity nerve gro 99.3 1.7E-12 5.9E-17 133.0 9.2 105 27-161 11-117 (347)
394 3un9_A NLR family member X1; l 99.2 1E-13 3.5E-18 143.3 -5.7 158 1-165 74-257 (372)
395 3sb4_A Hypothetical leucine ri 99.2 1.2E-11 4.1E-16 125.7 9.3 164 1-175 103-325 (329)
396 1nd4_A Aminoglycoside 3'-phosp 99.2 2.6E-11 8.8E-16 118.6 9.0 140 271-422 19-214 (264)
397 3un9_A NLR family member X1; l 99.1 1.2E-12 4.2E-17 135.2 -6.0 137 1-144 103-260 (372)
398 4fdw_A Leucine rich hypothetic 99.1 6.6E-10 2.2E-14 115.8 11.9 163 1-170 159-345 (401)
399 3ogk_B Coronatine-insensitive 99.0 3.7E-12 1.3E-16 140.2 -6.1 156 1-163 344-529 (592)
400 3ogk_B Coronatine-insensitive 99.0 1.1E-11 3.7E-16 136.4 -3.2 152 1-161 140-307 (592)
401 3dxp_A Putative acyl-COA dehyd 99.0 1.1E-09 3.6E-14 112.7 11.1 143 276-422 42-248 (359)
402 3sg8_A APH(2'')-ID; antibiotic 99.0 2.9E-10 1E-14 114.1 5.3 188 277-476 25-288 (304)
403 4fdw_A Leucine rich hypothetic 99.0 2.3E-09 7.9E-14 111.7 11.3 148 1-160 137-284 (401)
404 2p1m_B Transport inhibitor res 98.8 1.5E-10 5.1E-15 127.3 -3.3 55 23-77 104-161 (594)
405 3r70_A Aminoglycoside phosphot 98.7 8.3E-08 2.8E-12 96.8 13.2 137 273-422 38-237 (320)
406 2ra8_A Uncharacterized protein 98.6 4.2E-09 1.4E-13 107.9 1.1 156 1-161 141-321 (362)
407 2p1m_B Transport inhibitor res 98.6 5.2E-10 1.8E-14 123.0 -6.2 157 1-160 316-494 (594)
408 3tdw_A Gentamicin resistance p 98.5 6.7E-07 2.3E-11 89.5 13.1 137 277-422 24-224 (306)
409 3rw6_A Nuclear RNA export fact 98.4 4.5E-08 1.5E-12 95.2 2.0 17 46-62 168-184 (267)
410 4gkh_A Aminoglycoside 3'-phosp 98.4 2.3E-06 8E-11 83.7 14.4 136 279-422 31-223 (272)
411 3d1u_A Putative fructosamine-3 98.4 8E-07 2.7E-11 88.0 10.0 77 275-355 18-97 (288)
412 3ovc_A Hygromycin-B 4-O-kinase 98.4 9.3E-07 3.2E-11 90.6 10.0 76 275-356 44-122 (362)
413 1io0_A Tropomodulin; LRR prote 98.3 9.3E-08 3.2E-12 88.2 1.1 108 22-136 34-164 (185)
414 3rw6_A Nuclear RNA export fact 98.3 3.1E-07 1.1E-11 89.3 4.7 83 4-96 148-237 (267)
415 1io0_A Tropomodulin; LRR prote 98.3 9.4E-08 3.2E-12 88.2 0.2 116 39-161 27-165 (185)
416 3ats_A Putative uncharacterize 98.3 8.9E-07 3E-11 90.6 6.7 81 276-356 24-121 (357)
417 2ra8_A Uncharacterized protein 98.3 1E-07 3.5E-12 97.6 -0.4 144 1-158 174-341 (362)
418 2q83_A YTAA protein; 2635576, 98.1 1.6E-05 5.5E-10 80.4 11.0 140 277-421 37-251 (346)
419 3jr1_A Putative fructosamine-3 97.9 4.6E-05 1.6E-09 76.0 11.8 138 276-418 40-232 (312)
420 2olc_A MTR kinase, methylthior 97.9 1.9E-05 6.5E-10 81.9 9.3 75 277-353 35-120 (397)
421 4fs7_A Uncharacterized protein 97.8 5.1E-05 1.7E-09 78.6 10.4 161 2-175 188-370 (394)
422 4fs7_A Uncharacterized protein 97.8 9.9E-05 3.4E-09 76.4 12.2 151 11-172 59-209 (394)
423 3f7w_A Putative fructosamine-3 97.8 4.8E-05 1.7E-09 75.1 9.2 79 273-355 16-97 (288)
424 4h09_A Hypothetical leucine ri 97.8 0.00012 4.2E-09 75.2 12.0 134 22-167 215-352 (379)
425 4gt6_A Cell surface protein; l 97.8 3.4E-05 1.2E-09 79.9 7.4 124 25-160 243-370 (394)
426 4h09_A Hypothetical leucine ri 97.7 0.00015 5.2E-09 74.5 10.8 126 11-148 228-357 (379)
427 2pyw_A Uncharacterized protein 97.6 0.00016 5.5E-09 75.5 10.4 80 391-472 231-313 (420)
428 2ppq_A HSK, HK, homoserine kin 97.6 0.00018 6.3E-09 72.0 9.1 157 262-421 7-216 (322)
429 4gt6_A Cell surface protein; l 97.5 0.00039 1.3E-08 71.8 11.5 161 1-175 162-361 (394)
430 3csv_A Aminoglycoside phosphot 97.5 0.00035 1.2E-08 70.4 10.7 141 277-422 23-217 (333)
431 3rfe_A Platelet glycoprotein I 97.5 9E-05 3.1E-09 63.6 5.2 56 3-61 12-68 (130)
432 3dxq_A Choline/ethanolamine ki 97.5 0.00017 5.7E-09 71.6 7.4 129 277-422 23-202 (301)
433 2yle_A Protein spire homolog 1 97.3 0.0011 3.7E-08 61.3 10.2 103 354-475 34-136 (229)
434 1zyl_A Hypothetical protein YI 97.3 0.0033 1.1E-07 62.9 14.3 157 262-422 11-223 (328)
435 1nw1_A Choline kinase (49.2 KD 97.2 0.00033 1.1E-08 73.2 6.1 73 277-355 78-159 (429)
436 3feg_A Choline/ethanolamine ki 97.2 0.0015 5.3E-08 66.8 10.8 141 277-422 55-254 (379)
437 3e4g_A ATP synthase subunit S, 97.1 0.0001 3.6E-09 66.4 0.6 89 14-110 52-150 (176)
438 1pgv_A TMD-1, tropomodulin TMD 97.0 9.5E-05 3.3E-09 67.9 0.1 114 23-159 40-169 (197)
439 3c5i_A Choline kinase; choline 97.0 0.00047 1.6E-08 70.5 5.0 74 277-355 38-121 (369)
440 3e4g_A ATP synthase subunit S, 97.0 0.00024 8.1E-09 64.0 2.3 88 40-134 53-150 (176)
441 3rfe_A Platelet glycoprotein I 97.0 0.00094 3.2E-08 57.2 6.0 57 102-160 11-68 (130)
442 2qg7_A Ethanolamine kinase PV0 96.8 0.0012 4.1E-08 69.4 6.2 74 277-355 113-188 (458)
443 1pgv_A TMD-1, tropomodulin TMD 96.7 0.00032 1.1E-08 64.4 0.8 62 1-63 43-113 (197)
444 3i1a_A Spectinomycin phosphotr 96.7 0.0059 2E-07 61.5 9.9 68 281-355 32-108 (339)
445 3f2s_A CK, chetk-alpha, cholin 96.5 0.0039 1.4E-07 64.0 7.2 141 277-421 57-279 (401)
446 3mes_A Choline kinase; malaria 95.3 0.026 9E-07 58.4 7.3 74 277-355 75-157 (424)
447 3g15_A CK, chetk-alpha, cholin 92.6 0.071 2.4E-06 54.8 3.9 30 393-422 245-280 (401)
448 4ann_A ESSB; membrane protein, 88.9 0.67 2.3E-05 42.6 6.3 117 326-478 43-160 (215)
449 4ano_A ESSB; membrane protein, 84.8 2 6.8E-05 39.6 7.0 115 326-477 48-164 (219)
450 3cxl_A N-chimerin; SH2, RHO-GA 78.4 0.36 1.2E-05 50.5 -0.5 60 275-337 145-213 (463)
451 2jwa_A Receptor tyrosine-prote 67.3 0.99 3.4E-05 29.7 -0.3 6 236-241 33-38 (44)
452 1cja_A Protein (actin-fragmin 62.7 21 0.00072 35.0 8.0 141 273-422 70-237 (342)
453 2lz0_A Uncharacterized protein 58.1 12 0.0004 29.7 4.4 48 109-157 6-53 (100)
454 2x6h_A GH13170P, VPS34, phosph 49.9 2.5E+02 0.0087 30.4 14.6 26 396-421 550-575 (696)
455 2lz0_A Uncharacterized protein 48.8 17 0.00058 28.7 4.0 41 36-77 8-48 (100)
456 3ls8_A Phosphatidylinositol 3- 28.9 5.5E+02 0.019 27.3 14.3 82 331-421 402-501 (614)
No 1
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=7e-56 Score=445.11 Aligned_cols=260 Identities=26% Similarity=0.411 Sum_probs=217.1
Q ss_pred hhccccccccCccCcccEEEEEeC------CCCeEEEEEeehhhHHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceE
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS------DGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKA 344 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 344 (593)
.++|.+.+.||+|+||.||+|++. +++.||||+++.......+.|.+|++++++++|||||+++|++.+++..+
T Consensus 12 r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~ 91 (299)
T 4asz_A 12 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI 91 (299)
T ss_dssp GGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEE
Confidence 367899999999999999999863 47789999998776667788999999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCC------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcE
Q 007680 345 LVLEFMPNGSLEKWLYSHN------------YFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVA 412 (593)
Q Consensus 345 lv~e~~~~gsL~~~l~~~~------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~ 412 (593)
+|||||++|+|.+++...+ ..+++.++..++.||++||+|||+++ |+||||||+|||+++++.+
T Consensus 92 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~----iiHRDlKp~NILl~~~~~~ 167 (299)
T 4asz_A 92 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH----FVHRDLATRNCLVGENLLV 167 (299)
T ss_dssp EEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTT----CCCSCCSGGGEEECGGGCE
T ss_pred EEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC----cccCccCHhhEEECCCCcE
Confidence 9999999999999997643 35999999999999999999999654 9999999999999999999
Q ss_pred EEEeeccceecCCCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccchHHHHHHH
Q 007680 413 HVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRRWVKE 491 (593)
Q Consensus 413 kL~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~ 491 (593)
||+|||+|+...............||+.|||||++.+..|+.++|||||||++|||+| |+.||.+.... .....+..
T Consensus 168 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~--~~~~~i~~ 245 (299)
T 4asz_A 168 KIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN--EVIECITQ 245 (299)
T ss_dssp EECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--HHHHHHHH
T ss_pred EECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHHc
Confidence 9999999987654433333344568999999999999999999999999999999999 89999774321 12222211
Q ss_pred hcCCchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhh
Q 007680 492 SLPHGLTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVK 553 (593)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 553 (593)
.. ..+.+..+++++.+++.+||+.||++|||++|+.+.|+++...
T Consensus 246 ~~-----------------~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~ 290 (299)
T 4asz_A 246 GR-----------------VLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA 290 (299)
T ss_dssp TC-----------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CC-----------------CCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence 11 1112234677899999999999999999999999999988654
No 2
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=3.5e-55 Score=446.06 Aligned_cols=260 Identities=25% Similarity=0.383 Sum_probs=210.5
Q ss_pred hhccccccccCccCcccEEEEEeC------CCCeEEEEEeehhhHHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceE
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS------DGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKA 344 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 344 (593)
.++|.+.++||+|+||.||+|++. +++.||||+++.......+.|.+|++++++++|||||+++|+|.+++..+
T Consensus 40 ~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~ 119 (329)
T 4aoj_A 40 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLL 119 (329)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE
T ss_pred HHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence 357888899999999999999864 47889999998776667788999999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCC--------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCC
Q 007680 345 LVLEFMPNGSLEKWLYSHN--------------YFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENM 410 (593)
Q Consensus 345 lv~e~~~~gsL~~~l~~~~--------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~ 410 (593)
+|||||++|+|.+++.... ..+++.++..|+.||++||+|||++ +|+||||||+|||+++++
T Consensus 120 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~----~iiHRDLKp~NILl~~~~ 195 (329)
T 4aoj_A 120 MVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL----HFVHRDLATRNCLVGQGL 195 (329)
T ss_dssp EEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCCGGGEEEETTT
T ss_pred EEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC----CeecccccHhhEEECCCC
Confidence 9999999999999997643 2589999999999999999999965 499999999999999999
Q ss_pred cEEEEeeccceecCCCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccchHHHHH
Q 007680 411 VAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRRWV 489 (593)
Q Consensus 411 ~~kL~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~ellt-g~~pf~~~~~~~~~~~~~~ 489 (593)
.+||+|||+|+...............||+.|||||++.+..++.++|||||||++|||+| |+.||.+.... .....+
T Consensus 196 ~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~--~~~~~i 273 (329)
T 4aoj_A 196 VVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT--EAIDCI 273 (329)
T ss_dssp EEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHH--HHHHHH
T ss_pred cEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHH--HHHHHH
Confidence 999999999987655443333445679999999999999999999999999999999999 89999774321 112222
Q ss_pred HHhcCCchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhh
Q 007680 490 KESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVK 553 (593)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 553 (593)
.... ..+.+..+++++.+++.+||+.||++|||++||+++|+.+...
T Consensus 274 ~~g~-----------------~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~ 320 (329)
T 4aoj_A 274 TQGR-----------------ELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320 (329)
T ss_dssp HHTC-----------------CCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred HcCC-----------------CCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence 1111 1122334677899999999999999999999999999998654
No 3
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=6.6e-55 Score=438.12 Aligned_cols=265 Identities=25% Similarity=0.408 Sum_probs=209.7
Q ss_pred hhhccccccccCccCcccEEEEEeCCCCeEEEEEeehh--hHHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEEE
Q 007680 270 ATDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQ--LERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVL 347 (593)
Q Consensus 270 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 347 (593)
..+++++.++||+|+||+||+|+++ ..||||+++.. .....+.|.+|++++++++|||||++++++.+ +..++||
T Consensus 34 ~~~~l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVm 110 (307)
T 3omv_A 34 EASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVT 110 (307)
T ss_dssp CTTSCCEEEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEE
T ss_pred cHHHeEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEE
Confidence 3567888999999999999999875 36999998753 24456789999999999999999999998865 5689999
Q ss_pred eccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCCCC
Q 007680 348 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGE 427 (593)
Q Consensus 348 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~ 427 (593)
|||++|+|.+++......+++.++..|+.||++||+|||++ +|+||||||+|||+++++.+||+|||+|+......
T Consensus 111 Ey~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~----~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~ 186 (307)
T 3omv_A 111 QWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAK----NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWS 186 (307)
T ss_dssp ECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHT----TCBCSCCCSSSEEEETTEEEEECCCSSCBC-----
T ss_pred EcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC----CccCCccCHHHEEECCCCcEEEeeccCceecccCC
Confidence 99999999999988776799999999999999999999965 49999999999999999999999999998765443
Q ss_pred CccccccccCCccccCccccCC---CCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhhhh
Q 007680 428 DSVRQTMTMATIGYMAPEYGLE---GIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDAN 504 (593)
Q Consensus 428 ~~~~~~~~~gt~~y~aPE~~~~---~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 504 (593)
.........||+.|||||++.+ +.|+.++|||||||++|||+||+.||.+..... .....+...... +
T Consensus 187 ~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~-~~~~~~~~~~~~-------p- 257 (307)
T 3omv_A 187 GSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD-QIIFMVGRGYAS-------P- 257 (307)
T ss_dssp -------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH-HHHHHHHTTCCC-------C-
T ss_pred cceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHH-HHHHHHhcCCCC-------C-
Confidence 3333455679999999999853 468999999999999999999999997643221 111111111100 0
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhhhc
Q 007680 505 LVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVKFL 555 (593)
Q Consensus 505 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~ 555 (593)
.....+.++++++.+++.+||+.||++|||+.||+++|+.++..+.
T Consensus 258 -----~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~lp 303 (307)
T 3omv_A 258 -----DLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLP 303 (307)
T ss_dssp -----CSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTCC
T ss_pred -----CcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccCC
Confidence 0001123456789999999999999999999999999999876653
No 4
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=1.1e-54 Score=441.87 Aligned_cols=250 Identities=22% Similarity=0.321 Sum_probs=212.3
Q ss_pred hccccccccCccCcccEEEEEeC-CCCeEEEEEeehhhHHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEEEecc
Q 007680 272 DEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVLEFM 350 (593)
Q Consensus 272 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 350 (593)
+.|+..++||+|+||.||+|+++ +|+.||||+++.......+.+.+|+++|++++|||||+++++|.+++..|+|||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 56999999999999999999976 79999999998765555667889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCCCCCcc
Q 007680 351 PNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSV 430 (593)
Q Consensus 351 ~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~ 430 (593)
+||+|.+++...+ +++.++..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+|+.+.....
T Consensus 154 ~gg~L~~~l~~~~--l~e~~~~~~~~qi~~aL~ylH~~~----IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~-- 225 (346)
T 4fih_A 154 EGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLHAQG----VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP-- 225 (346)
T ss_dssp TTEEHHHHHHHSC--CCHHHHHHHHHHHHHHHHHHHHTT----EECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC--
T ss_pred CCCcHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCC----cccccCCHHHEEECCCCCEEEecCcCceecCCCCC--
Confidence 9999999998754 999999999999999999999655 99999999999999999999999999998754332
Q ss_pred ccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhhhhhhhhhh
Q 007680 431 RQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLVREEQ 510 (593)
Q Consensus 431 ~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (593)
.....+||+.|||||++.+..|+.++|||||||++|||++|+.||.+.. .......+....+..
T Consensus 226 ~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~--~~~~~~~i~~~~~~~-------------- 289 (346)
T 4fih_A 226 RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP--PLKAMKMIRDNLPPR-------------- 289 (346)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC--HHHHHHHHHHSSCCC--------------
T ss_pred cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC--HHHHHHHHHcCCCCC--------------
Confidence 2345689999999999999999999999999999999999999997632 112222222221111
Q ss_pred hhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 511 AFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 511 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
......+++++.+|+.+||+.||++|||++|+++|
T Consensus 290 -~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 290 -LKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp -CSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred -CCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 11122346688999999999999999999999876
No 5
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=7.1e-55 Score=439.68 Aligned_cols=256 Identities=23% Similarity=0.406 Sum_probs=212.5
Q ss_pred hccccccccCccCcccEEEEEeC------CCCeEEEEEeehhh-HHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceE
Q 007680 272 DEFNECNLLGTSSFGSVYKGTIS------DGTDVAIKVFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKA 344 (593)
Q Consensus 272 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 344 (593)
+++++.++||+|+||.||+|++. +++.||||+++... ....+.|.+|+.++++++|||||+++|+|.+++..+
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~ 105 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLS 105 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEE
Confidence 45778899999999999999863 46789999997543 334578999999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCC---------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCC
Q 007680 345 LVLEFMPNGSLEKWLYSHN---------------YFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDEN 409 (593)
Q Consensus 345 lv~e~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~ 409 (593)
+|||||++|+|.+++.... ..+++.++..|+.||++||+|||+++ |+||||||+|||++++
T Consensus 106 lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~----iiHRDLK~~NILl~~~ 181 (308)
T 4gt4_A 106 MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH----VVHKDLATRNVLVYDK 181 (308)
T ss_dssp EEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTT----CCCSCCSGGGEEECGG
T ss_pred EEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC----CCCCCccccceEECCC
Confidence 9999999999999996532 25899999999999999999999654 9999999999999999
Q ss_pred CcEEEEeeccceecCCCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccchHHHH
Q 007680 410 MVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRRW 488 (593)
Q Consensus 410 ~~~kL~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~ellt-g~~pf~~~~~~~~~~~~~ 488 (593)
+.+||+|||+|+...............||+.|||||++.++.|+.++|||||||++|||+| |+.||.+.... .+...
T Consensus 182 ~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~--~~~~~ 259 (308)
T 4gt4_A 182 LNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ--DVVEM 259 (308)
T ss_dssp GCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHH--HHHHH
T ss_pred CCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHH--HHHHH
Confidence 9999999999987654433333445679999999999999999999999999999999999 89999774321 22222
Q ss_pred HHHhcCCchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHh
Q 007680 489 VKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKI 550 (593)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 550 (593)
+... ...+.+.++++++.+++.+||+.||++|||++||+++|+..
T Consensus 260 i~~~-----------------~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 260 IRNR-----------------QVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp HHTT-----------------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred HHcC-----------------CCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 2111 11122345678899999999999999999999999999864
No 6
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=2.3e-54 Score=440.33 Aligned_cols=251 Identities=21% Similarity=0.334 Sum_probs=204.5
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehh--hHHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEEE
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQ--LERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVL 347 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 347 (593)
.++|++++.||+|+||.||+|++. +|+.||||+++.. .....+.+.+|++++++++|||||++++++++++..|+||
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVm 102 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVM 102 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence 368999999999999999999975 7999999999764 2445678999999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCC-CCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCCC
Q 007680 348 EFMPNGSLEKWLYSHNY-FLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEG 426 (593)
Q Consensus 348 e~~~~gsL~~~l~~~~~-~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~ 426 (593)
|||+||+|.+++...+. .+++.++..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+|+.+...
T Consensus 103 Ey~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~----IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 178 (350)
T 4b9d_A 103 DYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRK----ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST 178 (350)
T ss_dssp ECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT----CEETTCCGGGEEECTTCCEEECSTTEESCCCHH
T ss_pred eCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCC----eeeccCCHHHEEECCCCCEEEcccccceeecCC
Confidence 99999999999976544 5799999999999999999999655 999999999999999999999999999876432
Q ss_pred CCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhhhhhh
Q 007680 427 EDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLV 506 (593)
Q Consensus 427 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (593)
. ......+||+.|||||++.+..|+.++|||||||++|||+||+.||......+ .+.+......+
T Consensus 179 ~--~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~-~~~~i~~~~~~------------ 243 (350)
T 4b9d_A 179 V--ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKN-LVLKIISGSFP------------ 243 (350)
T ss_dssp H--HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHTCCC------------
T ss_pred c--ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH-HHHHHHcCCCC------------
Confidence 1 12234579999999999999999999999999999999999999997632111 11111111111
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 507 REEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 507 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
+.+..+++++.+|+.+||+.||++|||++|+++|
T Consensus 244 ------~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 244 ------PVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp ------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ------CCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 1112345688999999999999999999999986
No 7
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=3.3e-54 Score=432.04 Aligned_cols=251 Identities=22% Similarity=0.299 Sum_probs=212.3
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhh---HHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEE
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALV 346 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 346 (593)
.++|++.+.||+|+||+||+|+.. +|+.||||++++.. ....+.+.+|++++++++|||||++++++++.+..|+|
T Consensus 31 ~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yiv 110 (311)
T 4aw0_A 31 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG 110 (311)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 367999999999999999999975 79999999998653 33456789999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCCC
Q 007680 347 LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEG 426 (593)
Q Consensus 347 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~ 426 (593)
||||+||+|.+++.+.+. +++.++..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+|+.+...
T Consensus 111 mEy~~gG~L~~~i~~~~~-l~e~~~~~~~~qi~~al~ylH~~~----IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~ 185 (311)
T 4aw0_A 111 LSYAKNGELLKYIRKIGS-FDETCTRFYTAEIVSALEYLHGKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 185 (311)
T ss_dssp ECCCTTEEHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHTT----EECSCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EecCCCCCHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCC----CccCCCCHHHeEEcCCCCEEEEEcCCceecCCC
Confidence 999999999999987654 999999999999999999999655 999999999999999999999999999987654
Q ss_pred CCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhhhhhh
Q 007680 427 EDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLV 506 (593)
Q Consensus 427 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (593)
.........+||+.|||||++.+..|+.++||||+||++|||+||+.||..... ......+....
T Consensus 186 ~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~--~~~~~~i~~~~------------- 250 (311)
T 4aw0_A 186 SKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE--GLIFAKIIKLE------------- 250 (311)
T ss_dssp TTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHTC-------------
T ss_pred CCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHcCC-------------
Confidence 444444567899999999999999999999999999999999999999976321 11111111110
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 507 REEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 507 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
. ..+..+++++.+|+.+||+.||++|||++|++.+
T Consensus 251 ---~--~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~~ 285 (311)
T 4aw0_A 251 ---Y--DFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGY 285 (311)
T ss_dssp ---C--CCCTTCCHHHHHHHHHHSCSSGGGSTTSGGGTCH
T ss_pred ---C--CCCcccCHHHHHHHHHHccCCHhHCcChHHHcCC
Confidence 0 0112345678999999999999999999998654
No 8
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=7.7e-54 Score=434.50 Aligned_cols=257 Identities=20% Similarity=0.235 Sum_probs=210.2
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhhHHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEEEec
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVLEF 349 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 349 (593)
.+.|++.++||+|+||.||+|+++ +|+.||||+++.... ..+|+.++++++|||||++++++.+++..|+||||
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 131 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL 131 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence 457889999999999999999975 799999999986532 24699999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCC-cEEEEeeccceecCCCCC
Q 007680 350 MPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENM-VAHVSDFGIYKLLGEGED 428 (593)
Q Consensus 350 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~-~~kL~Dfg~a~~~~~~~~ 428 (593)
|+||+|.+++.+.+. +++.++..++.||+.||+|||++ +|+||||||+|||++.++ .+||+|||+|+.+.....
T Consensus 132 ~~gg~L~~~l~~~~~-l~e~~~~~~~~qi~~aL~ylH~~----~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~ 206 (336)
T 4g3f_A 132 LEGGSLGQLIKQMGC-LPEDRALYYLGQALEGLEYLHTR----RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGL 206 (336)
T ss_dssp CTTCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHTT----TEECSCCCGGGEEECTTSCCEEECCCTTCEEC-----
T ss_pred cCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHC----CceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCc
Confidence 999999999987654 99999999999999999999954 599999999999999987 699999999998764332
Q ss_pred c---cccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhhhhh
Q 007680 429 S---VRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANL 505 (593)
Q Consensus 429 ~---~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 505 (593)
. ......+||+.|||||++.+..|+.++|||||||++|||+||+.||.+....+. +..... ..+
T Consensus 207 ~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~-~~~i~~-~~~----------- 273 (336)
T 4g3f_A 207 GKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPL-CLKIAS-EPP----------- 273 (336)
T ss_dssp -------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCC-HHHHHH-SCC-----------
T ss_pred ccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH-HHHHHc-CCC-----------
Confidence 1 122345799999999999999999999999999999999999999976433221 111111 000
Q ss_pred hhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhhh
Q 007680 506 VREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVKF 554 (593)
Q Consensus 506 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 554 (593)
.....+..+++++.+++.+||+.||++|||+.|++++|.......
T Consensus 274 ----~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~ 318 (336)
T 4g3f_A 274 ----PIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEV 318 (336)
T ss_dssp ----GGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred ----CchhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhh
Confidence 001112345678899999999999999999999999998876554
No 9
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=2.2e-53 Score=442.88 Aligned_cols=250 Identities=22% Similarity=0.321 Sum_probs=211.9
Q ss_pred hccccccccCccCcccEEEEEeC-CCCeEEEEEeehhhHHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEEEecc
Q 007680 272 DEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVLEFM 350 (593)
Q Consensus 272 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 350 (593)
+.|++.++||+|+||.||+|+++ +|+.||||++........+.+.+|+.+|++++|||||+++++|.+++..|+|||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~ 230 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence 56999999999999999999975 79999999998765555567899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCCCCCcc
Q 007680 351 PNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSV 430 (593)
Q Consensus 351 ~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~ 430 (593)
+||+|.+++...+ +++.++..++.||+.||+|||+++ |+||||||+|||++.+|.+||+|||+|+.+.....
T Consensus 231 ~gG~L~~~i~~~~--l~e~~~~~~~~qil~aL~ylH~~~----IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~-- 302 (423)
T 4fie_A 231 EGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLHAQG----VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP-- 302 (423)
T ss_dssp TTEEHHHHHHHSC--CCHHHHHHHHHHHHHHHHHHHHTT----EECCCCSTTTEEECTTCCEEECCCTTCEECCSSCC--
T ss_pred CCCcHHHHHhccC--CCHHHHHHHHHHHHHHHHHHHHCC----eecccCCHHHEEEcCCCCEEEecCccceECCCCCc--
Confidence 9999999997654 999999999999999999999655 99999999999999999999999999998754332
Q ss_pred ccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhhhhhhhhhh
Q 007680 431 RQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLVREEQ 510 (593)
Q Consensus 431 ~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (593)
.....+||+.|||||++.+..|+.++|||||||++|||++|+.||.+.. .......+....+..
T Consensus 303 ~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~--~~~~~~~i~~~~~~~-------------- 366 (423)
T 4fie_A 303 RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP--PLKAMKMIRDNLPPR-------------- 366 (423)
T ss_dssp CBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC--HHHHHHHHHHSCCCC--------------
T ss_pred cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC--HHHHHHHHHcCCCCC--------------
Confidence 2345679999999999999999999999999999999999999997632 122222222221111
Q ss_pred hhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 511 AFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 511 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
......+++++.+|+.+||..||++|||+.|+++|
T Consensus 367 -~~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 367 -LKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp -CSCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred -CcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 11112345688999999999999999999999876
No 10
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=1.4e-52 Score=418.22 Aligned_cols=247 Identities=24% Similarity=0.348 Sum_probs=198.8
Q ss_pred ccccccCccCcccEEEEEeC-CCCeEEEEEeehhh--HHHHHHHHHHHHHHhhcCCCCcceeeeeeec----CCceEEEE
Q 007680 275 NECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSYSN----PDFKALVL 347 (593)
Q Consensus 275 ~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lv~ 347 (593)
++.++||+|+||+||+|.+. +++.||+|++.... ....+.+.+|++++++++|||||+++++|.+ .+..|+||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 56678999999999999975 68999999997642 4456789999999999999999999999865 34689999
Q ss_pred eccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCC-CCcEEEEeeccceecCCC
Q 007680 348 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDE-NMVAHVSDFGIYKLLGEG 426 (593)
Q Consensus 348 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~-~~~~kL~Dfg~a~~~~~~ 426 (593)
|||+||+|.+++.+... +++..+..++.||+.||+|||+++ .+|+||||||+|||++. ++.+||+|||+|+.....
T Consensus 109 Ey~~gg~L~~~l~~~~~-l~~~~~~~~~~qi~~aL~ylH~~~--~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~ 185 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRFKV-MKIKVLRSWCRQILKGLQFLHTRT--PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS 185 (290)
T ss_dssp ECCCSCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHTSS--SCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTT
T ss_pred eCCCCCCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCC--CCEEecccChhheeEECCCCCEEEEeCcCCEeCCCC
Confidence 99999999999987654 999999999999999999999643 24999999999999984 789999999999864322
Q ss_pred CCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhhhhhh
Q 007680 427 EDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLV 506 (593)
Q Consensus 427 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (593)
.....+||+.|||||++.+ .|+.++|||||||++|||+||+.||.+..... .+...+.....
T Consensus 186 ----~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~-~~~~~i~~~~~------------ 247 (290)
T 3fpq_A 186 ----FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAA-QIYRRVTSGVK------------ 247 (290)
T ss_dssp ----SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHH-HHHHHHTTTCC------------
T ss_pred ----ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHH-HHHHHHHcCCC------------
Confidence 2344679999999998865 69999999999999999999999997532211 11111111100
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 507 REEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 507 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
....+..+++++.+|+.+||+.||++|||++|+++|
T Consensus 248 ----~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~H 283 (290)
T 3fpq_A 248 ----PASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp ----CGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ----CCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 001112234578999999999999999999999875
No 11
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.4e-52 Score=414.55 Aligned_cols=246 Identities=25% Similarity=0.384 Sum_probs=193.2
Q ss_pred hccccccccCccCcccEEEEEeC-CCCeEEEEEeehhh---HHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEEE
Q 007680 272 DEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVL 347 (593)
Q Consensus 272 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 347 (593)
++|++.+.||+|+||.||+|+.. +|+.||+|+++... ......+.+|++++++++||||+++++++.+++..|+||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 68999999999999999999965 79999999997542 334567899999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCCCC
Q 007680 348 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGE 427 (593)
Q Consensus 348 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~ 427 (593)
||+ +|+|.+++.+.+. +++.++..++.||+.||+|||+++ |+||||||+|||+++++.+||+|||+|+......
T Consensus 93 Ey~-~g~L~~~l~~~~~-l~e~~~~~~~~qi~~al~ylH~~~----IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~ 166 (275)
T 3hyh_A 93 EYA-GNELFDYIVQRDK-MSEQEARRFFQQIISAVEYCHRHK----IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166 (275)
T ss_dssp ECC-CEEHHHHHHHSCS-CCHHHHHHHHHHHHHHHHHHHHTT----CCCCCCCTTTEEECTTCCEEECCSSCC-------
T ss_pred eCC-CCCHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCC----cccccCChHHeEECCCCCEEEeecCCCeecCCCC
Confidence 999 6899999987665 999999999999999999999655 9999999999999999999999999998765432
Q ss_pred CccccccccCCccccCccccCCCCC-CccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhhhhhh
Q 007680 428 DSVRQTMTMATIGYMAPEYGLEGIV-SAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLV 506 (593)
Q Consensus 428 ~~~~~~~~~gt~~y~aPE~~~~~~~-s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (593)
......||+.|||||++.+..+ +.++||||+||++|||+||+.||.+... ....+.+....+
T Consensus 167 ---~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~--~~~~~~i~~~~~------------ 229 (275)
T 3hyh_A 167 ---FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI--PVLFKNISNGVY------------ 229 (275)
T ss_dssp -----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHTCC------------
T ss_pred ---ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCH--HHHHHHHHcCCC------------
Confidence 2234679999999999988876 6899999999999999999999976321 111111111110
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 507 REEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 507 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
..+..+++++.+++.+||+.||++|||++|+++|
T Consensus 230 ------~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 230 ------TLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp ------CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred ------CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 0112245678999999999999999999999986
No 12
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=1e-52 Score=431.31 Aligned_cols=267 Identities=26% Similarity=0.403 Sum_probs=219.4
Q ss_pred HHHHHhhhccccccccCccCcccEEEEEeCC------CCeEEEEEeehhh-HHHHHHHHHHHHHHhhcCC-CCcceeeee
Q 007680 265 LDIQRATDEFNECNLLGTSSFGSVYKGTISD------GTDVAIKVFNLQL-ERAFRSFDSECEVLRNVRH-RNLIKILSS 336 (593)
Q Consensus 265 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h-~niv~l~~~ 336 (593)
.+++...++|++.+.||+|+||.||+|++.. ++.||||.++... ....+.+.+|++++.+++| ||||+++|+
T Consensus 57 ~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~ 136 (353)
T 4ase_A 57 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGA 136 (353)
T ss_dssp HHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred cccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEE
Confidence 4455567899999999999999999998642 3579999997653 3445779999999999965 899999999
Q ss_pred eecC-CceEEEEeccCCCCHHHHHhhCC---------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCC
Q 007680 337 YSNP-DFKALVLEFMPNGSLEKWLYSHN---------------YFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLK 400 (593)
Q Consensus 337 ~~~~-~~~~lv~e~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlk 400 (593)
|.+. +..++|||||++|+|.++++... ..+++.++..++.||++||+|||+++ |+|||||
T Consensus 137 ~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~----iiHRDLK 212 (353)
T 4ase_A 137 CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK----CIHRDLA 212 (353)
T ss_dssp ECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTT----CCCSCCS
T ss_pred EEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCC----eecCccC
Confidence 8764 56899999999999999997642 24899999999999999999999654 9999999
Q ss_pred CCCeeeCCCCcEEEEeeccceecCCCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHh-CCCCCCccc
Q 007680 401 PTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMF 479 (593)
Q Consensus 401 p~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~ellt-g~~pf~~~~ 479 (593)
|+|||+++++.+||+|||+|+.+.............||+.|||||++.+..|+.++|||||||++|||+| |+.||.+..
T Consensus 213 ~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~ 292 (353)
T 4ase_A 213 ARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 292 (353)
T ss_dssp GGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred ccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCC
Confidence 9999999999999999999998766554444555679999999999999999999999999999999998 999997743
Q ss_pred cccchHHHHHHHhcCCchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhh
Q 007680 480 IGEMSLRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVK 553 (593)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 553 (593)
..+ .+.+.+.... ..+.+..+++++.+++.+||+.||++|||++|++++|+++...
T Consensus 293 ~~~-~~~~~i~~g~-----------------~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~ 348 (353)
T 4ase_A 293 IDE-EFCRRLKEGT-----------------RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 348 (353)
T ss_dssp CSH-HHHHHHHHTC-----------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHH-HHHHHHHcCC-----------------CCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHH
Confidence 222 1222222111 1122234567899999999999999999999999999998654
No 13
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.4e-52 Score=423.67 Aligned_cols=275 Identities=20% Similarity=0.282 Sum_probs=204.9
Q ss_pred hccccccccCccCcccEEEEEeCCCCeEEEEEeehhhHHHHHHHHHHHHHHhhcCCCCcceeeeeeecCC----ceEEEE
Q 007680 272 DEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPD----FKALVL 347 (593)
Q Consensus 272 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~~lv~ 347 (593)
.+|.+.++||+|+||+||+|++ +|+.||||+++..... ....+.|+..+.+++|||||++++++.+++ ..++||
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~-~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~ 80 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchh-hHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEe
Confidence 4688889999999999999998 5899999999765432 223345677777899999999999997654 579999
Q ss_pred eccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcC----CCCCeEecCCCCCCeeeCCCCcEEEEeeccceec
Q 007680 348 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGH----SSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLL 423 (593)
Q Consensus 348 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~----~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~ 423 (593)
|||++|+|.++++... +++..+.+++.|+++||+|||++. .+.+|+||||||+|||+++++.+||+|||+|+..
T Consensus 81 Ey~~~gsL~~~l~~~~--l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~ 158 (303)
T 3hmm_A 81 DYHEHGSLFDYLNRYT--VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 158 (303)
T ss_dssp ECCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred cCCCCCcHHHHHHhCC--CCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccc
Confidence 9999999999998765 899999999999999999999651 1347999999999999999999999999999887
Q ss_pred CCCCCcc--ccccccCCccccCccccCCC------CCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCC
Q 007680 424 GEGEDSV--RQTMTMATIGYMAPEYGLEG------IVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPH 495 (593)
Q Consensus 424 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 495 (593)
....... ......||+.|||||++.+. .++.++|||||||++|||+||.+||.........+..+... ..
T Consensus 159 ~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~--~~ 236 (303)
T 3hmm_A 159 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPS--DP 236 (303)
T ss_dssp ETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCS--SC
T ss_pred cCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccc--cc
Confidence 5543322 22345799999999998754 46789999999999999999988875432211111000000 00
Q ss_pred chhh----hhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhh
Q 007680 496 GLTE----VVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKV 552 (593)
Q Consensus 496 ~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 552 (593)
...+ +.+..+...........+++..+.+++.+||+.||++|||+.||++.|+++..
T Consensus 237 ~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~ 297 (303)
T 3hmm_A 237 SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297 (303)
T ss_dssp CHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHH
Confidence 0000 01111111111111223456788999999999999999999999999998864
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=1.2e-52 Score=420.65 Aligned_cols=248 Identities=24% Similarity=0.260 Sum_probs=197.9
Q ss_pred hccccccccCccCcccEEEEEeC----CCCeEEEEEeehhh--HHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEE
Q 007680 272 DEFNECNLLGTSSFGSVYKGTIS----DGTDVAIKVFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKAL 345 (593)
Q Consensus 272 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 345 (593)
++|++.+.||+|+||+||+|+.. +++.||+|+++... ......+.+|++++++++|||||++++++.+++..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 67999999999999999999863 47889999997542 2223467889999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCC
Q 007680 346 VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGE 425 (593)
Q Consensus 346 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~ 425 (593)
|||||+||+|.+++.+.+. +++.++..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+|+....
T Consensus 104 vmEy~~gg~L~~~l~~~~~-l~e~~~~~~~~qi~~aL~ylH~~~----IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 178 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEVM-FTEEDVKFYLAELALALDHLHSLG----IIYRDLKPENILLDEEGHIKLTDFGLSKESID 178 (304)
T ss_dssp EECCCTTCEEHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHHTT----CCCSSCCGGGEEECTTSCEEEESSEEEEC---
T ss_pred EEEcCCCCCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCC----CcCCCCCHHHeEEcCCCCEEecccccceeccC
Confidence 9999999999999987664 999999999999999999999655 99999999999999999999999999986543
Q ss_pred CCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhhhhh
Q 007680 426 GEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANL 505 (593)
Q Consensus 426 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 505 (593)
... .....+||+.|||||++.+..|+.++||||+||++|||+||+.||.+.... .....+....+
T Consensus 179 ~~~--~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~--~~~~~i~~~~~----------- 243 (304)
T 3ubd_A 179 HEK--KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRK--ETMTMILKAKL----------- 243 (304)
T ss_dssp --C--CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHCCC-----------
T ss_pred CCc--cccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHH--HHHHHHHcCCC-----------
Confidence 322 234467999999999999999999999999999999999999999763211 11111111100
Q ss_pred hhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCH-----HHHHHH
Q 007680 506 VREEQAFSAKMDCILSIMDFALDCCMESPDMRINM-----TDAAAK 546 (593)
Q Consensus 506 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~-----~evl~~ 546 (593)
..+..+++++.+|+.+||+.||++|||+ +|+++|
T Consensus 244 -------~~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~H 282 (304)
T 3ubd_A 244 -------GMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRH 282 (304)
T ss_dssp -------CCCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTS
T ss_pred -------CCCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcC
Confidence 1112346688999999999999999985 566654
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=8.9e-51 Score=408.63 Aligned_cols=251 Identities=23% Similarity=0.360 Sum_probs=191.1
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhh-HHHHHHHHHHHHHHhhcCCCCcceeeeeeecCC-------
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSYSNPD------- 341 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------- 341 (593)
.++|++++.||+|+||.||+|+++ +|+.||||+++... ....+.+.+|++++++++|||||+++++|.+.+
T Consensus 4 l~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~ 83 (299)
T 4g31_A 4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQP 83 (299)
T ss_dssp HHHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-------
T ss_pred chhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccc
Confidence 457999999999999999999975 79999999997543 344567899999999999999999999987544
Q ss_pred -----ceEEEEeccCCCCHHHHHhhCCC--CCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEE
Q 007680 342 -----FKALVLEFMPNGSLEKWLYSHNY--FLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHV 414 (593)
Q Consensus 342 -----~~~lv~e~~~~gsL~~~l~~~~~--~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL 414 (593)
..|+|||||++|+|.+++..... ..++..+..++.||++||+|||+++ |+||||||+|||++.++.+||
T Consensus 84 ~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~----IiHRDlKp~NILl~~~~~vKl 159 (299)
T 4g31_A 84 SSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKG----LMHRDLKPSNIFFTMDDVVKV 159 (299)
T ss_dssp ---CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTT----CCCCCCCGGGEEECTTCCEEE
T ss_pred cCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCc----CccccCcHHHeEECCCCcEEE
Confidence 36899999999999999987654 3566778999999999999999655 999999999999999999999
Q ss_pred EeeccceecCCCCCc----------cccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccch
Q 007680 415 SDFGIYKLLGEGEDS----------VRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMS 484 (593)
Q Consensus 415 ~Dfg~a~~~~~~~~~----------~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~ 484 (593)
+|||+|+.+...... ...+..+||+.|||||++.+..|+.++|||||||++|||++ ||.....
T Consensus 160 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~---- 232 (299)
T 4g31_A 160 GDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQME---- 232 (299)
T ss_dssp CCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHH----
T ss_pred ccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccH----
Confidence 999999887543321 11234579999999999999999999999999999999996 7754211
Q ss_pred HHHHHHHhcCCchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 485 LRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 485 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
....... +..... .+.....++...+|+.+||+.||++|||+.|+++|
T Consensus 233 ~~~~~~~--------~~~~~~------p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 280 (299)
T 4g31_A 233 RVRTLTD--------VRNLKF------PPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN 280 (299)
T ss_dssp HHHHHHH--------HHTTCC------CHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHHHH--------HhcCCC------CCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1111100 000000 01122334567889999999999999999999875
No 16
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.7e-48 Score=405.27 Aligned_cols=267 Identities=23% Similarity=0.290 Sum_probs=203.1
Q ss_pred hccccccccCccCcccEEEEEeC-CCCeEEEEEeehhh--HHHHHHHHHHHHHHhhcCCCCcceeeeeeec------CCc
Q 007680 272 DEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSYSN------PDF 342 (593)
Q Consensus 272 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~~~ 342 (593)
++|++++.||+|+||+||+|++. +|+.||||+++... ....+.+.+|+++|++++|||||++++++.. .+.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 57999999999999999999975 79999999997542 3445678899999999999999999998754 367
Q ss_pred eEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeecccee
Q 007680 343 KALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKL 422 (593)
Q Consensus 343 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~ 422 (593)
.|+|||||+ |+|.+++...+ .+++.++..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+|+.
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~~-~l~~~~~~~~~~qil~al~ylH~~~----iiHRDlKP~NIl~~~~~~~Ki~DFGla~~ 207 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSSQ-PLTLEHVRYFLYQLLRGLKYMHSAQ----VIHRDLKPSNLLVNENCELKIGDFGMARG 207 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSSS-CCCHHHHHHHHHHHHHHHHHHHHTT----CBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred EEEEEeCCC-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCc----CcCCCcCccccccCCCCCEEEeecceeee
Confidence 899999995 68999998765 4999999999999999999999655 99999999999999999999999999987
Q ss_pred cCCCCC--ccccccccCCccccCccccCCC-CCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhc--CC-c
Q 007680 423 LGEGED--SVRQTMTMATIGYMAPEYGLEG-IVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESL--PH-G 496 (593)
Q Consensus 423 ~~~~~~--~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~--~~-~ 496 (593)
+..... .......+||+.|||||++.+. .++.++||||+||++|||++|++||.+... ......+.... +. .
T Consensus 208 ~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~--~~~l~~I~~~~g~p~~~ 285 (398)
T 4b99_A 208 LCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNY--VHQLQLIMMVLGTPSPA 285 (398)
T ss_dssp C-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSH--HHHHHHHHHHHCCCCGG
T ss_pred cccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCH--HHHHHHHHHhcCCCChH
Confidence 654321 1223456899999999998775 579999999999999999999999976322 11111111111 11 0
Q ss_pred hhhhhhhhhhhh---------hhh-hhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 497 LTEVVDANLVRE---------EQA-FSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 497 ~~~~~~~~~~~~---------~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
....+....... ... .......++++.+|+.+||..||++|||+.|+++|
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 286 VIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp GTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred HhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 000000000000 000 00011235678999999999999999999999987
No 17
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=4.7e-48 Score=399.26 Aligned_cols=267 Identities=19% Similarity=0.240 Sum_probs=201.5
Q ss_pred hhhccccccccCccCcccEEEEEeC----CCCeEEEEEeehhhHHHHHHHHHHHHHHhhc-CCCCcceeeeeeecCCceE
Q 007680 270 ATDEFNECNLLGTSSFGSVYKGTIS----DGTDVAIKVFNLQLERAFRSFDSECEVLRNV-RHRNLIKILSSYSNPDFKA 344 (593)
Q Consensus 270 ~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 344 (593)
..++|++.++||+|+||+||+|+.+ +++.||+|.+..... ...+.+|+++++.+ +||||+++++++.+.++.|
T Consensus 19 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~--~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~ 96 (361)
T 4f9c_A 19 LSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSH--PIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVV 96 (361)
T ss_dssp GGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSC--HHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEE
T ss_pred ccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccC--HHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEE
Confidence 4678999999999999999999853 478899999876532 34678899999998 6999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCC-CcEEEEeeccceec
Q 007680 345 LVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDEN-MVAHVSDFGIYKLL 423 (593)
Q Consensus 345 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~-~~~kL~Dfg~a~~~ 423 (593)
+||||+++|+|.+++.. +++.++..++.|++.||+|||+++ |+||||||+|||++.+ +.+||+|||+|+..
T Consensus 97 lvmE~~~g~~L~~~~~~----l~~~~~~~~~~qll~al~ylH~~g----IiHRDiKPeNiLl~~~~~~~kl~DFGla~~~ 168 (361)
T 4f9c_A 97 IAMPYLEHESFLDILNS----LSFQEVREYMLNLFKALKRIHQFG----IVHRDVKPSNFLYNRRLKKYALVDFGLAQGT 168 (361)
T ss_dssp EEEECCCCCCHHHHHTT----CCHHHHHHHHHHHHHHHHHHHHTT----EECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred EEEeCCCcccHHHHHcC----CCHHHHHHHHHHHHHHHHHHHHCC----eEeCcCCHHHeEEeCCCCeEEECcCCCCccc
Confidence 99999999999999842 899999999999999999999655 9999999999999876 79999999999876
Q ss_pred CCCCCc--------------------------cccccccCCccccCccccCCC-CCCccchHHHHHHHHHHHHhCCCCCC
Q 007680 424 GEGEDS--------------------------VRQTMTMATIGYMAPEYGLEG-IVSAKCDVYSYGVLLMETFTRKRPTD 476 (593)
Q Consensus 424 ~~~~~~--------------------------~~~~~~~gt~~y~aPE~~~~~-~~s~~~DvwSlGvvl~elltg~~pf~ 476 (593)
...... ......+||+.|+|||++.+. .|+.++||||+||++|||++|+.||.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~ 248 (361)
T 4f9c_A 169 HDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFY 248 (361)
T ss_dssp TTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSS
T ss_pred CCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCC
Confidence 433211 012335799999999998775 48999999999999999999999996
Q ss_pred ccccccchHHHHHHHh---------------------cCCc-hhhhhhhh-------------hhhhhhhhhhhHHHHHH
Q 007680 477 EMFIGEMSLRRWVKES---------------------LPHG-LTEVVDAN-------------LVREEQAFSAKMDCILS 521 (593)
Q Consensus 477 ~~~~~~~~~~~~~~~~---------------------~~~~-~~~~~~~~-------------~~~~~~~~~~~~~~~~~ 521 (593)
....+...+.....-. .+.. ........ ........+.....+++
T Consensus 249 ~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~ 328 (361)
T 4f9c_A 249 KASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDE 328 (361)
T ss_dssp CCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCHH
T ss_pred CCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCHH
Confidence 5433222222111100 0000 00000000 00000011112234567
Q ss_pred HHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 522 IMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 522 l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
+.+|+.+||+.||++|||++|+++|
T Consensus 329 a~DLl~~lL~~dP~~R~ta~eaL~H 353 (361)
T 4f9c_A 329 AYDLLDKLLDLNPASRITAEEALLH 353 (361)
T ss_dssp HHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred HHHHHHHHCcCChhHCcCHHHHhcC
Confidence 8999999999999999999999876
No 18
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=2.9e-47 Score=416.64 Aligned_cols=253 Identities=23% Similarity=0.276 Sum_probs=212.5
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhhHHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEEEec
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVLEF 349 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 349 (593)
.++|++.+.||+|+||.||+|+.+ +|+.||+|++........+.+.+|+++|+.++||||++++++|.+.+..|+||||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~ 235 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 235 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence 468999999999999999999975 7999999999876656667889999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCC--CcEEEEeeccceecCCCC
Q 007680 350 MPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDEN--MVAHVSDFGIYKLLGEGE 427 (593)
Q Consensus 350 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~--~~~kL~Dfg~a~~~~~~~ 427 (593)
|+||+|.+++......+++.++..++.||+.||+|||+++ |+||||||+|||++.+ +.+||+|||+|+.+....
T Consensus 236 ~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~----iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~ 311 (573)
T 3uto_A 236 MSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN----YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ 311 (573)
T ss_dssp CCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTT----EECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTS
T ss_pred cCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCC----eeeccCChhhccccCCCCCCEEEeeccceeEccCCC
Confidence 9999999999776666999999999999999999999655 9999999999999854 899999999999876443
Q ss_pred CccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhhhhhhh
Q 007680 428 DSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLVR 507 (593)
Q Consensus 428 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 507 (593)
.....+||+.|||||++.+..|+.++||||+||++|||++|+.||.+.... .....+...... .
T Consensus 312 ---~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~--~~~~~i~~~~~~-----------~ 375 (573)
T 3uto_A 312 ---SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDD--ETLRNVKSCDWN-----------M 375 (573)
T ss_dssp ---EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH--HHHHHHHTTCCC-----------C
T ss_pred ---ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH--HHHHHHHhCCCC-----------C
Confidence 233457999999999999999999999999999999999999999763221 111111111000 0
Q ss_pred hhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 508 EEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 508 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
.......+++++.+|+.+||..||++|||+.|+++|
T Consensus 376 ---~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 376 ---DDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp ---CSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ---CcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 001112345678999999999999999999999986
No 19
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=1.5e-46 Score=408.62 Aligned_cols=249 Identities=19% Similarity=0.281 Sum_probs=202.6
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhh---HHHHHHH---HHHHHHHhhcCCCCcceeeeeeecCCce
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQL---ERAFRSF---DSECEVLRNVRHRNLIKILSSYSNPDFK 343 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~---~~E~~~l~~l~h~niv~l~~~~~~~~~~ 343 (593)
.++|++.+.||+|+||.||+|+.+ +|+.||||++++.. ....... ..++.+++.++|||||+++++|.+.+..
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 478999999999999999999976 79999999997643 1112223 3446777788999999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceec
Q 007680 344 ALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLL 423 (593)
Q Consensus 344 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~ 423 (593)
|+|||||+||+|.+++.+.+. +++..+..++.||+.||+|||++ ||+||||||+|||++.+|.+||+|||+|+.+
T Consensus 268 ylVmEy~~GGdL~~~l~~~~~-l~E~~a~~y~~qIl~aL~yLH~~----gIiHRDLKPeNILld~~G~vKL~DFGlA~~~ 342 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQHGV-FSEADMRFYAAEIILGLEHMHNR----FVVYRDLKPANILLDEHGHVRISDLGLACDF 342 (689)
T ss_dssp EEEECCCCSCBHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHTT----TEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEecCCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHC----CccccCCchHHeEEeCCCCEEecccceeeec
Confidence 999999999999999987654 99999999999999999999954 5999999999999999999999999999987
Q ss_pred CCCCCccccccccCCccccCccccCC-CCCCccchHHHHHHHHHHHHhCCCCCCccccccc-hHHHHHHHhcCCchhhhh
Q 007680 424 GEGEDSVRQTMTMATIGYMAPEYGLE-GIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEM-SLRRWVKESLPHGLTEVV 501 (593)
Q Consensus 424 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~ 501 (593)
.... ....+||+.|||||++.+ ..|+.++||||+||++|||++|++||.+...... .........
T Consensus 343 ~~~~----~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~--------- 409 (689)
T 3v5w_A 343 SKKK----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM--------- 409 (689)
T ss_dssp SSCC----CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHC---------
T ss_pred CCCC----CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCC---------
Confidence 5433 234679999999999865 5799999999999999999999999976432211 111111100
Q ss_pred hhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCC-----HHHHHHH
Q 007680 502 DANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRIN-----MTDAAAK 546 (593)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~ 546 (593)
. ...+..+++++.+|+.+||..||++|++ ++|+++|
T Consensus 410 -------~--~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~H 450 (689)
T 3v5w_A 410 -------A--VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES 450 (689)
T ss_dssp -------C--CCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTS
T ss_pred -------C--CCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcC
Confidence 0 0111234568899999999999999998 6888876
No 20
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=1e-45 Score=377.78 Aligned_cols=283 Identities=33% Similarity=0.540 Sum_probs=229.4
Q ss_pred CCHHHHHHhhhccccccccCccCcccEEEEEeCCCCeEEEEEeehhhHHHHHHHHHHHHHHhhcCCCCcceeeeeeecCC
Q 007680 262 TSYLDIQRATDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPD 341 (593)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 341 (593)
.++.++...+++|++.+.||+|+||.||+|++++++.||+|++........+.+.+|++++++++||||+++++++.+.+
T Consensus 29 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 108 (321)
T 2qkw_B 29 VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERN 108 (321)
T ss_dssp -CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTT
T ss_pred ecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC
Confidence 34455566788999999999999999999998889999999987765556678999999999999999999999999999
Q ss_pred ceEEEEeccCCCCHHHHHhhCCC---CCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeec
Q 007680 342 FKALVLEFMPNGSLEKWLYSHNY---FLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFG 418 (593)
Q Consensus 342 ~~~lv~e~~~~gsL~~~l~~~~~---~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg 418 (593)
..++||||+++|+|.+++..... .+++.++..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||
T Consensus 109 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~----ivH~dlkp~Nil~~~~~~~kl~Dfg 184 (321)
T 2qkw_B 109 EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA----IIHRDVKSINILLDENFVPKITDFG 184 (321)
T ss_dssp CCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTT----EECSCCCSTTEEECTTCCEEECCCT
T ss_pred eEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCC----eecCCCCHHHEEECCCCCEEEeecc
Confidence 99999999999999999876542 5899999999999999999999654 9999999999999999999999999
Q ss_pred cceecCCCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCcccccc-chHHHHHHHhcC-Cc
Q 007680 419 IYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGE-MSLRRWVKESLP-HG 496 (593)
Q Consensus 419 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~-~~~~~~~~~~~~-~~ 496 (593)
+++...............||+.|+|||++.+..++.++||||||+++|||++|+.||......+ .....|...... ..
T Consensus 185 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 264 (321)
T 2qkw_B 185 ISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQ 264 (321)
T ss_dssp TCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTC
T ss_pred cccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhcccccc
Confidence 9987654333323344568999999999988899999999999999999999999997643322 233333322211 11
Q ss_pred hhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhh
Q 007680 497 LTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVK 553 (593)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 553 (593)
....+++.... ....+++..+.+++.+||+.||++|||+.|++++|+.+...
T Consensus 265 ~~~~~~~~~~~-----~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~ 316 (321)
T 2qkw_B 265 LEQIVDPNLAD-----KIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316 (321)
T ss_dssp CCSSSSSSCTT-----CSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred HHHhcChhhcc-----ccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhc
Confidence 22222222211 12235677899999999999999999999999999988653
No 21
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=8.9e-45 Score=368.92 Aligned_cols=263 Identities=24% Similarity=0.383 Sum_probs=217.7
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhhHHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEEEec
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVLEF 349 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 349 (593)
.++|.+.+.||+|+||.||+|.+. +++.||+|++........+.+.+|++++++++||||+++++++.+++..++||||
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 88 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY 88 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence 468999999999999999999975 6899999998766666778899999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCCCCCc
Q 007680 350 MPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDS 429 (593)
Q Consensus 350 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~ 429 (593)
+++++|.+++......+++.++..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++........
T Consensus 89 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~----ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 164 (310)
T 3s95_A 89 IKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMN----IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQ 164 (310)
T ss_dssp CTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTT----EECSCCSTTSEEECTTSCEEECCCTTCEECC-----
T ss_pred cCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC----ccCCCCCcCeEEECCCCCEEEeecccceeccccccc
Confidence 9999999999986667999999999999999999999654 999999999999999999999999999876543321
Q ss_pred c------------ccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCch
Q 007680 430 V------------RQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGL 497 (593)
Q Consensus 430 ~------------~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 497 (593)
. ......||+.|+|||++.+..++.++||||||+++|||++|..||........... ...
T Consensus 165 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~--------~~~ 236 (310)
T 3s95_A 165 PEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFG--------LNV 236 (310)
T ss_dssp ---------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSS--------BCH
T ss_pred ccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHh--------hhh
Confidence 1 11145699999999999999999999999999999999999999866322211000 000
Q ss_pred hhhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhhh
Q 007680 498 TEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVKF 554 (593)
Q Consensus 498 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 554 (593)
....+ ...+..+++.+.+++.+||+.||++|||+.|+++.|++++...
T Consensus 237 ~~~~~---------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~ 284 (310)
T 3s95_A 237 RGFLD---------RYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHL 284 (310)
T ss_dssp HHHHH---------HTCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred hcccc---------ccCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhc
Confidence 00000 0112234567899999999999999999999999999998765
No 22
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=4.6e-45 Score=368.77 Aligned_cols=251 Identities=23% Similarity=0.327 Sum_probs=210.6
Q ss_pred hhccccccccCccCcccEEEEEe-CCCCeEEEEEeehhhHHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEEEec
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTI-SDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVLEF 349 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 349 (593)
.++|++.+.||+|+||.||+|.. .+++.||+|++........+.+.+|+.++++++||||+++++++..++..++||||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 46899999999999999999996 47999999999876655567789999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCCCCCc
Q 007680 350 MPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDS 429 (593)
Q Consensus 350 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~ 429 (593)
+++|+|.+++.... +++.++..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++........
T Consensus 99 ~~~~~L~~~~~~~~--~~~~~~~~~~~qi~~~l~~lH~~~----i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 171 (297)
T 3fxz_A 99 LAGGSLTDVVTETC--MDEGQIAAVCRECLQALEFLHSNQ----VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS- 171 (297)
T ss_dssp CTTCBHHHHHHHSC--CCHHHHHHHHHHHHHHHHHHHHTT----EECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC-
T ss_pred CCCCCHHHHHhhcC--CCHHHHHHHHHHHHHHHHHHHhCC----ceeCCCCHHHEEECCCCCEEEeeCCCceecCCccc-
Confidence 99999999998764 899999999999999999999654 99999999999999999999999999987654432
Q ss_pred cccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhhhhhhhhh
Q 007680 430 VRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLVREE 509 (593)
Q Consensus 430 ~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 509 (593)
......||+.|+|||++.+..++.++|||||||++|||++|+.||........ .........+
T Consensus 172 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~~~~~~~~~~--------------- 234 (297)
T 3fxz_A 172 -KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA-LYLIATNGTP--------------- 234 (297)
T ss_dssp -CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH-HHHHHHHCSC---------------
T ss_pred -ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHhCCCC---------------
Confidence 23445799999999999999999999999999999999999999976322111 1111111100
Q ss_pred hhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 510 QAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 510 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
....+..++..+.+++.+||+.||++|||+.|+++|
T Consensus 235 -~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 235 -ELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp -CCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred -CCCCccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 011122345678999999999999999999999875
No 23
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=5.9e-45 Score=372.39 Aligned_cols=278 Identities=21% Similarity=0.289 Sum_probs=212.9
Q ss_pred hhhccccccccCccCcccEEEEEeCCCCeEEEEEeehhhHHHHHHHHHHHHHHhhcCCCCcceeeeeeecCC----ceEE
Q 007680 270 ATDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPD----FKAL 345 (593)
Q Consensus 270 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~~l 345 (593)
..++|++.+.||+|+||.||+|++. ++.||||+++.... .......|+.++++++||||+++++++.... ..++
T Consensus 22 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~l 99 (322)
T 3soc_A 22 QSMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDK-QSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWL 99 (322)
T ss_dssp TTEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred chhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCch-HHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEE
Confidence 3578999999999999999999985 79999999976543 3345567999999999999999999998754 3699
Q ss_pred EEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcC------CCCCeEecCCCCCCeeeCCCCcEEEEeecc
Q 007680 346 VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGH------SSVHIIHCDLKPTNILLDENMVAHVSDFGI 419 (593)
Q Consensus 346 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~------~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 419 (593)
||||+++|+|.+++.... +++..+..++.|++.||+|||+.. .+.+|+||||||+||+++.++.+||+|||+
T Consensus 100 v~e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~ 177 (322)
T 3soc_A 100 ITAFHEKGSLSDFLKANV--VSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGL 177 (322)
T ss_dssp EEECCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred EEecCCCCCHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCc
Confidence 999999999999998755 899999999999999999999540 011699999999999999999999999999
Q ss_pred ceecCCCCCccccccccCCccccCccccCC-----CCCCccchHHHHHHHHHHHHhCCCCCCccccccch-HHHHHHHhc
Q 007680 420 YKLLGEGEDSVRQTMTMATIGYMAPEYGLE-----GIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMS-LRRWVKESL 493 (593)
Q Consensus 420 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~-~~~~~~~~~ 493 (593)
++...............||+.|+|||++.+ ..++.++|||||||++|||+||+.||......... +.... ...
T Consensus 178 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~-~~~ 256 (322)
T 3soc_A 178 ALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEI-GQH 256 (322)
T ss_dssp CEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHH-CSS
T ss_pred ccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhh-ccC
Confidence 988765544333444679999999999876 35677899999999999999999999764322111 11100 000
Q ss_pred CCchhhhhh----hhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhh
Q 007680 494 PHGLTEVVD----ANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVK 553 (593)
Q Consensus 494 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 553 (593)
+ ...+..+ ...............++.++.+++.+||+.||++|||+.|+++.|+++...
T Consensus 257 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~ 319 (322)
T 3soc_A 257 P-SLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL 319 (322)
T ss_dssp C-CHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred C-chhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 0 0111110 000000111112224566799999999999999999999999999998764
No 24
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=7.5e-45 Score=372.14 Aligned_cols=286 Identities=35% Similarity=0.504 Sum_probs=233.2
Q ss_pred hcccCCHHHHHHhhhccccccccCccCcccEEEEEeCCCCeEEEEEeehhhH-HHHHHHHHHHHHHhhcCCCCcceeeee
Q 007680 258 IWRRTSYLDIQRATDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLE-RAFRSFDSECEVLRNVRHRNLIKILSS 336 (593)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~ 336 (593)
..+.+++.++....++|++.+.||+|+||.||+|+..+|+.||+|++..... .....+.+|++++++++||||++++++
T Consensus 16 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~ 95 (326)
T 3uim_A 16 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF 95 (326)
T ss_dssp CCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEE
T ss_pred ccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEE
Confidence 3467889999999999999999999999999999988899999999976532 223368899999999999999999999
Q ss_pred eecCCceEEEEeccCCCCHHHHHhhCCC---CCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEE
Q 007680 337 YSNPDFKALVLEFMPNGSLEKWLYSHNY---FLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAH 413 (593)
Q Consensus 337 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~---~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~k 413 (593)
+...+..++||||+++|+|.+++..... .+++..+..++.|++.||+|||++. ..+|+||||||+||+++.++.+|
T Consensus 96 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~-~~~ivH~Dlkp~Nil~~~~~~~k 174 (326)
T 3uim_A 96 CMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHC-DPKIIHRDVKAANILLDEEFEAV 174 (326)
T ss_dssp ECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSS-SSCEECCCCSGGGEEECTTCCEE
T ss_pred EecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCC-CCCeEeCCCchhhEEECCCCCEE
Confidence 9999999999999999999999987543 4899999999999999999999762 23699999999999999999999
Q ss_pred EEeeccceecCCCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCcc---ccccchHHHHHH
Q 007680 414 VSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEM---FIGEMSLRRWVK 490 (593)
Q Consensus 414 L~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~---~~~~~~~~~~~~ 490 (593)
|+|||++......... ......||+.|+|||++.+..++.++||||||+++|||++|+.||... .........|+.
T Consensus 175 l~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 253 (326)
T 3uim_A 175 VGDFGLAKLMDYKDTH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK 253 (326)
T ss_dssp ECCCSSCEECCSSSSC-EECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHT
T ss_pred eccCccccccCccccc-ccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHH
Confidence 9999999877543322 233456999999999998888999999999999999999999999743 122334445554
Q ss_pred HhcCCc-hhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHh
Q 007680 491 ESLPHG-LTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKI 550 (593)
Q Consensus 491 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 550 (593)
...... .....+..... ....+.+..+.+++.+||+.||++|||+.|++++|++.
T Consensus 254 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~ 309 (326)
T 3uim_A 254 GLLKEKKLEALVDVDLQG-----NYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309 (326)
T ss_dssp TTTSSCCSTTSSCTTCTT-----SCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred HHhhchhhhhhcChhhcc-----ccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence 443332 23333322211 12235577899999999999999999999999999874
No 25
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=1.9e-44 Score=375.69 Aligned_cols=261 Identities=23% Similarity=0.413 Sum_probs=216.1
Q ss_pred hhccccccccCccCcccEEEEEeC--------CCCeEEEEEeehhh-HHHHHHHHHHHHHHhhc-CCCCcceeeeeeecC
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS--------DGTDVAIKVFNLQL-ERAFRSFDSECEVLRNV-RHRNLIKILSSYSNP 340 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 340 (593)
.++|++.+.||+|+||.||+|++. ++..||+|+++... ....+.+.+|+++++++ +||||+++++++.+.
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 578999999999999999999852 35579999997653 34567899999999999 899999999999999
Q ss_pred CceEEEEeccCCCCHHHHHhhCC---------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCee
Q 007680 341 DFKALVLEFMPNGSLEKWLYSHN---------------YFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNIL 405 (593)
Q Consensus 341 ~~~~lv~e~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIl 405 (593)
+..++||||+++|+|.+++.... ..+++.++..++.||+.||+|||+++ |+||||||+||+
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~----ivHrDlkp~NIl 235 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK----CIHRDLAARNVL 235 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTT----EECSCCCGGGEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC----eeccccchhhEE
Confidence 99999999999999999998754 24789999999999999999999654 999999999999
Q ss_pred eCCCCcEEEEeeccceecCCCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccch
Q 007680 406 LDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMS 484 (593)
Q Consensus 406 l~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~ellt-g~~pf~~~~~~~~~ 484 (593)
++.++.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... .
T Consensus 236 l~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~--~ 313 (370)
T 2psq_A 236 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE--E 313 (370)
T ss_dssp ECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--G
T ss_pred ECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHH--H
Confidence 99999999999999987765443333344567889999999999999999999999999999999 99999764221 1
Q ss_pred HHHHHHHhcCCchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhhh
Q 007680 485 LRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVKF 554 (593)
Q Consensus 485 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 554 (593)
....+..... ...+..++.++.+++.+||+.||++|||+.|++++|+++....
T Consensus 314 ~~~~~~~~~~-----------------~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~ 366 (370)
T 2psq_A 314 LFKLLKEGHR-----------------MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLT 366 (370)
T ss_dssp HHHHHHTTCC-----------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCC-----------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHh
Confidence 1121111110 1112234668899999999999999999999999999987654
No 26
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=2.3e-44 Score=365.65 Aligned_cols=262 Identities=26% Similarity=0.381 Sum_probs=206.3
Q ss_pred HHhhhccccccccCccCcccEEEEEeCCCCeEEEEEeehhh--HHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEE
Q 007680 268 QRATDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKAL 345 (593)
Q Consensus 268 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 345 (593)
....++|++.+.||+|+||.||+|+. +|+.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 33 ~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 111 (309)
T 3p86_A 33 DIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSI 111 (309)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEE
T ss_pred cCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEE
Confidence 34467899999999999999999987 58899999987543 3445678999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCC--CCCHHHHHHHHHHHHHHHHHHHhcCCCCC--eEecCCCCCCeeeCCCCcEEEEeeccce
Q 007680 346 VLEFMPNGSLEKWLYSHNY--FLDILERLNIMIDVGSALEYLHNGHSSVH--IIHCDLKPTNILLDENMVAHVSDFGIYK 421 (593)
Q Consensus 346 v~e~~~~gsL~~~l~~~~~--~l~~~~~~~i~~~i~~~L~~LH~~~~~~~--ivH~Dlkp~NIll~~~~~~kL~Dfg~a~ 421 (593)
||||+++|+|.+++..... .+++..+..++.|++.||+|||+ .+ |+||||||+||+++.++.+||+|||+++
T Consensus 112 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~----~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~ 187 (309)
T 3p86_A 112 VTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN----RNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSR 187 (309)
T ss_dssp EEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHT----SSSCCCCTTCCGGGEEECTTCCEEECCCC---
T ss_pred EEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHc----CCCCEECCCCChhhEEEeCCCcEEECCCCCCc
Confidence 9999999999999987543 48999999999999999999994 55 9999999999999999999999999997
Q ss_pred ecCCCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhh
Q 007680 422 LLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVV 501 (593)
Q Consensus 422 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 501 (593)
...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||......+ ....+....
T Consensus 188 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~--~~~~~~~~~-------- 255 (309)
T 3p86_A 188 LKASTF--LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQ--VVAAVGFKC-------- 255 (309)
T ss_dssp ----------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHH--HHHHHHHSC--------
T ss_pred cccccc--cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHhcC--------
Confidence 654322 12234568999999999999999999999999999999999999997642211 111111000
Q ss_pred hhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhhh
Q 007680 502 DANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVKF 554 (593)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 554 (593)
.....+..+++++.+++.+||+.||++|||+.|+++.|+.+....
T Consensus 256 --------~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~ 300 (309)
T 3p86_A 256 --------KRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSA 300 (309)
T ss_dssp --------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC--
T ss_pred --------CCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhC
Confidence 001111234567899999999999999999999999999887654
No 27
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=1e-44 Score=365.78 Aligned_cols=276 Identities=24% Similarity=0.369 Sum_probs=213.2
Q ss_pred hhccccccccCccCcccEEEEEe-----CCCCeEEEEEeehhhHHHHHHHHHHHHHHhhcCCCCcceeeeeeecC--Cce
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTI-----SDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNP--DFK 343 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 343 (593)
.++|++.+.||+|+||.||+|++ .+++.||+|++........+.+.+|++++++++||||+++++++... ...
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 88 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence 46899999999999999999984 26889999999877666677899999999999999999999988653 568
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceec
Q 007680 344 ALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLL 423 (593)
Q Consensus 344 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~ 423 (593)
++||||+++++|.+++......+++.++..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++...
T Consensus 89 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~----ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~ 164 (295)
T 3ugc_A 89 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR----YIHRDLATRNILVENENRVKIGDFGLTKVL 164 (295)
T ss_dssp EEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTT----CCCSCCSGGGEEEEETTEEEECCCCSCC--
T ss_pred EEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCC----cccCCCCHhhEEEcCCCeEEEccCcccccc
Confidence 9999999999999999887767999999999999999999999654 999999999999999999999999999876
Q ss_pred CCCCCcc-ccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchh-hhh
Q 007680 424 GEGEDSV-RQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLT-EVV 501 (593)
Q Consensus 424 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~-~~~ 501 (593)
....... ......++..|+|||++.+..++.++||||||+++|||+||..|+...... .............. ...
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 241 (295)
T 3ugc_A 165 PQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE---FMRMIGNDKQGQMIVFHL 241 (295)
T ss_dssp -----------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHH---HHHHHCTTCCTHHHHHHH
T ss_pred cCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHH---HHhhhcCccccchhHHHH
Confidence 5443221 123345777899999999999999999999999999999999998763211 11111110000000 000
Q ss_pred hhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhhh
Q 007680 502 DANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVKF 554 (593)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 554 (593)
... .......+.+..+++++.+++.+||+.||++|||+.|+++.|+++....
T Consensus 242 ~~~-~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l 293 (295)
T 3ugc_A 242 IEL-LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293 (295)
T ss_dssp HHH-HHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred HHH-HhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhc
Confidence 000 0111112223456778999999999999999999999999999987654
No 28
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=8.1e-44 Score=363.70 Aligned_cols=262 Identities=21% Similarity=0.294 Sum_probs=215.5
Q ss_pred ccCCHHHHHHhhhc----------cccccccCccCcccEEEEEeC-CCCeEEEEEeehhhHHHHHHHHHHHHHHhhcCCC
Q 007680 260 RRTSYLDIQRATDE----------FNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHR 328 (593)
Q Consensus 260 ~~~~~~~~~~~~~~----------~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 328 (593)
..+++.++..+++. |+..+.||+|+||.||+|+.. +|+.||||++........+.+.+|+.++++++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 34667777776653 777889999999999999976 7999999999876555567789999999999999
Q ss_pred CcceeeeeeecCCceEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCC
Q 007680 329 NLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDE 408 (593)
Q Consensus 329 niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~ 408 (593)
||+++++++...+..++||||+++++|.+++... .+++..+..++.|++.||+|||+++ |+||||||+||+++.
T Consensus 103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~l~~~~~~~i~~qi~~~L~~LH~~~----ivH~Dlkp~NIll~~ 176 (321)
T 2c30_A 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV--RLNEEQIATVCEAVLQALAYLHAQG----VIHRDIKSDSILLTL 176 (321)
T ss_dssp TBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHHHTT----EECCCCSGGGEEECT
T ss_pred CcceEEEEEEECCEEEEEEecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCC----eecCCCCHHHEEECC
Confidence 9999999999999999999999999999998754 3899999999999999999999654 999999999999999
Q ss_pred CCcEEEEeeccceecCCCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHH
Q 007680 409 NMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRW 488 (593)
Q Consensus 409 ~~~~kL~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~ 488 (593)
++.+||+|||++........ ......||+.|+|||++.+..++.++||||||+++|||++|+.||..... ......
T Consensus 177 ~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~--~~~~~~ 252 (321)
T 2c30_A 177 DGRVKLSDFGFCAQISKDVP--KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP--VQAMKR 252 (321)
T ss_dssp TCCEEECCCTTCEECCSSSC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHHH
T ss_pred CCcEEEeeeeeeeecccCcc--ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHH
Confidence 99999999999987654322 22345799999999999999999999999999999999999999976321 111122
Q ss_pred HHHhcCCchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 489 VKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
+....+.. ......+++.+.+++.+||+.||++|||+.|+++|
T Consensus 253 ~~~~~~~~---------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 253 LRDSPPPK---------------LKNSHKVSPVLRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp HHHSSCCC---------------CTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HhcCCCCC---------------cCccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 22111111 01112235678999999999999999999999986
No 29
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=2.9e-44 Score=367.79 Aligned_cols=249 Identities=21% Similarity=0.323 Sum_probs=208.2
Q ss_pred hhhccccccccCccCcccEEEEEe-CCCCeEEEEEeehhh--HHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEE
Q 007680 270 ATDEFNECNLLGTSSFGSVYKGTI-SDGTDVAIKVFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALV 346 (593)
Q Consensus 270 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 346 (593)
..++|++.+.||+|+||.||+|++ .+|+.||||++.... ....+.+.+|+++++.++||||+++++++...+..++|
T Consensus 13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 92 (328)
T 3fe3_A 13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLI 92 (328)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEE
Confidence 356899999999999999999997 489999999997652 34556788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCCC
Q 007680 347 LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEG 426 (593)
Q Consensus 347 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~ 426 (593)
|||+++|+|.+++...+. +++.++..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++......
T Consensus 93 ~e~~~~~~L~~~l~~~~~-l~~~~~~~~~~qi~~al~~lH~~~----ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 167 (328)
T 3fe3_A 93 MEYASGGEVFDYLVAHGR-MKEKEARSKFRQIVSAVQYCHQKR----IVHRDLKAENLLLDADMNIKIADFGFSNEFTVG 167 (328)
T ss_dssp ECCCTTCBHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHHTT----CCCSCCCGGGEEECTTSCEEECSTTCCGGGSSS
T ss_pred EECCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCC----EeccCCCHHHEEEcCCCCEEEeeccCceecCCC
Confidence 999999999999977654 999999999999999999999655 999999999999999999999999999876543
Q ss_pred CCccccccccCCccccCccccCCCCCC-ccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhhhhh
Q 007680 427 EDSVRQTMTMATIGYMAPEYGLEGIVS-AKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANL 505 (593)
Q Consensus 427 ~~~~~~~~~~gt~~y~aPE~~~~~~~s-~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 505 (593)
. ......||+.|+|||++.+..++ .++||||+||++|||++|+.||...... .....+....
T Consensus 168 ~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--~~~~~i~~~~------------ 230 (328)
T 3fe3_A 168 G---KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK--ELRERVLRGK------------ 230 (328)
T ss_dssp C---GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHCC------------
T ss_pred C---ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHH--HHHHHHHhCC------------
Confidence 3 23445799999999999887764 8999999999999999999999763211 1111111100
Q ss_pred hhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 506 VREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 506 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
...+..+++++.+++.+||..||++|||++|+++|
T Consensus 231 ------~~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 231 ------YRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp ------CCCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred ------CCCCCCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 00111235678999999999999999999999987
No 30
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=3.5e-44 Score=367.12 Aligned_cols=262 Identities=27% Similarity=0.434 Sum_probs=213.7
Q ss_pred hhccccccccCccCcccEEEEEeC----CCCeEEEEEeehh-hHHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEE
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS----DGTDVAIKVFNLQ-LERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKAL 345 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 345 (593)
.++|++.+.||+|+||.||+|.+. .+..||||+++.. .....+.+.+|+.++++++||||+++++++.+++..++
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 127 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI 127 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence 468999999999999999999974 3445999999865 34455789999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCC
Q 007680 346 VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGE 425 (593)
Q Consensus 346 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~ 425 (593)
||||+++++|.+++......+++.++..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++....
T Consensus 128 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~----ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 203 (325)
T 3kul_A 128 VTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLG----YVHRDLAARNVLVDSNLVCKVSDFGLSRVLED 203 (325)
T ss_dssp EEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTT----EECSCCSGGGEEECTTCCEEECCCSSCEECC-
T ss_pred EeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC----eeCCCCCcceEEECCCCCEEECCCCccccccc
Confidence 99999999999999877667999999999999999999999654 99999999999999999999999999998755
Q ss_pred CCCcc-ccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccchHHHHHHHhcCCchhhhhhh
Q 007680 426 GEDSV-RQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDA 503 (593)
Q Consensus 426 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 503 (593)
..... ......+|+.|+|||++.+..++.++||||||+++|||++ |+.||...... .....+....
T Consensus 204 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--~~~~~~~~~~---------- 271 (325)
T 3kul_A 204 DPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR--DVISSVEEGY---------- 271 (325)
T ss_dssp ---CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH--HHHHHHHTTC----------
T ss_pred CccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH--HHHHHHHcCC----------
Confidence 43221 2233346778999999988899999999999999999999 99999763221 1111111110
Q ss_pred hhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhhhc
Q 007680 504 NLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVKFL 555 (593)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~ 555 (593)
..+.+..++..+.+++.+||+.||++|||+.|+++.|+.+.....
T Consensus 272 -------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~ 316 (325)
T 3kul_A 272 -------RLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPE 316 (325)
T ss_dssp -------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC
T ss_pred -------CCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCcc
Confidence 111122456688999999999999999999999999999876653
No 31
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=9.7e-45 Score=378.95 Aligned_cols=261 Identities=24% Similarity=0.394 Sum_probs=215.0
Q ss_pred hhhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhh-HHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEEE
Q 007680 270 ATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVL 347 (593)
Q Consensus 270 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 347 (593)
..++|++.+.||+|+||.||+|++. +++.||||+++... ....+.+.+|++++++++||||+++++++...+..++||
T Consensus 112 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 191 (377)
T 3cbl_A 112 NHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVM 191 (377)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred chHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEE
Confidence 3578999999999999999999986 78999999987643 334457889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCCCC
Q 007680 348 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGE 427 (593)
Q Consensus 348 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~ 427 (593)
||+++|+|.+++...+..+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++......
T Consensus 192 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~----ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~ 267 (377)
T 3cbl_A 192 ELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC----CIHRDLAARNCLVTEKNVLKISDFGMSREEADGV 267 (377)
T ss_dssp ECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTT----EECSCCSGGGEEECTTCCEEECCGGGCEECTTSE
T ss_pred EcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC----cCCcccCHHHEEEcCCCcEEECcCCCceecCCCc
Confidence 999999999999876666999999999999999999999655 9999999999999999999999999998754332
Q ss_pred CccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccchHHHHHHHhcCCchhhhhhhhhh
Q 007680 428 DSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLV 506 (593)
Q Consensus 428 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (593)
.........++..|+|||++.++.++.++|||||||++|||+| |..||...... .....+....
T Consensus 268 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~--~~~~~~~~~~------------- 332 (377)
T 3cbl_A 268 YAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ--QTREFVEKGG------------- 332 (377)
T ss_dssp EECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH--HHHHHHHTTC-------------
T ss_pred eeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCC-------------
Confidence 1111122235678999999988899999999999999999998 99999764221 1111111110
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhh
Q 007680 507 REEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVK 553 (593)
Q Consensus 507 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 553 (593)
..+.+..++.++.+++.+||+.||++|||+.++++.|++++..
T Consensus 333 ----~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~ 375 (377)
T 3cbl_A 333 ----RLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR 375 (377)
T ss_dssp ----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ----CCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence 1111223566889999999999999999999999999998764
No 32
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=4.1e-43 Score=355.96 Aligned_cols=281 Identities=30% Similarity=0.469 Sum_probs=226.7
Q ss_pred cccCCHHHHHHhhhccccc------cccCccCcccEEEEEeCCCCeEEEEEeehhh----HHHHHHHHHHHHHHhhcCCC
Q 007680 259 WRRTSYLDIQRATDEFNEC------NLLGTSSFGSVYKGTISDGTDVAIKVFNLQL----ERAFRSFDSECEVLRNVRHR 328 (593)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~------~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~ 328 (593)
...+++.++..++++|... +.||+|+||.||+|.. +++.||+|++.... ....+.+.+|+.++++++||
T Consensus 12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 90 (307)
T 2nru_A 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE 90 (307)
T ss_dssp CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCT
T ss_pred CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCC
Confidence 4568899999999998877 8999999999999987 58899999986532 33457789999999999999
Q ss_pred CcceeeeeeecCCceEEEEeccCCCCHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeee
Q 007680 329 NLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHN--YFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILL 406 (593)
Q Consensus 329 niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll 406 (593)
||+++++++.+.+..++||||+++++|.+++.... ..+++..+..++.|++.||+|||+++ |+||||||+||++
T Consensus 91 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~----i~H~dlkp~Nili 166 (307)
T 2nru_A 91 NLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENH----HIHRDIKSANILL 166 (307)
T ss_dssp TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTT----EECSCCCGGGEEE
T ss_pred CeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCC----eecCCCCHHHEEE
Confidence 99999999999999999999999999999987532 35899999999999999999999654 9999999999999
Q ss_pred CCCCcEEEEeeccceecCCCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHH
Q 007680 407 DENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLR 486 (593)
Q Consensus 407 ~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~ 486 (593)
+.++.+||+|||++................||+.|+|||++.+ .++.++||||||+++|+|++|..||........ ..
T Consensus 167 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-~~ 244 (307)
T 2nru_A 167 DEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQL-LL 244 (307)
T ss_dssp CTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSB-TT
T ss_pred cCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHH-HH
Confidence 9999999999999987765443333344578999999998765 589999999999999999999999977433221 11
Q ss_pred HHHHH--hcCCchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhh
Q 007680 487 RWVKE--SLPHGLTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKV 552 (593)
Q Consensus 487 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 552 (593)
.+... .....+.+.++..+.. ....++..+.+++.+||+.||++|||+.+++++|+++..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 245 DIKEEIEDEEKTIEDYIDKKMND------ADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp HHHHHHHTTSCCHHHHSCSSCSC------CCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred HHHHHhhhhhhhhhhhccccccc------cchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 11111 1111233333332211 123456789999999999999999999999999999854
No 33
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=7.5e-44 Score=354.42 Aligned_cols=258 Identities=25% Similarity=0.347 Sum_probs=214.4
Q ss_pred hhccccccccCccCcccEEEEEeCCCCeEEEEEeehhhHHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEEEecc
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVLEFM 350 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 350 (593)
.++|++.+.||+|+||.||+|.+.+++.||+|++..... ..+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM 87 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeC
Confidence 468999999999999999999998889999999986532 2357899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCCCCCcc
Q 007680 351 PNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSV 430 (593)
Q Consensus 351 ~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~ 430 (593)
++++|.+++......+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++........ .
T Consensus 88 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~----i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~ 162 (269)
T 4hcu_A 88 EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC----VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY-T 162 (269)
T ss_dssp TTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT----CCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHH-H
T ss_pred CCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCC----eecCCcchheEEEcCCCCEEecccccccccccccc-c
Confidence 999999999887777999999999999999999999655 99999999999999999999999999986543221 1
Q ss_pred ccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccchHHHHHHHhcCCchhhhhhhhhhhhh
Q 007680 431 RQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLVREE 509 (593)
Q Consensus 431 ~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 509 (593)
......+++.|+|||++.+..++.++||||+|+++|+|++ |+.||...... .....+......
T Consensus 163 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~--~~~~~~~~~~~~-------------- 226 (269)
T 4hcu_A 163 SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS--EVVEDISTGFRL-------------- 226 (269)
T ss_dssp STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHHHTTCCC--------------
T ss_pred cccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH--HHHHHHhcCccC--------------
Confidence 2233456788999999988899999999999999999999 99999763221 111111111100
Q ss_pred hhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhh
Q 007680 510 QAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVK 553 (593)
Q Consensus 510 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 553 (593)
..+..+++.+.+++.+||+.||++|||+.|++++|+++.+.
T Consensus 227 ---~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 227 ---YKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp ---CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred ---CCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 01112345789999999999999999999999999998754
No 34
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.4e-43 Score=357.44 Aligned_cols=272 Identities=21% Similarity=0.365 Sum_probs=212.7
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehh---hHHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEE
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQ---LERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALV 346 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 346 (593)
.++|++.+.||+|+||.||+|++. +++.||+|++... .....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 467999999999999999999965 7899999998543 234557889999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCCC
Q 007680 347 LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEG 426 (593)
Q Consensus 347 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~ 426 (593)
|||+++++|.+++...+. +++.++..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++......
T Consensus 90 ~e~~~g~~L~~~l~~~~~-~~~~~~~~~~~qi~~~l~~lH~~~----i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 164 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESHGP-LSVDTAINFTNQILDGIKHAHDMR----IVHRDIKPQNILIDSNKTLKIFDFGIAKALSET 164 (294)
T ss_dssp EECCCSCBHHHHHHHHCS-CCHHHHHHHHHHHHHHHHHHHHTT----CCCCCCCGGGEEECTTSCEEECCCSSSTTC---
T ss_pred EeCCCCCCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCC----cccCCCCHHHEEECCCCCEEEEeCCCccccccc
Confidence 999999999999987654 999999999999999999999655 999999999999999999999999999876433
Q ss_pred CCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhhhhhh
Q 007680 427 EDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLV 506 (593)
Q Consensus 427 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (593)
.. .......||+.|+|||++.+..++.++||||||+++|||++|+.||......... .+......+. .
T Consensus 165 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~-~~~~~~~~~~-~--------- 232 (294)
T 4eqm_A 165 SL-TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIA-IKHIQDSVPN-V--------- 232 (294)
T ss_dssp -----------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHH-HHHHSSCCCC-H---------
T ss_pred cc-cccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHH-HHHhhccCCC-c---------
Confidence 22 1223456899999999999999999999999999999999999999763221110 0111100000 0
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhcccCCCCCCC-CHHHHHHHHHHhhhhhcchhhccCC
Q 007680 507 REEQAFSAKMDCILSIMDFALDCCMESPDMRI-NMTDAAAKLKKIKVKFLDDAAATNW 563 (593)
Q Consensus 507 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~evl~~L~~i~~~~~~~~~~~~~ 563 (593)
......++++.+.+++.+||+.||++|| +++++.+.|+.+............+
T Consensus 233 ----~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~~~~~~~~~~ 286 (294)
T 4eqm_A 233 ----TTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHENRANEDVYEL 286 (294)
T ss_dssp ----HHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSSSTTCCCCC-
T ss_pred ----chhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhccCCcchhhh
Confidence 0111123467889999999999999999 8999999999876554433333333
No 35
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=3.4e-43 Score=357.45 Aligned_cols=268 Identities=23% Similarity=0.296 Sum_probs=207.6
Q ss_pred hhccccccccCccCcccEEEEEeCCCCeEEEEEeehhh--HHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEEEe
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVLE 348 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 348 (593)
.++|++.+.||+|+||.||+|++.+|+.||+|+++... ......+.+|++++++++||||+++++++.+++..++|||
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 99 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE 99 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence 57899999999999999999999889999999997543 2234678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCCCCC
Q 007680 349 FMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGED 428 (593)
Q Consensus 349 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~ 428 (593)
|++ ++|.+++......+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++.......
T Consensus 100 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~----ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~ 174 (311)
T 3niz_A 100 FME-KDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHR----ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVR 174 (311)
T ss_dssp CCS-EEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTT----EECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC
T ss_pred CCC-CCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC----cccCCCchHhEEECCCCCEEEccCcCceecCCCcc
Confidence 997 4899988877767999999999999999999999654 99999999999999999999999999987654322
Q ss_pred ccccccccCCccccCccccCC-CCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHh---cCCchhhhhhhh
Q 007680 429 SVRQTMTMATIGYMAPEYGLE-GIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKES---LPHGLTEVVDAN 504 (593)
Q Consensus 429 ~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 504 (593)
......+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||......+ ......... .+.......+..
T Consensus 175 --~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~ 251 (311)
T 3niz_A 175 --SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD-QLPKIFSILGTPNPREWPQVQELP 251 (311)
T ss_dssp -----CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTT-HHHHHHHHHCCCCTTTSGGGTTSH
T ss_pred --cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHHCCCChHHhhhhhccc
Confidence 2234568999999998876 568999999999999999999999997743322 122221111 111111111000
Q ss_pred hh--------hhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 505 LV--------REEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 505 ~~--------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
.. ...........+++++.+++.+||+.||++|||++|+++|
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 301 (311)
T 3niz_A 252 LWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301 (311)
T ss_dssp HHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 00 0000011112345678999999999999999999999975
No 36
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.8e-44 Score=368.38 Aligned_cols=251 Identities=24% Similarity=0.337 Sum_probs=199.4
Q ss_pred hhhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhh-HHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEEE
Q 007680 270 ATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVL 347 (593)
Q Consensus 270 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 347 (593)
..++|++.+.||+|+||.||+|++. +|+.||||++.... ......+.+|++++++++||||+++++++...+..++||
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 87 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVL 87 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEE
Confidence 3678999999999999999999964 79999999997643 233457889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCCCC
Q 007680 348 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGE 427 (593)
Q Consensus 348 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~ 427 (593)
||+++|+|.+++...+. +++.++..++.|++.||+|||+++ |+||||||+||++++++.+||+|||++.......
T Consensus 88 E~~~gg~L~~~l~~~~~-l~~~~~~~i~~qi~~aL~~LH~~g----ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~ 162 (347)
T 3zgw_A 88 EYCPGGELFDYIISQDR-LSEEETRVVFRQIVSAVAYVHSQG----YAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNK 162 (347)
T ss_dssp ECCTTCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHTT----CBCCCCCGGGEEECTTSCEEECCCTTCBC-----
T ss_pred eCCCCCCHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCC----eEeCCccHHHEEEcCCCCEEEEeccCcccccCCC
Confidence 99999999999977654 999999999999999999999655 9999999999999999999999999988654332
Q ss_pred CccccccccCCccccCccccCCCCC-CccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhhhhhh
Q 007680 428 DSVRQTMTMATIGYMAPEYGLEGIV-SAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLV 506 (593)
Q Consensus 428 ~~~~~~~~~gt~~y~aPE~~~~~~~-s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (593)
. .......||+.|+|||++.+..+ +.++||||+||++|+|++|..||..... ......+....
T Consensus 163 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~--~~~~~~i~~~~------------- 226 (347)
T 3zgw_A 163 D-YHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNV--MALYKKIMRGK------------- 226 (347)
T ss_dssp ----------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHTC-------------
T ss_pred C-ccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCH--HHHHHHHHcCC-------------
Confidence 2 12234569999999999988775 8999999999999999999999976321 11111111110
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 507 REEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 507 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
...+..+++++.+++.+||+.||++|||++|+++|
T Consensus 227 -----~~~p~~~s~~~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 227 -----YDVPKWLSPSSILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp -----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred -----CCCCCCCCHHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence 01111235578899999999999999999999987
No 37
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=3.7e-44 Score=371.97 Aligned_cols=269 Identities=26% Similarity=0.403 Sum_probs=218.3
Q ss_pred CHHHHHHhhhccccccccCccCcccEEEEEe------CCCCeEEEEEeehhh-HHHHHHHHHHHHHHhhc-CCCCcceee
Q 007680 263 SYLDIQRATDEFNECNLLGTSSFGSVYKGTI------SDGTDVAIKVFNLQL-ERAFRSFDSECEVLRNV-RHRNLIKIL 334 (593)
Q Consensus 263 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~ 334 (593)
...++....++|++.+.||+|+||.||+|++ .+++.||||+++... ....+.+.+|++++.++ +||||++++
T Consensus 13 ~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~ 92 (359)
T 3vhe_A 13 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 92 (359)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred CcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeee
Confidence 4455566788999999999999999999973 246889999997643 34456799999999999 789999999
Q ss_pred eeeecCC-ceEEEEeccCCCCHHHHHhhCCC-------------------------------------------------
Q 007680 335 SSYSNPD-FKALVLEFMPNGSLEKWLYSHNY------------------------------------------------- 364 (593)
Q Consensus 335 ~~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~------------------------------------------------- 364 (593)
+++.+.+ ..++||||+++|+|.+++.....
T Consensus 93 ~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (359)
T 3vhe_A 93 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKS 172 (359)
T ss_dssp EEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-------------------------------------------
T ss_pred eeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccc
Confidence 9988765 48999999999999999976532
Q ss_pred ----------------CCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCCCCC
Q 007680 365 ----------------FLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGED 428 (593)
Q Consensus 365 ----------------~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~ 428 (593)
.+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++.......
T Consensus 173 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~----ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 248 (359)
T 3vhe_A 173 LSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK----CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 248 (359)
T ss_dssp -----------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTT----CCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTT
T ss_pred cchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCC----cccCCCChhhEEEcCCCcEEEEeccceeeeccccc
Confidence 2899999999999999999999654 99999999999999999999999999987755544
Q ss_pred ccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccchHHHHHHHhcCCchhhhhhhhhhh
Q 007680 429 SVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLVR 507 (593)
Q Consensus 429 ~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 507 (593)
........+|+.|+|||++.+..++.++|||||||++|||+| |+.||......+. ..........
T Consensus 249 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~-~~~~~~~~~~------------- 314 (359)
T 3vhe_A 249 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-FCRRLKEGTR------------- 314 (359)
T ss_dssp CEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH-HHHHHHHTCC-------------
T ss_pred chhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHH-HHHHHHcCCC-------------
Confidence 444455668899999999999999999999999999999998 9999976432221 1111111111
Q ss_pred hhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhh
Q 007680 508 EEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVK 553 (593)
Q Consensus 508 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 553 (593)
...+..+++++.+++.+||+.||++|||+.|++++|+++...
T Consensus 315 ----~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 356 (359)
T 3vhe_A 315 ----MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 356 (359)
T ss_dssp ----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ----CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHH
Confidence 011122456789999999999999999999999999998754
No 38
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=2.7e-43 Score=361.62 Aligned_cols=249 Identities=21% Similarity=0.257 Sum_probs=207.5
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhh---HHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEE
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALV 346 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 346 (593)
.++|++.+.||+|+||.||+|+.+ +|+.||+|+++... ......+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 468999999999999999999976 79999999998753 23456788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCCC
Q 007680 347 LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEG 426 (593)
Q Consensus 347 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~ 426 (593)
|||+++|+|.+++...+. +++..+..++.||+.||+|||+++ |+||||||+||+++.++.+||+|||+++.....
T Consensus 84 ~E~~~gg~L~~~l~~~~~-~~~~~~~~~~~qi~~aL~~LH~~~----ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 158 (337)
T 1o6l_A 84 MEYANGGELFFHLSRERV-FTEERARFYGAEIVSALEYLHSRD----VVYRDIKLENLMLDKDGHIKITDFGLCKEGISD 158 (337)
T ss_dssp EECCTTCBHHHHHHHHSC-CCHHHHHHHHHHHHHHHHHHHHTT----CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCT
T ss_pred EeCCCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCC----eecCcCCHHHEEECCCCCEEEeeccchhhcccC
Confidence 999999999999987654 899999999999999999999654 999999999999999999999999999864332
Q ss_pred CCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhhhhhh
Q 007680 427 EDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLV 506 (593)
Q Consensus 427 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (593)
.. ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+... .
T Consensus 159 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--~~~~~i~~~-----------~-- 221 (337)
T 1o6l_A 159 GA--TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--RLFELILME-----------E-- 221 (337)
T ss_dssp TC--CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHC-----------C--
T ss_pred CC--cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHH--HHHHHHHcC-----------C--
Confidence 21 233457999999999999999999999999999999999999999763211 111111110 0
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhcccCCCCCCC-----CHHHHHHH
Q 007680 507 REEQAFSAKMDCILSIMDFALDCCMESPDMRI-----NMTDAAAK 546 (593)
Q Consensus 507 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 546 (593)
. ..+..+++++.+++.+||+.||++|| +++|+++|
T Consensus 222 ---~--~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 222 ---I--RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp ---C--CCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred ---C--CCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 0 01112456789999999999999999 89999886
No 39
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.7e-43 Score=358.68 Aligned_cols=252 Identities=19% Similarity=0.284 Sum_probs=209.4
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhhHHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEEEec
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVLEF 349 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 349 (593)
.++|++.+.||+|+||.||+|... +++.||+|.++... .....+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 468999999999999999999976 68899999987543 3345688999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCC--CCcEEEEeeccceecCCCC
Q 007680 350 MPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDE--NMVAHVSDFGIYKLLGEGE 427 (593)
Q Consensus 350 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~--~~~~kL~Dfg~a~~~~~~~ 427 (593)
+++++|.+++......+++.++..++.|++.||+|||+++ |+||||||+||+++. ++.+||+|||++.......
T Consensus 83 ~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~g----ivH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~ 158 (321)
T 1tki_A 83 ISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHN----IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD 158 (321)
T ss_dssp CCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTT----EECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC----CCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC
Confidence 9999999999877666999999999999999999999654 999999999999987 7899999999998875433
Q ss_pred CccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhhhhhhh
Q 007680 428 DSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLVR 507 (593)
Q Consensus 428 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 507 (593)
......||+.|+|||++.+..++.++|||||||++|+|++|..||...... .....+...... .
T Consensus 159 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~i~~~~~~-----------~ 222 (321)
T 1tki_A 159 ---NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ--QIIENIMNAEYT-----------F 222 (321)
T ss_dssp ---EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHHHHHTCCC-----------C
T ss_pred ---ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHH--HHHHHHHcCCCC-----------C
Confidence 223456899999999999888999999999999999999999999763221 111111111100 0
Q ss_pred hhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 508 EEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 508 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
.......++.++.+++.+||..||++|||+.|+++|
T Consensus 223 ---~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 223 ---DEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp ---CHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ---ChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 011122346688999999999999999999999986
No 40
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=1.9e-43 Score=351.16 Aligned_cols=259 Identities=25% Similarity=0.344 Sum_probs=214.4
Q ss_pred hhhccccccccCccCcccEEEEEeCCCCeEEEEEeehhhHHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEEEec
Q 007680 270 ATDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVLEF 349 (593)
Q Consensus 270 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 349 (593)
..++|++.+.||+|+||.||+|+.+++..||+|+++.... ..+.+.+|++++.+++||||+++++++.+.+..++||||
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (268)
T 3sxs_A 6 KREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEY 84 (268)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred chhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEc
Confidence 3578999999999999999999998888999999976532 235688999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCCCCCc
Q 007680 350 MPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDS 429 (593)
Q Consensus 350 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~ 429 (593)
+++++|.+++......+++.++..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||.+........
T Consensus 85 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~----i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~- 159 (268)
T 3sxs_A 85 ISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQ----FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQY- 159 (268)
T ss_dssp CTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTT----EEESSCSGGGEEECTTCCEEECCTTCEEECCTTCE-
T ss_pred cCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCC----eecCCcCcceEEECCCCCEEEccCccceecchhhh-
Confidence 9999999999887666999999999999999999999654 99999999999999999999999999987654432
Q ss_pred cccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccchHHHHHHHhcCCchhhhhhhhhhhh
Q 007680 430 VRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLVRE 508 (593)
Q Consensus 430 ~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 508 (593)
.......+|+.|+|||++.+..++.++||||||+++|||++ |+.||....... ..........
T Consensus 160 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--~~~~~~~~~~-------------- 223 (268)
T 3sxs_A 160 VSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSE--VVLKVSQGHR-------------- 223 (268)
T ss_dssp EECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHH--HHHHHHTTCC--------------
T ss_pred hcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHH--HHHHHHcCCC--------------
Confidence 12233456778999999988889999999999999999999 999997642211 1111111100
Q ss_pred hhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhh
Q 007680 509 EQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVK 553 (593)
Q Consensus 509 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 553 (593)
...+..+++.+.+++.+||+.||++|||+.|++++|+.++.+
T Consensus 224 ---~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 224 ---LYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp ---CCCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred ---CCCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 001112345789999999999999999999999999998654
No 41
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=2.7e-43 Score=364.93 Aligned_cols=252 Identities=22% Similarity=0.273 Sum_probs=207.9
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhhHH------HHHHHHHHHHHHhhcCCCCcceeeeeeecCCce
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLER------AFRSFDSECEVLRNVRHRNLIKILSSYSNPDFK 343 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 343 (593)
.++|++.+.||+|+||.||+|+.+ +|+.||+|+++..... ..+.+.+|+.++++++||||+++++++.+.+..
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 567999999999999999999976 6899999999764321 246789999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCC----cEEEEeecc
Q 007680 344 ALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENM----VAHVSDFGI 419 (593)
Q Consensus 344 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~----~~kL~Dfg~ 419 (593)
++||||+++|+|.+++.... .+++.++..++.||+.||+|||+++ |+||||||+||++++++ .+||+|||+
T Consensus 91 ~lv~e~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~g----ivHrDlkp~NIll~~~~~~~~~vkl~DFG~ 165 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNYLHTKK----IAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165 (361)
T ss_dssp EEEEECCCSCBHHHHHTTCS-CCBHHHHHHHHHHHHHHHHHHHHTT----EECCCCSGGGEEESCTTSSSCCEEECCCSS
T ss_pred EEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC----cccCCCCHHHEEEeCCCCCccCEEEEecCC
Confidence 99999999999999997655 4999999999999999999999654 99999999999998877 799999999
Q ss_pred ceecCCCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhh
Q 007680 420 YKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTE 499 (593)
Q Consensus 420 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 499 (593)
+........ .....||+.|+|||++.+..++.++|||||||++|+|++|..||.+.... .....+....
T Consensus 166 a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~--~~~~~i~~~~------ 234 (361)
T 2yab_A 166 AHEIEDGVE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ--ETLANITAVS------ 234 (361)
T ss_dssp CEECCTTCC---CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH--HHHHHHHTTC------
T ss_pred ceEcCCCCc---cccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhcC------
Confidence 987754322 23456999999999999999999999999999999999999999763211 1111111100
Q ss_pred hhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 500 VVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
... .......++..+.+++.+||..||++|||+.|+++|
T Consensus 235 -----~~~---~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 273 (361)
T 2yab_A 235 -----YDF---DEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (361)
T ss_dssp -----CCC---CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred -----CCC---CchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 000 001122345678999999999999999999999975
No 42
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=9.5e-44 Score=363.48 Aligned_cols=254 Identities=20% Similarity=0.302 Sum_probs=207.7
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhh-HHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEEEe
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVLE 348 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 348 (593)
.++|++.+.||+|+||.||+|.+. +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+++..++|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 468999999999999999999976 78999999997543 2334568899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCCCCC
Q 007680 349 FMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGED 428 (593)
Q Consensus 349 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~ 428 (593)
|+++++|.+++..... +++.++..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++..+.....
T Consensus 86 ~~~~~~L~~~l~~~~~-~~~~~~~~i~~qi~~aL~~LH~~g----ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 160 (323)
T 3tki_A 86 YCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 160 (323)
T ss_dssp CCTTEEGGGGSBTTTB-CCHHHHHHHHHHHHHHHHHHHHTT----EECSCCSGGGEEECTTCCEEECCCTTCEECEETTE
T ss_pred cCCCCcHHHHHhhcCC-CCHHHHHHHHHHHHHHHHHHHHCC----ccccccchHHEEEeCCCCEEEEEeeccceeccCCc
Confidence 9999999999976654 999999999999999999999654 99999999999999999999999999987654333
Q ss_pred ccccccccCCccccCccccCCCCC-CccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhhhhhhh
Q 007680 429 SVRQTMTMATIGYMAPEYGLEGIV-SAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLVR 507 (593)
Q Consensus 429 ~~~~~~~~gt~~y~aPE~~~~~~~-s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 507 (593)
........||+.|+|||++.+..+ +.++|||||||++|+|++|+.||............+.....
T Consensus 161 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~-------------- 226 (323)
T 3tki_A 161 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT-------------- 226 (323)
T ss_dssp ECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCT--------------
T ss_pred ccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccc--------------
Confidence 323345679999999999887765 78999999999999999999999775433332222221110
Q ss_pred hhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 508 EEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 508 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
.......++..+.+++.+||+.||++|||+.|++++
T Consensus 227 ---~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 227 ---YLNPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp ---TSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ---cCCccccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 011112345678999999999999999999999876
No 43
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=6.1e-44 Score=378.19 Aligned_cols=263 Identities=21% Similarity=0.271 Sum_probs=212.2
Q ss_pred CHHHHHHhhhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhhH---HHHHHHHHHHHHHhhcCCCCcceeeeeee
Q 007680 263 SYLDIQRATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLE---RAFRSFDSECEVLRNVRHRNLIKILSSYS 338 (593)
Q Consensus 263 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 338 (593)
.+.++....++|++.++||+|+||.||+|+.+ +++.||+|+++.... .....+.+|..++..++||||+++++++.
T Consensus 65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 144 (437)
T 4aw2_A 65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ 144 (437)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence 34555667789999999999999999999976 588999999986432 22334889999999999999999999999
Q ss_pred cCCceEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeec
Q 007680 339 NPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFG 418 (593)
Q Consensus 339 ~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg 418 (593)
+.+..++||||+++|+|.+++......+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||
T Consensus 145 ~~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~g----iiHrDLKp~NILl~~~g~vkL~DFG 220 (437)
T 4aw2_A 145 DDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLH----YVHRDIKPDNILMDMNGHIRLADFG 220 (437)
T ss_dssp CSSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT----EECCCCSGGGEEECTTSCEEECCCT
T ss_pred eCCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCC----eEecccCHHHeeEcCCCCEEEcchh
Confidence 999999999999999999999886556999999999999999999999654 9999999999999999999999999
Q ss_pred cceecCCCCCccccccccCCccccCccccC-----CCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhc
Q 007680 419 IYKLLGEGEDSVRQTMTMATIGYMAPEYGL-----EGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESL 493 (593)
Q Consensus 419 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~ 493 (593)
+++....... .......||+.|+|||++. ...++.++|||||||++|||++|+.||......+ .+.....
T Consensus 221 la~~~~~~~~-~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~-~~~~i~~--- 295 (437)
T 4aw2_A 221 SCLKLMEDGT-VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVE-TYGKIMN--- 295 (437)
T ss_dssp TCEECCTTSC-EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHT---
T ss_pred hhhhcccCCC-cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhH-HHHhhhh---
Confidence 9987654432 2234457999999999986 5679999999999999999999999997632111 1111110
Q ss_pred CCchhhhhhhhhhhhhhhhh-hhHHHHHHHHHHHhhcccCCCCC--CCCHHHHHHH
Q 007680 494 PHGLTEVVDANLVREEQAFS-AKMDCILSIMDFALDCCMESPDM--RINMTDAAAK 546 (593)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~ 546 (593)
... ....+ ....+++++.+|+.+||..+|++ ||+++|+++|
T Consensus 296 ---------~~~---~~~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 296 ---------HKE---RFQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp ---------HHH---HCCCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred ---------ccc---cccCCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 000 00000 00124567899999999998888 9999999987
No 44
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=1.7e-43 Score=368.68 Aligned_cols=261 Identities=26% Similarity=0.446 Sum_probs=203.4
Q ss_pred hhccccccccCccCcccEEEEEeC----CCCeEEEEEeehh-hHHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEE
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS----DGTDVAIKVFNLQ-LERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKAL 345 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 345 (593)
.++|++.+.||+|+||.||+|++. ++..||||+++.. .....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 123 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence 468999999999999999999864 5778999999765 34455789999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCC
Q 007680 346 VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGE 425 (593)
Q Consensus 346 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~ 425 (593)
||||+++|+|.+++......+++.++..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++....
T Consensus 124 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~----ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 199 (373)
T 2qol_A 124 VTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG----YVHRDLAARNILINSNLVCKVSDFGLGRVLED 199 (373)
T ss_dssp EEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTT----CCCSCCCGGGEEECTTCCEEECCC--------
T ss_pred EEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC----eeCCCCCcceEEEcCCCCEEECcCcccccccc
Confidence 99999999999999887667999999999999999999999654 99999999999999999999999999987654
Q ss_pred CCCcc-ccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccchHHHHHHHhcCCchhhhhhh
Q 007680 426 GEDSV-RQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDA 503 (593)
Q Consensus 426 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 503 (593)
..... ......++..|+|||++.+..++.++|||||||++|||++ |+.||...... .....+...
T Consensus 200 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~--~~~~~i~~~----------- 266 (373)
T 2qol_A 200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ--DVIKAVDEG----------- 266 (373)
T ss_dssp --------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHH--HHHHHHHTT-----------
T ss_pred CCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcC-----------
Confidence 32211 1122235778999999998999999999999999999998 99999764221 111111110
Q ss_pred hhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhhh
Q 007680 504 NLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVKF 554 (593)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 554 (593)
...+....++.++.+++.+||+.||++||++.|+++.|+++....
T Consensus 267 ------~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~ 311 (373)
T 2qol_A 267 ------YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311 (373)
T ss_dssp ------EECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCG
T ss_pred ------CCCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCc
Confidence 011112245668899999999999999999999999999987543
No 45
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=4.8e-43 Score=355.69 Aligned_cols=264 Identities=25% Similarity=0.420 Sum_probs=208.0
Q ss_pred hhhccccccccCccCcccEEEEEeCCCCeEEEEEeehh--hHHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEEE
Q 007680 270 ATDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQ--LERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVL 347 (593)
Q Consensus 270 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 347 (593)
..++|++.+.||+|+||.||+|++. ..+|+|+++.. .....+.+.+|++++++++||||+++++++. .+..++||
T Consensus 34 ~~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~ 110 (307)
T 3lb7_A 34 EASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVT 110 (307)
T ss_dssp CTTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred cccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEE
Confidence 3568999999999999999999864 46899988753 2345578999999999999999999999875 45689999
Q ss_pred eccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCCCC
Q 007680 348 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGE 427 (593)
Q Consensus 348 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~ 427 (593)
||+++++|.+++......+++.++..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++.......
T Consensus 111 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~----ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~ 186 (307)
T 3lb7_A 111 QWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKN----IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWS 186 (307)
T ss_dssp ECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTT----CCCSCCCSSSEEECTTSCEEECCCCSSCC-----
T ss_pred ecCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC----EeeCCCChhhEEEcCCCCEEEccCCCceeccccc
Confidence 999999999999877777999999999999999999999655 9999999999999999999999999998654433
Q ss_pred CccccccccCCccccCccccC---CCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcC-Cchhhhhhh
Q 007680 428 DSVRQTMTMATIGYMAPEYGL---EGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLP-HGLTEVVDA 503 (593)
Q Consensus 428 ~~~~~~~~~gt~~y~aPE~~~---~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 503 (593)
.........||+.|+|||++. +..++.++|||||||++|||++|+.||......+. ....+..... ....
T Consensus 187 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~-~~~~~~~~~~~~~~~----- 260 (307)
T 3lb7_A 187 GSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQ-IIFMVGRGYASPDLS----- 260 (307)
T ss_dssp -------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH-HHHHHHHTCCCCCST-----
T ss_pred ccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHH-HHHHHhcCCCCcchh-----
Confidence 333334457999999999875 56789999999999999999999999976432221 1111111111 0000
Q ss_pred hhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhhhc
Q 007680 504 NLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVKFL 555 (593)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~ 555 (593)
.....+++.+.+++.+||+.||++||++.|++++|+.+...+.
T Consensus 261 ---------~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~p 303 (307)
T 3lb7_A 261 ---------KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLP 303 (307)
T ss_dssp ---------TSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTCC
T ss_pred ---------hhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhcc
Confidence 0112345688999999999999999999999999999887653
No 46
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.5e-43 Score=369.03 Aligned_cols=264 Identities=25% Similarity=0.398 Sum_probs=217.6
Q ss_pred hhccccccccCccCcccEEEEEeC--------CCCeEEEEEeehhh-HHHHHHHHHHHHHHhhc-CCCCcceeeeeeecC
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS--------DGTDVAIKVFNLQL-ERAFRSFDSECEVLRNV-RHRNLIKILSSYSNP 340 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 340 (593)
.++|.+.+.||+|+||.||+|++. ++..||+|+++... ....+.+.+|+++++++ +||||+++++++...
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 578999999999999999999852 23579999997653 34557889999999999 999999999999999
Q ss_pred CceEEEEeccCCCCHHHHHhhCC---------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCee
Q 007680 341 DFKALVLEFMPNGSLEKWLYSHN---------------YFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNIL 405 (593)
Q Consensus 341 ~~~~lv~e~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIl 405 (593)
+..++||||+++|+|.+++.... ..+++.++..++.|++.||+|||+++ |+||||||+||+
T Consensus 148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~----ivH~Dlkp~NIl 223 (382)
T 3tt0_A 148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK----CIHRDLAARNVL 223 (382)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT----CCCSCCCGGGEE
T ss_pred CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC----EecCCCCcceEE
Confidence 99999999999999999998754 24899999999999999999999654 999999999999
Q ss_pred eCCCCcEEEEeeccceecCCCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccch
Q 007680 406 LDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMS 484 (593)
Q Consensus 406 l~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~ellt-g~~pf~~~~~~~~~ 484 (593)
++.++.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |..||...... .
T Consensus 224 l~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~--~ 301 (382)
T 3tt0_A 224 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE--E 301 (382)
T ss_dssp ECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--H
T ss_pred EcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--H
Confidence 99999999999999987755433333344567889999999999999999999999999999999 99999763211 1
Q ss_pred HHHHHHHhcCCchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhhhcch
Q 007680 485 LRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVKFLDD 557 (593)
Q Consensus 485 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 557 (593)
....+..... ...+..++.++.+++.+||+.||++|||+.|++++|+++.......
T Consensus 302 ~~~~~~~~~~-----------------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~ 357 (382)
T 3tt0_A 302 LFKLLKEGHR-----------------MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQ 357 (382)
T ss_dssp HHHHHHTTCC-----------------CCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCSC
T ss_pred HHHHHHcCCC-----------------CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhcC
Confidence 1122211110 1111234568899999999999999999999999999998765333
No 47
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=7.9e-43 Score=362.87 Aligned_cols=282 Identities=13% Similarity=0.124 Sum_probs=215.7
Q ss_pred hhhccccccccCccCcccEEEEEeCC------CCeEEEEEeehhhHHH-----------HHHHHHHHHHHhhcCCCCcce
Q 007680 270 ATDEFNECNLLGTSSFGSVYKGTISD------GTDVAIKVFNLQLERA-----------FRSFDSECEVLRNVRHRNLIK 332 (593)
Q Consensus 270 ~~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~-----------~~~~~~E~~~l~~l~h~niv~ 332 (593)
..++|++.+.||+|+||.||+|.+.+ ++.||||++....... ...+..|+..+..++||||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 35689999999999999999998754 4789999987643211 122445666778889999999
Q ss_pred eeeeeecC----CceEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeC-
Q 007680 333 ILSSYSNP----DFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLD- 407 (593)
Q Consensus 333 l~~~~~~~----~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~- 407 (593)
+++++... ...++||||+ +++|.+++......+++.++..++.|++.||+|||++ +|+||||||+||+++
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~----~iiHrDlkp~Nill~~ 187 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEH----EYVHGDIKASNLLLNY 187 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCCGGGEEEES
T ss_pred EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC----CeEEecCCHHHEEEec
Confidence 99998764 4589999999 9999999988766799999999999999999999965 499999999999999
Q ss_pred -CCCcEEEEeeccceecCCCCCcc-----ccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccc
Q 007680 408 -ENMVAHVSDFGIYKLLGEGEDSV-----RQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIG 481 (593)
Q Consensus 408 -~~~~~kL~Dfg~a~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~ 481 (593)
.++.+||+|||+++.+....... ......||+.|+|||++.+..++.++|||||||++|||+||+.||......
T Consensus 188 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~ 267 (364)
T 3op5_A 188 KNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKD 267 (364)
T ss_dssp SCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC
T ss_pred CCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccC
Confidence 88999999999998765432211 112345999999999999999999999999999999999999999864322
Q ss_pred cchHHHHHHHhcCCchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhhhc-chhhc
Q 007680 482 EMSLRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVKFL-DDAAA 560 (593)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~-~~~~~ 560 (593)
. ...............+.++..+. ...++.++.+++.+||+.||++||++.++++.|+++..... .....
T Consensus 268 ~-~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~~~~~~~ 338 (364)
T 3op5_A 268 P-KYVRDSKIRYRENIASLMDKCFP--------AANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGSKDDGK 338 (364)
T ss_dssp H-HHHHHHHHHHHHCHHHHHHHHSC--------TTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCCCCCC
T ss_pred H-HHHHHHHHHhhhhHHHHHHHhcc--------cccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCcCCc
Confidence 2 22222222211222222222211 12346789999999999999999999999999999887652 33345
Q ss_pred cCCcc
Q 007680 561 TNWRN 565 (593)
Q Consensus 561 ~~~~~ 565 (593)
.+|..
T Consensus 339 ~dw~~ 343 (364)
T 3op5_A 339 LDLSV 343 (364)
T ss_dssp CCC--
T ss_pred cceEe
Confidence 66654
No 48
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=2.9e-43 Score=358.07 Aligned_cols=261 Identities=27% Similarity=0.403 Sum_probs=216.2
Q ss_pred hhhccccccccCccCcccEEEEEe------CCCCeEEEEEeehhh-HHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCc
Q 007680 270 ATDEFNECNLLGTSSFGSVYKGTI------SDGTDVAIKVFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDF 342 (593)
Q Consensus 270 ~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 342 (593)
..++|.+.+.||+|+||.||+|.. .+++.||+|+++... ....+.+.+|++++++++||||+++++++.+.+.
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 100 (314)
T 2ivs_A 21 PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGP 100 (314)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred chhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCc
Confidence 357899999999999999999985 245789999997643 4455788999999999999999999999999999
Q ss_pred eEEEEeccCCCCHHHHHhhCCC-----------------------CCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCC
Q 007680 343 KALVLEFMPNGSLEKWLYSHNY-----------------------FLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDL 399 (593)
Q Consensus 343 ~~lv~e~~~~gsL~~~l~~~~~-----------------------~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dl 399 (593)
.++||||+++++|.+++..... .+++.++..++.|+++||+|||+++ |+||||
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~----ivH~di 176 (314)
T 2ivs_A 101 LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK----LVHRDL 176 (314)
T ss_dssp CEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTT----EECCCC
T ss_pred eEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCC----Cccccc
Confidence 9999999999999999987532 3889999999999999999999655 999999
Q ss_pred CCCCeeeCCCCcEEEEeeccceecCCCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHh-CCCCCCcc
Q 007680 400 KPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEM 478 (593)
Q Consensus 400 kp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~ellt-g~~pf~~~ 478 (593)
||+||+++.++.+||+|||++................+++.|+|||++.+..++.++||||||+++|||++ |..||...
T Consensus 177 kp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 256 (314)
T 2ivs_A 177 AARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI 256 (314)
T ss_dssp SGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred chheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 99999999999999999999987765443333344567889999999988889999999999999999999 99999764
Q ss_pred ccccchHHHHHHHhcCCchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhh
Q 007680 479 FIGEMSLRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVK 553 (593)
Q Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 553 (593)
... .....+..... ...+..+++++.+++.+||+.||++|||+.|++++|+++..+
T Consensus 257 ~~~--~~~~~~~~~~~-----------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 257 PPE--RLFNLLKTGHR-----------------MERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK 312 (314)
T ss_dssp CGG--GHHHHHHTTCC-----------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred CHH--HHHHHhhcCCc-----------------CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence 322 12222211110 011123456889999999999999999999999999998654
No 49
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=1.1e-42 Score=351.09 Aligned_cols=274 Identities=15% Similarity=0.151 Sum_probs=219.7
Q ss_pred hhccccccccCccCcccEEEEEe-CCCCeEEEEEeehhhHHHHHHHHHHHHHHhhc-CCCCcceeeeeeecCCceEEEEe
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTI-SDGTDVAIKVFNLQLERAFRSFDSECEVLRNV-RHRNLIKILSSYSNPDFKALVLE 348 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 348 (593)
.++|++.+.||+|+||.||+|+. .+++.||+|++.... ..+.+.+|+.+++++ +|+|++++++++.+....++|||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e 86 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID 86 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence 46799999999999999999996 479999999987543 234678899999999 79999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCc-----EEEEeeccceec
Q 007680 349 FMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMV-----AHVSDFGIYKLL 423 (593)
Q Consensus 349 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~-----~kL~Dfg~a~~~ 423 (593)
|+ +++|.+++...+..+++.++..++.|++.||+|||++ +|+||||||+||+++.++. +||+|||++...
T Consensus 87 ~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~----~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~ 161 (298)
T 1csn_A 87 LL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEK----SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFY 161 (298)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTT----TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEES
T ss_pred ec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhC----CEecCCCCHHHEEeccCCCCCCCeEEEEECcccccc
Confidence 99 9999999988766799999999999999999999954 5999999999999987775 999999999887
Q ss_pred CCCCCc-----cccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccc-hHHHHHHHhcCCch
Q 007680 424 GEGEDS-----VRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEM-SLRRWVKESLPHGL 497 (593)
Q Consensus 424 ~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~-~~~~~~~~~~~~~~ 497 (593)
...... .......||+.|+|||++.+..++.++||||||+++|||++|+.||........ .....+..
T Consensus 162 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~------ 235 (298)
T 1csn_A 162 RDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGE------ 235 (298)
T ss_dssp BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHH------
T ss_pred ccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHh------
Confidence 654321 122445699999999999999999999999999999999999999977432211 11010000
Q ss_pred hhhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhhhcc-hhhccCCc
Q 007680 498 TEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVKFLD-DAAATNWR 564 (593)
Q Consensus 498 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~-~~~~~~~~ 564 (593)
... ..........+++++.+++.+||+.||++||+++++++.|+++...... ...+.+|.
T Consensus 236 -----~~~--~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~~~~~~~~dw~ 296 (298)
T 1csn_A 236 -----KKQ--STPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNTTEDENFDWN 296 (298)
T ss_dssp -----HHH--HSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCCSCSCCGGG
T ss_pred -----hcc--CccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcCCCCCCccccC
Confidence 000 0000011123567899999999999999999999999999999877643 34456665
No 50
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=6.2e-43 Score=357.97 Aligned_cols=252 Identities=22% Similarity=0.278 Sum_probs=207.4
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhhH------HHHHHHHHHHHHHhhcCCCCcceeeeeeecCCce
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLE------RAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFK 343 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 343 (593)
.++|++.+.||+|+||.||+|... +|+.||+|+++.... ...+.+.+|+.++++++||||+++++++.+.+..
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 467999999999999999999976 689999999976431 1356789999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCC----cEEEEeecc
Q 007680 344 ALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENM----VAHVSDFGI 419 (593)
Q Consensus 344 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~----~~kL~Dfg~ 419 (593)
++||||+++++|.+++.... .+++.++..++.|++.||+|||+++ |+||||||+||+++.++ .+||+|||+
T Consensus 90 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH~~~----ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~ 164 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYYLHSLQ----IAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164 (326)
T ss_dssp EEEEECCCSCBHHHHHTTSS-CCBHHHHHHHHHHHHHHHHHHHHTT----EECCCCCGGGEEESCSSSSSCCEEECCCTT
T ss_pred EEEEEcCCCCCHHHHHHhcC-CcCHHHHHHHHHHHHHHHHHHHHCC----eEcCCCCHHHEEEecCCCCCCCEEEEECCC
Confidence 99999999999999997654 4999999999999999999999654 99999999999999887 899999999
Q ss_pred ceecCCCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhh
Q 007680 420 YKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTE 499 (593)
Q Consensus 420 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 499 (593)
++....... .....||+.|+|||++.+..++.++|||||||++|+|++|+.||......+ ....+......
T Consensus 165 a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--~~~~~~~~~~~---- 235 (326)
T 2y0a_A 165 AHKIDFGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE--TLANVSAVNYE---- 235 (326)
T ss_dssp CEECCTTSC---CCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH--HHHHHHHTCCC----
T ss_pred CeECCCCCc---cccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH--HHHHHHhcCCC----
Confidence 987754332 234569999999999998999999999999999999999999997632111 11111110000
Q ss_pred hhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 500 VVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
........++..+.+++.+||+.||++|||+.|+++|
T Consensus 236 ----------~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 236 ----------FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp ----------CCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred ----------cCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0001112345678999999999999999999999986
No 51
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=4.5e-43 Score=351.38 Aligned_cols=259 Identities=23% Similarity=0.337 Sum_probs=211.0
Q ss_pred hhhccccccccCccCcccEEEEEeCCCCeEEEEEeehhhHHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEEEec
Q 007680 270 ATDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVLEF 349 (593)
Q Consensus 270 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 349 (593)
..++|++.+.||+|+||.||++.+.++..||+|+++.... ..+.+.+|++++.+++||||+++++++.+.+..++||||
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 100 (283)
T 3gen_A 22 DPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEY 100 (283)
T ss_dssp CGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECC
T ss_pred CHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEec
Confidence 4678999999999999999999998888999999986532 235688999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCCCCCc
Q 007680 350 MPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDS 429 (593)
Q Consensus 350 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~ 429 (593)
+++++|.+++......+++.++..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++........
T Consensus 101 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~----i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~- 175 (283)
T 3gen_A 101 MANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ----FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY- 175 (283)
T ss_dssp CTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTT----CCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHH-
T ss_pred cCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCC----ccCCCCccceEEEcCCCCEEEcccccccccccccc-
Confidence 9999999999875556999999999999999999999655 99999999999999999999999999986643221
Q ss_pred cccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccchHHHHHHHhcCCchhhhhhhhhhhh
Q 007680 430 VRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLVRE 508 (593)
Q Consensus 430 ~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 508 (593)
.......+|+.|+|||++.+..++.++||||||+++|||+| |+.||...... .....+......
T Consensus 176 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~--~~~~~~~~~~~~------------- 240 (283)
T 3gen_A 176 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS--ETAEHIAQGLRL------------- 240 (283)
T ss_dssp HSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--HHHHHHHTTCCC-------------
T ss_pred ccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh--HHHHHHhcccCC-------------
Confidence 12233456788999999998899999999999999999998 99999764221 111111111100
Q ss_pred hhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhh
Q 007680 509 EQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVK 553 (593)
Q Consensus 509 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 553 (593)
..+..+++.+.+++.+||+.||++|||++|++++|+++..+
T Consensus 241 ----~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 241 ----YRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE 281 (283)
T ss_dssp ----CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ----CCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence 01112345789999999999999999999999999988643
No 52
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=8.6e-43 Score=352.38 Aligned_cols=266 Identities=24% Similarity=0.362 Sum_probs=204.1
Q ss_pred hhccccccccCccCcccEEEEEeCCCCeEEEEEeehhhHHHHHHHHHHHHHHhh--cCCCCcceeeeeeec----CCceE
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRN--VRHRNLIKILSSYSN----PDFKA 344 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~----~~~~~ 344 (593)
.++|++.+.||+|+||.||+|++ +++.||||++..... ..+..|.+++.. ++||||+++++++.. ....+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~---~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~ 82 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRDE---KSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW 82 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGGGH---HHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccccc---hhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence 57899999999999999999998 689999999976532 345556666666 799999999998654 34689
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcC----CCCCeEecCCCCCCeeeCCCCcEEEEeeccc
Q 007680 345 LVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGH----SSVHIIHCDLKPTNILLDENMVAHVSDFGIY 420 (593)
Q Consensus 345 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~----~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 420 (593)
+||||+++|+|.+++... .+++..+..++.|++.||+|||... .+.+|+||||||+||+++.++.+||+|||++
T Consensus 83 lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a 160 (301)
T 3q4u_A 83 LITHYHEMGSLYDYLQLT--TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA 160 (301)
T ss_dssp EEECCCTTCBHHHHHTTC--CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred EehhhccCCCHHHHHhhc--ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCe
Confidence 999999999999999654 3999999999999999999999210 0235999999999999999999999999999
Q ss_pred eecCCCCCcc--ccccccCCccccCccccCCC------CCCccchHHHHHHHHHHHHhC----------CCCCCcccccc
Q 007680 421 KLLGEGEDSV--RQTMTMATIGYMAPEYGLEG------IVSAKCDVYSYGVLLMETFTR----------KRPTDEMFIGE 482 (593)
Q Consensus 421 ~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~s~~~DvwSlGvvl~elltg----------~~pf~~~~~~~ 482 (593)
+......... ......||+.|+|||++.+. .++.++|||||||++|||+|| +.||.......
T Consensus 161 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~ 240 (301)
T 3q4u_A 161 VMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPND 240 (301)
T ss_dssp EEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred eecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCC
Confidence 8765443221 12334799999999998876 456799999999999999999 88886644333
Q ss_pred chHHHHHHHhcCCchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHh
Q 007680 483 MSLRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKI 550 (593)
Q Consensus 483 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 550 (593)
................ ...........++.++.+++.+||+.||++|||+.|+++.|+++
T Consensus 241 ~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 241 PSFEDMRKVVCVDQQR--------PNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp CCHHHHHHHHTTSCCC--------CCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred cchhhhhHHHhccCCC--------CCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 3322222111110000 00000111234567899999999999999999999999999986
No 53
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.2e-43 Score=369.14 Aligned_cols=261 Identities=24% Similarity=0.377 Sum_probs=212.2
Q ss_pred hhccccccccCccCcccEEEEEeC------CCCeEEEEEeehh-hHHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCce
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS------DGTDVAIKVFNLQ-LERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFK 343 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 343 (593)
.++|++.+.||+|+||.||+|++. +++.||||+++.. .......+.+|+.++++++||||+++++++.+.+..
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 149 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 149 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 468999999999999999999843 4678999999654 234456788999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCC------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCC---cEEE
Q 007680 344 ALVLEFMPNGSLEKWLYSHN------YFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENM---VAHV 414 (593)
Q Consensus 344 ~lv~e~~~~gsL~~~l~~~~------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~---~~kL 414 (593)
++||||+++|+|.+++...+ ..+++.+++.++.|++.||+|||+++ |+||||||+||+++.++ .+||
T Consensus 150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~----ivHrDlkp~NIll~~~~~~~~~kL 225 (367)
T 3l9p_A 150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH----FIHRDIAARNCLLTCPGPGRVAKI 225 (367)
T ss_dssp EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTT----CCCSCCCGGGEEESCSSTTCCEEE
T ss_pred EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCC----eeCCCCChhhEEEecCCCCceEEE
Confidence 99999999999999998643 25899999999999999999999655 99999999999999554 5999
Q ss_pred EeeccceecCCCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccchHHHHHHHhc
Q 007680 415 SDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRRWVKESL 493 (593)
Q Consensus 415 ~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~ 493 (593)
+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |..||..... ......+....
T Consensus 226 ~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~--~~~~~~i~~~~ 303 (367)
T 3l9p_A 226 GDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--QEVLEFVTSGG 303 (367)
T ss_dssp CCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--HHHHHHHHTTC
T ss_pred CCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHHcCC
Confidence 99999986543322223344567899999999988999999999999999999998 9999976321 11112111111
Q ss_pred CCchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhhh
Q 007680 494 PHGLTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVKF 554 (593)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 554 (593)
....+..++..+.+++.+||+.||++|||+.|++++|+.+....
T Consensus 304 -----------------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~ 347 (367)
T 3l9p_A 304 -----------------RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 347 (367)
T ss_dssp -----------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred -----------------CCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhCh
Confidence 01112234567899999999999999999999999999987654
No 54
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=1.3e-42 Score=356.20 Aligned_cols=274 Identities=17% Similarity=0.164 Sum_probs=216.6
Q ss_pred hhccccccccCccCcccEEEEEe-CCCCeEEEEEeehhhHHHHHHHHHHHHHHhhc-CCCCcceeeeeeecCCceEEEEe
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTI-SDGTDVAIKVFNLQLERAFRSFDSECEVLRNV-RHRNLIKILSSYSNPDFKALVLE 348 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 348 (593)
.++|++.+.||+|+||.||+|+. .+|+.||||++..... .+.+.+|+++++++ +||||+++++++...+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e 85 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE 85 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence 46799999999999999999996 4789999999876532 24688999999999 99999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCc-----EEEEeeccceec
Q 007680 349 FMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMV-----AHVSDFGIYKLL 423 (593)
Q Consensus 349 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~-----~kL~Dfg~a~~~ 423 (593)
|+ +++|.+++......+++..+..++.|++.||+|||+++ |+||||||+||+++.++. +||+|||+++.+
T Consensus 86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~----iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~ 160 (330)
T 2izr_A 86 LL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKN----LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEY 160 (330)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT----EECCCCCGGGEEECCGGGTCTTSEEECCCTTCEES
T ss_pred eC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCC----eeccCCCHHHeeeccCCCCCCceEEEEEcccceee
Confidence 99 99999999876666999999999999999999999654 999999999999998887 999999999976
Q ss_pred CCCCCcc-----ccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchh
Q 007680 424 GEGEDSV-----RQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLT 498 (593)
Q Consensus 424 ~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 498 (593)
....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ......
T Consensus 161 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~--~~~~~~------- 231 (330)
T 2izr_A 161 IDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTL--KERYQK------- 231 (330)
T ss_dssp BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSH--HHHHHH-------
T ss_pred ecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccH--HHHHHH-------
Confidence 5433211 12345799999999999999999999999999999999999999987432211 111000
Q ss_pred hhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhhhc-chhhccCCc
Q 007680 499 EVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVKFL-DDAAATNWR 564 (593)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~-~~~~~~~~~ 564 (593)
+...... .........++ ++.+++.+||+.||.+||+++++.+.|+++..... ......+|.
T Consensus 232 -i~~~~~~--~~~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~~~~~~~~~dw~ 294 (330)
T 2izr_A 232 -IGDTKRA--TPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGYMFDYEYDWI 294 (330)
T ss_dssp -HHHHHHH--SCHHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCCCSCCCTTT
T ss_pred -HHhhhcc--CCHHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcCCCCCCCccCC
Confidence 0000000 00000011234 89999999999999999999999999998876642 223345665
No 55
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=1.5e-43 Score=362.76 Aligned_cols=259 Identities=25% Similarity=0.422 Sum_probs=205.8
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCe----EEEEEeehhh-HHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceE
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTD----VAIKVFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKA 344 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~----vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 344 (593)
.++|++.+.||+|+||.||+|++. +++. ||+|.++... ....+.+.+|+.++++++||||+++++++..++ .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~ 92 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EE
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eE
Confidence 467999999999999999999964 4444 5888775433 344568999999999999999999999998765 78
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecC
Q 007680 345 LVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424 (593)
Q Consensus 345 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~ 424 (593)
+|+||+++|+|.+++......+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++...
T Consensus 93 ~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~----ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~ 168 (327)
T 3poz_A 93 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLG 168 (327)
T ss_dssp EEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTT----CCCSCCCGGGEEEEETTEEEECCTTHHHHHT
T ss_pred EEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCC----eeCCCCChheEEECCCCCEEEccCcceeEcc
Confidence 999999999999999987777999999999999999999999654 9999999999999999999999999998876
Q ss_pred CCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccchHHHHHHHhcCCchhhhhhh
Q 007680 425 EGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDA 503 (593)
Q Consensus 425 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 503 (593)
............+|..|+|||++.+..++.++|||||||++|||+| |+.||...... .....+.....
T Consensus 169 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~~~~~~~~--------- 237 (327)
T 3poz_A 169 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISSILEKGER--------- 237 (327)
T ss_dssp TTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHHHHHTTCC---------
T ss_pred CCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHH--HHHHHHHcCCC---------
Confidence 5544333444567889999999999999999999999999999999 99999764322 12222211110
Q ss_pred hhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhh
Q 007680 504 NLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVK 553 (593)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 553 (593)
...+..++.++.+++.+||+.||++|||+.|++++|+.+...
T Consensus 238 --------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 238 --------LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp --------CCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred --------CCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 111123456789999999999999999999999999998754
No 56
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=4.8e-43 Score=361.17 Aligned_cols=263 Identities=23% Similarity=0.366 Sum_probs=214.3
Q ss_pred HhhhccccccccCccCcccEEEEEeC------CCCeEEEEEeehhh-HHHHHHHHHHHHHHhhcCCCCcceeeeeeecCC
Q 007680 269 RATDEFNECNLLGTSSFGSVYKGTIS------DGTDVAIKVFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSYSNPD 341 (593)
Q Consensus 269 ~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 341 (593)
...++|++.+.||+|+||.||+|++. +++.||+|+++... ....+.+.+|+.++++++||||+++++++.+.+
T Consensus 44 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 123 (343)
T 1luf_A 44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGK 123 (343)
T ss_dssp CCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS
T ss_pred ecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCC
Confidence 34678999999999999999999974 34789999998653 344578999999999999999999999999999
Q ss_pred ceEEEEeccCCCCHHHHHhhCC-----------------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecC
Q 007680 342 FKALVLEFMPNGSLEKWLYSHN-----------------------YFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCD 398 (593)
Q Consensus 342 ~~~lv~e~~~~gsL~~~l~~~~-----------------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~D 398 (593)
..++||||+++|+|.+++.... ..+++.+++.++.|+++||+|||+++ |+|||
T Consensus 124 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~----ivH~D 199 (343)
T 1luf_A 124 PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK----FVHRD 199 (343)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT----CCCSC
T ss_pred ceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCC----eecCC
Confidence 9999999999999999998742 35899999999999999999999654 99999
Q ss_pred CCCCCeeeCCCCcEEEEeeccceecCCCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHh-CCCCCCc
Q 007680 399 LKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT-RKRPTDE 477 (593)
Q Consensus 399 lkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~ellt-g~~pf~~ 477 (593)
|||+||+++.++.+||+|||+++...............+|+.|+|||++.+..++.++||||||+++|||++ |..||..
T Consensus 200 lkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~ 279 (343)
T 1luf_A 200 LATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYG 279 (343)
T ss_dssp CSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred CCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCC
Confidence 999999999999999999999987654332222344567899999999988899999999999999999999 9999976
Q ss_pred cccccchHHHHHHHhcCCchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhhh
Q 007680 478 MFIGEMSLRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVKF 554 (593)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 554 (593)
.... .....+..... ...+..++.++.+++.+||+.||++|||+.+++++|+++....
T Consensus 280 ~~~~--~~~~~~~~~~~-----------------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~ 337 (343)
T 1luf_A 280 MAHE--EVIYYVRDGNI-----------------LACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERA 337 (343)
T ss_dssp SCHH--HHHHHHHTTCC-----------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC--
T ss_pred CChH--HHHHHHhCCCc-----------------CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhh
Confidence 3221 11111111100 0111234568899999999999999999999999999987665
No 57
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=9.1e-43 Score=370.49 Aligned_cols=255 Identities=20% Similarity=0.266 Sum_probs=208.2
Q ss_pred HhhhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhh--HHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEE
Q 007680 269 RATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKAL 345 (593)
Q Consensus 269 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 345 (593)
...++|++.+.||+|+||.||+|... +|+.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 8 ~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 87 (444)
T 3soa_A 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYL 87 (444)
T ss_dssp HHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEE
T ss_pred cccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEE
Confidence 35678999999999999999999865 78999999997642 3445678999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeC---CCCcEEEEeecccee
Q 007680 346 VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLD---ENMVAHVSDFGIYKL 422 (593)
Q Consensus 346 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~---~~~~~kL~Dfg~a~~ 422 (593)
||||+++|+|.+++..... +++.++..++.|++.||+|||+++ |+||||||+||+++ .++.+||+|||++..
T Consensus 88 v~E~~~gg~L~~~i~~~~~-~~e~~~~~i~~qil~aL~~lH~~g----ivHrDlKp~NIll~~~~~~~~vkL~DFG~a~~ 162 (444)
T 3soa_A 88 IFDLVTGGELFEDIVAREY-YSEADASHCIQQILEAVLHCHQMG----VVHRNLKPENLLLASKLKGAAVKLADFGLAIE 162 (444)
T ss_dssp EECCCBCCBHHHHHHHCSC-CCHHHHHHHHHHHHHHHHHHHHTT----CBCCCCSSTTEEESBSSTTCCEEECCCSSCBC
T ss_pred EEEeCCCCCHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCC----ccccCCCHHHEEEeccCCCCcEEEccCceeEE
Confidence 9999999999999987654 999999999999999999999654 99999999999998 467899999999987
Q ss_pred cCCCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhh
Q 007680 423 LGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVD 502 (593)
Q Consensus 423 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 502 (593)
...... ......||+.|+|||++.+..++.++||||+||++|+|++|..||..... ......+.......
T Consensus 163 ~~~~~~--~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~--~~~~~~i~~~~~~~------ 232 (444)
T 3soa_A 163 VEGEQQ--AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ--HRLYQQIKAGAYDF------ 232 (444)
T ss_dssp CCTTCC--BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHTCCCC------
T ss_pred ecCCCc--eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccH--HHHHHHHHhCCCCC------
Confidence 654332 22345799999999999999999999999999999999999999976321 11111111111000
Q ss_pred hhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 503 ANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
..+....+++++.+++.+||+.||++|||+.|+++|
T Consensus 233 --------~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 233 --------PSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp --------CTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred --------CccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 001112345678999999999999999999999986
No 58
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.6e-42 Score=353.77 Aligned_cols=274 Identities=23% Similarity=0.277 Sum_probs=213.2
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhh-HHHHHHHHHHHHHHhhcCCCCcceeeeeeecCC--ceEEE
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSYSNPD--FKALV 346 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lv 346 (593)
.++|++.+.||+|+||.||+|+.. +++.||||+++... ....+.+.+|++++++++||||+++++++...+ ..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEE
Confidence 467999999999999999999976 58999999998643 334567789999999999999999999988765 78999
Q ss_pred EeccCCCCHHHHHhhCCC--CCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeee----CCCCcEEEEeeccc
Q 007680 347 LEFMPNGSLEKWLYSHNY--FLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILL----DENMVAHVSDFGIY 420 (593)
Q Consensus 347 ~e~~~~gsL~~~l~~~~~--~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll----~~~~~~kL~Dfg~a 420 (593)
|||+++++|.+++..... .+++.++..++.|++.||+|||+++ |+||||||+||++ +.++.+||+|||++
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~----ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a 163 (319)
T 4euu_A 88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG----IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA 163 (319)
T ss_dssp EECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT----EECSCCSGGGEEEEECTTSCEEEEECCCTTC
T ss_pred EeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC----EecCCCCHHHEEEeccCCCCceEEEccCCCc
Confidence 999999999999986543 3899999999999999999999654 9999999999999 78888999999999
Q ss_pred eecCCCCCccccccccCCccccCccccC--------CCCCCccchHHHHHHHHHHHHhCCCCCCccccccc--hHHHHHH
Q 007680 421 KLLGEGEDSVRQTMTMATIGYMAPEYGL--------EGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEM--SLRRWVK 490 (593)
Q Consensus 421 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~--~~~~~~~ 490 (593)
+....... .....||+.|+|||++. +..++.++|||||||++|||++|+.||........ .....+.
T Consensus 164 ~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~ 240 (319)
T 4euu_A 164 RELEDDEQ---FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKII 240 (319)
T ss_dssp EECCTTCC---BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHH
T ss_pred eecCCCCc---eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHh
Confidence 87755432 23356899999999875 57799999999999999999999999975332221 1111222
Q ss_pred HhcCCc-hhhhh---hhhhhh---hhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhh
Q 007680 491 ESLPHG-LTEVV---DANLVR---EEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIK 551 (593)
Q Consensus 491 ~~~~~~-~~~~~---~~~~~~---~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 551 (593)
...+.. ..... ...+.. ...........+..+.+++.+||+.||++|||++|++++.++..
T Consensus 241 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~ 308 (319)
T 4euu_A 241 TGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308 (319)
T ss_dssp HHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred cCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence 222211 11100 000000 00011122456778999999999999999999999999998754
No 59
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=2.6e-43 Score=350.71 Aligned_cols=254 Identities=26% Similarity=0.383 Sum_probs=197.1
Q ss_pred hhccccccccCccCcccEEEEEeCCCCeEEEEEeehhhH----HHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEE
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLE----RAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALV 346 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 346 (593)
.++|++.+.||+|+||.||+|.+. ++.||+|+++.... ...+.+.+|+++++.++||||+++++++.+++..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 468999999999999999999985 88999999876432 2346788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCC--------CCcEEEEeec
Q 007680 347 LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDE--------NMVAHVSDFG 418 (593)
Q Consensus 347 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~--------~~~~kL~Dfg 418 (593)
|||+++++|.+++... .+++..+..++.|++.||+|||+++ ..+|+||||||+||+++. ++.+||+|||
T Consensus 85 ~e~~~~~~L~~~~~~~--~~~~~~~~~i~~~l~~~l~~lH~~~-~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg 161 (271)
T 3dtc_A 85 MEFARGGPLNRVLSGK--RIPPDILVNWAVQIARGMNYLHDEA-IVPIIHRDLKSSNILILQKVENGDLSNKILKITDFG 161 (271)
T ss_dssp EECCTTEEHHHHHTSS--CCCHHHHHHHHHHHHHHHHHHHHSS-SSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCC
T ss_pred EEcCCCCCHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhCC-CCceeecCCchHHEEEecccccccccCcceEEccCC
Confidence 9999999999998654 4899999999999999999999765 344999999999999986 7789999999
Q ss_pred cceecCCCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchh
Q 007680 419 IYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLT 498 (593)
Q Consensus 419 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 498 (593)
.+....... .....||+.|+|||++.+..++.++||||||+++|+|++|+.||........ .......
T Consensus 162 ~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~--~~~~~~~------ 229 (271)
T 3dtc_A 162 LAREWHRTT----KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAV--AYGVAMN------ 229 (271)
T ss_dssp C-----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHH--HHHHHTS------
T ss_pred ccccccccc----ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHhhhcC------
Confidence 998654332 2234689999999999888999999999999999999999999976322111 0000000
Q ss_pred hhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHh
Q 007680 499 EVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKI 550 (593)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 550 (593)
....+.+..+++.+.+++.+||+.||++|||+.|++++|+++
T Consensus 230 ----------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 230 ----------KLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp ----------CCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred ----------CCCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 000111123456789999999999999999999999999864
No 60
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.3e-43 Score=363.89 Aligned_cols=266 Identities=21% Similarity=0.340 Sum_probs=213.1
Q ss_pred HhhhccccccccCccCcccEEEEEe------CCCCeEEEEEeehhh-HHHHHHHHHHHHHHhhc-CCCCcceeeeeeecC
Q 007680 269 RATDEFNECNLLGTSSFGSVYKGTI------SDGTDVAIKVFNLQL-ERAFRSFDSECEVLRNV-RHRNLIKILSSYSNP 340 (593)
Q Consensus 269 ~~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 340 (593)
...++|++.+.||+|+||.||+|++ .+++.||+|+++... ....+.+.+|+.++.++ +||||+++++++...
T Consensus 42 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 121 (344)
T 1rjb_A 42 FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLS 121 (344)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred cCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeC
Confidence 3467899999999999999999986 245689999997543 34456789999999999 899999999999999
Q ss_pred CceEEEEeccCCCCHHHHHhhCCC----------------------CCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecC
Q 007680 341 DFKALVLEFMPNGSLEKWLYSHNY----------------------FLDILERLNIMIDVGSALEYLHNGHSSVHIIHCD 398 (593)
Q Consensus 341 ~~~~lv~e~~~~gsL~~~l~~~~~----------------------~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~D 398 (593)
+..++||||+++|+|.+++..... .+++..+..++.|++.||+|||+++ |+|||
T Consensus 122 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~----ivH~D 197 (344)
T 1rjb_A 122 GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS----CVHRD 197 (344)
T ss_dssp SSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT----EEETT
T ss_pred CccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCC----cccCC
Confidence 999999999999999999987543 2789999999999999999999654 99999
Q ss_pred CCCCCeeeCCCCcEEEEeeccceecCCCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHh-CCCCCCc
Q 007680 399 LKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT-RKRPTDE 477 (593)
Q Consensus 399 lkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~ellt-g~~pf~~ 477 (593)
|||+||+++.++.+||+|||++................+|+.|+|||++.+..++.++||||||+++|||+| |..||..
T Consensus 198 ikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~ 277 (344)
T 1rjb_A 198 LAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPG 277 (344)
T ss_dssp CSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTT
T ss_pred CChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCccc
Confidence 999999999999999999999987755443333344567889999999988899999999999999999998 9999976
Q ss_pred cccccchHHHHHHHhcCCchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhhhcc
Q 007680 478 MFIGEMSLRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVKFLD 556 (593)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~ 556 (593)
..... ........... ...+..+++++.+++.+||+.||++|||+.|++++|+.+.....+
T Consensus 278 ~~~~~-~~~~~~~~~~~-----------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~ 338 (344)
T 1rjb_A 278 IPVDA-NFYKLIQNGFK-----------------MDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAEE 338 (344)
T ss_dssp CCCSH-HHHHHHHTTCC-----------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-----
T ss_pred CCcHH-HHHHHHhcCCC-----------------CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHHH
Confidence 43221 12222221111 011122356789999999999999999999999999998766533
No 61
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=7.3e-43 Score=361.15 Aligned_cols=253 Identities=22% Similarity=0.305 Sum_probs=206.1
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhhHH-----HHHHHHHHHHHHhhcCCCCcceeeeeeecCCceE
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLER-----AFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKA 344 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 344 (593)
.++|++.+.||+|+||.||+|... +|+.||+|++...... ..+.+.+|+.++++++||||+++++++.+.+..+
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 468999999999999999999975 7899999999764321 3567899999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhC---CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCc---EEEEeec
Q 007680 345 LVLEFMPNGSLEKWLYSH---NYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMV---AHVSDFG 418 (593)
Q Consensus 345 lv~e~~~~gsL~~~l~~~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~---~kL~Dfg 418 (593)
+||||+++++|.+++... ...+++..+..++.|++.||+|||+++ |+||||||+||+++.++. +||+|||
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~----ivHrDlkp~NIl~~~~~~~~~vkl~Dfg 178 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN----IIHRDVKPHCVLLASKENSAPVKLGGFG 178 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT----EECSCCSGGGEEECSSSTTCCEEECCCT
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC----ceeccCChHHeEEecCCCCCcEEEecCc
Confidence 999999999999887643 235899999999999999999999654 999999999999986654 9999999
Q ss_pred cceecCCCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchh
Q 007680 419 IYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLT 498 (593)
Q Consensus 419 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 498 (593)
++........ ......||+.|+|||++.+..++.++|||||||++|+|++|+.||.... . .....+...
T Consensus 179 ~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~--~-~~~~~i~~~------ 247 (351)
T 3c0i_A 179 VAIQLGESGL--VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK--E-RLFEGIIKG------ 247 (351)
T ss_dssp TCEECCTTSC--BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH--H-HHHHHHHHT------
T ss_pred ceeEecCCCe--eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH--H-HHHHHHHcC------
Confidence 9988754332 2234579999999999999999999999999999999999999997631 1 111111110
Q ss_pred hhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 499 EVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
..... ......++.++.+++.+||+.||++|||+.|+++|
T Consensus 248 -----~~~~~---~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 287 (351)
T 3c0i_A 248 -----KYKMN---PRQWSHISESAKDLVRRMLMLDPAERITVYEALNH 287 (351)
T ss_dssp -----CCCCC---HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred -----CCCCC---ccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 00000 01112345688999999999999999999999976
No 62
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=6e-43 Score=365.64 Aligned_cols=253 Identities=23% Similarity=0.284 Sum_probs=209.9
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhhHHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEEEec
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVLEF 349 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 349 (593)
.++|++.+.||+|+||.||+|... +|+.||+|++..........+.+|++++++++||||+++++++.+.+..++||||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 468999999999999999999975 7899999999876555556889999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCC--CCcEEEEeeccceecCCCC
Q 007680 350 MPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDE--NMVAHVSDFGIYKLLGEGE 427 (593)
Q Consensus 350 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~--~~~~kL~Dfg~a~~~~~~~ 427 (593)
+++|+|.+++......+++.++..++.|++.||+|||+++ |+||||||+||+++. ++.+||+|||++.......
T Consensus 130 ~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~g----ivHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~ 205 (387)
T 1kob_A 130 LSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHS----IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE 205 (387)
T ss_dssp CCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTT----EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS
T ss_pred CCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC----eeecccchHHeEEecCCCCceEEEecccceecCCCc
Confidence 9999999999877656999999999999999999999654 999999999999974 4789999999998875433
Q ss_pred CccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhhhhhhh
Q 007680 428 DSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLVR 507 (593)
Q Consensus 428 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 507 (593)
. .....||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+...... .
T Consensus 206 ~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~--~~~~~~i~~~~~~-----------~ 269 (387)
T 1kob_A 206 I---VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD--LETLQNVKRCDWE-----------F 269 (387)
T ss_dssp C---EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH--HHHHHHHHHCCCC-----------C
T ss_pred c---eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCH--HHHHHHHHhCCCC-----------C
Confidence 2 2334689999999999999999999999999999999999999976321 1111111111000 0
Q ss_pred hhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 508 EEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 508 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
.......+++++.+++.+||+.||++|||+.|+++|
T Consensus 270 ---~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 270 ---DEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp ---CSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred ---CccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 000112345678999999999999999999999986
No 63
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=1.9e-42 Score=359.26 Aligned_cols=253 Identities=21% Similarity=0.313 Sum_probs=208.3
Q ss_pred hhhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhh--HHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEE
Q 007680 270 ATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALV 346 (593)
Q Consensus 270 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 346 (593)
..++|++.+.||+|+||.||+|..+ +|+.||+|+++... ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 106 (362)
T 2bdw_A 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 106 (362)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 4578999999999999999999975 68999999997642 34556789999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCC---cEEEEeeccceec
Q 007680 347 LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENM---VAHVSDFGIYKLL 423 (593)
Q Consensus 347 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~---~~kL~Dfg~a~~~ 423 (593)
|||+++|+|.+++.... .+++.++..++.|++.||+|||+++ |+||||||+||+++.++ .+||+|||++...
T Consensus 107 ~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH~~~----ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~ 181 (362)
T 2bdw_A 107 FDLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCHSNG----IVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 181 (362)
T ss_dssp ECCCCSCBHHHHHTTCS-CCCHHHHHHHHHHHHHHHHHHHHTT----CBCCCCSGGGEEESCSSTTCCEEECCCTTCBCC
T ss_pred EecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCC----eEeccCchHHEEEecCCCCCCEEEeecCcceEe
Confidence 99999999999997665 4899999999999999999999655 99999999999998654 5999999999876
Q ss_pred CCCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhhh
Q 007680 424 GEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDA 503 (593)
Q Consensus 424 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 503 (593)
..... .....||+.|+|||++.+..++.++|||||||++|+|++|+.||..... ......+.......
T Consensus 182 ~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~--~~~~~~i~~~~~~~------- 249 (362)
T 2bdw_A 182 NDSEA---WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ--HRLYAQIKAGAYDY------- 249 (362)
T ss_dssp TTCCS---CCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHTCCCC-------
T ss_pred cCCcc---cccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--HHHHHHHHhCCCCC-------
Confidence 54322 2345799999999999998999999999999999999999999976321 11111111111000
Q ss_pred hhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 504 NLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
.......+++++.+++.+||+.||++|||+.|+++|
T Consensus 250 -------~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 250 -------PSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp -------CTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred -------CcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 001112345678999999999999999999999987
No 64
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=9.9e-43 Score=350.72 Aligned_cols=268 Identities=20% Similarity=0.259 Sum_probs=205.4
Q ss_pred hccccccccCccCcccEEEEEeC-CCCeEEEEEeehhh--HHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEEEe
Q 007680 272 DEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVLE 348 (593)
Q Consensus 272 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 348 (593)
++|++.+.||+|+||.||+|+.. +++.||+|+++... ......+.+|+.++++++||||+++++++.+++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 57999999999999999999975 68999999997543 3344678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCCCCC
Q 007680 349 FMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGED 428 (593)
Q Consensus 349 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~ 428 (593)
|+++ ++.+.+......+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++.......
T Consensus 82 ~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~----ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 156 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN----VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVR 156 (292)
T ss_dssp CCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT----EECCCCSGGGEEECTTSCEEECCCTTCEECCSCCS
T ss_pred cCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC----eecCCCCHHHEEEcCCCCEEEeecccceecCCccc
Confidence 9965 777777665566999999999999999999999654 99999999999999999999999999987654322
Q ss_pred ccccccccCCccccCccccCCCC-CCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCC---chhhhhhh-
Q 007680 429 SVRQTMTMATIGYMAPEYGLEGI-VSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPH---GLTEVVDA- 503 (593)
Q Consensus 429 ~~~~~~~~gt~~y~aPE~~~~~~-~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~---~~~~~~~~- 503 (593)
......+|+.|+|||++.+.. ++.++|||||||++|||++|..||.................... ........
T Consensus 157 --~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 234 (292)
T 3o0g_A 157 --CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLP 234 (292)
T ss_dssp --CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGST
T ss_pred --cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccc
Confidence 233456899999999987765 89999999999999999998888644322222222222211110 01000000
Q ss_pred hhh------hhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 504 NLV------REEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 504 ~~~------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
... ...........++.++.+++.+||+.||++|||++|+++|
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 283 (292)
T 3o0g_A 235 DYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp TCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred cccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 000 0000001112345678999999999999999999999875
No 65
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=5.2e-43 Score=356.02 Aligned_cols=263 Identities=22% Similarity=0.344 Sum_probs=216.9
Q ss_pred hhhccccccccCccCcccEEEEEe------CCCCeEEEEEeehhh-HHHHHHHHHHHHHHhhc-CCCCcceeeeeeecCC
Q 007680 270 ATDEFNECNLLGTSSFGSVYKGTI------SDGTDVAIKVFNLQL-ERAFRSFDSECEVLRNV-RHRNLIKILSSYSNPD 341 (593)
Q Consensus 270 ~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 341 (593)
..++|++.+.||+|+||.||+|++ .+++.||+|+++... ....+.+.+|+.+++++ +||||+++++++..++
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 100 (313)
T 1t46_A 21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG 100 (313)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred ChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC
Confidence 457899999999999999999985 257889999997653 34457889999999999 9999999999999999
Q ss_pred ceEEEEeccCCCCHHHHHhhCCC-----------------CCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCe
Q 007680 342 FKALVLEFMPNGSLEKWLYSHNY-----------------FLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNI 404 (593)
Q Consensus 342 ~~~lv~e~~~~gsL~~~l~~~~~-----------------~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NI 404 (593)
..++||||+++|+|.+++..... .+++.++..++.|++.||+|||+++ |+||||||+||
T Consensus 101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~----i~H~dlkp~Ni 176 (313)
T 1t46_A 101 PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN----CIHRDLAARNI 176 (313)
T ss_dssp SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT----CCCSCCSGGGE
T ss_pred CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCC----eecCCCccceE
Confidence 99999999999999999987543 3899999999999999999999654 99999999999
Q ss_pred eeCCCCcEEEEeeccceecCCCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccc
Q 007680 405 LLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEM 483 (593)
Q Consensus 405 ll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~ellt-g~~pf~~~~~~~~ 483 (593)
+++.++.+||+|||++................+|+.|+|||++.+..++.++||||||+++|||+| |+.||.......
T Consensus 177 l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~- 255 (313)
T 1t46_A 177 LLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS- 255 (313)
T ss_dssp EEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH-
T ss_pred EEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchh-
Confidence 999999999999999987765543333344557889999999988899999999999999999999 999997643221
Q ss_pred hHHHHHHHhcCCchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhhh
Q 007680 484 SLRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVKF 554 (593)
Q Consensus 484 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 554 (593)
............ ..+..++.++.+++.+||+.||++|||+.|++++|+++....
T Consensus 256 ~~~~~~~~~~~~-----------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 309 (313)
T 1t46_A 256 KFYKMIKEGFRM-----------------LSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISES 309 (313)
T ss_dssp HHHHHHHHTCCC-----------------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred HHHHHhccCCCC-----------------CCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHh
Confidence 111212111110 011233567899999999999999999999999999987654
No 66
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=3.3e-43 Score=363.38 Aligned_cols=250 Identities=24% Similarity=0.292 Sum_probs=202.1
Q ss_pred hhhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhh---HHHHHHHHHHHHHHhhc-CCCCcceeeeeeecCCceE
Q 007680 270 ATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQL---ERAFRSFDSECEVLRNV-RHRNLIKILSSYSNPDFKA 344 (593)
Q Consensus 270 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 344 (593)
..++|++.+.||+|+||.||+|+.+ +|+.||+|+++... ....+.+.+|..+++.+ +||||+++++++.+.+..+
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 100 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF 100 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEE
Confidence 3578999999999999999999976 68999999998652 33456688999999988 7999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecC
Q 007680 345 LVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424 (593)
Q Consensus 345 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~ 424 (593)
+||||+++|+|.+++...+. +++..+..++.||+.||+|||+++ |+||||||+||+++.++.+||+|||+++...
T Consensus 101 lv~E~~~gg~L~~~l~~~~~-~~~~~~~~~~~qi~~aL~~LH~~g----ivHrDlkp~NILl~~~g~ikL~DFG~a~~~~ 175 (353)
T 3txo_A 101 FVMEFVNGGDLMFHIQKSRR-FDEARARFYAAEIISALMFLHDKG----IIYRDLKLDNVLLDHEGHCKLADFGMCKEGI 175 (353)
T ss_dssp EEEECCCSCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHTT----CBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred EEEeCCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCC----CcccCCCHHHEEECCCCCEEEccccceeecc
Confidence 99999999999999987654 999999999999999999999654 9999999999999999999999999998543
Q ss_pred CCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhhhh
Q 007680 425 EGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDAN 504 (593)
Q Consensus 425 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 504 (593)
... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+... .
T Consensus 176 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~--~~~~~i~~~-----------~ 240 (353)
T 3txo_A 176 CNG--VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENED--DLFEAILND-----------E 240 (353)
T ss_dssp C-----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHC-----------C
T ss_pred cCC--ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHH--HHHHHHHcC-----------C
Confidence 222 1234457999999999998889999999999999999999999999763221 111111110 0
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCH------HHHHHH
Q 007680 505 LVREEQAFSAKMDCILSIMDFALDCCMESPDMRINM------TDAAAK 546 (593)
Q Consensus 505 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~------~evl~~ 546 (593)
. ..+..++.++.+++.+||+.||++||++ .|+++|
T Consensus 241 ~-------~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~h 281 (353)
T 3txo_A 241 V-------VYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRH 281 (353)
T ss_dssp C-------CCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTS
T ss_pred C-------CCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhC
Confidence 0 0011235578999999999999999998 777765
No 67
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=1.5e-42 Score=355.40 Aligned_cols=252 Identities=23% Similarity=0.327 Sum_probs=200.7
Q ss_pred hhhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhh-HHHHHHHHHHHHHHhhcCCCCcceeeeeeecCC------
Q 007680 270 ATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSYSNPD------ 341 (593)
Q Consensus 270 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 341 (593)
..++|++.+.||+|+||.||+|++. +|+.||||+++... ....+.+.+|++++++++||||+++++++.+.+
T Consensus 4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 83 (332)
T 3qd2_B 4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQE 83 (332)
T ss_dssp HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHH
T ss_pred hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhh
Confidence 4578999999999999999999976 79999999997543 334578899999999999999999999886543
Q ss_pred ---------------------------------------------------ceEEEEeccCCCCHHHHHhhCCC--CCCH
Q 007680 342 ---------------------------------------------------FKALVLEFMPNGSLEKWLYSHNY--FLDI 368 (593)
Q Consensus 342 ---------------------------------------------------~~~lv~e~~~~gsL~~~l~~~~~--~l~~ 368 (593)
..++||||+++++|.+++..... ..++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~ 163 (332)
T 3qd2_B 84 EMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREH 163 (332)
T ss_dssp HHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCH
T ss_pred hhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhh
Confidence 27999999999999999987654 4567
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCCCCCc----------cccccccCC
Q 007680 369 LERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDS----------VRQTMTMAT 438 (593)
Q Consensus 369 ~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~----------~~~~~~~gt 438 (593)
..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++........ .......||
T Consensus 164 ~~~~~i~~qi~~aL~~LH~~~----ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt 239 (332)
T 3qd2_B 164 GVCLHIFIQIAEAVEFLHSKG----LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGT 239 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHTT----EECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-C
T ss_pred HHHHHHHHHHHHHHHHHHhCC----eeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCC
Confidence 778999999999999999654 999999999999999999999999999987654321 122345699
Q ss_pred ccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhhhhhhhhhhhhhhhHHH
Q 007680 439 IGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLVREEQAFSAKMDC 518 (593)
Q Consensus 439 ~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (593)
+.|+|||++.+..++.++|||||||++|||++|..|+.... ........ . .........
T Consensus 240 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~----~~~~~~~~-----------~------~~~~~~~~~ 298 (332)
T 3qd2_B 240 KLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERV----RIITDVRN-----------L------KFPLLFTQK 298 (332)
T ss_dssp GGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHH----HHHHHHHT-----------T------CCCHHHHHH
T ss_pred cCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHH----HHHHHhhc-----------c------CCCcccccC
Confidence 99999999999999999999999999999999987753311 00000000 0 001112233
Q ss_pred HHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 519 ILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 519 ~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
++++.+++.+||+.||++|||+.|+++|
T Consensus 299 ~~~~~~li~~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 299 YPQEHMMVQDMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp CHHHHHHHHHHHCSSGGGSCCHHHHHHS
T ss_pred ChhHHHHHHHHccCCCCcCCCHHHHhhc
Confidence 5577999999999999999999999875
No 68
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=3.9e-43 Score=354.78 Aligned_cols=250 Identities=24% Similarity=0.315 Sum_probs=197.7
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhhH--------------------------HHHHHHHHHHHHHh
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLE--------------------------RAFRSFDSECEVLR 323 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------------------------~~~~~~~~E~~~l~ 323 (593)
.++|++.+.||+|+||.||+|+.. +++.||+|++..... ...+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 468999999999999999999965 689999999975421 12356889999999
Q ss_pred hcCCCCcceeeeeeec--CCceEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCC
Q 007680 324 NVRHRNLIKILSSYSN--PDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKP 401 (593)
Q Consensus 324 ~l~h~niv~l~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp 401 (593)
+++||||+++++++.+ .+..++||||+++++|.+++... .+++.++..++.|++.||+|||+++ |+||||||
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~----ivH~Dlkp 165 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK--PLSEDQARFYFQDLIKGIEYLHYQK----IIHRDIKP 165 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSS--CCCHHHHHHHHHHHHHHHHHHHHTT----EECCCCCG
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHHCC----eeccCCCH
Confidence 9999999999999986 56889999999999998865433 4999999999999999999999655 99999999
Q ss_pred CCeeeCCCCcEEEEeeccceecCCCCCccccccccCCccccCccccCCCC---CCccchHHHHHHHHHHHHhCCCCCCcc
Q 007680 402 TNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGI---VSAKCDVYSYGVLLMETFTRKRPTDEM 478 (593)
Q Consensus 402 ~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~s~~~DvwSlGvvl~elltg~~pf~~~ 478 (593)
+||+++.++.+||+|||++........ ......||+.|+|||++.+.. ++.++|||||||++|||++|+.||...
T Consensus 166 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~ 243 (298)
T 2zv2_A 166 SNLLVGEDGHIKIADFGVSNEFKGSDA--LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDE 243 (298)
T ss_dssp GGEEECTTSCEEECCCTTCEECSSSSC--EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred HHEEECCCCCEEEecCCCccccccccc--cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCc
Confidence 999999999999999999987654332 223457999999999987765 478899999999999999999999763
Q ss_pred ccccchHHHHHHHhcCCchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 479 FIGEMSLRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
.. ......+.... ...+....+++++.+++.+||+.||++|||+.|+++|
T Consensus 244 ~~--~~~~~~~~~~~----------------~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~h 293 (298)
T 2zv2_A 244 RI--MCLHSKIKSQA----------------LEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLH 293 (298)
T ss_dssp SH--HHHHHHHHHCC----------------CCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred cH--HHHHHHHhccc----------------CCCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhcC
Confidence 21 11111111100 0001112345678999999999999999999999865
No 69
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=1.4e-42 Score=348.49 Aligned_cols=253 Identities=27% Similarity=0.434 Sum_probs=206.1
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhhH-------HHHHHHHHHHHHHhhcCCCCcceeeeeeecCCc
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLE-------RAFRSFDSECEVLRNVRHRNLIKILSSYSNPDF 342 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 342 (593)
.++|++.+.||+|+||.||+|++. +++.||+|++..... ...+.+.+|+.++++++||||+++++++.+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 468999999999999999999975 789999999865321 11267899999999999999999999987665
Q ss_pred eEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCC--eEecCCCCCCeeeCCCCc-----EEEE
Q 007680 343 KALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVH--IIHCDLKPTNILLDENMV-----AHVS 415 (593)
Q Consensus 343 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~--ivH~Dlkp~NIll~~~~~-----~kL~ 415 (593)
++||||+++++|.+++......+++..+..++.|++.||+|||+ .+ |+||||||+||+++.++. +||+
T Consensus 97 -~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~----~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~ 171 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQN----QNPPIVHRDLRSPNIFLQSLDENAPVCAKVA 171 (287)
T ss_dssp -EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHT----SSSCCBCSCCSGGGEEESCCCTTCSCCEEEC
T ss_pred -eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHh----CCCCeecCCCCcceEEEeccCCCCceeEEeC
Confidence 79999999999999998777779999999999999999999994 55 999999999999988776 9999
Q ss_pred eeccceecCCCCCccccccccCCccccCccccC--CCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhc
Q 007680 416 DFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGL--EGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESL 493 (593)
Q Consensus 416 Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~ 493 (593)
|||+++.... ......||+.|+|||++. ...++.++|||||||++|||++|+.||..................
T Consensus 172 Dfg~~~~~~~-----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 246 (287)
T 4f0f_A 172 DFGLSQQSVH-----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEG 246 (287)
T ss_dssp CCTTCBCCSS-----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSC
T ss_pred CCCccccccc-----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccC
Confidence 9999875432 223456899999999984 456889999999999999999999999775433322222222111
Q ss_pred CCchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHh
Q 007680 494 PHGLTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKI 550 (593)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 550 (593)
. ....+..+++++.+++.+||+.||++|||+.|+++.|+++
T Consensus 247 ~----------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 247 L----------------RPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp C----------------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred C----------------CCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 0 0011123456889999999999999999999999999864
No 70
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.7e-42 Score=350.18 Aligned_cols=265 Identities=25% Similarity=0.357 Sum_probs=208.2
Q ss_pred hhccccccccCccCcccEEEEEeCCCCeEEEEEeehhhHHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEEEecc
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVLEFM 350 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 350 (593)
.++|++.+.||+|+||.||+|++. ++.||+|++.... ..+.+.+|++++++++||||+++++++.+ ..++||||+
T Consensus 7 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~ 81 (307)
T 2eva_A 7 YKEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESES--ERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYA 81 (307)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSSTT--HHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECC
T ss_pred HhHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecChh--HHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcC
Confidence 467999999999999999999985 7899999987543 34678999999999999999999998874 479999999
Q ss_pred CCCCHHHHHhhCCC--CCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCc-EEEEeeccceecCCCC
Q 007680 351 PNGSLEKWLYSHNY--FLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMV-AHVSDFGIYKLLGEGE 427 (593)
Q Consensus 351 ~~gsL~~~l~~~~~--~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~-~kL~Dfg~a~~~~~~~ 427 (593)
++++|.+++..... .+++..+..++.|+++||+|||+.+ ..+|+||||||+||+++.++. +||+|||++......
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~-~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~- 159 (307)
T 2eva_A 82 EGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQ-PKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH- 159 (307)
T ss_dssp TTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCS-SSCCCCCCCSGGGEEEETTTTEEEECCCCC--------
T ss_pred CCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCC-CCCeecCCCChhHEEEeCCCCEEEEcccccccccccc-
Confidence 99999999987654 4789999999999999999999733 256999999999999998886 799999998765432
Q ss_pred CccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhhhhhhh
Q 007680 428 DSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLVR 507 (593)
Q Consensus 428 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 507 (593)
.....||+.|+|||++.+..++.++||||||+++|||++|+.||...................
T Consensus 160 ----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~------------- 222 (307)
T 2eva_A 160 ----MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTR------------- 222 (307)
T ss_dssp ---------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCC-------------
T ss_pred ----cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCC-------------
Confidence 123458999999999999999999999999999999999999997643222111111111100
Q ss_pred hhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhhhcchhhccCC
Q 007680 508 EEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVKFLDDAAATNW 563 (593)
Q Consensus 508 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~~~~~ 563 (593)
......++..+.+++.+||+.||++|||+.|++++|+.+...+.....+..|
T Consensus 223 ----~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~~~~~~~~ 274 (307)
T 2eva_A 223 ----PPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADEPLQY 274 (307)
T ss_dssp ----CCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCCCTTSCCCC
T ss_pred ----CCcccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhccCCCCcccc
Confidence 0111234567899999999999999999999999999998887555444433
No 71
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=4.4e-43 Score=359.74 Aligned_cols=247 Identities=24% Similarity=0.390 Sum_probs=204.6
Q ss_pred hhccccccccCccCcccEEEEEe-CCCCeEEEEEeehhhH---HHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEE
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTI-SDGTDVAIKVFNLQLE---RAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALV 346 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 346 (593)
.++|.+.+.||+|+||.||+|.+ .+++.||+|++..... .....+.+|+.+++.++||||+++++++..++..++|
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 46899999999999999999997 4789999999986532 2245788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCCC
Q 007680 347 LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEG 426 (593)
Q Consensus 347 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~ 426 (593)
|||+ +|+|.+++...+. +++.++..++.|++.||+|||+++ |+||||||+||++++++.+||+|||++......
T Consensus 88 ~E~~-~g~l~~~l~~~~~-l~~~~~~~i~~qi~~aL~~LH~~g----ivH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~ 161 (336)
T 3h4j_B 88 IEYA-GGELFDYIVEKKR-MTEDEGRRFFQQIICAIEYCHRHK----IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG 161 (336)
T ss_dssp ECCC-CEEHHHHHHHHCS-CCHHHHHHHHHHHHHHHHHHHHHT----CCCCCCSTTTEEECTTCCEEECCSSCTBTTTTS
T ss_pred EECC-CCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCC----eEecCCchhhEEEcCCCCEEEEEeccceeccCC
Confidence 9999 7899999877654 999999999999999999999665 999999999999999999999999999876543
Q ss_pred CCccccccccCCccccCccccCCCCC-CccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhhhhh
Q 007680 427 EDSVRQTMTMATIGYMAPEYGLEGIV-SAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANL 505 (593)
Q Consensus 427 ~~~~~~~~~~gt~~y~aPE~~~~~~~-s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 505 (593)
. ......||+.|+|||++.+..+ ++++|||||||++|+|++|+.||........ ... +...
T Consensus 162 ~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~-------------~~~-i~~~- 223 (336)
T 3h4j_B 162 N---FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL-------------FKK-VNSC- 223 (336)
T ss_dssp B---TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC-------------BCC-CCSS-
T ss_pred c---ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH-------------HHH-HHcC-
Confidence 2 2234569999999999988776 7899999999999999999999976321110 000 0000
Q ss_pred hhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 506 VREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 506 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
....+..+++++.+++.+||+.||++|||++|+++|
T Consensus 224 -----~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 224 -----VYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp -----CCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred -----CCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 001112245678999999999999999999999986
No 72
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=4.7e-43 Score=352.40 Aligned_cols=267 Identities=22% Similarity=0.311 Sum_probs=203.6
Q ss_pred hccccccccCccCcccEEEEEeCCCCeEEEEEeehhh--HHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEEEec
Q 007680 272 DEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVLEF 349 (593)
Q Consensus 272 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 349 (593)
++|++.+.||+|+||.||+|+..+|+.||+|+++... ....+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 5799999999999999999999889999999996543 22346788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCCCCCc
Q 007680 350 MPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDS 429 (593)
Q Consensus 350 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~ 429 (593)
+++ +|.+++......+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++........
T Consensus 82 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~----i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 155 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR----VLHRDLKPQNLLINREGELKIADFGLARAFGIPVR- 155 (288)
T ss_dssp CSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTT----CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC----
T ss_pred cCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC----eecCCCCHHHEEEcCCCCEEEeECccccccCcccc-
Confidence 975 999999877667999999999999999999999654 99999999999999999999999999987643221
Q ss_pred cccccccCCccccCccccCCC-CCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHh-cC--Cchhhhh----
Q 007680 430 VRQTMTMATIGYMAPEYGLEG-IVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKES-LP--HGLTEVV---- 501 (593)
Q Consensus 430 ~~~~~~~gt~~y~aPE~~~~~-~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~-~~--~~~~~~~---- 501 (593)
......+|+.|+|||++.+. .++.++|||||||++|||++|+.||......+ ......... .+ .......
T Consensus 156 -~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (288)
T 1ob3_A 156 -KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD-QLMRIFRILGTPNSKNWPNVTELPK 233 (288)
T ss_dssp -------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCTTTSTTGGGSTT
T ss_pred -ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHHCCCChhhchhhhcccc
Confidence 22334689999999998764 58999999999999999999999997643221 111111111 00 0010000
Q ss_pred -hhhhhhh--hhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 502 -DANLVRE--EQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 502 -~~~~~~~--~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
+...... .........+++++.+++.+||+.||++|||++|+++|
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 234 YDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp CCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 0000000 00000112345678999999999999999999999875
No 73
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=4.5e-42 Score=357.99 Aligned_cols=250 Identities=24% Similarity=0.311 Sum_probs=205.2
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhh---HHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEE
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALV 346 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 346 (593)
.++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv 93 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV 93 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 478999999999999999999976 68899999997653 23456788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCCC
Q 007680 347 LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEG 426 (593)
Q Consensus 347 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~ 426 (593)
|||+++|+|.+++..... +++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++..+...
T Consensus 94 ~e~~~gg~L~~~l~~~~~-l~~~~~~~~~~qi~~aL~~LH~~g----ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 168 (384)
T 4fr4_A 94 VDLLLGGDLRYHLQQNVH-FKEETVKLFICELVMALDYLQNQR----IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE 168 (384)
T ss_dssp ECCCTTEEHHHHHHTTCC-CCHHHHHHHHHHHHHHHHHHHHTT----EECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EecCCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCC----ceeccCcHHHeEECCCCCEEEeccceeeeccCC
Confidence 999999999999987654 999999999999999999999655 999999999999999999999999999876543
Q ss_pred CCccccccccCCccccCccccCC---CCCCccchHHHHHHHHHHHHhCCCCCCccccccc-hHHHHHHHhcCCchhhhhh
Q 007680 427 EDSVRQTMTMATIGYMAPEYGLE---GIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEM-SLRRWVKESLPHGLTEVVD 502 (593)
Q Consensus 427 ~~~~~~~~~~gt~~y~aPE~~~~---~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 502 (593)
. ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ ..........
T Consensus 169 ~---~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~--------- 236 (384)
T 4fr4_A 169 T---QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTV--------- 236 (384)
T ss_dssp C---CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHCC---------
T ss_pred C---ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhcc---------
Confidence 2 2344679999999999864 4589999999999999999999999975322111 1111111000
Q ss_pred hhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCC-HHHHHHH
Q 007680 503 ANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRIN-MTDAAAK 546 (593)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~evl~~ 546 (593)
...+..++.++.+++.+||+.||++||+ ++++++|
T Consensus 237 ---------~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~h 272 (384)
T 4fr4_A 237 ---------VTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNF 272 (384)
T ss_dssp ---------CCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHTS
T ss_pred ---------cCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHcC
Confidence 0111234567899999999999999998 6766653
No 74
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=1.6e-42 Score=353.32 Aligned_cols=246 Identities=24% Similarity=0.294 Sum_probs=206.2
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhhH---HHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEE
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLE---RAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALV 346 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 346 (593)
.++|++.+.||+|+||.||+|+.+ +|+.||+|+++.... ...+.+.+|..+++.++||||+++++++.+.+..++|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 468999999999999999999976 799999999987532 3456788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCCC
Q 007680 347 LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEG 426 (593)
Q Consensus 347 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~ 426 (593)
|||+++|+|.+++..... +++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 85 ~e~~~gg~L~~~l~~~~~-~~~~~~~~~~~qi~~aL~~LH~~----~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~ 159 (318)
T 1fot_A 85 MDYIEGGELFSLLRKSQR-FPNPVAKFYAAEVCLALEYLHSK----DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV 159 (318)
T ss_dssp ECCCCSCBHHHHHHHTSS-CCHHHHHHHHHHHHHHHHHHHTT----TEECCCCCGGGEEECTTSCEEECCCSSCEECSSC
T ss_pred EeCCCCCCHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHC----CccccCCChheEEEcCCCCEEEeecCcceecCCc
Confidence 999999999999987654 89999999999999999999954 5999999999999999999999999999876432
Q ss_pred CCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhhhhhh
Q 007680 427 EDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLV 506 (593)
Q Consensus 427 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (593)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+.. ...
T Consensus 160 -----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--~~~~~i~~-----------~~~- 220 (318)
T 1fot_A 160 -----TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTM--KTYEKILN-----------AEL- 220 (318)
T ss_dssp -----BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHHHHH-----------CCC-
T ss_pred -----cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH--HHHHHHHh-----------CCC-
Confidence 23357999999999999999999999999999999999999999763211 11111110 000
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhcccCCCCCCC-----CHHHHHHH
Q 007680 507 REEQAFSAKMDCILSIMDFALDCCMESPDMRI-----NMTDAAAK 546 (593)
Q Consensus 507 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 546 (593)
..+..++.++.+++.+||..||++|| +++|+++|
T Consensus 221 ------~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h 259 (318)
T 1fot_A 221 ------RFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH 259 (318)
T ss_dssp ------CCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred ------CCCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence 00112355789999999999999999 88998876
No 75
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=1.7e-42 Score=361.13 Aligned_cols=250 Identities=22% Similarity=0.305 Sum_probs=201.5
Q ss_pred cccccccCccCcccEEEEEeC-CCCeEEEEEeehhhHHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEEEeccCC
Q 007680 274 FNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPN 352 (593)
Q Consensus 274 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 352 (593)
+...+.||+|+||.||+|... +|+.||+|+++.......+.+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 91 ~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~ 170 (373)
T 2x4f_A 91 VSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDG 170 (373)
T ss_dssp EEEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred eecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCC
Confidence 334678999999999999965 7899999999876555667899999999999999999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeee--CCCCcEEEEeeccceecCCCCCcc
Q 007680 353 GSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILL--DENMVAHVSDFGIYKLLGEGEDSV 430 (593)
Q Consensus 353 gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll--~~~~~~kL~Dfg~a~~~~~~~~~~ 430 (593)
++|.+++......+++..+..++.|++.||+|||+++ |+||||||+||++ +.++.+||+|||+++.......
T Consensus 171 ~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~----ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~-- 244 (373)
T 2x4f_A 171 GELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMY----ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK-- 244 (373)
T ss_dssp CEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTT----EECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB--
T ss_pred CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC----cccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc--
Confidence 9999999877666999999999999999999999654 9999999999999 5678999999999988754332
Q ss_pred ccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhhhhhhhhhh
Q 007680 431 RQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLVREEQ 510 (593)
Q Consensus 431 ~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (593)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...... ..+..........
T Consensus 245 -~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~-~~~~~i~~~~~~~--------------- 307 (373)
T 2x4f_A 245 -LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDA-ETLNNILACRWDL--------------- 307 (373)
T ss_dssp -CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHHHHHHTCCCS---------------
T ss_pred -cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhccCCC---------------
Confidence 23346999999999999999999999999999999999999999763221 1111111111100
Q ss_pred hhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 511 AFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 511 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
.......+++++.+++.+||+.||++|||+.|+++|
T Consensus 308 ~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~h 343 (373)
T 2x4f_A 308 EDEEFQDISEEAKEFISKLLIKEKSWRISASEALKH 343 (373)
T ss_dssp CSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ChhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 001112345688999999999999999999999985
No 76
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=1.1e-42 Score=349.93 Aligned_cols=261 Identities=25% Similarity=0.412 Sum_probs=198.7
Q ss_pred hhhccccccccCccCcccEEEEEeCCCCeEEEEEeehhh--HHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEEE
Q 007680 270 ATDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVL 347 (593)
Q Consensus 270 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 347 (593)
..++|++.+.||+|+||.||+|++. ..||+|+++... ....+.+.+|++++++++||||++++++. ..+..++||
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~ 98 (289)
T 3og7_A 22 PDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVT 98 (289)
T ss_dssp CTTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEE
T ss_pred CccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEE
Confidence 3568999999999999999999864 469999987542 44557899999999999999999999965 556689999
Q ss_pred eccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCCCC
Q 007680 348 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGE 427 (593)
Q Consensus 348 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~ 427 (593)
||+++++|.+++......+++.++..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++.......
T Consensus 99 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~----i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 174 (289)
T 3og7_A 99 QWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS----IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWS 174 (289)
T ss_dssp ECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTT----CCCSCCCGGGEEEETTTEEEECCCC---------
T ss_pred EecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCC----cccccCccceEEECCCCCEEEccceecccccccc
Confidence 999999999999877667999999999999999999999654 9999999999999999999999999998665433
Q ss_pred CccccccccCCccccCccccC---CCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHh-cCCchhhhhhh
Q 007680 428 DSVRQTMTMATIGYMAPEYGL---EGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKES-LPHGLTEVVDA 503 (593)
Q Consensus 428 ~~~~~~~~~gt~~y~aPE~~~---~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 503 (593)
.........||+.|+|||++. +..++.++||||||+++|||++|+.||......+ .....+... ......
T Consensus 175 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~----- 248 (289)
T 3og7_A 175 GSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD-QIIEMVGRGSLSPDLS----- 248 (289)
T ss_dssp ---------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHH-HHHHHHHHTSCCCCTT-----
T ss_pred ccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHH-HHHHHhcccccCcchh-----
Confidence 332334456899999999886 5678999999999999999999999997643222 122222111 111000
Q ss_pred hhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhh
Q 007680 504 NLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKV 552 (593)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 552 (593)
.....+++++.+++.+||+.||++|||+.|+++.|+++..
T Consensus 249 ---------~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 249 ---------KVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp ---------SSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred ---------hccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 0112345688999999999999999999999999998753
No 77
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=2.5e-42 Score=362.35 Aligned_cols=276 Identities=18% Similarity=0.238 Sum_probs=209.3
Q ss_pred hhccccccccCcc--CcccEEEEEeC-CCCeEEEEEeehhh--HHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEE
Q 007680 271 TDEFNECNLLGTS--SFGSVYKGTIS-DGTDVAIKVFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKAL 345 (593)
Q Consensus 271 ~~~~~~~~~lg~G--~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 345 (593)
.++|++.+.||+| +||.||+|+.. +|+.||||+++... ....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 5789999999999 99999999976 79999999998653 4455778899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecC
Q 007680 346 VLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424 (593)
Q Consensus 346 v~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~ 424 (593)
||||+++|+|.+++.... ..+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||.+....
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~----ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~ 179 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMG----YVHRSVKASHILISVDGKVYLSGLRSNLSMI 179 (389)
T ss_dssp EEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTT----EECCCCSGGGEEECTTCCEEECCGGGCEECE
T ss_pred EEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC----eecCCCCHHHEEEcCCCCEEEcccccceeec
Confidence 999999999999998753 35999999999999999999999654 9999999999999999999999999887653
Q ss_pred CCCCc-----cccccccCCccccCccccCC--CCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCch
Q 007680 425 EGEDS-----VRQTMTMATIGYMAPEYGLE--GIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGL 497 (593)
Q Consensus 425 ~~~~~-----~~~~~~~gt~~y~aPE~~~~--~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 497 (593)
..... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+....... ........+...
T Consensus 180 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~-~~~~~~~~~~~~ 258 (389)
T 3gni_B 180 SHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQML-LEKLNGTVPCLL 258 (389)
T ss_dssp ETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHH-HHC---------
T ss_pred cccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHH-HHHhcCCCCccc
Confidence 22111 11223468999999999887 57999999999999999999999999764322211 111111100000
Q ss_pred -----------------------hhhhhhh----hhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH--HH
Q 007680 498 -----------------------TEVVDAN----LVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK--LK 548 (593)
Q Consensus 498 -----------------------~~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~--L~ 548 (593)
.+..... ........+....+++++.+|+.+||+.||++|||+.|+++| ++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~ 338 (389)
T 3gni_B 259 DTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFK 338 (389)
T ss_dssp -----------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGG
T ss_pred cccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHH
Confidence 0000000 000000111233456789999999999999999999999987 55
Q ss_pred Hhh
Q 007680 549 KIK 551 (593)
Q Consensus 549 ~i~ 551 (593)
++.
T Consensus 339 ~~~ 341 (389)
T 3gni_B 339 QIK 341 (389)
T ss_dssp GC-
T ss_pred HHh
Confidence 544
No 78
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=1.4e-42 Score=363.08 Aligned_cols=259 Identities=19% Similarity=0.253 Sum_probs=204.1
Q ss_pred hhhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhh---HHHHHHHHHHHHHHhhc-CCCCcceeeeeeecCCceE
Q 007680 270 ATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQL---ERAFRSFDSECEVLRNV-RHRNLIKILSSYSNPDFKA 344 (593)
Q Consensus 270 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 344 (593)
..++|++.+.||+|+||.||+|+.+ +++.||+|++++.. ....+.+..|..++.++ +||||+++++++.+.+..+
T Consensus 50 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 129 (396)
T 4dc2_A 50 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF 129 (396)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred ChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEE
Confidence 3578999999999999999999976 68899999998653 23345678899999887 8999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecC
Q 007680 345 LVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424 (593)
Q Consensus 345 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~ 424 (593)
+||||+++|+|.+++...+. +++..+..++.||+.||+|||+++ |+||||||+||+++.++.+||+|||+++...
T Consensus 130 lV~E~~~gg~L~~~l~~~~~-l~~~~~~~~~~qi~~aL~~LH~~g----ivHrDLKp~NILl~~~g~ikL~DFGla~~~~ 204 (396)
T 4dc2_A 130 FVIEYVNGGDLMFHMQRQRK-LPEEHARFYSAEISLALNYLHERG----IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 204 (396)
T ss_dssp EEEECCTTCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHTT----CBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EEEEcCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCC----EEeccCCHHHEEECCCCCEEEeecceeeecc
Confidence 99999999999999987654 999999999999999999999654 9999999999999999999999999998633
Q ss_pred CCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhhhh
Q 007680 425 EGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDAN 504 (593)
Q Consensus 425 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 504 (593)
.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+... ....+.+...
T Consensus 205 ~~~~--~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~---------~~~~~~~~~~ 273 (396)
T 4dc2_A 205 RPGD--TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPD---------QNTEDYLFQV 273 (396)
T ss_dssp CTTC--CBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC---------------CCHHHHHHH
T ss_pred cCCC--ccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccc---------hhhHHHHHHH
Confidence 2221 2344679999999999999999999999999999999999999996532111000 0000000000
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCH------HHHHHH
Q 007680 505 LVREEQAFSAKMDCILSIMDFALDCCMESPDMRINM------TDAAAK 546 (593)
Q Consensus 505 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~------~evl~~ 546 (593)
+.... ...+..++.++.+++.+||+.||++||++ .|+++|
T Consensus 274 i~~~~--~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~H 319 (396)
T 4dc2_A 274 ILEKQ--IRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 319 (396)
T ss_dssp HHHCC--CCCCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHS
T ss_pred Hhccc--cCCCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcC
Confidence 10000 01112345678999999999999999985 567665
No 79
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=5.7e-43 Score=357.69 Aligned_cols=263 Identities=22% Similarity=0.412 Sum_probs=197.5
Q ss_pred HhhhccccccccCccCcccEEEEEeCC-C---CeEEEEEeehh--hHHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCc
Q 007680 269 RATDEFNECNLLGTSSFGSVYKGTISD-G---TDVAIKVFNLQ--LERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDF 342 (593)
Q Consensus 269 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~-~---~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 342 (593)
...++|++.+.||+|+||.||+|++.. + ..||+|+++.. .....+.+.+|++++++++||||+++++++...+.
T Consensus 20 i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 99 (323)
T 3qup_A 20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRA 99 (323)
T ss_dssp CC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC--
T ss_pred cChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccc
Confidence 346789999999999999999998653 3 27999999765 33456789999999999999999999999987765
Q ss_pred e------EEEEeccCCCCHHHHHhhCC-----CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCc
Q 007680 343 K------ALVLEFMPNGSLEKWLYSHN-----YFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMV 411 (593)
Q Consensus 343 ~------~lv~e~~~~gsL~~~l~~~~-----~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~ 411 (593)
. ++||||+++|+|.+++.... ..+++.++..++.|++.||+|||+++ |+||||||+||+++.++.
T Consensus 100 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~----ivH~Dikp~NIli~~~~~ 175 (323)
T 3qup_A 100 KGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN----FIHRDLAARNCMLAEDMT 175 (323)
T ss_dssp -----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTT----CCCSCCSGGGEEECTTSC
T ss_pred ccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCC----cccCCCCcceEEEcCCCC
Confidence 5 99999999999999986532 14899999999999999999999654 999999999999999999
Q ss_pred EEEEeeccceecCCCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccchHHHHHH
Q 007680 412 AHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRRWVK 490 (593)
Q Consensus 412 ~kL~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~ellt-g~~pf~~~~~~~~~~~~~~~ 490 (593)
+||+|||+++...............+++.|+|||.+.+..++.++|||||||++|||++ |+.||...... .......
T Consensus 176 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--~~~~~~~ 253 (323)
T 3qup_A 176 VCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENA--EIYNYLI 253 (323)
T ss_dssp EEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHHHHH
T ss_pred EEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChH--HHHHHHh
Confidence 99999999987655443333344557889999999999999999999999999999999 99999764322 1111111
Q ss_pred HhcCCchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhhh
Q 007680 491 ESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVKF 554 (593)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 554 (593)
... ....+..++.++.+++.+||+.||++|||+.++++.|+++....
T Consensus 254 ~~~-----------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~ 300 (323)
T 3qup_A 254 GGN-----------------RLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHL 300 (323)
T ss_dssp TTC-----------------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred cCC-----------------CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 110 01111234567899999999999999999999999999998664
No 80
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=9.9e-43 Score=352.24 Aligned_cols=270 Identities=21% Similarity=0.358 Sum_probs=210.7
Q ss_pred hhccccccccCccCcccEEEEEe-----CCCCeEEEEEeehhh-HHHHHHHHHHHHHHhhcCCCCcceeeeeeecC--Cc
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTI-----SDGTDVAIKVFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSYSNP--DF 342 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~ 342 (593)
.+.|++.+.||+|+||.||+|++ .+++.||+|+++... ....+.+.+|++++++++||||+++++++... ..
T Consensus 20 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 99 (302)
T 4e5w_A 20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG 99 (302)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CC
T ss_pred hhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCce
Confidence 35689999999999999999983 368999999997553 23456789999999999999999999999876 66
Q ss_pred eEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeecccee
Q 007680 343 KALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKL 422 (593)
Q Consensus 343 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~ 422 (593)
.++||||+++++|.+++......+++.++..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++..
T Consensus 100 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~----i~H~dikp~Nil~~~~~~~kl~Dfg~~~~ 175 (302)
T 4e5w_A 100 IKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQ----YVHRDLAARNVLVESEHQVKIGDFGLTKA 175 (302)
T ss_dssp EEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTT----EECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred EEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCC----cccCCCchheEEEcCCCCEEECccccccc
Confidence 89999999999999999776666999999999999999999999655 99999999999999999999999999988
Q ss_pred cCCCCCc-cccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCc---hh
Q 007680 423 LGEGEDS-VRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHG---LT 498 (593)
Q Consensus 423 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~---~~ 498 (593)
....... .......+|..|+|||++.+..++.++||||||+++|||++|..|+..... .......+.. ..
T Consensus 176 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~~~~~~ 249 (302)
T 4e5w_A 176 IETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMA------LFLKMIGPTHGQMTV 249 (302)
T ss_dssp CCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHH------HHHHHHCSCCGGGHH
T ss_pred ccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhh------HHhhccCCcccccCH
Confidence 7654332 123345688889999999888999999999999999999999998754211 1111000100 00
Q ss_pred hhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhh
Q 007680 499 EVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIK 551 (593)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 551 (593)
..+...+ ......+.+..+++++.+++.+||+.||++|||+.|+++.|+++.
T Consensus 250 ~~~~~~~-~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 250 TRLVNTL-KEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp HHHHHHH-HTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHH-hccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 0000000 011111122345678999999999999999999999999999874
No 81
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=8.1e-43 Score=359.15 Aligned_cols=252 Identities=23% Similarity=0.311 Sum_probs=206.0
Q ss_pred HHhhhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhh---HHHHHHHHHHHHHHhhc-CCCCcceeeeeeecCCc
Q 007680 268 QRATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQL---ERAFRSFDSECEVLRNV-RHRNLIKILSSYSNPDF 342 (593)
Q Consensus 268 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 342 (593)
....++|++.+.||+|+||.||+|+.+ +|+.||+|+++... ....+.+..|..++..+ +||||+++++++.+.+.
T Consensus 13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~ 92 (345)
T 1xjd_A 13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN 92 (345)
T ss_dssp ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE
Confidence 445789999999999999999999976 68999999998753 23456678899999887 99999999999999999
Q ss_pred eEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeecccee
Q 007680 343 KALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKL 422 (593)
Q Consensus 343 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~ 422 (593)
.++||||+++|+|.+++..... +++.++..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++.
T Consensus 93 ~~lv~E~~~gg~L~~~l~~~~~-~~~~~~~~~~~qi~~aL~~LH~~~----ivHrDlkp~NIll~~~g~vkL~DFG~a~~ 167 (345)
T 1xjd_A 93 LFFVMEYLNGGDLMYHIQSCHK-FDLSRATFYAAEIILGLQFLHSKG----IVYRDLKLDNILLDKDGHIKIADFGMCKE 167 (345)
T ss_dssp EEEEEECCTTCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHTT----CBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEEEeCCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCC----eEeCCCChhhEEECCCCCEEEeEChhhhh
Confidence 9999999999999999987554 999999999999999999999654 99999999999999999999999999986
Q ss_pred cCCCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhh
Q 007680 423 LGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVD 502 (593)
Q Consensus 423 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 502 (593)
...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+....+
T Consensus 168 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--~~~~~i~~~~~-------- 235 (345)
T 1xjd_A 168 NMLGDA--KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE--ELFHSIRMDNP-------- 235 (345)
T ss_dssp CCCTTC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHCCC--------
T ss_pred cccCCC--cccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHH--HHHHHHHhCCC--------
Confidence 433221 234467999999999999999999999999999999999999999763211 11111111100
Q ss_pred hhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHH-HHHHH
Q 007680 503 ANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMT-DAAAK 546 (593)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~-evl~~ 546 (593)
. .+..++.++.+++.+||..||++||++. |+++|
T Consensus 236 --------~--~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~h 270 (345)
T 1xjd_A 236 --------F--YPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQH 270 (345)
T ss_dssp --------C--CCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGS
T ss_pred --------C--CCcccCHHHHHHHHHHhcCCHhHcCCChHHHHcC
Confidence 0 0112356789999999999999999997 77654
No 82
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.8e-42 Score=343.85 Aligned_cols=257 Identities=25% Similarity=0.345 Sum_probs=213.3
Q ss_pred hhccccccccCccCcccEEEEEeCCCCeEEEEEeehhhHHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEEEecc
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVLEFM 350 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 350 (593)
.++|++.+.||+|+||.||+|.+.+++.||+|+++.... ..+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFM 85 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCC
T ss_pred hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCC
Confidence 468999999999999999999998889999999986532 2357899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCCCCCcc
Q 007680 351 PNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSV 430 (593)
Q Consensus 351 ~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~ 430 (593)
++++|.+++......+++..+..++.|++.||+|||+++ ++||||||+||+++.++.+||+|||.+....... ..
T Consensus 86 ~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~----i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~-~~ 160 (267)
T 3t9t_A 86 EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC----VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ-YT 160 (267)
T ss_dssp TTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT----CCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHH-HH
T ss_pred CCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCC----cccCCCchheEEECCCCCEEEccccccccccccc-cc
Confidence 999999999887667999999999999999999999655 9999999999999999999999999988654321 11
Q ss_pred ccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccchHHHHHHHhcCCchhhhhhhhhhhhh
Q 007680 431 RQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLVREE 509 (593)
Q Consensus 431 ~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 509 (593)
......++..|+|||++.+..++.++||||||+++|+|++ |+.||...... .....+......
T Consensus 161 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~~i~~~~~~-------------- 224 (267)
T 3t9t_A 161 SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS--EVVEDISTGFRL-------------- 224 (267)
T ss_dssp STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHHHTTCCC--------------
T ss_pred ccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHH--HHHHHHhcCCcC--------------
Confidence 1233457788999999988889999999999999999999 89999763211 111111111100
Q ss_pred hhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhh
Q 007680 510 QAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKV 552 (593)
Q Consensus 510 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 552 (593)
..+..++..+.+++.+||+.||++|||+.|++++|+++.+
T Consensus 225 ---~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 225 ---YKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp ---CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---CCCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 0011234578999999999999999999999999999865
No 83
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=5.8e-42 Score=352.01 Aligned_cols=263 Identities=23% Similarity=0.409 Sum_probs=215.8
Q ss_pred hhhccccccccCccCcccEEEEEeC--------CCCeEEEEEeehhh-HHHHHHHHHHHHHHhhc-CCCCcceeeeeeec
Q 007680 270 ATDEFNECNLLGTSSFGSVYKGTIS--------DGTDVAIKVFNLQL-ERAFRSFDSECEVLRNV-RHRNLIKILSSYSN 339 (593)
Q Consensus 270 ~~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 339 (593)
..++|++.+.||+|+||.||+|++. +++.||+|+++... ....+.+.+|+++++++ +||||+++++++..
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 112 (334)
T 2pvf_A 33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 112 (334)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred CHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence 3578999999999999999999863 46789999997653 34567789999999999 89999999999999
Q ss_pred CCceEEEEeccCCCCHHHHHhhCCC---------------CCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCe
Q 007680 340 PDFKALVLEFMPNGSLEKWLYSHNY---------------FLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNI 404 (593)
Q Consensus 340 ~~~~~lv~e~~~~gsL~~~l~~~~~---------------~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NI 404 (593)
.+..++||||+++|+|.+++..... .+++.++..++.|++.||+|||+++ |+||||||+||
T Consensus 113 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~----ivH~Dlkp~NI 188 (334)
T 2pvf_A 113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK----CIHRDLAARNV 188 (334)
T ss_dssp SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTT----EECSCCSGGGE
T ss_pred CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC----eeCCCCccceE
Confidence 9999999999999999999986542 3889999999999999999999654 99999999999
Q ss_pred eeCCCCcEEEEeeccceecCCCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccc
Q 007680 405 LLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEM 483 (593)
Q Consensus 405 ll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~ellt-g~~pf~~~~~~~~ 483 (593)
+++.++.+||+|||++................+++.|+|||++.+..++.++||||||+++|||++ |+.||......
T Consensus 189 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-- 266 (334)
T 2pvf_A 189 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE-- 266 (334)
T ss_dssp EECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--
T ss_pred EEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHH--
Confidence 999999999999999987765443333344457889999999988889999999999999999999 99999763211
Q ss_pred hHHHHHHHhcCCchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhhhc
Q 007680 484 SLRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVKFL 555 (593)
Q Consensus 484 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~ 555 (593)
.....+..... ...+..++.++.+++.+||+.||++|||+.|++++|+++.....
T Consensus 267 ~~~~~~~~~~~-----------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~ 321 (334)
T 2pvf_A 267 ELFKLLKEGHR-----------------MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 321 (334)
T ss_dssp HHHHHHHHTCC-----------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHhcCCC-----------------CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccc
Confidence 11111111110 01112345678999999999999999999999999999977653
No 84
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.6e-41 Score=348.88 Aligned_cols=274 Identities=24% Similarity=0.345 Sum_probs=207.6
Q ss_pred HHHhhhccccccccCccCcccEEEEEeCCCCeEEEEEeehhhHHHHHHHHHHHHHHhhc--CCCCcceeeeeeecC----
Q 007680 267 IQRATDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNV--RHRNLIKILSSYSNP---- 340 (593)
Q Consensus 267 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~l~~~~~~~---- 340 (593)
.....++|++.+.||+|+||.||+|++. ++.||||++..... ..+..|.+++... +||||+++++++...
T Consensus 32 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~---~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~ 107 (337)
T 3mdy_A 32 QRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTEE---ASWFRETEIYQTVLMRHENILGFIAADIKGTGSW 107 (337)
T ss_dssp HTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGG
T ss_pred ccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecccc---chhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCC
Confidence 3445679999999999999999999985 89999999975532 3344555555554 899999999999877
Q ss_pred CceEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcC----CCCCeEecCCCCCCeeeCCCCcEEEEe
Q 007680 341 DFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGH----SSVHIIHCDLKPTNILLDENMVAHVSD 416 (593)
Q Consensus 341 ~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~----~~~~ivH~Dlkp~NIll~~~~~~kL~D 416 (593)
...++||||+++|+|.+++.... +++..+..++.|++.||+|||++. ...+|+||||||+||+++.++.+||+|
T Consensus 108 ~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~D 185 (337)
T 3mdy_A 108 TQLYLITDYHENGSLYDYLKSTT--LDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIAD 185 (337)
T ss_dssp CEEEEEECCCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECC
T ss_pred CceEEEEeccCCCcHHHHhhccC--CCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEe
Confidence 68899999999999999997764 899999999999999999999650 012699999999999999999999999
Q ss_pred eccceecCCCCCcc--ccccccCCccccCccccCCCCCCcc------chHHHHHHHHHHHHhC----------CCCCCcc
Q 007680 417 FGIYKLLGEGEDSV--RQTMTMATIGYMAPEYGLEGIVSAK------CDVYSYGVLLMETFTR----------KRPTDEM 478 (593)
Q Consensus 417 fg~a~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~s~~------~DvwSlGvvl~elltg----------~~pf~~~ 478 (593)
||++..+....... ......||+.|+|||++.+..++.+ +|||||||++|||+|| +.||...
T Consensus 186 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~ 265 (337)
T 3mdy_A 186 LGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDL 265 (337)
T ss_dssp CTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTT
T ss_pred CCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhh
Confidence 99998765433221 1224579999999999887776665 9999999999999999 6666554
Q ss_pred ccccchHHHHHHHhcCCchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhhh
Q 007680 479 FIGEMSLRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVKF 554 (593)
Q Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 554 (593)
.................. ............+++.++.+++.+||+.||++|||+.|++++|+++....
T Consensus 266 ~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 333 (337)
T 3mdy_A 266 VPSDPSYEDMREIVCIKK--------LRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQ 333 (337)
T ss_dssp SCSSCCHHHHHHHHTTSC--------CCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred cCCCCchhhhHHHHhhhc--------cCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhc
Confidence 333222222211111000 00011111122356788999999999999999999999999999987654
No 85
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=6.5e-43 Score=367.54 Aligned_cols=260 Identities=18% Similarity=0.264 Sum_probs=210.3
Q ss_pred HHHHHHhhhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhhH---HHHHHHHHHHHHHhhcCCCCcceeeeeeec
Q 007680 264 YLDIQRATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLE---RAFRSFDSECEVLRNVRHRNLIKILSSYSN 339 (593)
Q Consensus 264 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 339 (593)
..++....++|++.+.||+|+||.||+|+.+ +++.||+|+++.... ...+.+.+|+.+++.++||||+++++++.+
T Consensus 61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 140 (410)
T 3v8s_A 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 140 (410)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence 3445556789999999999999999999976 689999999986432 223457899999999999999999999999
Q ss_pred CCceEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeecc
Q 007680 340 PDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGI 419 (593)
Q Consensus 340 ~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 419 (593)
.+..++||||+++|+|.+++.... +++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+
T Consensus 141 ~~~~~lV~E~~~gg~L~~~l~~~~--~~e~~~~~~~~qi~~aL~~LH~~g----ivHrDLKp~NILl~~~g~ikL~DFG~ 214 (410)
T 3v8s_A 141 DRYLYMVMEYMPGGDLVNLMSNYD--VPEKWARFYTAEVVLALDAIHSMG----FIHRDVKPDNMLLDKSGHLKLADFGT 214 (410)
T ss_dssp SSEEEEEECCCTTEEHHHHHHHCC--CCHHHHHHHHHHHHHHHHHHHHTT----EECCCCSGGGEEECTTSCEEECCCTT
T ss_pred CCEEEEEEeCCCCCcHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCC----eEeccCCHHHeeECCCCCEEEeccce
Confidence 999999999999999999998754 899999999999999999999654 99999999999999999999999999
Q ss_pred ceecCCCCCccccccccCCccccCccccCCCC----CCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCC
Q 007680 420 YKLLGEGEDSVRQTMTMATIGYMAPEYGLEGI----VSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPH 495 (593)
Q Consensus 420 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 495 (593)
++....... .......||+.|+|||++.+.. ++.++|||||||++|||++|+.||......+ .+.....
T Consensus 215 a~~~~~~~~-~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~-~~~~i~~----- 287 (410)
T 3v8s_A 215 CMKMNKEGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG-TYSKIMN----- 287 (410)
T ss_dssp CEECCTTSE-EECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHT-----
T ss_pred eEeeccCCc-ccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhh-HHHHHHh-----
Confidence 987654332 2234567999999999987655 8899999999999999999999997632111 1111110
Q ss_pred chhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCC--CCCHHHHHHH
Q 007680 496 GLTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDM--RINMTDAAAK 546 (593)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~ 546 (593)
.. .....+....++.++.+++.+||..+|.+ ||+++|+++|
T Consensus 288 -------~~---~~~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 288 -------HK---NSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp -------HH---HHCCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred -------cc---ccccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 00 00011111234568899999999999988 9999999987
No 86
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=9.6e-43 Score=356.46 Aligned_cols=259 Identities=22% Similarity=0.383 Sum_probs=207.1
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCe----EEEEEeehhh-HHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceE
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTD----VAIKVFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKA 344 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~----vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 344 (593)
.++|++.+.||+|+||.||+|++. +++. ||+|.+.... ......+.+|+.++++++||||+++++++. .+..+
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~ 90 (325)
T 3kex_A 12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQ 90 (325)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEE
T ss_pred HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccE
Confidence 457999999999999999999965 4554 7777775432 223356778999999999999999999886 45689
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecC
Q 007680 345 LVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424 (593)
Q Consensus 345 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~ 424 (593)
+||||+++|+|.+++......+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++...
T Consensus 91 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~----ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~ 166 (325)
T 3kex_A 91 LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG----MVHRNLAARNVLLKSPSQVQVADFGVADLLP 166 (325)
T ss_dssp EEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTT----CCCSCCSSTTEEESSSSCEEECSCSGGGGSC
T ss_pred EEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCC----CCCCccchheEEECCCCeEEECCCCcccccC
Confidence 999999999999999887666999999999999999999999655 9999999999999999999999999999876
Q ss_pred CCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccchHHHHHHHhcCCchhhhhhh
Q 007680 425 EGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDA 503 (593)
Q Consensus 425 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 503 (593)
............++..|+|||++.+..++.++|||||||++|||+| |+.||...... .....+....
T Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~~~~---------- 234 (325)
T 3kex_A 167 PDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA--EVPDLLEKGE---------- 234 (325)
T ss_dssp CCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTT--HHHHHHHTTC----------
T ss_pred cccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHH--HHHHHHHcCC----------
Confidence 5544434455568889999999998999999999999999999999 99999764222 1111111110
Q ss_pred hhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhh
Q 007680 504 NLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVK 553 (593)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 553 (593)
....+..++.++.+++.+||+.||++|||+.|++++|+.+...
T Consensus 235 -------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~ 277 (325)
T 3kex_A 235 -------RLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARD 277 (325)
T ss_dssp -------BCCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred -------CCCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 0011112345678999999999999999999999999998654
No 87
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.4e-42 Score=365.20 Aligned_cols=261 Identities=22% Similarity=0.309 Sum_probs=210.2
Q ss_pred HHHHHHhhhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhh---HHHHHHHHHHHHHHhhcCCCCcceeeeeeec
Q 007680 264 YLDIQRATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSYSN 339 (593)
Q Consensus 264 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 339 (593)
+.+.....++|++.+.||+|+||.||+|+.+ +|+.||+|++++.. ....+.+.+|..++..++||||+++++++.+
T Consensus 53 ~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 132 (412)
T 2vd5_A 53 LKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQD 132 (412)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEee
Confidence 4445556789999999999999999999975 79999999998643 2234458899999999999999999999999
Q ss_pred CCceEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeecc
Q 007680 340 PDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGI 419 (593)
Q Consensus 340 ~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 419 (593)
.+..|+||||+++|+|.+++.+.+..+++..+..++.||+.||+|||+++ |+||||||+||+++.++.+||+|||+
T Consensus 133 ~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~g----iiHrDLKp~NILld~~g~vkL~DFGl 208 (412)
T 2vd5_A 133 ENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLG----YVHRDIKPDNILLDRCGHIRLADFGS 208 (412)
T ss_dssp SSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTT----EECCCCSGGGEEECTTSCEEECCCTT
T ss_pred CCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC----eeecccCHHHeeecCCCCEEEeechh
Confidence 99999999999999999999876556999999999999999999999654 99999999999999999999999999
Q ss_pred ceecCCCCCccccccccCCccccCccccC-------CCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHh
Q 007680 420 YKLLGEGEDSVRQTMTMATIGYMAPEYGL-------EGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKES 492 (593)
Q Consensus 420 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~ 492 (593)
++....... .......||+.|+|||++. +..++.++|||||||++|||++|+.||......+ .+......
T Consensus 209 a~~~~~~~~-~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~-~~~~i~~~- 285 (412)
T 2vd5_A 209 CLKLRADGT-VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAE-TYGKIVHY- 285 (412)
T ss_dssp CEECCTTSC-EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHTH-
T ss_pred heeccCCCc-cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHH-HHHHHHhc-
Confidence 987654332 1233457999999999886 4578999999999999999999999997632111 11111100
Q ss_pred cCCchhhhhhhhhhhhhhhhh-hhHHHHHHHHHHHhhcccCCCCCC---CCHHHHHHH
Q 007680 493 LPHGLTEVVDANLVREEQAFS-AKMDCILSIMDFALDCCMESPDMR---INMTDAAAK 546 (593)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~R---Ps~~evl~~ 546 (593)
. .....+ ....++.++.+++.+||. +|++| |+++|+++|
T Consensus 286 -----------~---~~~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 286 -----------K---EHLSLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp -----------H---HHCCCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred -----------c---cCcCCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 0 000000 012346688999999999 99998 589999876
No 88
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=5.3e-43 Score=359.45 Aligned_cols=266 Identities=21% Similarity=0.341 Sum_probs=215.9
Q ss_pred HHHhhhccccccccCccCcccEEEEEeC-CC-----CeEEEEEeehhh-HHHHHHHHHHHHHHhhc-CCCCcceeeeeee
Q 007680 267 IQRATDEFNECNLLGTSSFGSVYKGTIS-DG-----TDVAIKVFNLQL-ERAFRSFDSECEVLRNV-RHRNLIKILSSYS 338 (593)
Q Consensus 267 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~-----~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 338 (593)
+....++|++.+.||+|+||.||+|... ++ ..||+|.++... ....+.+.+|+.+++++ +||||+++++++.
T Consensus 41 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 120 (333)
T 2i1m_A 41 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACT 120 (333)
T ss_dssp GBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred ccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence 4445678999999999999999999964 23 479999997653 34456789999999999 8999999999999
Q ss_pred cCCceEEEEeccCCCCHHHHHhhC-------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCee
Q 007680 339 NPDFKALVLEFMPNGSLEKWLYSH-------------NYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNIL 405 (593)
Q Consensus 339 ~~~~~~lv~e~~~~gsL~~~l~~~-------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIl 405 (593)
+.+..++||||+++|+|.+++... ...+++..+..++.|++.||+|||+++ |+||||||+||+
T Consensus 121 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~----ivH~Dlkp~NIl 196 (333)
T 2i1m_A 121 HGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN----CIHRDVAARNVL 196 (333)
T ss_dssp SSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTT----EECSCCSGGGCE
T ss_pred cCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCC----cccCCcccceEE
Confidence 999999999999999999998753 224799999999999999999999654 999999999999
Q ss_pred eCCCCcEEEEeeccceecCCCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccch
Q 007680 406 LDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMS 484 (593)
Q Consensus 406 l~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~ellt-g~~pf~~~~~~~~~ 484 (593)
++.++.+||+|||++................+|+.|+|||++.+..++.++||||||+++|||+| |..||....... .
T Consensus 197 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~-~ 275 (333)
T 2i1m_A 197 LTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS-K 275 (333)
T ss_dssp EEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH-H
T ss_pred ECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH-H
Confidence 99999999999999987654443333344557889999999988899999999999999999999 999997643221 1
Q ss_pred HHHHHHHhcCCchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhhh
Q 007680 485 LRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVKF 554 (593)
Q Consensus 485 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 554 (593)
........... ..+..++..+.+++.+||+.||++|||+.|++++|+++....
T Consensus 276 ~~~~~~~~~~~-----------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~ 328 (333)
T 2i1m_A 276 FYKLVKDGYQM-----------------AQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQED 328 (333)
T ss_dssp HHHHHHHTCCC-----------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCC-----------------CCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHhh
Confidence 12222211110 011123557899999999999999999999999999987654
No 89
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=2.5e-42 Score=356.45 Aligned_cols=246 Identities=22% Similarity=0.250 Sum_probs=206.7
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhh---HHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEE
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALV 346 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 346 (593)
.++|++.+.||+|+||.||+|+.. +|+.||+|+++... ....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 119 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 468999999999999999999976 79999999998653 23456788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCCC
Q 007680 347 LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEG 426 (593)
Q Consensus 347 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~ 426 (593)
|||+++|+|.+++...+. +++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++.....
T Consensus 120 ~e~~~gg~L~~~l~~~~~-~~~~~~~~~~~qi~~aL~~LH~~~----ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~ 194 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRRIGR-FSEPHARFYAAQIVLTFEYLHSLD----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 194 (350)
T ss_dssp EECCTTCBHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHHTT----EECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred EcCCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCC----cccccCccceEEECCCCCEEEcccccceeccCC
Confidence 999999999999987654 999999999999999999999655 999999999999999999999999999876432
Q ss_pred CCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhhhhhh
Q 007680 427 EDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLV 506 (593)
Q Consensus 427 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (593)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+.... .
T Consensus 195 -----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~~~~~i~~~~-----------~- 255 (350)
T 1rdq_E 195 -----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP--IQIYEKIVSGK-----------V- 255 (350)
T ss_dssp -----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHCC-----------C-
T ss_pred -----cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCH--HHHHHHHHcCC-----------C-
Confidence 2335689999999999999999999999999999999999999976321 11111111100 0
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCC-----HHHHHHH
Q 007680 507 REEQAFSAKMDCILSIMDFALDCCMESPDMRIN-----MTDAAAK 546 (593)
Q Consensus 507 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~ 546 (593)
..+..++.++.+++.+||+.||++||+ ++|+++|
T Consensus 256 ------~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h 294 (350)
T 1rdq_E 256 ------RFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp ------CCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred ------CCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence 011224567899999999999999998 8888875
No 90
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=4e-42 Score=344.29 Aligned_cols=259 Identities=20% Similarity=0.340 Sum_probs=201.2
Q ss_pred hhhccccccccCccCcccEEEEEeCC----CCeEEEEEeehhh-HHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceE
Q 007680 270 ATDEFNECNLLGTSSFGSVYKGTISD----GTDVAIKVFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKA 344 (593)
Q Consensus 270 ~~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 344 (593)
..++|++.+.||+|+||.||+|.+.. +..||+|+++... ....+.+.+|+.++++++||||+++++++. .+..+
T Consensus 13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~ 91 (281)
T 1mp8_A 13 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVW 91 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCE
T ss_pred ehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccE
Confidence 45789999999999999999998642 4569999987542 345567899999999999999999999984 46789
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecC
Q 007680 345 LVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424 (593)
Q Consensus 345 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~ 424 (593)
+||||+++++|.+++......+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++...
T Consensus 92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~----i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 167 (281)
T 1mp8_A 92 IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR----FVHRDIAARNVLVSSNDCVKLGDFGLSRYME 167 (281)
T ss_dssp EEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTT----CCCSCCSGGGEEEEETTEEEECC--------
T ss_pred EEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC----eecccccHHHEEECCCCCEEECccccccccC
Confidence 999999999999999887667999999999999999999999654 9999999999999999999999999998765
Q ss_pred CCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccchHHHHHHHhcCCchhhhhhh
Q 007680 425 EGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDA 503 (593)
Q Consensus 425 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 503 (593)
.... .......+++.|+|||++.+..++.++||||||+++|||++ |..||...... .....+.....
T Consensus 168 ~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~--~~~~~i~~~~~--------- 235 (281)
T 1mp8_A 168 DSTY-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN--DVIGRIENGER--------- 235 (281)
T ss_dssp ------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHHHHHTTCC---------
T ss_pred cccc-cccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHH--HHHHHHHcCCC---------
Confidence 4322 12233456788999999988899999999999999999997 99999764322 11111111100
Q ss_pred hhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhh
Q 007680 504 NLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVK 553 (593)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 553 (593)
.+.+..+++.+.+++.+||+.||++|||+.|++++|+++...
T Consensus 236 --------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 277 (281)
T 1mp8_A 236 --------LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 277 (281)
T ss_dssp --------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred --------CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 011123466889999999999999999999999999998654
No 91
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=1.3e-42 Score=355.81 Aligned_cols=276 Identities=25% Similarity=0.317 Sum_probs=215.2
Q ss_pred hhccccccccCccCcccEEEEEe-----CCCCeEEEEEeehhhHHHHHHHHHHHHHHhhcCCCCcceeeeeee--cCCce
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTI-----SDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYS--NPDFK 343 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~ 343 (593)
.++|++.+.||+|+||.||+|++ .+++.||+|++........+.+.+|++++++++||||+++++++. +.+..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 101 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSL 101 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEE
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceE
Confidence 46899999999999999999984 368899999998776666778999999999999999999999886 45568
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceec
Q 007680 344 ALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLL 423 (593)
Q Consensus 344 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~ 423 (593)
++||||+++++|.+++......+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++...
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~----ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~ 177 (327)
T 3lxl_A 102 RLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR----CVHRDLAARNILVESEAHVKIADFGLAKLL 177 (327)
T ss_dssp EEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTT----EECSCCSGGGEEEEETTEEEECCGGGCEEC
T ss_pred EEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC----ccCCCCChhhEEECCCCCEEEcccccceec
Confidence 9999999999999999876556999999999999999999999654 999999999999999999999999999987
Q ss_pred CCCCCcc-ccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhh
Q 007680 424 GEGEDSV-RQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVD 502 (593)
Q Consensus 424 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 502 (593)
....... ......+|..|+|||++.+..++.++||||||+++|+|++|..||......... .+.............+
T Consensus 178 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~ 255 (327)
T 3lxl_A 178 PLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLR--MMGCERDVPALSRLLE 255 (327)
T ss_dssp CTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHH--HCC----CCHHHHHHH
T ss_pred ccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhh--hcccccccccHHHHHH
Confidence 5443321 223446888899999998888999999999999999999999998663211100 0000000000111111
Q ss_pred hhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhhh
Q 007680 503 ANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVKF 554 (593)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 554 (593)
.. ........+..+++.+.+++.+||+.||++|||+.|++++|+.+....
T Consensus 256 ~~--~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 305 (327)
T 3lxl_A 256 LL--EEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGS 305 (327)
T ss_dssp HH--HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC----
T ss_pred Hh--hcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence 00 011111222345678999999999999999999999999999987655
No 92
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.7e-42 Score=357.26 Aligned_cols=252 Identities=23% Similarity=0.330 Sum_probs=198.0
Q ss_pred hhccccccccCccCcccEEEEEeCCCCeEEEEEeehh--hHHHHHHHHHHHHHHhhcCC--CCcceeeeeeecCCceEEE
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQ--LERAFRSFDSECEVLRNVRH--RNLIKILSSYSNPDFKALV 346 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lv 346 (593)
.++|++.+.||+|+||.||++...+++.||||++... .....+.+.+|+.++.+++| |||+++++++...+..++|
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 4679999999999999999999888999999999754 23455788999999999976 9999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCCC
Q 007680 347 LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEG 426 (593)
Q Consensus 347 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~ 426 (593)
||+ .+++|.+++..... +++.++..++.|++.||+|||+++ |+||||||+||+++ ++.+||+|||+++.....
T Consensus 88 ~e~-~~~~L~~~l~~~~~-~~~~~~~~i~~qi~~al~~lH~~~----iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~ 160 (343)
T 3dbq_A 88 MEC-GNIDLNSWLKKKKS-IDPWERKSYWKNMLEAVHTIHQHG----IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPD 160 (343)
T ss_dssp ECC-CSEEHHHHHHHSCC-CCHHHHHHHHHHHHHHHHHHHHTT----CCCCCCCGGGEEEE-TTEEEECCCSSSCCC---
T ss_pred EeC-CCCCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhCC----eecCCCCcceEEEE-CCcEEEeecccccccCcc
Confidence 995 58899999988654 899999999999999999999655 99999999999997 578999999999877554
Q ss_pred CCccccccccCCccccCccccCC-----------CCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCC
Q 007680 427 EDSVRQTMTMATIGYMAPEYGLE-----------GIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPH 495 (593)
Q Consensus 427 ~~~~~~~~~~gt~~y~aPE~~~~-----------~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 495 (593)
..........||+.|+|||++.+ ..++.++|||||||++|||++|+.||..............
T Consensus 161 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~------ 234 (343)
T 3dbq_A 161 TTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII------ 234 (343)
T ss_dssp ---------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHH------
T ss_pred cccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHh------
Confidence 43333345679999999998754 6789999999999999999999999976322211111111
Q ss_pred chhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 496 GLTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
+.... ...+...+.++.+++.+||+.||++|||+.|+++|
T Consensus 235 ------~~~~~-----~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 235 ------DPNHE-----IEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp ------CTTSC-----CCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ------cCCcc-----cCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 10000 00011123468999999999999999999999987
No 93
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=1.2e-42 Score=353.97 Aligned_cols=270 Identities=26% Similarity=0.398 Sum_probs=218.6
Q ss_pred CHHHHHHhhhccccccccCccCcccEEEEEe------CCCCeEEEEEeehhh-HHHHHHHHHHHHHHhhc-CCCCcceee
Q 007680 263 SYLDIQRATDEFNECNLLGTSSFGSVYKGTI------SDGTDVAIKVFNLQL-ERAFRSFDSECEVLRNV-RHRNLIKIL 334 (593)
Q Consensus 263 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~ 334 (593)
...+.....++|++.+.||+|+||.||+|++ .+++.||+|+++... ....+.+.+|+.++.++ +||||++++
T Consensus 18 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 97 (316)
T 2xir_A 18 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 97 (316)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred cccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEE
Confidence 3445555678999999999999999999984 256889999997653 33456789999999999 799999999
Q ss_pred eeeecCC-ceEEEEeccCCCCHHHHHhhCCC---------------CCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecC
Q 007680 335 SSYSNPD-FKALVLEFMPNGSLEKWLYSHNY---------------FLDILERLNIMIDVGSALEYLHNGHSSVHIIHCD 398 (593)
Q Consensus 335 ~~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~---------------~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~D 398 (593)
+++...+ ..++||||+++++|.+++..... .+++..+..++.|++.||+|||+++ |+|||
T Consensus 98 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~----i~H~d 173 (316)
T 2xir_A 98 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK----CIHRD 173 (316)
T ss_dssp EEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTT----CCCSC
T ss_pred EEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCC----ccccc
Confidence 9987755 58999999999999999987653 2789999999999999999999654 99999
Q ss_pred CCCCCeeeCCCCcEEEEeeccceecCCCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHh-CCCCCCc
Q 007680 399 LKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT-RKRPTDE 477 (593)
Q Consensus 399 lkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~ellt-g~~pf~~ 477 (593)
|||+||+++.++.+||+|||+++...............+|+.|+|||++.+..++.++||||||+++|||+| |+.||..
T Consensus 174 ikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~ 253 (316)
T 2xir_A 174 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253 (316)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred CccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcc
Confidence 999999999999999999999987755444333444567889999999988999999999999999999998 9999976
Q ss_pred cccccchHHHHHHHhcCCchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhhh
Q 007680 478 MFIGEMSLRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVKF 554 (593)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 554 (593)
...... .......... ...+..+++++.+++.+||+.||++|||+.|++++|+.+....
T Consensus 254 ~~~~~~-~~~~~~~~~~-----------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 312 (316)
T 2xir_A 254 VKIDEE-FCRRLKEGTR-----------------MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 312 (316)
T ss_dssp CCCSHH-HHHHHHHTCC-----------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred cchhHH-HHHHhccCcc-----------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence 432221 1111111110 0011123567899999999999999999999999999987654
No 94
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=4.1e-42 Score=349.56 Aligned_cols=246 Identities=20% Similarity=0.226 Sum_probs=196.2
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhh--HHHHHHHHHHHHHHhhc-CCCCcceeeeeeecCCceEEE
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQL--ERAFRSFDSECEVLRNV-RHRNLIKILSSYSNPDFKALV 346 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 346 (593)
.++|++.++||+|+||+||+|++. +|+.||||++.... .........|+..+.++ +||||+++++++.+++..++|
T Consensus 56 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv 135 (311)
T 3p1a_A 56 QQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQ 135 (311)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEE
Confidence 468999999999999999999976 79999999986532 23334455566666555 899999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCCC
Q 007680 347 LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEG 426 (593)
Q Consensus 347 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~ 426 (593)
|||+ +++|.+++...+..+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++......
T Consensus 136 ~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~----ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~ 210 (311)
T 3p1a_A 136 TELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQG----LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTA 210 (311)
T ss_dssp EECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTT----EECCCCSGGGEEECGGGCEEECCCTTCEECC--
T ss_pred Eecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC----EecCCCCHHHEEECCCCCEEEccceeeeecccC
Confidence 9999 77999999887767999999999999999999999654 999999999999999999999999999876543
Q ss_pred CCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhhhhhh
Q 007680 427 EDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLV 506 (593)
Q Consensus 427 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (593)
. ......||+.|+|||++.+ .++.++|||||||++|||++|..|+.... .... + .....
T Consensus 211 ~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~----~~~~-~-----------~~~~~- 269 (311)
T 3p1a_A 211 G---AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGE----GWQQ-L-----------RQGYL- 269 (311)
T ss_dssp -------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHH----HHHH-H-----------TTTCC-
T ss_pred C---CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcc----HHHH-H-----------hccCC-
Confidence 2 2234568999999998875 79999999999999999999977664411 0000 0 00000
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 507 REEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 507 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
.......+++++.+++.+||+.||++|||+.|++++
T Consensus 270 ----~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 305 (311)
T 3p1a_A 270 ----PPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLAL 305 (311)
T ss_dssp ----CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred ----CcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence 001122346688999999999999999999999874
No 95
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=3.1e-42 Score=355.24 Aligned_cols=258 Identities=20% Similarity=0.250 Sum_probs=204.9
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhh---HHHHHHHHHHHHHHhhc-CCCCcceeeeeeecCCceEE
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQL---ERAFRSFDSECEVLRNV-RHRNLIKILSSYSNPDFKAL 345 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 345 (593)
.++|++.+.||+|+||.||+|+.+ +++.||+|+++... ....+.+.+|..++.++ +||||+++++++.+.+..++
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 87 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 87 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence 468999999999999999999976 68999999998652 34456788999999988 89999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCC
Q 007680 346 VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGE 425 (593)
Q Consensus 346 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~ 425 (593)
||||+++|+|.+++...+. +++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++....
T Consensus 88 v~e~~~gg~L~~~l~~~~~-l~~~~~~~~~~qi~~aL~~LH~~~----ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~ 162 (345)
T 3a8x_A 88 VIEYVNGGDLMFHMQRQRK-LPEEHARFYSAEISLALNYLHERG----IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 162 (345)
T ss_dssp EECCCCSCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHTT----CBCCCCCGGGEEECTTSCEEECCGGGCBCSCC
T ss_pred EEeCCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCC----ceecCCCHHHEEECCCCCEEEEeccccccccC
Confidence 9999999999999987654 999999999999999999999654 99999999999999999999999999986432
Q ss_pred CCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhhhhh
Q 007680 426 GEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANL 505 (593)
Q Consensus 426 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 505 (593)
... ......||+.|+|||++.+..++.++|||||||++|||++|+.||........... .....+...+
T Consensus 163 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~---------~~~~~~~~~i 231 (345)
T 3a8x_A 163 PGD--TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ---------NTEDYLFQVI 231 (345)
T ss_dssp TTC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC----------------CHHHHHHHH
T ss_pred CCC--cccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCccccccccc---------ccHHHHHHHH
Confidence 221 23445799999999999999999999999999999999999999965321110000 0000000000
Q ss_pred hhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCH------HHHHHH
Q 007680 506 VREEQAFSAKMDCILSIMDFALDCCMESPDMRINM------TDAAAK 546 (593)
Q Consensus 506 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~------~evl~~ 546 (593)
..... ..+..++.++.+++.+||+.||++||++ .|+++|
T Consensus 232 ~~~~~--~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~h 276 (345)
T 3a8x_A 232 LEKQI--RIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 276 (345)
T ss_dssp HHCCC--CCCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTS
T ss_pred HcCCC--CCCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcC
Confidence 00000 0112345678999999999999999996 677665
No 96
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=5.1e-42 Score=342.60 Aligned_cols=252 Identities=21% Similarity=0.259 Sum_probs=207.7
Q ss_pred hhhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhhHHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEEEe
Q 007680 270 ATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVLE 348 (593)
Q Consensus 270 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 348 (593)
..++|++.+.||+|+||.||+|... ++..||+|++........+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (277)
T 3f3z_A 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVME 86 (277)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEe
Confidence 3578999999999999999999976 578899999987665566789999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeee---CCCCcEEEEeeccceecCC
Q 007680 349 FMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILL---DENMVAHVSDFGIYKLLGE 425 (593)
Q Consensus 349 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll---~~~~~~kL~Dfg~a~~~~~ 425 (593)
|+++++|.+++..... +++.++..++.|++.||+|||+++ |+||||||+||++ +.++.+||+|||.+.....
T Consensus 87 ~~~~~~L~~~~~~~~~-~~~~~~~~i~~~i~~~l~~lH~~~----i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~ 161 (277)
T 3f3z_A 87 LCTGGELFERVVHKRV-FRESDAARIMKDVLSAVAYCHKLN----VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKP 161 (277)
T ss_dssp CCCSCBHHHHHHHHCS-CCHHHHHHHHHHHHHHHHHHHHTT----EECCCCSGGGEEESSSSTTCCEEECCCTTCEECCT
T ss_pred ccCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCC----ccCCCCCHHHEEEecCCCCCcEEEEecccceeccC
Confidence 9999999999877654 899999999999999999999655 9999999999999 7889999999999987654
Q ss_pred CCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhhhhh
Q 007680 426 GEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANL 505 (593)
Q Consensus 426 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 505 (593)
.. ......+|+.|+|||++.+. ++.++||||||+++|||++|+.||...... .....+.......
T Consensus 162 ~~---~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~--------- 226 (277)
T 3f3z_A 162 GK---MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDS--EVMLKIREGTFTF--------- 226 (277)
T ss_dssp TS---CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHCCCCC---------
T ss_pred cc---chhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHH--HHHHHHHhCCCCC---------
Confidence 33 22345689999999987654 999999999999999999999999763221 1111111110000
Q ss_pred hhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 506 VREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 506 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
.......+++.+.+++.+||+.||++|||+.|+++|
T Consensus 227 -----~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 262 (277)
T 3f3z_A 227 -----PEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEH 262 (277)
T ss_dssp -----CHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred -----CchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000111345688999999999999999999999875
No 97
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=3.3e-42 Score=351.16 Aligned_cols=269 Identities=24% Similarity=0.345 Sum_probs=192.0
Q ss_pred hhhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhh-HHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEEE
Q 007680 270 ATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVL 347 (593)
Q Consensus 270 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 347 (593)
..++|++.+.||+|+||.||+|... +|+.||+|+++... ....+.+.+|++++++++||||+++++++..++..++||
T Consensus 3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 82 (317)
T 2pmi_A 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVF 82 (317)
T ss_dssp ----------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEE
T ss_pred cccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEE
Confidence 3568999999999999999999965 68999999997643 223467889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCC-----CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeecccee
Q 007680 348 EFMPNGSLEKWLYSHN-----YFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKL 422 (593)
Q Consensus 348 e~~~~gsL~~~l~~~~-----~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~ 422 (593)
||++ ++|.+++.... ..+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++..
T Consensus 83 e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~----ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~ 157 (317)
T 2pmi_A 83 EFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK----ILHRDLKPQNLLINKRGQLKLGDFGLARA 157 (317)
T ss_dssp ECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT----EECCCCCGGGEEECTTCCEEECCCSSCEE
T ss_pred EecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCC----eeeCCCChHHeEEcCCCCEEECcCcccee
Confidence 9997 59999987532 24899999999999999999999654 99999999999999999999999999987
Q ss_pred cCCCCCccccccccCCccccCccccCC-CCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHh--cCCc-hh
Q 007680 423 LGEGEDSVRQTMTMATIGYMAPEYGLE-GIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKES--LPHG-LT 498 (593)
Q Consensus 423 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~--~~~~-~~ 498 (593)
...... ......+|+.|+|||++.+ ..++.++|||||||++|||++|+.||......+ ......... .+.. ..
T Consensus 158 ~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~ 234 (317)
T 2pmi_A 158 FGIPVN--TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEE-QLKLIFDIMGTPNESLWP 234 (317)
T ss_dssp TTSCCC--CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCSCCTTTCG
T ss_pred cCCCcc--cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCChhHhh
Confidence 654322 2234568999999999876 468999999999999999999999997643221 111111110 0111 00
Q ss_pred hhhh-----hhhh-------hhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 499 EVVD-----ANLV-------REEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 499 ~~~~-----~~~~-------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
.... ..+. ...........++.++.+++.+||+.||++|||+.|+++|
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 235 SVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp GGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 0000 0000 0000000111345688999999999999999999999876
No 98
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.8e-42 Score=354.58 Aligned_cols=276 Identities=25% Similarity=0.379 Sum_probs=216.0
Q ss_pred hhccccccccCccCcccEEEEEe-----CCCCeEEEEEeehhhHHHHHHHHHHHHHHhhcCCCCcceeeeeeecCC--ce
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTI-----SDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPD--FK 343 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~ 343 (593)
.++|++.+.||+|+||.||+|++ .+++.||+|++........+.+.+|++++++++||||+++++++...+ ..
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 119 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 119 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence 46799999999999999999984 368899999998766666778999999999999999999999887654 78
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceec
Q 007680 344 ALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLL 423 (593)
Q Consensus 344 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~ 423 (593)
++||||+++++|.+++......+++.++..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++...
T Consensus 120 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~----ivH~dikp~NIli~~~~~~kL~Dfg~~~~~ 195 (326)
T 2w1i_A 120 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR----YIHRDLATRNILVENENRVKIGDFGLTKVL 195 (326)
T ss_dssp EEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTT----EECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC----EeccCCCcceEEEcCCCcEEEecCcchhhc
Confidence 9999999999999999987767999999999999999999999654 999999999999999999999999999887
Q ss_pred CCCCCccc-cccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCc-hhhhh
Q 007680 424 GEGEDSVR-QTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHG-LTEVV 501 (593)
Q Consensus 424 ~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~ 501 (593)
........ .....++..|+|||++.+..++.++||||||+++|||+||..||...... +.+......... ....+
T Consensus 196 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 272 (326)
T 2w1i_A 196 PQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE---FMRMIGNDKQGQMIVFHL 272 (326)
T ss_dssp CSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHH---HHHHHCTTCCTHHHHHHH
T ss_pred cccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHH---HHHhhccccchhhhHHHH
Confidence 65432211 22345778899999998888999999999999999999999998652111 111100000000 00000
Q ss_pred hhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhhh
Q 007680 502 DANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVKF 554 (593)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 554 (593)
...+ ......+.+..++.++.+++.+||+.||++|||+.|+++.|++++..+
T Consensus 273 ~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~l 324 (326)
T 2w1i_A 273 IELL-KNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQM 324 (326)
T ss_dssp HHHH-HTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHHh-hcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHh
Confidence 0000 000111122345678999999999999999999999999999998764
No 99
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=3.6e-42 Score=357.25 Aligned_cols=274 Identities=21% Similarity=0.217 Sum_probs=211.1
Q ss_pred ccCCHHHHHHhhhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhhHHHHHHHHHHHHHHhhcC-----CCCccee
Q 007680 260 RRTSYLDIQRATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLERAFRSFDSECEVLRNVR-----HRNLIKI 333 (593)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h~niv~l 333 (593)
..+++.+.....++|++.++||+|+||.||+|++. +++.||||+++... ...+.+..|+.+++.++ ||||+++
T Consensus 23 ~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~h~~iv~~ 101 (360)
T 3llt_A 23 VHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK-KYTRSAKIEADILKKIQNDDINNNNIVKY 101 (360)
T ss_dssp GSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCH-HHHHHHHHHHHHHHHTCCCSTTGGGBCCE
T ss_pred eeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccch-hhhhhhHHHHHHHHHhcccCCCCCCeecc
Confidence 34455556666889999999999999999999974 78999999997532 33456778999999996 9999999
Q ss_pred eeeeecCCceEEEEeccCCCCHHHHHhhCCC-CCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCC----
Q 007680 334 LSSYSNPDFKALVLEFMPNGSLEKWLYSHNY-FLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDE---- 408 (593)
Q Consensus 334 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~-~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~---- 408 (593)
++++...+..++||||+ +++|.+++..... .+++.++..++.|++.||+|||+++ |+||||||+||+++.
T Consensus 102 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~----ivHrDlkp~NIll~~~~~~ 176 (360)
T 3llt_A 102 HGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMS----LTHTDLKPENILLDDPYFE 176 (360)
T ss_dssp EEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT----EECSCCSGGGEEESCTTCC
T ss_pred cceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC----eeeCCCCcccEEEcccccc
Confidence 99999999999999999 8999999987653 5899999999999999999999654 999999999999975
Q ss_pred ---------------------CCcEEEEeeccceecCCCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHH
Q 007680 409 ---------------------NMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLME 467 (593)
Q Consensus 409 ---------------------~~~~kL~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~e 467 (593)
++.+||+|||++....... ....||+.|+|||++.+..++.++|||||||++||
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e 251 (360)
T 3llt_A 177 KSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYH-----GSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAE 251 (360)
T ss_dssp EEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCC-----CSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHH
T ss_pred ccccchhcccccccccccccCCCCEEEEeccCceecCCCC-----cCccCcccccCcHHHcCCCCCCccchHHHHHHHHH
Confidence 7899999999998754322 33568999999999999999999999999999999
Q ss_pred HHhCCCCCCccccccchHHHHHHHhcCCchhhhhhhhhhhhh-----------------h---h--------hhhhHHHH
Q 007680 468 TFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLVREE-----------------Q---A--------FSAKMDCI 519 (593)
Q Consensus 468 lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~---~--------~~~~~~~~ 519 (593)
|++|+.||...... .....+.................... . . ........
T Consensus 252 ll~g~~pf~~~~~~--~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 329 (360)
T 3llt_A 252 LYTGSLLFRTHEHM--EHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKH 329 (360)
T ss_dssp HHHSSCSCCCSSHH--HHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCC
T ss_pred HHHCCCCCCCCcHH--HHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchH
Confidence 99999999764221 12222222111111111000000000 0 0 00001112
Q ss_pred HHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 520 LSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 520 ~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
+.+.+++.+||+.||++|||++|+++|
T Consensus 330 ~~l~~li~~~L~~dP~~Rpta~elL~h 356 (360)
T 3llt_A 330 ELFCDFLYSILQIDPTLRPSPAELLKH 356 (360)
T ss_dssp HHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred HHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 578899999999999999999999865
No 100
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=1.9e-42 Score=344.13 Aligned_cols=254 Identities=24% Similarity=0.342 Sum_probs=206.9
Q ss_pred hhccccccccCccCcccEEEEEeCCCCeEEEEEeehhh--HHHHHHHHHHHHHHhhcCCCCcceeeeeeecC--CceEEE
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSYSNP--DFKALV 346 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv 346 (593)
.++|++.+.||+|+||.||+|++. ++.||+|+++... ....+.+.+|+.++++++||||+++++++.+. +..++|
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI 87 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence 468999999999999999999985 8899999997643 34556799999999999999999999999887 788999
Q ss_pred EeccCCCCHHHHHhhCCC-CCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCC
Q 007680 347 LEFMPNGSLEKWLYSHNY-FLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGE 425 (593)
Q Consensus 347 ~e~~~~gsL~~~l~~~~~-~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~ 425 (593)
|||+++|+|.+++..... .+++.++..++.|++.||+|||+++ ..++||||||+||+++.++.++++|||++.....
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~ 165 (271)
T 3kmu_A 88 THWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLE--PLIPRHALNSRSVMIDEDMTARISMADVKFSFQS 165 (271)
T ss_dssp EECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSS--SCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC
T ss_pred ecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCC--CceecCCCccceEEEcCCcceeEEeccceeeecc
Confidence 999999999999987654 5899999999999999999999432 2299999999999999999999999998654322
Q ss_pred CCCccccccccCCccccCccccCCCCCCc---cchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhh
Q 007680 426 GEDSVRQTMTMATIGYMAPEYGLEGIVSA---KCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVD 502 (593)
Q Consensus 426 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~---~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 502 (593)
....+|+.|+|||++.+..++. ++||||||+++|||++|+.||........ ..........
T Consensus 166 -------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~~~~~~~~~~-------- 229 (271)
T 3kmu_A 166 -------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEI-GMKVALEGLR-------- 229 (271)
T ss_dssp -------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHH-HHHHHHSCCC--------
T ss_pred -------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHH-HHHHHhcCCC--------
Confidence 2346899999999988765544 79999999999999999999976432211 1111111100
Q ss_pred hhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhh
Q 007680 503 ANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKV 552 (593)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 552 (593)
...+..+++++.+++.+||+.||++|||++|+++.|+++..
T Consensus 230 ---------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 230 ---------PTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp ---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred ---------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 01112345678999999999999999999999999999854
No 101
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=5.9e-42 Score=349.48 Aligned_cols=273 Identities=24% Similarity=0.379 Sum_probs=213.2
Q ss_pred cccccccCccCcccEEEEEeC-----CCCeEEEEEeehhh-HHHHHHHHHHHHHHhhcCCCCcceeeeeeecC--CceEE
Q 007680 274 FNECNLLGTSSFGSVYKGTIS-----DGTDVAIKVFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSYSNP--DFKAL 345 (593)
Q Consensus 274 ~~~~~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l 345 (593)
|++.+.||+|+||.||++.+. +++.||+|+++... ....+.+.+|++++++++||||+++++++.+. ...++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 499999999999999998643 68899999998653 34567789999999999999999999999874 57899
Q ss_pred EEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCC
Q 007680 346 VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGE 425 (593)
Q Consensus 346 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~ 425 (593)
||||+++++|.+++.... +++.++..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++.....
T Consensus 113 v~e~~~~~~L~~~l~~~~--~~~~~~~~i~~~l~~~l~~LH~~~----ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 186 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICEGMAYLHAQH----YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE 186 (318)
T ss_dssp EECCCTTCBHHHHGGGSC--CCHHHHHHHHHHHHHHHHHHHHTT----EECSCCSGGGEEECTTCCEEECCGGGCEECCT
T ss_pred EEecccCCcHHHHHhhCC--CCHHHHHHHHHHHHHHHHHHHhCC----ccCCCCchheEEEcCCCCEEECCccccccccc
Confidence 999999999999998765 899999999999999999999655 99999999999999999999999999998765
Q ss_pred CCCcc-ccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhh-hh
Q 007680 426 GEDSV-RQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVV-DA 503 (593)
Q Consensus 426 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 503 (593)
..... ......++..|+|||++.+..++.++||||||+++|||++|..||........... .......... ..
T Consensus 187 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~-----~~~~~~~~~~~~~ 261 (318)
T 3lxp_A 187 GHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELI-----GIAQGQMTVLRLT 261 (318)
T ss_dssp TCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHH-----CSCCHHHHHHHHH
T ss_pred cccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhh-----cccccchhHHHHH
Confidence 43321 12344578889999999988999999999999999999999999876321110000 0000000000 00
Q ss_pred hhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhhhcch
Q 007680 504 NLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVKFLDD 557 (593)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 557 (593)
.........+.+..++.++.+++.+||+.||++|||+.|+++.|+++...+...
T Consensus 262 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~~~ 315 (318)
T 3lxp_A 262 ELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQGQ 315 (318)
T ss_dssp HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHC-
T ss_pred HHHhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhccC
Confidence 000011111222345678999999999999999999999999999998887543
No 102
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=2.9e-42 Score=368.55 Aligned_cols=253 Identities=28% Similarity=0.427 Sum_probs=209.7
Q ss_pred hhhccccccccCccCcccEEEEEeCCCCeEEEEEeehhhHHHHHHHHHHHHHHhhcCCCCcceeeeeeecCC-ceEEEEe
Q 007680 270 ATDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPD-FKALVLE 348 (593)
Q Consensus 270 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lv~e 348 (593)
..++|++.+.||+|+||.||+|.+. |+.||||+++... ..+.+.+|++++++++||||+++++++...+ ..++|||
T Consensus 191 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e 267 (450)
T 1k9a_A 191 NMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 267 (450)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEE
T ss_pred ChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEE
Confidence 4578999999999999999999985 7899999997653 4567899999999999999999999987665 7899999
Q ss_pred ccCCCCHHHHHhhCCC-CCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCCCC
Q 007680 349 FMPNGSLEKWLYSHNY-FLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGE 427 (593)
Q Consensus 349 ~~~~gsL~~~l~~~~~-~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~ 427 (593)
|+++|+|.+++...+. .+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++......
T Consensus 268 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~----ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 343 (450)
T 1k9a_A 268 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN----FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ 343 (450)
T ss_dssp CCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTT----EECSCCCGGGEEECTTSCEEECCCTTCEECC---
T ss_pred ecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC----eeCCCCCHhhEEECCCCCEEEeeCCCcccccccc
Confidence 9999999999987654 4799999999999999999999655 9999999999999999999999999998643221
Q ss_pred CccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccchHHHHHHHhcCCchhhhhhhhhh
Q 007680 428 DSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLV 506 (593)
Q Consensus 428 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (593)
....++..|+|||++.+..++.++|||||||++|||+| |+.||......+ ....+...
T Consensus 344 -----~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~--~~~~i~~~-------------- 402 (450)
T 1k9a_A 344 -----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--VVPRVEKG-------------- 402 (450)
T ss_dssp --------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT--HHHHHHTT--------------
T ss_pred -----cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHcC--------------
Confidence 22356889999999999999999999999999999998 999997643221 11111111
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhh
Q 007680 507 REEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVK 553 (593)
Q Consensus 507 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 553 (593)
.....+..+++++.+++.+||+.||++|||+.++++.|+.+...
T Consensus 403 ---~~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 403 ---YKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp ---CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred ---CCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 01112234567899999999999999999999999999998653
No 103
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.2e-42 Score=352.20 Aligned_cols=270 Identities=24% Similarity=0.424 Sum_probs=211.0
Q ss_pred hhccccccccCccCcccEEEEEeCC-----CCeEEEEEeehhh-HHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceE
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTISD-----GTDVAIKVFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKA 344 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 344 (593)
.++|++.+.||+|+||.||+|.... +..||+|+++... ......+.+|+.++++++||||+++++++...+..+
T Consensus 43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 122 (333)
T 1mqb_A 43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM 122 (333)
T ss_dssp TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcE
Confidence 3578889999999999999998642 2359999997643 344567899999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecC
Q 007680 345 LVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424 (593)
Q Consensus 345 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~ 424 (593)
+||||+++++|.+++......+++.++..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++....
T Consensus 123 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~----ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~ 198 (333)
T 1mqb_A 123 IITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMN----YVHRDLAARNILVNSNLVCKVSDFGLSRVLE 198 (333)
T ss_dssp EEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTT----CCCSCCCGGGEEECTTCCEEECCCCC-----
T ss_pred EEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC----eeCCCCChheEEECCCCcEEECCCCcchhhc
Confidence 999999999999999887667999999999999999999999654 9999999999999999999999999998765
Q ss_pred CCCCcc-ccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccchHHHHHHHhcCCchhhhhh
Q 007680 425 EGEDSV-RQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRRWVKESLPHGLTEVVD 502 (593)
Q Consensus 425 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 502 (593)
...... ......+++.|+|||++.+..++.++||||||+++|||++ |+.||...... .....+....
T Consensus 199 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~--~~~~~~~~~~--------- 267 (333)
T 1mqb_A 199 DDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH--EVMKAINDGF--------- 267 (333)
T ss_dssp ------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHHHTTC---------
T ss_pred cccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHH--HHHHHHHCCC---------
Confidence 432211 1223346788999999998999999999999999999999 99999763221 1111111110
Q ss_pred hhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhhhcchhhccCC
Q 007680 503 ANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVKFLDDAAATNW 563 (593)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~~~~~ 563 (593)
..+.+..++..+.+++.+||+.||++||++.|++++|+++.......+....|
T Consensus 268 --------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~~~~~~~~~ 320 (333)
T 1mqb_A 268 --------RLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPDSLKTLADF 320 (333)
T ss_dssp --------CCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGGGGGSBCCC
T ss_pred --------cCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcchhhhhhcCC
Confidence 01112234567899999999999999999999999999988766544444433
No 104
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=6.3e-42 Score=341.57 Aligned_cols=255 Identities=20% Similarity=0.296 Sum_probs=209.6
Q ss_pred hhhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhh-HHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEEE
Q 007680 270 ATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVL 347 (593)
Q Consensus 270 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 347 (593)
..++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 84 (276)
T 2yex_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL 84 (276)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEE
Confidence 3578999999999999999999976 78999999997653 334567899999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCCCC
Q 007680 348 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGE 427 (593)
Q Consensus 348 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~ 427 (593)
||+++++|.+++.... .+++.++..++.|++.||+|||+++ ++||||||+||+++.++.+||+|||.+.......
T Consensus 85 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~----i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 159 (276)
T 2yex_A 85 EYCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 159 (276)
T ss_dssp ECCTTEEGGGGSBTTT-BCCHHHHHHHHHHHHHHHHHHHHTT----EECSCCSGGGEEECTTCCEEECCCTTCEECEETT
T ss_pred EecCCCcHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHHhCC----eeccCCChHHEEEccCCCEEEeeCCCccccCCCc
Confidence 9999999999987654 4899999999999999999999654 9999999999999999999999999998765433
Q ss_pred CccccccccCCccccCccccCCCCC-CccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhhhhhh
Q 007680 428 DSVRQTMTMATIGYMAPEYGLEGIV-SAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLV 506 (593)
Q Consensus 428 ~~~~~~~~~gt~~y~aPE~~~~~~~-s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (593)
.........|++.|+|||++.+..+ +.++||||||+++|||++|+.||............+.....
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~------------- 226 (276)
T 2yex_A 160 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT------------- 226 (276)
T ss_dssp EECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCT-------------
T ss_pred chhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhccc-------------
Confidence 2222344568999999999887765 78999999999999999999999774433222222221100
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 507 REEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 507 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
.......++..+.+++.+||+.||++|||+.|+++|
T Consensus 227 ----~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (276)
T 2yex_A 227 ----YLNPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (276)
T ss_dssp ----TSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ----ccCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence 001112345678999999999999999999999875
No 105
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1e-41 Score=342.38 Aligned_cols=266 Identities=21% Similarity=0.366 Sum_probs=216.1
Q ss_pred hhcccccc-ccCccCcccEEEEEeC---CCCeEEEEEeehhh-HHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEE
Q 007680 271 TDEFNECN-LLGTSSFGSVYKGTIS---DGTDVAIKVFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKAL 345 (593)
Q Consensus 271 ~~~~~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 345 (593)
.++|.+.+ .||+|+||.||+|.+. +++.||+|+++... ....+.+.+|++++++++||||+++++++ ..+..++
T Consensus 8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~l 86 (287)
T 1u59_A 8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALML 86 (287)
T ss_dssp GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEE
T ss_pred HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEE
Confidence 45677777 9999999999999853 57889999998642 34567889999999999999999999999 4567899
Q ss_pred EEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCC
Q 007680 346 VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGE 425 (593)
Q Consensus 346 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~ 425 (593)
||||+++++|.+++......+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++.....
T Consensus 87 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~----i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~ 162 (287)
T 1u59_A 87 VMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN----FVHRDLAARNVLLVNRHYAKISDFGLSKALGA 162 (287)
T ss_dssp EEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTT----EECCCCSGGGEEEEETTEEEECCCTTCEECTT
T ss_pred EEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCC----EeeCCCchheEEEcCCCCEEECcccceeeecc
Confidence 99999999999999876667999999999999999999999654 99999999999999999999999999988754
Q ss_pred CCCcc-ccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccchHHHHHHHhcCCchhhhhhh
Q 007680 426 GEDSV-RQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDA 503 (593)
Q Consensus 426 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 503 (593)
..... ......+|+.|+|||++.+..++.++||||||+++|||++ |+.||...... .....+.....
T Consensus 163 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~~i~~~~~--------- 231 (287)
T 1u59_A 163 DDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--EVMAFIEQGKR--------- 231 (287)
T ss_dssp CSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH--HHHHHHHTTCC---------
T ss_pred CcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH--HHHHHHhcCCc---------
Confidence 43221 1233456889999999988889999999999999999999 99999764321 12222211110
Q ss_pred hhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhhhcchhhc
Q 007680 504 NLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVKFLDDAAA 560 (593)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~~ 560 (593)
...+..+++++.+++.+||+.||++||++.|++++|+++........+.
T Consensus 232 --------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~~~~ 280 (287)
T 1u59_A 232 --------MECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKVEG 280 (287)
T ss_dssp --------CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTTCSS
T ss_pred --------CCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCCcccC
Confidence 0111234668899999999999999999999999999998776444443
No 106
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=4.4e-42 Score=354.95 Aligned_cols=252 Identities=23% Similarity=0.296 Sum_probs=191.7
Q ss_pred hhhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhhHHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEEEe
Q 007680 270 ATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVLE 348 (593)
Q Consensus 270 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 348 (593)
..++|++.+.||+|+||.||+|+.. +++.||+|+++... ..+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 128 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLE 128 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEE
Confidence 3568999999999999999999976 68899999998653 33568899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCC---CCcEEEEeeccceecCC
Q 007680 349 FMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDE---NMVAHVSDFGIYKLLGE 425 (593)
Q Consensus 349 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~---~~~~kL~Dfg~a~~~~~ 425 (593)
|+++++|.+++..... +++.++..++.|++.||+|||+++ |+||||||+||+++. ++.+||+|||+++....
T Consensus 129 ~~~~~~L~~~l~~~~~-~~~~~~~~i~~qi~~~L~~LH~~~----ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 203 (349)
T 2w4o_A 129 LVTGGELFDRIVEKGY-YSERDAADAVKQILEAVAYLHENG----IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEH 203 (349)
T ss_dssp CCCSCBHHHHHTTCSS-CCHHHHHHHHHHHHHHHHHHHHTT----CCCCCCCGGGEEESSSSTTCCEEECCCC-------
T ss_pred eCCCCCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCC----eEecCCCcccEEEecCCCCCCEEEccCccccccCc
Confidence 9999999999987654 899999999999999999999654 999999999999975 88999999999986543
Q ss_pred CCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhhhhh
Q 007680 426 GEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANL 505 (593)
Q Consensus 426 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 505 (593)
.. ......||+.|+|||++.+..++.++|||||||++|||++|+.||.........+......... .
T Consensus 204 ~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~-~--------- 270 (349)
T 2w4o_A 204 QV---LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYY-F--------- 270 (349)
T ss_dssp ------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCC-C---------
T ss_pred cc---ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCc-c---------
Confidence 22 1234568999999999999999999999999999999999999997643222111111110000 0
Q ss_pred hhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 506 VREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 506 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
..+....++.++.+++.+||+.||++|||+.|+++|
T Consensus 271 -----~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 271 -----ISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp -----CTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred -----CCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000112345678999999999999999999999985
No 107
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=2.1e-42 Score=351.89 Aligned_cols=268 Identities=23% Similarity=0.395 Sum_probs=203.7
Q ss_pred HHHHHhhhccccccccCccCcccEEEEEeC----CCCeEEEEEeehh--hHHHHHHHHHHHHHHhhcCCCCcceeeeeee
Q 007680 265 LDIQRATDEFNECNLLGTSSFGSVYKGTIS----DGTDVAIKVFNLQ--LERAFRSFDSECEVLRNVRHRNLIKILSSYS 338 (593)
Q Consensus 265 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 338 (593)
.++....++|.+.+.||+|+||.||+|... +++.||+|+++.. .....+.+.+|+.++++++||||+++++++.
T Consensus 27 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 106 (313)
T 3brb_A 27 EDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCI 106 (313)
T ss_dssp TTTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEE
T ss_pred HhcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEe
Confidence 334445678999999999999999999854 3458999998754 2345577899999999999999999999998
Q ss_pred cCC-----ceEEEEeccCCCCHHHHHhhC-----CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCC
Q 007680 339 NPD-----FKALVLEFMPNGSLEKWLYSH-----NYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDE 408 (593)
Q Consensus 339 ~~~-----~~~lv~e~~~~gsL~~~l~~~-----~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~ 408 (593)
+.+ ..++||||+++++|.+++... ...+++..++.++.|++.||.|||++ +|+||||||+||+++.
T Consensus 107 ~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~----~ivH~dikp~NIli~~ 182 (313)
T 3brb_A 107 EMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR----NFLHRDLAARNCMLRD 182 (313)
T ss_dssp C-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT----TCCCCCCSGGGEEECT
T ss_pred eccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC----CcccCCCCcceEEEcC
Confidence 765 359999999999999998532 23599999999999999999999954 5999999999999999
Q ss_pred CCcEEEEeeccceecCCCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccchHHH
Q 007680 409 NMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRR 487 (593)
Q Consensus 409 ~~~~kL~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~ellt-g~~pf~~~~~~~~~~~~ 487 (593)
++.+||+|||++................+++.|+|||.+.+..++.++||||||+++|+|++ |..||...... ....
T Consensus 183 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~~ 260 (313)
T 3brb_A 183 DMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH--EMYD 260 (313)
T ss_dssp TSCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHHH
T ss_pred CCcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHH--HHHH
Confidence 99999999999987654433223344567889999999999999999999999999999999 88998764222 1111
Q ss_pred HHHHhcCCchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhhhc
Q 007680 488 WVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVKFL 555 (593)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~ 555 (593)
....... ...+..++.++.+++.+||+.||++|||+.+++++|+++.....
T Consensus 261 ~~~~~~~-----------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~lp 311 (313)
T 3brb_A 261 YLLHGHR-----------------LKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLP 311 (313)
T ss_dssp HHHTTCC-----------------CCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred HHHcCCC-----------------CCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcC
Confidence 1111110 01112345678999999999999999999999999999987653
No 108
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=2.3e-42 Score=358.60 Aligned_cols=253 Identities=21% Similarity=0.269 Sum_probs=195.7
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhhHHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEEEec
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVLEF 349 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 349 (593)
.++|++.+.||+|+||.||+++.. +++.||+|++..... ..+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 97 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY 97 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence 568999999999999999999976 789999999976432 235688999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCc--EEEEeeccceecCCCC
Q 007680 350 MPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMV--AHVSDFGIYKLLGEGE 427 (593)
Q Consensus 350 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~--~kL~Dfg~a~~~~~~~ 427 (593)
+++|+|.+++...+. +++..+..++.|++.||+|||+++ |+||||||+||+++.++. +||+|||+++......
T Consensus 98 ~~~~~L~~~l~~~~~-~~~~~~~~i~~ql~~~L~~LH~~~----ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~ 172 (361)
T 3uc3_A 98 ASGGELYERICNAGR-FSEDEARFFFQQLLSGVSYCHSMQ----ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS 172 (361)
T ss_dssp CCSCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHTT----CCSCCCCGGGEEECSSSSCCEEECCCCCC-------
T ss_pred CCCCCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCC----cccCCCCHHHEEEcCCCCceEEEeecCccccccccC
Confidence 999999999977554 999999999999999999999655 999999999999987765 9999999987533222
Q ss_pred CccccccccCCccccCccccCCCCCCcc-chHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhhhhhh
Q 007680 428 DSVRQTMTMATIGYMAPEYGLEGIVSAK-CDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLV 506 (593)
Q Consensus 428 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~-~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (593)
......||+.|+|||++.+..++.+ +|||||||++|+|++|+.||....... .+.........
T Consensus 173 ---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~-~~~~~~~~~~~------------ 236 (361)
T 3uc3_A 173 ---QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPR-DYRKTIQRILS------------ 236 (361)
T ss_dssp -----------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CC-CHHHHHHHHHT------------
T ss_pred ---CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHH-HHHHHHHHHhc------------
Confidence 2234569999999999888877655 899999999999999999997643221 11111111100
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 507 REEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 507 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
.....+....+++++.+++.+||+.||++|||+.|+++|
T Consensus 237 -~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 237 -VKYSIPDDIRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp -TCCCCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred -CCCCCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 000111111235678999999999999999999999987
No 109
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=5.6e-43 Score=351.74 Aligned_cols=252 Identities=21% Similarity=0.316 Sum_probs=205.4
Q ss_pred hhccccccccCccCcccEEEEEeC-CC-------CeEEEEEeehhhHHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCc
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DG-------TDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDF 342 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~-------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 342 (593)
.++|++.+.||+|+||.||+|+.. ++ ..||+|++........+.+.+|++++++++||||+++++++.+++.
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE 86 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence 468999999999999999999865 33 4699999987766667889999999999999999999999999999
Q ss_pred eEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCc--------EEE
Q 007680 343 KALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMV--------AHV 414 (593)
Q Consensus 343 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~--------~kL 414 (593)
.++||||+++++|.+++......+++..+..++.|++.||+|||+++ |+||||||+||+++.++. +||
T Consensus 87 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~----ivH~Dlkp~NIll~~~~~~~~~~~~~~kl 162 (289)
T 4fvq_A 87 NILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENT----LIHGNVCAKNILLIREEDRKTGNPPFIKL 162 (289)
T ss_dssp CEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTT----CCCCCCCGGGEEEEECCBGGGTBCCEEEE
T ss_pred CEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCC----eECCCcCcceEEEecCCcccccccceeee
Confidence 99999999999999999887767999999999999999999999655 999999999999998887 999
Q ss_pred EeeccceecCCCCCccccccccCCccccCccccCC-CCCCccchHHHHHHHHHHHHhCCC-CCCccccccchHHHHHHHh
Q 007680 415 SDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLE-GIVSAKCDVYSYGVLLMETFTRKR-PTDEMFIGEMSLRRWVKES 492 (593)
Q Consensus 415 ~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DvwSlGvvl~elltg~~-pf~~~~~~~~~~~~~~~~~ 492 (593)
+|||.+..... .....+++.|+|||++.+ ..++.++||||||+++|||++|.. ||.... ... ........
T Consensus 163 ~Dfg~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~-~~~-~~~~~~~~ 234 (289)
T 4fvq_A 163 SDPGISITVLP------KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALD-SQR-KLQFYEDR 234 (289)
T ss_dssp CCCCSCTTTSC------HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSC-HHH-HHHHHHTT
T ss_pred ccCcccccccC------ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccc-hHH-HHHHhhcc
Confidence 99999865432 122357889999999887 679999999999999999999654 443321 111 11111100
Q ss_pred cCCchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhh
Q 007680 493 LPHGLTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVK 553 (593)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 553 (593)
. ..+...+.++.+++.+||+.||++|||+.|++++|+++...
T Consensus 235 --~-----------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p 276 (289)
T 4fvq_A 235 --H-----------------QLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTP 276 (289)
T ss_dssp --C-----------------CCCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC--
T ss_pred --C-----------------CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCC
Confidence 0 00011234678999999999999999999999999998653
No 110
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.6e-42 Score=356.30 Aligned_cols=285 Identities=23% Similarity=0.321 Sum_probs=202.0
Q ss_pred hhccccccccCccCcccEEEEEeCCCCeEEEEEeehhhHHHHHHHHHHHHHHhhcCCCCcceeeeeee-----cCCceEE
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYS-----NPDFKAL 345 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-----~~~~~~l 345 (593)
.++|++.+.||+|+||.||+|+. +++.||||+++...... .....|+..+..++||||+++++.+. .....++
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~-~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~l 89 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQN-FINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLL 89 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGGHHH-HHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccchhh-HHHHHHHHHHHhccCcchhhheecccccccCCCceEEE
Confidence 57899999999999999999987 68999999997653321 12233444455689999999997543 2336789
Q ss_pred EEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCC-----CCCeEecCCCCCCeeeCCCCcEEEEeeccc
Q 007680 346 VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHS-----SVHIIHCDLKPTNILLDENMVAHVSDFGIY 420 (593)
Q Consensus 346 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~-----~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 420 (593)
||||+++|+|.+++.... .++..+..++.|++.||+|||++.. ..+|+||||||+||+++.++.+||+|||++
T Consensus 90 v~e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a 167 (336)
T 3g2f_A 90 VMEYYPNGSLXKYLSLHT--SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLS 167 (336)
T ss_dssp EECCCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTC
T ss_pred EEecCCCCcHHHHHhhcc--cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeeccce
Confidence 999999999999998765 6899999999999999999996400 116999999999999999999999999999
Q ss_pred eecCCCCC------ccccccccCCccccCccccCC-------CCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHH
Q 007680 421 KLLGEGED------SVRQTMTMATIGYMAPEYGLE-------GIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRR 487 (593)
Q Consensus 421 ~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~-------~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~ 487 (593)
+.+..... ........||+.|+|||++.+ ..++.++|||||||++|||++|..||............
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~ 247 (336)
T 3g2f_A 168 MRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMA 247 (336)
T ss_dssp EECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCT
T ss_pred eecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHh
Confidence 87654321 112234469999999999876 45678999999999999999997776432111100000
Q ss_pred HHHHhc-CCchhh---hhhhhhhh--hhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhhhcchhh
Q 007680 488 WVKESL-PHGLTE---VVDANLVR--EEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVKFLDDAA 559 (593)
Q Consensus 488 ~~~~~~-~~~~~~---~~~~~~~~--~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~ 559 (593)
+..... .....+ .+...... ..........+++++.+++.+||+.||++|||++|+++.|+++...+.....
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~~~~~ 325 (336)
T 3g2f_A 248 FQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWERNKS 325 (336)
T ss_dssp THHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCCC---
T ss_pred hhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHHhccc
Confidence 000000 000000 00000000 0001111234567899999999999999999999999999999887755443
No 111
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1.1e-42 Score=349.36 Aligned_cols=262 Identities=23% Similarity=0.364 Sum_probs=216.8
Q ss_pred HHhhhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhhHHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEE
Q 007680 268 QRATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALV 346 (593)
Q Consensus 268 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 346 (593)
....++|++.+.||+|+||.||+|.+. +++.||+|+++... ...+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 9 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v 87 (288)
T 3kfa_A 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 87 (288)
T ss_dssp BCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEE
T ss_pred cccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEE
Confidence 345778999999999999999999976 58899999997543 3456788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCC
Q 007680 347 LEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGE 425 (593)
Q Consensus 347 ~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~ 425 (593)
|||+++++|.+++.... ..+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||.+.....
T Consensus 88 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~----i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~ 163 (288)
T 3kfa_A 88 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN----FIHRDLAARNCLVGENHLVKVADFGLSRLMTG 163 (288)
T ss_dssp EECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHT----CCCSCCSGGGEEECGGGCEEECCCCGGGTSCS
T ss_pred EEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCC----ccCCCCCcceEEEcCCCCEEEccCccceeccC
Confidence 99999999999998744 35899999999999999999999765 99999999999999999999999999987654
Q ss_pred CCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccchHHHHHHHhcCCchhhhhhhh
Q 007680 426 GEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDAN 504 (593)
Q Consensus 426 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 504 (593)
... .......+++.|+|||++.+..++.++||||||+++|+|++ |..||...... ...........
T Consensus 164 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~--~~~~~~~~~~~---------- 230 (288)
T 3kfa_A 164 DTY-TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLEKDYR---------- 230 (288)
T ss_dssp SSS-EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHHHHHHTTCC----------
T ss_pred Ccc-ccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHhccCC----------
Confidence 332 22233457888999999988899999999999999999999 99999764221 11221111110
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhhh
Q 007680 505 LVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVKF 554 (593)
Q Consensus 505 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 554 (593)
...+..+++.+.+++.+||+.||++|||+.|+++.|+.+....
T Consensus 231 -------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~ 273 (288)
T 3kfa_A 231 -------MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273 (288)
T ss_dssp -------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred -------CCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHhc
Confidence 1111234568899999999999999999999999999887654
No 112
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=8.7e-42 Score=342.12 Aligned_cols=252 Identities=21% Similarity=0.312 Sum_probs=207.4
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhh--HHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEEE
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVL 347 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 347 (593)
.++|++.+.||+|+||.||+|.+. +++.||+|++.... ....+.+.+|+.++++++||||+++++++.+++..++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 578999999999999999999975 68999999997653 345577889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCc---EEEEeeccceecC
Q 007680 348 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMV---AHVSDFGIYKLLG 424 (593)
Q Consensus 348 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~---~kL~Dfg~a~~~~ 424 (593)
||+++++|.+.+..... +++..+..++.|++.||+|||+++ |+||||||+||+++.++. +||+|||.+....
T Consensus 85 e~~~~~~l~~~~~~~~~-~~~~~~~~~~~~i~~~l~~lH~~~----i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~ 159 (284)
T 3kk8_A 85 DLVTGGELFEDIVAREF-YSEADASHCIQQILESIAYCHSNG----IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 159 (284)
T ss_dssp CCCCSCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHTT----EECSCCCGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred ecCCCCCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCC----cCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcc
Confidence 99999999998877654 899999999999999999999655 999999999999986655 9999999998765
Q ss_pred CCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhhhh
Q 007680 425 EGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDAN 504 (593)
Q Consensus 425 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 504 (593)
.... .....||+.|+|||++.+..++.++||||||+++|+|++|+.||...... .....+.......
T Consensus 160 ~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~--~~~~~~~~~~~~~-------- 226 (284)
T 3kk8_A 160 DSEA---WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH--RLYAQIKAGAYDY-------- 226 (284)
T ss_dssp SSCB---CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHTCCCC--------
T ss_pred cCcc---ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchh--HHHHHHHhccccC--------
Confidence 4332 23456899999999999999999999999999999999999999763211 1111111111000
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 505 LVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 505 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
..+....+++++.+++.+||+.||++|||+.|+++|
T Consensus 227 ------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 227 ------PSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp ------CTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred ------CchhhcccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 001112345678999999999999999999999986
No 113
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=9.6e-43 Score=354.18 Aligned_cols=260 Identities=22% Similarity=0.353 Sum_probs=199.0
Q ss_pred hhccccccccCccCcccEEEEEe-CCCCeEEEEEeehhh---HHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCc----
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTI-SDGTDVAIKVFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDF---- 342 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~---- 342 (593)
.++|++.+.||+|+||.||+|++ .+++.||+|+++... ......+.+|+.++++++||||+++++++...+.
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 46899999999999999999996 478999999997642 3445678999999999999999999999876553
Q ss_pred eEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeecccee
Q 007680 343 KALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKL 422 (593)
Q Consensus 343 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~ 422 (593)
.++||||+++++|.+++...+. +++.++..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++..
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~~~-~~~~~~~~~~~qi~~~l~~lH~~~----ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~ 165 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTEGP-MTPKRAIEVIADACQALNFSHQNG----IIHRDVKPANIMISATNAVKVMDFGIARA 165 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHHCS-CCHHHHHHHHHHHHHHHHHHHHTT----CCCCCCCGGGEEEETTSCEEECCCSCC--
T ss_pred cEEEEecCCCCCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCC----CCcCCCCHHHEEEcCCCCEEEeeccCccc
Confidence 4999999999999999987654 899999999999999999999655 99999999999999999999999999987
Q ss_pred cCCCCCc-cccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhh
Q 007680 423 LGEGEDS-VRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVV 501 (593)
Q Consensus 423 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 501 (593)
+...... .......||+.|+|||++.+..++.++||||||+++|||++|+.||......... ........
T Consensus 166 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~-~~~~~~~~-------- 236 (311)
T 3ork_A 166 IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVA-YQHVREDP-------- 236 (311)
T ss_dssp ----------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH-HHHHHCCC--------
T ss_pred ccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHH-HHHhcCCC--------
Confidence 6543322 1223456899999999999999999999999999999999999999764221110 11111000
Q ss_pred hhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH-HHHHhh
Q 007680 502 DANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAA-KLKKIK 551 (593)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~-~L~~i~ 551 (593)
. ........++.++.+++.+||+.||++||++.+++. .+..+.
T Consensus 237 ----~---~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 280 (311)
T 3ork_A 237 ----I---PPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH 280 (311)
T ss_dssp ----C---CHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred ----C---CcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHh
Confidence 0 000111234668899999999999999997666554 455544
No 114
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=8.2e-43 Score=373.33 Aligned_cols=261 Identities=23% Similarity=0.385 Sum_probs=213.9
Q ss_pred HHhhhccccccccCccCcccEEEEEeCCCCeEEEEEeehhhHHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEEE
Q 007680 268 QRATDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVL 347 (593)
Q Consensus 268 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 347 (593)
....++|++.+.||+|+||.||+|.++++..||||+++... ...+.+.+|+.++++++||||+++++++. .+..++||
T Consensus 184 ~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~ 261 (454)
T 1qcf_A 184 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIIT 261 (454)
T ss_dssp BCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred eechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEE
Confidence 34567899999999999999999999888999999998653 24568999999999999999999999986 56789999
Q ss_pred eccCCCCHHHHHhhCCC-CCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCCC
Q 007680 348 EFMPNGSLEKWLYSHNY-FLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEG 426 (593)
Q Consensus 348 e~~~~gsL~~~l~~~~~-~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~ 426 (593)
||+++|+|.+++..... .+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 262 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~----ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~ 337 (454)
T 1qcf_A 262 EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN----YIHRDLRAANILVSASLVCKIADFGLARVIEDN 337 (454)
T ss_dssp CCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT----CCCSSCSGGGEEECTTCCEEECSTTGGGGBCCH
T ss_pred eecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC----ccCCCCCHHHEEECCCCcEEEeeCCCceEcCCC
Confidence 99999999999975432 5889999999999999999999654 999999999999999999999999999876432
Q ss_pred CCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccchHHHHHHHhcCCchhhhhhhhh
Q 007680 427 EDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANL 505 (593)
Q Consensus 427 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 505 (593)
.. .......++..|+|||++.+..++.++|||||||++|||+| |+.||...... .....+....
T Consensus 338 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~--~~~~~i~~~~------------ 402 (454)
T 1qcf_A 338 EY-TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP--EVIRALERGY------------ 402 (454)
T ss_dssp HH-HTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HHHHHHHHTC------------
T ss_pred ce-eccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCC------------
Confidence 11 11223346788999999988899999999999999999999 99999764221 1111111110
Q ss_pred hhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhhh
Q 007680 506 VREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVKF 554 (593)
Q Consensus 506 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 554 (593)
..+.+..+++++.+++.+||+.||++|||+.++++.|+++....
T Consensus 403 -----~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~~ 446 (454)
T 1qcf_A 403 -----RMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTAT 446 (454)
T ss_dssp -----CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSSS
T ss_pred -----CCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhcc
Confidence 11112345678999999999999999999999999999986543
No 115
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.1e-41 Score=357.46 Aligned_cols=274 Identities=22% Similarity=0.297 Sum_probs=197.8
Q ss_pred HhhhccccccccCccCcccEEEEEeC-CCCeEEEEEeehh--hHHHHHHHHHHHHHHhhcC-CCCcceeeeeeecCC--c
Q 007680 269 RATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQ--LERAFRSFDSECEVLRNVR-HRNLIKILSSYSNPD--F 342 (593)
Q Consensus 269 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~--~ 342 (593)
...++|++.+.||+|+||.||+|.+. +|+.||||++... .......+.+|+.++.++. ||||+++++++...+ .
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~ 85 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD 85 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence 34678999999999999999999965 7899999998643 2345567889999999997 999999999997544 7
Q ss_pred eEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeecccee
Q 007680 343 KALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKL 422 (593)
Q Consensus 343 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~ 422 (593)
.|+||||++ ++|.+++.... +++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++.
T Consensus 86 ~~lv~e~~~-~~L~~~~~~~~--~~~~~~~~i~~qi~~~L~~LH~~~----ivHrDlkp~NIll~~~~~~kl~DFG~a~~ 158 (388)
T 3oz6_A 86 VYLVFDYME-TDLHAVIRANI--LEPVHKQYVVYQLIKVIKYLHSGG----LLHRDMKPSNILLNAECHVKVADFGLSRS 158 (388)
T ss_dssp EEEEEECCS-EEHHHHHHHTC--CCHHHHHHHHHHHHHHHHHHHHTT----EECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEecccC-cCHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHhCC----EEeCCCCHHHeEEcCCCCEEecCCccccc
Confidence 899999996 69999998753 899999999999999999999654 99999999999999999999999999987
Q ss_pred cCCCCC-------------------ccccccccCCccccCccccCC-CCCCccchHHHHHHHHHHHHhCCCCCCcccccc
Q 007680 423 LGEGED-------------------SVRQTMTMATIGYMAPEYGLE-GIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGE 482 (593)
Q Consensus 423 ~~~~~~-------------------~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~ 482 (593)
+..... ........||+.|+|||++.+ ..++.++||||+||++|||++|++||.+.....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~ 238 (388)
T 3oz6_A 159 FVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMN 238 (388)
T ss_dssp SSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred ccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 643111 111234579999999999876 679999999999999999999999997642211
Q ss_pred chHHHHHHHh-cCCc----------hhhhhhhhh-----------------hhhhhhhhhhHHHHHHHHHHHhhcccCCC
Q 007680 483 MSLRRWVKES-LPHG----------LTEVVDANL-----------------VREEQAFSAKMDCILSIMDFALDCCMESP 534 (593)
Q Consensus 483 ~~~~~~~~~~-~~~~----------~~~~~~~~~-----------------~~~~~~~~~~~~~~~~l~~li~~cl~~dP 534 (593)
.+....... .|.. ....+.... ............+++++.+|+.+||+.||
T Consensus 239 -~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP 317 (388)
T 3oz6_A 239 -QLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNP 317 (388)
T ss_dssp -HHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSG
T ss_pred -HHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCc
Confidence 111111110 0100 000000000 00000000111345688999999999999
Q ss_pred CCCCCHHHHHHH--HHHh
Q 007680 535 DMRINMTDAAAK--LKKI 550 (593)
Q Consensus 535 ~~RPs~~evl~~--L~~i 550 (593)
++|||++|+++| ++..
T Consensus 318 ~~R~t~~e~l~Hp~~~~~ 335 (388)
T 3oz6_A 318 NKRISANDALKHPFVSIF 335 (388)
T ss_dssp GGSCCHHHHTTSTTTTTT
T ss_pred ccCCCHHHHhCCHHHHHh
Confidence 999999999988 5544
No 116
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.3e-42 Score=355.69 Aligned_cols=259 Identities=25% Similarity=0.421 Sum_probs=203.1
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeE----EEEEeehh-hHHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceE
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDV----AIKVFNLQ-LERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKA 344 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~v----avK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 344 (593)
.++|++.+.||+|+||.||+|++. +++.+ |+|.+... .....+.+.+|+.++++++||||+++++++.... .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~ 92 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence 468999999999999999999964 55554 66666433 2334567899999999999999999999998765 78
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecC
Q 007680 345 LVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424 (593)
Q Consensus 345 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~ 424 (593)
+|+||+.+|+|.+++......+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++...
T Consensus 93 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~----ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~ 168 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLG 168 (327)
T ss_dssp EEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT----CCCSCCCGGGEEEEETTEEEECCTTC-----
T ss_pred EEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCC----CcCCCCCHHHEEEcCCCCEEEccCcceeEcc
Confidence 999999999999999887777999999999999999999999655 9999999999999999999999999998775
Q ss_pred CCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccchHHHHHHHhcCCchhhhhhh
Q 007680 425 EGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDA 503 (593)
Q Consensus 425 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 503 (593)
............+|+.|+|||++.+..++.++|||||||++|||++ |+.||....... ....+....
T Consensus 169 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~--~~~~~~~~~---------- 236 (327)
T 3lzb_A 169 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE--ISSILEKGE---------- 236 (327)
T ss_dssp -----------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HHHHHHTTC----------
T ss_pred CccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH--HHHHHHcCC----------
Confidence 5443333344557889999999999999999999999999999999 999997743222 222221111
Q ss_pred hhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhh
Q 007680 504 NLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVK 553 (593)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 553 (593)
..+.+..++.++.+++.+||+.||++|||+.|+++.|+++...
T Consensus 237 -------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 237 -------RLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp -------CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred -------CCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 0111123456789999999999999999999999999998744
No 117
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=8.9e-43 Score=356.00 Aligned_cols=267 Identities=23% Similarity=0.376 Sum_probs=216.0
Q ss_pred HHHHHHhhhccccccccCccCcccEEEEEeC------CCCeEEEEEeehhh-HHHHHHHHHHHHHHhhcCCCCcceeeee
Q 007680 264 YLDIQRATDEFNECNLLGTSSFGSVYKGTIS------DGTDVAIKVFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSS 336 (593)
Q Consensus 264 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~ 336 (593)
..++....++|++.+.||+|+||.||+|.+. +++.||+|++.... ......+.+|+.++++++||||++++++
T Consensus 17 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~ 96 (322)
T 1p4o_A 17 PDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGV 96 (322)
T ss_dssp CCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEE
T ss_pred hhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEE
Confidence 3444556789999999999999999999854 36789999997543 3445678999999999999999999999
Q ss_pred eecCCceEEEEeccCCCCHHHHHhhCC---------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeC
Q 007680 337 YSNPDFKALVLEFMPNGSLEKWLYSHN---------YFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLD 407 (593)
Q Consensus 337 ~~~~~~~~lv~e~~~~gsL~~~l~~~~---------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~ 407 (593)
+.+.+..++||||+++|+|.+++...+ ..+++..+..++.|++.||+|||+++ |+||||||+||+++
T Consensus 97 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~----i~H~dikp~NIli~ 172 (322)
T 1p4o_A 97 VSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK----FVHRDLAARNCMVA 172 (322)
T ss_dssp ECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT----CBCSCCSGGGEEEC
T ss_pred EccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCC----CccCCCccceEEEc
Confidence 999999999999999999999987632 24789999999999999999999655 99999999999999
Q ss_pred CCCcEEEEeeccceecCCCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccchHH
Q 007680 408 ENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLR 486 (593)
Q Consensus 408 ~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~ellt-g~~pf~~~~~~~~~~~ 486 (593)
.++.+||+|||++................+|+.|+|||++.+..++.++||||||+++|||++ |+.||...... ...
T Consensus 173 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~ 250 (322)
T 1p4o_A 173 EDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE--QVL 250 (322)
T ss_dssp TTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHH--HHH
T ss_pred CCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHH--HHH
Confidence 999999999999986654332222334457889999999988899999999999999999999 89999763221 111
Q ss_pred HHHHHhcCCchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhh
Q 007680 487 RWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVK 553 (593)
Q Consensus 487 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 553 (593)
..+.... . ......++..+.+++.+||+.||++|||+.|++++|+++...
T Consensus 251 ~~~~~~~-----------~------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~ 300 (322)
T 1p4o_A 251 RFVMEGG-----------L------LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 300 (322)
T ss_dssp HHHHTTC-----------C------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCT
T ss_pred HHHHcCC-----------c------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhcc
Confidence 1111110 0 011123456789999999999999999999999999887543
No 118
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=1.3e-41 Score=342.77 Aligned_cols=275 Identities=18% Similarity=0.221 Sum_probs=213.7
Q ss_pred hhhccccccccCccCcccEEEEEe-CCCCeEEEEEeehhhHHHHHHHHHHHHHHhhcCCCCcceeeeee-ecCCceEEEE
Q 007680 270 ATDEFNECNLLGTSSFGSVYKGTI-SDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSY-SNPDFKALVL 347 (593)
Q Consensus 270 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~lv~ 347 (593)
..++|++.+.||+|+||.||+|+. .+++.||+|++..... ...+.+|+.+++.++|++++..+..+ ...+..++||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence 457899999999999999999996 4789999998765432 24578899999999988877766655 6677889999
Q ss_pred eccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeee---CCCCcEEEEeeccceecC
Q 007680 348 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILL---DENMVAHVSDFGIYKLLG 424 (593)
Q Consensus 348 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll---~~~~~~kL~Dfg~a~~~~ 424 (593)
||+ +++|.+++......+++.++..++.|++.||+|||+++ |+||||||+||++ +.++.+||+|||+++...
T Consensus 85 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~----ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~ 159 (296)
T 4hgt_A 85 ELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKN----FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR 159 (296)
T ss_dssp ECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT----EECSCCSGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred Ecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC----eecCCCCHHHeeeeccCCCCeEEEecCccceecc
Confidence 999 99999999876667999999999999999999999655 9999999999999 788999999999998876
Q ss_pred CCCCcc-----ccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccc--hHHHHHHHhcCCch
Q 007680 425 EGEDSV-----RQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEM--SLRRWVKESLPHGL 497 (593)
Q Consensus 425 ~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~--~~~~~~~~~~~~~~ 497 (593)
...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ........
T Consensus 160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~------ 233 (296)
T 4hgt_A 160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEK------ 233 (296)
T ss_dssp CTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHH------
T ss_pred CcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcc------
Confidence 543211 22345789999999999999999999999999999999999999976432211 11111110
Q ss_pred hhhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhhhcch-hhccCCcc
Q 007680 498 TEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVKFLDD-AAATNWRN 565 (593)
Q Consensus 498 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~-~~~~~~~~ 565 (593)
..... .......+++++.+++.+||+.||++|||++++++.|+++......+ ....+|..
T Consensus 234 ------~~~~~--~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~~~~~~~~dw~~ 294 (296)
T 4hgt_A 234 ------KMSTP--IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNM 294 (296)
T ss_dssp ------HHHSC--HHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHTCCTTCCCGGGG
T ss_pred ------cccch--hhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhCCCccCccchhh
Confidence 00000 00011234668999999999999999999999999999998876433 34567765
No 119
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=3.3e-42 Score=352.70 Aligned_cols=249 Identities=21% Similarity=0.270 Sum_probs=195.9
Q ss_pred hhccccccccCccCcccEEEEEe----CCCCeEEEEEeehhh----HHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCc
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTI----SDGTDVAIKVFNLQL----ERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDF 342 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 342 (593)
.++|++.+.||+|+||.||+|+. .+|+.||+|+++... ......+.+|+.++++++||||+++++++...+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 57899999999999999999986 478999999997642 2334567889999999999999999999999999
Q ss_pred eEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeecccee
Q 007680 343 KALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKL 422 (593)
Q Consensus 343 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~ 422 (593)
.++||||+++++|.+++..... +++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++.
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~qi~~al~~lH~~~----ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~ 170 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLEREGI-FMEDTACFYLAEISMALGHLHQKG----IIYRDLKPENIMLNHQGHVKLTDFGLCKE 170 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHTT----CCCCCCCTTTEEECTTSCEEECCCSCC--
T ss_pred EEEEEeCCCCCcHHHHHHhCCC-CCHHHHHHHHHHHHHHHHHHHhCC----EEcccCCHHHeEECCCCcEEEEeCCcccc
Confidence 9999999999999999987654 899999999999999999999655 99999999999999999999999999876
Q ss_pred cCCCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhh
Q 007680 423 LGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVD 502 (593)
Q Consensus 423 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 502 (593)
...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+....
T Consensus 171 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--~~~~~i~~~~--------- 237 (327)
T 3a62_A 171 SIHDGT--VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRK--KTIDKILKCK--------- 237 (327)
T ss_dssp ----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHTC---------
T ss_pred cccCCc--cccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHH--HHHHHHHhCC---------
Confidence 433221 223456899999999999999999999999999999999999999763211 1111111100
Q ss_pred hhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCC-----CHHHHHHH
Q 007680 503 ANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRI-----NMTDAAAK 546 (593)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 546 (593)
. ..+..++.++.+++.+||+.||++|| ++.|+++|
T Consensus 238 --~-------~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h 277 (327)
T 3a62_A 238 --L-------NLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH 277 (327)
T ss_dssp --C-------CCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred --C-------CCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence 0 00112356789999999999999999 77888876
No 120
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=3.8e-42 Score=343.72 Aligned_cols=250 Identities=23% Similarity=0.393 Sum_probs=187.0
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhhH---HHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEE
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLE---RAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALV 346 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 346 (593)
.++|++.+.||+|+||.||+|+.. +|+.||+|++..... ...+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 468999999999999999999974 799999999976532 2346789999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCCC
Q 007680 347 LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEG 426 (593)
Q Consensus 347 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~ 426 (593)
|||+++++|.+++......+++.++..++.|+++||+|||+++ |+||||||+||+++.++.+||+|||.+......
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~----i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 165 (278)
T 3cok_A 90 LEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHG----ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMP 165 (278)
T ss_dssp EECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTT----EECSSCCGGGEEECTTCCEEECCCTTCEECC--
T ss_pred EecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC----eecCCCCHHHEEEcCCCCEEEEeecceeeccCC
Confidence 9999999999999887667999999999999999999999654 999999999999999999999999999876533
Q ss_pred CCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhhhhhh
Q 007680 427 EDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLV 506 (593)
Q Consensus 427 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (593)
.. ......+|+.|+|||++.+..++.++||||||+++|||++|+.||........ .. .......
T Consensus 166 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-----~~--------~~~~~~~- 229 (278)
T 3cok_A 166 HE--KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT-----LN--------KVVLADY- 229 (278)
T ss_dssp ----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC------------------CCSSCC-
T ss_pred CC--cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH-----HH--------HHhhccc-
Confidence 22 12335689999999999988999999999999999999999999976321110 00 0000000
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 507 REEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 507 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
..+..++.++.+++.+||+.||++|||++|+++|
T Consensus 230 ------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 263 (278)
T 3cok_A 230 ------EMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDH 263 (278)
T ss_dssp ------CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred ------CCccccCHHHHHHHHHHcccCHhhCCCHHHHhcC
Confidence 0111235578999999999999999999999875
No 121
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=6e-42 Score=353.35 Aligned_cols=261 Identities=23% Similarity=0.287 Sum_probs=204.9
Q ss_pred HHHHhhhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhh-----HHHHHHHHHHHHHHhhcCCCCcceeeeeeec
Q 007680 266 DIQRATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQL-----ERAFRSFDSECEVLRNVRHRNLIKILSSYSN 339 (593)
Q Consensus 266 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 339 (593)
++....++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+
T Consensus 20 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~ 99 (345)
T 3hko_A 20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED 99 (345)
T ss_dssp CHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred hhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc
Confidence 35566789999999999999999999975 78899999997652 3445788999999999999999999999999
Q ss_pred CCceEEEEeccCCCCHHHHHhhC---------------------------------------CCCCCHHHHHHHHHHHHH
Q 007680 340 PDFKALVLEFMPNGSLEKWLYSH---------------------------------------NYFLDILERLNIMIDVGS 380 (593)
Q Consensus 340 ~~~~~lv~e~~~~gsL~~~l~~~---------------------------------------~~~l~~~~~~~i~~~i~~ 380 (593)
.+..++||||+++|+|.+++... ...+++..+..++.|++.
T Consensus 100 ~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~ 179 (345)
T 3hko_A 100 EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFS 179 (345)
T ss_dssp SSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHH
Confidence 99999999999999999998521 112457788899999999
Q ss_pred HHHHHHhcCCCCCeEecCCCCCCeeeCCCC--cEEEEeeccceecCCCCCc--cccccccCCccccCccccCC--CCCCc
Q 007680 381 ALEYLHNGHSSVHIIHCDLKPTNILLDENM--VAHVSDFGIYKLLGEGEDS--VRQTMTMATIGYMAPEYGLE--GIVSA 454 (593)
Q Consensus 381 ~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~--~~kL~Dfg~a~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~--~~~s~ 454 (593)
||+|||+++ |+||||||+||+++.++ .+||+|||++..+...... .......||+.|+|||++.+ ..++.
T Consensus 180 ~l~~LH~~~----ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~ 255 (345)
T 3hko_A 180 ALHYLHNQG----ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGP 255 (345)
T ss_dssp HHHHHHHTT----EECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCT
T ss_pred HHHHHHHCC----ccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCc
Confidence 999999654 99999999999998776 8999999999876432221 12344569999999999865 67899
Q ss_pred cchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCC
Q 007680 455 KCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESP 534 (593)
Q Consensus 455 ~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP 534 (593)
++|||||||++|||++|+.||......+ ......... ... ..+....+++++.+++.+||+.||
T Consensus 256 ~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~~~~~~------------~~~---~~~~~~~~~~~~~~li~~~l~~~p 319 (345)
T 3hko_A 256 KCDAWSAGVLLHLLLMGAVPFPGVNDAD-TISQVLNKK------------LCF---ENPNYNVLSPLARDLLSNLLNRNV 319 (345)
T ss_dssp HHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHCC------------CCT---TSGGGGGSCHHHHHHHHHHSCSCT
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCChHH-HHHHHHhcc------------ccc---CCcccccCCHHHHHHHHHHcCCCh
Confidence 9999999999999999999997643221 111111110 000 001112345688999999999999
Q ss_pred CCCCCHHHHHHH
Q 007680 535 DMRINMTDAAAK 546 (593)
Q Consensus 535 ~~RPs~~evl~~ 546 (593)
++|||+.|+++|
T Consensus 320 ~~Rps~~~~l~h 331 (345)
T 3hko_A 320 DERFDAMRALQH 331 (345)
T ss_dssp TTSCCHHHHHHS
T ss_pred hHCCCHHHHhcC
Confidence 999999999986
No 122
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=3.6e-42 Score=355.39 Aligned_cols=250 Identities=21% Similarity=0.231 Sum_probs=205.4
Q ss_pred hhhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhh---HHHHHHHHHHHHHHhhc-CCCCcceeeeeeecCCceE
Q 007680 270 ATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQL---ERAFRSFDSECEVLRNV-RHRNLIKILSSYSNPDFKA 344 (593)
Q Consensus 270 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 344 (593)
..++|++.+.||+|+||.||+|+.+ +|+.||+|+++... ....+.+..|..++..+ +||||+++++++.+.+..|
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 4578999999999999999999976 58899999998753 23456788899999988 8999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecC
Q 007680 345 LVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424 (593)
Q Consensus 345 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~ 424 (593)
+||||++||+|.+++...+. +++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++...
T Consensus 98 lv~E~~~gg~L~~~l~~~~~-~~~~~~~~~~~qi~~aL~~LH~~g----ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 172 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQVGR-FKEPHAVFYAAEIAIGLFFLQSKG----IIYRDLKLDNVMLDSEGHIKIADFGMCKENI 172 (353)
T ss_dssp EEEECCCSCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHTT----CBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EEEeCCCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCC----EEeccCCHHHEEEcCCCcEEEEeCCcccccc
Confidence 99999999999999987654 999999999999999999999654 9999999999999999999999999998643
Q ss_pred CCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhhhh
Q 007680 425 EGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDAN 504 (593)
Q Consensus 425 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 504 (593)
.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+... .
T Consensus 173 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~--~~~~~i~~~-----------~ 237 (353)
T 2i0e_A 173 WDGV--TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED--ELFQSIMEH-----------N 237 (353)
T ss_dssp CTTC--CBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHC-----------C
T ss_pred cCCc--ccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHH--HHHHHHHhC-----------C
Confidence 2221 234457999999999999999999999999999999999999999763211 111111110 0
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCC-----HHHHHHH
Q 007680 505 LVREEQAFSAKMDCILSIMDFALDCCMESPDMRIN-----MTDAAAK 546 (593)
Q Consensus 505 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~ 546 (593)
. ..+..++.++.+++.+||..||++||+ ++|+++|
T Consensus 238 ~-------~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h 277 (353)
T 2i0e_A 238 V-------AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 277 (353)
T ss_dssp C-------CCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred C-------CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 0 011134567899999999999999995 5777765
No 123
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.2e-42 Score=355.19 Aligned_cols=243 Identities=25% Similarity=0.341 Sum_probs=204.3
Q ss_pred hhhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhhH--------HHHHHHHHHHHHHhhcCCCCcceeeeeeecC
Q 007680 270 ATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLE--------RAFRSFDSECEVLRNVRHRNLIKILSSYSNP 340 (593)
Q Consensus 270 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 340 (593)
..++|++.+.||+|+||.||+|+.. +++.||||+++.... ...+.+.+|+.++++++||||+++++++.+.
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 4678999999999999999999964 789999999976531 1234577899999999999999999999999
Q ss_pred CceEEEEeccCCC-CHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeecc
Q 007680 341 DFKALVLEFMPNG-SLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGI 419 (593)
Q Consensus 341 ~~~~lv~e~~~~g-sL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 419 (593)
+..++||||+.+| +|.+++..... +++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~~~-l~~~~~~~i~~qi~~~L~~LH~~~----ivH~Dlkp~NIll~~~~~~kL~Dfg~ 176 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRHPR-LDEPLASYIFRQLVSAVGYLRLKD----IIHRDIKDENIVIAEDFTIKLIDFGS 176 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTCCC-CCHHHHHHHHHHHHHHHHHHHHTT----EECSCCSGGGEEECTTSCEEECCCTT
T ss_pred CEEEEEEEeCCCCccHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhCC----eEEeccCHHHEEEcCCCcEEEeeccc
Confidence 9999999999776 99999987654 999999999999999999999654 99999999999999999999999999
Q ss_pred ceecCCCCCccccccccCCccccCccccCCCCC-CccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchh
Q 007680 420 YKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIV-SAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLT 498 (593)
Q Consensus 420 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 498 (593)
+........ .....||+.|+|||++.+..+ +.++|||||||++|||++|+.||......
T Consensus 177 a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~----------------- 236 (335)
T 3dls_A 177 AAYLERGKL---FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET----------------- 236 (335)
T ss_dssp CEECCTTCC---BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG-----------------
T ss_pred ceECCCCCc---eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH-----------------
Confidence 987754432 233568999999999888776 88999999999999999999999762110
Q ss_pred hhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 499 EVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
..... ..+..+++++.+++.+||+.||++|||+.|++++
T Consensus 237 --~~~~~-------~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 237 --VEAAI-------HPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp --TTTCC-------CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred --Hhhcc-------CCCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000 0011235678999999999999999999999987
No 124
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=5.1e-42 Score=343.10 Aligned_cols=248 Identities=23% Similarity=0.323 Sum_probs=203.3
Q ss_pred hhhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhh---HHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEE
Q 007680 270 ATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKAL 345 (593)
Q Consensus 270 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 345 (593)
+.++|++.+.||+|+||.||+|... +++.||+|++.... ......+.+|+.++++++||||+++++++.+.+..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 86 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL 86 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence 3578999999999999999999876 67899999997653 2234678899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCC
Q 007680 346 VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGE 425 (593)
Q Consensus 346 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~ 425 (593)
||||+++++|.+++..... +++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++.....
T Consensus 87 v~e~~~~~~l~~~l~~~~~-~~~~~~~~~~~qi~~~l~~LH~~----~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~ 161 (279)
T 3fdn_A 87 ILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSK----RVIHRDIKPENLLLGSAGELKIADFGWSVHAPS 161 (279)
T ss_dssp EECCCTTEEHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHTT----TCEECCCCGGGEEECTTSCEEECSCCEESCC--
T ss_pred EEecCCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhC----CEecccCChHhEEEcCCCCEEEEeccccccCCc
Confidence 9999999999999987654 89999999999999999999954 599999999999999999999999998865433
Q ss_pred CCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhhhhh
Q 007680 426 GEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANL 505 (593)
Q Consensus 426 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 505 (593)
.. .....+++.|+|||++.+..++.++||||||+++|+|++|+.||...... .....+....
T Consensus 162 ~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~~~------------ 223 (279)
T 3fdn_A 162 SR----RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ--ETYKRISRVE------------ 223 (279)
T ss_dssp ----------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHHHHHTC------------
T ss_pred cc----ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHH--HHHHHHHhCC------------
Confidence 22 23456899999999999999999999999999999999999999763211 1111111100
Q ss_pred hhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 506 VREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 506 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
...+..++..+.+++.+||+.||++|||+.|+++|
T Consensus 224 ------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 224 ------FTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp ------CCCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred ------CCCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 00111235578999999999999999999999987
No 125
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=9.3e-42 Score=348.49 Aligned_cols=253 Identities=22% Similarity=0.280 Sum_probs=207.9
Q ss_pred hhhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhhHH------HHHHHHHHHHHHhhcCCCCcceeeeeeecCCc
Q 007680 270 ATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLER------AFRSFDSECEVLRNVRHRNLIKILSSYSNPDF 342 (593)
Q Consensus 270 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 342 (593)
..++|++.+.||+|+||.||+|+.. +|+.||+|+++..... ..+.+.+|+.++++++||||+++++++.+.+.
T Consensus 10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 89 (321)
T 2a2a_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTD 89 (321)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred hhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCE
Confidence 3578999999999999999999976 6899999999764321 35678999999999999999999999999999
Q ss_pred eEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCC----cEEEEeec
Q 007680 343 KALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENM----VAHVSDFG 418 (593)
Q Consensus 343 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~----~~kL~Dfg 418 (593)
.++||||+++++|.+++.... .+++..+..++.|++.||+|||+++ |+||||||+||+++.++ .+||+|||
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH~~~----ivH~dikp~NIl~~~~~~~~~~~kl~Dfg 164 (321)
T 2a2a_A 90 VVLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNYLHTKK----IAHFDLKPENIMLLDKNIPIPHIKLIDFG 164 (321)
T ss_dssp EEEEECCCCSCBHHHHHHTCS-CEEHHHHHHHHHHHHHHHHHHHHTT----EECCCCSGGGEEESCTTSSSCCEEECCCT
T ss_pred EEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCC----eecCCCChHHEEEecCCCCcCCEEEccCc
Confidence 999999999999999998754 4899999999999999999999654 99999999999999888 79999999
Q ss_pred cceecCCCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchh
Q 007680 419 IYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLT 498 (593)
Q Consensus 419 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 498 (593)
++........ .....||+.|+|||++.+..++.++||||||+++|+|++|+.||...... .....+...... .
T Consensus 165 ~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~i~~~~~~-~- 237 (321)
T 2a2a_A 165 LAHEIEDGVE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ--ETLANITSVSYD-F- 237 (321)
T ss_dssp TCEECCTTCC---CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH--HHHHHHHTTCCC-C-
T ss_pred cceecCcccc---ccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHH--HHHHHHHhcccc-c-
Confidence 9987654322 23456899999999999999999999999999999999999999763211 111111111000 0
Q ss_pred hhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 499 EVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
.......++..+.+++.+||+.||++|||+.|+++|
T Consensus 238 ------------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 238 ------------DEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp ------------CHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred ------------ChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 001112345678999999999999999999999986
No 126
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=7.2e-42 Score=365.98 Aligned_cols=248 Identities=25% Similarity=0.408 Sum_probs=206.9
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhhH---HHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEE
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLE---RAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALV 346 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 346 (593)
.++|.+.+.||+|+||.||+|++. +|+.||||+++.... .....+.+|+.+++.++||||+++++++...+..++|
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv 94 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV 94 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 467999999999999999999976 799999999986532 2346789999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCCC
Q 007680 347 LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEG 426 (593)
Q Consensus 347 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~ 426 (593)
|||+++|+|.+++...+ .+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++......
T Consensus 95 ~E~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~----givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~ 169 (476)
T 2y94_A 95 MEYVSGGELFDYICKNG-RLDEKESRRLFQQILSGVDYCHRH----MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG 169 (476)
T ss_dssp EECCSSEEHHHHTTSSS-SCCHHHHHHHHHHHHHHHHHHHTT----TEECSCCSGGGEEECTTCCEEECCCSSCEECCTT
T ss_pred EeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC----CCCcccccHHHEEEecCCCeEEEeccchhhcccc
Confidence 99999999999998655 499999999999999999999954 5999999999999999999999999999876543
Q ss_pred CCccccccccCCccccCccccCCCCC-CccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhhhhh
Q 007680 427 EDSVRQTMTMATIGYMAPEYGLEGIV-SAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANL 505 (593)
Q Consensus 427 ~~~~~~~~~~gt~~y~aPE~~~~~~~-s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 505 (593)
. ......||+.|+|||++.+..+ +.++||||+||++|||++|+.||.+.... .....+....
T Consensus 170 ~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~--~~~~~i~~~~------------ 232 (476)
T 2y94_A 170 E---FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP--TLFKKICDGI------------ 232 (476)
T ss_dssp C---CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSH--HHHHHHHTTC------------
T ss_pred c---cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHH--HHHHHHhcCC------------
Confidence 2 2234579999999999888765 78999999999999999999999763211 1111111110
Q ss_pred hhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 506 VREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 506 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
...+..+++++.+++.+||+.||++|||+.|+++|
T Consensus 233 ------~~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 233 ------FYTPQYLNPSVISLLKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp ------CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred ------cCCCccCCHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence 00111235578999999999999999999999986
No 127
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=3.8e-42 Score=343.24 Aligned_cols=247 Identities=24% Similarity=0.373 Sum_probs=183.1
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhh---HHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEE
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALV 346 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 346 (593)
.++|++.+.||+|+||.||+|++. +++.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 12 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (275)
T 2eue_A 12 IGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp CCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEE
T ss_pred ccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEE
Confidence 367999999999999999999864 78999999997542 23356788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCCC
Q 007680 347 LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEG 426 (593)
Q Consensus 347 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~ 426 (593)
|||+ +++|.+++..... +++.++..++.|++.||+|||+++ |+||||||+||++++++.+||+|||++......
T Consensus 92 ~e~~-~~~l~~~~~~~~~-~~~~~~~~~~~~i~~~l~~LH~~~----i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 165 (275)
T 2eue_A 92 IEYA-GNELFDYIVQRDK-MSEQEARRFFQQIISAVEYCHRHK----IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG 165 (275)
T ss_dssp EECC-CEEHHHHHHTSSS-CCHHHHHHHHHHHHHHHHHHHHTT----CCCCCCSGGGEEECTTSCEEECCSSCC------
T ss_pred ehhc-CCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCC----CeeccCChHhEEECCCCCEEEeecccceeccCc
Confidence 9999 7789888877654 999999999999999999999655 999999999999999999999999999866443
Q ss_pred CCccccccccCCccccCccccCCCCC-CccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhhhhh
Q 007680 427 EDSVRQTMTMATIGYMAPEYGLEGIV-SAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANL 505 (593)
Q Consensus 427 ~~~~~~~~~~gt~~y~aPE~~~~~~~-s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 505 (593)
.. .....||+.|+|||++.+..+ +.++||||||+++|||++|+.||...... ...........
T Consensus 166 ~~---~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~~~~~----------- 229 (275)
T 2eue_A 166 NF---LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP--VLFKNISNGVY----------- 229 (275)
T ss_dssp ------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHTCC-----------
T ss_pred cc---ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhCCC-----------
Confidence 21 233468999999999887765 78999999999999999999999763211 11111111100
Q ss_pred hhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 506 VREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 506 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
..+..+++.+.+++.+||+.||++|||+.|+++|
T Consensus 230 -------~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 263 (275)
T 2eue_A 230 -------TLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp -------CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred -------CCCccCCHHHHHHHHHHhhcCHhHCCCHHHHhhC
Confidence 0111235678999999999999999999999876
No 128
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=6.2e-42 Score=359.10 Aligned_cols=251 Identities=23% Similarity=0.324 Sum_probs=198.2
Q ss_pred hccccccccCccCcccEEEEEeCCCCeEEEEEeehhh--HHHHHHHHHHHHHHhhcC--CCCcceeeeeeecCCceEEEE
Q 007680 272 DEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQL--ERAFRSFDSECEVLRNVR--HRNLIKILSSYSNPDFKALVL 347 (593)
Q Consensus 272 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~lv~ 347 (593)
++|++.+.||+|+||.||+|...+++.||||++.... ....+.+.+|+.++.+++ ||||+++++++...+..++||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 4699999999999999999998889999999997542 445678999999999996 599999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCCCC
Q 007680 348 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGE 427 (593)
Q Consensus 348 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~ 427 (593)
| +.+++|.+++.... .+++.++..++.||+.||+|||++ +|+||||||+|||++ ++.+||+|||+++.+....
T Consensus 136 E-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH~~----~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~ 208 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQH----GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 208 (390)
T ss_dssp E-CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHHTT----TCCCCCCCGGGEEES-SSCEEECCCSSSCCC----
T ss_pred e-cCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC----CeeecCCCHHHEEEE-CCeEEEEecCccccccCCC
Confidence 9 56889999998766 489999999999999999999954 599999999999995 5799999999998775443
Q ss_pred CccccccccCCccccCccccCC-----------CCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCc
Q 007680 428 DSVRQTMTMATIGYMAPEYGLE-----------GIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHG 496 (593)
Q Consensus 428 ~~~~~~~~~gt~~y~aPE~~~~-----------~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 496 (593)
.........||+.|+|||++.+ ..++.++|||||||++|||++|+.||.........+...
T Consensus 209 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~-------- 280 (390)
T 2zmd_A 209 TSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI-------- 280 (390)
T ss_dssp -----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHH--------
T ss_pred ccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHH--------
Confidence 3323344579999999998764 468999999999999999999999997632211111111
Q ss_pred hhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 497 LTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
++..... ..+...+.++.+++.+||+.||++|||+.|+++|
T Consensus 281 ----~~~~~~~-----~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 281 ----IDPNHEI-----EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp ----HCTTSCC-----CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ----hCccccC-----CCCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 1111000 0011123578999999999999999999999987
No 129
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=1.6e-41 Score=344.90 Aligned_cols=265 Identities=22% Similarity=0.295 Sum_probs=203.2
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehh---hHHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEE
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQ---LERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALV 346 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 346 (593)
.++|++.+.||+|+||.||+|... +|+.||+|+++.. .......+.+|+.++++++||||+++++++...+..++|
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 110 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 110 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence 467999999999999999999964 7899999999753 244567789999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceec
Q 007680 347 LEFMPNGSLEKWLYS---HNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLL 423 (593)
Q Consensus 347 ~e~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~ 423 (593)
|||+++++|.+++.. ....+++..+..++.|++.||+|||+++ ++||||||+||+++.++.+||+|||++...
T Consensus 111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~----i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~ 186 (310)
T 2wqm_A 111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR----VMHRDIKPANVFITATGVVKLGDLGLGRFF 186 (310)
T ss_dssp EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT----CCCCCCCGGGEEECTTSCEEECCC------
T ss_pred EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCC----eeCCCCcHHHEEEcCCCCEEEEeccceeee
Confidence 999999999999865 3345899999999999999999999654 999999999999999999999999998866
Q ss_pred CCCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhhh
Q 007680 424 GEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDA 503 (593)
Q Consensus 424 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 503 (593)
..... ......+++.|+|||++.+..++.++||||||+++|+|++|+.||.............+......
T Consensus 187 ~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-------- 256 (310)
T 2wqm_A 187 SSKTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYP-------- 256 (310)
T ss_dssp --------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTCSC--------
T ss_pred cCCCc--cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcccCC--------
Confidence 43322 12334689999999999999999999999999999999999999976322221221111111000
Q ss_pred hhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhhhcch
Q 007680 504 NLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVKFLDD 557 (593)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 557 (593)
......++.++.+++.+||+.||++|||+.++++.|+++++...+.
T Consensus 257 --------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~~ 302 (310)
T 2wqm_A 257 --------PLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTASS 302 (310)
T ss_dssp --------CCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC--
T ss_pred --------CCcccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhhh
Confidence 0001234567899999999999999999999999999998876443
No 130
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=5.7e-42 Score=350.61 Aligned_cols=254 Identities=21% Similarity=0.281 Sum_probs=184.1
Q ss_pred hccccc---cccCccCcccEEEEEeC-CCCeEEEEEeehhhHHHHHHHHHHHHHHhhcC-CCCcceeeeeeecCCceEEE
Q 007680 272 DEFNEC---NLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLERAFRSFDSECEVLRNVR-HRNLIKILSSYSNPDFKALV 346 (593)
Q Consensus 272 ~~~~~~---~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv 346 (593)
++|++. +.||+|+||.||+|.+. +++.||||++.... ...+.+|+.+++.+. ||||+++++++.+.+..++|
T Consensus 8 ~~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv 84 (325)
T 3kn6_A 8 QHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRM---EANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLV 84 (325)
T ss_dssp HHEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGGG---HHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChhh---hhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEE
Confidence 455554 78999999999999975 68999999997653 356778999999997 99999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCC---cEEEEeeccceec
Q 007680 347 LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENM---VAHVSDFGIYKLL 423 (593)
Q Consensus 347 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~---~~kL~Dfg~a~~~ 423 (593)
|||+++|+|.+++..... +++.++..++.|++.||+|||+++ |+||||||+||+++.++ .+||+|||+++..
T Consensus 85 ~e~~~~~~L~~~l~~~~~-~~~~~~~~i~~qi~~~l~~LH~~~----ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~ 159 (325)
T 3kn6_A 85 MELLNGGELFERIKKKKH-FSETEASYIMRKLVSAVSHMHDVG----VVHRDLKPENLLFTDENDNLEIKIIDFGFARLK 159 (325)
T ss_dssp ECCCCSCBHHHHHHHCSC-CCHHHHHHHHHHHHHHHHHHHHTT----EECCCCCGGGEEEEC----CEEEECCCTTCEEC
T ss_pred EEccCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCC----CeecCCCHHHEEEecCCCcccEEEeccccceec
Confidence 999999999999987654 999999999999999999999654 99999999999998765 8999999999876
Q ss_pred CCCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCcccccc--chHHHHHHHhcCCchhhhh
Q 007680 424 GEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGE--MSLRRWVKESLPHGLTEVV 501 (593)
Q Consensus 424 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~ 501 (593)
..... ......+|+.|+|||++.+..++.++|||||||++|+|++|+.||....... ...........
T Consensus 160 ~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~-------- 229 (325)
T 3kn6_A 160 PPDNQ--PLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIK-------- 229 (325)
T ss_dssp CC------------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHT--------
T ss_pred CCCCC--cccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHH--------
Confidence 54322 2234568999999999999999999999999999999999999997642211 01111111100
Q ss_pred hhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 502 DANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
.... ....+....+++++.+++.+||+.||++|||++|+++|
T Consensus 230 ~~~~---~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 230 KGDF---SFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp TTCC---CCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred cCCC---CCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence 0000 00111123356788999999999999999999999865
No 131
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=3.2e-42 Score=372.33 Aligned_cols=259 Identities=23% Similarity=0.366 Sum_probs=214.5
Q ss_pred HhhhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhhHHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEEE
Q 007680 269 RATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVL 347 (593)
Q Consensus 269 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 347 (593)
...++|++.+.||+|+||.||+|.++ ++..||||+++... ...+.+.+|+.++++++||||+++++++...+..++||
T Consensus 217 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 295 (495)
T 1opk_A 217 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 295 (495)
T ss_dssp CCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred cCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEE
Confidence 34678999999999999999999976 48899999997653 23567899999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCCC
Q 007680 348 EFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEG 426 (593)
Q Consensus 348 e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~ 426 (593)
||+++|+|.+++.... ..+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 296 E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~----ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 371 (495)
T 1opk_A 296 EFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN----FIHRNLAARNCLVGENHLVKVADFGLSRLMTGD 371 (495)
T ss_dssp ECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTT----EECSCCSGGGEEECGGGCEEECCTTCEECCTTC
T ss_pred EccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC----cccCCCChhhEEECCCCcEEEeecccceeccCC
Confidence 9999999999998744 35899999999999999999999654 999999999999999999999999999876543
Q ss_pred CCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccchHHHHHHHhcCCchhhhhhhhh
Q 007680 427 EDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANL 505 (593)
Q Consensus 427 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 505 (593)
.. .......++..|+|||++.+..++.++|||||||++|||+| |..||...... .....+....
T Consensus 372 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~--~~~~~~~~~~------------ 436 (495)
T 1opk_A 372 TY-TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLEKDY------------ 436 (495)
T ss_dssp CE-ECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHHHHHHTTC------------
T ss_pred ce-eecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCC------------
Confidence 21 12233446788999999988899999999999999999999 99999764322 1122211111
Q ss_pred hhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhh
Q 007680 506 VREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKV 552 (593)
Q Consensus 506 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 552 (593)
....+..++.++.+++.+||+.||++|||+.++++.|+.+..
T Consensus 437 -----~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~ 478 (495)
T 1opk_A 437 -----RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 478 (495)
T ss_dssp -----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred -----CCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHh
Confidence 111123456788999999999999999999999999998753
No 132
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=3.3e-41 Score=347.31 Aligned_cols=276 Identities=21% Similarity=0.320 Sum_probs=214.2
Q ss_pred HHHHHhhhccccccccCccCcccEEEEEeCCCCeEEEEEeehhhHHHHHHHHHHHHHHhh--cCCCCcceeeeeeecCC-
Q 007680 265 LDIQRATDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRN--VRHRNLIKILSSYSNPD- 341 (593)
Q Consensus 265 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~- 341 (593)
.......++|++.+.||+|+||.||+|++ +|+.||+|+++... ...+.+|.+++.. ++||||+++++++...+
T Consensus 35 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~ 110 (342)
T 1b6c_B 35 LVQRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNG 110 (342)
T ss_dssp HHHHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCS
T ss_pred eecccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCchh---HHHHHHHHHHHHHhhcCCCcEEEEEeeecccCC
Confidence 33455678999999999999999999998 58999999997553 3467788888887 68999999999998876
Q ss_pred ---ceEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcC----CCCCeEecCCCCCCeeeCCCCcEEE
Q 007680 342 ---FKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGH----SSVHIIHCDLKPTNILLDENMVAHV 414 (593)
Q Consensus 342 ---~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~----~~~~ivH~Dlkp~NIll~~~~~~kL 414 (593)
..++||||+++|+|.+++.... +++.++..++.|++.||+|||... .+.+|+||||||+||+++.++.+||
T Consensus 111 ~~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL 188 (342)
T 1b6c_B 111 TWTQLWLVSDYHEHGSLFDYLNRYT--VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCI 188 (342)
T ss_dssp SCCCEEEEECCCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEE
T ss_pred ccceeEEEEeecCCCcHHHHHhccC--ccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEE
Confidence 7899999999999999998754 899999999999999999999210 0235999999999999999999999
Q ss_pred EeeccceecCCCCCcc--ccccccCCccccCccccCCC------CCCccchHHHHHHHHHHHHhC----------CCCCC
Q 007680 415 SDFGIYKLLGEGEDSV--RQTMTMATIGYMAPEYGLEG------IVSAKCDVYSYGVLLMETFTR----------KRPTD 476 (593)
Q Consensus 415 ~Dfg~a~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~s~~~DvwSlGvvl~elltg----------~~pf~ 476 (593)
+|||++.......... ......||+.|+|||++.+. .++.++|||||||++|||+|| ..||.
T Consensus 189 ~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~ 268 (342)
T 1b6c_B 189 ADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYY 268 (342)
T ss_dssp CCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTT
T ss_pred EECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCcc
Confidence 9999998765543221 22345699999999998765 234789999999999999999 77886
Q ss_pred ccccccchHHHHHHHhcCCchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhhh
Q 007680 477 EMFIGEMSLRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVKF 554 (593)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 554 (593)
...........+.......... ..........+++..+.+++.+||+.||++|||+.|++++|+++....
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~ 338 (342)
T 1b6c_B 269 DLVPSDPSVEEMRKVVCEQKLR--------PNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 338 (342)
T ss_dssp TTSCSSCCHHHHHHHHTTSCCC--------CCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred ccCcCcccHHHHHHHHHHHHhC--------CCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHh
Confidence 6543333332222211111100 000001112345678999999999999999999999999999987653
No 133
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=2.1e-41 Score=341.32 Aligned_cols=274 Identities=18% Similarity=0.218 Sum_probs=216.3
Q ss_pred hhccccccccCccCcccEEEEEe-CCCCeEEEEEeehhhHHHHHHHHHHHHHHhhcCCCCcceeeeee-ecCCceEEEEe
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTI-SDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSY-SNPDFKALVLE 348 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~lv~e 348 (593)
.++|++.+.||+|+||.||+|+. .+|+.||+|++..... .+.+.+|+.+++.++|++++..+.++ ...+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence 56899999999999999999996 4799999999875432 24688999999999988877666655 56678899999
Q ss_pred ccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeC---CCCcEEEEeeccceecCC
Q 007680 349 FMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLD---ENMVAHVSDFGIYKLLGE 425 (593)
Q Consensus 349 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~---~~~~~kL~Dfg~a~~~~~ 425 (593)
|+ +++|.+++......+++.++..++.|++.||+|||+++ |+||||||+||+++ .++.+||+|||++.....
T Consensus 86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~----ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~ 160 (296)
T 3uzp_A 86 LL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKN----FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT----EECSCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred ec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCC----eeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccc
Confidence 99 89999999866667999999999999999999999655 99999999999994 888999999999988765
Q ss_pred CCCcc-----ccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCcccccc--chHHHHHHHhcCCchh
Q 007680 426 GEDSV-----RQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGE--MSLRRWVKESLPHGLT 498 (593)
Q Consensus 426 ~~~~~-----~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~--~~~~~~~~~~~~~~~~ 498 (593)
..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ..+......
T Consensus 161 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~------- 233 (296)
T 3uzp_A 161 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEK------- 233 (296)
T ss_dssp TTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHH-------
T ss_pred cccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhccc-------
Confidence 43211 1234579999999999999999999999999999999999999998642211 111111110
Q ss_pred hhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhhhcc-hhhccCCcc
Q 007680 499 EVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVKFLD-DAAATNWRN 565 (593)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~-~~~~~~~~~ 565 (593)
..... .......+++++.+++.+||+.||++|||+.++++.|+++...... .....+|+.
T Consensus 234 -----~~~~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~~~~~~~dw~~ 294 (296)
T 3uzp_A 234 -----KMSTP--IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNM 294 (296)
T ss_dssp -----HHHSC--HHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTCCSSCCCGGGG
T ss_pred -----ccCCc--hHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCCcccccccccc
Confidence 00000 0011123467899999999999999999999999999999877533 344566764
No 134
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=1.1e-41 Score=347.07 Aligned_cols=263 Identities=21% Similarity=0.224 Sum_probs=209.2
Q ss_pred hhccccccccCccCcccEEEEEe-CCCCeEEEEEeehhhHHHHHHHHHHHHHHhhcCCCCcceeeeeee----cCCceEE
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTI-SDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYS----NPDFKAL 345 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~----~~~~~~l 345 (593)
.++|++.+.||+|+||.||+++. .+++.||+|++........+.+.+|++++++++||||+++++++. .....++
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 107 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL 107 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence 46899999999999999999997 479999999997766666778999999999999999999999986 3347899
Q ss_pred EEeccCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeecccee
Q 007680 346 VLEFMPNGSLEKWLYS---HNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKL 422 (593)
Q Consensus 346 v~e~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~ 422 (593)
||||+++|+|.+++.. ....+++.++..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||.+..
T Consensus 108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~----ivH~dlkp~NIl~~~~~~~kl~dfg~~~~ 183 (317)
T 2buj_A 108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG----YAHRDLKPTNILLGDEGQPVLMDLGSMNQ 183 (317)
T ss_dssp EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT----EECCCCCGGGEEECTTSCEEECCCSSCEE
T ss_pred EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC----cccCCCCHHHEEEcCCCCEEEEecCcchh
Confidence 9999999999999876 3446999999999999999999999654 99999999999999999999999999876
Q ss_pred cCCCCCcc-------ccccccCCccccCccccCCCC---CCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHh
Q 007680 423 LGEGEDSV-------RQTMTMATIGYMAPEYGLEGI---VSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKES 492 (593)
Q Consensus 423 ~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~---~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~ 492 (593)
........ ......||+.|+|||++.+.. ++.++||||||+++|||++|+.||.................
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~ 263 (317)
T 2buj_A 184 ACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQ 263 (317)
T ss_dssp SCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHCC
T ss_pred cccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhcc
Confidence 54221110 112235799999999987654 78999999999999999999999965322222211111110
Q ss_pred cCCchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhhh
Q 007680 493 LPHGLTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVKF 554 (593)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 554 (593)
...+....++.++.+++.+||+.||++|||+.|++++|+.+....
T Consensus 264 -----------------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~ 308 (317)
T 2buj_A 264 -----------------LSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPA 308 (317)
T ss_dssp -------------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCC
T ss_pred -----------------CCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCC
Confidence 001111234567899999999999999999999999999986543
No 135
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=2e-41 Score=339.16 Aligned_cols=260 Identities=20% Similarity=0.318 Sum_probs=208.6
Q ss_pred hhhccccccccCccCcccEEEEEeCC----CCeEEEEEeehh-hHHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceE
Q 007680 270 ATDEFNECNLLGTSSFGSVYKGTISD----GTDVAIKVFNLQ-LERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKA 344 (593)
Q Consensus 270 ~~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 344 (593)
..++|++.+.||+|+||.||+|++.+ +..||+|+++.. .....+.+.+|+.++++++||||+++++++.++ ..+
T Consensus 10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~ 88 (281)
T 3cc6_A 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PTW 88 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SCE
T ss_pred cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CCE
Confidence 35789999999999999999998542 345999999765 234557899999999999999999999998654 568
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecC
Q 007680 345 LVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424 (593)
Q Consensus 345 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~ 424 (593)
+||||+++++|.+++......+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++....
T Consensus 89 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~----i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 164 (281)
T 3cc6_A 89 IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESIN----CVHRDIAVRNILVASPECVKLGDFGLSRYIE 164 (281)
T ss_dssp EEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTT----CCCCCCSGGGEEEEETTEEEECCCCGGGCC-
T ss_pred EEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCC----cccCCCccceEEECCCCcEEeCccCCCcccc
Confidence 999999999999999877667999999999999999999999655 9999999999999999999999999998765
Q ss_pred CCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccchHHHHHHHhcCCchhhhhhh
Q 007680 425 EGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDA 503 (593)
Q Consensus 425 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 503 (593)
.... .......+++.|+|||++.+..++.++||||||+++|||++ |+.||...... .....+.....
T Consensus 165 ~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~--~~~~~~~~~~~--------- 232 (281)
T 3cc6_A 165 DEDY-YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK--DVIGVLEKGDR--------- 232 (281)
T ss_dssp ---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGG--GHHHHHHHTCC---------
T ss_pred cccc-cccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChH--HHHHHHhcCCC---------
Confidence 4322 12233457889999999988899999999999999999998 99999753222 11121111110
Q ss_pred hhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhhh
Q 007680 504 NLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVKF 554 (593)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 554 (593)
...+..+++.+.+++.+||+.||++|||+.|++++|+++...-
T Consensus 233 --------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~ 275 (281)
T 3cc6_A 233 --------LPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQME 275 (281)
T ss_dssp --------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred --------CCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHhh
Confidence 0111224567899999999999999999999999999987654
No 136
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.5e-41 Score=345.20 Aligned_cols=267 Identities=21% Similarity=0.236 Sum_probs=201.9
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhh--HHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEEE
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVL 347 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 347 (593)
.++|++.+.||+|+||.||+|++. +|+.||+|++.... ....+.+.+|++++++++||||+++++++...+..++||
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVF 81 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEE
Confidence 367999999999999999999976 68999999986542 334567889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCCCC
Q 007680 348 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGE 427 (593)
Q Consensus 348 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~ 427 (593)
||+++++|.+++..... +++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||.+.......
T Consensus 82 e~~~~~~l~~~~~~~~~-~~~~~~~~i~~~l~~~l~~lH~~~----ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 156 (311)
T 4agu_A 82 EYCDHTVLHELDRYQRG-VPEHLVKSITWQTLQAVNFCHKHN----CIHRDVKPENILITKHSVIKLCDFGFARLLTGPS 156 (311)
T ss_dssp ECCSEEHHHHHHHTSSC-CCHHHHHHHHHHHHHHHHHHHHTT----EECCCCSGGGEEECTTSCEEECCCTTCEECC---
T ss_pred EeCCCchHHHHHhhhcC-CCHHHHHHHHHHHHHHHHHHHHCC----CcCCCCChhhEEEcCCCCEEEeeCCCchhccCcc
Confidence 99999999998876554 999999999999999999999654 9999999999999999999999999998765433
Q ss_pred CccccccccCCccccCccccCC-CCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCc---hhhhhhh
Q 007680 428 DSVRQTMTMATIGYMAPEYGLE-GIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHG---LTEVVDA 503 (593)
Q Consensus 428 ~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 503 (593)
. ......+|+.|+|||++.+ ..++.++||||||+++|+|++|+.||......+ ....+....... .......
T Consensus 157 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 232 (311)
T 4agu_A 157 D--YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVD--QLYLIRKTLGDLIPRHQQVFST 232 (311)
T ss_dssp -----------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHHHHHHHHCSCCHHHHHHHHT
T ss_pred c--ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHhccccccccccccc
Confidence 2 2234568999999998876 668999999999999999999999997643221 111111111110 0000000
Q ss_pred hhh------h----hhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 504 NLV------R----EEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 504 ~~~------~----~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
... . ..........++.++.+++.+||+.||++|||++|+++|
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 233 NQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp CGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred ccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 000 0 000001112356678999999999999999999999986
No 137
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=3.3e-42 Score=352.35 Aligned_cols=271 Identities=20% Similarity=0.282 Sum_probs=202.5
Q ss_pred hccccccccCccCcccEEEEEeC-CCCeEEEEEeehhhHH-HHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEEEec
Q 007680 272 DEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLER-AFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVLEF 349 (593)
Q Consensus 272 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 349 (593)
++|++.+.||+|+||.||+|+.. +++.||+|+++..... ....+.+|++++++++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 57999999999999999999976 7899999999754322 222455799999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCCCCCc
Q 007680 350 MPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDS 429 (593)
Q Consensus 350 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~ 429 (593)
++ |+|.+++......+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++........
T Consensus 82 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~----ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~- 155 (324)
T 3mtl_A 82 LD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQK----VLHRDLKPQNLLINERGELKLADFGLARAKSIPTK- 155 (324)
T ss_dssp CS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT----EEESSCCGGGEEECTTCCEEECSSSEEECC------
T ss_pred cc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC----ccCCCcCHHHEEECCCCCEEEccCcccccccCCcc-
Confidence 96 5999999887777999999999999999999999654 99999999999999999999999999986543322
Q ss_pred cccccccCCccccCccccCC-CCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcC----Cchhhhhhhh
Q 007680 430 VRQTMTMATIGYMAPEYGLE-GIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLP----HGLTEVVDAN 504 (593)
Q Consensus 430 ~~~~~~~gt~~y~aPE~~~~-~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 504 (593)
......+|+.|+|||++.+ ..++.++|||||||++|||++|+.||......+ ....+..... ..+.......
T Consensus 156 -~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~ 232 (324)
T 3mtl_A 156 -TYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE--QLHFIFRILGTPTEETWPGILSNE 232 (324)
T ss_dssp --------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHHHHHHHHCCCCTTTSTTGGGCH
T ss_pred -ccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHhCCCChHhchhhhcch
Confidence 2233468999999998876 568999999999999999999999997743221 2222211111 1111111110
Q ss_pred hhh--------hhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH--HHHhh
Q 007680 505 LVR--------EEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK--LKKIK 551 (593)
Q Consensus 505 ~~~--------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~--L~~i~ 551 (593)
... ..........+++++.+++.+||+.||++|||++|+++| +.++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 289 (324)
T 3mtl_A 233 EFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLG 289 (324)
T ss_dssp HHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGC
T ss_pred hhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhcc
Confidence 000 000011122345678999999999999999999999986 44443
No 138
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=6.5e-42 Score=342.81 Aligned_cols=253 Identities=22% Similarity=0.346 Sum_probs=206.3
Q ss_pred hhhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhhHHHHHHHHHHHHHHhhcCCCCcceeeeeeec---------
Q 007680 270 ATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSN--------- 339 (593)
Q Consensus 270 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--------- 339 (593)
..++|++.+.||+|+||.||+|.+. +++.||+|+++... +.+.+|++++++++||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 84 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS 84 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence 4578999999999999999999976 79999999997653 346789999999999999999998854
Q ss_pred -------CCceEEEEeccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCc
Q 007680 340 -------PDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMV 411 (593)
Q Consensus 340 -------~~~~~lv~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~ 411 (593)
....++||||+++++|.+++.... ..+++..+..++.|++.||.|||+++ |+||||||+||+++.++.
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~----i~H~dlkp~Nil~~~~~~ 160 (284)
T 2a19_B 85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKK----LINRDLKPSNIFLVDTKQ 160 (284)
T ss_dssp ----CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTT----EECSCCSGGGEEEEETTE
T ss_pred ccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC----eeeccCCHHHEEEcCCCC
Confidence 345799999999999999997653 35899999999999999999999654 999999999999999999
Q ss_pred EEEEeeccceecCCCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHH
Q 007680 412 AHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKE 491 (593)
Q Consensus 412 ~kL~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~ 491 (593)
+||+|||++........ .....+++.|+|||++.+..++.++||||||+++|||++|..|+.... ........
T Consensus 161 ~kl~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~----~~~~~~~~ 233 (284)
T 2a19_B 161 VKIGDFGLVTSLKNDGK---RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS----KFFTDLRD 233 (284)
T ss_dssp EEECCCTTCEESSCCSC---CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH----HHHHHHHT
T ss_pred EEECcchhheecccccc---ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH----HHHHHhhc
Confidence 99999999987754432 233468999999999999999999999999999999999999874311 00000000
Q ss_pred hcCCchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhhhcch
Q 007680 492 SLPHGLTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVKFLDD 557 (593)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 557 (593)
..+ ...++..+.+++.+||+.||++|||+.|++++|+.++...+..
T Consensus 234 -----------~~~---------~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~~~ 279 (284)
T 2a19_B 234 -----------GII---------SDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEKN 279 (284)
T ss_dssp -----------TCC---------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC-----
T ss_pred -----------ccc---------cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCCcc
Confidence 000 0123456899999999999999999999999999987665443
No 139
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=1e-41 Score=346.03 Aligned_cols=268 Identities=24% Similarity=0.298 Sum_probs=201.1
Q ss_pred hhhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhh-----HHHHHHHHHHHHHHhhc---CCCCcceeeeeeecC
Q 007680 270 ATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQL-----ERAFRSFDSECEVLRNV---RHRNLIKILSSYSNP 340 (593)
Q Consensus 270 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~ 340 (593)
..++|++.+.||+|+||.||+|++. +++.||+|+++... ......+.+|+.+++++ +||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 4678999999999999999999964 78999999997432 11124566777777766 499999999999776
Q ss_pred C-----ceEEEEeccCCCCHHHHHhhCCC-CCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEE
Q 007680 341 D-----FKALVLEFMPNGSLEKWLYSHNY-FLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHV 414 (593)
Q Consensus 341 ~-----~~~lv~e~~~~gsL~~~l~~~~~-~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL 414 (593)
. ..++||||++ ++|.+++..... .+++.++..++.|++.||+|||+++ |+||||||+||+++.++.+||
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~----ivH~Dlkp~Nil~~~~~~~kl 161 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC----IVHRDLKPENILVTSGGTVKL 161 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTT----CCCSCCCTTTEEECTTSCEEE
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC----cccCCCCHHHEEEcCCCCEEE
Confidence 5 5799999996 599999987654 4899999999999999999999655 999999999999999999999
Q ss_pred EeeccceecCCCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHh-c
Q 007680 415 SDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKES-L 493 (593)
Q Consensus 415 ~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~-~ 493 (593)
+|||+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+ ......... .
T Consensus 162 ~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~~~ 237 (308)
T 3g33_A 162 ADFGLARIYSYQM---ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD-QLGKIFDLIGL 237 (308)
T ss_dssp CSCSCTTTSTTCC---CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHH-HHHHHHHHHCC
T ss_pred eeCccccccCCCc---ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCC
Confidence 9999998664332 2244568999999999999999999999999999999999999997643221 111111111 0
Q ss_pred CC-c-hhhhh---hhhhhhh--hhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 494 PH-G-LTEVV---DANLVRE--EQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 494 ~~-~-~~~~~---~~~~~~~--~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
+. . +.... ....... ........+++.++.+++.+||+.||++|||+.|+++|
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 238 PPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp CCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 00 0 00000 0000000 00011112345688999999999999999999999975
No 140
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.4e-41 Score=345.24 Aligned_cols=261 Identities=20% Similarity=0.244 Sum_probs=202.4
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhh---HHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEE
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALV 346 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 346 (593)
.++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.++++++||||+++++++...+..++|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 578999999999999999999975 78999999997653 23457789999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCCC
Q 007680 347 LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEG 426 (593)
Q Consensus 347 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~ 426 (593)
|||+++++|.+++..... +++.++..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++......
T Consensus 113 ~e~~~~~~L~~~l~~~~~-~~~~~~~~i~~qi~~~l~~lH~~~----i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 187 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQGP-LAPPRAVAIVRQIGSALDAAHAAG----ATHRDVKPENILVSADDFAYLVDFGIASATTDE 187 (309)
T ss_dssp EECCCCEEHHHHHHHHCS-CCHHHHHHHHHHHHHHHHHHHHTT----CCCSCCCGGGEEECTTSCEEECSCCC-------
T ss_pred EEecCCCCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCc----CCcCCCChHHEEEcCCCCEEEecCccCcccccc
Confidence 999999999999987654 899999999999999999999654 999999999999999999999999998866443
Q ss_pred CCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhhhhhh
Q 007680 427 EDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLV 506 (593)
Q Consensus 427 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (593)
.. .......+++.|+|||++.+..++.++||||||+++|||++|+.||...... ..........+.
T Consensus 188 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~~~~~~----------- 253 (309)
T 2h34_A 188 KL-TQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS--VMGAHINQAIPR----------- 253 (309)
T ss_dssp ----------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH--HHHHHHHSCCCC-----------
T ss_pred cc-ccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH--HHHHHhccCCCC-----------
Confidence 21 1223456899999999999999999999999999999999999999763211 111111111100
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhcccCCCCCCC-CHHHHHHHHHHhhhhh
Q 007680 507 REEQAFSAKMDCILSIMDFALDCCMESPDMRI-NMTDAAAKLKKIKVKF 554 (593)
Q Consensus 507 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~evl~~L~~i~~~~ 554 (593)
.......++.++.+++.+||+.||++|| +++++++.|++.....
T Consensus 254 ----~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~ 298 (309)
T 2h34_A 254 ----PSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATA 298 (309)
T ss_dssp ----GGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC--
T ss_pred ----ccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhh
Confidence 0011123456789999999999999999 9999999999876554
No 141
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=7.3e-42 Score=352.91 Aligned_cols=268 Identities=16% Similarity=0.161 Sum_probs=203.6
Q ss_pred hhccccccccCccCcccEEEEEeC----CCCeEEEEEeehhhHH-----------HHHHHHHHHHHHhhcCCCCcceeee
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS----DGTDVAIKVFNLQLER-----------AFRSFDSECEVLRNVRHRNLIKILS 335 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~niv~l~~ 335 (593)
.++|++.+.||+|+||.||+|... ++..||+|++...... ....+.+|+..+..++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 468999999999999999999975 5788999998754211 1234667889999999999999999
Q ss_pred eeec----CCceEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCC-
Q 007680 336 SYSN----PDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENM- 410 (593)
Q Consensus 336 ~~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~- 410 (593)
++.. ....++||||+ +++|.+++...+ .+++.++..++.|++.||+|||+++ |+||||||+||+++.++
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~----ivH~Dlkp~NIll~~~~~ 189 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNG-TFKKSTVLQLGIRMLDVLEYIHENE----YVHGDIKAANLLLGYKNP 189 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGGG-BCCHHHHHHHHHHHHHHHHHHHHTT----EECSCCSGGGEEEESSST
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCC----eeCCCcCHHHEEEccCCC
Confidence 9887 67899999999 999999998766 5999999999999999999999654 99999999999999887
Q ss_pred -cEEEEeeccceecCCCCCc-----cccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccch
Q 007680 411 -VAHVSDFGIYKLLGEGEDS-----VRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMS 484 (593)
Q Consensus 411 -~~kL~Dfg~a~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~ 484 (593)
.+||+|||+++.+...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.........
T Consensus 190 ~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~ 269 (345)
T 2v62_A 190 DQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVA 269 (345)
T ss_dssp TSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHH
T ss_pred CcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHH
Confidence 9999999999877543211 1123457999999999999999999999999999999999999999653222221
Q ss_pred HHHHHHHhcCCchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhh
Q 007680 485 LRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVK 553 (593)
Q Consensus 485 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 553 (593)
......... ......+. .......++.++.+++.+||+.||++|||+.++++.|+++...
T Consensus 270 ~~~~~~~~~-~~~~~~~~--------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~ 329 (345)
T 2v62_A 270 VQTAKTNLL-DELPQSVL--------KWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGIP 329 (345)
T ss_dssp HHHHHHHHH-HTTTHHHH--------HHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCCC
T ss_pred HHHHHHhhc-ccccHHHH--------hhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCCc
Confidence 111111100 00000000 0000113466899999999999999999999999999987543
No 142
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=7.6e-42 Score=343.06 Aligned_cols=251 Identities=26% Similarity=0.335 Sum_probs=198.8
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhh-HHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEEEe
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVLE 348 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 348 (593)
.++|.+.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 100 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVME 100 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEE
Confidence 468999999999999999999975 68999999998754 2345678999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhC---CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeee---CCCCcEEEEeecccee
Q 007680 349 FMPNGSLEKWLYSH---NYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILL---DENMVAHVSDFGIYKL 422 (593)
Q Consensus 349 ~~~~gsL~~~l~~~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll---~~~~~~kL~Dfg~a~~ 422 (593)
|+++++|.+++... ...+++..+..++.|++.||+|||+++ |+||||||+||++ +.++.+||+|||++..
T Consensus 101 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~----ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~ 176 (285)
T 3is5_A 101 TCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH----VVHKDLKPENILFQDTSPHSPIKIIDFGLAEL 176 (285)
T ss_dssp CCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT----CCCCCCSGGGEEESSSSTTCCEEECCCCCCCC
T ss_pred eCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC----EEECCCCHHHEEEecCCCCCCEEEEeeeccee
Confidence 99999999988643 245999999999999999999999654 9999999999999 4567899999999987
Q ss_pred cCCCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhh
Q 007680 423 LGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVD 502 (593)
Q Consensus 423 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 502 (593)
..... ......+|+.|+|||++. +.++.++||||||+++|||++|+.||......+ .........+..
T Consensus 177 ~~~~~---~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~--~~~~~~~~~~~~------ 244 (285)
T 3is5_A 177 FKSDE---HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEE--VQQKATYKEPNY------ 244 (285)
T ss_dssp -------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHCCCCC------
T ss_pred cCCcc---cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHH--HHhhhccCCccc------
Confidence 65432 223456899999999875 568999999999999999999999997642211 111111110000
Q ss_pred hhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 503 ANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
.......++++.+++.+||+.||++|||+.|+++|
T Consensus 245 ---------~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 279 (285)
T 3is5_A 245 ---------AVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHH 279 (285)
T ss_dssp ---------CC--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred ---------ccccCcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00001134578999999999999999999999864
No 143
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=6e-42 Score=353.63 Aligned_cols=248 Identities=27% Similarity=0.339 Sum_probs=202.9
Q ss_pred hhccccccccCccCcccEEEEEe-CCCCeEEEEEeehh---hHHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEE
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTI-SDGTDVAIKVFNLQ---LERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALV 346 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 346 (593)
.+.|+..+.||+|+||.||+|+. .+|+.||||++... .....+.+.+|++++++++||||+++++++...+..++|
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 132 (348)
T 1u5q_A 53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 132 (348)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEE
Confidence 45699999999999999999996 47899999999753 234456789999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCCC
Q 007680 347 LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEG 426 (593)
Q Consensus 347 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~ 426 (593)
|||+. |+|.+++......+++.++..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++......
T Consensus 133 ~e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~----ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~ 207 (348)
T 1u5q_A 133 MEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN----MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA 207 (348)
T ss_dssp EECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTT----CBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB
T ss_pred EecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC----eeeCCCCHHHEEECCCCCEEEeeccCceecCCC
Confidence 99996 6898888766666999999999999999999999655 999999999999999999999999999865432
Q ss_pred CCccccccccCCccccCccccC---CCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhhh
Q 007680 427 EDSVRQTMTMATIGYMAPEYGL---EGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDA 503 (593)
Q Consensus 427 ~~~~~~~~~~gt~~y~aPE~~~---~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 503 (593)
....||+.|+|||++. +..++.++|||||||++|||++|+.||....... ..........+.
T Consensus 208 ------~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~-~~~~~~~~~~~~-------- 272 (348)
T 1u5q_A 208 ------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-ALYHIAQNESPA-------- 272 (348)
T ss_dssp ------CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHHSCCCC--------
T ss_pred ------CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHhcCCCC--------
Confidence 2346899999999874 5678999999999999999999999997632111 111111111000
Q ss_pred hhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHH
Q 007680 504 NLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKL 547 (593)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 547 (593)
.....++..+.+++.+||+.||++|||+.+++++-
T Consensus 273 ---------~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~ 307 (348)
T 1u5q_A 273 ---------LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHR 307 (348)
T ss_dssp ---------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCH
T ss_pred ---------CCCCCCCHHHHHHHHHHcccChhhCcCHHHHhhCh
Confidence 00112355789999999999999999999999763
No 144
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-41 Score=343.71 Aligned_cols=263 Identities=22% Similarity=0.358 Sum_probs=209.4
Q ss_pred ccccccccCccCcccEEEEEeC-CC---CeEEEEEeehhh-HHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCce-EEE
Q 007680 273 EFNECNLLGTSSFGSVYKGTIS-DG---TDVAIKVFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFK-ALV 346 (593)
Q Consensus 273 ~~~~~~~lg~G~~g~Vy~~~~~-~~---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~-~lv 346 (593)
.|...+.||+|+||.||+|.+. ++ ..||+|++.... ....+.+.+|+.++++++||||+++++++.+.+.. ++|
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 5666789999999999999853 22 369999987543 34567889999999999999999999999876655 999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCCC
Q 007680 347 LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEG 426 (593)
Q Consensus 347 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~ 426 (593)
|||+.+++|.+++......+++.++..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++.....
T Consensus 102 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~----i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 177 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQK----FVHRDLAARNCMLDESFTVKVADFGLARDILDR 177 (298)
T ss_dssp ECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT----CCCSCCSGGGEEECTTCCEEECCTTSSCTTTTG
T ss_pred EecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC----cccCCCCcceEEEcCCCcEEeCcCCCcccccCC
Confidence 9999999999999886667999999999999999999999655 999999999999999999999999999865433
Q ss_pred CC--ccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhhhh
Q 007680 427 ED--SVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDAN 504 (593)
Q Consensus 427 ~~--~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 504 (593)
.. ........+++.|+|||.+.+..++.++||||||+++|+|++|..|+..... .............
T Consensus 178 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~-~~~~~~~~~~~~~---------- 246 (298)
T 3pls_A 178 EYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHID-PFDLTHFLAQGRR---------- 246 (298)
T ss_dssp GGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC-GGGHHHHHHTTCC----------
T ss_pred cccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCC-HHHHHHHhhcCCC----------
Confidence 21 1122334678899999999999999999999999999999996555433211 1122222221111
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhhhcch
Q 007680 505 LVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVKFLDD 557 (593)
Q Consensus 505 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 557 (593)
...+..++..+.+++.+||+.||++|||+.++++.|+++...+..+
T Consensus 247 -------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~~ 292 (298)
T 3pls_A 247 -------LPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLGD 292 (298)
T ss_dssp -------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCSC
T ss_pred -------CCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhcc
Confidence 1111234567899999999999999999999999999998876443
No 145
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=1.7e-41 Score=345.55 Aligned_cols=268 Identities=22% Similarity=0.287 Sum_probs=200.0
Q ss_pred hhccccc-cccCccCcccEEEEEeC-CCCeEEEEEeehhhHHHHHHHHHHHHHHhhc-CCCCcceeeeeeecCCceEEEE
Q 007680 271 TDEFNEC-NLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLERAFRSFDSECEVLRNV-RHRNLIKILSSYSNPDFKALVL 347 (593)
Q Consensus 271 ~~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 347 (593)
.+.|++. +.||+|+||.||+|... +++.||||++........+.+.+|++++.++ +||||+++++++.+.+..++||
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~ 90 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVF 90 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEE
Confidence 4578885 78999999999999964 7899999999876545567889999999985 7999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCc---EEEEeeccceecC
Q 007680 348 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMV---AHVSDFGIYKLLG 424 (593)
Q Consensus 348 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~---~kL~Dfg~a~~~~ 424 (593)
||+++++|.+++..... +++.++..++.|++.||+|||+++ |+||||||+||+++.++. +||+|||++....
T Consensus 91 e~~~~~~L~~~l~~~~~-~~~~~~~~i~~qi~~~l~~lH~~~----ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~ 165 (316)
T 2ac3_A 91 EKMRGGSILSHIHKRRH-FNELEASVVVQDVASALDFLHNKG----IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIK 165 (316)
T ss_dssp ECCTTCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHTT----CCCCCCCGGGEEESCSSSSCSEEECCTTCCC---
T ss_pred EcCCCCcHHHHHhccCC-CCHHHHHHHHHHHHHHHHHHHhCC----ceeCCCCHHHEEEccCCCcCceEEEEccCccccc
Confidence 99999999999987654 899999999999999999999654 999999999999998776 9999999987654
Q ss_pred CCCC-----ccccccccCCccccCccccCC-----CCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcC
Q 007680 425 EGED-----SVRQTMTMATIGYMAPEYGLE-----GIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLP 494 (593)
Q Consensus 425 ~~~~-----~~~~~~~~gt~~y~aPE~~~~-----~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~ 494 (593)
.... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+..... ....
T Consensus 166 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~---~~~~ 242 (316)
T 2ac3_A 166 LNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDR---GEAC 242 (316)
T ss_dssp ----------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC-------CC
T ss_pred cCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccc---cccc
Confidence 3221 111223458999999999865 56899999999999999999999999764322210000 0000
Q ss_pred Cchhhhhhhhhhhhhhhh--hhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 495 HGLTEVVDANLVREEQAF--SAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
......+...+....... .....++.++.+++.+||+.||++|||+.|+++|
T Consensus 243 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 243 PACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp HHHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred hhHHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 000000000000000000 0112345688999999999999999999999986
No 146
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.4e-42 Score=358.66 Aligned_cols=263 Identities=22% Similarity=0.361 Sum_probs=202.0
Q ss_pred hccccccccCccCcccEEEEEeC--C--CCeEEEEEeehh-hHHHHHHHHHHHHHHhhcCCCCcceeeeeeec-CCceEE
Q 007680 272 DEFNECNLLGTSSFGSVYKGTIS--D--GTDVAIKVFNLQ-LERAFRSFDSECEVLRNVRHRNLIKILSSYSN-PDFKAL 345 (593)
Q Consensus 272 ~~~~~~~~lg~G~~g~Vy~~~~~--~--~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~l 345 (593)
..|++.+.||+|+||.||+|++. + +..||+|.++.. .....+.+.+|+.++++++||||+++++++.. .+..++
T Consensus 89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~l 168 (373)
T 3c1x_A 89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 168 (373)
T ss_dssp EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEE
T ss_pred ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEE
Confidence 45778899999999999999864 2 246899998653 23456789999999999999999999998654 567899
Q ss_pred EEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCC
Q 007680 346 VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGE 425 (593)
Q Consensus 346 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~ 425 (593)
||||+++|+|.+++......+++.++..++.|+++||+|||+++ |+||||||+||+++.++.+||+|||+++....
T Consensus 169 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~----ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~ 244 (373)
T 3c1x_A 169 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK----FVHRDLAARNCMLDEKFTVKVADFGLARDMYD 244 (373)
T ss_dssp EEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT----CCCSCCCGGGEEECTTCCEEECCC--------
T ss_pred EEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCC----EecCccchheEEECCCCCEEEeeccccccccc
Confidence 99999999999999887767899999999999999999999654 99999999999999999999999999986643
Q ss_pred CCCc--cccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccchHHHHHHHhcCCchhhhhh
Q 007680 426 GEDS--VRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRRWVKESLPHGLTEVVD 502 (593)
Q Consensus 426 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 502 (593)
.... .......+++.|+|||++.+..++.++|||||||++|||+| |.+||......+ ....+....
T Consensus 245 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~--~~~~~~~~~--------- 313 (373)
T 3c1x_A 245 KEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD--ITVYLLQGR--------- 313 (373)
T ss_dssp -------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSC--HHHHHHTTC---------
T ss_pred cccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHH--HHHHHHcCC---------
Confidence 3211 11233457789999999999999999999999999999999 677886632221 111111110
Q ss_pred hhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhhhcch
Q 007680 503 ANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVKFLDD 557 (593)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 557 (593)
....+..++..+.+++.+||+.||++|||+.|++++|+++...+..+
T Consensus 314 --------~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~~ 360 (373)
T 3c1x_A 314 --------RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 360 (373)
T ss_dssp --------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSC
T ss_pred --------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcccc
Confidence 00111234567899999999999999999999999999998877543
No 147
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=1.7e-41 Score=347.37 Aligned_cols=261 Identities=23% Similarity=0.378 Sum_probs=207.7
Q ss_pred hhccccccccCccCcccEEEEEe------CCCCeEEEEEeehh-hHHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCce
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTI------SDGTDVAIKVFNLQ-LERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFK 343 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 343 (593)
.++|++.+.||+|+||.||+|++ .+++.||+|++... .......+.+|+.++++++||||+++++++.+.+..
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 108 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence 57899999999999999999984 25778999999644 234556788999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCC------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCC---CCcEEE
Q 007680 344 ALVLEFMPNGSLEKWLYSHN------YFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDE---NMVAHV 414 (593)
Q Consensus 344 ~lv~e~~~~gsL~~~l~~~~------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~---~~~~kL 414 (593)
++||||+++++|.+++.... ..+++.++..++.|++.||.|||+++ |+||||||+||+++. +..+||
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~----i~H~dlkp~NIli~~~~~~~~~kl 184 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH----FIHRDIAARNCLLTCPGPGRVAKI 184 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTT----CCCSCCCGGGEEESCSSTTCCEEE
T ss_pred EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC----eecCcCCHhHEEEecCCCcceEEE
Confidence 99999999999999998764 24899999999999999999999654 999999999999984 456999
Q ss_pred EeeccceecCCCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccchHHHHHHHhc
Q 007680 415 SDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRRWVKESL 493 (593)
Q Consensus 415 ~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~ 493 (593)
+|||++................+++.|+|||++.+..++.++||||||+++|+|+| |+.||..... ......+....
T Consensus 185 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--~~~~~~~~~~~ 262 (327)
T 2yfx_A 185 GDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--QEVLEFVTSGG 262 (327)
T ss_dssp CCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--HHHHHHHHTTC
T ss_pred CccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCH--HHHHHHHhcCC
Confidence 99999886544332223344567899999999988899999999999999999998 9999976321 11112211111
Q ss_pred CCchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhhh
Q 007680 494 PHGLTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVKF 554 (593)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 554 (593)
. ......++..+.+++.+||+.||++||++.|++++|+.+....
T Consensus 263 ~-----------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~ 306 (327)
T 2yfx_A 263 R-----------------MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 306 (327)
T ss_dssp C-----------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred C-----------------CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCH
Confidence 0 0111234567899999999999999999999999999987654
No 148
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.1e-42 Score=356.74 Aligned_cols=276 Identities=11% Similarity=0.100 Sum_probs=214.7
Q ss_pred hhccccccccCccCcccEEEEEeCC---------CCeEEEEEeehhhHHHHHHHHHHHHHHhhcCCCCcce---------
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTISD---------GTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIK--------- 332 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~--------- 332 (593)
.++|++.+.||+|+||.||+|+... ++.||+|++... +.+.+|++++++++||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 115 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTP 115 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence 3689999999999999999999763 789999998754 35788999999999999988
Q ss_pred ------eeeeeec-CCceEEEEeccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCe
Q 007680 333 ------ILSSYSN-PDFKALVLEFMPNGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNI 404 (593)
Q Consensus 333 ------l~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NI 404 (593)
+++++.. .+..++||||+ +++|.+++... ...+++.++..++.|++.||+|||+++ |+||||||+||
T Consensus 116 ~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~----ivH~Dikp~NI 190 (352)
T 2jii_A 116 LLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENE----YVHGNVTAENI 190 (352)
T ss_dssp TCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT----CBCSCCCGGGE
T ss_pred ccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCC----ccCCCCCHHHE
Confidence 5666655 67889999999 99999999876 235999999999999999999999654 99999999999
Q ss_pred eeCCCC--cEEEEeeccceecCCCCCcc-----ccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCc
Q 007680 405 LLDENM--VAHVSDFGIYKLLGEGEDSV-----RQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDE 477 (593)
Q Consensus 405 ll~~~~--~~kL~Dfg~a~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~ 477 (593)
+++.++ .+||+|||+++.+....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 191 l~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~ 270 (352)
T 2jii_A 191 FVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTN 270 (352)
T ss_dssp EEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGG
T ss_pred EEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 999998 99999999998765432211 12334799999999999999999999999999999999999999987
Q ss_pred cccccchHHHHHHHhcCCchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhhhcch
Q 007680 478 MFIGEMSLRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVKFLDD 557 (593)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 557 (593)
................. ......+. ......++.++.+++.+||+.||++|||++++++.|+++.......
T Consensus 271 ~~~~~~~~~~~~~~~~~-~~~~~~~~--------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~ 341 (352)
T 2jii_A 271 CLPNTEDIMKQKQKFVD-KPGPFVGP--------CGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLRVS 341 (352)
T ss_dssp GTTCHHHHHHHHHHHHH-SCCCEECT--------TSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCC
T ss_pred CCcCHHHHHHHHHhccC-Chhhhhhh--------ccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcCCC
Confidence 54222222222111000 00000000 0000123568899999999999999999999999999998776433
Q ss_pred -hhccCCcc
Q 007680 558 -AAATNWRN 565 (593)
Q Consensus 558 -~~~~~~~~ 565 (593)
..+.+|+.
T Consensus 342 ~~~~~dw~~ 350 (352)
T 2jii_A 342 PYDPIGLPM 350 (352)
T ss_dssp TTSCCCCCC
T ss_pred cCccccCcC
Confidence 56677765
No 149
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=3.5e-42 Score=367.76 Aligned_cols=250 Identities=22% Similarity=0.242 Sum_probs=197.6
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhh---HHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEE
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALV 346 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 346 (593)
.++|++.+.||+|+||.||+|+.. +|+.||+|+++... ......+.+|+.+++.++||||+++++++...+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 578999999999999999999965 78999999998652 33445678899999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCCC
Q 007680 347 LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEG 426 (593)
Q Consensus 347 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~ 426 (593)
|||+++|+|.+++..... +++..+..++.|++.||+|||+. .+|+||||||+|||++.++.+||+|||+++.....
T Consensus 227 ~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~qi~~aL~~LH~~---~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 302 (446)
T 4ejn_A 227 MEYANGGELFFHLSRERV-FSEDRARFYGAEIVSALDYLHSE---KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD 302 (446)
T ss_dssp ECCCSSCBHHHHHHHHSC-CCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-
T ss_pred EeeCCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHhhc---CCEEECCCCHHHEEECCCCCEEEccCCCceeccCC
Confidence 999999999999977654 89999999999999999999951 34999999999999999999999999999854332
Q ss_pred CCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhhhhhh
Q 007680 427 EDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLV 506 (593)
Q Consensus 427 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (593)
.. ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+....
T Consensus 303 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--~~~~~i~~~~------------- 365 (446)
T 4ejn_A 303 GA--TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--KLFELILMEE------------- 365 (446)
T ss_dssp ------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHCC-------------
T ss_pred Cc--ccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH--HHHHHHHhCC-------------
Confidence 22 234467999999999999999999999999999999999999999763211 1111111100
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhcccCCCCCCC-----CHHHHHHH
Q 007680 507 REEQAFSAKMDCILSIMDFALDCCMESPDMRI-----NMTDAAAK 546 (593)
Q Consensus 507 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 546 (593)
. ..+..+++++.+++.+||+.||++|| +++|+++|
T Consensus 366 ---~--~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~h 405 (446)
T 4ejn_A 366 ---I--RFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 405 (446)
T ss_dssp ---C--CCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred ---C--CCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhC
Confidence 0 01112356789999999999999999 99999976
No 150
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=2.7e-41 Score=341.14 Aligned_cols=262 Identities=22% Similarity=0.363 Sum_probs=208.0
Q ss_pred hhccccccccCccCcccEEEEEeCC----CCeEEEEEeehh-hHHHHHHHHHHHHHHhhcCCCCcceeeeee-ecCCceE
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTISD----GTDVAIKVFNLQ-LERAFRSFDSECEVLRNVRHRNLIKILSSY-SNPDFKA 344 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~ 344 (593)
..+|++.+.||+|+||.||+|++.+ +..||+|.++.. .....+.+.+|+.++++++||||+++++++ ...+..+
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 103 (298)
T 3f66_A 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 103 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceE
Confidence 4578999999999999999998642 235899998753 234557789999999999999999999985 4556889
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecC
Q 007680 345 LVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424 (593)
Q Consensus 345 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~ 424 (593)
+||||+++++|.+++......+++.++..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++...
T Consensus 104 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~----i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~ 179 (298)
T 3f66_A 104 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK----FVHRDLAARNCMLDEKFTVKVADFGLARDMY 179 (298)
T ss_dssp EEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTT----CCCSCCSGGGEEECTTCCEEECSCGGGCCCS
T ss_pred EEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC----ccCCCCchheEEECCCCCEEECccccccccc
Confidence 999999999999999877667899999999999999999999655 9999999999999999999999999998765
Q ss_pred CCCCc--cccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccchHHHHHHHhcCCchhhhh
Q 007680 425 EGEDS--VRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRRWVKESLPHGLTEVV 501 (593)
Q Consensus 425 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 501 (593)
..... .......+|+.|+|||.+.+..++.++||||||+++|+|++ |.+||...... ...........
T Consensus 180 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~--~~~~~~~~~~~------- 250 (298)
T 3f66_A 180 DKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF--DITVYLLQGRR------- 250 (298)
T ss_dssp CGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTT--THHHHHHTTCC-------
T ss_pred ccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHH--HHHHHHhcCCC-------
Confidence 43221 12233457889999999988899999999999999999999 55666553221 11111111110
Q ss_pred hhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhhhc
Q 007680 502 DANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVKFL 555 (593)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~ 555 (593)
...+..++..+.+++.+||+.||++|||+.|+++.|+++...+.
T Consensus 251 ----------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~ 294 (298)
T 3f66_A 251 ----------LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 294 (298)
T ss_dssp ----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSC
T ss_pred ----------CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhc
Confidence 00112235678999999999999999999999999999987664
No 151
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=2.9e-42 Score=368.78 Aligned_cols=260 Identities=27% Similarity=0.434 Sum_probs=207.6
Q ss_pred HhhhccccccccCccCcccEEEEEeCCCCeEEEEEeehhhHHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEEEe
Q 007680 269 RATDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVLE 348 (593)
Q Consensus 269 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 348 (593)
...++|++.+.||+|+||.||+|.+.++..||||+++.... ..+.+.+|++++++++||||+++++++.+ +..++|||
T Consensus 181 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e 258 (452)
T 1fmk_A 181 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE 258 (452)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred cChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEeh
Confidence 34678999999999999999999998778899999986532 34678999999999999999999999876 67899999
Q ss_pred ccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCCCC
Q 007680 349 FMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGE 427 (593)
Q Consensus 349 ~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~ 427 (593)
|+++|+|.+++.... ..+++.++..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++......
T Consensus 259 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~----ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 334 (452)
T 1fmk_A 259 YMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN----YVHRDLRAANILVGENLVCKVADFGLARLIEDNE 334 (452)
T ss_dssp CCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT----CCCSCCSGGGEEECGGGCEEECCCCTTC------
T ss_pred hhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC----eeCCCCChhhEEECCCCCEEECCCccceecCCCc
Confidence 999999999997532 35899999999999999999999654 9999999999999999999999999998765432
Q ss_pred CccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccchHHHHHHHhcCCchhhhhhhhhh
Q 007680 428 DSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLV 506 (593)
Q Consensus 428 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (593)
.. ......++..|+|||++.+..++.++|||||||++|||++ |+.||......+ ....+....
T Consensus 335 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~--~~~~i~~~~------------- 398 (452)
T 1fmk_A 335 YT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE--VLDQVERGY------------- 398 (452)
T ss_dssp ---------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--HHHHHHTTC-------------
T ss_pred ee-cccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHcCC-------------
Confidence 11 1223456788999999988899999999999999999999 999997642211 111111110
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhhh
Q 007680 507 REEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVKF 554 (593)
Q Consensus 507 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 554 (593)
..+.+..++..+.+++.+||+.||++|||++++++.|+++....
T Consensus 399 ----~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~ 442 (452)
T 1fmk_A 399 ----RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 442 (452)
T ss_dssp ----CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred ----CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccC
Confidence 11112345678899999999999999999999999999986543
No 152
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=2.3e-41 Score=362.28 Aligned_cols=263 Identities=22% Similarity=0.237 Sum_probs=197.1
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehh--hHHHHHHHHHHHHHHhhcCCCCcceeeeeeecC------C
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQ--LERAFRSFDSECEVLRNVRHRNLIKILSSYSNP------D 341 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~ 341 (593)
.++|++.+.||+|+||.||+|.+. +|+.||||++... .....+.+.+|+.+++.++||||+++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 578999999999999999999865 6899999999754 334556788999999999999999999998654 3
Q ss_pred ceEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccce
Q 007680 342 FKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYK 421 (593)
Q Consensus 342 ~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~ 421 (593)
..++||||+++ +|.+.+.. .+++.++..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++
T Consensus 141 ~~~lv~E~~~~-~l~~~~~~---~l~~~~~~~~~~qil~aL~~lH~~~----iiHrDlkp~NIll~~~~~~kl~DFG~a~ 212 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAG----IIHRDLKPSNIVVKSDCTLKILDFGLAR 212 (464)
T ss_dssp EEEEEEECCSE-EHHHHHTS---CCCHHHHHHHHHHHHHHHHHHHHTT----CCCCCCCGGGEEECTTSCEEECCCCCC-
T ss_pred eEEEEEeCCCC-CHHHHHhh---cCCHHHHHHHHHHHHHHHHHHHHCC----cccCCCChHhEEEeCCCCEEEEEEEeee
Confidence 57999999965 57776643 2899999999999999999999654 9999999999999999999999999998
Q ss_pred ecCCCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhh-
Q 007680 422 LLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEV- 500 (593)
Q Consensus 422 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~- 500 (593)
...... ......||+.|+|||++.+..++.++||||+||++|||++|+.||.+....+ .+...+ ........+.
T Consensus 213 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~-~~~~i~-~~lg~p~~~~~ 287 (464)
T 3ttj_A 213 TAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID-QWNKVI-EQLGTPCPEFM 287 (464)
T ss_dssp ----CC---CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHH-HHHCSCCHHHH
T ss_pred ecCCCc---ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHH-HhcCCCCHHHH
Confidence 765432 2344579999999999999999999999999999999999999997642111 111111 1110000000
Q ss_pred ----------hhhhhh----------hh---hhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 501 ----------VDANLV----------RE---EQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 501 ----------~~~~~~----------~~---~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
+..... .. ..........++++.+|+.+||..||++|||++|+++|
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 288 KKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp TTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000000 00 00001112236678999999999999999999999987
No 153
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=2.6e-41 Score=338.51 Aligned_cols=257 Identities=22% Similarity=0.296 Sum_probs=206.4
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhhH------HHHHHHHHHHHHHhhcCCCCcceeeeeeecCCce
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLE------RAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFK 343 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 343 (593)
.++|++.+.||+|+||.||+|+.. +++.||+|+++.... ...+.+.+|+.++++++||||+++++++.+.+..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 83 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence 467999999999999999999976 689999999976421 1356789999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCC----cEEEEeecc
Q 007680 344 ALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENM----VAHVSDFGI 419 (593)
Q Consensus 344 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~----~~kL~Dfg~ 419 (593)
++||||+++++|.+++..... +++.++..++.|++.||+|||+++ ++||||||+||+++.++ .+||+|||.
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~l~~lH~~~----i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~ 158 (283)
T 3bhy_A 84 VLILELVSGGELFDFLAEKES-LTEDEATQFLKQILDGVHYLHSKR----IAHFDLKPENIMLLDKNVPNPRIKLIDFGI 158 (283)
T ss_dssp EEEEECCCSCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHTT----EECSCCSGGGEEESCSSSSSCCEEECCCTT
T ss_pred EEEEeecCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhCC----ccCCCCChHHEEEecCCCCCCceEEEeccc
Confidence 999999999999999976544 899999999999999999999654 99999999999998877 899999999
Q ss_pred ceecCCCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhh
Q 007680 420 YKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTE 499 (593)
Q Consensus 420 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 499 (593)
+........ .....+++.|+|||++.+..++.++||||||+++|+|++|+.||...... .....+......
T Consensus 159 ~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~~~~~---- 229 (283)
T 3bhy_A 159 AHKIEAGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQ--ETLTNISAVNYD---- 229 (283)
T ss_dssp CEECC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHHHHTTCCC----
T ss_pred ceeccCCCc---ccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchH--HHHHHhHhcccC----
Confidence 987654322 23346899999999999899999999999999999999999999763211 111111100000
Q ss_pred hhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH--HHHhh
Q 007680 500 VVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK--LKKIK 551 (593)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~--L~~i~ 551 (593)
........++..+.+++.+||+.||++|||+.|+++| ++.+.
T Consensus 230 ----------~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~ 273 (283)
T 3bhy_A 230 ----------FDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIR 273 (283)
T ss_dssp ----------CCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHH
T ss_pred ----------CcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHH
Confidence 0011112345678999999999999999999999986 45543
No 154
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=1.2e-41 Score=340.37 Aligned_cols=259 Identities=22% Similarity=0.385 Sum_probs=211.9
Q ss_pred hhhccccccccCccCcccEEEEEeCCCCeEEEEEeehhhHHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEEEec
Q 007680 270 ATDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVLEF 349 (593)
Q Consensus 270 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 349 (593)
..++|++.+.||+|+||.||+|...+++.||+|+++... ...+.+.+|++++++++||||+++++++.. +..++||||
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~ 88 (279)
T 1qpc_A 11 PRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEY 88 (279)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred CHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEec
Confidence 457899999999999999999998888899999997643 234678999999999999999999998864 568999999
Q ss_pred cCCCCHHHHHhhCCC-CCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCCCCC
Q 007680 350 MPNGSLEKWLYSHNY-FLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGED 428 (593)
Q Consensus 350 ~~~gsL~~~l~~~~~-~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~ 428 (593)
+++++|.+++..... .+++.++..++.|++.||+|||+++ |+||||||+||++++++.+||+|||.+........
T Consensus 89 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~----i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 164 (279)
T 1qpc_A 89 MENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN----YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY 164 (279)
T ss_dssp CTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT----EECSCCSGGGEEECTTSCEEECCCTTCEECSSSCE
T ss_pred CCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC----eeccCCCHhhEEEcCCCCEEECCCcccccccCccc
Confidence 999999999976432 5899999999999999999999654 99999999999999999999999999987754332
Q ss_pred ccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccchHHHHHHHhcCCchhhhhhhhhhh
Q 007680 429 SVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLVR 507 (593)
Q Consensus 429 ~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 507 (593)
. ......++..|+|||++.+..++.++||||||+++|||++ |+.||...... .....+.....
T Consensus 165 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~~~~~~~~~------------- 228 (279)
T 1qpc_A 165 T-AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP--EVIQNLERGYR------------- 228 (279)
T ss_dssp E-CCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHHHHHTTCC-------------
T ss_pred c-cccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH--HHHHHHhcccC-------------
Confidence 1 2233456788999999988889999999999999999999 99999763221 11111111100
Q ss_pred hhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhhh
Q 007680 508 EEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVKF 554 (593)
Q Consensus 508 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 554 (593)
...+..++.++.+++.+||+.||++|||+.++++.|+++....
T Consensus 229 ----~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 271 (279)
T 1qpc_A 229 ----MVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 271 (279)
T ss_dssp ----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred ----CCCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhc
Confidence 0111234568899999999999999999999999999987654
No 155
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=4.5e-41 Score=360.52 Aligned_cols=274 Identities=22% Similarity=0.261 Sum_probs=190.1
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehh--hHHHHHHHHHHHHHHhhcCCCCcceeeeeeec-----CCc
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQ--LERAFRSFDSECEVLRNVRHRNLIKILSSYSN-----PDF 342 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-----~~~ 342 (593)
.++|++.+.||+|+||.||+|++. +++.||||++... .....+.+.+|++++++++||||+++++++.. .+.
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 468999999999999999999865 7899999998653 23455678999999999999999999999843 357
Q ss_pred eEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeecccee
Q 007680 343 KALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKL 422 (593)
Q Consensus 343 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~ 422 (593)
.|+||||+ +++|.+++.... .+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.
T Consensus 132 ~~lv~e~~-~~~L~~~~~~~~-~l~~~~~~~~~~qi~~aL~~LH~~~----iiHrDlKp~NILl~~~~~~kl~DFGla~~ 205 (458)
T 3rp9_A 132 LYVVLEIA-DSDFKKLFRTPV-YLTELHIKTLLYNLLVGVKYVHSAG----ILHRDLKPANCLVNQDCSVKVCDFGLART 205 (458)
T ss_dssp EEEEECCC-SEEHHHHHHSSC-CCCHHHHHHHHHHHHHHHHHHHHTT----CBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred EEEEEecc-ccchhhhcccCC-CCCHHHHHHHHHHHHHHHHHHHhCC----cCCCCCChhhEEECCCCCEeecccccchh
Confidence 89999998 579999997665 4999999999999999999999654 99999999999999999999999999987
Q ss_pred cCCCCCc-------------------------cccccccCCccccCcccc-CCCCCCccchHHHHHHHHHHHHh------
Q 007680 423 LGEGEDS-------------------------VRQTMTMATIGYMAPEYG-LEGIVSAKCDVYSYGVLLMETFT------ 470 (593)
Q Consensus 423 ~~~~~~~-------------------------~~~~~~~gt~~y~aPE~~-~~~~~s~~~DvwSlGvvl~ellt------ 470 (593)
....... .......||+.|+|||++ .+..++.++|||||||++|||++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~ 285 (458)
T 3rp9_A 206 VDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENV 285 (458)
T ss_dssp TTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTC
T ss_pred ccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccccc
Confidence 6533211 112345689999999975 56679999999999999999999
Q ss_pred -----CCCCCCcccccc------------------chHHHHHHHhcCCchhhhhhhhhhhhh-------------hhhhh
Q 007680 471 -----RKRPTDEMFIGE------------------MSLRRWVKESLPHGLTEVVDANLVREE-------------QAFSA 514 (593)
Q Consensus 471 -----g~~pf~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~ 514 (593)
|+++|.+...-. ......+.........+.+........ .....
T Consensus 286 ~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (458)
T 3rp9_A 286 AYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAER 365 (458)
T ss_dssp SSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGG
T ss_pred cccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHH
Confidence 555554421000 000000110000000000000000000 00001
Q ss_pred hHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH--HHHh
Q 007680 515 KMDCILSIMDFALDCCMESPDMRINMTDAAAK--LKKI 550 (593)
Q Consensus 515 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~--L~~i 550 (593)
....++++.+|+.+||..||++|||++|+++| ++++
T Consensus 366 ~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~ 403 (458)
T 3rp9_A 366 FPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEV 403 (458)
T ss_dssp STTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTT
T ss_pred CCCCCHHHHHHHHHHhccCccccCCHHHHhcCHhhhhc
Confidence 12335678999999999999999999999997 4444
No 156
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=1.1e-41 Score=354.32 Aligned_cols=247 Identities=24% Similarity=0.277 Sum_probs=193.6
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhh---HHHHHHHHHHHHH-HhhcCCCCcceeeeeeecCCceEE
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQL---ERAFRSFDSECEV-LRNVRHRNLIKILSSYSNPDFKAL 345 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~l 345 (593)
.++|++.+.||+|+||.||+|+.+ +++.||+|+++... ......+..|..+ ++.++||||+++++++.+.+..|+
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 468999999999999999999976 68899999998653 2334456677776 567899999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCC
Q 007680 346 VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGE 425 (593)
Q Consensus 346 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~ 425 (593)
||||+++|+|.+++...+. +++..+..++.||+.||+|||+++ |+||||||+||+++.++.+||+|||+++....
T Consensus 117 v~E~~~gg~L~~~l~~~~~-~~~~~~~~~~~qi~~aL~~LH~~g----ivHrDlkp~NIll~~~g~ikL~DFG~a~~~~~ 191 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRERC-FLEPRARFYAAEIASALGYLHSLN----IVYRDLKPENILLDSQGHIVLTDFGLCKENIE 191 (373)
T ss_dssp EEECCCSCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHTT----CCCCCCCGGGEEECTTSCEEECCCCBCGGGBC
T ss_pred EEeCCCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCC----ceecCCCHHHEEECCCCCEEEeeCcccccccc
Confidence 9999999999999987654 899999999999999999999654 99999999999999999999999999986433
Q ss_pred CCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhhhhh
Q 007680 426 GEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANL 505 (593)
Q Consensus 426 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 505 (593)
... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+.. ...
T Consensus 192 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~--~~~~~i~~-----------~~~ 256 (373)
T 2r5t_A 192 HNS--TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA--EMYDNILN-----------KPL 256 (373)
T ss_dssp CCC--CCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHH--HHHHHHHH-----------SCC
T ss_pred CCC--ccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH--HHHHHHHh-----------ccc
Confidence 221 234457999999999999999999999999999999999999999763211 11111110 000
Q ss_pred hhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHH
Q 007680 506 VREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAA 544 (593)
Q Consensus 506 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 544 (593)
..+..++.++.+++.+||+.||++||++.+.+
T Consensus 257 -------~~~~~~~~~~~~li~~lL~~dp~~R~~~~~~~ 288 (373)
T 2r5t_A 257 -------QLKPNITNSARHLLEGLLQKDRTKRLGAKDDF 288 (373)
T ss_dssp -------CCCSSSCHHHHHHHHHHTCSSGGGSTTTTTTH
T ss_pred -------CCCCCCCHHHHHHHHHHcccCHHhCCCCCCCH
Confidence 00112356789999999999999999985433
No 157
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=1.2e-41 Score=350.38 Aligned_cols=252 Identities=21% Similarity=0.276 Sum_probs=202.1
Q ss_pred hhhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhhHHHHHHHHHHHHHHhhc-CCCCcceeeeeeecCCceEEEE
Q 007680 270 ATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLERAFRSFDSECEVLRNV-RHRNLIKILSSYSNPDFKALVL 347 (593)
Q Consensus 270 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 347 (593)
..++|++.+.||+|+||.||+|..+ +|+.||+|+++.... ...+|++++.++ +||||+++++++.+++..++||
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ 95 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVT 95 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEE
Confidence 4678999999999999999999976 689999999976532 245688888888 7999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCC----CcEEEEeeccceec
Q 007680 348 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDEN----MVAHVSDFGIYKLL 423 (593)
Q Consensus 348 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~----~~~kL~Dfg~a~~~ 423 (593)
||+++|+|.+++...+. +++.++..++.|++.||+|||+++ |+||||||+||++.++ +.+||+|||+++..
T Consensus 96 E~~~gg~L~~~i~~~~~-~~~~~~~~~~~qi~~al~~lH~~g----ivHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~ 170 (342)
T 2qr7_A 96 ELMKGGELLDKILRQKF-FSEREASAVLFTITKTVEYLHAQG----VVHRDLKPSNILYVDESGNPESIRICDFGFAKQL 170 (342)
T ss_dssp CCCCSCBHHHHHHTCTT-CCHHHHHHHHHHHHHHHHHHHHTT----EECSCCCGGGEEESSSSCSGGGEEECCCTTCEEC
T ss_pred eCCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCC----cEeccCCHHHEEEecCCCCcCeEEEEECCCcccC
Confidence 99999999999987654 999999999999999999999654 9999999999998543 35999999999876
Q ss_pred CCCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccc-cchHHHHHHHhcCCchhhhhh
Q 007680 424 GEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIG-EMSLRRWVKESLPHGLTEVVD 502 (593)
Q Consensus 424 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 502 (593)
..... ......||+.|+|||++.+..++.++|||||||++|||++|..||...... .......+.......
T Consensus 171 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~------ 242 (342)
T 2qr7_A 171 RAENG--LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSL------ 242 (342)
T ss_dssp BCTTC--CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCC------
T ss_pred cCCCC--ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCccc------
Confidence 54332 223456899999999998888999999999999999999999999753211 111111111110000
Q ss_pred hhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 503 ANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
.......++.++.+++.+||..||++|||+.|+++|
T Consensus 243 --------~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 243 --------SGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp --------CSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred --------CccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 000112345678999999999999999999999986
No 158
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=6.6e-42 Score=346.19 Aligned_cols=253 Identities=23% Similarity=0.322 Sum_probs=201.5
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhhHHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEEEec
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVLEF 349 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 349 (593)
.++|++.+.||+|+||.||+|++. +++.||+|++........+.+.+|++++++++||||+++++++...+..++||||
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 97 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEF 97 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEEC
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEe
Confidence 578999999999999999999976 6899999999876655667899999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCCCCCc
Q 007680 350 MPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDS 429 (593)
Q Consensus 350 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~ 429 (593)
+++++|.+++......+++..+..++.|++.||.|||+++ ++||||||+||+++.++.+||+|||++.......
T Consensus 98 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~----i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 171 (302)
T 2j7t_A 98 CPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKR----IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTL-- 171 (302)
T ss_dssp CTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTT----CCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHH--
T ss_pred CCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCC----cccCCCCHHHEEECCCCCEEEEECCCCccccccc--
Confidence 9999999998876566999999999999999999999654 9999999999999999999999999875432111
Q ss_pred cccccccCCccccCcccc-----CCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhhhh
Q 007680 430 VRQTMTMATIGYMAPEYG-----LEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDAN 504 (593)
Q Consensus 430 ~~~~~~~gt~~y~aPE~~-----~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 504 (593)
.......|++.|+|||++ .+..++.++||||||+++|+|++|+.||....... ..........+
T Consensus 172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~~---------- 240 (302)
T 2j7t_A 172 QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR-VLLKIAKSDPP---------- 240 (302)
T ss_dssp HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHHSCCC----------
T ss_pred cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHH-HHHHHhccCCc----------
Confidence 112234689999999987 46778999999999999999999999997642211 11111111100
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 505 LVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 505 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
....+..++.++.+++.+||+.||++|||+.|+++|
T Consensus 241 ------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 276 (302)
T 2j7t_A 241 ------TLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEH 276 (302)
T ss_dssp ------CCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTS
T ss_pred ------ccCCccccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 001112345678999999999999999999999875
No 159
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=4.2e-41 Score=344.77 Aligned_cols=262 Identities=20% Similarity=0.281 Sum_probs=203.1
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhhHHHHHHHHHHHHHHhhcC-CCCcceeeeeeec--CCceEEE
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLERAFRSFDSECEVLRNVR-HRNLIKILSSYSN--PDFKALV 346 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~--~~~~~lv 346 (593)
.++|++.+.||+|+||.||+|+.. +++.||+|+++... .+.+.+|++++++++ ||||+++++++.+ ....++|
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv 111 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV 111 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc---hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEE
Confidence 478999999999999999999864 78999999997543 356889999999997 9999999999987 5678999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCC-cEEEEeeccceecCC
Q 007680 347 LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENM-VAHVSDFGIYKLLGE 425 (593)
Q Consensus 347 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~-~~kL~Dfg~a~~~~~ 425 (593)
|||+++++|.+++.. +++.++..++.|++.||+|||+++ |+||||||+||+++.++ .+||+|||+++....
T Consensus 112 ~e~~~~~~l~~~~~~----~~~~~~~~~~~qi~~~l~~lH~~~----ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~ 183 (330)
T 3nsz_A 112 FEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCHSMG----IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 183 (330)
T ss_dssp EECCCCCCHHHHGGG----CCHHHHHHHHHHHHHHHHHHHHTT----EECCCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred EeccCchhHHHHHHh----CCHHHHHHHHHHHHHHHHHHHhCC----eeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCC
Confidence 999999999999854 889999999999999999999654 99999999999999776 899999999987654
Q ss_pred CCCccccccccCCccccCccccCC-CCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhhhh
Q 007680 426 GEDSVRQTMTMATIGYMAPEYGLE-GIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDAN 504 (593)
Q Consensus 426 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 504 (593)
... .....++..|+|||++.+ ..++.++|||||||++|||++|+.||.........+.............+.++..
T Consensus 184 ~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 260 (330)
T 3nsz_A 184 GQE---YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKY 260 (330)
T ss_dssp TCC---CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHT
T ss_pred CCc---cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHh
Confidence 332 234568999999999877 6799999999999999999999999965332222222211111100011111000
Q ss_pred h---------------hh---hhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 505 L---------------VR---EEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 505 ~---------------~~---~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
. .. ..........+++++.+++.+||+.||++|||++|+++|
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 261 NIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp TCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred ccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 0 00 000001112246789999999999999999999999976
No 160
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=9.9e-42 Score=342.88 Aligned_cols=261 Identities=24% Similarity=0.375 Sum_probs=200.6
Q ss_pred hhccccccccCccCcccEEEEEeC--CCC--eEEEEEeehhh---HHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCce
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS--DGT--DVAIKVFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFK 343 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~--~~~--~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 343 (593)
.++|++.+.||+|+||.||+|++. +++ .||+|+++... ....+.+.+|++++++++||||+++++++...+ .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 468999999999999999999853 333 68999987642 345678899999999999999999999998765 8
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceec
Q 007680 344 ALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLL 423 (593)
Q Consensus 344 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~ 423 (593)
++||||+++++|.+++......+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++...
T Consensus 96 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~----i~H~dikp~Nili~~~~~~kl~Dfg~~~~~ 171 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR----FIHRDLAARNLLLATRDLVKIGDFGLMRAL 171 (291)
T ss_dssp EEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTT----EECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred eeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCC----cccCCCchheEEEcCCCCEEEccccccccc
Confidence 8999999999999999876566999999999999999999999654 999999999999999999999999999887
Q ss_pred CCCCCcc-ccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccchHHHHHHHhcCCchhhhh
Q 007680 424 GEGEDSV-RQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRRWVKESLPHGLTEVV 501 (593)
Q Consensus 424 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 501 (593)
....... ......++..|+|||++.+..++.++||||||+++|+|++ |+.||...... .....+...
T Consensus 172 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~~~~~~--------- 240 (291)
T 1u46_A 172 PQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS--QILHKIDKE--------- 240 (291)
T ss_dssp CC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHHHTS---------
T ss_pred cccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHH--HHHHHHHcc---------
Confidence 5543221 1233457888999999988889999999999999999999 99999764221 111111100
Q ss_pred hhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhhh
Q 007680 502 DANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVKF 554 (593)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 554 (593)
....+....++.++.+++.+||+.||++|||+.+++++|+++....
T Consensus 241 -------~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 286 (291)
T 1u46_A 241 -------GERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTD 286 (291)
T ss_dssp -------CCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred -------CCCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCccc
Confidence 0001111234668899999999999999999999999999886543
No 161
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=6.7e-41 Score=348.26 Aligned_cols=258 Identities=26% Similarity=0.359 Sum_probs=209.0
Q ss_pred HHHHHhhhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhh--------HHHHHHHHHHHHHHhhc-CCCCcceee
Q 007680 265 LDIQRATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQL--------ERAFRSFDSECEVLRNV-RHRNLIKIL 334 (593)
Q Consensus 265 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l-~h~niv~l~ 334 (593)
.......++|++.+.||+|+||.||+|++. +|+.||||+++... ....+.+.+|+.++.++ +||||++++
T Consensus 87 ~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 166 (365)
T 2y7j_A 87 AAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLI 166 (365)
T ss_dssp HHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEE
T ss_pred hhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEE
Confidence 344556788999999999999999999976 79999999987542 22356788999999999 799999999
Q ss_pred eeeecCCceEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEE
Q 007680 335 SSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHV 414 (593)
Q Consensus 335 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL 414 (593)
+++...+..++||||+++++|.+++..... +++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||
T Consensus 167 ~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~-l~~~~~~~i~~qi~~~L~~LH~~g----i~H~Dlkp~NIl~~~~~~ikl 241 (365)
T 2y7j_A 167 DSYESSSFMFLVFDLMRKGELFDYLTEKVA-LSEKETRSIMRSLLEAVSFLHANN----IVHRDLKPENILLDDNMQIRL 241 (365)
T ss_dssp EEEEBSSEEEEEECCCTTCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHTT----EECSCCSGGGEEECTTCCEEE
T ss_pred EEEeeCCEEEEEEEeCCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhCC----eecCCCCHHHEEECCCCCEEE
Confidence 999999999999999999999999986544 999999999999999999999654 999999999999999999999
Q ss_pred EeeccceecCCCCCccccccccCCccccCccccCC------CCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHH
Q 007680 415 SDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLE------GIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRW 488 (593)
Q Consensus 415 ~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~ 488 (593)
+|||++..+..... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... ......
T Consensus 242 ~DfG~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~--~~~~~~ 316 (365)
T 2y7j_A 242 SDFGFSCHLEPGEK---LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQ--ILMLRM 316 (365)
T ss_dssp CCCTTCEECCTTCC---BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHH
T ss_pred EecCcccccCCCcc---cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCH--HHHHHH
Confidence 99999987754332 234579999999998753 3588999999999999999999999976321 111111
Q ss_pred HHHhcCCchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 489 VKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
+....... ..+....++..+.+++.+||+.||++|||+.|+++|
T Consensus 317 i~~~~~~~--------------~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 360 (365)
T 2y7j_A 317 IMEGQYQF--------------SSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQH 360 (365)
T ss_dssp HHHTCCCC--------------CHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHhCCCCC--------------CCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 11111000 011112345678999999999999999999999875
No 162
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=8.8e-42 Score=354.38 Aligned_cols=267 Identities=22% Similarity=0.290 Sum_probs=207.6
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehh-hHHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEEEe
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQ-LERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVLE 348 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 348 (593)
.++|++.+.||+|+||.||+|.+. +++.||+|+++.. .....+.+.+|+.++++++||||+++++++.+++..++|||
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 111 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 111 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence 468999999999999999999976 7899999999765 23445778999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCCCCC
Q 007680 349 FMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGED 428 (593)
Q Consensus 349 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~ 428 (593)
|+++++|.+++..... +++..+..++.|++.||+|||++ .+|+||||||+||+++.++.+||+|||++......
T Consensus 112 ~~~~~~L~~~l~~~~~-~~~~~~~~i~~~i~~~l~~lh~~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-- 185 (360)
T 3eqc_A 112 HMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYLREK---HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-- 185 (360)
T ss_dssp CCTTCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHH---HCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH--
T ss_pred CCCCCCHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHh---CCEEcCCccHHHEEECCCCCEEEEECCCCcccccc--
Confidence 9999999999987654 89999999999999999999964 14999999999999999999999999998755321
Q ss_pred ccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHH--------------------
Q 007680 429 SVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRW-------------------- 488 (593)
Q Consensus 429 ~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~-------------------- 488 (593)
......||+.|+|||++.+..++.++|||||||++|+|++|+.||.............
T Consensus 186 --~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (360)
T 3eqc_A 186 --MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRP 263 (360)
T ss_dssp --C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC--------------------
T ss_pred --cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCc
Confidence 1233468999999999999999999999999999999999999997643221110000
Q ss_pred ----HHH-hcCCchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 489 ----VKE-SLPHGLTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 489 ----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
... ..+....+..+....... .......++.++.+++.+||+.||++|||++|+++|
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 325 (360)
T 3eqc_A 264 LNKFGMDSRPPMAIFELLDYIVNEPP-PKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 325 (360)
T ss_dssp ----------CCCHHHHHHHHHHSCC-CCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred ccccccCCCCcccchhhhhHHhccCC-CCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 000 000001111111110000 000111245688999999999999999999999987
No 163
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=2.8e-41 Score=340.34 Aligned_cols=249 Identities=20% Similarity=0.286 Sum_probs=207.3
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhh---HHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEE
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALV 346 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 346 (593)
.++|.+.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 468999999999999999999976 68899999997652 34556788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCCC
Q 007680 347 LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEG 426 (593)
Q Consensus 347 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~ 426 (593)
|||+++++|.+++..... +++.++..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||.+......
T Consensus 94 ~e~~~~~~L~~~~~~~~~-~~~~~~~~i~~qi~~~l~~lH~~~----i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 168 (294)
T 2rku_A 94 LELCRRRSLLELHKRRKA-LTEPEARYYLRQIVLGCQYLHRNR----VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 168 (294)
T ss_dssp EECCTTCBHHHHHHHHCS-CCHHHHHHHHHHHHHHHHHHHHTT----EECCCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred EecCCCCCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCC----ccccCCChHhEEEcCCCCEEEEeccCceecccC
Confidence 999999999999877554 899999999999999999999654 999999999999999999999999999876533
Q ss_pred CCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhhhhhh
Q 007680 427 EDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLV 506 (593)
Q Consensus 427 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (593)
.. ......|++.|+|||++.+..++.++||||||+++|+|++|+.||......+ ....+... .
T Consensus 169 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--~~~~~~~~-----------~-- 231 (294)
T 2rku_A 169 GE--RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE--TYLRIKKN-----------E-- 231 (294)
T ss_dssp TC--CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH--HHHHHHTT-----------C--
T ss_pred cc--ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHhhc-----------c--
Confidence 22 2234568999999999998899999999999999999999999997632211 00001000 0
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 507 REEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 507 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
...+..++..+.+++.+||+.||++|||+.|++++
T Consensus 232 -----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 232 -----YSIPKHINPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp -----CCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred -----CCCccccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 00111234578999999999999999999999986
No 164
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=1.1e-41 Score=349.13 Aligned_cols=268 Identities=22% Similarity=0.288 Sum_probs=197.1
Q ss_pred hhhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhh--HHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEE
Q 007680 270 ATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALV 346 (593)
Q Consensus 270 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 346 (593)
..++|++.+.||+|+||.||+|+.. +++.||+|+++... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 111 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLI 111 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEE
Confidence 4678999999999999999999865 78999999997543 23345678999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeee-----CCCCcEEEEeeccce
Q 007680 347 LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILL-----DENMVAHVSDFGIYK 421 (593)
Q Consensus 347 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll-----~~~~~~kL~Dfg~a~ 421 (593)
|||++ |+|.+++..... +++..+..++.|++.||+|||+++ |+||||||+||++ +.++.+||+|||++.
T Consensus 112 ~e~~~-~~L~~~~~~~~~-~~~~~~~~i~~ql~~~l~~LH~~~----ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~ 185 (329)
T 3gbz_A 112 FEYAE-NDLKKYMDKNPD-VSMRVIKSFLYQLINGVNFCHSRR----CLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185 (329)
T ss_dssp EECCS-EEHHHHHHHCTT-CCHHHHHHHHHHHHHHHHHHHHTT----CCCSCCCGGGEEEEC-----CCEEEECCTTHHH
T ss_pred EecCC-CCHHHHHhhcCC-CCHHHHHHHHHHHHHHHHHHHhCC----EECCCCCHHHEEEecCCCCccceEEECcCCCcc
Confidence 99997 599999987765 999999999999999999999654 9999999999999 455569999999998
Q ss_pred ecCCCCCccccccccCCccccCccccCCC-CCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHH-hcCCc--h
Q 007680 422 LLGEGEDSVRQTMTMATIGYMAPEYGLEG-IVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKE-SLPHG--L 497 (593)
Q Consensus 422 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~-~~~~~--~ 497 (593)
....... ......+|+.|+|||++.+. .++.++|||||||++|||++|+.||......+ ........ ..+.. .
T Consensus 186 ~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~ 262 (329)
T 3gbz_A 186 AFGIPIR--QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEID-QLFKIFEVLGLPDDTTW 262 (329)
T ss_dssp HHC-------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCTTTS
T ss_pred ccCCccc--ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHH-HHHHHHHHhCCCchhhh
Confidence 7653322 22345689999999998775 48999999999999999999999997643221 11111111 11110 0
Q ss_pred hhhhh--------hhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 498 TEVVD--------ANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 498 ~~~~~--------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
..... +..............++.++.+++.+||+.||++|||+.|+++|
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 319 (329)
T 3gbz_A 263 PGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEH 319 (329)
T ss_dssp TTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred hhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCC
Confidence 00000 00000000011112245688999999999999999999999875
No 165
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=1.9e-41 Score=356.47 Aligned_cols=250 Identities=20% Similarity=0.268 Sum_probs=193.3
Q ss_pred hhccccc-cccCccCcccEEEEEeC-CCCeEEEEEeehhhHHHHHHHHHHHHHHhhc-CCCCcceeeeeeec----CCce
Q 007680 271 TDEFNEC-NLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLERAFRSFDSECEVLRNV-RHRNLIKILSSYSN----PDFK 343 (593)
Q Consensus 271 ~~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~----~~~~ 343 (593)
.++|.+. +.||+|+||.||+|.+. +|+.||||+++.. ..+.+|+.++.++ +||||+++++++.. .+..
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~ 134 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 134 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEE
Confidence 4567776 68999999999999976 7899999999743 3466788887544 89999999998875 5678
Q ss_pred EEEEeccCCCCHHHHHhhCCC-CCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCC---CCcEEEEeecc
Q 007680 344 ALVLEFMPNGSLEKWLYSHNY-FLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDE---NMVAHVSDFGI 419 (593)
Q Consensus 344 ~lv~e~~~~gsL~~~l~~~~~-~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~---~~~~kL~Dfg~ 419 (593)
++||||+++|+|.+++..... .+++.++..++.||+.||+|||+++ |+||||||+||+++. ++.+||+|||+
T Consensus 135 ~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~----ivHrDlkp~Nill~~~~~~~~~kl~DFG~ 210 (400)
T 1nxk_A 135 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN----IAHRDVKPENLLYTSKRPNAILKLTDFGF 210 (400)
T ss_dssp EEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTT----EECCCCCGGGEEESSSSTTCCEEECCCTT
T ss_pred EEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC----ccccCcCcceEEEecCCCCccEEEEeccc
Confidence 999999999999999987543 5899999999999999999999654 999999999999997 78999999999
Q ss_pred ceecCCCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccc--hHHHHHHHhcCCch
Q 007680 420 YKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEM--SLRRWVKESLPHGL 497 (593)
Q Consensus 420 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~--~~~~~~~~~~~~~~ 497 (593)
++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||........ .....+......
T Consensus 211 a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~-- 285 (400)
T 1nxk_A 211 AKETTSHN---SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE-- 285 (400)
T ss_dssp CEECC--------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCC--
T ss_pred ccccCCCC---ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCccc--
Confidence 98764322 22345689999999999999999999999999999999999999976432111 111111110000
Q ss_pred hhhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 498 TEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 498 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
........++.++.+++.+||+.||++|||+.|+++|
T Consensus 286 ------------~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 286 ------------FPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp ------------CCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ------------CCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0001112346688999999999999999999999987
No 166
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=2.2e-41 Score=367.23 Aligned_cols=252 Identities=24% Similarity=0.334 Sum_probs=209.0
Q ss_pred hhhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhh---HHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEE
Q 007680 270 ATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKAL 345 (593)
Q Consensus 270 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 345 (593)
..++|++.+.||+|+||.||+|+.. +|+.||+|++.... ......+.+|++++++++||||+++++++.+.+..++
T Consensus 182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l 261 (576)
T 2acx_A 182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCL 261 (576)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEE
Confidence 3568999999999999999999975 79999999998653 2334568899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCC-CCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecC
Q 007680 346 VLEFMPNGSLEKWLYSHNY-FLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLG 424 (593)
Q Consensus 346 v~e~~~~gsL~~~l~~~~~-~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~ 424 (593)
||||++||+|.+++..... .+++..+..++.||+.||+|||+++ |+||||||+||+++.++.+||+|||+++...
T Consensus 262 VmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~g----IvHrDLKPeNILld~~g~vKL~DFGla~~~~ 337 (576)
T 2acx_A 262 VLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRER----IVYRDLKPENILLDDHGHIRISDLGLAVHVP 337 (576)
T ss_dssp EECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTT----EECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC----EeccCCchheEEEeCCCCeEEEecccceecc
Confidence 9999999999999977543 5899999999999999999999654 9999999999999999999999999998775
Q ss_pred CCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCcccccc--chHHHHHHHhcCCchhhhhh
Q 007680 425 EGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGE--MSLRRWVKESLPHGLTEVVD 502 (593)
Q Consensus 425 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 502 (593)
.... .....||+.|+|||++.+..++.++|||||||++|||++|+.||....... ......+.. .+..
T Consensus 338 ~~~~---~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~-~~~~------ 407 (576)
T 2acx_A 338 EGQT---IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE-VPEE------ 407 (576)
T ss_dssp TTCC---EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHH-CCCC------
T ss_pred cCcc---ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhc-cccc------
Confidence 4332 233579999999999999899999999999999999999999997642211 111111111 0100
Q ss_pred hhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCC-----CHHHHHHH
Q 007680 503 ANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRI-----NMTDAAAK 546 (593)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 546 (593)
.+..+++++.+++.+||+.||++|| +++|+++|
T Consensus 408 -----------~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 408 -----------YSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp -----------CCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred -----------CCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 0122456789999999999999999 78999876
No 167
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=2.3e-41 Score=342.70 Aligned_cols=251 Identities=25% Similarity=0.320 Sum_probs=204.1
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhhHHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEEEec
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVLEF 349 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 349 (593)
.++|.+.+.||+|+||.||+|+.. +|+.||+|+++.......+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL 87 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence 568999999999999999999975 7999999999866544456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeee---CCCCcEEEEeeccceecCCC
Q 007680 350 MPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILL---DENMVAHVSDFGIYKLLGEG 426 (593)
Q Consensus 350 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll---~~~~~~kL~Dfg~a~~~~~~ 426 (593)
+++++|.+++...+. +++..+..++.|++.||+|||+++ |+||||||+||++ +.++.+||+|||++......
T Consensus 88 ~~~~~L~~~l~~~~~-~~~~~~~~~~~qi~~~l~~lH~~~----i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~ 162 (304)
T 2jam_A 88 VSGGELFDRILERGV-YTEKDASLVIQQVLSAVKYLHENG----IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG 162 (304)
T ss_dssp CCSCBHHHHHHHHSC-CCHHHHHHHHHHHHHHHHHHHHTT----CCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB
T ss_pred CCCccHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCC----ccccCCCHHHEEEecCCCCCCEEEccCCcceecCCC
Confidence 999999999876554 899999999999999999999654 9999999999999 78899999999998754322
Q ss_pred CCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhhhhhh
Q 007680 427 EDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLV 506 (593)
Q Consensus 427 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (593)
......|++.|+|||++.+..++.++||||||+++|+|++|+.||...... .....+.......
T Consensus 163 ----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~i~~~~~~~---------- 226 (304)
T 2jam_A 163 ----IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETES--KLFEKIKEGYYEF---------- 226 (304)
T ss_dssp ----TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHHHHCCCCC----------
T ss_pred ----ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH--HHHHHHHcCCCCC----------
Confidence 123346899999999999999999999999999999999999999763211 1111111111000
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 507 REEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 507 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
..+....++.++.+++.+||+.||++|||+.|+++|
T Consensus 227 ----~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 227 ----ESPFWDDISESAKDFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp ----CTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred ----CccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 001112345678999999999999999999999985
No 168
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8e-41 Score=347.85 Aligned_cols=262 Identities=22% Similarity=0.267 Sum_probs=197.3
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehh--hHHHHHHHHHHHHHHhhcCCCCcceeeeeeecCC------
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQ--LERAFRSFDSECEVLRNVRHRNLIKILSSYSNPD------ 341 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 341 (593)
.++|++.+.||+|+||.||+|.+. +|+.||||++... .....+.+.+|++++++++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 467999999999999999999975 7999999998543 2344567889999999999999999999987653
Q ss_pred ceEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccce
Q 007680 342 FKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYK 421 (593)
Q Consensus 342 ~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~ 421 (593)
..++||||+ +++|.+++.... +++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~~--l~~~~~~~~~~qi~~~L~~LH~~~----ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 176 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKHEK--LGEDRIQFLVYQMLKGLRYIHAAG----IIHRDLKPGNLAVNEDCELKILDFGLAR 176 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHHCC--CCHHHHHHHHHHHHHHHHHHHHTT----EECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred eEEEEEecC-CCCHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCC----ccccCcCHHHEEEcCCCCEEEEeeeccc
Confidence 469999999 889999998743 899999999999999999999655 9999999999999999999999999998
Q ss_pred ecCCCCCccccccccCCccccCccccCC-CCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhh
Q 007680 422 LLGEGEDSVRQTMTMATIGYMAPEYGLE-GIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEV 500 (593)
Q Consensus 422 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (593)
..... .....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.... .....+.........+.
T Consensus 177 ~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--~~l~~i~~~~g~~~~~~ 249 (367)
T 1cm8_A 177 QADSE-----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHL--DQLKEIMKVTGTPPAEF 249 (367)
T ss_dssp ECCSS-----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHHHCCCCHHH
T ss_pred ccccc-----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHhcCCCCHHH
Confidence 75432 233568999999998877 67999999999999999999999999763221 11111111111000010
Q ss_pred hhh---hhhhh---------hhh-hhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 501 VDA---NLVRE---------EQA-FSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 501 ~~~---~~~~~---------~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
... ..... ... .......++.+.+++.+||..||++|||+.|+++|
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h 308 (367)
T 1cm8_A 250 VQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 308 (367)
T ss_dssp HHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence 000 00000 000 00112345688999999999999999999999986
No 169
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=3.9e-41 Score=337.55 Aligned_cols=247 Identities=24% Similarity=0.319 Sum_probs=205.7
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhhH---HHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEE
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLE---RAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALV 346 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 346 (593)
.++|++.+.||+|+||.||+|+.. +++.||+|++..... ...+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 468999999999999999999976 678999999976532 2346788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCCC
Q 007680 347 LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEG 426 (593)
Q Consensus 347 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~ 426 (593)
|||+++++|.+++...+. +++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++......
T Consensus 93 ~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~qi~~~l~~lH~~----~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~ 167 (284)
T 2vgo_A 93 LEFAPRGELYKELQKHGR-FDEQRSATFMEELADALHYCHER----KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL 167 (284)
T ss_dssp ECCCTTEEHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHTT----TEECCCCSGGGEEECTTCCEEECCCTTCEECSSS
T ss_pred EEeCCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHC----CceecCCCHHHEEEcCCCCEEEecccccccCccc
Confidence 999999999999987654 89999999999999999999954 5999999999999999999999999998765432
Q ss_pred CCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhhhhhh
Q 007680 427 EDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLV 506 (593)
Q Consensus 427 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (593)
. .....|++.|+|||++.+..++.++||||||+++|+|++|+.||......+ ....+... ..
T Consensus 168 ~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~~~~~-----------~~- 229 (284)
T 2vgo_A 168 R----RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE--THRRIVNV-----------DL- 229 (284)
T ss_dssp C----BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH--HHHHHHTT-----------CC-
T ss_pred c----cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhH--HHHHHhcc-----------cc-
Confidence 2 233568999999999999999999999999999999999999997632111 11111100 00
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 507 REEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 507 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
..+..++.++.+++.+||+.||++|||+.|+++|
T Consensus 230 ------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h 263 (284)
T 2vgo_A 230 ------KFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEH 263 (284)
T ss_dssp ------CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred ------CCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence 0011235578999999999999999999999986
No 170
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=2.3e-41 Score=347.16 Aligned_cols=268 Identities=24% Similarity=0.279 Sum_probs=202.5
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhh--HHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEEE
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVL 347 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 347 (593)
.++|++.+.||+|+||.||+|+.. +|+.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 103 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF 103 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence 568999999999999999999976 58999999986542 334566889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCCCC
Q 007680 348 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGE 427 (593)
Q Consensus 348 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~ 427 (593)
||+++++|.+++.... .+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++.......
T Consensus 104 e~~~~~~l~~~~~~~~-~~~~~~~~~~~~qi~~~l~~LH~~~----ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 178 (331)
T 4aaa_A 104 EFVDHTILDDLELFPN-GLDYQVVQKYLFQIINGIGFCHSHN----IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG 178 (331)
T ss_dssp ECCSEEHHHHHHHSTT-CCCHHHHHHHHHHHHHHHHHHHHTT----CCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred ecCCcchHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHHHCC----EEccCcChheEEEcCCCcEEEEeCCCceeecCCc
Confidence 9999988888866554 4999999999999999999999654 9999999999999999999999999998765432
Q ss_pred CccccccccCCccccCccccCCC-CCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHh--cCCchhhhhhh-
Q 007680 428 DSVRQTMTMATIGYMAPEYGLEG-IVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKES--LPHGLTEVVDA- 503 (593)
Q Consensus 428 ~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~- 503 (593)
. ......+++.|+|||++.+. .++.++|||||||++|+|++|+.||......+ ......... ...........
T Consensus 179 ~--~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 255 (331)
T 4aaa_A 179 E--VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDID-QLYHIMMCLGNLIPRHQELFNKN 255 (331)
T ss_dssp -------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCSCCHHHHHHHHHC
T ss_pred c--ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHHHhCCCChhhhhHhhhc
Confidence 2 22345689999999998775 78999999999999999999999997643221 111111100 00000000000
Q ss_pred ---------hhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 504 ---------NLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 504 ---------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
..............+++.+.+++.+||+.||++|||+.|+++|
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 256 PVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp GGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred cccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0000000111112356789999999999999999999999986
No 171
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=4.9e-43 Score=354.43 Aligned_cols=269 Identities=21% Similarity=0.339 Sum_probs=191.6
Q ss_pred hhccccccccCccCcccEEEEEeCCCCeEEEEEeehhhHHHHHHHHHHHHHHhh--cCCCCcceeeeeeecCC----ceE
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRN--VRHRNLIKILSSYSNPD----FKA 344 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~----~~~ 344 (593)
.++|++.+.||+|+||.||+|++. |+.||||+++... ...+.+|.+++.. ++||||+++++++...+ ..+
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 77 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 77 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-TT---HHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEE
T ss_pred cceeeehhhccCCCCeEEEEEEEc-CcceEEEEecccc---hhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeE
Confidence 468999999999999999999874 8999999987543 3456778888887 79999999999998776 789
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcC----CCCCeEecCCCCCCeeeCCCCcEEEEeeccc
Q 007680 345 LVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGH----SSVHIIHCDLKPTNILLDENMVAHVSDFGIY 420 (593)
Q Consensus 345 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~----~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 420 (593)
+||||+++|+|.+++.... +++..+..++.|++.||+|||... .+.+|+||||||+||+++.++.+||+|||++
T Consensus 78 lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~DFg~a 155 (303)
T 3gxj_A 78 LVSDYHEHGSLFDYLNRYT--VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 155 (303)
T ss_dssp EEEECCTTCCHHHHHHHCC--BCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCCCCC-
T ss_pred EEEeccCCCCHHHHHhccC--cchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEeecCcc
Confidence 9999999999999997654 788899999999999999999210 0234999999999999999999999999999
Q ss_pred eecCCCCCcc--ccccccCCccccCccccCCC------CCCccchHHHHHHHHHHHHhC----------CCCCCcccccc
Q 007680 421 KLLGEGEDSV--RQTMTMATIGYMAPEYGLEG------IVSAKCDVYSYGVLLMETFTR----------KRPTDEMFIGE 482 (593)
Q Consensus 421 ~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~s~~~DvwSlGvvl~elltg----------~~pf~~~~~~~ 482 (593)
.......... ......||+.|+|||++.+. .++.++|||||||++|||++| ..||.......
T Consensus 156 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~~ 235 (303)
T 3gxj_A 156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 235 (303)
T ss_dssp CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-C
T ss_pred eeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCCCC
Confidence 7765443221 12334699999999998776 445789999999999999999 56664432111
Q ss_pred chHHHHHHHhcCCchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhh
Q 007680 483 MSLRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVK 553 (593)
Q Consensus 483 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 553 (593)
...... ...+................+++..+.+++.+||+.||++|||+.|+++.|+++...
T Consensus 236 ~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~ 298 (303)
T 3gxj_A 236 PSVEEM--------RKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp CCCC-C--------HHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC
T ss_pred ccHHHH--------HHHHHHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhh
Confidence 110000 111111111111111112235667899999999999999999999999999988643
No 172
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=4.6e-41 Score=342.06 Aligned_cols=252 Identities=26% Similarity=0.328 Sum_probs=202.7
Q ss_pred hhhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhhHHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEEEe
Q 007680 270 ATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVLE 348 (593)
Q Consensus 270 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 348 (593)
..++|++.+.||+|+||.||+|... +|+.||+|++.... ..+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 104 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME 104 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence 4578999999999999999999976 68999999997653 34678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCCCCC
Q 007680 349 FMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGED 428 (593)
Q Consensus 349 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~ 428 (593)
|+++++|.+++......+++..+..++.|++.||.|||+++ ++|+||||+||+++.++.+||+|||.+........
T Consensus 105 ~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~----i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 180 (314)
T 3com_A 105 YCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMR----KIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMA 180 (314)
T ss_dssp CCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT----EECCCCSGGGEEECTTCCEEECCCTTCEECBTTBS
T ss_pred cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC----CcCCCcCHHHEEECCCCCEEEeecccchhhhhhcc
Confidence 99999999999865556999999999999999999999654 99999999999999999999999999987654322
Q ss_pred ccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhhhhhhhh
Q 007680 429 SVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLVRE 508 (593)
Q Consensus 429 ~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 508 (593)
......|++.|+|||++.+..++.++||||||+++|+|++|+.||....... .........+.
T Consensus 181 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~~~------------- 243 (314)
T 3com_A 181 --KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMR--AIFMIPTNPPP------------- 243 (314)
T ss_dssp --CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHHHHHSCCC-------------
T ss_pred --ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHH--HHHHHhcCCCc-------------
Confidence 2234568999999999999999999999999999999999999997632211 11111111100
Q ss_pred hhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 509 EQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 509 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
....+..++..+.+++.+||+.||++|||+.++++|
T Consensus 244 --~~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~ 279 (314)
T 3com_A 244 --TFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQH 279 (314)
T ss_dssp --CCSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred --ccCCcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 001112235678999999999999999999999875
No 173
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=2.8e-41 Score=347.06 Aligned_cols=249 Identities=20% Similarity=0.281 Sum_probs=207.2
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhh---HHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEE
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALV 346 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 346 (593)
.++|.+.+.||+|+||.||++.+. +++.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 468999999999999999999976 58899999997652 34556789999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCCC
Q 007680 347 LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEG 426 (593)
Q Consensus 347 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~ 426 (593)
|||+++++|.+++..... +++.++..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++......
T Consensus 120 ~e~~~~~~L~~~~~~~~~-l~~~~~~~i~~qi~~aL~~LH~~~----ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 194 (335)
T 2owb_A 120 LELCRRRSLLELHKRRKA-LTEPEARYYLRQIVLGCQYLHRNR----VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 194 (335)
T ss_dssp ECCCTTCBHHHHHHHHCS-CCHHHHHHHHHHHHHHHHHHHHTT----EECSCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred EecCCCCCHHHHHhccCC-CCHHHHHHHHHHHHHHHHHHHHCC----CEecCCCchhEEEcCCCCEEEeeccCceecccC
Confidence 999999999999877554 899999999999999999999654 999999999999999999999999999876533
Q ss_pred CCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhhhhhh
Q 007680 427 EDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLV 506 (593)
Q Consensus 427 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (593)
.. ......|++.|+|||++.+..++.++||||||+++|||++|+.||......+ ....+....
T Consensus 195 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~~~~~~------------- 257 (335)
T 2owb_A 195 GE--RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE--TYLRIKKNE------------- 257 (335)
T ss_dssp TC--CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH--HHHHHHHTC-------------
T ss_pred cc--cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHH--HHHHHhcCC-------------
Confidence 22 2234568999999999999899999999999999999999999997632111 111111000
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 507 REEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 507 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
...+..++..+.+++.+||+.||++|||+.|++++
T Consensus 258 -----~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 258 -----YSIPKHINPVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp -----CCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred -----CCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 00111234578999999999999999999999986
No 174
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.8e-41 Score=356.62 Aligned_cols=276 Identities=23% Similarity=0.278 Sum_probs=213.4
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhh-HHHHHHHHHHHHHHhhcCCCCcceeeeeeecCC--ceEEE
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSYSNPD--FKALV 346 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lv 346 (593)
.++|++.+.||+|+||.||+|++. +|+.||||+++... ....+.+.+|++++++++||||+++++++...+ ..++|
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv 87 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEE
Confidence 467999999999999999999976 58999999998643 234567789999999999999999999988765 77999
Q ss_pred EeccCCCCHHHHHhhCCC--CCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeee----CCCCcEEEEeeccc
Q 007680 347 LEFMPNGSLEKWLYSHNY--FLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILL----DENMVAHVSDFGIY 420 (593)
Q Consensus 347 ~e~~~~gsL~~~l~~~~~--~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll----~~~~~~kL~Dfg~a 420 (593)
|||+++|+|.+++..... .+++..+..++.|++.||+|||+++ |+||||||+||++ +.++.+||+|||++
T Consensus 88 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~----ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a 163 (396)
T 4eut_A 88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG----IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA 163 (396)
T ss_dssp ECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT----EECCCCCGGGEEEEECTTSCEEEEECCGGGC
T ss_pred EecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCC----EEECCcCHHHEEEeecCCCceeEEEecCCCc
Confidence 999999999999976543 3899999999999999999999654 9999999999999 77888999999999
Q ss_pred eecCCCCCccccccccCCccccCccccCC--------CCCCccchHHHHHHHHHHHHhCCCCCCccccccc--hHHHHHH
Q 007680 421 KLLGEGEDSVRQTMTMATIGYMAPEYGLE--------GIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEM--SLRRWVK 490 (593)
Q Consensus 421 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~--~~~~~~~ 490 (593)
+...... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ .....+.
T Consensus 164 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~ 240 (396)
T 4eut_A 164 RELEDDE---QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKII 240 (396)
T ss_dssp EECCCGG---GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHH
T ss_pred eEccCCC---ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHh
Confidence 8765432 2234568999999998764 5678899999999999999999999975432221 1111122
Q ss_pred HhcCCc-hhhhh---hhhhhhh---hhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhh
Q 007680 491 ESLPHG-LTEVV---DANLVRE---EQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVK 553 (593)
Q Consensus 491 ~~~~~~-~~~~~---~~~~~~~---~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 553 (593)
...+.. ..... ...+... .........++..+.+++.+||+.||++||++.|+++.++++...
T Consensus 241 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 241 TGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp HSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred cCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 222211 11000 0000000 001112245677899999999999999999999999999888654
No 175
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=8.6e-41 Score=355.33 Aligned_cols=275 Identities=21% Similarity=0.257 Sum_probs=201.4
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehh--hHHHHHHHHHHHHHHhhcCCCCcceeeeeeecC-----Cc
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQ--LERAFRSFDSECEVLRNVRHRNLIKILSSYSNP-----DF 342 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~ 342 (593)
.++|++.+.||+|+||.||+|++. +++.||||+++.. .....+.+.+|++++++++||||+++++++... +.
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 568999999999999999999975 6889999999753 234556889999999999999999999999766 57
Q ss_pred eEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeecccee
Q 007680 343 KALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKL 422 (593)
Q Consensus 343 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~ 422 (593)
.|+||||++ ++|.+++.... .+++..+..++.||+.||+|||+++ |+||||||+||+++.++.+||+|||+++.
T Consensus 105 ~~lv~e~~~-~~L~~~~~~~~-~l~~~~~~~i~~qil~aL~~LH~~g----ivHrDlkp~NILl~~~~~~kL~DFGla~~ 178 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKTPI-FLTEEHIKTILYNLLLGENFIHESG----IIHRDLKPANCLLNQDCSVKVCDFGLART 178 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSSC-CCCHHHHHHHHHHHHHHHHHHHHTT----EECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEEecCC-cCHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHCC----CCCCCCCHHHeEECCCCCEEEccCCCccc
Confidence 899999995 59999997754 4999999999999999999999654 99999999999999999999999999998
Q ss_pred cCCCCCc--------------------cccccccCCccccCcccc-CCCCCCccchHHHHHHHHHHHHhCCCCCCccccc
Q 007680 423 LGEGEDS--------------------VRQTMTMATIGYMAPEYG-LEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIG 481 (593)
Q Consensus 423 ~~~~~~~--------------------~~~~~~~gt~~y~aPE~~-~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~ 481 (593)
....... .......||+.|+|||++ .+..++.++||||+||++|||++|..||.....+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~ 258 (432)
T 3n9x_A 179 INSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTN 258 (432)
T ss_dssp C-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGG
T ss_pred ccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccccccccc
Confidence 7543221 112456789999999985 5667999999999999999999866555432110
Q ss_pred c--------------------------chHHHHHHHhcCCchhhhh----hhhhhhh--------h-hhhhhhHHHHHHH
Q 007680 482 E--------------------------MSLRRWVKESLPHGLTEVV----DANLVRE--------E-QAFSAKMDCILSI 522 (593)
Q Consensus 482 ~--------------------------~~~~~~~~~~~~~~~~~~~----~~~~~~~--------~-~~~~~~~~~~~~l 522 (593)
. ......+.........+.+ ....... . ........+++++
T Consensus 259 ~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 338 (432)
T 3n9x_A 259 RFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDG 338 (432)
T ss_dssp CCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHH
T ss_pred ccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHH
Confidence 0 0000001110000000000 0000000 0 0000112346788
Q ss_pred HHHHhhcccCCCCCCCCHHHHHHH--HHHhh
Q 007680 523 MDFALDCCMESPDMRINMTDAAAK--LKKIK 551 (593)
Q Consensus 523 ~~li~~cl~~dP~~RPs~~evl~~--L~~i~ 551 (593)
.+|+.+||+.||++|||++|+++| ++++.
T Consensus 339 ~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~ 369 (432)
T 3n9x_A 339 INLLESMLKFNPNKRITIDQALDHPYLKDVR 369 (432)
T ss_dssp HHHHHHHSCSSTTTSCCHHHHHTCGGGTTTC
T ss_pred HHHHHHHhcCCcccCCCHHHHhcChhhhhcc
Confidence 999999999999999999999987 55543
No 176
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=3.1e-41 Score=351.01 Aligned_cols=255 Identities=16% Similarity=0.113 Sum_probs=206.4
Q ss_pred HhhhccccccccCccCcccEEEEE------eCCCCeEEEEEeehhhHHHHHHHHHHHHHHhhcC---CCCcceeeeeeec
Q 007680 269 RATDEFNECNLLGTSSFGSVYKGT------ISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVR---HRNLIKILSSYSN 339 (593)
Q Consensus 269 ~~~~~~~~~~~lg~G~~g~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~ 339 (593)
...++|.+.+.||+|+||.||+|. ..+++.||+|+++.... ..+..|+++++.++ |+||+++++++..
T Consensus 62 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~ 138 (365)
T 3e7e_A 62 LGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANP---WEFYIGTQLMERLKPSMQHMFMKFYSAHLF 138 (365)
T ss_dssp CSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCCH---HHHHHHHHHHHHSCGGGGGGBCCEEEEEEC
T ss_pred ECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCCh---hHHHHHHHHHHHhhhhhhhhhhhhheeeec
Confidence 345789999999999999999994 34789999999976533 35677777777775 9999999999999
Q ss_pred CCceEEEEeccCCCCHHHHHhh----CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCC-------
Q 007680 340 PDFKALVLEFMPNGSLEKWLYS----HNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDE------- 408 (593)
Q Consensus 340 ~~~~~lv~e~~~~gsL~~~l~~----~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~------- 408 (593)
.+..++||||+++|+|.+++.. ....+++..+..++.|++.||+|||++ +|+||||||+|||++.
T Consensus 139 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~----~ivHrDiKp~NIll~~~~~~~~~ 214 (365)
T 3e7e_A 139 QNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC----EIIHGDIKPDNFILGNGFLEQDD 214 (365)
T ss_dssp SSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT----TEECCCCSGGGEEECGGGTCC--
T ss_pred CCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC----CeecCCCCHHHEEecccccCccc
Confidence 9999999999999999999975 234599999999999999999999954 5999999999999998
Q ss_pred ----CCcEEEEeeccceecCCCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccch
Q 007680 409 ----NMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMS 484 (593)
Q Consensus 409 ----~~~~kL~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~ 484 (593)
++.+||+|||+++.+.............||+.|+|||++.+..++.++|||||||++|||+||+.||.....+...
T Consensus 215 ~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~ 294 (365)
T 3e7e_A 215 EDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECK 294 (365)
T ss_dssp ----CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEEE
T ss_pred cccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCcee
Confidence 8999999999998765433333445567999999999999999999999999999999999999999653221110
Q ss_pred HHHHHHHhcCCchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCC-CCHHHHHHHHHHhhhhh
Q 007680 485 LRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMR-INMTDAAAKLKKIKVKF 554 (593)
Q Consensus 485 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R-Ps~~evl~~L~~i~~~~ 554 (593)
+....... ..++.+.+++..|++.+|.+| |+++++.+.|+++....
T Consensus 295 ----------------~~~~~~~~--------~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~~ 341 (365)
T 3e7e_A 295 ----------------PEGLFRRL--------PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQH 341 (365)
T ss_dssp ----------------ECSCCTTC--------SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHHH
T ss_pred ----------------echhcccc--------CcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHHh
Confidence 00000000 113467889999999999999 57888888888876553
No 177
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=1.9e-41 Score=347.09 Aligned_cols=258 Identities=28% Similarity=0.429 Sum_probs=206.6
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeE--EEEEeehhh-HHHHHHHHHHHHHHhhc-CCCCcceeeeeeecCCceEE
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDV--AIKVFNLQL-ERAFRSFDSECEVLRNV-RHRNLIKILSSYSNPDFKAL 345 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~v--avK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 345 (593)
.++|++.+.||+|+||.||+|+.. ++..+ |+|.++... ....+.+.+|+++++++ +||||+++++++.+.+..++
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 103 (327)
T 1fvr_A 24 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 103 (327)
T ss_dssp GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEE
T ss_pred HHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEE
Confidence 468999999999999999999965 56644 999987532 33456789999999999 89999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCC---------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCC
Q 007680 346 VLEFMPNGSLEKWLYSHN---------------YFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENM 410 (593)
Q Consensus 346 v~e~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~ 410 (593)
||||+++++|.+++.... ..+++.++..++.|++.||+|||+++ |+||||||+||+++.++
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~----ivH~dlkp~NIl~~~~~ 179 (327)
T 1fvr_A 104 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ----FIHRDLAARNILVGENY 179 (327)
T ss_dssp EECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT----EECSCCSGGGEEECGGG
T ss_pred EEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC----ccCCCCccceEEEcCCC
Confidence 999999999999998754 35899999999999999999999654 99999999999999999
Q ss_pred cEEEEeeccceecCCCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccchHHHHH
Q 007680 411 VAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRRWV 489 (593)
Q Consensus 411 ~~kL~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~ellt-g~~pf~~~~~~~~~~~~~~ 489 (593)
.+||+|||+++...... ......+++.|+|||++.+..++.++||||||+++|||++ |+.||......+ ....+
T Consensus 180 ~~kL~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~--~~~~~ 254 (327)
T 1fvr_A 180 VAKIADFGLSRGQEVYV---KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE--LYEKL 254 (327)
T ss_dssp CEEECCTTCEESSCEEC---CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--HHHHG
T ss_pred eEEEcccCcCccccccc---cccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHH--HHHHh
Confidence 99999999987432211 2233456889999999988889999999999999999998 999997632111 11110
Q ss_pred HHhcCCchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhhh
Q 007680 490 KESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVKF 554 (593)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 554 (593)
... .....+..+++++.+++.+||+.||++|||+.|++++|+++....
T Consensus 255 ~~~-----------------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 302 (327)
T 1fvr_A 255 PQG-----------------YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER 302 (327)
T ss_dssp GGT-----------------CCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred hcC-----------------CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhh
Confidence 000 001111234567899999999999999999999999999987664
No 178
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=5.4e-41 Score=362.53 Aligned_cols=252 Identities=24% Similarity=0.322 Sum_probs=205.3
Q ss_pred hhhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhh--HHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEE
Q 007680 270 ATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALV 346 (593)
Q Consensus 270 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 346 (593)
..++|++.+.||+|+||.||+|+.. +++.||+|++.... ......+.+|++++++++||||+++++++.+.+..++|
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 99 (486)
T 3mwu_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (486)
T ss_dssp HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEE
Confidence 3578999999999999999999976 78999999997653 23456789999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeC---CCCcEEEEeeccceec
Q 007680 347 LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLD---ENMVAHVSDFGIYKLL 423 (593)
Q Consensus 347 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~---~~~~~kL~Dfg~a~~~ 423 (593)
|||+++|+|.+++..... +++.++..++.|++.||.|||+++ |+||||||+||+++ .++.+||+|||+++..
T Consensus 100 ~e~~~~~~L~~~~~~~~~-~~~~~~~~i~~qi~~al~~lH~~~----ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 174 (486)
T 3mwu_A 100 GELYTGGELFDEIIKRKR-FSEHDAARIIKQVFSGITYMHKHN----IVHRDLKPENILLESKEKDCDIKIIDFGLSTCF 174 (486)
T ss_dssp ECCCCSCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHTT----CCCSCCSGGGEEESSSSTTCCEEECSCSCTTTB
T ss_pred EEcCCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCC----eEeccCchHHEEEecCCCCCCEEEEECCcCeEC
Confidence 999999999999877654 999999999999999999999654 99999999999995 4567999999999866
Q ss_pred CCCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhhh
Q 007680 424 GEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDA 503 (593)
Q Consensus 424 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 503 (593)
.... ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||...... .....+......
T Consensus 175 ~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~i~~~~~~-------- 240 (486)
T 3mwu_A 175 QQNT---KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY--DILKRVETGKYA-------- 240 (486)
T ss_dssp CCC-------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHTCCC--------
T ss_pred CCCC---ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhCCCC--------
Confidence 5432 2234569999999999865 5999999999999999999999999763211 111111111000
Q ss_pred hhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 504 NLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
...+....+++++.+++.+||+.||++|||+.|+++|
T Consensus 241 ------~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 241 ------FDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp ------SCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred ------CCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0011122346688999999999999999999999987
No 179
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=6e-41 Score=337.48 Aligned_cols=263 Identities=22% Similarity=0.344 Sum_probs=210.6
Q ss_pred hhhcccccc-ccCccCcccEEEEEeC---CCCeEEEEEeehhh--HHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCce
Q 007680 270 ATDEFNECN-LLGTSSFGSVYKGTIS---DGTDVAIKVFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFK 343 (593)
Q Consensus 270 ~~~~~~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 343 (593)
..++|++.+ .||+|+||.||+|.+. +++.||+|+++... ....+.+.+|++++++++||||+++++++ ..+..
T Consensus 14 ~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~ 92 (291)
T 1xbb_A 14 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESW 92 (291)
T ss_dssp CGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSE
T ss_pred cchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCc
Confidence 356788888 9999999999999642 47889999997653 23456799999999999999999999998 56678
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceec
Q 007680 344 ALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLL 423 (593)
Q Consensus 344 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~ 423 (593)
++||||+++++|.+++..... +++.++..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++...
T Consensus 93 ~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~i~~qi~~~l~~LH~~~----i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~ 167 (291)
T 1xbb_A 93 MLVMEMAELGPLNKYLQQNRH-VKDKNIIELVHQVSMGMKYLEESN----FVHRDLAARNVLLVTQHYAKISDFGLSKAL 167 (291)
T ss_dssp EEEEECCTTEEHHHHHHHCTT-CCHHHHHHHHHHHHHHHHHHHHTT----EECSCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEEEEeCCCCCHHHHHHhCcC-CCHHHHHHHHHHHHHHHHHHHhCC----eEcCCCCcceEEEeCCCcEEEccCCcceee
Confidence 999999999999999987654 999999999999999999999654 999999999999999999999999999877
Q ss_pred CCCCCccc-cccccCCccccCccccCCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccchHHHHHHHhcCCchhhhh
Q 007680 424 GEGEDSVR-QTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRRWVKESLPHGLTEVV 501 (593)
Q Consensus 424 ~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 501 (593)
........ .....+++.|+|||++.+..++.++||||||+++|||++ |+.||...... .....+.....
T Consensus 168 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~~~~~~~~------- 238 (291)
T 1xbb_A 168 RADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--EVTAMLEKGER------- 238 (291)
T ss_dssp CTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHHHHHTTCC-------
T ss_pred ccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH--HHHHHHHcCCC-------
Confidence 55433221 223346788999999988889999999999999999999 99999764221 11121111110
Q ss_pred hhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhhhcch
Q 007680 502 DANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVKFLDD 557 (593)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 557 (593)
...+..++..+.+++.+||+.||++||++.++++.|+++......+
T Consensus 239 ----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~ 284 (291)
T 1xbb_A 239 ----------MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVNE 284 (291)
T ss_dssp ----------CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHHHH
T ss_pred ----------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhhc
Confidence 0111234568899999999999999999999999999987665433
No 180
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.9e-41 Score=349.91 Aligned_cols=271 Identities=26% Similarity=0.333 Sum_probs=201.4
Q ss_pred HHhhhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhhH-----HHHHHHHHHHHHHhhcCCCCcceeeeeeecCC
Q 007680 268 QRATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLE-----RAFRSFDSECEVLRNVRHRNLIKILSSYSNPD 341 (593)
Q Consensus 268 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 341 (593)
....++|++.+.||+|+||.||+|+.. +|+.||+|+++.... ...+.+.+|++++++++||||+++++++.+.+
T Consensus 6 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 85 (346)
T 1ua2_A 6 KSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKS 85 (346)
T ss_dssp -------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred HHHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCC
Confidence 344678999999999999999999975 689999999975421 12346789999999999999999999999999
Q ss_pred ceEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccce
Q 007680 342 FKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYK 421 (593)
Q Consensus 342 ~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~ 421 (593)
..++||||+++ +|.+++......+++.++..++.|+++||+|||+++ |+||||||+||+++.++.+||+|||+++
T Consensus 86 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~----ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~ 160 (346)
T 1ua2_A 86 NISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHW----ILHRDLKPNNLLLDENGVLKLADFGLAK 160 (346)
T ss_dssp CCEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTT----CCCCCCCGGGEEECTTCCEEECCCGGGS
T ss_pred ceEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCC----EECCCCCHHHEEEcCCCCEEEEecccce
Confidence 99999999975 899999877667899999999999999999999655 9999999999999999999999999998
Q ss_pred ecCCCCCccccccccCCccccCccccCCC-CCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHh-cCC--ch
Q 007680 422 LLGEGEDSVRQTMTMATIGYMAPEYGLEG-IVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKES-LPH--GL 497 (593)
Q Consensus 422 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~-~~~--~~ 497 (593)
....... ......+|+.|+|||++.+. .++.++|||||||++|||++|.+||......+ .+....... .+. .+
T Consensus 161 ~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~-~~~~i~~~~~~~~~~~~ 237 (346)
T 1ua2_A 161 SFGSPNR--AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLD-QLTRIFETLGTPTEEQW 237 (346)
T ss_dssp TTTSCCC--CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCTTTS
T ss_pred eccCCcc--cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHH-HHHHHHHHcCCCChhhh
Confidence 7654322 22345689999999998664 58999999999999999999999997643211 122222111 110 00
Q ss_pred hhhh---hh---hhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 498 TEVV---DA---NLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 498 ~~~~---~~---~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
.... +. ..............++.++.+++.+||+.||++|||+.|+++|
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 238 PDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp SSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred hhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 0000 00 0000000001112345689999999999999999999999986
No 181
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=2.9e-41 Score=357.38 Aligned_cols=254 Identities=24% Similarity=0.316 Sum_probs=195.4
Q ss_pred HhhhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhh--------HHHHHHHHHHHHHHhhcCCCCcceeeeeeec
Q 007680 269 RATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQL--------ERAFRSFDSECEVLRNVRHRNLIKILSSYSN 339 (593)
Q Consensus 269 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 339 (593)
...++|.+.+.||+|+||.||+|... +++.||+|++.... ......+.+|+.++++++||||+++++++..
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 211 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 211 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence 34678999999999999999999865 68999999997642 1122357899999999999999999999754
Q ss_pred CCceEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCC---cEEEEe
Q 007680 340 PDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENM---VAHVSD 416 (593)
Q Consensus 340 ~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~---~~kL~D 416 (593)
+..++||||+++|+|.+++..... +++.++..++.|++.||+|||+++ |+||||||+||+++.++ .+||+|
T Consensus 212 -~~~~lv~e~~~~g~L~~~l~~~~~-~~~~~~~~i~~qi~~~l~~LH~~~----ivHrDlkp~NIll~~~~~~~~~kl~D 285 (419)
T 3i6u_A 212 -EDYYIVLELMEGGELFDKVVGNKR-LKEATCKLYFYQMLLAVQYLHENG----IIHRDLKPENVLLSSQEEDCLIKITD 285 (419)
T ss_dssp -SEEEEEEECCTTCBGGGGTSSSCC-CCHHHHHHHHHHHHHHHHHHHHTT----CCCSCCCGGGEEESSSSSSCCEEECC
T ss_pred -CceEEEEEcCCCCcHHHHHhccCC-CCHHHHHHHHHHHHHHHHHHHHCC----ccccCCChHhEEEecCCCcceEEEee
Confidence 557999999999999998876654 999999999999999999999654 99999999999997544 599999
Q ss_pred eccceecCCCCCccccccccCCccccCccccCC---CCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhc
Q 007680 417 FGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLE---GIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESL 493 (593)
Q Consensus 417 fg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~ 493 (593)
||+++...... ......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||....... .....+....
T Consensus 286 FG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~-~~~~~i~~~~ 361 (419)
T 3i6u_A 286 FGHSKILGETS---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV-SLKDQITSGK 361 (419)
T ss_dssp SSTTTSCC--------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSC-CHHHHHHTTC
T ss_pred cccceecCCCc---cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchH-HHHHHHhcCC
Confidence 99998765432 2234568999999999753 568899999999999999999999997642221 1222221111
Q ss_pred CCchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 494 PHGLTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
.... ......+++.+.+++.+||+.||++|||+.|+++|
T Consensus 362 ~~~~--------------~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 362 YNFI--------------PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp CCCC--------------HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCCC--------------chhhcccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 1000 01112345688999999999999999999999986
No 182
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=3.4e-41 Score=346.14 Aligned_cols=259 Identities=20% Similarity=0.237 Sum_probs=191.5
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhhHHHHHHHHHHHHHHhhcC-CCCcceeeeeee--------cC
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLERAFRSFDSECEVLRNVR-HRNLIKILSSYS--------NP 340 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~--------~~ 340 (593)
..+|++.+.||+|+||.||+|++. +++.||+|++........+.+.+|+.++.++. ||||+++++++. ..
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~ 106 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ 106 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence 458999999999999999999975 78999999997766666678899999999996 999999999984 33
Q ss_pred CceEEEEeccCCCCHHHHHhh--CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeec
Q 007680 341 DFKALVLEFMPNGSLEKWLYS--HNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFG 418 (593)
Q Consensus 341 ~~~~lv~e~~~~gsL~~~l~~--~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg 418 (593)
...++||||++ |+|.+++.. ....+++.++..++.|++.||+|||+++ .+|+||||||+||+++.++.+||+|||
T Consensus 107 ~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~--~~ivH~Dikp~NIl~~~~~~~kl~Dfg 183 (337)
T 3ll6_A 107 AEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQK--PPIIHRDLKVENLLLSNQGTIKLCDFG 183 (337)
T ss_dssp EEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSS--SCCBCCCCCGGGCEECTTSCEEBCCCT
T ss_pred ceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCC--CCEEEccCCcccEEECCCCCEEEecCc
Confidence 45799999995 799998865 3345999999999999999999999432 239999999999999999999999999
Q ss_pred cceecCCCCCcc----------ccccccCCccccCcccc---CCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchH
Q 007680 419 IYKLLGEGEDSV----------RQTMTMATIGYMAPEYG---LEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSL 485 (593)
Q Consensus 419 ~a~~~~~~~~~~----------~~~~~~gt~~y~aPE~~---~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~ 485 (593)
++.......... ......+|+.|+|||++ .+..++.++|||||||++|||++|+.||......
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~---- 259 (337)
T 3ll6_A 184 SATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL---- 259 (337)
T ss_dssp TCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC----------
T ss_pred cceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH----
Confidence 998765432211 11134589999999998 5667899999999999999999999999653211
Q ss_pred HHHHHHhcCCchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhhh
Q 007680 486 RRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVKF 554 (593)
Q Consensus 486 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 554 (593)
........ .......+..+.+++.+||+.||++|||+.|++++|+.+....
T Consensus 260 -~~~~~~~~-----------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~ 310 (337)
T 3ll6_A 260 -RIVNGKYS-----------------IPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAAR 310 (337)
T ss_dssp -------CC-----------------CCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred -HhhcCccc-----------------CCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence 01110000 0001112335789999999999999999999999999997654
No 183
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=1.3e-41 Score=339.83 Aligned_cols=252 Identities=28% Similarity=0.433 Sum_probs=201.1
Q ss_pred hhccccccccCccCcccEEEEEeCCCCeEEEEEeehhhHHHHHHHHHHHHHHhhcCCCCcceeeeeeecC-CceEEEEec
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNP-DFKALVLEF 349 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-~~~~lv~e~ 349 (593)
.++|++.+.||+|+||.||+|+.. |+.||+|+++... ..+.+.+|++++++++||||+++++++... +..++||||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 96 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 96 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEec
Confidence 578999999999999999999884 8899999997543 346789999999999999999999986554 578999999
Q ss_pred cCCCCHHHHHhhCCC-CCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCCCCC
Q 007680 350 MPNGSLEKWLYSHNY-FLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGED 428 (593)
Q Consensus 350 ~~~gsL~~~l~~~~~-~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~ 428 (593)
+++++|.+++..... .+++..+..++.|++.||+|||+++ ++||||||+||+++.++.+||+|||++.......
T Consensus 97 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~----i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~- 171 (278)
T 1byg_A 97 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN----FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ- 171 (278)
T ss_dssp CTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTT----CCCSCCSGGGEEECTTSCEEECCCCC---------
T ss_pred CCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCC----ccccCCCcceEEEeCCCcEEEeeccccccccccc-
Confidence 999999999976543 3789999999999999999999655 9999999999999999999999999987654322
Q ss_pred ccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccchHHHHHHHhcCCchhhhhhhhhhh
Q 007680 429 SVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLVR 507 (593)
Q Consensus 429 ~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 507 (593)
....+++.|+|||++.+..++.++||||||+++|||++ |+.||...... .....+....
T Consensus 172 ----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~--~~~~~~~~~~-------------- 231 (278)
T 1byg_A 172 ----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--DVVPRVEKGY-------------- 231 (278)
T ss_dssp --------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG--GHHHHHTTTC--------------
T ss_pred ----cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHhcCC--------------
Confidence 22357889999999988899999999999999999998 99999764221 1111111100
Q ss_pred hhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhh
Q 007680 508 EEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVK 553 (593)
Q Consensus 508 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 553 (593)
....+..+++.+.+++.+||+.||++|||+.|+++.|++++..
T Consensus 232 ---~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~ 274 (278)
T 1byg_A 232 ---KMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH 274 (278)
T ss_dssp ---CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ---CCCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhh
Confidence 0111123466889999999999999999999999999998754
No 184
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=1.4e-40 Score=344.06 Aligned_cols=269 Identities=21% Similarity=0.278 Sum_probs=204.6
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhh--HHHHHHHHHHHHHHhhcCCCCcceeeeeeec--------
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSYSN-------- 339 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-------- 339 (593)
.++|++.+.||+|+||.||+|+.. +|+.||+|++.... ......+.+|++++++++||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 468999999999999999999974 79999999986543 2234567899999999999999999999876
Q ss_pred CCceEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeecc
Q 007680 340 PDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGI 419 (593)
Q Consensus 340 ~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 419 (593)
.+..++||||+++ +|.+.+......+++.++..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~----ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 170 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNK----ILHRDMKAANVLITRDGVLKLADFGL 170 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTT----EECCCCSGGGEEECTTSCEEECCCTT
T ss_pred CceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC----eeCCCCCHHHEEEcCCCCEEEccchh
Confidence 3468999999965 888888776667999999999999999999999655 99999999999999999999999999
Q ss_pred ceecCCCCCc--cccccccCCccccCccccCC-CCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHH---hc
Q 007680 420 YKLLGEGEDS--VRQTMTMATIGYMAPEYGLE-GIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKE---SL 493 (593)
Q Consensus 420 a~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~---~~ 493 (593)
++.+...... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... ....+.. ..
T Consensus 171 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~--~~~~i~~~~~~~ 248 (351)
T 3mi9_A 171 ARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQH--QLALISQLCGSI 248 (351)
T ss_dssp CEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHHHHHHHHCCC
T ss_pred cccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHH--HHHHHHHHhCCC
Confidence 9876533221 22344568999999998876 458999999999999999999999998743221 1111111 11
Q ss_pred CCc-hhhhhhhhhhh----------hhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 494 PHG-LTEVVDANLVR----------EEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 494 ~~~-~~~~~~~~~~~----------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
+.. ........... ...........++.+.+++.+||+.||++|||++|+++|
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 249 TPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp CTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 111 11110000000 000000011124578999999999999999999999986
No 185
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=1.4e-40 Score=334.50 Aligned_cols=250 Identities=24% Similarity=0.329 Sum_probs=199.6
Q ss_pred hccccccccCccCcccEEEEEeC-CCCeEEEEEeehhh--HHHHHHHHHHHHHHhhcCCCCcceeeeeeec----CCceE
Q 007680 272 DEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSYSN----PDFKA 344 (593)
Q Consensus 272 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~ 344 (593)
..|.+.+.||+|+||.||+|.+. ++..||+|++.... ....+.+.+|+.++++++||||+++++++.. ....+
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 105 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV 105 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEE
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEE
Confidence 35788889999999999999975 68899999997643 4456788999999999999999999998865 35689
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeC-CCCcEEEEeeccceec
Q 007680 345 LVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLD-ENMVAHVSDFGIYKLL 423 (593)
Q Consensus 345 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~-~~~~~kL~Dfg~a~~~ 423 (593)
+||||+++++|.+++..... +++..+..++.|++.||+|||+++ .+|+||||||+||+++ .++.+||+|||++...
T Consensus 106 lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~qi~~~l~~lH~~~--~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~ 182 (290)
T 1t4h_A 106 LVTELMTSGTLKTYLKRFKV-MKIKVLRSWCRQILKGLQFLHTRT--PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182 (290)
T ss_dssp EEEECCCSCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHTSS--SCCCCSCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred EEEEecCCCCHHHHHHHccC-CCHHHHHHHHHHHHHHHHHHHcCC--CCEEECCCCHHHEEEECCCCCEEEeeCCCcccc
Confidence 99999999999999987544 899999999999999999999532 2399999999999998 7899999999999754
Q ss_pred CCCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhhh
Q 007680 424 GEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDA 503 (593)
Q Consensus 424 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 503 (593)
.... .....||+.|+|||++. +.++.++||||||+++|+|++|+.||.......... ........
T Consensus 183 ~~~~----~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~-~~~~~~~~--------- 247 (290)
T 1t4h_A 183 RASF----AKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIY-RRVTSGVK--------- 247 (290)
T ss_dssp CTTS----BEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHH-HHHTTTCC---------
T ss_pred cccc----cccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHH-HHHhccCC---------
Confidence 4322 23356899999999876 459999999999999999999999997632221111 11110000
Q ss_pred hhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 504 NLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
........++++.+++.+||+.||++|||+.|+++|
T Consensus 248 -------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 248 -------PASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp -------CGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred -------ccccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 001111224578999999999999999999999875
No 186
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=1.3e-40 Score=336.89 Aligned_cols=250 Identities=24% Similarity=0.357 Sum_probs=207.9
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhh-HHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEEEe
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVLE 348 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 348 (593)
.+.|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 100 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 100 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence 456999999999999999999865 78999999997653 3345788999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCCCCC
Q 007680 349 FMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGED 428 (593)
Q Consensus 349 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~ 428 (593)
|+++++|.+++... .+++..+..++.|++.||.|||+++ |+||||||+||+++.++.+||+|||.+........
T Consensus 101 ~~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~----i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 174 (303)
T 3a7i_A 101 YLGGGSALDLLEPG--PLDETQIATILREILKGLDYLHSEK----KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI 174 (303)
T ss_dssp CCTTEEHHHHHTTS--CCCHHHHHHHHHHHHHHHHHHHHTT----EECCCCSGGGEEECTTSCEEECCCTTCEECBTTBC
T ss_pred eCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC----CccCCCChheEEECCCCCEEEeecccceecCcccc
Confidence 99999999999764 4899999999999999999999654 99999999999999999999999999987654322
Q ss_pred ccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhhhhhhhh
Q 007680 429 SVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLVRE 508 (593)
Q Consensus 429 ~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 508 (593)
......|++.|+|||++.+..++.++||||||+++|+|++|+.||...... .....+....+..
T Consensus 175 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~------------ 238 (303)
T 3a7i_A 175 --KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM--KVLFLIPKNNPPT------------ 238 (303)
T ss_dssp --CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHHHHSCCCC------------
T ss_pred --ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHH--HHHHHhhcCCCCC------------
Confidence 223456899999999999999999999999999999999999999763221 1111111111100
Q ss_pred hhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHH
Q 007680 509 EQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKL 547 (593)
Q Consensus 509 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 547 (593)
....++..+.+++.+||+.||++|||+.|++++.
T Consensus 239 -----~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~ 272 (303)
T 3a7i_A 239 -----LEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHK 272 (303)
T ss_dssp -----CCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCH
T ss_pred -----CccccCHHHHHHHHHHcCCChhhCcCHHHHhhCh
Confidence 0112355789999999999999999999999874
No 187
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=1e-40 Score=361.23 Aligned_cols=254 Identities=22% Similarity=0.312 Sum_probs=207.0
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhhH---HHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEE
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLE---RAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALV 346 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 346 (593)
.++|++.+.||+|+||.||+|+.+ +|+.||+|+++.... .....+.+|++++++++||||+++++++.+.+..|+|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 478999999999999999999975 799999999986532 2346788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCC---CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceec
Q 007680 347 LEFMPNGSLEKWLYSHN---YFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLL 423 (593)
Q Consensus 347 ~e~~~~gsL~~~l~~~~---~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~ 423 (593)
|||++||+|.+++.... ..+++..+..++.||+.||+|||+++ |+||||||+||+++.++.+||+|||+++.+
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~g----IvHrDLKP~NILl~~~g~vkL~DFGla~~~ 339 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN----IIYRDLKPENVLLDDDGNVRISDLGLAVEL 339 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTT----EECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcC----CcccCCChHHEEEeCCCCEEEeecceeeec
Confidence 99999999999997643 35999999999999999999999654 999999999999999999999999999876
Q ss_pred CCCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhhh
Q 007680 424 GEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDA 503 (593)
Q Consensus 424 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 503 (593)
..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ......... ...
T Consensus 340 ~~~~~--~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~-~~~~~~~~i--------~~~ 408 (543)
T 3c4z_A 340 KAGQT--KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV-ENKELKQRV--------LEQ 408 (543)
T ss_dssp CTTCC--CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCC-CHHHHHHHH--------HHC
T ss_pred cCCCc--ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccch-hHHHHHHHH--------hhc
Confidence 54332 2233579999999999999999999999999999999999999997642211 111111100 000
Q ss_pred hhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCH-----HHHHHH
Q 007680 504 NLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINM-----TDAAAK 546 (593)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~-----~evl~~ 546 (593)
. ...+..++.++.+++.+||+.||++||++ .++++|
T Consensus 409 ~-------~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~H 449 (543)
T 3c4z_A 409 A-------VTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTH 449 (543)
T ss_dssp C-------CCCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTS
T ss_pred c-------cCCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcC
Confidence 0 00112345688999999999999999965 667654
No 188
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=6.5e-41 Score=336.73 Aligned_cols=253 Identities=22% Similarity=0.264 Sum_probs=190.1
Q ss_pred hhhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhh--HHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEE
Q 007680 270 ATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALV 346 (593)
Q Consensus 270 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 346 (593)
..++|++.+.||+|+||.||+|+.. +|+.||+|+++... ....+.+.++...++.++||||+++++++.+++..++|
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 84 (290)
T 3fme_A 5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 84 (290)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEE
T ss_pred cHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEE
Confidence 3578999999999999999999974 78999999997642 22334455566668888999999999999999999999
Q ss_pred EeccCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceec
Q 007680 347 LEFMPNGSLEKWLYS---HNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLL 423 (593)
Q Consensus 347 ~e~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~ 423 (593)
|||++ |+|.+++.. ....+++..+..++.|++.||+|||++ .+|+||||||+||+++.++.+||+|||++...
T Consensus 85 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 160 (290)
T 3fme_A 85 MELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK---LSVIHRDVKPSNVLINALGQVKMCDFGISGYL 160 (290)
T ss_dssp EECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---SCCCCCCCSGGGCEECTTCCEEBCCC------
T ss_pred Eehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhc---CCeecCCCCHHHEEECCCCCEEEeecCCcccc
Confidence 99997 588887754 344699999999999999999999975 14999999999999999999999999999876
Q ss_pred CCCCCccccccccCCccccCcccc----CCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhh
Q 007680 424 GEGEDSVRQTMTMATIGYMAPEYG----LEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTE 499 (593)
Q Consensus 424 ~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 499 (593)
.... ......||+.|+|||++ .+..++.++||||||+++|+|++|+.||..................+..
T Consensus 161 ~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~--- 234 (290)
T 3fme_A 161 VDDV---AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQL--- 234 (290)
T ss_dssp ------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCC---
T ss_pred cccc---cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCCCCc---
Confidence 5432 22334689999999995 5667899999999999999999999999753222222222222111110
Q ss_pred hhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 500 VVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
....++.++.+++.+||+.||++|||+.|+++|
T Consensus 235 --------------~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~h 267 (290)
T 3fme_A 235 --------------PADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 267 (290)
T ss_dssp --------------CTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred --------------ccccCCHHHHHHHHHHhhcChhhCcCHHHHHhC
Confidence 011235678999999999999999999999985
No 189
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=1.1e-40 Score=335.93 Aligned_cols=251 Identities=25% Similarity=0.332 Sum_probs=199.7
Q ss_pred ccccccccCccCcccEEEEEeC-CCCeEEEEEeehhhHHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEEEeccC
Q 007680 273 EFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMP 351 (593)
Q Consensus 273 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 351 (593)
+|.....||+|+||.||+|.+. +++.||+|.+........+.+.+|+.++++++||||+++++++...+..++||||++
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 102 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVP 102 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCC
Confidence 4455569999999999999964 688999999987655566789999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhCCC--CCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCC-CCcEEEEeeccceecCCCCC
Q 007680 352 NGSLEKWLYSHNY--FLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDE-NMVAHVSDFGIYKLLGEGED 428 (593)
Q Consensus 352 ~gsL~~~l~~~~~--~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~-~~~~kL~Dfg~a~~~~~~~~ 428 (593)
+++|.+++..... .+++..+..++.|++.||+|||+++ |+||||||+||+++. ++.+||+|||.+........
T Consensus 103 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~----i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~ 178 (295)
T 2clq_A 103 GGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ----IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP 178 (295)
T ss_dssp EEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTT----EECCCCSGGGEEEETTTCCEEECCTTTCEESCC---
T ss_pred CCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCC----EEccCCChhhEEEECCCCCEEEeecccccccCCCCC
Confidence 9999999987643 4678899999999999999999654 999999999999987 89999999999987654321
Q ss_pred ccccccccCCccccCccccCCCC--CCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhhhhhh
Q 007680 429 SVRQTMTMATIGYMAPEYGLEGI--VSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLV 506 (593)
Q Consensus 429 ~~~~~~~~gt~~y~aPE~~~~~~--~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (593)
......|++.|+|||++.+.. ++.++||||||+++|+|++|+.||....................
T Consensus 179 --~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~----------- 245 (295)
T 2clq_A 179 --CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHP----------- 245 (295)
T ss_dssp ----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCC-----------
T ss_pred --cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhccccccc-----------
Confidence 123456899999999987653 88999999999999999999999976322211111110000000
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 507 REEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 507 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
..+..++.++.+++.+||+.||++|||+.|++++
T Consensus 246 ------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~ 279 (295)
T 2clq_A 246 ------EIPESMSAEAKAFILKCFEPDPDKRACANDLLVD 279 (295)
T ss_dssp ------CCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred ------cccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0112345678999999999999999999999875
No 190
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=8.9e-41 Score=361.50 Aligned_cols=255 Identities=22% Similarity=0.309 Sum_probs=203.3
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhh--HHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEEE
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVL 347 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 347 (593)
.++|++.+.||+|+||.||+|+.+ +++.||+|+++... ......+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 115 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM 115 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 568999999999999999999976 78999999997653 233567889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCC---CcEEEEeeccceecC
Q 007680 348 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDEN---MVAHVSDFGIYKLLG 424 (593)
Q Consensus 348 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~---~~~kL~Dfg~a~~~~ 424 (593)
||+++|+|.+++..... +++..+..++.|++.||+|||+++ |+||||||+||+++.. +.+||+|||++....
T Consensus 116 e~~~~g~L~~~~~~~~~-~~~~~~~~i~~qi~~~l~~lH~~~----ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~ 190 (494)
T 3lij_A 116 ECYKGGELFDEIIHRMK-FNEVDAAVIIKQVLSGVTYLHKHN----IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE 190 (494)
T ss_dssp ECCCSCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHTT----EECSCCSGGGEEESCSSTTCCEEECCCTTCEECB
T ss_pred ecCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCC----ceeccCChhhEEEeCCCCCCcEEEEECCCCeECC
Confidence 99999999998877654 899999999999999999999654 9999999999999764 559999999998765
Q ss_pred CCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhhhh
Q 007680 425 EGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDAN 504 (593)
Q Consensus 425 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 504 (593)
... ......||+.|+|||++. +.++.++||||+||++|+|++|..||...... .....+.......
T Consensus 191 ~~~---~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~i~~~~~~~-------- 256 (494)
T 3lij_A 191 NQK---KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQ--EILRKVEKGKYTF-------- 256 (494)
T ss_dssp TTB---CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHTCCCC--------
T ss_pred CCc---cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhCCCCC--------
Confidence 433 223456999999999875 56999999999999999999999999764221 1111111111000
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH--HHHh
Q 007680 505 LVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK--LKKI 550 (593)
Q Consensus 505 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~--L~~i 550 (593)
..+....+++.+.+++.+||+.||++|||+.|+++| +++.
T Consensus 257 ------~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~~ 298 (494)
T 3lij_A 257 ------DSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEM 298 (494)
T ss_dssp ------CSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHHH
T ss_pred ------CchhcccCCHHHHHHHHHHCCCChhhCccHHHHhcCcccccC
Confidence 001112345678999999999999999999999987 5544
No 191
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=8.4e-41 Score=333.54 Aligned_cols=248 Identities=25% Similarity=0.406 Sum_probs=198.3
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhhH---HHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEE
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLE---RAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALV 346 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 346 (593)
.++|++.+.||+|+||.||+|.+. +|+.||+|++..... ...+.+.+|+.++++++||||+++++++...+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 468999999999999999999976 799999999976532 2356788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCCC
Q 007680 347 LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEG 426 (593)
Q Consensus 347 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~ 426 (593)
|||+++++|.+++..... +++..+..++.|++.||+|||+++ ++||||||+||+++.++.+||+|||++......
T Consensus 90 ~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~qi~~~l~~lH~~~----i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~ 164 (276)
T 2h6d_A 90 MEYVSGGELFDYICKHGR-VEEMEARRLFQQILSAVDYCHRHM----VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG 164 (276)
T ss_dssp EECCCSCBHHHHHHHHCS-CCHHHHHHHHHHHHHHHHHHHHHC----SSCCCCCGGGEEECTTSCEEECCCCGGGCCCC-
T ss_pred EeccCCCcHHHHHhccCC-CCHHHHHHHHHHHHHHHHHHHHCC----CccCCCChhhEEECCCCCEEEeecccccccCCC
Confidence 999999999999987654 899999999999999999999765 999999999999999999999999999876543
Q ss_pred CCccccccccCCccccCccccCCCCC-CccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhhhhh
Q 007680 427 EDSVRQTMTMATIGYMAPEYGLEGIV-SAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANL 505 (593)
Q Consensus 427 ~~~~~~~~~~gt~~y~aPE~~~~~~~-s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 505 (593)
. ......+++.|+|||.+.+..+ +.++||||||+++|+|++|+.||...... .....+.....
T Consensus 165 ~---~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~----------- 228 (276)
T 2h6d_A 165 E---FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVP--TLFKKIRGGVF----------- 228 (276)
T ss_dssp ---------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHCCC-----------
T ss_pred c---ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHH--HHHHHhhcCcc-----------
Confidence 2 1233468999999999887765 68999999999999999999999763211 11111111100
Q ss_pred hhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 506 VREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 506 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
..+..++..+.+++.+||+.||++|||+.|+++|
T Consensus 229 -------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 229 -------YIPEYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp -------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred -------cCchhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 0011234578999999999999999999999986
No 192
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.7e-41 Score=373.70 Aligned_cols=260 Identities=21% Similarity=0.368 Sum_probs=207.2
Q ss_pred hcccccc-ccCccCcccEEEEEeC---CCCeEEEEEeehhh-HHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEE
Q 007680 272 DEFNECN-LLGTSSFGSVYKGTIS---DGTDVAIKVFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALV 346 (593)
Q Consensus 272 ~~~~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 346 (593)
+++.+.+ .||+|+||.||+|.+. ++..||||+++... ....+.+.+|++++++++||||+++++++.. +..++|
T Consensus 335 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv 413 (613)
T 2ozo_A 335 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLV 413 (613)
T ss_dssp TSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEE
T ss_pred cceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEE
Confidence 4455555 7999999999999864 46679999997643 3345789999999999999999999999976 568999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCCC
Q 007680 347 LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEG 426 (593)
Q Consensus 347 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~ 426 (593)
|||+++|+|.+++......+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.+...
T Consensus 414 ~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~----iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~ 489 (613)
T 2ozo_A 414 MEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN----FVHRNLAARNVLLVNRHYAKISDFGLSKALGAD 489 (613)
T ss_dssp EECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTT----CCCSCCSGGGEEEEETTEEEECCCSTTTTCC--
T ss_pred EEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC----EEcCcCCHHHEEEcCCCcEEEeeccCcccccCC
Confidence 9999999999999877667999999999999999999999654 999999999999999999999999999876543
Q ss_pred CCcc-ccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccchHHHHHHHhcCCchhhhhhhh
Q 007680 427 EDSV-RQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDAN 504 (593)
Q Consensus 427 ~~~~-~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 504 (593)
.... ......+++.|+|||++.+..++.++|||||||++|||++ |+.||...... .....+....
T Consensus 490 ~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~--~~~~~i~~~~----------- 556 (613)
T 2ozo_A 490 DSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--EVMAFIEQGK----------- 556 (613)
T ss_dssp ------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH--HHHHHHHTTC-----------
T ss_pred CceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH--HHHHHHHcCC-----------
Confidence 3211 1122345688999999998999999999999999999998 99999774322 1222221110
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhhhc
Q 007680 505 LVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVKFL 555 (593)
Q Consensus 505 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~ 555 (593)
....+..+++++.+++.+||+.||++||++.++++.|+.+.....
T Consensus 557 ------~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~~ 601 (613)
T 2ozo_A 557 ------RMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLA 601 (613)
T ss_dssp ------CCCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHHS
T ss_pred ------CCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhc
Confidence 111123456789999999999999999999999999999876653
No 193
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=3.3e-41 Score=364.14 Aligned_cols=251 Identities=25% Similarity=0.362 Sum_probs=207.2
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhh---HHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEE
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALV 346 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 346 (593)
.++|++.+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 104 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV 104 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 568999999999999999999976 79999999997542 23456789999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeee---CCCCcEEEEeeccceec
Q 007680 347 LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILL---DENMVAHVSDFGIYKLL 423 (593)
Q Consensus 347 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll---~~~~~~kL~Dfg~a~~~ 423 (593)
|||+.+|+|.+++..... +++..+..++.|++.||+|||+++ |+||||||+||++ +.++.+||+|||++...
T Consensus 105 ~e~~~~~~L~~~~~~~~~-~~~~~~~~i~~qi~~~l~~lH~~~----ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 179 (484)
T 3nyv_A 105 GEVYTGGELFDEIISRKR-FSEVDAARIIRQVLSGITYMHKNK----IVHRDLKPENLLLESKSKDANIRIIDFGLSTHF 179 (484)
T ss_dssp ECCCCSCBHHHHHHTCSC-CBHHHHHHHHHHHHHHHHHHHHTT----CCCSCCCGGGEEESSSSTTCCEEECCTTHHHHB
T ss_pred EecCCCCCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCC----eeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEc
Confidence 999999999999977654 999999999999999999999655 9999999999999 56789999999999876
Q ss_pred CCCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhhh
Q 007680 424 GEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDA 503 (593)
Q Consensus 424 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 503 (593)
..... .....||+.|+|||++.+ .++.++||||+||++|+|++|+.||..... ......+......
T Consensus 180 ~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~~~i~~~~~~-------- 245 (484)
T 3nyv_A 180 EASKK---MKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANE--YDILKKVEKGKYT-------- 245 (484)
T ss_dssp CCCCS---HHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHCCCC--------
T ss_pred ccccc---cccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCH--HHHHHHHHcCCCC--------
Confidence 54332 234569999999999865 699999999999999999999999976321 1111211111100
Q ss_pred hhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 504 NLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
...+....+++++.+++.+||+.||++|||+.|+++|
T Consensus 246 ------~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 246 ------FELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp ------CCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ------CCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 0011222346688999999999999999999999986
No 194
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=1.5e-40 Score=360.59 Aligned_cols=251 Identities=23% Similarity=0.320 Sum_probs=203.3
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhhH-------------HHHHHHHHHHHHHhhcCCCCcceeeee
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLE-------------RAFRSFDSECEVLRNVRHRNLIKILSS 336 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~h~niv~l~~~ 336 (593)
.++|++.+.||+|+||.||+|+.. +++.||+|+++.... ...+.+.+|+.++++++||||++++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 578999999999999999999976 688999999975421 234678899999999999999999999
Q ss_pred eecCCceEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCC---cEE
Q 007680 337 YSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENM---VAH 413 (593)
Q Consensus 337 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~---~~k 413 (593)
+.+++..++||||+++|+|.+++..... +++..+..++.|++.||+|||+++ |+||||||+||+++.++ .+|
T Consensus 115 ~~~~~~~~lv~e~~~gg~L~~~l~~~~~-~~~~~~~~i~~qi~~~l~~lH~~~----ivH~Dlkp~Nil~~~~~~~~~~k 189 (504)
T 3q5i_A 115 FEDKKYFYLVTEFYEGGELFEQIINRHK-FDECDAANIMKQILSGICYLHKHN----IVHRDIKPENILLENKNSLLNIK 189 (504)
T ss_dssp EECSSEEEEEEECCTTCBHHHHHHHHSC-CCHHHHHHHHHHHHHHHHHHHHTT----EECSCCSGGGEEESSTTCCSSEE
T ss_pred EEcCCEEEEEEecCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCC----eEeCCCcHHHEEEecCCCCccEE
Confidence 9999999999999999999999877654 999999999999999999999654 99999999999998776 699
Q ss_pred EEeeccceecCCCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhc
Q 007680 414 VSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESL 493 (593)
Q Consensus 414 L~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~ 493 (593)
|+|||++....... ......||+.|+|||++. +.++.++||||+||++|+|++|..||...... .....+....
T Consensus 190 l~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~i~~~~ 263 (504)
T 3q5i_A 190 IVDFGLSSFFSKDY---KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQ--DIIKKVEKGK 263 (504)
T ss_dssp ECCCTTCEECCTTS---CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHCC
T ss_pred EEECCCCEEcCCCC---ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHcCC
Confidence 99999998775433 223456999999999876 56999999999999999999999999763221 1111111110
Q ss_pred CCchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 494 PHGLTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
.. ...+....+++++.+++.+||+.||++|||+.|+++|
T Consensus 264 ~~--------------~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 264 YY--------------FDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp CC--------------CCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CC--------------CCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 00 0111122346788999999999999999999999986
No 195
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=1.7e-40 Score=336.25 Aligned_cols=251 Identities=22% Similarity=0.271 Sum_probs=200.2
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhh----HHHHHHHHHHHHHHhhcCCCCcceeeeeee--cCCce
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQL----ERAFRSFDSECEVLRNVRHRNLIKILSSYS--NPDFK 343 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~ 343 (593)
.++|++.+.||+|+||.||+|... +++.||+|+++... ....+.+.+|++++++++||||+++++++. +.+..
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 468999999999999999999975 78999999998653 234567899999999999999999999984 45688
Q ss_pred EEEEeccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeecccee
Q 007680 344 ALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKL 422 (593)
Q Consensus 344 ~lv~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~ 422 (593)
++||||++++ |.+++.... ..+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||.+..
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~----i~H~dlkp~NIl~~~~~~~kl~dfg~~~~ 158 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQG----IVHKDIKPGNLLLTTGGTLKISALGVAEA 158 (305)
T ss_dssp EEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTT----EECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCC----eeecCCCcccEEEcCCCcEEeeccccccc
Confidence 9999999876 777776533 36999999999999999999999655 99999999999999999999999999987
Q ss_pred cCCCCCccccccccCCccccCccccCCCC--CCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhh
Q 007680 423 LGEGEDSVRQTMTMATIGYMAPEYGLEGI--VSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEV 500 (593)
Q Consensus 423 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (593)
..............|++.|+|||++.+.. ++.++||||||+++|||++|+.||...... .....+....
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~i~~~~------- 229 (305)
T 2wtk_C 159 LHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIY--KLFENIGKGS------- 229 (305)
T ss_dssp CCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHCC-------
T ss_pred cCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHH--HHHHHHhcCC-------
Confidence 75433333334456899999999987644 478999999999999999999999763211 1111111100
Q ss_pred hhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 501 VDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
...+..++..+.+++.+||+.||++|||+.|+++|
T Consensus 230 -----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 230 -----------YAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp -----------CCCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred -----------CCCCCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 01112345678999999999999999999999987
No 196
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=4e-41 Score=344.76 Aligned_cols=262 Identities=19% Similarity=0.235 Sum_probs=207.7
Q ss_pred CCHHHHHHhhhccccc-cccCccCcccEEEEEeC-CCCeEEEEEeehhh--HHHHHHHHHHHHHHhhc-CCCCcceeeee
Q 007680 262 TSYLDIQRATDEFNEC-NLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQL--ERAFRSFDSECEVLRNV-RHRNLIKILSS 336 (593)
Q Consensus 262 ~~~~~~~~~~~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~ 336 (593)
..+.......++|.+. +.||+|+||.||+|... +++.||+|+++... ......+.+|+.++.++ .||||++++++
T Consensus 18 ~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~ 97 (327)
T 3lm5_A 18 LYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEV 97 (327)
T ss_dssp CCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEE
T ss_pred hHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEE
Confidence 3445566778888888 89999999999999976 69999999997643 22356788999999999 56999999999
Q ss_pred eecCCceEEEEeccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCC---CCcE
Q 007680 337 YSNPDFKALVLEFMPNGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDE---NMVA 412 (593)
Q Consensus 337 ~~~~~~~~lv~e~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~---~~~~ 412 (593)
+.+.+..++||||+++|+|.+++... ...+++.++..++.|++.||+|||+++ |+||||||+||+++. ++.+
T Consensus 98 ~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~g----ivH~Dikp~NIl~~~~~~~~~~ 173 (327)
T 3lm5_A 98 YENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNN----IVHLDLKPQNILLSSIYPLGDI 173 (327)
T ss_dssp EECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTT----EECSCCCGGGEEESCBTTBCCE
T ss_pred EEeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC----eecCcCChHHEEEecCCCCCcE
Confidence 99999999999999999999998654 236899999999999999999999654 999999999999998 7899
Q ss_pred EEEeeccceecCCCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHh
Q 007680 413 HVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKES 492 (593)
Q Consensus 413 kL~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~ 492 (593)
||+|||+++....... .....||+.|+|||++.+..++.++||||||+++|||++|+.||......+ ....+...
T Consensus 174 kL~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--~~~~i~~~ 248 (327)
T 3lm5_A 174 KIVDFGMSRKIGHACE---LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQE--TYLNISQV 248 (327)
T ss_dssp EECCGGGCEEC------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHT
T ss_pred EEeeCccccccCCccc---cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchH--HHHHHHhc
Confidence 9999999987654322 233568999999999999999999999999999999999999997632211 11111111
Q ss_pred cCCchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 493 LPHGLTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
... ........++..+.+++.+||+.||++|||++|+++|
T Consensus 249 ~~~--------------~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 249 NVD--------------YSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp CCC--------------CCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred ccc--------------cCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 000 0001112345678999999999999999999999876
No 197
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=2.4e-40 Score=344.11 Aligned_cols=267 Identities=21% Similarity=0.249 Sum_probs=204.3
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhh-HHHHHHHHHHHHHHhhcCCCCcceeeeeeecC-----Cce
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSYSNP-----DFK 343 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~ 343 (593)
.++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++.+++||||+++++++... ...
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 468999999999999999999965 78899999997533 34457789999999999999999999998665 368
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceec
Q 007680 344 ALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLL 423 (593)
Q Consensus 344 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~ 423 (593)
++||||++ ++|.+++.... +++.++..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++...
T Consensus 106 ~iv~e~~~-~~L~~~l~~~~--~~~~~~~~i~~qi~~aL~~LH~~~----ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~ 178 (364)
T 3qyz_A 106 YIVQDLME-TDLYKLLKTQH--LSNDHICYFLYQILRGLKYIHSAN----VLHRDLKPSNLLLNTTCDLKICDFGLARVA 178 (364)
T ss_dssp EEEEECCS-EEHHHHHHHCC--CCHHHHHHHHHHHHHHHHHHHHTT----EECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEcccC-cCHHHHHHhCC--CCHHHHHHHHHHHHHHHHHHHHCC----eecCCCChHhEEECCCCCEEEEeCcceEec
Confidence 99999996 59999997754 899999999999999999999654 999999999999999999999999999876
Q ss_pred CCCCCcc-ccccccCCccccCccccCC-CCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhh
Q 007680 424 GEGEDSV-RQTMTMATIGYMAPEYGLE-GIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVV 501 (593)
Q Consensus 424 ~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 501 (593)
....... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+ ....+.........+..
T Consensus 179 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~--~~~~i~~~~~~~~~~~~ 256 (364)
T 3qyz_A 179 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD--QLNHILGILGSPSQEDL 256 (364)
T ss_dssp CGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGG--HHHHHHHHHCSCCHHHH
T ss_pred CCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHH--HHHHHHHHhCCCCHHHH
Confidence 5433221 1234579999999998654 458999999999999999999999997643222 11111111111111100
Q ss_pred hhhh----hh--------h-hhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 502 DANL----VR--------E-EQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 502 ~~~~----~~--------~-~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
.... .. . .........++.++.+++.+||+.||++|||+.|+++|
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 257 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp HTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000 00 0 00000112345678999999999999999999999986
No 198
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=1.8e-40 Score=344.68 Aligned_cols=276 Identities=20% Similarity=0.237 Sum_probs=204.7
Q ss_pred CCHHHHHHhhhccccccccCccCcccEEEEEeCCCCeEEEEEeehhh-----------HHHHHHHHHHHHHHhhcCCCCc
Q 007680 262 TSYLDIQRATDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQL-----------ERAFRSFDSECEVLRNVRHRNL 330 (593)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-----------~~~~~~~~~E~~~l~~l~h~ni 330 (593)
....++....++|++.+.||+|+||.||+|...+|+.||||++.... ....+.+.+|++++++++||||
T Consensus 12 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 91 (362)
T 3pg1_A 12 DLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNI 91 (362)
T ss_dssp HHHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTB
T ss_pred HHHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCc
Confidence 34567888899999999999999999999998889999999985431 2234778999999999999999
Q ss_pred ceeeeeeec-----CCceEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCee
Q 007680 331 IKILSSYSN-----PDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNIL 405 (593)
Q Consensus 331 v~l~~~~~~-----~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIl 405 (593)
+++++++.. ....++||||++ |+|.+++......+++..+..++.|++.||+|||+++ |+||||||+||+
T Consensus 92 v~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~----ivH~Dlkp~NIl 166 (362)
T 3pg1_A 92 LGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAG----VVHRDLHPGNIL 166 (362)
T ss_dssp CCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTT----CCCCCCCGGGEE
T ss_pred cceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCc----CEecCCChHHEE
Confidence 999999843 336799999997 6999998877667999999999999999999999655 999999999999
Q ss_pred eCCCCcEEEEeeccceecCCCCCccccccccCCccccCccccCC-CCCCccchHHHHHHHHHHHHhCCCCCCccccccch
Q 007680 406 LDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLE-GIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMS 484 (593)
Q Consensus 406 l~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~ 484 (593)
++.++.+||+|||++....... ......+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||......+ .
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~ 242 (362)
T 3pg1_A 167 LADNNDITICDFNLAREDTADA---NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYN-Q 242 (362)
T ss_dssp ECTTCCEEECCTTC------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-H
T ss_pred EcCCCCEEEEecCccccccccc---ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHH-H
Confidence 9999999999999997544332 2234568999999998876 679999999999999999999999997642211 1
Q ss_pred HHHHHHHhcCCchhhh-----------hhhhhhhh--hhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 485 LRRWVKESLPHGLTEV-----------VDANLVRE--EQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 485 ~~~~~~~~~~~~~~~~-----------~~~~~~~~--~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
..............+. +....... ..........++.+.+++.+||+.||++|||+.|+++|
T Consensus 243 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 243 LNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp HHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 1111111111111110 00000000 00011112335678999999999999999999999986
No 199
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=3.4e-40 Score=343.82 Aligned_cols=263 Identities=20% Similarity=0.196 Sum_probs=194.5
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehh--hHHHHHHHHHHHHHHhhcCCCCcceeeeeeecCC------
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQ--LERAFRSFDSECEVLRNVRHRNLIKILSSYSNPD------ 341 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 341 (593)
.++|++.+.||+|+||.||+|... +++.||||++... .....+.+.+|+.+++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 468999999999999999999865 6899999999753 2344567889999999999999999999987665
Q ss_pred ceEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccce
Q 007680 342 FKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYK 421 (593)
Q Consensus 342 ~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~ 421 (593)
..++||||++ ++|.+++.. .+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++
T Consensus 104 ~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~al~~lH~~~----ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 175 (371)
T 2xrw_A 104 DVYIVMELMD-ANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAG----IIHRDLKPSNIVVKSDCTLKILDFGLAR 175 (371)
T ss_dssp EEEEEEECCS-EEHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTT----CCCSCCCGGGEEECTTSCEEECCCCC--
T ss_pred ceEEEEEcCC-CCHHHHHhh---ccCHHHHHHHHHHHHHHHHHHHHCC----eecccCCHHHEEEcCCCCEEEEEeeccc
Confidence 7899999996 588888853 3899999999999999999999654 9999999999999999999999999998
Q ss_pred ecCCCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhh
Q 007680 422 LLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVV 501 (593)
Q Consensus 422 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 501 (593)
...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+.........+..
T Consensus 176 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--~~~~~i~~~~~~~~~~~~ 250 (371)
T 2xrw_A 176 TAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI--DQWNKVIEQLGTPCPEFM 250 (371)
T ss_dssp -----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHC-CCCCCHHHH
T ss_pred cccccc---ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHhCCCCHHHH
Confidence 654322 223456899999999999999999999999999999999999999764221 111111111110000000
Q ss_pred h---hhhh------------------h---hhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 502 D---ANLV------------------R---EEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 502 ~---~~~~------------------~---~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
. .... . ...........+.++.+|+.+||..||++|||++|+++|
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 251 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp TTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred HHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 0 0000 0 000011122346789999999999999999999999987
No 200
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=5.6e-42 Score=358.17 Aligned_cols=247 Identities=15% Similarity=0.207 Sum_probs=193.2
Q ss_pred hhccccccccCccCcccEEEEEe-CCCCeEEEEEeehh---hHHHHHHHHHHH---HHHhhcCCCCcceee-------ee
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTI-SDGTDVAIKVFNLQ---LERAFRSFDSEC---EVLRNVRHRNLIKIL-------SS 336 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~---~~l~~l~h~niv~l~-------~~ 336 (593)
.++|++.+.||+|+||.||+|++ .+|+.||||++... .....+.+.+|+ +++++++||||++++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 46899999999999999999996 47999999999743 234557889999 455555899999998 55
Q ss_pred eecCC-----------------ceEEEEeccCCCCHHHHHhhCCC------CCCHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 007680 337 YSNPD-----------------FKALVLEFMPNGSLEKWLYSHNY------FLDILERLNIMIDVGSALEYLHNGHSSVH 393 (593)
Q Consensus 337 ~~~~~-----------------~~~lv~e~~~~gsL~~~l~~~~~------~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ 393 (593)
+.+++ ..++||||+ +|+|.+++...+. .+++..+..++.|++.||+|||+++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---- 226 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---- 226 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT----
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCC----
Confidence 55543 278999999 6899999986433 2335888899999999999999654
Q ss_pred eEecCCCCCCeeeCCCCcEEEEeeccceecCCCCCccccccccCCccccCccccCCC-----------CCCccchHHHHH
Q 007680 394 IIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEG-----------IVSAKCDVYSYG 462 (593)
Q Consensus 394 ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~s~~~DvwSlG 462 (593)
|+||||||+|||++.++.+||+|||+++.... ......| +.|+|||++.+. .++.++||||||
T Consensus 227 ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG 300 (377)
T 3byv_A 227 LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA-----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALG 300 (377)
T ss_dssp EECSCCCGGGEEECTTCCEEECCGGGCEETTC-----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHH
T ss_pred eecCCCCHHHEEEcCCCCEEEEechhheecCC-----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHH
Confidence 99999999999999999999999999986432 2234457 999999998877 899999999999
Q ss_pred HHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHH
Q 007680 463 VLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTD 542 (593)
Q Consensus 463 vvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e 542 (593)
|++|||++|+.||....... ....... ....+++++.+++.+||+.||++|||+.|
T Consensus 301 ~il~elltg~~Pf~~~~~~~-------------~~~~~~~-----------~~~~~~~~~~~li~~~L~~dp~~Rpt~~e 356 (377)
T 3byv_A 301 LVIYWIWCADLPITKDAALG-------------GSEWIFR-----------SCKNIPQPVRALLEGFLRYPKEDRLLPLQ 356 (377)
T ss_dssp HHHHHHHHSSCCC------C-------------CSGGGGS-----------SCCCCCHHHHHHHHHHTCSSGGGCCCHHH
T ss_pred HHHHHHHHCCCCCccccccc-------------chhhhhh-----------hccCCCHHHHHHHHHHcCCCchhCCCHHH
Confidence 99999999999996632111 0001100 01133567899999999999999999999
Q ss_pred HHHH--HHHhhh
Q 007680 543 AAAK--LKKIKV 552 (593)
Q Consensus 543 vl~~--L~~i~~ 552 (593)
+++| ++++..
T Consensus 357 ~l~hp~f~~~~~ 368 (377)
T 3byv_A 357 AMETPEYEQLRT 368 (377)
T ss_dssp HHTSHHHHHHHH
T ss_pred HhhChHHHHHHH
Confidence 9975 455443
No 201
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.4e-40 Score=337.28 Aligned_cols=267 Identities=20% Similarity=0.269 Sum_probs=197.8
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhhHHHHHHHHHHHHHHhhcCCCCcceeeeeee-----------
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYS----------- 338 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~----------- 338 (593)
.++|++.+.||+|+||.||+|... +++.||+|++........+.+.+|++++++++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 468999999999999999999976 58999999998766666778999999999999999999999874
Q ss_pred ---cCCceEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeC-CCCcEEE
Q 007680 339 ---NPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLD-ENMVAHV 414 (593)
Q Consensus 339 ---~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~-~~~~~kL 414 (593)
+.+..++||||++ |+|.+++... .+++..+..++.|++.||+|||+++ |+||||||+||+++ +++.+||
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~----i~H~dlkp~Nil~~~~~~~~kl 162 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQG--PLLEEHARLFMYQLLRGLKYIHSAN----VLHRDLKPANLFINTEDLVLKI 162 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHHHTT----CBCCCCSGGGEEEETTTTEEEE
T ss_pred cccccCceeEEeeccC-CCHHHHhhcC--CccHHHHHHHHHHHHHHHHHHHhCC----EecCCCCHHHEEEcCCCCeEEE
Confidence 3467899999997 6999999754 3899999999999999999999655 99999999999997 5679999
Q ss_pred EeeccceecCCCCCc-cccccccCCccccCccccCC-CCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHh
Q 007680 415 SDFGIYKLLGEGEDS-VRQTMTMATIGYMAPEYGLE-GIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKES 492 (593)
Q Consensus 415 ~Dfg~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~ 492 (593)
+|||+++........ .......++..|+|||.+.+ ..++.++||||||+++|||++|+.||...... .....+...
T Consensus 163 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~--~~~~~~~~~ 240 (320)
T 2i6l_A 163 GDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHEL--EQMQLILES 240 (320)
T ss_dssp CCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHH
T ss_pred ccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHh
Confidence 999999876432211 11233457899999998765 67899999999999999999999999764321 112222222
Q ss_pred cCCchhhh-----------hhhhhhhh-hhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 493 LPHGLTEV-----------VDANLVRE-EQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 493 ~~~~~~~~-----------~~~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
.+....+. +....... .........++.++.+++.+||+.||++|||++|+++|
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 241 IPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp SCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred cCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 22110000 00000000 00001112356789999999999999999999999975
No 202
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=4.9e-41 Score=346.91 Aligned_cols=265 Identities=21% Similarity=0.283 Sum_probs=206.8
Q ss_pred hhccccccccCccCcccEEEEEeCCCCeEEEEEeehhhHHH-----------------HHHHHHHHHHHhhcCCCCccee
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERA-----------------FRSFDSECEVLRNVRHRNLIKI 333 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-----------------~~~~~~E~~~l~~l~h~niv~l 333 (593)
.++|++.+.||+|+||.||+|+. +|+.||+|++....... .+.+.+|+.++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 46899999999999999999999 89999999998654321 1789999999999999999999
Q ss_pred eeeeecCCceEEEEeccCCCCHHHH------HhhC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeee
Q 007680 334 LSSYSNPDFKALVLEFMPNGSLEKW------LYSH-NYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILL 406 (593)
Q Consensus 334 ~~~~~~~~~~~lv~e~~~~gsL~~~------l~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll 406 (593)
++++.+.+..++||||+++++|.++ +... ...+++..+..++.|++.||+|||+ ..+|+||||||+||++
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~~i~H~dl~p~Nil~ 185 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHN---EKNICHRDVKPSNILM 185 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHH---TSCEECCCCCGGGEEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhc---cCCEeecCCChHhEEE
Confidence 9999999999999999999999998 5542 3469999999999999999999996 1359999999999999
Q ss_pred CCCCcEEEEeeccceecCCCCCccccccccCCccccCccccCCC-CCCc-cchHHHHHHHHHHHHhCCCCCCccccccch
Q 007680 407 DENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEG-IVSA-KCDVYSYGVLLMETFTRKRPTDEMFIGEMS 484 (593)
Q Consensus 407 ~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~-~~DvwSlGvvl~elltg~~pf~~~~~~~~~ 484 (593)
+.++.+||+|||.+...... ......++..|+|||++.+. .++. ++||||||+++|||++|+.||....... .
T Consensus 186 ~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~ 260 (348)
T 2pml_X 186 DKNGRVKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLV-E 260 (348)
T ss_dssp CTTSCEEECCCTTCEECBTT----EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSH-H
T ss_pred cCCCcEEEeccccccccccc----cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHH-H
Confidence 99999999999999876443 23345689999999998877 6666 9999999999999999999997643321 1
Q ss_pred HHHHHHHhcCC---chhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 485 LRRWVKESLPH---GLTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 485 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
....+...... .......... . .........++.++.+++.+||+.||++|||+.|+++|
T Consensus 261 ~~~~i~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h 323 (348)
T 2pml_X 261 LFNNIRTKNIEYPLDRNHFLYPLT-N-KKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH 323 (348)
T ss_dssp HHHHHTSCCCCCCCSSSSSTTTTC-C---------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HHHHHhccCcCCccchhhhhcccc-c-cccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 22222111100 0000000000 0 00001112346688999999999999999999999985
No 203
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=1.5e-40 Score=335.63 Aligned_cols=267 Identities=22% Similarity=0.313 Sum_probs=203.2
Q ss_pred hccccccccCccCcccEEEEEeC-CCCeEEEEEeehhh--HHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEEEe
Q 007680 272 DEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVLE 348 (593)
Q Consensus 272 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 348 (593)
++|++.+.||+|+||.||+|+.. +|+.||+|+++... ....+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 67999999999999999999976 78999999987643 2234678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCCCC
Q 007680 349 FMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGE 427 (593)
Q Consensus 349 ~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~ 427 (593)
|++ ++|.+++.... ..+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||.+.......
T Consensus 83 ~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~----i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~ 157 (299)
T 2r3i_A 83 FLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 157 (299)
T ss_dssp CCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT----CCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCS
T ss_pred ccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHCC----ccCCCCCHHHeEEcCCCCEEECcchhhhhccCCc
Confidence 997 69999998764 35899999999999999999999654 9999999999999999999999999988765432
Q ss_pred CccccccccCCccccCccccCCCC-CCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHh-cCCc--hhhhhh-
Q 007680 428 DSVRQTMTMATIGYMAPEYGLEGI-VSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKES-LPHG--LTEVVD- 502 (593)
Q Consensus 428 ~~~~~~~~~gt~~y~aPE~~~~~~-~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~-~~~~--~~~~~~- 502 (593)
. ......+|+.|+|||++.+.. ++.++||||||+++|+|++|+.||......+ ......... .+.. ......
T Consensus 158 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 234 (299)
T 2r3i_A 158 R--TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID-QLFRIFRTLGTPDEVVWPGVTSM 234 (299)
T ss_dssp B--CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCTTTSTTGGGS
T ss_pred c--ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHH-HHHHHHHHhCCCchhhhhHhhcC
Confidence 2 223346899999999987765 7999999999999999999999997743221 112222111 1110 000000
Q ss_pred ----hhhhh--hhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 503 ----ANLVR--EEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 503 ----~~~~~--~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
..... ..........++.++.+++.+||+.||++|||+.|+++|
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~h 284 (299)
T 2r3i_A 235 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 284 (299)
T ss_dssp TTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 00000 000000112345688999999999999999999999874
No 204
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=2.3e-40 Score=332.02 Aligned_cols=245 Identities=18% Similarity=0.265 Sum_probs=199.8
Q ss_pred hhhccccccccCccCcccEEEEEeC-CCCeEEEEEeehh--hHHHHHHHHHHHHHHhhc-CCCCcceeeeeeecCCceEE
Q 007680 270 ATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQ--LERAFRSFDSECEVLRNV-RHRNLIKILSSYSNPDFKAL 345 (593)
Q Consensus 270 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 345 (593)
..++|++.+.||+|+||.||+|... +++.||+|+++.. .......+.+|+..+.++ +||||+++++++.+.+..++
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l 88 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI 88 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence 4678999999999999999999976 7999999999753 233456788999999999 99999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCC---CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCC-------------
Q 007680 346 VLEFMPNGSLEKWLYSHN---YFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDEN------------- 409 (593)
Q Consensus 346 v~e~~~~gsL~~~l~~~~---~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~------------- 409 (593)
||||+++++|.+++.... ..+++.++..++.|++.||+|||+++ |+||||||+||+++.+
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~----ivH~Dikp~NIl~~~~~~~~~~~~~~~~~ 164 (289)
T 1x8b_A 89 QNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS----LVHMDIKPSNIFISRTSIPNAASEEGDED 164 (289)
T ss_dssp EEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT----EECSCCSGGGEEEC---------------
T ss_pred EEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCC----EeecCCCHHHEEEcCCCCCcccccccccc
Confidence 999999999999997642 34899999999999999999999655 9999999999999844
Q ss_pred ------CcEEEEeeccceecCCCCCccccccccCCccccCccccCCC-CCCccchHHHHHHHHHHHHhCCCCCCcccccc
Q 007680 410 ------MVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEG-IVSAKCDVYSYGVLLMETFTRKRPTDEMFIGE 482 (593)
Q Consensus 410 ------~~~kL~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~ 482 (593)
..+||+|||.+....... ...||+.|+|||++.+. .+++++|||||||++|+|++|.+|+....
T Consensus 165 ~~~~~~~~~kl~Dfg~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~--- 235 (289)
T 1x8b_A 165 DWASNKVMFKIGDLGHVTRISSPQ------VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD--- 235 (289)
T ss_dssp -----CCCEEECCCTTCEETTCSC------CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH---
T ss_pred cccCCceEEEEcccccccccCCcc------ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh---
Confidence 479999999998765432 23589999999998766 56789999999999999999998764421
Q ss_pred chHHHHHHHhcCCchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 483 MSLRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 483 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
.... +...... ..+..+++++.+++.+||+.||++|||+.|+++|
T Consensus 236 -~~~~-~~~~~~~-----------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 236 -QWHE-IRQGRLP-----------------RIPQVLSQEFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp -HHHH-HHTTCCC-----------------CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred -HHHH-HHcCCCC-----------------CCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 1111 1111000 0111235678999999999999999999999875
No 205
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=4.8e-41 Score=335.83 Aligned_cols=258 Identities=21% Similarity=0.266 Sum_probs=204.4
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhh--HHHHHHHHHHHHHHhhcCCCCcceeeeeee--cCCceEE
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSYS--NPDFKAL 345 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~~l 345 (593)
.++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++. ..+..++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 578999999999999999999976 78999999997542 345677899999999999999999999874 4568899
Q ss_pred EEeccCCCCHHHHHhhCC---CCCCHHHHHHHHHHHHHHHHHHHhcCC-CCCeEecCCCCCCeeeCCCCcEEEEeeccce
Q 007680 346 VLEFMPNGSLEKWLYSHN---YFLDILERLNIMIDVGSALEYLHNGHS-SVHIIHCDLKPTNILLDENMVAHVSDFGIYK 421 (593)
Q Consensus 346 v~e~~~~gsL~~~l~~~~---~~l~~~~~~~i~~~i~~~L~~LH~~~~-~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~ 421 (593)
||||+++++|.+++.... ..+++..+..++.|++.||+|||+++. ..+|+||||||+||+++.++.+||+|||.+.
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~ 164 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 164 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHH
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchhe
Confidence 999999999999997532 348999999999999999999996431 1239999999999999999999999999988
Q ss_pred ecCCCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhh
Q 007680 422 LLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVV 501 (593)
Q Consensus 422 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 501 (593)
....... ......+++.|+|||++.+..++.++||||||+++|+|++|+.||..... ......+......
T Consensus 165 ~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~~i~~~~~~------ 234 (279)
T 2w5a_A 165 ILNHDTS--FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ--KELAGKIREGKFR------ 234 (279)
T ss_dssp HC---CH--HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHTCCC------
T ss_pred eeccccc--cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCH--HHHHHHHhhcccc------
Confidence 7643321 12234689999999999988999999999999999999999999976421 1111111111110
Q ss_pred hhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHH
Q 007680 502 DANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKK 549 (593)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 549 (593)
..+..++.++.+++.+||+.||++|||+.|+++++..
T Consensus 235 -----------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~ 271 (279)
T 2w5a_A 235 -----------RIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI 271 (279)
T ss_dssp -----------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred -----------cCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhh
Confidence 0111245678999999999999999999999987644
No 206
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=1.2e-41 Score=371.20 Aligned_cols=261 Identities=27% Similarity=0.429 Sum_probs=212.4
Q ss_pred HHHhhhccccccccCccCcccEEEEEeCCCCeEEEEEeehhhHHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEE
Q 007680 267 IQRATDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALV 346 (593)
Q Consensus 267 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 346 (593)
+....++|++.+.||+|+||.||+|.+.++..||||+++.... ..+.+.+|++++++++||||+++++++.+ +..++|
T Consensus 262 ~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv 339 (535)
T 2h8h_A 262 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 339 (535)
T ss_dssp SBCCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEE
T ss_pred eecchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEe
Confidence 3345678999999999999999999998788899999986532 34678999999999999999999999876 678999
Q ss_pred EeccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCC
Q 007680 347 LEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGE 425 (593)
Q Consensus 347 ~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~ 425 (593)
|||+++|+|.+++.... ..+++.++..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 340 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~----ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 415 (535)
T 2h8h_A 340 TEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN----YVHRDLRAANILVGENLVCKVADFGLARLIED 415 (535)
T ss_dssp ECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT----CCCSCCSGGGEEECGGGCEEECCTTSTTTCCC
T ss_pred eehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC----eeCCCCCHhhEEEcCCCcEEEcccccceecCC
Confidence 99999999999997532 35899999999999999999999654 99999999999999999999999999986543
Q ss_pred CCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccchHHHHHHHhcCCchhhhhhhh
Q 007680 426 GEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDAN 504 (593)
Q Consensus 426 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 504 (593)
... .......++..|+|||++.+..++.++|||||||++|||++ |+.||...... .....+....
T Consensus 416 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~--~~~~~i~~~~----------- 481 (535)
T 2h8h_A 416 NEY-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--EVLDQVERGY----------- 481 (535)
T ss_dssp HHH-HTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHH--HHHHHHHTTC-----------
T ss_pred Cce-ecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCC-----------
Confidence 211 11223346788999999988899999999999999999999 99999764221 1111111110
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhh
Q 007680 505 LVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVK 553 (593)
Q Consensus 505 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 553 (593)
..+.+..++..+.++|.+||+.||++|||+.++++.|+.+...
T Consensus 482 ------~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~ 524 (535)
T 2h8h_A 482 ------RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 524 (535)
T ss_dssp ------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCC
T ss_pred ------CCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhc
Confidence 0111224567889999999999999999999999999987544
No 207
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=2.2e-40 Score=334.33 Aligned_cols=253 Identities=25% Similarity=0.308 Sum_probs=205.9
Q ss_pred hhhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhh---------HHHHHHHHHHHHHHhhcC-CCCcceeeeeee
Q 007680 270 ATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQL---------ERAFRSFDSECEVLRNVR-HRNLIKILSSYS 338 (593)
Q Consensus 270 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---------~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~ 338 (593)
..++|++.+.||+|+||.||+|... +|+.||+|+++... ....+.+.+|+++++++. ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 4678999999999999999999975 68999999997532 234567889999999995 999999999999
Q ss_pred cCCceEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeec
Q 007680 339 NPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFG 418 (593)
Q Consensus 339 ~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg 418 (593)
..+..++||||+++++|.+++.... .+++..+..++.|++.||+|||+++ ++||||||+||+++.++.+||+|||
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~----i~H~dl~p~Nil~~~~~~~kl~dfg 169 (298)
T 1phk_A 95 TNTFFFLVFDLMKKGELFDYLTEKV-TLSEKETRKIMRALLEVICALHKLN----IVHRDLKPENILLDDDMNIKLTDFG 169 (298)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTT----EECSCCSGGGEEECTTCCEEECCCT
T ss_pred cCCeEEEEEeccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHCC----cccCCCCcceEEEcCCCcEEEeccc
Confidence 9999999999999999999998754 3899999999999999999999654 9999999999999999999999999
Q ss_pred cceecCCCCCccccccccCCccccCccccC------CCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHh
Q 007680 419 IYKLLGEGEDSVRQTMTMATIGYMAPEYGL------EGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKES 492 (593)
Q Consensus 419 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~ 492 (593)
.+........ .....+++.|+|||++. ...++.++||||||+++|+|++|+.||..... ......+...
T Consensus 170 ~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--~~~~~~~~~~ 244 (298)
T 1phk_A 170 FSCQLDPGEK---LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ--MLMLRMIMSG 244 (298)
T ss_dssp TCEECCTTCC---BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHT
T ss_pred chhhcCCCcc---cccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccH--HHHHHHHhcC
Confidence 9987654332 23356899999999874 45689999999999999999999999976321 1111111111
Q ss_pred cCCchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 493 LPHGLTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
.... ..+....++..+.+++.+||+.||++|||+.|+++|
T Consensus 245 ~~~~--------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (298)
T 1phk_A 245 NYQF--------------GSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH 284 (298)
T ss_dssp CCCC--------------CTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred Cccc--------------CcccccccCHHHHHHHHHHccCCcccCCCHHHHHhC
Confidence 0000 001112345678999999999999999999999874
No 208
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=2.2e-40 Score=369.83 Aligned_cols=251 Identities=21% Similarity=0.229 Sum_probs=206.6
Q ss_pred HhhhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhh---HHHHHHHHHHHHHHhhc-CCCCcceeeeeeecCCce
Q 007680 269 RATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQL---ERAFRSFDSECEVLRNV-RHRNLIKILSSYSNPDFK 343 (593)
Q Consensus 269 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 343 (593)
...++|++.+.||+|+||.||+|+.+ +++.||||+++... ....+.+..|..++..+ +||+|+++++++.+.+..
T Consensus 338 ~~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~ 417 (674)
T 3pfq_A 338 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRL 417 (674)
T ss_dssp --CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEE
T ss_pred ccccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEE
Confidence 34678999999999999999999976 68899999998652 33456778899999988 799999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceec
Q 007680 344 ALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLL 423 (593)
Q Consensus 344 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~ 423 (593)
|+||||+++|+|.+++...+. +++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++..
T Consensus 418 ~lV~E~~~gg~L~~~l~~~~~-~~~~~~~~~~~qi~~aL~~LH~~g----IiHrDLKp~NILl~~~g~ikL~DFGla~~~ 492 (674)
T 3pfq_A 418 YFVMEYVNGGDLMYHIQQVGR-FKEPHAVFYAAEIAIGLFFLQSKG----IIYRDLKLDNVMLDSEGHIKIADFGMCKEN 492 (674)
T ss_dssp EEEEECCCSCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHTS----EECCCCCSTTEEECSSSCEEECCCTTCEEC
T ss_pred EEEEeCcCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhCC----eEeccCChhhEEEcCCCcEEEeecceeecc
Confidence 999999999999999987654 999999999999999999999654 999999999999999999999999999864
Q ss_pred CCCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhhh
Q 007680 424 GEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDA 503 (593)
Q Consensus 424 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 503 (593)
..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+...
T Consensus 493 ~~~~~--~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~--~~~~~i~~~----------- 557 (674)
T 3pfq_A 493 IWDGV--TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED--ELFQSIMEH----------- 557 (674)
T ss_dssp CCTTC--CBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHSS-----------
T ss_pred ccCCc--ccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHH--HHHHHHHhC-----------
Confidence 33322 234467999999999999999999999999999999999999999763211 111111110
Q ss_pred hhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCH-----HHHHHH
Q 007680 504 NLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINM-----TDAAAK 546 (593)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~-----~evl~~ 546 (593)
.. ..+..+++++.+|+.+||+.||++||++ +|+++|
T Consensus 558 ~~-------~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h 598 (674)
T 3pfq_A 558 NV-------AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 598 (674)
T ss_dssp CC-------CCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSS
T ss_pred CC-------CCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcC
Confidence 00 0112345688999999999999999997 677654
No 209
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=1.4e-40 Score=345.93 Aligned_cols=262 Identities=21% Similarity=0.281 Sum_probs=185.4
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehh--hHHHHHHHHHHHHHHhhcCCCCcceeeeeeecC------C
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQ--LERAFRSFDSECEVLRNVRHRNLIKILSSYSNP------D 341 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~ 341 (593)
.++|++.+.||+|+||.||+|... +|+.||||++... .....+.+.+|+++++.++||||+++++++... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 468999999999999999999864 7899999998653 234456788999999999999999999998654 5
Q ss_pred ceEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccce
Q 007680 342 FKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYK 421 (593)
Q Consensus 342 ~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~ 421 (593)
..++|+|++ +++|.+++... .+++..+..++.|+++||+|||+++ |+||||||+||+++.++.+||+|||+++
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~g----ivH~Dlkp~NIll~~~~~~kL~DFG~a~ 180 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIHSAD----IIHRDLKPSNLAVNEDCELKILDFGLAR 180 (367)
T ss_dssp CCEEEEECC-CEECC-----C--CCCHHHHHHHHHHHHHHHHHHHHTT----CCCCCCCGGGEEECTTCCEEECC-----
T ss_pred eEEEEeccc-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC----eeeCCCCHhhEEECCCCCEEEeeccccc
Confidence 679999999 78999998763 3999999999999999999999654 9999999999999999999999999998
Q ss_pred ecCCCCCccccccccCCccccCccccCC-CCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhh
Q 007680 422 LLGEGEDSVRQTMTMATIGYMAPEYGLE-GIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEV 500 (593)
Q Consensus 422 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (593)
..... .....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||.+... ......+.........+.
T Consensus 181 ~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--~~~l~~i~~~~g~p~~~~ 253 (367)
T 2fst_X 181 HTADE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH--IDQLKLILRLVGTPGAEL 253 (367)
T ss_dssp ---------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHHHCSCCHHH
T ss_pred ccccc-----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHhCCCCHHH
Confidence 65432 233568999999999876 6799999999999999999999999976422 111111111111100000
Q ss_pred hhh-----------hhhh-hhhh-hhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 501 VDA-----------NLVR-EEQA-FSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 501 ~~~-----------~~~~-~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
... .+.. .... .......++.+.+|+.+||..||++|||+.|+++|
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 254 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp HTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 000 0000 0000 00111335678999999999999999999999987
No 210
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=5.5e-41 Score=339.35 Aligned_cols=264 Identities=23% Similarity=0.297 Sum_probs=188.3
Q ss_pred HhhhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhh-HHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEE
Q 007680 269 RATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALV 346 (593)
Q Consensus 269 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 346 (593)
...++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.++++++||||+++++++...+..++|
T Consensus 12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (303)
T 2vwi_A 12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLV 91 (303)
T ss_dssp -CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEE
T ss_pred cchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEE
Confidence 34678999999999999999999864 78999999987543 33456788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhh-------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeecc
Q 007680 347 LEFMPNGSLEKWLYS-------HNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGI 419 (593)
Q Consensus 347 ~e~~~~gsL~~~l~~-------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 419 (593)
|||+++++|.+++.. ....+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||.
T Consensus 92 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~----i~H~dl~p~Nil~~~~~~~kl~dfg~ 167 (303)
T 2vwi_A 92 MKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG----QIHRDVKAGNILLGEDGSVQIADFGV 167 (303)
T ss_dssp EECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTT----CCCCCCSGGGEEECTTCCEEECCCHH
T ss_pred ehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCC----CCCCCCChhhEEEcCCCCEEEEeccc
Confidence 999999999999874 2335899999999999999999999654 99999999999999999999999999
Q ss_pred ceecCCCCCc---cccccccCCccccCccccCC-CCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCC
Q 007680 420 YKLLGEGEDS---VRQTMTMATIGYMAPEYGLE-GIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPH 495 (593)
Q Consensus 420 a~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 495 (593)
+......... .......||+.|+|||++.+ ..++.++||||||+++|||++|+.||........ ........+.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~~~~~~~~~~ 245 (303)
T 2vwi_A 168 SAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKV--LMLTLQNDPP 245 (303)
T ss_dssp HHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGH--HHHHHTSSCC
T ss_pred hheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhH--HHHHhccCCC
Confidence 8766543211 11233468999999998865 5689999999999999999999999977432221 1111111111
Q ss_pred chhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 496 GLTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
...... ........++.++.+++.+||+.||++|||+.|+++|
T Consensus 246 ~~~~~~--------~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 246 SLETGV--------QDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp CTTC-------------CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred cccccc--------ccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 110000 0000111235678999999999999999999999975
No 211
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=3.2e-40 Score=350.39 Aligned_cols=197 Identities=24% Similarity=0.325 Sum_probs=172.4
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhhHHHHHHHHHHHHHHhhc------CCCCcceeeeeeecCCce
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLERAFRSFDSECEVLRNV------RHRNLIKILSSYSNPDFK 343 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l------~h~niv~l~~~~~~~~~~ 343 (593)
..+|++.+.||+|+||.||+|... +++.||||+++... ...+.+.+|+++++.+ +|+||+++++++...+..
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 174 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI 174 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence 457999999999999999999865 68999999997643 3345677888888887 577999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCCC-CCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCc--EEEEeeccc
Q 007680 344 ALVLEFMPNGSLEKWLYSHNY-FLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMV--AHVSDFGIY 420 (593)
Q Consensus 344 ~lv~e~~~~gsL~~~l~~~~~-~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~--~kL~Dfg~a 420 (593)
++||||+. ++|.+++..... .+++..+..++.||+.||+|||+++ |+||||||+|||++.++. +||+|||++
T Consensus 175 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~----ivHrDlKp~NILl~~~~~~~vkL~DFG~a 249 (429)
T 3kvw_A 175 CMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNR----IIHCDLKPENILLKQQGRSGIKVIDFGSS 249 (429)
T ss_dssp EEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHT----EECSCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred EEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC----eecCCCCHHHeEEccCCCcceEEeecccc
Confidence 99999995 699999887653 5899999999999999999999665 999999999999999887 999999999
Q ss_pred eecCCCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCcc
Q 007680 421 KLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEM 478 (593)
Q Consensus 421 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~ 478 (593)
...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 250 ~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 250 CYEHQR-----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp EETTCC-----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred eecCCc-----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 765432 23356899999999999999999999999999999999999999764
No 212
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=1.8e-40 Score=339.01 Aligned_cols=253 Identities=25% Similarity=0.320 Sum_probs=199.3
Q ss_pred hhhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhh--------HHHHHHHHHHHHHHhhcCCCCcceeeeeeecC
Q 007680 270 ATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQL--------ERAFRSFDSECEVLRNVRHRNLIKILSSYSNP 340 (593)
Q Consensus 270 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 340 (593)
..++|++.+.||+|+||.||+|... +++.||||++.... ......+.+|++++++++||||+++++++...
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 87 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 87 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence 4578999999999999999999975 68999999986532 12234578999999999999999999998766
Q ss_pred CceEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCc---EEEEee
Q 007680 341 DFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMV---AHVSDF 417 (593)
Q Consensus 341 ~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~---~kL~Df 417 (593)
+ .++||||+++++|.+++.... .+++..+..++.|++.||+|||+++ |+||||||+||+++.++. +||+||
T Consensus 88 ~-~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~----ivH~dlkp~NIl~~~~~~~~~~kl~Df 161 (322)
T 2ycf_A 88 D-YYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQMLLAVQYLHENG----IIHRDLKPENVLLSSQEEDCLIKITDF 161 (322)
T ss_dssp S-EEEEEECCTTEETHHHHSTTC-CCCHHHHHHHHHHHHHHHHHHHHTT----EECCCCSGGGEEESSSSSSCCEEECCC
T ss_pred c-eEEEEecCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHCC----eeccCCCHHHEEEecCCCCCeEEEccC
Confidence 5 899999999999999987655 4999999999999999999999654 999999999999987654 999999
Q ss_pred ccceecCCCCCccccccccCCccccCccccC---CCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcC
Q 007680 418 GIYKLLGEGEDSVRQTMTMATIGYMAPEYGL---EGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLP 494 (593)
Q Consensus 418 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~ 494 (593)
|++....... ......||+.|+|||++. ...++.++|||||||++|+|++|+.||....... .....+.....
T Consensus 162 g~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~ 237 (322)
T 2ycf_A 162 GHSKILGETS---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV-SLKDQITSGKY 237 (322)
T ss_dssp TTCEECCCCH---HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS-CHHHHHHHTCC
T ss_pred ccceeccccc---ccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH-HHHHHHHhCcc
Confidence 9998765332 123346899999999863 5678999999999999999999999997643221 12222211111
Q ss_pred CchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 495 HGLTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
... ......++.++.+++.+||+.||++|||+.|+++|
T Consensus 238 ~~~--------------~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h 275 (322)
T 2ycf_A 238 NFI--------------PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 275 (322)
T ss_dssp CCC--------------HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred ccC--------------chhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhC
Confidence 000 01112345688999999999999999999999975
No 213
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=1.2e-41 Score=354.98 Aligned_cols=260 Identities=10% Similarity=0.054 Sum_probs=187.2
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhh---HHHHHHHHHHHHHHhhc--CCCCcceee-------eee
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQL---ERAFRSFDSECEVLRNV--RHRNLIKIL-------SSY 337 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l--~h~niv~l~-------~~~ 337 (593)
..+|++.+.||+|+||.||+|++. +|+.||+|+++... ....+.+.+|+.+++.+ +||||++++ +++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence 446999999999999999999975 78999999998743 34456778885555544 699988855 333
Q ss_pred ecC-----------------CceEEEEeccCCCCHHHHHhhCCCCCCHHHH------HHHHHHHHHHHHHHHhcCCCCCe
Q 007680 338 SNP-----------------DFKALVLEFMPNGSLEKWLYSHNYFLDILER------LNIMIDVGSALEYLHNGHSSVHI 394 (593)
Q Consensus 338 ~~~-----------------~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~------~~i~~~i~~~L~~LH~~~~~~~i 394 (593)
... ...++||||++ |+|.+++...+..+++..+ ..++.|++.||+|||+++ |
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~----i 215 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKG----L 215 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT----E
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCC----C
Confidence 322 23799999998 8999999875444555566 788899999999999655 9
Q ss_pred EecCCCCCCeeeCCCCcEEEEeeccceecCCCCCccccccccCCccccCccccCC--CCCCccchHHHHHHHHHHHHhCC
Q 007680 395 IHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLE--GIVSAKCDVYSYGVLLMETFTRK 472 (593)
Q Consensus 395 vH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~s~~~DvwSlGvvl~elltg~ 472 (593)
+||||||+|||++.++.+||+|||+++..... .....+|+.|+|||++.+ ..++.++|||||||++|||++|+
T Consensus 216 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~ 290 (371)
T 3q60_A 216 VHGHFTPDNLFIMPDGRLMLGDVSALWKVGTR-----GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLF 290 (371)
T ss_dssp EETTCSGGGEEECTTSCEEECCGGGEEETTCE-----EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSS
T ss_pred ccCcCCHHHEEECCCCCEEEEecceeeecCCC-----ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999876432 113456799999999987 67999999999999999999999
Q ss_pred CCCCccccccchHHHHHHHhcCCchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH--HHHh
Q 007680 473 RPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK--LKKI 550 (593)
Q Consensus 473 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~--L~~i 550 (593)
.||......... .................+....+++.+.+++.+||+.||++|||+.|+++| ++++
T Consensus 291 ~Pf~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~ 359 (371)
T 3q60_A 291 LPFGLVTPGIKG-----------SWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQL 359 (371)
T ss_dssp CSTTBCCTTCTT-----------CCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHHHH
T ss_pred CCCCCcCccccc-----------chhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHHHH
Confidence 999874322110 000000000000011111112446788999999999999999999999875 4444
Q ss_pred h
Q 007680 551 K 551 (593)
Q Consensus 551 ~ 551 (593)
.
T Consensus 360 ~ 360 (371)
T 3q60_A 360 Q 360 (371)
T ss_dssp H
T ss_pred H
Confidence 3
No 214
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=1.4e-40 Score=342.52 Aligned_cols=253 Identities=22% Similarity=0.292 Sum_probs=199.7
Q ss_pred hhhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhh-HHHHHHHHHHHHH-HhhcCCCCcceeeeeeecCCceEEE
Q 007680 270 ATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQL-ERAFRSFDSECEV-LRNVRHRNLIKILSSYSNPDFKALV 346 (593)
Q Consensus 270 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~lv 346 (593)
..++|++.+.||+|+||.||+|+.. +|+.||||+++... ......+..|..+ ++.++||||+++++++.+.+..++|
T Consensus 49 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 128 (340)
T 3an0_A 49 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 128 (340)
T ss_dssp CSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEE
T ss_pred ehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEE
Confidence 3568999999999999999999974 78999999997642 2233455555555 7778999999999999999999999
Q ss_pred EeccCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceec
Q 007680 347 LEFMPNGSLEKWLYS---HNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLL 423 (593)
Q Consensus 347 ~e~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~ 423 (593)
|||+++ +|.+++.. ....+++..+..++.|++.||+|||++ .+|+||||||+||+++.++.+||+|||++...
T Consensus 129 ~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 204 (340)
T 3an0_A 129 MELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK---LSVIHRDVKPSNVLINALGQVKMCDFGISGYL 204 (340)
T ss_dssp ECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCSCCSTTEEECSTTCEEECCCSHHHHH
T ss_pred HHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhc---CCeecCCCCHHHEEECCCCCEEEeeCCCceec
Confidence 999975 99988864 344699999999999999999999964 24999999999999999999999999999876
Q ss_pred CCCCCccccccccCCccccCccccC----CCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhh
Q 007680 424 GEGEDSVRQTMTMATIGYMAPEYGL----EGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTE 499 (593)
Q Consensus 424 ~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 499 (593)
.... ......||+.|+|||++. +..++.++|||||||++|||++|+.||.........+........+.
T Consensus 205 ~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~---- 277 (340)
T 3an0_A 205 VDSV---AKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQ---- 277 (340)
T ss_dssp SCHH---HHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCC----
T ss_pred cccc---ccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHHHHhcCCCCC----
Confidence 4321 223346999999999864 34789999999999999999999999976322221221111111100
Q ss_pred hhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 500 VVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
.....++.++.+++.+||+.||++|||+.|+++|
T Consensus 278 -------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 311 (340)
T 3an0_A 278 -------------LPADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 311 (340)
T ss_dssp -------------CCGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred -------------CCcccCCHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 0011245678999999999999999999999875
No 215
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.9e-41 Score=348.72 Aligned_cols=255 Identities=24% Similarity=0.280 Sum_probs=202.7
Q ss_pred hhccccccccCccCcccEEEEEe----CCCCeEEEEEeehhh----HHHHHHHHHHHHHHhhc-CCCCcceeeeeeecCC
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTI----SDGTDVAIKVFNLQL----ERAFRSFDSECEVLRNV-RHRNLIKILSSYSNPD 341 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 341 (593)
.++|++.+.||+|+||.||+|+. .+++.||||+++... ....+.+.+|+++++++ +||||+++++++...+
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 46899999999999999999997 378999999986532 22335577899999999 6999999999999999
Q ss_pred ceEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccce
Q 007680 342 FKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYK 421 (593)
Q Consensus 342 ~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~ 421 (593)
..++||||+++++|.+++..... +++.++..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~qi~~aL~~LH~~~----ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 207 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQRER-FTEHEVQIYVGEIVLALEHLHKLG----IIYRDIKLENILLDSNGHVVLTDFGLSK 207 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHHSC-CCHHHHHHHHHHHHHHHHHHHHTT----CCCCCCCGGGEEECTTSCEEESCSSEEE
T ss_pred eEEEEeecCCCCCHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCC----cccCCCCHHHEEECCCCcEEEeeCCCCe
Confidence 99999999999999999987654 899999999999999999999654 9999999999999999999999999998
Q ss_pred ecCCCCCccccccccCCccccCccccCC--CCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhh
Q 007680 422 LLGEGEDSVRQTMTMATIGYMAPEYGLE--GIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTE 499 (593)
Q Consensus 422 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 499 (593)
....... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... .........
T Consensus 208 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~-~~~~~~~~~------- 278 (355)
T 1vzo_A 208 EFVADET-ERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN-SQAEISRRI------- 278 (355)
T ss_dssp ECCGGGG-GGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCC-CHHHHHHHH-------
T ss_pred ecccCCC-CcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccc-hHHHHHHHH-------
Confidence 7643322 12234569999999999875 347899999999999999999999997532211 111111100
Q ss_pred hhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCC-----CHHHHHHHH
Q 007680 500 VVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRI-----NMTDAAAKL 547 (593)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~L 547 (593)
. .. ....+..++..+.+++.+||..||++|| +++|+++|.
T Consensus 279 -----~-~~--~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 279 -----L-KS--EPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp -----H-HC--CCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred -----h-cc--CCCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 0 00 0011123456789999999999999999 999999874
No 216
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=2.3e-40 Score=336.79 Aligned_cols=256 Identities=23% Similarity=0.324 Sum_probs=198.8
Q ss_pred HHHhhhccccccccCccCcccEEEEEeCCCCeEEEEEeehh--hHHHHHHHHHHHHHHhhcC--CCCcceeeeeeecCCc
Q 007680 267 IQRATDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQ--LERAFRSFDSECEVLRNVR--HRNLIKILSSYSNPDF 342 (593)
Q Consensus 267 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~ 342 (593)
+....++|++.+.||+|+||.||++...+++.||+|++... .....+.+.+|++++.+++ ||||+++++++...+.
T Consensus 23 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~ 102 (313)
T 3cek_A 23 MSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQY 102 (313)
T ss_dssp EEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSE
T ss_pred eeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCE
Confidence 33446789999999999999999999888999999999754 2445678899999999997 5999999999999999
Q ss_pred eEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeecccee
Q 007680 343 KALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKL 422 (593)
Q Consensus 343 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~ 422 (593)
.++||| +.+++|.+++..... +++.++..++.|+++||+|||+++ |+||||||+||++++ +.+||+|||++..
T Consensus 103 ~~lv~e-~~~~~L~~~l~~~~~-~~~~~~~~i~~qi~~aL~~LH~~~----ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~ 175 (313)
T 3cek_A 103 IYMVME-CGNIDLNSWLKKKKS-IDPWERKSYWKNMLEAVHTIHQHG----IVHSDLKPANFLIVD-GMLKLIDFGIANQ 175 (313)
T ss_dssp EEEEEC-CCSEEHHHHHHHCSS-CCHHHHHHHHHHHHHHHHHHHHTT----CCCCCCCGGGEEEET-TEEEECCCSSSCC
T ss_pred EEEEEe-cCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCC----ceecCCCcccEEEEC-CeEEEeecccccc
Confidence 999999 558899999987654 899999999999999999999654 999999999999965 8999999999987
Q ss_pred cCCCCCccccccccCCccccCccccCC-----------CCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHH
Q 007680 423 LGEGEDSVRQTMTMATIGYMAPEYGLE-----------GIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKE 491 (593)
Q Consensus 423 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~ 491 (593)
..............|++.|+|||++.+ ..++.++||||||+++|||++|+.||..............
T Consensus 176 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~-- 253 (313)
T 3cek_A 176 MQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII-- 253 (313)
T ss_dssp --------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHH--
T ss_pred ccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHH--
Confidence 654433222334568999999998765 4688999999999999999999999976432211111111
Q ss_pred hcCCchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 492 SLPHGLTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
+.... ...+...+.++.+++.+||+.||++|||+.|++++
T Consensus 254 ----------~~~~~-----~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 254 ----------DPNHE-----IEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp ----------CTTSC-----CCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ----------hcccc-----cCCcccchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 11000 00011124578999999999999999999999986
No 217
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=9.7e-41 Score=370.27 Aligned_cols=252 Identities=23% Similarity=0.350 Sum_probs=201.8
Q ss_pred cccCccCcccEEEEEeC---CCCeEEEEEeehhh--HHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEEEeccCC
Q 007680 278 NLLGTSSFGSVYKGTIS---DGTDVAIKVFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVLEFMPN 352 (593)
Q Consensus 278 ~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 352 (593)
+.||+|+||.||+|.+. +++.||||+++... ....+.+.+|++++++++||||+++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 47999999999999653 46789999998653 2345789999999999999999999999865 558899999999
Q ss_pred CCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCCCCCcc-c
Q 007680 353 GSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSV-R 431 (593)
Q Consensus 353 gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~-~ 431 (593)
|+|.+++..... +++.++..++.||+.||+|||+++ |+||||||+||+++.++.+||+|||+++.+....... .
T Consensus 454 g~L~~~l~~~~~-l~~~~~~~i~~qi~~~L~yLH~~~----iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 528 (635)
T 4fl3_A 454 GPLNKYLQQNRH-VKDKNIIELVHQVSMGMKYLEESN----FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 528 (635)
T ss_dssp EEHHHHHHHCTT-CCHHHHHHHHHHHHHHHHHHHHTT----CCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-------
T ss_pred CCHHHHHhhCCC-CCHHHHHHHHHHHHHHHHHHHHCC----EeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccccc
Confidence 999999987654 999999999999999999999655 9999999999999999999999999998775443221 1
Q ss_pred cccccCCccccCccccCCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccchHHHHHHHhcCCchhhhhhhhhhhhhh
Q 007680 432 QTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLVREEQ 510 (593)
Q Consensus 432 ~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (593)
.....+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... .....+....
T Consensus 529 ~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~--~~~~~i~~~~----------------- 589 (635)
T 4fl3_A 529 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--EVTAMLEKGE----------------- 589 (635)
T ss_dssp ------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHHHHHTTC-----------------
T ss_pred ccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCC-----------------
Confidence 233456788999999999999999999999999999998 99999774321 1111111110
Q ss_pred hhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhhh
Q 007680 511 AFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVKF 554 (593)
Q Consensus 511 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 554 (593)
....+..++.++.+++.+||+.||++||++.++++.|+++..+.
T Consensus 590 ~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~l 633 (635)
T 4fl3_A 590 RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDV 633 (635)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHh
Confidence 11112245678999999999999999999999999999886554
No 218
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2e-40 Score=347.05 Aligned_cols=272 Identities=21% Similarity=0.265 Sum_probs=200.5
Q ss_pred HHhhhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhhHHHHHHHHHHHHHHhhcCCCCcceeeeeeecC------
Q 007680 268 QRATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNP------ 340 (593)
Q Consensus 268 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------ 340 (593)
....++|++.+.||+|+||.||+|+.. +|+.||+|++..... ...+|+++++.++||||+++++++...
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 78 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK 78 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence 345678999999999999999999864 799999999875432 234699999999999999999998443
Q ss_pred --------------------------------CceEEEEeccCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHH
Q 007680 341 --------------------------------DFKALVLEFMPNGSLEKWLYS---HNYFLDILERLNIMIDVGSALEYL 385 (593)
Q Consensus 341 --------------------------------~~~~lv~e~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~i~~~L~~L 385 (593)
...++||||++ ++|.+.+.. ....+++..+..++.|+++||+||
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L 157 (383)
T 3eb0_A 79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFI 157 (383)
T ss_dssp -------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 34889999997 588777653 334599999999999999999999
Q ss_pred HhcCCCCCeEecCCCCCCeeeC-CCCcEEEEeeccceecCCCCCccccccccCCccccCccccCCC-CCCccchHHHHHH
Q 007680 386 HNGHSSVHIIHCDLKPTNILLD-ENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEG-IVSAKCDVYSYGV 463 (593)
Q Consensus 386 H~~~~~~~ivH~Dlkp~NIll~-~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DvwSlGv 463 (593)
|+ .||+||||||+||+++ .++.+||+|||+++.+..... .....+|+.|+|||++.+. .++.++||||+||
T Consensus 158 H~----~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~ 230 (383)
T 3eb0_A 158 HS----LGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP---SVAYICSRFYRAPELMLGATEYTPSIDLWSIGC 230 (383)
T ss_dssp HT----TTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC---CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHH
T ss_pred HH----CcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC---CcCcccCCCccCHHHhcCCCCCCcchhhhhHHH
Confidence 95 4599999999999997 688999999999987654432 2345689999999988765 4899999999999
Q ss_pred HHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhh--hh--------hhhhhhhhhhhHHHHHHHHHHHhhcccCC
Q 007680 464 LLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVD--AN--------LVREEQAFSAKMDCILSIMDFALDCCMES 533 (593)
Q Consensus 464 vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--------~~~~~~~~~~~~~~~~~l~~li~~cl~~d 533 (593)
++|||++|+.||...... ..+...+...-......+.. +. ..........+..++.++.+++.+||+.|
T Consensus 231 il~ell~g~~pf~~~~~~-~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d 309 (383)
T 3eb0_A 231 VFGELILGKPLFSGETSI-DQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYE 309 (383)
T ss_dssp HHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSS
T ss_pred HHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCC
Confidence 999999999999764222 12222221111111111100 00 00000001111234667899999999999
Q ss_pred CCCCCCHHHHHHH--HHHhhh
Q 007680 534 PDMRINMTDAAAK--LKKIKV 552 (593)
Q Consensus 534 P~~RPs~~evl~~--L~~i~~ 552 (593)
|++|||+.|+++| +++++.
T Consensus 310 P~~R~t~~e~l~hp~f~~~~~ 330 (383)
T 3eb0_A 310 PDLRINPYEAMAHPFFDHLRN 330 (383)
T ss_dssp GGGSCCHHHHHTSGGGHHHHH
T ss_pred hhhCCCHHHHhcCHHHHHHHh
Confidence 9999999999976 555543
No 219
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=2.2e-40 Score=348.08 Aligned_cols=266 Identities=21% Similarity=0.239 Sum_probs=202.4
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhhHHHHHHHHHHHHHHhhcC--------CCCcceeeeeee---
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLERAFRSFDSECEVLRNVR--------HRNLIKILSSYS--- 338 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--------h~niv~l~~~~~--- 338 (593)
.++|++.+.||+|+||.||+|+.. +++.||+|+++... ...+.+.+|+.++++++ |+||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAE-HYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCC-cchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 468999999999999999999865 68899999997542 34567889999999995 788999999987
Q ss_pred -cCCceEEEEeccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCC------
Q 007680 339 -NPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENM------ 410 (593)
Q Consensus 339 -~~~~~~lv~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~------ 410 (593)
.....++||||+ +++|.+++.... ..+++..+..++.||+.||+|||++ .+|+||||||+|||++.++
T Consensus 115 ~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~---~givHrDikp~NIll~~~~~~~~~~ 190 (397)
T 1wak_A 115 VNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTK---CRIIHTDIKPENILLSVNEQYIRRL 190 (397)
T ss_dssp TTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHT---TCEECCCCSGGGEEECCCHHHHHHH
T ss_pred CCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHeeEeccchhhhhh
Confidence 556899999999 566766665543 4699999999999999999999965 1599999999999999775
Q ss_pred -------------------------------------------cEEEEeeccceecCCCCCccccccccCCccccCcccc
Q 007680 411 -------------------------------------------VAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYG 447 (593)
Q Consensus 411 -------------------------------------------~~kL~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~ 447 (593)
.+||+|||.+...... .....||+.|+|||++
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-----~~~~~gt~~y~aPE~~ 265 (397)
T 1wak_A 191 AAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-----FTEDIQTRQYRSLEVL 265 (397)
T ss_dssp HHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC-----SCSCCSCGGGCCHHHH
T ss_pred hhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc-----CccCCCCCcccCChhh
Confidence 7999999999876532 2334689999999999
Q ss_pred CCCCCCccchHHHHHHHHHHHHhCCCCCCccccccc----hHHHHHHHhcCCchhhhh-hhhhh----------------
Q 007680 448 LEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEM----SLRRWVKESLPHGLTEVV-DANLV---------------- 506 (593)
Q Consensus 448 ~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~----~~~~~~~~~~~~~~~~~~-~~~~~---------------- 506 (593)
.+..++.++|||||||++|||++|+.||........ .................+ .....
T Consensus 266 ~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (397)
T 1wak_A 266 IGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKL 345 (397)
T ss_dssp HTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCC
T ss_pred cCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCcccccccccc
Confidence 999999999999999999999999999976432221 111111111100000000 00000
Q ss_pred -------hhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 507 -------REEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 507 -------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
............+..+.+|+.+||+.||++|||+.|+++|
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 346 KPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp CCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred CCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 0000111234567789999999999999999999999975
No 220
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=1e-39 Score=350.04 Aligned_cols=263 Identities=18% Similarity=0.233 Sum_probs=210.3
Q ss_pred hhccccccccCccCcccEEEEEe-CCCCeEEEEEeehhhHHHHHHHHHHHHHHhhcCC-CCcceeeeeeecCCceEEEEe
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTI-SDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRH-RNLIKILSSYSNPDFKALVLE 348 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~lv~e 348 (593)
.++|++.+.||+|+||.||+|++ .+++.||||++..... ...+..|+++++.++| +++..+..++...+..++|||
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme 83 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD 83 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence 46899999999999999999996 4799999999876532 2357889999999987 556666667778888999999
Q ss_pred ccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeee---CCCCcEEEEeeccceecCC
Q 007680 349 FMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILL---DENMVAHVSDFGIYKLLGE 425 (593)
Q Consensus 349 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll---~~~~~~kL~Dfg~a~~~~~ 425 (593)
|+ +++|.+++......+++.+++.++.||+.||+|||+++ |+||||||+|||+ +.++.+||+|||+++.+..
T Consensus 84 ~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g----IvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (483)
T 3sv0_A 84 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKS----FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRD 158 (483)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT----EECCCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred CC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC----EeecccCcceEEEecCCCCCeEEEEeCCcceeccC
Confidence 99 99999999876667999999999999999999999654 9999999999999 5889999999999998765
Q ss_pred CCCcc-----ccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccc--hHHHHHHHhcCCchh
Q 007680 426 GEDSV-----RQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEM--SLRRWVKESLPHGLT 498 (593)
Q Consensus 426 ~~~~~-----~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~--~~~~~~~~~~~~~~~ 498 (593)
..... ......||..|+|||++.+..++.++|||||||++|||++|+.||........ .+......
T Consensus 159 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~------- 231 (483)
T 3sv0_A 159 TSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK------- 231 (483)
T ss_dssp TTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHH-------
T ss_pred CccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhc-------
Confidence 43221 12245799999999999999999999999999999999999999987432211 11111110
Q ss_pred hhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhhh
Q 007680 499 EVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVKF 554 (593)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 554 (593)
.... ........++.++.+++.+||+.||++||++.++++.|+++....
T Consensus 232 -----~~~~--~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~ 280 (483)
T 3sv0_A 232 -----KVAT--SIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIRE 280 (483)
T ss_dssp -----HHHS--CHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred -----cccc--cHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHc
Confidence 0000 000111234678999999999999999999999999999986543
No 221
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.8e-41 Score=343.80 Aligned_cols=259 Identities=23% Similarity=0.302 Sum_probs=199.9
Q ss_pred CHHHHHHhhhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhhHHHHHHHHHHHHHHhhc-CCCCcceeeeeeec-
Q 007680 263 SYLDIQRATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLERAFRSFDSECEVLRNV-RHRNLIKILSSYSN- 339 (593)
Q Consensus 263 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~- 339 (593)
.+.++....++|++.+.||+|+||.||+|++. +|+.||+|++.... ...+.+.+|+.+++++ +||||+++++++..
T Consensus 15 ~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 93 (326)
T 2x7f_A 15 DLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKK 93 (326)
T ss_dssp -CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEEC
T ss_pred cchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeec
Confidence 33444556789999999999999999999974 78999999987543 2346788999999999 89999999999976
Q ss_pred -----CCceEEEEeccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEE
Q 007680 340 -----PDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAH 413 (593)
Q Consensus 340 -----~~~~~lv~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~k 413 (593)
.+..++||||+++++|.+++.... ..+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+|
T Consensus 94 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~----ivH~dlkp~NIl~~~~~~~k 169 (326)
T 2x7f_A 94 NPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK----VIHRDIKGQNVLLTENAEVK 169 (326)
T ss_dssp C--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT----CCCCCCSGGGEEECTTCCEE
T ss_pred cCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC----ccccCCcHHHEEEcCCCCEE
Confidence 467899999999999999998753 35899999999999999999999655 99999999999999999999
Q ss_pred EEeeccceecCCCCCccccccccCCccccCccccC-----CCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHH
Q 007680 414 VSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGL-----EGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRW 488 (593)
Q Consensus 414 L~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~ 488 (593)
|+|||++........ ......|++.|+|||++. +..++.++|||||||++|+|++|+.||....... ....
T Consensus 170 l~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~ 245 (326)
T 2x7f_A 170 LVDFGVSAQLDRTVG--RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR--ALFL 245 (326)
T ss_dssp ECCCTTTC---------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHH
T ss_pred EeeCcCceecCcCcc--ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHH--HHHH
Confidence 999999887643221 223346899999999986 5678999999999999999999999997632211 1111
Q ss_pred HHHhcCCchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 489 VKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
........ .....++..+.+++.+||..||++||++.|+++|
T Consensus 246 ~~~~~~~~----------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 287 (326)
T 2x7f_A 246 IPRNPAPR----------------LKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKH 287 (326)
T ss_dssp HHHSCCCC----------------CSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred hhcCcccc----------------CCccccCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 11100000 0011234578999999999999999999999985
No 222
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=9.6e-40 Score=335.40 Aligned_cols=263 Identities=21% Similarity=0.282 Sum_probs=204.3
Q ss_pred hhccccccccCccCcccEEEEEe-C-CCCeEEEEEeehhhHHHHHHHHHHHHHHhhcCCC------CcceeeeeeecCCc
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTI-S-DGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHR------NLIKILSSYSNPDF 342 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~-~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~------niv~l~~~~~~~~~ 342 (593)
.++|++.+.||+|+||.||+|.. . +++.||+|+++... ...+.+.+|+++++.++|+ +++++++++...+.
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~ 91 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH 91 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence 46899999999999999999986 3 68899999997543 3456788999999998765 49999999999999
Q ss_pred eEEEEeccCCCCHHHHHhhCCC-CCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCC-------------
Q 007680 343 KALVLEFMPNGSLEKWLYSHNY-FLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDE------------- 408 (593)
Q Consensus 343 ~~lv~e~~~~gsL~~~l~~~~~-~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~------------- 408 (593)
.++||||+ +++|.+++..... .+++.++..++.|++.||+|||+++ |+||||||+||+++.
T Consensus 92 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~----ivH~Dlkp~Nil~~~~~~~~~~~~~~~~ 166 (339)
T 1z57_A 92 ICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNK----LTHTDLKPENILFVQSDYTEAYNPKIKR 166 (339)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT----EECCCCCGGGEEESCCCEEEEEC----C
T ss_pred EEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCC----CcCCCCCHHHEEEeccccccccCCcccc
Confidence 99999999 8899999987653 5899999999999999999999654 999999999999987
Q ss_pred ------CCcEEEEeeccceecCCCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCcccccc
Q 007680 409 ------NMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGE 482 (593)
Q Consensus 409 ------~~~~kL~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~ 482 (593)
++.+||+|||++...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+
T Consensus 167 ~~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~ 241 (339)
T 1z57_A 167 DERTLINPDIKVVDFGSATYDDEH-----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKE 241 (339)
T ss_dssp EEEEESCCCEEECCCSSCEETTSC-----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHH
T ss_pred ccccccCCCceEeeCcccccCccc-----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHH
Confidence 668999999999875432 233468999999999999999999999999999999999999997643221
Q ss_pred chHHHHHHHh---cCCchhhhh-----------------------hhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCC
Q 007680 483 MSLRRWVKES---LPHGLTEVV-----------------------DANLVREEQAFSAKMDCILSIMDFALDCCMESPDM 536 (593)
Q Consensus 483 ~~~~~~~~~~---~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~ 536 (593)
....+... .+..+.... .................++++.+++.+||+.||++
T Consensus 242 --~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~ 319 (339)
T 1z57_A 242 --HLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAK 319 (339)
T ss_dssp --HHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTT
T ss_pred --HHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCccc
Confidence 11111111 111000000 00000000001112245678999999999999999
Q ss_pred CCCHHHHHHH
Q 007680 537 RINMTDAAAK 546 (593)
Q Consensus 537 RPs~~evl~~ 546 (593)
|||+.|+++|
T Consensus 320 Rpt~~ell~h 329 (339)
T 1z57_A 320 RITLREALKH 329 (339)
T ss_dssp SCCHHHHTTS
T ss_pred ccCHHHHhcC
Confidence 9999999876
No 223
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=1.9e-41 Score=345.65 Aligned_cols=266 Identities=21% Similarity=0.342 Sum_probs=203.2
Q ss_pred HHHHhhhccccccccCccCcccEEEEEeCCCCeEEEEEeehhh--HHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCce
Q 007680 266 DIQRATDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFK 343 (593)
Q Consensus 266 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 343 (593)
+.....++|++.+.||+|+||.||+|++. ..||+|+++... ....+.+.+|+.++++++||||+++++++.+.+..
T Consensus 27 ~~~i~~~~~~~~~~lg~G~~g~V~~~~~~--~~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 104 (319)
T 2y4i_B 27 EWDIPFEQLEIGELIGKGRFGQVYHGRWH--GEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHL 104 (319)
T ss_dssp GSSSCCSCEECCCBCCCSSSSEEEEEEES--SSEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCE
T ss_pred cccCCHHHeEEeeEeccCCceEEEEEEEc--CeEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCce
Confidence 33345678999999999999999999975 359999987542 22334577899999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceec
Q 007680 344 ALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLL 423 (593)
Q Consensus 344 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~ 423 (593)
++||||+++++|.+++...+..+++..+..++.|++.||+|||+++ |+||||||+||+++ ++.+||+|||++...
T Consensus 105 ~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~----i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~ 179 (319)
T 2y4i_B 105 AIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKG----ILHKDLKSKNVFYD-NGKVVITDFGLFSIS 179 (319)
T ss_dssp EEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTT----CCCCCCCSTTEEEC---CCEECCCSCCC--
T ss_pred EEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC----ccccCCChhhEEEe-CCCEEEeecCCcccc
Confidence 9999999999999999887767999999999999999999999655 99999999999998 679999999998765
Q ss_pred CCCCC---ccccccccCCccccCccccCC---------CCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHH
Q 007680 424 GEGED---SVRQTMTMATIGYMAPEYGLE---------GIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKE 491 (593)
Q Consensus 424 ~~~~~---~~~~~~~~gt~~y~aPE~~~~---------~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~ 491 (593)
..... ........|++.|+|||++.+ ..++.++||||||+++|||++|+.||....... .......
T Consensus 180 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~--~~~~~~~ 257 (319)
T 2y4i_B 180 GVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEA--IIWQMGT 257 (319)
T ss_dssp --------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHH--HHHHHHT
T ss_pred ccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHhcc
Confidence 32211 112233458999999998764 457899999999999999999999997642211 1111111
Q ss_pred hcCCchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhhhcc
Q 007680 492 SLPHGLTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVKFLD 556 (593)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~ 556 (593)
..... . ....++.++.+++.+||+.||++|||+.++++.|+++......
T Consensus 258 ~~~~~--------~--------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~~ 306 (319)
T 2y4i_B 258 GMKPN--------L--------SQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNRR 306 (319)
T ss_dssp TCCCC--------C--------CCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC------
T ss_pred CCCCC--------C--------CcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhhcc
Confidence 10000 0 0012345689999999999999999999999999999877533
No 224
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=1.2e-39 Score=329.35 Aligned_cols=254 Identities=23% Similarity=0.290 Sum_probs=195.2
Q ss_pred hhhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhhHHHHHHHHHHHHHHhhcCCCCcceeeeeeec---------
Q 007680 270 ATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSN--------- 339 (593)
Q Consensus 270 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--------- 339 (593)
..++|++.+.||+|+||.||+|+.. +++.||+|+++... ...+.+.+|+.++++++||||+++++++.+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT 82 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEH-HHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccH-HHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence 4678999999999999999999975 79999999997543 345778999999999999999999998754
Q ss_pred ----CCceEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEE
Q 007680 340 ----PDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVS 415 (593)
Q Consensus 340 ----~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 415 (593)
.+..++||||+++++|.+++......+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+
T Consensus 83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~----i~H~dlkp~Nil~~~~~~~kl~ 158 (303)
T 1zy4_A 83 AVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQG----IIHRDLKPMNIFIDESRNVKIG 158 (303)
T ss_dssp ---CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTT----CCCSCCCGGGEEECTTSCEEEC
T ss_pred ccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCC----eecccCCHHhEEEcCCCCEEEe
Confidence 35679999999999999999877767889999999999999999999655 9999999999999999999999
Q ss_pred eeccceecCCCCC------------ccccccccCCccccCccccCCC-CCCccchHHHHHHHHHHHHhCCCCCCcccccc
Q 007680 416 DFGIYKLLGEGED------------SVRQTMTMATIGYMAPEYGLEG-IVSAKCDVYSYGVLLMETFTRKRPTDEMFIGE 482 (593)
Q Consensus 416 Dfg~a~~~~~~~~------------~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~ 482 (593)
|||.+........ ........|++.|+|||++.+. .++.++|||||||++|||++ ||......
T Consensus 159 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~- 234 (303)
T 1zy4_A 159 DFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMER- 234 (303)
T ss_dssp CCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHH-
T ss_pred eCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhH-
Confidence 9999987643211 1112345689999999998764 68999999999999999998 55432111
Q ss_pred chHHHHHHHhcCCchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 483 MSLRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 483 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
......+..... ... .......+..+.+++.+||+.||++|||+.|+++|
T Consensus 235 ~~~~~~~~~~~~-~~~-------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 235 VNILKKLRSVSI-EFP-------------PDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp HHHHHHHHSTTC-CCC-------------TTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred HHHHHhcccccc-ccC-------------ccccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 111111111000 000 00112234568999999999999999999999985
No 225
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=1.1e-39 Score=337.48 Aligned_cols=268 Identities=24% Similarity=0.264 Sum_probs=201.7
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhh-HHHHHHHHHHHHHHhhcCCCCcceeeeeeecC-----Cce
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSYSNP-----DFK 343 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~ 343 (593)
.++|++.+.||+|+||.||+|++. +|+.||||+++... ......+.+|++++++++||||+++++++... ...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 568999999999999999999976 68999999996532 34456788999999999999999999987654 678
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceec
Q 007680 344 ALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLL 423 (593)
Q Consensus 344 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~ 423 (593)
++||||++ ++|.+++.... +++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++...
T Consensus 90 ~lv~e~~~-~~L~~~~~~~~--~~~~~~~~~~~qi~~~L~~LH~~~----ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~ 162 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVISTQM--LSDDHIQYFIYQTLRAVKVLHGSN----VIHRDLKPSNLLINSNCDLKVCDFGLARII 162 (353)
T ss_dssp EEEECCCS-EEHHHHHHHCC--CCHHHHHHHHHHHHHHHHHHHHTT----EECSCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEeccC-ccHHHHHhhcC--CCHHHHHHHHHHHHHHHHHHHHCC----eecCCCCHHHeEEcCCCcEEEEeccccccc
Confidence 99999996 69999998753 899999999999999999999654 999999999999999999999999999876
Q ss_pred CCCCCcc--------ccccccCCccccCccccCC-CCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHH-hc
Q 007680 424 GEGEDSV--------RQTMTMATIGYMAPEYGLE-GIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKE-SL 493 (593)
Q Consensus 424 ~~~~~~~--------~~~~~~gt~~y~aPE~~~~-~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~-~~ 493 (593)
....... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... ........ ..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~ 241 (353)
T 2b9h_A 163 DESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRH-QLLLIFGIIGT 241 (353)
T ss_dssp C----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCC
T ss_pred ccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHHHhCC
Confidence 5432111 1123468999999998654 679999999999999999999999997643211 11111110 00
Q ss_pred CC--c-hhhhhhhhhhh---------hhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 494 PH--G-LTEVVDANLVR---------EEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 494 ~~--~-~~~~~~~~~~~---------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
+. . ........... ..........+++++.+++.+||+.||++|||+.|+++|
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (353)
T 2b9h_A 242 PHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306 (353)
T ss_dssp CCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 00 0 00000000000 000001112456788999999999999999999999986
No 226
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=9.5e-40 Score=338.90 Aligned_cols=279 Identities=19% Similarity=0.221 Sum_probs=193.8
Q ss_pred HHHHHhhhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhhHHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCc-
Q 007680 265 LDIQRATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDF- 342 (593)
Q Consensus 265 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~- 342 (593)
.+.....++|++.+.||+|+||.||+|++. +|+.||||++.... .......+|++.+..++||||+++++++...+.
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 445667889999999999999999999975 78999999986542 223456678888899999999999999865433
Q ss_pred ------eEEEEeccCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCC-CCcE
Q 007680 343 ------KALVLEFMPNGSLEKWLYS---HNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDE-NMVA 412 (593)
Q Consensus 343 ------~~lv~e~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~-~~~~ 412 (593)
.++||||+++ +|.+.+.. ....+++..+..++.|++.||.|||.+ +.+|+||||||+||+++. ++.+
T Consensus 95 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~--~~~ivH~Dlkp~NIll~~~~~~~ 171 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLP--SVNVCHRDIKPHNVLVNEADGTL 171 (360)
T ss_dssp CTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTST--TTCCBCSCCCGGGEEEETTTTEE
T ss_pred cccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCC--CCCeecCcCCHHHEEEeCCCCcE
Confidence 7899999976 55554432 333589999999999999999999921 234999999999999996 8999
Q ss_pred EEEeeccceecCCCCCccccccccCCccccCccccCCC-CCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHH
Q 007680 413 HVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEG-IVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKE 491 (593)
Q Consensus 413 kL~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~ 491 (593)
||+|||++........ .....||+.|+|||++.+. .++.++|||||||++|||++|+.||....... .+......
T Consensus 172 kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~-~~~~~~~~ 247 (360)
T 3e3p_A 172 KLCDFGSAKKLSPSEP---NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAG-QLHEIVRV 247 (360)
T ss_dssp EECCCTTCBCCCTTSC---CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHH
T ss_pred EEeeCCCceecCCCCC---cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHH-HHHHHHHH
Confidence 9999999987654332 2345689999999988665 48999999999999999999999997743221 12222211
Q ss_pred hcCCc--hhhhhhhhhh-----------hhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH--HHHhh
Q 007680 492 SLPHG--LTEVVDANLV-----------REEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK--LKKIK 551 (593)
Q Consensus 492 ~~~~~--~~~~~~~~~~-----------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~--L~~i~ 551 (593)
..... ....+++... ............++++.+++.+||+.||++|||+.|+++| ++++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~ 322 (360)
T 3e3p_A 248 LGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELH 322 (360)
T ss_dssp HCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGG
T ss_pred cCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccC
Confidence 11100 1011100000 0000000111246789999999999999999999999987 44443
No 227
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=1.8e-39 Score=338.37 Aligned_cols=266 Identities=21% Similarity=0.269 Sum_probs=200.3
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehh--hHHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCce----
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQ--LERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFK---- 343 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~---- 343 (593)
.++|.+.+.||+|+||.||+|.+. +|+.||+|++... .....+.+.+|+.+++.++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 468999999999999999999965 7899999999764 234457788999999999999999999999877654
Q ss_pred --EEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccce
Q 007680 344 --ALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYK 421 (593)
Q Consensus 344 --~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~ 421 (593)
++||||++ ++|.+++.. .+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++
T Consensus 121 ~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~~----ivH~Dikp~NIll~~~~~~kL~Dfg~a~ 192 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMGM---EFSEEKIQYLVYQMLKGLKYIHSAG----VVHRDLKPGNLAVNEDCELKILDFGLAR 192 (371)
T ss_dssp CCEEEEECCC-EEHHHHTTS---CCCHHHHHHHHHHHHHHHHHHHHTT----CCCSCCCGGGEEECTTCCEEECSTTCC-
T ss_pred eEEEEEcccc-ccHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHHCC----CcCCCcCHHHeEECCCCCEEEEecCccc
Confidence 99999996 688888743 3899999999999999999999654 9999999999999999999999999998
Q ss_pred ecCCCCCccccccccCCccccCccccCC-CCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHh-cCC-chh
Q 007680 422 LLGEGEDSVRQTMTMATIGYMAPEYGLE-GIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKES-LPH-GLT 498 (593)
Q Consensus 422 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~-~~~-~~~ 498 (593)
..... .....+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||......+ .+....... .+. ...
T Consensus 193 ~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~ 266 (371)
T 4exu_A 193 HADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILKVTGVPGTEFV 266 (371)
T ss_dssp ------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCHHHH
T ss_pred ccccC-----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCcHHHH
Confidence 65432 233568999999999877 679999999999999999999999997642211 111111111 010 000
Q ss_pred hhhhhhhhh--------h--hhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH--HHHh
Q 007680 499 EVVDANLVR--------E--EQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK--LKKI 550 (593)
Q Consensus 499 ~~~~~~~~~--------~--~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~--L~~i 550 (593)
..+...... . .........+++.+.+|+.+||+.||++|||+.|+++| ++.+
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~ 330 (371)
T 4exu_A 267 QKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPF 330 (371)
T ss_dssp TTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTT
T ss_pred HHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCcccccC
Confidence 000000000 0 00001112346789999999999999999999999987 4444
No 228
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=1e-39 Score=327.90 Aligned_cols=253 Identities=24% Similarity=0.314 Sum_probs=204.5
Q ss_pred HhhhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhh--HHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEE
Q 007680 269 RATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKAL 345 (593)
Q Consensus 269 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 345 (593)
...++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 19 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 98 (287)
T 2wei_A 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI 98 (287)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred HHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEE
Confidence 34678999999999999999999976 78999999997653 2345678899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCC---CcEEEEeecccee
Q 007680 346 VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDEN---MVAHVSDFGIYKL 422 (593)
Q Consensus 346 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~---~~~kL~Dfg~a~~ 422 (593)
||||+++++|.+++..... +++.++..++.|++.||+|||+++ ++||||||+||+++.+ +.+||+|||++..
T Consensus 99 v~e~~~~~~L~~~l~~~~~-~~~~~~~~i~~qi~~~l~~LH~~~----i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~ 173 (287)
T 2wei_A 99 VGELYTGGELFDEIIKRKR-FSEHDAARIIKQVFSGITYMHKHN----IVHRDLKPENILLESKEKDCDIKIIDFGLSTC 173 (287)
T ss_dssp EECCCCSCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHTT----CCCSCCCGGGEEESCSSTTCCEEECSTTGGGT
T ss_pred EEEccCCCCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCC----eeccCCChhhEEEecCCCcccEEEeccCccee
Confidence 9999999999998876554 899999999999999999999654 9999999999999754 4799999999886
Q ss_pred cCCCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhh
Q 007680 423 LGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVD 502 (593)
Q Consensus 423 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 502 (593)
...... .....+++.|+|||++.+ .++.++||||||+++|+|++|+.||...... .....+......
T Consensus 174 ~~~~~~---~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~~------- 240 (287)
T 2wei_A 174 FQQNTK---MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY--DILKRVETGKYA------- 240 (287)
T ss_dssp BCCCSS---CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHCCCC-------
T ss_pred ecCCCc---cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHH--HHHHHHHcCCCC-------
Confidence 654322 223357889999998765 4899999999999999999999999763221 111111111000
Q ss_pred hhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 503 ANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
...+....++.++.+++.+||+.||++|||+.|++++
T Consensus 241 -------~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 277 (287)
T 2wei_A 241 -------FDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (287)
T ss_dssp -------CCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred -------CCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence 0011112345678999999999999999999999985
No 229
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=4.4e-39 Score=336.85 Aligned_cols=201 Identities=25% Similarity=0.320 Sum_probs=173.1
Q ss_pred HhhhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhhHHHHHHHHHHHHHHhhcC-CC-----CcceeeeeeecCC
Q 007680 269 RATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLERAFRSFDSECEVLRNVR-HR-----NLIKILSSYSNPD 341 (593)
Q Consensus 269 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~l~~~~~~~~ 341 (593)
...++|++.+.||+|+||.||+|... +++.||||+++... .....+..|+.+++.++ |+ +|+++++++...+
T Consensus 51 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~ 129 (382)
T 2vx3_A 51 KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRN 129 (382)
T ss_dssp EETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETT
T ss_pred EeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCC
Confidence 34678999999999999999999975 68899999997543 33466788999988885 55 4999999999999
Q ss_pred ceEEEEeccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeC--CCCcEEEEeec
Q 007680 342 FKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLD--ENMVAHVSDFG 418 (593)
Q Consensus 342 ~~~lv~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~--~~~~~kL~Dfg 418 (593)
..++||||++ ++|.+++.... ..+++..+..++.|++.||.|||.+ ..+|+||||||+||+++ .++.+||+|||
T Consensus 130 ~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~--~~~ivHrDlkp~NIll~~~~~~~~kL~DFG 206 (382)
T 2vx3_A 130 HLCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP--ELSIIHCDLKPENILLCNPKRSAIKIVDFG 206 (382)
T ss_dssp EEEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTST--TTCEECCCCSGGGEEESSTTSCCEEECCCT
T ss_pred ceEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccC--CCCEEcCCCCcccEEEecCCCCcEEEEecc
Confidence 9999999995 59999998764 3589999999999999999999953 24699999999999995 47789999999
Q ss_pred cceecCCCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCcc
Q 007680 419 IYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEM 478 (593)
Q Consensus 419 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~ 478 (593)
+++..... .....+|+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 207 ~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 207 SSCQLGQR-----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp TCEETTCC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred Cceecccc-----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 99876432 23356899999999999999999999999999999999999999864
No 230
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=8.6e-40 Score=343.38 Aligned_cols=269 Identities=22% Similarity=0.298 Sum_probs=197.3
Q ss_pred hhccccccccCccCcccEEEEEeCCCCeEEEEEeehhhHHHHHHHHHHHHHHhhcCCCCcceeeeeeecCC------ceE
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNPD------FKA 344 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------~~~ 344 (593)
..+|++.+.||+|+||.||+|+..++..||+|++..... ...+|+++++.++||||+++++++...+ ..+
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~ 114 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLN 114 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEE
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEE
Confidence 457999999999999999999987777799998865422 2246999999999999999999986543 378
Q ss_pred EEEeccCCCCHHHHHh--hCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeC-CCCcEEEEeeccce
Q 007680 345 LVLEFMPNGSLEKWLY--SHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLD-ENMVAHVSDFGIYK 421 (593)
Q Consensus 345 lv~e~~~~gsL~~~l~--~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~-~~~~~kL~Dfg~a~ 421 (593)
+||||++++.+..... .....+++..+..++.|++.||+|||+++ |+||||||+||+++ .++.+||+|||+++
T Consensus 115 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~----ivHrDlkp~Nill~~~~~~~kL~DFG~a~ 190 (394)
T 4e7w_A 115 LVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG----ICHRDIKPQNLLLDPPSGVLKLIDFGSAK 190 (394)
T ss_dssp EEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT----EECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC----ccCCCCCHHHEEEcCCCCcEEEeeCCCcc
Confidence 9999997643333221 22345999999999999999999999654 99999999999999 79999999999998
Q ss_pred ecCCCCCccccccccCCccccCccccCCC-CCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchh--
Q 007680 422 LLGEGEDSVRQTMTMATIGYMAPEYGLEG-IVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLT-- 498 (593)
Q Consensus 422 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~-- 498 (593)
....... .....+|+.|+|||++.+. .++.++||||+||++|||++|+.||.+.... ..+.......-.....
T Consensus 191 ~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~-~~l~~i~~~~g~p~~~~~ 266 (394)
T 4e7w_A 191 ILIAGEP---NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGI-DQLVEIIKVLGTPSREQI 266 (394)
T ss_dssp ECCTTCC---CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCHHHH
T ss_pred cccCCCC---CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHHH
Confidence 7654332 2345689999999988765 5999999999999999999999999774321 1122222111111000
Q ss_pred hhhhhhhh--------hhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH--HHHhh
Q 007680 499 EVVDANLV--------REEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK--LKKIK 551 (593)
Q Consensus 499 ~~~~~~~~--------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~--L~~i~ 551 (593)
...+.... ............++++.+++.+||+.||++|||+.|+++| +++++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 329 (394)
T 4e7w_A 267 KTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELR 329 (394)
T ss_dssp HHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTT
T ss_pred HhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhc
Confidence 00000000 0000001111245689999999999999999999999987 55443
No 231
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=332.01 Aligned_cols=253 Identities=22% Similarity=0.267 Sum_probs=184.9
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhh--HHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEEE
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALVL 347 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 347 (593)
.++|++.+.||+|+||.||+|.+. +|+.||||++.... ....+.+.++..+++.++||||+++++++.+.+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 578999999999999999999975 78999999997643 223344555566788889999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCCCC
Q 007680 348 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGE 427 (593)
Q Consensus 348 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~ 427 (593)
||+ ++.+..+.......+++..+..++.|++.||+|||++ .+|+||||||+||+++.++.+||+|||++.......
T Consensus 104 e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 179 (318)
T 2dyl_A 104 ELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEK---HGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK 179 (318)
T ss_dssp CCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHH---HCCCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred ecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhh---CCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCc
Confidence 999 5667666665455699999999999999999999963 149999999999999999999999999987664432
Q ss_pred CccccccccCCccccCccccC-----CCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhh
Q 007680 428 DSVRQTMTMATIGYMAPEYGL-----EGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVD 502 (593)
Q Consensus 428 ~~~~~~~~~gt~~y~aPE~~~-----~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 502 (593)
. .....+++.|+|||++. +..++.++||||||+++|||++|+.||................ .+.
T Consensus 180 ~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~-~~~------- 248 (318)
T 2dyl_A 180 A---KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQE-EPP------- 248 (318)
T ss_dssp ----------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHS-CCC-------
T ss_pred c---ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhcc-CCC-------
Confidence 1 23346899999999984 4568999999999999999999999997632222111111111 110
Q ss_pred hhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 503 ANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
..+....++.++.+++.+||+.||++||++.|+++|
T Consensus 249 --------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 249 --------LLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp --------CCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred --------CCCccCCCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 001111235678999999999999999999999986
No 232
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=2.9e-39 Score=359.78 Aligned_cols=263 Identities=20% Similarity=0.335 Sum_probs=209.6
Q ss_pred HHHHhhhccccccccCccCcccEEEEEeC----CCCeEEEEEeehhh-HHHHHHHHHHHHHHhhcCCCCcceeeeeeecC
Q 007680 266 DIQRATDEFNECNLLGTSSFGSVYKGTIS----DGTDVAIKVFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSYSNP 340 (593)
Q Consensus 266 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 340 (593)
+.....++|++.+.||+|+||.||+|.+. .+..||+|.++... ....+.+.+|+.++++++||||+++++++. .
T Consensus 384 ~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~ 462 (656)
T 2j0j_A 384 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-E 462 (656)
T ss_dssp GTBCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-S
T ss_pred ccccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-c
Confidence 33444578999999999999999999864 24579999987543 344578899999999999999999999985 4
Q ss_pred CceEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccc
Q 007680 341 DFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIY 420 (593)
Q Consensus 341 ~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 420 (593)
+..++||||+++|+|.+++......+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++
T Consensus 463 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~g----ivHrDikp~NILl~~~~~vkL~DFG~a 538 (656)
T 2j0j_A 463 NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKR----FVHRDIAARNVLVSSNDCVKLGDFGLS 538 (656)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTT----CCCSCCSGGGEEEEETTEEEECCCCCC
T ss_pred CceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC----ccccccchHhEEEeCCCCEEEEecCCC
Confidence 5689999999999999999877667999999999999999999999654 999999999999999999999999999
Q ss_pred eecCCCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccchHHHHHHHhcCCchhh
Q 007680 421 KLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRRWVKESLPHGLTE 499 (593)
Q Consensus 421 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 499 (593)
+....... .......+++.|+|||++.+..++.++|||||||++|||++ |..||.+.... .....+.....
T Consensus 539 ~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~--~~~~~i~~~~~----- 610 (656)
T 2j0j_A 539 RYMEDSTY-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN--DVIGRIENGER----- 610 (656)
T ss_dssp CSCCC-----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHHHHTCC-----
T ss_pred eecCCCcc-eeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH--HHHHHHHcCCC-----
Confidence 87654322 12233456789999999988899999999999999999997 99999764221 11111111110
Q ss_pred hhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhh
Q 007680 500 VVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVK 553 (593)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 553 (593)
.+.+..+++.+.+++.+||+.||++|||+.|+++.|+++...
T Consensus 611 ------------~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~ 652 (656)
T 2j0j_A 611 ------------LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 652 (656)
T ss_dssp ------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ------------CCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence 011223466889999999999999999999999999998643
No 233
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.6e-39 Score=342.79 Aligned_cols=269 Identities=21% Similarity=0.251 Sum_probs=184.8
Q ss_pred hhcccc-ccccCccCcccEEEEEeC---CCCeEEEEEeehhhHHHHHHHHHHHHHHhhcCCCCcceeeeeee--cCCceE
Q 007680 271 TDEFNE-CNLLGTSSFGSVYKGTIS---DGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYS--NPDFKA 344 (593)
Q Consensus 271 ~~~~~~-~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~~ 344 (593)
.+.|++ .++||+|+||.||+|+++ +++.||+|++.... ....+.+|+.++++++||||+++++++. .....+
T Consensus 19 ~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 96 (405)
T 3rgf_A 19 EDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVW 96 (405)
T ss_dssp HHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEE
T ss_pred hhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEE
Confidence 455776 458999999999999965 57899999997542 2346788999999999999999999995 467899
Q ss_pred EEEeccCCCCHHHHHhhCC--------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeee----CCCCcE
Q 007680 345 LVLEFMPNGSLEKWLYSHN--------YFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILL----DENMVA 412 (593)
Q Consensus 345 lv~e~~~~gsL~~~l~~~~--------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll----~~~~~~ 412 (593)
+||||++ ++|.+++.... ..+++..+..++.||+.||+|||+++ |+||||||+||++ +.++.+
T Consensus 97 lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~----ivH~Dlkp~NIll~~~~~~~~~~ 171 (405)
T 3rgf_A 97 LLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW----VLHRDLKPANILVMGEGPERGRV 171 (405)
T ss_dssp EEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTT----CCCCCCCGGGEEECCSSTTTTCE
T ss_pred EEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC----EeCCCcCHHHeEEecCCCCCCcE
Confidence 9999996 58888875321 14899999999999999999999655 9999999999999 677899
Q ss_pred EEEeeccceecCCCCCc-cccccccCCccccCccccCCC-CCCccchHHHHHHHHHHHHhCCCCCCcccccc--------
Q 007680 413 HVSDFGIYKLLGEGEDS-VRQTMTMATIGYMAPEYGLEG-IVSAKCDVYSYGVLLMETFTRKRPTDEMFIGE-------- 482 (593)
Q Consensus 413 kL~Dfg~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~-------- 482 (593)
||+|||+++........ .......||+.|+|||++.+. .++.++|||||||++|||++|+.||.......
T Consensus 172 kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~ 251 (405)
T 3rgf_A 172 KIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHH 251 (405)
T ss_dssp EECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCH
T ss_pred EEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchH
Confidence 99999999876543221 123345789999999998774 59999999999999999999999997542210
Q ss_pred chHHHHHHHh-cCCc--hhhhhh--------hhhhhhhhh--------hhhhHHHHHHHHHHHhhcccCCCCCCCCHHHH
Q 007680 483 MSLRRWVKES-LPHG--LTEVVD--------ANLVREEQA--------FSAKMDCILSIMDFALDCCMESPDMRINMTDA 543 (593)
Q Consensus 483 ~~~~~~~~~~-~~~~--~~~~~~--------~~~~~~~~~--------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev 543 (593)
..+....... .+.. +..... ......... .......+..+.+|+.+||+.||++|||++|+
T Consensus 252 ~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~ 331 (405)
T 3rgf_A 252 DQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQA 331 (405)
T ss_dssp HHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred HHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHH
Confidence 1111111110 0100 110000 000000000 00000114578899999999999999999999
Q ss_pred HHH
Q 007680 544 AAK 546 (593)
Q Consensus 544 l~~ 546 (593)
++|
T Consensus 332 L~h 334 (405)
T 3rgf_A 332 MQD 334 (405)
T ss_dssp HTS
T ss_pred hcC
Confidence 986
No 234
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=9.9e-40 Score=345.76 Aligned_cols=263 Identities=22% Similarity=0.286 Sum_probs=194.8
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhhHHHHHHHHHHHHHHhhcCCCCcceeeeeeecC------Cce
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSNP------DFK 343 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~~ 343 (593)
..+|++.+.||+|+||.||+|++. +|+.||||++.... ....+|++++++++||||+++++++... ...
T Consensus 53 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~ 128 (420)
T 1j1b_A 53 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL 128 (420)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEE
T ss_pred cceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeE
Confidence 347999999999999999999975 69999999986542 2234699999999999999999988532 236
Q ss_pred EEEEeccCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCC-CcEEEEeecc
Q 007680 344 ALVLEFMPNGSLEKWLYS---HNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDEN-MVAHVSDFGI 419 (593)
Q Consensus 344 ~lv~e~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~-~~~kL~Dfg~ 419 (593)
++||||+++ ++.+.+.. ....+++..+..++.||++||+|||++ +|+||||||+|||++.+ +.+||+|||+
T Consensus 129 ~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~----~ivHrDlkp~NILl~~~~~~~kl~DFG~ 203 (420)
T 1j1b_A 129 NLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF----GICHRDIKPQNLLLDPDTAVLKLCDFGS 203 (420)
T ss_dssp EEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT----TEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred Eeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC----CccccCCChhhEEEeCCCCeEEeccchh
Confidence 799999975 67666542 344699999999999999999999954 59999999999999955 6789999999
Q ss_pred ceecCCCCCccccccccCCccccCccccCCC-CCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchh
Q 007680 420 YKLLGEGEDSVRQTMTMATIGYMAPEYGLEG-IVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLT 498 (593)
Q Consensus 420 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 498 (593)
++.+..... .....+|+.|+|||++.+. .++.++|||||||++|||++|+.||.+.... ..+.+.+...-.....
T Consensus 204 a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~-~~l~~i~~~lg~p~~~ 279 (420)
T 1j1b_A 204 AKQLVRGEP---NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV-DQLVEIIKVLGTPTRE 279 (420)
T ss_dssp CEECCTTCC---CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCSCCHH
T ss_pred hhhcccCCC---ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHH
Confidence 987654332 2335689999999998765 7999999999999999999999999764221 1222222211111000
Q ss_pred hh--hhhhh--------hhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 499 EV--VDANL--------VREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 499 ~~--~~~~~--------~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
.+ .++.. ....-........++++.+|+.+||..||++|||+.|+++|
T Consensus 280 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h 337 (420)
T 1j1b_A 280 QIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 337 (420)
T ss_dssp HHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence 00 00000 00000000011235688999999999999999999999986
No 235
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=1.4e-39 Score=332.78 Aligned_cols=268 Identities=24% Similarity=0.302 Sum_probs=202.1
Q ss_pred hhhccccccccCccCcccEEEEEe--CCCCeEEEEEeehhhH--HHHHHHHHHHHHHhhc---CCCCcceeeeeee----
Q 007680 270 ATDEFNECNLLGTSSFGSVYKGTI--SDGTDVAIKVFNLQLE--RAFRSFDSECEVLRNV---RHRNLIKILSSYS---- 338 (593)
Q Consensus 270 ~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~l~~~~~---- 338 (593)
..++|++.+.||+|+||.||+|+. .+|+.||+|+++.... .....+.+|+.+++.+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 467899999999999999999997 3688999999875421 1223566777777766 8999999999987
Q ss_pred -cCCceEEEEeccCCCCHHHHHhhCCC-CCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEe
Q 007680 339 -NPDFKALVLEFMPNGSLEKWLYSHNY-FLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSD 416 (593)
Q Consensus 339 -~~~~~~lv~e~~~~gsL~~~l~~~~~-~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 416 (593)
.....++||||++ |+|.+++..... .+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~g----i~H~dlkp~Nili~~~~~~kl~D 163 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR----VVHRDLKPQNILVTSSGQIKLAD 163 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTT----CCCCCCCGGGEEECTTCCEEECS
T ss_pred CCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC----ceeccCCHHHeEEcCCCCEEEec
Confidence 5567899999997 699999987543 5899999999999999999999654 99999999999999999999999
Q ss_pred eccceecCCCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHh-cCC
Q 007680 417 FGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKES-LPH 495 (593)
Q Consensus 417 fg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~-~~~ 495 (593)
||.+....... ......+++.|+|||++.+..++.++||||||+++|+|++|+.||....... ......... .+.
T Consensus 164 fg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~~~~~ 239 (326)
T 1blx_A 164 FGLARIYSFQM---ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD-QLGKILDVIGLPG 239 (326)
T ss_dssp CCSCCCCCGGG---GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCC
T ss_pred CcccccccCCC---CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHH-HHHHHHHHcCCCC
Confidence 99998654322 2234568999999999999999999999999999999999999997643211 111111110 000
Q ss_pred c--hhhhhh---hhhh--hhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 496 G--LTEVVD---ANLV--REEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 496 ~--~~~~~~---~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
. +..... .... ...........++..+.+++.+||+.||++|||+.|+++|
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 297 (326)
T 1blx_A 240 EEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 297 (326)
T ss_dssp GGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 0 000000 0000 0000001112346688999999999999999999999975
No 236
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=4.7e-39 Score=332.61 Aligned_cols=263 Identities=21% Similarity=0.277 Sum_probs=201.1
Q ss_pred hhccccccccCccCcccEEEEEeC-CC-CeEEEEEeehhhHHHHHHHHHHHHHHhhcCCCC------cceeeeeeecCCc
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DG-TDVAIKVFNLQLERAFRSFDSECEVLRNVRHRN------LIKILSSYSNPDF 342 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~~~~~~~~~ 342 (593)
.++|++.+.||+|+||.||+|... ++ +.||+|+++... ...+.+.+|+.++++++|++ ++.+++++...+.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 96 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG-KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH 96 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc-cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence 468999999999999999999975 44 689999997543 34567888999999997655 8999999999999
Q ss_pred eEEEEeccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeee---------------
Q 007680 343 KALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILL--------------- 406 (593)
Q Consensus 343 ~~lv~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll--------------- 406 (593)
.++||||+ ++++.+++.... ..+++.++..++.|++.||+|||++ +|+||||||+||++
T Consensus 97 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~----~ivH~Dlkp~NIll~~~~~~~~~~~~~~~ 171 (355)
T 2eu9_A 97 MCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHEN----QLTHTDLKPENILFVNSEFETLYNEHKSC 171 (355)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTT----TEECCCCCGGGEEESCCCEEEEECCC-CC
T ss_pred EEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC----CcccCCCCHHHEEEecccccccccccccc
Confidence 99999999 667777776654 3699999999999999999999954 59999999999999
Q ss_pred ----CCCCcEEEEeeccceecCCCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCcccccc
Q 007680 407 ----DENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGE 482 (593)
Q Consensus 407 ----~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~ 482 (593)
+.++.+||+|||+++...... ....||+.|+|||++.+..++.++|||||||++|||++|+.||......+
T Consensus 172 ~~~~~~~~~~kl~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~ 246 (355)
T 2eu9_A 172 EEKSVKNTSIRVADFGSATFDHEHH-----TTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE 246 (355)
T ss_dssp CEEEESCCCEEECCCTTCEETTSCC-----CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred cccccCCCcEEEeecCccccccccc-----cCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 567899999999998754322 33568999999999999999999999999999999999999997643221
Q ss_pred chHHHHHHHh---cCCchhhhh-----------------------hhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCC
Q 007680 483 MSLRRWVKES---LPHGLTEVV-----------------------DANLVREEQAFSAKMDCILSIMDFALDCCMESPDM 536 (593)
Q Consensus 483 ~~~~~~~~~~---~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~ 536 (593)
....+... .+....... .................+.++.+++.+||+.||++
T Consensus 247 --~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~ 324 (355)
T 2eu9_A 247 --HLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQ 324 (355)
T ss_dssp --HHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTT
T ss_pred --HHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhh
Confidence 11111111 111100000 00000000000111234568899999999999999
Q ss_pred CCCHHHHHHH
Q 007680 537 RINMTDAAAK 546 (593)
Q Consensus 537 RPs~~evl~~ 546 (593)
|||+.|+++|
T Consensus 325 Rpt~~e~l~h 334 (355)
T 2eu9_A 325 RITLAEALLH 334 (355)
T ss_dssp SCCHHHHTTS
T ss_pred CcCHHHHhcC
Confidence 9999999976
No 237
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=4e-39 Score=335.80 Aligned_cols=265 Identities=19% Similarity=0.228 Sum_probs=200.2
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhhHHHHHHHHHHHHHHhhcC-----------CCCcceeeeeee
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLERAFRSFDSECEVLRNVR-----------HRNLIKILSSYS 338 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~l~~~~~ 338 (593)
.++|++.+.||+|+||.||+|+.. +++.||||++.... ...+.+.+|+.++++++ ||||+++++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 468999999999999999999964 78999999997543 33466788999999886 899999999987
Q ss_pred cCC----ceEEEEeccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeC------
Q 007680 339 NPD----FKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLD------ 407 (593)
Q Consensus 339 ~~~----~~~lv~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~------ 407 (593)
..+ ..++||||+ +++|.+++.... ..+++..+..++.||+.||+|||++ .+|+||||||+||+++
T Consensus 97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~---~~ivH~Dikp~NIll~~~~~~~ 172 (373)
T 1q8y_A 97 HKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRR---CGIIHTDIKPENVLMEIVDSPE 172 (373)
T ss_dssp EEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHT---TCEECSCCSGGGEEEEEEETTT
T ss_pred ccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhc---CCEEecCCChHHeEEeccCCCc
Confidence 654 789999999 889999998743 3589999999999999999999964 1499999999999994
Q ss_pred CCCcEEEEeeccceecCCCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCcccccc-----
Q 007680 408 ENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGE----- 482 (593)
Q Consensus 408 ~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~----- 482 (593)
..+.+||+|||++...... .....+|+.|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus 173 ~~~~~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~ 247 (373)
T 1q8y_A 173 NLIQIKIADLGNACWYDEH-----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDD 247 (373)
T ss_dssp TEEEEEECCCTTCEETTBC-----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHH
T ss_pred CcceEEEcccccccccCCC-----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChH
Confidence 4458999999999876532 233468999999999999999999999999999999999999997642211
Q ss_pred chHHHHHHHhcCCchhhhhhh-hh-----------------------hhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCC
Q 007680 483 MSLRRWVKESLPHGLTEVVDA-NL-----------------------VREEQAFSAKMDCILSIMDFALDCCMESPDMRI 538 (593)
Q Consensus 483 ~~~~~~~~~~~~~~~~~~~~~-~~-----------------------~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP 538 (593)
....... ............. .. ............++.++.+|+.+||+.||++||
T Consensus 248 ~~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp 326 (373)
T 1q8y_A 248 DHIAQII-ELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRA 326 (373)
T ss_dssp HHHHHHH-HHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCB
T ss_pred HHHHHHH-HhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccC
Confidence 1111111 1100000000000 00 000001112245678899999999999999999
Q ss_pred CHHHHHHH
Q 007680 539 NMTDAAAK 546 (593)
Q Consensus 539 s~~evl~~ 546 (593)
|+.|+++|
T Consensus 327 t~~ell~h 334 (373)
T 1q8y_A 327 DAGGLVNH 334 (373)
T ss_dssp CHHHHHTC
T ss_pred CHHHHhhC
Confidence 99999986
No 238
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=6.1e-40 Score=334.87 Aligned_cols=243 Identities=23% Similarity=0.259 Sum_probs=200.5
Q ss_pred HhhhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhhHH------HHHHHHHHHHHHhhcC--CCCcceeeeeeec
Q 007680 269 RATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLER------AFRSFDSECEVLRNVR--HRNLIKILSSYSN 339 (593)
Q Consensus 269 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~--h~niv~l~~~~~~ 339 (593)
...++|++.+.||+|+||.||+|+.. +++.||||+++..... ..+.+.+|+.++++++ ||||+++++++..
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~ 119 (320)
T 3a99_A 40 PLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER 119 (320)
T ss_dssp CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC
T ss_pred CccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEec
Confidence 34678999999999999999999864 7899999999765321 2245678999999996 5999999999999
Q ss_pred CCceEEEEeccCC-CCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeC-CCCcEEEEee
Q 007680 340 PDFKALVLEFMPN-GSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLD-ENMVAHVSDF 417 (593)
Q Consensus 340 ~~~~~lv~e~~~~-gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~-~~~~~kL~Df 417 (593)
++..++|||++.+ ++|.+++..... +++..+..++.|++.||+|||+++ |+||||||+||+++ +++.+||+||
T Consensus 120 ~~~~~lv~e~~~~~~~L~~~l~~~~~-l~~~~~~~i~~qi~~~L~~LH~~~----ivH~Dlkp~NIll~~~~~~~kL~Df 194 (320)
T 3a99_A 120 PDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQVLEAVRHCHNCG----VLHRDIKDENILIDLNRGELKLIDF 194 (320)
T ss_dssp SSEEEEEEECCSSEEEHHHHHHHHCS-CCHHHHHHHHHHHHHHHHHHHHTT----EECCCCSGGGEEEETTTTEEEECCC
T ss_pred CCcEEEEEEcCCCCccHHHHHhccCC-CCHHHHHHHHHHHHHHHHHHHHCC----cEeCCCCHHHEEEeCCCCCEEEeeC
Confidence 9999999999976 899999987554 899999999999999999999654 99999999999999 7899999999
Q ss_pred ccceecCCCCCccccccccCCccccCccccCCCCC-CccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCc
Q 007680 418 GIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIV-SAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHG 496 (593)
Q Consensus 418 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 496 (593)
|++....... .....||+.|+|||++.+..+ +.++||||||+++|||++|+.||.... ......
T Consensus 195 g~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-------~~~~~~---- 259 (320)
T 3a99_A 195 GSGALLKDTV----YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-------EIIRGQ---- 259 (320)
T ss_dssp TTCEECCSSC----BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-------HHHHCC----
T ss_pred cccccccccc----ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh-------hhhccc----
Confidence 9998765432 233468999999999877665 788999999999999999999996521 001000
Q ss_pred hhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 497 LTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
. .....++.++.+++.+||+.||++|||+.|++++
T Consensus 260 --------~-------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 260 --------V-------FFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp --------C-------CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred --------c-------cccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 0011235678999999999999999999999875
No 239
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=3.2e-39 Score=343.31 Aligned_cols=251 Identities=24% Similarity=0.295 Sum_probs=187.8
Q ss_pred ccccccccCccCcccEEEEEeCCCCeEEEEEeehhhHHHHHHHHHHHHHHhhc-CCCCcceeeeeeecCCceEEEEeccC
Q 007680 273 EFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNV-RHRNLIKILSSYSNPDFKALVLEFMP 351 (593)
Q Consensus 273 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~ 351 (593)
.|...+.||+|+||+||.+...+|+.||||++.... .+.+.+|+.+++++ +||||+++++++.+.+..++||||++
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~ 92 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF---CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN 92 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG---HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS
T ss_pred eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC
Confidence 455668899999999987766689999999987653 34578899999887 89999999999999999999999995
Q ss_pred CCCHHHHHhhCCCC------CCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCC-------------CcE
Q 007680 352 NGSLEKWLYSHNYF------LDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDEN-------------MVA 412 (593)
Q Consensus 352 ~gsL~~~l~~~~~~------l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~-------------~~~ 412 (593)
|+|.+++...... .++..+..++.||+.||+|||+++ |+||||||+||+++.+ +.+
T Consensus 93 -gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~----ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~ 167 (434)
T 2rio_A 93 -LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK----IIHRDLKPQNILVSTSSRFTADQQTGAENLRI 167 (434)
T ss_dssp -EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTT----EECCCCSGGGEEEECCHHHHSCCTTCCCSCEE
T ss_pred -CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCC----ccccCCChHhEEEecCcccccccccCCCceEE
Confidence 6999999875431 123345789999999999999654 9999999999999754 489
Q ss_pred EEEeeccceecCCCCCcc--ccccccCCccccCccccCC-------CCCCccchHHHHHHHHHHHHh-CCCCCCcccccc
Q 007680 413 HVSDFGIYKLLGEGEDSV--RQTMTMATIGYMAPEYGLE-------GIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGE 482 (593)
Q Consensus 413 kL~Dfg~a~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-------~~~s~~~DvwSlGvvl~ellt-g~~pf~~~~~~~ 482 (593)
||+|||+++......... ......||+.|+|||++.+ ..++.++|||||||++|||+| |+.||.......
T Consensus 168 kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~ 247 (434)
T 2rio_A 168 LISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE 247 (434)
T ss_dssp EECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH
T ss_pred EEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH
Confidence 999999999876543221 1234579999999999865 568999999999999999999 999997643221
Q ss_pred chHHHHHHHhcCCchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 483 MSLRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 483 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
........... .........++.++.+++.+||+.||++|||+.|+++|
T Consensus 248 ---~~i~~~~~~~~------------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 296 (434)
T 2rio_A 248 ---SNIIRGIFSLD------------EMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRH 296 (434)
T ss_dssp ---HHHHHTCCCCC------------CCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ---HHHhcCCCCcc------------cccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhC
Confidence 11111111000 00001112456788999999999999999999999874
No 240
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=7.8e-40 Score=332.70 Aligned_cols=245 Identities=24% Similarity=0.286 Sum_probs=192.3
Q ss_pred HHHhhhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhhH------HHHHHHHHHHHHHhhc----CCCCcceeee
Q 007680 267 IQRATDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLE------RAFRSFDSECEVLRNV----RHRNLIKILS 335 (593)
Q Consensus 267 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l----~h~niv~l~~ 335 (593)
.....++|++.+.||+|+||.||+|+.. +++.||+|+++.... .....+.+|+.++.++ +||||+++++
T Consensus 26 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~ 105 (312)
T 2iwi_A 26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLD 105 (312)
T ss_dssp -------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEE
T ss_pred hhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEE
Confidence 3445678999999999999999999864 789999999975431 1223456799999998 8999999999
Q ss_pred eeecCCceEEEEec-cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeC-CCCcEE
Q 007680 336 SYSNPDFKALVLEF-MPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLD-ENMVAH 413 (593)
Q Consensus 336 ~~~~~~~~~lv~e~-~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~-~~~~~k 413 (593)
++...+..++|||+ +.+++|.+++..... +++..+..++.|++.||+|||+++ |+||||||+||+++ .++.+|
T Consensus 106 ~~~~~~~~~~v~e~~~~~~~L~~~l~~~~~-~~~~~~~~~~~qi~~~l~~lH~~~----i~H~dlkp~Nil~~~~~~~~k 180 (312)
T 2iwi_A 106 WFETQEGFMLVLERPLPAQDLFDYITEKGP-LGEGPSRCFFGQVVAAIQHCHSRG----VVHRDIKDENILIDLRRGCAK 180 (312)
T ss_dssp EC-----CEEEEECCSSEEEHHHHHHHHCS-CCHHHHHHHHHHHHHHHHHHHHHT----EECCCCSGGGEEEETTTTEEE
T ss_pred EEecCCeEEEEEEecCCCCCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCC----eeecCCChhhEEEeCCCCeEE
Confidence 99999999999999 789999999987654 899999999999999999999765 99999999999999 889999
Q ss_pred EEeeccceecCCCCCccccccccCCccccCccccCCCCC-CccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHh
Q 007680 414 VSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIV-SAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKES 492 (593)
Q Consensus 414 L~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~ 492 (593)
|+|||++....... .....|+..|+|||++.+..+ +.++||||||+++|||++|+.||.... ....
T Consensus 181 l~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-------~~~~-- 247 (312)
T 2iwi_A 181 LIDFGSGALLHDEP----YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ-------EILE-- 247 (312)
T ss_dssp ECCCSSCEECCSSC----BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-------HHHH--
T ss_pred EEEcchhhhcccCc----ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH-------HHhh--
Confidence 99999998765432 233568999999998877665 458999999999999999999997521 0000
Q ss_pred cCCchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 493 LPHGLTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
... .....++.++.+++.+||+.||++|||+.|++++
T Consensus 248 ----------~~~-------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 248 ----------AEL-------HFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp ----------TCC-------CCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred ----------hcc-------CCcccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000 0011235578999999999999999999999985
No 241
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=5.4e-39 Score=332.49 Aligned_cols=262 Identities=21% Similarity=0.272 Sum_probs=197.4
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehh--hHHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCc-----
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQ--LERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDF----- 342 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----- 342 (593)
.++|.+.+.||+|+||.||+|.+. +|+.||||++... .....+.+.+|+.++++++||||+++++++...+.
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 467999999999999999999975 7899999999653 23445678899999999999999999999987654
Q ss_pred -eEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccce
Q 007680 343 -KALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYK 421 (593)
Q Consensus 343 -~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~ 421 (593)
.++||||++ ++|.+++.. .+++.++..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++.
T Consensus 103 ~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~al~~LH~~~----ivH~dlkp~NIl~~~~~~~kl~Dfg~~~ 174 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMGL---KFSEEKIQYLVYQMLKGLKYIHSAG----VVHRDLKPGNLAVNEDCELKILDFGLAR 174 (353)
T ss_dssp CCEEEEECCS-EEGGGTTTS---CCCHHHHHHHHHHHHHHHHHHHHTT----CCCSSCCGGGEEECTTCCEEECSTTCTT
T ss_pred eEEEEecccc-CCHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC----cccCCCCHHHEeECCCCcEEEeeccccc
Confidence 499999996 588887643 3899999999999999999999655 9999999999999999999999999987
Q ss_pred ecCCCCCccccccccCCccccCccccCC-CCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHh-cCC-chh
Q 007680 422 LLGEGEDSVRQTMTMATIGYMAPEYGLE-GIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKES-LPH-GLT 498 (593)
Q Consensus 422 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~-~~~-~~~ 498 (593)
..... .....+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||......+ .+....... .+. ...
T Consensus 175 ~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~ 248 (353)
T 3coi_A 175 HADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILKVTGVPGTEFV 248 (353)
T ss_dssp C-------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHH-HHHHHHHHHCBCCHHHH
T ss_pred CCCCC-----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHH
Confidence 65432 233468999999998876 678999999999999999999999997643211 111111100 000 000
Q ss_pred hhhhhh--------hhhh-hhh-hhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 499 EVVDAN--------LVRE-EQA-FSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 499 ~~~~~~--------~~~~-~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
..+... +... ... ......+++++.+++.+||+.||++|||+.|+++|
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 249 QKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp TTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 000000 0000 000 00112346789999999999999999999999986
No 242
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=2.1e-39 Score=331.86 Aligned_cols=255 Identities=22% Similarity=0.270 Sum_probs=179.2
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhh-HHHHHHHHHHHH-HHhhcCCCCcceeeeeeecCCceEEEE
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQL-ERAFRSFDSECE-VLRNVRHRNLIKILSSYSNPDFKALVL 347 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~ 347 (593)
.++|++.+.||+|+||.||+|... +|+.||||+++... ......+..|+. +++.++||||+++++++...+..++||
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 478999999999999999999975 78999999997642 233345555655 777789999999999999999999999
Q ss_pred eccCCCCHHHHHhh----CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceec
Q 007680 348 EFMPNGSLEKWLYS----HNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLL 423 (593)
Q Consensus 348 e~~~~gsL~~~l~~----~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~ 423 (593)
||+++ +|.+++.. ....+++..+..++.|++.||.|||++ .+|+||||||+||+++.++.+||+|||++...
T Consensus 101 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 176 (327)
T 3aln_A 101 ELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN---LKIIHRDIKPSNILLDRSGNIKLCDFGISGQL 176 (327)
T ss_dssp CCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHH---HSCCCSCCCGGGEEEETTTEEEECCCSSSCC-
T ss_pred eecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhcc---CCEeECCCCHHHEEEcCCCCEEEccCCCceec
Confidence 99975 88887763 234589999999999999999999975 14999999999999999999999999999876
Q ss_pred CCCCCccccccccCCccccCcccc----CCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhh
Q 007680 424 GEGEDSVRQTMTMATIGYMAPEYG----LEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTE 499 (593)
Q Consensus 424 ~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 499 (593)
.... ......||+.|+|||++ .+..++.++||||||+++|+|++|+.||........ ... .
T Consensus 177 ~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~----~~~--------~ 241 (327)
T 3aln_A 177 VDSI---AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFD----QLT--------Q 241 (327)
T ss_dssp --------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-----------C--------C
T ss_pred cccc---ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHH----HHH--------H
Confidence 4332 12334689999999998 456789999999999999999999999976321100 000 0
Q ss_pred hhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 500 VVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
........ ........+++++.+++.+||+.||++|||+.|++++
T Consensus 242 ~~~~~~~~--~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 286 (327)
T 3aln_A 242 VVKGDPPQ--LSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKH 286 (327)
T ss_dssp CCCSCCCC--CCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HhcCCCCC--CCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence 00000000 0000011245678999999999999999999999886
No 243
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=5.2e-39 Score=330.22 Aligned_cols=252 Identities=21% Similarity=0.251 Sum_probs=174.4
Q ss_pred hhcccccc-ccCccCcccEEEEEeC-CCCeEEEEEeehhhHHHHHHHHHHHHHHhhcCCCCcceeeeeeec----CCceE
Q 007680 271 TDEFNECN-LLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSYSN----PDFKA 344 (593)
Q Consensus 271 ~~~~~~~~-~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~ 344 (593)
.++|.+.+ .||+|+||.||+|.+. +|+.||+|++..... ...+....++.++||||+++++++.. ....+
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 102 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPK----ARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLL 102 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHH----HHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHH----HHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEE
Confidence 67899865 6999999999999976 799999999975422 11222334566799999999999876 44589
Q ss_pred EEEeccCCCCHHHHHhhCCC-CCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCC---CCcEEEEeeccc
Q 007680 345 LVLEFMPNGSLEKWLYSHNY-FLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDE---NMVAHVSDFGIY 420 (593)
Q Consensus 345 lv~e~~~~gsL~~~l~~~~~-~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~---~~~~kL~Dfg~a 420 (593)
+||||+++|+|.+++..... .+++.++..++.|++.||+|||+++ |+||||||+||+++. ++.+||+|||++
T Consensus 103 lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~----ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~ 178 (336)
T 3fhr_A 103 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHN----IAHRDVKPENLLYTSKEKDAVLKLTDFGFA 178 (336)
T ss_dssp EEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTT----EECSCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred EEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC----eecCCCCHHHEEEEecCCCceEEEeccccc
Confidence 99999999999999987643 6999999999999999999999655 999999999999986 456999999999
Q ss_pred eecCCCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhh
Q 007680 421 KLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEV 500 (593)
Q Consensus 421 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (593)
....... .....+|+.|+|||++.+..++.++||||||+++|+|++|+.||.......... ......
T Consensus 179 ~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~--~~~~~~------- 245 (336)
T 3fhr_A 179 KETTQNA----LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISP--GMKRRI------- 245 (336)
T ss_dssp EEC--------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-------------------------
T ss_pred eeccccc----cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhh--hHHHhh-------
Confidence 8754322 233568999999999988889999999999999999999999997643221100 000000
Q ss_pred hhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 501 VDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
..... ....+....++.++.+++.+||+.||++|||+.|+++|
T Consensus 246 ~~~~~---~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 288 (336)
T 3fhr_A 246 RLGQY---GFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNH 288 (336)
T ss_dssp --------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred hcccc---ccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 00000 00001112346688999999999999999999999986
No 244
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=5.3e-39 Score=340.86 Aligned_cols=251 Identities=22% Similarity=0.322 Sum_probs=189.6
Q ss_pred hhccccccccCccCcccEEEEEeCCCCeEEEEEeehhhHHHHHHHHHHHHHHhhc-CCCCcceeeeeeecCCceEEEEec
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNV-RHRNLIKILSSYSNPDFKALVLEF 349 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~ 349 (593)
..+|++.+.||+|+||+||.....+|+.||||++..... ..+.+|+++++++ +||||+++++++.+.+..++||||
T Consensus 23 ~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~ 99 (432)
T 3p23_A 23 KISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIEL 99 (432)
T ss_dssp TEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEEC
Confidence 457899999999999997665566799999999975432 2356799999999 799999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCC-----CCcEEEEeeccceecC
Q 007680 350 MPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDE-----NMVAHVSDFGIYKLLG 424 (593)
Q Consensus 350 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~-----~~~~kL~Dfg~a~~~~ 424 (593)
++ |+|.+++..........++..++.||+.||+|||+++ |+||||||+||+++. ...+||+|||+++...
T Consensus 100 ~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~----ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~ 174 (432)
T 3p23_A 100 CA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLN----IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLA 174 (432)
T ss_dssp CS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTT----CCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-
T ss_pred CC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCc----CEeCCCCHHHEEEecCCCCCceeEEEecccceeecc
Confidence 95 6999999877655666677899999999999999654 999999999999953 3368899999998775
Q ss_pred CCCCc-cccccccCCccccCccccC---CCCCCccchHHHHHHHHHHHHh-CCCCCCccccccchHHHHHHHhcCCchhh
Q 007680 425 EGEDS-VRQTMTMATIGYMAPEYGL---EGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFIGEMSLRRWVKESLPHGLTE 499 (593)
Q Consensus 425 ~~~~~-~~~~~~~gt~~y~aPE~~~---~~~~s~~~DvwSlGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 499 (593)
..... .......||+.|+|||++. ...++.++|||||||++|||++ |..||....... ......... ..
T Consensus 175 ~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~---~~~~~~~~~---~~ 248 (432)
T 3p23_A 175 VGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQ---ANILLGACS---LD 248 (432)
T ss_dssp -----------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHH---HHHHTTCCC---CT
T ss_pred CCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHH---HHHHhccCC---cc
Confidence 43321 1234457999999999987 4567889999999999999999 999996532111 111000000 00
Q ss_pred hhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 500 VVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
........+..+.+++.+||+.||++|||+.|+++|
T Consensus 249 -----------~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~h 284 (432)
T 3p23_A 249 -----------CLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKH 284 (432)
T ss_dssp -----------TSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred -----------ccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHhC
Confidence 000111234567899999999999999999999964
No 245
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=1.2e-38 Score=349.14 Aligned_cols=263 Identities=24% Similarity=0.287 Sum_probs=197.7
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehh-hHHHHHHHHHHHHHHhhcCCCCcceeeeeeec------CCc
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQ-LERAFRSFDSECEVLRNVRHRNLIKILSSYSN------PDF 342 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~~~ 342 (593)
.++|++.+.||+|+||.||+|.+. +|+.||||+++.. .....+.+.+|++++++++||||+++++++.. .+.
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 478999999999999999999974 6899999998754 34456778999999999999999999998765 667
Q ss_pred eEEEEeccCCCCHHHHHhhCCC--CCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCc---EEEEee
Q 007680 343 KALVLEFMPNGSLEKWLYSHNY--FLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMV---AHVSDF 417 (593)
Q Consensus 343 ~~lv~e~~~~gsL~~~l~~~~~--~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~---~kL~Df 417 (593)
.++||||+++|+|.+++..... .+++..+..++.|++.||+|||+++ |+||||||+||+++.++. +||+||
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~g----IVHrDLKP~NILl~~~g~~~~vKL~DF 168 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR----IIHRDLKPENIVLQPGPQRLIHKIIDL 168 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTT----BCCCCCCSTTEEEECCSSSCEEEECSC
T ss_pred EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC----CccCCCCHHHeEeecCCCceeEEEccc
Confidence 8999999999999999987543 5889999999999999999999654 999999999999997664 999999
Q ss_pred ccceecCCCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCc-
Q 007680 418 GIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHG- 496 (593)
Q Consensus 418 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~- 496 (593)
|.+........ .....||+.|+|||++.+..++.++||||||+++|+|++|..||...... ..|........
T Consensus 169 G~a~~~~~~~~---~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~----~~~~~~i~~~~~ 241 (676)
T 3qa8_A 169 GYAKELDQGEL---CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQP----VQWHGKVREKSN 241 (676)
T ss_dssp CCCCBTTSCCC---CCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHH----HHSSTTCC----
T ss_pred ccccccccccc---cccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccch----hhhhhhhhcccc
Confidence 99987654332 23457899999999999999999999999999999999999999653111 11100000000
Q ss_pred ----hhhhhhhhhhhh---hhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHH
Q 007680 497 ----LTEVVDANLVRE---EQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAA 544 (593)
Q Consensus 497 ----~~~~~~~~~~~~---~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 544 (593)
..+......... .........++..+.+++.+||..||++|||+.|++
T Consensus 242 ~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL 296 (676)
T 3qa8_A 242 EHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNP 296 (676)
T ss_dssp --CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCC
T ss_pred hhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHh
Confidence 000000000000 000011223567899999999999999999998854
No 246
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=1.4e-37 Score=312.12 Aligned_cols=234 Identities=11% Similarity=0.070 Sum_probs=186.2
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhh---HHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEE
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALV 346 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 346 (593)
.++|++.+.||+|+||.||+|++. +++.||+|+++... ....+.+.+|+.++.+++||||+++++++.+.+..|+|
T Consensus 30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 109 (286)
T 3uqc_A 30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVV 109 (286)
T ss_dssp TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEE
Confidence 367999999999999999999976 58999999997652 34457889999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCCC
Q 007680 347 LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEG 426 (593)
Q Consensus 347 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~ 426 (593)
|||++|++|.+++... ....++..++.|++.||+|||+++ |+||||||+||+++.++.+||+++|
T Consensus 110 ~e~~~g~~L~~~l~~~---~~~~~~~~i~~ql~~aL~~lH~~g----ivH~Dikp~NIll~~~g~~kl~~~~-------- 174 (286)
T 3uqc_A 110 AEWIRGGSLQEVADTS---PSPVGAIRAMQSLAAAADAAHRAG----VALSIDHPSRVRVSIDGDVVLAYPA-------- 174 (286)
T ss_dssp EECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTT----CCCCCCSGGGEEEETTSCEEECSCC--------
T ss_pred EEecCCCCHHHHHhcC---CChHHHHHHHHHHHHHHHHHHHCC----CccCCCCcccEEEcCCCCEEEEecc--------
Confidence 9999999999999543 466678999999999999999655 9999999999999999999998543
Q ss_pred CCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhhhhhh
Q 007680 427 EDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLV 506 (593)
Q Consensus 427 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (593)
|++ .++.++|||||||++|||+||+.||.......... .....+....
T Consensus 175 --------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~----------~~~~~~~~~~- 222 (286)
T 3uqc_A 175 --------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLA----------PAERDTAGQP- 222 (286)
T ss_dssp --------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSE----------ECCBCTTSCB-
T ss_pred --------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhH----------HHHHHhccCC-
Confidence 233 36889999999999999999999997642211000 0000000000
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhhhhh
Q 007680 507 REEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAKLKKIKVKF 554 (593)
Q Consensus 507 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 554 (593)
.........+++++.+++.+||+.||++| |+.|+++.|+++....
T Consensus 223 --~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~ 267 (286)
T 3uqc_A 223 --IEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVA 267 (286)
T ss_dssp --CCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC--
T ss_pred --CChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccC
Confidence 00001112356789999999999999999 9999999999987654
No 247
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.4e-37 Score=349.25 Aligned_cols=241 Identities=20% Similarity=0.276 Sum_probs=194.8
Q ss_pred hhccccccccCccCcccEEEEEeC--CCCeEEEEEeehh-hHHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCc-----
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS--DGTDVAIKVFNLQ-LERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDF----- 342 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----- 342 (593)
.++|++.+.||+|+||.||+|.+. +|+.||||++... .......+.+|++++++++||||+++++++...+.
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 478999999999999999999975 6899999998643 23455678899999999999999999999987665
Q ss_pred eEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeecccee
Q 007680 343 KALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKL 422 (593)
Q Consensus 343 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~ 422 (593)
.|+||||+++++|.+++.. .+++.++..++.||+.||+|||+++ |+||||||+||+++.+ .+||+|||+++.
T Consensus 159 ~~lv~E~~~g~~L~~~~~~---~l~~~~~~~~~~qi~~aL~~lH~~g----iiHrDlkp~NIll~~~-~~kl~DFG~a~~ 230 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKGQ---KLPVAEAIAYLLEILPALSYLHSIG----LVYNDLKPENIMLTEE-QLKLIDLGAVSR 230 (681)
T ss_dssp EEEEEECCCCEECC----C---CCCHHHHHHHHHHHHHHHHHHHHTT----EECCCCSGGGEEECSS-CEEECCCTTCEE
T ss_pred eEEEEEeCCCCcHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHCC----CeecccChHHeEEeCC-cEEEEecccchh
Confidence 7999999999999998765 4999999999999999999999654 9999999999999986 899999999987
Q ss_pred cCCCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhh
Q 007680 423 LGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVD 502 (593)
Q Consensus 423 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 502 (593)
.... ....||+.|+|||++.+.. +.++|||||||++|+|++|..||........ +.
T Consensus 231 ~~~~------~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~----------~~------- 286 (681)
T 2pzi_A 231 INSF------GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDGL----------PE------- 286 (681)
T ss_dssp TTCC------SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSSC----------CT-------
T ss_pred cccC------CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcccccccc----------cc-------
Confidence 6433 3356899999999886654 8999999999999999999998865321110 00
Q ss_pred hhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCC-HHHHHHHHHHhhh
Q 007680 503 ANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRIN-MTDAAAKLKKIKV 552 (593)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~evl~~L~~i~~ 552 (593)
.......++.+.+++.+||+.||++||+ ++++...|..+..
T Consensus 287 ---------~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~ 328 (681)
T 2pzi_A 287 ---------DDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLR 328 (681)
T ss_dssp ---------TCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHH
T ss_pred ---------cccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHHH
Confidence 0011123457899999999999999995 5666666766543
No 248
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=6.1e-37 Score=309.53 Aligned_cols=231 Identities=20% Similarity=0.289 Sum_probs=180.5
Q ss_pred hhccccc-cccCccCcccEEEEEeC-CCCeEEEEEeehhhHHHHHHHHHHHHHH-hhcCCCCcceeeeeeec----CCce
Q 007680 271 TDEFNEC-NLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLERAFRSFDSECEVL-RNVRHRNLIKILSSYSN----PDFK 343 (593)
Q Consensus 271 ~~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~l~~~~~~----~~~~ 343 (593)
.++|.+. +.||+|+||.||+|... +++.||+|+++.. ..+.+|+.++ +..+||||+++++++.. ....
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 90 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 90 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceE
Confidence 4678777 78999999999999974 7899999999743 3566788888 55589999999999876 6678
Q ss_pred EEEEeccCCCCHHHHHhhCCC-CCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCC---CCcEEEEeecc
Q 007680 344 ALVLEFMPNGSLEKWLYSHNY-FLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDE---NMVAHVSDFGI 419 (593)
Q Consensus 344 ~lv~e~~~~gsL~~~l~~~~~-~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~---~~~~kL~Dfg~ 419 (593)
++||||+++++|.+++..... .+++.++..++.|++.||+|||+++ |+||||||+||+++. ++.+||+|||+
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~----i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~ 166 (299)
T 3m2w_A 91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN----IAHRDVKPENLLYTSKRPNAILKLTDFGF 166 (299)
T ss_dssp EEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT----EECCCCSGGGEEESSSSTTCCEEECCCTT
T ss_pred EEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC----cccCCCCHHHEEEecCCCCCcEEEecccc
Confidence 999999999999999987653 6999999999999999999999654 999999999999998 78999999998
Q ss_pred ceecCCCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhh
Q 007680 420 YKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTE 499 (593)
Q Consensus 420 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 499 (593)
+.... +..++.++|||||||++|||++|+.||........ ...... .
T Consensus 167 a~~~~------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~------~~~~~~---~ 213 (299)
T 3m2w_A 167 AKETT------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI------SPGMKT---R 213 (299)
T ss_dssp CEECT------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------------CCSCC---S
T ss_pred ccccc------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhh------hHHHHH---H
Confidence 86432 24567899999999999999999999976321110 000000 0
Q ss_pred hhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 007680 500 VVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDAAAK 546 (593)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 546 (593)
...... .........+++++.+++.+||+.||++|||+.|+++|
T Consensus 214 ~~~~~~---~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 214 IRMGQY---EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp SCTTCC---SSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred Hhhccc---cCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 000000 00011112356789999999999999999999999986
No 249
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=1.4e-37 Score=328.47 Aligned_cols=247 Identities=15% Similarity=0.152 Sum_probs=184.7
Q ss_pred hhccccccccCccCcccEEEEEeC-CCCeEEEEEeehhh---HHHHHHHHHHHHHHhhcCC-CCcceee-----------
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQL---ERAFRSFDSECEVLRNVRH-RNLIKIL----------- 334 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h-~niv~l~----------- 334 (593)
...|...+.||+|+||.||+|++. +|+.||||+++... ....+.+.+|+.+++.++| +|.....
T Consensus 77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence 456888899999999999999964 79999999987432 2335778999999999977 3221111
Q ss_pred ----------eeeec-----CCceEEEEeccCCCCHHHHHh------hCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 007680 335 ----------SSYSN-----PDFKALVLEFMPNGSLEKWLY------SHNYFLDILERLNIMIDVGSALEYLHNGHSSVH 393 (593)
Q Consensus 335 ----------~~~~~-----~~~~~lv~e~~~~gsL~~~l~------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ 393 (593)
.++.. ....+++|+++ +++|.+++. .....+++..+..++.|+++||+|||+++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---- 231 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---- 231 (413)
T ss_dssp EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT----
T ss_pred cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCC----
Confidence 11111 12456777766 689999884 22335788899999999999999999654
Q ss_pred eEecCCCCCCeeeCCCCcEEEEeeccceecCCCCCccccccccCCccccCcccc----------CCCCCCccchHHHHHH
Q 007680 394 IIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYG----------LEGIVSAKCDVYSYGV 463 (593)
Q Consensus 394 ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~s~~~DvwSlGv 463 (593)
|+||||||+|||++.++.+||+|||+++..... .....| +.|+|||++ .+..++.++|||||||
T Consensus 232 iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGv 305 (413)
T 3dzo_A 232 LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS-----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGL 305 (413)
T ss_dssp EECSCCCGGGEEECTTCCEEECCGGGCEETTEE-----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHH
T ss_pred cccCCcccceEEEecCCeEEEEeccceeecCCc-----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHH
Confidence 999999999999999999999999998875432 233457 999999998 5566899999999999
Q ss_pred HHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHH
Q 007680 464 LLMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDFALDCCMESPDMRINMTDA 543 (593)
Q Consensus 464 vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev 543 (593)
++|||++|+.||......+. ....+. ....+++++.+++.+||+.||++||++.|+
T Consensus 306 il~elltg~~Pf~~~~~~~~-------------~~~~~~-----------~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~ 361 (413)
T 3dzo_A 306 AIYWIWCADLPNTDDAALGG-------------SEWIFR-----------SCKNIPQPVRALLEGFLRYPKEDRLLPLQA 361 (413)
T ss_dssp HHHHHHHSSCCCCTTGGGSC-------------SGGGGS-----------SCCCCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred HHHHHHHCCCCCCCcchhhh-------------HHHHHh-----------hcccCCHHHHHHHHHHccCChhhCcCHHHH
Confidence 99999999999976321110 000000 011235678999999999999999999888
Q ss_pred HHH--HHHhhh
Q 007680 544 AAK--LKKIKV 552 (593)
Q Consensus 544 l~~--L~~i~~ 552 (593)
+++ ++++..
T Consensus 362 l~~~~~~~~~~ 372 (413)
T 3dzo_A 362 METPEYEQLRT 372 (413)
T ss_dssp TTSHHHHHHHH
T ss_pred HhCHHHHHHHH
Confidence 765 444443
No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=8.1e-38 Score=321.40 Aligned_cols=244 Identities=18% Similarity=0.248 Sum_probs=185.3
Q ss_pred hhccccccccCccCcccEEEEEeCCCCeEEEEEeehhh--------HHHHHHHHHHHHHHhhcC---------CCCccee
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQL--------ERAFRSFDSECEVLRNVR---------HRNLIKI 333 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~---------h~niv~l 333 (593)
.++|++.+.||+|+||.||+|++ +|+.||||+++... ....+.+.+|+.+++.++ ||||+++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 57899999999999999999998 68999999998652 123367888999998886 6666655
Q ss_pred eee-----------------eec-------------CCceEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHH
Q 007680 334 LSS-----------------YSN-------------PDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALE 383 (593)
Q Consensus 334 ~~~-----------------~~~-------------~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~ 383 (593)
.+. +.+ .+..++||||+++|++.+.+.+ ..+++.++..++.||+.||+
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~--~~~~~~~~~~i~~qi~~aL~ 175 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT--KLSSLATAKSILHQLTASLA 175 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT--TCCCHHHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh--cCCCHHHHHHHHHHHHHHHH
Confidence 554 333 6789999999999977666644 34899999999999999999
Q ss_pred HHH-hcCCCCCeEecCCCCCCeeeCCCC--------------------cEEEEeeccceecCCCCCccccccccCCcccc
Q 007680 384 YLH-NGHSSVHIIHCDLKPTNILLDENM--------------------VAHVSDFGIYKLLGEGEDSVRQTMTMATIGYM 442 (593)
Q Consensus 384 ~LH-~~~~~~~ivH~Dlkp~NIll~~~~--------------------~~kL~Dfg~a~~~~~~~~~~~~~~~~gt~~y~ 442 (593)
||| +++ |+||||||+|||++.++ .+||+|||+|+..... ...||+.|+
T Consensus 176 ~lH~~~~----ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-------~~~gt~~y~ 244 (336)
T 2vuw_A 176 VAEASLR----FEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-------IVVFCDVSM 244 (336)
T ss_dssp HHHHHHC----CBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-------EEECCCCTT
T ss_pred HHHHhCC----EeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-------cEEEeeccc
Confidence 999 766 99999999999999887 8999999999876432 346999999
Q ss_pred CccccCCCCCCccchHHHHHHH-HHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhhhhhhhhhhhhhhhhHHHHHH
Q 007680 443 APEYGLEGIVSAKCDVYSYGVL-LMETFTRKRPTDEMFIGEMSLRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILS 521 (593)
Q Consensus 443 aPE~~~~~~~s~~~DvwSlGvv-l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 521 (593)
|||++.+.. +.++||||+|++ .+++++|..||.... |.... ...+.................++++
T Consensus 245 aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~--------~~~~~----~~~~~~~~~~~~~~~~~~~~~~s~~ 311 (336)
T 2vuw_A 245 DEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVL--------WLHYL----TDKMLKQMTFKTKCNTPAMKQIKRK 311 (336)
T ss_dssp CSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHH--------HHHHH----HHHHHHTCCCSSCCCSHHHHHHHHH
T ss_pred ChhhhcCCC-ccceehhhhhCCCCcccccccCCCcchh--------hhhHH----HHhhhhhhccCcccchhhhhhcCHH
Confidence 999988766 899999998777 778899999985411 10000 0000000000001111223456789
Q ss_pred HHHHHhhcccCCCCCCCCHHHHH-HH
Q 007680 522 IMDFALDCCMESPDMRINMTDAA-AK 546 (593)
Q Consensus 522 l~~li~~cl~~dP~~RPs~~evl-~~ 546 (593)
+.+|+.+||+.| |++|++ +|
T Consensus 312 ~~dli~~~L~~d-----sa~e~l~~H 332 (336)
T 2vuw_A 312 IQEFHRTMLNFS-----SATDLLCQH 332 (336)
T ss_dssp HHHHHHHGGGSS-----SHHHHHHHC
T ss_pred HHHHHHHHhccC-----CHHHHHhcC
Confidence 999999999976 999988 54
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.96 E-value=2.7e-30 Score=282.45 Aligned_cols=185 Identities=18% Similarity=0.075 Sum_probs=131.8
Q ss_pred ccCccCcccEEEEE-eCCCCeEEEEEeehh----------hHHHHHHHHHHHHHHhhc-CCCCcceeeeeeecCCceEEE
Q 007680 279 LLGTSSFGSVYKGT-ISDGTDVAIKVFNLQ----------LERAFRSFDSECEVLRNV-RHRNLIKILSSYSNPDFKALV 346 (593)
Q Consensus 279 ~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~----------~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 346 (593)
..+.|+.|.+..++ .-.|+.+|+|++... .+...+++.+|+++|+++ .|+||+++++++++.+..|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 46677777766665 336899999999753 234456799999999999 799999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCCC
Q 007680 347 LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEG 426 (593)
Q Consensus 347 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~ 426 (593)
|||++|++|.+++...+. ++.. +|+.||+.||+|+|++| |+||||||+|||++++|.+||+|||+|+.....
T Consensus 321 MEyv~G~~L~d~i~~~~~-l~~~---~I~~QIl~AL~ylH~~G----IIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~ 392 (569)
T 4azs_A 321 MEKLPGRLLSDMLAAGEE-IDRE---KILGSLLRSLAALEKQG----FWHDDVRPWNVMVDARQHARLIDFGSIVTTPQD 392 (569)
T ss_dssp EECCCSEEHHHHHHTTCC-CCHH---HHHHHHHHHHHHHHHTT----CEESCCCGGGEEECTTSCEEECCCTTEESCC--
T ss_pred EecCCCCcHHHHHHhCCC-CCHH---HHHHHHHHHHHHHHHCC----ceeccCchHhEEECCCCCEEEeecccCeeCCCC
Confidence 999999999999987654 6654 58899999999999665 999999999999999999999999999876543
Q ss_pred CCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCC
Q 007680 427 EDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRP 474 (593)
Q Consensus 427 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~p 474 (593)
.. .....+||+.|+|||++.+ .+..++|+||+|++++++.++..+
T Consensus 393 ~~--~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 393 CS--WPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp -C--CSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred Cc--cccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 32 2344679999999999865 467789999999998887666544
No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.93 E-value=1.6e-26 Score=251.16 Aligned_cols=186 Identities=18% Similarity=0.167 Sum_probs=146.0
Q ss_pred ccccccCccCcccEEEEEeCCCCeEEEEEeehhh--------HHHHHHHHHHHHHHhhcCCCCcceeeeeeecCCceEEE
Q 007680 275 NECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQL--------ERAFRSFDSECEVLRNVRHRNLIKILSSYSNPDFKALV 346 (593)
Q Consensus 275 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 346 (593)
...+.||+|+||.||+|.. .++.+++|...... ....+.+.+|++++++++||||+++..++...+..++|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 3457899999999999965 47889999864321 12345689999999999999999666666677788999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCCC
Q 007680 347 LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEG 426 (593)
Q Consensus 347 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~ 426 (593)
|||+++++|.+++.. +..++.|+++||+|||+++ |+||||||+||+++. .+||+|||+++.....
T Consensus 418 mE~~~ggsL~~~l~~---------~~~i~~qi~~aL~~LH~~g----IiHrDiKp~NILl~~--~~kL~DFGla~~~~~~ 482 (540)
T 3en9_A 418 MSYINGKLAKDVIED---------NLDIAYKIGEIVGKLHKND----VIHNDLTTSNFIFDK--DLYIIDFGLGKISNLD 482 (540)
T ss_dssp EECCCSEEHHHHSTT---------CTHHHHHHHHHHHHHHHTT----EECTTCCTTSEEESS--SEEECCCTTCEECCCH
T ss_pred EECCCCCCHHHHHHH---------HHHHHHHHHHHHHHHHHCc----CccCCCCHHHEEECC--eEEEEECccCEECCCc
Confidence 999999999999876 5689999999999999655 999999999999999 9999999999987543
Q ss_pred CCcc-----ccccccCCccccCccccCC--CCCCccchHHHHHHHHHHHHhCCCCCC
Q 007680 427 EDSV-----RQTMTMATIGYMAPEYGLE--GIVSAKCDVYSYGVLLMETFTRKRPTD 476 (593)
Q Consensus 427 ~~~~-----~~~~~~gt~~y~aPE~~~~--~~~s~~~DvwSlGvvl~elltg~~pf~ 476 (593)
.... ......||+.|+|||++.. ..|+..+|+||..+-..+-+.++.+|.
T Consensus 483 ~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 483 EDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred cccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 2211 1134579999999999887 568888999999999998888877764
No 253
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.92 E-value=1.2e-25 Score=255.80 Aligned_cols=195 Identities=41% Similarity=0.655 Sum_probs=125.0
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhh
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLL 80 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 80 (593)
|+.|+|++|++++.+|..+.. +++|++|+|++|+|++.+|..|+++++|+.|+|++|++++.+|..|+.+++|+.|+|+
T Consensus 468 L~~L~L~~N~l~~~~p~~l~~-l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls 546 (768)
T 3rgz_A 468 LETLILDFNDLTGEIPSGLSN-CTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLN 546 (768)
T ss_dssp CCEEECCSSCCCSCCCGGGGG-CTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECC
T ss_pred ceEEEecCCcccCcCCHHHhc-CCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECC
Confidence 456666666666666666554 6666777777777666666666666777777777777766666667777777766554
Q ss_pred cceeeccCCcccccCCC---------------------------------------------------------------
Q 007680 81 MFGIRLTGNKLYGRIPP--------------------------------------------------------------- 97 (593)
Q Consensus 81 ~n~l~l~~n~l~~~~~~--------------------------------------------------------------- 97 (593)
+| ++.|.+|.
T Consensus 547 ~N-------~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~ 619 (768)
T 3rgz_A 547 TN-------LFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRV 619 (768)
T ss_dssp SS-------EEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCE
T ss_pred CC-------ccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccce
Confidence 43 33322221
Q ss_pred -----------cccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCCCCccccCCccccccccccccccCCCCCC
Q 007680 98 -----------CLVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIPESVGSLISLESLDLSGNNLSGKIPKL 166 (593)
Q Consensus 98 -----------~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~l~~N~l~~~~p~~ 166 (593)
+..|++|+|++|+++|.+|..|+++++|+.|+|++|+++|.+|..++++++|+.|||++|+++|.+|..
T Consensus 620 ~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~ 699 (768)
T 3rgz_A 620 YGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQA 699 (768)
T ss_dssp EEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGG
T ss_pred ecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChH
Confidence 123566666666666666666666666666666666666666666666666666666666666666654
Q ss_pred CCC-----------------CCCCCCccCCCcccccCCccCCCCCCCCCCCCCCCCC
Q 007680 167 EGE-----------------IPVKGSFKNFSTESFFGNYALCGPPKLRVPPCKPDNS 206 (593)
Q Consensus 167 ~~~-----------------~~~~~~~~~~~~~~~~~n~~~c~~~~~~~~~~~~~~~ 206 (593)
+.. +|..+.+..+...+|.||+.+||.|. ++|.....
T Consensus 700 l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l---~~C~~~~~ 753 (768)
T 3rgz_A 700 MSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPL---PRCDPSNA 753 (768)
T ss_dssp GGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTS---CCCCSCC-
T ss_pred HhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCCC---cCCCCCcc
Confidence 332 34445677788889999999999863 37765444
No 254
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.91 E-value=1.8e-24 Score=219.57 Aligned_cols=186 Identities=27% Similarity=0.477 Sum_probs=137.1
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCC-Cchhhhh
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLR-HLSVLSL 79 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~l 79 (593)
|++|+|++|++++.+|..+.. +++|++|+|++|+|++.+|..|.++++|+.|+|++|++++.+|..|+.++ +|++|+|
T Consensus 103 L~~L~Ls~n~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L 181 (313)
T 1ogq_A 103 LHYLYITHTNVSGAIPDFLSQ-IKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTI 181 (313)
T ss_dssp CSEEEEEEECCEEECCGGGGG-CTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEEC
T ss_pred CCEEECcCCeeCCcCCHHHhC-CCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEEC
Confidence 567777777777667776664 77777777777777777777777777777777777777777777777777 7777766
Q ss_pred hccee----------------eccCCcccccCC----CcccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCCC
Q 007680 80 LMFGI----------------RLTGNKLYGRIP----PCLVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPI 139 (593)
Q Consensus 80 ~~n~l----------------~l~~n~l~~~~~----~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 139 (593)
++|.+ ++++|++.+.+| .+..|++|++++|++++.+|. +..+++|++|+|++|+|++.+
T Consensus 182 ~~N~l~~~~~~~~~~l~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~ 260 (313)
T 1ogq_A 182 SRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTL 260 (313)
T ss_dssp CSSEEEEECCGGGGGCCCSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECC
T ss_pred cCCeeeccCChHHhCCcccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcC
Confidence 65543 356666654333 334577777777777765554 777788888888888888778
Q ss_pred CccccCCccccccccccccccCCCCCCCCCCCCCCCccCCCcccccCCccCCCCCC
Q 007680 140 PESVGSLISLESLDLSGNNLSGKIPKLEGEIPVKGSFKNFSTESFFGNYALCGPPK 195 (593)
Q Consensus 140 p~~l~~~~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~~~~~~~~n~~~c~~~~ 195 (593)
|..+..+++|+.|++++|+++|.+|.. ..+.++....+.+|+.+|+.|.
T Consensus 261 p~~l~~l~~L~~L~Ls~N~l~~~ip~~-------~~l~~L~~l~l~~N~~lc~~p~ 309 (313)
T 1ogq_A 261 PQGLTQLKFLHSLNVSFNNLCGEIPQG-------GNLQRFDVSAYANNKCLCGSPL 309 (313)
T ss_dssp CGGGGGCTTCCEEECCSSEEEEECCCS-------TTGGGSCGGGTCSSSEEESTTS
T ss_pred ChHHhcCcCCCEEECcCCcccccCCCC-------ccccccChHHhcCCCCccCCCC
Confidence 888888888888888888888877664 3455666778999999999753
No 255
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.89 E-value=1.9e-23 Score=208.27 Aligned_cols=149 Identities=15% Similarity=0.121 Sum_probs=119.0
Q ss_pred HHhhhccccccccCccCcccEEEEEeCCCCeEEEEEeehhhH------------------HHHHHHHHHHHHHhhcCCCC
Q 007680 268 QRATDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLE------------------RAFRSFDSECEVLRNVRHRN 329 (593)
Q Consensus 268 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~E~~~l~~l~h~n 329 (593)
......|++.+.||+|+||.||+|.+.+|+.||+|+++.... .....+.+|++++++++ |
T Consensus 86 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~ 163 (282)
T 1zar_A 86 VRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G 163 (282)
T ss_dssp HHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T
T ss_pred HhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C
Confidence 334455677799999999999999997799999999964321 23567899999999999 4
Q ss_pred cceeeeeeecCCceEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCC
Q 007680 330 LIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDEN 409 (593)
Q Consensus 330 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~ 409 (593)
+++.+++.. +..++||||++|++|.+ +.. .+...++.|++.||+|||+++ |+||||||+||+++ +
T Consensus 164 -~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~-------~~~~~i~~qi~~~l~~lH~~g----iiHrDlkp~NILl~-~ 228 (282)
T 1zar_A 164 -LAVPKVYAW-EGNAVLMELIDAKELYR-VRV-------ENPDEVLDMILEEVAKFYHRG----IVHGDLSQYNVLVS-E 228 (282)
T ss_dssp -SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC-------SCHHHHHHHHHHHHHHHHHTT----EECSCCSTTSEEEE-T
T ss_pred -CCcCeEEec-cceEEEEEecCCCcHHH-cch-------hhHHHHHHHHHHHHHHHHHCC----CEeCCCCHHHEEEE-C
Confidence 666665543 56699999999999998 422 234579999999999999654 99999999999999 9
Q ss_pred CcEEEEeeccceecCCCCCccccccccCCccccCccccC
Q 007680 410 MVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGL 448 (593)
Q Consensus 410 ~~~kL~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 448 (593)
+.+||+|||+++. +..|+|||++.
T Consensus 229 ~~vkl~DFG~a~~---------------~~~~~a~e~l~ 252 (282)
T 1zar_A 229 EGIWIIDFPQSVE---------------VGEEGWREILE 252 (282)
T ss_dssp TEEEECCCTTCEE---------------TTSTTHHHHHH
T ss_pred CcEEEEECCCCeE---------------CCCCCHHHHHH
Confidence 9999999999874 23467888764
No 256
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.88 E-value=8.2e-22 Score=195.49 Aligned_cols=178 Identities=24% Similarity=0.245 Sum_probs=125.3
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhh
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLL 80 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 80 (593)
|+.|+|++|+++ .+|...+..+++|++|+|++|+|+...+..|.++++|++|+|++|++++..+..|..+++|++|
T Consensus 39 l~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L--- 114 (270)
T 2o6q_A 39 TKKLDLQSNKLS-SLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAEL--- 114 (270)
T ss_dssp CSEEECCSSCCS-CCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEE---
T ss_pred CCEEECcCCCCC-eeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEE---
Confidence 467777777777 5665444457777777777777775555556777777777777777776666667777777777
Q ss_pred cceeeccCCcccccC----CCcccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCCCCccccCCcccccccccc
Q 007680 81 MFGIRLTGNKLYGRI----PPCLVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIPESVGSLISLESLDLSG 156 (593)
Q Consensus 81 ~n~l~l~~n~l~~~~----~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~l~~ 156 (593)
++++|++++.. ..+..|++|+|++|+|++..+..|..+++|+.|+|++|++++..+..|..+++|+.|++++
T Consensus 115 ----~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 190 (270)
T 2o6q_A 115 ----RLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDN 190 (270)
T ss_dssp ----ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCS
T ss_pred ----ECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCC
Confidence 66667666432 3344588888888888765566677888888888888888866666677888888888888
Q ss_pred ccccCCCCCCCCCCCCCCCccCCCcccccCCccCCC
Q 007680 157 NNLSGKIPKLEGEIPVKGSFKNFSTESFFGNYALCG 192 (593)
Q Consensus 157 N~l~~~~p~~~~~~~~~~~~~~~~~~~~~~n~~~c~ 192 (593)
|++++.++..+..++ .+....+.+|++.|.
T Consensus 191 N~l~~~~~~~~~~l~------~L~~L~l~~N~~~c~ 220 (270)
T 2o6q_A 191 NQLKRVPEGAFDSLE------KLKMLQLQENPWDCT 220 (270)
T ss_dssp SCCSCCCTTTTTTCT------TCCEEECCSSCBCCS
T ss_pred CcCCcCCHHHhcccc------CCCEEEecCCCeeCC
Confidence 888876666555444 344556778887664
No 257
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.87 E-value=2.3e-22 Score=228.72 Aligned_cols=166 Identities=33% Similarity=0.518 Sum_probs=113.4
Q ss_pred cEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhhc
Q 007680 2 RILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLLM 81 (593)
Q Consensus 2 ~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~ 81 (593)
+.|+|++|.+++.+|..+.. +++|++|+|++|++++.+|..|.++++|+.|+|++|++++.+|..|+.+++|++|
T Consensus 445 ~~L~L~~n~l~~~~p~~~~~-l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L---- 519 (768)
T 3rgz_A 445 RDLKLWLNMLEGEIPQELMY-VKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAIL---- 519 (768)
T ss_dssp CEEECCSSCCCSCCCGGGGG-CTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEE----
T ss_pred CEEECCCCcccCcCCHHHcC-CCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEE----
Confidence 34444444444444444432 4445555555555544445455555555555555555554555555555555554
Q ss_pred ceeeccCCcccccCCCc----ccccEEEccCCcccCcCCCC---------------------------------------
Q 007680 82 FGIRLTGNKLYGRIPPC----LVLTVLDVSRNQLSGDIPST--------------------------------------- 118 (593)
Q Consensus 82 n~l~l~~n~l~~~~~~~----~~L~~L~l~~N~l~~~~p~~--------------------------------------- 118 (593)
++++|++.+.+|.. ..|++|++++|+++|.+|..
T Consensus 520 ---~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (768)
T 3rgz_A 520 ---KLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEF 596 (768)
T ss_dssp ---ECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEEC
T ss_pred ---ECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhcccccccccccccccccccccccccccc
Confidence 78888888777653 45999999999998777743
Q ss_pred -------------------------------CCCCCCCCEecCCCccCCCCCCccccCCccccccccccccccCCCCCCC
Q 007680 119 -------------------------------IGGRVDLETLSLASNQFQGPIPESVGSLISLESLDLSGNNLSGKIPKLE 167 (593)
Q Consensus 119 -------------------------------~~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~l~~N~l~~~~p~~~ 167 (593)
++.+++|+.|+|++|+++|.+|..++++++|+.|+|++|+++|.+|..+
T Consensus 597 ~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l 676 (768)
T 3rgz_A 597 QGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEV 676 (768)
T ss_dssp TTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGG
T ss_pred ccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHH
Confidence 3446789999999999999999999999999999999999999999987
Q ss_pred CCCCCCCC
Q 007680 168 GEIPVKGS 175 (593)
Q Consensus 168 ~~~~~~~~ 175 (593)
..++.+..
T Consensus 677 ~~L~~L~~ 684 (768)
T 3rgz_A 677 GDLRGLNI 684 (768)
T ss_dssp GGCTTCCE
T ss_pred hCCCCCCE
Confidence 77665433
No 258
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.87 E-value=7.5e-22 Score=209.98 Aligned_cols=183 Identities=26% Similarity=0.261 Sum_probs=111.7
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhh
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLL 80 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 80 (593)
|++|+|++|+|+ .++...+.++++|++|+|++|+|++..+..|.++++|+.|+|++|+|+...+..|..+++|++|+|+
T Consensus 90 L~~L~Ls~n~i~-~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~ 168 (440)
T 3zyj_A 90 LEILQLSRNHIR-TIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLG 168 (440)
T ss_dssp CCEEECCSSCCC-EECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEEECCCCcCC-ccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCC
Confidence 455555555555 3443333345556666666665554444455555666666666666554444455555555555444
Q ss_pred cc------------------eeeccCCcccccCC---CcccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCCC
Q 007680 81 MF------------------GIRLTGNKLYGRIP---PCLVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPI 139 (593)
Q Consensus 81 ~n------------------~l~l~~n~l~~~~~---~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 139 (593)
+| .+++++|+++ .+| .+..|++|+|++|+|++..|..|.++++|+.|+|++|+|++..
T Consensus 169 ~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 247 (440)
T 3zyj_A 169 ELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIPNLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIE 247 (440)
T ss_dssp CCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCCCCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEEC
T ss_pred CCCCcceeCcchhhcccccCeecCCCCcCc-cccccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEC
Confidence 31 1345555554 222 2334777777777777666777777777777777777777666
Q ss_pred CccccCCccccccccccccccCCCCCCCCCCCCCCCccCCCcccccCCccCC
Q 007680 140 PESVGSLISLESLDLSGNNLSGKIPKLEGEIPVKGSFKNFSTESFFGNYALC 191 (593)
Q Consensus 140 p~~l~~~~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~~~~~~~~n~~~c 191 (593)
+..|.++++|+.|+|++|++++.++..+..++ ++....+.+||+.|
T Consensus 248 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~------~L~~L~L~~Np~~C 293 (440)
T 3zyj_A 248 RNAFDNLQSLVEINLAHNNLTLLPHDLFTPLH------HLERIHLHHNPWNC 293 (440)
T ss_dssp TTSSTTCTTCCEEECTTSCCCCCCTTTTSSCT------TCCEEECCSSCEEC
T ss_pred hhhhcCCCCCCEEECCCCCCCccChhHhcccc------CCCEEEcCCCCccC
Confidence 77777777777788888877777666655444 34445677888776
No 259
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.87 E-value=1.3e-22 Score=205.73 Aligned_cols=156 Identities=30% Similarity=0.564 Sum_probs=102.5
Q ss_pred CcEEEeeC-ccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhh
Q 007680 1 MRILTLEG-NQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSL 79 (593)
Q Consensus 1 L~~L~Ls~-n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 79 (593)
|++|+|++ |++.+.+|..+.. +++|++|+|++|+|++.+|+.|.++++|++|+|++|++++.+|..|..+++|++|
T Consensus 78 L~~L~L~~~n~l~~~~p~~l~~-l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L-- 154 (313)
T 1ogq_A 78 LNFLYIGGINNLVGPIPPAIAK-LTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGI-- 154 (313)
T ss_dssp CSEEEEEEETTEESCCCGGGGG-CTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEE--
T ss_pred CCeeeCCCCCcccccCChhHhc-CCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeE--
Confidence 45666663 6666666666654 6677777777777766666667777777777777777766666667777777766
Q ss_pred hcceeeccCCcccccCCC----cc-cccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCCCCccccCCcccccccc
Q 007680 80 LMFGIRLTGNKLYGRIPP----CL-VLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIPESVGSLISLESLDL 154 (593)
Q Consensus 80 ~~n~l~l~~n~l~~~~~~----~~-~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~l 154 (593)
++++|++++.+|. +. .|++|++++|++++.+|..+..+. |+.|++++|++++.+|..+..+++|+.|++
T Consensus 155 -----~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 228 (313)
T 1ogq_A 155 -----TFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHL 228 (313)
T ss_dssp -----ECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEEC
T ss_pred -----ECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEEC
Confidence 5666666654443 22 467777777777666666666665 666777777666666666666666666666
Q ss_pred ccccccCCCCC
Q 007680 155 SGNNLSGKIPK 165 (593)
Q Consensus 155 ~~N~l~~~~p~ 165 (593)
++|++++.+|.
T Consensus 229 ~~N~l~~~~~~ 239 (313)
T 1ogq_A 229 AKNSLAFDLGK 239 (313)
T ss_dssp CSSEECCBGGG
T ss_pred CCCceeeecCc
Confidence 66666655544
No 260
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.87 E-value=1.6e-21 Score=191.27 Aligned_cols=174 Identities=26% Similarity=0.307 Sum_probs=150.1
Q ss_pred cEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhhc
Q 007680 2 RILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLLM 81 (593)
Q Consensus 2 ~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~ 81 (593)
+.+++++|+++ .+|..+. ++|+.|+|++|+|++..+..|.++++|+.|+|++|+|++..|..|..+++|++|
T Consensus 17 ~~l~~~~~~l~-~~p~~~~---~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L---- 88 (251)
T 3m19_A 17 KEVDCQGKSLD-SVPSGIP---ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTL---- 88 (251)
T ss_dssp TEEECTTCCCS-SCCSCCC---TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEE----
T ss_pred eEEecCCCCcc-ccCCCCC---CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEE----
Confidence 57999999999 8998765 589999999999998888899999999999999999998888889999999999
Q ss_pred ceeeccCCcccccC----CCcccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCCCCccccCCccccccccccc
Q 007680 82 FGIRLTGNKLYGRI----PPCLVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIPESVGSLISLESLDLSGN 157 (593)
Q Consensus 82 n~l~l~~n~l~~~~----~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~l~~N 157 (593)
++++|++.+.. ..+..|++|+|++|+|++..+..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 89 ---~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 165 (251)
T 3m19_A 89 ---GLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTN 165 (251)
T ss_dssp ---ECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred ---ECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCC
Confidence 77788877433 34556999999999999777777899999999999999999777778999999999999999
Q ss_pred cccCCCCCCCCCCCCCCCccCCCcccccCCccCCC
Q 007680 158 NLSGKIPKLEGEIPVKGSFKNFSTESFFGNYALCG 192 (593)
Q Consensus 158 ~l~~~~p~~~~~~~~~~~~~~~~~~~~~~n~~~c~ 192 (593)
++++.++..+..++ ++....+.+|+..|.
T Consensus 166 ~l~~~~~~~~~~l~------~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 166 QLQSVPHGAFDRLG------KLQTITLFGNQFDCS 194 (251)
T ss_dssp CCSCCCTTTTTTCT------TCCEEECCSCCBCTT
T ss_pred cCCccCHHHHhCCC------CCCEEEeeCCceeCC
Confidence 99998887666554 444567888888764
No 261
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.86 E-value=9.3e-22 Score=210.03 Aligned_cols=184 Identities=22% Similarity=0.189 Sum_probs=99.7
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhh
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLL 80 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 80 (593)
|+.|+|++|+|+ .++...+..+++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|..+++|++|+|+
T Consensus 77 l~~L~L~~n~i~-~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 155 (452)
T 3zyi_A 77 TRYLNLMENNIQ-MIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLR 155 (452)
T ss_dssp CSEEECCSSCCC-EECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECC
T ss_pred ccEEECcCCcCc-eECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECC
Confidence 456666666666 3333222336666666666666665555666666666666666666665555556666666666554
Q ss_pred cce------------------------------------------eeccCCcccc--cCCCcccccEEEccCCcccCcCC
Q 007680 81 MFG------------------------------------------IRLTGNKLYG--RIPPCLVLTVLDVSRNQLSGDIP 116 (593)
Q Consensus 81 ~n~------------------------------------------l~l~~n~l~~--~~~~~~~L~~L~l~~N~l~~~~p 116 (593)
+|. +++++|++.+ .+..+..|++|+|++|++++..|
T Consensus 156 ~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 235 (452)
T 3zyi_A 156 NNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDMPNLTPLVGLEELEMSGNHFPEIRP 235 (452)
T ss_dssp SCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSCCCCTTCTTCCEEECTTSCCSEECG
T ss_pred CCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccccccccccccccEEECcCCcCcccCc
Confidence 433 2233333331 11112235555555555554445
Q ss_pred CCCCCCCCCCEecCCCccCCCCCCccccCCccccccccccccccCCCCCCCCCCCCCCCccCCCcccccCCccCC
Q 007680 117 STIGGRVDLETLSLASNQFQGPIPESVGSLISLESLDLSGNNLSGKIPKLEGEIPVKGSFKNFSTESFFGNYALC 191 (593)
Q Consensus 117 ~~~~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~~~~~~~~n~~~c 191 (593)
..|.++++|+.|+|++|++++..|..|.++++|+.|+|++|++++.++..+..++ ++....+.+|++.|
T Consensus 236 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~------~L~~L~L~~Np~~C 304 (452)
T 3zyi_A 236 GSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLR------YLVELHLHHNPWNC 304 (452)
T ss_dssp GGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCT------TCCEEECCSSCEEC
T ss_pred ccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhcccc------CCCEEEccCCCcCC
Confidence 5555555555555555555555555555555666666666666555555444333 33445666777665
No 262
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.85 E-value=4.1e-21 Score=191.96 Aligned_cols=165 Identities=24% Similarity=0.201 Sum_probs=122.9
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCc-ccccccccccCCCCchhhhh
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNS-FSGHILNTFGNLRHLSVLSL 79 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~l 79 (593)
|+.|+|++|+++ .+|...+..+++|++|+|++|+|++..|..|.++++|+.|+|++|. ++...|..|..+++|++|
T Consensus 34 l~~L~l~~n~i~-~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L-- 110 (285)
T 1ozn_A 34 SQRIFLHGNRIS-HVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL-- 110 (285)
T ss_dssp CSEEECTTSCCC-EECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEE--
T ss_pred ceEEEeeCCcCC-ccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEE--
Confidence 577888888888 5665544458888888888888887778888888888888888886 776667778888888888
Q ss_pred hcceeeccCCccccc----CCCcccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCCCCccccCCccccccccc
Q 007680 80 LMFGIRLTGNKLYGR----IPPCLVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIPESVGSLISLESLDLS 155 (593)
Q Consensus 80 ~~n~l~l~~n~l~~~----~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~l~ 155 (593)
++++|++.+. +..+..|++|++++|++++..+..|.++++|+.|++++|++++..+..+..+++|+.|+++
T Consensus 111 -----~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 185 (285)
T 1ozn_A 111 -----HLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLH 185 (285)
T ss_dssp -----ECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred -----ECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECC
Confidence 6666666643 3334558888888888876666667778888888888888875555567778888888888
Q ss_pred cccccCCCCCCCCCCCCC
Q 007680 156 GNNLSGKIPKLEGEIPVK 173 (593)
Q Consensus 156 ~N~l~~~~p~~~~~~~~~ 173 (593)
+|++++..|..+..++.+
T Consensus 186 ~n~l~~~~~~~~~~l~~L 203 (285)
T 1ozn_A 186 QNRVAHVHPHAFRDLGRL 203 (285)
T ss_dssp SSCCCEECTTTTTTCTTC
T ss_pred CCcccccCHhHccCcccc
Confidence 888887777766555443
No 263
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.85 E-value=5.5e-21 Score=187.39 Aligned_cols=156 Identities=26% Similarity=0.285 Sum_probs=138.0
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhh
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLL 80 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 80 (593)
|+.|+|++|+++ .++...+..+++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|..+++|++|
T Consensus 37 l~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L--- 112 (251)
T 3m19_A 37 TEKLDLQSTGLA-TLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKL--- 112 (251)
T ss_dssp CCEEECTTSCCC-CCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEE---
T ss_pred CCEEEccCCCcC-ccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEE---
Confidence 678999999999 5665544469999999999999998888889999999999999999998888889999999999
Q ss_pred cceeeccCCcccccC----CCcccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCCCCccccCCcccccccccc
Q 007680 81 MFGIRLTGNKLYGRI----PPCLVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIPESVGSLISLESLDLSG 156 (593)
Q Consensus 81 ~n~l~l~~n~l~~~~----~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~l~~ 156 (593)
++++|++++.. ..+..|++|+|++|+|++..+..|.++++|+.|+|++|+|++..+..+..+++|+.|++++
T Consensus 113 ----~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 188 (251)
T 3m19_A 113 ----YLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFG 188 (251)
T ss_dssp ----ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCS
T ss_pred ----EcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeC
Confidence 78888887433 3455699999999999977777899999999999999999988788899999999999999
Q ss_pred ccccCCCC
Q 007680 157 NNLSGKIP 164 (593)
Q Consensus 157 N~l~~~~p 164 (593)
|+++....
T Consensus 189 N~~~c~~~ 196 (251)
T 3m19_A 189 NQFDCSRC 196 (251)
T ss_dssp CCBCTTST
T ss_pred CceeCCcc
Confidence 99988643
No 264
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.85 E-value=2e-21 Score=198.32 Aligned_cols=159 Identities=22% Similarity=0.267 Sum_probs=104.9
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccC---------C
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGN---------L 71 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~---------l 71 (593)
|++|+|++|+++ .+|..+.. +++|++|+|++|+|+ .+|..|.++++|+.|+|++|++.+.+|..+.. +
T Consensus 106 L~~L~L~~n~l~-~lp~~~~~-l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l 182 (328)
T 4fcg_A 106 LQHMTIDAAGLM-ELPDTMQQ-FAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGL 182 (328)
T ss_dssp CSEEEEESSCCC-CCCSCGGG-GTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEES
T ss_pred CCEEECCCCCcc-chhHHHhc-cCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhccC
Confidence 678888888888 78877765 888888888888888 67888888888888888887777777776554 7
Q ss_pred CCchhhhhhcceeeccCCcccccCC----CcccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCCCCccccCCc
Q 007680 72 RHLSVLSLLMFGIRLTGNKLYGRIP----PCLVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIPESVGSLI 147 (593)
Q Consensus 72 ~~L~~L~l~~n~l~l~~n~l~~~~~----~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~~~ 147 (593)
++|++|+| ++|+++ .+| .+..|++|+|++|++++ +|..++.+++|+.|++++|++.+.+|..+..++
T Consensus 183 ~~L~~L~L-------~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~ 253 (328)
T 4fcg_A 183 VNLQSLRL-------EWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRA 253 (328)
T ss_dssp TTCCEEEE-------EEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCC
T ss_pred CCCCEEEC-------cCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhcCCC
Confidence 78888844 444443 222 23346666666666653 444455566666666666665555666666666
Q ss_pred cccccccccccccCCCCCCCCCCC
Q 007680 148 SLESLDLSGNNLSGKIPKLEGEIP 171 (593)
Q Consensus 148 ~L~~L~l~~N~l~~~~p~~~~~~~ 171 (593)
+|+.|++++|++.+.+|..+..++
T Consensus 254 ~L~~L~L~~n~~~~~~p~~~~~l~ 277 (328)
T 4fcg_A 254 PLKRLILKDCSNLLTLPLDIHRLT 277 (328)
T ss_dssp CCCEEECTTCTTCCBCCTTGGGCT
T ss_pred CCCEEECCCCCchhhcchhhhcCC
Confidence 666666666666655555444433
No 265
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.84 E-value=1.4e-20 Score=188.44 Aligned_cols=157 Identities=27% Similarity=0.294 Sum_probs=88.3
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhh
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLL 80 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 80 (593)
|+.|++++|+|+ .+|..++ ++|+.|+|++|+|++..|..|.++++|+.|+|++|.|++..+ .+.+++|++|
T Consensus 12 l~~l~~~~~~l~-~ip~~~~---~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L--- 82 (290)
T 1p9a_G 12 HLEVNCDKRNLT-ALPPDLP---KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV--DGTLPVLGTL--- 82 (290)
T ss_dssp CCEEECTTSCCS-SCCSCCC---TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC--CSCCTTCCEE---
T ss_pred ccEEECCCCCCC-cCCCCCC---CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC--CCCCCcCCEE---
Confidence 355666666666 6665543 366666666666665556666666666666666666663322 2556666666
Q ss_pred cceeeccCCcccccCC----CcccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCCCCccccCCcccccccccc
Q 007680 81 MFGIRLTGNKLYGRIP----PCLVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIPESVGSLISLESLDLSG 156 (593)
Q Consensus 81 ~n~l~l~~n~l~~~~~----~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~l~~ 156 (593)
++++|++. .+| .+..|++|++++|+|++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++
T Consensus 83 ----~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 157 (290)
T 1p9a_G 83 ----DLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLAN 157 (290)
T ss_dssp ----ECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTT
T ss_pred ----ECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCC
Confidence 44444443 222 223355666666666544445555556666666666666544444455555566666666
Q ss_pred ccccCCCCCCCCCCC
Q 007680 157 NNLSGKIPKLEGEIP 171 (593)
Q Consensus 157 N~l~~~~p~~~~~~~ 171 (593)
|++++.++..+..++
T Consensus 158 N~l~~l~~~~~~~l~ 172 (290)
T 1p9a_G 158 NNLTELPAGLLNGLE 172 (290)
T ss_dssp SCCSCCCTTTTTTCT
T ss_pred CcCCccCHHHhcCcC
Confidence 666555544444333
No 266
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.84 E-value=2.5e-21 Score=197.61 Aligned_cols=162 Identities=19% Similarity=0.311 Sum_probs=146.9
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhh
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLL 80 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 80 (593)
++.|+|++|+++ .+|..++. +++|++|+|++|+|+ .+|..|+++++|++|+|++|+++ .+|..|+.+++|++|
T Consensus 83 l~~L~L~~n~l~-~lp~~l~~-l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L--- 155 (328)
T 4fcg_A 83 RVALELRSVPLP-QFPDQAFR-LSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLREL--- 155 (328)
T ss_dssp CCEEEEESSCCS-SCCSCGGG-GTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEE---
T ss_pred eeEEEccCCCch-hcChhhhh-CCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEE---
Confidence 578999999999 99999987 999999999999999 89999999999999999999999 789999999999999
Q ss_pred cceeeccCCcccccCCC-------------cccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCCCCccccCCc
Q 007680 81 MFGIRLTGNKLYGRIPP-------------CLVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIPESVGSLI 147 (593)
Q Consensus 81 ~n~l~l~~n~l~~~~~~-------------~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~~~ 147 (593)
++++|++.+.+|. +..|++|+|++|+++ .+|..++++++|+.|+|++|+++ .+|..+..++
T Consensus 156 ----~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~-~l~~~l~~l~ 229 (328)
T 4fcg_A 156 ----SIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALGPAIHHLP 229 (328)
T ss_dssp ----EEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC-CCCGGGGGCT
T ss_pred ----ECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC-cCchhhccCC
Confidence 7777777766665 557999999999999 78888999999999999999999 5777899999
Q ss_pred cccccccccccccCCCCCCCCCCCCCCC
Q 007680 148 SLESLDLSGNNLSGKIPKLEGEIPVKGS 175 (593)
Q Consensus 148 ~L~~L~l~~N~l~~~~p~~~~~~~~~~~ 175 (593)
+|+.|++++|++.+.+|..+..++.+..
T Consensus 230 ~L~~L~Ls~n~~~~~~p~~~~~l~~L~~ 257 (328)
T 4fcg_A 230 KLEELDLRGCTALRNYPPIFGGRAPLKR 257 (328)
T ss_dssp TCCEEECTTCTTCCBCCCCTTCCCCCCE
T ss_pred CCCEEECcCCcchhhhHHHhcCCCCCCE
Confidence 9999999999999999988776665443
No 267
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.84 E-value=2.8e-20 Score=184.59 Aligned_cols=175 Identities=24% Similarity=0.249 Sum_probs=146.7
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhh
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLL 80 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 80 (593)
|+.|++++|.+. .++. +.. +++|++|+|++|+|++ + +.+..+++|++|+|++|.+++..+..|+.+++|++|
T Consensus 43 L~~L~l~~~~i~-~~~~-l~~-l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L--- 114 (272)
T 3rfs_A 43 IDQIIANNSDIK-SVQG-IQY-LPNVRYLALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKEL--- 114 (272)
T ss_dssp CCEEECTTSCCC-CCTT-GGG-CTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEE---
T ss_pred eeeeeeCCCCcc-cccc-ccc-CCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEE---
Confidence 678999999998 6764 554 9999999999999995 3 478999999999999999998888889999999999
Q ss_pred cceeeccCCcccccC----CCcccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCCCCccccCCcccccccccc
Q 007680 81 MFGIRLTGNKLYGRI----PPCLVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIPESVGSLISLESLDLSG 156 (593)
Q Consensus 81 ~n~l~l~~n~l~~~~----~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~l~~ 156 (593)
++++|++.+.. ..+..|++|++++|++++..+..|+++++|+.|++++|++++..+..+..+++|+.|++++
T Consensus 115 ----~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~ 190 (272)
T 3rfs_A 115 ----VLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQ 190 (272)
T ss_dssp ----ECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred ----ECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCC
Confidence 77788877543 3445699999999999977777789999999999999999987777789999999999999
Q ss_pred ccccCCCCCCCCCCCCCCCccCCCcccccCCccCCCC
Q 007680 157 NNLSGKIPKLEGEIPVKGSFKNFSTESFFGNYALCGP 193 (593)
Q Consensus 157 N~l~~~~p~~~~~~~~~~~~~~~~~~~~~~n~~~c~~ 193 (593)
|++++.+|..+..++. +....+.+|+..|..
T Consensus 191 N~l~~~~~~~~~~l~~------L~~L~l~~N~~~~~~ 221 (272)
T 3rfs_A 191 NQLKSVPDGVFDRLTS------LQYIWLHDNPWDCTC 221 (272)
T ss_dssp SCCSCCCTTTTTTCTT------CCEEECCSSCBCCCT
T ss_pred CcCCccCHHHHhCCcC------CCEEEccCCCccccC
Confidence 9999988876665554 445577888876643
No 268
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.84 E-value=7.2e-21 Score=192.20 Aligned_cols=176 Identities=24% Similarity=0.253 Sum_probs=90.4
Q ss_pred cEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCC-ccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhh
Q 007680 2 RILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIP-NSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLL 80 (593)
Q Consensus 2 ~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 80 (593)
++|+|++|++. .+|..+.. +++|++|+|++|+|++..+ ..|.++++|+.|+|++|.+++..|..|..+++|++|
T Consensus 81 ~~L~Ls~n~i~-~l~~~~~~-l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L--- 155 (306)
T 2z66_A 81 KYLDLSFNGVI-TMSSNFLG-LEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVL--- 155 (306)
T ss_dssp CEEECCSCSEE-EEEEEEET-CTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEE---
T ss_pred CEEECCCCccc-cChhhcCC-CCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEE---
Confidence 44444444444 34444332 4455555555555543322 344455555555555555554444445555555555
Q ss_pred cceeeccCCcccc-----cCCCcccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCCCCccccCCccccccccc
Q 007680 81 MFGIRLTGNKLYG-----RIPPCLVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIPESVGSLISLESLDLS 155 (593)
Q Consensus 81 ~n~l~l~~n~l~~-----~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~l~ 155 (593)
++++|.+.+ .+..+..|++|++++|++++..|..|.++++|+.|++++|++++..+..+..+++|+.|+++
T Consensus 156 ----~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 231 (306)
T 2z66_A 156 ----KMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYS 231 (306)
T ss_dssp ----ECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECT
T ss_pred ----ECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECC
Confidence 444444443 12223346666666666665555566666666666666666665444456666666666666
Q ss_pred cccccCCCCCCCCCCCCCCCccCCCcccccCCccCC
Q 007680 156 GNNLSGKIPKLEGEIPVKGSFKNFSTESFFGNYALC 191 (593)
Q Consensus 156 ~N~l~~~~p~~~~~~~~~~~~~~~~~~~~~~n~~~c 191 (593)
+|++++..|..+..+|. .+......+|+..|
T Consensus 232 ~N~l~~~~~~~~~~~~~-----~L~~L~L~~N~~~~ 262 (306)
T 2z66_A 232 LNHIMTSKKQELQHFPS-----SLAFLNLTQNDFAC 262 (306)
T ss_dssp TSCCCBCSSSSCCCCCT-----TCCEEECTTCCEEC
T ss_pred CCCCcccCHHHHHhhhc-----cCCEEEccCCCeec
Confidence 66666655555444431 23334455555544
No 269
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.83 E-value=1.7e-20 Score=180.08 Aligned_cols=149 Identities=23% Similarity=0.306 Sum_probs=132.0
Q ss_pred cEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhhc
Q 007680 2 RILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLLM 81 (593)
Q Consensus 2 ~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~ 81 (593)
+.+++++|+++ .+|..+. ++|+.|+|++|+|++..+..|.++++|+.|+|++|+|++..|+.|..+++|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~---~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L---- 85 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP---ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSL---- 85 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC---TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEE----
T ss_pred CEEEcCCCCcC-cCCCccC---cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEE----
Confidence 46899999999 8998765 589999999999998777899999999999999999998889999999999999
Q ss_pred ceeeccCCccccc----CCCcccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCCCCccccCCccccccccccc
Q 007680 82 FGIRLTGNKLYGR----IPPCLVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIPESVGSLISLESLDLSGN 157 (593)
Q Consensus 82 n~l~l~~n~l~~~----~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~l~~N 157 (593)
++++|+++.. +..+..|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 86 ---~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 162 (220)
T 2v9t_B 86 ---VLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQN 162 (220)
T ss_dssp ---ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSS
T ss_pred ---ECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCC
Confidence 7778887732 234556999999999999888889999999999999999999877778999999999999999
Q ss_pred cccC
Q 007680 158 NLSG 161 (593)
Q Consensus 158 ~l~~ 161 (593)
++..
T Consensus 163 ~~~c 166 (220)
T 2v9t_B 163 PFIC 166 (220)
T ss_dssp CEEC
T ss_pred CcCC
Confidence 9874
No 270
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.83 E-value=1.3e-20 Score=188.30 Aligned_cols=178 Identities=24% Similarity=0.199 Sum_probs=152.9
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCc-CcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhh
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANN-LTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSL 79 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 79 (593)
|++|+|++|++++..|..+. .+++|++|+|++|. ++...|..|.++++|+.|+|++|.+++..|..|..+++|++|
T Consensus 58 L~~L~l~~n~l~~~~~~~~~-~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L-- 134 (285)
T 1ozn_A 58 LTILWLHSNVLARIDAAAFT-GLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYL-- 134 (285)
T ss_dssp CCEEECCSSCCCEECTTTTT-TCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEE--
T ss_pred CCEEECCCCccceeCHhhcC-CccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEE--
Confidence 68999999999944455565 59999999999997 887778899999999999999999998888899999999999
Q ss_pred hcceeeccCCccccc----CCCcccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCCCCccccCCccccccccc
Q 007680 80 LMFGIRLTGNKLYGR----IPPCLVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIPESVGSLISLESLDLS 155 (593)
Q Consensus 80 ~~n~l~l~~n~l~~~----~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~l~ 155 (593)
++++|++.+. +..+..|++|++++|++++..+..|.++++|+.|++++|++++..|..+..+++|+.|+++
T Consensus 135 -----~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 209 (285)
T 1ozn_A 135 -----YLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLF 209 (285)
T ss_dssp -----ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred -----ECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCC
Confidence 7778887743 3345569999999999997777779999999999999999998889999999999999999
Q ss_pred cccccCCCCCCCCCCCCCCCccCCCcccccCCccCCC
Q 007680 156 GNNLSGKIPKLEGEIPVKGSFKNFSTESFFGNYALCG 192 (593)
Q Consensus 156 ~N~l~~~~p~~~~~~~~~~~~~~~~~~~~~~n~~~c~ 192 (593)
+|++++.++..+..++. +....+.+|+..|.
T Consensus 210 ~n~l~~~~~~~~~~l~~------L~~L~l~~N~~~c~ 240 (285)
T 1ozn_A 210 ANNLSALPTEALAPLRA------LQYLRLNDNPWVCD 240 (285)
T ss_dssp SSCCSCCCHHHHTTCTT------CCEEECCSSCEECS
T ss_pred CCcCCcCCHHHcccCcc------cCEEeccCCCccCC
Confidence 99999977776655543 44567888888764
No 271
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.83 E-value=4e-20 Score=183.47 Aligned_cols=155 Identities=29% Similarity=0.308 Sum_probs=137.8
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhh
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLL 80 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 80 (593)
|++|+|++|+++ .++ .+. .+++|++|+|++|+|++..+..|.++++|+.|+|++|++++..+..|+.+++|++|
T Consensus 65 L~~L~l~~n~l~-~~~-~l~-~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L--- 138 (272)
T 3rfs_A 65 VRYLALGGNKLH-DIS-ALK-ELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYL--- 138 (272)
T ss_dssp CCEEECTTSCCC-CCG-GGT-TCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEE---
T ss_pred CcEEECCCCCCC-Cch-hhc-CCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEE---
Confidence 689999999999 565 555 49999999999999998878889999999999999999998888889999999999
Q ss_pred cceeeccCCcccccC----CCcccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCCCCccccCCcccccccccc
Q 007680 81 MFGIRLTGNKLYGRI----PPCLVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIPESVGSLISLESLDLSG 156 (593)
Q Consensus 81 ~n~l~l~~n~l~~~~----~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~l~~ 156 (593)
++++|++++.. ..+..|++|++++|++++..+..|+.+++|+.|++++|++++..|..+..+++|+.|++++
T Consensus 139 ----~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 214 (272)
T 3rfs_A 139 ----NLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHD 214 (272)
T ss_dssp ----ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCS
T ss_pred ----ECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccC
Confidence 78888887543 3455699999999999987788889999999999999999988888899999999999999
Q ss_pred ccccCCCCC
Q 007680 157 NNLSGKIPK 165 (593)
Q Consensus 157 N~l~~~~p~ 165 (593)
|++++..|.
T Consensus 215 N~~~~~~~~ 223 (272)
T 3rfs_A 215 NPWDCTCPG 223 (272)
T ss_dssp SCBCCCTTT
T ss_pred CCccccCcH
Confidence 999987664
No 272
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.83 E-value=1.6e-20 Score=180.21 Aligned_cols=150 Identities=20% Similarity=0.216 Sum_probs=133.9
Q ss_pred cEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCC-ccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhh
Q 007680 2 RILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIP-NSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLL 80 (593)
Q Consensus 2 ~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 80 (593)
+.+++++|+++ .+|..++ +.+++|+|++|+|++..| ..|.++++|+.|+|++|+|++..+..|..+++|++|
T Consensus 14 ~~l~~s~n~l~-~iP~~~~---~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L--- 86 (220)
T 2v70_A 14 TTVDCSNQKLN-KIPEHIP---QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEI--- 86 (220)
T ss_dssp TEEECCSSCCS-SCCSCCC---TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEE---
T ss_pred CEeEeCCCCcc-cCccCCC---CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEE---
Confidence 57999999999 8998765 367999999999997755 458999999999999999998888899999999999
Q ss_pred cceeeccCCccccc----CCCcccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCCCCccccCCcccccccccc
Q 007680 81 MFGIRLTGNKLYGR----IPPCLVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIPESVGSLISLESLDLSG 156 (593)
Q Consensus 81 ~n~l~l~~n~l~~~----~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~l~~ 156 (593)
++++|++++. +..+..|++|+|++|+|++..|..|.++++|+.|+|++|+|++..|..|..+++|+.|++++
T Consensus 87 ----~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 162 (220)
T 2v70_A 87 ----LLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLA 162 (220)
T ss_dssp ----ECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred ----ECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecC
Confidence 8888888754 34456799999999999988899999999999999999999988899999999999999999
Q ss_pred ccccCC
Q 007680 157 NNLSGK 162 (593)
Q Consensus 157 N~l~~~ 162 (593)
|+++..
T Consensus 163 N~l~c~ 168 (220)
T 2v70_A 163 NPFNCN 168 (220)
T ss_dssp CCEECS
T ss_pred cCCcCC
Confidence 999864
No 273
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.83 E-value=4.6e-20 Score=182.84 Aligned_cols=155 Identities=28% Similarity=0.291 Sum_probs=138.6
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhh
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLL 80 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 80 (593)
|++|+|++|+++ .+|..++..+++|++|+|++|+|++..+..|.++++|+.|+|++|++++..|..|..+++|++|
T Consensus 63 L~~L~l~~n~l~-~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L--- 138 (270)
T 2o6q_A 63 LRLLYLNDNKLQ-TLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYL--- 138 (270)
T ss_dssp CCEEECCSSCCS-CCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEE---
T ss_pred CCEEECCCCccC-eeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEE---
Confidence 789999999999 8998887779999999999999997777789999999999999999998888889999999999
Q ss_pred cceeeccCCccccc----CCCcccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCCCCccccCCcccccccccc
Q 007680 81 MFGIRLTGNKLYGR----IPPCLVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIPESVGSLISLESLDLSG 156 (593)
Q Consensus 81 ~n~l~l~~n~l~~~----~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~l~~ 156 (593)
++++|++.+. +..+..|++|+|++|++++..+..|.++++|+.|+|++|+|++..+..+..+++|+.|++++
T Consensus 139 ----~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 214 (270)
T 2o6q_A 139 ----SLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQE 214 (270)
T ss_dssp ----ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCS
T ss_pred ----ECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecC
Confidence 7788887743 34456799999999999987777899999999999999999977777799999999999999
Q ss_pred ccccCCC
Q 007680 157 NNLSGKI 163 (593)
Q Consensus 157 N~l~~~~ 163 (593)
|++...-
T Consensus 215 N~~~c~c 221 (270)
T 2o6q_A 215 NPWDCTC 221 (270)
T ss_dssp SCBCCSS
T ss_pred CCeeCCC
Confidence 9997643
No 274
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.82 E-value=5.1e-20 Score=175.04 Aligned_cols=153 Identities=24% Similarity=0.230 Sum_probs=116.4
Q ss_pred cEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhhc
Q 007680 2 RILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLLM 81 (593)
Q Consensus 2 ~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~ 81 (593)
+.+++++++++ .+|..+. ++|++|+|++|+|++..+..|.++++|+.|+|++|++++..+..|..+++|++|
T Consensus 10 ~~v~c~~~~l~-~~p~~~~---~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L---- 81 (208)
T 2o6s_A 10 TTVECYSQGRT-SVPTGIP---AQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYL---- 81 (208)
T ss_dssp TEEECCSSCCS-SCCSCCC---TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEE----
T ss_pred CEEEecCCCcc-CCCCCCC---CCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEE----
Confidence 45778888887 7886653 478888888888886666667888888888888888886666667888888888
Q ss_pred ceeeccCCccccc----CCCcccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCCCCccccCCccccccccccc
Q 007680 82 FGIRLTGNKLYGR----IPPCLVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIPESVGSLISLESLDLSGN 157 (593)
Q Consensus 82 n~l~l~~n~l~~~----~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~l~~N 157 (593)
++++|++++. +..+..|++|++++|++++..+..|..+++|+.|++++|++++..+..+..+++|+.|++++|
T Consensus 82 ---~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 158 (208)
T 2o6s_A 82 ---NLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDN 158 (208)
T ss_dssp ---ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSC
T ss_pred ---ECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCC
Confidence 6677776633 233446888888888888666666788888888888888888666666788888888888888
Q ss_pred cccCCCCC
Q 007680 158 NLSGKIPK 165 (593)
Q Consensus 158 ~l~~~~p~ 165 (593)
++.+..|.
T Consensus 159 ~~~~~~~~ 166 (208)
T 2o6s_A 159 PWDCTCPG 166 (208)
T ss_dssp CBCCCTTT
T ss_pred CeecCCCC
Confidence 88775553
No 275
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.82 E-value=1.9e-20 Score=182.06 Aligned_cols=163 Identities=19% Similarity=0.212 Sum_probs=132.3
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCc-CcccCCccCCCCCCCcEEEccC-CcccccccccccCCCCchhhh
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANN-LTGTIPNSITNATKLIVLDLGF-NSFSGHILNTFGNLRHLSVLS 78 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~ 78 (593)
|+.|+|++|+++ .+|...+..+++|++|+|++|+ |++..+.+|.++++|+.|+|++ |++++..+..|..+++|++|
T Consensus 33 l~~L~l~~n~l~-~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L- 110 (239)
T 2xwt_C 33 TQTLKLIETHLR-TIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL- 110 (239)
T ss_dssp CCEEEEESCCCS-EECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE-
T ss_pred ccEEEEeCCcce-EECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE-
Confidence 689999999999 7887655569999999999997 9977777899999999999999 99997777889999999999
Q ss_pred hhcceeeccCCcccccCC---Cccccc---EEEccCC-cccCcCCCCCCCCCCCC-EecCCCccCCCCCCccccCCcccc
Q 007680 79 LLMFGIRLTGNKLYGRIP---PCLVLT---VLDVSRN-QLSGDIPSTIGGRVDLE-TLSLASNQFQGPIPESVGSLISLE 150 (593)
Q Consensus 79 l~~n~l~l~~n~l~~~~~---~~~~L~---~L~l~~N-~l~~~~p~~~~~l~~L~-~L~l~~N~l~~~~p~~l~~~~~L~ 150 (593)
++++|++.+ +| .+..|+ +|++++| ++++..+..|.++++|+ .|++++|+++ .+|......++|+
T Consensus 111 ------~l~~n~l~~-lp~~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~ 182 (239)
T 2xwt_C 111 ------GIFNTGLKM-FPDLTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLD 182 (239)
T ss_dssp ------EEEEECCCS-CCCCTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCEEE
T ss_pred ------eCCCCCCcc-ccccccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCCCC
Confidence 666666653 33 333466 9999999 88876677788899999 9999999998 5555444448899
Q ss_pred cccccccc-ccCCCCCCCCCC-CCC
Q 007680 151 SLDLSGNN-LSGKIPKLEGEI-PVK 173 (593)
Q Consensus 151 ~L~l~~N~-l~~~~p~~~~~~-~~~ 173 (593)
.|++++|+ ++++.+..+..+ +.+
T Consensus 183 ~L~L~~n~~l~~i~~~~~~~l~~~L 207 (239)
T 2xwt_C 183 AVYLNKNKYLTVIDKDAFGGVYSGP 207 (239)
T ss_dssp EEECTTCTTCCEECTTTTTTCSBCC
T ss_pred EEEcCCCCCcccCCHHHhhccccCC
Confidence 99999995 888777777665 443
No 276
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.82 E-value=7.4e-20 Score=186.88 Aligned_cols=155 Identities=24% Similarity=0.321 Sum_probs=81.4
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhh
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLL 80 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 80 (593)
|++|+|++|++++..|..+. .+++|++|+|++|+|+ .+|..+. ++|+.|+|++|++++..+..|..+++|+.|+|+
T Consensus 78 L~~L~L~~n~l~~~~~~~~~-~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 153 (330)
T 1xku_A 78 LHTLILINNKISKISPGAFA-PLVKLERLYLSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELG 153 (330)
T ss_dssp CCEEECCSSCCCCBCTTTTT-TCTTCCEEECCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECC
T ss_pred CCEEECCCCcCCeeCHHHhc-CCCCCCEEECCCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECC
Confidence 56778888888733355554 3777777777777777 4554433 455555555555554444444444444444443
Q ss_pred ccee-------------------eccCCcccccCCCc--ccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCCC
Q 007680 81 MFGI-------------------RLTGNKLYGRIPPC--LVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPI 139 (593)
Q Consensus 81 ~n~l-------------------~l~~n~l~~~~~~~--~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 139 (593)
+|.+ ++++|.+.. +|.. ..|++|++++|++++..|..|.++++|+.|++++|++++..
T Consensus 154 ~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~-l~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 232 (330)
T 1xku_A 154 TNPLKSSGIENGAFQGMKKLSYIRIADTNITT-IPQGLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVD 232 (330)
T ss_dssp SSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS-CCSSCCTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEEC
T ss_pred CCcCCccCcChhhccCCCCcCEEECCCCcccc-CCccccccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeC
Confidence 3321 233443331 2211 12555555555555444445555555555555555555444
Q ss_pred CccccCCcccccccccccccc
Q 007680 140 PESVGSLISLESLDLSGNNLS 160 (593)
Q Consensus 140 p~~l~~~~~L~~L~l~~N~l~ 160 (593)
+..+..+++|+.|++++|+++
T Consensus 233 ~~~~~~l~~L~~L~L~~N~l~ 253 (330)
T 1xku_A 233 NGSLANTPHLRELHLNNNKLV 253 (330)
T ss_dssp TTTGGGSTTCCEEECCSSCCS
T ss_pred hhhccCCCCCCEEECCCCcCc
Confidence 444555555555555555555
No 277
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.82 E-value=3.7e-20 Score=198.99 Aligned_cols=80 Identities=24% Similarity=0.292 Sum_probs=42.3
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhh
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLL 80 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 80 (593)
|++|+|++|+++ .+|...+..+++|++|+|++|+|++..|..|.++++|+.|+|++|.+++..|..|..+++|++|+|+
T Consensus 82 L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 160 (477)
T 2id5_A 82 LRTLGLRSNRLK-LIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLE 160 (477)
T ss_dssp CCEEECCSSCCC-SCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEE
T ss_pred CCEEECCCCcCC-ccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECC
Confidence 455555555555 4554443345555555555555555555555555555555555555554444455555555555444
Q ss_pred c
Q 007680 81 M 81 (593)
Q Consensus 81 ~ 81 (593)
+
T Consensus 161 ~ 161 (477)
T 2id5_A 161 K 161 (477)
T ss_dssp S
T ss_pred C
Confidence 3
No 278
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.82 E-value=1.9e-20 Score=193.81 Aligned_cols=176 Identities=24% Similarity=0.187 Sum_probs=145.6
Q ss_pred cEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCC-CCCCCcEEEccCCcccccccccccCCCCchhhhhh
Q 007680 2 RILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSIT-NATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLL 80 (593)
Q Consensus 2 ~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 80 (593)
+++++++|+|+ .+|..++ +.++.|+|++|+|++..+..|. ++++|+.|+|++|+|++..|+.|..+++|++|
T Consensus 21 ~~l~c~~~~l~-~iP~~~~---~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L--- 93 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP---SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYL--- 93 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC---TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEE---
T ss_pred CEEEeCCCCcC-ccCccCC---CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEE---
Confidence 57899999999 8998765 4799999999999987778887 99999999999999998888899999999999
Q ss_pred cceeeccCCccccc----CCCcccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCCCCccc---cCCccccccc
Q 007680 81 MFGIRLTGNKLYGR----IPPCLVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIPESV---GSLISLESLD 153 (593)
Q Consensus 81 ~n~l~l~~n~l~~~----~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l---~~~~~L~~L~ 153 (593)
+|++|+|.+. +..+..|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+..| ..+++|+.|+
T Consensus 94 ----~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~ 169 (361)
T 2xot_A 94 ----DLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLD 169 (361)
T ss_dssp ----ECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEE
T ss_pred ----ECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEE
Confidence 8888888743 4455679999999999998889999999999999999999995444444 5789999999
Q ss_pred cccccccCCCCCCCCCCCCCCCccCCCcccccCCccCCC
Q 007680 154 LSGNNLSGKIPKLEGEIPVKGSFKNFSTESFFGNYALCG 192 (593)
Q Consensus 154 l~~N~l~~~~p~~~~~~~~~~~~~~~~~~~~~~n~~~c~ 192 (593)
|++|+|+++++..+..++.. .+....+.+|++.|.
T Consensus 170 L~~N~l~~l~~~~~~~l~~~----~l~~l~l~~N~~~C~ 204 (361)
T 2xot_A 170 LSSNKLKKLPLTDLQKLPAW----VKNGLYLHNNPLECD 204 (361)
T ss_dssp CCSSCCCCCCHHHHHHSCHH----HHTTEECCSSCEECC
T ss_pred CCCCCCCccCHHHhhhccHh----hcceEEecCCCccCC
Confidence 99999998776655554421 013457788888773
No 279
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.82 E-value=2.8e-20 Score=184.99 Aligned_cols=158 Identities=26% Similarity=0.243 Sum_probs=123.0
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhh
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLL 80 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 80 (593)
|++|+|++|+++ .+|...+..+++|++|+|++|+|++..+..|.++++|+.|+|++|++++..|+.|..+++|++|
T Consensus 30 l~~L~ls~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L--- 105 (276)
T 2z62_A 30 TKNLDLSFNPLR-HLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKL--- 105 (276)
T ss_dssp CCEEECTTCCCC-EECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEE---
T ss_pred ccEEECCCCccc-ccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEE---
Confidence 678999999999 6666444459999999999999997777789999999999999999998888889999999999
Q ss_pred cceeeccCCccccc----CCCcccccEEEccCCcccCc-CCCCCCCCCCCCEecCCCccCCCCCCccccCCcccc----c
Q 007680 81 MFGIRLTGNKLYGR----IPPCLVLTVLDVSRNQLSGD-IPSTIGGRVDLETLSLASNQFQGPIPESVGSLISLE----S 151 (593)
Q Consensus 81 ~n~l~l~~n~l~~~----~~~~~~L~~L~l~~N~l~~~-~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~----~ 151 (593)
++++|++.+. +..+..|++|++++|++++. +|..|.++++|+.|++++|++++..+..+..+.+|+ .
T Consensus 106 ----~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~ 181 (276)
T 2z62_A 106 ----VAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLS 181 (276)
T ss_dssp ----ECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEE
T ss_pred ----ECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhcccccee
Confidence 6667766632 33455688888888888753 577788888888888888888866666666655555 5
Q ss_pred cccccccccCCCCCC
Q 007680 152 LDLSGNNLSGKIPKL 166 (593)
Q Consensus 152 L~l~~N~l~~~~p~~ 166 (593)
|++++|++++..+..
T Consensus 182 L~ls~n~l~~~~~~~ 196 (276)
T 2z62_A 182 LDLSLNPMNFIQPGA 196 (276)
T ss_dssp EECCSSCCCEECTTS
T ss_pred eecCCCcccccCccc
Confidence 566666666555443
No 280
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.81 E-value=1e-19 Score=185.95 Aligned_cols=180 Identities=22% Similarity=0.245 Sum_probs=116.1
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCccc-------------------
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFS------------------- 61 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~------------------- 61 (593)
|+.|+|++|+++ .++...+..+++|++|+|++|+|++..|.+|.++++|+.|+|++|+++
T Consensus 56 l~~L~l~~n~i~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~L~~L~l~~n~ 134 (332)
T 2ft3_A 56 TTLLDLQNNDIS-ELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLPSSLVELRIHDNR 134 (332)
T ss_dssp CCEEECCSSCCC-EECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCCSCCSSCCTTCCEEECCSSC
T ss_pred CeEEECCCCcCC-ccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCCccCccccccCCEEECCCCc
Confidence 455666666666 343322233666666666666666555566666666666666555554
Q ss_pred --ccccccccCCCCchhhhhhccee------------------eccCCcccccCCCc--ccccEEEccCCcccCcCCCCC
Q 007680 62 --GHILNTFGNLRHLSVLSLLMFGI------------------RLTGNKLYGRIPPC--LVLTVLDVSRNQLSGDIPSTI 119 (593)
Q Consensus 62 --~~~p~~~~~l~~L~~L~l~~n~l------------------~l~~n~l~~~~~~~--~~L~~L~l~~N~l~~~~p~~~ 119 (593)
+..+..|..+++|+.|++++|.+ ++++|++++ +|.. ..|++|++++|++++..+..|
T Consensus 135 i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~L~~L~l~~n~l~~-l~~~~~~~L~~L~l~~n~i~~~~~~~l 213 (332)
T 2ft3_A 135 IRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTG-IPKDLPETLNELHLDHNKIQAIELEDL 213 (332)
T ss_dssp CCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSCCCSCCBCCSSBCSS-CCSSSCSSCSCCBCCSSCCCCCCTTSS
T ss_pred cCccCHhHhCCCccCCEEECCCCccccCCCCcccccCCccCEEECcCCCCCc-cCccccCCCCEEECCCCcCCccCHHHh
Confidence 33334577777788776665543 344555542 3322 248888888888887777788
Q ss_pred CCCCCCCEecCCCccCCCCCCccccCCccccccccccccccCCCCCCCCCCCCCCCccCCCcccccCCcc
Q 007680 120 GGRVDLETLSLASNQFQGPIPESVGSLISLESLDLSGNNLSGKIPKLEGEIPVKGSFKNFSTESFFGNYA 189 (593)
Q Consensus 120 ~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~~~~~~~~n~~ 189 (593)
.++++|+.|++++|++++..|..+..+++|+.|++++|+++. +|..+..++. +....+.+|..
T Consensus 214 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~-lp~~l~~l~~------L~~L~l~~N~l 276 (332)
T 2ft3_A 214 LRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLSR-VPAGLPDLKL------LQVVYLHTNNI 276 (332)
T ss_dssp TTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCCB-CCTTGGGCTT------CCEEECCSSCC
T ss_pred cCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCee-cChhhhcCcc------CCEEECCCCCC
Confidence 888899999999999987777788888899999999998884 4544444443 33344555543
No 281
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.81 E-value=1.1e-19 Score=175.35 Aligned_cols=151 Identities=25% Similarity=0.291 Sum_probs=132.7
Q ss_pred cEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhhc
Q 007680 2 RILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLLM 81 (593)
Q Consensus 2 ~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~ 81 (593)
+.+++++++++ .+|.++. ++|++|+|++|+|++..|..|.++++|+.|+|++|+|+...+..|..+++|+.|
T Consensus 22 ~~v~c~~~~l~-~ip~~~~---~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L---- 93 (229)
T 3e6j_A 22 TTVDCRSKRHA-SVPAGIP---TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVL---- 93 (229)
T ss_dssp TEEECTTSCCS-SCCSCCC---TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE----
T ss_pred CEeEccCCCcC-ccCCCCC---CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEE----
Confidence 57899999998 8998764 699999999999998889999999999999999999997777788999999999
Q ss_pred ceeeccCCccccc----CCCcccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCCCCccccCCccccccccccc
Q 007680 82 FGIRLTGNKLYGR----IPPCLVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIPESVGSLISLESLDLSGN 157 (593)
Q Consensus 82 n~l~l~~n~l~~~----~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~l~~N 157 (593)
++++|++++. +..+..|++|+|++|+|+ .+|..+..+++|+.|+|++|+|++..+..|..+++|+.|++++|
T Consensus 94 ---~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N 169 (229)
T 3e6j_A 94 ---DLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGN 169 (229)
T ss_dssp ---ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTS
T ss_pred ---ECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCC
Confidence 7788887743 334556999999999999 78888999999999999999999776778999999999999999
Q ss_pred cccCCCC
Q 007680 158 NLSGKIP 164 (593)
Q Consensus 158 ~l~~~~p 164 (593)
+++...+
T Consensus 170 ~~~c~c~ 176 (229)
T 3e6j_A 170 PWDCECR 176 (229)
T ss_dssp CBCTTBG
T ss_pred CccCCcc
Confidence 9987543
No 282
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.81 E-value=9.4e-20 Score=194.49 Aligned_cols=172 Identities=26% Similarity=0.287 Sum_probs=124.8
Q ss_pred CcEEEeeCccccccCChh-hhhCCCCCcEEECCCCcCcccCCcc-CCCCCCCcEEEccCCcccccccccccCC-------
Q 007680 1 MRILTLEGNQLSGRLPST-IGHSLPNIEYLLLTANNLTGTIPNS-ITNATKLIVLDLGFNSFSGHILNTFGNL------- 71 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~-~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~~p~~~~~l------- 71 (593)
|++|+|++|++++.+|.. .+..+++|++|+|++|+|++..|.. |.++++|+.|+|++|++++..|..+..+
T Consensus 105 L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~ 184 (455)
T 3v47_A 105 LEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTL 184 (455)
T ss_dssp CCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEE
T ss_pred CCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhccccccccc
Confidence 577888888887544443 2234778888888888887666665 6778888888888888777666655443
Q ss_pred ---------------------------CCchhhhhhcce-----------------------------------------
Q 007680 72 ---------------------------RHLSVLSLLMFG----------------------------------------- 83 (593)
Q Consensus 72 ---------------------------~~L~~L~l~~n~----------------------------------------- 83 (593)
++|++|+|++|.
T Consensus 185 L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~ 264 (455)
T 3v47_A 185 LRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDP 264 (455)
T ss_dssp EECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCC
T ss_pred cccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccC
Confidence 556666666552
Q ss_pred ---------------eeccCCcccccCC----CcccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCCCCcccc
Q 007680 84 ---------------IRLTGNKLYGRIP----PCLVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIPESVG 144 (593)
Q Consensus 84 ---------------l~l~~n~l~~~~~----~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~ 144 (593)
+++++|++.+.+| .+..|++|++++|++++..|..|.++++|+.|+|++|++++..|..+.
T Consensus 265 ~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 344 (455)
T 3v47_A 265 DNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFE 344 (455)
T ss_dssp CTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGT
T ss_pred cccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhc
Confidence 4677888775443 344588888888888877777888888888888888888876777788
Q ss_pred CCccccccccccccccCCCCCCCCCCCC
Q 007680 145 SLISLESLDLSGNNLSGKIPKLEGEIPV 172 (593)
Q Consensus 145 ~~~~L~~L~l~~N~l~~~~p~~~~~~~~ 172 (593)
++++|+.|++++|++++..|..+..++.
T Consensus 345 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 372 (455)
T 3v47_A 345 NLDKLEVLDLSYNHIRALGDQSFLGLPN 372 (455)
T ss_dssp TCTTCCEEECCSSCCCEECTTTTTTCTT
T ss_pred CcccCCEEECCCCcccccChhhcccccc
Confidence 8888888888888888877776655554
No 283
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.81 E-value=1.3e-19 Score=181.40 Aligned_cols=174 Identities=24% Similarity=0.179 Sum_probs=144.8
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhh
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLL 80 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 80 (593)
|+.|+|++|+++ .++...+..+++|++|+|++|+|++. +.. ..+++|+.|+|++|+|+ .+|..+..+++|++|
T Consensus 33 l~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~-~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L--- 105 (290)
T 1p9a_G 33 TTILHLSENLLY-TFSLATLMPYTRLTQLNLDRAELTKL-QVD-GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVL--- 105 (290)
T ss_dssp CCEEECTTSCCS-EEEGGGGTTCTTCCEEECTTSCCCEE-ECC-SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEE---
T ss_pred CCEEEcCCCcCC-ccCHHHhhcCCCCCEEECCCCccCcc-cCC-CCCCcCCEEECCCCcCC-cCchhhccCCCCCEE---
Confidence 679999999999 55544444699999999999999954 433 79999999999999999 788889999999999
Q ss_pred cceeeccCCccccc----CCCcccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCCCCccccCCcccccccccc
Q 007680 81 MFGIRLTGNKLYGR----IPPCLVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIPESVGSLISLESLDLSG 156 (593)
Q Consensus 81 ~n~l~l~~n~l~~~----~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~l~~ 156 (593)
++++|++++. +..+..|++|+|++|+|++.++..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++
T Consensus 106 ----~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~ 181 (290)
T 1p9a_G 106 ----DVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQE 181 (290)
T ss_dssp ----ECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCS
T ss_pred ----ECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCC
Confidence 8888888743 44556799999999999987778889999999999999999976666788999999999999
Q ss_pred ccccCCCCCCCCCCCCCCCccCCCcccccCCccCCC
Q 007680 157 NNLSGKIPKLEGEIPVKGSFKNFSTESFFGNYALCG 192 (593)
Q Consensus 157 N~l~~~~p~~~~~~~~~~~~~~~~~~~~~~n~~~c~ 192 (593)
|+++.+++..+ ..+ .+....+.+||+.|.
T Consensus 182 N~l~~ip~~~~-~~~------~L~~l~L~~Np~~C~ 210 (290)
T 1p9a_G 182 NSLYTIPKGFF-GSH------LLPFAFLHGNPWLCN 210 (290)
T ss_dssp SCCCCCCTTTT-TTC------CCSEEECCSCCBCCS
T ss_pred CcCCccChhhc-ccc------cCCeEEeCCCCccCc
Confidence 99996554433 222 455667889999873
No 284
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.81 E-value=1.1e-19 Score=193.90 Aligned_cols=165 Identities=25% Similarity=0.318 Sum_probs=114.2
Q ss_pred cEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhhc
Q 007680 2 RILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLLM 81 (593)
Q Consensus 2 ~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~ 81 (593)
..+++++++++ .+|.++. ++|++|+|++|+|++..|+.|.++++|+.|+|++|+|++..|..|.++++|++|+|++
T Consensus 57 ~~v~c~~~~l~-~iP~~~~---~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~ 132 (452)
T 3zyi_A 57 SKVVCTRRGLS-EVPQGIP---SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFD 132 (452)
T ss_dssp CEEECCSSCCS-SCCSCCC---TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred cEEEECCCCcC-ccCCCCC---CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCC
Confidence 46889999999 8998765 5999999999999988899999999999999999999988889999999999996654
Q ss_pred ce-----------------eeccCCccccc----CCCcccccEEEccC-CcccCcCCCCCCCCCCCCEecCCCccCCCCC
Q 007680 82 FG-----------------IRLTGNKLYGR----IPPCLVLTVLDVSR-NQLSGDIPSTIGGRVDLETLSLASNQFQGPI 139 (593)
Q Consensus 82 n~-----------------l~l~~n~l~~~----~~~~~~L~~L~l~~-N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 139 (593)
|. +++++|++... +..+..|++|++++ |.+....+..|.++++|+.|+|++|+|++ +
T Consensus 133 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~ 211 (452)
T 3zyi_A 133 NWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-M 211 (452)
T ss_dssp SCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-C
T ss_pred CcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc-c
Confidence 43 33444444311 11122233333333 12221122245666777777777777763 4
Q ss_pred CccccCCccccccccccccccCCCCCCCCCCCC
Q 007680 140 PESVGSLISLESLDLSGNNLSGKIPKLEGEIPV 172 (593)
Q Consensus 140 p~~l~~~~~L~~L~l~~N~l~~~~p~~~~~~~~ 172 (593)
| .+..+++|+.|+|++|++++..|..+..++.
T Consensus 212 ~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 243 (452)
T 3zyi_A 212 P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSS 243 (452)
T ss_dssp C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTT
T ss_pred c-cccccccccEEECcCCcCcccCcccccCccC
Confidence 4 3566667777777777777666665555443
No 285
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.80 E-value=3.9e-20 Score=212.54 Aligned_cols=190 Identities=24% Similarity=0.248 Sum_probs=132.6
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhh
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLL 80 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 80 (593)
|+.|+|++|++++..|..+ .++++|++|+|++|+|++..|..|.++++|+.|+|++|.+++..+..|..+++|+.|+|+
T Consensus 292 L~~L~L~~n~i~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls 370 (844)
T 3j0a_A 292 LKVLNLAYNKINKIADEAF-YGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLR 370 (844)
T ss_dssp CCEEEEESCCCCEECTTTT-TTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEE
T ss_pred CCEEECCCCcCCCCChHHh-cCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECC
Confidence 6788888888884444444 458899999999999987778888899999999999999987777788888889888887
Q ss_pred ccee------------eccCCccc--------------------cc-----CCCcccccEEEccCCcccC----------
Q 007680 81 MFGI------------RLTGNKLY--------------------GR-----IPPCLVLTVLDVSRNQLSG---------- 113 (593)
Q Consensus 81 ~n~l------------~l~~n~l~--------------------~~-----~~~~~~L~~L~l~~N~l~~---------- 113 (593)
+|.+ ++++|++. +. +..+..|++|+|++|++++
T Consensus 371 ~N~l~~i~~~~~L~~L~l~~N~l~~l~~~~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~ 450 (844)
T 3j0a_A 371 DNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSEN 450 (844)
T ss_dssp TCCSCCCSSCCSCSEEEEESCCCCCCCCCCTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSC
T ss_pred CCCCCcccCCCCcchhccCCCCcccccccccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccC
Confidence 6652 23333332 10 0022234455555544442
Q ss_pred --------------------cCCCCCCCCCCCCEecCCCccCCCCCCccccCCccccccccccccccCCCCCCCC-CC--
Q 007680 114 --------------------DIPSTIGGRVDLETLSLASNQFQGPIPESVGSLISLESLDLSGNNLSGKIPKLEG-EI-- 170 (593)
Q Consensus 114 --------------------~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~l~~N~l~~~~p~~~~-~~-- 170 (593)
..+..|.++++|+.|+|++|+|++.+|..|.++++|+.|+|++|++++.+|..+. .+
T Consensus 451 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~~L~~ 530 (844)
T 3j0a_A 451 PSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLPANLEI 530 (844)
T ss_dssp TTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCCSCCCE
T ss_pred CccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhhccccE
Confidence 2234567788888888888888887888888888888888888888887766442 00
Q ss_pred ----------CCCCCccCCCcccccCCccCC
Q 007680 171 ----------PVKGSFKNFSTESFFGNYALC 191 (593)
Q Consensus 171 ----------~~~~~~~~~~~~~~~~n~~~c 191 (593)
+....+..+....+.+||+.|
T Consensus 531 L~Ls~N~l~~~~~~~~~~L~~l~l~~Np~~C 561 (844)
T 3j0a_A 531 LDISRNQLLAPNPDVFVSLSVLDITHNKFIC 561 (844)
T ss_dssp EEEEEECCCCCCSCCCSSCCEEEEEEECCCC
T ss_pred EECCCCcCCCCChhHhCCcCEEEecCCCccc
Confidence 001234455667788888887
No 286
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.80 E-value=1.5e-19 Score=192.26 Aligned_cols=168 Identities=21% Similarity=0.208 Sum_probs=110.6
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhh
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLL 80 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 80 (593)
|+.|+|++|+|+ .++...+..+++|++|+|++|+|++..+.+|.++++|+.|+|++|+|+...++.|..+++|++|+|+
T Consensus 66 l~~L~L~~n~i~-~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 144 (440)
T 3zyj_A 66 TRLLNLHENQIQ-IIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLR 144 (440)
T ss_dssp CSEEECCSCCCC-EECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECC
T ss_pred CcEEEccCCcCC-eeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCC
Confidence 578999999999 5665555569999999999999998888899999999999999999997777789999999999555
Q ss_pred ccee-----------------eccCCcccc-----cCCCcccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCC
Q 007680 81 MFGI-----------------RLTGNKLYG-----RIPPCLVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGP 138 (593)
Q Consensus 81 ~n~l-----------------~l~~n~l~~-----~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 138 (593)
+|.+ ++++|+..+ .+..+.+|++|+|++|+++ .+| .+..+++|+.|+|++|+|++.
T Consensus 145 ~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~ 222 (440)
T 3zyj_A 145 NNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAI 222 (440)
T ss_dssp SCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEE
T ss_pred CCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCcc
Confidence 4432 122211111 1222333555555555554 333 244555555555555555544
Q ss_pred CCccccCCccccccccccccccCCCCCCCCCCC
Q 007680 139 IPESVGSLISLESLDLSGNNLSGKIPKLEGEIP 171 (593)
Q Consensus 139 ~p~~l~~~~~L~~L~l~~N~l~~~~p~~~~~~~ 171 (593)
.|..|.++++|+.|++++|++++..+..+..++
T Consensus 223 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 255 (440)
T 3zyj_A 223 RPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQ 255 (440)
T ss_dssp CTTTTTTCTTCCEEECTTCCCCEECTTSSTTCT
T ss_pred ChhhhccCccCCEEECCCCceeEEChhhhcCCC
Confidence 455555555555555555555555554444333
No 287
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.80 E-value=4.1e-19 Score=168.74 Aligned_cols=157 Identities=24% Similarity=0.240 Sum_probs=136.3
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhh
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLL 80 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 80 (593)
|+.|+|++|+++ .+|...+..+++|++|+|++|+|++..+..|.++++|++|+|++|++++..+..|..+++|++|
T Consensus 30 l~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L--- 105 (208)
T 2o6s_A 30 TTYLDLETNSLK-SLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKEL--- 105 (208)
T ss_dssp CSEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE---
T ss_pred CcEEEcCCCccC-cCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEE---
Confidence 689999999999 7887766669999999999999997767778999999999999999997777779999999999
Q ss_pred cceeeccCCcccccC----CCcccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCCCCccccCCcccccccccc
Q 007680 81 MFGIRLTGNKLYGRI----PPCLVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIPESVGSLISLESLDLSG 156 (593)
Q Consensus 81 ~n~l~l~~n~l~~~~----~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~l~~ 156 (593)
++++|++.+.. ..+..|++|++++|++++..+..|..+++|+.|++++|++.+ .+++|+.|+++.
T Consensus 106 ----~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~L~~~~ 174 (208)
T 2o6s_A 106 ----ALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWI 174 (208)
T ss_dssp ----ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC-------CTTTTHHHHHHH
T ss_pred ----EcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec-------CCCCHHHHHHHH
Confidence 77888887433 345569999999999997777778999999999999999874 456899999999
Q ss_pred ccccCCCCCCCCCCCC
Q 007680 157 NNLSGKIPKLEGEIPV 172 (593)
Q Consensus 157 N~l~~~~p~~~~~~~~ 172 (593)
|+++|.+|..+..++.
T Consensus 175 n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 175 NKHSGVVRNSAGSVAP 190 (208)
T ss_dssp HHCTTTBBCTTSSBCT
T ss_pred HhCCceeeccCccccC
Confidence 9999999987766553
No 288
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.80 E-value=1e-19 Score=201.56 Aligned_cols=178 Identities=21% Similarity=0.202 Sum_probs=106.9
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCC-ccCCCCCCCcEEEccCCcccccccccccCCCCchhhhh
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIP-NSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSL 79 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 79 (593)
|+.|+|++|.+. .+|..+.. +++|+.|+|++|++++..| ..|.++++|+.|+|++|.+++..|..|+.+++|++|
T Consensus 378 L~~L~L~~n~l~-~~~~~~~~-l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L-- 453 (606)
T 3vq2_A 378 LRHLDLSFNGAI-IMSANFMG-LEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTL-- 453 (606)
T ss_dssp CCEEECCSCSEE-EECCCCTT-CTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEE--
T ss_pred ccEeECCCCccc-cchhhccC-CCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEE--
Confidence 344555555554 34433332 5555555555555554444 345555555555555555555555555555555555
Q ss_pred hcceeeccCCccccc-----CCCcccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCCCCccccCCcccccccc
Q 007680 80 LMFGIRLTGNKLYGR-----IPPCLVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIPESVGSLISLESLDL 154 (593)
Q Consensus 80 ~~n~l~l~~n~l~~~-----~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~l 154 (593)
++++|++.+. +..+..|++|++++|++++.+|..|.++++|+.|++++|++++..|..+.++++|+.|++
T Consensus 454 -----~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l 528 (606)
T 3vq2_A 454 -----KMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDC 528 (606)
T ss_dssp -----ECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEEC
T ss_pred -----ECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEEC
Confidence 5666666542 233445777777777777766777777777777777777777666777777777777777
Q ss_pred ccccccCCCCCCCCCCCCCCCccCCCcccccCCccCCCC
Q 007680 155 SGNNLSGKIPKLEGEIPVKGSFKNFSTESFFGNYALCGP 193 (593)
Q Consensus 155 ~~N~l~~~~p~~~~~~~~~~~~~~~~~~~~~~n~~~c~~ 193 (593)
++|+++.+++. +..++. .+....+.+|+..|.-
T Consensus 529 ~~N~l~~~p~~-~~~l~~-----~L~~l~l~~N~~~c~c 561 (606)
T 3vq2_A 529 SFNRIETSKGI-LQHFPK-----SLAFFNLTNNSVACIC 561 (606)
T ss_dssp TTSCCCCEESC-GGGSCT-----TCCEEECCSCCCCCSS
T ss_pred CCCcCcccCHh-Hhhhcc-----cCcEEEccCCCcccCC
Confidence 77777753333 444331 2445567788877743
No 289
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.79 E-value=1.7e-19 Score=199.40 Aligned_cols=158 Identities=23% Similarity=0.258 Sum_probs=87.9
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhh
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLL 80 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 80 (593)
|+.|+|++|.|+ .+|+..+..+++|++|+|++|.|++..+..|.++++|+.|+|++|.+++..|..|+.+++|++|+|+
T Consensus 101 L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 179 (597)
T 3oja_B 101 IQKLYMGFNAIR-YLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLS 179 (597)
T ss_dssp CCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECT
T ss_pred CCEEECCCCcCC-CCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECc
Confidence 566777777776 4554443447777777777777775444456777777777777777776666677777777777665
Q ss_pred ccee--------------eccCCcccc-------------------cCCC-cccccEEEccCCcccCcCCCCCCCCCCCC
Q 007680 81 MFGI--------------RLTGNKLYG-------------------RIPP-CLVLTVLDVSRNQLSGDIPSTIGGRVDLE 126 (593)
Q Consensus 81 ~n~l--------------~l~~n~l~~-------------------~~~~-~~~L~~L~l~~N~l~~~~p~~~~~l~~L~ 126 (593)
+|.+ ++++|.+.+ ..+. ...|+.|+|++|.+++ +..+..+++|+
T Consensus 180 ~N~l~~~~~~~l~~L~~L~l~~n~l~~l~~~~~L~~L~ls~n~l~~~~~~~~~~L~~L~L~~n~l~~--~~~l~~l~~L~ 257 (597)
T 3oja_B 180 SNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVELTILKLQHNNLTD--TAWLLNYPGLV 257 (597)
T ss_dssp TSCCSBCCGGGCTTCSEEECCSSCCSEEECCTTCSEEECCSSCCCEEECSCCSCCCEEECCSSCCCC--CGGGGGCTTCS
T ss_pred CCCCCCcChhhhhhhhhhhcccCccccccCCchhheeeccCCcccccccccCCCCCEEECCCCCCCC--ChhhccCCCCC
Confidence 5432 122222211 0000 0113444444444432 12345555555
Q ss_pred EecCCCccCCCCCCccccCCccccccccccccccC
Q 007680 127 TLSLASNQFQGPIPESVGSLISLESLDLSGNNLSG 161 (593)
Q Consensus 127 ~L~l~~N~l~~~~p~~l~~~~~L~~L~l~~N~l~~ 161 (593)
.|+|++|.|++.+|..|..+++|+.|+|++|++++
T Consensus 258 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 292 (597)
T 3oja_B 258 EVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA 292 (597)
T ss_dssp EEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE
T ss_pred EEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC
Confidence 55555555555555555555555555555555555
No 290
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.79 E-value=2e-19 Score=188.07 Aligned_cols=158 Identities=22% Similarity=0.237 Sum_probs=82.9
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhh
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLL 80 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 80 (593)
|++|+|++|+++ .+|...+..+++|++|+|++|+|+...+..|.++++|+.|+|++|.+++..|..|..+++|++|+|+
T Consensus 95 L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 173 (390)
T 3o6n_A 95 IQKLYMGFNAIR-YLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLS 173 (390)
T ss_dssp CCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECC
T ss_pred cCEEECCCCCCC-cCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECC
Confidence 456666666666 4444433346666666666666663333345666677777777777666556666666677766555
Q ss_pred ccee--------------eccCCcccc-------------------cCC-CcccccEEEccCCcccCcCCCCCCCCCCCC
Q 007680 81 MFGI--------------RLTGNKLYG-------------------RIP-PCLVLTVLDVSRNQLSGDIPSTIGGRVDLE 126 (593)
Q Consensus 81 ~n~l--------------~l~~n~l~~-------------------~~~-~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~ 126 (593)
+|.+ ++++|.+.+ .-. ....|++|++++|.+++ + ..+..+++|+
T Consensus 174 ~n~l~~~~~~~l~~L~~L~l~~n~l~~~~~~~~L~~L~l~~n~l~~~~~~~~~~L~~L~l~~n~l~~-~-~~l~~l~~L~ 251 (390)
T 3o6n_A 174 SNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVELTILKLQHNNLTD-T-AWLLNYPGLV 251 (390)
T ss_dssp SSCCSBCCGGGCTTCSEEECCSSCCSEEECCSSCSEEECCSSCCCEEECCCCSSCCEEECCSSCCCC-C-GGGGGCTTCS
T ss_pred CCcCCccccccccccceeecccccccccCCCCcceEEECCCCeeeeccccccccccEEECCCCCCcc-c-HHHcCCCCcc
Confidence 4432 112221110 000 00123444444444432 1 2344555566
Q ss_pred EecCCCccCCCCCCccccCCccccccccccccccC
Q 007680 127 TLSLASNQFQGPIPESVGSLISLESLDLSGNNLSG 161 (593)
Q Consensus 127 ~L~l~~N~l~~~~p~~l~~~~~L~~L~l~~N~l~~ 161 (593)
+|++++|++++..|..+..+++|+.|++++|++++
T Consensus 252 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 286 (390)
T 3o6n_A 252 EVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA 286 (390)
T ss_dssp EEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE
T ss_pred EEECCCCcCCCcChhHccccccCCEEECCCCcCcc
Confidence 66666665555455555555555555555555554
No 291
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.79 E-value=2.2e-19 Score=201.65 Aligned_cols=180 Identities=22% Similarity=0.252 Sum_probs=101.8
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccC--------------------------CccCCCCCCCcEEE
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTI--------------------------PNSITNATKLIVLD 54 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~--------------------------p~~~~~l~~L~~L~ 54 (593)
|+.|+|++|.+++.+|...+.++++|++|+|++|++++.. |..|.++++|+.|+
T Consensus 407 L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~ 486 (680)
T 1ziw_A 407 LEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILD 486 (680)
T ss_dssp CCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEE
T ss_pred CCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEE
Confidence 4566666666665555444444666666666666655433 33444444455555
Q ss_pred ccCCcccccccccccCCCCchhhhhhcceeeccCCccccc------------CCCcccccEEEccCCcccCcCCCCCCCC
Q 007680 55 LGFNSFSGHILNTFGNLRHLSVLSLLMFGIRLTGNKLYGR------------IPPCLVLTVLDVSRNQLSGDIPSTIGGR 122 (593)
Q Consensus 55 L~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~l~~n~l~~~------------~~~~~~L~~L~l~~N~l~~~~p~~~~~l 122 (593)
|++|+|++..|..|..+++|++| ++++|++++. +..+..|++|+|++|+++...+..|.++
T Consensus 487 Ls~N~l~~i~~~~~~~l~~L~~L-------~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l 559 (680)
T 1ziw_A 487 LSNNNIANINDDMLEGLEKLEIL-------DLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDL 559 (680)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEE-------ECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred CCCCCCCcCChhhhccccccCEE-------eCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccc
Confidence 55555544444444445555544 4555555421 2333446666666666664333456666
Q ss_pred CCCCEecCCCccCCCCCCccccCCccccccccccccccCCCCCCCCCCCCCCCccCCCcccccCCccCCC
Q 007680 123 VDLETLSLASNQFQGPIPESVGSLISLESLDLSGNNLSGKIPKLEGEIPVKGSFKNFSTESFFGNYALCG 192 (593)
Q Consensus 123 ~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~~~~~~~~n~~~c~ 192 (593)
++|+.|+|++|+|++..+..|.++++|+.|++++|++++..|..+. ..+.++....+.+||+.|.
T Consensus 560 ~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~-----~~~~~L~~l~l~~N~~~c~ 624 (680)
T 1ziw_A 560 FELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFG-----PAFRNLTELDMRFNPFDCT 624 (680)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHH-----HHHTTCSEEECTTCCCCBC
T ss_pred cCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhc-----ccccccCEEEccCCCcccC
Confidence 6666666666666655555556666666666666666665554332 0233455677889999885
No 292
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.79 E-value=2.1e-19 Score=182.07 Aligned_cols=158 Identities=22% Similarity=0.235 Sum_probs=92.2
Q ss_pred CcEEEeeCccccccCChhhh-hCCCCCcEEECCCCcCcccCCccCCCC-----CCCcEEEccCCcccccccccccCCCCc
Q 007680 1 MRILTLEGNQLSGRLPSTIG-HSLPNIEYLLLTANNLTGTIPNSITNA-----TKLIVLDLGFNSFSGHILNTFGNLRHL 74 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~-~~l~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~~l~~L 74 (593)
|++|+|++|++++.+|..++ ..+++|++|+|++|+|++. |..+.++ ++|++|+|++|++++..|+.|+.+++|
T Consensus 97 L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L 175 (312)
T 1wwl_A 97 LQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPAL 175 (312)
T ss_dssp CCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSC
T ss_pred ccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCC
Confidence 45666777766666666552 3466666666666666654 5555554 666666666666665555666666666
Q ss_pred hhhhhhcce---------------------eeccCCcccc--cCC-----CcccccEEEccCCcccCcCC-CCCCCCCCC
Q 007680 75 SVLSLLMFG---------------------IRLTGNKLYG--RIP-----PCLVLTVLDVSRNQLSGDIP-STIGGRVDL 125 (593)
Q Consensus 75 ~~L~l~~n~---------------------l~l~~n~l~~--~~~-----~~~~L~~L~l~~N~l~~~~p-~~~~~l~~L 125 (593)
++|+|++|. +++++|++.+ .++ .+..|++|++++|++++.+| ..+..+++|
T Consensus 176 ~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L 255 (312)
T 1wwl_A 176 STLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQL 255 (312)
T ss_dssp CEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTC
T ss_pred CEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCC
Confidence 666333222 1445555541 111 22346666666666665443 344556666
Q ss_pred CEecCCCccCCCCCCccccCCccccccccccccccCC
Q 007680 126 ETLSLASNQFQGPIPESVGSLISLESLDLSGNNLSGK 162 (593)
Q Consensus 126 ~~L~l~~N~l~~~~p~~l~~~~~L~~L~l~~N~l~~~ 162 (593)
+.|+|++|+|+ .+|..+. ++|+.||+++|++++.
T Consensus 256 ~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~ 289 (312)
T 1wwl_A 256 NSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN 289 (312)
T ss_dssp CEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC
T ss_pred CEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC
Confidence 66666666666 5555554 5666666666666654
No 293
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.79 E-value=1.1e-19 Score=183.61 Aligned_cols=163 Identities=28% Similarity=0.319 Sum_probs=118.3
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCcCccc--CCccCCCCCCCcEEEccCCcccccccccccCCCCchhhh
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGT--IPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLS 78 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~--~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 78 (593)
|+.|+|++|+++ .+|..++..+++|++|+|++|+|+.. .|..+..+++|++|+|++|.++ .+|..|..+++|++|
T Consensus 30 l~~L~L~~n~l~-~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L- 106 (306)
T 2z66_A 30 ATRLELESNKLQ-SLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHL- 106 (306)
T ss_dssp CCEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEE-
T ss_pred CCEEECCCCccC-ccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCCccc-cChhhcCCCCCCCEE-
Confidence 578888888888 78877665688888888888888732 2566667888888888888888 566678888888888
Q ss_pred hhcceeeccCCcccc-----cCCCcccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCC-CCCccccCCcccccc
Q 007680 79 LLMFGIRLTGNKLYG-----RIPPCLVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQG-PIPESVGSLISLESL 152 (593)
Q Consensus 79 l~~n~l~l~~n~l~~-----~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~-~~p~~l~~~~~L~~L 152 (593)
++++|++.+ .+..+..|++|++++|.+++..|..|.++++|+.|++++|++++ .+|..+..+++|+.|
T Consensus 107 ------~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L 180 (306)
T 2z66_A 107 ------DFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFL 180 (306)
T ss_dssp ------ECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEE
T ss_pred ------ECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEE
Confidence 555555553 23334457777777777776677777777777777777777764 466777777777777
Q ss_pred ccccccccCCCCCCCCCCCC
Q 007680 153 DLSGNNLSGKIPKLEGEIPV 172 (593)
Q Consensus 153 ~l~~N~l~~~~p~~~~~~~~ 172 (593)
++++|++++..|..+..++.
T Consensus 181 ~Ls~n~l~~~~~~~~~~l~~ 200 (306)
T 2z66_A 181 DLSQCQLEQLSPTAFNSLSS 200 (306)
T ss_dssp ECTTSCCCEECTTTTTTCTT
T ss_pred ECCCCCcCCcCHHHhcCCCC
Confidence 77777777776666655543
No 294
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.79 E-value=2.2e-19 Score=192.97 Aligned_cols=166 Identities=24% Similarity=0.219 Sum_probs=131.5
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhh
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLL 80 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 80 (593)
|+.|+|++|+|+ .++...+..+++|++|+|++|+|++..|.+|.++++|+.|+|++|++++..+..|..+++|++|
T Consensus 34 l~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L--- 109 (477)
T 2id5_A 34 TRLLDLGKNRIK-TLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKL--- 109 (477)
T ss_dssp CSEEECCSSCCC-EECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEE---
T ss_pred CcEEECCCCccc-eECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEE---
Confidence 578888888888 5544434458888888888888888778888888888888888888886666678888888888
Q ss_pred cceeeccCCccccc----CCCcccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCCCCccccCCcccccccccc
Q 007680 81 MFGIRLTGNKLYGR----IPPCLVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIPESVGSLISLESLDLSG 156 (593)
Q Consensus 81 ~n~l~l~~n~l~~~----~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~l~~ 156 (593)
++++|++.+. +..+..|++|++++|.+++..|..|.++++|+.|++++|++++..+..+..+++|+.|++++
T Consensus 110 ----~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~ 185 (477)
T 2id5_A 110 ----DISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRH 185 (477)
T ss_dssp ----ECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEES
T ss_pred ----ECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCC
Confidence 7777777643 34455688899999988877788888888899999999988866666788888899999999
Q ss_pred ccccCCCCCCCCCCCCCC
Q 007680 157 NNLSGKIPKLEGEIPVKG 174 (593)
Q Consensus 157 N~l~~~~p~~~~~~~~~~ 174 (593)
|++++..+..+..++.+.
T Consensus 186 n~i~~~~~~~~~~l~~L~ 203 (477)
T 2id5_A 186 LNINAIRDYSFKRLYRLK 203 (477)
T ss_dssp CCCCEECTTCSCSCTTCC
T ss_pred CcCcEeChhhcccCcccc
Confidence 888887777666655443
No 295
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.79 E-value=2e-19 Score=178.74 Aligned_cols=158 Identities=25% Similarity=0.218 Sum_probs=128.6
Q ss_pred EEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhhcc
Q 007680 3 ILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLLMF 82 (593)
Q Consensus 3 ~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n 82 (593)
.++.++.++. .+|..+. ++|++|+|++|+|++..+..|.++++|+.|+|++|++++..+..|..+++|++|
T Consensus 11 ~~~c~~~~l~-~ip~~l~---~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L----- 81 (276)
T 2z62_A 11 TYQCMELNFY-KIPDNLP---FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTL----- 81 (276)
T ss_dssp EEECTTSCCS-SCCSSSC---TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEE-----
T ss_pred eEEecCCCcc-ccCCCCC---CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEE-----
Confidence 4677788887 7887654 478999999999997777788999999999999999987777789999999998
Q ss_pred eeeccCCccccc----CCCcccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCC-CCccccCCccccccccccc
Q 007680 83 GIRLTGNKLYGR----IPPCLVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGP-IPESVGSLISLESLDLSGN 157 (593)
Q Consensus 83 ~l~l~~n~l~~~----~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~-~p~~l~~~~~L~~L~l~~N 157 (593)
++++|++.+. +..+..|++|++++|++++..+..++++++|+.|++++|++++. +|..+..+++|+.|++++|
T Consensus 82 --~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N 159 (276)
T 2z62_A 82 --ILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSN 159 (276)
T ss_dssp --ECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSS
T ss_pred --ECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCC
Confidence 7777777643 44455699999999999876666788999999999999999853 5888999999999999999
Q ss_pred cccCCCCCCCCCCC
Q 007680 158 NLSGKIPKLEGEIP 171 (593)
Q Consensus 158 ~l~~~~p~~~~~~~ 171 (593)
++++..+..+..++
T Consensus 160 ~l~~~~~~~~~~l~ 173 (276)
T 2z62_A 160 KIQSIYCTDLRVLH 173 (276)
T ss_dssp CCCEECGGGGHHHH
T ss_pred CCCcCCHHHhhhhh
Confidence 99887776554444
No 296
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.79 E-value=1.7e-19 Score=199.65 Aligned_cols=175 Identities=22% Similarity=0.202 Sum_probs=98.2
Q ss_pred cEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCcc-CCCCCCCcEEEccCCcccccccccccCCCCchhhhhh
Q 007680 2 RILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNS-ITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLL 80 (593)
Q Consensus 2 ~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 80 (593)
++|+|++|++.+..|..+. .+++|++|+|++|++++..|.. |.++++|+.|+|++|.+++..|..|+.+++|++|
T Consensus 379 ~~L~l~~n~l~~~~~~~~~-~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L--- 454 (606)
T 3t6q_A 379 QSLNLSYNEPLSLKTEAFK-ECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHL--- 454 (606)
T ss_dssp CEEECCSCSCEEECTTTTT-TCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEE---
T ss_pred CEEECCCCcCCcCCHHHhc-CCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEE---
Confidence 3444444444422222222 2444444444444444333322 4444444444444444444444444444555544
Q ss_pred cceeeccCCcccc-------cCCCcccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCCCCccccCCccccccc
Q 007680 81 MFGIRLTGNKLYG-------RIPPCLVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIPESVGSLISLESLD 153 (593)
Q Consensus 81 ~n~l~l~~n~l~~-------~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~ 153 (593)
++++|++.+ .+..+..|++|++++|++++..|..|.++++|+.|+|++|++++..|..+..++.| .|+
T Consensus 455 ----~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~ 529 (606)
T 3t6q_A 455 ----NLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLN 529 (606)
T ss_dssp ----ECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEE
T ss_pred ----ECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEE
Confidence 555665543 12233457777777777776666777777777777777777776667777777777 777
Q ss_pred cccccccCCCCCCCCCCCCCCCccCCCcccccCCccCC
Q 007680 154 LSGNNLSGKIPKLEGEIPVKGSFKNFSTESFFGNYALC 191 (593)
Q Consensus 154 l~~N~l~~~~p~~~~~~~~~~~~~~~~~~~~~~n~~~c 191 (593)
+++|++++.+|..+..++ .+....+.+|+..|
T Consensus 530 L~~N~l~~~~~~~~~~l~------~L~~L~l~~N~~~c 561 (606)
T 3t6q_A 530 LASNHISIILPSLLPILS------QQRTINLRQNPLDC 561 (606)
T ss_dssp CCSSCCCCCCGGGHHHHH------TSSEEECTTCCEEC
T ss_pred CcCCcccccCHhhcccCC------CCCEEeCCCCCccc
Confidence 777777766666544333 34456677887766
No 297
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.78 E-value=1.7e-19 Score=177.33 Aligned_cols=137 Identities=20% Similarity=0.250 Sum_probs=107.7
Q ss_pred ccccccccCccCcccEEEEEe-CCCCe--EEEEEeehhhH------------------------HHHHHHHHHHHHHhhc
Q 007680 273 EFNECNLLGTSSFGSVYKGTI-SDGTD--VAIKVFNLQLE------------------------RAFRSFDSECEVLRNV 325 (593)
Q Consensus 273 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~------------------------~~~~~~~~E~~~l~~l 325 (593)
-|++.+.||+|+||.||+|.. .+|+. ||||+++.... .....+.+|+.++.++
T Consensus 48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 127 (258)
T 1zth_A 48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA 127 (258)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence 367889999999999999997 68889 99998754311 1123678999999999
Q ss_pred CCCCc--ceeeeeeecCCceEEEEeccCC-C----CHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHH-hcCCCCCeEec
Q 007680 326 RHRNL--IKILSSYSNPDFKALVLEFMPN-G----SLEKWLYSHNYFLDILERLNIMIDVGSALEYLH-NGHSSVHIIHC 397 (593)
Q Consensus 326 ~h~ni--v~l~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH-~~~~~~~ivH~ 397 (593)
.|+++ ..+++. +..++||||+.+ | +|.++... .++..+..++.|++.||.||| +.+ |+||
T Consensus 128 ~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~----~~~~~~~~i~~qi~~~l~~lH~~~g----ivHr 195 (258)
T 1zth_A 128 KEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE----LKELDVEGIFNDVVENVKRLYQEAE----LVHA 195 (258)
T ss_dssp HHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG----GGGSCHHHHHHHHHHHHHHHHHTSC----EECS
T ss_pred HhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc----cChHHHHHHHHHHHHHHHHHHHHCC----EEeC
Confidence 88764 334432 356899999942 3 77776543 234567889999999999999 655 9999
Q ss_pred CCCCCCeeeCCCCcEEEEeeccceec
Q 007680 398 DLKPTNILLDENMVAHVSDFGIYKLL 423 (593)
Q Consensus 398 Dlkp~NIll~~~~~~kL~Dfg~a~~~ 423 (593)
||||+|||+++ .++|+|||+|...
T Consensus 196 Dlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 196 DLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp SCSTTSEEESS--SEEECCCTTCEET
T ss_pred CCCHHHEEEcC--cEEEEECcccccC
Confidence 99999999998 9999999999764
No 298
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.78 E-value=3.2e-19 Score=180.55 Aligned_cols=159 Identities=19% Similarity=0.174 Sum_probs=84.0
Q ss_pred CcEEEeeCccccccCChhhh-hCCCCCcEEECCCCcCcccCC----ccCCCCCCCcEEEccCCcccccccccccCCCCch
Q 007680 1 MRILTLEGNQLSGRLPSTIG-HSLPNIEYLLLTANNLTGTIP----NSITNATKLIVLDLGFNSFSGHILNTFGNLRHLS 75 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~-~~l~~L~~L~L~~N~l~~~~p----~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 75 (593)
|+.|+|++|++.+.+|..++ ..+++|++|+|++|+|++..| ..+..+++|+.|+|++|++++..|..|+.+++|+
T Consensus 93 L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 172 (310)
T 4glp_A 93 LKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALT 172 (310)
T ss_dssp CCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCC
T ss_pred eeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCC
Confidence 45666666666655555442 235555555555555554333 2234455555555555555544445555555555
Q ss_pred hhhhhccee---------------------eccCCcccc--c-----CCCcccccEEEccCCcccCcCCCCCCCC---CC
Q 007680 76 VLSLLMFGI---------------------RLTGNKLYG--R-----IPPCLVLTVLDVSRNQLSGDIPSTIGGR---VD 124 (593)
Q Consensus 76 ~L~l~~n~l---------------------~l~~n~l~~--~-----~~~~~~L~~L~l~~N~l~~~~p~~~~~l---~~ 124 (593)
+|+|++|.+ ++++|+++. . +..+..|++|+|++|+|++..|..+..+ ++
T Consensus 173 ~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~ 252 (310)
T 4glp_A 173 SLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSA 252 (310)
T ss_dssp EEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTT
T ss_pred EEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCc
Confidence 552222210 444555531 1 1122346666666666665555555554 46
Q ss_pred CCEecCCCccCCCCCCccccCCccccccccccccccCC
Q 007680 125 LETLSLASNQFQGPIPESVGSLISLESLDLSGNNLSGK 162 (593)
Q Consensus 125 L~~L~l~~N~l~~~~p~~l~~~~~L~~L~l~~N~l~~~ 162 (593)
|+.|+|++|+|+ .+|..+. ++|+.|++++|++++.
T Consensus 253 L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~ 287 (310)
T 4glp_A 253 LNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA 287 (310)
T ss_dssp CCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC
T ss_pred CCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC
Confidence 666666666666 4555543 5666666666666653
No 299
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.78 E-value=5.3e-19 Score=188.65 Aligned_cols=157 Identities=24% Similarity=0.226 Sum_probs=107.5
Q ss_pred CcEEEeeCccccccCChhhhhC--------------------------------------CCCCcEEECCCCcCcccCCc
Q 007680 1 MRILTLEGNQLSGRLPSTIGHS--------------------------------------LPNIEYLLLTANNLTGTIPN 42 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~--------------------------------------l~~L~~L~L~~N~l~~~~p~ 42 (593)
|+.|+|++|++++.+|..+... .++|+.|+|++|+|++..|.
T Consensus 214 L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~ 293 (455)
T 3v47_A 214 ITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKS 293 (455)
T ss_dssp EEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTT
T ss_pred eeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCcccccccccccCceEEEecCccccccchh
Confidence 5788999999887777666531 14677777777777766677
Q ss_pred cCCCCCCCcEEEccCCcccccccccccCCCCchhhhhhcceeeccCCccccc----CCCcccccEEEccCCcccCcCCCC
Q 007680 43 SITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLLMFGIRLTGNKLYGR----IPPCLVLTVLDVSRNQLSGDIPST 118 (593)
Q Consensus 43 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~l~~n~l~~~----~~~~~~L~~L~l~~N~l~~~~p~~ 118 (593)
.|..+++|+.|+|++|++++..|..|..+++|++| ++++|++.+. +..+..|++|+|++|++++..|..
T Consensus 294 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L-------~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 366 (455)
T 3v47_A 294 VFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKL-------NLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQS 366 (455)
T ss_dssp TTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE-------ECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTT
T ss_pred hcccCCCCCEEECCCCcccccChhHhcCcccCCEE-------ECCCCccCCcChhHhcCcccCCEEECCCCcccccChhh
Confidence 77777777777777777776666677777777777 5566665533 233445777777777777666667
Q ss_pred CCCCCCCCEecCCCccCCCCCCccccCCccccccccccccccCCCC
Q 007680 119 IGGRVDLETLSLASNQFQGPIPESVGSLISLESLDLSGNNLSGKIP 164 (593)
Q Consensus 119 ~~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~l~~N~l~~~~p 164 (593)
|.++++|++|++++|+|++..+..+..+++|+.|++++|++++..|
T Consensus 367 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 367 FLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp TTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred ccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 7777777777777777775555556677777777777777776555
No 300
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.77 E-value=3.4e-19 Score=184.29 Aligned_cols=153 Identities=28% Similarity=0.249 Sum_probs=130.6
Q ss_pred CcEEEeeCccccccCChhhhh-CCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhh
Q 007680 1 MRILTLEGNQLSGRLPSTIGH-SLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSL 79 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 79 (593)
|+.|+|++|+|+ .+|...+. .+++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|
T Consensus 41 l~~L~Ls~N~l~-~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L-- 117 (361)
T 2xot_A 41 TALLDLSHNNLS-RLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVL-- 117 (361)
T ss_dssp CSEEECCSSCCC-EECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEE--
T ss_pred CCEEECCCCCCC-ccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEE--
Confidence 578999999999 78777664 69999999999999998888899999999999999999998778889999999999
Q ss_pred hcceeeccCCcccc----cCCCcccccEEEccCCcccCcCCCCC---CCCCCCCEecCCCccCCCCCCccccCCcc--cc
Q 007680 80 LMFGIRLTGNKLYG----RIPPCLVLTVLDVSRNQLSGDIPSTI---GGRVDLETLSLASNQFQGPIPESVGSLIS--LE 150 (593)
Q Consensus 80 ~~n~l~l~~n~l~~----~~~~~~~L~~L~l~~N~l~~~~p~~~---~~l~~L~~L~l~~N~l~~~~p~~l~~~~~--L~ 150 (593)
+|++|++.+ .+..+..|++|+|++|+|++..+..| ..+++|+.|+|++|+|++..+..+..++. |+
T Consensus 118 -----~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~ 192 (361)
T 2xot_A 118 -----LLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKN 192 (361)
T ss_dssp -----ECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHT
T ss_pred -----ECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcc
Confidence 778888774 34456679999999999996544445 57999999999999999666677888887 48
Q ss_pred ccccccccccC
Q 007680 151 SLDLSGNNLSG 161 (593)
Q Consensus 151 ~L~l~~N~l~~ 161 (593)
.|+|++|++.-
T Consensus 193 ~l~l~~N~~~C 203 (361)
T 2xot_A 193 GLYLHNNPLEC 203 (361)
T ss_dssp TEECCSSCEEC
T ss_pred eEEecCCCccC
Confidence 99999999973
No 301
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.77 E-value=1.2e-18 Score=191.22 Aligned_cols=156 Identities=21% Similarity=0.265 Sum_probs=129.5
Q ss_pred hCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCccccc--ccccccCCCCchhhhhhcceeeccCCcccccCCC-
Q 007680 21 HSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGH--ILNTFGNLRHLSVLSLLMFGIRLTGNKLYGRIPP- 97 (593)
Q Consensus 21 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~p~~~~~l~~L~~L~l~~n~l~l~~n~l~~~~~~- 97 (593)
..+++|++|+|++|+|++..|..|.++++|+.|+|++|++++. +|..|..+++|++| ++++|++.+.+|.
T Consensus 350 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L-------~l~~N~l~~~~~~~ 422 (562)
T 3a79_B 350 PSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETL-------DVSLNSLNSHAYDR 422 (562)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEE-------ECTTSCCBSCCSSC
T ss_pred cCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEE-------ECCCCcCCCccChh
Confidence 3478999999999999988999999999999999999999963 35679999999999 8888888764443
Q ss_pred ----cccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCCCCccccCCccccccccccccccCCCCCCCCCCCCC
Q 007680 98 ----CLVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIPESVGSLISLESLDLSGNNLSGKIPKLEGEIPVK 173 (593)
Q Consensus 98 ----~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~l~~N~l~~~~p~~~~~~~~~ 173 (593)
+..|++|++++|++++.+|..+. ++|+.|++++|+|+ .+|..+..+++|+.|++++|+++++++..+..++
T Consensus 423 ~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~-- 497 (562)
T 3a79_B 423 TCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVFDRLT-- 497 (562)
T ss_dssp CCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCT--
T ss_pred hhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCCHHHHhcCC--
Confidence 45699999999999888877664 78999999999998 7888888999999999999999976655455444
Q ss_pred CCccCCCcccccCCccCCC
Q 007680 174 GSFKNFSTESFFGNYALCG 192 (593)
Q Consensus 174 ~~~~~~~~~~~~~n~~~c~ 192 (593)
.+......+|++.|.
T Consensus 498 ----~L~~L~l~~N~~~c~ 512 (562)
T 3a79_B 498 ----SLQYIWLHDNPWDCT 512 (562)
T ss_dssp ----TCCCEECCSCCBCCC
T ss_pred ----CCCEEEecCCCcCCC
Confidence 444567888888763
No 302
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.77 E-value=1.2e-18 Score=189.42 Aligned_cols=155 Identities=22% Similarity=0.234 Sum_probs=128.2
Q ss_pred CCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccc--cccccccCCCCchhhhhhcceeeccCCcccccCC---
Q 007680 22 SLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSG--HILNTFGNLRHLSVLSLLMFGIRLTGNKLYGRIP--- 96 (593)
Q Consensus 22 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~l~~n~l~l~~n~l~~~~~--- 96 (593)
.+++|++|+|++|+|++..|..|.++++|+.|+|++|++++ .+|..|+.+++|++| ++++|++.+.+|
T Consensus 322 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L-------~Ls~N~l~~~l~~~~ 394 (520)
T 2z7x_B 322 KISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQL-------DISQNSVSYDEKKGD 394 (520)
T ss_dssp SCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEE-------ECCSSCCBCCGGGCS
T ss_pred hCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEE-------ECCCCcCCcccccch
Confidence 57899999999999998889999999999999999999996 456789999999999 888888876444
Q ss_pred --CcccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCCCCccccCCccccccccccccccCCCCCCCCCCCCCC
Q 007680 97 --PCLVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIPESVGSLISLESLDLSGNNLSGKIPKLEGEIPVKG 174 (593)
Q Consensus 97 --~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~l~~N~l~~~~p~~~~~~~~~~ 174 (593)
.+..|++|++++|++++..|..+. ++|+.|++++|+|+ .+|..+..+++|+.|++++|+++++++..+..++
T Consensus 395 ~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~--- 468 (520)
T 2z7x_B 395 CSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLT--- 468 (520)
T ss_dssp CCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCT---
T ss_pred hccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCHHHhccCC---
Confidence 345699999999999888887664 78999999999998 7888888999999999999999976555444443
Q ss_pred CccCCCcccccCCccCCC
Q 007680 175 SFKNFSTESFFGNYALCG 192 (593)
Q Consensus 175 ~~~~~~~~~~~~n~~~c~ 192 (593)
++......+|+..|.
T Consensus 469 ---~L~~L~l~~N~~~c~ 483 (520)
T 2z7x_B 469 ---SLQKIWLHTNPWDCS 483 (520)
T ss_dssp ---TCCEEECCSSCBCCC
T ss_pred ---cccEEECcCCCCccc
Confidence 445567888888763
No 303
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.77 E-value=1.5e-19 Score=183.02 Aligned_cols=156 Identities=24% Similarity=0.314 Sum_probs=122.4
Q ss_pred CcEEEeeCcccc-ccCChhhh------hCCCCCcEEECCCCcCcccCCccC--CCCCCCcEEEccCCcccccccccccCC
Q 007680 1 MRILTLEGNQLS-GRLPSTIG------HSLPNIEYLLLTANNLTGTIPNSI--TNATKLIVLDLGFNSFSGHILNTFGNL 71 (593)
Q Consensus 1 L~~L~Ls~n~l~-~~lp~~~~------~~l~~L~~L~L~~N~l~~~~p~~~--~~l~~L~~L~L~~N~l~~~~p~~~~~l 71 (593)
|+.|+|++|++. +.+|..++ ..+++|++|+|++|+|++.+|..+ ..+++|+.|+|++|++++. |..|+.+
T Consensus 65 L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l 143 (312)
T 1wwl_A 65 IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAEL 143 (312)
T ss_dssp HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHH
T ss_pred HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHH
Confidence 467899999994 56787765 138999999999999999999986 8999999999999999976 8888887
Q ss_pred -----CCchhhhhhcceeeccCCcccccC----CCcccccEEEccCCcccCc--CCCCC--CCCCCCCEecCCCccCCCC
Q 007680 72 -----RHLSVLSLLMFGIRLTGNKLYGRI----PPCLVLTVLDVSRNQLSGD--IPSTI--GGRVDLETLSLASNQFQGP 138 (593)
Q Consensus 72 -----~~L~~L~l~~n~l~l~~n~l~~~~----~~~~~L~~L~l~~N~l~~~--~p~~~--~~l~~L~~L~l~~N~l~~~ 138 (593)
++|++| ++++|++.+.. ..+..|++|++++|++.+. .|..+ .++++|++|+|++|+|++.
T Consensus 144 ~~~~~~~L~~L-------~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~ 216 (312)
T 1wwl_A 144 QQWLKPGLKVL-------SIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETP 216 (312)
T ss_dssp HTTCCTTCCEE-------EEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCH
T ss_pred HHhhcCCCcEE-------EeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcch
Confidence 899999 77777776433 3445689999999987754 23233 7888888888888888731
Q ss_pred --CC-ccccCCccccccccccccccCCCC
Q 007680 139 --IP-ESVGSLISLESLDLSGNNLSGKIP 164 (593)
Q Consensus 139 --~p-~~l~~~~~L~~L~l~~N~l~~~~p 164 (593)
++ ..+..+++|+.|++++|++++.+|
T Consensus 217 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 245 (312)
T 1wwl_A 217 SGVCSALAAARVQLQGLDLSHNSLRDAAG 245 (312)
T ss_dssp HHHHHHHHHTTCCCSEEECTTSCCCSSCC
T ss_pred HHHHHHHHhcCCCCCEEECCCCcCCcccc
Confidence 12 334567888888888888888664
No 304
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.77 E-value=2.3e-18 Score=180.06 Aligned_cols=130 Identities=25% Similarity=0.312 Sum_probs=112.6
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhh
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLL 80 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 80 (593)
|+.|++++|.++ .+|..++..+++|++|+|++|+|++..+..|.++++|+.|+|++|.+++..|..|+.+++|++|
T Consensus 47 l~~l~l~~~~l~-~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L--- 122 (390)
T 3o6n_A 47 QKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL--- 122 (390)
T ss_dssp CSEEEEESCEES-EECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE---
T ss_pred ceEEEecCCchh-hCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEE---
Confidence 578999999998 8998877679999999999999998777899999999999999999998888889999999999
Q ss_pred cceeeccCCccccc----CCCcccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCC
Q 007680 81 MFGIRLTGNKLYGR----IPPCLVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGP 138 (593)
Q Consensus 81 ~n~l~l~~n~l~~~----~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 138 (593)
++++|++... +..+..|++|++++|++++..|..|.++++|+.|++++|++++.
T Consensus 123 ----~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 180 (390)
T 3o6n_A 123 ----VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV 180 (390)
T ss_dssp ----ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC
T ss_pred ----ECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc
Confidence 7777777632 23445699999999999987788899999999999999998854
No 305
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.76 E-value=2e-18 Score=176.15 Aligned_cols=166 Identities=21% Similarity=0.249 Sum_probs=132.7
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhh
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLL 80 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 80 (593)
|+.|+|++|+++ .+|...+..+++|++|+|++|+|++..|..|.++++|++|+|++|+++ .+|..+. ++|++|+++
T Consensus 54 l~~L~L~~n~i~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l~ 129 (330)
T 1xku_A 54 TALLDLQNNKIT-EIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRVH 129 (330)
T ss_dssp CCEEECCSSCCC-CBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEECC
T ss_pred CeEEECCCCcCC-EeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEECC
Confidence 578999999999 677654446999999999999999888999999999999999999999 5665554 688999776
Q ss_pred cce-----------------eeccCCcccc------cCCCcccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCC
Q 007680 81 MFG-----------------IRLTGNKLYG------RIPPCLVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQG 137 (593)
Q Consensus 81 ~n~-----------------l~l~~n~l~~------~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 137 (593)
+|. +++++|.+.. .+..+..|++|++++|.++ .+|..+. ++|+.|++++|++++
T Consensus 130 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~--~~L~~L~l~~n~l~~ 206 (330)
T 1xku_A 130 ENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLP--PSLTELHLDGNKITK 206 (330)
T ss_dssp SSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCC--TTCSEEECTTSCCCE
T ss_pred CCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc-cCCcccc--ccCCEEECCCCcCCc
Confidence 554 4566666642 2233445888888888888 4665553 789999999999998
Q ss_pred CCCccccCCccccccccccccccCCCCCCCCCCCCC
Q 007680 138 PIPESVGSLISLESLDLSGNNLSGKIPKLEGEIPVK 173 (593)
Q Consensus 138 ~~p~~l~~~~~L~~L~l~~N~l~~~~p~~~~~~~~~ 173 (593)
..|..+..+++|+.|++++|++++..+..+..++.+
T Consensus 207 ~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L 242 (330)
T 1xku_A 207 VDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHL 242 (330)
T ss_dssp ECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTC
T ss_pred cCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCC
Confidence 778899999999999999999999888766655543
No 306
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.76 E-value=7.6e-19 Score=195.14 Aligned_cols=157 Identities=25% Similarity=0.231 Sum_probs=129.0
Q ss_pred EEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhhcc
Q 007680 3 ILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLLMF 82 (593)
Q Consensus 3 ~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n 82 (593)
+.+.++.+|+ .+|.++. +++++|+|++|+|+++.|.+|.++++|++|+|++|+|+++.|++|.+|++|++|
T Consensus 35 ~~~c~~~~l~-~vP~~lp---~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L----- 105 (635)
T 4g8a_A 35 TYQCMELNFY-KIPDNLP---FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTL----- 105 (635)
T ss_dssp EEECTTSCCS-SCCSSSC---TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEE-----
T ss_pred EEECCCCCcC-ccCCCCC---cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEE-----
Confidence 4577788888 8887654 378999999999997777789999999999999999997778889999999999
Q ss_pred eeeccCCcccc----cCCCcccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCC-CCCccccCCccccccccccc
Q 007680 83 GIRLTGNKLYG----RIPPCLVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQG-PIPESVGSLISLESLDLSGN 157 (593)
Q Consensus 83 ~l~l~~n~l~~----~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~-~~p~~l~~~~~L~~L~l~~N 157 (593)
+|++|+|++ .+.++.+|++|+|++|+|++..+..|+++++|++|+|++|++++ .+|..+..+++|+.|++++|
T Consensus 106 --~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N 183 (635)
T 4g8a_A 106 --ILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSN 183 (635)
T ss_dssp --ECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSS
T ss_pred --EccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCc
Confidence 777777763 34456679999999999987777778999999999999999875 35778888999999999999
Q ss_pred cccCCCCCCCCCC
Q 007680 158 NLSGKIPKLEGEI 170 (593)
Q Consensus 158 ~l~~~~p~~~~~~ 170 (593)
++++..|..+..+
T Consensus 184 ~l~~~~~~~l~~L 196 (635)
T 4g8a_A 184 KIQSIYCTDLRVL 196 (635)
T ss_dssp CCCEECGGGGHHH
T ss_pred cccccccccccch
Confidence 9988877755433
No 307
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.76 E-value=9.8e-19 Score=194.26 Aligned_cols=161 Identities=26% Similarity=0.239 Sum_probs=139.2
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhh
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLL 80 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 80 (593)
+++|||++|+|+ .+|+..+.++++|++|+|++|+|+++.|++|.+|++|++|+|++|+|++..++.|.+|++|++|
T Consensus 54 ~~~LdLs~N~i~-~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L--- 129 (635)
T 4g8a_A 54 TKNLDLSFNPLR-HLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKL--- 129 (635)
T ss_dssp CCEEECTTSCCC-EECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEE---
T ss_pred CCEEEeeCCCCC-CCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEE---
Confidence 579999999999 7887666679999999999999998778899999999999999999998778889999999999
Q ss_pred cceeeccCCcccc----cCCCcccccEEEccCCcccCc-CCCCCCCCCCCCEecCCCccCCCCCCccccCCcccc----c
Q 007680 81 MFGIRLTGNKLYG----RIPPCLVLTVLDVSRNQLSGD-IPSTIGGRVDLETLSLASNQFQGPIPESVGSLISLE----S 151 (593)
Q Consensus 81 ~n~l~l~~n~l~~----~~~~~~~L~~L~l~~N~l~~~-~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~----~ 151 (593)
++++|++++ .+..+..|++|+|++|.+++. +|..++.+++|+.|++++|+|++..|..+..+.+++ .
T Consensus 130 ----~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~ 205 (635)
T 4g8a_A 130 ----VAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLS 205 (635)
T ss_dssp ----ECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCE
T ss_pred ----ECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhh
Confidence 778888774 244566799999999999753 577889999999999999999988888887776654 5
Q ss_pred cccccccccCCCCCCCCC
Q 007680 152 LDLSGNNLSGKIPKLEGE 169 (593)
Q Consensus 152 L~l~~N~l~~~~p~~~~~ 169 (593)
++++.|+++.+.+..+..
T Consensus 206 ~~ls~n~l~~i~~~~~~~ 223 (635)
T 4g8a_A 206 LDLSLNPMNFIQPGAFKE 223 (635)
T ss_dssp EECTTCCCCEECTTTTTT
T ss_pred hhcccCcccccCcccccc
Confidence 789999999887776543
No 308
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.76 E-value=1.7e-18 Score=162.98 Aligned_cols=145 Identities=18% Similarity=0.236 Sum_probs=120.3
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhh
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLL 80 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 80 (593)
|+.|+|++|+++ .+| ++.. +++|++|+|++|.++ . +..+..+++|++|+|++|++++..|..|+.+++|++|
T Consensus 46 L~~L~l~~n~i~-~l~-~l~~-l~~L~~L~l~~n~~~-~-~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L--- 117 (197)
T 4ezg_A 46 LTYITLANINVT-DLT-GIEY-AHNIKDLTINNIHAT-N-YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLL--- 117 (197)
T ss_dssp CCEEEEESSCCS-CCT-TGGG-CTTCSEEEEESCCCS-C-CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEE---
T ss_pred ccEEeccCCCcc-ChH-HHhc-CCCCCEEEccCCCCC-c-chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEE---
Confidence 678999999999 888 6664 999999999999887 3 3478899999999999999998788889999999999
Q ss_pred cceeeccCCccccc----CCCcccccEEEccCCc-ccCcCCCCCCCCCCCCEecCCCccCCCCCCccccCCccccccccc
Q 007680 81 MFGIRLTGNKLYGR----IPPCLVLTVLDVSRNQ-LSGDIPSTIGGRVDLETLSLASNQFQGPIPESVGSLISLESLDLS 155 (593)
Q Consensus 81 ~n~l~l~~n~l~~~----~~~~~~L~~L~l~~N~-l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~l~ 155 (593)
++++|++++. +..+..|++|++++|+ ++ .+| .+..+++|+.|++++|++++ ++ .+..+++|+.|+++
T Consensus 118 ----~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~ 189 (197)
T 4ezg_A 118 ----DISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAF 189 (197)
T ss_dssp ----ECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEEC
T ss_pred ----EecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEee
Confidence 7788888752 4455679999999998 66 566 68899999999999999984 55 78899999999999
Q ss_pred cccccC
Q 007680 156 GNNLSG 161 (593)
Q Consensus 156 ~N~l~~ 161 (593)
+|++.+
T Consensus 190 ~N~i~~ 195 (197)
T 4ezg_A 190 SQTIGG 195 (197)
T ss_dssp BC----
T ss_pred CcccCC
Confidence 999865
No 309
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.76 E-value=1.8e-19 Score=185.82 Aligned_cols=157 Identities=22% Similarity=0.223 Sum_probs=84.6
Q ss_pred EEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhhcce
Q 007680 4 LTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLLMFG 83 (593)
Q Consensus 4 L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~ 83 (593)
.++++|+++ .+|..++ ++|++|+|++|+|++..++.|.++++|+.|+|++|++++..|..|+.+++|++|
T Consensus 36 c~~~~~~l~-~iP~~~~---~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L------ 105 (353)
T 2z80_A 36 CKGSSGSLN-SIPSGLT---EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHL------ 105 (353)
T ss_dssp EECCSTTCS-SCCTTCC---TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE------
T ss_pred eeCCCCCcc-ccccccc---ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEE------
Confidence 455556665 5555443 355666666666664444455666666666666666655555556666666655
Q ss_pred eeccCCccccc----CCCcccccEEEccCCcccCcCC-CCCCCCCCCCEecCCCc-cCCCCCCccccCCccccccccccc
Q 007680 84 IRLTGNKLYGR----IPPCLVLTVLDVSRNQLSGDIP-STIGGRVDLETLSLASN-QFQGPIPESVGSLISLESLDLSGN 157 (593)
Q Consensus 84 l~l~~n~l~~~----~~~~~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~L~l~~N-~l~~~~p~~l~~~~~L~~L~l~~N 157 (593)
++++|++++. +..+..|++|++++|++++..+ ..|.++++|+.|++++| .+++..|..+.++++|+.|++++|
T Consensus 106 -~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n 184 (353)
T 2z80_A 106 -DLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDAS 184 (353)
T ss_dssp -ECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEET
T ss_pred -ECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCC
Confidence 4455554421 2223345666666666553222 24555666666666655 344344455555566666666666
Q ss_pred cccCCCCCCCCCCC
Q 007680 158 NLSGKIPKLEGEIP 171 (593)
Q Consensus 158 ~l~~~~p~~~~~~~ 171 (593)
++++..|..+..++
T Consensus 185 ~l~~~~~~~l~~l~ 198 (353)
T 2z80_A 185 DLQSYEPKSLKSIQ 198 (353)
T ss_dssp TCCEECTTTTTTCS
T ss_pred CcCccCHHHHhccc
Confidence 66555555444433
No 310
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.76 E-value=2.7e-19 Score=198.95 Aligned_cols=150 Identities=17% Similarity=0.279 Sum_probs=107.1
Q ss_pred cccccCChhhhhCCCCCcEEECCCCcCccc-----------------CCccCC--CCCCCcEEEccCCcccccccccccC
Q 007680 10 QLSGRLPSTIGHSLPNIEYLLLTANNLTGT-----------------IPNSIT--NATKLIVLDLGFNSFSGHILNTFGN 70 (593)
Q Consensus 10 ~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~-----------------~p~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~ 70 (593)
+++| +|..+++ +++|++|+|++|+|++. +|+.++ ++++|++|+|++|++.+.+|..|+.
T Consensus 194 ~l~~-ip~~l~~-l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~ 271 (636)
T 4eco_A 194 NITF-VSKAVMR-LTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKA 271 (636)
T ss_dssp EEEE-ECGGGGG-CTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTT
T ss_pred CCcc-CCHHHhc-ccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhc
Confidence 4454 7777765 78888888888888864 777777 8888888888888887788888888
Q ss_pred CCCchhhhhhcceeeccCCc-ccc-cCCC----c------ccccEEEccCCcccCcCCC--CCCCCCCCCEecCCCccCC
Q 007680 71 LRHLSVLSLLMFGIRLTGNK-LYG-RIPP----C------LVLTVLDVSRNQLSGDIPS--TIGGRVDLETLSLASNQFQ 136 (593)
Q Consensus 71 l~~L~~L~l~~n~l~l~~n~-l~~-~~~~----~------~~L~~L~l~~N~l~~~~p~--~~~~l~~L~~L~l~~N~l~ 136 (593)
+++|++| ++++|+ +++ .+|. + ..|++|++++|+++ .+|. .++++++|+.|++++|+++
T Consensus 272 l~~L~~L-------~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~ 343 (636)
T 4eco_A 272 LPEMQLI-------NVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLE 343 (636)
T ss_dssp CSSCCEE-------ECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCE
T ss_pred CCCCCEE-------ECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCc
Confidence 8888888 666666 655 4442 1 45777777777777 6666 6777777777777777777
Q ss_pred CCCCccccCCccccccccccccccCCCCCCCCCCC
Q 007680 137 GPIPESVGSLISLESLDLSGNNLSGKIPKLEGEIP 171 (593)
Q Consensus 137 ~~~p~~l~~~~~L~~L~l~~N~l~~~~p~~~~~~~ 171 (593)
|.+| .+..+++|+.|++++|+++ .+|..+..++
T Consensus 344 g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~ 376 (636)
T 4eco_A 344 GKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFT 376 (636)
T ss_dssp EECC-CCEEEEEESEEECCSSEEE-ECCTTSEEEC
T ss_pred cchh-hhCCCCCCCEEECCCCccc-cccHhhhhhc
Confidence 6677 6777777777777777777 4444444433
No 311
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.76 E-value=2.6e-18 Score=189.85 Aligned_cols=130 Identities=25% Similarity=0.303 Sum_probs=108.1
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhh
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLL 80 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 80 (593)
|+.|++++|.+. .+|..++..+++|++|+|++|.|++..|..|..+++|+.|+|++|.|++.+|..|+.+++|++|
T Consensus 53 l~~l~l~~~~l~-~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L--- 128 (597)
T 3oja_B 53 QKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL--- 128 (597)
T ss_dssp CSEEEESSCEES-EECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE---
T ss_pred ceEEEeeCCCCC-CcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEE---
Confidence 467899999998 7888877678999999999999998777889999999999999999998888888999999999
Q ss_pred cceeeccCCcccccC----CCcccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCC
Q 007680 81 MFGIRLTGNKLYGRI----PPCLVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGP 138 (593)
Q Consensus 81 ~n~l~l~~n~l~~~~----~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 138 (593)
++++|.+.+.. ..+..|++|+|++|.+++.+|..|+++++|+.|+|++|++++.
T Consensus 129 ----~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 186 (597)
T 3oja_B 129 ----VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV 186 (597)
T ss_dssp ----ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBC
T ss_pred ----EeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCc
Confidence 77777776332 3344688999999998887888888888888888888888754
No 312
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.76 E-value=1.4e-18 Score=162.93 Aligned_cols=129 Identities=28% Similarity=0.344 Sum_probs=92.6
Q ss_pred cEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCc-cCCCCCCCcEEEccCCcccccccccccCCCCchhhhhh
Q 007680 2 RILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPN-SITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLL 80 (593)
Q Consensus 2 ~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 80 (593)
++|++++|+++ .+|..++. +|++|+|++|+|++..+. .|.++++|+.|+|++|+|++..|..|..+++|++|
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~---~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L--- 83 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL---HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQEL--- 83 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT---TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEE---
T ss_pred CEEEcCCCCcC-cCccCCCC---CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEE---
Confidence 57899999998 89987653 899999999999966664 48899999999999999998888888888887766
Q ss_pred cceeeccCCcccccCCCcccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCCCCccccCCcccccccccccccc
Q 007680 81 MFGIRLTGNKLYGRIPPCLVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIPESVGSLISLESLDLSGNNLS 160 (593)
Q Consensus 81 ~n~l~l~~n~l~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~l~~N~l~ 160 (593)
++++| +|++..|..|.++++|+.|+|++|+|++..|..+..+++|+.|++++|+|+
T Consensus 84 ----~Ls~N--------------------~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 139 (192)
T 1w8a_A 84 ----QLGEN--------------------KIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFN 139 (192)
T ss_dssp ----ECCSC--------------------CCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBC
T ss_pred ----ECCCC--------------------cCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCcc
Confidence 44444 444444444555555555555555555555555555555555555555555
Q ss_pred C
Q 007680 161 G 161 (593)
Q Consensus 161 ~ 161 (593)
+
T Consensus 140 c 140 (192)
T 1w8a_A 140 C 140 (192)
T ss_dssp C
T ss_pred C
Confidence 4
No 313
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.75 E-value=2.1e-18 Score=189.44 Aligned_cols=178 Identities=20% Similarity=0.208 Sum_probs=132.5
Q ss_pred CcEEEeeCccccccC--ChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCccccccc-ccccCCCCchhh
Q 007680 1 MRILTLEGNQLSGRL--PSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHIL-NTFGNLRHLSVL 77 (593)
Q Consensus 1 L~~L~Ls~n~l~~~l--p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L 77 (593)
|+.|+|++|++++.. |..+.. +++|++|+|++|++++. |..|.++++|+.|+|++|.+++..| ..|..+++|++|
T Consensus 349 L~~L~l~~n~l~~~~~~~~~~~~-~~~L~~L~l~~n~l~~~-~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L 426 (570)
T 2z63_A 349 LEFLDLSRNGLSFKGCCSQSDFG-TTSLKYLDLSFNGVITM-SSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYL 426 (570)
T ss_dssp CCEEECCSSCCBEEEEEEHHHHT-CSCCCEEECCSCSEEEE-EEEEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEE
T ss_pred CCEEeCcCCccCccccccccccc-cCccCEEECCCCccccc-cccccccCCCCEEEccCCccccccchhhhhcCCCCCEE
Confidence 567777777776321 455553 77888888888887744 4447778888888888888876655 467778888887
Q ss_pred hhhcceeeccCCcccccCC----CcccccEEEccCCccc-CcCCCCCCCCCCCCEecCCCccCCCCCCccccCCcccccc
Q 007680 78 SLLMFGIRLTGNKLYGRIP----PCLVLTVLDVSRNQLS-GDIPSTIGGRVDLETLSLASNQFQGPIPESVGSLISLESL 152 (593)
Q Consensus 78 ~l~~n~l~l~~n~l~~~~~----~~~~L~~L~l~~N~l~-~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L 152 (593)
++++|.+.+.++ .+..|++|++++|.++ +.+|..+..+++|+.|++++|++++..|..+..+++|+.|
T Consensus 427 -------~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 499 (570)
T 2z63_A 427 -------DISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVL 499 (570)
T ss_dssp -------ECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred -------eCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEE
Confidence 667777665433 3456889999999887 5688888889999999999999987778888888999999
Q ss_pred ccccccccCCCCCCCCCCCCCCCccCCCcccccCCccCCCC
Q 007680 153 DLSGNNLSGKIPKLEGEIPVKGSFKNFSTESFFGNYALCGP 193 (593)
Q Consensus 153 ~l~~N~l~~~~p~~~~~~~~~~~~~~~~~~~~~~n~~~c~~ 193 (593)
++++|++++.+|..+..++. +....+.+|+..|.-
T Consensus 500 ~l~~n~l~~~~~~~~~~l~~------L~~L~l~~N~~~~~~ 534 (570)
T 2z63_A 500 NMASNQLKSVPDGIFDRLTS------LQKIWLHTNPWDCSC 534 (570)
T ss_dssp ECCSSCCSCCCTTTTTTCTT------CCEEECCSSCBCCCT
T ss_pred eCCCCcCCCCCHHHhhcccC------CcEEEecCCcccCCC
Confidence 99999998887776655543 445577888877643
No 314
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.75 E-value=6.2e-18 Score=172.74 Aligned_cols=165 Identities=20% Similarity=0.261 Sum_probs=111.1
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhh
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLL 80 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 80 (593)
|+.+++++|+++ .+|..++ ++|+.|+|++|+|++..|+.|.++++|+.|+|++|++++..|..|+.+++|++|+|+
T Consensus 35 l~~l~~~~~~l~-~ip~~~~---~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 35 LRVVQCSDLGLK-AVPKEIS---PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp TTEEECCSSCCS-SCCSCCC---TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred CCEEECCCCCcc-ccCCCCC---CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 578999999999 8998764 599999999999998878899999999999999999998889999999999999555
Q ss_pred cce--------------eeccCCccccc----CCCcccccEEEccCCccc--CcCCCCCCCCCCCCEecCCCccCCCCCC
Q 007680 81 MFG--------------IRLTGNKLYGR----IPPCLVLTVLDVSRNQLS--GDIPSTIGGRVDLETLSLASNQFQGPIP 140 (593)
Q Consensus 81 ~n~--------------l~l~~n~l~~~----~~~~~~L~~L~l~~N~l~--~~~p~~~~~l~~L~~L~l~~N~l~~~~p 140 (593)
+|. +++++|++.+. +..+..|++|++++|.++ +..|..+..+ +|+.|++++|+++ .+|
T Consensus 111 ~n~l~~l~~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~-~l~ 188 (332)
T 2ft3_A 111 KNHLVEIPPNLPSSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLT-GIP 188 (332)
T ss_dssp SSCCCSCCSSCCTTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCS-SCC
T ss_pred CCcCCccCccccccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCC-ccC
Confidence 443 22334444321 112223455555555443 2334444443 3444444444443 233
Q ss_pred ccccCCccccccccccccccCCCCCCCCCCCCC
Q 007680 141 ESVGSLISLESLDLSGNNLSGKIPKLEGEIPVK 173 (593)
Q Consensus 141 ~~l~~~~~L~~L~l~~N~l~~~~p~~~~~~~~~ 173 (593)
..+. ++|+.|++++|++++..|..+..++.+
T Consensus 189 ~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L 219 (332)
T 2ft3_A 189 KDLP--ETLNELHLDHNKIQAIELEDLLRYSKL 219 (332)
T ss_dssp SSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTC
T ss_pred cccc--CCCCEEECCCCcCCccCHHHhcCCCCC
Confidence 3222 467777777777777766666555443
No 315
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.75 E-value=9.2e-18 Score=160.87 Aligned_cols=150 Identities=19% Similarity=0.190 Sum_probs=129.8
Q ss_pred CcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhhcceeeccCCccccc----CCCcccc
Q 007680 26 IEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLLMFGIRLTGNKLYGR----IPPCLVL 101 (593)
Q Consensus 26 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~l~~n~l~~~----~~~~~~L 101 (593)
-+.+++++|.|+ .+|..+. ++|+.|+|++|+|++..+..|..+++|+.| ++++|++.+. +..+..|
T Consensus 13 ~~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L-------~Ls~N~i~~~~~~~~~~l~~L 82 (220)
T 2v9t_B 13 NNIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRI-------DLSNNQISELAPDAFQGLRSL 82 (220)
T ss_dssp TTEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEE-------ECCSSCCCEECTTTTTTCSSC
T ss_pred CCEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEE-------ECCCCcCCCcCHHHhhCCcCC
Confidence 368999999999 6787765 789999999999998778899999999999 7888888743 4455679
Q ss_pred cEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCCCCccccCCccccccccccccccCCCCCCCCCCCCCCCccCCCc
Q 007680 102 TVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIPESVGSLISLESLDLSGNNLSGKIPKLEGEIPVKGSFKNFST 181 (593)
Q Consensus 102 ~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~~~ 181 (593)
++|+|++|+|++..+..|.++++|+.|+|++|+|++..|..|..+++|+.|+|++|++++..+..+..++. +..
T Consensus 83 ~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~------L~~ 156 (220)
T 2v9t_B 83 NSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRA------IQT 156 (220)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTT------CCE
T ss_pred CEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCC------CCE
Confidence 99999999999766677899999999999999999888999999999999999999999988887765543 445
Q ss_pred ccccCCccCC
Q 007680 182 ESFFGNYALC 191 (593)
Q Consensus 182 ~~~~~n~~~c 191 (593)
..+.+|++.|
T Consensus 157 L~L~~N~~~c 166 (220)
T 2v9t_B 157 MHLAQNPFIC 166 (220)
T ss_dssp EECCSSCEEC
T ss_pred EEeCCCCcCC
Confidence 6788998877
No 316
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.75 E-value=5.6e-19 Score=196.45 Aligned_cols=173 Identities=20% Similarity=0.344 Sum_probs=146.4
Q ss_pred CcEEEeeCcccccc-----------------CChhhh--hCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCc-c
Q 007680 1 MRILTLEGNQLSGR-----------------LPSTIG--HSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNS-F 60 (593)
Q Consensus 1 L~~L~Ls~n~l~~~-----------------lp~~~~--~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l 60 (593)
|++|+|++|++++. +|..++ . +++|++|+|++|++.+.+|+.|+++++|+.|+|++|+ +
T Consensus 208 L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~-l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l 286 (636)
T 4eco_A 208 LRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDN-LKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGI 286 (636)
T ss_dssp CCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGG-CTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTS
T ss_pred CCEEECcCCccccccccccccccccchhcccCchhhhhcc-cCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCC
Confidence 78999999999964 999987 6 9999999999999999999999999999999999999 9
Q ss_pred cc-cccccccCC------CCchhhhhhcceeeccCCcccccCCC------cccccEEEccCCcccCcCCCCCCCCCCCCE
Q 007680 61 SG-HILNTFGNL------RHLSVLSLLMFGIRLTGNKLYGRIPP------CLVLTVLDVSRNQLSGDIPSTIGGRVDLET 127 (593)
Q Consensus 61 ~~-~~p~~~~~l------~~L~~L~l~~n~l~l~~n~l~~~~~~------~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~ 127 (593)
++ .+|..++.+ ++|++| ++++|+++ .+|. +..|++|++++|+++|.+| .|+++++|+.
T Consensus 287 ~~~~lp~~~~~L~~~~~l~~L~~L-------~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~ 357 (636)
T 4eco_A 287 SGEQLKDDWQALADAPVGEKIQII-------YIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLAS 357 (636)
T ss_dssp CHHHHHHHHHHHHHSGGGGTCCEE-------ECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESE
T ss_pred ccccchHHHHhhhccccCCCCCEE-------ECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCE
Confidence 98 899988886 899999 77888887 5554 4459999999999998899 8999999999
Q ss_pred ecCCCccCCCCCCccccCCcc-ccccccccccccCCCCCCCCCCCCCCCccCCCcccccCCcc
Q 007680 128 LSLASNQFQGPIPESVGSLIS-LESLDLSGNNLSGKIPKLEGEIPVKGSFKNFSTESFFGNYA 189 (593)
Q Consensus 128 L~l~~N~l~~~~p~~l~~~~~-L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~~~~~~~~n~~ 189 (593)
|++++|+++ .+|..+..+++ |+.|++++|+++ .+|..+.... +.++....+.+|..
T Consensus 358 L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~----l~~L~~L~Ls~N~l 414 (636)
T 4eco_A 358 LNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKS----VSVMSAIDFSYNEI 414 (636)
T ss_dssp EECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTC----SSCEEEEECCSSCT
T ss_pred EECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcc----cCccCEEECcCCcC
Confidence 999999998 78888999999 999999999999 5566543322 22344445555543
No 317
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.74 E-value=2.5e-18 Score=190.35 Aligned_cols=174 Identities=18% Similarity=0.104 Sum_probs=143.1
Q ss_pred CcEEEeeCcccccc--CChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCccccccc-ccccCCCCchhh
Q 007680 1 MRILTLEGNQLSGR--LPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHIL-NTFGNLRHLSVL 77 (593)
Q Consensus 1 L~~L~Ls~n~l~~~--lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L 77 (593)
|+.|+|++|++++. +|..+.. +++|++|+|++|.++ .+|..|.++++|+.|+|++|++++..| ..|..+++|++|
T Consensus 352 L~~L~ls~n~l~~~~~~~~~~~~-~~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L 429 (606)
T 3vq2_A 352 LSYLDLSRNALSFSGCCSYSDLG-TNSLRHLDLSFNGAI-IMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYL 429 (606)
T ss_dssp CCEEECCSSCEEEEEECCHHHHC-CSCCCEEECCSCSEE-EECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEE
T ss_pred CCEEECcCCccCCCcchhhhhcc-CCcccEeECCCCccc-cchhhccCCCCCCeeECCCCccCCccChhhhhccccCCEE
Confidence 67888999988843 2666664 899999999999998 477889999999999999999997777 678899999999
Q ss_pred hhhcceeeccCCcccccCC----CcccccEEEccCCcccC-cCCCCCCCCCCCCEecCCCccCCCCCCccccCCcccccc
Q 007680 78 SLLMFGIRLTGNKLYGRIP----PCLVLTVLDVSRNQLSG-DIPSTIGGRVDLETLSLASNQFQGPIPESVGSLISLESL 152 (593)
Q Consensus 78 ~l~~n~l~l~~n~l~~~~~----~~~~L~~L~l~~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L 152 (593)
++++|++.+.+| .+.+|++|++++|++++ .+|..|+++++|+.|++++|++++..|..+.++++|+.|
T Consensus 430 -------~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 502 (606)
T 3vq2_A 430 -------DISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLL 502 (606)
T ss_dssp -------ECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred -------ECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEE
Confidence 777888775444 44569999999999987 478889999999999999999998888899999999999
Q ss_pred ccccccccCCCCCCCCCCCCCCCccCCCcccccCCcc
Q 007680 153 DLSGNNLSGKIPKLEGEIPVKGSFKNFSTESFFGNYA 189 (593)
Q Consensus 153 ~l~~N~l~~~~p~~~~~~~~~~~~~~~~~~~~~~n~~ 189 (593)
++++|++++..|..+..++.+. .....+|..
T Consensus 503 ~Ls~N~l~~~~~~~~~~l~~L~------~L~l~~N~l 533 (606)
T 3vq2_A 503 NMSHNNLLFLDSSHYNQLYSLS------TLDCSFNRI 533 (606)
T ss_dssp ECCSSCCSCEEGGGTTTCTTCC------EEECTTSCC
T ss_pred ECCCCcCCCcCHHHccCCCcCC------EEECCCCcC
Confidence 9999999998888777665443 345556643
No 318
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.74 E-value=3.1e-18 Score=194.71 Aligned_cols=144 Identities=17% Similarity=0.268 Sum_probs=93.4
Q ss_pred CChhhhhCCCCCcEEECCCCcCcc-----------------cCCccCC--CCCCCcEEEccCCcccccccccccCCCCch
Q 007680 15 LPSTIGHSLPNIEYLLLTANNLTG-----------------TIPNSIT--NATKLIVLDLGFNSFSGHILNTFGNLRHLS 75 (593)
Q Consensus 15 lp~~~~~~l~~L~~L~L~~N~l~~-----------------~~p~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 75 (593)
+|..+.. +++|++|+|++|+|++ .+|+.++ ++++|+.|+|++|++.+.+|..|++|++|+
T Consensus 440 IP~~l~~-L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~ 518 (876)
T 4ecn_A 440 ISKAIQR-LTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQ 518 (876)
T ss_dssp ECGGGGG-CTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCC
T ss_pred hhHHHhc-CCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCC
Confidence 6666664 7777777777777776 3677766 777777777777777777777777777777
Q ss_pred hhhhhcceeeccCCc-ccc-cCCC-----------cccccEEEccCCcccCcCCC--CCCCCCCCCEecCCCccCCCCCC
Q 007680 76 VLSLLMFGIRLTGNK-LYG-RIPP-----------CLVLTVLDVSRNQLSGDIPS--TIGGRVDLETLSLASNQFQGPIP 140 (593)
Q Consensus 76 ~L~l~~n~l~l~~n~-l~~-~~~~-----------~~~L~~L~l~~N~l~~~~p~--~~~~l~~L~~L~l~~N~l~~~~p 140 (593)
.| ++++|+ +++ .+|. +..|++|+|++|+++ .+|. .|+++++|+.|+|++|+++ .+|
T Consensus 519 ~L-------~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp 589 (876)
T 4ecn_A 519 SL-------NIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE 589 (876)
T ss_dssp EE-------ECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC
T ss_pred EE-------ECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch
Confidence 77 555555 444 2321 124666666666666 5665 5666666666666666666 555
Q ss_pred ccccCCccccccccccccccCCCCCCCCCC
Q 007680 141 ESVGSLISLESLDLSGNNLSGKIPKLEGEI 170 (593)
Q Consensus 141 ~~l~~~~~L~~L~l~~N~l~~~~p~~~~~~ 170 (593)
.|..+++|+.|+|++|+++ .+|..+..+
T Consensus 590 -~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l 617 (876)
T 4ecn_A 590 -AFGTNVKLTDLKLDYNQIE-EIPEDFCAF 617 (876)
T ss_dssp -CCCTTSEESEEECCSSCCS-CCCTTSCEE
T ss_pred -hhcCCCcceEEECcCCccc-cchHHHhhc
Confidence 6666666666666666666 444434333
No 319
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.74 E-value=3.3e-18 Score=183.91 Aligned_cols=155 Identities=25% Similarity=0.238 Sum_probs=104.6
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhh
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLL 80 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 80 (593)
|+.|+|++|.++ .+|+..+..+++|++|+|++|.|++..| |..+++|+.|+|++|.|++..+. ++|++|+|+
T Consensus 36 L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~~-----~~L~~L~L~ 107 (487)
T 3oja_A 36 VKELDLSGNPLS-QISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVG-----PSIETLHAA 107 (487)
T ss_dssp CCEEECCSSCCC-CCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEEC-----TTCCEEECC
T ss_pred ccEEEeeCCcCC-CCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCCC-----CCcCEEECc
Confidence 678999999999 4554433459999999999999997665 88999999998888888753321 445555544
Q ss_pred cce--------------eeccCCcccccCCC----cccccEEEccCCcccCcCCCCCC-CCCCCCEecCCCccCCCCCCc
Q 007680 81 MFG--------------IRLTGNKLYGRIPP----CLVLTVLDVSRNQLSGDIPSTIG-GRVDLETLSLASNQFQGPIPE 141 (593)
Q Consensus 81 ~n~--------------l~l~~n~l~~~~~~----~~~L~~L~l~~N~l~~~~p~~~~-~l~~L~~L~l~~N~l~~~~p~ 141 (593)
+|. +++++|.+++..|. +..|++|+|++|.+++.+|..+. .+++|+.|+|++|+|++. |.
T Consensus 108 ~N~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~~ 186 (487)
T 3oja_A 108 NNNISRVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG 186 (487)
T ss_dssp SSCCCCEEECCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC
T ss_pred CCcCCCCCccccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc-cc
Confidence 332 35667776654332 33477777777777766666664 566777777777777643 22
Q ss_pred cccCCccccccccccccccCCCCC
Q 007680 142 SVGSLISLESLDLSGNNLSGKIPK 165 (593)
Q Consensus 142 ~l~~~~~L~~L~l~~N~l~~~~p~ 165 (593)
+..+++|+.|+|++|++++.+|.
T Consensus 187 -~~~l~~L~~L~Ls~N~l~~~~~~ 209 (487)
T 3oja_A 187 -QVVFAKLKTLDLSSNKLAFMGPE 209 (487)
T ss_dssp -CCCCTTCCEEECCSSCCCEECGG
T ss_pred -cccCCCCCEEECCCCCCCCCCHh
Confidence 23466677777777777665544
No 320
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.74 E-value=6.7e-18 Score=186.89 Aligned_cols=153 Identities=21% Similarity=0.276 Sum_probs=86.4
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCcc-CCCCCCCcEEEccCCcccccc--cccccCCCCchhh
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNS-ITNATKLIVLDLGFNSFSGHI--LNTFGNLRHLSVL 77 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~~--p~~~~~l~~L~~L 77 (593)
|++|+|++|++.+..|..+. .+++|++|+|++|.+.+.+|.. |.++++|+.|+|++|.+++.. |..+..+++|++|
T Consensus 303 L~~L~l~~n~l~~~~~~~~~-~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L 381 (606)
T 3t6q_A 303 LKKLVLSANKFENLCQISAS-NFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSL 381 (606)
T ss_dssp CCEEECTTCCCSBGGGGCGG-GCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEE
T ss_pred CCEEECccCCcCcCchhhhh-ccCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEE
Confidence 56777777777733344444 3777777777777776555543 667777777777777776544 5566677777776
Q ss_pred hhhcceeeccCCccccc----CCCcccccEEEccCCcccCcCCCC-CCCCCCCCEecCCCccCCCCCCccccCCcccccc
Q 007680 78 SLLMFGIRLTGNKLYGR----IPPCLVLTVLDVSRNQLSGDIPST-IGGRVDLETLSLASNQFQGPIPESVGSLISLESL 152 (593)
Q Consensus 78 ~l~~n~l~l~~n~l~~~----~~~~~~L~~L~l~~N~l~~~~p~~-~~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L 152 (593)
++++|++.+. +..+..|++|++++|++++..|.. +.++++|+.|++++|++++..|..+..+++|+.|
T Consensus 382 -------~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 454 (606)
T 3t6q_A 382 -------NLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHL 454 (606)
T ss_dssp -------ECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEE
T ss_pred -------ECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEE
Confidence 4444444322 222233555555555554443322 4455555555555555554445555555555555
Q ss_pred ccccccccC
Q 007680 153 DLSGNNLSG 161 (593)
Q Consensus 153 ~l~~N~l~~ 161 (593)
++++|++++
T Consensus 455 ~L~~n~l~~ 463 (606)
T 3t6q_A 455 NLQGNHFPK 463 (606)
T ss_dssp ECTTCBCGG
T ss_pred ECCCCCCCc
Confidence 555555544
No 321
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.74 E-value=6.4e-18 Score=158.47 Aligned_cols=128 Identities=27% Similarity=0.349 Sum_probs=106.7
Q ss_pred cEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhhc
Q 007680 2 RILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLLM 81 (593)
Q Consensus 2 ~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~ 81 (593)
+++++++|+|+ .+|..++ ++|++|+|++|+|+ .+|..|.++++|+.|+|++|+|++..+..|..+++|+
T Consensus 13 ~~l~~~~~~l~-~ip~~~~---~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~------ 81 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP---RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLL------ 81 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC---TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCC------
T ss_pred CEEEcCCCCCC-cCCCCCC---CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCC------
Confidence 46889999998 8887654 58899999999998 7788899999999999999999977777777766665
Q ss_pred ceeeccCCcccccCCCcccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCCCCccccCCccccccccccccccC
Q 007680 82 FGIRLTGNKLYGRIPPCLVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIPESVGSLISLESLDLSGNNLSG 161 (593)
Q Consensus 82 n~l~l~~n~l~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~l~~N~l~~ 161 (593)
+|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|++++|++..
T Consensus 82 ---------------------~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 82 ---------------------TLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp ---------------------EEECCSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred ---------------------EEECCCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 45777777877777789999999999999999986666678889999999999999874
No 322
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.73 E-value=1.1e-17 Score=160.43 Aligned_cols=131 Identities=21% Similarity=0.217 Sum_probs=115.7
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhh
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLL 80 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 80 (593)
++.|+|++|+|++..|...+..+++|++|+|++|+|++..+..|.++++|+.|+|++|+|++..|..|..+++|++|
T Consensus 34 ~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L--- 110 (220)
T 2v70_A 34 TAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTL--- 110 (220)
T ss_dssp CSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEE---
T ss_pred CCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEE---
Confidence 47899999999944355655569999999999999998888899999999999999999998888889999999999
Q ss_pred cceeeccCCcccccC----CCcccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCC
Q 007680 81 MFGIRLTGNKLYGRI----PPCLVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGP 138 (593)
Q Consensus 81 ~n~l~l~~n~l~~~~----~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 138 (593)
++++|++.+.. ..+..|++|+|++|+|++..|..|..+++|+.|+|++|++...
T Consensus 111 ----~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 168 (220)
T 2v70_A 111 ----MLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCN 168 (220)
T ss_dssp ----ECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECS
T ss_pred ----ECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCC
Confidence 88888887543 3455699999999999988899999999999999999999853
No 323
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.73 E-value=1.1e-17 Score=182.93 Aligned_cols=178 Identities=20% Similarity=0.249 Sum_probs=122.4
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCC---ccCCCCCCCcEEEccCCccccccc--ccccCCCCch
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIP---NSITNATKLIVLDLGFNSFSGHIL--NTFGNLRHLS 75 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~L~L~~N~l~~~~p--~~~~~l~~L~ 75 (593)
|+.|+|++|++. .+|..++..+++|++|+|++|+|++..| ..++.+++|+.|+|++|++++..+ ..+..+++|+
T Consensus 312 L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~ 390 (549)
T 2z81_A 312 VKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLT 390 (549)
T ss_dssp CCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCC
T ss_pred ceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCC
Confidence 567888888887 7888876558888888888888887664 346778888888888888875433 4577788888
Q ss_pred hhhhhcce----------------eeccCCcccccCCCc--ccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCC
Q 007680 76 VLSLLMFG----------------IRLTGNKLYGRIPPC--LVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQG 137 (593)
Q Consensus 76 ~L~l~~n~----------------l~l~~n~l~~~~~~~--~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 137 (593)
+|+|++|. +++++|++. .++.. ..|++|++++|+|++.+ .++++|++|+|++|+|+
T Consensus 391 ~L~Ls~N~l~~lp~~~~~~~~L~~L~Ls~N~l~-~l~~~~~~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~- 464 (549)
T 2z81_A 391 SLDISRNTFHPMPDSCQWPEKMRFLNLSSTGIR-VVKTCIPQTLEVLDVSNNNLDSFS----LFLPRLQELYISRNKLK- 464 (549)
T ss_dssp EEECTTCCCCCCCSCCCCCTTCCEEECTTSCCS-CCCTTSCTTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCS-
T ss_pred EEECCCCCCccCChhhcccccccEEECCCCCcc-cccchhcCCceEEECCCCChhhhc----ccCChhcEEECCCCccC-
Confidence 88444432 234444443 12221 23566666666665422 46788888889999888
Q ss_pred CCCccccCCccccccccccccccCCCCCCCCCCCCCCCccCCCcccccCCccCCC
Q 007680 138 PIPESVGSLISLESLDLSGNNLSGKIPKLEGEIPVKGSFKNFSTESFFGNYALCG 192 (593)
Q Consensus 138 ~~p~~l~~~~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~~~~~~~~n~~~c~ 192 (593)
.+|. ...+++|+.|++++|++++.+|..+..++ .+......+|++.|.
T Consensus 465 ~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~------~L~~L~l~~N~~~~~ 512 (549)
T 2z81_A 465 TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLT------SLQKIWLHTNPWDCS 512 (549)
T ss_dssp SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCT------TCCEEECCSSCBCCC
T ss_pred cCCC-cccCccCCEEecCCCccCCcCHHHHhcCc------ccCEEEecCCCccCC
Confidence 6675 46788889999999999888877665554 344557778877663
No 324
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.73 E-value=1.1e-17 Score=169.10 Aligned_cols=145 Identities=23% Similarity=0.333 Sum_probs=83.6
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhh
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLL 80 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 80 (593)
|+.|+|++|++. .+| .+.. +++|++|+|++|+|++. +. +.++++|+.|+|++|++++ ++ .+..+++|++|
T Consensus 43 L~~L~l~~~~i~-~l~-~~~~-l~~L~~L~L~~n~i~~~-~~-~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L--- 112 (308)
T 1h6u_A 43 ITTLSAFGTGVT-TIE-GVQY-LNNLIGLELKDNQITDL-AP-LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTL--- 112 (308)
T ss_dssp CCEEECTTSCCC-CCT-TGGG-CTTCCEEECCSSCCCCC-GG-GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEE---
T ss_pred cCEEEeeCCCcc-Cch-hhhc-cCCCCEEEccCCcCCCC-hh-HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEE---
Confidence 466777777776 565 3443 67777777777777743 33 6677777777777777764 33 46667777776
Q ss_pred cceeeccCCcccc--cCCCcccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCCCCccccCCcccccccccccc
Q 007680 81 MFGIRLTGNKLYG--RIPPCLVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIPESVGSLISLESLDLSGNN 158 (593)
Q Consensus 81 ~n~l~l~~n~l~~--~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~l~~N~ 158 (593)
++++|++.+ .+..+..|++|++++|++++..+ +..+++|+.|++++|++++ ++. +..+++|+.|++++|+
T Consensus 113 ----~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~ 184 (308)
T 1h6u_A 113 ----DLTSTQITDVTPLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSD-LTP-LANLSKLTTLKADDNK 184 (308)
T ss_dssp ----ECTTSCCCCCGGGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSC
T ss_pred ----ECCCCCCCCchhhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCC-Chh-hcCCCCCCEEECCCCc
Confidence 444444442 12333345566666665553222 5555555566666655553 332 5555555555555555
Q ss_pred ccCCC
Q 007680 159 LSGKI 163 (593)
Q Consensus 159 l~~~~ 163 (593)
+++..
T Consensus 185 l~~~~ 189 (308)
T 1h6u_A 185 ISDIS 189 (308)
T ss_dssp CCCCG
T ss_pred cCcCh
Confidence 55443
No 325
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.73 E-value=4.7e-18 Score=190.80 Aligned_cols=164 Identities=27% Similarity=0.258 Sum_probs=119.7
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhh
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLL 80 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 80 (593)
|++|+|++|+++ .+|...+..+++|++|+|++|+|++..|+.|.++++|+.|+|++|++++..+..|+.+++|++|
T Consensus 27 l~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L--- 102 (680)
T 1ziw_A 27 ITVLNLTHNQLR-RLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTEL--- 102 (680)
T ss_dssp CSEEECCSSCCC-CCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEE---
T ss_pred CcEEECCCCCCC-CcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEE---
Confidence 567888888887 5665544457888888888888887777778888888888888888875555568888888888
Q ss_pred cceeeccCCccccc----CCCcccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCCCCcccc--CCcccccccc
Q 007680 81 MFGIRLTGNKLYGR----IPPCLVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIPESVG--SLISLESLDL 154 (593)
Q Consensus 81 ~n~l~l~~n~l~~~----~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~--~~~~L~~L~l 154 (593)
++++|++.+. +..+..|++|++++|.+++..|..++++++|+.|++++|++++..+..+. .+++|+.|++
T Consensus 103 ----~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L 178 (680)
T 1ziw_A 103 ----HLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLEL 178 (680)
T ss_dssp ----ECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEEC
T ss_pred ----ECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEEC
Confidence 6666666532 33445688888888888877777788888888888888888766555543 4577888888
Q ss_pred ccccccCCCCCCCCCCCC
Q 007680 155 SGNNLSGKIPKLEGEIPV 172 (593)
Q Consensus 155 ~~N~l~~~~p~~~~~~~~ 172 (593)
++|++++..|..+..++.
T Consensus 179 ~~n~l~~~~~~~~~~l~~ 196 (680)
T 1ziw_A 179 SSNQIKEFSPGCFHAIGR 196 (680)
T ss_dssp TTCCCCCBCTTGGGGSSE
T ss_pred CCCcccccChhhhhhhhh
Confidence 888888877776655543
No 326
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.73 E-value=3.5e-18 Score=194.28 Aligned_cols=172 Identities=21% Similarity=0.326 Sum_probs=145.0
Q ss_pred CcEEEeeCccccc-----------------cCChhhh-hCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCc-cc
Q 007680 1 MRILTLEGNQLSG-----------------RLPSTIG-HSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNS-FS 61 (593)
Q Consensus 1 L~~L~Ls~n~l~~-----------------~lp~~~~-~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~ 61 (593)
|+.|+|++|+|++ .+|..++ ..+++|++|+|++|++.+.+|..|.++++|+.|+|++|+ ++
T Consensus 450 L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~ls 529 (876)
T 4ecn_A 450 LQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGIS 529 (876)
T ss_dssp CCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSC
T ss_pred CCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcc
Confidence 7899999999996 3999885 239999999999999999999999999999999999998 99
Q ss_pred c-cccccccCCC-------CchhhhhhcceeeccCCcccccCCC------cccccEEEccCCcccCcCCCCCCCCCCCCE
Q 007680 62 G-HILNTFGNLR-------HLSVLSLLMFGIRLTGNKLYGRIPP------CLVLTVLDVSRNQLSGDIPSTIGGRVDLET 127 (593)
Q Consensus 62 ~-~~p~~~~~l~-------~L~~L~l~~n~l~l~~n~l~~~~~~------~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~ 127 (593)
+ .+|..++.++ +|+.| ++++|++. .+|. +.+|++|+|++|+++ .+| .|+.+++|+.
T Consensus 530 g~~iP~~i~~L~~~~~~l~~L~~L-------~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~ 599 (876)
T 4ecn_A 530 AAQLKADWTRLADDEDTGPKIQIF-------YMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTD 599 (876)
T ss_dssp HHHHHHHHHHHHHCTTTTTTCCEE-------ECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESE
T ss_pred cccchHHHHhhhhcccccCCccEE-------EeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceE
Confidence 8 7888777666 99999 77888877 5554 456999999999999 888 8999999999
Q ss_pred ecCCCccCCCCCCccccCCcc-ccccccccccccCCCCCCCCCCCCCCCccCCCcccccCCc
Q 007680 128 LSLASNQFQGPIPESVGSLIS-LESLDLSGNNLSGKIPKLEGEIPVKGSFKNFSTESFFGNY 188 (593)
Q Consensus 128 L~l~~N~l~~~~p~~l~~~~~-L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~~~~~~~~n~ 188 (593)
|+|++|+|+ .+|..+..+++ |+.|+|++|+++ .+|..+..++. ..+....+.+|.
T Consensus 600 L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~----~~L~~L~Ls~N~ 655 (876)
T 4ecn_A 600 LKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSV----YVMGSVDFSYNK 655 (876)
T ss_dssp EECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCS----SCEEEEECCSSC
T ss_pred EECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhcccc----CCCCEEECcCCc
Confidence 999999999 89999999999 999999999999 56665543321 123344555554
No 327
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.73 E-value=2.5e-17 Score=158.83 Aligned_cols=151 Identities=24% Similarity=0.266 Sum_probs=129.4
Q ss_pred CCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhhcceeeccCCccccc----CCCccc
Q 007680 25 NIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLLMFGIRLTGNKLYGR----IPPCLV 100 (593)
Q Consensus 25 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~l~~n~l~~~----~~~~~~ 100 (593)
+.+.+++++|.++ .+|..+. ++|+.|+|++|+|++..|..|..+++|++| ++++|++... +..+..
T Consensus 20 s~~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L-------~L~~N~l~~i~~~~~~~l~~ 89 (229)
T 3e6j_A 20 SGTTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKEL-------YLGSNQLGALPVGVFDSLTQ 89 (229)
T ss_dssp ETTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEE-------ECCSSCCCCCCTTTTTTCTT
T ss_pred eCCEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEE-------ECCCCCCCCcChhhcccCCC
Confidence 3578999999999 7887665 899999999999998889999999999999 7778887632 344556
Q ss_pred ccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCCCCccccCCccccccccccccccCCCCCCCCCCCCCCCccCCC
Q 007680 101 LTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIPESVGSLISLESLDLSGNNLSGKIPKLEGEIPVKGSFKNFS 180 (593)
Q Consensus 101 L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~~ 180 (593)
|++|+|++|+|++..+..|..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|++++..+..+..++ ++.
T Consensus 90 L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~------~L~ 162 (229)
T 3e6j_A 90 LTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLS------SLT 162 (229)
T ss_dssp CCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCT------TCC
T ss_pred cCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCC------CCC
Confidence 999999999999777777899999999999999999 7899999999999999999999988877666554 444
Q ss_pred cccccCCccCCC
Q 007680 181 TESFFGNYALCG 192 (593)
Q Consensus 181 ~~~~~~n~~~c~ 192 (593)
...+.+|+..|.
T Consensus 163 ~L~l~~N~~~c~ 174 (229)
T 3e6j_A 163 HAYLFGNPWDCE 174 (229)
T ss_dssp EEECTTSCBCTT
T ss_pred EEEeeCCCccCC
Confidence 567889988774
No 328
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.73 E-value=9.7e-18 Score=169.57 Aligned_cols=155 Identities=21% Similarity=0.271 Sum_probs=114.3
Q ss_pred CcEEEeeCccccccCC----hhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCccccc--cc--ccccCCC
Q 007680 1 MRILTLEGNQLSGRLP----STIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGH--IL--NTFGNLR 72 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp----~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~p--~~~~~l~ 72 (593)
|++|+|++|++++..| ..+. .+++|++|+|++|+|++..|..|.++++|++|+|++|++.+. ++ ..++.++
T Consensus 119 L~~L~Ls~n~i~~~~~~~~~~~~~-~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~ 197 (310)
T 4glp_A 119 LSSLRLRNVSWATGRSWLAELQQW-LKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFP 197 (310)
T ss_dssp CSSCEEESCCCSSTTSSHHHHHTT-BCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSC
T ss_pred CCEEEeecccccchhhhhHHHHhh-hccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCC
Confidence 5667777777775444 2233 377777777777777766667777777777777777776542 21 1235667
Q ss_pred Cchhhhhhcce--------------------eeccCCcccccCC----Cc---ccccEEEccCCcccCcCCCCCCCCCCC
Q 007680 73 HLSVLSLLMFG--------------------IRLTGNKLYGRIP----PC---LVLTVLDVSRNQLSGDIPSTIGGRVDL 125 (593)
Q Consensus 73 ~L~~L~l~~n~--------------------l~l~~n~l~~~~~----~~---~~L~~L~l~~N~l~~~~p~~~~~l~~L 125 (593)
+|++|+|++|. +++++|++.+..| .+ ..|++|+|++|+|+ .+|..+. ++|
T Consensus 198 ~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L 274 (310)
T 4glp_A 198 AIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKL 274 (310)
T ss_dssp CCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCC
T ss_pred CCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCC
Confidence 77777776544 4789999987643 33 36999999999999 6787774 799
Q ss_pred CEecCCCccCCCCCCccccCCccccccccccccccC
Q 007680 126 ETLSLASNQFQGPIPESVGSLISLESLDLSGNNLSG 161 (593)
Q Consensus 126 ~~L~l~~N~l~~~~p~~l~~~~~L~~L~l~~N~l~~ 161 (593)
+.|+|++|+|++ +|. +..+++|+.|++++|+|+.
T Consensus 275 ~~L~Ls~N~l~~-~~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 275 RVLDLSSNRLNR-APQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp SCEECCSCCCCS-CCC-TTSCCCCSCEECSSTTTSC
T ss_pred CEEECCCCcCCC-Cch-hhhCCCccEEECcCCCCCC
Confidence 999999999995 454 6888999999999999985
No 329
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.73 E-value=4.6e-18 Score=175.21 Aligned_cols=157 Identities=22% Similarity=0.245 Sum_probs=136.8
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhh
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLL 80 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 80 (593)
|+.|+|++|+++ .+|...+..+++|++|+|++|+|++..|..|.++++|++|+|++|++++..+..|+.+++|++|
T Consensus 54 L~~L~l~~n~i~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L--- 129 (353)
T 2z80_A 54 VKSLDLSNNRIT-YISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFL--- 129 (353)
T ss_dssp CCEEECTTSCCC-EECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEE---
T ss_pred CcEEECCCCcCc-ccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEE---
Confidence 689999999999 6777544569999999999999998888899999999999999999997666679999999999
Q ss_pred cceeeccCCcccc-----cCCCcccccEEEccCC-cccCcCCCCCCCCCCCCEecCCCccCCCCCCccccCCcccccccc
Q 007680 81 MFGIRLTGNKLYG-----RIPPCLVLTVLDVSRN-QLSGDIPSTIGGRVDLETLSLASNQFQGPIPESVGSLISLESLDL 154 (593)
Q Consensus 81 ~n~l~l~~n~l~~-----~~~~~~~L~~L~l~~N-~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~l 154 (593)
++++|++.+ .+..+..|++|++++| .+.+..|..|.++++|+.|++++|++++..|..+..+++|+.|++
T Consensus 130 ----~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l 205 (353)
T 2z80_A 130 ----NLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLIL 205 (353)
T ss_dssp ----ECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEE
T ss_pred ----ECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecC
Confidence 777777763 2334557999999999 577667788999999999999999999888999999999999999
Q ss_pred ccccccCCCCC
Q 007680 155 SGNNLSGKIPK 165 (593)
Q Consensus 155 ~~N~l~~~~p~ 165 (593)
++|+++..++.
T Consensus 206 ~~n~l~~~~~~ 216 (353)
T 2z80_A 206 HMKQHILLLEI 216 (353)
T ss_dssp ECSCSTTHHHH
T ss_pred CCCccccchhh
Confidence 99999765443
No 330
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.73 E-value=1.2e-17 Score=191.88 Aligned_cols=163 Identities=25% Similarity=0.220 Sum_probs=130.7
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccC-CccCCCCCCCcEEEccCCcccccccccccCCCCchhhhh
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTI-PNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSL 79 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 79 (593)
|+.|||++|.|++..|..+. .+++|++|+|++|.+.+.+ |++|.++++|++|+|++|.+++..|+.|+++++|++|
T Consensus 26 l~~LdLs~N~i~~i~~~~~~-~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L-- 102 (844)
T 3j0a_A 26 TERLLLSFNYIRTVTASSFP-FLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFEL-- 102 (844)
T ss_dssp CCEEEEESCCCCEECSSSCS-SCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCE--
T ss_pred cCEEECCCCcCCccChhHCc-ccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEe--
Confidence 57899999999844455554 5899999999999655455 7789999999999999999998888899999999998
Q ss_pred hcceeeccCCccccc------CCCcccccEEEccCCcccCcCC-CCCCCCCCCCEecCCCccCCCCCCccccCC--cccc
Q 007680 80 LMFGIRLTGNKLYGR------IPPCLVLTVLDVSRNQLSGDIP-STIGGRVDLETLSLASNQFQGPIPESVGSL--ISLE 150 (593)
Q Consensus 80 ~~n~l~l~~n~l~~~------~~~~~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~~l~~~--~~L~ 150 (593)
++++|.+.+. +..+.+|++|+|++|.+++..+ ..|+++++|+.|+|++|++++..|..+..+ ++|+
T Consensus 103 -----~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~ 177 (844)
T 3j0a_A 103 -----RLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLS 177 (844)
T ss_dssp -----ECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSC
T ss_pred -----eCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccc
Confidence 7777777653 3345569999999999986654 468889999999999999988888888877 7889
Q ss_pred ccccccccccCCCCCCCCCCC
Q 007680 151 SLDLSGNNLSGKIPKLEGEIP 171 (593)
Q Consensus 151 ~L~l~~N~l~~~~p~~~~~~~ 171 (593)
.|++++|++++..|..+..++
T Consensus 178 ~L~L~~n~l~~~~~~~~~~~~ 198 (844)
T 3j0a_A 178 FFSLAANSLYSRVSVDWGKCM 198 (844)
T ss_dssp CCEECCSBSCCCCCCCCCSSS
T ss_pred eEECCCCccccccccchhhcC
Confidence 999999998887776555443
No 331
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.73 E-value=1e-17 Score=183.82 Aligned_cols=156 Identities=26% Similarity=0.321 Sum_probs=139.4
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCC-ccCCCCCCCcEEEccCCcccccccccccCCCCchhhhh
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIP-NSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSL 79 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 79 (593)
|+.|+|++|.+. .+|..+. .+++|++|+|++|++++..| ..|.++++|+.|+|++|.+++..|..|..+++|++|
T Consensus 375 L~~L~l~~n~l~-~~~~~~~-~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L-- 450 (570)
T 2z63_A 375 LKYLDLSFNGVI-TMSSNFL-GLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVL-- 450 (570)
T ss_dssp CCEEECCSCSEE-EEEEEEE-TCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEE--
T ss_pred cCEEECCCCccc-ccccccc-ccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEE--
Confidence 689999999999 6777755 59999999999999997766 578999999999999999998899999999999999
Q ss_pred hcceeeccCCccc-ccCC----CcccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCCCCccccCCcccccccc
Q 007680 80 LMFGIRLTGNKLY-GRIP----PCLVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIPESVGSLISLESLDL 154 (593)
Q Consensus 80 ~~n~l~l~~n~l~-~~~~----~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~l 154 (593)
++++|++. +.+| .+..|++|++++|++++..|..|.++++|+.|++++|++++.+|..+..+++|+.|++
T Consensus 451 -----~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 525 (570)
T 2z63_A 451 -----KMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWL 525 (570)
T ss_dssp -----ECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEEC
T ss_pred -----ECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEe
Confidence 77777776 3344 4556999999999999888999999999999999999999888888999999999999
Q ss_pred ccccccCCCCC
Q 007680 155 SGNNLSGKIPK 165 (593)
Q Consensus 155 ~~N~l~~~~p~ 165 (593)
++|++++..|.
T Consensus 526 ~~N~~~~~~~~ 536 (570)
T 2z63_A 526 HTNPWDCSCPR 536 (570)
T ss_dssp CSSCBCCCTTT
T ss_pred cCCcccCCCcc
Confidence 99999987664
No 332
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.72 E-value=1.3e-17 Score=182.91 Aligned_cols=153 Identities=26% Similarity=0.386 Sum_probs=133.2
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCcCccc--CCccCCCCCCCcEEEccCCccccccc-ccccCCCCchhh
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGT--IPNSITNATKLIVLDLGFNSFSGHIL-NTFGNLRHLSVL 77 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~--~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L 77 (593)
|++|+|++|++++.+|..+.. +++|++|+|++|+|++. +|..|.++++|+.|+|++|++++.+| ..|..+++|++|
T Consensus 355 L~~L~l~~n~l~~~~~~~~~~-l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L 433 (562)
T 3a79_B 355 FTFLNFTQNVFTDSVFQGCST-LKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVL 433 (562)
T ss_dssp CCEEECCSSCCCTTTTTTCCS-CSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEE
T ss_pred ceEEECCCCccccchhhhhcc-cCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEE
Confidence 689999999999778887764 99999999999999963 35679999999999999999998455 468899999999
Q ss_pred hhhcceeeccCCcccccCCCc--ccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCCCCcc-ccCCcccccccc
Q 007680 78 SLLMFGIRLTGNKLYGRIPPC--LVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIPES-VGSLISLESLDL 154 (593)
Q Consensus 78 ~l~~n~l~l~~n~l~~~~~~~--~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-l~~~~~L~~L~l 154 (593)
++++|++++.++.. ..|++|+|++|+|+ .+|..+.++++|+.|+|++|+|+ .+|.. +..+++|+.|++
T Consensus 434 -------~l~~n~l~~~~~~~l~~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l 504 (562)
T 3a79_B 434 -------NLSSNMLTGSVFRCLPPKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWL 504 (562)
T ss_dssp -------ECCSSCCCGGGGSSCCTTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCCCEEC
T ss_pred -------ECCCCCCCcchhhhhcCcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCCEEEe
Confidence 88889888766654 36999999999999 68877779999999999999999 56655 999999999999
Q ss_pred ccccccCCC
Q 007680 155 SGNNLSGKI 163 (593)
Q Consensus 155 ~~N~l~~~~ 163 (593)
++|++++..
T Consensus 505 ~~N~~~c~c 513 (562)
T 3a79_B 505 HDNPWDCTC 513 (562)
T ss_dssp CSCCBCCCH
T ss_pred cCCCcCCCc
Confidence 999998743
No 333
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.72 E-value=6.1e-18 Score=171.64 Aligned_cols=154 Identities=25% Similarity=0.235 Sum_probs=92.9
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhh
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLL 80 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 80 (593)
|+.|+|++|+++ .++...+..+++|++|+|++|+|++..| |..+++|++|+|++|++++..+ +++|++|+++
T Consensus 36 L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~~-----~~~L~~L~l~ 107 (317)
T 3o53_A 36 VKELDLSGNPLS-QISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLHAA 107 (317)
T ss_dssp CSEEECTTSCCC-CCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEEE-----CTTCCEEECC
T ss_pred CCEEECcCCccC-cCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCccccccC-----CCCcCEEECC
Confidence 678899999998 5654444458899999999999886554 8888888888888888874321 2444444444
Q ss_pred cce--------------eeccCCcccccCC----CcccccEEEccCCcccCcCCCCCC-CCCCCCEecCCCccCCCCCCc
Q 007680 81 MFG--------------IRLTGNKLYGRIP----PCLVLTVLDVSRNQLSGDIPSTIG-GRVDLETLSLASNQFQGPIPE 141 (593)
Q Consensus 81 ~n~--------------l~l~~n~l~~~~~----~~~~L~~L~l~~N~l~~~~p~~~~-~l~~L~~L~l~~N~l~~~~p~ 141 (593)
+|. +++++|++++..+ .+..|++|++++|.+++..+..+. .+++|+.|+|++|+|++ +|.
T Consensus 108 ~n~l~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~ 186 (317)
T 3o53_A 108 NNNISRVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYD-VKG 186 (317)
T ss_dssp SSCCSEEEECCCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCE-EEC
T ss_pred CCccCCcCccccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCcc-ccc
Confidence 332 2455555553222 223466666666666654444442 45556666666666653 222
Q ss_pred cccCCccccccccccccccCCCC
Q 007680 142 SVGSLISLESLDLSGNNLSGKIP 164 (593)
Q Consensus 142 ~l~~~~~L~~L~l~~N~l~~~~p 164 (593)
...+++|+.|++++|++++.++
T Consensus 187 -~~~l~~L~~L~Ls~N~l~~l~~ 208 (317)
T 3o53_A 187 -QVVFAKLKTLDLSSNKLAFMGP 208 (317)
T ss_dssp -CCCCTTCCEEECCSSCCCEECG
T ss_pred -ccccccCCEEECCCCcCCcchh
Confidence 2235556666666666655433
No 334
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.72 E-value=1.5e-17 Score=166.64 Aligned_cols=163 Identities=25% Similarity=0.349 Sum_probs=131.0
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhh
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLL 80 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 80 (593)
|+.|++++|.+. .+|. +.. +++|++|+|++|+|++..+ +.++++|+.|+|++|++++ +| .+..+++|++|
T Consensus 48 L~~L~l~~~~i~-~~~~-~~~-l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L--- 117 (291)
T 1h6t_A 48 IDQIIANNSDIK-SVQG-IQY-LPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSL--- 117 (291)
T ss_dssp CCEEECTTSCCC-CCTT-GGG-CTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEE---
T ss_pred ccEEEccCCCcc-cChh-Hhc-CCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEE---
Confidence 688999999998 7874 554 9999999999999996544 9999999999999999995 44 39999999999
Q ss_pred cceeeccCCcccc--cCCCcccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCCCCccccCCcccccccccccc
Q 007680 81 MFGIRLTGNKLYG--RIPPCLVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIPESVGSLISLESLDLSGNN 158 (593)
Q Consensus 81 ~n~l~l~~n~l~~--~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~l~~N~ 158 (593)
++++|++.+ .+..+..|++|++++|++++. ..+..+++|+.|++++|++++..| +..+++|+.|++++|+
T Consensus 118 ----~L~~n~i~~~~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~ 189 (291)
T 1h6t_A 118 ----SLEHNGISDINGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNH 189 (291)
T ss_dssp ----ECTTSCCCCCGGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred ----ECCCCcCCCChhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCc
Confidence 777777763 234455699999999999854 468899999999999999996444 8999999999999999
Q ss_pred ccCCCCCCCCCCCCCCCccCCCcccccCCcc
Q 007680 159 LSGKIPKLEGEIPVKGSFKNFSTESFFGNYA 189 (593)
Q Consensus 159 l~~~~p~~~~~~~~~~~~~~~~~~~~~~n~~ 189 (593)
+++.. . +. .+.++......+|+.
T Consensus 190 i~~l~-~-l~------~l~~L~~L~l~~n~i 212 (291)
T 1h6t_A 190 ISDLR-A-LA------GLKNLDVLELFSQEC 212 (291)
T ss_dssp CCBCG-G-GT------TCTTCSEEEEEEEEE
T ss_pred CCCCh-h-hc------cCCCCCEEECcCCcc
Confidence 98742 2 33 334445556666654
No 335
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.72 E-value=7.5e-18 Score=182.97 Aligned_cols=152 Identities=28% Similarity=0.369 Sum_probs=134.1
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcc--cCCccCCCCCCCcEEEccCCcccccccc-cccCCCCchhh
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTG--TIPNSITNATKLIVLDLGFNSFSGHILN-TFGNLRHLSVL 77 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L 77 (593)
|++|+|++|++++.+|..+.. +++|++|+|++|+|++ .+|..|.++++|+.|+|++|++++.+|. .|..+++|++|
T Consensus 326 L~~L~Ls~n~l~~~~~~~~~~-l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L 404 (520)
T 2z7x_B 326 FLHLDFSNNLLTDTVFENCGH-LTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSL 404 (520)
T ss_dssp CCEEECCSSCCCTTTTTTCCC-CSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEE
T ss_pred ccEEEeECCccChhhhhhhcc-CCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEE
Confidence 689999999999778888865 9999999999999996 5567899999999999999999974665 58899999999
Q ss_pred hhhcceeeccCCcccccCCCc--ccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCCCCcc-ccCCcccccccc
Q 007680 78 SLLMFGIRLTGNKLYGRIPPC--LVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIPES-VGSLISLESLDL 154 (593)
Q Consensus 78 ~l~~n~l~l~~n~l~~~~~~~--~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-l~~~~~L~~L~l 154 (593)
++++|++++.+|.. ..|++|++++|+|+ .+|..+..+++|+.|+|++|+|+ .+|.. +..+++|+.|++
T Consensus 405 -------~Ls~N~l~~~~~~~l~~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l 475 (520)
T 2z7x_B 405 -------NMSSNILTDTIFRCLPPRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQKIWL 475 (520)
T ss_dssp -------ECCSSCCCGGGGGSCCTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEEC
T ss_pred -------ECcCCCCCcchhhhhcccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCC-ccCHHHhccCCcccEEEC
Confidence 88889888766554 36999999999999 78887889999999999999999 56655 999999999999
Q ss_pred ccccccCC
Q 007680 155 SGNNLSGK 162 (593)
Q Consensus 155 ~~N~l~~~ 162 (593)
++|++++.
T Consensus 476 ~~N~~~c~ 483 (520)
T 2z7x_B 476 HTNPWDCS 483 (520)
T ss_dssp CSSCBCCC
T ss_pred cCCCCccc
Confidence 99999874
No 336
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.72 E-value=1.3e-17 Score=167.10 Aligned_cols=147 Identities=27% Similarity=0.414 Sum_probs=125.6
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhh
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLL 80 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 80 (593)
|+.|+|++|+++ .++. +. .+++|++|+|++|+|++ +| .+..+++|+.|+|++|++++. +.+..+++|+.|
T Consensus 70 L~~L~L~~n~l~-~~~~-l~-~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L--- 139 (291)
T 1h6t_A 70 VTKLFLNGNKLT-DIKP-LA-NLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESL--- 139 (291)
T ss_dssp CCEEECCSSCCC-CCGG-GT-TCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEE---
T ss_pred CCEEEccCCccC-CCcc-cc-cCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEE---
Confidence 689999999999 6776 55 59999999999999995 44 499999999999999999954 469999999999
Q ss_pred cceeeccCCcccc--cCCCcccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCCCCccccCCcccccccccccc
Q 007680 81 MFGIRLTGNKLYG--RIPPCLVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIPESVGSLISLESLDLSGNN 158 (593)
Q Consensus 81 ~n~l~l~~n~l~~--~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~l~~N~ 158 (593)
++++|++.+ .+..+..|++|++++|++++..| +..+++|+.|++++|+|++ +| .+..+++|+.|++++|+
T Consensus 140 ----~l~~n~l~~~~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~-l~-~l~~l~~L~~L~l~~n~ 211 (291)
T 1h6t_A 140 ----YLGNNKITDITVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQE 211 (291)
T ss_dssp ----ECCSSCCCCCGGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEEEE
T ss_pred ----EccCCcCCcchhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCC-Ch-hhccCCCCCEEECcCCc
Confidence 777777774 34455679999999999996555 9999999999999999984 55 48999999999999999
Q ss_pred ccCCCCC
Q 007680 159 LSGKIPK 165 (593)
Q Consensus 159 l~~~~p~ 165 (593)
++..+..
T Consensus 212 i~~~~~~ 218 (291)
T 1h6t_A 212 CLNKPIN 218 (291)
T ss_dssp EECCCEE
T ss_pred ccCCccc
Confidence 9875443
No 337
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.72 E-value=1.6e-17 Score=163.66 Aligned_cols=140 Identities=26% Similarity=0.346 Sum_probs=77.8
Q ss_pred EEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhhcce
Q 007680 4 LTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLLMFG 83 (593)
Q Consensus 4 L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~ 83 (593)
++|++|.++ .++ .+.. +++|++|+|++|.|+ .+| ++..+++|+.|+|++|+|++..| |..+++|++|
T Consensus 24 l~l~~~~i~-~~~-~~~~-l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L------ 90 (263)
T 1xeu_A 24 QNLGKQSVT-DLV-SQKE-LSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL------ 90 (263)
T ss_dssp HHHTCSCTT-SEE-CHHH-HTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE------
T ss_pred HHhcCCCcc-ccc-chhh-cCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE------
Confidence 345556665 444 2332 566666666666666 344 45566666666666666664333 6666666666
Q ss_pred eeccCCcccc--cCCCcccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCCCCccccCCccccccccccccccC
Q 007680 84 IRLTGNKLYG--RIPPCLVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIPESVGSLISLESLDLSGNNLSG 161 (593)
Q Consensus 84 l~l~~n~l~~--~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~l~~N~l~~ 161 (593)
++++|++.+ .++. ..|++|++++|++++ ++ .+..+++|+.|++++|+|++ +| .+..+++|+.|++++|++++
T Consensus 91 -~L~~N~l~~l~~~~~-~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~-~~-~l~~l~~L~~L~L~~N~i~~ 164 (263)
T 1xeu_A 91 -SVNRNRLKNLNGIPS-ACLSRLFLDNNELRD-TD-SLIHLKNLEILSIRNNKLKS-IV-MLGFLSKLEVLDLHGNEITN 164 (263)
T ss_dssp -ECCSSCCSCCTTCCC-SSCCEEECCSSCCSB-SG-GGTTCTTCCEEECTTSCCCB-CG-GGGGCTTCCEEECTTSCCCB
T ss_pred -ECCCCccCCcCcccc-CcccEEEccCCccCC-Ch-hhcCcccccEEECCCCcCCC-Ch-HHccCCCCCEEECCCCcCcc
Confidence 555555542 1112 346666666666653 33 35566666666666666653 33 45566666666666666665
Q ss_pred C
Q 007680 162 K 162 (593)
Q Consensus 162 ~ 162 (593)
.
T Consensus 165 ~ 165 (263)
T 1xeu_A 165 T 165 (263)
T ss_dssp C
T ss_pred h
Confidence 4
No 338
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.72 E-value=2.6e-17 Score=166.22 Aligned_cols=163 Identities=23% Similarity=0.304 Sum_probs=134.1
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhh
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLL 80 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 80 (593)
|+.|+|++|+++ .+|. +. .+++|++|+|++|+|++ +| .+..+++|+.|+|++|++++. |. +..+++|++|
T Consensus 65 L~~L~L~~n~i~-~~~~-~~-~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L--- 134 (308)
T 1h6u_A 65 LIGLELKDNQIT-DLAP-LK-NLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITDV-TP-LAGLSNLQVL--- 134 (308)
T ss_dssp CCEEECCSSCCC-CCGG-GT-TCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCCC-GG-GTTCTTCCEE---
T ss_pred CCEEEccCCcCC-CChh-Hc-cCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEECCCCCCCCc-hh-hcCCCCCCEE---
Confidence 689999999999 7877 55 59999999999999995 44 699999999999999999964 43 9999999999
Q ss_pred cceeeccCCccccc--CCCcccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCCCCccccCCcccccccccccc
Q 007680 81 MFGIRLTGNKLYGR--IPPCLVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIPESVGSLISLESLDLSGNN 158 (593)
Q Consensus 81 ~n~l~l~~n~l~~~--~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~l~~N~ 158 (593)
++++|++.+. +..+..|++|++++|++++ ++. +..+++|+.|++++|++++ ++. +..+++|+.|++++|+
T Consensus 135 ----~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~L~~N~ 206 (308)
T 1h6u_A 135 ----YLDLNQITNISPLAGLTNLQYLSIGNAQVSD-LTP-LANLSKLTTLKADDNKISD-ISP-LASLPNLIEVHLKNNQ 206 (308)
T ss_dssp ----ECCSSCCCCCGGGGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCC-CGG-GGGCTTCCEEECTTSC
T ss_pred ----ECCCCccCcCccccCCCCccEEEccCCcCCC-Chh-hcCCCCCCEEECCCCccCc-Chh-hcCCCCCCEEEccCCc
Confidence 7778887743 3455569999999999995 444 8999999999999999985 443 8999999999999999
Q ss_pred ccCCCCCCCCCCCCCCCccCCCcccccCCcc
Q 007680 159 LSGKIPKLEGEIPVKGSFKNFSTESFFGNYA 189 (593)
Q Consensus 159 l~~~~p~~~~~~~~~~~~~~~~~~~~~~n~~ 189 (593)
+++..| +..+ .++....+.+|+.
T Consensus 207 l~~~~~--l~~l------~~L~~L~l~~N~i 229 (308)
T 1h6u_A 207 ISDVSP--LANT------SNLFIVTLTNQTI 229 (308)
T ss_dssp CCBCGG--GTTC------TTCCEEEEEEEEE
T ss_pred cCcccc--ccCC------CCCCEEEccCCee
Confidence 998663 3333 3444556667765
No 339
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.72 E-value=2.6e-18 Score=187.82 Aligned_cols=153 Identities=20% Similarity=0.202 Sum_probs=71.2
Q ss_pred EeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhhccee
Q 007680 5 TLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLLMFGI 84 (593)
Q Consensus 5 ~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~l 84 (593)
|+++|+++ .+|..++ ++|++|+|++|+|++..|.+|.++++|++|+|++|++++..|+.|+.+++|++|
T Consensus 11 ~~~~~~l~-~ip~~~~---~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L------- 79 (549)
T 2z81_A 11 DGRSRSFT-SIPSGLT---AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHL------- 79 (549)
T ss_dssp ECTTSCCS-SCCSCCC---TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEE-------
T ss_pred ECCCCccc-cccccCC---CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEE-------
Confidence 44445554 4554432 345555555555554444445555555555555555554444445555555555
Q ss_pred eccCCccccc----CCCcccccEEEccCCcccC-cCCCCCCCCCCCCEecCCCccCCCCCC-ccccCCcccccccccccc
Q 007680 85 RLTGNKLYGR----IPPCLVLTVLDVSRNQLSG-DIPSTIGGRVDLETLSLASNQFQGPIP-ESVGSLISLESLDLSGNN 158 (593)
Q Consensus 85 ~l~~n~l~~~----~~~~~~L~~L~l~~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~p-~~l~~~~~L~~L~l~~N~ 158 (593)
++++|++.+. +..+..|++|++++|++++ ..|..++++++|++|++++|++.+.+| ..+.++++|+.|++++|+
T Consensus 80 ~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~ 159 (549)
T 2z81_A 80 DLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALS 159 (549)
T ss_dssp ECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETT
T ss_pred ECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCc
Confidence 4444444422 1223335555555555543 123344455555555555554222222 344455555555555555
Q ss_pred ccCCCCCCCC
Q 007680 159 LSGKIPKLEG 168 (593)
Q Consensus 159 l~~~~p~~~~ 168 (593)
+++..|..+.
T Consensus 160 l~~~~~~~l~ 169 (549)
T 2z81_A 160 LRNYQSQSLK 169 (549)
T ss_dssp CCEECTTTTT
T ss_pred ccccChhhhh
Confidence 5544444433
No 340
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.71 E-value=3.8e-17 Score=150.90 Aligned_cols=132 Identities=22% Similarity=0.249 Sum_probs=105.9
Q ss_pred cEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhhc
Q 007680 2 RILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLLM 81 (593)
Q Consensus 2 ~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~ 81 (593)
+.+++++|+++ .+|..++ ++|++|+|++|+|++..+..|.++++|+.|+|++|+|++..+..|..+++|+
T Consensus 10 ~~l~~~~~~l~-~~p~~~~---~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~------ 79 (177)
T 2o6r_A 10 TEIRCNSKGLT-SVPTGIP---SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLT------ 79 (177)
T ss_dssp TEEECCSSCCS-SCCTTCC---TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCC------
T ss_pred CEEEecCCCCc-cCCCCCC---CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccC------
Confidence 57899999998 8886654 5899999999999977677788999999999999999966666666666654
Q ss_pred ceeeccCCcccccCCCcccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCCCCccccCCccccccccccccccC
Q 007680 82 FGIRLTGNKLYGRIPPCLVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIPESVGSLISLESLDLSGNNLSG 161 (593)
Q Consensus 82 n~l~l~~n~l~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~l~~N~l~~ 161 (593)
+|++++|+|++.++..|.++++|+.|++++|+|++..+..+..+++|+.|++++|++++
T Consensus 80 ---------------------~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 138 (177)
T 2o6r_A 80 ---------------------ILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 138 (177)
T ss_dssp ---------------------EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred ---------------------EEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeec
Confidence 55777777776666667888889999999999986666667888889999999998887
Q ss_pred CCC
Q 007680 162 KIP 164 (593)
Q Consensus 162 ~~p 164 (593)
..|
T Consensus 139 ~~~ 141 (177)
T 2o6r_A 139 SCP 141 (177)
T ss_dssp CHH
T ss_pred cCc
Confidence 554
No 341
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.71 E-value=3.1e-18 Score=173.78 Aligned_cols=165 Identities=21% Similarity=0.107 Sum_probs=109.6
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhh
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLL 80 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 80 (593)
|++|+|++|+++ .+|. .++|++|++++|+|++..+.. +++|+.|+|++|++++..|..|+.+++|++|
T Consensus 82 L~~L~Ls~n~l~-~l~~-----~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L--- 149 (317)
T 3o53_A 82 LRTLDLNNNYVQ-ELLV-----GPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYL--- 149 (317)
T ss_dssp CCEEECCSSEEE-EEEE-----CTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEE---
T ss_pred CCEEECcCCccc-cccC-----CCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEE---
Confidence 678888888887 5552 467888888888887554443 4667888888888876666677777788777
Q ss_pred cceeeccCCcccccCC-----CcccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCCCCccccCCccccccccc
Q 007680 81 MFGIRLTGNKLYGRIP-----PCLVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIPESVGSLISLESLDLS 155 (593)
Q Consensus 81 ~n~l~l~~n~l~~~~~-----~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~l~ 155 (593)
++++|++.+..+ .+..|++|++++|++++. |. ...+++|+.|+|++|+|++ +|..+..+++|+.|+++
T Consensus 150 ----~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L~ 222 (317)
T 3o53_A 150 ----DLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLR 222 (317)
T ss_dssp ----ECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECT
T ss_pred ----ECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-cc-ccccccCCEEECCCCcCCc-chhhhcccCcccEEECc
Confidence 666666664322 234577788888877743 32 3347777788888887773 45557777777888888
Q ss_pred cccccCCCCCCCCCCCCCCCccCCCcccccCCccCC
Q 007680 156 GNNLSGKIPKLEGEIPVKGSFKNFSTESFFGNYALC 191 (593)
Q Consensus 156 ~N~l~~~~p~~~~~~~~~~~~~~~~~~~~~~n~~~c 191 (593)
+|+++++ |..+..++ .+......+|+..|
T Consensus 223 ~N~l~~l-~~~~~~l~------~L~~L~l~~N~~~~ 251 (317)
T 3o53_A 223 NNKLVLI-EKALRFSQ------NLEHFDLRGNGFHC 251 (317)
T ss_dssp TSCCCEE-CTTCCCCT------TCCEEECTTCCCBH
T ss_pred CCcccch-hhHhhcCC------CCCEEEccCCCccC
Confidence 8877753 33333333 34445566666654
No 342
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.71 E-value=3.7e-18 Score=183.57 Aligned_cols=166 Identities=22% Similarity=0.121 Sum_probs=130.2
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhh
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLL 80 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 80 (593)
|++|+|++|.|+ .+|. .++|++|+|++|+|++..+. .+++|+.|+|++|.|++..|..|+.+++|+.|
T Consensus 82 L~~L~Ls~N~l~-~l~~-----~~~L~~L~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L--- 149 (487)
T 3oja_A 82 LRTLDLNNNYVQ-ELLV-----GPSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYL--- 149 (487)
T ss_dssp CCEEECCSSEEE-EEEE-----CTTCCEEECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEE---
T ss_pred CCEEEecCCcCC-CCCC-----CCCcCEEECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEE---
Confidence 688999999998 5663 37899999999999976654 35789999999999998888889999999999
Q ss_pred cceeeccCCcccccCC-----CcccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCCCCccccCCccccccccc
Q 007680 81 MFGIRLTGNKLYGRIP-----PCLVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIPESVGSLISLESLDLS 155 (593)
Q Consensus 81 ~n~l~l~~n~l~~~~~-----~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~l~ 155 (593)
++++|.+++..| .+..|++|+|++|.|++. |. +..+++|+.|+|++|+|++ +|..+..+++|+.|+++
T Consensus 150 ----~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls 222 (487)
T 3oja_A 150 ----DLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLR 222 (487)
T ss_dssp ----ECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECT
T ss_pred ----ECCCCCCCCcChHHHhhhCCcccEEecCCCccccc-cc-cccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEEec
Confidence 778888776433 345699999999999865 33 4468899999999999985 55558889999999999
Q ss_pred cccccCCCCCCCCCCCCCCCccCCCcccccCCccCCC
Q 007680 156 GNNLSGKIPKLEGEIPVKGSFKNFSTESFFGNYALCG 192 (593)
Q Consensus 156 ~N~l~~~~p~~~~~~~~~~~~~~~~~~~~~~n~~~c~ 192 (593)
+|+++++ |..+..++ .+...++.+|+..|+
T Consensus 223 ~N~l~~l-p~~l~~l~------~L~~L~l~~N~l~c~ 252 (487)
T 3oja_A 223 NNKLVLI-EKALRFSQ------NLEHFDLRGNGFHCG 252 (487)
T ss_dssp TSCCCEE-CTTCCCCT------TCCEEECTTCCBCHH
T ss_pred CCcCccc-chhhccCC------CCCEEEcCCCCCcCc
Confidence 9999974 44344333 445567788888765
No 343
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.70 E-value=2e-17 Score=170.24 Aligned_cols=170 Identities=15% Similarity=0.102 Sum_probs=129.7
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCC-ccCCCCCCCcE-EEccCCcccccccccccCCCCchhhh
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIP-NSITNATKLIV-LDLGFNSFSGHILNTFGNLRHLSVLS 78 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~-L~L~~N~l~~~~p~~~~~l~~L~~L~ 78 (593)
|+.|+|++|+|+ .||.+.+.++++|++|+|++|+|.+.+| .+|.++++|+. +.+++|+|+...|+.|..+++|++|+
T Consensus 32 l~~L~Ls~N~i~-~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~ 110 (350)
T 4ay9_X 32 AIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLL 110 (350)
T ss_dssp CSEEEEESCCCS-EECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEE
T ss_pred CCEEEccCCcCC-CcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhcccccccc
Confidence 578999999999 8998877679999999999999876665 46889988775 66778999988888999999999998
Q ss_pred hhcceee-----------------ccC-Ccccc----cCCCcc-cccEEEccCCcccCcCCCCCCCCCCCCEecCCC-cc
Q 007680 79 LLMFGIR-----------------LTG-NKLYG----RIPPCL-VLTVLDVSRNQLSGDIPSTIGGRVDLETLSLAS-NQ 134 (593)
Q Consensus 79 l~~n~l~-----------------l~~-n~l~~----~~~~~~-~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~-N~ 134 (593)
+++|.+. +.+ |++.. .+..+. .|+.|+|++|+|+. +|.......+|++|++.+ |.
T Consensus 111 l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~-i~~~~f~~~~L~~l~l~~~n~ 189 (350)
T 4ay9_X 111 ISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE-IHNSAFNGTQLDELNLSDNNN 189 (350)
T ss_dssp EEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCE-ECTTSSTTEEEEEEECTTCTT
T ss_pred ccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccC-CChhhccccchhHHhhccCCc
Confidence 8776643 222 33331 112222 37889999999984 554554567899999974 67
Q ss_pred CCCCCCccccCCccccccccccccccCCCCCCCCCCCC
Q 007680 135 FQGPIPESVGSLISLESLDLSGNNLSGKIPKLEGEIPV 172 (593)
Q Consensus 135 l~~~~p~~l~~~~~L~~L~l~~N~l~~~~p~~~~~~~~ 172 (593)
++...++.|.++++|+.||+++|+|+.+++..+..+..
T Consensus 190 l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~ 227 (350)
T 4ay9_X 190 LEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKK 227 (350)
T ss_dssp CCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCE
T ss_pred ccCCCHHHhccCcccchhhcCCCCcCccChhhhccchH
Confidence 77444567899999999999999999887776655543
No 344
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.70 E-value=7.9e-17 Score=176.92 Aligned_cols=151 Identities=28% Similarity=0.382 Sum_probs=68.6
Q ss_pred cEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhhc
Q 007680 2 RILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLLM 81 (593)
Q Consensus 2 ~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~ 81 (593)
+.|+|++|.|. .+| .+.. +++|+.|+|++|+|++..| |..+++|+.|+|++|+|++ +| .|..|++|+.|+|++
T Consensus 46 ~~L~l~~n~i~-~l~-~l~~-l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~ 118 (605)
T 1m9s_A 46 DQIIANNSDIK-SVQ-GIQY-LPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEH 118 (605)
T ss_dssp CCCBCTTCCCC-CCT-TGGG-CTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTT
T ss_pred CEEECcCCCCC-CCh-HHcc-CCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecC
Confidence 44555555554 444 2332 5555555555555553322 4455555555555555552 22 345555555551111
Q ss_pred cee---------------eccCCcccc--cCCCcccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCCCCcccc
Q 007680 82 FGI---------------RLTGNKLYG--RIPPCLVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIPESVG 144 (593)
Q Consensus 82 n~l---------------~l~~n~l~~--~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~ 144 (593)
|.+ +|++|++.+ .+..+..|+.|+|++|+|++..| +..+++|+.|+|++|+|++ +| .+.
T Consensus 119 N~l~~l~~l~~l~~L~~L~Ls~N~l~~l~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~-l~-~l~ 194 (605)
T 1m9s_A 119 NGISDINGLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD-LR-ALA 194 (605)
T ss_dssp SCCCCCGGGGGCTTCSEEECCSSCCCCCGGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB-CG-GGT
T ss_pred CCCCCCccccCCCccCEEECCCCccCCchhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCC-Ch-HHc
Confidence 110 334444432 12223335555555555553333 4455555555555555542 22 345
Q ss_pred CCccccccccccccccCCC
Q 007680 145 SLISLESLDLSGNNLSGKI 163 (593)
Q Consensus 145 ~~~~L~~L~l~~N~l~~~~ 163 (593)
.+++|+.|+|++|++++.+
T Consensus 195 ~l~~L~~L~L~~N~l~~~p 213 (605)
T 1m9s_A 195 GLKNLDVLELFSQECLNKP 213 (605)
T ss_dssp TCTTCSEEECCSEEEECCC
T ss_pred cCCCCCEEEccCCcCcCCc
Confidence 5555555555555555433
No 345
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.69 E-value=1.9e-17 Score=163.20 Aligned_cols=146 Identities=23% Similarity=0.311 Sum_probs=124.5
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhh
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLL 80 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 80 (593)
|+.|+|++|+++ .+| .+.. +++|++|+|++|+|++..| |.++++|+.|+|++|++++ +|. +.. ++|+.|
T Consensus 43 L~~L~l~~n~i~-~l~-~l~~-l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~-l~~-~~~-~~L~~L--- 111 (263)
T 1xeu_A 43 VQNFNGDNSNIQ-SLA-GMQF-FTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKN-LNG-IPS-ACLSRL--- 111 (263)
T ss_dssp CSEEECTTSCCC-CCT-TGGG-CTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSC-CTT-CCC-SSCCEE---
T ss_pred CcEEECcCCCcc-cch-HHhh-CCCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCC-cCc-ccc-CcccEE---
Confidence 689999999999 898 5664 9999999999999996544 9999999999999999995 444 333 899999
Q ss_pred cceeeccCCcccc--cCCCcccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCCCCccccCCcccccccccccc
Q 007680 81 MFGIRLTGNKLYG--RIPPCLVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIPESVGSLISLESLDLSGNN 158 (593)
Q Consensus 81 ~n~l~l~~n~l~~--~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~l~~N~ 158 (593)
++++|++++ .+..+.+|++|++++|+|++ +| .+..+++|+.|++++|++++. ..+..+++|+.|++++|+
T Consensus 112 ----~L~~N~l~~~~~l~~l~~L~~L~Ls~N~i~~-~~-~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~ 183 (263)
T 1xeu_A 112 ----FLDNNELRDTDSLIHLKNLEILSIRNNKLKS-IV-MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQK 183 (263)
T ss_dssp ----ECCSSCCSBSGGGTTCTTCCEEECTTSCCCB-CG-GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEE
T ss_pred ----EccCCccCCChhhcCcccccEEECCCCcCCC-Ch-HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCc
Confidence 778888774 34556679999999999995 45 689999999999999999965 678999999999999999
Q ss_pred ccCCCCC
Q 007680 159 LSGKIPK 165 (593)
Q Consensus 159 l~~~~p~ 165 (593)
+++.+..
T Consensus 184 ~~~~~~~ 190 (263)
T 1xeu_A 184 CVNEPVK 190 (263)
T ss_dssp EECCCEE
T ss_pred ccCCccc
Confidence 9986444
No 346
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.68 E-value=4.2e-17 Score=149.22 Aligned_cols=132 Identities=20% Similarity=0.152 Sum_probs=110.0
Q ss_pred CCCCcEEECCCCcCc-ccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhhcceeeccCCcccccCCC----
Q 007680 23 LPNIEYLLLTANNLT-GTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLLMFGIRLTGNKLYGRIPP---- 97 (593)
Q Consensus 23 l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~l~~n~l~~~~~~---- 97 (593)
.++|+.|+|++|+|+ +.+|..+..+++|+.|+|++|.+++. ..|..+++|++| ++++|++.+.+|.
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L-------~Ls~N~l~~~~~~~~~~ 93 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKL-------ELSENRIFGGLDMLAEK 93 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEE-------EEESCCCCSCCCHHHHH
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEE-------ECcCCcCchHHHHHHhh
Confidence 578999999999998 67888888899999999999999855 678889999988 7788888765554
Q ss_pred cccccEEEccCCcccCcCC-CCCCCCCCCCEecCCCccCCCCCC---ccccCCccccccccccccccCCC
Q 007680 98 CLVLTVLDVSRNQLSGDIP-STIGGRVDLETLSLASNQFQGPIP---ESVGSLISLESLDLSGNNLSGKI 163 (593)
Q Consensus 98 ~~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p---~~l~~~~~L~~L~l~~N~l~~~~ 163 (593)
+..|++|++++|++++..+ ..+..+++|+.|++++|++++..+ ..+..+++|+.|++++|.+...+
T Consensus 94 l~~L~~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~ 163 (168)
T 2ell_A 94 LPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQEAP 163 (168)
T ss_dssp CTTCCEEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCBCC
T ss_pred CCCCCEEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhhcc
Confidence 3459999999999985432 678999999999999999995444 48999999999999999998644
No 347
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.68 E-value=6e-17 Score=177.86 Aligned_cols=143 Identities=22% Similarity=0.301 Sum_probs=102.6
Q ss_pred EEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhhcce
Q 007680 4 LTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLLMFG 83 (593)
Q Consensus 4 L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~ 83 (593)
+.|+.+.+.+.++ +.. |++|+.|+|++|.|+ .+| .|..+++|+.|+|++|+|++..| |..|++|+.|
T Consensus 26 l~l~~~~i~~~~~--~~~-L~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L------ 92 (605)
T 1m9s_A 26 DNLKKKSVTDAVT--QNE-LNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWL------ 92 (605)
T ss_dssp HHTTCSCTTSEEC--HHH-HTTCCCCBCTTCCCC-CCT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEE------
T ss_pred HhccCCCcccccc--hhc-CCCCCEEECcCCCCC-CCh-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEE------
Confidence 3466777773333 333 889999999999999 455 68999999999999999996655 9999999999
Q ss_pred eeccCCcccc--cCCCcccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCCCCccccCCccccccccccccccC
Q 007680 84 IRLTGNKLYG--RIPPCLVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIPESVGSLISLESLDLSGNNLSG 161 (593)
Q Consensus 84 l~l~~n~l~~--~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~l~~N~l~~ 161 (593)
+|++|++.+ .+..+..|++|+|++|+|++ ++ .+..+++|+.|+|++|+|++. ..+..+++|+.|+|++|++++
T Consensus 93 -~Ls~N~l~~l~~l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~ 167 (605)
T 1m9s_A 93 -FLDENKIKDLSSLKDLKKLKSLSLEHNGISD-IN-GLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISD 167 (605)
T ss_dssp -ECCSSCCCCCTTSTTCTTCCEEECTTSCCCC-CG-GGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCC
T ss_pred -ECcCCCCCCChhhccCCCCCEEEecCCCCCC-Cc-cccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCC
Confidence 555665553 23444457777777777763 33 366677777777777777643 456667777777777777766
Q ss_pred CCC
Q 007680 162 KIP 164 (593)
Q Consensus 162 ~~p 164 (593)
..|
T Consensus 168 ~~~ 170 (605)
T 1m9s_A 168 IVP 170 (605)
T ss_dssp CGG
T ss_pred chh
Confidence 554
No 348
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.67 E-value=8.7e-17 Score=165.11 Aligned_cols=153 Identities=24% Similarity=0.328 Sum_probs=95.2
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhh
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLL 80 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 80 (593)
|+.|++++|.+. .++. +. .+++|++|++++|.+++. +. +..+++|+.|++++|.+++..+ +..+++|++|
T Consensus 157 L~~L~l~~~~~~-~~~~-~~-~l~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L--- 226 (347)
T 4fmz_A 157 LNYLTVTESKVK-DVTP-IA-NLTDLYSLSLNYNQIEDI-SP-LASLTSLHYFTAYVNQITDITP--VANMTRLNSL--- 226 (347)
T ss_dssp CCEEECCSSCCC-CCGG-GG-GCTTCSEEECTTSCCCCC-GG-GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEE---
T ss_pred CcEEEecCCCcC-Cchh-hc-cCCCCCEEEccCCccccc-cc-ccCCCccceeecccCCCCCCch--hhcCCcCCEE---
Confidence 567777777777 5554 43 377777777777777743 33 6677777777777777774443 6667777777
Q ss_pred cceeeccCCccccc--CCCcccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCCCCccccCCcccccccccccc
Q 007680 81 MFGIRLTGNKLYGR--IPPCLVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIPESVGSLISLESLDLSGNN 158 (593)
Q Consensus 81 ~n~l~l~~n~l~~~--~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~l~~N~ 158 (593)
++++|++++. +..+..|++|++++|.+++ ++ .+..+++|+.|++++|++++ + ..+..+++|+.|++++|+
T Consensus 227 ----~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~L~~n~ 298 (347)
T 4fmz_A 227 ----KIGNNKITDLSPLANLSQLTWLEIGTNQISD-IN-AVKDLTKLKMLNVGSNQISD-I-SVLNNLSQLNSLFLNNNQ 298 (347)
T ss_dssp ----ECCSSCCCCCGGGTTCTTCCEEECCSSCCCC-CG-GGTTCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEECCSSC
T ss_pred ----EccCCccCCCcchhcCCCCCEEECCCCccCC-Ch-hHhcCCCcCEEEccCCccCC-C-hhhcCCCCCCEEECcCCc
Confidence 5555555522 2334456666666666663 32 46666666666666666663 3 245666666666666666
Q ss_pred ccCCCCCCCCCCC
Q 007680 159 LSGKIPKLEGEIP 171 (593)
Q Consensus 159 l~~~~p~~~~~~~ 171 (593)
+++..|..+..++
T Consensus 299 l~~~~~~~l~~l~ 311 (347)
T 4fmz_A 299 LGNEDMEVIGGLT 311 (347)
T ss_dssp CCGGGHHHHHTCT
T ss_pred CCCcChhHhhccc
Confidence 6665555444433
No 349
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.67 E-value=5.5e-16 Score=165.18 Aligned_cols=145 Identities=25% Similarity=0.282 Sum_probs=90.0
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhh
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLL 80 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 80 (593)
|++|+|++|+++ .+| +. .+++|++|+|++|+|++. | |+++++|+.|+|++|++++ +| ++.+++|++|+++
T Consensus 66 L~~L~Ls~n~l~-~~~--~~-~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~ 135 (457)
T 3bz5_A 66 LTKLICTSNNIT-TLD--LS-QNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCA 135 (457)
T ss_dssp CSEEECCSSCCS-CCC--CT-TCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECT
T ss_pred CCEEEccCCcCC-eEc--cc-cCCCCCEEECcCCCCcee-e--cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECC
Confidence 566777777776 455 43 366777777777777643 3 6666777777777777664 33 6666666666554
Q ss_pred ccee--------------eccCCccccc--CCCcccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCCCCcccc
Q 007680 81 MFGI--------------RLTGNKLYGR--IPPCLVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIPESVG 144 (593)
Q Consensus 81 ~n~l--------------~l~~n~l~~~--~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~ 144 (593)
+|.+ ++++|+..+. +..+..|++|++++|++++ +| +..+++|+.|++++|++++. .+.
T Consensus 136 ~N~l~~l~l~~l~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~ 209 (457)
T 3bz5_A 136 RNTLTEIDVSHNTQLTELDCHLNKKITKLDVTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLN 209 (457)
T ss_dssp TSCCSCCCCTTCTTCCEEECTTCSCCCCCCCTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCT
T ss_pred CCccceeccccCCcCCEEECCCCCcccccccccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccc
Confidence 4432 3444433322 2234457777777777774 44 66677777777777777643 266
Q ss_pred CCccccccccccccccC
Q 007680 145 SLISLESLDLSGNNLSG 161 (593)
Q Consensus 145 ~~~~L~~L~l~~N~l~~ 161 (593)
.+++|+.|++++|++++
T Consensus 210 ~l~~L~~L~Ls~N~l~~ 226 (457)
T 3bz5_A 210 QNIQLTFLDCSSNKLTE 226 (457)
T ss_dssp TCTTCSEEECCSSCCSC
T ss_pred cCCCCCEEECcCCcccc
Confidence 66777777777777776
No 350
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.66 E-value=1.8e-17 Score=169.60 Aligned_cols=136 Identities=13% Similarity=0.169 Sum_probs=99.8
Q ss_pred cccccccCccCcccEEEEEeCCCCeEEEEEeehhhH--------------H--------HHHHHHHHHHHHhhcCCCCcc
Q 007680 274 FNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLE--------------R--------AFRSFDSECEVLRNVRHRNLI 331 (593)
Q Consensus 274 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------------~--------~~~~~~~E~~~l~~l~h~niv 331 (593)
|++.+.||+|++|.||+|...+|+.||||+++.... . ......+|...|.++.+.++.
T Consensus 97 Y~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~ 176 (397)
T 4gyi_A 97 YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFP 176 (397)
T ss_dssp SEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred EEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 899999999999999999998999999998754210 0 001123566666666444332
Q ss_pred --eeeeeeecCCceEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCC
Q 007680 332 --KILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDEN 409 (593)
Q Consensus 332 --~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~ 409 (593)
..++. ...++||||++|++|.++.. ......++.|++.+|.+||++| ||||||||.|||++++
T Consensus 177 vp~p~~~----~~~~LVME~i~G~~L~~l~~-------~~~~~~l~~qll~~l~~lH~~g----IVHrDLKp~NILl~~d 241 (397)
T 4gyi_A 177 VPEPIAQ----SRHTIVMSLVDALPMRQVSS-------VPDPASLYADLIALILRLAKHG----LIHGDFNEFNILIREE 241 (397)
T ss_dssp CCCEEEE----ETTEEEEECCSCEEGGGCCC-------CSCHHHHHHHHHHHHHHHHHTT----EECSCCSTTSEEEEEE
T ss_pred CCeeeec----cCceEEEEecCCccHhhhcc-------cHHHHHHHHHHHHHHHHHHHCC----CcCCCCCHHHEEEeCC
Confidence 22221 22379999999988866432 1234578899999999999655 9999999999999877
Q ss_pred C----------cEEEEeeccceecC
Q 007680 410 M----------VAHVSDFGIYKLLG 424 (593)
Q Consensus 410 ~----------~~kL~Dfg~a~~~~ 424 (593)
+ .+.|+||+-+....
T Consensus 242 gd~~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 242 KDAEDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp ECSSCTTSEEEEEEECCCTTCEETT
T ss_pred CCcccccccccceEEEEeCCcccCC
Confidence 6 38999999877543
No 351
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.66 E-value=1.9e-16 Score=153.74 Aligned_cols=156 Identities=16% Similarity=0.152 Sum_probs=131.6
Q ss_pred CcEEEeeCcc-ccccCChhhhhCCCCCcEEECCC-CcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCch---
Q 007680 1 MRILTLEGNQ-LSGRLPSTIGHSLPNIEYLLLTA-NNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLS--- 75 (593)
Q Consensus 1 L~~L~Ls~n~-l~~~lp~~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~--- 75 (593)
|++|+|++|+ ++ .+|...+..+++|++|+|++ |+|++..+..|.++++|+.|+|++|++++ +|+ |..+++|+
T Consensus 57 L~~L~l~~n~~l~-~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~ 133 (239)
T 2xwt_C 57 ISRIYVSIDVTLQ-QLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFF 133 (239)
T ss_dssp CCEEEEECCSSCC-EECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEE
T ss_pred CcEEeCCCCCCcc-eeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-ccccccccccc
Confidence 6899999997 88 78876666799999999999 99997777889999999999999999995 666 88888888
Q ss_pred hhhhhcceeeccCC-cccc----cCCCccccc-EEEccCCcccCcCCCCCCCCCCCCEecCCCcc-CCCCCCccccCC-c
Q 007680 76 VLSLLMFGIRLTGN-KLYG----RIPPCLVLT-VLDVSRNQLSGDIPSTIGGRVDLETLSLASNQ-FQGPIPESVGSL-I 147 (593)
Q Consensus 76 ~L~l~~n~l~l~~n-~l~~----~~~~~~~L~-~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~-l~~~~p~~l~~~-~ 147 (593)
+| ++++| ++.+ .+..+..|+ +|++++|+++...+..|.. ++|+.|++++|+ +++..+..|.++ +
T Consensus 134 ~L-------~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~ 205 (239)
T 2xwt_C 134 IL-------EITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYS 205 (239)
T ss_dssp EE-------EEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSB
T ss_pred EE-------ECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhcccc
Confidence 88 78888 7763 244566799 9999999999444444555 899999999995 987667889999 9
Q ss_pred cccccccccccccCCCCCCC
Q 007680 148 SLESLDLSGNNLSGKIPKLE 167 (593)
Q Consensus 148 ~L~~L~l~~N~l~~~~p~~~ 167 (593)
+|+.|++++|++++.++..+
T Consensus 206 ~L~~L~l~~N~l~~l~~~~~ 225 (239)
T 2xwt_C 206 GPSLLDVSQTSVTALPSKGL 225 (239)
T ss_dssp CCSEEECTTCCCCCCCCTTC
T ss_pred CCcEEECCCCccccCChhHh
Confidence 99999999999998766643
No 352
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.66 E-value=3.8e-16 Score=169.76 Aligned_cols=65 Identities=31% Similarity=0.378 Sum_probs=38.4
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhh
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVL 77 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 77 (593)
|+.|+|++|+|+ .+|..++ ++|++|+|++|+|+ .+| ..+++|+.|+|++|+|++ +|. |.+ +|++|
T Consensus 61 L~~L~Ls~n~L~-~lp~~l~---~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L 125 (571)
T 3cvr_A 61 FSELQLNRLNLS-SLPDNLP---PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHL 125 (571)
T ss_dssp CSEEECCSSCCS-CCCSCCC---TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEE
T ss_pred ccEEEeCCCCCC-ccCHhHc---CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEE
Confidence 456666666666 4665543 46666666666666 455 335666666666666664 444 443 55555
No 353
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.64 E-value=6.7e-16 Score=165.25 Aligned_cols=153 Identities=27% Similarity=0.338 Sum_probs=79.9
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhh
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLL 80 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 80 (593)
|+.|+|++|++. .++. +. .+++|+.|+|++|++++ + +.+..+++|+.|+|++|.+++..| +..+++|+.|+++
T Consensus 201 L~~L~l~~n~l~-~~~~-~~-~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~ 273 (466)
T 1o6v_A 201 LESLIATNNQIS-DITP-LG-ILTNLDELSLNGNQLKD-I-GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLG 273 (466)
T ss_dssp CSEEECCSSCCC-CCGG-GG-GCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECC
T ss_pred CCEEEecCCccc-cccc-cc-ccCCCCEEECCCCCccc-c-hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECC
Confidence 455566666655 2332 22 25555555555555553 2 234455555555555555553332 4445555555222
Q ss_pred cce---------------eeccCCccccc--CCCcccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCCCCccc
Q 007680 81 MFG---------------IRLTGNKLYGR--IPPCLVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIPESV 143 (593)
Q Consensus 81 ~n~---------------l~l~~n~l~~~--~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l 143 (593)
+|. +++++|++.+. +..+..|++|++++|++++..| +..+++|+.|++++|++++. ..+
T Consensus 274 ~n~l~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l 349 (466)
T 1o6v_A 274 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSL 349 (466)
T ss_dssp SSCCCCCGGGTTCTTCSEEECCSSCCSCCGGGGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGG
T ss_pred CCccCccccccCCCccCeEEcCCCcccCchhhcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhh
Confidence 111 14555555432 2233346666666666665444 55666666666666666642 356
Q ss_pred cCCccccccccccccccCCCC
Q 007680 144 GSLISLESLDLSGNNLSGKIP 164 (593)
Q Consensus 144 ~~~~~L~~L~l~~N~l~~~~p 164 (593)
..+++|+.|++++|++++..|
T Consensus 350 ~~l~~L~~L~l~~n~l~~~~~ 370 (466)
T 1o6v_A 350 ANLTNINWLSAGHNQISDLTP 370 (466)
T ss_dssp TTCTTCCEEECCSSCCCBCGG
T ss_pred ccCCCCCEEeCCCCccCccch
Confidence 666666666666666666554
No 354
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.64 E-value=1e-16 Score=143.45 Aligned_cols=125 Identities=19% Similarity=0.209 Sum_probs=90.9
Q ss_pred CCCCcEEECCCCcCc-ccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhhcceeeccCCcccccCCC----
Q 007680 23 LPNIEYLLLTANNLT-GTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLLMFGIRLTGNKLYGRIPP---- 97 (593)
Q Consensus 23 l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~l~~n~l~~~~~~---- 97 (593)
.++|+.|++++|.|+ +.+|..+..+++|+.|+|++|.+++. ..|+.+++|++| ++++|++++.+|.
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L-------~Ls~n~i~~~~~~~~~~ 86 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKL-------ELSDNRVSGGLEVLAEK 86 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEE-------ECCSSCCCSCTHHHHHH
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEE-------ECCCCcccchHHHHhhh
Confidence 457888888888887 67777778888888888888888754 567777777777 6666666654433
Q ss_pred cccccEEEccCCcccCc-CCCCCCCCCCCCEecCCCccCCCCCC---ccccCCcccccccccc
Q 007680 98 CLVLTVLDVSRNQLSGD-IPSTIGGRVDLETLSLASNQFQGPIP---ESVGSLISLESLDLSG 156 (593)
Q Consensus 98 ~~~L~~L~l~~N~l~~~-~p~~~~~l~~L~~L~l~~N~l~~~~p---~~l~~~~~L~~L~l~~ 156 (593)
+..|++|++++|++++. .+..++.+++|+.|++++|++++..+ ..+..+++|+.||+++
T Consensus 87 l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 87 CPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp CTTCCEEECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred CCCCCEEECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 33477778888888753 23677888888888888888885444 4677888888888763
No 355
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.64 E-value=3.2e-16 Score=170.29 Aligned_cols=153 Identities=24% Similarity=0.298 Sum_probs=111.3
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhh
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLL 80 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 80 (593)
|++|+|++|+|+ .+| . .+++|++|+|++|+|++ +|. |.+ +|+.|+|++|+|++ +|. .+++|+.|
T Consensus 82 L~~L~Ls~N~l~-~ip-~---~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L--- 145 (571)
T 3cvr_A 82 ITVLEITQNALI-SLP-E---LPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYI--- 145 (571)
T ss_dssp CSEEECCSSCCS-CCC-C---CCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEE---
T ss_pred CCEEECcCCCCc-ccc-c---ccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEE---
Confidence 688999999999 899 2 37899999999999996 777 766 89999999999996 665 67888888
Q ss_pred cceeeccCCcccccCCCc-ccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCCCCccccCCccc-------ccc
Q 007680 81 MFGIRLTGNKLYGRIPPC-LVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIPESVGSLISL-------ESL 152 (593)
Q Consensus 81 ~n~l~l~~n~l~~~~~~~-~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L-------~~L 152 (593)
++++|++++ +|.. .+|++|+|++|+|++ +|. |. ++|+.|+|++|+|+ .+|. +.. +| +.|
T Consensus 146 ----~Ls~N~l~~-lp~~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L 212 (571)
T 3cvr_A 146 ----NADNNQLTM-LPELPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFF 212 (571)
T ss_dssp ----ECCSSCCSC-CCCCCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEE
T ss_pred ----eCCCCccCc-CCCcCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEE
Confidence 777777774 4443 358888888888875 665 65 77888888888887 5666 554 66 888
Q ss_pred ccccccccCCCCCCCCCCCCCCCccCCCcccccCCcc
Q 007680 153 DLSGNNLSGKIPKLEGEIPVKGSFKNFSTESFFGNYA 189 (593)
Q Consensus 153 ~l~~N~l~~~~p~~~~~~~~~~~~~~~~~~~~~~n~~ 189 (593)
+|++|+|+.+ |..+..++ ++....+.+|+.
T Consensus 213 ~Ls~N~l~~l-p~~l~~l~------~L~~L~L~~N~l 242 (571)
T 3cvr_A 213 RCRENRITHI-PENILSLD------PTCTIILEDNPL 242 (571)
T ss_dssp ECCSSCCCCC-CGGGGGSC------TTEEEECCSSSC
T ss_pred ecCCCcceec-CHHHhcCC------CCCEEEeeCCcC
Confidence 8888888854 43332333 333445566654
No 356
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.64 E-value=3.1e-16 Score=160.96 Aligned_cols=164 Identities=26% Similarity=0.400 Sum_probs=136.1
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhh
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLL 80 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 80 (593)
|+.|+|++|++. .++. +. .+++|+.|++++|.+++..+ +..+++|+.|+|++|.+++..+ +..+++|++|
T Consensus 179 L~~L~l~~n~l~-~~~~-~~-~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L--- 248 (347)
T 4fmz_A 179 LYSLSLNYNQIE-DISP-LA-SLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWL--- 248 (347)
T ss_dssp CSEEECTTSCCC-CCGG-GG-GCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEE---
T ss_pred CCEEEccCCccc-cccc-cc-CCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEE---
Confidence 689999999999 6776 54 49999999999999996544 8899999999999999996544 9999999999
Q ss_pred cceeeccCCcccc--cCCCcccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCCCCccccCCcccccccccccc
Q 007680 81 MFGIRLTGNKLYG--RIPPCLVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIPESVGSLISLESLDLSGNN 158 (593)
Q Consensus 81 ~n~l~l~~n~l~~--~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~l~~N~ 158 (593)
++++|.+.+ .+..+..|++|++++|++++ +| .+..+++|+.|++++|++++..|..+..+++|+.|++++|+
T Consensus 249 ----~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~ 322 (347)
T 4fmz_A 249 ----EIGTNQISDINAVKDLTKLKMLNVGSNQISD-IS-VLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNH 322 (347)
T ss_dssp ----ECCSSCCCCCGGGTTCTTCCEEECCSSCCCC-CG-GGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSS
T ss_pred ----ECCCCccCCChhHhcCCCcCEEEccCCccCC-Ch-hhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCc
Confidence 777777763 34556679999999999985 44 58899999999999999998888889999999999999999
Q ss_pred ccCCCCCCCCCCCCCCCccCCCcccccCCc
Q 007680 159 LSGKIPKLEGEIPVKGSFKNFSTESFFGNY 188 (593)
Q Consensus 159 l~~~~p~~~~~~~~~~~~~~~~~~~~~~n~ 188 (593)
+++..| +..++ ++....+.+|+
T Consensus 323 l~~~~~--~~~l~------~L~~L~l~~N~ 344 (347)
T 4fmz_A 323 ITDIRP--LASLS------KMDSADFANQV 344 (347)
T ss_dssp CCCCGG--GGGCT------TCSEESSSCC-
T ss_pred cccccC--hhhhh------ccceeehhhhc
Confidence 998776 33333 44445566664
No 357
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.63 E-value=7.8e-16 Score=164.70 Aligned_cols=146 Identities=24% Similarity=0.289 Sum_probs=97.3
Q ss_pred cEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhhc
Q 007680 2 RILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLLM 81 (593)
Q Consensus 2 ~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~ 81 (593)
+.|+|++|.++ .++. +. .+++|+.|+|++|++++..+ +..+++|+.|+|++|++++..| ++.+++|+.|
T Consensus 246 ~~L~l~~n~l~-~~~~-~~-~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L---- 314 (466)
T 1o6v_A 246 TDLDLANNQIS-NLAP-LS-GLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYL---- 314 (466)
T ss_dssp SEEECCSSCCC-CCGG-GT-TCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEE----
T ss_pred CEEECCCCccc-cchh-hh-cCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEE----
Confidence 44444444444 2322 22 24455555555555543222 4455555555555555553332 4555555555
Q ss_pred ceeeccCCcccccC--CCcccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCCCCccccCCccccccccccccc
Q 007680 82 FGIRLTGNKLYGRI--PPCLVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIPESVGSLISLESLDLSGNNL 159 (593)
Q Consensus 82 n~l~l~~n~l~~~~--~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~l~~N~l 159 (593)
++++|++.+.. ..+..|++|++++|++++. + .+.++++|+.|++++|++++..| +..+++|+.|++++|++
T Consensus 315 ---~L~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~ 387 (466)
T 1o6v_A 315 ---TLYFNNISDISPVSSLTKLQRLFFYNNKVSDV-S-SLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAW 387 (466)
T ss_dssp ---ECCSSCCSCCGGGGGCTTCCEEECCSSCCCCC-G-GGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEE
T ss_pred ---ECcCCcCCCchhhccCccCCEeECCCCccCCc-h-hhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCcc
Confidence 78889888643 3455699999999999964 4 68999999999999999997766 89999999999999999
Q ss_pred cCCCCC
Q 007680 160 SGKIPK 165 (593)
Q Consensus 160 ~~~~p~ 165 (593)
++.+..
T Consensus 388 ~~~p~~ 393 (466)
T 1o6v_A 388 TNAPVN 393 (466)
T ss_dssp ECCCBC
T ss_pred cCCchh
Confidence 985433
No 358
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.63 E-value=7.3e-17 Score=181.46 Aligned_cols=139 Identities=22% Similarity=0.216 Sum_probs=91.7
Q ss_pred hCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhhcceeeccCCcccccCCC---
Q 007680 21 HSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLLMFGIRLTGNKLYGRIPP--- 97 (593)
Q Consensus 21 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~l~~n~l~~~~~~--- 97 (593)
..+++|+.|+|++|+|+ .+|..+.++++|+.|+|++|.|+ .+|..|+.|++|++| +|++|+|+ .+|.
T Consensus 221 ~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L-------~Ls~N~l~-~lp~~~~ 290 (727)
T 4b8c_D 221 YDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVL-------DLSHNRLT-SLPAELG 290 (727)
T ss_dssp -CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEE-------ECTTSCCS-SCCSSGG
T ss_pred ccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEE-------eCcCCcCC-ccChhhc
Confidence 34777777777777777 56666667777777777777777 667777777777777 66666665 3443
Q ss_pred -cccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCCCCccccCCcc-ccccccccccccCCCCCCCCCC
Q 007680 98 -CLVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIPESVGSLIS-LESLDLSGNNLSGKIPKLEGEI 170 (593)
Q Consensus 98 -~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~~~~-L~~L~l~~N~l~~~~p~~~~~~ 170 (593)
+..|++|+|++|.|+ .+|..|+++++|+.|+|++|+|++.+|..+..+.. +..|+|++|.+++.+|..+..+
T Consensus 291 ~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~l~~l 364 (727)
T 4b8c_D 291 SCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHERRFI 364 (727)
T ss_dssp GGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC----
T ss_pred CCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcccccee
Confidence 334777777777776 56666777777777777777777666666655432 2346777777777776654433
No 359
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.63 E-value=1e-15 Score=143.31 Aligned_cols=112 Identities=32% Similarity=0.398 Sum_probs=96.5
Q ss_pred CcEEEeeCccccccCCh-hhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhh
Q 007680 1 MRILTLEGNQLSGRLPS-TIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSL 79 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 79 (593)
|+.|+|++|+|+ .+|. ..+..+++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..|..|..+++|+
T Consensus 31 l~~L~l~~n~i~-~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~---- 105 (192)
T 1w8a_A 31 TTELLLNDNELG-RISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLK---- 105 (192)
T ss_dssp CSEEECCSCCCC-SBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCC----
T ss_pred CCEEECCCCcCC-ccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCC----
Confidence 689999999999 6665 3344599999999999999998899999999999999999999988777777766654
Q ss_pred hcceeeccCCcccccCCCcccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCCCC
Q 007680 80 LMFGIRLTGNKLYGRIPPCLVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIP 140 (593)
Q Consensus 80 ~~n~l~l~~n~l~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 140 (593)
+|+|++|+|++.+|..|..+++|+.|+|++|++++..+
T Consensus 106 -----------------------~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 106 -----------------------TLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp -----------------------EEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred -----------------------EEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 55777888888888899999999999999999986543
No 360
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.62 E-value=3.8e-15 Score=158.65 Aligned_cols=141 Identities=24% Similarity=0.285 Sum_probs=108.4
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhh
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLL 80 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 80 (593)
|++|+|++|+++ .+| ++.. +++|++|+|++|+|++. | ++.+++|+.|+|++|+|++. | |+.+++|++|
T Consensus 44 L~~L~Ls~n~l~-~~~-~l~~-l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L--- 111 (457)
T 3bz5_A 44 LTSLDCHNSSIT-DMT-GIEK-LTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYL--- 111 (457)
T ss_dssp CCEEECCSSCCC-CCT-TGGG-CTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEE---
T ss_pred CCEEEccCCCcc-cCh-hhcc-cCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEE---
Confidence 689999999999 677 5664 99999999999999964 4 99999999999999999964 4 9999999999
Q ss_pred cceeeccCCccccc-CCCcccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCCCCccccCCccccccccccccc
Q 007680 81 MFGIRLTGNKLYGR-IPPCLVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIPESVGSLISLESLDLSGNNL 159 (593)
Q Consensus 81 ~n~l~l~~n~l~~~-~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~l~~N~l 159 (593)
++++|++++. +..+..|++|++++|++++ ++ ++++++|+.|++++|+..+.+ .+..+++|+.|++++|++
T Consensus 112 ----~L~~N~l~~l~~~~l~~L~~L~l~~N~l~~-l~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l 182 (457)
T 3bz5_A 112 ----NCDTNKLTKLDVSQNPLLTYLNCARNTLTE-ID--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKI 182 (457)
T ss_dssp ----ECCSSCCSCCCCTTCTTCCEEECTTSCCSC-CC--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCC
T ss_pred ----ECCCCcCCeecCCCCCcCCEEECCCCccce-ec--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCcc
Confidence 6666666642 3344558888888888875 33 666777777777777544444 356666777777777776
Q ss_pred cCC
Q 007680 160 SGK 162 (593)
Q Consensus 160 ~~~ 162 (593)
++.
T Consensus 183 ~~l 185 (457)
T 3bz5_A 183 TEL 185 (457)
T ss_dssp CCC
T ss_pred cee
Confidence 663
No 361
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.60 E-value=1e-17 Score=182.83 Aligned_cols=150 Identities=21% Similarity=0.212 Sum_probs=81.4
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCc-------------CcccCCccCCCCC-------------------
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANN-------------LTGTIPNSITNAT------------------- 48 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~-------------l~~~~p~~~~~l~------------------- 48 (593)
|+.|+|++|+|+ .||.+++. +++|+.|++++|. +.+..|+.+++++
T Consensus 351 L~~L~Ls~n~L~-~Lp~~i~~-l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~~L~~l 428 (567)
T 1dce_A 351 LFRCELSVEKST-VLQSELES-CKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDDLRSK 428 (567)
T ss_dssp SSSCCCCHHHHH-HHHHHHHH-HHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHHHHHHH
T ss_pred ceeccCChhhHH-hhHHHHHH-HHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccchhhhh
Confidence 345677777776 67777765 7777777776654 3334444333222
Q ss_pred -------------CCcEEEccCCcccccccccccCCCCchhhhhhcceeeccCCcccccCC----CcccccEEEccCCcc
Q 007680 49 -------------KLIVLDLGFNSFSGHILNTFGNLRHLSVLSLLMFGIRLTGNKLYGRIP----PCLVLTVLDVSRNQL 111 (593)
Q Consensus 49 -------------~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~l~~n~l~~~~~----~~~~L~~L~l~~N~l 111 (593)
.|+.|+|++|+|++ +|. |+.+++|+.| ++++|+|+ .+| .+.+|+.|+|++|+|
T Consensus 429 ~l~~n~i~~l~~~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L-------~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l 498 (567)
T 1dce_A 429 FLLENSVLKMEYADVRVLHLAHKDLTV-LCH-LEQLLLVTHL-------DLSHNRLR-ALPPALAALRCLEVLQASDNAL 498 (567)
T ss_dssp HHHHHHHHHHHHTTCSEEECTTSCCSS-CCC-GGGGTTCCEE-------ECCSSCCC-CCCGGGGGCTTCCEEECCSSCC
T ss_pred hhhcccccccCccCceEEEecCCCCCC-CcC-ccccccCcEe-------ecCccccc-ccchhhhcCCCCCEEECCCCCC
Confidence 34455555555553 343 5555555555 44444444 222 223355555555555
Q ss_pred cCcCCCCCCCCCCCCEecCCCccCCCCC-CccccCCccccccccccccccCCCC
Q 007680 112 SGDIPSTIGGRVDLETLSLASNQFQGPI-PESVGSLISLESLDLSGNNLSGKIP 164 (593)
Q Consensus 112 ~~~~p~~~~~l~~L~~L~l~~N~l~~~~-p~~l~~~~~L~~L~l~~N~l~~~~p 164 (593)
++ +| .++++++|+.|+|++|+|++.. |..+..+++|+.|+|++|++++.+|
T Consensus 499 ~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 499 EN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp CC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred CC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 53 44 4555555555555555555443 5555555555555555555555444
No 362
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.60 E-value=3.5e-15 Score=139.74 Aligned_cols=130 Identities=25% Similarity=0.315 Sum_probs=108.5
Q ss_pred CcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhhcceeeccCCcccccCCCcccccEEE
Q 007680 26 IEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLLMFGIRLTGNKLYGRIPPCLVLTVLD 105 (593)
Q Consensus 26 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~l~~n~l~~~~~~~~~L~~L~ 105 (593)
-+.+++++|.|+ .+|..+. ++|+.|+|++|+|+ .+|..|..+++| ++|+
T Consensus 12 ~~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L---------------------------~~L~ 60 (193)
T 2wfh_A 12 DTVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHL---------------------------TLID 60 (193)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTC---------------------------CEEE
T ss_pred CCEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCC---------------------------CEEE
Confidence 368999999999 6787664 68999999999999 677777666655 4557
Q ss_pred ccCCcccCcCCCCCCCCCCCCEecCCCccCCCCCCccccCCccccccccccccccCCCCCCCCCCCCCCCccCCCccccc
Q 007680 106 VSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIPESVGSLISLESLDLSGNNLSGKIPKLEGEIPVKGSFKNFSTESFF 185 (593)
Q Consensus 106 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~~~~~~~ 185 (593)
|++|+|++..+..|.++++|+.|+|++|+|++..|..|.++++|+.|+|++|++++.++..+..++. +....+.
T Consensus 61 Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~------L~~L~L~ 134 (193)
T 2wfh_A 61 LSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSA------LSHLAIG 134 (193)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTT------CCEEECC
T ss_pred CCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCcc------ccEEEeC
Confidence 7888888777888999999999999999999888889999999999999999999988877765554 4456788
Q ss_pred CCccCCC
Q 007680 186 GNYALCG 192 (593)
Q Consensus 186 ~n~~~c~ 192 (593)
+|++.|.
T Consensus 135 ~N~~~C~ 141 (193)
T 2wfh_A 135 ANPLYCD 141 (193)
T ss_dssp SSCEECS
T ss_pred CCCeecC
Confidence 9988773
No 363
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.59 E-value=2.4e-15 Score=141.31 Aligned_cols=125 Identities=20% Similarity=0.261 Sum_probs=105.3
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhh
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLL 80 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 80 (593)
|++|+|++|.+. .++ .+. .+++|++|+|++|+|++..|..|.++++|+.|+|++|++++..|..|+.+++|++|
T Consensus 68 L~~L~l~~n~~~-~~~-~l~-~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L--- 141 (197)
T 4ezg_A 68 IKDLTINNIHAT-NYN-PIS-GLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSI--- 141 (197)
T ss_dssp CSEEEEESCCCS-CCG-GGT-TCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEE---
T ss_pred CCEEEccCCCCC-cch-hhh-cCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEE---
Confidence 689999999887 555 565 49999999999999998889999999999999999999998889999999999999
Q ss_pred cceeeccCCcccccCC---CcccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCC
Q 007680 81 MFGIRLTGNKLYGRIP---PCLVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQG 137 (593)
Q Consensus 81 ~n~l~l~~n~l~~~~~---~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 137 (593)
++++|++.+.++ .+..|++|++++|++++ ++ .+..+++|+.|++++|++.+
T Consensus 142 ----~L~~n~~i~~~~~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 142 ----DLSYNGAITDIMPLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp ----ECCSCTBCCCCGGGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC----
T ss_pred ----EccCCCCccccHhhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCcccCC
Confidence 777887222333 44569999999999995 55 78999999999999999863
No 364
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.59 E-value=7.3e-16 Score=142.11 Aligned_cols=126 Identities=18% Similarity=0.177 Sum_probs=95.8
Q ss_pred CCCCcEEECCCCcCcccCCccCCCCC-CCcEEEccCCcccccccccccCCCCchhhhhhcceeeccCCcccccCC----C
Q 007680 23 LPNIEYLLLTANNLTGTIPNSITNAT-KLIVLDLGFNSFSGHILNTFGNLRHLSVLSLLMFGIRLTGNKLYGRIP----P 97 (593)
Q Consensus 23 l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~l~~n~l~~~~~----~ 97 (593)
+++|++|+|++|+|+ .+|. +..+. +|+.|+|++|.|++. ..|+.+++|++| ++++|++++..+ .
T Consensus 18 ~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L-------~Ls~N~l~~~~~~~~~~ 86 (176)
T 1a9n_A 18 AVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTL-------LVNNNRICRIGEGLDQA 86 (176)
T ss_dssp TTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEE-------ECCSSCCCEECSCHHHH
T ss_pred cCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEE-------ECCCCcccccCcchhhc
Confidence 677888888888888 4454 44444 788888888888754 567778888877 666777663322 2
Q ss_pred cccccEEEccCCcccCcCCC--CCCCCCCCCEecCCCccCCCCCCcc----ccCCccccccccccccccC
Q 007680 98 CLVLTVLDVSRNQLSGDIPS--TIGGRVDLETLSLASNQFQGPIPES----VGSLISLESLDLSGNNLSG 161 (593)
Q Consensus 98 ~~~L~~L~l~~N~l~~~~p~--~~~~l~~L~~L~l~~N~l~~~~p~~----l~~~~~L~~L~l~~N~l~~ 161 (593)
+..|++|++++|+|+ .+|. .+..+++|+.|++++|+++ .+|.. +..+++|+.||+++|....
T Consensus 87 l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 87 LPDLTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLKE 154 (176)
T ss_dssp CTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHHH
T ss_pred CCCCCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHHH
Confidence 345888899999997 5665 7888999999999999998 56764 8899999999999998864
No 365
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.59 E-value=8.2e-15 Score=161.17 Aligned_cols=32 Identities=41% Similarity=0.581 Sum_probs=17.7
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCcCc
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLT 37 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~ 37 (593)
|++|+|++|+|+ .+|. .+++|++|+|++|+|+
T Consensus 83 L~~L~Ls~N~l~-~lp~----~l~~L~~L~Ls~N~l~ 114 (622)
T 3g06_A 83 LRTLEVSGNQLT-SLPV----LPPGLLELSIFSNPLT 114 (622)
T ss_dssp CCEEEECSCCCS-CCCC----CCTTCCEEEECSCCCC
T ss_pred CCEEEcCCCcCC-cCCC----CCCCCCEEECcCCcCC
Confidence 455666666665 4554 2455555555555555
No 366
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.58 E-value=4.3e-15 Score=152.73 Aligned_cols=154 Identities=15% Similarity=0.083 Sum_probs=118.7
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcE-EECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhh
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEY-LLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSL 79 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~-L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 79 (593)
|++|+|++|++.+.+|.+.+.++++|++ +.+++|+|+...|+.|.++++|+.|++++|+|+...+..+....++..|++
T Consensus 56 L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l 135 (350)
T 4ay9_X 56 LEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDI 135 (350)
T ss_dssp CCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEE
T ss_pred CCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhh
Confidence 7899999999976899888777988775 677889999888899999999999999999999766666666666666665
Q ss_pred hcc-------------------eeeccCCcccccCCC---cccccEEEccC-CcccCcCCCCCCCCCCCCEecCCCccCC
Q 007680 80 LMF-------------------GIRLTGNKLYGRIPP---CLVLTVLDVSR-NQLSGDIPSTIGGRVDLETLSLASNQFQ 136 (593)
Q Consensus 80 ~~n-------------------~l~l~~n~l~~~~~~---~~~L~~L~l~~-N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 136 (593)
.++ .+++++|+++..-+. ...|++|++++ |.++...++.|.++++|+.|+|++|+|+
T Consensus 136 ~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~ 215 (350)
T 4ay9_X 136 QDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIH 215 (350)
T ss_dssp ESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCC
T ss_pred ccccccccccccchhhcchhhhhhccccccccCCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcC
Confidence 321 157889998743222 23599999985 7777545567899999999999999999
Q ss_pred CCCCccccCCcccccccc
Q 007680 137 GPIPESVGSLISLESLDL 154 (593)
Q Consensus 137 ~~~p~~l~~~~~L~~L~l 154 (593)
...+..+.++.+|+.+++
T Consensus 216 ~lp~~~~~~L~~L~~l~~ 233 (350)
T 4ay9_X 216 SLPSYGLENLKKLRARST 233 (350)
T ss_dssp CCCSSSCTTCCEEECTTC
T ss_pred ccChhhhccchHhhhccC
Confidence 555555666555555544
No 367
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.58 E-value=2.1e-15 Score=165.87 Aligned_cols=152 Identities=24% Similarity=0.263 Sum_probs=85.4
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccC----------
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGN---------- 70 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~---------- 70 (593)
|++|+|++|+|+ .+|. .+++|+.|+|++|+|+ .+|.. +++|+.|+|++|+|++ +|..+.+
T Consensus 103 L~~L~Ls~N~l~-~l~~----~l~~L~~L~L~~N~l~-~lp~~---l~~L~~L~Ls~N~l~~-l~~~~~~L~~L~L~~N~ 172 (622)
T 3g06_A 103 LLELSIFSNPLT-HLPA----LPSGLCKLWIFGNQLT-SLPVL---PPGLQELSVSDNQLAS-LPALPSELCKLWAYNNQ 172 (622)
T ss_dssp CCEEEECSCCCC-CCCC----CCTTCCEEECCSSCCS-CCCCC---CTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSC
T ss_pred CCEEECcCCcCC-CCCC----CCCCcCEEECCCCCCC-cCCCC---CCCCCEEECcCCcCCC-cCCccCCCCEEECCCCC
Confidence 566777777776 5665 2455666666666665 24432 2555555555555553 2222211
Q ss_pred -------CCCchhhhhhcce-------------eeccCCcccccCCCc-ccccEEEccCCcccCcCCCCCCCCCCCCEec
Q 007680 71 -------LRHLSVLSLLMFG-------------IRLTGNKLYGRIPPC-LVLTVLDVSRNQLSGDIPSTIGGRVDLETLS 129 (593)
Q Consensus 71 -------l~~L~~L~l~~n~-------------l~l~~n~l~~~~~~~-~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 129 (593)
+++|+.|+|++|. +++++|.++ .+|.. .+|++|+|++|+|++ +| ..+++|+.|+
T Consensus 173 l~~l~~~~~~L~~L~Ls~N~l~~l~~~~~~L~~L~L~~N~l~-~l~~~~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~ 247 (622)
T 3g06_A 173 LTSLPMLPSGLQELSVSDNQLASLPTLPSELYKLWAYNNRLT-SLPALPSGLKELIVSGNRLTS-LP---VLPSELKELM 247 (622)
T ss_dssp CSCCCCCCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCS-SCCCCCTTCCEEECCSSCCSC-CC---CCCTTCCEEE
T ss_pred CCCCcccCCCCcEEECCCCCCCCCCCccchhhEEECcCCccc-ccCCCCCCCCEEEccCCccCc-CC---CCCCcCcEEE
Confidence 1455555444433 244555554 22222 347777777777774 55 3456777777
Q ss_pred CCCccCCCCCCccccCCccccccccccccccCCCCCCCCCCCC
Q 007680 130 LASNQFQGPIPESVGSLISLESLDLSGNNLSGKIPKLEGEIPV 172 (593)
Q Consensus 130 l~~N~l~~~~p~~l~~~~~L~~L~l~~N~l~~~~p~~~~~~~~ 172 (593)
|++|+|+ .+|. .+++|+.|+|++|+++. +|..+..++.
T Consensus 248 Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~~-lp~~l~~l~~ 285 (622)
T 3g06_A 248 VSGNRLT-SLPM---LPSGLLSLSVYRNQLTR-LPESLIHLSS 285 (622)
T ss_dssp CCSSCCS-CCCC---CCTTCCEEECCSSCCCS-CCGGGGGSCT
T ss_pred CCCCCCC-cCCc---ccccCcEEeCCCCCCCc-CCHHHhhccc
Confidence 7777777 4554 45677777777777773 3544444443
No 368
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.57 E-value=1.1e-15 Score=171.80 Aligned_cols=152 Identities=23% Similarity=0.272 Sum_probs=100.0
Q ss_pred cEEEeeCccccccCChhhhhCCCCC-----cEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchh
Q 007680 2 RILTLEGNQLSGRLPSTIGHSLPNI-----EYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSV 76 (593)
Q Consensus 2 ~~L~Ls~n~l~~~lp~~~~~~l~~L-----~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 76 (593)
+.|+|++|.+. .+|..+.. ...| ..++++.|++. ..|+.|..+++|+.|+|++|.+. .+|..+..+++|++
T Consensus 176 ~~l~L~~n~~~-~~~~~~l~-~l~Ls~~~i~~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~ 251 (727)
T 4b8c_D 176 PKIELFANGKD-EANQALLQ-HKKLSQYSIDEDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTR 251 (727)
T ss_dssp -------------------------------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSC
T ss_pred ceEEeeCCCCC-cchhhHhh-cCccCcccccCcccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCE
Confidence 56889999998 56665543 2233 33445556666 66888999999999999999999 67777889999999
Q ss_pred hhhhcceeeccCCcccccCCC----cccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCCCCccccCCcccccc
Q 007680 77 LSLLMFGIRLTGNKLYGRIPP----CLVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIPESVGSLISLESL 152 (593)
Q Consensus 77 L~l~~n~l~l~~n~l~~~~~~----~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L 152 (593)
| +|++|+|+ .+|. +..|++|+|++|+|+ .+|..|+++++|+.|+|++|.|+ .+|..|..+++|+.|
T Consensus 252 L-------~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L 321 (727)
T 4b8c_D 252 L-------YLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFL 321 (727)
T ss_dssp C-------BCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCE
T ss_pred E-------EeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEE
Confidence 9 77777777 5553 456999999999999 78999999999999999999998 789889999999999
Q ss_pred ccccccccCCCCCCC
Q 007680 153 DLSGNNLSGKIPKLE 167 (593)
Q Consensus 153 ~l~~N~l~~~~p~~~ 167 (593)
+|++|+|++.+|..+
T Consensus 322 ~L~~N~l~~~~p~~~ 336 (727)
T 4b8c_D 322 GVEGNPLEKQFLKIL 336 (727)
T ss_dssp ECTTSCCCSHHHHHH
T ss_pred eCCCCccCCCChHHH
Confidence 999999999888754
No 369
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.57 E-value=1.2e-16 Score=163.27 Aligned_cols=162 Identities=17% Similarity=0.159 Sum_probs=107.5
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCcCccc-CCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhh
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGT-IPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSL 79 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 79 (593)
|+.|+|++|.+.+ .+..++. +++|++|+|++|.+++. +|..+..+++|+.|+|++|.+++..|..|+.+++|++|
T Consensus 72 l~~L~l~~n~l~~-~~~~~~~-~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L-- 147 (336)
T 2ast_B 72 VIAFRCPRSFMDQ-PLAEHFS-PFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRL-- 147 (336)
T ss_dssp CSEEECTTCEECS-CCCSCCC-CBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEE--
T ss_pred ceEEEcCCccccc-cchhhcc-CCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEE--
Confidence 4677888888874 4444554 78888888888887755 67777788888888888888877777778888888888
Q ss_pred hcceeeccCC-cccc-----cCCCcccccEEEccCC-cccCc-CCCCCCCCC-CCCEecCCCc--cCC-CCCCccccCCc
Q 007680 80 LMFGIRLTGN-KLYG-----RIPPCLVLTVLDVSRN-QLSGD-IPSTIGGRV-DLETLSLASN--QFQ-GPIPESVGSLI 147 (593)
Q Consensus 80 ~~n~l~l~~n-~l~~-----~~~~~~~L~~L~l~~N-~l~~~-~p~~~~~l~-~L~~L~l~~N--~l~-~~~p~~l~~~~ 147 (593)
++++| .+++ .+..+..|++|++++| .+++. ++..+..++ +|++|++++| .++ +.+|..+..++
T Consensus 148 -----~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~ 222 (336)
T 2ast_B 148 -----NLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCP 222 (336)
T ss_dssp -----ECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCT
T ss_pred -----ECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCC
Confidence 55555 4442 1223445777777777 66643 455556666 7777777777 343 23455566677
Q ss_pred ccccccccccc-ccCCCCCCCCCCC
Q 007680 148 SLESLDLSGNN-LSGKIPKLEGEIP 171 (593)
Q Consensus 148 ~L~~L~l~~N~-l~~~~p~~~~~~~ 171 (593)
+|+.|++++|. +++..+..+..++
T Consensus 223 ~L~~L~l~~~~~l~~~~~~~l~~l~ 247 (336)
T 2ast_B 223 NLVHLDLSDSVMLKNDCFQEFFQLN 247 (336)
T ss_dssp TCSEEECTTCTTCCGGGGGGGGGCT
T ss_pred CCCEEeCCCCCcCCHHHHHHHhCCC
Confidence 77777777777 5554444444443
No 370
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.57 E-value=1.8e-14 Score=153.36 Aligned_cols=119 Identities=24% Similarity=0.371 Sum_probs=59.6
Q ss_pred CCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhhcceeeccCCcccc--cCCCcccc
Q 007680 24 PNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLLMFGIRLTGNKLYG--RIPPCLVL 101 (593)
Q Consensus 24 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~l~~n~l~~--~~~~~~~L 101 (593)
++|++|+|++|+|++ +| +|.++++|++|++++|++++ +|..+ .+|++| ++++|++.+ .+..+..|
T Consensus 131 ~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L-------~L~~n~l~~l~~~~~l~~L 197 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFI-------AAGNNQLEELPELQNLPFL 197 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEE-------ECCSSCCSSCCCCTTCTTC
T ss_pred CCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEE-------ECcCCcCCcCccccCCCCC
Confidence 466666666666664 55 46666666666666666663 44322 355555 444444442 11222235
Q ss_pred cEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCCCCccccCCccccccccccccccC
Q 007680 102 TVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIPESVGSLISLESLDLSGNNLSG 161 (593)
Q Consensus 102 ~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~l~~N~l~~ 161 (593)
++|++++|++++ +|... ++|+.|++++|+++ .+|. +..+++|+.|++++|++++
T Consensus 198 ~~L~l~~N~l~~-l~~~~---~~L~~L~l~~n~l~-~lp~-~~~l~~L~~L~l~~N~l~~ 251 (454)
T 1jl5_A 198 TAIYADNNSLKK-LPDLP---LSLESIVAGNNILE-ELPE-LQNLPFLTTIYADNNLLKT 251 (454)
T ss_dssp CEEECCSSCCSS-CCCCC---TTCCEEECCSSCCS-SCCC-CTTCTTCCEEECCSSCCSS
T ss_pred CEEECCCCcCCc-CCCCc---CcccEEECcCCcCC-cccc-cCCCCCCCEEECCCCcCCc
Confidence 555555555543 33221 34555555555554 3442 4455555555555555544
No 371
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.57 E-value=3.9e-17 Score=170.38 Aligned_cols=155 Identities=19% Similarity=0.262 Sum_probs=109.0
Q ss_pred CcEEEeeCc---cccccCChhhh------hCCCCCcEEECCCCcCcc----cCCccCCCCCCCcEEEccCCccccccccc
Q 007680 1 MRILTLEGN---QLSGRLPSTIG------HSLPNIEYLLLTANNLTG----TIPNSITNATKLIVLDLGFNSFSGHILNT 67 (593)
Q Consensus 1 L~~L~Ls~n---~l~~~lp~~~~------~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 67 (593)
|++|+|++| ++++.+|.++. ..+++|++|+|++|+|++ .+|..+..+++|+.|+|++|.++...+..
T Consensus 62 L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~ 141 (386)
T 2ca6_A 62 LEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAK 141 (386)
T ss_dssp CCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHH
T ss_pred ccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHH
Confidence 678888885 45556666652 347889999999999886 46777888889999999999887544444
Q ss_pred ccC----C---------CCchhhhhhcceeeccCCccc-ccCC-------CcccccEEEccCCccc--C---cCCCCCCC
Q 007680 68 FGN----L---------RHLSVLSLLMFGIRLTGNKLY-GRIP-------PCLVLTVLDVSRNQLS--G---DIPSTIGG 121 (593)
Q Consensus 68 ~~~----l---------~~L~~L~l~~n~l~l~~n~l~-~~~~-------~~~~L~~L~l~~N~l~--~---~~p~~~~~ 121 (593)
+.. + ++|++| ++++|+++ +.++ .+..|++|++++|+++ | ..|..+..
T Consensus 142 l~~~l~~l~~~~~~~~~~~L~~L-------~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~ 214 (386)
T 2ca6_A 142 IARALQELAVNKKAKNAPPLRSI-------ICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAY 214 (386)
T ss_dssp HHHHHHHHHHHHHHHTCCCCCEE-------ECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGG
T ss_pred HHHHHHHHhhhhhcccCCCCcEE-------ECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhc
Confidence 433 3 788888 66666665 2222 3445777888877776 2 34446777
Q ss_pred CCCCCEecCCCccCC----CCCCccccCCccccccccccccccCC
Q 007680 122 RVDLETLSLASNQFQ----GPIPESVGSLISLESLDLSGNNLSGK 162 (593)
Q Consensus 122 l~~L~~L~l~~N~l~----~~~p~~l~~~~~L~~L~l~~N~l~~~ 162 (593)
+++|+.|+|++|+|+ +.+|..+..+++|+.|+|++|++++.
T Consensus 215 ~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~ 259 (386)
T 2ca6_A 215 CQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSAR 259 (386)
T ss_dssp CTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHH
T ss_pred CCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchh
Confidence 777777777777774 35666777777777777777777654
No 372
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.57 E-value=6.7e-17 Score=165.11 Aligned_cols=150 Identities=19% Similarity=0.248 Sum_probs=75.2
Q ss_pred CcEEEeeCcccccc-CChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCC-cccc-cccccccCCCCchhh
Q 007680 1 MRILTLEGNQLSGR-LPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFN-SFSG-HILNTFGNLRHLSVL 77 (593)
Q Consensus 1 L~~L~Ls~n~l~~~-lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~-~~p~~~~~l~~L~~L 77 (593)
|+.|+|++|.+++. +|..+. .+++|++|+|++|.+++..|..|..+++|+.|+|++| .+++ .++..+..+++|++|
T Consensus 95 L~~L~L~~~~l~~~~~~~~~~-~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L 173 (336)
T 2ast_B 95 VQHMDLSNSVIEVSTLHGILS-QCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDEL 173 (336)
T ss_dssp CCEEECTTCEECHHHHHHHHT-TBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEE
T ss_pred CCEEEccCCCcCHHHHHHHHh-hCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEE
Confidence 34555555555533 444333 2555555555555555555555555555555555555 4443 134445555555555
Q ss_pred hhhcceeeccCC-ccccc-----CCCcc-cccEEEccCCc--cc-CcCCCCCCCCCCCCEecCCCcc-CCCCCCccccCC
Q 007680 78 SLLMFGIRLTGN-KLYGR-----IPPCL-VLTVLDVSRNQ--LS-GDIPSTIGGRVDLETLSLASNQ-FQGPIPESVGSL 146 (593)
Q Consensus 78 ~l~~n~l~l~~n-~l~~~-----~~~~~-~L~~L~l~~N~--l~-~~~p~~~~~l~~L~~L~l~~N~-l~~~~p~~l~~~ 146 (593)
++++| .+++. +..+. +|++|++++|. ++ +.+|..+..+++|+.|++++|. +++..+..+..+
T Consensus 174 -------~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l 246 (336)
T 2ast_B 174 -------NLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQL 246 (336)
T ss_dssp -------ECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGC
T ss_pred -------cCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCC
Confidence 44444 44321 22233 45555555552 32 2334444455555555555555 443444455555
Q ss_pred cccccccccccc
Q 007680 147 ISLESLDLSGNN 158 (593)
Q Consensus 147 ~~L~~L~l~~N~ 158 (593)
++|+.|++++|.
T Consensus 247 ~~L~~L~l~~~~ 258 (336)
T 2ast_B 247 NYLQHLSLSRCY 258 (336)
T ss_dssp TTCCEEECTTCT
T ss_pred CCCCEeeCCCCC
Confidence 555555555554
No 373
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.56 E-value=8.7e-15 Score=134.03 Aligned_cols=104 Identities=24% Similarity=0.316 Sum_probs=65.2
Q ss_pred cEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhhc
Q 007680 2 RILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLLM 81 (593)
Q Consensus 2 ~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~ 81 (593)
+.|++++|+|+ .+|..++ ++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|..+++|+
T Consensus 12 ~~l~~s~n~l~-~ip~~~~---~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~------ 81 (170)
T 3g39_A 12 TTVDCSGKSLA-SVPTGIP---TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLT------ 81 (170)
T ss_dssp TEEECTTSCCS-SCCSCCC---TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCC------
T ss_pred CEEEeCCCCcC-ccCccCC---CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCC------
Confidence 45667777776 5665543 4666677777777665566666666677777777666655554455444443
Q ss_pred ceeeccCCcccccCCCcccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCC
Q 007680 82 FGIRLTGNKLYGRIPPCLVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQ 136 (593)
Q Consensus 82 n~l~l~~n~l~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 136 (593)
+|+|++|+|++..+..|.++++|+.|+|++|+++
T Consensus 82 ---------------------~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 115 (170)
T 3g39_A 82 ---------------------QLSLNDNQLKSIPRGAFDNLKSLTHIWLLNNPWD 115 (170)
T ss_dssp ---------------------EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred ---------------------EEECCCCccCEeCHHHhcCCCCCCEEEeCCCCCC
Confidence 3455566666545555666777777777777766
No 374
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.55 E-value=7.2e-15 Score=135.11 Aligned_cols=103 Identities=21% Similarity=0.297 Sum_probs=63.4
Q ss_pred EEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhhcc
Q 007680 3 ILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLLMF 82 (593)
Q Consensus 3 ~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n 82 (593)
.+++++|+++ .+|..++ ++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|..+++|
T Consensus 16 ~l~~~~n~l~-~iP~~~~---~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L-------- 83 (174)
T 2r9u_A 16 LVNCQNIRLA-SVPAGIP---TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQL-------- 83 (174)
T ss_dssp EEECCSSCCS-SCCSCCC---TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC--------
T ss_pred EEEeCCCCCC-ccCCCcC---CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchh--------
Confidence 5666666665 6666543 466666666666666556666666666666666666665444444444444
Q ss_pred eeeccCCcccccCCCcccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCC
Q 007680 83 GIRLTGNKLYGRIPPCLVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQ 136 (593)
Q Consensus 83 ~l~l~~n~l~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 136 (593)
++|+|++|+|++..+..|..+++|+.|+|++|++.
T Consensus 84 -------------------~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 84 -------------------TQLDLNDNHLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp -------------------CEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred -------------------hEEECCCCccceeCHHHhccccCCCEEEeCCCCcc
Confidence 34455666666444445667777777777777776
No 375
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.55 E-value=7.2e-17 Score=168.38 Aligned_cols=166 Identities=21% Similarity=0.287 Sum_probs=128.4
Q ss_pred CcEEEeeCccccccCChhhh---hCCCCCcEEECCCC---cCcccCCccC-------CCCCCCcEEEccCCcccc----c
Q 007680 1 MRILTLEGNQLSGRLPSTIG---HSLPNIEYLLLTAN---NLTGTIPNSI-------TNATKLIVLDLGFNSFSG----H 63 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~---~~l~~L~~L~L~~N---~l~~~~p~~~-------~~l~~L~~L~L~~N~l~~----~ 63 (593)
|+.|+|++|++++..+..+. ..+++|++|+|++| ++++.+|..+ ..+++|+.|+|++|.+++ .
T Consensus 34 L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~ 113 (386)
T 2ca6_A 34 VKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEP 113 (386)
T ss_dssp CCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTHHH
T ss_pred ccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHHHH
Confidence 68999999999865444432 24899999999996 4555666655 789999999999999997 4
Q ss_pred ccccccCCCCchhhhhhcceeeccCCcccc----cCCC----c---------ccccEEEccCCccc-CcCC---CCCCCC
Q 007680 64 ILNTFGNLRHLSVLSLLMFGIRLTGNKLYG----RIPP----C---------LVLTVLDVSRNQLS-GDIP---STIGGR 122 (593)
Q Consensus 64 ~p~~~~~l~~L~~L~l~~n~l~l~~n~l~~----~~~~----~---------~~L~~L~l~~N~l~-~~~p---~~~~~l 122 (593)
+|..|..+++|++| ++++|.+.+ .++. + ..|++|+|++|+++ +.+| ..+..+
T Consensus 114 l~~~l~~~~~L~~L-------~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~ 186 (386)
T 2ca6_A 114 LIDFLSKHTPLEHL-------YLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSH 186 (386)
T ss_dssp HHHHHHHCTTCCEE-------ECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHC
T ss_pred HHHHHHhCCCCCEE-------ECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhC
Confidence 78889999999999 777777752 2222 2 57999999999997 3445 456788
Q ss_pred CCCCEecCCCccCC--C---CCCccccCCcccccccccccccc----CCCCCCCCCCCCC
Q 007680 123 VDLETLSLASNQFQ--G---PIPESVGSLISLESLDLSGNNLS----GKIPKLEGEIPVK 173 (593)
Q Consensus 123 ~~L~~L~l~~N~l~--~---~~p~~l~~~~~L~~L~l~~N~l~----~~~p~~~~~~~~~ 173 (593)
++|+.|+|++|+|+ | ..|..+..+++|+.|+|++|.++ +.+|..+..++.+
T Consensus 187 ~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L 246 (386)
T 2ca6_A 187 RLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNL 246 (386)
T ss_dssp TTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTC
T ss_pred CCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCc
Confidence 89999999999997 2 34557889999999999999996 5555555555443
No 376
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.55 E-value=1.5e-14 Score=133.32 Aligned_cols=111 Identities=24% Similarity=0.281 Sum_probs=93.5
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhh
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLL 80 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 80 (593)
|+.|+|++|+++ .+|...+..+++|++|+|++|+|++..+..|.++++|+.|+|++|+|++..+..|..+++|+
T Consensus 30 l~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~----- 103 (177)
T 2o6r_A 30 ATRLELESNKLQ-SLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLK----- 103 (177)
T ss_dssp CSEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC-----
T ss_pred CcEEEeCCCccc-EeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccC-----
Confidence 689999999999 78877665699999999999999977777789999999999999999977666666666654
Q ss_pred cceeeccCCcccccCCCcccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCCC
Q 007680 81 MFGIRLTGNKLYGRIPPCLVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPI 139 (593)
Q Consensus 81 ~n~l~l~~n~l~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 139 (593)
+|++++|++++..+..|..+++|+.|++++|++++..
T Consensus 104 ----------------------~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 140 (177)
T 2o6r_A 104 ----------------------ELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 140 (177)
T ss_dssp ----------------------EEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred ----------------------EEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccC
Confidence 5577788888666666788999999999999998543
No 377
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.54 E-value=4.4e-16 Score=160.93 Aligned_cols=153 Identities=22% Similarity=0.220 Sum_probs=67.3
Q ss_pred CcEEEeeCccccccCCh----hhhhCCC-CCcEEECCCCcCcccCCccCCCC-----CCCcEEEccCCcccccccccccC
Q 007680 1 MRILTLEGNQLSGRLPS----TIGHSLP-NIEYLLLTANNLTGTIPNSITNA-----TKLIVLDLGFNSFSGHILNTFGN 70 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~----~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~~ 70 (593)
|+.|||++|+++ .++. ..+..++ +|++|+|++|+|++..+..|..+ ++|+.|+|++|++++..+..+..
T Consensus 24 L~~L~Ls~n~l~-~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~ 102 (362)
T 3goz_A 24 VTSLDLSLNNLY-SISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVK 102 (362)
T ss_dssp CCEEECTTSCGG-GSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHH
T ss_pred ceEEEccCCCCC-hHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHH
Confidence 345555555554 3332 1222244 45555555555554444444433 55555555555555444432222
Q ss_pred ----C-CCchhhhhhcceeeccCCcccccCC--------C-cccccEEEccCCcccCcC----CCCCCCCC-CCCEecCC
Q 007680 71 ----L-RHLSVLSLLMFGIRLTGNKLYGRIP--------P-CLVLTVLDVSRNQLSGDI----PSTIGGRV-DLETLSLA 131 (593)
Q Consensus 71 ----l-~~L~~L~l~~n~l~l~~n~l~~~~~--------~-~~~L~~L~l~~N~l~~~~----p~~~~~l~-~L~~L~l~ 131 (593)
+ ++|++| ++++|++++..+ . ...|++|+|++|++++.. +..+..++ +|++|+|+
T Consensus 103 ~l~~~~~~L~~L-------~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls 175 (362)
T 3goz_A 103 TLAAIPFTITVL-------DLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLR 175 (362)
T ss_dssp HHHTSCTTCCEE-------ECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECT
T ss_pred HHHhCCCCccEE-------ECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeec
Confidence 2 455555 444444432111 1 123555555555554221 11222232 45555555
Q ss_pred CccCCCCCCcccc----CC-ccccccccccccccC
Q 007680 132 SNQFQGPIPESVG----SL-ISLESLDLSGNNLSG 161 (593)
Q Consensus 132 ~N~l~~~~p~~l~----~~-~~L~~L~l~~N~l~~ 161 (593)
+|+|++..+..+. .+ ++|+.|||++|++++
T Consensus 176 ~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~ 210 (362)
T 3goz_A 176 GNNLASKNCAELAKFLASIPASVTSLDLSANLLGL 210 (362)
T ss_dssp TSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGG
T ss_pred CCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCCh
Confidence 5555543332222 22 355555555555554
No 378
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.54 E-value=2e-15 Score=135.07 Aligned_cols=123 Identities=20% Similarity=0.219 Sum_probs=102.8
Q ss_pred CCCCCcEEEccCCccc-ccccccccCCCCchhhhhhcceeeccCCcccc--cCCCcccccEEEccCCcccCcCCCCCCCC
Q 007680 46 NATKLIVLDLGFNSFS-GHILNTFGNLRHLSVLSLLMFGIRLTGNKLYG--RIPPCLVLTVLDVSRNQLSGDIPSTIGGR 122 (593)
Q Consensus 46 ~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~l~~n~l~l~~n~l~~--~~~~~~~L~~L~l~~N~l~~~~p~~~~~l 122 (593)
..++|+.|++++|.++ +.+|..+..+++|+.| ++++|++.+ .+..+..|++|++++|++++.+|..+..+
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L-------~l~~n~l~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l 87 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFL-------STINVGLTSIANLPKLNKLKKLELSDNRVSGGLEVLAEKC 87 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEE-------ECTTSCCCCCTTCCCCTTCCEEECCSSCCCSCTHHHHHHC
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEE-------ECcCCCCCCchhhhcCCCCCEEECCCCcccchHHHHhhhC
Confidence 3478999999999998 7888889999999999 677777764 45556679999999999997788888889
Q ss_pred CCCCEecCCCccCCCC-CCccccCCccccccccccccccCCCC---CCCCCCCCCCC
Q 007680 123 VDLETLSLASNQFQGP-IPESVGSLISLESLDLSGNNLSGKIP---KLEGEIPVKGS 175 (593)
Q Consensus 123 ~~L~~L~l~~N~l~~~-~p~~l~~~~~L~~L~l~~N~l~~~~p---~~~~~~~~~~~ 175 (593)
++|+.|++++|++++. .+..+..+++|+.|++++|++++.++ ..+..++.+..
T Consensus 88 ~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~ 144 (149)
T 2je0_A 88 PNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTY 144 (149)
T ss_dssp TTCCEEECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCE
T ss_pred CCCCEEECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCccc
Confidence 9999999999999853 34889999999999999999998776 45555555443
No 379
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.53 E-value=4.9e-14 Score=149.93 Aligned_cols=136 Identities=24% Similarity=0.344 Sum_probs=89.1
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhh
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLL 80 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 80 (593)
|+.|+|++|+++ .+|.. +++|++|++++|+|++ +|.. .++|++|+|++|++++ +| .|+.+++|++|
T Consensus 93 L~~L~l~~n~l~-~lp~~----~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L--- 158 (454)
T 1jl5_A 93 LESLVASCNSLT-ELPEL----PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKII--- 158 (454)
T ss_dssp CSEEECCSSCCS-SCCCC----CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEE---
T ss_pred CCEEEccCCcCC-ccccc----cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEE---
Confidence 344555555555 34421 3455555555555553 2221 1577888888888874 56 47888888887
Q ss_pred cceeeccCCcccccCCCc-ccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCCCCccccCCccccccccccccc
Q 007680 81 MFGIRLTGNKLYGRIPPC-LVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIPESVGSLISLESLDLSGNNL 159 (593)
Q Consensus 81 ~n~l~l~~n~l~~~~~~~-~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~l~~N~l 159 (593)
++++|++.+ +|.. ..|++|++++|++++ +| .++++++|+.|++++|++++ +|... ++|+.|++++|++
T Consensus 159 ----~l~~N~l~~-lp~~~~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~---~~L~~L~l~~n~l 227 (454)
T 1jl5_A 159 ----DVDNNSLKK-LPDLPPSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP---LSLESIVAGNNIL 227 (454)
T ss_dssp ----ECCSSCCSC-CCCCCTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC---TTCCEEECCSSCC
T ss_pred ----ECCCCcCcc-cCCCcccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc---CcccEEECcCCcC
Confidence 777777764 4433 358888888888875 56 57888888888888888874 55432 4788888888888
Q ss_pred cC
Q 007680 160 SG 161 (593)
Q Consensus 160 ~~ 161 (593)
+.
T Consensus 228 ~~ 229 (454)
T 1jl5_A 228 EE 229 (454)
T ss_dssp SS
T ss_pred Cc
Confidence 74
No 380
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.53 E-value=2.6e-14 Score=130.88 Aligned_cols=110 Identities=25% Similarity=0.216 Sum_probs=94.3
Q ss_pred CCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhhcceeeccCCcccccCCCcccccEE
Q 007680 25 NIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLLMFGIRLTGNKLYGRIPPCLVLTVL 104 (593)
Q Consensus 25 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~l~~n~l~~~~~~~~~L~~L 104 (593)
..+.|++++|+|+ .+|..+. ++|+.|+|++|+|++..|..|..+++|+ +|
T Consensus 10 ~~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~---------------------------~L 59 (170)
T 3g39_A 10 SGTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLT---------------------------RL 59 (170)
T ss_dssp ETTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCS---------------------------EE
T ss_pred CCCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCC---------------------------EE
Confidence 3578999999999 6787764 8899999999999988788787777665 45
Q ss_pred EccCCcccCcCCCCCCCCCCCCEecCCCccCCCCCCccccCCccccccccccccccCCCC
Q 007680 105 DVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIPESVGSLISLESLDLSGNNLSGKIP 164 (593)
Q Consensus 105 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~l~~N~l~~~~p 164 (593)
+|++|+|++..+..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|+++...+
T Consensus 60 ~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 60 DLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred ECCCCCcCccChhhccCCCCCCEEECCCCccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 778888887777778999999999999999997777789999999999999999987554
No 381
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.53 E-value=4.4e-15 Score=135.66 Aligned_cols=122 Identities=22% Similarity=0.244 Sum_probs=102.1
Q ss_pred CCCCCcEEEccCCccc-ccccccccCCCCchhhhhhcceeeccCCcccc--cCCCcccccEEEccCCcccCcCCCCCCCC
Q 007680 46 NATKLIVLDLGFNSFS-GHILNTFGNLRHLSVLSLLMFGIRLTGNKLYG--RIPPCLVLTVLDVSRNQLSGDIPSTIGGR 122 (593)
Q Consensus 46 ~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~l~~n~l~l~~n~l~~--~~~~~~~L~~L~l~~N~l~~~~p~~~~~l 122 (593)
..++|+.|+|++|.++ +.+|..+..+++|+.| ++++|.+.+ .+..+..|++|++++|++++.+|..+..+
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L-------~l~~n~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 94 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFL-------SLINVGLISVSNLPKLPKLKKLELSENRIFGGLDMLAEKL 94 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEE-------EEESSCCCCCSSCCCCSSCCEEEEESCCCCSCCCHHHHHC
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEE-------eCcCCCCCChhhhccCCCCCEEECcCCcCchHHHHHHhhC
Confidence 3478999999999998 7788889999999999 667777664 45556679999999999997788777789
Q ss_pred CCCCEecCCCccCCCCCC--ccccCCccccccccccccccCCCC---CCCCCCCCCCC
Q 007680 123 VDLETLSLASNQFQGPIP--ESVGSLISLESLDLSGNNLSGKIP---KLEGEIPVKGS 175 (593)
Q Consensus 123 ~~L~~L~l~~N~l~~~~p--~~l~~~~~L~~L~l~~N~l~~~~p---~~~~~~~~~~~ 175 (593)
++|+.|++++|+|++ +| ..+..+++|+.|++++|++++.++ ..+..++.+..
T Consensus 95 ~~L~~L~Ls~N~l~~-~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~ 151 (168)
T 2ell_A 95 PNLTHLNLSGNKLKD-ISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTY 151 (168)
T ss_dssp TTCCEEECBSSSCCS-SGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCE
T ss_pred CCCCEEeccCCccCc-chhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcE
Confidence 999999999999985 44 789999999999999999998776 45655654433
No 382
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.52 E-value=3.7e-17 Score=153.92 Aligned_cols=128 Identities=24% Similarity=0.304 Sum_probs=58.4
Q ss_pred CCCcEEECCCCcCcccCCc------cCCCCCCCcEEEccCCcccccccccccCCCCchhhhhhcceeeccCCcccccCCC
Q 007680 24 PNIEYLLLTANNLTGTIPN------SITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLLMFGIRLTGNKLYGRIPP 97 (593)
Q Consensus 24 ~~L~~L~L~~N~l~~~~p~------~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~l~~n~l~~~~~~ 97 (593)
..++.++++.|.+++..|. .|..+++|+.|+|++|++++ +| .+..+++|+.| ++++|++. .+|.
T Consensus 18 ~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L-------~l~~n~l~-~l~~ 87 (198)
T 1ds9_A 18 KSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRIL-------SLGRNLIK-KIEN 87 (198)
T ss_dssp TCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEE-------EEEEEEEC-SCSS
T ss_pred ccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEE-------ECCCCCcc-cccc
Confidence 3444444444444444443 44444444444444444443 33 44444444444 33333333 2222
Q ss_pred c----ccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCCCC--ccccCCccccccccccccccCCCC
Q 007680 98 C----LVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIP--ESVGSLISLESLDLSGNNLSGKIP 164 (593)
Q Consensus 98 ~----~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p--~~l~~~~~L~~L~l~~N~l~~~~p 164 (593)
. ..|++|++++|++++ +| .+..+++|+.|++++|++++ +| ..+..+++|+.|++++|++++..|
T Consensus 88 ~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~-~~~~~~l~~l~~L~~L~l~~N~l~~~~~ 157 (198)
T 1ds9_A 88 LDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITN-WGEIDKLAALDKLEDLLLAGNPLYNDYK 157 (198)
T ss_dssp HHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCC-HHHHHHHTTTTTCSEEEECSCHHHHHHH
T ss_pred hhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCc-hhHHHHHhcCCCCCEEEecCCccccccc
Confidence 1 125555555555553 33 34455555555555555542 22 244555555555555555554433
No 383
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.51 E-value=4.9e-14 Score=129.53 Aligned_cols=109 Identities=20% Similarity=0.176 Sum_probs=92.6
Q ss_pred CcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhhcceeeccCCcccccCCCcccccEEE
Q 007680 26 IEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLLMFGIRLTGNKLYGRIPPCLVLTVLD 105 (593)
Q Consensus 26 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~l~~n~l~~~~~~~~~L~~L~ 105 (593)
-+.+++++|+|+ .+|..+. ++|+.|+|++|+|++..|..|..+++|+. |+
T Consensus 14 ~~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~---------------------------L~ 63 (174)
T 2r9u_A 14 QTLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQ---------------------------LY 63 (174)
T ss_dssp SSEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCE---------------------------EE
T ss_pred CcEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCE---------------------------EE
Confidence 478999999998 7888775 89999999999999888888877776654 57
Q ss_pred ccCCcccCcCCCCCCCCCCCCEecCCCccCCCCCCccccCCccccccccccccccCCCC
Q 007680 106 VSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIPESVGSLISLESLDLSGNNLSGKIP 164 (593)
Q Consensus 106 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~l~~N~l~~~~p 164 (593)
|++|+|++.++..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|+|....+
T Consensus 64 Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~ 122 (174)
T 2r9u_A 64 FNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYLYNNPWDCECR 122 (174)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCBCTTBG
T ss_pred CCCCCCCccChhHhCCcchhhEEECCCCccceeCHHHhccccCCCEEEeCCCCcccccc
Confidence 77788886666678999999999999999997666679999999999999999986543
No 384
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.51 E-value=6.9e-16 Score=159.48 Aligned_cols=157 Identities=24% Similarity=0.299 Sum_probs=118.1
Q ss_pred CcEEEeeCccccccCChhhhhCC-----CCCcEEECCCCcCcccCCccCC----CC-CCCcEEEccCCccccccccccc-
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSL-----PNIEYLLLTANNLTGTIPNSIT----NA-TKLIVLDLGFNSFSGHILNTFG- 69 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~----~l-~~L~~L~L~~N~l~~~~p~~~~- 69 (593)
|+.|+|++|++++..+..+.. + ++|++|+|++|+|++..+..+. .+ ++|+.|+|++|+|++..+..+.
T Consensus 53 L~~L~Ls~N~l~~~~~~~l~~-~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~ 131 (362)
T 3goz_A 53 VTSLNLSGNSLGFKNSDELVQ-ILAAIPANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQ 131 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHH-HHHTSCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHH
T ss_pred eeEEECcCCCCCHHHHHHHHH-HHhccCCCccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHH
Confidence 689999999999555666654 4 8999999999999977666444 44 8999999999999977665544
Q ss_pred ---C-CCCchhhhhhcceeeccCCcccc----cC----CCcc-cccEEEccCCcccCcCCCCC----CCC-CCCCEecCC
Q 007680 70 ---N-LRHLSVLSLLMFGIRLTGNKLYG----RI----PPCL-VLTVLDVSRNQLSGDIPSTI----GGR-VDLETLSLA 131 (593)
Q Consensus 70 ---~-l~~L~~L~l~~n~l~l~~n~l~~----~~----~~~~-~L~~L~l~~N~l~~~~p~~~----~~l-~~L~~L~l~ 131 (593)
. .++|++| ++++|++.+ .+ .... .|++|+|++|++++..+..+ ..+ ++|+.|+|+
T Consensus 132 ~l~~~~~~L~~L-------~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls 204 (362)
T 3goz_A 132 AFSNLPASITSL-------NLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLS 204 (362)
T ss_dssp HHTTSCTTCCEE-------ECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECT
T ss_pred HHHhCCCceeEE-------EccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECC
Confidence 3 3689999 777777763 11 2222 69999999999986655433 344 589999999
Q ss_pred CccCCCC----CCccccC-CccccccccccccccCCCCC
Q 007680 132 SNQFQGP----IPESVGS-LISLESLDLSGNNLSGKIPK 165 (593)
Q Consensus 132 ~N~l~~~----~p~~l~~-~~~L~~L~l~~N~l~~~~p~ 165 (593)
+|+|++. ++..+.. .++|+.|+|++|++++..+.
T Consensus 205 ~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~ 243 (362)
T 3goz_A 205 ANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLE 243 (362)
T ss_dssp TSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCHH
T ss_pred CCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHHH
Confidence 9999852 4555655 35899999999999886653
No 385
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.50 E-value=2.3e-14 Score=156.38 Aligned_cols=120 Identities=22% Similarity=0.200 Sum_probs=97.8
Q ss_pred CCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhhcceeeccCCcccc--cCCCccccc
Q 007680 25 NIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLLMFGIRLTGNKLYG--RIPPCLVLT 102 (593)
Q Consensus 25 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~l~~n~l~~--~~~~~~~L~ 102 (593)
.|+.|+|++|+|++ +|. |+++++|+.|+|++|+|+ .+|..|+.|++|+.| +|++|++++ .+..+.+|+
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L-------~Ls~N~l~~lp~l~~l~~L~ 511 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVL-------QASDNALENVDGVANLPRLQ 511 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEE-------ECCSSCCCCCGGGTTCSSCC
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEE-------ECCCCCCCCCcccCCCCCCc
Confidence 68899999999985 676 889999999999999999 778889999999998 777777764 233445699
Q ss_pred EEEccCCcccCcC-CCCCCCCCCCCEecCCCccCCCCCCcc---ccCCcccccccc
Q 007680 103 VLDVSRNQLSGDI-PSTIGGRVDLETLSLASNQFQGPIPES---VGSLISLESLDL 154 (593)
Q Consensus 103 ~L~l~~N~l~~~~-p~~~~~l~~L~~L~l~~N~l~~~~p~~---l~~~~~L~~L~l 154 (593)
+|+|++|+|++.. |..|+++++|+.|+|++|+|++.+|.. +..+++|+.|++
T Consensus 512 ~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 512 ELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp EEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred EEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 9999999999776 899999999999999999999654422 233778888864
No 386
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.49 E-value=5.5e-14 Score=143.14 Aligned_cols=172 Identities=11% Similarity=0.083 Sum_probs=129.8
Q ss_pred CcEEEeeCcccc----------c---------cCChhhhhC--------CCCCcEEECCCCcCcccCCccCCCCCCCcEE
Q 007680 1 MRILTLEGNQLS----------G---------RLPSTIGHS--------LPNIEYLLLTANNLTGTIPNSITNATKLIVL 53 (593)
Q Consensus 1 L~~L~Ls~n~l~----------~---------~lp~~~~~~--------l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 53 (593)
|+.|||++|+|. + .||...|.+ +++|+.|+|.+ +|+.+.+.+|.++++|+.|
T Consensus 51 L~~LdLs~n~i~~~~~~~~~~~~~~~~~~~~~~I~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l 129 (329)
T 3sb4_A 51 LKVLDISNAEIKMYSGKAGTYPNGKFYIYMANFVPAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKIC 129 (329)
T ss_dssp CCEEEEEEEEECCEEESSSSSGGGCCEEECTTEECTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEE
T ss_pred CeEEecCcceeEEecCccccccccccccccccccCHHHhcccccccccccCCCcEEECCc-cccchhHHHhhcCcccceE
Confidence 789999999987 1 477788888 99999999999 8997777789999999999
Q ss_pred EccCCcccccccccccCCCCchhhhhhcceeeccCCccc-----------------------------------------
Q 007680 54 DLGFNSFSGHILNTFGNLRHLSVLSLLMFGIRLTGNKLY----------------------------------------- 92 (593)
Q Consensus 54 ~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~l~~n~l~----------------------------------------- 92 (593)
+|++|.+..+.+.+|.++.+|..+.+..+......+.+.
T Consensus 130 ~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~ 209 (329)
T 3sb4_A 130 QIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQPRDINFLTI 209 (329)
T ss_dssp EBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCCGGGCSEEEE
T ss_pred EcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCCcHHHHHhhcccCccccceEEE
Confidence 999999987778889988888777544311100000000
Q ss_pred -ccC--------C-CcccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCCCCccccCCcccc-ccccccccccC
Q 007680 93 -GRI--------P-PCLVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIPESVGSLISLE-SLDLSGNNLSG 161 (593)
Q Consensus 93 -~~~--------~-~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~-~L~l~~N~l~~ 161 (593)
+.+ . .+..|+.|+|++|+++.+.+.+|.++.+|+.|++.+| ++...+.+|.++.+|+ .|++.+ +++.
T Consensus 210 ~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~ 287 (329)
T 3sb4_A 210 EGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTA 287 (329)
T ss_dssp EECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCE
T ss_pred eeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceE
Confidence 000 0 1456889999998888666778889999999999888 7766677888888898 888887 7887
Q ss_pred CCCCCCCCCCCCCC
Q 007680 162 KIPKLEGEIPVKGS 175 (593)
Q Consensus 162 ~~p~~~~~~~~~~~ 175 (593)
+.+..|..++.+..
T Consensus 288 I~~~aF~~c~~L~~ 301 (329)
T 3sb4_A 288 IEFGAFMGCDNLRY 301 (329)
T ss_dssp ECTTTTTTCTTEEE
T ss_pred EchhhhhCCccCCE
Confidence 77787777665443
No 387
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.41 E-value=1e-13 Score=127.59 Aligned_cols=122 Identities=23% Similarity=0.197 Sum_probs=97.1
Q ss_pred ccCCCCCCCcEEEccCCcccccccccccCCC-CchhhhhhcceeeccCCcccc--cCCCcccccEEEccCCcccCcCCCC
Q 007680 42 NSITNATKLIVLDLGFNSFSGHILNTFGNLR-HLSVLSLLMFGIRLTGNKLYG--RIPPCLVLTVLDVSRNQLSGDIPST 118 (593)
Q Consensus 42 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~l~~n~l~l~~n~l~~--~~~~~~~L~~L~l~~N~l~~~~p~~ 118 (593)
..+.++.+|+.|+|++|+++. +|. +..+. +|++| ++++|.+++ .+..+..|++|++++|+|++..+..
T Consensus 13 ~~~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L-------~Ls~N~l~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~ 83 (176)
T 1a9n_A 13 AQYTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAI-------DFSDNEIRKLDGFPLLRRLKTLLVNNNRICRIGEGL 83 (176)
T ss_dssp CEEECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEE-------ECCSSCCCEECCCCCCSSCCEEECCSSCCCEECSCH
T ss_pred HhcCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEE-------ECCCCCCCcccccccCCCCCEEECCCCcccccCcch
Confidence 356788999999999999994 555 55555 99999 777777764 4556667999999999999655555
Q ss_pred CCCCCCCCEecCCCccCCCCCCc--cccCCccccccccccccccCCCCC---CCCCCCCC
Q 007680 119 IGGRVDLETLSLASNQFQGPIPE--SVGSLISLESLDLSGNNLSGKIPK---LEGEIPVK 173 (593)
Q Consensus 119 ~~~l~~L~~L~l~~N~l~~~~p~--~l~~~~~L~~L~l~~N~l~~~~p~---~~~~~~~~ 173 (593)
|..+++|+.|++++|+|+ .+|. .+..+++|+.|++++|+++..++. .+..+|.+
T Consensus 84 ~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~~~~~~~~~~~~l~~L 142 (176)
T 1a9n_A 84 DQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQV 142 (176)
T ss_dssp HHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTC
T ss_pred hhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCCcHhHHHHHHHHCCcc
Confidence 589999999999999997 6776 899999999999999999865332 24455543
No 388
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.39 E-value=5e-13 Score=137.04 Aligned_cols=103 Identities=20% Similarity=0.159 Sum_probs=78.5
Q ss_pred EEEeeCc-cccccCChhhhhCCCCCcEEECCC-CcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhh
Q 007680 3 ILTLEGN-QLSGRLPSTIGHSLPNIEYLLLTA-NNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLL 80 (593)
Q Consensus 3 ~L~Ls~n-~l~~~lp~~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 80 (593)
.++++++ +|+ .+|. +.. +++|++|+|++ |+|++..|..|.+|++|+.|+|++|+|++.+|+.|..|++|+.|
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~-~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L--- 85 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPG-AENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRL--- 85 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCS-CSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEE---
T ss_pred EEEcCCCCCCC-ccCC-CCC-CCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEE---
Confidence 4678887 888 7888 654 88888888885 88887777788888888888888888887777777777766554
Q ss_pred cceeeccCCcccccCCCcccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCC
Q 007680 81 MFGIRLTGNKLYGRIPPCLVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQ 136 (593)
Q Consensus 81 ~n~l~l~~n~l~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 136 (593)
+|++|+|++.++..|..+. |+.|+|.+|++.
T Consensus 86 ------------------------~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 86 ------------------------NLSFNALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp ------------------------ECCSSCCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred ------------------------eCCCCccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 6666667655555555555 888888888887
No 389
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.39 E-value=5.7e-15 Score=157.55 Aligned_cols=163 Identities=18% Similarity=0.166 Sum_probs=117.5
Q ss_pred CcEEEeeCcccccc----CChhhhhCCCCCcEEECCCCcCcccC-----CccCCCCCCCcEEEccCCccccc----cccc
Q 007680 1 MRILTLEGNQLSGR----LPSTIGHSLPNIEYLLLTANNLTGTI-----PNSITNATKLIVLDLGFNSFSGH----ILNT 67 (593)
Q Consensus 1 L~~L~Ls~n~l~~~----lp~~~~~~l~~L~~L~L~~N~l~~~~-----p~~~~~l~~L~~L~L~~N~l~~~----~p~~ 67 (593)
|+.|+|++|++++. ++..+.. +++|++|+|++|+|++.. +..+..+++|+.|+|++|+++.. ++..
T Consensus 201 L~~L~L~~n~l~~~~~~~l~~~l~~-~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 279 (461)
T 1z7x_W 201 LEALKLESCGVTSDNCRDLCGIVAS-KASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRV 279 (461)
T ss_dssp CCEEECTTSCCBTTHHHHHHHHHHH-CTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHH
T ss_pred ceEEEccCCCCcHHHHHHHHHHHHh-CCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHH
Confidence 68999999999842 5766665 899999999999998542 33345689999999999999854 6777
Q ss_pred ccCCCCchhhhhhcceeeccCCccccc----CC-----CcccccEEEccCCcccCc----CCCCCCCCCCCCEecCCCcc
Q 007680 68 FGNLRHLSVLSLLMFGIRLTGNKLYGR----IP-----PCLVLTVLDVSRNQLSGD----IPSTIGGRVDLETLSLASNQ 134 (593)
Q Consensus 68 ~~~l~~L~~L~l~~n~l~l~~n~l~~~----~~-----~~~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~l~~N~ 134 (593)
+..+++|++| ++++|.+.+. +. ....|++|++++|.+++. ++..+..+++|++|++++|+
T Consensus 280 l~~~~~L~~L-------~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~ 352 (461)
T 1z7x_W 280 LRAKESLKEL-------SLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNR 352 (461)
T ss_dssp HHHCTTCCEE-------ECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSB
T ss_pred HhhCCCcceE-------ECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCc
Confidence 8889999999 6666666421 11 113588888888888754 34556667888888888888
Q ss_pred CCCCCCccccC-----CccccccccccccccC----CCCCCCCCCC
Q 007680 135 FQGPIPESVGS-----LISLESLDLSGNNLSG----KIPKLEGEIP 171 (593)
Q Consensus 135 l~~~~p~~l~~-----~~~L~~L~l~~N~l~~----~~p~~~~~~~ 171 (593)
+++..+..+.. .++|+.|++++|++++ .+|..+..++
T Consensus 353 i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~ 398 (461)
T 1z7x_W 353 LEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANH 398 (461)
T ss_dssp CHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCC
T ss_pred cccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCC
Confidence 87544444432 5688888888888875 4454444333
No 390
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.38 E-value=1.2e-15 Score=143.57 Aligned_cols=147 Identities=28% Similarity=0.308 Sum_probs=119.6
Q ss_pred cEEEeeCccccccCCh------hhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCch
Q 007680 2 RILTLEGNQLSGRLPS------TIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLS 75 (593)
Q Consensus 2 ~~L~Ls~n~l~~~lp~------~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 75 (593)
+.++|+.|.+.|.+|. .+.. +++|++|+|++|+|++ +| .+.++++|+.|+|++|.++ .+|..+..+++|+
T Consensus 21 ~~l~l~~~~l~~~~~~l~~l~~~~~~-l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~ 96 (198)
T 1ds9_A 21 VATEAEKVELHGMIPPIEKMDATLST-LKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLE 96 (198)
T ss_dssp CCTTCSEEECCBCCTTCCCCHHHHHH-TTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCS
T ss_pred cCcchheeEeccccCcHhhhhHHHhc-CCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCC
Confidence 4456777777766665 7775 9999999999999995 77 8999999999999999999 6788888889999
Q ss_pred hhhhhcceeeccCCcccc--cCCCcccccEEEccCCcccCcCC-CCCCCCCCCCEecCCCccCCCCCCcc----------
Q 007680 76 VLSLLMFGIRLTGNKLYG--RIPPCLVLTVLDVSRNQLSGDIP-STIGGRVDLETLSLASNQFQGPIPES---------- 142 (593)
Q Consensus 76 ~L~l~~n~l~l~~n~l~~--~~~~~~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~~---------- 142 (593)
+| ++++|++++ .+..+..|++|++++|++++..+ ..+..+++|+.|++++|++++.+|..
T Consensus 97 ~L-------~L~~N~l~~l~~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~ 169 (198)
T 1ds9_A 97 EL-------WISYNQIASLSGIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEV 169 (198)
T ss_dssp EE-------EEEEEECCCHHHHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHH
T ss_pred EE-------ECcCCcCCcCCccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHH
Confidence 99 777777764 12234459999999999985332 46889999999999999998765553
Q ss_pred ccCCccccccccccccccC
Q 007680 143 VGSLISLESLDLSGNNLSG 161 (593)
Q Consensus 143 l~~~~~L~~L~l~~N~l~~ 161 (593)
+..+++|+.|| +|+++.
T Consensus 170 ~~~l~~L~~Ld--~~~i~~ 186 (198)
T 1ds9_A 170 VKRLPNLKKLD--GMPVDV 186 (198)
T ss_dssp HHHCSSCSEEC--CGGGTT
T ss_pred HHhCCCcEEEC--CcccCH
Confidence 78889999887 787764
No 391
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.36 E-value=2.5e-12 Score=126.30 Aligned_cols=148 Identities=14% Similarity=0.134 Sum_probs=116.6
Q ss_pred HHHhhhccccccccCccCcccEEEEEeCCCCeEEEEEeehhhHHHHHHHHHHHHHHhhcC-CCCcceeeeeeecCCceEE
Q 007680 267 IQRATDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVR-HRNLIKILSSYSNPDFKAL 345 (593)
Q Consensus 267 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~l 345 (593)
+....++|++...++.|+.+.||++... ++.+++|+...........+.+|+.+++.+. +..+.++++++...+..++
T Consensus 9 l~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~l 87 (263)
T 3tm0_A 9 LKKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNL 87 (263)
T ss_dssp HHHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEE
T ss_pred HHHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEE
Confidence 3445567988899999999999999864 6899999987542223346888999999984 6778889999988889999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcC------------------------------------
Q 007680 346 VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGH------------------------------------ 389 (593)
Q Consensus 346 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~------------------------------------ 389 (593)
||||++|.+|.+... +......++.+++++|+.||+-.
T Consensus 88 v~e~i~G~~l~~~~~------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (263)
T 3tm0_A 88 LMSEADGVLCSEEYE------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEED 161 (263)
T ss_dssp EEECCSSEEHHHHCC------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTT
T ss_pred EEEecCCeehhhccC------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccccc
Confidence 999999999987632 11234578899999999999710
Q ss_pred -------------------CCCCeEecCCCCCCeeeCCCCcEEEEeeccce
Q 007680 390 -------------------SSVHIIHCDLKPTNILLDENMVAHVSDFGIYK 421 (593)
Q Consensus 390 -------------------~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~ 421 (593)
....++|+|++|.||+++++..+.|+||+.+.
T Consensus 162 ~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 162 TPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp CSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred ccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 01458999999999999876667799999765
No 392
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.36 E-value=3e-14 Score=151.95 Aligned_cols=154 Identities=21% Similarity=0.270 Sum_probs=108.6
Q ss_pred CcEEEeeCccccc----cCChhhhhCCCCCcEEECCCCcCcccCCccCC-CCC----CCcEEEccCCcccc----ccccc
Q 007680 1 MRILTLEGNQLSG----RLPSTIGHSLPNIEYLLLTANNLTGTIPNSIT-NAT----KLIVLDLGFNSFSG----HILNT 67 (593)
Q Consensus 1 L~~L~Ls~n~l~~----~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~----~L~~L~L~~N~l~~----~~p~~ 67 (593)
|++|+|++|++++ .+|..+.. +++|++|+|++|.|+...+..+. .++ +|+.|+|++|+++. .+|..
T Consensus 30 L~~L~L~~~~l~~~~~~~l~~~l~~-~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~ 108 (461)
T 1z7x_W 30 CQVVRLDDCGLTEARCKDISSALRV-NPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSST 108 (461)
T ss_dssp CSEEEEESSCCCHHHHHHHHHHHHT-CTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHH
T ss_pred ccEEEccCCCCCHHHHHHHHHHHHh-CCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHHHH
Confidence 6789999999873 34555554 88999999999998864444332 344 69999999999884 55788
Q ss_pred ccCCCCchhhhhhcceeeccCCccccc---------CCCcccccEEEccCCcccCcC----CCCCCCCCCCCEecCCCcc
Q 007680 68 FGNLRHLSVLSLLMFGIRLTGNKLYGR---------IPPCLVLTVLDVSRNQLSGDI----PSTIGGRVDLETLSLASNQ 134 (593)
Q Consensus 68 ~~~l~~L~~L~l~~n~l~l~~n~l~~~---------~~~~~~L~~L~l~~N~l~~~~----p~~~~~l~~L~~L~l~~N~ 134 (593)
|..+++|++| ++++|.+.+. ......|++|++++|++++.. +..+..+++|++|++++|+
T Consensus 109 l~~~~~L~~L-------~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~ 181 (461)
T 1z7x_W 109 LRTLPTLQEL-------HLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNND 181 (461)
T ss_dssp TTSCTTCCEE-------ECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSB
T ss_pred HccCCceeEE-------ECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCC
Confidence 8899999998 6667766521 112335888888888887532 4455667788888888888
Q ss_pred CCCCCCcccc-----CCccccccccccccccCC
Q 007680 135 FQGPIPESVG-----SLISLESLDLSGNNLSGK 162 (593)
Q Consensus 135 l~~~~p~~l~-----~~~~L~~L~l~~N~l~~~ 162 (593)
+++..+..+. ..++|+.|++++|.+++.
T Consensus 182 i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~ 214 (461)
T 1z7x_W 182 INEAGVRVLCQGLKDSPCQLEALKLESCGVTSD 214 (461)
T ss_dssp CHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTT
T ss_pred cchHHHHHHHHHHhcCCCCceEEEccCCCCcHH
Confidence 7644333333 245788888888887763
No 393
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.33 E-value=1.7e-12 Score=133.02 Aligned_cols=105 Identities=24% Similarity=0.226 Sum_probs=89.7
Q ss_pred cEEECCCC-cCcccCCccCCCCCCCcEEEccC-CcccccccccccCCCCchhhhhhcceeeccCCcccccCCCcccccEE
Q 007680 27 EYLLLTAN-NLTGTIPNSITNATKLIVLDLGF-NSFSGHILNTFGNLRHLSVLSLLMFGIRLTGNKLYGRIPPCLVLTVL 104 (593)
Q Consensus 27 ~~L~L~~N-~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~l~~n~l~l~~n~l~~~~~~~~~L~~L 104 (593)
..+++++| +|+ .+|. |..+++|+.|+|++ |+|++..|+.|+.|++|+. |
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~---------------------------L 61 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRN---------------------------L 61 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSE---------------------------E
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCE---------------------------E
Confidence 45799998 899 5888 99999999999996 9999877788887777654 5
Q ss_pred EccCCcccCcCCCCCCCCCCCCEecCCCccCCCCCCccccCCccccccccccccccC
Q 007680 105 DVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIPESVGSLISLESLDLSGNNLSG 161 (593)
Q Consensus 105 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~l~~N~l~~ 161 (593)
+|++|+|++.+|..|.++++|+.|+|++|+|++..+..+..+. |+.|+|++|+|..
T Consensus 62 ~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 62 TIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp ECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred ECCCCccceeCHHHhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 7788888888888999999999999999999976666666665 9999999999985
No 394
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.25 E-value=1e-13 Score=143.27 Aligned_cols=158 Identities=19% Similarity=0.210 Sum_probs=113.7
Q ss_pred CcEEEeeCccccccCChhhhh----CCCCCcEEECCCCcCcccCCccCC-CCCCCcEEEccCCcccccccccc-----cC
Q 007680 1 MRILTLEGNQLSGRLPSTIGH----SLPNIEYLLLTANNLTGTIPNSIT-NATKLIVLDLGFNSFSGHILNTF-----GN 70 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~----~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~-----~~ 70 (593)
|+.|+|++|.|++.-...+.. ..++|++|+|++|.|+......+. .+++|+.|+|++|.|+......+ ..
T Consensus 74 L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~ 153 (372)
T 3un9_A 74 LRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHD 153 (372)
T ss_dssp CCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHST
T ss_pred CCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhc
Confidence 678999999998433333332 236899999999999754444443 46789999999999986544444 34
Q ss_pred CCCchhhhhhcceeeccCCcccc--------cCCCcccccEEEccCCcccCc----CCCCCCCCCCCCEecCCCccCCCC
Q 007680 71 LRHLSVLSLLMFGIRLTGNKLYG--------RIPPCLVLTVLDVSRNQLSGD----IPSTIGGRVDLETLSLASNQFQGP 138 (593)
Q Consensus 71 l~~L~~L~l~~n~l~l~~n~l~~--------~~~~~~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~ 138 (593)
.++|++| +|++|.++. .+....+|++|+|++|.|+.. ++..+...++|+.|+|++|+|+..
T Consensus 154 ~~~L~~L-------~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~ 226 (372)
T 3un9_A 154 QCQITTL-------RLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDT 226 (372)
T ss_dssp TCCCCEE-------ECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHH
T ss_pred CCcccee-------eCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHH
Confidence 6789998 777777752 223455699999999998742 245566778899999999999742
Q ss_pred ----CCccccCCccccccccccccccCCCCC
Q 007680 139 ----IPESVGSLISLESLDLSGNNLSGKIPK 165 (593)
Q Consensus 139 ----~p~~l~~~~~L~~L~l~~N~l~~~~p~ 165 (593)
++..+..+++|++|||++|++++....
T Consensus 227 g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~ 257 (372)
T 3un9_A 227 AALALARAAREHPSLELLHLYFNELSSEGRQ 257 (372)
T ss_dssp HHHHHHHHHHHCSSCCEEECTTSSCCHHHHH
T ss_pred HHHHHHHHHHhCCCCCEEeccCCCCCHHHHH
Confidence 344556678899999999999864433
No 395
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.24 E-value=1.2e-11 Score=125.75 Aligned_cols=164 Identities=12% Similarity=0.087 Sum_probs=132.1
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcc----ccccccccc-------
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSF----SGHILNTFG------- 69 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l----~~~~p~~~~------- 69 (593)
|+.|+|.+ +++ .|+...|.++++|+.|+|++|.++...+.+|.++.++..+.+..+.. .......|.
T Consensus 103 L~~l~L~~-~i~-~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~ 180 (329)
T 3sb4_A 103 LEKVILSE-KIK-NIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLET 180 (329)
T ss_dssp CCC-CBCT-TCC-EECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEE
T ss_pred CcEEECCc-ccc-chhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccce
Confidence 67889998 898 89999888899999999999999877788899988888888776332 111111111
Q ss_pred -------------------------------------------CCCCchhhhhhcceeeccCCccc----ccCCCccccc
Q 007680 70 -------------------------------------------NLRHLSVLSLLMFGIRLTGNKLY----GRIPPCLVLT 102 (593)
Q Consensus 70 -------------------------------------------~l~~L~~L~l~~n~l~l~~n~l~----~~~~~~~~L~ 102 (593)
.+++|+.| ++++|+++ +++..+..|+
T Consensus 181 ~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l-------~L~~n~i~~I~~~aF~~~~~L~ 253 (329)
T 3sb4_A 181 TIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSL-------DISKTNATTIPDFTFAQKKYLL 253 (329)
T ss_dssp EEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEE-------ECTTBCCCEECTTTTTTCTTCC
T ss_pred eEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEE-------ECCCCCcceecHhhhhCCCCCC
Confidence 26677777 77777776 3566677899
Q ss_pred EEEccCCcccCcCCCCCCCCCCCC-EecCCCccCCCCCCccccCCccccccccccccccCCCCCCCCCCCCCCC
Q 007680 103 VLDVSRNQLSGDIPSTIGGRVDLE-TLSLASNQFQGPIPESVGSLISLESLDLSGNNLSGKIPKLEGEIPVKGS 175 (593)
Q Consensus 103 ~L~l~~N~l~~~~p~~~~~l~~L~-~L~l~~N~l~~~~p~~l~~~~~L~~L~l~~N~l~~~~p~~~~~~~~~~~ 175 (593)
.|+|++| ++.+.+.+|.++.+|+ .|++.+ +++...+.+|.+|++|+.|++++|+++.+.+..|..++.++.
T Consensus 254 ~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ 325 (329)
T 3sb4_A 254 KIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKL 325 (329)
T ss_dssp EEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCE
T ss_pred EEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhh
Confidence 9999999 8867788999999999 999999 777677899999999999999999999999998888776543
No 396
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.20 E-value=2.6e-11 Score=118.60 Aligned_cols=140 Identities=15% Similarity=0.113 Sum_probs=103.0
Q ss_pred hhccccccccCccCcccEEEEEeCCCCeEEEEEeehhhHHHHHHHHHHHHHHhhcCCCC--cceeeeeeecCCceEEEEe
Q 007680 271 TDEFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRN--LIKILSSYSNPDFKALVLE 348 (593)
Q Consensus 271 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~~~~~lv~e 348 (593)
..++.+....+.|..+.||++...+|+.+++|+.... ....+..|+.+++.+.+.+ +.+++++...++..++|||
T Consensus 19 ~~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e 95 (264)
T 1nd4_A 19 LFGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLG 95 (264)
T ss_dssp TTTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEE
T ss_pred cCCCceEecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEE
Confidence 3455554444466679999998777888999997653 2245778999999985444 5568888888888999999
Q ss_pred ccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCC--------------------------------------
Q 007680 349 FMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHS-------------------------------------- 390 (593)
Q Consensus 349 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~-------------------------------------- 390 (593)
|++|.++. ... .+ ...++.++++.|..||+...
T Consensus 96 ~i~G~~l~--~~~----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (264)
T 1nd4_A 96 EVPGQDLL--SSH----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLA 166 (264)
T ss_dssp CCSSEETT--TSC----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCC
T ss_pred ecCCcccC--cCc----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCcc
Confidence 99998884 211 11 23567888888888885320
Q ss_pred ----------------CCCeEecCCCCCCeeeCCCCcEEEEeecccee
Q 007680 391 ----------------SVHIIHCDLKPTNILLDENMVAHVSDFGIYKL 422 (593)
Q Consensus 391 ----------------~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~ 422 (593)
...++|+|++|.||++++++.+.|+|||.+..
T Consensus 167 ~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 167 PAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp HHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 12399999999999998876677999998653
No 397
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.10 E-value=1.2e-12 Score=135.20 Aligned_cols=137 Identities=17% Similarity=0.143 Sum_probs=103.5
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccC-----CCCCCCcEEEccCCcccc----cccccccCC
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSI-----TNATKLIVLDLGFNSFSG----HILNTFGNL 71 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~-----~~l~~L~~L~L~~N~l~~----~~p~~~~~l 71 (593)
|+.|+|++|.|++.-...+...+++|+.|+|++|+|+......+ ...++|+.|+|++|.|+. .++..+..+
T Consensus 103 L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~ 182 (372)
T 3un9_A 103 LDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGN 182 (372)
T ss_dssp EEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTC
T ss_pred ceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcC
Confidence 57899999999855455555567899999999999985544444 357899999999999975 345556889
Q ss_pred CCchhhhhhcceeeccCCcccc--------cCCCcccccEEEccCCcccCc----CCCCCCCCCCCCEecCCCccCCCCC
Q 007680 72 RHLSVLSLLMFGIRLTGNKLYG--------RIPPCLVLTVLDVSRNQLSGD----IPSTIGGRVDLETLSLASNQFQGPI 139 (593)
Q Consensus 72 ~~L~~L~l~~n~l~l~~n~l~~--------~~~~~~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~~ 139 (593)
++|++| +|++|.+.+ .+....+|++|+|++|.|+.. ++..+...++|++|+|++|.|+...
T Consensus 183 ~~L~~L-------~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g 255 (372)
T 3un9_A 183 TSVTHL-------SLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEG 255 (372)
T ss_dssp SSCCEE-------ECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHH
T ss_pred CCcCEE-------eCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHH
Confidence 999999 777777762 344455799999999999743 3334556789999999999998543
Q ss_pred Ccccc
Q 007680 140 PESVG 144 (593)
Q Consensus 140 p~~l~ 144 (593)
...+.
T Consensus 256 ~~~L~ 260 (372)
T 3un9_A 256 RQVLR 260 (372)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 33343
No 398
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.05 E-value=6.6e-10 Score=115.82 Aligned_cols=163 Identities=12% Similarity=0.063 Sum_probs=115.5
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhh
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLL 80 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 80 (593)
|+.++|.. .+. .|+...|.++++|+.++|++|+++.+.+.+|. ..+|+.+.|.+| ++.+...+|.+|++|+.+++.
T Consensus 159 L~~i~lp~-~l~-~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~ 234 (401)
T 4fdw_A 159 VQEIVFPS-TLE-QLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIP 234 (401)
T ss_dssp CCEEECCT-TCC-EECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECC
T ss_pred ceEEEeCC-Ccc-EehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecC
Confidence 45666664 666 67777676777888888888777744444555 577777777744 664556677777777777664
Q ss_pred cce---------------eeccCCccc----ccCCCcccccEEEccCCccc-----CcCCCCCCCCCCCCEecCCCccCC
Q 007680 81 MFG---------------IRLTGNKLY----GRIPPCLVLTVLDVSRNQLS-----GDIPSTIGGRVDLETLSLASNQFQ 136 (593)
Q Consensus 81 ~n~---------------l~l~~n~l~----~~~~~~~~L~~L~l~~N~l~-----~~~p~~~~~l~~L~~L~l~~N~l~ 136 (593)
.|- +.+ .|.+. +++..|..|+.+++.+|.+. .+.+.+|.+|++|+.+++. |.++
T Consensus 235 ~~l~~I~~~aF~~~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~ 312 (401)
T 4fdw_A 235 ENVSTIGQEAFRESGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIR 312 (401)
T ss_dssp TTCCEECTTTTTTCCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCC
T ss_pred CCccCccccccccCCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceE
Confidence 322 122 12222 35566778999999998775 4567889999999999999 4577
Q ss_pred CCCCccccCCccccccccccccccCCCCCCCCCC
Q 007680 137 GPIPESVGSLISLESLDLSGNNLSGKIPKLEGEI 170 (593)
Q Consensus 137 ~~~p~~l~~~~~L~~L~l~~N~l~~~~p~~~~~~ 170 (593)
.....+|.+|.+|+.|+|..| ++.+.+..|..+
T Consensus 313 ~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~ 345 (401)
T 4fdw_A 313 ILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT 345 (401)
T ss_dssp EECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS
T ss_pred EEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC
Confidence 667788999999999999655 777777777655
No 399
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.04 E-value=3.7e-12 Score=140.21 Aligned_cols=156 Identities=17% Similarity=0.127 Sum_probs=98.7
Q ss_pred CcEEEee-----------CccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCC-CCCCcEEEcc----CCccccc-
Q 007680 1 MRILTLE-----------GNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITN-ATKLIVLDLG----FNSFSGH- 63 (593)
Q Consensus 1 L~~L~Ls-----------~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-l~~L~~L~L~----~N~l~~~- 63 (593)
|+.|+|+ .|.+++.-...+...+++|++|+|+.|++++..+..+.. +++|+.|+|+ .|.+++.
T Consensus 344 L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p 423 (592)
T 3ogk_B 344 LKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLP 423 (592)
T ss_dssp CCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCC
T ss_pred CCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCch
Confidence 5667777 355653322333334777777777777777665555554 7777777775 6677643
Q ss_pred ----ccccccCCCCchhhhhhcceeeccC--Cccccc----C-CCcccccEEEccCCcccC-cCCCCCCCCCCCCEecCC
Q 007680 64 ----ILNTFGNLRHLSVLSLLMFGIRLTG--NKLYGR----I-PPCLVLTVLDVSRNQLSG-DIPSTIGGRVDLETLSLA 131 (593)
Q Consensus 64 ----~p~~~~~l~~L~~L~l~~n~l~l~~--n~l~~~----~-~~~~~L~~L~l~~N~l~~-~~p~~~~~l~~L~~L~l~ 131 (593)
++..+..+++|+.| +++. |.+++. + ..+..|++|++++|++++ .++..+.++++|+.|+|+
T Consensus 424 ~~~~~~~~~~~~~~L~~L-------~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~ 496 (592)
T 3ogk_B 424 LDNGVRSLLIGCKKLRRF-------AFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMR 496 (592)
T ss_dssp CHHHHHHHHHHCTTCCEE-------EEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEE
T ss_pred HHHHHHHHHHhCCCCCEE-------EEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeecc
Confidence 33335667777777 4432 123311 1 124458888888888875 244445678888888888
Q ss_pred CccCCCC-CCccccCCccccccccccccccCCC
Q 007680 132 SNQFQGP-IPESVGSLISLESLDLSGNNLSGKI 163 (593)
Q Consensus 132 ~N~l~~~-~p~~l~~~~~L~~L~l~~N~l~~~~ 163 (593)
+|++++. ++..+..+++|+.|++++|++++..
T Consensus 497 ~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~~ 529 (592)
T 3ogk_B 497 GCCFSERAIAAAVTKLPSLRYLWVQGYRASMTG 529 (592)
T ss_dssp SCCCBHHHHHHHHHHCSSCCEEEEESCBCCTTC
T ss_pred CCCCcHHHHHHHHHhcCccCeeECcCCcCCHHH
Confidence 8887643 3444556788888888888887653
No 400
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.02 E-value=1.1e-11 Score=136.43 Aligned_cols=152 Identities=16% Similarity=0.118 Sum_probs=87.9
Q ss_pred CcEEEeeCcc-ccc-cCChhhhhCCCCCcEEECCCCcCccc----CCccCCCCCCCcEEEccCCccc----ccccccccC
Q 007680 1 MRILTLEGNQ-LSG-RLPSTIGHSLPNIEYLLLTANNLTGT----IPNSITNATKLIVLDLGFNSFS----GHILNTFGN 70 (593)
Q Consensus 1 L~~L~Ls~n~-l~~-~lp~~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~----~~~p~~~~~ 70 (593)
|+.|+|++|. ++. .++.-. ..+++|++|+|++|.+++. ++..+.++++|+.|+|++|.++ +.++..+..
T Consensus 140 L~~L~L~~~~~~~~~~l~~~~-~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~ 218 (592)
T 3ogk_B 140 LETLKLDKCSGFTTDGLLSIV-THCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARN 218 (592)
T ss_dssp CCEEEEESCEEEEHHHHHHHH-HHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHH
T ss_pred CcEEECcCCCCcCHHHHHHHH-hhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhh
Confidence 5777887776 221 122222 2377888888888877654 2333456777788888887776 233444566
Q ss_pred CCCchhhhhhcceeeccCCcccc---cCCCcccccEEEccCCccc---CcCCCCCCCCCCCCEecCCCccCCCCCCcccc
Q 007680 71 LRHLSVLSLLMFGIRLTGNKLYG---RIPPCLVLTVLDVSRNQLS---GDIPSTIGGRVDLETLSLASNQFQGPIPESVG 144 (593)
Q Consensus 71 l~~L~~L~l~~n~l~l~~n~l~~---~~~~~~~L~~L~l~~N~l~---~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~ 144 (593)
+++|++| ++++|.+.+ .+..+.+|++|+++.+... +..+..+..+++|+.|+++++... .+|..+.
T Consensus 219 ~~~L~~L-------~L~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~-~l~~~~~ 290 (592)
T 3ogk_B 219 CRSLVSV-------KVGDFEILELVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPN-EMPILFP 290 (592)
T ss_dssp CTTCCEE-------ECSSCBGGGGHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTT-TGGGGGG
T ss_pred CCCCcEE-------eccCccHHHHHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccchh-HHHHHHh
Confidence 7777777 555555543 1222334667776643322 123344555666666666665443 4566666
Q ss_pred CCccccccccccccccC
Q 007680 145 SLISLESLDLSGNNLSG 161 (593)
Q Consensus 145 ~~~~L~~L~l~~N~l~~ 161 (593)
.+++|+.|++++|.+++
T Consensus 291 ~~~~L~~L~Ls~~~l~~ 307 (592)
T 3ogk_B 291 FAAQIRKLDLLYALLET 307 (592)
T ss_dssp GGGGCCEEEETTCCCCH
T ss_pred hcCCCcEEecCCCcCCH
Confidence 66666666666666543
No 401
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.00 E-value=1.1e-09 Score=112.74 Aligned_cols=143 Identities=13% Similarity=0.152 Sum_probs=107.3
Q ss_pred cccccCccCcccEEEEEeCCCCeEEEEEee--hhh-HHHHHHHHHHHHHHhhcC--CCCcceeeeeeecC---CceEEEE
Q 007680 276 ECNLLGTSSFGSVYKGTISDGTDVAIKVFN--LQL-ERAFRSFDSECEVLRNVR--HRNLIKILSSYSNP---DFKALVL 347 (593)
Q Consensus 276 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~--~~~-~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~---~~~~lv~ 347 (593)
..+.++.|.++.||++... +..+++|+.. ... ......+.+|..+++.+. +..+.+++.++.+. +..++||
T Consensus 42 ~~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm 120 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM 120 (359)
T ss_dssp EEEECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred eEEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence 4568999999999999875 4678899876 332 123356788999999996 45678888888776 4589999
Q ss_pred eccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCC-------------------------------------
Q 007680 348 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHS------------------------------------- 390 (593)
Q Consensus 348 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~------------------------------------- 390 (593)
||++|.++.+.. ...++..+...++.++++.|..||+...
T Consensus 121 e~v~G~~l~~~~---~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (359)
T 3dxp_A 121 EFVSGRVLWDQS---LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAM 197 (359)
T ss_dssp ECCCCBCCCCTT---CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHH
T ss_pred EecCCeecCCCc---cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHH
Confidence 999998775421 1136788889999999999999997310
Q ss_pred -----------------CCCeEecCCCCCCeeeCCCCc--EEEEeecccee
Q 007680 391 -----------------SVHIIHCDLKPTNILLDENMV--AHVSDFGIYKL 422 (593)
Q Consensus 391 -----------------~~~ivH~Dlkp~NIll~~~~~--~kL~Dfg~a~~ 422 (593)
...++|||++|.||+++.++. +.|+||+.+..
T Consensus 198 ~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 198 DSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 246999999999999997753 68999998875
No 402
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.97 E-value=2.9e-10 Score=114.06 Aligned_cols=188 Identities=15% Similarity=0.127 Sum_probs=124.4
Q ss_pred ccccCccCcccEEEEEeCCCCeEEEEEeehhhHHHHHHHHHHHHHHhhcC-CCC--cceeeeeeecCC---ceEEEEecc
Q 007680 277 CNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVR-HRN--LIKILSSYSNPD---FKALVLEFM 350 (593)
Q Consensus 277 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~n--iv~l~~~~~~~~---~~~lv~e~~ 350 (593)
.+.++.|.+..||++. ..+++|+.... .....+.+|.++++.+. +.. +.+++......+ ..|+|||++
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i 98 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI 98 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence 4568999999999863 56899986543 33467889999998883 332 344555443333 358899999
Q ss_pred CCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcC-----------------------------------------
Q 007680 351 PNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGH----------------------------------------- 389 (593)
Q Consensus 351 ~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~----------------------------------------- 389 (593)
+|.++.+.... .++..++..++.++++.++.||+..
T Consensus 99 ~G~~l~~~~~~---~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 175 (304)
T 3sg8_A 99 KGVPLTPLLLN---NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDD 175 (304)
T ss_dssp CCEECCHHHHH---TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHH
T ss_pred CCeECCccccc---cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHH
Confidence 99888764332 2677888889999999999998611
Q ss_pred -------------CCCCeEecCCCCCCeeeCC--CCcEEEEeeccceecCCCCCccccccccCCccccCccccCC-----
Q 007680 390 -------------SSVHIIHCDLKPTNILLDE--NMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLE----- 449 (593)
Q Consensus 390 -------------~~~~ivH~Dlkp~NIll~~--~~~~kL~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----- 449 (593)
....++|+|++|.||++++ ...+.++||+.+..-....+....... . .-..|+....
T Consensus 176 ~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~--~-~~~~~~~~~~~l~~Y 252 (304)
T 3sg8_A 176 FYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMED--D-EEYGMEFVSKILNHY 252 (304)
T ss_dssp HHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCT--T-TSCCHHHHHHHHHHH
T ss_pred HHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhh--c-cccCHHHHHHHHHHc
Confidence 0135899999999999998 556889999988754221110000000 0 0012221110
Q ss_pred CC---------CCccchHHHHHHHHHHHHhCCCCCC
Q 007680 450 GI---------VSAKCDVYSYGVLLMETFTRKRPTD 476 (593)
Q Consensus 450 ~~---------~s~~~DvwSlGvvl~elltg~~pf~ 476 (593)
+. .....+.|++|.++|.+.+|..+|.
T Consensus 253 ~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~~ 288 (304)
T 3sg8_A 253 KHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDWY 288 (304)
T ss_dssp TCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 00 1123689999999999999988763
No 403
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.95 E-value=2.3e-09 Score=111.68 Aligned_cols=148 Identities=11% Similarity=0.088 Sum_probs=95.7
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhh
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLL 80 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 80 (593)
|+.++|..| +. .|+...|.+ .+|+.+.|.+ .++.+.+.+|.++++|+.++|++|.++.+....|. +.+|+.+.|.
T Consensus 137 L~~i~l~~~-i~-~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp 211 (401)
T 4fdw_A 137 IAKVVLNEG-LK-SIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLP 211 (401)
T ss_dssp CSEEECCTT-CC-EECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECC
T ss_pred ccEEEeCCC-cc-EECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeC
Confidence 567888776 87 899888875 5899999996 77867778999999999999999999966566676 6899998443
Q ss_pred cceeeccCCcccccCCCcccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCCCCccccCCcccccccccccccc
Q 007680 81 MFGIRLTGNKLYGRIPPCLVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIPESVGSLISLESLDLSGNNLS 160 (593)
Q Consensus 81 ~n~l~l~~n~l~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~l~~N~l~ 160 (593)
.+--.+.. +++..+..|+.+++..| ++.+-..+|.+ .+|+.+.+ .|.++...+.+|.+|++|+.+++.+|.+.
T Consensus 212 ~~l~~I~~----~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~ 284 (401)
T 4fdw_A 212 VTLKEIGS----QAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFN 284 (401)
T ss_dssp TTCCEECT----TTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCC
T ss_pred Cchheehh----hHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCcccc
Confidence 22111111 24445555666666654 33333444444 44555555 23343333445555555555555554443
No 404
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.83 E-value=1.5e-10 Score=127.35 Aligned_cols=55 Identities=22% Similarity=0.165 Sum_probs=27.0
Q ss_pred CCCCcEEECCCCcCcccCCccCC-CCCCCcEEEccCC-ccccc-ccccccCCCCchhh
Q 007680 23 LPNIEYLLLTANNLTGTIPNSIT-NATKLIVLDLGFN-SFSGH-ILNTFGNLRHLSVL 77 (593)
Q Consensus 23 l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~L~~N-~l~~~-~p~~~~~l~~L~~L 77 (593)
+++|++|+|++|.+++..+..+. .+++|+.|+|++| .++.. ++..+..+++|++|
T Consensus 104 ~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L 161 (594)
T 2p1m_B 104 YTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKEL 161 (594)
T ss_dssp CTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEE
T ss_pred CCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEE
Confidence 55555555555555544444443 3555555555555 33321 22333345555555
No 405
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.72 E-value=8.3e-08 Score=96.82 Aligned_cols=137 Identities=18% Similarity=0.232 Sum_probs=103.2
Q ss_pred ccccccccCccCcccEEEEEeCCCCeEEEEEeehhhHHHHHHHHHHHHHHhhcCC----CCcceeeeeeecCCceEEEEe
Q 007680 273 EFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRH----RNLIKILSSYSNPDFKALVLE 348 (593)
Q Consensus 273 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~l~~~~~~~~~~~lv~e 348 (593)
.+...+.++.|..+.||++ |+.+++|+..... ....+.+|..+++.+.+ ..+.+++++ +..++|||
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~~--~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme 107 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRDS--VRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMK 107 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSHH--HHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcHH--HHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEe
Confidence 4556778999999999998 6789999875432 23458899999988865 224445554 56789999
Q ss_pred ccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-------------------------------------
Q 007680 349 FMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSS------------------------------------- 391 (593)
Q Consensus 349 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~------------------------------------- 391 (593)
|++|.++.+.... .++..+...++.++++.++.||+....
T Consensus 108 ~i~G~~l~~~~~~---~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (320)
T 3r70_A 108 YIKGERITYEQYH---KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDE 184 (320)
T ss_dssp CCCCBCCCHHHHT---TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHH
T ss_pred ecCCccccccccc---cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhccccccc
Confidence 9999988743321 267777888888888888888854321
Q ss_pred ----------------------CCeEecCCCCCCeeeCCCCcEEEEeecccee
Q 007680 392 ----------------------VHIIHCDLKPTNILLDENMVAHVSDFGIYKL 422 (593)
Q Consensus 392 ----------------------~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~ 422 (593)
..++|+|++|.||+++.+..+.++||+.+..
T Consensus 185 ~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 185 MLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp HHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred chHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 2359999999999999976679999998764
No 406
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.65 E-value=4.2e-09 Score=107.86 Aligned_cols=156 Identities=15% Similarity=0.157 Sum_probs=93.0
Q ss_pred CcEEEeeCcccc---------ccCChhhhhCCCCCcEEECCCCc-CcccCCccCCCCCCCcEEEccCCccccccccccc-
Q 007680 1 MRILTLEGNQLS---------GRLPSTIGHSLPNIEYLLLTANN-LTGTIPNSITNATKLIVLDLGFNSFSGHILNTFG- 69 (593)
Q Consensus 1 L~~L~Ls~n~l~---------~~lp~~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~- 69 (593)
|+.|.+..+... +.++.-+ ..+|+|+.|+|++|. ++ ++. +. +++|+.|+|..|.++......+.
T Consensus 141 L~~L~l~~~~~e~~~is~~~~~~L~~ll-~~~P~L~~L~L~g~~~l~--l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~ 215 (362)
T 2ra8_A 141 FEGLFWGDIDFEEQEISWIEQVDLSPVL-DAMPLLNNLKIKGTNNLS--IGK-KP-RPNLKSLEIISGGLPDSVVEDILG 215 (362)
T ss_dssp CSEEEECCCCTTTCCGGGCBCCBCHHHH-HTCTTCCEEEEECCBTCB--CCS-CB-CTTCSEEEEECSBCCHHHHHHHHH
T ss_pred hhheeecCcchhhcccccccccCHHHHH-hcCCCCcEEEEeCCCCce--ecc-cc-CCCCcEEEEecCCCChHHHHHHHH
Confidence 566777654321 1233333 347888888888873 32 333 43 78888888888887654444454
Q ss_pred -CCCCchhhhhhcceeeccCC-cc---cccCC--CcccccEEEccCCcccCcCCCCC---CCCCCCCEecCCCccCCCC-
Q 007680 70 -NLRHLSVLSLLMFGIRLTGN-KL---YGRIP--PCLVLTVLDVSRNQLSGDIPSTI---GGRVDLETLSLASNQFQGP- 138 (593)
Q Consensus 70 -~l~~L~~L~l~~n~l~l~~n-~l---~~~~~--~~~~L~~L~l~~N~l~~~~p~~~---~~l~~L~~L~l~~N~l~~~- 138 (593)
.+++|++|+|+.+.-...++ .+ ...+. .+.+|++|+|++|.+....+..+ ..+++|+.|+|+.|.|++.
T Consensus 216 ~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G 295 (362)
T 2ra8_A 216 SDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEG 295 (362)
T ss_dssp SBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHH
T ss_pred ccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHH
Confidence 67888888553110000011 01 11111 23468888888888764322112 2467888888888888743
Q ss_pred ---CCccccCCccccccccccccccC
Q 007680 139 ---IPESVGSLISLESLDLSGNNLSG 161 (593)
Q Consensus 139 ---~p~~l~~~~~L~~L~l~~N~l~~ 161 (593)
++..+..+++|+.|++++|.++.
T Consensus 296 ~~~L~~~L~~l~~L~~L~L~~n~i~d 321 (362)
T 2ra8_A 296 ARLLLDHVDKIKHLKFINMKYNYLSD 321 (362)
T ss_dssp HHHHHTTHHHHTTCSEEECCSBBCCH
T ss_pred HHHHHhhcccCCcceEEECCCCcCCH
Confidence 33444567888888888888764
No 407
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.64 E-value=5.2e-10 Score=122.96 Aligned_cols=157 Identities=17% Similarity=0.121 Sum_probs=75.7
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEEC---------CCCcCcccCCccCC-CCCCCcEEEccCCccccccccccc-
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLL---------TANNLTGTIPNSIT-NATKLIVLDLGFNSFSGHILNTFG- 69 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L---------~~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~- 69 (593)
|+.|+|++| +.+.....+...+++|++|+| +.|.+++.....+. ++++|+.|+++.|.+++..+..+.
T Consensus 316 L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~ 394 (594)
T 2p1m_B 316 LQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIAR 394 (594)
T ss_dssp CCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHH
T ss_pred cCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHh
Confidence 567777777 442222233334677777776 33455533222232 366677777777777655544444
Q ss_pred CCCCchhhhhhcceeeccCCcccc---------cCCCcccccEEEccCCcccCcCCCCCCC-CCCCCEecCCCccCCCCC
Q 007680 70 NLRHLSVLSLLMFGIRLTGNKLYG---------RIPPCLVLTVLDVSRNQLSGDIPSTIGG-RVDLETLSLASNQFQGPI 139 (593)
Q Consensus 70 ~l~~L~~L~l~~n~l~l~~n~l~~---------~~~~~~~L~~L~l~~N~l~~~~p~~~~~-l~~L~~L~l~~N~l~~~~ 139 (593)
.+++|+.|+|+.+..+ .-|.+++ .+..+..|+.|++++ .+++..+..++. +++|+.|+|++|.+++..
T Consensus 395 ~~~~L~~L~L~~~~~~-~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~ 472 (594)
T 2p1m_B 395 NRPNMTRFRLCIIEPK-APDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLG 472 (594)
T ss_dssp HCTTCCEEEEEESSTT-CCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHH
T ss_pred hCCCcceeEeecccCC-CcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHH
Confidence 3666766633310000 0022321 011223466666654 343332223332 455666666666554332
Q ss_pred Cccc-cCCcccccccccccccc
Q 007680 140 PESV-GSLISLESLDLSGNNLS 160 (593)
Q Consensus 140 p~~l-~~~~~L~~L~l~~N~l~ 160 (593)
+..+ ..+++|+.|++++|+++
T Consensus 473 ~~~l~~~~~~L~~L~L~~n~~~ 494 (594)
T 2p1m_B 473 MHHVLSGCDSLRKLEIRDCPFG 494 (594)
T ss_dssp HHHHHHHCTTCCEEEEESCSCC
T ss_pred HHHHHhcCCCcCEEECcCCCCc
Confidence 2222 34555666666666654
No 408
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.52 E-value=6.7e-07 Score=89.50 Aligned_cols=137 Identities=14% Similarity=0.078 Sum_probs=97.5
Q ss_pred ccccCccCcccEEEEEeCCCCeEEEEEeehhhHHHHHHHHHHHHHHhhcCCC---Ccceeeeeee-cCCceEEEEeccCC
Q 007680 277 CNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHR---NLIKILSSYS-NPDFKALVLEFMPN 352 (593)
Q Consensus 277 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~-~~~~~~lv~e~~~~ 352 (593)
.+.++.|....||+. |..+++|+.... .....+.+|.++++.+.+. .+.+++.+.. ..+..++|||+++|
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~~--~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKSQ--QGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCCc--hHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 456788888899988 577899985432 3346788999999999642 3556666664 44567899999999
Q ss_pred CCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcC-------------------------------------------
Q 007680 353 GSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGH------------------------------------------- 389 (593)
Q Consensus 353 gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~------------------------------------------- 389 (593)
.++.+.... .++..+...++.++++.|..||+-.
T Consensus 98 ~~l~~~~~~---~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 174 (306)
T 3tdw_A 98 QILGEDGMA---VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTL 174 (306)
T ss_dssp EECHHHHHT---TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHH
T ss_pred eECchhhhh---hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHH
Confidence 888764221 1455566666666666666666422
Q ss_pred -------------CCCCeEecCCCCCCeeeCC---CCc-EEEEeecccee
Q 007680 390 -------------SSVHIIHCDLKPTNILLDE---NMV-AHVSDFGIYKL 422 (593)
Q Consensus 390 -------------~~~~ivH~Dlkp~NIll~~---~~~-~kL~Dfg~a~~ 422 (593)
....++|+|++|.||+++. ++. +.|+||+.+..
T Consensus 175 ~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 175 RFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 1234799999999999987 455 58999997764
No 409
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.44 E-value=4.5e-08 Score=95.25 Aligned_cols=17 Identities=29% Similarity=0.399 Sum_probs=9.0
Q ss_pred CCCCCcEEEccCCcccc
Q 007680 46 NATKLIVLDLGFNSFSG 62 (593)
Q Consensus 46 ~l~~L~~L~L~~N~l~~ 62 (593)
++++|+.|+|++|+|++
T Consensus 168 ~l~~L~~L~Ls~N~l~~ 184 (267)
T 3rw6_A 168 NIPELLSLNLSNNRLYR 184 (267)
T ss_dssp HCTTCCEEECTTSCCCC
T ss_pred hCCCCCEEECCCCCCCC
Confidence 34555555555555553
No 410
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.44 E-value=2.3e-06 Score=83.71 Aligned_cols=136 Identities=18% Similarity=0.128 Sum_probs=99.1
Q ss_pred ccCccCcc-cEEEEEeC-CCCeEEEEEeehhhHHHHHHHHHHHHHHhhcC-CCCcceeeeeeecCCceEEEEeccCCCCH
Q 007680 279 LLGTSSFG-SVYKGTIS-DGTDVAIKVFNLQLERAFRSFDSECEVLRNVR-HRNLIKILSSYSNPDFKALVLEFMPNGSL 355 (593)
Q Consensus 279 ~lg~G~~g-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~gsL 355 (593)
.+..|..+ .||+.... ++..+++|+-.... ...+.+|...|+.+. +-.+.++++++.+.+..++|||+++|.++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~~---~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~ 107 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGSV---ANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTA 107 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETHH---HHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEH
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCCC---HhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccc
Confidence 45556665 58988765 56789999876542 346788999998884 33467788899899999999999999888
Q ss_pred HHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcC----------------------------------------------
Q 007680 356 EKWLYSHNYFLDILERLNIMIDVGSALEYLHNGH---------------------------------------------- 389 (593)
Q Consensus 356 ~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~---------------------------------------------- 389 (593)
.+...... .....+..+++..|..||.-.
T Consensus 108 ~~~~~~~~-----~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (272)
T 4gkh_A 108 FQVLEEYP-----DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKE 182 (272)
T ss_dssp HHHHHHCG-----GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHH
T ss_pred cccccCCH-----HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHH
Confidence 87654321 233456666777777777310
Q ss_pred --------CCCCeEecCCCCCCeeeCCCCcEEEEeecccee
Q 007680 390 --------SSVHIIHCDLKPTNILLDENMVAHVSDFGIYKL 422 (593)
Q Consensus 390 --------~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~ 422 (593)
....++|+|+.+.||++++++.+-|+||+.+..
T Consensus 183 l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 183 MHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 011278999999999999887778999997653
No 411
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.40 E-value=8e-07 Score=88.02 Aligned_cols=77 Identities=16% Similarity=0.127 Sum_probs=60.8
Q ss_pred ccccccCccCcccEEEEEeCCCCeEEEEEeehhhHHHHHHHHHHHHHHhhcCCC---CcceeeeeeecCCceEEEEeccC
Q 007680 275 NECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHR---NLIKILSSYSNPDFKALVLEFMP 351 (593)
Q Consensus 275 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~~~~~~~lv~e~~~ 351 (593)
...+.|+.|.++.||++...+|+.+++|+...........+..|++.++.+++. .+.+++++. ..++||||++
T Consensus 18 ~~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~ 93 (288)
T 3d1u_A 18 AAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVD 93 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCC
T ss_pred cceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecc
Confidence 345789999999999999888999999997543222235789999999999765 577777763 4689999999
Q ss_pred CCCH
Q 007680 352 NGSL 355 (593)
Q Consensus 352 ~gsL 355 (593)
++++
T Consensus 94 g~~~ 97 (288)
T 3d1u_A 94 ERPP 97 (288)
T ss_dssp CCCC
T ss_pred cCCC
Confidence 9875
No 412
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.37 E-value=9.3e-07 Score=90.63 Aligned_cols=76 Identities=11% Similarity=0.109 Sum_probs=57.2
Q ss_pred ccccccCccCcccEEEEEeCCCCeEEEEEeehhhHHHHHHHHHHHHHHhhcCCCC--cceeeeeeecC-CceEEEEeccC
Q 007680 275 NECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRN--LIKILSSYSNP-DFKALVLEFMP 351 (593)
Q Consensus 275 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~-~~~~lv~e~~~ 351 (593)
...+.++.|....+|+... +++.+++|+.... ..+..|..+++.+.... +.+++++.... +..++||||++
T Consensus 44 ~~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~ 117 (362)
T 3ovc_A 44 SDLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQ 117 (362)
T ss_dssp EEEEEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCC
T ss_pred ceEEECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecC
Confidence 3456789999999999886 5788999987543 25788999999886433 55677766654 66899999998
Q ss_pred CCCHH
Q 007680 352 NGSLE 356 (593)
Q Consensus 352 ~gsL~ 356 (593)
|.++.
T Consensus 118 G~~l~ 122 (362)
T 3ovc_A 118 GVTLQ 122 (362)
T ss_dssp SEETT
T ss_pred CCCcc
Confidence 86553
No 413
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.33 E-value=9.3e-08 Score=88.23 Aligned_cols=108 Identities=14% Similarity=0.145 Sum_probs=80.9
Q ss_pred CCCCCcEEECCCC-cCcc----cCCccCCCCCCCcEEEccCCccccc----ccccccCCCCchhhhhhcceeeccCCccc
Q 007680 22 SLPNIEYLLLTAN-NLTG----TIPNSITNATKLIVLDLGFNSFSGH----ILNTFGNLRHLSVLSLLMFGIRLTGNKLY 92 (593)
Q Consensus 22 ~l~~L~~L~L~~N-~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~l~~n~l~l~~n~l~ 92 (593)
..++|++|+|++| .|+. .+.+.+...++|+.|+|++|.|... +...+...++|++| +|++|.+.
T Consensus 34 ~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L-------~L~~N~i~ 106 (185)
T 1io0_A 34 NDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSL-------NVESNFIS 106 (185)
T ss_dssp TCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEE-------ECCSSCCC
T ss_pred cCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEE-------ECcCCcCC
Confidence 3788999999999 8874 2455677788999999999999743 34456666789988 77777776
Q ss_pred c--------cCCCcccccEEEc--cCCcccCc----CCCCCCCCCCCCEecCCCccCC
Q 007680 93 G--------RIPPCLVLTVLDV--SRNQLSGD----IPSTIGGRVDLETLSLASNQFQ 136 (593)
Q Consensus 93 ~--------~~~~~~~L~~L~l--~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~ 136 (593)
. .+....+|++|+| ++|.|... +...+...++|++|+|++|.+.
T Consensus 107 ~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 107 GSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 2 3444556999999 88998743 2334555688999999999986
No 414
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.32 E-value=3.1e-07 Score=89.31 Aligned_cols=83 Identities=24% Similarity=0.370 Sum_probs=60.9
Q ss_pred EEeeCccccccCChh---hhhCCCCCcEEECCCCcCcc--cCCccCCCCCCCcEEEccCCcccccccccccCCC--Cchh
Q 007680 4 LTLEGNQLSGRLPST---IGHSLPNIEYLLLTANNLTG--TIPNSITNATKLIVLDLGFNSFSGHILNTFGNLR--HLSV 76 (593)
Q Consensus 4 L~Ls~n~l~~~lp~~---~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~--~L~~ 76 (593)
++++.|+.. .++.. +...+++|+.|+|++|+|++ .+|+.+..+++|+.|+|++|+|++. ..+..+. +|++
T Consensus 148 l~l~~N~~~-~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~ 224 (267)
T 3rw6_A 148 IDVVLNRRS-CMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEE 224 (267)
T ss_dssp CCCCTTSHH-HHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSE
T ss_pred ccccCCHHH-HHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcce
Confidence 567778655 44432 22348999999999999997 4456677899999999999999964 3344444 8888
Q ss_pred hhhhcceeeccCCcccccCC
Q 007680 77 LSLLMFGIRLTGNKLYGRIP 96 (593)
Q Consensus 77 L~l~~n~l~l~~n~l~~~~~ 96 (593)
| +|++|.+.+.+|
T Consensus 225 L-------~L~~Npl~~~~~ 237 (267)
T 3rw6_A 225 L-------WLDGNSLCDTFR 237 (267)
T ss_dssp E-------ECTTSTTGGGCS
T ss_pred E-------EccCCcCccccC
Confidence 8 788888876554
No 415
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.29 E-value=9.4e-08 Score=88.20 Aligned_cols=116 Identities=14% Similarity=0.137 Sum_probs=88.5
Q ss_pred cCCccCCCCCCCcEEEccCC-ccccc----ccccccCCCCchhhhhhcceeeccCCcccc--------cCCCcccccEEE
Q 007680 39 TIPNSITNATKLIVLDLGFN-SFSGH----ILNTFGNLRHLSVLSLLMFGIRLTGNKLYG--------RIPPCLVLTVLD 105 (593)
Q Consensus 39 ~~p~~~~~l~~L~~L~L~~N-~l~~~----~p~~~~~l~~L~~L~l~~n~l~l~~n~l~~--------~~~~~~~L~~L~ 105 (593)
.+...+...++|+.|+|++| .|... +...+...++|++| +|++|.+.. .+....+|++|+
T Consensus 27 ~l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L-------~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~ 99 (185)
T 1io0_A 27 TLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKF-------SIVGTRSNDPVAFALAEMLKVNNTLKSLN 99 (185)
T ss_dssp HHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEE-------ECTTSCCCHHHHHHHHHHHHHCSSCCEEE
T ss_pred HHHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEE-------ECcCCCCChHHHHHHHHHHHhCCCcCEEE
Confidence 44556778899999999999 88742 44567778899999 777777752 233345699999
Q ss_pred ccCCcccCc----CCCCCCCCCCCCEecC--CCccCCCC----CCccccCCccccccccccccccC
Q 007680 106 VSRNQLSGD----IPSTIGGRVDLETLSL--ASNQFQGP----IPESVGSLISLESLDLSGNNLSG 161 (593)
Q Consensus 106 l~~N~l~~~----~p~~~~~l~~L~~L~l--~~N~l~~~----~p~~l~~~~~L~~L~l~~N~l~~ 161 (593)
|++|.|... +...+...++|++|+| ++|.|... +...+...++|+.|+|++|.+..
T Consensus 100 L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~~ 165 (185)
T 1io0_A 100 VESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQGP 165 (185)
T ss_dssp CCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHHH
T ss_pred CcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCCh
Confidence 999999743 3456777889999999 88999743 34456667899999999999863
No 416
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.26 E-value=8.9e-07 Score=90.60 Aligned_cols=81 Identities=10% Similarity=-0.021 Sum_probs=56.8
Q ss_pred ccccc-CccCcccEEEEEeC-------CCCeEEEEEeehhhH---HHHHHHHHHHHHHhhcC-C--CCcceeeeeeecC-
Q 007680 276 ECNLL-GTSSFGSVYKGTIS-------DGTDVAIKVFNLQLE---RAFRSFDSECEVLRNVR-H--RNLIKILSSYSNP- 340 (593)
Q Consensus 276 ~~~~l-g~G~~g~Vy~~~~~-------~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~-h--~niv~l~~~~~~~- 340 (593)
..+.| +.|....+|+.... +++.+++|+...... .....+.+|+.+++.+. + -.+.+++.+..+.
T Consensus 24 ~~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~ 103 (357)
T 3ats_A 24 VESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGD 103 (357)
T ss_dssp EEEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSST
T ss_pred EEEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCC
Confidence 34677 88889999998764 267899998654320 01245778889888884 2 3567788877655
Q ss_pred --CceEEEEeccCCCCHH
Q 007680 341 --DFKALVLEFMPNGSLE 356 (593)
Q Consensus 341 --~~~~lv~e~~~~gsL~ 356 (593)
+..++||||++|.++.
T Consensus 104 ~~g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 104 VLGTPFFLMDYVEGVVPP 121 (357)
T ss_dssp TTSSCEEEEECCCCBCCC
T ss_pred ccCCceEEEEecCCCChh
Confidence 3578999999887654
No 417
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.26 E-value=1e-07 Score=97.55 Aligned_cols=144 Identities=16% Similarity=0.212 Sum_probs=97.4
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCC--CCCCCcEEEccC--Cccccc-----cccccc--
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSIT--NATKLIVLDLGF--NSFSGH-----ILNTFG-- 69 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~--~l~~L~~L~L~~--N~l~~~-----~p~~~~-- 69 (593)
|+.|+|++|.-. .+|. + . +++|+.|+|..|.|+......+. .+++|+.|+|+. |...+. +...+.
T Consensus 174 L~~L~L~g~~~l-~l~~-~-~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~ 249 (362)
T 2ra8_A 174 LNNLKIKGTNNL-SIGK-K-P-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKD 249 (362)
T ss_dssp CCEEEEECCBTC-BCCS-C-B-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTT
T ss_pred CcEEEEeCCCCc-eecc-c-c-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcC
Confidence 789999998422 4555 3 3 78999999999998754334443 789999999963 332211 112232
Q ss_pred CCCCchhhhhhcceeeccCCccccc-------CCCcccccEEEccCCcccCc----CCCCCCCCCCCCEecCCCccCCCC
Q 007680 70 NLRHLSVLSLLMFGIRLTGNKLYGR-------IPPCLVLTVLDVSRNQLSGD----IPSTIGGRVDLETLSLASNQFQGP 138 (593)
Q Consensus 70 ~l~~L~~L~l~~n~l~l~~n~l~~~-------~~~~~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~ 138 (593)
.+++|+.| ++.+|.+.+. .+.+..|++|+|+.|.|.+. ++..+..+++|+.|+|++|.|+..
T Consensus 250 ~~p~Lr~L-------~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~ 322 (362)
T 2ra8_A 250 RFPNLKWL-------GIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDE 322 (362)
T ss_dssp TCTTCCEE-------EEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHH
T ss_pred CCCCcCEE-------eCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHH
Confidence 47899999 6666666521 13455799999999999853 344456689999999999998732
Q ss_pred CCccccCCcc-c-ccccccccc
Q 007680 139 IPESVGSLIS-L-ESLDLSGNN 158 (593)
Q Consensus 139 ~p~~l~~~~~-L-~~L~l~~N~ 158 (593)
. ...+.. | ..+++++|+
T Consensus 323 ~---~~~l~~alg~~~~~~~~~ 341 (362)
T 2ra8_A 323 M---KKELQKSLPMKIDVSDSQ 341 (362)
T ss_dssp H---HHHHHHHCCSEEECCSBC
T ss_pred H---HHHHHHHcCCEEEecCCc
Confidence 2 222222 2 457888877
No 418
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=98.05 E-value=1.6e-05 Score=80.41 Aligned_cols=140 Identities=17% Similarity=0.139 Sum_probs=79.7
Q ss_pred ccccCccCcccEEEEEeCCCCeEEEEEeehhhHHHHHHHHHHHHHHhhcC--CCCcceeee------eeecCCceEEEEe
Q 007680 277 CNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVR--HRNLIKILS------SYSNPDFKALVLE 348 (593)
Q Consensus 277 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~l~~------~~~~~~~~~lv~e 348 (593)
.+.|+.|..+.||++...+| .+++|+..... ..+..|..+++.+. .-.+.+++. +....+..+++||
T Consensus 37 ~~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~~----~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~ 111 (346)
T 2q83_A 37 IDVIQGNQMALVWKVHTDSG-AVCLKRIHRPE----KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYD 111 (346)
T ss_dssp EEECC----CEEEEEEETTE-EEEEEEECSCH----HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEE
T ss_pred eeeccccccCcEEEEEeCCC-CEEEEecCCCH----HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEE
Confidence 34566678899999987654 58999987532 23344555555552 112333332 1234567889999
Q ss_pred ccCCCCHH-----H---------HHhh--CCC-----------CCCHHHH------------------------------
Q 007680 349 FMPNGSLE-----K---------WLYS--HNY-----------FLDILER------------------------------ 371 (593)
Q Consensus 349 ~~~~gsL~-----~---------~l~~--~~~-----------~l~~~~~------------------------------ 371 (593)
|++|.++. + .++. ... ...|...
T Consensus 112 ~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 191 (346)
T 2q83_A 112 WIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQE 191 (346)
T ss_dssp CCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred eecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHH
Confidence 99986542 0 1111 000 0122111
Q ss_pred -HHHHHHHHHHHHHHHh--------c-CCCCCeEecCCCCCCeeeCCCCcEEEEeeccce
Q 007680 372 -LNIMIDVGSALEYLHN--------G-HSSVHIIHCDLKPTNILLDENMVAHVSDFGIYK 421 (593)
Q Consensus 372 -~~i~~~i~~~L~~LH~--------~-~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~ 421 (593)
..+..++..++++|++ . .....++|+|+++.||+++.++.+.++||+.+.
T Consensus 192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 192 IDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 0111223445666653 1 014679999999999999888899999999764
No 419
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.95 E-value=4.6e-05 Score=76.00 Aligned_cols=138 Identities=13% Similarity=0.056 Sum_probs=92.7
Q ss_pred cccccCccCcccEEEEEeCCCCeEEEEEeehhhHHHHHHHHHHHHHHhhcC---CCCcceeeeeeecCCceEEEEeccCC
Q 007680 276 ECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVR---HRNLIKILSSYSNPDFKALVLEFMPN 352 (593)
Q Consensus 276 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lv~e~~~~ 352 (593)
..+.|+.|....+|+... +++.+++|+.... ....+..|...|+.+. ...+.+++++....+..++||||+++
T Consensus 40 ~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G 115 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNK 115 (312)
T ss_dssp EEEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCC
T ss_pred eeEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccC
Confidence 356789999999999986 4678899987644 2456888999998883 35688888888888889999999998
Q ss_pred CCHH--------H---HHhhCCC---------------------CCCHHHHH---HHH----------------HHHHHH
Q 007680 353 GSLE--------K---WLYSHNY---------------------FLDILERL---NIM----------------IDVGSA 381 (593)
Q Consensus 353 gsL~--------~---~l~~~~~---------------------~l~~~~~~---~i~----------------~~i~~~ 381 (593)
.++. + .++.... .-+|.+.. ++. ..+...
T Consensus 116 ~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~ 195 (312)
T 3jr1_A 116 SKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQI 195 (312)
T ss_dssp CCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHH
T ss_pred CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHH
Confidence 7542 1 1222110 01343321 111 112222
Q ss_pred H-HHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeec
Q 007680 382 L-EYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFG 418 (593)
Q Consensus 382 L-~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg 418 (593)
+ ..|........++|+|+.+.|++++.++ +.++|+.
T Consensus 196 l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 196 VADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 2 2343222256799999999999999887 8899974
No 420
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.95 E-value=1.9e-05 Score=81.91 Aligned_cols=75 Identities=13% Similarity=0.154 Sum_probs=49.7
Q ss_pred ccccCccCcccEEEEEeC-CCCeEEEEEeehhhH-------HHHHHHHHHHHHHhhcCC--CC-cceeeeeeecCCceEE
Q 007680 277 CNLLGTSSFGSVYKGTIS-DGTDVAIKVFNLQLE-------RAFRSFDSECEVLRNVRH--RN-LIKILSSYSNPDFKAL 345 (593)
Q Consensus 277 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~h--~n-iv~l~~~~~~~~~~~l 345 (593)
.+.+|.|..+.||++... +++.+++|....... ...+.+..|.++++.+.. +. +.+++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 468999999999999754 468899998653211 122456778888888742 33 3345543 3455689
Q ss_pred EEeccCCC
Q 007680 346 VLEFMPNG 353 (593)
Q Consensus 346 v~e~~~~g 353 (593)
|||++++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999764
No 421
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=97.84 E-value=5.1e-05 Score=78.59 Aligned_cols=161 Identities=12% Similarity=-0.033 Sum_probs=93.3
Q ss_pred cEEEeeCccccccCChhhhhCCCCCcEEECCCCcCc---------------------ccCCccCCCCCCCcEEEccCCcc
Q 007680 2 RILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLT---------------------GTIPNSITNATKLIVLDLGFNSF 60 (593)
Q Consensus 2 ~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~---------------------~~~p~~~~~l~~L~~L~L~~N~l 60 (593)
+.+++..| +. .++...+.....|+.+.+.++... .....+|.++.+|+.+.+..|..
T Consensus 188 ~~i~l~~~-~~-~I~~~~F~~~~~L~~i~~~~~~~~i~~~~~~~~~l~~i~ip~~~~~i~~~~f~~~~~l~~~~~~~~~~ 265 (394)
T 4fs7_A 188 KSIKLPRN-LK-IIRDYCFAECILLENMEFPNSLYYLGDFALSKTGVKNIIIPDSFTELGKSVFYGCTDLESISIQNNKL 265 (394)
T ss_dssp CBCCCCTT-CC-EECTTTTTTCTTCCBCCCCTTCCEECTTTTTTCCCCEEEECTTCCEECSSTTTTCSSCCEEEECCTTC
T ss_pred eEEEcCCC-ce-EeCchhhccccccceeecCCCceEeehhhcccCCCceEEECCCceecccccccccccceeEEcCCCcc
Confidence 33444443 44 455555555666666655554332 12223444555555555555443
Q ss_pred cccccccccCCCCchhhhhhcceeeccCCccc-ccCCCcccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCCC
Q 007680 61 SGHILNTFGNLRHLSVLSLLMFGIRLTGNKLY-GRIPPCLVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPI 139 (593)
Q Consensus 61 ~~~~p~~~~~l~~L~~L~l~~n~l~l~~n~l~-~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 139 (593)
. .....|..+..|+.+ ....+.+. ..+..+..|+.+.+.++ ++.+-+.+|.++.+|+.+++.++ ++...
T Consensus 266 ~-i~~~~F~~~~~l~~~-------~~~~~~i~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~ 335 (394)
T 4fs7_A 266 R-IGGSLFYNCSGLKKV-------IYGSVIVPEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIG 335 (394)
T ss_dssp E-ECSCTTTTCTTCCEE-------EECSSEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEEC
T ss_pred e-eecccccccccccee-------ccCceeeccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEh
Confidence 3 344445555555444 22233222 23455666888888765 65455677888888888888754 66455
Q ss_pred CccccCCccccccccccccccCCCCCCCCCCCCCCC
Q 007680 140 PESVGSLISLESLDLSGNNLSGKIPKLEGEIPVKGS 175 (593)
Q Consensus 140 p~~l~~~~~L~~L~l~~N~l~~~~p~~~~~~~~~~~ 175 (593)
..+|.+|.+|+.+++..| ++.+....|..++.+..
T Consensus 336 ~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~ 370 (394)
T 4fs7_A 336 KRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKK 370 (394)
T ss_dssp TTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCE
T ss_pred HHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCE
Confidence 677888888888888766 77666666666554433
No 422
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=97.82 E-value=9.9e-05 Score=76.37 Aligned_cols=151 Identities=12% Similarity=0.026 Sum_probs=94.4
Q ss_pred ccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhhcceeeccCCc
Q 007680 11 LSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLLMFGIRLTGNK 90 (593)
Q Consensus 11 l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~l~~n~ 90 (593)
++ .|+...|.++.+|+.+.|.++ ++.+-..+|.++++|+.++|.+| ++.+...+|.++.+|+.+.+..+-..+...
T Consensus 59 Vt-sIg~~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~l~~i~~~- 134 (394)
T 4fs7_A 59 VV-SIGYAAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLMLKSIGVE- 134 (394)
T ss_dssp EE-EECTTTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTTCCEECTT-
T ss_pred Ee-EhHHHHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCceeeecce-
Confidence 44 566677777899999999854 77566778999999999999866 664566789999999887443221122221
Q ss_pred ccccCCCcccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCCCCccccCCccccccccccccccCCCCCCCCCC
Q 007680 91 LYGRIPPCLVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIPESVGSLISLESLDLSGNNLSGKIPKLEGEI 170 (593)
Q Consensus 91 l~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~l~~N~l~~~~p~~~~~~ 170 (593)
++..+. +..+.+..+ +...-..+|.++.+|+.+.+.++..+ ....+|.++.+|+.+++..| ++.+....+...
T Consensus 135 ---aF~~~~-~~~~~~~~~-~~~i~~~aF~~c~~L~~i~l~~~~~~-I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~ 207 (394)
T 4fs7_A 135 ---AFKGCD-FKEITIPEG-VTVIGDEAFATCESLEYVSLPDSMET-LHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAEC 207 (394)
T ss_dssp ---TTTTCC-CSEEECCTT-CCEECTTTTTTCTTCCEEECCTTCCE-ECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTC
T ss_pred ---eeeccc-ccccccCcc-ccccchhhhcccCCCcEEecCCccce-eccccccCCCCceEEEcCCC-ceEeCchhhccc
Confidence 222222 222222222 22134556777777887777765443 55666777777777777655 444444444444
Q ss_pred CC
Q 007680 171 PV 172 (593)
Q Consensus 171 ~~ 172 (593)
..
T Consensus 208 ~~ 209 (394)
T 4fs7_A 208 IL 209 (394)
T ss_dssp TT
T ss_pred cc
Confidence 33
No 423
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.81 E-value=4.8e-05 Score=75.09 Aligned_cols=79 Identities=18% Similarity=0.171 Sum_probs=57.8
Q ss_pred ccccccccCccCcccEEEEEeCCCCeEEEEEeehhhHHHHHHHHHHHHHHhhcCC---CCcceeeeeeecCCceEEEEec
Q 007680 273 EFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRH---RNLIKILSSYSNPDFKALVLEF 349 (593)
Q Consensus 273 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h---~niv~l~~~~~~~~~~~lv~e~ 349 (593)
+...++.+|.|..+.||+.+..+|+.|++|+...........+..|+..|+.+.. -.+.+++++ +..++||||
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~----~~~~lv~e~ 91 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW----DDRTLAMEW 91 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE----ETTEEEEEC
T ss_pred CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec----cCceEEEEe
Confidence 4555678999999999999999999999998765433333467889999998842 234455554 234789999
Q ss_pred cCCCCH
Q 007680 350 MPNGSL 355 (593)
Q Consensus 350 ~~~gsL 355 (593)
++++..
T Consensus 92 l~~~~~ 97 (288)
T 3f7w_A 92 VDERPP 97 (288)
T ss_dssp CCCCCC
T ss_pred ecccCC
Confidence 987643
No 424
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=97.78 E-value=0.00012 Score=75.18 Aligned_cols=134 Identities=12% Similarity=0.049 Sum_probs=86.0
Q ss_pred CCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhhcceeeccCCccc----ccCCC
Q 007680 22 SLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLLMFGIRLTGNKLY----GRIPP 97 (593)
Q Consensus 22 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~l~~n~l~----~~~~~ 97 (593)
...+|+.+.+..+ ++.....+|.++.+|+.+.+..+ ++.+....|.++.+|+.+ .+..+ +. +.+..
T Consensus 215 ~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i-------~l~~~-i~~i~~~aF~~ 284 (379)
T 4h09_A 215 YGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTL-------NFYAK-VKTVPYLLCSG 284 (379)
T ss_dssp TCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEE-------EECCC-CSEECTTTTTT
T ss_pred cccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhccc-------ccccc-ceecccccccc
Confidence 3566777777655 34355566777777888877766 554555667777777776 33222 21 24555
Q ss_pred cccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCCCCccccCCccccccccccccccCCCCCCC
Q 007680 98 CLVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIPESVGSLISLESLDLSGNNLSGKIPKLE 167 (593)
Q Consensus 98 ~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~l~~N~l~~~~p~~~ 167 (593)
+.+|+.+.+.+|.++.+-+.+|.++.+|+.+.|..+ ++.....+|.+|.+|+.+.+..+ ++.+....|
T Consensus 285 c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I~~~aF 352 (379)
T 4h09_A 285 CSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-ITLIESGAF 352 (379)
T ss_dssp CTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTT
T ss_pred ccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cCEEchhHh
Confidence 666888888777777555677788888888888654 55445567778888888777543 444444433
No 425
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=97.76 E-value=3.4e-05 Score=79.87 Aligned_cols=124 Identities=12% Similarity=0.210 Sum_probs=76.4
Q ss_pred CCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhhcceeeccCCccc----ccCCCccc
Q 007680 25 NIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLLMFGIRLTGNKLY----GRIPPCLV 100 (593)
Q Consensus 25 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~l~~n~l~----~~~~~~~~ 100 (593)
.+..+.+.+ .++..-..+|.++++|+.+.+.++..+ +....|.++.+|+.+ .+. +.+. +++.+|.+
T Consensus 243 ~~~~~~ip~-~v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i-------~l~-~~i~~I~~~aF~~c~~ 312 (394)
T 4gt6_A 243 EDPAFKIPN-GVARIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDI-------EFS-SRITELPESVFAGCIS 312 (394)
T ss_dssp CCSEEECCT-TEEEECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEE-------ECC-TTCCEECTTTTTTCTT
T ss_pred ccceEEcCC-cceEcccceeeecccccEEecccccce-ecCcccccccccccc-------cCC-CcccccCceeecCCCC
Confidence 344444432 233344556777777777777665544 555567777777766 332 1221 24555666
Q ss_pred ccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCCCCccccCCcccccccccccccc
Q 007680 101 LTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIPESVGSLISLESLDLSGNNLS 160 (593)
Q Consensus 101 L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~l~~N~l~ 160 (593)
|+.++|..| ++.+-..+|.++.+|+.+.+..+ ++.....+|.+|.+|+.+++.+|...
T Consensus 313 L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~ 370 (394)
T 4gt6_A 313 LKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQ 370 (394)
T ss_dssp CCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHH
T ss_pred cCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceee
Confidence 777777655 55455667888888888888654 55455667888888888888776543
No 426
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=97.68 E-value=0.00015 Score=74.47 Aligned_cols=126 Identities=11% Similarity=0.053 Sum_probs=97.3
Q ss_pred ccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhhcceeeccCCc
Q 007680 11 LSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLLMFGIRLTGNK 90 (593)
Q Consensus 11 l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~l~~n~ 90 (593)
+. .++...+.+..+|+.+.+..+ ++..-..+|.++.+|+.+.+..+ +.......|.+|.+|+.+ .+.++.
T Consensus 228 ~~-~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i-------~l~~~~ 297 (379)
T 4h09_A 228 VT-TLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKV-------VMDNSA 297 (379)
T ss_dssp CC-EECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEE-------EECCTT
T ss_pred ee-EEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccc-------cccccc
Confidence 44 566666666899999999877 66566778999999999999765 654666689999999998 666665
Q ss_pred cc----ccCCCcccccEEEccCCcccCcCCCCCCCCCCCCEecCCCccCCCCCCccccCCcc
Q 007680 91 LY----GRIPPCLVLTVLDVSRNQLSGDIPSTIGGRVDLETLSLASNQFQGPIPESVGSLIS 148 (593)
Q Consensus 91 l~----~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~~~~ 148 (593)
+. +++.+|.+|+.+.|..+ ++.+-..+|.++.+|+.+.+..+ ++..-..+|.++..
T Consensus 298 i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I~~~aF~~c~~ 357 (379)
T 4h09_A 298 IETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-ITLIESGAFEGSSI 357 (379)
T ss_dssp CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTSSC
T ss_pred cceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cCEEchhHhhCCCC
Confidence 54 46677888999999866 76566788999999999999765 65455667777643
No 427
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.64 E-value=0.00016 Score=75.50 Aligned_cols=80 Identities=14% Similarity=0.076 Sum_probs=48.1
Q ss_pred CCCeEecCCCCCCeeeCCCCcEEEEeeccceecCCCCCccccccccCCccccCccccCCC---CCCccchHHHHHHHHHH
Q 007680 391 SVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEG---IVSAKCDVYSYGVLLME 467 (593)
Q Consensus 391 ~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~s~~~DvwSlGvvl~e 467 (593)
...++|+|++|.||+++.++ ++++||+.+..-....+-.. ....-...|.+|+..... ......++.+....+|+
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGA-YLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWN 308 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHH-HHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHH-HHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHH
Confidence 45699999999999998876 99999998875321111000 000011346666654311 11223556677888888
Q ss_pred HHhCC
Q 007680 468 TFTRK 472 (593)
Q Consensus 468 lltg~ 472 (593)
.++++
T Consensus 309 ~y~~~ 313 (420)
T 2pyw_A 309 LFNKR 313 (420)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77653
No 428
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.56 E-value=0.00018 Score=71.97 Aligned_cols=157 Identities=10% Similarity=0.103 Sum_probs=87.6
Q ss_pred CCHHHHHHhhhcccc-----ccccCccCcccEEEEEeCCCCeEEEEEeehhhHHHHHHHHHHHHHHhhcCCCC--cceee
Q 007680 262 TSYLDIQRATDEFNE-----CNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRN--LIKIL 334 (593)
Q Consensus 262 ~~~~~~~~~~~~~~~-----~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~ 334 (593)
.+..++......|.. .+.|+.|....+|+....+| .+++|+..... ....+..|..+++.+.... +.+++
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~~~ 83 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPL 83 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBC
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCccc
Confidence 344555555555544 34677788889999987655 68899887531 2234566777777773212 23333
Q ss_pred ee------eecCCceEEEEeccCCCCHHH--------------HHhhC--C--CC----C---CHHHHHH----------
Q 007680 335 SS------YSNPDFKALVLEFMPNGSLEK--------------WLYSH--N--YF----L---DILERLN---------- 373 (593)
Q Consensus 335 ~~------~~~~~~~~lv~e~~~~gsL~~--------------~l~~~--~--~~----l---~~~~~~~---------- 373 (593)
.. ....+..+++|+|++|..+.. .++.. . .. . .|.....
T Consensus 84 ~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 163 (322)
T 2ppq_A 84 PRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVE 163 (322)
T ss_dssp CBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTS
T ss_pred CCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhh
Confidence 21 123356789999998864311 01111 0 00 1 1211100
Q ss_pred --HHHHHHHHHHHHHhcC---CCCCeEecCCCCCCeeeCCCCcEEEEeeccce
Q 007680 374 --IMIDVGSALEYLHNGH---SSVHIIHCDLKPTNILLDENMVAHVSDFGIYK 421 (593)
Q Consensus 374 --i~~~i~~~L~~LH~~~---~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~ 421 (593)
+...+...++++++.. ...+++|+|+.+.||+++++..+.++||+.+.
T Consensus 164 ~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 164 KGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp TTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 0112344555555321 13469999999999999987666899999765
No 429
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=97.53 E-value=0.00039 Score=71.81 Aligned_cols=161 Identities=11% Similarity=0.162 Sum_probs=109.4
Q ss_pred CcEEEeeCccccccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCc---------------------
Q 007680 1 MRILTLEGNQLSGRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNS--------------------- 59 (593)
Q Consensus 1 L~~L~Ls~n~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~--------------------- 59 (593)
|+.+.+..+ +. .+....|. -.+|+.+.+..+-.. ....+|.++.+|.......+.
T Consensus 162 L~~i~~~~~-~~-~I~~~aF~-~~~l~~i~ip~~~~~-i~~~af~~c~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (394)
T 4gt6_A 162 LHTVTLPDS-VT-AIEERAFT-GTALTQIHIPAKVTR-IGTNAFSECFALSTITSDSESYPAIDNVLYEKSANGDYALIR 237 (394)
T ss_dssp CCEEECCTT-CC-EECTTTTT-TCCCSEEEECTTCCE-ECTTTTTTCTTCCEEEECCSSSCBSSSCEEEECTTSCEEEEE
T ss_pred cccccccce-ee-Eecccccc-ccceeEEEECCcccc-cccchhhhccccceecccccccccccceeecccccccccccc
Confidence 344555433 55 57777775 467888888766544 556677777777666544322
Q ss_pred ---------------ccccccccccCCCCchhhhhhcceeeccCCccc---ccCCCcccccEEEccCCcccCcCCCCCCC
Q 007680 60 ---------------FSGHILNTFGNLRHLSVLSLLMFGIRLTGNKLY---GRIPPCLVLTVLDVSRNQLSGDIPSTIGG 121 (593)
Q Consensus 60 ---------------l~~~~p~~~~~l~~L~~L~l~~n~l~l~~n~l~---~~~~~~~~L~~L~l~~N~l~~~~p~~~~~ 121 (593)
++..-..+|.++.+|+.+ .+.++... +++..+..|+.+.+. +.++.+...+|.+
T Consensus 238 ~~~~~~~~~~~ip~~v~~i~~~aF~~c~~L~~i-------~lp~~~~~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~ 309 (394)
T 4gt6_A 238 YPSQREDPAFKIPNGVARIETHAFDSCAYLASV-------KMPDSVVSIGTGAFMNCPALQDIEFS-SRITELPESVFAG 309 (394)
T ss_dssp CCTTCCCSEEECCTTEEEECTTTTTTCSSCCEE-------ECCTTCCEECTTTTTTCTTCCEEECC-TTCCEECTTTTTT
T ss_pred cccccccceEEcCCcceEcccceeeecccccEE-------ecccccceecCcccccccccccccCC-CcccccCceeecC
Confidence 221223468888999888 44433222 355667779999997 4566566788999
Q ss_pred CCCCCEecCCCccCCCCCCccccCCccccccccccccccCCCCCCCCCCCCCCC
Q 007680 122 RVDLETLSLASNQFQGPIPESVGSLISLESLDLSGNNLSGKIPKLEGEIPVKGS 175 (593)
Q Consensus 122 l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~l~~N~l~~~~p~~~~~~~~~~~ 175 (593)
+.+|+.+.+..| ++.....+|.+|.+|+.+.+..+ ++.+....|..+..++.
T Consensus 310 c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~ 361 (394)
T 4gt6_A 310 CISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNN 361 (394)
T ss_dssp CTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCE
T ss_pred CCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCE
Confidence 999999999865 66456778999999999999654 77777777776665443
No 430
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.52 E-value=0.00035 Score=70.37 Aligned_cols=141 Identities=12% Similarity=0.070 Sum_probs=74.3
Q ss_pred ccccCccCccc-EEEEEeCCCCeEEEEEeehhhHHHHHHHHHHHHHHhhcCC--CCcceeeeeeecCCceEEEEeccCCC
Q 007680 277 CNLLGTSSFGS-VYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRH--RNLIKILSSYSNPDFKALVLEFMPNG 353 (593)
Q Consensus 277 ~~~lg~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lv~e~~~~g 353 (593)
.+.|+.|.... +|+....+|+.+++|....... ..+..|+.+++.+.. -.+.+++.+....+ +++||++.+.
T Consensus 23 ~~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~ 97 (333)
T 3csv_A 23 RTPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDA 97 (333)
T ss_dssp ECC--------CCEEEECTTCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSC
T ss_pred eeECCCCCCCceEEEEEcCCCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCc
Confidence 35676665554 7787654467788886544321 234556777776632 23555666533333 7899999776
Q ss_pred CHHHHHhhCC-------------------------CCCCHHHHH-------HH-------------HHHHHHHHHHHHh-
Q 007680 354 SLEKWLYSHN-------------------------YFLDILERL-------NI-------------MIDVGSALEYLHN- 387 (593)
Q Consensus 354 sL~~~l~~~~-------------------------~~l~~~~~~-------~i-------------~~~i~~~L~~LH~- 387 (593)
++.+++.... ..++..... .+ ...+...++.+.+
T Consensus 98 ~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~ 177 (333)
T 3csv_A 98 LFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSA 177 (333)
T ss_dssp BHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred chHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHh
Confidence 7655443210 001111100 00 0011112222211
Q ss_pred -cCCCCCeEecCCCCCCeeeCCC----CcEEEEeecccee
Q 007680 388 -GHSSVHIIHCDLKPTNILLDEN----MVAHVSDFGIYKL 422 (593)
Q Consensus 388 -~~~~~~ivH~Dlkp~NIll~~~----~~~kL~Dfg~a~~ 422 (593)
......++|||+.+.||+++.+ +.+.++||+.+..
T Consensus 178 ~~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 178 QLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp HCCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred cccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 0113469999999999999874 6899999998764
No 431
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.51 E-value=9e-05 Score=63.63 Aligned_cols=56 Identities=27% Similarity=0.380 Sum_probs=37.1
Q ss_pred EEEeeCcccc-ccCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCccc
Q 007680 3 ILTLEGNQLS-GRLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNSFS 61 (593)
Q Consensus 3 ~L~Ls~n~l~-~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 61 (593)
.++.++++|+ ..+|..+. ++|+.|+|++|+|+.+.++.|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp---~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP---VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC---TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC---cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 5677777774 24665543 36777777777777555556677777777777777654
No 432
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.47 E-value=0.00017 Score=71.65 Aligned_cols=129 Identities=16% Similarity=0.200 Sum_probs=76.0
Q ss_pred ccccCccCcccEEEEEeCCCCeEEEEEeehhhHHHHHHHHHHHHHHhhcCCCCc-ceeeeeeecCCceEEEEecc-CCCC
Q 007680 277 CNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNL-IKILSSYSNPDFKALVLEFM-PNGS 354 (593)
Q Consensus 277 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~-~~gs 354 (593)
.+.|+.|....+|+. +.+++|+....... .....+|..+++.+....+ .+++++ +.+.-++++||+ +|.+
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~~ 94 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQT 94 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCEE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCcc
Confidence 678999999999998 56889987653221 1123568888877743223 455554 344457899999 6654
Q ss_pred HHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHh-----------------------------------------------
Q 007680 355 LEKWLYSHNYFLDILERLNIMIDVGSALEYLHN----------------------------------------------- 387 (593)
Q Consensus 355 L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~----------------------------------------------- 387 (593)
+...-... ...++.++++.|+-||+
T Consensus 95 l~~~~~~~--------~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 166 (301)
T 3dxq_A 95 MSPEKFKT--------RPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSAL 166 (301)
T ss_dssp CCHHHHHH--------STTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHH
T ss_pred CCHhhHhh--------hHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHH
Confidence 43210000 00011222222222221
Q ss_pred --cCCCCCeEecCCCCCCeeeCCCCcEEEEeecccee
Q 007680 388 --GHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKL 422 (593)
Q Consensus 388 --~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~ 422 (593)
......++|+|+.+.||+ ..++.+.++||..+..
T Consensus 167 ~~~~~~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~ 202 (301)
T 3dxq_A 167 AAHPLPLAACHCDPLCENFL-DTGERMWIVDWEYSGM 202 (301)
T ss_dssp HSSCCCCEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred HhcCCCceeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence 122345899999999999 5666789999998764
No 433
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=97.33 E-value=0.0011 Score=61.31 Aligned_cols=103 Identities=12% Similarity=0.027 Sum_probs=68.9
Q ss_pred CHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEEeeccceecCCCCCccccc
Q 007680 354 SLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNILLDENMVAHVSDFGIYKLLGEGEDSVRQT 433 (593)
Q Consensus 354 sL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~ 433 (593)
+|.+.+...+.++++++++.++.|.+.+|.-+-.+. . -..+=+.|..|++..+|.|...+ +.+.
T Consensus 34 SL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~~--~-~~~~i~~~~~i~l~~dG~V~f~~-~~s~------------ 97 (229)
T 2yle_A 34 SLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARRR--Q-PRHRVRSAAQIRVWRDGAVTLAP-AADD------------ 97 (229)
T ss_dssp EHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTT--C-CCCCCCSGGGEEEETTSCEEECC-C---------------
T ss_pred cHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhcc--c-CCceecCCcceEEecCCceeccc-cccc------------
Confidence 899999999999999999999999999987762110 0 11233456889999999887653 1110
Q ss_pred cccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCC
Q 007680 434 MTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPT 475 (593)
Q Consensus 434 ~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf 475 (593)
.....+.|||... ...+.+.=|||+|+++|..+--..|-
T Consensus 98 --~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~e 136 (229)
T 2yle_A 98 --AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLKE 136 (229)
T ss_dssp -----------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred --ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCCc
Confidence 1223466888753 45677889999999999998755443
No 434
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.27 E-value=0.0033 Score=62.90 Aligned_cols=157 Identities=13% Similarity=0.051 Sum_probs=87.6
Q ss_pred CCHHHHHHhhhcccc-----ccccCccCcccEEEEEeCCCCeEEEEEeehhhHHHHHHHHHHHHHHhhcCC--CCcceee
Q 007680 262 TSYLDIQRATDEFNE-----CNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRH--RNLIKIL 334 (593)
Q Consensus 262 ~~~~~~~~~~~~~~~-----~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~ 334 (593)
.+..++....+.|.+ ...++ |....||++...+|+.+++|+.+... .....+..|..+++.+.. -.+.+++
T Consensus 11 l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~~ 88 (328)
T 1zyl_A 11 LHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPV 88 (328)
T ss_dssp CCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCC
T ss_pred CCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeeccee
Confidence 444555555454432 23466 78889999887777789999987431 123456678888877742 1234444
Q ss_pred ee-----eecCCceEEEEeccCCCCHH-----HH---------Hhh----CC----CCCCHHHH----HHH---------
Q 007680 335 SS-----YSNPDFKALVLEFMPNGSLE-----KW---------LYS----HN----YFLDILER----LNI--------- 374 (593)
Q Consensus 335 ~~-----~~~~~~~~lv~e~~~~gsL~-----~~---------l~~----~~----~~l~~~~~----~~i--------- 374 (593)
.. ....+..+++||+++|.++. .+ ++. .. ...++... ..+
T Consensus 89 ~~~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 168 (328)
T 1zyl_A 89 AFNGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPS 168 (328)
T ss_dssp CBTTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCT
T ss_pred ecCCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCH
Confidence 32 12245567899999875431 11 111 00 01222111 000
Q ss_pred ------HHHHHHHHHHHHhcC---CCCCeEecCCCCCCeeeCCCCcEEEEeecccee
Q 007680 375 ------MIDVGSALEYLHNGH---SSVHIIHCDLKPTNILLDENMVAHVSDFGIYKL 422 (593)
Q Consensus 375 ------~~~i~~~L~~LH~~~---~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~ 422 (593)
...+...++.+.+.. ....++|+|+++.||+++ + .+.++||+.+..
T Consensus 169 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 169 GLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp TTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 011111223332211 134589999999999999 4 899999987654
No 435
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.20 E-value=0.00033 Score=73.23 Aligned_cols=73 Identities=14% Similarity=0.203 Sum_probs=49.5
Q ss_pred ccccCccCcccEEEEEeCC--------CCeEEEEEeehhhHHHHHHHHHHHHHHhhcCCCC-cceeeeeeecCCceEEEE
Q 007680 277 CNLLGTSSFGSVYKGTISD--------GTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRN-LIKILSSYSNPDFKALVL 347 (593)
Q Consensus 277 ~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~lv~ 347 (593)
.+.|+.|....+|++...+ ++.+++|+..... ....+..|..+++.+...+ ..++++.+.+ .+|+
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~--~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~ 151 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE--TESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE 151 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC--CHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC--cHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEE
Confidence 4678889999999998653 5789999884321 1134457888888884333 3566765543 3899
Q ss_pred eccCCCCH
Q 007680 348 EFMPNGSL 355 (593)
Q Consensus 348 e~~~~gsL 355 (593)
||++|.++
T Consensus 152 e~l~G~~l 159 (429)
T 1nw1_A 152 EYIPSRPL 159 (429)
T ss_dssp CCCCEEEC
T ss_pred EEeCCccc
Confidence 99986433
No 436
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.18 E-value=0.0015 Score=66.75 Aligned_cols=141 Identities=12% Similarity=0.159 Sum_probs=83.8
Q ss_pred ccccCccCcccEEEEEeC--------CCCeEEEEEeehhhHHHHHHHHHHHHHHhhcC-CCCcceeeeeeecCCceEEEE
Q 007680 277 CNLLGTSSFGSVYKGTIS--------DGTDVAIKVFNLQLERAFRSFDSECEVLRNVR-HRNLIKILSSYSNPDFKALVL 347 (593)
Q Consensus 277 ~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 347 (593)
.+.+..|-...+|++... +++.+++|+..... .......+|..+++.+. +.-..++++.+.+ .+||
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~-~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~ 129 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAIL-QGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLE 129 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEE
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCcc-chHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEE
Confidence 457888989999999864 24789999864321 22345668999998884 3334566766544 2899
Q ss_pred eccCCCCHHH--------------H---HhhCC----CCCC--HHHHHHHHHHHHH-------------------HHHHH
Q 007680 348 EFMPNGSLEK--------------W---LYSHN----YFLD--ILERLNIMIDVGS-------------------ALEYL 385 (593)
Q Consensus 348 e~~~~gsL~~--------------~---l~~~~----~~l~--~~~~~~i~~~i~~-------------------~L~~L 385 (593)
||++|.+|.. . ++... .... +.++.++..++.. .++.|
T Consensus 130 e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L 209 (379)
T 3feg_A 130 QYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNL 209 (379)
T ss_dssp ECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHH
T ss_pred EEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHH
Confidence 9998765431 1 11111 1122 3445555444321 23333
Q ss_pred ----HhcCCCCCeEecCCCCCCeeeCCC----CcEEEEeecccee
Q 007680 386 ----HNGHSSVHIIHCDLKPTNILLDEN----MVAHVSDFGIYKL 422 (593)
Q Consensus 386 ----H~~~~~~~ivH~Dlkp~NIll~~~----~~~kL~Dfg~a~~ 422 (593)
........++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 210 ~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 210 RKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 222224569999999999999876 7899999998753
No 437
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.07 E-value=0.0001 Score=66.37 Aligned_cols=89 Identities=11% Similarity=0.034 Sum_probs=63.6
Q ss_pred cCChhhhhCCCCCcEEECCCCcCcccCCccCCCCCCCcEEEccCCc-ccccccccccCC----CCchhhhhhcceeeccC
Q 007680 14 RLPSTIGHSLPNIEYLLLTANNLTGTIPNSITNATKLIVLDLGFNS-FSGHILNTFGNL----RHLSVLSLLMFGIRLTG 88 (593)
Q Consensus 14 ~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l----~~L~~L~l~~n~l~l~~ 88 (593)
.+|..... --+|+.|+|+++.|+..-=..+.++++|+.|+|+++. ++..--..++.+ ++|++| ++++
T Consensus 52 ~LP~~~~~-~~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L-------~Ls~ 123 (176)
T 3e4g_A 52 HLPTGPLD-KYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEM-------EIIS 123 (176)
T ss_dssp GSCCCSTT-CCCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEE-------EEES
T ss_pred cCCcccCC-CceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEE-------EcCC
Confidence 35543322 2479999999999886555567899999999999985 765444456664 468888 7777
Q ss_pred Cc-ccc----cCCCcccccEEEccCCc
Q 007680 89 NK-LYG----RIPPCLVLTVLDVSRNQ 110 (593)
Q Consensus 89 n~-l~~----~~~~~~~L~~L~l~~N~ 110 (593)
+. ++. .+..+.+|++|+|+++.
T Consensus 124 C~~ITD~Gl~~L~~~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 124 CGNVTDKGIIALHHFRNLKYLFLSDLP 150 (176)
T ss_dssp CTTCCHHHHHHGGGCTTCCEEEEESCT
T ss_pred CCcCCHHHHHHHhcCCCCCEEECCCCC
Confidence 54 662 35567779999999985
No 438
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.04 E-value=9.5e-05 Score=67.93 Aligned_cols=114 Identities=11% Similarity=0.091 Sum_probs=61.1
Q ss_pred CCCCcEEECCCC-cCcc----cCCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhhcceeeccCCcccccCCC
Q 007680 23 LPNIEYLLLTAN-NLTG----TIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLLMFGIRLTGNKLYGRIPP 97 (593)
Q Consensus 23 l~~L~~L~L~~N-~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~l~~n~l~~~~~~ 97 (593)
-+.|++|+|++| +|.. .+.+++..-+.|+.|+|++|+|...-...|+. .+..
T Consensus 40 n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~-----------------------aL~~ 96 (197)
T 1pgv_A 40 DTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIE-----------------------LIET 96 (197)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHH-----------------------HHHH
T ss_pred CCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHH-----------------------HHhc
Confidence 456888888875 7753 23455666677888888888877433222221 0111
Q ss_pred cccccEEEccCCcccCc----CCCCCCCCCCCCEecCCCccC---CC----CCCccccCCccccccccccccc
Q 007680 98 CLVLTVLDVSRNQLSGD----IPSTIGGRVDLETLSLASNQF---QG----PIPESVGSLISLESLDLSGNNL 159 (593)
Q Consensus 98 ~~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l---~~----~~p~~l~~~~~L~~L~l~~N~l 159 (593)
...|++|+|++|.|... +-.++..-..|++|+|++|.. .. .+..++..-+.|+.|+++.|.+
T Consensus 97 N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 97 SPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp CSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred CCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCc
Confidence 12356666666665421 112344445577777765432 21 1223445556677777765544
No 439
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=97.01 E-value=0.00047 Score=70.54 Aligned_cols=74 Identities=12% Similarity=0.256 Sum_probs=45.4
Q ss_pred ccccCccCcccEEEEEeCC---------CCeEEEEEeehhhHHHHHHHHHHHHHHhhcCCCC-cceeeeeeecCCceEEE
Q 007680 277 CNLLGTSSFGSVYKGTISD---------GTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRN-LIKILSSYSNPDFKALV 346 (593)
Q Consensus 277 ~~~lg~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~lv 346 (593)
.+.++.|....+|++...+ ++.+++|+....... ......|..+++.+...+ +.++++.. . -++|
T Consensus 38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~-~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v 112 (369)
T 3c5i_A 38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE-LYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRI 112 (369)
T ss_dssp EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG-TSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEE
T ss_pred EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc-eecHHHHHHHHHHHHhcCCCCceEEec--C--CcEE
Confidence 4578888889999998653 268899987653221 112357888888874333 44666544 2 3689
Q ss_pred EeccCCCCH
Q 007680 347 LEFMPNGSL 355 (593)
Q Consensus 347 ~e~~~~gsL 355 (593)
|||++|.++
T Consensus 113 ~e~i~G~~l 121 (369)
T 3c5i_A 113 EEWLYGDPL 121 (369)
T ss_dssp EECCCSEEC
T ss_pred EEEecCCcC
Confidence 999987543
No 440
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.00 E-value=0.00024 Score=64.03 Aligned_cols=88 Identities=11% Similarity=0.116 Sum_probs=64.3
Q ss_pred CCccCCCCCCCcEEEccCCcccccccccccCCCCchhhhhhcceeeccCCc-ccc----cCCCc----ccccEEEccCCc
Q 007680 40 IPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVLSLLMFGIRLTGNK-LYG----RIPPC----LVLTVLDVSRNQ 110 (593)
Q Consensus 40 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~l~~n~-l~~----~~~~~----~~L~~L~l~~N~ 110 (593)
+|.....-.+|+.|||+++.++..--..+.+|++|++| +|+++. +++ .+... .+|++|+|++|.
T Consensus 53 LP~~~~~~~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L-------~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~ 125 (176)
T 3e4g_A 53 LPTGPLDKYKIQAIDATDSCIMSIGFDHMEGLQYVEKI-------RLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCG 125 (176)
T ss_dssp SCCCSTTCCCEEEEEEESCCCCGGGGGGGTTCSCCCEE-------EEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCT
T ss_pred CCcccCCCceEeEEeCcCCCccHHHHHHhcCCCCCCEE-------EeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCC
Confidence 35444344579999999999986555678899999999 777774 552 24442 359999999985
Q ss_pred -ccCcCCCCCCCCCCCCEecCCCcc
Q 007680 111 -LSGDIPSTIGGRVDLETLSLASNQ 134 (593)
Q Consensus 111 -l~~~~p~~~~~l~~L~~L~l~~N~ 134 (593)
|+..-=..+..+++|+.|+|+++.
T Consensus 126 ~ITD~Gl~~L~~~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 126 NVTDKGIIALHHFRNLKYLFLSDLP 150 (176)
T ss_dssp TCCHHHHHHGGGCTTCCEEEEESCT
T ss_pred cCCHHHHHHHhcCCCCCEEECCCCC
Confidence 663322346678999999999986
No 441
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.00 E-value=0.00094 Score=57.17 Aligned_cols=57 Identities=26% Similarity=0.425 Sum_probs=35.1
Q ss_pred cEEEccCCccc-CcCCCCCCCCCCCCEecCCCccCCCCCCccccCCcccccccccccccc
Q 007680 102 TVLDVSRNQLS-GDIPSTIGGRVDLETLSLASNQFQGPIPESVGSLISLESLDLSGNNLS 160 (593)
Q Consensus 102 ~~L~l~~N~l~-~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~l~~N~l~ 160 (593)
..++.+++.|+ ..+|..+. .+|+.|+|++|+|+...++.|..+++|+.|+|++|++.
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 35666666665 23443321 34677777777777555556666777777777777764
No 442
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.82 E-value=0.0012 Score=69.42 Aligned_cols=74 Identities=14% Similarity=0.177 Sum_probs=48.0
Q ss_pred ccccCccCcccEEEEEeCC-CCeEEEEEeehhhHHHHHHHHHHHHHHhhcCCCCc-ceeeeeeecCCceEEEEeccCCCC
Q 007680 277 CNLLGTSSFGSVYKGTISD-GTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNL-IKILSSYSNPDFKALVLEFMPNGS 354 (593)
Q Consensus 277 ~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~~~gs 354 (593)
.+.|+.|-...+|++...+ +..+++|+........ -...+|..+++.+...++ .++++.+. + .+||||++|.+
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~-idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~ 187 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEI-INREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYA 187 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSC-SCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEE
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhh-cCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCcc
Confidence 4678889999999998764 4788999875432111 112578888988864444 46777663 2 35999998754
Q ss_pred H
Q 007680 355 L 355 (593)
Q Consensus 355 L 355 (593)
|
T Consensus 188 l 188 (458)
T 2qg7_A 188 L 188 (458)
T ss_dssp C
T ss_pred C
Confidence 3
No 443
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.73 E-value=0.00032 Score=64.44 Aligned_cols=62 Identities=16% Similarity=0.209 Sum_probs=45.9
Q ss_pred CcEEEeeCc-ccccc----CChhhhhCCCCCcEEECCCCcCcccC----CccCCCCCCCcEEEccCCccccc
Q 007680 1 MRILTLEGN-QLSGR----LPSTIGHSLPNIEYLLLTANNLTGTI----PNSITNATKLIVLDLGFNSFSGH 63 (593)
Q Consensus 1 L~~L~Ls~n-~l~~~----lp~~~~~~l~~L~~L~L~~N~l~~~~----p~~~~~l~~L~~L~L~~N~l~~~ 63 (593)
|+.|+|++| +|... |-+.+.. -+.|+.|+|++|+|+..- .+++..-+.|+.|+|++|+|...
T Consensus 43 L~~L~L~~nn~igd~ga~~la~aL~~-N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~ 113 (197)
T 1pgv_A 43 LKEVNINNMKRVSKERIRSLIEAACN-SKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPE 113 (197)
T ss_dssp CCEEECTTCCSSCHHHHHHHHHHHTT-CSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHH
T ss_pred ccEEECCCCCCCCHHHHHHHHHHHhh-CCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHH
Confidence 688999986 88632 3333433 578999999999998433 33455668899999999999843
No 444
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.68 E-value=0.0059 Score=61.51 Aligned_cols=68 Identities=13% Similarity=0.172 Sum_probs=43.8
Q ss_pred CccCcccEEEEEeCCCCeEEEEEeehhhHHHHHHHHHHHHHHhhcC---CCCcceeeee------eecCCceEEEEeccC
Q 007680 281 GTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVR---HRNLIKILSS------YSNPDFKALVLEFMP 351 (593)
Q Consensus 281 g~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~------~~~~~~~~lv~e~~~ 351 (593)
|.|....||+....+| .+++|+...... ..|+.+++.+. -|.+.+++.. ....+..+++|+|++
T Consensus 32 G~g~~N~vy~v~~~~g-~~vLK~~~~~~~------~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~ 104 (339)
T 3i1a_A 32 GADTNAFAYQADSESK-SYFIKLKYGYHD------EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIH 104 (339)
T ss_dssp TSCSSCEEEEEECSSC-EEEEEEEECSSC------CHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCC
T ss_pred cCccccceEEEEeCCC-CEEEEEecCccc------hHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccC
Confidence 3444689999987766 899998765431 34666666552 1224454432 234567889999999
Q ss_pred CCCH
Q 007680 352 NGSL 355 (593)
Q Consensus 352 ~gsL 355 (593)
|..+
T Consensus 105 G~~~ 108 (339)
T 3i1a_A 105 APNG 108 (339)
T ss_dssp CCBT
T ss_pred CCcC
Confidence 8755
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=96.48 E-value=0.0039 Score=64.03 Aligned_cols=141 Identities=16% Similarity=0.162 Sum_probs=83.7
Q ss_pred ccccCccCcccEEEEEeCC--------CCeEEEEEeehhhHH-----------H-------HHHHHHHHHHHhhcC-CCC
Q 007680 277 CNLLGTSSFGSVYKGTISD--------GTDVAIKVFNLQLER-----------A-------FRSFDSECEVLRNVR-HRN 329 (593)
Q Consensus 277 ~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~-----------~-------~~~~~~E~~~l~~l~-h~n 329 (593)
.+.|..|-...+|++..++ ++.|.+++.-...+. . .+....|..+++.+. +.-
T Consensus 57 v~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi 136 (401)
T 3f2s_A 57 ISVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSL 136 (401)
T ss_dssp EEEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTS
T ss_pred EEEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCC
Confidence 3567778888999998653 367889887543211 0 112235888888884 444
Q ss_pred cceeeeeeecCCceEEEEeccCCCCHHH-------H----------HhhCC----CCCC--HHHHHHHHHHHH-------
Q 007680 330 LIKILSSYSNPDFKALVLEFMPNGSLEK-------W----------LYSHN----YFLD--ILERLNIMIDVG------- 379 (593)
Q Consensus 330 iv~l~~~~~~~~~~~lv~e~~~~gsL~~-------~----------l~~~~----~~l~--~~~~~~i~~~i~------- 379 (593)
..++++++..+ +|+||++|.+|.. . ++... .... +..+.++..++.
T Consensus 137 ~Pkl~~~~~~G----~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~ 212 (401)
T 3f2s_A 137 GPKLYGIFPQG----RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEE 212 (401)
T ss_dssp SCCEEEEETTE----EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSH
T ss_pred CCeEEEEeCCC----eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcch
Confidence 55677776432 8999998754421 0 11111 1122 223333333221
Q ss_pred ---------------HHH----HHHHhcCCCCCeEecCCCCCCeeeCCC------CcEEEEeeccce
Q 007680 380 ---------------SAL----EYLHNGHSSVHIIHCDLKPTNILLDEN------MVAHVSDFGIYK 421 (593)
Q Consensus 380 ---------------~~L----~~LH~~~~~~~ivH~Dlkp~NIll~~~------~~~kL~Dfg~a~ 421 (593)
.-+ ++|...+....++|+|+.+.||+++.+ +.+.++||..+.
T Consensus 213 ~~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 213 SRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 112 233333334569999999999999876 789999998765
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=95.34 E-value=0.026 Score=58.42 Aligned_cols=74 Identities=12% Similarity=0.267 Sum_probs=48.8
Q ss_pred ccccCccCcccEEEEEeCC--------CCeEEEEEeehhhHHHHHHHHHHHHHHhhcC-CCCcceeeeeeecCCceEEEE
Q 007680 277 CNLLGTSSFGSVYKGTISD--------GTDVAIKVFNLQLERAFRSFDSECEVLRNVR-HRNLIKILSSYSNPDFKALVL 347 (593)
Q Consensus 277 ~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 347 (593)
++.+..|-...+|+....+ ++.+++|+....... .-...+|..+++.+. +.-..++++.+. -+.||
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~-~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~I~ 149 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGK-FYDSKVELDVFRYLSNINIAPNIIADFP----EGRIE 149 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-C-CCCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEE
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcch-hcCHHHHHHHHHHHHhcCCCCCEEEEcC----CCEEE
Confidence 4577888889999998753 578999986543211 122357888888874 333445565332 27899
Q ss_pred eccCCCCH
Q 007680 348 EFMPNGSL 355 (593)
Q Consensus 348 e~~~~gsL 355 (593)
||++|.+|
T Consensus 150 efI~G~~l 157 (424)
T 3mes_A 150 EFIDGEPL 157 (424)
T ss_dssp ECCCSEEC
T ss_pred EEeCCccC
Confidence 99998653
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=92.59 E-value=0.071 Score=54.84 Aligned_cols=30 Identities=30% Similarity=0.325 Sum_probs=25.2
Q ss_pred CeEecCCCCCCeee------CCCCcEEEEeecccee
Q 007680 393 HIIHCDLKPTNILL------DENMVAHVSDFGIYKL 422 (593)
Q Consensus 393 ~ivH~Dlkp~NIll------~~~~~~kL~Dfg~a~~ 422 (593)
.++|+|+.+.||++ +++..++++||..|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 36799999999999 4567899999998764
No 448
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=88.88 E-value=0.67 Score=42.61 Aligned_cols=117 Identities=15% Similarity=0.206 Sum_probs=79.6
Q ss_pred CCCCcceeeeeeecCCceEEEEeccCCC-CHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCe
Q 007680 326 RHRNLIKILSSYSNPDFKALVLEFMPNG-SLEKWLYSHNYFLDILERLNIMIDVGSALEYLHNGHSSVHIIHCDLKPTNI 404 (593)
Q Consensus 326 ~h~niv~l~~~~~~~~~~~lv~e~~~~g-sL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~~ivH~Dlkp~NI 404 (593)
.||+.+.. .+-.+.+...+.++.-+.+ ++.. +.. .+..++++++.+|+...++++. -+|--+.|+|+
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-ik~----~~~~eKlr~l~ni~~l~~~~~~------r~tf~L~P~NL 110 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-IKS----FTKNEKLRYLLNIKNLEEVNRT------RYTFVLAPDEL 110 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-GGG----SCHHHHHHHHHHGGGGGGGGGS------SEECCCSGGGE
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHH-HHh----cCHHHHHHHHHHHHHHHHHhcC------ceEEEEecceE
Confidence 58888866 4556666666666554322 2322 332 7789999999999988866663 47889999999
Q ss_pred eeCCCCcEEEEeeccceecCCCCCccccccccCCccccCccccCCCCCCccchHHHHHHHHHHHHhCCCCCCcc
Q 007680 405 LLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVYSYGVLLMETFTRKRPTDEM 478 (593)
Q Consensus 405 ll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlGvvl~elltg~~pf~~~ 478 (593)
+++.++.+++.-.|+-..+ +|. ..+...=.-.+=+++..+++++..|+..
T Consensus 111 ~f~~~~~p~i~~RGik~~l-------------------~P~-----~~~ee~fL~qyKAliiall~~K~~Fe~l 160 (215)
T 4ann_A 111 FFTRDGLPIAKTRGLQNVV-------------------DPL-----PVSEAEFLTRYKALVICAFNEKQSFDAL 160 (215)
T ss_dssp EECTTSCEEESCCEETTTB-------------------SCC-----CCCHHHHHHHHHHHHHHHHCTTCCHHHH
T ss_pred EEcCCCCEEEEEccCccCC-------------------CCC-----CCCHHHHHHHHHHHHHHHHcCCCCHHHH
Confidence 9999999999887753221 121 1111122335778889999999998764
No 449
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=84.81 E-value=2 Score=39.62 Aligned_cols=115 Identities=10% Similarity=0.078 Sum_probs=78.5
Q ss_pred CCCCcceeeeeeecCCceEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHH-HHHhcCCCCCeEecCCCCCCe
Q 007680 326 RHRNLIKILSSYSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALE-YLHNGHSSVHIIHCDLKPTNI 404 (593)
Q Consensus 326 ~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~-~LH~~~~~~~ivH~Dlkp~NI 404 (593)
.||+. -...-.+.+...+.++.-+++.=...+.. .+..++++++.+++.... +++. -+|--+.|+||
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~~----~~~~eKlrll~nl~~L~~~~~~~------r~tf~l~P~NL 115 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIRK----TTLLSRIRAAIHLVSKVKHHSAR------RLIFIVCPENL 115 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHHT----SCHHHHHHHHHHHHHHHSSCCSS------SEECCCCGGGE
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHHh----cCHHHHHHHHHHHHHHHHHhhhC------ceeEEEeCceE
Confidence 57887 44455677777777776544332333433 788999999999888766 5553 67889999999
Q ss_pred eeCCCCcEEEEeeccceecCCCCCccccccccCCccccCccccCCCCCCccchHH-HHHHHHHHHHhCCCCCCc
Q 007680 405 LLDENMVAHVSDFGIYKLLGEGEDSVRQTMTMATIGYMAPEYGLEGIVSAKCDVY-SYGVLLMETFTRKRPTDE 477 (593)
Q Consensus 405 ll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~Dvw-SlGvvl~elltg~~pf~~ 477 (593)
+++.++.+++.-.|+-.. ++|.- .+ ..|.| .+=+++..++.++..|+.
T Consensus 116 ~f~~~~~p~i~hRGi~~~-------------------lpP~e-----~~-ee~fl~qyKali~all~~K~~Fe~ 164 (219)
T 4ano_A 116 MFNRALEPFFLHVGVKES-------------------LPPDE-----WD-DERLLREVKATVLALTEGEYRFDE 164 (219)
T ss_dssp EECTTCCEEESCCEETTT-------------------BSSCS-----CC-HHHHHHHHHHHHHHHTTCSSCHHH
T ss_pred EEeCCCcEEEEEcCCccc-------------------CCCCC-----CC-HHHHHHHHHHHHHHHHcCCCCHHH
Confidence 999999999988886322 22221 11 22333 577888888999888765
No 450
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=78.39 E-value=0.36 Score=50.50 Aligned_cols=60 Identities=12% Similarity=0.048 Sum_probs=17.5
Q ss_pred ccccccCccCcccEEEEEeCC-CCeEEE------EEeehhh--HHHHHHHHHHHHHHhhcCCCCcceeeeee
Q 007680 275 NECNLLGTSSFGSVYKGTISD-GTDVAI------KVFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSY 337 (593)
Q Consensus 275 ~~~~~lg~G~~g~Vy~~~~~~-~~~vav------K~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 337 (593)
...+.+| ||.||+|.+.. ..+||+ |..+... ......+.+|..++..++|||+++.+++.
T Consensus 145 ~l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~ 213 (463)
T 3cxl_A 145 PIYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFK 213 (463)
T ss_dssp CSTTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEE
T ss_pred cccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceE
Confidence 3456776 99999999753 468888 6655422 22345678899999999999999988765
No 451
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=67.28 E-value=0.99 Score=29.73 Aligned_cols=6 Identities=33% Similarity=0.650 Sum_probs=2.3
Q ss_pred hhhhee
Q 007680 236 MYIRCR 241 (593)
Q Consensus 236 ~~~~~~ 241 (593)
+|+++|
T Consensus 33 ~~~RRR 38 (44)
T 2jwa_A 33 ILIKRR 38 (44)
T ss_dssp HHHHHH
T ss_pred hheehh
Confidence 343433
No 452
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=62.72 E-value=21 Score=34.97 Aligned_cols=141 Identities=16% Similarity=0.099 Sum_probs=74.9
Q ss_pred ccccccccCccCcccEEEEEeCCCCeEEEEEeehhhHHHHHHHHHHHHHHhhcCCCCcceeeee----------------
Q 007680 273 EFNECNLLGTSSFGSVYKGTISDGTDVAIKVFNLQLERAFRSFDSECEVLRNVRHRNLIKILSS---------------- 336 (593)
Q Consensus 273 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~---------------- 336 (593)
++..++....|..| ||.+.. ++..|+||... ....+.+-.++...-.+.-|+..-+.-.
T Consensus 70 ~v~~I~~s~~Gstg-vff~~t-d~~~~VVK~s~---~l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~~~~~ 144 (342)
T 1cja_A 70 QFKGIERSEKGTEG-LFFVET-ESGVFIVKRST---NIESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAAIDK 144 (342)
T ss_dssp GEEEEEECCSTTSC-EEEEEE-SSCEEEEECCT---THHHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHHHCS
T ss_pred CeeEEEeccCCCCC-eEEEEe-CCCEEEEeCcH---HHHHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHHHhhh
Confidence 35556666777655 554444 57889999652 1122334444444444555553222110
Q ss_pred ------eecCCceEEEEeccCCCCHHHHHhhCC-CCCCHHHHHHHHHHH--HHHHHHHHhcCCCCCeEe-cCCCCCCeee
Q 007680 337 ------YSNPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDV--GSALEYLHNGHSSVHIIH-CDLKPTNILL 406 (593)
Q Consensus 337 ------~~~~~~~~lv~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i--~~~L~~LH~~~~~~~ivH-~Dlkp~NIll 406 (593)
........++|||.+|..|.+.-...- ..+... .+.++ +-+++.+.++..+.+.+. ..-.++||++
T Consensus 145 ~~~~l~~l~~~~~~l~meyv~G~~L~e~~~~~~~~~f~~~----~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~ 220 (342)
T 1cja_A 145 SFRVITTLANQANILLMELVRGITLNKLTTTSAPEVLTKS----TMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIML 220 (342)
T ss_dssp SSCHHHHHTTCSEEEEEECCCEEESTTCCSSSHHHHSCHH----HHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEE
T ss_pred hhHHHHHhhcccceehhhhcCCCccccchhhhhhhhcCHH----HHHhhchhheehhhhcCCccCcccccCCCChhheEE
Confidence 001224569999998766544211100 012222 23332 345677776664444332 2357899999
Q ss_pred CCCC-cEEEEeecccee
Q 007680 407 DENM-VAHVSDFGIYKL 422 (593)
Q Consensus 407 ~~~~-~~kL~Dfg~a~~ 422 (593)
++++ .+.++|-+.+..
T Consensus 221 ~~~n~~~~~IDhn~af~ 237 (342)
T 1cja_A 221 SERGATVVPIDSKIIPL 237 (342)
T ss_dssp ESBTTCEEECSCCCCCC
T ss_pred eCCCCeEEEEcCCcccc
Confidence 7655 488999988753
No 453
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=58.10 E-value=12 Score=29.66 Aligned_cols=48 Identities=19% Similarity=0.216 Sum_probs=36.5
Q ss_pred CcccCcCCCCCCCCCCCCEecCCCccCCCCCCccccCCccccccccccc
Q 007680 109 NQLSGDIPSTIGGRVDLETLSLASNQFQGPIPESVGSLISLESLDLSGN 157 (593)
Q Consensus 109 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~l~~N 157 (593)
..++.+-..+|.++.+|+.+.+..+ ++..-..+|.+|.+|+.+.+.+.
T Consensus 6 ~~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 6 EPVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred CccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 3456556678899999999998876 44366778999999999887653
No 454
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=49.89 E-value=2.5e+02 Score=30.38 Aligned_cols=26 Identities=31% Similarity=0.253 Sum_probs=23.2
Q ss_pred ecCCCCCCeeeCCCCcEEEEeeccce
Q 007680 396 HCDLKPTNILLDENMVAHVSDFGIYK 421 (593)
Q Consensus 396 H~Dlkp~NIll~~~~~~kL~Dfg~a~ 421 (593)
=+|=.++|||++.+|.+.=+|||.+-
T Consensus 550 lGDRH~~NILid~tG~v~HIDFG~~f 575 (696)
T 2x6h_A 550 VGDRHLDNLLLTTNGKLFHIDFGYIL 575 (696)
T ss_dssp CCCCCTTTEEECTTSCEEECCCCSCT
T ss_pred CCCCCCcceEEeCCCCEEEEeehhhh
Confidence 46888999999999999999999863
No 455
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=48.77 E-value=17 Score=28.67 Aligned_cols=41 Identities=15% Similarity=0.051 Sum_probs=20.8
Q ss_pred CcccCCccCCCCCCCcEEEccCCcccccccccccCCCCchhh
Q 007680 36 LTGTIPNSITNATKLIVLDLGFNSFSGHILNTFGNLRHLSVL 77 (593)
Q Consensus 36 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 77 (593)
++.+-..+|.++++|+.+.|..+- +.+-..+|.+|.+|+.+
T Consensus 8 vt~I~~~aF~~c~~L~~i~iP~~v-~~Ig~~aF~~C~~L~~i 48 (100)
T 2lz0_A 8 VVGMDKSLFAGNTVIREITVQPNI-GLLYDGMFSGCTALEKL 48 (100)
T ss_dssp CCSSCSCTTTTCTTCCCEEECTTS-SCCCTTSSTTCTTCCCE
T ss_pred cCEecHHHhcCCCCCcEEEcCCch-heEcHHHHhccCCccEE
Confidence 443334455555555555555442 22444455555555555
No 456
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=28.89 E-value=5.5e+02 Score=27.27 Aligned_cols=82 Identities=12% Similarity=0.125 Sum_probs=48.5
Q ss_pred ceeeeeeecCCceEEEEeccCCCCHHHHHhhC----------CC------CCCHHHHHHHHHHHHH--HHHHHHhcCCCC
Q 007680 331 IKILSSYSNPDFKALVLEFMPNGSLEKWLYSH----------NY------FLDILERLNIMIDVGS--ALEYLHNGHSSV 392 (593)
Q Consensus 331 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~----------~~------~l~~~~~~~i~~~i~~--~L~~LH~~~~~~ 392 (593)
++.|.+...+....+ .|++++.++.+.+... .. ...+..+..++..+|- -+.|+=.
T Consensus 402 i~~Y~Vipls~~~Gl-IE~V~~~tl~~il~~~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YILG----- 475 (614)
T 3ls8_A 402 LTPYKVLATSTKHGF-MQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYILG----- 475 (614)
T ss_dssp CCCCCEEESSSSEEE-EECCCCEEHHHHHHHTSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHHT-----
T ss_pred eeccEEEEecCCCce-EEEeCCccHHHHHHccChHHHHHHHhCCCccccccccHHHHHHHHHHHHHHhHhheeee-----
Confidence 344555545444444 5777765555544322 11 1124445555555443 3445531
Q ss_pred CeEecCCCCCCeeeCCCCcEEEEeeccce
Q 007680 393 HIIHCDLKPTNILLDENMVAHVSDFGIYK 421 (593)
Q Consensus 393 ~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~ 421 (593)
=+|=.++|||++.+|++.=+|||.+-
T Consensus 476 ---igDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 476 ---VGDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp ---CCCCCTTSEEECTTSCEEECCCSSCT
T ss_pred ---ccCCCCcceeEcCCCCEeeeehHHhh
Confidence 35778999999999999999999863
Done!